162 c1vmaA_ Probab=97.70   E-value=0.00058  Score=44.11  Aligned_columns=125  Identities=18%

Q ss_pred             EEEECCCCCCHHHHHHHHHHHHHHCCCCCEEEEECC--CHHHHHHHHHHHHHCCCCCCCEEECCCHHHCCCCCCCCCCCE
Q ss_conf             689678778788999999999995179987999748--289999999999961788661130034022000022678988
Q batch____       467 ILLAMATGTGKTRTAIAMMFRLIQSQRFKRILFLVD--RRSLGEQALGAFEDTRINGDTFNSIFDIKGLTDKFPEDSTKI  544 (1170)
Q Consensus       467 ~Li~maTGsGKT~tai~li~~L~~~~~~krVLflvd--r~~L~~Q~~~~f~~~~~~~~~~~~i~~~~~~~~~~~~~~~~I  544 (1170)
                      ++++-+||+|||-|+..++..+.+.++ +-.|+-+|  |..-.+|...--...+.+.                      .
T Consensus        95 i~~~Gp~G~GKTTt~aklA~~~~~~g~-~v~li~~D~~R~gA~eQL~~~a~~~~v~~----------------------~  151 (294)
T c1vmaA_          95 IMVVGVNGTGKTTSCGKLAKMFVDEGK-SVVLAAADTFRAAAIEQLKIWGERVGATV----------------------I  151 (294)
T ss_dssp             EEEECCTTSSHHHHHHHHHHHHHHTTC-CEEEEEECTTCHHHHHHHHHHHHHHTCEE----------------------E
T ss_pred             EEEEECCCCCHHHHHHHHHHHHHHCCC-CEEEEECCCCCHHHHHHHHHHHHHHCCEE----------------------E
T ss_conf             999806887602489999999996799-48999758768647999999997619828----------------------9


Q ss_pred             EEECHHHHHHHHHHHHCCCCHHHCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECC
Q ss_conf             9985888988765200013500065688407200134530246777543343444699998740159508996137
Q batch____       545 HVATVQSLVKRTLQSDEPMPVARYDCIVVDEAHRGYILDKEQTEGELQFRSQLDYVSAYRRILDHFDAVKIALTAT  620 (1170)
Q Consensus       545 ~i~T~q~l~~~~~~~~~~~~~~~fdlIIiDEaHr~~~~~~~~~~~~~~~~~~~~~~~~~r~il~~fda~~iGLTAT  620 (1170)
                      ...+.+.+...+.+.-.......+|+|+||-+.|+......+..............      ....+..++-++||
T Consensus       152 ~~~~~~~~~~~~~~~~~~~~~~~~d~IlIDTaGr~~~d~~~~~el~~~~~~~~~~~------~~~p~~~~LVl~a~  221 (294)
T c1vmaA_         152 SHSEGADPAAVAFDAVAHALARNKDVVIIDTAGRLHTKKNLMEELRKVHRVVKKKI------PDAPHETLLVIDAT  221 (294)
T ss_dssp             CCSTTCCHHHHHHHHHHHHHHTTCSEEEEEECCCCSCHHHHHHHHHHHHHHGGGTC------TTCCSEEEEEEEGG
T ss_pred             ECCCCCCHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHCC------CCCCCEEEEEEECC
T ss_conf             74883698999999999999779989998188898785799999999999963035------66885399981146