Phyre 2 alignment of P0AER8 with d2fnaa1

Return to main results | Retrieve Phyre Job Id

Job Description | P0AER8
Confidence | 7.18% | Date | Thu Jan 5 11:24:03 GMT 2012
Rank | 9 | Aligned Residues | 11
% Identity | 36% | Template | d2fnaa1
SCOP info | DNA/RNA-binding 3-helical bundle | "Winged helix" DNA-binding domain | Helicase DNA-binding domain
Resolution | 2.00

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 31 | . | . | . | . | . | . | . | . | 40 | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | K | K | Y | T | I | P | E | P | V | A | G
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | E | K | Y | C | P | S | E | P | L | I | S
Template Known Secondary structure |  | S |  |  |  |  | S | S |  |  |  |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |
|  | 342 | . | . | . | . | . | . | . | 350 | . | .

Download: | Text version | FASTA pairwise alignment | 3D Model in PDB format

View in Jmol

|  | Close Jmol

Send structure to FirstGlance for more viewing options

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys |
Disclaimer
Terms and Conditions