250 c1s3sA_ Probab=96.85   E-value=0.0093  Score=35.47  Aligned_columns=109  Identities=21%

Q ss_pred             EEEECCCCEEEEECCCCCCHHHHHHHHHCCCCCCCCEEEECCEECCCCCCCCCCCHHHHHHCCEEEEECCCCCCCCCHHH
Q ss_conf             24687998899986999988999999961578875569987887014577432546768601189962465675445333
Q batch____        22 TLDCPQGETLVLLGPSGAGKSSLLRVLNLLEMPRSGTLNIAGNHFDFTKTPSDKAIRDLRRNVGMVFQQYNLWPHLTVQQ  101 (242)
Q Consensus        22 sl~i~~Ge~~~i~G~nGaGKSTLl~~l~g~~~p~~G~I~~~g~~~~~~~~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~e  101 (242)
                      .+-+.+..-+.+.||.|+||||+++.++.......  +.+++.++........                           
T Consensus       210 ~~g~~~~~~~Ll~Gp~G~GKt~l~~~ia~~~~~~~--~~i~~~~l~~~~~g~~---------------------------  260 (436)
T c1s3sA_         210 AIGVKPPRGILLYGPPGTGKTLIARAVANETGAFF--FLINGPEIMSKLAGES---------------------------  260 (436)
T ss_dssp             HCCCCCCCEEEEECSTTSSHHHHHHHHHHHHTCEE--EEEEHHHHHTSCTTHH---------------------------
T ss_pred             HCCCCCCCEEEEECCCCCCHHHHHHHHHHHCCCCE--EEEEHHHHCCCCCCHH---------------------------
T ss_conf             48899875389867998997899999987449958--9973068700100158---------------------------


Q ss_pred             HHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEEEC----------CCCC
Q ss_conf             223334420599989999999888997598200064554789899999999999741891999957----------8899
Q batch____       102 NLIEAPCRVLGLSKDQALARAEKLLERLRLKPYSDRYPLHLSGGQQQRVAIARALMMEPQVLLFDE----------PTAA  171 (242)
Q Consensus       102 ~i~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LS~G~~~rv~ia~al~~~p~ililDE----------Pt~g  171 (242)
                                                                 ..+-+-.+..|-...|.|+++||          .-+.
T Consensus       261 -------------------------------------------e~~l~~~f~~a~~~~p~ii~lDeid~l~~~~~~~~~~  297 (436)
T c1s3sA_         261 -------------------------------------------ESNLRKAFEEAEKNAPAIIFIDELDAIAPKREKTHGE  297 (436)
T ss_dssp             -------------------------------------------HHHHHHHHHHHHHTCSEEEEEETGGGTCCCSSSCCCT
T ss_pred             -------------------------------------------HHHHHHHHHHHHHCCCCEEEEHHHHHHHCCCCCCCCH
T ss_conf             -------------------------------------------8889999999975099489840000321025788745


Q ss_pred             CCHHHHHHHHHHHHHHHHH-CCEEEEEECCHH
Q ss_conf             9889999999999999872-985999958989
Q batch____       172 LDPEITAQIVSIIRELAET-NITQVIVTHEVE  202 (242)
Q Consensus       172 LD~~~~~~l~~~l~~~~~~-g~tii~isH~~~  202 (242)
                      .+......+...+...... +..+|.+|.+.+
T Consensus       298 ~~~~~~~~~~~~~~~~~~~~~v~vi~tt~~~~  329 (436)
T c1s3sA_         298 VERRIVSQLLTLMDGLKQRAHVIVMAATNRPN  329 (436)
T ss_dssp             THHHHHHHHHHHHHHCCGGGCEEEEEEESCGG
T ss_pred             HHHHHHHHHHHHHCCCCCCCCEEEEEECCCHH
T ss_conf             88999999986430222469879998448958