Phyre 2 Results for P39874

Email | l.a.kelley@imperial.ac.uk
Description | P39874
Date | Thu Jan 5 12:01:07 GMT 2012
Unique Job ID | f6ffc3840b002ca6

Detailed template information |

# | Template | Alignment Coverage | 3D Model | Confidence | % i.d. | Template Information
--- | --- | --- | --- | --- | --- | ---
1 | c1emsB_ |
|  | 100.0 | 30 | PDB header:antitumor protein Chain: B: PDB Molecule:nit-fragile histidine triad fusion protein; PDBTitle: crystal structure of the c. elegans nitfhit protein
2 | c2vhiG_ |
|  | 100.0 | 23 | PDB header:hydrolase Chain: G: PDB Molecule:cg3027-pa; PDBTitle: crystal structure of a pyrimidine degrading enzyme from2 drosophila melanogaster
3 | c2w1vA_ |
|  | 100.0 | 26 | PDB header:hydrolase Chain: A: PDB Molecule:nitrilase homolog 2; PDBTitle: crystal structure of mouse nitrilase-2 at 1.4a resolution
4 | d1uf5a_ |
|  | 100.0 | 25 | Fold:Carbon-nitrogen hydrolase Superfamily:Carbon-nitrogen hydrolase Family:Carbamilase
5 | c2e2kC_ |
|  | 100.0 | 19 | PDB header:hydrolase Chain: C: PDB Molecule:formamidase; PDBTitle: helicobacter pylori formamidase amif contains a fine-tuned cysteine-2 glutamate-lysine catalytic triad
6 | c2plqA_ |
|  | 100.0 | 21 | PDB header:hydrolase Chain: A: PDB Molecule:aliphatic amidase; PDBTitle: crystal structure of the amidase from geobacillus pallidus rapc8
7 | d1emsa2 |
|  | 100.0 | 31 | Fold:Carbon-nitrogen hydrolase Superfamily:Carbon-nitrogen hydrolase Family:Nitrilase
8 | c3dlaD_ |
|  | 100.0 | 19 | PDB header:ligase Chain: D: PDB Molecule:glutamine-dependent nad(+) synthetase; PDBTitle: x-ray crystal structure of glutamine-dependent nad+ synthetase from2 mycobacterium tuberculosis bound to naad+ and don
9 | c2e11B_ |
|  | 100.0 | 20 | PDB header:hydrolase Chain: B: PDB Molecule:hydrolase; PDBTitle: the crystal structure of xc1258 from xanthomonas campestris: a cn-2 hydrolase superfamily protein with an arsenic adduct in the active3 site
10 | d1f89a_ |
|  | 100.0 | 25 | Fold:Carbon-nitrogen hydrolase Superfamily:Carbon-nitrogen hydrolase Family:Nitrilase
11 | d1j31a_ |
|  | 100.0 | 25 | Fold:Carbon-nitrogen hydrolase Superfamily:Carbon-nitrogen hydrolase Family:Carbamilase
12 | c3hkxA_ |
|  | 100.0 | 24 | PDB header:hydrolase Chain: A: PDB Molecule:amidase; PDBTitle: crystal structure analysis of an amidase from nesterenkonia sp.
13 | c3n05B_ |
|  | 100.0 | 22 | PDB header:ligase Chain: B: PDB Molecule:nh(3)-dependent nad(+) synthetase; PDBTitle: crystal structure of nh3-dependent nad+ synthetase from streptomyces2 avermitilis
14 | c3ilvA_ |
|  | 100.0 | 16 | PDB header:ligase Chain: A: PDB Molecule:glutamine-dependent nad(+) synthetase; PDBTitle: crystal structure of a glutamine-dependent nad(+) synthetase2 from cytophaga hutchinsonii
15 | c3qxbB_ |
|  | 82.6 | 9 | PDB header:isomerase Chain: B: PDB Molecule:putative xylose isomerase; PDBTitle: crystal structure of a putative xylose isomerase (yp_426450.1) from2 rhodospirillum rubrum atcc 11170 at 1.90 a resolution
16 | c2hk1D_ |
|  | 78.7 | 6 | PDB header:isomerase Chain: D: PDB Molecule:d-psicose 3-epimerase; PDBTitle: crystal structure of d-psicose 3-epimerase (dpease) in the presence of2 d-fructose
17 | d1o60a_ |
|  | 77.1 | 11 | Fold:TIM beta/alpha-barrel Superfamily:Aldolase Family:Class I DAHP synthetase
18 | d1s3la_ |
|  | 70.5 | 6 | Fold:Metallo-dependent phosphatases Superfamily:Metallo-dependent phosphatases Family:YfcE-like
19 | d1d9ea_ |
|  | 70.3 | 18 | Fold:TIM beta/alpha-barrel Superfamily:Aldolase Family:Class I DAHP synthetase
20 | c2qw5B_ |
|  | 69.3 | 11 | PDB header:isomerase Chain: B: PDB Molecule:xylose isomerase-like tim barrel; PDBTitle: crystal structure of a putative sugar phosphate isomerase/epimerase2 (ava4194) from anabaena variabilis atcc 29413 at 1.78 a resolution
21 | c1s3mA_ |
| not modelled | 69.3 | 6 | PDB header:phosphodiesterase Chain: A: PDB Molecule:hypothetical protein mj0936; PDBTitle: structural and functional characterization of a novel2 archaeal phosphodiesterase
22 | c3qfnA_ |
| not modelled | 67.7 | 18 | PDB header:hydrolase Chain: A: PDB Molecule:putative uncharacterized protein; PDBTitle: crystal structure of streptococcal asymmetric ap4a hydrolase and2 phosphodiesterase spr1479/saph in complex with inorganic phosphate
23 | c2zdsB_ |
| not modelled | 61.2 | 7 | PDB header:dna binding protein Chain: B: PDB Molecule:putative dna-binding protein; PDBTitle: crystal structure of sco6571 from streptomyces coelicolor2 a3(2)
24 | d1ydga_ |
| not modelled | 57.0 | 11 | Fold:Flavodoxin-like Superfamily:Flavoproteins Family:WrbA-like
25 | d1uf3a_ |
| not modelled | 56.2 | 28 | Fold:Metallo-dependent phosphatases Superfamily:Metallo-dependent phosphatases Family:TT1561-like
26 | d1vlia2 |
| not modelled | 55.9 | 14 | Fold:TIM beta/alpha-barrel Superfamily:Aldolase Family:NeuB-like
27 | d1su1a_ |
| not modelled | 55.2 | 15 | Fold:Metallo-dependent phosphatases Superfamily:Metallo-dependent phosphatases Family:YfcE-like
28 | c1su1A_ |
| not modelled | 55.2 | 15 | PDB header:structural genomics, unknown function Chain: A: PDB Molecule:hypothetical protein yfce; PDBTitle: structural and biochemical characterization of yfce, a2 phosphoesterase from e. coli
29 | c2ou4C_ |
| not modelled | 51.7 | 12 | PDB header:isomerase Chain: C: PDB Molecule:d-tagatose 3-epimerase; PDBTitle: crystal structure of d-tagatose 3-epimerase from2 pseudomonas cichorii
30 | c3cnyA_ |
| not modelled | 48.8 | 12 | PDB header:biosynthetic protein Chain: A: PDB Molecule:inositol catabolism protein iole; PDBTitle: crystal structure of a putative inositol catabolism protein iole2 (iole, lp_3607) from lactobacillus plantarum wcfs1 at 1.85 a3 resolution
31 | c2nydB_ |
| not modelled | 41.0 | 14 | PDB header:unknown function Chain: B: PDB Molecule:upf0135 protein sa1388; PDBTitle: crystal structure of staphylococcus aureus hypothetical protein sa1388
32 | c3kwsB_ |
| not modelled | 40.8 | 8 | PDB header:isomerase Chain: B: PDB Molecule:putative sugar isomerase; PDBTitle: crystal structure of putative sugar isomerase (yp_001305149.1) from2 parabacteroides distasonis atcc 8503 at 1.68 a resolution
33 | c2ei9A_ |
| not modelled | 40.7 | 17 | PDB header:gene regulation Chain: A: PDB Molecule:non-ltr retrotransposon r1bmks orf2 protein; PDBTitle: crystal structure of r1bm endonuclease domain
34 | c3sz8D_ |
| not modelled | 39.5 | 13 | PDB header:transferase Chain: D: PDB Molecule:2-dehydro-3-deoxyphosphooctonate aldolase 2; PDBTitle: crystal structure of 2-dehydro-3-deoxyphosphooctonate aldolase from2 burkholderia pseudomallei
35 | c3stgA_ |
| not modelled | 38.4 | 15 | PDB header:transferase Chain: A: PDB Molecule:2-dehydro-3-deoxyphosphooctonate aldolase; PDBTitle: crystal structure of a58p, del(n59), and loop 7 truncated mutant of 3-2 deoxy-d-manno-octulosonate 8-phosphate synthase (kdo8ps) from3 neisseria meningitidis
36 | c3o3cD_ |
| not modelled | 38.0 | 12 | PDB header:transferase Chain: D: PDB Molecule:glycogen [starch] synthase isoform 2; PDBTitle: glycogen synthase basal state udp complex
37 | d1o66a_ |
| not modelled | 37.4 | 16 | Fold:TIM beta/alpha-barrel Superfamily:Phosphoenolpyruvate/pyruvate domain Family:Ketopantoate hydroxymethyltransferase PanB
38 | d1i60a_ |
| not modelled | 37.2 | 9 | Fold:TIM beta/alpha-barrel Superfamily:Xylose isomerase-like Family:IolI-like
39 | d1gsaa1 |
| not modelled | 36.4 | 5 | Fold:PreATP-grasp domain Superfamily:PreATP-grasp domain Family:Prokaryotic glutathione synthetase, N-terminal domain
40 | c3ju2A_ |
| not modelled | 35.2 | 17 | PDB header:structural genomics, unknown function Chain: A: PDB Molecule:uncharacterized protein smc04130; PDBTitle: crystal structure of protein smc04130 from sinorhizobium meliloti 1021
41 | c1gshA_ |
| not modelled | 34.6 | 5 | PDB header:glutathione biosynthesis ligase Chain: A: PDB Molecule:glutathione biosynthetic ligase; PDBTitle: structure of escherichia coli glutathione synthetase at ph 7.5
42 | d2nqra3 |
| not modelled | 31.2 | 8 | Fold:Molybdenum cofactor biosynthesis proteins Superfamily:Molybdenum cofactor biosynthesis proteins Family:MoeA central domain-like
43 | d4pgaa_ |
| not modelled | 31.2 | 13 | Fold:Glutaminase/Asparaginase Superfamily:Glutaminase/Asparaginase Family:Glutaminase/Asparaginase
44 | d2q02a1 |
| not modelled | 30.9 | 14 | Fold:TIM beta/alpha-barrel Superfamily:Xylose isomerase-like Family:IolI-like
45 | c3dx5A_ |
| not modelled | 29.6 | 12 | PDB header:lyase Chain: A: PDB Molecule:uncharacterized protein asbf; PDBTitle: crystal structure of the probable 3-dhs dehydratase asbf involved in2 the petrobactin synthesis from bacillus anthracis
46 | d1yx1a1 |
| not modelled | 29.4 | 14 | Fold:TIM beta/alpha-barrel Superfamily:Xylose isomerase-like Family:KguE-like
47 | d1wdua_ |
| not modelled | 28.6 | 20 | Fold:DNase I-like Superfamily:DNase I-like Family:DNase I-like
48 | c2csuB_ |
| not modelled | 28.5 | 11 | PDB header:structural genomics, unknown function Chain: B: PDB Molecule:457aa long hypothetical protein; PDBTitle: crystal structure of ph0766 from pyrococcus horikoshii ot3
49 | d1hd7a_ |
| not modelled | 28.3 | 11 | Fold:DNase I-like Superfamily:DNase I-like Family:DNase I-like
50 | c2zsmA_ |
| not modelled | 28.2 | 25 | PDB header:isomerase Chain: A: PDB Molecule:glutamate-1-semialdehyde 2,1-aminomutase; PDBTitle: crystal structure of glutamate-1-semialdehyde 2,1-2 aminomutase from aeropyrum pernix, hexagonal form
51 | c1vliA_ |
| not modelled | 26.9 | 14 | PDB header:biosynthetic protein Chain: A: PDB Molecule:spore coat polysaccharide biosynthesis protein spse; PDBTitle: crystal structure of spore coat polysaccharide biosynthesis protein2 spse (bsu37870) from bacillus subtilis at 2.38 a resolution
52 | d1nmpa_ |
| not modelled | 26.4 | 12 | Fold:NIF3 (NGG1p interacting factor 3)-like Superfamily:NIF3 (NGG1p interacting factor 3)-like Family:NIF3 (NGG1p interacting factor 3)-like
53 | c3i4jC_ |
| not modelled | 25.7 | 20 | PDB header:transferase Chain: C: PDB Molecule:aminotransferase, class iii; PDBTitle: crystal structure of aminotransferase, class iii from2 deinococcus radiodurans
54 | c2o14A_ |
| not modelled | 24.3 | 9 | PDB header:structural genomics, unknown function Chain: A: PDB Molecule:hypothetical protein yxim; PDBTitle: x-ray crystal structure of protein yxim_bacsu from bacillus2 subtilis. northeast structural genomics consortium target3 sr595
55 | c3pnxF_ |
| not modelled | 23.6 | 10 | PDB header:transferase Chain: F: PDB Molecule:putative sulfurtransferase dsre; PDBTitle: crystal structure of a putative sulfurtransferase dsre (swol_2425)2 from syntrophomonas wolfei str. goettingen at 1.92 a resolution
56 | d1oi7a1 |
| not modelled | 23.6 | 19 | Fold:NAD(P)-binding Rossmann-fold domains Superfamily:NAD(P)-binding Rossmann-fold domains Family:CoA-binding domain
57 | c3pg8B_ |
| not modelled | 22.4 | 13 | PDB header:transferase Chain: B: PDB Molecule:phospho-2-dehydro-3-deoxyheptonate aldolase; PDBTitle: truncated form of 3-deoxy-d-arabino-heptulosonate 7-phosphate synthase2 from thermotoga maritima
58 | d2gx8a1 |
| not modelled | 22.1 | 12 | Fold:NIF3 (NGG1p interacting factor 3)-like Superfamily:NIF3 (NGG1p interacting factor 3)-like Family:NIF3 (NGG1p interacting factor 3)-like
59 | c1zcoA_ |
| not modelled | 21.7 | 15 | PDB header:lyase Chain: A: PDB Molecule:2-dehydro-3-deoxyphosphoheptonate aldolase; PDBTitle: crystal structure of pyrococcus furiosus 3-deoxy-d-arabino-2 heptulosonate 7-phosphate synthase
60 | c1vs1B_ |
| not modelled | 20.7 | 21 | PDB header:transferase Chain: B: PDB Molecule:3-deoxy-7-phosphoheptulonate synthase; PDBTitle: crystal structure of 3-deoxy-d-arabino-heptulosonate-7-2 phosphate synthase (dahp synthase) from aeropyrum pernix3 in complex with mn2+ and pep
61 | c3rqzC_ |
| not modelled | 20.2 | 13 | PDB header:hydrolase Chain: C: PDB Molecule:metallophosphoesterase; PDBTitle: crystal structure of metallophosphoesterase from sphaerobacter2 thermophilus
62 | d1k9vf_ |
| not modelled | 20.0 | 26 | Fold:Flavodoxin-like Superfamily:Class I glutamine amidotransferase-like Family:Class I glutamine amidotransferases (GAT)
63 | d2zdra2 |
| not modelled | 19.9 | 13 | Fold:TIM beta/alpha-barrel Superfamily:Aldolase Family:NeuB-like
64 | c3bleA_ |
| not modelled | 19.7 | 11 | PDB header:transferase Chain: A: PDB Molecule:citramalate synthase from leptospira interrogans; PDBTitle: crystal structure of the catalytic domain of licms in2 complexed with malonate
65 | d2vgna3 |
| not modelled | 19.1 | 15 | Fold:Bacillus chorismate mutase-like Superfamily:L30e-like Family:ERF1/Dom34 C-terminal domain-like
66 | c3cqkB_ |
| not modelled | 18.9 | 11 | PDB header:isomerase Chain: B: PDB Molecule:l-ribulose-5-phosphate 3-epimerase ulae; PDBTitle: crystal structure of l-xylulose-5-phosphate 3-epimerase ulae (form b)2 complex with zn2+ and sulfate
67 | c2wltA_ |
| not modelled | 18.8 | 19 | PDB header:hydrolase Chain: A: PDB Molecule:l-asparaginase; PDBTitle: the crystal structure of helicobacter pylori l-asparaginase2 at 1.4 a resolution
68 | d1s0aa_ |
| not modelled | 18.4 | 24 | Fold:PLP-dependent transferase-like Superfamily:PLP-dependent transferases Family:GABA-aminotransferase-like
69 | c3tebA_ |
| not modelled | 18.2 | 23 | PDB header:hydrolase Chain: A: PDB Molecule:endonuclease/exonuclease/phosphatase; PDBTitle: endonuclease/exonuclease/phosphatase family protein from leptotrichia2 buccalis c-1013-b
70 | d2cfba1 |
| not modelled | 17.8 | 20 | Fold:PLP-dependent transferase-like Superfamily:PLP-dependent transferases Family:GABA-aminotransferase-like
71 | c2d6fA_ |
| not modelled | 17.4 | 16 | PDB header:ligase/rna Chain: A: PDB Molecule:glutamyl-trna(gln) amidotransferase subunit d; PDBTitle: crystal structure of glu-trna(gln) amidotransferase in the2 complex with trna(gln)
72 | d2d6fa2 |
| not modelled | 17.2 | 16 | Fold:Glutaminase/Asparaginase Superfamily:Glutaminase/Asparaginase Family:Glutaminase/Asparaginase
73 | c3lv2A_ |
| not modelled | 17.2 | 19 | PDB header:transferase Chain: A: PDB Molecule:adenosylmethionine-8-amino-7-oxononanoate aminotransferase; PDBTitle: crystal structure of mycobacterium tuberculosis 7,8-diaminopelargonic2 acid synthase in complex with substrate analog sinefungin
74 | c2gx8B_ |
| not modelled | 17.1 | 10 | PDB header:structural genomics, unknown function Chain: B: PDB Molecule:nif3-related protein; PDBTitle: the crystal stucture of bacillus cereus protein related to nif3
75 | c3qc3B_ |
| not modelled | 17.0 | 14 | PDB header:isomerase Chain: B: PDB Molecule:d-ribulose-5-phosphate-3-epimerase; PDBTitle: crystal structure of a d-ribulose-5-phosphate-3-epimerase (np_954699)2 from homo sapiens at 2.20 a resolution
76 | d1ii7a_ |
| not modelled | 16.9 | 13 | Fold:Metallo-dependent phosphatases Superfamily:Metallo-dependent phosphatases Family:DNA double-strand break repair nuclease
77 | c2cy8A_ |
| not modelled | 16.8 | 17 | PDB header:transferase Chain: A: PDB Molecule:d-phenylglycine aminotransferase; PDBTitle: crystal structure of d-phenylglycine aminotransferase (d-phgat) from2 pseudomonas strutzeri st-201
78 | d1o7ja_ |
| not modelled | 16.7 | 19 | Fold:Glutaminase/Asparaginase Superfamily:Glutaminase/Asparaginase Family:Glutaminase/Asparaginase
79 | d1iuka_ |
| not modelled | 15.8 | 9 | Fold:NAD(P)-binding Rossmann-fold domains Superfamily:NAD(P)-binding Rossmann-fold domains Family:CoA-binding domain
80 | d1t70a_ |
| not modelled | 15.7 | 10 | Fold:Metallo-dependent phosphatases Superfamily:Metallo-dependent phosphatases Family:DR1281-like
81 | c3oy2A_ |
| not modelled | 15.7 | 10 | PDB header:viral protein,transferase Chain: A: PDB Molecule:glycosyltransferase b736l; PDBTitle: crystal structure of a putative glycosyltransferase from paramecium2 bursaria chlorella virus ny2a
82 | c3ajxA_ |
| not modelled | 15.0 | 16 | PDB header:lyase Chain: A: PDB Molecule:3-hexulose-6-phosphate synthase; PDBTitle: crystal structure of 3-hexulose-6-phosphate synthase
83 | c3ngfA_ |
| not modelled | 14.4 | 9 | PDB header:isomerase Chain: A: PDB Molecule:ap endonuclease, family 2; PDBTitle: crystal structure of ap endonuclease, family 2 from brucella2 melitensis
84 | c3dodA_ |
| not modelled | 14.3 | 18 | PDB header:transferase Chain: A: PDB Molecule:adenosylmethionine-8-amino-7-oxononanoate aminotransferase; PDBTitle: crystal structure of plp bound 7,8-diaminopelargonic acid synthase in2 bacillus subtilis
85 | c1zq1B_ |
| not modelled | 14.1 | 17 | PDB header:lyase Chain: B: PDB Molecule:glutamyl-trna(gln) amidotransferase subunit d; PDBTitle: structure of gatde trna-dependent amidotransferase from2 pyrococcus abyssi
86 | d1bxba_ |
| not modelled | 14.0 | 12 | Fold:TIM beta/alpha-barrel Superfamily:Xylose isomerase-like Family:Xylose isomerase
87 | c2yybA_ |
| not modelled | 13.9 | 14 | PDB header:structural genomics, unknown function Chain: A: PDB Molecule:hypothetical protein ttha1606; PDBTitle: crystal structure of ttha1606 from thermus thermophilus hb8
88 | c2zq0B_ |
| not modelled | 13.9 | 10 | PDB header:hydrolase Chain: B: PDB Molecule:alpha-glucosidase (alpha-glucosidase susb); PDBTitle: crystal structure of susb complexed with acarbose
89 | c3ktcB_ |
| not modelled | 13.9 | 12 | PDB header:isomerase Chain: B: PDB Molecule:xylose isomerase; PDBTitle: crystal structure of putative sugar isomerase (yp_050048.1) from2 erwinia carotovora atroseptica scri1043 at 1.54 a resolution
90 | d1zq1a2 |
| not modelled | 13.6 | 17 | Fold:Glutaminase/Asparaginase Superfamily:Glutaminase/Asparaginase Family:Glutaminase/Asparaginase
91 | c3nb0A_ |
| not modelled | 13.6 | 14 | PDB header:transferase Chain: A: PDB Molecule:glycogen [starch] synthase isoform 2; PDBTitle: glucose-6-phosphate activated form of yeast glycogen synthase
92 | c3navB_ |
| not modelled | 13.6 | 8 | PDB header:lyase Chain: B: PDB Molecule:tryptophan synthase alpha chain; PDBTitle: crystal structure of an alpha subunit of tryptophan synthase from2 vibrio cholerae o1 biovar el tor str. n16961
93 | d1bxca_ |
| not modelled | 13.4 | 10 | Fold:TIM beta/alpha-barrel Superfamily:Xylose isomerase-like Family:Xylose isomerase
94 | c3bv0A_ |
| not modelled | 13.3 | 15 | PDB header:transferase Chain: A: PDB Molecule:adenosylmethionine-8-amino-7-oxononanoate aminotransferase; PDBTitle: crystal structure of plp bound 7,8-diaminopelargonic acid synthase in2 mycobacterium tuberculosis
95 | d1nnsa_ |
| not modelled | 13.3 | 22 | Fold:Glutaminase/Asparaginase Superfamily:Glutaminase/Asparaginase Family:Glutaminase/Asparaginase
96 | d2gsaa_ |
| not modelled | 12.6 | 17 | Fold:PLP-dependent transferase-like Superfamily:PLP-dependent transferases Family:GABA-aminotransferase-like
97 | d1h4pa_ |
| not modelled | 12.5 | 13 | Fold:TIM beta/alpha-barrel Superfamily:(Trans)glycosidases Family:beta-glycanases
98 | d2yvta1 |
| not modelled | 12.4 | 19 | Fold:Metallo-dependent phosphatases Superfamily:Metallo-dependent phosphatases Family:TT1561-like
99 | c3ct7E_ |
| not modelled | 12.3 | 32 | PDB header:isomerase Chain: E: PDB Molecule:d-allulose-6-phosphate 3-epimerase; PDBTitle: crystal structure of d-allulose 6-phosphate 3-epimerase2 from escherichia coli k-12