17/01/2012 06:51:22 : INFO  : Run start: Tue Jan 17 06:51:22 GMT 2012
17/01/2012 06:51:22 : INFO  : Initialised job
17/01/2012 06:51:23 : INFO  : Renaming log file 'phyre2_20120117_065122.log' to '/bmm/www/servers/phyre2/public_html/phyre2_output/f856c782cd83b95c/phyre_20120117_065122.log'
17/01/2012 06:51:23 : INFO  : Initialised job:
Sequence
>batch____
MRVLIVKTSSMGDVLHTLPALTDAQQAIPGIKFDWVVEEGFAQIPSWHAAVERVIPVAIR
RWRKAWFSAPIKAERKAFREALQAENYDAVIDAQGLVKSAALVTRLAHGVKHGMDWQTAR
EPLASLFYNRKHHIAKQQHAVERTRELFAKSLGYSKPQTQGDYAIAQHFLTNLPTDAGEY
AVFLHATTRDDKHWPEEHWRELIGLLADSGIRIKLPWGAPHEEERAKRLAEGFAYVEVLP
KMSLEGVARVLAGAKFVVSVDTGLSHLTAALDRPNITVYGPTDPGLIGGYGKNQMVCRAP
RENLINLNSQAVLEKLSSL

17/01/2012 06:51:23 : INFO  : Checked sequence
17/01/2012 06:51:23 : INFO  : Finding homologues with PSI-BLAST
17/01/2012 06:51:23 : INFO  : PSI-BLAST 3 iterations
17/01/2012 06:53:58 : INFO  : PSI-BLAST 5 iterations
17/01/2012 06:56:37 : INFO  : Finished PSI-BLAST
17/01/2012 06:56:37 : INFO  : Running Buildali to generate a3m file
17/01/2012 07:08:19 : INFO  : Converting to HMM
17/01/2012 07:08:22 : INFO  : Calibrating HMM
17/01/2012 07:08:30 : INFO  : Searching HMM database
17/01/2012 07:14:19 : INFO  : Finished buildali
17/01/2012 07:14:19 : INFO  : Predicting secondary structure
17/01/2012 07:14:19 : INFO  : Predicted secondary structure (PSI-Pred)
17/01/2012 07:14:19 : INFO  : Predicting Disordered regions
17/01/2012 07:14:20 : INFO  : Predicted Disorder (Disopred)
17/01/2012 07:14:20 : INFO  : Running memsat_svm check
17/01/2012 07:16:04 : INFO  : Running memsat_svm full
17/01/2012 07:21:06 : INFO  : Predicted Transmembrane (memsat_svm) ID 'f856c782cd83b95c'
17/01/2012 07:21:07 : INFO  : Initialising fold library search
17/01/2012 07:21:07 : INFO  : Initialised search input
17/01/2012 07:21:07 : INFO  : Building Ensemble models
17/01/2012 07:21:07 : INFO  : Building hh.c2h1fB_.model.1.pdb
17/01/2012 07:21:07 : INFO  : Building c3tovB_.1.pdb
17/01/2012 07:21:08 : INFO  : Building c2h1fB_.2.pdb
17/01/2012 07:21:08 : INFO  : Building d1pswa_.3.pdb
17/01/2012 07:21:08 : INFO  : Building c3ot5D_.4.pdb
17/01/2012 07:21:09 : INFO  : Building d1v4va_.5.pdb
17/01/2012 07:21:09 : INFO  : Building d1o6ca_.6.pdb
17/01/2012 07:21:10 : INFO  : Building d1f6da_.7.pdb
17/01/2012 07:21:10 : INFO  : Building c2gejA_.8.pdb
17/01/2012 07:21:11 : INFO  : Building d1pn3a_.9.pdb
17/01/2012 07:21:11 : INFO  : Building c3dzcA_.10.pdb
17/01/2012 07:21:11 : INFO  : Building c3c4vB_.11.pdb
17/01/2012 07:21:12 : INFO  : Building c3iaaB_.12.pdb
17/01/2012 07:21:12 : INFO  : Building d1f0ka_.13.pdb
17/01/2012 07:21:12 : INFO  : Building d1rrva_.14.pdb
17/01/2012 07:21:13 : INFO  : Building c3othB_.15.pdb
17/01/2012 07:21:13 : INFO  : Building c2p6pB_.16.pdb
17/01/2012 07:21:14 : INFO  : Building c3oy2A_.17.pdb
17/01/2012 07:21:14 : INFO  : Building c2jjmH_.18.pdb
17/01/2012 07:21:15 : INFO  : Building c3hbmA_.19.pdb
17/01/2012 07:21:15 : INFO  : Building d1iira_.20.pdb
17/01/2012 07:21:17 : INFO  : Finished HH model building
17/01/2012 07:21:17 : WARN  : Set python to /bmm/www/servers/phyre2/bin//newpython/python2.6
17/01/2012 07:21:20 : INFO  : html domain output complete ID 'f856c782cd83b95c'
17/01/2012 09:36:07 : INFO  : Run end  : Tue Jan 17 09:36:07 GMT 2012
