Phyre 2 Results for P05706

Email | l.a.kelley@imperial.ac.uk
Description | P05706
Date | Thu Jan 5 10:58:48 GMT 2012
Unique Job ID | f6e897e40f881088

Detailed template information |

# | Template | Alignment Coverage | 3D Model | Confidence | % i.d. | Template Information
--- | --- | --- | --- | --- | --- | ---
1 | d2f9ha1 |
|  | 100.0 | 30 | Fold:PTSIIA/GutA-like Superfamily:PTSIIA/GutA-like Family:PTSIIA/GutA-like
2 | c2xdpA_ |
|  | 74.9 | 13 | PDB header:oxidoreductase Chain: A: PDB Molecule:lysine-specific demethylase 4c; PDBTitle: crystal structure of the tudor domain of human jmjd2c
3 | d1k0ha_ |
|  | 37.8 | 16 | Fold:Phage tail proteins Superfamily:Phage tail proteins Family:gpFII-like
4 | d2gp4a1 |
|  | 37.7 | 18 | Fold:The "swivelling" beta/beta/alpha domain Superfamily:LeuD/IlvD-like Family:IlvD/EDD C-terminal domain-like
5 | c2qqsB_ |
|  | 30.4 | 15 | PDB header:oxidoreductase Chain: B: PDB Molecule:jmjc domain-containing histone demethylation PDBTitle: jmjd2a tandem tudor domains in complex with a trimethylated2 histone h4-k20 peptide
6 | d1p9ka_ |
|  | 27.8 | 20 | Fold:Alpha-L RNA-binding motif Superfamily:Alpha-L RNA-binding motif Family:YbcJ-like
7 | c2jqlA_ |
|  | 27.1 | 17 | PDB header:cell cycle Chain: A: PDB Molecule:dna damage response protein kinase dun1; PDBTitle: nmr structure of the yeast dun1 fha domain in complex with2 a doubly phosphorylated (pt) peptide derived from rad533 scd1
8 | c3vg8F_ |
|  | 26.1 | 41 | PDB header:unknown function Chain: F: PDB Molecule:hypothetical protein tthb210; PDBTitle: crystal structure of hypothetical protein tthb210 from thermus2 thermophilus hb8
9 | c3a5zF_ |
|  | 26.0 | 29 | PDB header:ligase Chain: F: PDB Molecule:elongation factor p; PDBTitle: crystal structure of escherichia coli genx in complex with elongation2 factor p
10 | d1ueba1 |
|  | 23.9 | 14 | Fold:SH3-like barrel Superfamily:Translation proteins SH3-like domain Family:eIF5a N-terminal domain-like
11 | c3cpfB_ |
|  | 23.5 | 12 | PDB header:cell cycle Chain: B: PDB Molecule:eukaryotic translation initiation factor 5a-1; PDBTitle: crystal structure of human eukaryotic translation initiation factor2 eif5a
12 | c2fhdA_ |
|  | 22.9 | 22 | PDB header:cell cycle Chain: A: PDB Molecule:dna repair protein rhp9/crb2; PDBTitle: crystal structure of crb2 tandem tudor domains
13 | d2g50a1 |
|  | 22.2 | 12 | Fold:PK beta-barrel domain-like Superfamily:PK beta-barrel domain-like Family:Pyruvate kinase beta-barrel domain
14 | d2vv5a1 |
|  | 20.9 | 21 | Fold:Sm-like fold Superfamily:Sm-like ribonucleoproteins Family:Mechanosensitive channel protein MscS (YggB), middle domain
15 | d1kzla2 |
|  | 20.8 | 12 | Fold:Reductase/isomerase/elongation factor common domain Superfamily:Riboflavin synthase domain-like Family:Riboflavin synthase
16 | c1xtdA_ |
|  | 20.5 | 18 | PDB header:translation Chain: A: PDB Molecule:eukaryotic initiation factor 5a; PDBTitle: structural analysis of leishmania mexicana eukaryotic initiation2 factor 5a
17 | d2pp6a1 |
|  | 20.5 | 25 | Fold:Phage tail proteins Superfamily:Phage tail proteins Family:gpFII-like
18 | d1k8ga2 |
|  | 20.3 | 13 | Fold:OB-fold Superfamily:Nucleic acid-binding proteins Family:Single strand DNA-binding domain, SSB
19 | d1i8da2 |
|  | 19.2 | 12 | Fold:Reductase/isomerase/elongation factor common domain Superfamily:Riboflavin synthase domain-like Family:Riboflavin synthase
20 | c2fphX_ |
|  | 19.1 | 11 | PDB header:dna binding protein Chain: X: PDB Molecule:ylmh; PDBTitle: cell division protein ylmh from streptococcus pneumoniae
21 | c3hksB_ |
| not modelled | 18.8 | 14 | PDB header:translation, rna binding protein Chain: B: PDB Molecule:eukaryotic translation initiation factor 5a-2; PDBTitle: crystal structure of eukaryotic translation initiation2 factor eif-5a2 from arabidopsis thaliana
22 | c1bkbA_ |
| not modelled | 18.3 | 19 | PDB header:translation Chain: A: PDB Molecule:translation initiation factor 5a; PDBTitle: initiation factor 5a from archebacterium pyrobaculum2 aerophilum
23 | d1liua1 |
| not modelled | 17.3 | 10 | Fold:PK beta-barrel domain-like Superfamily:PK beta-barrel domain-like Family:Pyruvate kinase beta-barrel domain
24 | c3treA_ |
| not modelled | 17.2 | 10 | PDB header:translation Chain: A: PDB Molecule:elongation factor p; PDBTitle: structure of a translation elongation factor p (efp) from coxiella2 burnetii
25 | d1pkma1 |
| not modelled | 16.8 | 12 | Fold:PK beta-barrel domain-like Superfamily:PK beta-barrel domain-like Family:Pyruvate kinase beta-barrel domain
26 | c2v43A_ |
| not modelled | 16.7 | 12 | PDB header:regulator Chain: A: PDB Molecule:sigma-e factor regulatory protein rseb; PDBTitle: crystal structure of rseb: a sensor for periplasmic stress2 response in e. coli
27 | d1jb7a2 |
| not modelled | 16.7 | 13 | Fold:OB-fold Superfamily:Nucleic acid-binding proteins Family:Single strand DNA-binding domain, SSB
28 | c3degC_ |
| not modelled | 16.5 | 19 | PDB header:ribosome Chain: C: PDB Molecule:gtp-binding protein lepa; PDBTitle: complex of elongating escherichia coli 70s ribosome and ef4(lepa)-2 gmppnp
29 | c3er0A_ |
| not modelled | 16.4 | 7 | PDB header:translation Chain: A: PDB Molecule:eukaryotic translation initiation factor 5a-2; PDBTitle: crystal structure of the full length eif5a from2 saccharomyces cerevisiae
30 | d2cqaa1 |
| not modelled | 16.1 | 13 | Fold:OB-fold Superfamily:Nucleic acid-binding proteins Family:TIP49 domain
31 | c2jkdB_ |
| not modelled | 15.8 | 22 | PDB header:gene regulation Chain: B: PDB Molecule:pre-mrna leakage protein 1; PDBTitle: structure of the yeast pml1 splicing factor and its2 integration into the res complex
32 | d1a3xa1 |
| not modelled | 14.5 | 7 | Fold:PK beta-barrel domain-like Superfamily:PK beta-barrel domain-like Family:Pyruvate kinase beta-barrel domain
33 | d1mzka_ |
| not modelled | 14.4 | 11 | Fold:SMAD/FHA domain Superfamily:SMAD/FHA domain Family:FHA domain
34 | c2eifA_ |
| not modelled | 13.7 | 14 | PDB header:gene regulation Chain: A: PDB Molecule:protein (eukaryotic translation initiation factor 5a); PDBTitle: eukaryotic translation initiation factor 5a from methanococcus2 jannaschii
35 | c3igzB_ |
| not modelled | 13.5 | 28 | PDB header:isomerase Chain: B: PDB Molecule:cofactor-independent phosphoglycerate mutase; PDBTitle: crystal structures of leishmania mexicana phosphoglycerate2 mutase at low cobalt concentration
36 | c2kzbA_ |
| not modelled | 13.5 | 18 | PDB header:protein transport Chain: A: PDB Molecule:autophagy-related protein 19; PDBTitle: solution structure of alpha-mannosidase binding domain of atg19
37 | d1udxa3 |
| not modelled | 13.1 | 11 | Fold:Obg GTP-binding protein C-terminal domain Superfamily:Obg GTP-binding protein C-terminal domain Family:Obg GTP-binding protein C-terminal domain
38 | d1bdoa_ |
| not modelled | 12.8 | 21 | Fold:Barrel-sandwich hybrid Superfamily:Single hybrid motif Family:Biotinyl/lipoyl-carrier proteins and domains
39 | c1r21A_ |
| not modelled | 12.7 | 11 | PDB header:cell cycle Chain: A: PDB Molecule:antigen ki-67; PDBTitle: solution structure of human ki67 fha domain
40 | d2c78a1 |
| not modelled | 12.3 | 22 | Fold:Reductase/isomerase/elongation factor common domain Superfamily:Translation proteins Family:Elongation factors
41 | c2z14A_ |
| not modelled | 12.1 | 12 | PDB header:signaling protein Chain: A: PDB Molecule:ef-hand domain-containing family member c2; PDBTitle: crystal structure of the n-terminal duf1126 in human ef-2 hand domain containing 2 protein
42 | d1e0ta1 |
| not modelled | 11.9 | 18 | Fold:PK beta-barrel domain-like Superfamily:PK beta-barrel domain-like Family:Pyruvate kinase beta-barrel domain
43 | d2dy1a1 |
| not modelled | 11.8 | 25 | Fold:Reductase/isomerase/elongation factor common domain Superfamily:Translation proteins Family:Elongation factors
44 | d2affa1 |
| not modelled | 11.4 | 11 | Fold:SMAD/FHA domain Superfamily:SMAD/FHA domain Family:FHA domain
45 | c1uebB_ |
| not modelled | 11.2 | 14 | PDB header:rna binding protein Chain: B: PDB Molecule:elongation factor p; PDBTitle: crystal structure of translation elongation factor p from2 thermus thermophilus hb8
46 | c2vv5D_ |
| not modelled | 11.1 | 21 | PDB header:membrane protein Chain: D: PDB Molecule:small-conductance mechanosensitive channel; PDBTitle: the open structure of mscs
47 | d1njjb1 |
| not modelled | 11.1 | 22 | Fold:Domain of alpha and beta subunits of F1 ATP synthase-like Superfamily:Alanine racemase C-terminal domain-like Family:Eukaryotic ODC-like
48 | d1awwa_ |
| not modelled | 11.1 | 9 | Fold:SH3-like barrel Superfamily:SH3-domain Family:SH3-domain
49 | c3gqsB_ |
| not modelled | 11.0 | 19 | PDB header:structural genomics, unknown function Chain: B: PDB Molecule:adenylate cyclase-like protein; PDBTitle: crystal structure of the fha domain of ct664 protein from chlamydia2 trachomatis
50 | d1kzla1 |
| not modelled | 10.9 | 12 | Fold:Reductase/isomerase/elongation factor common domain Superfamily:Riboflavin synthase domain-like Family:Riboflavin synthase
51 | c2jpeA_ |
| not modelled | 10.9 | 25 | PDB header:transcription Chain: A: PDB Molecule:nuclear inhibitor of protein phosphatase 1; PDBTitle: fha domain of nipp1
52 | d1s04a_ |
| not modelled | 10.6 | 24 | Fold:PUA domain-like Superfamily:PUA domain-like Family:ProFAR isomerase associated domain
53 | c3oyyA_ |
| not modelled | 10.5 | 5 | PDB header:translation Chain: A: PDB Molecule:elongation factor p; PDBTitle: structure of pseudomonas aeruginosa elongation factor p
54 | d2phcb1 |
| not modelled | 10.5 | 29 | Fold:Cyclophilin-like Superfamily:Cyclophilin-like Family:PH0987 C-terminal domain-like
55 | d1gl4a1 |
| not modelled | 10.3 | 18 | Fold:GFP-like Superfamily:GFP-like Family:Domain G2 of nidogen-1
56 | c2phcB_ |
| not modelled | 10.3 | 29 | PDB header:structural genomics, unknown function Chain: B: PDB Molecule:uncharacterized protein ph0987; PDBTitle: crystal structure of conserved uncharacterized protein ph0987 from2 pyrococcus horikoshii
57 | d1f60a1 |
| not modelled | 10.3 | 25 | Fold:Reductase/isomerase/elongation factor common domain Superfamily:Translation proteins Family:Elongation factors
58 | d1o8ba1 |
| not modelled | 10.2 | 29 | Fold:NagB/RpiA/CoA transferase-like Superfamily:NagB/RpiA/CoA transferase-like Family:D-ribose-5-phosphate isomerase (RpiA), catalytic domain
59 | c1i8dB_ |
| not modelled | 10.1 | 19 | PDB header:transferase Chain: B: PDB Molecule:riboflavin synthase; PDBTitle: crystal structure of riboflavin synthase
60 | c1a3wB_ |
| not modelled | 9.7 | 7 | PDB header:transferase Chain: B: PDB Molecule:pyruvate kinase; PDBTitle: pyruvate kinase from saccharomyces cerevisiae complexed with fbp, pg,2 mn2+ and k+
61 | d1mkfa_ |
| not modelled | 9.6 | 21 | Fold:Viral chemokine binding protein m3 Superfamily:Viral chemokine binding protein m3 Family:Viral chemokine binding protein m3
62 | c3elsA_ |
| not modelled | 9.6 | 22 | PDB header:splicing Chain: A: PDB Molecule:pre-mrna leakage protein 1; PDBTitle: crystal structure of yeast pml1p, residues 51-204
63 | c1iz6B_ |
| not modelled | 9.6 | 14 | PDB header:biosynthetic protein Chain: B: PDB Molecule:initiation factor 5a; PDBTitle: crystal structure of translation initiation factor 5a from pyrococcus2 horikoshii
64 | c3poaA_ |
| not modelled | 9.5 | 28 | PDB header:peptide binding protein Chain: A: PDB Molecule:putative uncharacterized protein tb39.8; PDBTitle: structural and functional analysis of phosphothreonine-dependent fha2 domain interactions
65 | d1yjma1 |
| not modelled | 9.0 | 35 | Fold:SMAD/FHA domain Superfamily:SMAD/FHA domain Family:FHA domain
66 | d2g1la1 |
| not modelled | 8.8 | 17 | Fold:SMAD/FHA domain Superfamily:SMAD/FHA domain Family:FHA domain
67 | c2kzkA_ |
| not modelled | 8.8 | 14 | PDB header:protein transport Chain: A: PDB Molecule:uncharacterized protein yol083w; PDBTitle: solution structure of alpha-mannosidase binding domain of atg34
68 | c1ybyB_ |
| not modelled | 8.6 | 24 | PDB header:translation Chain: B: PDB Molecule:translation elongation factor p; PDBTitle: conserved hypothetical protein cth-95 from clostridium2 thermocellum
69 | c3fm8A_ |
| not modelled | 8.3 | 29 | PDB header:transport protein/hydrolase activator Chain: A: PDB Molecule:kinesin-like protein kif13b; PDBTitle: crystal structure of full length centaurin alpha-1 bound with the fha2 domain of kif13b (capri target)
70 | d1pkla1 |
| not modelled | 8.3 | 12 | Fold:PK beta-barrel domain-like Superfamily:PK beta-barrel domain-like Family:Pyruvate kinase beta-barrel domain
71 | d1bkba1 |
| not modelled | 8.3 | 19 | Fold:SH3-like barrel Superfamily:Translation proteins SH3-like domain Family:eIF5a N-terminal domain-like
72 | d2qqra2 |
| not modelled | 8.2 | 17 | Fold:SH3-like barrel Superfamily:Tudor/PWWP/MBT Family:Tudor domain
73 | c2zpmA_ |
| not modelled | 8.1 | 13 | PDB header:hydrolase Chain: A: PDB Molecule:regulator of sigma e protease; PDBTitle: crystal structure analysis of pdz domain b
74 | c3e20A_ |
| not modelled | 8.1 | 19 | PDB header:translation Chain: A: PDB Molecule:eukaryotic peptide chain release factor gtp-binding PDBTitle: crystal structure of s.pombe erf1/erf3 complex
75 | d2g82a1 |
| not modelled | 7.8 | 12 | Fold:NAD(P)-binding Rossmann-fold domains Superfamily:NAD(P)-binding Rossmann-fold domains Family:Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
76 | c1h4uA_ |
| not modelled | 7.7 | 20 | PDB header:extracellular matrix protein Chain: A: PDB Molecule:nidogen-1; PDBTitle: domain g2 of mouse nidogen-1
77 | d1gtta1 |
| not modelled | 7.5 | 12 | Fold:FAH Superfamily:FAH Family:FAH
78 | d2zjrm1 |
| not modelled | 7.4 | 19 | Fold:SH3-like barrel Superfamily:Translation proteins SH3-like domain Family:Ribosomal protein L19
79 | d3etja1 |
| not modelled | 7.4 | 44 | Fold:Barrel-sandwich hybrid Superfamily:Rudiment single hybrid motif Family:BC C-terminal domain-like
80 | d2p13a1 |
| not modelled | 7.4 | 16 | Fold:FAD-binding/transporter-associated domain-like Superfamily:FAD-binding/transporter-associated domain-like Family:CorC/HlyC domain-like
81 | d1o8bb1 |
| not modelled | 7.3 | 31 | Fold:NagB/RpiA/CoA transferase-like Superfamily:NagB/RpiA/CoA transferase-like Family:D-ribose-5-phosphate isomerase (RpiA), catalytic domain
82 | c3gmgB_ |
| not modelled | 7.3 | 15 | PDB header:structural genomics, unknown function Chain: B: PDB Molecule:uncharacterized protein rv1825/mt1873; PDBTitle: crystal structure of an uncharacterized conserved protein2 from mycobacterium tuberculosis
83 | d2eifa1 |
| not modelled | 7.3 | 14 | Fold:SH3-like barrel Superfamily:Translation proteins SH3-like domain Family:eIF5a N-terminal domain-like
84 | c2p5dA_ |
| not modelled | 7.3 | 32 | PDB header:structural genomics, unknown function Chain: A: PDB Molecule:upf0310 protein mjecl36; PDBTitle: crystal structure of mjecl36 from methanocaldococcus2 jannaschii dsm 2661
85 | c3gqjA_ |
| not modelled | 7.2 | 25 | PDB header:unknown function Chain: A: PDB Molecule:cell inhibiting factor (cif); PDBTitle: crystal structure of cell inhibiting factor (cif) from photorhabdus2 luminescens
86 | d2brfa1 |
| not modelled | 7.1 | 29 | Fold:SMAD/FHA domain Superfamily:SMAD/FHA domain Family:FHA domain
87 | d1iz6a1 |
| not modelled | 7.0 | 14 | Fold:SH3-like barrel Superfamily:Translation proteins SH3-like domain Family:eIF5a N-terminal domain-like
88 | c3llbA_ |
| not modelled | 7.0 | 21 | PDB header:structural genomics, unknown function Chain: A: PDB Molecule:uncharacterized protein; PDBTitle: the crystal structure of the protein pa3983 with unknown2 function from pseudomonas aeruginosa pao1
89 | d3deda1 |
| not modelled | 7.0 | 11 | Fold:FAD-binding/transporter-associated domain-like Superfamily:FAD-binding/transporter-associated domain-like Family:CorC/HlyC domain-like
90 | c1yj5C_ |
| not modelled | 7.0 | 35 | PDB header:transferase Chain: C: PDB Molecule:5' polynucleotide kinase-3' phosphatase fha domain; PDBTitle: molecular architecture of mammalian polynucleotide kinase, a dna2 repair enzyme
91 | d2cowa1 |
| not modelled | 6.9 | 29 | Fold:SH3-like barrel Superfamily:Cap-Gly domain Family:Cap-Gly domain
92 | d1f3ta1 |
| not modelled | 6.7 | 22 | Fold:Domain of alpha and beta subunits of F1 ATP synthase-like Superfamily:Alanine racemase C-terminal domain-like Family:Eukaryotic ODC-like
93 | c3hx1B_ |
| not modelled | 6.6 | 19 | PDB header:structural genomics, unknown function Chain: B: PDB Molecule:slr1951 protein; PDBTitle: crystal structure of the slr1951 protein from synechocystis sp.2 northeast structural genomics consortium target sgr167a
94 | d2plia1 |
| not modelled | 6.5 | 16 | Fold:FAD-binding/transporter-associated domain-like Superfamily:FAD-binding/transporter-associated domain-like Family:CorC/HlyC domain-like
95 | d2o3ga1 |
| not modelled | 6.5 | 17 | Fold:FAD-binding/transporter-associated domain-like Superfamily:FAD-binding/transporter-associated domain-like Family:CorC/HlyC domain-like
96 | c3cfuA_ |
| not modelled | 6.5 | 28 | PDB header:lipoprotein Chain: A: PDB Molecule:uncharacterized lipoprotein yjha; PDBTitle: crystal structure of the yjha protein from bacillus2 subtilis. northeast structural genomics consortium target3 sr562
97 | d2toda1 |
| not modelled | 6.5 | 18 | Fold:Domain of alpha and beta subunits of F1 ATP synthase-like Superfamily:Alanine racemase C-terminal domain-like Family:Eukaryotic ODC-like
98 | d2o1ra1 |
| not modelled | 6.4 | 11 | Fold:FAD-binding/transporter-associated domain-like Superfamily:FAD-binding/transporter-associated domain-like Family:CorC/HlyC domain-like
99 | d2ff4a3 |
| not modelled | 6.4 | 19 | Fold:SMAD/FHA domain Superfamily:SMAD/FHA domain Family:FHA domain