Phyre 2 alignment of P52005 with c2k3vA_

Return to main results | Retrieve Phyre Job Id

Job Description | P52005
Confidence | 88.62% | Date | Thu Jan 5 12:04:53 GMT 2012
Rank | 129 | Aligned Residues | 35
% Identity | 37% | Template | c2k3vA_
PDB info | PDB header:electron transport | Chain: A: PDB Molecule:tetraheme cytochrome c-type; | PDBTitle: solution structure of a tetrahaem cytochrome from2 shewanella frigidimarina
Resolution | UNK

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 36 | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | T | A | F | C | L | S | C | H | S | M | S | K | P | F | E | E | Y | Q | G | T | V | H | F | S | N | Q | K | G | I | R | A | E | C | A | D | C | H | I | P | K | S
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | F | E | Q | C | Q | S | C | H | G | . | S | L | A | E | M | D | D | N | H | K | P | H | D | G | . | . | . | . | . | L | L | M | C | A | D | C | H | A | P | H | E
Template Known Secondary structure |  |  |  |  | T | S | S | S | S |  | . |  | G | G | G | S |  | T | T |  |  |  |  | S | S | . | . | . | . | . | S | S |  |  |  |  |  | S |  | T | T | T
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 32 | . | . | . | . | . | . | . | 40 |  | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . |  |  |  |  |  | . | . | . | . | . | 60 | . | . | . | . | . | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys |
Disclaimer
Terms and Conditions