14 c1ynpA_ Probab=100.00  E-value=0  Score=402.36  Aligned_columns=272  Identities=33%

Q ss_pred             CCEEECCCCCCEECHHHEECCCCCCCCCHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCC
Q ss_conf             96305849886634113622534889888999999999998699889962101886665566814899999998337866
Q batch____         1 MQYHRIPHSSLEVSTLGLGTMTFGEQNSEADAHAQLDYAVAQGINLIDVAEMYPVPPRPETQGLTETYVGNWLAKHGSRE   80 (346)
Q Consensus         1 M~yr~lg~t~l~vs~lg~G~~~~g~~~~~~ea~~ii~~A~~~Gin~fDTA~~Yg~~~~~~~~G~sE~~lG~~l~~~~~r~   80 (346)
                      |+||+||+||++||+||||||++|.  +++++.++|++|+++|||+||||+.||       +|.||+.||+||++  .|.
T Consensus         2 M~~r~lG~tg~~vs~lglGt~~~g~--~~~~~~~~l~~A~~~Gin~fDTA~~Yg-------~g~sE~~lG~~l~~--~~~   70 (283)
T c1ynpA_           2 MKKRQLGTSDLHVSELGFGCMSLGT--DETKARRIMDEVLELGINYLDTADLYN-------QGLNEQFVGKALKG--RRQ   70 (283)
T ss_dssp             CCEEECTTSSCEEESBCBCSCCCCS--CHHHHHHHHHHHHHTTCCEEECSCBTT-------BCCCHHHHHHHHTT--CGG
T ss_pred             CCCCCCCCCCCEECCEEEEECCCCC--CHHHHHHHHHHHHHCCCCEEECCCHHC-------CCHHHHHHHHHHHH--CCC
T ss_conf             7533476998653402072088987--889999999999986998899710318-------98448999999840--487


Q ss_pred             EEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHEEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHH
Q ss_conf             08980200136766766666767899899999999999983998534689711577665443334566566666769999
Q batch____        81 KLIIASKVSGPSRNNDKGIRPDQALDRKNIREALHDSLKRLQTDYLDLYQVHWPQRPTNCFGKLGYSWTDSAPAVSLLDT  160 (346)
Q Consensus        81 ~i~i~tK~g~~~~~~~~~~~~~~~~~~~~i~~~~e~SL~~Lg~d~iDl~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~e~  160 (346)
                      .+++++|.+                 ++.++++++.||++|++||||++++|+|+...                 +.+++
T Consensus        71 ~~~~~~~~~-----------------~~~i~~~~e~sl~~L~~d~iDl~~lh~~~~~~-----------------~~~~~  116 (283)
T c1ynpA_          71 DIILATKVS-----------------KAYIKEAVKDSLRRLQTDYIDLYQLHGGTIDD-----------------PIDET  116 (283)
T ss_dssp             GCEEEEECC-----------------HHHHHHHHHHHHHHHTCSCEEEEEECSCCTTS-----------------CHHHH
T ss_pred             EEEECCCCC-----------------HHHHHHHHHHHHHHHCCCCCCHHHCCCCCCCC-----------------CHHHH
T ss_conf             699726753-----------------79999999999997089843202100688788-----------------96889


Q ss_pred             HHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHHHHCCCEEEECCCCCCCC
Q ss_conf             99999999878861786238899999999999887089760797323643320357999999997498178617446642
Q batch____       161 LDALAEYQRAGKIRYIGVSNETAFGVMRYLHLADKHDLPRIVTIQNPYSLLNRSFEVGLAEVSQYEGVELLAYSCLGFGT  240 (346)
Q Consensus       161 ~~~l~~L~~~G~ir~iGis~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~gi~~~~~~~l~~G~  240 (346)
                      +++|++|+++|+|++||+|+|++..+.++...      ..++++|++||++++..+ .++++|+++|+++++++|+++|.
T Consensus       117 ~~~l~~l~~~g~i~~iG~s~~~~~~~~~~~~~------~~~~~~q~~~n~~~~~~~-~~l~~~~~~g~~~~~~~~l~~g~  189 (283)
T c1ynpA_         117 IEAFEELKQEGVIRYYGISSIRPNVIKEYLKR------SNIVSIMMQYSILDRRPE-EWFPLIQEHGVSVVVRGPVARGL  189 (283)
T ss_dssp             HHHHHHHHHHTSEEEEEEECCCHHHHHHHHHH------SCCCEEEEECBTTBCGGG-GGHHHHHHTTCEEEEECTTGGGT
T ss_pred             HHHHHHHHHHHHCCEECCCCCCHHHHHHHCCC------CCCEEEEEEECCCCCCCH-HHHHHHHHCCCEEEEEECCCCCC
T ss_conf             99999999843047131477888999983133------571288871036756747-88999998498279800023531


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHH
Q ss_conf             15775788886532212100012247867899999999999882999899999999958994199628989999999898
Q batch____       241 LTGKYLNGAKPAGARNTLFSRFTRYSGEQTQKAVAAYVDIARRHGLDPAQMALAFVRRQPFVASTLLGATTMDQLKTNIE  320 (346)
Q Consensus       241 L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ia~~~g~s~aq~al~~~l~~p~v~~~i~G~~~~~~l~e~l~  320 (346)
                      |++.......+.........               .+..+|.++++|++|+|++|++++|.|++||+|+++++||+||++
T Consensus       190 l~~~~~~~~~~~~~~~~~~~---------------~~~~~a~~~~~s~~q~al~~~l~~~~v~~vi~G~~~~~~l~enl~  254 (283)
T c1ynpA_         190 LSRRPLPEGEGYLNYRYDEL---------------KLLRESLPTDRPLHELALQYCLAHDVVATVAAGASSIDQVKANVQ  254 (283)
T ss_dssp             TSSSCCCTTCCBTTBCHHHH---------------HHHHHHSCSSSCHHHHHHHHHHTSTTEEEEECCCSSHHHHHHHHH
T ss_pred             CCCCCCCCCCCCCCCHHHHH---------------HHHHHHHHCCCCHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHH
T ss_conf             24786767544321010138---------------999999870999899999999848994099617999999999898


Q ss_pred             HCCC-CCCHHHHHHHHHHHH
Q ss_conf             6189-988899999997656
Q batch____       321 SLHL-ELSEDVLAEIEAVHQ  339 (346)
Q Consensus       321 a~~~-~L~~e~~~~ld~l~~  339 (346)
                      ++++ +|++|++++|+++.+
T Consensus       255 a~~~~~Lt~ee~~~i~~~~~  274 (283)
T c1ynpA_         255 AVEATPLTAEERQHIQKLAK  274 (283)
T ss_dssp             HHTSCCCCHHHHHHHHHHSC
T ss_pred             HCCCCCCCHHHHHHHHHHCC
T ss_conf             61988889899999996411