239 c3snhA_ Probab=99.36   E-value=3e-11  Score=89.58  Aligned_columns=136  Identities=23%

Q ss_pred             CCCEEEEECCCCCCHHHHHHHHHCCCEEEECCCCCEEEEEEEE-------------------------------------
Q ss_conf             8728999749888998999998289705506798604037999-------------------------------------
Q batch____       196 DVPTVSLVGYTNAGKSTLFNRITEARVYAADQLFATLDPTLRR-------------------------------------  238 (426)
Q Consensus       196 ~~~~VaLVG~tNaGKSTLlN~Ltg~~v~v~d~~f~Tld~~~r~-------------------------------------  238 (426)
                      .+|.|++||--++||||++.+|+|..+.+.+.  .|+-|+.-.                                     
T Consensus        25 ~LPqiVVvG~QSsGKSSvlEai~g~~flprg~--~TR~p~~i~l~~~~~~~~~~~~~~~~~~~d~~~i~~~i~~~~~~~~  102 (652)
T c3snhA_          25 DLPQIAVVGGQSAGKSSVLENFVGRDFLPRGS--GTRRPLVLQLVNATTEYAEFLHCKGKKFTDFEEVRLEIEAETDRVT  102 (652)
T ss_dssp             CCCEEEEEECTTCCHHHHHHHHHTSCCSCSSC--CCCSCEEEEEEECSSCEEECTTTCSCCBCCHHHHHHHHHHHHHHTC
T ss_pred             CCCCEEEECCCCCCHHHHHHHHHCCCCCCCCC--CCCCCEEEEEEECCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHH
T ss_conf             89818998889887999988761874277999--7126489999857986078986387542898999999999987641


Q ss_pred             -----------EEECCCEEEEEEECCCEECCCCHHHHHHHHHHHHHHHHCC-EEEEEEECCCCCCHHHHHHHHHHHHHCC
Q ss_conf             -----------9974993899997476231686258999999999987489-8999986888563678999999987405
Q batch____       239 -----------IDVADVGETVLADTVGFIRHLPHDLVAAFKATLQETRQAT-LLLHVIDAADVRVQENIEAVNTVLEEID  306 (426)
Q Consensus       239 -----------i~~~~g~~v~lvDTpGfi~~lp~~l~~~~~~tle~~~~aD-lil~VvDas~~~~~~~~~~~~~il~~l~  306 (426)
                                 +..++-..++|+|+||+++......+...  +...+...+ +||.|++++.+...+.   ...+.++..
T Consensus       103 ~~~s~~~i~l~i~~p~~~~LtlvDLPGl~~~~~~~~i~~l--v~~yi~~~~~IILaV~~a~~D~ans~---~l~lar~~D  177 (652)
T c3snhA_         103 KGISPVPINLRVYSPHVLNLTLVDLPGMTKPDIEFQIRDM--LMQFVTKENCLILAVSPANSDLANSD---ALKVAKEVD  177 (652)
T ss_dssp             CCCCSCCCCCEEEESSSCSEEEEECCCCCCCHHHHHHHHH--HHHHHHSTTEEEEEEEETTSCSTTCH---HHHHHHHHC
T ss_pred             CCCCCCCEEEEEEECCCCCEEEEECCCCCCCCHHHHHHHH--HHHHHCCCCEEEEEEEECCCCHHHHH---HHHHHHHHC
T ss_conf             4778672799995089764178767898757847899999--99982698819999962789876658---999999719


Q ss_pred             CCCCCEEEEEECCCCCCCHHHHHHHHHCCCCC
Q ss_conf             46886599998542788113578888638997
Q batch____       307 AHEIPTLLVMNKIDMLEDFEPRIDRDEENKPN  338 (426)
Q Consensus       307 ~~~~p~IiV~NK~Dl~~~~~~~~~~~~~~~~~  338 (426)
                      ......|.|++|+|++++.............+
T Consensus       178 p~g~RTiGVlTK~Dl~~~g~~~~~il~g~~~~  209 (652)
T c3snhA_         178 PQGQRTIGVITKLDLMDEGTDARDVLENKLLP  209 (652)
T ss_dssp             SSSSSCCCEEECSTTSCTTCCCHHHHTTCSSC
T ss_pred             CCCCCEEEEECCCCCCCCCHHHHHHHCCCCCC
T ss_conf             78881599841501276601289996399864