Phyre 2 alignment of P39874 with d1k9vf_

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Job Description | P39874
Confidence | 20.03% | Date | Thu Jan 5 12:01:07 GMT 2012
Rank | 62 | Aligned Residues | 34
% Identity | 26% | Template | d1k9vf_
SCOP info | Flavodoxin-like | Class I glutamine amidotransferase-like | Class I glutamine amidotransferases (GAT)
Resolution | 2.40

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

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Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |
Query Sequence |  | M | L | V | A | A | G | Q | F | A | V | T | S | V | W | E | K | N | A | E | I | C | A | S | L | M | A | Q | A | A | E | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | N | D | A | S | L | F | A | L | P
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | M | R | I | G | I | I | S | V | G | P | . | . | . | . | . | G | N | I | M | N | L | Y | R | G | V | K | R | A | S | E | N | F | E | D | V | S | I | E | L | V | E | S | P | R | N | D | L | Y | D | L | L | F | I | P
Template Known Secondary structure |  |  |  |  |  |  |  |  | S | S | S | . | . | . | . | . | S |  |  |  |  |  |  |  |  |  |  |  |  | T | T | T | S | S | S |  |  |  |  |  |  | S | S | S |  | S |  |  |  | S |  |  |  |  |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 301 | . | . | . | . | . | . | . | . | 310 |  |  |  |  |  | . | . | . | . | . | . | . | . | . | 320 | . | . | . | . | . | . | . | . | . | 330 | . | . | . | . | . | . | . | . | . | 340 | . | . | . | . | . | . | . | . | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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