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| Job Description | P0AFF6 | | Confidence | 97.37% | Date | Thu Jan 5 11:26:07 GMT 2012 |
| Rank | 79 | Aligned Residues | 80 |
| % Identity | 20% | Template | c2ja9A_ |
| PDB info |
PDB header:rna-binding protein | Chain: A: PDB Molecule:exosome complex exonuclease rrp40; |
PDBTitle: structure of the n-terminal deletion of yeast exosome2 component rrp40
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| Resolution | 2.20 Å |
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129 | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | |
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| Query Sequence |   |
Q | F | R | E | H | E | G | E | I | I | T | G | V | V | K | K | V | N | R | D | N | I | S | L | D | L | G | N | N | A | E | A | V | I | L | R | E | D | M | L | P | R | . |
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E | N | F | R | P | G | D | R | V | R | G | V | L | Y | S | V | R | P | E | A | R | G | A | Q | L | F | . |
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| Template Sequence |   |
R | Y | I | P | S | V | N | D | F | V | I | G | V | I | I | G | T | F | S | D | S | Y | K | V | S | L | Q | N | F | S | S | S | V | S | L | S | Y | M | A | F | P | N | A | S | K | K | N | R | P | T | L | Q | V | G | D | L | V | Y | A | R | V | C | T | A | E | . |
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| Template Known Secondary structure |   |
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63 | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | |
. | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . |
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197 | . | . | 200 | . | . | . | . | . | . | . | . | . |
| Predicted Secondary structure |   |
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V | T | R | S | K | P | E | M | L | I | E | L | F |
| Query Conservation |   |
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| Alig confidence |   |
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| Template Conservation |   |
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| Template Sequence |   |
G | R | D | A | G | F | G | I | L | E | D | G | M | I | I | D | V | N | L | N | F | A | R | Q | L | L |
| Template Known Secondary structure |   |
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142 | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . |
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No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
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