Phyre 2 alignment of P52005 with d1jdla_

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Job Description | P52005
Confidence | 58.98% | Date | Thu Jan 5 12:04:53 GMT 2012
Rank | 172 | Aligned Residues | 20
% Identity | 20% | Template | d1jdla_
SCOP info | Cytochrome c | Cytochrome c | monodomain cytochrome c
Resolution | 1.70

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 303 | . | . | . | . | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 | . | . | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | Q | Y | A | E | K | L | D | D | T | Y | C | A | G | C | H | A | P | I | A | A | D
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | A | K | G | E | A | V | F | . | K | K | C | M | A | C | H | R | V | G | P | D | A
Template Known Secondary structure |  |  |  |  |  |  |  | G | . | G | G | T | T | T | T |  |  |  | S | T | T |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 6 | . | . | . | 10 | . | . |  | . | . | . | . | . | . | . | 20 | . | . | . | . | .

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No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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