277 c1nijA_ Probab=98.65   E-value=3.2e-07  Score=64.30  Aligned_columns=149  Identities=15%

Q ss_pred             CCCCEEEEECCCCCCHHHHHHHHHCCC-----EEEECCCCCEE-------EEEEEEEEECCCE-----------------
Q ss_conf             587289997498889989999982897-----05506798604-------0379999974993-----------------
Q batch____       195 ADVPTVSLVGYTNAGKSTLFNRITEAR-----VYAADQLFATL-------DPTLRRIDVADVG-----------------  245 (426)
Q Consensus       195 ~~~~~VaLVG~tNaGKSTLlN~Ltg~~-----v~v~d~~f~Tl-------d~~~r~i~~~~g~-----------------  245 (426)
                      +.+|...|.|+-+||||||+|.|....     +.+.|-.+.+-       +.......+.+|.                 
T Consensus         1 ~~ipv~iitGfLGaGKTTll~~ll~~~~~~~~avi~Nefg~~~iD~~ll~~~~~~v~~l~~GCiCC~~~~~~~~~l~~l~   80 (317)
T c1nijA_           1 NPIAVTLLTGFLGAGKTTLLRHILNEQHGYKIAVIENEFGEVSVDDQLIGDRATQIKTLTNGCICCSRSNELEDALLDLL   80 (317)
T ss_dssp             CCEEEEEEEESSSSSCHHHHHHHHHSCCCCCEEEECSSCCSCCEEEEEECTTSCEEEEETTSCEEECTTSCHHHHHHHHH
T ss_pred             CCCCEEEECCCCCCCHHHHHHHHHHCCCCCEEEEEEECCCCCCHHHHHHHHCCCEEEEECCCCEECCCHHHHHHHHHHHH
T ss_conf             97618998089888988999999842699738999716644420588984079729997799542132477899999999


Q ss_pred             ----------EEEEEECCCEECCCCHHHHHHHHHHHHHHHHCCEEEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCEEEE
Q ss_conf             ----------8999974762316862589999999999874898999986888563678999999987405468865999
Q batch____       246 ----------ETVLADTVGFIRHLPHDLVAAFKATLQETRQATLLLHVIDAADVRVQENIEAVNTVLEEIDAHEIPTLLV  315 (426)
Q Consensus       246 ----------~v~lvDTpGfi~~lp~~l~~~~~~tle~~~~aDlil~VvDas~~~~~~~~~~~~~il~~l~~~~~p~IiV  315 (426)
                                ..+++.|.|+.+..+-...-.....+.....-+.++.|+|++.  .............++..++   ++|
T Consensus        81 ~~~~~~~~~~d~i~IE~sG~a~p~~i~~~l~~~~~l~~~~~l~~vi~vvD~~~--~~~~~~~~~~~~~Qi~~Ad---~iv  155 (317)
T c1nijA_          81 DNLDKGNIQFDRLVIECTGMADPGPIIQTFFSHEVLCQRYLLDGVIALVDAVH--ADEQMNQFTIAQSQVGYAD---RIL  155 (317)
T ss_dssp             HHHHHTSCCCSEEEEEEETTCCHHHHHHHHHHSHHHHHHEEEEEEEEEEETTT--HHHHHHHCHHHHHHHHTCS---EEE
T ss_pred             HHHCCCCCCCCEEEEECCCCCCHHHHHHHHHCCCCCCCEEEEEEEEEEEECHH--HHHHHHHHHHHHHHHHHCC---EEE
T ss_conf             84125546866899808875798999988630820113089801789974026--7776632255644531077---899


Q ss_pred             EECCCCCCCHHHHHHHHHCCCCCEEEEECCCCC
Q ss_conf             985427881135788886389979999767899
Q batch____       316 MNKIDMLEDFEPRIDRDEENKPNRVWLSAQTGA  348 (426)
Q Consensus       316 ~NK~Dl~~~~~~~~~~~~~~~~~~v~vSA~tG~  348 (426)
                      +||+|++++.+..........+..-.+.+..|.
T Consensus       156 lnk~D~~~~~~~i~~~i~~lnP~a~i~~~~~g~  188 (317)
T c1nijA_         156 LTKTDVAGEAEKLHERLARINARAPVYTVTHGD  188 (317)
T ss_dssp             EECTTTCSCTHHHHHHHHHHCSSSCEEECCSSC
T ss_pred             EECCCCCCHHHHHHHHHHHHCCCCEEEEEECCC
T ss_conf             605566898999999997408997799963054