Phyre 2 alignment of P52005 with d1iqca1

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Job Description | P52005
Confidence | 22.79% | Date | Thu Jan 5 12:04:53 GMT 2012
Rank | 189 | Aligned Residues | 19
% Identity | 21% | Template | d1iqca1
SCOP info | Cytochrome c | Cytochrome c | Di-heme cytochrome c peroxidase
Resolution | 1.80

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 299 | 300 | . | . | . | . | . | . | . | . | . | 310 | . | . |  |  |  |  |  |  |  |  |  | . | . | . | . | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . |  |  |  |  |
Query Sequence |  | K | P | L | W | Q | Y | A | E | K | L | D | D | T | Y | . | . | . | . | . | . | . | . | . | C | A | G | C | H
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | A | D | M | A | E | L | G | K | M | L | F | F | D | P | R | L | S | K | S | G | F | I | S | C | N | S | C | H
Template Known Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  | T |  | G | G | G | S | S | S | S |  |  |  |  |  |  |  | S
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 16 | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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