Phyre 2 alignment of P0AER8 with d1ejxc2

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Job Description | P0AER8
Confidence | 23.41% | Date | Thu Jan 5 11:24:03 GMT 2012
Rank | 4 | Aligned Residues | 30
% Identity | 37% | Template | d1ejxc2
SCOP info | TIM beta/alpha-barrel | Metallo-dependent hydrolases | alpha-subunit of urease, catalytic domain
Resolution | 1.60

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 334 | . | . | . | . | . | 340 | . | . | . | . | . | . | . |  |  |  |  | . | . | 350 | . | . | . | . | . | . | . | . | . | 360 | . | . | . | . | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | D | A | A | V | L | A | A | G | H | C | G | F | G | L | . | . | . | . | G | A | T | P | T | A | I | A | N | M | Q | A | I | T | E | R | F | G
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  | . |  |  |  |  |  |  |  | . |  | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  | . |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | R | E | Q | V | . | A | A | G | V | I | G | L | . | I | H | E | D | W | G | A | T | P | A | A | I | D | C | A | L | T | V | A | D | E | M | D
Template Known Secondary structure |  |  |  |  |  | . |  |  | T |  | S | B |  | . |  | B | G | G | G |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T
Template Predicted Secondary structure |  |  |  |  |  | . |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 1206 | . | . | . |  | 1210 | . | . | . | . | . | . |  | . | . | . | 1220 | . | . | . | . | . | . | . | . | . | 1230 | . | . | . | . | . | . | . | . | .

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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