Phyre 2 alignment of P52005 with d1ogyb_

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Job Description | P52005
Confidence | 89.80% | Date | Thu Jan 5 12:04:53 GMT 2012
Rank | 123 | Aligned Residues | 42
% Identity | 26% | Template | d1ogyb_
SCOP info | Multiheme cytochromes | Multiheme cytochromes | Di-heme elbow motif
Resolution | 3.2

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 33 | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . |  |  |  | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  | . | . | 70 | . | . | . | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . |  |  |  |  |  |  |
Query Sequence |  | T | S | D | T | A | F | C | L | S | C | H | S | M | S | K | P | F | E | E | Y | Q | . | . | . | G | T | V | H | F | S | N | Q | K | G | I | R | A | E | . | . | . | . | . | . | . | . | C | A | D | C | H | I | P
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | S | V | N | A | N | R | C | L | E | C | H | R | R | Q | Y | S | G | L | V | A | A | P | M | I | S | I | T | H | F | Q | D | R | E | G | Q | M | L | A | D | V | S | P | R | R | Y | F | C | T | A | C | H | V | P
Template Known Secondary structure |  | S | S | S |  | B | G | G | G | G | T | S |  |  |  |  | T | T |  |  |  |  |  |  | S |  | G | G | G | G | B |  | T | T | S |  | B |  | S | S |  |  | S | T | T |  |  | G | G | G | T |  |  | B
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 52 | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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