Phyre 2 alignment of P52005 with c2czsB_

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Job Description | P52005
Confidence | 44.12% | Date | Thu Jan 5 12:04:53 GMT 2012
Rank | 178 | Aligned Residues | 54
% Identity | 19% | Template | c2czsB_
PDB info | PDB header:electron transport | Chain: B: PDB Molecule:cytochrome c, putative; | PDBTitle: crystal structure analysis of the diheme c-type cytochrome dhc2
Resolution | 1.50 Å

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 107 | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . |  |  | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | E | A | H | R | Q | E | M | A | E | T | V | W | K | E | L | K | A | T | D | S | A | T | C | R | S | C | H | S | F | D | . | . | A | M | D | I | A | S | Q | S | E | S | A | Q | K | M | H | N | K | A | Q | K | D | S | E | T | C | I | D | C | H | K
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | T | N | H | K | R | F | Y | D | A | F | A | Q | G | A | G | K | L | D | L | D | R | Q | C | V | E | C | H | H | E | K | P | G | G | I | P | F | P | K | N | H | P | V | . | . | . | . | . | . | K | P | A | D | G | P | M | R | C | L | F | C | H | K
Template Known Secondary structure |  | T | T | T |  |  |  |  |  |  |  |  | T | T |  |  |  |  |  |  |  |  |  |  | T | T | T | B |  |  | S | S | S | S | B |  |  |  | T | T |  |  |  | . | . | . | . | . | . |  |  | S | S | S |  |  |  |  |  |  |  | S |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 37 | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . |  |  |  |  |  |  | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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