281 c1tndA_ Probab=98.37   E-value=6e-06  Score=52.41  Aligned_columns=182  Identities=18%

Q ss_pred             EEEEEECCCCCCHHHHHHH--HHCCCEEEC--------------------------------------------------
Q ss_conf             7999985999898687877--732320222--------------------------------------------------
Q batch____        13 VNVGTIGHVDHGKTTLTAA--ITTVLAKTY--------------------------------------------------   40 (394)
Q Consensus        13 i~i~i~Ghvd~GKSTL~~~--L~~~~~~~~--------------------------------------------------   40 (394)
                      ++|.++|.-+|||||++..  +++..+...                                                  
T Consensus         4 ikiLlLG~~eSGKST~~KQ~k~i~~~~f~~~E~~~~~~~I~~Nii~~~~~ll~~~~~~~i~~~~~~~~~~~~~~~~~~~~   83 (323)
T c1tndA_           4 VKLLLLGAGESGKSTIVKQMKIIHQDGYSLEECLEFIAIIYGNTLQSILAIVRAMTTLNIQYGDSARQDDARKLMHMADT   83 (323)
T ss_dssp             EEEEEECSTTSSHHHHHHHHHHHHSCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCSSTTHHHHHHHHHHHTTT
T ss_pred             EEEEEECCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCC
T ss_conf             89999738988888999999999678999899998799999999999999999998709998882136879998730134


Q ss_pred             ----------------------------------------------CCCCCCEEEEECCHHHHHCCEEEEEEEEEEECCC
Q ss_conf             ----------------------------------------------6765401332022445306846722279998399
Q batch____        41 ----------------------------------------------GGAARAFDQIDNAPEEKARGITINTSHVEYDTPT   74 (394)
Q Consensus        41 ----------------------------------------------~~~~~~~~~~d~~~~E~~~g~T~~~~~~~~~~~~   74 (394)
                                                                    .+........-....=+-|..|..+....|..++
T Consensus        84 ~~~~~~~~e~~~~I~~LW~d~~iq~~~~r~~e~~l~d~~~YFl~~i~RI~~~~Y~Pt~~Dil~~r~~T~Gi~~~~f~~~~  163 (323)
T c1tndA_          84 IEEGTMPKEMSDIIQRLWKDSGIQACFDRASEYQLNDSAGYYLSDLERLVTPGYVPTEQDVLRSRVKTTGIIETQFSFKD  163 (323)
T ss_dssp             SCTTCCCHHHHHHHHHHHHSHHHHHHHTTGGGSCCCTTHHHHHTTHHHHTSTTCCCCHHHHHHCCCCCCSEEEEEEEETT
T ss_pred             CCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCEEEEEEEECC
T ss_conf             56222598999999998569899999873541042222456676678741545477864458985350241799997357


Q ss_pred             EEEEEECCHHHHHHHHHHHHHHHHCCEEEEEEECCC-----------CCHHHHHHHHHHHHH---CCCCCEEEEEECCCC
Q ss_conf             049873177798899999998642786999996597-----------313678999999997---599709999886214
Q batch____        75 RHYAHVDCPGHADYVKNMITGAAQMDGAILVVAATD-----------GPMPQTREHILLGRQ---VGVPYIIVFLNKCDM  140 (394)
Q Consensus        75 ~~~~~iD~pGh~~~~~~~~~~~~~~d~~ilvv~a~~-----------g~~~~~~e~l~~~~~---~g~~~~Iv~iNK~D~  140 (394)
                      ..+.++|++|.....+.-......+++.++|++..+           .-...+.+.+.-+..   +.-.++++++||+|+
T Consensus       164 ~~~~~~DvgGq~~~R~kW~~~f~~v~~iifvv~lsd~d~~~~e~~~~nrl~esl~~f~~i~~~~~~~~~~iil~lNK~Di  243 (323)
T c1tndA_         164 LNFRMFDVGGQRSERKKWIHCFEGVTCIIFIAALSAYDMVLVEDDEVNRMHESLHLFNSICNHRYFATTSIVLFLNKKDV  243 (323)
T ss_dssp             EEEEEEEECCSHHHHGGGGGGCTTCSEEEEEEEGGGGGCBCSSCTTSBHHHHHHHHHHHHHTCSGGGSCEEEEEEECHHH
T ss_pred             EEEEEEECCCCCCCCHHHHHHHCCCCEEEEEEECHHHCCCCCCCCCCHHHHHHHHHHHHHHCCHHHCCCCEEEEECCHHH
T ss_conf             04889977898743323688736998899997811414422256740358999999999827968779978999325589


Q ss_pred             -----------------CCCHHHHHHHHHHHHHHHHHCCCCC-CCEEEEECCCCCCCCCCCCCCCCHHHHHH
Q ss_conf             -----------------8727889999999999886439760-56689982354776754310000357899
Q batch____       141 -----------------VDDEELLELVEMEVRELLSQYDFPG-DDTPIVRGSALKALEGDAEWEAKILELAG  194 (394)
Q Consensus       141 -----------------~~~~~~~~~i~~~~~~~l~~~~~~~-~~v~iipvSa~~g~n~~~~~~~~~~~l~~  194 (394)
                                       -+++...+.+.-...+++....... ..+-+..++|....|+..........++.
T Consensus       244 f~~Kl~~~~l~~~fp~y~g~~~~~~~~~~i~~~F~~~~~~~~~r~~~~~~t~a~d~~~i~~v~~~v~~~i~~  315 (323)
T c1tndA_         244 FSEKIKKAHLSICFPDYNGPNTYEDAGNYIKVQFLELNMRRDVKEIYSHMTCATDTQNVKFVFDAVTDIIIK  315 (323)
T ss_dssp             HHHHHTTSCGGGTCTTCCSCCCHHHHHHHHHHHHHTTCTTBTTBCCEEEEECTTCHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHCCCCHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEEEHHHHHHHHHHHHHHHHH
T ss_conf             987604488344067889978989999999999998523778973899998511068999999999999999