14/01/2012 05:55:22 : INFO  : Run start: Sat Jan 14 05:55:21 GMT 2012
14/01/2012 05:55:25 : INFO  : Initialised job
14/01/2012 05:55:26 : INFO  : Renaming log file 'phyre2_20120114_055521.log' to '/bmm/www/servers/phyre2/public_html/phyre2_output/f79b410909736b67/phyre_20120114_055521.log'
14/01/2012 05:55:27 : INFO  : Initialised job:
Sequence
>batch____
MMNKSNFEFLKGVNDFTYAIACAAENNYPDDPNTTLIKMRMFGEATAKHLGLLLNIPPCE
NQHDLLRELGKIAFVDDNILSVFHKLRRIGNQAVHEYHNDLNDAQMCLRLGFRLAVWYYR
LVTKDYDFPVPVFVLPERGENLYHQEVLTLKQQLEQQVREKAQTQAEVEAQQQKLVALNG
YIAILEGKQQETEAQTQARLAALEAQLAEKNAELAKQTEQERKAYHKEITDQAIKRTLNL
SEEESRFLIDAQLRKAGWQADSKTLRFSKGARPEPGVNKAIAEWPTGKDETGNQGFADYV
LFVGLKPIAVVEAKRNNIDVPARLNESYRYSKCFDNGFLRETLLEHYSPDEVHEAVPEYE
TSWQDTSGKQRFKIPFCYSTNGREYRATMKTKSGIWYRDVRDTRNMSKALPEWHRPEELL
EMLGSEPQKQNQWFADNPGMSELGLRYYQEDAVRAVEKAIVKGQQEILLAMATGTGKTRT
AIAMMFRLIQSQRFKRILFLVDRRSLGEQALGAFEDTRINGDTFNSIFDIKGLTDKFPED
STKIHVATVQSLVKRTLQSDEPMPVARYDCIVVDEAHRGYILDKEQTEGELQFRSQLDYV
SAYRRILDHFDAVKIALTATPALHTVQIFGEPVYRYTYRTAVIDGFLIDQDPPIQIITRN
AQEGVYLSKGEQVERISPQGEVINDTLEDDQDFEVADFNRGLVIPAFNRAVCNELTNYLD
PTGSQKTLVFCVTNAHADMVVEELRAAFKKKYPQLEHDAIIKITGDADKDARKVQTMITR
FNKERLPNIVVTVDLLTTGVDIPSICNIVFLRKVRSRILYEQMKGRATRLCPEVNKTSFK
IFDCVDIYSTLESVDTMRPVVVRPKVELQTLVNEITDSETYKITEADGRSFAEHSHEQLV
AKLQRIIGLATFNRDRSETIDKQVRRLDELCQDAAGVNFNGFASRLREKGPHWSAEVFNK
LPGFIARLEKLKTDINNLNDAPIFLDIDDEVVSVKSLYGDYDTPQDFLEAFDSLVQRSPN
AQPALQAVINRPRDLTRKGLVELQEWFDRQHFEESSLRKAWKETRNEDIAARLIGHIRRA
AVGDALKPFEERVDHALTRIKGENDWSSEQLSWLDRLAQALKEKVVLDDDVFKTGNFHRR
GGKAMLQRTFDDNLDTLLGKFSDYIWDELA

14/01/2012 05:55:28 : INFO  : Checked sequence
14/01/2012 05:55:30 : INFO  : Finding homologues with PSI-BLAST
14/01/2012 05:55:31 : INFO  : PSI-BLAST 3 iterations
14/01/2012 05:59:39 : INFO  : PSI-BLAST 5 iterations
14/01/2012 06:06:26 : INFO  : Finished PSI-BLAST
14/01/2012 06:06:28 : INFO  : Running Buildali to generate a3m file
14/01/2012 06:43:36 : INFO  : Converting to HMM
14/01/2012 06:44:11 : INFO  : Calibrating HMM
14/01/2012 06:44:43 : INFO  : Searching HMM database
14/01/2012 07:03:57 : INFO  : Finished buildali
14/01/2012 07:03:58 : INFO  : Predicting secondary structure
14/01/2012 07:04:00 : INFO  : Predicted secondary structure (PSI-Pred)
14/01/2012 07:04:01 : INFO  : Predicting Disordered regions
14/01/2012 07:04:02 : INFO  : Predicted Disorder (Disopred)
14/01/2012 07:04:03 : INFO  : Running memsat_svm check
14/01/2012 07:10:53 : INFO  : Globular protein
14/01/2012 07:10:53 : INFO  : Predicted Transmembrane (memsat_svm) ID 'f79b410909736b67'
14/01/2012 07:10:54 : INFO  : Initialising fold library search
14/01/2012 07:10:55 : INFO  : Initialised search input
14/01/2012 07:10:56 : INFO  : Building Ensemble models
14/01/2012 07:10:57 : INFO  : Building hh.c3h1tA_.model.1.pdb
14/01/2012 07:11:02 : INFO  : Building hh.c2w00B_.model.2.pdb
14/01/2012 07:11:06 : INFO  : cpying /bmm/www/servers/phyre2/public_html/phyre2_output/f79b410909736b67/hh.c2w00B_.model.2.pdb to /bmm/www/servers/phyre2/public_html/phyre2_output/f79b410909736b67/c2w00B_.2.pdb
14/01/2012 07:11:08 : INFO  : Building c3h1tA_.1.pdb
14/01/2012 07:11:13 : INFO  : Building c2w00B_.2.pdb
14/01/2012 07:11:18 : INFO  : Building c2w74B_.3.pdb
14/01/2012 07:11:25 : INFO  : Building c2ocaA_.4.pdb
14/01/2012 07:11:29 : INFO  : Building c2xgjA_.5.pdb
14/01/2012 07:11:34 : INFO  : Building c3tmiA_.6.pdb
14/01/2012 07:11:38 : INFO  : Building c1oywA_.7.pdb
14/01/2012 07:11:43 : INFO  : Building c2va8A_.8.pdb
14/01/2012 07:11:48 : INFO  : Building c4a4zA_.9.pdb
14/01/2012 07:11:53 : INFO  : Building c3l9oA_.10.pdb
14/01/2012 07:11:58 : INFO  : Building c2v1xB_.11.pdb
14/01/2012 07:12:03 : INFO  : Building c2zj2A_.12.pdb
14/01/2012 07:12:07 : INFO  : Building c1gm5A_.13.pdb
14/01/2012 07:12:12 : INFO  : Building c2fwrA_.14.pdb
14/01/2012 07:12:17 : INFO  : Building c2eyqA_.15.pdb
14/01/2012 07:12:22 : INFO  : Building c1c4oA_.16.pdb
14/01/2012 07:12:27 : INFO  : Building c1wp9D_.17.pdb
14/01/2012 07:12:31 : INFO  : Building c1z3iX_.18.pdb
14/01/2012 07:12:37 : INFO  : Building c3mwyW_.19.pdb
14/01/2012 07:12:42 : INFO  : Building c2p6uA_.20.pdb
14/01/2012 07:13:06 : INFO  : Finished HH model building
14/01/2012 07:13:06 : WARN  : Set python to /bmm/www/servers/phyre2/bin//newpython/python2.6
14/01/2012 07:13:43 : INFO  : html domain output complete ID 'f79b410909736b67'
14/01/2012 12:25:06 : INFO  : Run end  : Sat Jan 14 12:25:04 GMT 2012
