63 c3kubA_ Probab=100.00  E-value=5.5e-39  Score=268.16  Aligned_columns=294  Identities=22%

Q ss_pred             EEEEEECC-CHHHHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHHHCCCCCCCCCEEECCCEEEECCEEEEEEECC
Q ss_conf             48999767-88889999999838874652899951788889999986400013756674030187689788478877516
Q batch____         3 VRVAINGF-GRIGRNVVRALYESGRRAEITVVAINELADAAGMAHLLKYDTSHGRFAWEVRQERDQLFVGDDAIRVLHER   81 (339)
Q Consensus         3 ikVgInGf-GrIGr~~lR~l~~~~~~~~~evvaInd~~~~~~~ayl~~~Ds~~G~~~~~v~~~~~~l~i~g~~i~v~~~~   81 (339)
                      |||||+|+ |.+|+.++|+|.+|++ +.++++.+                       .+-+..+..+...+..+.+   .
T Consensus         2 ~~V~IvGatG~~G~elirlL~~~~~-p~~~i~~~-----------------------~s~~~~g~~~~~~~~~l~~---~   54 (343)
T c3kubA_           2 LSIGIVGATGQVGQVMRTLLDERDF-PASAVRFF-----------------------ASARSQGRKLAFRGQEIEV---E   54 (343)
T ss_dssp             EEEEEESTTSHHHHHHHHHHHHTTC-CEEEEEEE-----------------------ECSSTTSSEEEETTEEEEE---E
T ss_pred             CEEEEECCCCHHHHHHHHHHHCCCC-CCEEEEEE-----------------------ECCCCCCEEEEECCCCEEE---E
T ss_conf             1899973455789999999854899-72699999-----------------------5451068475303760384---0


Q ss_pred             CCCCCCCCCCCCCEEEECCCCCCCHHHHHHHHHCCCCEE-EEECCCCCCCCCEEEEECCHHHHC--CCCCEEECCCCHHH
Q ss_conf             720087422388889991787435778899973189799-960878886651697304967717--87868844871046
Q batch____        82 SLQSLPWRELGVDVVLDCTGVYGSREHGEAHIAAGAKKV-LFSHPGSNDLDATVVYGVNQDQLR--AEHRIVSNASCTTN  158 (339)
Q Consensus        82 dp~~i~w~~~gvDiVie~TG~~~s~~~a~~hl~~gakkV-iiSAp~~~~~~p~~V~gvN~~~~~--~~~~IIsn~SCtT~  158 (339)
                      +..+.+|.  ++|+||+|+|.+.+++.++.++++|++.| +++++|.+++.|+++||+|++.++  ...++||||+|+++
T Consensus        55 ~~~~~~~~--~~Dvvf~a~p~~~s~~~~~~~~~~g~~VIDlS~~fR~~~d~~~~~pevn~~~~~~~~~~~iIanPgC~~t  132 (343)
T c3kubA_          55 DAETADPS--GLDIALFSAGSAMSKVQAPRFAAAGVTVIDNSSAWRKDPDVPLVVSEVNFERDAHRRPKGIIANPNCTTM  132 (343)
T ss_dssp             ETTTSCCT--TCSEEEECSHHHHHHHHHHHHHHTTCEEEECSSTTTTCTTSCBCCTTTSHHHHTTCCTTSEEECCCHHHH
T ss_pred             CCCCCCCC--CCCEEEECCCCHHHHHHHHHHHHCCCEEEECCCCCCCCCCCEEECCCCCHHHHHHHCCCCEEECCCCHHH
T ss_conf             38700013--9989999498046489999997189879998876555768805506889889874138978883880389


Q ss_pred             HHHHHHHHHHHHCCEEEEEEEEEECCCCCCC------------------------CCCCCCCCCCCCCHHCCCCCCC---
Q ss_conf             7999999998404832789997740578763------------------------3366777654430001032304---
Q batch____       159 CIIPVIKLLDDAYGIESGTVTTIHSAMHDQQ------------------------VIDAYHPDLRRTRAASQSIIPV---  211 (339)
Q Consensus       159 ~lap~lk~L~~~fGI~~~~vtTiha~t~~q~------------------------~~d~~~~d~r~~r~~~~NiIP~---  211 (339)
                      ++++.|+||+++++|+++.++++|++||.++                        .....+....++++.++|+||+   
T Consensus       133 a~~l~L~PL~~~~~i~~i~v~s~sgvSGaG~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~iP~i~~  212 (343)
T c3kubA_         133 AAMPVLKVLHDEARLVRLVVSSYQAVSGSGLAGVAELAEQARAVIGGAEQLVYDGGALEFPPPNTYVAPIAFNVVPLAGS  212 (343)
T ss_dssp             HHHHHHHHHHHHHCEEEEEEEEEBCGGGGCHHHHHHHHHHHHHHGGGGGGGGTCTTSSCCCCCSSSSSCCTTCCBCCCSC
T ss_pred             HHHHHHHHHHHHCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf             99999999997089667999834132767733568877455652065442101233223345321232111231530011


Q ss_pred             -----------CCHHHHHHHHHCCCCCCCEEEEEEEECCCCCCEEEEEEEECCCCCHHHHHHHHHHHHCCCCCCEEEEEC
Q ss_conf             -----------770366888744232673323699811464008999999778789889999999863365488254125
Q batch____       212 -----------DTKLAAGITRFFPQFNDRFEAIAVRVPTINVTAIDLSVTVKKPVKANEVNLLLQKAAQGAFHGIVDYTE  280 (339)
Q Consensus       212 -----------~tg~ak~v~~vlp~l~gki~g~avRVPv~~~s~~dl~v~l~~~~t~eev~~alk~A~~~~l~gil~~~~  280 (339)
                                 +.+...++++||+....+++++|+|||+++||+.+++++++++++.|+++++++++      .-+.+.+
T Consensus       213 ~~~~~~~~~~eE~k~~~E~~~ilg~~~~~i~~t~~~VP~~rG~~~ti~~~~~~~~~~e~i~~~~~~~------~~i~~~~  286 (343)
T c3kubA_         213 LVDDGSGETDEDQKLRFESRKILGIPDLLVSGTCVRVPVFTGHSLSINAEFAQPLSPERARELLDGA------TGVQLVD  286 (343)
T ss_dssp             BCSSSSCCBHHHHHHHHHHHHHHTCTTCEEEEECCBCSCSSCEEEEEEEEESSCCCHHHHHHHHHHC------TTEEECS
T ss_pred             CCCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCEEEEEEEEECCCCCHHHHHHHHHCC------CCCEEEC
T ss_conf             2225542017788999998876067786355689974550438999999958889999999997128------9819943


Q ss_pred             CCEECCCCCCCCCCEE----EECCCCEEECCCEEEEEEEECC-CHHHHHHHHHHHHHHHH
Q ss_conf             6401004168873147----8616317567934999999748-42489999999999864
Q batch____       281 LPLVSVDFNHDPHSAI----VDGTQTRVSGAHLIKTLVWCDN-EWGFANRMLDTTLAMAT  335 (339)
Q Consensus       281 ~~~vS~D~~~~~~s~i----~d~~~~~v~~~~~~k~~~WyDN-E~gys~r~~d~~~~~~~  335 (339)
                      .|-.- +-.|+.+-.|    .|....   +++.+.+++=.|| -+|=|-+-+-.++.|.+
T Consensus       287 ~p~~~-~v~g~n~~~igrir~~~~~~---~~~~~~~~~~~DNL~KGAAgqAVQ~~nlml~  342 (343)
T c3kubA_         287 VPTPL-AAAGVDESLVGRIRRDPGVP---DGRGLALFVSGDNLRKGAALNTIQIAELLTA  342 (343)
T ss_dssp             SCCHH-HHTTCSSEEEEEEEECTTSG---GGCEEEEEEEECTTTTTTHHHHHHHHHHHTC
T ss_pred             CCCCC-CCCCCCCEEEEEEEEEEECC---CCCEEEEEEEEECCCCHHHHHHHHHHHHHHC
T ss_conf             89610-01699835774345532215---7987999998403420247999999988716