Phyre 2 alignment of P05706 with c2fhdA_

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Job Description | P05706
Confidence | 22.95% | Date | Thu Jan 5 10:58:48 GMT 2012
Rank | 12 | Aligned Residues | 49
% Identity | 22% | Template | c2fhdA_
PDB info | PDB header:cell cycle | Chain: A: PDB Molecule:dna repair protein rhp9/crb2; | PDBTitle: crystal structure of crb2 tandem tudor domains
Resolution | 2.40 Å

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 65 | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | Y | P | V | T | A | V | G | S | V | A | E | D | N | L | R | E | L | G | H | V | T | L | R | F | D | G | L | N | E | A | E | F | P | G | T | V | H | V | A | G | P | V | P | D | D | I | A | P | G | S | V | L | K | F
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | Y | P | A | T | L | V | A | P | . | V | H | S | A | V | T | S | S | I | X | Y | K | V | Q | F | D | D | A | . | . | . | . | T | X | S | T | V | N | S | N | Q | I | K | R | F | F | L | K | K | G | D | V | V | Q | S
Template Known Secondary structure |  |  |  |  |  |  |  |  |  | . |  |  |  | S | S |  |  | S |  |  |  |  |  |  |  | T | T | S | . | . | . | . |  |  |  |  |  |  | T | T | S |  |  |  | S |  |  |  | T | T |  |  |  |  |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 378 | . | 380 | . | . | . | . | . |  | . | . | . | . | 390 | . | . | . | . | . | . | . | . | . | 400 | . | . | . |  |  |  |  | . | . | . | . | . | . | 410 | . | . | . | . | . | . | . | . | . | 420 | . | . | . | . | . | .

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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