Phyre 2 alignment of P05706 with c2p5dA_

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Job Description | P05706
Confidence | 7.26% | Date | Thu Jan 5 10:58:48 GMT 2012
Rank | 84 | Aligned Residues | 19
% Identity | 32% | Template | c2p5dA_
PDB info | PDB header:structural genomics, unknown function | Chain: A: PDB Molecule:upf0310 protein mjecl36; | PDBTitle: crystal structure of mjecl36 from methanocaldococcus2 jannaschii dsm 2661
Resolution | 1.70 Å

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 52 | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | 70 | . | . | . | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |
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Query Sequence |  | L | H | P | G | L | Q | F | S | L | G | Q | H | R | Y | P | . | . | . | . | . | . | . | . | . | . | . | . | V | T | A | V | G | S | V | A
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  | . | . | . | . |  |  | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | V | K | V | G | D | K | L | I | I | . | . | . | . | Y | E | I | Q | R | S | G | K | D | Y | K | P | P | Y | I | R | G | V | Y | E | V | V
Template Known Secondary structure |  |  |  | T | T |  |  |  |  |  | . | . | . | . |  |  |  |  | B |  | S | T | T |  | B |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 38 | . | 40 | . | . | . | . | . | . |  |  |  |  | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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