Phyre 2 alignment of P0AER8 with d1u0ka1

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Job Description | P0AER8
Confidence | 2.19% | Date | Thu Jan 5 11:24:03 GMT 2012
Rank | 98 | Aligned Residues | 25
% Identity | 24% | Template | d1u0ka1
SCOP info | Diaminopimelate epimerase-like | Diaminopimelate epimerase-like | PhzC/PhzF-like
Resolution | 1.50

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | G | S | I | T | L | S | G | G | H | G | T | G | A | A | W | S | K | L | F | I | E | R | Y | G | F | T | N
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |
Template Sequence |  | E | E | L | P | F | A | . | G | H | P | L | L | G | A | A | A | L | L | H | . | H | L | R | G | G | D | N
Template Known Secondary structure |  |  | B |  |  | S |  | . |  | T |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  | S | S
Template Predicted Secondary structure |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 68 | . | 70 | . | . | . |  | . | . | . | . | . | . | 80 | . | . | . | . | . |  | . | . | . | . | 90 | . | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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