BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= batch____ (219 letters) Database: uniref50.fasta 3,077,464 sequences; 1,040,396,356 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value UniRef50_P0A9F0 Regulatory protein nsr n=59 Tax=Enterobacteriace... 456 e-127 UniRef50_Q03NI3 Crp-like transcriptional regulator n=1 Tax=Lacto... 230 3e-59 UniRef50_D1ART3 Transcriptional regulator, Crp/Fnr family n=1 Ta... 223 3e-57 UniRef50_C6LEY7 Regulatory protein nsr n=1 Tax=Bryantella format... 183 4e-45 UniRef50_A0RLJ1 Cyclic nucleotide-binding domain protein n=37 Ta... 180 3e-44 UniRef50_A3IBY0 DNA-binding transcriptional activator of station... 170 3e-41 UniRef50_Q814L9 Catabolite gene activator n=33 Tax=Bacillus RepI... 169 5e-41 UniRef50_Q2BCV7 Cyclic nucleotide-binding domain protein n=2 Tax... 164 2e-39 UniRef50_C0X6Y2 Cyclic nucleotide-binding domain protein n=22 Ta... 123 4e-27 UniRef50_B0ABB5 Putative uncharacterized protein n=1 Tax=Clostri... 113 5e-24 UniRef50_C9A6F2 Cyclic nucleotide-binding domain-containing prot... 112 1e-23 UniRef50_A0RGL8 Cyclic nucleotide-binding domain protein n=90 Ta... 111 2e-23 UniRef50_A6LU88 Cyclic nucleotide-binding protein n=3 Tax=Clostr... 108 9e-23 UniRef50_A2RKL5 Cyclic nucleotide-binding domain protein n=1 Tax... 107 3e-22 UniRef50_C8ZXE5 Cyclic nucleotide-binding domain-containing prot... 105 1e-21 UniRef50_Q3D9B2 Cyclic nucleotide-binding domain protein n=11 Ta... 101 2e-20 UniRef50_C0D933 Putative uncharacterized protein n=1 Tax=Clostri... 100 4e-20 UniRef50_Q0TU94 Cyclic nucleotide-binding domain protein n=8 Tax... 100 6e-20 UniRef50_D0AGV6 Predicted protein n=2 Tax=Enterococcus RepID=D0A... 99 9e-20 UniRef50_C9A466 Cyclic nucleotide-binding domain-containing prot... 98 2e-19 UniRef50_B1HPB0 Regulatory protein nsr n=1 Tax=Lysinibacillus sp... 97 5e-19 UniRef50_C3RH00 Cyclic nucleotide-binding protein n=2 Tax=Bacter... 95 2e-18 UniRef50_C5WE90 Cyclic nucleotide-binding domain protein n=1 Tax... 93 6e-18 UniRef50_Q03MP5 Crp-like transcriptional regulator n=4 Tax=Strep... 91 2e-17 UniRef50_A9KNS6 Cyclic nucleotide-binding protein n=2 Tax=Clostr... 91 2e-17 UniRef50_C7UQ67 Predicted protein n=2 Tax=Enterococcus faecalis ... 91 3e-17 UniRef50_B1MYN1 Cyclic AMP receptor protein, putative n=1 Tax=Le... 90 6e-17 UniRef50_C6D048 Transcriptional regulator, Crp/Fnr family n=1 Ta... 87 3e-16 UniRef50_A9KSA1 Cyclic nucleotide-binding protein n=2 Tax=Clostr... 85 2e-15 UniRef50_C0ZJL4 Probable transcriptional regulator n=1 Tax=Brevi... 84 4e-15 UniRef50_B9DTE0 Crp family regulatory protein n=2 Tax=Streptococ... 81 2e-14 UniRef50_C5EL33 Cyclic nucleotide-binding protein n=1 Tax=Clostr... 81 3e-14 UniRef50_UPI0001C3627B cyclic nucleotide-binding protein n=1 Tax... 80 6e-14 UniRef50_C4IGF0 Cyclic nucleotide-binding domain protein n=2 Tax... 77 4e-13 UniRef50_B7H5E4 Catabolite gene activator n=39 Tax=Bacillus cere... 73 7e-12 UniRef50_C4L0C4 Transcriptional regulator, Crp/Fnr family n=1 Ta... 73 8e-12 UniRef50_UPI00018512E8 cyclic nucleotide-binding protein n=1 Tax... 71 2e-11 UniRef50_A5I0L6 Cyclic nucleotide-binding domain protein n=19 Ta... 67 6e-10 UniRef50_A8FDX9 Possible Crp family transcriptional regulator n=... 66 1e-09 UniRef50_A0RHC9 Transcriptional regulator, Crp/Fnr family n=5 Ta... 64 3e-09 UniRef50_C0QQT2 Transcription regulator n=1 Tax=Persephonella ma... 62 2e-08 UniRef50_Q30QZ1 Putative transcriptional regulator, Crp/Fnr fami... 61 3e-08 UniRef50_D1AN20 Putative transcriptional regulator, Crp/Fnr fami... 59 9e-08 UniRef50_B1YHB5 Cyclic nucleotide-binding protein n=2 Tax=Exiguo... 58 2e-07 UniRef50_UPI000197CA44 hypothetical protein PretD1_04436 n=1 Tax... 56 8e-07 UniRef50_A6EDB2 Putative FNR-family transcriptional regulator pr... 55 2e-06 UniRef50_A3I0Z6 Putative FNR-family transcriptional regulator pr... 55 2e-06 UniRef50_Q2SHS2 CAMP-binding protein-catabolite gene activator a... 54 4e-06 UniRef50_C7PAL9 Transcriptional regulator, Crp/Fnr family n=2 Ta... 54 4e-06 UniRef50_Q2G6R8 Transcriptional regulator, Crp/Fnr family n=3 Ta... 54 4e-06 UniRef50_B5YHX8 Transcriptional regulator, putative n=1 Tax=Ther... 54 5e-06 UniRef50_A7GXI3 Transcription regulator n=5 Tax=Campylobacter Re... 53 6e-06 UniRef50_C3X8Q5 Transcriptional regulator n=1 Tax=Oxalobacter fo... 53 7e-06 UniRef50_A7I340 Transcription regulator n=1 Tax=Campylobacter ho... 53 9e-06 UniRef50_D1TDT1 Putative transcriptional regulator, Crp/Fnr fami... 52 1e-05 UniRef50_C0CR54 Putative uncharacterized protein n=1 Tax=Blautia... 52 2e-05 UniRef50_A6LCQ3 cAMP-binding domain transcriptional regulator n=... 52 2e-05 UniRef50_UPI0001B9EE88 putative transcriptional regulator, Crp/F... 52 2e-05 UniRef50_Q30Y06 Transcriptional regulator, Crp/Fnr family n=6 Ta... 51 2e-05 UniRef50_A5CYQ7 Putative uncharacterized protein n=1 Tax=Pelotom... 50 4e-05 UniRef50_D2QLW5 Transcriptional regulator, Crp/Fnr family n=1 Ta... 50 4e-05 UniRef50_B8K4D0 Putative cAMP-binding protein n=1 Tax=Vibrio par... 50 5e-05 UniRef50_C6XD76 Transcriptional regulator, Crp/Fnr family n=1 Ta... 50 6e-05 UniRef50_C4KA14 Transcriptional regulator, Crp/Fnr family n=1 Ta... 50 6e-05 UniRef50_Q7N3E6 Similar to transcription regulator n=2 Tax=Photo... 50 8e-05 UniRef50_C9KQT9 Transcriptional regulator, Crp/Fnr family n=1 Ta... 49 1e-04 UniRef50_B2V833 Transcriptional regulator, Crp/Fnr family n=2 Ta... 48 2e-04 UniRef50_C0GFA6 Transcriptional regulator, Crp/Fnr family n=1 Ta... 48 2e-04 UniRef50_Q4ZZV6 Cyclic nucleotide-binding n=5 Tax=Pseudomonas sy... 48 2e-04 UniRef50_C3XLC9 Putative uncharacterized protein n=4 Tax=Helicob... 48 3e-04 UniRef50_B2UJ25 Transcriptional regulator, Crp/Fnr family n=10 T... 47 4e-04 UniRef50_B8D2C4 Putative transcriptional regulator, Crp/Fnr fami... 47 4e-04 UniRef50_D1PKF6 Putative cyclic nucleotide-binding domain protei... 47 5e-04 UniRef50_B6BLA3 Transcription regulator n=1 Tax=Campylobacterale... 47 5e-04 UniRef50_A3WI44 Transcriptional regulator, Crp/Fnr family protei... 47 6e-04 UniRef50_B8GAV8 Transcriptional regulator, Crp/Fnr family n=3 Ta... 46 8e-04 UniRef50_A7NFZ8 Transcriptional regulator, Crp/Fnr family n=6 Ta... 46 8e-04 UniRef50_Q7NVL2 Putative uncharacterized protein n=1 Tax=Chromob... 46 0.001 UniRef50_B3RC77 Putative cyclic nucleotide-binding regulatory pr... 46 0.001 UniRef50_C3AP08 Transcriptional regulator, Crp/Fnr n=3 Tax=Bacil... 45 0.002 UniRef50_C2CK26 Transcriptional regulator n=1 Tax=Anaerococcus t... 45 0.002 UniRef50_C2XKA0 Transcriptional regulator n=2 Tax=Bacillaceae Re... 45 0.002 UniRef50_Q73QG5 Cyclic nucleotide binding domain protein n=2 Tax... 45 0.002 UniRef50_C4K986 Transcriptional regulator, Crp/Fnr family n=1 Ta... 45 0.002 UniRef50_A3XG44 Transcriptional regulator, Crp/Fnr family protei... 44 0.003 UniRef50_A7VTX4 Putative uncharacterized protein n=2 Tax=Clostri... 44 0.003 UniRef50_A9WTJ5 Transcription regulator, crp family n=122 Tax=Ac... 44 0.003 UniRef50_C4XL82 Crp family transcriptional regulator n=2 Tax=Des... 44 0.003 UniRef50_Q2T0J6 Transcriptional regulator, putative n=61 Tax=Pro... 44 0.004 UniRef50_C0QTS3 Transcriptional regulator, Crp/Fnr family n=1 Ta... 44 0.004 UniRef50_Q67K68 Putative cyclic nucleotide-binding transcription... 44 0.005 UniRef50_C8P8H9 Putative uncharacterized protein n=1 Tax=Lactoba... 44 0.005 UniRef50_B5YAP2 Cyclic nucleotide-binding:Bacterial regulatory p... 44 0.005 UniRef50_C1I2I0 Transcriptional regulatory protein n=1 Tax=Clost... 43 0.006 UniRef50_Q3ZWV2 Transcriptional regulator cNTP-binding, Crp n=2 ... 42 0.011 UniRef50_A5VPJ1 Nitrogen fixation regulation protein fixk n=41 T... 42 0.012 UniRef50_A0NZG3 CAMP-binding protein-catabolite gene activator a... 42 0.013 UniRef50_C1SKM4 cAMP-binding protein n=1 Tax=Denitrovibrio aceti... 42 0.013 UniRef50_A6L679 Transcriptional regulator n=24 Tax=Bacteroidales... 42 0.013 UniRef50_C9YCU2 Putative uncharacterized protein n=1 Tax=Curviba... 42 0.014 UniRef50_Q023C9 Transcriptional regulator, Crp/Fnr family n=2 Ta... 42 0.015 UniRef50_B8HWS4 Cyclic nucleotide-binding protein n=1 Tax=Cyanot... 42 0.018 UniRef50_A1VYI2 Transcriptional regulator, putative n=15 Tax=Cam... 41 0.024 UniRef50_A3EW66 Putative transcriptional regulator, Crp/Fnr fami... 41 0.024 UniRef50_A0LNW4 Transcriptional regulator, Crp/Fnr family n=3 Ta... 41 0.025 UniRef50_Q7V424 Possible mechanosensitive ion channel n=1 Tax=Pr... 41 0.033 UniRef50_A3I3X5 CAMP-binding domains-Catabolite gene activator a... 41 0.033 UniRef50_A8U8V8 Transcription regulator n=1 Tax=Carnobacterium s... 41 0.033 UniRef50_B6IXV7 Transcriptional regulator, Crp n=1 Tax=Rhodospir... 41 0.036 UniRef50_A6FY92 Cyclic nucleotide-binding:Bacterial regulatory p... 40 0.038 UniRef50_P74678 DNR protein n=1 Tax=Synechocystis sp. PCC 6803 R... 40 0.039 UniRef50_B1I644 Cyclic nucleotide-binding protein n=1 Tax=Candid... 40 0.040 UniRef50_C0QS01 Transcriptional regulator, Crp/Fnr family n=1 Ta... 40 0.044 UniRef50_C2H745 Possible cyclic nucleotide-binding protein (Frag... 40 0.047 UniRef50_B6J587 CAAX amino terminal protease family n=3 Tax=Coxi... 40 0.053 UniRef50_C6WVL6 Transcriptional regulator, Crp/Fnr family n=1 Ta... 40 0.055 UniRef50_C3RK73 CRP/FNR family transcriptional regulator n=3 Tax... 40 0.057 UniRef50_A6Q6Z4 Transcriptional regulator, Crp/Fnr family n=1 Ta... 40 0.063 UniRef50_Q3M891 Transcriptional regulator, Crp/Fnr family n=2 Ta... 40 0.080 UniRef50_D0XU25 Transcriptional regulator, Crp/Fnr family n=1 Ta... 40 0.082 UniRef50_C0D6I1 Putative uncharacterized protein n=1 Tax=Clostri... 39 0.084 UniRef50_A9NH90 Transcriptional regulator, Crp/Fnr family n=1 Ta... 39 0.090 UniRef50_C6PUD3 Cyclic nucleotide-binding protein n=1 Tax=Clostr... 39 0.090 >UniRef50_P0A9F0 Regulatory protein nsr n=59 Tax=Enterobacteriaceae RepID=NSR_ECO57 Length = 219 Score = 456 bits (1174), Expect = e-127, Method: Compositional matrix adjust. Identities = 219/219 (100%), Positives = 219/219 (100%) Query: 1 MSESAFKDCFLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSL 60 MSESAFKDCFLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSL Sbjct: 1 MSESAFKDCFLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSL 60 Query: 61 IDFFAAPCFIGEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLS 120 IDFFAAPCFIGEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLS Sbjct: 61 IDFFAAPCFIGEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLS 120 Query: 121 HKNYRNIVSLTQNQSFPLVNRLAAFILLSQEGDLYHEKHTQAAEYLGVSYRHLLYVLAQF 180 HKNYRNIVSLTQNQSFPLVNRLAAFILLSQEGDLYHEKHTQAAEYLGVSYRHLLYVLAQF Sbjct: 121 HKNYRNIVSLTQNQSFPLVNRLAAFILLSQEGDLYHEKHTQAAEYLGVSYRHLLYVLAQF 180 Query: 181 IHDGLLIKSKKGYLIKNRKQLSGLALEMDPENKFSGMMQ 219 IHDGLLIKSKKGYLIKNRKQLSGLALEMDPENKFSGMMQ Sbjct: 181 IHDGLLIKSKKGYLIKNRKQLSGLALEMDPENKFSGMMQ 219 >UniRef50_Q03NI3 Crp-like transcriptional regulator n=1 Tax=Lactobacillus brevis ATCC 367 RepID=Q03NI3_LACBA Length = 226 Score = 230 bits (586), Expect = 3e-59, Method: Compositional matrix adjust. Identities = 108/204 (52%), Positives = 145/204 (71%) Query: 10 FLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDFFAAPCF 69 F TD++A T+L F A+ +IV+E P +++YL +GRA+LY +ANG+V+LIDFF PCF Sbjct: 23 FSTDITAQTQLIKFPAQSFIVKESATPEYIYYLVKGRAKLYDVMANGKVTLIDFFTPPCF 82 Query: 70 IGEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKNYRNIVS 129 IGE+ELI+ +VQAIE+CWCLA+ ++ + LLND +FL+ +C+ L+ KN RNI + Sbjct: 83 IGEMELINPASTLYSVQAIEDCWCLAVSIRDNQSQLLNDPVFLKHVCIYLAQKNTRNIET 142 Query: 130 LTQNQSFPLVNRLAAFILLSQEGDLYHEKHTQAAEYLGVSYRHLLYVLAQFIHDGLLIKS 189 +QNQSF L RLAAFILL+ Y EKHTQ A YLGVSYRHLLYVLAQF+ G L+K Sbjct: 143 ASQNQSFSLAERLAAFILLTTYHHHYAEKHTQVAAYLGVSYRHLLYVLAQFVKAGYLVKD 202 Query: 190 KKGYLIKNRKQLSGLALEMDPENK 213 K GYL+ N L L+ ++ N+ Sbjct: 203 KPGYLVTNGTALQELSRDVTNSNR 226 >UniRef50_D1ART3 Transcriptional regulator, Crp/Fnr family n=1 Tax=Sebaldella termitidis ATCC 33386 RepID=D1ART3_SEBTE Length = 227 Score = 223 bits (568), Expect = 3e-57, Method: Compositional matrix adjust. Identities = 111/211 (52%), Positives = 146/211 (69%) Query: 1 MSESAFKDCFLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSL 60 + S F + F + +L F +YI++E PS LF+LT GRA+LY TLANG+++L Sbjct: 14 IQRSGFMNFFSFPADSFVKLVTFSPNEYIIEESLLPSHLFFLTSGRAKLYTTLANGKIAL 73 Query: 61 IDFFAAPCFIGEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLS 120 IDFF APCF+GE+EL+ + +VQAIE C CLALP+ R +LL D +FLRK+C+ L Sbjct: 74 IDFFRAPCFVGEMELVGHTQDICSVQAIEPCVCLALPILQCREMLLTDPVFLRKICLYLG 133 Query: 121 HKNYRNIVSLTQNQSFPLVNRLAAFILLSQEGDLYHEKHTQAAEYLGVSYRHLLYVLAQF 180 KN RNI SLT+NQ++ L NRLA FILLS D+Y EKH+ AA+YLGVSYRHLLYV+AQF Sbjct: 134 GKNARNIRSLTKNQAYTLENRLAGFILLSTATDIYKEKHSHAADYLGVSYRHLLYVMAQF 193 Query: 181 IHDGLLIKSKKGYLIKNRKQLSGLALEMDPE 211 I G L K + Y I +++ L LA +DP+ Sbjct: 194 IEKGFLKKENRIYRIADKQALLELAHVVDPD 224 >UniRef50_C6LEY7 Regulatory protein nsr n=1 Tax=Bryantella formatexigens DSM 14469 RepID=C6LEY7_9FIRM Length = 229 Score = 183 bits (464), Expect = 4e-45, Method: Compositional matrix adjust. Identities = 92/205 (44%), Positives = 130/205 (63%) Query: 8 DCFLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDFFAAP 67 D F D+ T + F + + ++QEG+ P +L+YLT GRA+L+ + NGR+SLI+F AP Sbjct: 21 DFFSFDIRPYTSIIRFDSEENLLQEGETPRFLYYLTEGRAKLFLSHGNGRISLINFLDAP 80 Query: 68 CFIGEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKNYRNI 127 CFIGE+EL V AI C C A+ ++ + +L+DT FLR LC+ LS K N Sbjct: 81 CFIGEMELFGAQKTANGVTAITPCICYAIRIRDCKERILSDTKFLRCLCMLLSRKAVGNT 140 Query: 128 VSLTQNQSFPLVNRLAAFILLSQEGDLYHEKHTQAAEYLGVSYRHLLYVLAQFIHDGLLI 187 + ++NQS+ L RLA FILL+ +Y EKHT+ +E+LGV+YRHLLYVLA F+ G L Sbjct: 141 CNYSKNQSYSLEVRLADFILLTSCNRMYREKHTEVSEFLGVTYRHLLYVLADFVKRGYLK 200 Query: 188 KSKKGYLIKNRKQLSGLALEMDPEN 212 K+ +GYLI++ L LA + N Sbjct: 201 KTDRGYLIQDMDALRKLAENITGGN 225 >UniRef50_A0RLJ1 Cyclic nucleotide-binding domain protein n=37 Tax=Bacillus cereus group RepID=A0RLJ1_BACAH Length = 223 Score = 180 bits (456), Expect = 3e-44, Method: Compositional matrix adjust. Identities = 95/203 (46%), Positives = 124/203 (61%) Query: 6 FKDCFLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDFFA 65 F F D+ L F ++ I +EG +L+YL G+A++Y + NGRVSLI+F Sbjct: 19 FHTFFSFDILPYAELHSFQKKERICREGVDVPYLYYLISGKAKIYMSHKNGRVSLINFIQ 78 Query: 66 APCFIGEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKNYR 125 AP FIGE+ LI + + V+ IEEC CL LP+K R LLL D FL+KLC + K Sbjct: 79 APSFIGELGLIGVESVTKTVEVIEECMCLVLPLKDCRHLLLQDATFLQKLCKFIGEKTIT 138 Query: 126 NIVSLTQNQSFPLVNRLAAFILLSQEGDLYHEKHTQAAEYLGVSYRHLLYVLAQFIHDGL 185 S +N S+P NRLAAFILL+++ + Y EKHT+A+EYL VSYRHLLYVL QF Sbjct: 139 RTESYAKNNSYPFENRLAAFILLTEQNNSYTEKHTEASEYLNVSYRHLLYVLNQFCQQHY 198 Query: 186 LIKSKKGYLIKNRKQLSGLALEM 208 L K + Y I +R QL LA E+ Sbjct: 199 LKKDGRTYYIHDRIQLEKLADEL 221 >UniRef50_A3IBY0 DNA-binding transcriptional activator of stationary phase nitrogen survival n=3 Tax=Firmicutes RepID=A3IBY0_9BACI Length = 220 Score = 170 bits (431), Expect = 3e-41, Method: Compositional matrix adjust. Identities = 89/201 (44%), Positives = 126/201 (62%), Gaps = 1/201 (0%) Query: 8 DCFLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDFFAAP 67 D F D+ + F ++I QEG P L+Y+ G+A+LY T NG+VSLI++ P Sbjct: 20 DFFSFDIDPYLEVCEFDKGEWIFQEGSFPETLYYMIEGKAKLYMTHKNGKVSLIEYLEGP 79 Query: 68 CFIGEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKNYRNI 127 F+GEIEL+++ + +Q + + C ++ + + LL D LFLR+LCV L K + Sbjct: 80 LFMGEIELLNEARYTKGIQTVTKTICYSIT-QSCKEKLLADVLFLRRLCVFLGEKATKMT 138 Query: 128 VSLTQNQSFPLVNRLAAFILLSQEGDLYHEKHTQAAEYLGVSYRHLLYVLAQFIHDGLLI 187 TQNQ++P +RLAAFI LS + +Y EKHT+ EYLGVSYRHLLYVLAQF + +L Sbjct: 139 SKYTQNQAYPFESRLAAFIQLSADQGVYKEKHTEICEYLGVSYRHLLYVLAQFCEEKILE 198 Query: 188 KSKKGYLIKNRKQLSGLALEM 208 K K GY I + K+L+ LA E+ Sbjct: 199 KRKTGYHIIDEKRLAQLAQEI 219 >UniRef50_Q814L9 Catabolite gene activator n=33 Tax=Bacillus RepID=Q814L9_BACCR Length = 223 Score = 169 bits (429), Expect = 5e-41, Method: Compositional matrix adjust. Identities = 89/208 (42%), Positives = 125/208 (60%) Query: 1 MSESAFKDCFLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSL 60 M F F V L F ++ I EG +L+YL G+A++Y + NG+VSL Sbjct: 14 MQIHQFHTLFSFHVLPYVELHSFQTKEMICSEGNTLPYLYYLISGKAKIYMSHKNGKVSL 73 Query: 61 IDFFAAPCFIGEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLS 120 I+F AP FIGE+ LI ++ ++V+ +E+C CLALP+K + LLL D FL+ LC + Sbjct: 74 INFIQAPSFIGELGLIGVENITKSVEVLEDCVCLALPLKDCQQLLLQDATFLQHLCKFIG 133 Query: 121 HKNYRNIVSLTQNQSFPLVNRLAAFILLSQEGDLYHEKHTQAAEYLGVSYRHLLYVLAQF 180 K + +N S+P NRLAAFILL+++ + Y EKHT+A+EYL VSYRHLLYVL +F Sbjct: 134 EKTITRTENYAKNYSYPFENRLAAFILLTEQNNCYIEKHTEASEYLNVSYRHLLYVLNRF 193 Query: 181 IHDGLLIKSKKGYLIKNRKQLSGLALEM 208 L K + Y I++R L LA E+ Sbjct: 194 CQQNYLRKEGRTYYIQDRNTLEKLADEL 221 >UniRef50_Q2BCV7 Cyclic nucleotide-binding domain protein n=2 Tax=Bacillus RepID=Q2BCV7_9BACI Length = 231 Score = 164 bits (416), Expect = 2e-39, Method: Compositional matrix adjust. Identities = 85/185 (45%), Positives = 119/185 (64%), Gaps = 1/185 (0%) Query: 22 HFLARD-YIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDFFAAPCFIGEIELIDKDH 80 H RD +I++EG +P +LFY+ G+A++Y T NG+VSLI+F +IGE+EL+ + + Sbjct: 33 HEYQRDEWIIREGMRPDYLFYVIEGKAKIYITYQNGKVSLINFINTHDYIGEMELLHEVY 92 Query: 81 EPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKNYRNIVSLTQNQSFPLVN 140 + +QA C A+P+ YR +L DTLFLR+L LS K +Q+ +FPL N Sbjct: 93 YTKGIQASTRTICFAIPLTQYRNQMLEDTLFLRELTKFLSLKATNMAAKYSQSLAFPLEN 152 Query: 141 RLAAFILLSQEGDLYHEKHTQAAEYLGVSYRHLLYVLAQFIHDGLLIKSKKGYLIKNRKQ 200 RLA FIL + +GDLY EKH ++LGVSYRHLL+VLAQF G L K YL+++R + Sbjct: 153 RLADFILQTADGDLYKEKHVTVCDFLGVSYRHLLHVLAQFCEQGYLRKEGMRYLVESRGR 212 Query: 201 LSGLA 205 L LA Sbjct: 213 LEELA 217 >UniRef50_C0X6Y2 Cyclic nucleotide-binding domain protein n=22 Tax=Enterococcus faecalis RepID=C0X6Y2_ENTFA Length = 221 Score = 123 bits (309), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 72/208 (34%), Positives = 113/208 (54%), Gaps = 11/208 (5%) Query: 2 SESAFKDCFLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLI 61 +E+ K F+ D F +++I + + ++LFYL +G+A++ T NGR S++ Sbjct: 22 NETDLKHSFIID---------FENQEFIHHQAEPLNYLFYLIKGKAKILKTERNGRQSIV 72 Query: 62 DFFAAPCFIGEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSH 121 F A IG++ L+ + + V A+ E CLA+P+ + +L N LF+++L L Sbjct: 73 QFLTAGDLIGDLTLVQAETITKDVIALGETCCLAVPLAYAETVLKNKVLFMQQLSHYLGK 132 Query: 122 KNYRNIVSLTQNQSFPLVNRLAAFILL-SQEGDLYHEKHTQAAEYLGVSYRHLLYVLAQF 180 K + + T NQ++ L RLA +L+ + D+Y EKHT+ AEYLGVSYRHL+Y QF Sbjct: 133 KMLQRVDHFTTNQTYELSYRLAELLLVAANHEDVYKEKHTEIAEYLGVSYRHLIYTFKQF 192 Query: 181 IHDGLLIKSKKGYLIKNRKQLSGLALEM 208 G + K Y I NR L +M Sbjct: 193 RERGFIQKQGTAYHI-NRLALHSFVQKM 219 >UniRef50_B0ABB5 Putative uncharacterized protein n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0ABB5_9CLOT Length = 238 Score = 113 bits (282), Expect = 5e-24, Method: Compositional matrix adjust. Identities = 67/200 (33%), Positives = 110/200 (55%), Gaps = 2/200 (1%) Query: 8 DCFLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDFFAAP 67 + F +D+ + HF ++I G++ +L+ G++++Y T NG+ L+ F++ Sbjct: 34 EIFSSDIYPYMEIHHFKKNEHICLSGEELKYLYLFVEGKSKVYITTPNGKSLLVRFYSPV 93 Query: 68 CFIGEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKNYRNI 127 +GEIEL++K +QAI +C C+A+P K L D+ FL + L+ K Sbjct: 94 QIVGEIELLNKIEFQCNIQAIRDCICIAVPRKIIEEKYLKDSKFLHYISTHLALKLASLS 153 Query: 128 VSLTQNQSFPLVNRLAAFILLS--QEGDLYHEKHTQAAEYLGVSYRHLLYVLAQFIHDGL 185 VS + N +PL NRLA++IL S E E TQ AE+LG SYRHLL V+ +F + + Sbjct: 154 VSNSVNILYPLENRLASYILASYTSEDSNNTENLTQIAEFLGTSYRHLLRVVKEFELEKI 213 Query: 186 LIKSKKGYLIKNRKQLSGLA 205 + + K +I ++ +L LA Sbjct: 214 IKRDNKKLVILDKDKLEDLA 233 >UniRef50_C9A6F2 Cyclic nucleotide-binding domain-containing protein n=3 Tax=Enterococcus casseliflavus RepID=C9A6F2_ENTCA Length = 223 Score = 112 bits (279), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 66/183 (36%), Positives = 98/183 (53%) Query: 13 DVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDFFAAPCFIGE 72 ++ + L+ F R+ I +E S F L G+A++ T NG+ +L+ F IG+ Sbjct: 26 EILQQSALWTFDHREAIQKETVPMSVFFVLLTGKAKIIQTQENGKRALLQFLHPGDCIGD 85 Query: 73 IELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKNYRNIVSLTQ 132 + LI + P+ V AI E CL +PM+ L+ D F++ L T+ K + + Sbjct: 86 LTLIGAETVPKTVVAIGETTCLGIPMQAAAHGLMQDLAFVQTLGKTIGEKLLLRMDHFSV 145 Query: 133 NQSFPLVNRLAAFILLSQEGDLYHEKHTQAAEYLGVSYRHLLYVLAQFIHDGLLIKSKKG 192 NQ++PL RLA +L + DL+ EK T+ AEYLGVSYRHL Y L F L+ K+ G Sbjct: 146 NQTYPLAWRLAHLLLEASIDDLFQEKLTETAEYLGVSYRHLTYTLKDFKTQKLVTKTADG 205 Query: 193 YLI 195 Y I Sbjct: 206 YRI 208 >UniRef50_A0RGL8 Cyclic nucleotide-binding domain protein n=90 Tax=Firmicutes RepID=A0RGL8_BACAH Length = 243 Score = 111 bits (277), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 65/215 (30%), Positives = 112/215 (52%), Gaps = 7/215 (3%) Query: 1 MSESAFKDCFLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSL 60 M ++ F D++ L F ++I +E ++ +L++ G+A+ + TL+NG+ L Sbjct: 27 MKQNNIDSFFSNDMNPYMELIFFKKNEFICRENEEIDYLYFFVEGKAKAFNTLSNGKSVL 86 Query: 61 IDFFAAPCFIGEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLS 120 + F+ + +G++ELI VQ + + +C+ LP+ R L +D FLR +C +L+ Sbjct: 87 LCFYDSLQLLGDVELIHSQKTASNVQVMADSYCVGLPLGKVRNQLFHDAKFLRCICGSLA 146 Query: 121 HKNYRNIVSLTQNQSFPLVNRLAAFILLSQEGDLYHEKH-------TQAAEYLGVSYRHL 173 HK R + T N +PL NRLA+++L + E + H T+ AE LG SYRHL Sbjct: 147 HKLNRLSKNSTINLLYPLENRLASYMLAAGERAVQHGNRIVFSGNLTETAELLGTSYRHL 206 Query: 174 LYVLAQFIHDGLLIKSKKGYLIKNRKQLSGLALEM 208 L L F ++ K+ + + N L LA ++ Sbjct: 207 LRTLNIFCDKEIIKKNNGCFEVVNVDVLRELAADV 241 >UniRef50_A6LU88 Cyclic nucleotide-binding protein n=3 Tax=Clostridium RepID=A6LU88_CLOB8 Length = 230 Score = 108 bits (271), Expect = 9e-23, Method: Compositional matrix adjust. Identities = 63/212 (29%), Positives = 114/212 (53%), Gaps = 7/212 (3%) Query: 1 MSESAFKDCFLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSL 60 ++++ ++ F D+ L+ F +YI +E + +++L G+A++ L NG+ L Sbjct: 14 INKNKLENLFSEDMGRYMELYMFNKNEYICREEEILENMYFLVEGKAKVSKHLENGKSLL 73 Query: 61 IDFFAAPCFIGEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLS 120 I F++ IG+ E + + +VQAI++ +C+ + R +L+ND FL LC LS Sbjct: 74 ISFYSPITIIGDAEFVRNNPTDCSVQAIKDTYCIGIRFDIVRKILINDCKFLVNLCSYLS 133 Query: 121 HKNYRNIVSLTQNQSFPLVNRLAAFILLSQEGD-------LYHEKHTQAAEYLGVSYRHL 173 K + + + N +PL NRLA++I+ E + ++ E + + AE LG SYRHL Sbjct: 134 EKLTNSSTNTSINLLYPLENRLASYIIAFSEIENSNTRKIIFRENYIEIAELLGTSYRHL 193 Query: 174 LYVLAQFIHDGLLIKSKKGYLIKNRKQLSGLA 205 L + +G+L ++ K Y I++ +L LA Sbjct: 194 SRTLNKLCLEGILKRNNKEYFIQDYDKLLYLA 225 >UniRef50_A2RKL5 Cyclic nucleotide-binding domain protein n=1 Tax=Lactococcus lactis subsp. cremoris MG1363 RepID=A2RKL5_LACLM Length = 218 Score = 107 bits (267), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 62/181 (34%), Positives = 96/181 (53%), Gaps = 1/181 (0%) Query: 20 LFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDFFAAPCFIGEIELIDKD 79 + +F + I+ E + ++Y+ G+A++ NG+ L+ F +IGE+ ++ + Sbjct: 31 IVNFKHNETIIHENEPLKNIYYIIDGKAKITDIQYNGKSILLQFLKNKDWIGELTILGVE 90 Query: 80 HEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKNYRNIVSLTQNQSFPLV 139 E + V AI CL +P+ LL D F ++L V LS K ++NQS+ L Sbjct: 91 EETKNVTAIGNLTCLMIPLNIVERYLLIDINFFKELSVFLSKKLLDRTNHFSKNQSYELK 150 Query: 140 NRLAAFILLSQEGDLYHEKHTQAAEYLGVSYRHLLYVLAQFIHDGLLIK-SKKGYLIKNR 198 +RLA F+L S D+Y E H AEYLGVSYRHLL + + F G + K K Y I ++ Sbjct: 151 HRLATFLLESSNNDIYQESHIVVAEYLGVSYRHLLQIFSDFKSLGYIEKIGKNNYKINHQ 210 Query: 199 K 199 K Sbjct: 211 K 211 >UniRef50_C8ZXE5 Cyclic nucleotide-binding domain-containing protein n=1 Tax=Enterococcus gallinarum EG2 RepID=C8ZXE5_ENTGA Length = 219 Score = 105 bits (262), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 63/194 (32%), Positives = 103/194 (53%), Gaps = 2/194 (1%) Query: 10 FLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDFFAAPCF 69 F T + ++ F + I +E + L+ + G+A++ + ANG+ S++ F + F Sbjct: 19 FSTGTLEQSSVYEFSHNEIIQEEAGTLTHLYVILEGKAKIIKSQANGKRSILQFLHSGDF 78 Query: 70 IGEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKNYRNIVS 129 IG++ L+ + + V AI CLALP+ H + +L+ D F++ + + K R + Sbjct: 79 IGDLTLVSAEKTTKEVLAIGPTVCLALPIDHAKQVLMQDIDFVKMISQYIGDKLIRRMEH 138 Query: 130 LTQNQSFPLVNRLAAFILLSQEGDLYHEKHTQAAEYLGVSYRHLLYVLAQFIHDGLLIKS 189 + NQ++ L RLA +L +Y EK T+ AEYLGVSYRHL Y L F + + + Sbjct: 139 FSINQTYQLNYRLALLLLEVAVAGIYQEKLTETAEYLGVSYRHLTYTLKTFKENDCVYRE 198 Query: 190 KKGYLIK--NRKQL 201 +GY I N KQL Sbjct: 199 SRGYRINEANLKQL 212 >UniRef50_Q3D9B2 Cyclic nucleotide-binding domain protein n=11 Tax=Streptococcus RepID=Q3D9B2_STRAG Length = 214 Score = 101 bits (252), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 58/191 (30%), Positives = 99/191 (51%) Query: 17 DTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDFFAAPCFIGEIELI 76 D ++ A + ++G+Q +L Y+ +GR ++ L NG+ ++D P IG+IEL+ Sbjct: 23 DLQVITLTAGQSVCKQGEQLEYLHYIVKGRFKIVRRLFNGKEHILDIKTKPTLIGDIELL 82 Query: 77 DKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKNYRNIVSLTQNQSF 136 +V A+E+ + L +K + LL D FL KL L+ + + + N + Sbjct: 83 TNRQIVSSVIALEDITVIQLSLKGRKEKLLTDATFLLKLSQELAQAFHDQNIKASTNLGY 142 Query: 137 PLVNRLAAFILLSQEGDLYHEKHTQAAEYLGVSYRHLLYVLAQFIHDGLLIKSKKGYLIK 196 + LA+ IL +E +H + + A+ G+SYRHLL V+ + +GL+ K K Y IK Sbjct: 143 TVKELLASHILAIEEQGCFHLELSSLADSFGISYRHLLRVIHDMVKEGLIQKEKPKYFIK 202 Query: 197 NRKQLSGLALE 207 NR L L ++ Sbjct: 203 NRFALESLNIQ 213 >UniRef50_C0D933 Putative uncharacterized protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0D933_9CLOT Length = 232 Score = 100 bits (248), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 69/216 (31%), Positives = 111/216 (51%) Query: 1 MSESAFKDCFLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSL 60 + E+ F F D+ R+ + +YI++ Q + + YL RG A+LY NGR SL Sbjct: 16 LKENGFLLHFSFDIRPYLRVTEYEKGEYIIRNTDQLTRILYLVRGTAKLYGFHKNGRQSL 75 Query: 61 IDFFAAPCFIGEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLS 120 I+FF P F G EL +++ P + A +C + + + R LL D FLR C Sbjct: 76 INFFTPPSFFGVPELFEENKRPFPIVAQTKCRFIEVDTRGCRAALLQDAQFLRFCCSMAL 135 Query: 121 HKNYRNIVSLTQNQSFPLVNRLAAFILLSQEGDLYHEKHTQAAEYLGVSYRHLLYVLAQF 180 +N ++P N LAA +LL Q + K+T+ AEYL +SYRHL+ ++++ Sbjct: 136 KQNVAQNHRYMCLTAYPSRNNLAACLLLLQNDGVLSVKYTEIAEYLTISYRHLMQLISEL 195 Query: 181 IHDGLLIKSKKGYLIKNRKQLSGLALEMDPENKFSG 216 + +L + KG I + +Q+ LA EM ++ +G Sbjct: 196 CEERILERVPKGLRILDWEQVRALADEMREDDHGAG 231 >UniRef50_Q0TU94 Cyclic nucleotide-binding domain protein n=8 Tax=Clostridium perfringens RepID=Q0TU94_CLOP1 Length = 223 Score = 99.8 bits (247), Expect = 6e-20, Method: Compositional matrix adjust. Identities = 53/192 (27%), Positives = 109/192 (56%), Gaps = 1/192 (0%) Query: 19 RLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDFFAAPCFIGEIELIDK 78 L F ++I ++ ++L++ G+A++Y TL NG+ L++F+ IG++ELI K Sbjct: 32 ELHMFKKNEHICFMNEELNYLYFFVHGKAKVYKTLPNGKSLLLEFYEPVQLIGDLELISK 91 Query: 79 DHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKNYRNIVSLTQNQSFPL 138 V+A++ C+A+P++ + L D FL + LS+K + V+ + ++PL Sbjct: 92 IKANCNVKALKSSLCIAIPIQAVNSIALKDLNFLMYITKNLSNKLAKCSVTSSITITYPL 151 Query: 139 VNRLAAFIL-LSQEGDLYHEKHTQAAEYLGVSYRHLLYVLAQFIHDGLLIKSKKGYLIKN 197 +LA+++L ++ + + ++ A+ LG SYRHL VL + + G+++K K I N Sbjct: 152 ETKLASYLLAMNSNNIIMIDNYSNLADLLGTSYRHLNRVLNKLVEKGIILKDKNEIKILN 211 Query: 198 RKQLSGLALEMD 209 +++L + ++++ Sbjct: 212 KEELENICVDLN 223 >UniRef50_D0AGV6 Predicted protein n=2 Tax=Enterococcus RepID=D0AGV6_ENTFC Length = 227 Score = 99.0 bits (245), Expect = 9e-20, Method: Compositional matrix adjust. Identities = 57/200 (28%), Positives = 104/200 (52%), Gaps = 1/200 (0%) Query: 6 FKDCFLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDFFA 65 +D +D+ A L F ++++Q G+ +L++L G +Y+ ++ + ID+ Sbjct: 19 LQDYMDSDILAMASLLFFEKEEHLIQTGKTSDYLYFLVDGTVMVYSYSSDTQNICIDYAK 78 Query: 66 APCFIGEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKNYR 125 +GE + + +V+A+ +C C+++P+ YR L D FL+ +C LS++ Sbjct: 79 PATPLGEASSLWELSPKSSVKAVTKCICISIPLNQYRTQLQKDVRFLQNICQLLSYR-LN 137 Query: 126 NIVSLTQNQSFPLVNRLAAFILLSQEGDLYHEKHTQAAEYLGVSYRHLLYVLAQFIHDGL 185 + ++L + + P+ RLA FIL E + + + T A L VSYRHLL + F + + Sbjct: 138 SGINLANSLTEPVETRLAKFILTHHENERFSFRLTTCASILNVSYRHLLRTITNFREENI 197 Query: 186 LIKSKKGYLIKNRKQLSGLA 205 + K K YLI + + L LA Sbjct: 198 IEKKKNYYLIHDIEALEDLA 217 >UniRef50_C9A466 Cyclic nucleotide-binding domain-containing protein n=4 Tax=Enterococcus RepID=C9A466_ENTGA Length = 223 Score = 97.8 bits (242), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 61/208 (29%), Positives = 106/208 (50%), Gaps = 7/208 (3%) Query: 4 SAFKDCF-----LTDVSADTRLFHFLARD-YIVQEGQQPSWLFYLTRGRARLYATLANGR 57 SA+ D F L +D + H +D +++Q G +L++L G +Y+ ++ + Sbjct: 11 SAYIDTFSLQNYLDAALSDMAVLHSFDKDEHLIQTGTVSDYLYFLVEGTVMVYSYPSDTQ 70 Query: 58 VSLIDFFAAPCFIGEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCV 117 ID+ +GE + + +V+A+ C C+ + + YR +L D FL+ +C Sbjct: 71 NIFIDYAKPATLLGEASSLWELLPKSSVKAVTPCICVCISLNRYRSVLQQDVRFLQNICQ 130 Query: 118 TLSHKNYRNIVSLTQNQSFPLVNRLAAFILLSQEGDLYHEKHTQAAEYLGVSYRHLLYVL 177 LS + + ++L + + P+ RLA FILL +E ++ + T A L VSYRHLL + Sbjct: 131 LLSSR-LNSGINLANSLTEPVETRLAKFILLHEEKGVFTHQLTTCAAVLNVSYRHLLRTI 189 Query: 178 AQFIHDGLLIKSKKGYLIKNRKQLSGLA 205 F + +L K K Y+I++R L LA Sbjct: 190 TNFRENRILEKQKSKYVIRDRSALEVLA 217 >UniRef50_B1HPB0 Regulatory protein nsr n=1 Tax=Lysinibacillus sphaericus C3-41 RepID=B1HPB0_LYSSC Length = 161 Score = 96.7 bits (239), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 49/137 (35%), Positives = 79/137 (57%), Gaps = 1/137 (0%) Query: 8 DCFLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDFFAAP 67 D F D++ + F ++I QEG P L+Y+ G+A+LY T NG+VSLI++ AP Sbjct: 20 DFFSFDINPYIEVCEFDKGEWIFQEGSFPETLYYMIEGKAKLYMTHKNGKVSLIEYLEAP 79 Query: 68 CFIGEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKNYRNI 127 F+GEIEL+++ + +Q + + C ++ + + LL D LFLR+L V L K + Sbjct: 80 RFMGEIELLNEARYTKGIQTVSKTICYSI-TQSCKEKLLADALFLRRLSVFLGEKATKIT 138 Query: 128 VSLTQNQSFPLVNRLAA 144 TQNQ++P +R + Sbjct: 139 SKYTQNQAYPFESRFNS 155 >UniRef50_C3RH00 Cyclic nucleotide-binding protein n=2 Tax=Bacteria RepID=C3RH00_9MOLU Length = 219 Score = 94.7 bits (234), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 60/194 (30%), Positives = 97/194 (50%), Gaps = 9/194 (4%) Query: 20 LFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDFFAAPCFIGEIELIDKD 79 L F ++++ +GQ +L+ L GR + T ANG L F GE+E ++ Sbjct: 27 LCEFSKAEHLLHQGQILEYLYILVSGRIKSCRTTANGTTVLSAFSNPITVTGEVEFLNHH 86 Query: 80 HEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLS----HKNYRNIVSLTQNQS 135 V A++ C + + Y +LL+D +F+R L TLS H N+ +S+ + Sbjct: 87 EVTNDVYALKNTVCFRISVAQYEDILLHDLIFMRYLARTLSNLLYHANHNTAISI----N 142 Query: 136 FPLVNRLAAFILLSQEGDLYHEKHTQAAEYLGVSYRHLLYVLAQFIHDGLLIKSKKG-YL 194 +P+ NRLA++++ S + + + Q AE +G SYR L VL F G L K K+G YL Sbjct: 143 YPVENRLASYLISSAQQLIIKDNFVQVAEMIGCSYRQLQRVLNDFCQCGYLCKVKRGNYL 202 Query: 195 IKNRKQLSGLALEM 208 I + L L ++ Sbjct: 203 ITDESALKALGQDL 216 >UniRef50_C5WE90 Cyclic nucleotide-binding domain protein n=1 Tax=Streptococcus dysgalactiae subsp. equisimilis GGS_124 RepID=C5WE90_STRDG Length = 206 Score = 93.2 bits (230), Expect = 6e-18, Method: Compositional matrix adjust. Identities = 59/180 (32%), Positives = 91/180 (50%), Gaps = 1/180 (0%) Query: 1 MSESAFKDCFLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSL 60 M+ES + +V A +R+ F I++ Q + L+Y+ GRA++Y + +G+ Sbjct: 1 MTESIY-SLVSKEVIAKSRVQIFQHNTAIIKANQTLTHLYYILDGRAKIYHSTEHGKDIF 59 Query: 61 IDFFAAPCFIGEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLS 120 I F +A +IGE+ + + E + V +I E LA+P L +D FL +L + Sbjct: 60 IHFLSANDWIGELTFLGIEEETKQVISIGETCVLAIPKHLVENHLFSDKQFLIELNRFIG 119 Query: 121 HKNYRNIVSLTQNQSFPLVNRLAAFILLSQEGDLYHEKHTQAAEYLGVSYRHLLYVLAQF 180 K +NQS+ L RLA F++ +Y EKH +YLG SYRHLL VL F Sbjct: 120 KKLLDRTHHFVKNQSYDLKYRLATFMIDMSHKAVYSEKHVNVVDYLGTSYRHLLQVLKDF 179 >UniRef50_Q03MP5 Crp-like transcriptional regulator n=4 Tax=Streptococcus RepID=Q03MP5_STRTD Length = 212 Score = 91.3 bits (225), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 60/204 (29%), Positives = 103/204 (50%), Gaps = 6/204 (2%) Query: 3 ESAFKDCFLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLID 62 E F +L+ + T F +YI +GQ + L Y+ GR ++ +L+NG+ +++ Sbjct: 11 EQVFSAPYLSQLQKVT----FQKGNYICTQGQDITELTYILSGRVKIVRSLSNGKEHILE 66 Query: 63 FFAAPCFIGEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHK 122 P +G++EL+ +V A+EE + LP+ + + LL D +FL + L+ Sbjct: 67 MPQQPQLLGDVELMTNQLAGSSVIALEEVQTVQLPLNN-KEALLKDPIFLYHIGRNLAMA 125 Query: 123 NYRNIVSLTQNQSFPLVNRLAAFILLSQEGDLYHEKHTQAAEYLGVSYRHLLYVLAQFIH 182 +R ++ + N S+ + RLA IL +E D++ + + G SYRH+ V+ QFI Sbjct: 126 LHRQGITASTNASYFVKERLATHILNIEEQDIFQLSPSILSSSFGTSYRHVQRVIKQFID 185 Query: 183 DGLLIKSK-KGYLIKNRKQLSGLA 205 G++ K K Y I R L LA Sbjct: 186 QGIIEKKAFKTYRILQRDSLETLA 209 >UniRef50_A9KNS6 Cyclic nucleotide-binding protein n=2 Tax=Clostridiales RepID=A9KNS6_CLOPH Length = 224 Score = 91.3 bits (225), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 53/186 (28%), Positives = 105/186 (56%), Gaps = 9/186 (4%) Query: 21 FHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDFFAAPCFIGEIELIDKDH 80 F A + I+ EG +L ++ G+ ++ +T NG+ ++ ++ + IG++EL+ + Sbjct: 30 LRFEAGENILHEGMPIMYLMFVVTGKVKICSTAKNGKDLVLCYYISDGIIGDLELMTNTY 89 Query: 81 EPRA-VQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKNYRNIVSLTQNQSFPLV 139 + A + AI + C+ALP + Y L N+ FL+++ LS+K ++ +++N F + Sbjct: 90 DATASIIAITDFECIALPYQKYAIDLKNNLAFLKRIGSELSNK----LLRISKNYVFTTL 145 Query: 140 N----RLAAFILLSQEGDLYHEKHTQAAEYLGVSYRHLLYVLAQFIHDGLLIKSKKGYLI 195 + RL ++IL + ++++ T + +G+SYRH+ +L Q DGLL K GY+I Sbjct: 146 HSGEERLCSYILQASHNGIFNDILTDVSCSIGMSYRHMFRLLNQLCTDGLLDKRDNGYII 205 Query: 196 KNRKQL 201 +R++L Sbjct: 206 VDREEL 211 >UniRef50_C7UQ67 Predicted protein n=2 Tax=Enterococcus faecalis RepID=C7UQ67_ENTFA Length = 226 Score = 90.9 bits (224), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 58/194 (29%), Positives = 98/194 (50%), Gaps = 1/194 (0%) Query: 12 TDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDFFAAPCFIG 71 T ++ +L F +++++ Q + L++L G +Y + I + +G Sbjct: 30 TPLAEIGQLVTFEKSEHLIELDQSSNHLYFLLEGNVMIYTPTLEDQKVCISYTHPIALLG 89 Query: 72 EIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKNYRNIVSLT 131 E + K V A C CL +P+ +R L ND LFL+ +C+TLS + + L Sbjct: 90 EASSLWKKSPKSNVLANTACLCLCIPLNEHRTALQNDLLFLQTICLTLSER-LNSGALLA 148 Query: 132 QNQSFPLVNRLAAFILLSQEGDLYHEKHTQAAEYLGVSYRHLLYVLAQFIHDGLLIKSKK 191 + P+ RLA +IL Q+ ++ K T A L VSYRHL ++ QF +GL+ K ++ Sbjct: 149 SSLIEPVDVRLAKYILAHQKNSYFNCKLTTCATTLNVSYRHLTRLITQFKKEGLIQKEQQ 208 Query: 192 GYLIKNRKQLSGLA 205 YLI N ++L+ +A Sbjct: 209 EYLILNPEKLTDIA 222 >UniRef50_B1MYN1 Cyclic AMP receptor protein, putative n=1 Tax=Leuconostoc citreum KM20 RepID=B1MYN1_LEUCK Length = 218 Score = 89.7 bits (221), Expect = 6e-17, Method: Compositional matrix adjust. Identities = 61/192 (31%), Positives = 91/192 (47%), Gaps = 5/192 (2%) Query: 20 LFHFLARDYIV--QEGQQPSWLFYLTRGRARLYATLANGRVSLIDFFAAPCFIGEIELID 77 L HF D I + + L+Y+ +GRA++ G+ +LI F +IGE+E + Sbjct: 25 LTHFKNGDIITTSESNNHTARLYYMVKGRAKVIFLSQEGQTNLIQFLKPNDWIGELEFLT 84 Query: 78 KDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKNYRNIVSLTQNQSFP 137 ++ + V AI + C+ +P LL + +L+ + L+ K + QS+P Sbjct: 85 TENTSKQVIAIGDTTCITIPNVLVNQYLLTNVDYLKNMNQYLTRKLLERTDMMIVGQSYP 144 Query: 138 LVNRLAAFILLSQEGDLYHEKHTQAAEYLGVSYRHLLYVLAQFIHDGLLIKSKKGYLIKN 197 RLA+FIL Y E H YLG+SYRHLL QF LLIK + N Sbjct: 145 FKFRLASFILADTYRGEYSEPHAVVMAYLGISYRHLLNTYQQFETAQLLIKVGRNRYQVN 204 Query: 198 R---KQLSGLAL 206 KQL+G A+ Sbjct: 205 TAKLKQLAGKAI 216 >UniRef50_C6D048 Transcriptional regulator, Crp/Fnr family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D048_PAESJ Length = 234 Score = 87.4 bits (215), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 57/208 (27%), Positives = 104/208 (50%), Gaps = 4/208 (1%) Query: 1 MSESAFKDCFLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSL 60 +++ A D F + + L+ F D + ++G+ P ++F+L RG+ ++Y T A+G+ L Sbjct: 14 LAQYALDDVFPSSLRQHLTLYRFEPDDTLCKQGEIPEYIFFLMRGKVKVYTTSADGKTLL 73 Query: 61 IDFFAAPCFIGEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLS 120 I+F + +GEIE +++ V A+ +A K + L + FL+ + ++ Sbjct: 74 INFTSPLGVLGEIECLNELENLNTVSAVTPVETVAF-HKRWLKLYREEVPFLQFMLHLVT 132 Query: 121 HKNYRNIVSLTQNQSFPLVNRLAAFILLSQEGD---LYHEKHTQAAEYLGVSYRHLLYVL 177 K Y VSL+ N +P+ RLA+++L D + A +G SYRHL ++ Sbjct: 133 EKFYNKSVSLSFNLLYPVEVRLASYLLSVTTPDDARVSTAHLKDMANLIGTSYRHLNRII 192 Query: 178 AQFIHDGLLIKSKKGYLIKNRKQLSGLA 205 F L+ +S+ ++KNR L A Sbjct: 193 LNFTSANLIERSRGTLVVKNRMGLEEAA 220 >UniRef50_A9KSA1 Cyclic nucleotide-binding protein n=2 Tax=Clostridium RepID=A9KSA1_CLOPH Length = 205 Score = 84.7 bits (208), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 49/167 (29%), Positives = 91/167 (54%), Gaps = 9/167 (5%) Query: 40 FYLTRGRARLYATLANGRVSLIDFFAAPCFIGEIELIDKDHEPRAVQAIEECWCLALPMK 99 +++ G ++Y NGR S++DFF + ++GE+ L + E + + +++ CL Sbjct: 37 YFILSGTVKIYIDHKNGRRSILDFFGSNDWLGELSLFCNEAEIKENKVLQDVECLEFDKD 96 Query: 100 HYRPLLLNDT----LFLRKLCVTLSHKNYRNIVSLTQNQSFPLVNRLAAFILLSQEGDLY 155 + L + F + L ++YR ++++ ++ L RLA+F++ Q+ +Y Sbjct: 97 ELQKLCKENAKVSFYFASYIANKLLARSYR----MSESLNYSLDIRLASFVIQHQQKGIY 152 Query: 156 HEKHTQAAEYLGVSYRHLLYVLAQFIHDGLLIKSK-KGYLIKNRKQL 201 HT +EY+ VSYRH+LYV+ QF +L K K KGY+I + ++L Sbjct: 153 SIPHTDVSEYMNVSYRHVLYVMKQFCELEILTKEKGKGYIISDIEKL 199 >UniRef50_C0ZJL4 Probable transcriptional regulator n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0ZJL4_BREBN Length = 232 Score = 83.6 bits (205), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 55/213 (25%), Positives = 102/213 (47%), Gaps = 8/213 (3%) Query: 1 MSESAFKDCFLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSL 60 + S D F + RL+ D + +G Q ++++ +G+ +++ TL NG+ L Sbjct: 14 VQNSPLPDIFDAVTLHEMRLYQAEKGDILCSKGDQLHHMYFILKGKIKIFTTLPNGKSLL 73 Query: 61 IDFFAAPCFIGEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLS 120 + F IG++E + + V+ + ++LP + N FL+ + +S Sbjct: 74 LRFNNPLAIIGDVEYVTQCEVRNTVEFVHRSLVVSLPFHVLQEKYQNHPPFLQFILHKIS 133 Query: 121 HKNYRNIVSLTQNQSFPLVNRLAAFILLSQEGD--------LYHEKHTQAAEYLGVSYRH 172 HK Y + S + N +P+ NR A+++L + D L K T+ AE LG SYRH Sbjct: 134 HKLYTSSNSTSLNLLYPVENRFASYLLSTLSSDTGSTASEELKTAKLTEVAELLGTSYRH 193 Query: 173 LLYVLAQFIHDGLLIKSKKGYLIKNRKQLSGLA 205 L V+ ++ + K +IK+R+++S L+ Sbjct: 194 LNRVIRNLCAASVIERKKSALIIKDREKISELS 226 >UniRef50_B9DTE0 Crp family regulatory protein n=2 Tax=Streptococcus RepID=B9DTE0_STRU0 Length = 222 Score = 81.3 bits (199), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 57/199 (28%), Positives = 97/199 (48%), Gaps = 2/199 (1%) Query: 10 FLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDFFAAPCF 69 F + V D L F + I + Q ++ Y G ++ L NG+ +++ A P Sbjct: 23 FPSTVQKDLHLLLFQKNEAICLQDQDLDFIGYALEGAVKIVRRLPNGKEHVLETHARPSL 82 Query: 70 IGEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKNYRNIVS 129 IG+IEL+ +V A++ + + LP++ + LL D FL ++ L++ Y+ V Sbjct: 83 IGDIELLTNQKAVTSVIALKSTYFIYLPLRDKKK-LLKDPDFLYQIGQVLANNFYQQNVK 141 Query: 130 LTQNQSFPLVNRLAAFILLSQEGDLYHEKHTQAAEYLGVSYRHLLYVLAQFIHDGLLIKS 189 TQN + + RLA IL + ++ + + A+ G SYRHL V+ Q I ++ + Sbjct: 142 STQNMGYTVKERLARHILDQENNGVFGLELSLLADSFGTSYRHLHRVIQQLISQNIIERQ 201 Query: 190 K-KGYLIKNRKQLSGLALE 207 K Y I + K L LAL+ Sbjct: 202 AFKSYCITDFKSLEALALK 220 >UniRef50_C5EL33 Cyclic nucleotide-binding protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EL33_9FIRM Length = 228 Score = 80.9 bits (198), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 64/194 (32%), Positives = 101/194 (52%), Gaps = 3/194 (1%) Query: 13 DVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDFFAAPCFIGE 72 D+ + + L F +Y+V+ G +L +L G + A N + + I + IGE Sbjct: 26 DIFSISELLLFDKNEYLVEAGYPADYLCFLVNGEVIISACSTNDKSTCISYCHQFTIIGE 85 Query: 73 IELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHK-NYRNIVSLT 131 + + R+V+A+ C C+ + + YR LLLND LFL+ +C L+ K N N L+ Sbjct: 86 AASLWQMAPCRSVRAMTRCTCIGINLTKYRQLLLNDLLFLQNICQILTCKLNTEN--ELS 143 Query: 132 QNQSFPLVNRLAAFILLSQEGDLYHEKHTQAAEYLGVSYRHLLYVLAQFIHDGLLIKSKK 191 Q S PL RL+ FIL G ++ + T A+ L SYRHLL +L F G+L K++ Sbjct: 144 QTLSDPLEVRLSRFILEYSIGQMFTFQLTNCADILNTSYRHLLRMLKCFCAMGILKKARN 203 Query: 192 GYLIKNRKQLSGLA 205 Y+I + +L +A Sbjct: 204 CYVIMDGTRLGEIA 217 >UniRef50_UPI0001C3627B cyclic nucleotide-binding protein n=1 Tax=Clostridium hathewayi DSM 13479 RepID=UPI0001C3627B Length = 225 Score = 79.7 bits (195), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 47/183 (25%), Positives = 95/183 (51%), Gaps = 1/183 (0%) Query: 21 FHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDFFAAPCFIGEIELIDKD- 79 F A + +++EG W+ + G A++ T NG+ ++ + + IGEIEL+ + Sbjct: 30 LRFAAGEDVLREGHPIGWIAIVVEGNAKVCRTAPNGKSLILCYNISHGLIGEIELMTRQV 89 Query: 80 HEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKNYRNIVSLTQNQSFPLV 139 + +V+A+ E C+A+ ++ L + +FL KL L+ K + + T Sbjct: 90 NATSSVKAVTELECVAVSYQNCLAELKTNLVFLNKLGTELAEKLTASSDNFTSTALCTGE 149 Query: 140 NRLAAFILLSQEGDLYHEKHTQAAEYLGVSYRHLLYVLAQFIHDGLLIKSKKGYLIKNRK 199 RL A+++ + L+ + T + +G+SYRH+ +L + +G+L K + GY I +++ Sbjct: 150 QRLCAYVIQNSHRGLFCDTLTDVSCSVGMSYRHMFRLLGKLCEEGMLEKRESGYCIVDQE 209 Query: 200 QLS 202 +L+ Sbjct: 210 ELA 212 >UniRef50_C4IGF0 Cyclic nucleotide-binding domain protein n=2 Tax=Clostridium butyricum RepID=C4IGF0_CLOBU Length = 223 Score = 77.0 bits (188), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 54/199 (27%), Positives = 100/199 (50%), Gaps = 13/199 (6%) Query: 17 DTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDFFAAPCFIGEIELI 76 + +L + + I + + S + ++ +G ++Y A G+V + +GE+E Sbjct: 30 EAKLVKYSKNEIICSKDRSISQITFIVKGYVKIYYVSAEGKVLYLALKKDFTMLGEVEFA 89 Query: 77 DKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKNYRNIVSLTQNQSF 136 + P A +++ E +++ Y+ LL D +F R + L+ K +SL+ SF Sbjct: 90 GEIDIPYA-ESVSEVIAVSISTDKYKDLLNEDVVFCRYVIKCLASK-----ISLSAKTSF 143 Query: 137 -----PLVNRLAAFILLSQEGDLYHEKHTQAAEYLGVSYRHLLYVLAQFIHDGLLIKS-K 190 +RLA +IL +++ ++ EK T+ + L SYR L+ +L F DGL+ +S K Sbjct: 144 INQLHSKESRLAIYILTNEKNNVIDEKWTETSNLLAFSYRQLMRLLNNFCEDGLIKRSNK 203 Query: 191 KG-YLIKNRKQLSGLALEM 208 KG Y I NR++L L ++ Sbjct: 204 KGRYEIVNREKLQNLCADL 222 >UniRef50_B7H5E4 Catabolite gene activator n=39 Tax=Bacillus cereus group RepID=B7H5E4_BACC4 Length = 231 Score = 72.8 bits (177), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 50/200 (25%), Positives = 100/200 (50%), Gaps = 18/200 (9%) Query: 19 RLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDFFAAPCFIGEIELIDK 78 +L HF + I + L+++ +G+ ++Y G+ ++ F +G+IELI Sbjct: 30 QLNHFEKGELICNIDDEMDRLYFVVKGKVKVYTITPEGKKLILRFINPLAIVGDIELIQN 89 Query: 79 DHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKNYRNIVSLTQ-----N 133 V+A + +++ R LL+D +F++ L +N N + ++ N Sbjct: 90 SKAHNVVEACSDVVAISISNTVIRNKLLHDPIFMKFLL-----ENIANTLKISTRFTALN 144 Query: 134 QSFPLVNRLAAFIL-LSQE-------GDLYHEKHTQAAEYLGVSYRHLLYVLAQFIHDGL 185 +P+ R+A+++L +S + GDL T A+++GVSYRH++ VL +F ++ L Sbjct: 145 LLYPVEVRVASYLLSISTDSNGNMYKGDLDATSVTSIADFIGVSYRHVIRVLQRFYNEKL 204 Query: 186 LIKSKKGYLIKNRKQLSGLA 205 + KS +IK+ ++ +A Sbjct: 205 IEKSNGVIVIKDFSRMKEVA 224 >UniRef50_C4L0C4 Transcriptional regulator, Crp/Fnr family n=1 Tax=Exiguobacterium sp. AT1b RepID=C4L0C4_EXISA Length = 224 Score = 72.8 bits (177), Expect = 8e-12, Method: Compositional matrix adjust. Identities = 52/176 (29%), Positives = 87/176 (49%), Gaps = 10/176 (5%) Query: 34 QQPSWLFYLTRGRARLYATLANGRVSLIDFFAAPCFIGEIELIDKDHEPRAVQAIEECWC 93 Q LF + GR ++Y G++ L+ AAP IG+IE + V+A+ C Sbjct: 41 QHIESLFVVLEGRVKIYTLSEEGKLRLLRLKAAPTLIGDIEYASGRNVLHTVEAVGPVTC 100 Query: 94 LALPMKHYRPLLLNDTL-FLRKLCVTLSHKNYRNIVSLTQNQSFPLVNRLAAFIL-LSQE 151 L +P + R N T+ F L +S K + + + + L RLA +++ LS+ Sbjct: 101 LRIPFEALRRY--NRTVEFTEHLLRGVSEKLFIEANASSNHLMSTLEERLAGYLISLSES 158 Query: 152 G------DLYHEKHTQAAEYLGVSYRHLLYVLAQFIHDGLLIKSKKGYLIKNRKQL 201 G ++ K + AE+LG SYRHL L F+ +GL+ +++K +I N ++L Sbjct: 159 GNELFQAEMSQLKRKEVAEWLGTSYRHLNRTLQAFVDEGLVKRTRKEVIILNSERL 214 >UniRef50_UPI00018512E8 cyclic nucleotide-binding protein n=1 Tax=Bacillus coahuilensis m4-4 RepID=UPI00018512E8 Length = 231 Score = 71.2 bits (173), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 53/167 (31%), Positives = 83/167 (49%), Gaps = 8/167 (4%) Query: 33 GQQPSWLFYLTRGRARLYATLANGRVSLIDFFAAPCFIGEIELIDKDHEPRAVQAIEECW 92 G+ L++L G+ ++Y L NGR LI F IGE+EL+ K+ +V+ ++E Sbjct: 46 GEDIHHLYFLVSGKLKVYTNLPNGRSLLIRFNQPLSIIGELELVTKEPAKHSVETVQESV 105 Query: 93 CLALPMKHYRPLLLNDTLFLRKLCVTLSHKNYRNIVSLTQNQSFPLVNRLAAFILL---S 149 LA+ + FLR L LS++ Y S + N + NR A++++ Sbjct: 106 LLAVQYDYIYKHHYQHPAFLRYLLHHLSYRLYTASNSSSLNLLTTVENRFASYLMSIYNP 165 Query: 150 QEGDLYHE----KHTQAAEYLGVSYRHLLYVLAQFIHDGLLIKSKKG 192 +EG L E T+ AE LG SYRHL V+ + + +I+ KKG Sbjct: 166 EEGSLVEEIKTANLTETAELLGTSYRHLNRVIKELC-EKKMIQRKKG 211 >UniRef50_A5I0L6 Cyclic nucleotide-binding domain protein n=19 Tax=Clostridium RepID=A5I0L6_CLOBH Length = 229 Score = 66.6 bits (161), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 42/168 (25%), Positives = 82/168 (48%), Gaps = 3/168 (1%) Query: 9 CFLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDFFAAPC 68 F D+ +L + +YI++ + + + G+ ++ NG+ L+ F+ Sbjct: 22 IFDKDILKYAQLHFYEKEEYILKAESNLEYYYLIVDGKIKISYPFENGKPMLLKFYKDFN 81 Query: 69 FIGEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKNYRNIV 128 IG++E + V A+ + + +A+P R L++ FL L +LS K Y I Sbjct: 82 TIGDLEFLKNIPILCDVDAVGDTYLIAIPSDILRKKYLDNVKFLHHLIDSLSEKLYATIN 141 Query: 129 SLTQNQSFPLVNRLAAFILLSQEGDLY---HEKHTQAAEYLGVSYRHL 173 + + N +PL+NRL+++++ E Y + + A++LG +YRHL Sbjct: 142 NSSYNFVYPLINRLSSYLVEHIEDKNYIILNSSFLEIAQFLGTTYRHL 189 >UniRef50_A8FDX9 Possible Crp family transcriptional regulator n=5 Tax=Bacillales RepID=A8FDX9_BACP2 Length = 226 Score = 65.9 bits (159), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 55/211 (26%), Positives = 103/211 (48%), Gaps = 18/211 (8%) Query: 3 ESAFKDCFLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLID 62 ES F ++ VS L + + + +G + +L+ L +G+ +++ T G+ ++ Sbjct: 20 ESVFHQKLMSHVS----LCRYEQGELVCSKGDKREYLYLLVKGKLKIFTTTKEGKTFILS 75 Query: 63 FFAAPCFIGEIELIDKDHEPRAVQAIEECWCLALP----MKHYR--PLLLNDTLFLRKLC 116 F IG+IE + + V+A+ E L + M+H + P +LN FL K Sbjct: 76 FKHPLEAIGDIEYVQQTDMVNTVEAVTEVHMLRVSHQALMRHAKDDPRVLN---FLLK-- 130 Query: 117 VTLSHKNYRNIVSLTQNQSFPLVNRLAAFIL--LSQEGDLYHEKHTQAAEYLGVSYRHLL 174 +++K Y L+ + +P+ RLA+++L ++ + + T AA +G SYRH+ Sbjct: 131 -GITNKFYTKSNDLSFHLLYPVEVRLASYLLSVVTSDESASALRLTDAASLIGTSYRHIN 189 Query: 175 YVLAQFIHDGLLIKSKKGYLIKNRKQLSGLA 205 V+ QF GL+ + + I +RK L +A Sbjct: 190 RVIQQFCEKGLIERRRGNITISDRKGLLEIA 220 >UniRef50_A0RHC9 Transcriptional regulator, Crp/Fnr family n=5 Tax=Bacillus cereus group RepID=A0RHC9_BACAH Length = 229 Score = 64.3 bits (155), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 45/187 (24%), Positives = 92/187 (49%), Gaps = 6/187 (3%) Query: 25 ARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDFFAAPCFIGEIELIDKDHEPRA 84 A++ ++ EG+ L+ GR ++ +++ G+ L+ F +A +G+IELI Sbjct: 37 AKETVLHEGETIDGLYIQMSGRTKITSSVITGKALLLRFCSAVSIMGDIELIQSVDIQSH 96 Query: 85 VQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKNYRNIVSLTQNQSFPLVNRLAA 144 V + ++ L + + LL+D +FL++L +++K + N P+ R A+ Sbjct: 97 VTSEQQTDFLFIDKNYVTSYLLHDVVFLQELIHHVTYKLQTCTTASRINLLAPVETRFAS 156 Query: 145 FILLSQE-----GDLYHEK-HTQAAEYLGVSYRHLLYVLAQFIHDGLLIKSKKGYLIKNR 198 ++ +Q G H K H + A +G + RHL V+ + I D ++ K+ K ++ + Sbjct: 157 YLCTAQNPSHLFGREIHTKDHHEIASLIGTTTRHLNRVIEKLIADNIIHKNNKQIVVDDW 216 Query: 199 KQLSGLA 205 K + L+ Sbjct: 217 KAIDTLS 223 >UniRef50_C0QQT2 Transcription regulator n=1 Tax=Persephonella marina EX-H1 RepID=C0QQT2_PERMH Length = 208 Score = 61.6 bits (148), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 44/176 (25%), Positives = 80/176 (45%), Gaps = 9/176 (5%) Query: 27 DYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDFFAAPCFIGEIELIDKDHEPRAVQ 86 D I EG P + F+L G ++Y T NG +++ P FIGE +I P + + Sbjct: 31 DIIFWEGDDPKYTFFLIEGVVKIYKTSNNGNDITLNYILPPSFIGEFAVIKGMKYPISAE 90 Query: 87 AIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSH---KNYRNIVSLTQNQSFPLVNRLA 143 + K + + F+R++ + L++ KNY L + + ++A Sbjct: 91 MESNGRLIVFETKGLTKFIEKNKNFMREIIIYLANKIEKNYSYCEDLMEKNA---KKKVA 147 Query: 144 AFILLSQEGDLYHE-KHTQAAEYLGVSYRHLLYVLAQFIHDGLLIKSKKGYLIKNR 198 FI + DL+ KHT+ A L ++ L L + ++GL+++ K + KN+ Sbjct: 148 KFI--KEHEDLFFSLKHTKIASILNITPETLSRTLRELKNEGLIVERKIVKINKNK 201 >UniRef50_Q30QZ1 Putative transcriptional regulator, Crp/Fnr family n=1 Tax=Sulfurimonas denitrificans DSM 1251 RepID=Q30QZ1_SULDN Length = 209 Score = 60.8 bits (146), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 51/178 (28%), Positives = 87/178 (48%), Gaps = 7/178 (3%) Query: 22 HFLARDYIV-QEGQQPSWLFYLTRGRARLYATLANGRVSLIDFFAAPCFIGEIELIDKDH 80 H +++D IV EG +P +L+ L +G +LY T ++ + ++ +F IGE+ + Sbjct: 29 HKVSKDNIVFYEGDEPKYLYLLVKGVIKLYKTSSSHKEIVLKYFHENELIGEVANFENIP 88 Query: 81 EPRAVQAIEECWCLALPMKHYRPLL-LNDTL-FLRKLCVTLSHKNYRNIVSLTQNQSFPL 138 P +A + L + + + ++ LN +L F + + KN NI+S N Sbjct: 89 YPATAKAYSDVEFLKVDFEKLKEVIFLNPSLAFNIQTSLIKKIKNLENIIS--TNLVLDS 146 Query: 139 VNRLAAFILLSQEGDLYHEKHTQAAEYLGVSYRHLLYVLAQFIHDGLLIKSKKGYLIK 196 R+A +I S D + K+ + AE LGVS L +L +F D +I KK Y+ K Sbjct: 147 KERVAKYI-YSHSDDFFETKNIEIAEILGVSPETLSRIL-KFFKDNGIINIKKKYIDK 202 >UniRef50_D1AN20 Putative transcriptional regulator, Crp/Fnr family n=1 Tax=Sebaldella termitidis ATCC 33386 RepID=D1AN20_SEBTE Length = 224 Score = 59.3 bits (142), Expect = 9e-08, Method: Compositional matrix adjust. Identities = 47/183 (25%), Positives = 84/183 (45%), Gaps = 9/183 (4%) Query: 27 DYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDFFAAPCFIGEIELIDKDHEPRAVQ 86 +YI + ++ + + G+ + + G L+ ++ +G+IE +K Q Sbjct: 36 EYIFYQNEEIKNILIIYSGKVGVTLDSSKGHRLLLAIYSPNSMLGDIEFFNKSCTVSNAQ 95 Query: 87 AIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKNYRNIVSLTQNQSFPLVN----RL 142 A+ + + + L N F+ L L+ K RNI +N S ++N ++ Sbjct: 96 ALSDTAVICISYSDIEKLR-NHNEFIYLLGQILAKKLTRNI----KNNSINILNAADIKI 150 Query: 143 AAFILLSQEGDLYHEKHTQAAEYLGVSYRHLLYVLAQFIHDGLLIKSKKGYLIKNRKQLS 202 AA+I E +++ ++ +E LG+SYRHLL L F +G L+K K Y I + L Sbjct: 151 AAYIAGICENNIFDVNLSKLSELLGISYRHLLRRLKAFCENGYLLKIKDAYKITDLNSLK 210 Query: 203 GLA 205 LA Sbjct: 211 ELA 213 >UniRef50_B1YHB5 Cyclic nucleotide-binding protein n=2 Tax=Exiguobacterium RepID=B1YHB5_EXIS2 Length = 222 Score = 58.2 bits (139), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 50/199 (25%), Positives = 92/199 (46%), Gaps = 7/199 (3%) Query: 11 LTDVSADTRLFH-----FLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDFFA 65 LTDV A H F A D++ ++G ++ L G+ ++ A G+ ++ F Sbjct: 15 LTDVFAGGLREHLQPVAFQAGDWLCRQGDAADRMYLLLEGKLKITHMSATGKRLVLSFKH 74 Query: 66 APCFIGEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKNYR 125 +G+IE + + V+A+ +++ ++ LR L T++ K Sbjct: 75 PFDLVGDIEYVRRTPLMNTVEAVTPVKAVSISYAALEQKGADNPALLRFLLETITMKFEL 134 Query: 126 NIVSLTQNQSFPLVNRLAAFIL--LSQEGDLYHEKHTQAAEYLGVSYRHLLYVLAQFIHD 183 S++ N +P+ RLA+++L + L AA+ +G SYRHL VL QF D Sbjct: 135 KSHSMSFNLLYPVEVRLASYLLSMTPETPTLPVSDLVDAADLIGTSYRHLNRVLRQFSQD 194 Query: 184 GLLIKSKKGYLIKNRKQLS 202 L+ ++ + I +R+ L+ Sbjct: 195 NLIERTNRTITIIDREGLT 213 >UniRef50_UPI000197CA44 hypothetical protein PretD1_04436 n=1 Tax=Providencia rettgeri DSM 1131 RepID=UPI000197CA44 Length = 222 Score = 56.2 bits (134), Expect = 8e-07, Method: Compositional matrix adjust. Identities = 46/176 (26%), Positives = 84/176 (47%), Gaps = 9/176 (5%) Query: 19 RLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDFFAAPCFIGEIELIDK 78 +L +Y++ + + +++++L G+ ++ NG+ + F A IG++EL Sbjct: 32 KLLRIDTSEYLISQNDKINFIYFLVVGKLQVERYEINGKHVIFSFENAFSVIGDLELFQN 91 Query: 79 DHEPR-----AVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKNYRNIVSLTQN 133 ++ +QAI EC+ LA P++ + LN +FL+ +C LS K + N L + Sbjct: 92 NNSKNNRIYSTIQAITECYLLAFPLQVIQKKELNSPIFLQFICQHLSKKLF-NASQLHSS 150 Query: 134 QSFPLVNRLAAFILL--SQEGDLYH-EKHTQAAEYLGVSYRHLLYVLAQFIHDGLL 186 SF +L +++ SQ G + E A LG+S R L L + I L+ Sbjct: 151 SSFSAEYKLRRYLIFAESQYGSEFKLENRDSLAAMLGISVRQLNRTLVKLIERKLI 206 >UniRef50_A6EDB2 Putative FNR-family transcriptional regulator protein n=1 Tax=Pedobacter sp. BAL39 RepID=A6EDB2_9SPHI Length = 241 Score = 54.7 bits (130), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 42/189 (22%), Positives = 85/189 (44%), Gaps = 19/189 (10%) Query: 27 DYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDFFAAPCFIGEIELIDKDHEPRAVQ 86 D I +EG PS +FY+ +G + Y +GR +I ++ IG ++ ++ P + Sbjct: 44 DVIFKEGAVPSGIFYIQKGMVKKYKVDRDGREQIIHVASSGELIGYHAILAEERYPDSAS 103 Query: 87 AIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKNYRNIVSLTQNQSFPLVNRLA--- 143 IE C +P + + +L + ++ ++L LSH+ LT N S + R A Sbjct: 104 TIEACSIAFIPKEDFLEVLGSSSILSQRLLKNLSHE----FAVLTNNMS-AMTQRTAREK 158 Query: 144 ---AFILLSQ--------EGDLYHEKHTQAAEYLGVSYRHLLYVLAQFIHDGLLIKSKKG 192 I+L + E + + + + G++ +L+ +L +F ++ +L + Sbjct: 159 VAITLIVLREKYKSMEDNENGIINISRSDLSNMAGIAKENLVRILKEFKNNNILQTEGRK 218 Query: 193 YLIKNRKQL 201 I + K+L Sbjct: 219 ITINDVKKL 227 >UniRef50_A3I0Z6 Putative FNR-family transcriptional regulator protein n=1 Tax=Algoriphagus sp. PR1 RepID=A3I0Z6_9SPHI Length = 218 Score = 54.7 bits (130), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 43/204 (21%), Positives = 92/204 (45%), Gaps = 12/204 (5%) Query: 13 DVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDFFAAPCFIGE 72 ++S + L + EG +P +F + G ++Y T +NG+ ++ F+G Sbjct: 12 NISENKNLISHRKGQILYYEGTKPLGIFCINSGVVKVYKTASNGKEQILHLAKEGDFLGY 71 Query: 73 IELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKNYRNIVSLTQ 132 L+ +++ + +E+ +P + + L N+T F +++ LSH+ LT Sbjct: 72 SALLGEENYSNSAMIVEDAKICFIPKETFLATLFNNTPFFKRITKALSHELGIMEEKLTD 131 Query: 133 NQSFPLVNRLAAFILL-----------SQEGDLYHEKHTQAAEYLGVSYRHLLYVLAQFI 181 + RLA IL +Q+ DL + + A +G + ++ +L++F Sbjct: 132 ATQKSIRERLAFVILQLASSYGVDGGETQKIDLVLSRE-EIAGMVGTATESVIRLLSEFK 190 Query: 182 HDGLLIKSKKGYLIKNRKQLSGLA 205 D L+ K ++K+++ L+ L+ Sbjct: 191 KDNLIELEGKRIIVKDKRGLARLS 214 >UniRef50_Q2SHS2 CAMP-binding protein-catabolite gene activator and regulatory subunit of cAMP-dependent protein kinase n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SHS2_HAHCH Length = 235 Score = 53.9 bits (128), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 42/172 (24%), Positives = 71/172 (41%), Gaps = 9/172 (5%) Query: 27 DYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDFFAAPCFIGEIELIDKDHEPRAVQ 86 +++ Q G +P+ ++ + +G R+ NG+ +++ F P + GEI L D+ + Sbjct: 44 EFLFQRGDKPAGIYAVVKGSLRVAGVNENGKEAILAFVEPPNWFGEIALFDRLDRTHSAL 103 Query: 87 AIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKNYRNIVSLTQNQSFPLVNRLAAFI 146 A L LP K LL F R V L K ++ P RLA + Sbjct: 104 AESPTTLLHLPQKGLETLLAAKPHFWRDFGVLLCFKLRLAFRAVEDATLLPAPLRLARRL 163 Query: 147 LLSQEG---------DLYHEKHTQAAEYLGVSYRHLLYVLAQFIHDGLLIKS 189 ++ EG + H + Q LGVS + + +L + GL+ S Sbjct: 164 VVMAEGYGDFSGQARRVIHIQQEQLGMMLGVSRQTVNQILKELEQKGLIATS 215 >UniRef50_C7PAL9 Transcriptional regulator, Crp/Fnr family n=2 Tax=Sphingobacteriales RepID=C7PAL9_CHIPD Length = 352 Score = 53.9 bits (128), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 25/101 (24%), Positives = 54/101 (53%), Gaps = 4/101 (3%) Query: 26 RDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDFFAAPCFIGEIELIDKDHEPRAV 85 + I QEG +P+ L+++ +GR + Y +G+ ++ ++A F+G + L++ + Sbjct: 164 KQLIYQEGNRPTSLYFIQKGRVKTYKVNNDGKELAVNLYSAGEFLGYVALLEGSNYHENA 223 Query: 86 QAIEECWCLALPMKHYRPLLLND----TLFLRKLCVTLSHK 122 +A+E C A+P + + L+ N+ F+R L ++ K Sbjct: 224 EALEACELTAIPREDFETLINNNREVAQQFIRLLAKNITEK 264 >UniRef50_Q2G6R8 Transcriptional regulator, Crp/Fnr family n=3 Tax=Sphingomonadaceae RepID=Q2G6R8_NOVAD Length = 229 Score = 53.5 bits (127), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 36/149 (24%), Positives = 70/149 (46%), Gaps = 3/149 (2%) Query: 2 SESAFKDCF---LTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRV 58 ++S F DC L+D+ ++ F ++ +G++ LF + G AR+ ANGR Sbjct: 12 AQSLFADCEQAELSDIIGRGQVRTFKPGQELMAQGEEGKTLFIVLSGLARVSMVAANGRE 71 Query: 59 SLIDFFAAPCFIGEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVT 118 ++D+ A +GEI +D +V+AIE L L + ++ +L Sbjct: 72 IILDYAEAGHVLGEIAFLDGGERTASVEAIEPVEALVLTRSAFAEIIDRHKGLSLRLLKA 131 Query: 119 LSHKNYRNIVSLTQNQSFPLVNRLAAFIL 147 ++ + +N + ++++ RLA F+L Sbjct: 132 MARRLRQNNAVIEADRAYTSGPRLARFLL 160 >UniRef50_B5YHX8 Transcriptional regulator, putative n=1 Tax=Thermodesulfovibrio yellowstonii DSM 11347 RepID=B5YHX8_THEYD Length = 222 Score = 53.5 bits (127), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 43/199 (21%), Positives = 87/199 (43%), Gaps = 16/199 (8%) Query: 19 RLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDFFAAPCFIGEIELIDK 78 +++ F R+ I EG P W L +G+ ++ NG+ +++ AP F G + L+ Sbjct: 24 KVYKFKKRETIFNEGDIPQWFHVLIKGKIKISKFSNNGKEIILELLDAPDFFGTLALLKN 83 Query: 79 DHEPRAVQAIEECWCLALPMKHY-----------RPLLLNDTLFLRKLCVTLSHKNYRNI 127 P + AI++C +P K + +L + T+ L+ +L + ++ Sbjct: 84 IPYPASAIAIDDCDIGNIPSKTFLQIVNKYPELQSEILHHVTMRLKSGIESLKNIALVDV 143 Query: 128 VSLTQNQSFPLVNRLAAFILLSQEGDLYHEKHT--QAAEYLGVSYRHLLYVLAQFIHDGL 185 +S Q L N+ + EG L K T + AE G + + ++++ +G Sbjct: 144 LSRIVYQILKLANKYGKKV---SEGILIDLKLTKQEIAEMSGTTTETAIRIMSKLKKEGY 200 Query: 186 LIKSKKGYLIKNRKQLSGL 204 + + + +IK+ + L L Sbjct: 201 ITEQNRKIIIKDIEMLLNL 219 >UniRef50_A7GXI3 Transcription regulator n=5 Tax=Campylobacter RepID=A7GXI3_CAMC5 Length = 214 Score = 53.1 bits (126), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 46/182 (25%), Positives = 85/182 (46%), Gaps = 8/182 (4%) Query: 27 DYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDFFAAPCFIGEIELIDKDHEPRAVQ 86 +++ EG++P WL +L G +LY T ANG+ + A F+ E+ + P + Sbjct: 34 EFLFMEGEEPKWLIFLLSGSVKLYKTAANGKEIFLHQLAPMNFVAEVVNFENIVYPASAV 93 Query: 87 AIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKNYRNIVSLTQNQSFPLVN--RLAA 144 L + + + L L++ L ++S K I S +Q L + ++A Sbjct: 94 FTISGEVLKINYEKFATLFLSNPKICMNLIKSMSEK--LRITSNLLHQELVLNSEAKVAK 151 Query: 145 FILLSQEGDLYHE-KHTQAAEYLGVSYRHLLYVLAQFIHDGLLIKSKKGYLI-KNRKQLS 202 FIL+ + DL++ KHT+ A L ++ +L +F L+ +K +I KN +L+ Sbjct: 152 FILMHE--DLFNSLKHTKIASILNITPETFSRILNKFKTANLIKLDEKNQIIDKNVDELT 209 Query: 203 GL 204 + Sbjct: 210 QI 211 >UniRef50_C3X8Q5 Transcriptional regulator n=1 Tax=Oxalobacter formigenes OXCC13 RepID=C3X8Q5_OXAFO Length = 215 Score = 53.1 bits (126), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 46/188 (24%), Positives = 82/188 (43%), Gaps = 11/188 (5%) Query: 19 RLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDFFAAPCFIGE-IELID 77 RL H+ R++I +G L G+ R +GR I+ AP + Sbjct: 32 RLAHYETREHIAMQGAPCRAFILLCEGQVRASMIGTDGRQITIEDHEAPMLLASNFVFAT 91 Query: 78 KDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKNY---RNIVSLTQNQ 134 +H P + AI C + + + + L+ + + L+ LS +++ R + SL Sbjct: 92 HNHFPVDIIAITPCEIMVIEKEPFMELMCTEPVVLQNFLRILSDRSHILSRKLGSLVL-- 149 Query: 135 SFPLVNRLAAFILLSQEGDLYHEKHTQAAEYLGVSYRHLLYVLAQFIHDGLLIKSKKGYL 194 L NR+AA++L QE + A+YLGV+ L VLA+ +G ++ + Sbjct: 150 -LKLKNRIAAYLLEHQEI----RNQQEVADYLGVARPSLARVLAELAQEGSVLFENRRVT 204 Query: 195 IKNRKQLS 202 I ++ +L Sbjct: 205 IADQAKLE 212 >UniRef50_A7I340 Transcription regulator n=1 Tax=Campylobacter hominis ATCC BAA-381 RepID=A7I340_CAMHC Length = 213 Score = 52.8 bits (125), Expect = 9e-06, Method: Compositional matrix adjust. Identities = 37/166 (22%), Positives = 73/166 (43%), Gaps = 9/166 (5%) Query: 33 GQQPSWLFYLTRGRARLYATLANGRVSLIDFFAAPCFIGEIELIDKDHEPRAVQAIEECW 92 G++ +L +L G ++Y T A + ++ APCF+ E+ + ++ P + + Sbjct: 39 GEKSKYLLFLLSGEVKIYKTAARAKEIVLHILKAPCFVAEVAIFEEMEFPASAVFTKSGE 98 Query: 93 CLALPMKHYRPLLLNDTLFLRK-LCVTLSHKNYRNIVSLTQNQSFPLV---NRLAAFILL 148 L + + ++ F ++ +C+ L + + ++ S L+ + A LL Sbjct: 99 ILKIDYEKFKA-----NFFCKQEICLELLRSVSKKVCAIEGFVSDSLILSAEQKTAQFLL 153 Query: 149 SQEGDLYHEKHTQAAEYLGVSYRHLLYVLAQFIHDGLLIKSKKGYL 194 + +K TQ A L +S L +LA F + +LI K G L Sbjct: 154 NNFDKFLKQKKTQTANDLNISQETLSRILANFKKEKILITDKNGKL 199 >UniRef50_D1TDT1 Putative transcriptional regulator, Crp/Fnr family n=1 Tax=Burkholderia sp. CCGE1002 RepID=D1TDT1_9BURK Length = 280 Score = 52.4 bits (124), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 39/130 (30%), Positives = 63/130 (48%), Gaps = 9/130 (6%) Query: 10 FLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDFFAAPCF 69 + + S R F R+++V +G S L L GR ++ A +GR +DF + Sbjct: 53 VIEETSRHIRYRRFSKREFVVHKGDAGSSLLMLMSGRLQVIALSEDGREVGLDFVEPGDY 112 Query: 70 IGEIELIDKDHEPRAVQAIEECWCLALPMKH------YRPLLLNDTLFLRKLCVTLSH-K 122 GE+ +ID ++ AI E LP KH YR + + L L++LC T+ Sbjct: 113 FGELSIIDGGPRSASIIAITESVVGFLP-KHQAQALFYRNPAVVEAL-LQRLCRTIRQAS 170 Query: 123 NYRNIVSLTQ 132 NYR+++ LT+ Sbjct: 171 NYRSMLGLTR 180 >UniRef50_C0CR54 Putative uncharacterized protein n=1 Tax=Blautia hydrogenotrophica DSM 10507 RepID=C0CR54_9FIRM Length = 221 Score = 52.0 bits (123), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 49/192 (25%), Positives = 86/192 (44%), Gaps = 13/192 (6%) Query: 25 ARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDFFAAPCFIGEIELIDKDHEPRA 84 A +YI + G+ LFY+ G R+ G+ L+D F G+I + K + Sbjct: 26 AGEYISRAGKADGGLFYVVSGYMRVECVSHEGKKILVDNLGPDNFTGKISRVQKAYFACD 85 Query: 85 VQAIEECWCLALPMKHYRPLLLN---DTLFLRKLCVTLSHKNYRNIVSLTQNQSFPLVNR 141 + A +C L L K Y ++ + LF RK+ + +V +SF + Sbjct: 86 IFAATDCDLLFLESKVYEAMMKDKGFSELFYRKISNRVYQMYKGRLV-----RSFYSLAE 140 Query: 142 LAAFILLSQEG--DLYHEKHTQA-AEYLGVSYRHLLYVLAQFIHDGLLIK--SKKGYLIK 196 L A+ + S+ G ++ + T + E L +S R L +L +F+ G L K Y ++ Sbjct: 141 LVAYHICSRTGKDQIFEYRSTLSLCEELDISRRGLYNILNKFLEKGYLEKEVGSSRYYVR 200 Query: 197 NRKQLSGLALEM 208 NR++L + E+ Sbjct: 201 NRRELEKICSEV 212 >UniRef50_A6LCQ3 cAMP-binding domain transcriptional regulator n=3 Tax=Bacteroidales RepID=A6LCQ3_PARD8 Length = 214 Score = 51.6 bits (122), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 44/188 (23%), Positives = 85/188 (45%), Gaps = 5/188 (2%) Query: 15 SADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDFFAAPCFIGEIE 74 S D F D++ ++G S L+ L++GR + +G + ++ +AP + Sbjct: 23 SLDYSTRSFKKGDWVARQGDALSSLYLLSKGRVKTEMITESGTILEVETLSAPTPLASAF 82 Query: 75 LIDKDHE-PRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKNYRNIVSLTQN 133 L +++ P V A+EEC + +P LL + FL+ +++ L Sbjct: 83 LFAENNRFPVDVIALEECEIILIPKSAVMRLLATNEHFLQSYMAFNANRTQFLSERLQLL 142 Query: 134 QSFPLVNRLAAFILLSQEGDLYHE--KHTQAAEYLGVSYRHLLYVLAQFIHDGLLIKSKK 191 + +LA +IL +GD Y + T+ +EY GV+ L ++ I +G + S++ Sbjct: 143 SIKTIKGKLAYYILKRIQGDHYKQDRNQTELSEYFGVARPSLARSFSEMIEEGAI--SRE 200 Query: 192 GYLIKNRK 199 G ++ K Sbjct: 201 GKIVDMNK 208 >UniRef50_UPI0001B9EE88 putative transcriptional regulator, Crp/Fnr family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001B9EE88 Length = 232 Score = 51.6 bits (122), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 42/168 (25%), Positives = 76/168 (45%), Gaps = 8/168 (4%) Query: 27 DYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDFFAAPCFIGEIELIDKDHEPRAVQ 86 + I+ EG L +L +G+ ++ +++ G+ L+ F IG+IELI ++ Sbjct: 40 EIILHEGFAMQSLLFLVQGKIKVTSSIETGKSLLLRFGHPFSIIGDIELIRDVPVQSQIE 99 Query: 87 AIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKNYRNIVSLTQNQSFPLVNRLAAFI 146 A+ EC + L + R + + F L LS+K + N + NR A+++ Sbjct: 100 AVNECLFIGLSFDYIRLHEMTNARFTSTLLDHLSYKLQTCTTASRVNLLASVENRFASYL 159 Query: 147 L--LSQEGD------LYHEKHTQAAEYLGVSYRHLLYVLAQFIHDGLL 186 + +S D L + + A LG ++RHL V+ F G+L Sbjct: 160 MSTMSPGSDPSFGMELKTDHIGEIASLLGTTHRHLNRVMFAFAQKGIL 207 >UniRef50_Q30Y06 Transcriptional regulator, Crp/Fnr family n=6 Tax=Desulfovibrionales RepID=Q30Y06_DESDG Length = 248 Score = 51.2 bits (121), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 48/186 (25%), Positives = 85/186 (45%), Gaps = 12/186 (6%) Query: 29 IVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDFFAAPCFIGEIELIDKDHEPRAVQAI 88 I EG + L+ + GR +++ T +GR +++ F A GE+ + D P A+ Sbjct: 60 IFVEGTRAEGLYIVLDGRVKIFKTAPDGREAVMHVFGAGEPFGEVAVFQNDVFPANAMAV 119 Query: 89 EECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHK---NYRNIVSLTQNQSFPLVNRLAAF 145 E+ L LP + + D + LS K R + +LT + + RLAA+ Sbjct: 120 EQSRVLFLPRRGIVDRIAQDPSLAMNMLAALSRKLRMFTRQVEALTLKE---IPQRLAAY 176 Query: 146 IL-LS-QEG--DLYHEKHTQA--AEYLGVSYRHLLYVLAQFIHDGLLIKSKKGYLIKNRK 199 +L LS ++G D+ +++ A LG + L LA+ + G + + I +R+ Sbjct: 177 LLHLSVKKGHKDVIRLDVSKSLLAGVLGTARETLSRALAKLVETGAITMEGRTITITDRE 236 Query: 200 QLSGLA 205 L+ LA Sbjct: 237 YLTALA 242 >UniRef50_A5CYQ7 Putative uncharacterized protein n=1 Tax=Pelotomaculum thermopropionicum SI RepID=A5CYQ7_PELTS Length = 439 Score = 50.4 bits (119), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 34/119 (28%), Positives = 54/119 (45%), Gaps = 2/119 (1%) Query: 6 FKDCF--LTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDF 63 FKD L ++ +L F I +EG + S L+ ++ G+ +Y LA GR I+ Sbjct: 17 FKDIGYPLHGLAGKMQLSRFDKGSVIYKEGDEGSCLYLVSAGKVLVYTVLAGGREMPIET 76 Query: 64 FAAPCFIGEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHK 122 P F GE+ L+D P +A+E+ C L + + L + K+ LS K Sbjct: 77 IEQPGFFGEMSLLDGGRRPAWARALEDTVCFCLYRQDFLDFLKENLQVSLKIIENLSRK 135 >UniRef50_D2QLW5 Transcriptional regulator, Crp/Fnr family n=1 Tax=Spirosoma linguale DSM 74 RepID=D2QLW5_9SPHI Length = 350 Score = 50.4 bits (119), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 44/193 (22%), Positives = 84/193 (43%), Gaps = 8/193 (4%) Query: 16 ADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDFFAAPCFIGEIEL 75 AD +L + ++ +G +P+ L++L GR ++ T +G+ + D F FIG L Sbjct: 154 ADRKLHRVPKKQFVYSDGDEPTRLYFLKNGRVKIVRTSHDGKELVTDLFGPNSFIGYRAL 213 Query: 76 IDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLS-HKNYRNIVSLTQNQ 134 ++ + + +++ + +P + +L R+ L+ H N + L+ Sbjct: 214 LENTNYTDSAVTLDDSELIYIPKNEFLHILGTQPEAGRQFVHLLAGHVNGKEEQLLSMAY 273 Query: 135 SFPLVNRLAAFIL---LSQEGDLYHE---KHTQAAEYLGVSYRHLLYVLAQFIHDGLLIK 188 S L R+A +L S +G+ A +G + L+ +L +F HDGL+ Sbjct: 274 S-SLRRRVADTLLRLGTSPDGEPVPPIQLSRDDLAAVIGTATESLIRILTEFKHDGLIEM 332 Query: 189 SKKGYLIKNRKQL 201 S G I +L Sbjct: 333 SSAGIRIVEPDKL 345 >UniRef50_B8K4D0 Putative cAMP-binding protein n=1 Tax=Vibrio parahaemolyticus 16 RepID=B8K4D0_VIBPA Length = 221 Score = 50.1 bits (118), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 41/170 (24%), Positives = 80/170 (47%), Gaps = 12/170 (7%) Query: 27 DYIVQEGQQPSWLFYLTRGRARLYATLANGR-VSLIDFFAAPCFIGEIELIDKDHEPRAV 85 D+I+++ Q S +++ + + T NG+ +SL D+ A F GE+E P +V Sbjct: 32 DFIIKQHTQVSEVYWADNAQFSVLHTAENGKTLSLGDYHLADNFFGEMEFFSDGPSPFSV 91 Query: 86 QAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKN---YRNIVSLTQNQS-FPLVNR 141 A + +A+PM + LLL D + ++H+ Y N +S+ +S +PL Sbjct: 92 VATSDVELIAIPMDKFAELLLQDG----HIAFWMNHRMSNIYLNTMSIAIERSLYPLKYN 147 Query: 142 LAAFILLSQEGDLYHEKHT---QAAEYLGVSYRHLLYVLAQFIHDGLLIK 188 + ++ + + H+ Q A+ G + R ++ + I +GL+ K Sbjct: 148 IIKDLVDRHTCNEKSQGHSYMYQEAQRFGCTERAYTRIIRELIDEGLVAK 197 >UniRef50_C6XD76 Transcriptional regulator, Crp/Fnr family n=1 Tax=Methylovorus sp. SIP3-4 RepID=C6XD76_METSD Length = 227 Score = 50.1 bits (118), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 41/194 (21%), Positives = 84/194 (43%), Gaps = 11/194 (5%) Query: 19 RLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDFFAAPCFIGEIELIDK 78 R+F + ++ +G + + LF+L GR + GR + ++F A + GE+ ++D Sbjct: 28 RMFRIEKKHFVCHKGDEANELFFLLSGRLMVVDISLEGRQTGLNFIAPGDYFGELSVLDD 87 Query: 79 DHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHK-----NYRNIVSLTQN 133 P ++ A+ E ALP L+ + ++ + H+ + R ++ + Sbjct: 88 LPRPASIVAVSESLIAALPKSKVNSLVNHVPKVAERMLKDMCHRMRMVTDLRCLLGVPNA 147 Query: 134 QS--FPLVNRLAAFILLSQEGDLYHEKHTQAAEYLGVSYRHLLYVLAQFIHDGLLIKSKK 191 S F L++R+A +Q + H Q A + S + L + +G++ K Sbjct: 148 YSRVFLLISRMAK----NQPYVDHFPSHQQVAIMVNTSRETVSRALGLLVTEGVIEKEGM 203 Query: 192 GYLIKNRKQLSGLA 205 ++KN L +A Sbjct: 204 RLIVKNPAALHQMA 217 >UniRef50_C4KA14 Transcriptional regulator, Crp/Fnr family n=1 Tax=Thauera sp. MZ1T RepID=C4KA14_THASP Length = 222 Score = 49.7 bits (117), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 41/184 (22%), Positives = 77/184 (41%), Gaps = 9/184 (4%) Query: 29 IVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDFFAAPCFIGEIELIDKDHEPRAVQAI 88 + + G PS LF++ G RL + G+ +++ F GEI + + QA+ Sbjct: 30 VFERGSHPSGLFFVCNGAVRLMVSGPEGKDKVVELFEPGGMFGEIGVFTGERYRTWTQAV 89 Query: 89 EECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKNYRNIVSLTQNQSFPLVNRLAAFILL 148 + +P + + D ++ V + + R I ++ P R+A+++L Sbjct: 90 GAVVLVHVPRERVLAAVAMDNSLSNRMLVAVCARIQRLIDAIGSTVGGPAAVRVASYLLE 149 Query: 149 SQEGD--------LYHEKHTQAAEYLGVSYRHLLYVLAQFIHDGLLIKSKKGYLIKNRKQ 200 E L K T A+ L ++ L VL + +G+L S + ++NR Q Sbjct: 150 QLERGARSDGCIVLAAPKKTIAS-LLNLTPETLSRVLRSLVEEGVLTVSGRRIRVRNRAQ 208 Query: 201 LSGL 204 L+ L Sbjct: 209 LARL 212 >UniRef50_Q7N3E6 Similar to transcription regulator n=2 Tax=Photorhabdus RepID=Q7N3E6_PHOLL Length = 220 Score = 49.7 bits (117), Expect = 8e-05, Method: Compositional matrix adjust. Identities = 48/171 (28%), Positives = 79/171 (46%), Gaps = 10/171 (5%) Query: 28 YIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDFFAAPCF-IGEIELI--DKDHEPRA 84 Y+ + + L+ L G+ ++ NG+ S+ FA P F IG++EL D+ Sbjct: 32 YLTHQSSIFTHLYILVEGKLKVEFYNVNGKFSVFA-FATPLFLIGDLELFHAQGDNIINT 90 Query: 85 VQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKNYRNIVSLTQNQSFPLV-NRLA 143 V A E L++P++ R L D FL+ +C LS+K + + SL + F V ++L Sbjct: 91 VFAQERSVLLSIPLETVRIFGLTDVGFLQFVCKQLSNKLFES--SLFRTGIFLTVEDKLK 148 Query: 144 AFILLSQEGD---LYHEKHTQAAEYLGVSYRHLLYVLAQFIHDGLLIKSKK 191 F+ + + L EK A LGVS R L + G+++ K Sbjct: 149 RFLYYHSKRNGTVLVLEKREDLASVLGVSVRQLNRAIKSLNEKGIIVSKNK 199 >UniRef50_C9KQT9 Transcriptional regulator, Crp/Fnr family n=1 Tax=Mitsuokella multacida DSM 20544 RepID=C9KQT9_9FIRM Length = 217 Score = 48.9 bits (115), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 42/193 (21%), Positives = 86/193 (44%), Gaps = 8/193 (4%) Query: 23 FLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDFFAAPCFIGEIE-LIDKDHE 81 F +++V++G++ ++ LT+G R+ A+G+ P IG++E L +++ Sbjct: 23 FRPGEFVVRKGERADHVYILTKGTTRVSNEFASGQRYTFAHQTVPDLIGDLEVLAGQEYF 82 Query: 82 PRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKNYRNIVSLTQNQSFPLVNR 141 +A+ EC +A+ ++ + D F + L+ K Y Q + P + R Sbjct: 83 SATNEAVTECEVIAMTADTFKKWMRRDNHFACAIAQLLASKMYPTSNENGQIKFQPSIQR 142 Query: 142 LAAFI-----LLSQEGDLYHEKHTQAAEYLGVSYRHLLYVLAQFIHDGL--LIKSKKGYL 194 L ++ L E + H Q A+ +G S + + +++ GL L+ K Sbjct: 143 LQEYLVKRLDLAPSEQFVLHTSRQQIADDIGTSVKTVNRGVSKLRDAGLITLLHGKIAIS 202 Query: 195 IKNRKQLSGLALE 207 + +++L L LE Sbjct: 203 VAQQEKLRTLKLE 215 >UniRef50_B2V833 Transcriptional regulator, Crp/Fnr family n=2 Tax=Aquificales RepID=B2V833_SULSY Length = 223 Score = 48.1 bits (113), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 44/179 (24%), Positives = 80/179 (44%), Gaps = 11/179 (6%) Query: 32 EGQQPSWLFYLTRGRARLYATLANGRVSLIDFFAAPCFIGEIELIDKDHEPRAVQAIEEC 91 EG++ L+ L G+ ++Y T G I+ F IGE+ +K P + I E Sbjct: 41 EGEKAENLYILLEGKLKVYKTTFKGIEVFINQFGPVTLIGEMANFEKVPYPATAEFITEG 100 Query: 92 WCLALPMKHYRPLLLNDTLFLRKLCVTLSHKNYRNIVSLTQNQSFPLV----NRLAAFIL 147 L + + + L + L + +LS+K I L + +V R+A IL Sbjct: 101 KVLIINFRTFEEEFLKNPEILVSIIKSLSNK----IRMLNKFIDSTVVLSADARVAKLIL 156 Query: 148 LSQEGDLYHE-KHTQAAEYLGVSYRHLLYVLAQFIHDGLLIKSKKGYLIKNRKQLSGLA 205 S E ++ KH Q A +L ++ L V+++ G++ + +IK+R +L ++ Sbjct: 157 ESPE--IFEVLKHNQIASFLNITPETLSRVISRLKQKGIIFIDGRKIIIKDRDKLKKIS 213 >UniRef50_C0GFA6 Transcriptional regulator, Crp/Fnr family n=1 Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GFA6_9FIRM Length = 229 Score = 48.1 bits (113), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 41/181 (22%), Positives = 78/181 (43%), Gaps = 12/181 (6%) Query: 32 EGQQPSWLFYLTRGRARLYATLANGRVSLIDFFAAPCFIGEIELIDKDHEPRAVQAIEEC 91 EG+Q LF + +GR ++ + A+GR ++ E+ L D+ P +A+E+ Sbjct: 46 EGEQGEALFVIRQGRVKISKSTADGREQILHMLKDGDIFAEVVLFDRGPYPATAEAVEDT 105 Query: 92 WCLALPMKHYRPLLLNDTLFLRKLCVTLSHKNYRNIVSLTQNQSF-PLVNRLAAFIL--L 148 C L L+ + L KL +S K R L ++ + R+A +L Sbjct: 106 QCWLLRSADMEKLMQSHPLLAIKLLRVMS-KRLRQAQLLVRDLALHDAYGRMAGLLLRFA 164 Query: 149 SQEGDLYHE--------KHTQAAEYLGVSYRHLLYVLAQFIHDGLLIKSKKGYLIKNRKQ 200 +EG + + A +G S + +L++F DG+L K+ ++ + ++ Sbjct: 165 RREGKQTKDGIVLELDLTRQEMASMIGTSRETVARILSRFQKDGVLTLDKQRIVLLDEEK 224 Query: 201 L 201 L Sbjct: 225 L 225 >UniRef50_Q4ZZV6 Cyclic nucleotide-binding n=5 Tax=Pseudomonas syringae group RepID=Q4ZZV6_PSEU2 Length = 236 Score = 48.1 bits (113), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 45/174 (25%), Positives = 80/174 (45%), Gaps = 9/174 (5%) Query: 29 IVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDFFAAPCFIGEIELIDKDHEPRAVQAI 88 + ++G P ++ L G R+ A ++ ++ +APC+ GE+ L D V ++ Sbjct: 43 LFEKGDLPCGVYVLLEGSVRIGAAHEQRLLTNVEPASAPCWFGEVSLFDGLPRRFEVCSL 102 Query: 89 EECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKNYRNIVSLTQNQSFPLVNRLAAFILL 148 E+ L +P LL + + R LS K + S + + P R+A +L+ Sbjct: 103 EQSIFLHIPQPFLARLLDRHSEYWRWFAALLSQKVGLPLQSPEKMRQLPPRARVAWRLLM 162 Query: 149 SQE--GDLYHEKH------TQAAEYLGVSYRHLLYVLAQFIHDGLLIKSKKGYL 194 E G L H + QAAE L ++ LL VL Q +H+ +++ +G+L Sbjct: 163 LSEGYGPLSHARRLIALDDIQAAERLALASPALLEVL-QDLHERRIVRLGEGHL 215 >UniRef50_C3XLC9 Putative uncharacterized protein n=4 Tax=Helicobacter RepID=C3XLC9_9HELI Length = 202 Score = 47.8 bits (112), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 42/179 (23%), Positives = 80/179 (44%), Gaps = 9/179 (5%) Query: 23 FLARDYIVQ-EGQQPSWLFYLTRGRARLYATLAN-----GRVSLIDFFAAPCFIGEIELI 76 F +D I+ EG+ P LF L G+ R+Y ++ R + + +P F+ E+ + Sbjct: 25 FFNKDEILFFEGENPKKLFILLNGKVRIYKSIQPIKDIAPREKTLHYITSPSFLAEMPSL 84 Query: 77 DKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKNYRNIVSLTQNQSF 136 K P + E+C L + ++ ++ + F ++L +L K R + +L Sbjct: 85 LKQPFPASAICTEDCEVLEISLEAFQKQCTENPHFCQQLIASLCQK-IRILETLIMESHL 143 Query: 137 PLVNRLAAFILLSQEGDLYHEKHTQAAEYLGVSYRHLLYVLAQFIHDGLLIKSKKGYLI 195 L ++L +F L +L + A++L S L + + G I++KKG +I Sbjct: 144 SLKDKLMSF-LQENTQNLNTLTQREIAKHLNTSPESLSRTIRELKTQG-RIETKKGKII 200 >UniRef50_B2UJ25 Transcriptional regulator, Crp/Fnr family n=10 Tax=Burkholderiaceae RepID=B2UJ25_RALPJ Length = 243 Score = 47.4 bits (111), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 48/185 (25%), Positives = 77/185 (41%), Gaps = 12/185 (6%) Query: 11 LTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDFFAAPCFI 70 L D++A RL A + + Q G P L+ + G R+ AT A+GR +L+ + Sbjct: 37 LIDIAAVRRLG---AGEILFQRGDAPDGLYCVVEGTIRIGATSADGREALLAVLEPVNWF 93 Query: 71 GEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKNYRNIVSL 130 GEI + D+ +A L +P LL L + L+HK + L Sbjct: 94 GEIGVFDRQPRTHDARADGHTTLLHMPQAALIALLDGSPALLHAFALLLTHKLRLTFIVL 153 Query: 131 TQNQSFPLVNRLAAFILLSQEG---------DLYHEKHTQAAEYLGVSYRHLLYVLAQFI 181 + P R+A +LL +G + H Q A+ L +S + + VL +F Sbjct: 154 EETALLPAPVRVARRLLLMADGYGDLRLGTRRVLHVPQEQLAQLLSLSRQTVNQVLKEFE 213 Query: 182 HDGLL 186 G+L Sbjct: 214 AHGIL 218 >UniRef50_B8D2C4 Putative transcriptional regulator, Crp/Fnr family n=1 Tax=Halothermothrix orenii H 168 RepID=B8D2C4_HALOH Length = 231 Score = 47.0 bits (110), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 44/178 (24%), Positives = 74/178 (41%), Gaps = 20/178 (11%) Query: 39 LFYLTRGRARLYATLANGRVSLIDFFAAPCFIGEIELIDKDHEPRAVQAIEECWCLALPM 98 L+ L GR +L A G+ ++ GE+ L D+D P + I++ + LP+ Sbjct: 51 LYVLVSGRVKLSMLSAEGKEKVLTILQEGDIFGEVSLFDQDPLPVTAEVIKDSRLIVLPV 110 Query: 99 KHYRPLLLNDTLFLRKLCVTLSHKNYRNIVSLTQNQSFPLV-----NRLAAFILL----- 148 K +++ + K+ L+ K L Q LV RLA+ +L Sbjct: 111 KDLENIIMKNPKVAIKIIEALAKKT-----RLLTGQIRDLVFYDAEGRLASLLLRFAKDF 165 Query: 149 ---SQEGDLYH--EKHTQAAEYLGVSYRHLLYVLAQFIHDGLLIKSKKGYLIKNRKQL 201 + G L H + A LG S + +L QFI +G++ K+ +I +QL Sbjct: 166 GIDVKSGTLIDLVLTHQEIANLLGSSRVTVTKLLNQFIDEGIIKTYKRKIVIMKPEQL 223 >UniRef50_D1PKF6 Putative cyclic nucleotide-binding domain protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PKF6_9FIRM Length = 214 Score = 47.0 bits (110), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 42/176 (23%), Positives = 69/176 (39%), Gaps = 21/176 (11%) Query: 27 DYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDFFAAPCFIGEIELIDKDHEPRAVQ 86 + I Q+ + ++ G R++ +G S ++ P +G+IE + P Q Sbjct: 39 EIITAPDQKLDTILFVIEGTVRIFGIRPDGTTSPVNQQTPPVILGDIEFSQQGTRPFFTQ 98 Query: 87 AIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKNYRNIVSLTQNQSFPLVNRLAAFI 146 A + C+ LP+K Y L D FL L + + K Q F V+ A Sbjct: 99 ATTDVLCIGLPVKPYEKELHRDLRFLHALLHSYAEK----------LQFFAFVDAPAE-- 146 Query: 147 LLSQEGDLYHEKHTQAAEYLGV---------SYRHLLYVLAQFIHDGLLIKSKKGY 193 L + LY + E+ G+ S R L VL + +G + K KG+ Sbjct: 147 TLEERVLLYLKNFCPNHEFTGIEMAVSRLRCSRRQLQRVLQKLCTNGTIQKVGKGH 202 >UniRef50_B6BLA3 Transcription regulator n=1 Tax=Campylobacterales bacterium GD 1 RepID=B6BLA3_9PROT Length = 210 Score = 46.6 bits (109), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 45/174 (25%), Positives = 79/174 (45%), Gaps = 7/174 (4%) Query: 22 HFLARDYIV-QEGQQPSWLFYLTRGRARLYATLANGRVSLIDFFAAPCFIGEIELIDKDH 80 H +++D IV EG +L+ L G +LY T +N + ++ +F IGE+ ++ Sbjct: 29 HTISKDNIVFYEGDDSKYLYLLVHGIIKLYKTSSNHKEIVLKYFHENELIGEVANFEQIP 88 Query: 81 EPRAVQAIEECWCLALPMKHYRPLLLNDT--LFLRKLCVTLSHKNYRNIVSLTQNQSFPL 138 P +A + L + + ++ ++ F+ + + KN I+S N Sbjct: 89 YPATAKAYTDVEILKIDFSSLKEIIYSNPELSFIIQTSLIKKIKNLEVIIS--TNLVLDS 146 Query: 139 VNRLAAFILLSQEGDLYHEKHTQAAEYLGVSYRHLLYVLAQFI-HDGLLIKSKK 191 R+A +I + D + K+ AE L VS L +L F HD + IKSK+ Sbjct: 147 KERVAKYI-YNHTDDFFTTKNIIIAEILSVSPETLSRILKFFKDHDIIDIKSKR 199 >UniRef50_A3WI44 Transcriptional regulator, Crp/Fnr family protein n=1 Tax=Erythrobacter sp. NAP1 RepID=A3WI44_9SPHN Length = 232 Score = 46.6 bits (109), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 35/186 (18%), Positives = 88/186 (47%), Gaps = 7/186 (3%) Query: 27 DYIVQEG-QQPSWLFYLTRGRARLYATLANGRVSLIDFFAAPCFIGEIELIDKDHEPRAV 85 D ++ +G + + Y+ G ++ A+GR ++ + + IGEI L+D + Sbjct: 41 DVVINQGDENGDYAVYVLSGGLKISFVSASGREIILSYCSPGEVIGEIALLDSEPRTATA 100 Query: 86 QAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKNYRNIVSLTQNQSFPLVNRLA-A 144 A+ E L LP K + + ++ + ++ L+ + + + + +++F + RLA A Sbjct: 101 TAVVESSVLLLPSKQFLEAVSSNPTSVARIMRELAQRVRQQNLIIESDRTFSMGPRLARA 160 Query: 145 FILL-----SQEGDLYHEKHTQAAEYLGVSYRHLLYVLAQFIHDGLLIKSKKGYLIKNRK 199 + L + G LY+ + + G++ ++ +L+++ G++ + + +++ + Sbjct: 161 LVRLIDKDRNDGGLLYNPSQSDLGAFAGLARENVSRLLSEWESQGIIARDGRTLSVRDIE 220 Query: 200 QLSGLA 205 L LA Sbjct: 221 YLRSLA 226 >UniRef50_B8GAV8 Transcriptional regulator, Crp/Fnr family n=3 Tax=Chloroflexus RepID=B8GAV8_CHLAD Length = 224 Score = 46.2 bits (108), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 49/188 (26%), Positives = 78/188 (41%), Gaps = 15/188 (7%) Query: 28 YIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDFFAAPCFIGEIELIDKDHEPRAVQA 87 IV G+ P ++ + GR +L NGR +++ A + + D P VQA Sbjct: 40 VIVLAGEPPQAMYTIVAGRVKLVRIALNGREQIVNVMGAGQHFNTVPIFDHGPCPVNVQA 99 Query: 88 IEECWCLALPMKHYRPLLLNDTL----FLRKLCVTLSHKNYRNIVSLTQNQSFPLV-NRL 142 I + L LP+ R L++ L LR+ L H +V+L N + V RL Sbjct: 100 ITDVDLLVLPIDDMRRLVVEHPLLAMALLREFAGRLCH-----MVNLIDNIALHSVQGRL 154 Query: 143 AAFIL---LSQEGDLYHEKHTQA--AEYLGVSYRHLLYVLAQFIHDGLLIKSKKGYLIKN 197 A +L ++ E + TQA A + + L QF GL+ + I + Sbjct: 155 AQLLLNRAIASEQGEFVAPLTQAEMAAMIDTVREMVSRTLHQFEAQGLIRIERGAIAICD 214 Query: 198 RKQLSGLA 205 R+ L+ A Sbjct: 215 REGLAACA 222 >UniRef50_A7NFZ8 Transcriptional regulator, Crp/Fnr family n=6 Tax=Chloroflexi (class) RepID=A7NFZ8_ROSCS Length = 218 Score = 46.2 bits (108), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 46/200 (23%), Positives = 82/200 (41%), Gaps = 17/200 (8%) Query: 4 SAFKDCFLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDF 63 +A D L D + + +YI EG++P+ ++++ RGR RL T +GR ++ Sbjct: 14 AALDDRALADAARLMESRTYRPGEYIAYEGERPAGVYFVQRGRVRLSRTAPDGREQVLAM 73 Query: 64 FAAPCFIGEIELIDKDHEPRAVQAIEECWCLALP-------MKHYRPLLLNDTLFLRKLC 116 A + + D +A+ CL LP ++ + L L LR++ Sbjct: 74 VGAGENFNAVAIFDSHGNLTTARAMSLVQCLILPGDALITLIRRHPDLALA---MLREMA 130 Query: 117 VTLSHKNYRNIVSLTQNQSFPLV-NRLAAFILLSQEGDLYHEKHTQAAEYLGVSYRHLLY 175 L RN+ L ++ +F V RLA +L H + AE Sbjct: 131 GQL-----RNLAVLVEDLAFRSVRERLARELLREAREGAAELTHQELAERTATVREIAGR 185 Query: 176 VLAQFIHDGLLIKSKKGYLI 195 L Q +G L++ ++G ++ Sbjct: 186 ALRQLAQEG-LVRLERGRVV 204 >UniRef50_Q7NVL2 Putative uncharacterized protein n=1 Tax=Chromobacterium violaceum RepID=Q7NVL2_CHRVO Length = 510 Score = 45.8 bits (107), Expect = 0.001, Method: Compositional matrix adjust. Identities = 26/119 (21%), Positives = 51/119 (42%) Query: 4 SAFKDCFLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDF 63 SA D + ++ + F+ D I+ +G WL+ + G ++ TL +G L+D Sbjct: 354 SALNDEEMVVLADQLKFTPFVTGDIIMHQGSVAHWLYIMLSGEVEVWLTLPDGGRKLVDV 413 Query: 64 FAAPCFIGEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHK 122 + F GE+ L+ + V A CL L ++ +L++ + L+ + Sbjct: 414 LKSGSFFGEMGLMTGESRSNTVIARSNVECLRLDKDAFQTILVSRKELAETISTILAQR 472 >UniRef50_B3RC77 Putative cyclic nucleotide-binding regulatory protein n=1 Tax=Cupriavidus taiwanensis RepID=B3RC77_CUPTR Length = 239 Score = 45.8 bits (107), Expect = 0.001, Method: Compositional matrix adjust. Identities = 37/133 (27%), Positives = 64/133 (48%), Gaps = 11/133 (8%) Query: 8 DCFLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDFFAAP 67 D L ++ A+ R+ F R+++V G L L GR ++ A +GR +DF Sbjct: 18 DETLLELQAEIRIQRFRKREFVVHHGAAGDSLMMLLSGRLQVIALAEDGREVGLDFVEPG 77 Query: 68 CFIGEIELIDKDHEPRAVQAIEECWCLA--LPMKHYRPLLLN-----DTLFLRKLCVTLS 120 + GE+ +I D PR+ + L LP + + L N +TL L+KLC T+ Sbjct: 78 DYFGELSII--DGLPRSASIVASVDSLVGFLPRQKAKWLFYNHPSVIETL-LQKLCNTIR 134 Query: 121 H-KNYRNIVSLTQ 132 +YR+++ + + Sbjct: 135 QASSYRSMLGMNR 147 >UniRef50_C3AP08 Transcriptional regulator, Crp/Fnr n=3 Tax=Bacillus RepID=C3AP08_BACMY Length = 241 Score = 45.1 bits (105), Expect = 0.002, Method: Compositional matrix adjust. Identities = 42/183 (22%), Positives = 83/183 (45%), Gaps = 14/183 (7%) Query: 25 ARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDFFAAPCFIGEIELIDKDHEPRA 84 ++ ++ EG+ L+ GR ++ ++ G+ L+ F +A +G+IELI + Sbjct: 49 VKEIVLHEGEAIDGLYIQISGRTKITTSVITGKALLLRFCSAVSIMGDIELIQNVNIQSH 108 Query: 85 VQAIEECWCLALPMKHY-RPLLLNDTLFLRKLCVTLSHKNYRNIVSLTQNQSFPLVN--- 140 V A EE KHY +LL+D F ++L L H Y+ T ++ L + Sbjct: 109 VSA-EEKTDFIFINKHYVNNVLLHDIAFSQEL---LHHVTYKLQTCTTASRINLLASVET 164 Query: 141 RLAAFILLSQEG------DLYHEKHTQAAEYLGVSYRHLLYVLAQFIHDGLLIKSKKGYL 194 R A+++ + ++ H + A +G + RHL ++ + ++ K K + Sbjct: 165 RFASYLCTIRNTSKLFGREIRTTDHHEIASLIGTTTRHLNRIIEKLSITNVIRKENKQII 224 Query: 195 IKN 197 +K+ Sbjct: 225 VKD 227 >UniRef50_C2CK26 Transcriptional regulator n=1 Tax=Anaerococcus tetradius ATCC 35098 RepID=C2CK26_9FIRM Length = 215 Score = 45.1 bits (105), Expect = 0.002, Method: Compositional matrix adjust. Identities = 49/200 (24%), Positives = 82/200 (41%), Gaps = 20/200 (10%) Query: 16 ADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDFFAAPCFIGEIEL 75 AD L + +I +G+ L+ L GR ++Y G+ +I F P GE+ Sbjct: 24 ADLNLITYPKDSHIFTKGEIKDDLYCLIAGRIKVYKIDPEGKRYIIASFDKPAIFGEVYA 83 Query: 76 IDKDHEPRAVQAIEECWCLALPMKHYRPLL---------LNDTLFLRKLCVTLSHKNYRN 126 + EP A + L +K +R L+ +N L + + LS KN Sbjct: 84 YLR--EPFDFWAQADVDSKVLVIKDFRKLINTSKSTNFRINFIEILARKSLKLSKKN--- 138 Query: 127 IVSLTQNQSFPLVNRLAAFILLSQEGDLYH--EKHTQAAEYLGVSYRHLLYVLAQFIHDG 184 N L ++AAF+L +++ DL + A+YL + L L++ G Sbjct: 139 ----QMNSQANLKQKIAAFLLDNEKDDLVKLTISREEWADYLATTRPSLSRSLSEMAKKG 194 Query: 185 LLIKSKKGYLIKNRKQLSGL 204 L+ K I++RK L + Sbjct: 195 LIRIEDKLIRIEDRKSLEAM 214 >UniRef50_C2XKA0 Transcriptional regulator n=2 Tax=Bacillaceae RepID=C2XKA0_BACCE Length = 182 Score = 45.1 bits (105), Expect = 0.002, Method: Compositional matrix adjust. Identities = 35/148 (23%), Positives = 67/148 (45%) Query: 10 FLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDFFAAPCF 69 F D+ + + F ++I++ G + L++L GR + G+ L+ + P Sbjct: 14 FTKDLISFLSVSTFQPNEFILKAGDKIDGLYFLLSGRYIVSNLEVTGKELLLRYCQQPAI 73 Query: 70 IGEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKNYRNIVS 129 +G+IE+ A+E C L +P++ Y L D+ F + L L++K +S Sbjct: 74 MGDIEIFTDCLVESNCIAVEPCEVLFIPLEVYEAHLKFDSKFNQLLLKELAYKLRTCTIS 133 Query: 130 LTQNQSFPLVNRLAAFILLSQEGDLYHE 157 N P+ RLAA++ + L ++ Sbjct: 134 SRVNALSPVSIRLAAYLCTVESPSLLNQ 161 >UniRef50_Q73QG5 Cyclic nucleotide binding domain protein n=2 Tax=Treponema RepID=Q73QG5_TREDE Length = 216 Score = 44.7 bits (104), Expect = 0.002, Method: Compositional matrix adjust. Identities = 51/186 (27%), Positives = 80/186 (43%), Gaps = 9/186 (4%) Query: 28 YIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDFFAAP--CFIGEIELIDKDHEPRAV 85 +I EG P++ F L G ++ A+G+ +++ F P F L+D + Sbjct: 32 FIFFEGDTPAFFFVLKSGIVQIEKNTADGKRLIVNRFENPGTVFAEVYALLDSAIYDYSC 91 Query: 86 QAIEECWCLALPMKH-YRPLLLNDTLF--LRKLCVTLSHKNYRNIVSLTQNQSFPLVNRL 142 + I + L LP++ + ++T F L+ L L+HK Y L SF L ++ Sbjct: 92 RVISDAEILCLPIEGVFGAGAYSETHFKVLKNLLNILAHKAYFLNQKLLIFSSFSLRQKI 151 Query: 143 AAFILLSQEGDLYHE---KHTQAAEYLGVSYRHLLYVLAQFIHDGLLIKSKKGYLIKNRK 199 A ++L EG E AEYL V L L DGLL K +K +I N Sbjct: 152 ALYLLQQAEGSSKVELNLNREAMAEYLAVPRPSLSRELMSMQKDGLL-KIEKDTIIVNLD 210 Query: 200 QLSGLA 205 +L + Sbjct: 211 KLEDFS 216 >UniRef50_C4K986 Transcriptional regulator, Crp/Fnr family n=1 Tax=Thauera sp. MZ1T RepID=C4K986_THASP Length = 233 Score = 44.7 bits (104), Expect = 0.002, Method: Compositional matrix adjust. Identities = 52/208 (25%), Positives = 90/208 (43%), Gaps = 15/208 (7%) Query: 9 CFLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDFFAAPC 68 C V A R H + + +VQ+ P ++ + GR + + +G ++ Sbjct: 28 CARERVLAAARPIHAVRGELLVQQEDCPRGIYLVLDGRVKCFVLSPSGGEKIVRLAEPGS 87 Query: 69 FIG-EIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKNYRNI 127 F G E LI++ H A QAI L +P R +++ T F + L+ +Y ++ Sbjct: 88 FFGEEAALINRPHVANA-QAIGTSELLLVPTAALRTAMVSSTAFSVSMSNRLAEASY-DL 145 Query: 128 VSLTQNQSFPL---------VNRLAAFILLSQEGDLYHEKHTQAAEYLGVSYRHLLYVLA 178 +S Q Q F L + RLA E L +K T AA+ L ++ L +L+ Sbjct: 146 MSTMQVQ-FQLSGTQRVAHYLTRLAPEDAERCEIRLDIDKQTIAAQ-LNLTPETLSRILS 203 Query: 179 QFIHDGLL-IKSKKGYLIKNRKQLSGLA 205 Q DG++ + ++G ++ QL A Sbjct: 204 QLTRDGMIQPRGRRGMVLSKLSQLRDCA 231 >UniRef50_A3XG44 Transcriptional regulator, Crp/Fnr family protein n=1 Tax=Leeuwenhoekiella blandensis MED217 RepID=A3XG44_9FLAO Length = 188 Score = 44.3 bits (103), Expect = 0.003, Method: Compositional matrix adjust. Identities = 43/170 (25%), Positives = 69/170 (40%), Gaps = 5/170 (2%) Query: 6 FKDCFLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDFFA 65 F + T +A L F A++ ++ +G +F L G ++ NG+ ++ F + Sbjct: 11 FVEELYTQDTAGVSLVEFNAKEMLMHQGSAAQHVFILKSGLCKISLVEENGKEYILAFLS 70 Query: 66 APCFIGEIELIDKDHEPR--AVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKN 123 +GE+ELI EPR +VQA+ + L + LLN L L +L + + Sbjct: 71 TGEILGELELI--RDEPRLCSVQALNKVEAYKLTKTCFLN-LLNTDLKLNRLIINAYAER 127 Query: 124 YRNIVSLTQNQSFPLVNRLAAFILLSQEGDLYHEKHTQAAEYLGVSYRHL 173 N Q IL QE + + YLG+S R L Sbjct: 128 ITNTSKKASFQKLYTSENGLQRILKLQETENIEISKADLSAYLGISVRSL 177 >UniRef50_A7VTX4 Putative uncharacterized protein n=2 Tax=Clostridium RepID=A7VTX4_9CLOT Length = 230 Score = 44.3 bits (103), Expect = 0.003, Method: Compositional matrix adjust. Identities = 43/187 (22%), Positives = 83/187 (44%), Gaps = 11/187 (5%) Query: 27 DYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDFFA----APCFIGEIELIDKDHEP 82 +Y+ Q + + +F++ G+AR++ L +G I + CF+ +I + Sbjct: 44 EYLYQGDRDCTGVFWMRYGQARVF--LISGTEKQITLYRLLERDSCFLSASCVIKNINFD 101 Query: 83 RAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKNYRNIVSLTQNQSFPLVNRL 142 +QA ++C L LP Y+ L+ + L C + + +++ + + F ++R Sbjct: 102 VFIQAEKDCRILLLPANVYQDLM-EKSFPLATYCNQILASRFSDVMWVMEQTIFTSLDRR 160 Query: 143 AAFILLSQ----EGDLYHEKHTQAAEYLGVSYRHLLYVLAQFIHDGLLIKSKKGYLIKNR 198 A LL Q E H H + +LG + + +L F +GL+ S+ I + Sbjct: 161 LALFLLEQKAIDESSDLHITHEAISNHLGTAREVVTRMLKYFQEEGLVSLSRGAIEILDE 220 Query: 199 KQLSGLA 205 K+L LA Sbjct: 221 KRLKELA 227 >UniRef50_A9WTJ5 Transcription regulator, crp family n=122 Tax=Actinomycetales RepID=A9WTJ5_RENSM Length = 270 Score = 44.3 bits (103), Expect = 0.003, Method: Compositional matrix adjust. Identities = 48/193 (24%), Positives = 77/193 (39%), Gaps = 19/193 (9%) Query: 13 DVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDFFAAPCFIGE 72 D+S +FH EG Q L+++ G+ +L T +GR SL+ GE Sbjct: 76 DLSRGASVFH---------EGDQGDQLYFIVSGKVKLGRTAPDGRESLLAILGPGELFGE 126 Query: 73 IELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKNYRNIVSLTQ 132 + L D A+ E L + R LL +L L+ + R +L+ Sbjct: 127 MALFDPSPRTATATAVSETRLAGLRNESLRALLQTSPEVSAQLLQALARRLRRTNDNLSD 186 Query: 133 NQSFPLVNRLA-AFILLSQ-------EGDLYHEKHTQA--AEYLGVSYRHLLYVLAQFIH 182 + R+A A I LS+ +G L + TQ A+ +G S + LA+F+ Sbjct: 187 LVFSDVPGRVAKALIDLSERFGRPATDGVLVAHELTQEELAQLVGASRETVNKALAEFVQ 246 Query: 183 DGLLIKSKKGYLI 195 G L + +I Sbjct: 247 RGWLRLEARAVVI 259 >UniRef50_C4XL82 Crp family transcriptional regulator n=2 Tax=Desulfovibrio RepID=C4XL82_DESMR Length = 242 Score = 44.3 bits (103), Expect = 0.003, Method: Compositional matrix adjust. Identities = 49/179 (27%), Positives = 77/179 (43%), Gaps = 7/179 (3%) Query: 33 GQQPSWLFYLTRGRARLYATLANGRVSLIDFFAAPCFIGEIELIDKDHEPRAVQAIEECW 92 G F + G+ R+Y T G+ +I F E+ + P QA+EE Sbjct: 43 GDPAEGFFSVASGKVRIYQTSLAGKEHIIHVFGPGEVFAEVAVFAGGVYPANAQAMEEGD 102 Query: 93 CLALPMKHYRPLLLNDTLFLRKLCVTLSHKNYRNIVSLTQNQSFPLV-NRLAAFILL--- 148 L P + +R LL +D + LS + R +V ++ S V RLA+ +LL Sbjct: 103 YLFFPRERFRKLLADDPDLALTMLGLLSIR-LRQLVRKLEDLSLREVPARLASHLLLLGA 161 Query: 149 -SQEGDLYHE-KHTQAAEYLGVSYRHLLYVLAQFIHDGLLIKSKKGYLIKNRKQLSGLA 205 S++ L + Q A YLG L VL +F+ +GL+ + I + +L LA Sbjct: 162 QSKKRVLPLDLPKGQLAAYLGTIPETLSRVLRRFVDEGLISLTGSAVEILDAARLEALA 220 >UniRef50_Q2T0J6 Transcriptional regulator, putative n=61 Tax=Proteobacteria RepID=Q2T0J6_BURTA Length = 266 Score = 43.9 bits (102), Expect = 0.004, Method: Compositional matrix adjust. Identities = 45/173 (26%), Positives = 75/173 (43%), Gaps = 19/173 (10%) Query: 11 LTDVSADTRLFHFLARDYIV-QEGQQPSWLFYLTRGRARLYATLANGRVSLIDFFAAPCF 69 L D A T + LA ++ + G P L+ + G + A A+G+ +L+ + Sbjct: 25 LRDALAATAVPRRLAAGQVLFRRGDAPCGLYAVLSGALSVGAVDASGKEALLTVAEPMTW 84 Query: 70 IGEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHK---NYRN 126 GEI L D+ A+E+ + +P + LL + R L + ++ K ++ N Sbjct: 85 FGEIALFDELPRTHDAIALEDALLMHVPQAALQQLLDETPRYWRYLALLMAQKLRMSFMN 144 Query: 127 IVSLTQNQSFPLVNRLAAFILLSQEGDLYHEKHTQAAEYLGVSYRHLLYVLAQ 179 + +LT P RLAA +L+ EG Y G+S RH L+Q Sbjct: 145 VEALTL---MPAAQRLAARLLMIAEG------------YGGISTRHRRIRLSQ 182 >UniRef50_C0QTS3 Transcriptional regulator, Crp/Fnr family n=1 Tax=Persephonella marina EX-H1 RepID=C0QTS3_PERMH Length = 209 Score = 43.9 bits (102), Expect = 0.004, Method: Compositional matrix adjust. Identities = 47/179 (26%), Positives = 73/179 (40%), Gaps = 4/179 (2%) Query: 27 DYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDFFAAPCFIGEIELIDKDHEPRAVQ 86 D + EG++P L+ LT G R+Y T G + F I E + P + Sbjct: 33 DLLFYEGEEPENLYILTEGILRVYKTDIKGHEITLHHFHPVSLIAERANFENIPYPANAE 92 Query: 87 AIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKNYRNIVSLTQNQSFPLVNRLAAFI 146 L + K + LL D+ + +L +K + QN V R A FI Sbjct: 93 FETNGKVLVINFKTFEKELLKDSNLCFNIVKSLLYKIKILDDVIVQNLMMDAVTRTAKFI 152 Query: 147 LLSQEGDLYHE-KHTQAAEYLGVSYRHLLYVLAQFIHDGLLIKSKKGYLIKNRKQLSGL 204 + DL+ KH + A L ++ L +L +F G++ K Y I NR++L L Sbjct: 153 Y--EHEDLFISLKHNKIASILNMTPETLSRILKKFKTRGIIQKDGGTYKI-NREELKKL 208 >UniRef50_Q67K68 Putative cyclic nucleotide-binding transcriptional regulator n=1 Tax=Symbiobacterium thermophilum RepID=Q67K68_SYMTH Length = 223 Score = 43.5 bits (101), Expect = 0.005, Method: Compositional matrix adjust. Identities = 47/208 (22%), Positives = 83/208 (39%), Gaps = 17/208 (8%) Query: 5 AFKDCFLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDFF 64 D L ++A R H+ + EG ++++ +GR R+ ANG+ ++ + Sbjct: 15 GLSDEELARIAAIARERHYRKGTILFNEGDPGEAIYFIKKGRVRVSRLAANGQEQVLRVW 74 Query: 65 AAPCFIGEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLND-TLFLRKLCVTLSHKN 123 +G + L DK P Q E+ +A + LL TL C L + Sbjct: 75 GPGHEVGLVVLADKAPYPATAQVTEDSVLIAFRVDDLVQLLPESRTLAANAFC--LVGRR 132 Query: 124 YRNIVSLTQNQSFPLV-----NRLAAFIL---LSQEGDLYH--EKHTQAAEYLGVSYRHL 173 R L ++ + L RLAA +L Q D+ + H + A +G S + Sbjct: 133 LR----LARDTAHELAVHNTHGRLAALLLRMKAEQGSDVINLGMTHQEIAGMIGTSRETV 188 Query: 174 LYVLAQFIHDGLLIKSKKGYLIKNRKQL 201 VL F G + + +I++ ++L Sbjct: 189 TRVLGDFRRTGCIAVQGESVVIRDERKL 216 >UniRef50_C8P8H9 Putative uncharacterized protein n=1 Tax=Lactobacillus antri DSM 16041 RepID=C8P8H9_9LACO Length = 226 Score = 43.5 bits (101), Expect = 0.005, Method: Compositional matrix adjust. Identities = 25/103 (24%), Positives = 49/103 (47%) Query: 22 HFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDFFAAPCFIGEIELIDKDHE 81 HF + +++Q+G+Q + + L +GR +++ +G+ ++D + A F+GE E I Sbjct: 40 HFDTKQFLLQQGEQYQFTYLLVKGRVKVFLNSPSGKQVVLDVYDAGMFLGEQEAIINRPY 99 Query: 82 PRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKNY 124 ++ I LA+ + D F +L LS + Y Sbjct: 100 SASIINISPITVLAIRNADFVEWSQTDHRFADQLISNLSEQIY 142 >UniRef50_B5YAP2 Cyclic nucleotide-binding:Bacterial regulatory protein, Crp n=2 Tax=Dictyoglomus RepID=B5YAP2_DICT6 Length = 225 Score = 43.5 bits (101), Expect = 0.005, Method: Compositional matrix adjust. Identities = 45/188 (23%), Positives = 78/188 (41%), Gaps = 11/188 (5%) Query: 26 RDYIVQEGQQPSWLFYLT-RGRARLYATLANGRVSLIDFFAAPCFIGEIELIDKDHEPRA 84 +D I+ + + P F+L GR ++ G+ ++ F GE+ L+D + Sbjct: 35 KDSIIFQKEDPGNFFFLICSGRVKVIIETEEGKEGILAILYPTEFFGEMSLLDGEPRSAT 94 Query: 85 VQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLS---HKNYRNIVSLTQNQSFPLVNR 141 V A+EE + + + LL K+ TLS K R I +L + + R Sbjct: 95 VVALEETNVIIIERNEFLSLLYKHPELALKILKTLSLRLRKANRQIETLMFLDASGRIAR 154 Query: 142 LAAFILLSQ-----EGDLYHEKHT--QAAEYLGVSYRHLLYVLAQFIHDGLLIKSKKGYL 194 L I + EG L + T + +GVS + +L F +G+L + + Sbjct: 155 LLIDIARDRGKKVDEGVLIDLEFTRQELGNLIGVSRETTIRILKSFEEEGILSIERNHII 214 Query: 195 IKNRKQLS 202 IK+ K+L Sbjct: 215 IKDIKELE 222 >UniRef50_C1I2I0 Transcriptional regulatory protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=C1I2I0_9CLOT Length = 222 Score = 43.1 bits (100), Expect = 0.006, Method: Compositional matrix adjust. Identities = 26/97 (26%), Positives = 43/97 (44%), Gaps = 1/97 (1%) Query: 27 DYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDFFAAPCFIGEIELIDKDHE-PRAV 85 + I +G++ + L + G+A + NG+V + +F E L K+ E P V Sbjct: 37 EVIANQGEKCNSLSVVIDGKAVIQTIYENGKVLTLSYFNVSDVFAEALLFSKEKEYPATV 96 Query: 86 QAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHK 122 A E C L+ P K ++ +T F + LS K Sbjct: 97 MAFENCKVLSFPKKSVLGIIQKNTKFTENILELLSQK 133 >UniRef50_Q3ZWV2 Transcriptional regulator cNTP-binding, Crp n=2 Tax=Dehalococcoides RepID=Q3ZWV2_DEHSC Length = 247 Score = 42.4 bits (98), Expect = 0.011, Method: Compositional matrix adjust. Identities = 29/111 (26%), Positives = 51/111 (45%) Query: 12 TDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDFFAAPCFIG 71 T++S R +L +++ EG+ S +F +T+GR +L+ T NGR ++ + G Sbjct: 22 TEISHLFRRPEYLKNEHLFSEGEPASAVFVVTKGRIKLFKTSENGREIVLGYLTPNQLFG 81 Query: 72 EIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHK 122 E L + A A+E+ A + LL ++ K+ LS K Sbjct: 82 EEILFNDAIRTIAAVAVEDTKLCACYKNDFENLLSQNSQIAVKVIKALSDK 132 >UniRef50_A5VPJ1 Nitrogen fixation regulation protein fixk n=41 Tax=Brucellaceae RepID=A5VPJ1_BRUO2 Length = 251 Score = 42.4 bits (98), Expect = 0.012, Method: Compositional matrix adjust. Identities = 54/226 (23%), Positives = 98/226 (43%), Gaps = 27/226 (11%) Query: 4 SAFKDCFLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDF 63 SA D L + A + +V+EG+ ++ LT G R+Y +L +GR + F Sbjct: 35 SALDDGDLAALEAIMTSKKLDTNEMLVEEGEPKLRVYSLTSGMLRIYTSLPDGRRQIAGF 94 Query: 64 FAAPCFIGEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLL-----LNDTLF-LRKLCV 117 + F+G L D + ++ +A+ A K L+ L + L+ + +L + Sbjct: 95 LSPGDFLG---LADDEVYSQSAEAVVPSALCAFSAKEMERLMERFPKLKERLYQMTRLAL 151 Query: 118 TLSHKNYRNIVSLTQNQSFPLVNRLAAFIL-LSQEGDLYHEK---------HTQAAEYLG 167 + N L + P V +LA+F+L LS + EK T A+YLG Sbjct: 152 RTARDN-----QLVLGRLAP-VEKLASFLLVLSARAEKRGEKPNPVHLLMNRTDIADYLG 205 Query: 168 VSYRHLLYVLAQFIHDGLL-IKSKKGYLIKNRKQLSGLALEMDPEN 212 ++ + + GL+ ++ I +R+ L+ +A +DP+N Sbjct: 206 LTIETVSRSFTKLKTQGLIQLRDANTVEILSRRSLAVVA-GLDPDN 250 >UniRef50_A0NZG3 CAMP-binding protein-catabolite gene activator and regulatory subunit of cAMP-dependent protein kinase n=1 Tax=Labrenzia aggregata IAM 12614 RepID=A0NZG3_9RHOB Length = 234 Score = 42.0 bits (97), Expect = 0.013, Method: Compositional matrix adjust. Identities = 48/188 (25%), Positives = 68/188 (36%), Gaps = 10/188 (5%) Query: 25 ARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDFFAAPCFIGEIELIDKDHEPRA 84 A I G +P L + G R++ + A GR + GEI ++DK Sbjct: 34 AESAIFAAGDEPDGLRVIITGSIRIWISDAEGRELTLALLEPGDPFGEISVLDKLPRTAN 93 Query: 85 VQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKNYRNIVSLTQNQSFPLVNRLAA 144 A+ CL LP L F L L RN ++ L RLA Sbjct: 94 ASALANSECLFLPKDAMEIALDKSPQFAHHLIQLLCEILRRNTEAMGAFAFLGLDGRLAQ 153 Query: 145 FIL--------LSQEGDLYHEKHTQA--AEYLGVSYRHLLYVLAQFIHDGLLIKSKKGYL 194 +L L +G + K +Q A LGV+ L L HDGL+ + Sbjct: 154 KLLDLALSYADLKDDGAKFKRKFSQNELAHMLGVTREALNKRLNALAHDGLITLTNGLIS 213 Query: 195 IKNRKQLS 202 I N + L+ Sbjct: 214 IPNLEALA 221 >UniRef50_C1SKM4 cAMP-binding protein n=1 Tax=Denitrovibrio acetiphilus DSM 12809 RepID=C1SKM4_9BACT Length = 218 Score = 42.0 bits (97), Expect = 0.013, Method: Compositional matrix adjust. Identities = 35/117 (29%), Positives = 55/117 (47%), Gaps = 4/117 (3%) Query: 32 EGQQPSWLFYLTRGRARLYATLANGRVSLIDFFAAPCFIGEIELIDKDHEPRAVQAIEEC 91 E ++ S +F+L +G +LY T GR +++ F + EI L P +EEC Sbjct: 44 ENEEGSTVFFLVQGSIKLYRTNDEGREAVVHFVRSGEIFAEILLQLGLKYPVTSMTLEEC 103 Query: 92 WCLALPMKHYRPLLLNDTLFLRKLCVTLSH--KNYRNIV-SLTQNQSFP-LVNRLAA 144 + + K ++ D + +L LS K + N++ SLT N LVN LAA Sbjct: 104 DLVEIDAKKLEEIIAGDPMVSMRLIAALSRRIKYFVNLIESLTINDVRARLVNWLAA 160 >UniRef50_A6L679 Transcriptional regulator n=24 Tax=Bacteroidales RepID=A6L679_BACV8 Length = 233 Score = 42.0 bits (97), Expect = 0.013, Method: Compositional matrix adjust. Identities = 41/166 (24%), Positives = 69/166 (41%), Gaps = 30/166 (18%) Query: 22 HFLARDYIVQ----------EGQQPSWLFYLTRGRARLYATLANGRVSLI------DFFA 65 FLA+++ +Q EG+ P L L G+ ++Y GR +I ++FA Sbjct: 28 EFLAQNFTIQKYKKNETIYCEGETPMHLMCLLSGKVKIYKEGVGGRSQIIRVLKTKEYFA 87 Query: 66 APCFIGEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDT----LFLRKLCVTLSH 121 F E + A A E C +PM L+ +++ F+R+L + L Sbjct: 88 YRAFFAEGNFVT------AASAFEPCTICLIPMPAIMKLIKDNSELALFFIRQLSIDLGI 141 Query: 122 KNYRNIVSLTQNQSFPLVNRLAAFILLSQEGDLYHEKHTQAAEYLG 167 + R V+LTQ + RLA +L ++ E + + YL Sbjct: 142 SDERT-VNLTQKH---IRGRLAESLLFLKDTYGVEEDESTLSIYLS 183 >UniRef50_C9YCU2 Putative uncharacterized protein n=1 Tax=Curvibacter putative symbiont of Hydra magnipapillata RepID=C9YCU2_9BURK Length = 238 Score = 42.0 bits (97), Expect = 0.014, Method: Compositional matrix adjust. Identities = 32/133 (24%), Positives = 51/133 (38%), Gaps = 3/133 (2%) Query: 18 TRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANG---RVSLIDFFAAPCFIGEIE 74 R+ H A + + P L+ + RG R+ G R +++ + P + GEI Sbjct: 36 ARVRHLQAGEKLFLRDAAPCGLYAVVRGTIRISGHSGEGDGAREAVLVLLSPPQWFGEIS 95 Query: 75 LIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKNYRNIVSLTQNQ 134 + D A E C L +P + L R L V ++ K VS+ + Sbjct: 96 VFDGSARTHDAHAAEPCTLLHIPHEELLAWLTQHPAHWRDLAVLMADKLRLAFVSMEEQT 155 Query: 135 SFPLVNRLAAFIL 147 P RLA +L Sbjct: 156 VLPAPQRLARRLL 168 >UniRef50_Q023C9 Transcriptional regulator, Crp/Fnr family n=2 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q023C9_SOLUE Length = 236 Score = 42.0 bits (97), Expect = 0.015, Method: Compositional matrix adjust. Identities = 41/177 (23%), Positives = 71/177 (40%), Gaps = 9/177 (5%) Query: 32 EGQQPSWLFYLTRGRARLYATLANGRVSLIDFFAAPCFIGEIELIDKDHEPRAVQAIEEC 91 EG+ +F + +G +++ T GR ++ AP + E+ L D P +V+ E Sbjct: 54 EGEACVGIFLIIQGSVKIFRTSPGGREVMLCIETAPASVAELPLFDGGPYPASVRVTEPV 113 Query: 92 WCLALPMKHYRPLLL-NDTLFLRKLCVTLSHKNYRNIVSLTQNQSFPLVNRLAAFILLSQ 150 L + ++ N + L+ L V + R +V L + +F V + A +LL Sbjct: 114 VSLFINKSDFQQFCRQNPDVALKVLAVV--GRRLRQLVGLVEAMTFGSVTQRLAKMLLDA 171 Query: 151 EGDLYHE------KHTQAAEYLGVSYRHLLYVLAQFIHDGLLIKSKKGYLIKNRKQL 201 + E H + A LG + L +F GL+ + I NR L Sbjct: 172 SKEAGPEDFDLPATHQELASRLGTVREVISRNLGRFRAQGLIKIQDRQVEIVNRAGL 228 >UniRef50_B8HWS4 Cyclic nucleotide-binding protein n=1 Tax=Cyanothece sp. PCC 7425 RepID=B8HWS4_CYAP4 Length = 160 Score = 41.6 bits (96), Expect = 0.018, Method: Compositional matrix adjust. Identities = 25/72 (34%), Positives = 36/72 (50%), Gaps = 5/72 (6%) Query: 25 ARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDFFAAPCFIGEIELIDKDHEPRA 84 A I+QEG+ WL+ L GR +++ G + L + A F GEI L D Sbjct: 48 AGRTIIQEGEVGHWLYLLLSGRVQVHL----GDLQLTEL-APGAFFGEISLFDAQPRSAT 102 Query: 85 VQAIEECWCLAL 96 V A+E+C CL + Sbjct: 103 VTALEDCECLVI 114 >UniRef50_A1VYI2 Transcriptional regulator, putative n=15 Tax=Campylobacter RepID=A1VYI2_CAMJJ Length = 201 Score = 41.2 bits (95), Expect = 0.024, Method: Compositional matrix adjust. Identities = 48/183 (26%), Positives = 80/183 (43%), Gaps = 3/183 (1%) Query: 10 FLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDFFAAPCF 69 +L +S+ +L F + EG++ F L +G+ R+Y + A+ + + +F P F Sbjct: 7 YLELLSSVGKLKKFQKNSILFYEGEEAKKFFILLKGKIRIYKSTASDKEITLHYFNPPNF 66 Query: 70 IGEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKNYRNIVS 129 I E+ K + P E+ L + +++ L + F L +L K Sbjct: 67 IAEMPAFKKLNYPANAIFEEDGEILEIDFINFQNLCSENKEFNFLLISSLFDKIKILEKK 126 Query: 130 LTQNQSFPLVNRLAAFILLSQEGDLYHEKHTQAAEYLGVSYRHLLYVLAQFIHDGLLIKS 189 L+QN + L RL + LL E +L Q A L V + L VL + + LI + Sbjct: 127 LSQN-ALDLRTRLLKY-LLENEKNLDTISQKQIAIDLNVRAQSLSRVLKE-LKISELIDT 183 Query: 190 KKG 192 KKG Sbjct: 184 KKG 186 >UniRef50_A3EW66 Putative transcriptional regulator, Crp/Fnr family n=2 Tax=Leptospirillum sp. Group II RepID=A3EW66_9BACT Length = 237 Score = 41.2 bits (95), Expect = 0.024, Method: Compositional matrix adjust. Identities = 23/83 (27%), Positives = 36/83 (43%) Query: 19 RLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDFFAAPCFIGEIELIDK 78 RL H+ + I+QE + LF + G ++ GR ++ F GEI L+D Sbjct: 35 RLRHYRSGQKIIQEFDRGMELFVIVSGSVKISTEDVEGREIIVSIAYPSDFFGEIALLDD 94 Query: 79 DHEPRAVQAIEECWCLALPMKHY 101 D V AIE L++ + Sbjct: 95 DTRSATVTAIEPTTVLSIEKNDF 117 >UniRef50_A0LNW4 Transcriptional regulator, Crp/Fnr family n=3 Tax=Deltaproteobacteria RepID=A0LNW4_SYNFM Length = 228 Score = 41.2 bits (95), Expect = 0.025, Method: Compositional matrix adjust. Identities = 47/202 (23%), Positives = 79/202 (39%), Gaps = 11/202 (5%) Query: 11 LTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDFFAAPCFI 70 + DVS + + F + EG + + + + GR ++Y G+ ++ F A F Sbjct: 24 VADVSIEQK---FGKGQTLFSEGAKATGFYVIVSGRIKIYKLSLEGKEQILHIFGAGEFF 80 Query: 71 GEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKNYRNIVSL 130 E+ + P +AIE L P + L+ ++ + L + R + Sbjct: 81 AEVPVFAGGAFPAHAEAIEASRVLFFPRAAFIELVRSEPSLALNMLAILCQR-LRRFTHM 139 Query: 131 TQNQSFPLV-NRLAAFILL---SQEGDLYHEKHT---QAAEYLGVSYRHLLYVLAQFIHD 183 ++ S V RLAA++L EG E T Q A LG L +LA+ Sbjct: 140 VEDLSLKEVPGRLAAYLLYLGERAEGSDRLELDTTKGQLASLLGTIPETLSRILAKMSQQ 199 Query: 184 GLLIKSKKGYLIKNRKQLSGLA 205 + + I NR+ L LA Sbjct: 200 EFITVEGRRITILNREALENLA 221 >UniRef50_Q7V424 Possible mechanosensitive ion channel n=1 Tax=Prochlorococcus marinus str. MIT 9313 RepID=Q7V424_PROMM Length = 496 Score = 40.8 bits (94), Expect = 0.033, Method: Compositional matrix adjust. Identities = 32/125 (25%), Positives = 52/125 (41%), Gaps = 1/125 (0%) Query: 11 LTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDFFAAPCFI 70 L ++ TR F + I+++G+ L+ + G + T + G+ Sbjct: 348 LDALAPSTRCVRFAKGETIIRQGESGDCLYQMITGTVEVSQTNSQGQKITFQKLGQHEIF 407 Query: 71 GEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKNYRNIVSL 130 GE+ L K V+A+EE L + + +PL+ D + KL L H I SL Sbjct: 408 GEMALCTKQPRNSTVRALEESVLLEVERRDLQPLIDQDQGLVEKLA-RLVHLRQMEIGSL 466 Query: 131 TQNQS 135 Q QS Sbjct: 467 NQQQS 471 >UniRef50_A3I3X5 CAMP-binding domains-Catabolite gene activator and regulatory subunit of cAMP-dependent protein kinase n=1 Tax=Bacillus sp. B14905 RepID=A3I3X5_9BACI Length = 210 Score = 40.8 bits (94), Expect = 0.033, Method: Compositional matrix adjust. Identities = 37/160 (23%), Positives = 70/160 (43%), Gaps = 13/160 (8%) Query: 39 LFYLTRGRARLYATLANGRVSLIDFFAAPCFIGEIELIDKDHEPRAVQAIEECWCLALPM 98 L+++ RG+ RLY A G+ D GE+++I ++ IEE + Sbjct: 32 LYFVKRGKLRLYKVNAQGKQFTSDILNEGNVFGEMDIISFGTRENYIETIEESHICLMNK 91 Query: 99 KHYRPLLLNDTLFLRKLCVTLSHKNYRNIVSLTQNQSFPLVNR--LAAFILLSQE----G 152 + + L+ F+ L LS++ + LTQN + ++ L A I LS + G Sbjct: 92 ERFENFLIQRPQFMMTLLKVLSNR-IIGMSQLTQNLALGKLHDKVLYALIKLSDQFGLTG 150 Query: 153 DLYHEK------HTQAAEYLGVSYRHLLYVLAQFIHDGLL 186 D+ + K H + A +G + + VL + + + ++ Sbjct: 151 DIEYYKIDFPLSHQEIANLVGATREAVTVVLQELVKEEVI 190 >UniRef50_A8U8V8 Transcription regulator n=1 Tax=Carnobacterium sp. AT7 RepID=A8U8V8_9LACT Length = 232 Score = 40.8 bits (94), Expect = 0.033, Method: Compositional matrix adjust. Identities = 26/101 (25%), Positives = 46/101 (45%) Query: 22 HFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDFFAAPCFIGEIELIDKDHE 81 H+ + I + G+ L+ L G+ R+Y +G+ LI F GE+ L K Sbjct: 48 HYSRGETIYRPGETADSLYVLRSGKIRVYRLSDSGKEQLIRIVYPGEFTGELALFKKGIY 107 Query: 82 PRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHK 122 +A+ +C A+ +R LLL L ++ T+S++ Sbjct: 108 EAFTEALTDCSICAIKHTDFRELLLQYPLIAVEMLATISNR 148 >UniRef50_B6IXV7 Transcriptional regulator, Crp n=1 Tax=Rhodospirillum centenum SW RepID=B6IXV7_RHOCS Length = 235 Score = 40.8 bits (94), Expect = 0.036, Method: Compositional matrix adjust. Identities = 48/200 (24%), Positives = 77/200 (38%), Gaps = 43/200 (21%) Query: 22 HFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDFFAAPCFIGEIELIDKDHE 81 F + I +G L+ + RGR ++ + +V L++ AA GEI ++D Sbjct: 41 RFAPDERIFTKGDPGDCLYAILRGRVAVHTESEDAKVMLLNTLAAGEVFGEIAMLDGGER 100 Query: 82 PRAVQAIEECWCLALPMKHYRPLL------------------------LNDTLFLRKLCV 117 V A E L + + + P L + DT+FL Sbjct: 101 TATVTAAEPADLLRIDRRDFLPFLEARPNLCIRLMTVLCERLRWTSAIIEDTVFL----- 155 Query: 118 TLSHKNYRNIVSLTQNQS--FPLVNRLAAFILLSQEGDLYHEKHTQAAEYLGVSYRHLLY 175 + + + I+ L Q++ P R+A F+ SQ+ A+ LGVS + Sbjct: 156 NVPRRLAKRILMLAQSEGRQTPDGIRIATFV--SQDA---------LAKMLGVSREIVNK 204 Query: 176 VLAQFIHDGLLIKSKKGYLI 195 L F DG I + GYLI Sbjct: 205 TLKSFQADG-AIAYRSGYLI 223 >UniRef50_A6FY92 Cyclic nucleotide-binding:Bacterial regulatory protein, Crp n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6FY92_9DELT Length = 198 Score = 40.4 bits (93), Expect = 0.038, Method: Compositional matrix adjust. Identities = 23/91 (25%), Positives = 40/91 (43%), Gaps = 4/91 (4%) Query: 26 RDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDFFAAPCFIGEIELIDKDHEPRAV 85 R I G +F++ GR + +G+ + + A GE+ +ID Sbjct: 9 RQVIYLPGDPGEQIFFINGGRVKTSKVTRDGKELTLAYRGAGQIFGELAVIDGSPREEMA 68 Query: 86 QAIEECWCLALPMKHYRPLLLNDTLFLRKLC 116 +A++ LP++ +R LL+ DT KLC Sbjct: 69 EAMKNAIITELPIEVFRELLMEDT----KLC 95 >UniRef50_P74678 DNR protein n=1 Tax=Synechocystis sp. PCC 6803 RepID=P74678_SYNY3 Length = 238 Score = 40.4 bits (93), Expect = 0.039, Method: Compositional matrix adjust. Identities = 26/122 (21%), Positives = 55/122 (45%), Gaps = 2/122 (1%) Query: 27 DYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDFFAAPCFIGEIELIDKDHEPRAVQ 86 D + +EG +P F + GR ++Y G+ ++ F EI + D P + Sbjct: 41 DVVFKEGDKPKGFFIVRSGRVKIYKIAPGGKEQILRIFHRGEHFAEIAVFDNLPFPASAA 100 Query: 87 AIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKNYRNIVSLTQNQSFPLV-NRLAAF 145 +++ + P + +L + +LS ++ R++ ++ + SF V RLA++ Sbjct: 101 TLDQAEMIFFPRSPFLEMLAQHPTLALNMLSSLS-RHLRHLTAVIEELSFKDVPQRLASY 159 Query: 146 IL 147 +L Sbjct: 160 LL 161 >UniRef50_B1I644 Cyclic nucleotide-binding protein n=1 Tax=Candidatus Desulforudis audaxviator MP104C RepID=B1I644_DESAP Length = 641 Score = 40.4 bits (93), Expect = 0.040, Method: Compositional matrix adjust. Identities = 30/131 (22%), Positives = 64/131 (48%), Gaps = 6/131 (4%) Query: 4 SAFKDCFLTDVSADTRLFHFLARDYIVQEGQQPSW--LFYLTRGRARLYATLANGRVSLI 61 S+ + L +++ T L F Y+ ++G P+ LF + G A + T + G+ S++ Sbjct: 15 SSLSEAVLEELAPQTYLKAFPKGTYVFRQGT-PTLHALFIVVEGLAEVTVTNSRGKESVV 73 Query: 62 DFFAAPCFIGEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLND---TLFLRKLCVT 118 F F GE ++ + P +V+A ++ CL +P + + L+ + + F ++ ++ Sbjct: 74 SFRHPHDFFGETVVLTDEEYPGSVRARKDLTCLVMPREVFERLMYHHPEVSRFFSRVLLS 133 Query: 119 LSHKNYRNIVS 129 Y+ IV+ Sbjct: 134 RMRSLYQEIVA 144 >UniRef50_C0QS01 Transcriptional regulator, Crp/Fnr family n=1 Tax=Persephonella marina EX-H1 RepID=C0QS01_PERMH Length = 223 Score = 40.4 bits (93), Expect = 0.044, Method: Compositional matrix adjust. Identities = 46/200 (23%), Positives = 82/200 (41%), Gaps = 12/200 (6%) Query: 5 AFKDCFLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDFF 64 F F + +++ + IV +G++ S LF + GR + G +ID F Sbjct: 17 GFGGDFFRHIIPYMKIYQYQKGKEIVYQGEESSDLFIILEGRIKASIFDDEGNELVIDIF 76 Query: 65 AAPCFIGEIELIDKDHEPRAVQAIEECWCL--ALPMKHYRPLLLNDTLFLRKLCVTLSHK 122 F+GE+ LI D +PR+ I E + L K++ +L KL L ++ Sbjct: 77 GEGDFVGELSLI--DGKPRSASLIAETDVVVAVLERKYFIEILKKYPELCLKLAENLVYR 134 Query: 123 NYRNIVSLTQNQSFPLVNR--LAAFILLSQEGD-----LYHEKHTQAAEYLGVSYRHLLY 175 R ++ +F V + FI + E D + H + A+ +G S + Sbjct: 135 -LRKADKFLESLAFLDVKERIINLFIESAVENDERVYKVPKMSHREIAKRIGASRESVTK 193 Query: 176 VLAQFIHDGLLIKSKKGYLI 195 L +F G+L + Y++ Sbjct: 194 ALKRFSELGILSEDNNMYIL 213 >UniRef50_C2H745 Possible cyclic nucleotide-binding protein (Fragment) n=1 Tax=Enterococcus faecium TX1330 RepID=C2H745_ENTFC Length = 154 Score = 40.4 bits (93), Expect = 0.047, Method: Compositional matrix adjust. Identities = 31/132 (23%), Positives = 62/132 (46%), Gaps = 1/132 (0%) Query: 71 GEIELI-DKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKNYRNIVS 129 ++EL+ + + +V + + +P + + + + F+ L LS + + Sbjct: 9 SDVELMSNTTYATASVITLSPFEVIIVPFQDDQDSIFKNLTFMTTLAKGLSENLINSSHN 68 Query: 130 LTQNQSFPLVNRLAAFILLSQEGDLYHEKHTQAAEYLGVSYRHLLYVLAQFIHDGLLIKS 189 T N + RL +IL + + + T A +G+SYRHLL +L + DG+L + Sbjct: 69 YTSNALYSGEQRLCTYILQGSYKNYFFDNLTDVAATIGISYRHLLLLLNKLCDDGILKRE 128 Query: 190 KKGYLIKNRKQL 201 K+ + I + +QL Sbjct: 129 KRKFQITDMEQL 140 >UniRef50_B6J587 CAAX amino terminal protease family n=3 Tax=Coxiella burnetii RepID=B6J587_COXB1 Length = 403 Score = 40.0 bits (92), Expect = 0.053, Method: Compositional matrix adjust. Identities = 32/123 (26%), Positives = 57/123 (46%), Gaps = 6/123 (4%) Query: 19 RLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVS-LIDFFAAPCFIGEIELID 77 ++ HF D+I++E Q+P ++++ +G+ + L + I A IGE+ L+D Sbjct: 52 KIIHFDKGDFIIREKQKPEAIYFVLKGKLAVIRQLREEKHEHQIATLKAGDTIGEMSLLD 111 Query: 78 KDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRK----LCVTLSHK-NYRNIVSLTQ 132 K ++QA+ + L M + L+ +K L TLS + Y N V + Sbjct: 112 KQPRSASIQALNDVTVFVLAMDDFNSLINAKPDLYKKIMSQLSATLSRRLRYTNDVVVAS 171 Query: 133 NQS 135 QS Sbjct: 172 LQS 174 >UniRef50_C6WVL6 Transcriptional regulator, Crp/Fnr family n=1 Tax=Methylotenera mobilis JLW8 RepID=C6WVL6_METML Length = 227 Score = 40.0 bits (92), Expect = 0.055, Method: Compositional matrix adjust. Identities = 27/115 (23%), Positives = 50/115 (43%) Query: 11 LTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDFFAAPCFI 70 +T ++ ++L + + G+ L+ L +G+ +L T G +I + Sbjct: 24 ITSIAEHSQLIDYPKGTSVFNRGEAAVGLYILLKGQLKLGVTSPQGSEKIISIVSPGDSF 83 Query: 71 GEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKNYR 125 GE L + P QA + L +P +L NDT+F RK+ LS + ++ Sbjct: 84 GEAILFLERQFPVYAQATLDSQVLLVPKSLIFSMLDNDTMFARKMLAGLSVRMHQ 138 >UniRef50_C3RK73 CRP/FNR family transcriptional regulator n=3 Tax=Bacteria RepID=C3RK73_9MOLU Length = 203 Score = 40.0 bits (92), Expect = 0.057, Method: Compositional matrix adjust. Identities = 37/184 (20%), Positives = 73/184 (39%), Gaps = 1/184 (0%) Query: 20 LFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDFFAAPCFIGEIELIDKD 79 L + D I + + L+ + +GR R+Y +G+ +D GE + Sbjct: 17 LIKYQPNDIIYMQEDSSNNLYLILKGRVRVYLISKDGQEITLDIIDKGRIFGESSFLLNT 76 Query: 80 HEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKNYRNIVSLTQNQSFPLV 139 P V AI+E ++ +++ P +L + LS N + + + Sbjct: 77 SRPVCVSAIDEVKLISCNLENLYPAILESKELTIAIMQLLSSTNDHLTNQVKKAYFYNRH 136 Query: 140 NRLAAFILLSQEGDLYHEKHTQAAEYLGVSYRHLLYVLAQFIHDGLLIKSKKGYLIKNRK 199 ++AAF LL Q+ H + A G++ + +L F G + + + +I + Sbjct: 137 EKIAAF-LLEQKKKTISYTHEEIASLTGLNRVTVTKILNDFYQKGWIDLAYRKIIIVDHD 195 Query: 200 QLSG 203 +LS Sbjct: 196 ELSN 199 >UniRef50_A6Q6Z4 Transcriptional regulator, Crp/Fnr family n=1 Tax=Sulfurovum sp. NBC37-1 RepID=A6Q6Z4_SULNB Length = 233 Score = 40.0 bits (92), Expect = 0.063, Method: Compositional matrix adjust. Identities = 43/203 (21%), Positives = 84/203 (41%), Gaps = 12/203 (5%) Query: 4 SAFKDCFLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDF 63 SA +L ++ T + + + EG + +L L G +LY T G I+ Sbjct: 11 SALTGTYLKELYDQTHIKQYAKDSIVFYEGDESKYLHILLDGNIKLYKTTPKGTQIQINR 70 Query: 64 FAAPCFIGEIELIDKDHEPRAVQAIEECWCLALPM----KHYRPLLLNDTLFLRKLCVTL 119 AAP IGE + P + + + LP KH L++ F ++ +L Sbjct: 71 LAAPAMIGEYACFENQPFPATCEFLTDGVMGLLPFDFVYKH-----LDNPGFSLEIIKSL 125 Query: 120 SHKNYRNIVSLTQNQSFPLVNRLAAFILLSQEGDLYHE-KHTQAAEYLGVSYRHLLYVLA 178 + K ++S ++ L + L++Q+ L+ K+ + A L ++ +L Sbjct: 126 TGK--VALLSALVHKETVLSSEAKVADLMTQKLPLFQRLKNNEIASMLNLTPETFSRILT 183 Query: 179 QFIHDGLLIKSKKGYLIKNRKQL 201 +F +G++ + +I N + L Sbjct: 184 KFKKEGIITVKNQKIIILNEEAL 206 >UniRef50_Q3M891 Transcriptional regulator, Crp/Fnr family n=2 Tax=Cyanobacteria RepID=Q3M891_ANAVT Length = 231 Score = 39.7 bits (91), Expect = 0.080, Method: Compositional matrix adjust. Identities = 27/122 (22%), Positives = 52/122 (42%), Gaps = 2/122 (1%) Query: 27 DYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDFFAAPCFIGEIELIDKDHEPRAVQ 86 + I EG + + F + GR +++ G+ + F A + E+ D + P + Sbjct: 44 EIIFWEGDEGTGFFIVKSGRVKIFKVANGGKEQIFHIFGAEEYFAEVPAFDGGNYPASAA 103 Query: 87 AIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKNYRNIVSLTQNQSFPLV-NRLAAF 145 A+E + +P + +L + TL+ ++ R + L SF V RLA + Sbjct: 104 ALENSQVVFIPRSSFLTVLQQHPTLALAILGTLA-RHLRKLTHLVDTLSFQEVPQRLANY 162 Query: 146 IL 147 +L Sbjct: 163 LL 164 >UniRef50_D0XU25 Transcriptional regulator, Crp/Fnr family n=1 Tax=Caulobacter segnis ATCC 21756 RepID=D0XU25_9CAUL Length = 212 Score = 39.7 bits (91), Expect = 0.082, Method: Compositional matrix adjust. Identities = 40/165 (24%), Positives = 70/165 (42%), Gaps = 11/165 (6%) Query: 29 IVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDFFAAPCFIGEIELIDKDHE-PRAVQA 87 I +G+ ++ L G R Y L +GR + DF G++ ++ E + + Sbjct: 31 IFAQGEAVDTVYQLLAGAVRTYRLLGDGRRHVCDFHVP----GDVLGLEPGGEYACSAEG 86 Query: 88 IEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKNYRNIVSLTQNQSFPLVNRLAAFIL 147 + + LA+P+ R L +D L ++L SH R+ T V R+AAF++ Sbjct: 87 MTDVIMLAIPVATLRRLSAHDPLLGQRLLSIASHGLQRSQNHATMLARLGAVERVAAFLI 146 Query: 148 -LSQEGDLYHE-----KHTQAAEYLGVSYRHLLYVLAQFIHDGLL 186 +Q D E A+YLG++ + L+ GL+ Sbjct: 147 DFAQRFDADDEFDLPMTRQDIADYLGLTIHTVSRTLSHLQDQGLI 191 >UniRef50_C0D6I1 Putative uncharacterized protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0D6I1_9CLOT Length = 215 Score = 39.3 bits (90), Expect = 0.084, Method: Compositional matrix adjust. Identities = 46/180 (25%), Positives = 76/180 (42%), Gaps = 4/180 (2%) Query: 29 IVQEGQQPSWLFYLTRGRARLYATLANGR-VSLIDFFAAPCFIGEIELIDKDHEPRAVQA 87 I++ +Q S LF L G A +Y NG +SL + CF GE+EL + V A Sbjct: 36 ILRPDEQNSSLFLLLEGTAEVYIYTLNGMFISLYRYEKDGCF-GEVELFCESRTTLGVSA 94 Query: 88 IEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKNYRNIVSLTQNQSFPLVNR-LAAFI 146 ++ C + +P + + D F L ++ K N ++ S L +R L Sbjct: 95 VDPCKVVRIPKRGVEIWMREDHRFSEFLLRHMALKIAENSDHYIRSASMDLKSRVLHCLY 154 Query: 147 LLSQEGDLYHEKHTQAAEYLGVSYRHLLYVLAQFIHDGLL-IKSKKGYLIKNRKQLSGLA 205 Q G L Q + R L +LAQ +GL+ ++ + Y++ + + LA Sbjct: 155 RHKQLGSLSVLTKEQLMSEVCTPLRSLNRILAQCREEGLVKYETHRFYILDEERFAAALA 214 >UniRef50_A9NH90 Transcriptional regulator, Crp/Fnr family n=1 Tax=Acholeplasma laidlawii PG-8A RepID=A9NH90_ACHLI Length = 231 Score = 39.3 bits (90), Expect = 0.090, Method: Compositional matrix adjust. Identities = 39/180 (21%), Positives = 71/180 (39%), Gaps = 7/180 (3%) Query: 22 HFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDFFAAPCFIGEIELIDKDHE 81 H+ A I G+ + ++RG+ R+Y +GR LI F GE+ L + Sbjct: 37 HYSAGQMIYSPGESAGSIHIISRGKVRIYRLSESGREQLIRLLLPGEFTGELALFKEGIY 96 Query: 82 PRAVQAIEECWCLALPMKHYRPLLLN----DTLFLRKLCVTLSHKNYRNIVSLTQNQSFP 137 +++E+ + ++ LL + L L LS ++ T+ Sbjct: 97 EAYAESLEDTKICMIHHDDFKNLLKSYPAISVKMLSVLAKRLSISEQQSTWMSTETSKER 156 Query: 138 LVNRLAAFILLSQEGDLY---HEKHTQAAEYLGVSYRHLLYVLAQFIHDGLLIKSKKGYL 194 L+N L L+++G++ A YLG + L DG++ +S K Y+ Sbjct: 157 LINFLIRSATLNKQGEMVVYLPMPKKDLASYLGTTPETLSRQFTILKKDGVITQSSKNYV 216 >UniRef50_C6PUD3 Cyclic nucleotide-binding protein n=1 Tax=Clostridium carboxidivorans P7 RepID=C6PUD3_9CLOT Length = 225 Score = 39.3 bits (90), Expect = 0.090, Method: Compositional matrix adjust. Identities = 40/190 (21%), Positives = 81/190 (42%), Gaps = 5/190 (2%) Query: 20 LFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDFFAAPCFIGEIELIDKD 79 +F + +++G+ + F + G A ++ NG+ + FIGE+E+ + Sbjct: 33 IFKYKKGKMFLKQGEIYPYFFIIIEGEANIFIMSHNGKRYSQSIYTKGNFIGELEIFNNI 92 Query: 80 HEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKNYRNIVSLTQNQSFPLV 139 +++AI + LAL +++ D R + +S Y ++ + L Sbjct: 93 PFSCSIEAITDIKLLALKREYFLKWYDMDKNISRYITEQMSFAFYTLSQKSAEDTLYTLR 152 Query: 140 NRLAAFIL----LSQEGDLYHEKHTQAAEYLGVSYRHLLYVLAQFIHDGLLIKSKKGYLI 195 R+ ++L S + ++ +K T AA+ L V+ R L +F +G+L S I Sbjct: 153 ERICNYLLEEYSKSFKTNIKIDKDTLAAQ-LAVTKRSLNRTFMEFRKEGILEISNSQVFI 211 Query: 196 KNRKQLSGLA 205 + +L L Sbjct: 212 NDLNKLKNLT 221 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_P0A9F0 Regulatory protein nsr n=59 Tax=Enterobacteriace... 290 2e-77 UniRef50_Q814L9 Catabolite gene activator n=33 Tax=Bacillus RepI... 238 1e-61 UniRef50_A0RLJ1 Cyclic nucleotide-binding domain protein n=37 Ta... 238 1e-61 UniRef50_D1ART3 Transcriptional regulator, Crp/Fnr family n=1 Ta... 235 6e-61 UniRef50_Q03NI3 Crp-like transcriptional regulator n=1 Tax=Lacto... 233 3e-60 UniRef50_A3IBY0 DNA-binding transcriptional activator of station... 231 1e-59 UniRef50_C6LEY7 Regulatory protein nsr n=1 Tax=Bryantella format... 231 1e-59 UniRef50_A0RGL8 Cyclic nucleotide-binding domain protein n=90 Ta... 217 2e-55 UniRef50_Q2BCV7 Cyclic nucleotide-binding domain protein n=2 Tax... 216 5e-55 UniRef50_B0ABB5 Putative uncharacterized protein n=1 Tax=Clostri... 215 7e-55 UniRef50_A6LU88 Cyclic nucleotide-binding protein n=3 Tax=Clostr... 209 5e-53 UniRef50_Q0TU94 Cyclic nucleotide-binding domain protein n=8 Tax... 202 8e-51 UniRef50_C0ZJL4 Probable transcriptional regulator n=1 Tax=Brevi... 201 1e-50 UniRef50_C0D933 Putative uncharacterized protein n=1 Tax=Clostri... 201 2e-50 UniRef50_D0AGV6 Predicted protein n=2 Tax=Enterococcus RepID=D0A... 200 3e-50 UniRef50_C6D048 Transcriptional regulator, Crp/Fnr family n=1 Ta... 193 2e-48 UniRef50_B1YHB5 Cyclic nucleotide-binding protein n=2 Tax=Exiguo... 190 2e-47 UniRef50_C9A466 Cyclic nucleotide-binding domain-containing prot... 190 3e-47 UniRef50_UPI00018512E8 cyclic nucleotide-binding protein n=1 Tax... 189 5e-47 UniRef50_A8FDX9 Possible Crp family transcriptional regulator n=... 189 7e-47 UniRef50_C3RH00 Cyclic nucleotide-binding protein n=2 Tax=Bacter... 188 8e-47 UniRef50_C9A6F2 Cyclic nucleotide-binding domain-containing prot... 188 1e-46 UniRef50_A9KNS6 Cyclic nucleotide-binding protein n=2 Tax=Clostr... 187 2e-46 UniRef50_B9DTE0 Crp family regulatory protein n=2 Tax=Streptococ... 184 2e-45 UniRef50_Q03MP5 Crp-like transcriptional regulator n=4 Tax=Strep... 182 9e-45 UniRef50_Q3D9B2 Cyclic nucleotide-binding domain protein n=11 Ta... 181 1e-44 UniRef50_C0X6Y2 Cyclic nucleotide-binding domain protein n=22 Ta... 181 1e-44 UniRef50_B7H5E4 Catabolite gene activator n=39 Tax=Bacillus cere... 180 3e-44 UniRef50_C7UQ67 Predicted protein n=2 Tax=Enterococcus faecalis ... 177 3e-43 UniRef50_UPI0001C3627B cyclic nucleotide-binding protein n=1 Tax... 175 1e-42 UniRef50_C5EL33 Cyclic nucleotide-binding protein n=1 Tax=Clostr... 175 1e-42 UniRef50_A5I0L6 Cyclic nucleotide-binding domain protein n=19 Ta... 174 2e-42 UniRef50_C5WE90 Cyclic nucleotide-binding domain protein n=1 Tax... 173 4e-42 UniRef50_C8ZXE5 Cyclic nucleotide-binding domain-containing prot... 173 5e-42 UniRef50_A2RKL5 Cyclic nucleotide-binding domain protein n=1 Tax... 173 5e-42 UniRef50_A0RHC9 Transcriptional regulator, Crp/Fnr family n=5 Ta... 168 2e-40 UniRef50_B1MYN1 Cyclic AMP receptor protein, putative n=1 Tax=Le... 166 4e-40 UniRef50_C4IGF0 Cyclic nucleotide-binding domain protein n=2 Tax... 165 1e-39 UniRef50_UPI0001B9EE88 putative transcriptional regulator, Crp/F... 164 2e-39 UniRef50_C3AP08 Transcriptional regulator, Crp/Fnr n=3 Tax=Bacil... 163 4e-39 UniRef50_C4L0C4 Transcriptional regulator, Crp/Fnr family n=1 Ta... 163 5e-39 UniRef50_A9KSA1 Cyclic nucleotide-binding protein n=2 Tax=Clostr... 162 7e-39 UniRef50_B2V833 Transcriptional regulator, Crp/Fnr family n=2 Ta... 161 1e-38 UniRef50_Q30Y06 Transcriptional regulator, Crp/Fnr family n=6 Ta... 160 3e-38 UniRef50_D1AN20 Putative transcriptional regulator, Crp/Fnr fami... 157 2e-37 UniRef50_Q2SHS2 CAMP-binding protein-catabolite gene activator a... 156 6e-37 UniRef50_A3I0Z6 Putative FNR-family transcriptional regulator pr... 153 3e-36 UniRef50_Q2G6R8 Transcriptional regulator, Crp/Fnr family n=3 Ta... 153 3e-36 UniRef50_A7GXI3 Transcription regulator n=5 Tax=Campylobacter Re... 152 6e-36 UniRef50_B8D2C4 Putative transcriptional regulator, Crp/Fnr fami... 151 1e-35 UniRef50_C6XD76 Transcriptional regulator, Crp/Fnr family n=1 Ta... 151 2e-35 UniRef50_A7NFZ8 Transcriptional regulator, Crp/Fnr family n=6 Ta... 151 2e-35 UniRef50_B8GAV8 Transcriptional regulator, Crp/Fnr family n=3 Ta... 149 5e-35 UniRef50_B5YHX8 Transcriptional regulator, putative n=1 Tax=Ther... 149 6e-35 UniRef50_D2QLW5 Transcriptional regulator, Crp/Fnr family n=1 Ta... 149 8e-35 UniRef50_C0GFA6 Transcriptional regulator, Crp/Fnr family n=1 Ta... 147 2e-34 UniRef50_B2UJ25 Transcriptional regulator, Crp/Fnr family n=10 T... 147 3e-34 UniRef50_Q30QZ1 Putative transcriptional regulator, Crp/Fnr fami... 146 4e-34 UniRef50_A6EDB2 Putative FNR-family transcriptional regulator pr... 146 5e-34 UniRef50_B1HPB0 Regulatory protein nsr n=1 Tax=Lysinibacillus sp... 146 6e-34 UniRef50_C9KQT9 Transcriptional regulator, Crp/Fnr family n=1 Ta... 144 1e-33 UniRef50_C4KA14 Transcriptional regulator, Crp/Fnr family n=1 Ta... 144 1e-33 UniRef50_C2CK26 Transcriptional regulator n=1 Tax=Anaerococcus t... 143 3e-33 UniRef50_A3WI44 Transcriptional regulator, Crp/Fnr family protei... 141 1e-32 UniRef50_C3X8Q5 Transcriptional regulator n=1 Tax=Oxalobacter fo... 141 1e-32 UniRef50_C2XKA0 Transcriptional regulator n=2 Tax=Bacillaceae Re... 140 3e-32 UniRef50_Q7N3E6 Similar to transcription regulator n=2 Tax=Photo... 140 4e-32 UniRef50_C0QQT2 Transcription regulator n=1 Tax=Persephonella ma... 139 4e-32 UniRef50_B6BLA3 Transcription regulator n=1 Tax=Campylobacterale... 139 6e-32 UniRef50_A6LCQ3 cAMP-binding domain transcriptional regulator n=... 138 9e-32 UniRef50_C3XLC9 Putative uncharacterized protein n=4 Tax=Helicob... 134 2e-30 UniRef50_D1TDT1 Putative transcriptional regulator, Crp/Fnr fami... 134 2e-30 UniRef50_C7PAL9 Transcriptional regulator, Crp/Fnr family n=2 Ta... 134 2e-30 UniRef50_UPI000197CA44 hypothetical protein PretD1_04436 n=1 Tax... 133 3e-30 UniRef50_B3RC77 Putative cyclic nucleotide-binding regulatory pr... 132 1e-29 UniRef50_D1PKF6 Putative cyclic nucleotide-binding domain protei... 131 2e-29 UniRef50_A7I340 Transcription regulator n=1 Tax=Campylobacter ho... 130 3e-29 UniRef50_B8K4D0 Putative cAMP-binding protein n=1 Tax=Vibrio par... 129 9e-29 UniRef50_C0CR54 Putative uncharacterized protein n=1 Tax=Blautia... 127 3e-28 UniRef50_Q4ZZV6 Cyclic nucleotide-binding n=5 Tax=Pseudomonas sy... 119 7e-26 Sequences not found previously or not previously below threshold: UniRef50_B8CWR3 Putative transcriptional regulator, Crp/Fnr fami... 152 7e-36 UniRef50_B8FJ06 Transcriptional regulator, Crp/Fnr family n=1 Ta... 151 1e-35 UniRef50_A0LNW4 Transcriptional regulator, Crp/Fnr family n=3 Ta... 151 1e-35 UniRef50_Q39ZI3 Transcriptional regulator, Crp/Fnr family n=9 Ta... 147 3e-34 UniRef50_C4XL82 Crp family transcriptional regulator n=2 Tax=Des... 146 4e-34 UniRef50_C1TP24 cAMP-binding protein n=1 Tax=Dethiosulfovibrio p... 146 6e-34 UniRef50_Q2LPZ1 Cyclic nucleotide-binding domain protein n=4 Tax... 145 1e-33 UniRef50_C0QTS3 Transcriptional regulator, Crp/Fnr family n=1 Ta... 143 4e-33 UniRef50_A9WTJ5 Transcription regulator, crp family n=122 Tax=Ac... 142 9e-33 UniRef50_Q2SDD5 CAMP-binding protein-catabolite gene activator a... 141 1e-32 UniRef50_Q3A4H0 Transcriptional regulator, Crp/Fnr family n=1 Ta... 141 1e-32 UniRef50_C1A7L5 Crp family transcriptional regulator n=1 Tax=Gem... 141 2e-32 UniRef50_Q3AF29 Transcriptional regulator, Crp/Fnr family n=1 Ta... 140 3e-32 UniRef50_Q3M891 Transcriptional regulator, Crp/Fnr family n=2 Ta... 140 4e-32 UniRef50_B8FC47 Transcriptional regulator, Crp/Fnr family n=1 Ta... 139 4e-32 UniRef50_C7LNX8 Transcriptional regulator, Crp/Fnr family n=1 Ta... 139 5e-32 UniRef50_B0K8F6 Transcriptional regulator, Crp/Fnr family n=11 T... 139 5e-32 UniRef50_Q21SN7 Transcriptional regulator, Crp/Fnr family n=1 Ta... 138 9e-32 UniRef50_B2A710 Transcriptional regulator, Crp/Fnr family n=1 Ta... 138 1e-31 UniRef50_C7PII7 Transcriptional regulator, Crp/Fnr family n=1 Ta... 138 1e-31 UniRef50_P74678 DNR protein n=1 Tax=Synechocystis sp. PCC 6803 R... 137 2e-31 UniRef50_Q7M956 PUTATIVE TRANSCRIPTIONAL REGULATOR n=1 Tax=Wolin... 137 3e-31 UniRef50_C7PGE5 Transcriptional regulator, Crp/Fnr family n=2 Ta... 136 4e-31 UniRef50_A0NZG3 CAMP-binding protein-catabolite gene activator a... 136 7e-31 UniRef50_Q5NXU3 Catabolite gene activator (CAMP receptor protein... 135 8e-31 UniRef50_D1CAF8 Transcriptional regulator, Crp/Fnr family n=1 Ta... 135 8e-31 UniRef50_C9YCU2 Putative uncharacterized protein n=1 Tax=Curviba... 135 9e-31 UniRef50_A6Q6Z4 Transcriptional regulator, Crp/Fnr family n=1 Ta... 135 1e-30 UniRef50_A9BMG5 Transcriptional regulator, Crp/Fnr family n=7 Ta... 134 1e-30 UniRef50_A0XZU1 Transcriptional regulator, Crp/Fnr family protei... 134 1e-30 UniRef50_B8HYC6 Transcriptional regulator, Crp/Fnr family n=2 Ta... 133 3e-30 UniRef50_B5EPN3 Transcriptional regulator, Crp/Fnr family n=6 Ta... 133 3e-30 UniRef50_B8CZ46 Putative transcriptional regulator, Crp/Fnr fami... 133 3e-30 UniRef50_B7GKB9 Transcriptional regulator, Crp family n=13 Tax=B... 133 4e-30 UniRef50_A6Q5Z4 Transcriptional regulator, Crp/Fnr family n=1 Ta... 133 4e-30 UniRef50_A8ZKF0 Cyclic nucleotide-binding domain n=2 Tax=Acaryoc... 133 4e-30 UniRef50_C6C034 Transcriptional regulator, Crp/Fnr family n=1 Ta... 133 5e-30 UniRef50_B6IXV7 Transcriptional regulator, Crp n=1 Tax=Rhodospir... 133 5e-30 UniRef50_Q6AL49 Probable transcription regulator (Fnr-like) n=1 ... 133 6e-30 UniRef50_Q67K68 Putative cyclic nucleotide-binding transcription... 133 6e-30 UniRef50_A8MIF1 Transcriptional regulator, Crp/Fnr family n=1 Ta... 133 6e-30 UniRef50_Q5P8X7 Transcriptional regulator, Dnr type n=9 Tax=Bact... 132 8e-30 UniRef50_Q2T0J6 Transcriptional regulator, putative n=61 Tax=Pro... 132 9e-30 UniRef50_Q2W4U7 cAMP-binding protein-catabolite gene activator a... 132 1e-29 UniRef50_B5YAP2 Cyclic nucleotide-binding:Bacterial regulatory p... 131 1e-29 UniRef50_A7NPI1 Transcriptional regulator, Crp/Fnr family n=1 Ta... 131 1e-29 UniRef50_Q023C9 Transcriptional regulator, Crp/Fnr family n=2 Ta... 131 2e-29 UniRef50_Q89HD2 Bll6060 protein n=3 Tax=Bradyrhizobium RepID=Q89... 131 2e-29 UniRef50_B5VZ90 Transcriptional regulator, Crp/Fnr family n=1 Ta... 131 2e-29 UniRef50_Q7MRZ8 DNR n=1 Tax=Wolinella succinogenes RepID=Q7MRZ8_... 131 2e-29 UniRef50_A4J2D4 Transcriptional regulator, Crp/Fnr family n=4 Ta... 130 2e-29 UniRef50_C6VTE5 Transcriptional regulator, Crp/Fnr family n=1 Ta... 130 3e-29 UniRef50_C6XZK0 Response regulator receiver n=3 Tax=Bacteroidete... 130 3e-29 UniRef50_Q0K2Z3 Transcriptional regulator, CRP-family n=3 Tax=Cu... 129 4e-29 UniRef50_P0A2T7 Catabolite gene activator n=270 Tax=Gammaproteob... 129 5e-29 UniRef50_Q15QG5 Transcriptional regulator, Crp/Fnr family n=1 Ta... 129 5e-29 UniRef50_O05689 Catabolite gene activator n=9 Tax=Gammaproteobac... 129 6e-29 UniRef50_B9DSJ9 Crp family regulatory protein n=17 Tax=Firmicute... 129 7e-29 UniRef50_B3QJQ9 Transcriptional regulator, Crp/Fnr family n=2 Ta... 129 7e-29 UniRef50_P29281 Catabolite gene activator n=65 Tax=Gammaproteoba... 129 7e-29 UniRef50_D1B0A9 Cyclic nucleotide-binding protein n=1 Tax=Sulfur... 129 8e-29 UniRef50_D2L3L7 Transcriptional regulator, Crp/Fnr family n=1 Ta... 129 8e-29 UniRef50_A1ZWX5 Transcriptional regulatory protein n=1 Tax=Micro... 128 1e-28 UniRef50_C7RQ03 Transcriptional regulator, Crp/Fnr family n=1 Ta... 128 1e-28 UniRef50_A0P0J2 Putative catabolite gene activator n=2 Tax=Labre... 128 1e-28 UniRef50_C6WZT9 Transcriptional regulator, Crp/Fnr family n=2 Ta... 128 2e-28 UniRef50_UPI0001C34903 Crp/FNR family transcriptional regulator ... 128 2e-28 UniRef50_C8X3D0 Transcriptional regulator, Crp/Fnr family n=1 Ta... 128 2e-28 UniRef50_Q3JC77 Transcriptional regulatory protein, Crp family n... 128 2e-28 UniRef50_Q1GF83 Transcriptional regulator, Crp/Fnr family n=14 T... 127 2e-28 UniRef50_A1SH69 Cyclic nucleotide-binding n=1 Tax=Nocardioides s... 127 2e-28 UniRef50_A4TDK3 Transcriptional regulator, Crp/Fnr family n=8 Ta... 127 3e-28 UniRef50_Q1AV16 Transcriptional regulator, Crp/Fnr family n=1 Ta... 127 3e-28 UniRef50_A5FBG9 Putative transcriptional regulator, Crp/Fnr fami... 127 3e-28 UniRef50_C1XRF8 cAMP-binding protein n=1 Tax=Meiothermus silvanu... 126 4e-28 UniRef50_Q07HN5 Transcriptional regulator, Crp/Fnr family n=1 Ta... 126 4e-28 UniRef50_C6P8N1 Cyclic nucleotide-binding protein n=1 Tax=Thermo... 126 6e-28 UniRef50_C1XIJ9 cAMP-binding protein n=2 Tax=Meiothermus RepID=C... 126 7e-28 UniRef50_B8G111 Transcriptional regulator, Crp/Fnr family n=2 Ta... 126 7e-28 UniRef50_A4X9W3 Transcriptional regulator, Crp/Fnr family n=5 Ta... 125 8e-28 UniRef50_B4RIS9 Transcriptional regulator(CAMP-binding) n=1 Tax=... 125 8e-28 UniRef50_B7H3W0 Cyclic nucleotide-binding domain protein n=14 Ta... 125 8e-28 UniRef50_C6WVL6 Transcriptional regulator, Crp/Fnr family n=1 Ta... 125 9e-28 UniRef50_A4AEI3 Transcriptional regulator, Crp/Fnr family protei... 125 1e-27 UniRef50_C0WNJ4 CRP/FNR family transcriptional regulator n=3 Tax... 125 1e-27 UniRef50_A4CGJ8 Transcriptional regulatory protein n=9 Tax=Flavo... 125 1e-27 UniRef50_B8ID71 Transcriptional regulator, Crp/Fnr family n=11 T... 124 1e-27 UniRef50_C7REI8 Transcriptional regulator, Crp/Fnr family n=4 Ta... 124 1e-27 UniRef50_A3EW66 Putative transcriptional regulator, Crp/Fnr fami... 124 1e-27 UniRef50_Q0EX27 Cyclic nucleotide-binding:Bacterial regulatory p... 124 1e-27 UniRef50_A8MJD1 Cyclic nucleotide-binding protein n=1 Tax=Alkali... 124 2e-27 UniRef50_C5VVR1 Crp family regulatory protein n=5 Tax=Streptococ... 124 3e-27 UniRef50_B8FQL0 Transcriptional regulator, Crp/Fnr family n=3 Ta... 123 3e-27 UniRef50_A2U1H8 Transcriptional regulator, CAP family n=1 Tax=Po... 123 3e-27 UniRef50_D1U5Y5 Transcriptional regulator, Crp/Fnr family n=1 Ta... 123 3e-27 UniRef50_C6PUD3 Cyclic nucleotide-binding protein n=1 Tax=Clostr... 123 3e-27 UniRef50_Q6MK24 Transcriptional regulatory protein n=1 Tax=Bdell... 123 4e-27 UniRef50_C6IXS0 Transcription regulator n=1 Tax=Paenibacillus sp... 123 5e-27 UniRef50_C7VXD9 Transcription regulator n=2 Tax=Enterococcus Rep... 123 5e-27 UniRef50_C5CIJ4 Transcriptional regulator, Crp/Fnr family n=1 Ta... 123 6e-27 UniRef50_Q65IZ1 Putative uncharacterized protein n=1 Tax=Bacillu... 122 7e-27 UniRef50_B7DNP2 Transcriptional regulator, Crp/Fnr family n=1 Ta... 122 7e-27 UniRef50_Q2P9V8 Denitrification regulator T n=1 Tax=Thermus ther... 122 7e-27 UniRef50_D1A2I7 Transcriptional regulator, Crp/Fnr family n=1 Ta... 122 8e-27 UniRef50_B2U6W1 Transcriptional regulator, Crp/Fnr family n=8 Ta... 122 9e-27 UniRef50_B8G0V1 Transcriptional regulator, Crp/Fnr family n=2 Ta... 122 1e-26 UniRef50_B8G033 Transcriptional regulator, Crp/Fnr family n=2 Ta... 121 1e-26 UniRef50_Q11W09 Transcriptional regulator n=2 Tax=Bacteroidetes ... 121 1e-26 UniRef50_C7PGI3 Transcriptional regulator, Crp/Fnr family n=1 Ta... 121 2e-26 UniRef50_A1VYI2 Transcriptional regulator, putative n=15 Tax=Cam... 121 2e-26 UniRef50_Q5SID7 Transcription regulator, Crp family n=3 Tax=Ther... 121 2e-26 UniRef50_UPI0001B46169 Crp/FNR family transcriptional regulator ... 121 2e-26 UniRef50_B0TI91 Transcriptional regulator, crp/fnr family, putat... 121 2e-26 UniRef50_A8F6Y0 Putative transcriptional regulator, Crp/Fnr fami... 121 2e-26 UniRef50_D0LG24 Transcriptional regulator, Crp/Fnr family n=1 Ta... 120 3e-26 UniRef50_C9RRN7 Transcriptional regulator, Crp/Fnr family n=1 Ta... 120 3e-26 UniRef50_C6HW21 Putative transcriptional regulator, Crp/Fnr fami... 120 3e-26 UniRef50_C4XN52 Crp family transcriptional regulator n=2 Tax=Des... 120 3e-26 UniRef50_A7VNU9 Putative uncharacterized protein n=1 Tax=Clostri... 120 3e-26 UniRef50_Q0TRP4 Transcriptional regulator, Crp/Fnr family n=8 Ta... 120 3e-26 UniRef50_UPI0001C31809 transcriptional regulator, Crp/Fnr family... 120 3e-26 UniRef50_A9GWE0 Global nitrogen regulatory protein, CRP family o... 120 4e-26 UniRef50_C5ELS6 Transcriptional regulator n=1 Tax=Clostridiales ... 120 4e-26 UniRef50_Q8KBR5 Transcriptional regulator, Crp/Fnr family n=1 Ta... 119 4e-26 UniRef50_A6L4K6 Transcriptional regulator n=13 Tax=Bacteroides R... 119 4e-26 UniRef50_C8N8N0 Crp/Fnr family transcriptional regulator n=1 Tax... 119 5e-26 UniRef50_D0LJM6 Transcriptional regulator, Crp/Fnr family n=1 Ta... 119 6e-26 UniRef50_A1ZR18 Transcriptional Regulator, Crp/Fnr family, putat... 119 7e-26 UniRef50_B9M2U2 Transcriptional regulator, Crp/Fnr family n=2 Ta... 119 7e-26 UniRef50_B8G2Z1 Transcriptional regulator, Crp/Fnr family n=3 Ta... 119 7e-26 UniRef50_Q46R24 Cyclic nucleotide-binding n=2 Tax=Cupriavidus Re... 119 7e-26 UniRef50_Q1J275 Transcriptional regulator, Crp/Fnr family n=3 Ta... 119 8e-26 UniRef50_Q3K5V6 Cyclic AMP receptor protein,catabolite gene acti... 119 8e-26 UniRef50_A9WEN3 Cyclic nucleotide-binding n=2 Tax=Chloroflexus R... 119 8e-26 UniRef50_A8MIN6 Transcriptional regulator, Crp/Fnr family n=3 Ta... 119 8e-26 UniRef50_C2E977 CRP/FNR family transcriptional regulator n=2 Tax... 119 9e-26 UniRef50_UPI0001BC2D33 transcriptional regulator, Crp/Fnr family... 119 9e-26 UniRef50_A0NV10 Cyclic nucleotide-binding:Bacterial regulatory p... 119 9e-26 UniRef50_C1PC82 Transcriptional regulator, Crp/Fnr family n=1 Ta... 119 9e-26 UniRef50_B1I2T5 Putative transcriptional regulator, Crp/Fnr fami... 118 1e-25 UniRef50_B3QXY7 Transcriptional regulator, Crp/Fnr family n=1 Ta... 118 1e-25 UniRef50_A8M7L2 Transcriptional regulator, Crp/Fnr family n=1 Ta... 118 1e-25 UniRef50_Q5P0W6 Transcriptional regulator, Dnr/Nnr type n=2 Tax=... 118 1e-25 UniRef50_C6BVF1 Transcriptional regulator, Crp/Fnr family n=2 Ta... 118 1e-25 UniRef50_B3PG67 Cyclic AMP receptor protein n=2 Tax=Gammaproteob... 118 1e-25 UniRef50_B8FPV6 Transcriptional regulator, Crp/Fnr family n=2 Ta... 118 1e-25 UniRef50_Q97TL8 CRP (Cyclic AMP receptor protein) regulatory pro... 118 1e-25 UniRef50_A6NUW6 Putative uncharacterized protein n=1 Tax=Bactero... 118 1e-25 UniRef50_C6A9A9 Transcriptional regulator n=20 Tax=Bifidobacteri... 118 2e-25 UniRef50_B6IT06 Transcriptional regulator, Crp n=1 Tax=Rhodospir... 118 2e-25 UniRef50_C4K986 Transcriptional regulator, Crp/Fnr family n=1 Ta... 118 2e-25 UniRef50_Q1AXQ1 Transcriptional regulator, Crp/Fnr family n=1 Ta... 118 2e-25 UniRef50_Q1J0A2 Transcriptional regulator, Crp/Fnr family n=1 Ta... 118 2e-25 UniRef50_B2TMB7 Crp-family transcriptional regulator n=44 Tax=Fi... 117 2e-25 UniRef50_A5G0B9 Transcriptional regulator, Crp/Fnr family n=1 Ta... 117 2e-25 UniRef50_B1N0G1 cAMP-binding protein-catabolite gene activator o... 117 3e-25 UniRef50_C0QS01 Transcriptional regulator, Crp/Fnr family n=1 Ta... 117 3e-25 UniRef50_A9B1R0 Transcriptional regulator, Crp/Fnr family n=1 Ta... 117 3e-25 UniRef50_Q6MNF7 Putative uncharacterized protein n=1 Tax=Bdellov... 117 3e-25 UniRef50_Q2LV90 CAMP-dependent transcriptional regulator n=2 Tax... 117 3e-25 UniRef50_D1TDV0 Putative transcriptional regulator, Crp/Fnr fami... 117 3e-25 UniRef50_C4L2Y7 Transcriptional regulator, Crp/Fnr family n=2 Ta... 117 3e-25 UniRef50_B1MBG6 Putative transcriptional regulator n=1 Tax=Mycob... 117 3e-25 UniRef50_C8SMN6 Transcriptional regulator, Crp/Fnr family n=1 Ta... 117 3e-25 UniRef50_C9LXS7 Cyclic nucleotide binding domain protein n=1 Tax... 116 4e-25 UniRef50_C6PP44 Transcriptional regulator, Crp/Fnr family n=1 Ta... 116 4e-25 UniRef50_Q1IUT3 Transcriptional regulator, Crp/Fnr family n=1 Ta... 116 4e-25 UniRef50_A8EWN6 Putative transcriptional regulator, Crp/Fnr fami... 116 4e-25 UniRef50_Q3ZWV2 Transcriptional regulator cNTP-binding, Crp n=2 ... 116 5e-25 UniRef50_D1C1E8 Transcriptional regulator, Crp/Fnr family n=1 Ta... 116 5e-25 >UniRef50_P0A9F0 Regulatory protein nsr n=59 Tax=Enterobacteriaceae RepID=NSR_ECO57 Length = 219 Score = 290 bits (744), Expect = 2e-77, Method: Composition-based stats. Identities = 219/219 (100%), Positives = 219/219 (100%) Query: 1 MSESAFKDCFLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSL 60 MSESAFKDCFLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSL Sbjct: 1 MSESAFKDCFLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSL 60 Query: 61 IDFFAAPCFIGEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLS 120 IDFFAAPCFIGEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLS Sbjct: 61 IDFFAAPCFIGEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLS 120 Query: 121 HKNYRNIVSLTQNQSFPLVNRLAAFILLSQEGDLYHEKHTQAAEYLGVSYRHLLYVLAQF 180 HKNYRNIVSLTQNQSFPLVNRLAAFILLSQEGDLYHEKHTQAAEYLGVSYRHLLYVLAQF Sbjct: 121 HKNYRNIVSLTQNQSFPLVNRLAAFILLSQEGDLYHEKHTQAAEYLGVSYRHLLYVLAQF 180 Query: 181 IHDGLLIKSKKGYLIKNRKQLSGLALEMDPENKFSGMMQ 219 IHDGLLIKSKKGYLIKNRKQLSGLALEMDPENKFSGMMQ Sbjct: 181 IHDGLLIKSKKGYLIKNRKQLSGLALEMDPENKFSGMMQ 219 >UniRef50_Q814L9 Catabolite gene activator n=33 Tax=Bacillus RepID=Q814L9_BACCR Length = 223 Score = 238 bits (608), Expect = 1e-61, Method: Composition-based stats. Identities = 89/209 (42%), Positives = 125/209 (59%) Query: 1 MSESAFKDCFLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSL 60 M F F V L F ++ I EG +L+YL G+A++Y + NG+VSL Sbjct: 14 MQIHQFHTLFSFHVLPYVELHSFQTKEMICSEGNTLPYLYYLISGKAKIYMSHKNGKVSL 73 Query: 61 IDFFAAPCFIGEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLS 120 I+F AP FIGE+ LI ++ ++V+ +E+C CLALP+K + LLL D FL+ LC + Sbjct: 74 INFIQAPSFIGELGLIGVENITKSVEVLEDCVCLALPLKDCQQLLLQDATFLQHLCKFIG 133 Query: 121 HKNYRNIVSLTQNQSFPLVNRLAAFILLSQEGDLYHEKHTQAAEYLGVSYRHLLYVLAQF 180 K + +N S+P NRLAAFILL+++ + Y EKHT+A+EYL VSYRHLLYVL +F Sbjct: 134 EKTITRTENYAKNYSYPFENRLAAFILLTEQNNCYIEKHTEASEYLNVSYRHLLYVLNRF 193 Query: 181 IHDGLLIKSKKGYLIKNRKQLSGLALEMD 209 L K + Y I++R L LA E+ Sbjct: 194 CQQNYLRKEGRTYYIQDRNTLEKLADELK 222 >UniRef50_A0RLJ1 Cyclic nucleotide-binding domain protein n=37 Tax=Bacillus cereus group RepID=A0RLJ1_BACAH Length = 223 Score = 238 bits (608), Expect = 1e-61, Method: Composition-based stats. Identities = 95/209 (45%), Positives = 125/209 (59%) Query: 1 MSESAFKDCFLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSL 60 + F F D+ L F ++ I +EG +L+YL G+A++Y + NGRVSL Sbjct: 14 IQTYNFHTFFSFDILPYAELHSFQKKERICREGVDVPYLYYLISGKAKIYMSHKNGRVSL 73 Query: 61 IDFFAAPCFIGEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLS 120 I+F AP FIGE+ LI + + V+ IEEC CL LP+K R LLL D FL+KLC + Sbjct: 74 INFIQAPSFIGELGLIGVESVTKTVEVIEECMCLVLPLKDCRHLLLQDATFLQKLCKFIG 133 Query: 121 HKNYRNIVSLTQNQSFPLVNRLAAFILLSQEGDLYHEKHTQAAEYLGVSYRHLLYVLAQF 180 K S +N S+P NRLAAFILL+++ + Y EKHT+A+EYL VSYRHLLYVL QF Sbjct: 134 EKTITRTESYAKNNSYPFENRLAAFILLTEQNNSYTEKHTEASEYLNVSYRHLLYVLNQF 193 Query: 181 IHDGLLIKSKKGYLIKNRKQLSGLALEMD 209 L K + Y I +R QL LA E+ Sbjct: 194 CQQHYLKKDGRTYYIHDRIQLEKLADELK 222 >UniRef50_D1ART3 Transcriptional regulator, Crp/Fnr family n=1 Tax=Sebaldella termitidis ATCC 33386 RepID=D1ART3_SEBTE Length = 227 Score = 235 bits (601), Expect = 6e-61, Method: Composition-based stats. Identities = 111/211 (52%), Positives = 146/211 (69%) Query: 1 MSESAFKDCFLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSL 60 + S F + F + +L F +YI++E PS LF+LT GRA+LY TLANG+++L Sbjct: 14 IQRSGFMNFFSFPADSFVKLVTFSPNEYIIEESLLPSHLFFLTSGRAKLYTTLANGKIAL 73 Query: 61 IDFFAAPCFIGEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLS 120 IDFF APCF+GE+EL+ + +VQAIE C CLALP+ R +LL D +FLRK+C+ L Sbjct: 74 IDFFRAPCFVGEMELVGHTQDICSVQAIEPCVCLALPILQCREMLLTDPVFLRKICLYLG 133 Query: 121 HKNYRNIVSLTQNQSFPLVNRLAAFILLSQEGDLYHEKHTQAAEYLGVSYRHLLYVLAQF 180 KN RNI SLT+NQ++ L NRLA FILLS D+Y EKH+ AA+YLGVSYRHLLYV+AQF Sbjct: 134 GKNARNIRSLTKNQAYTLENRLAGFILLSTATDIYKEKHSHAADYLGVSYRHLLYVMAQF 193 Query: 181 IHDGLLIKSKKGYLIKNRKQLSGLALEMDPE 211 I G L K + Y I +++ L LA +DP+ Sbjct: 194 IEKGFLKKENRIYRIADKQALLELAHVVDPD 224 >UniRef50_Q03NI3 Crp-like transcriptional regulator n=1 Tax=Lactobacillus brevis ATCC 367 RepID=Q03NI3_LACBA Length = 226 Score = 233 bits (596), Expect = 3e-60, Method: Composition-based stats. Identities = 109/211 (51%), Positives = 147/211 (69%) Query: 3 ESAFKDCFLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLID 62 S + F TD++A T+L F A+ +IV+E P +++YL +GRA+LY +ANG+V+LID Sbjct: 16 NSHYLAQFSTDITAQTQLIKFPAQSFIVKESATPEYIYYLVKGRAKLYDVMANGKVTLID 75 Query: 63 FFAAPCFIGEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHK 122 FF PCFIGE+ELI+ +VQAIE+CWCLA+ ++ + LLND +FL+ +C+ L+ K Sbjct: 76 FFTPPCFIGEMELINPASTLYSVQAIEDCWCLAVSIRDNQSQLLNDPVFLKHVCIYLAQK 135 Query: 123 NYRNIVSLTQNQSFPLVNRLAAFILLSQEGDLYHEKHTQAAEYLGVSYRHLLYVLAQFIH 182 N RNI + +QNQSF L RLAAFILL+ Y EKHTQ A YLGVSYRHLLYVLAQF+ Sbjct: 136 NTRNIETASQNQSFSLAERLAAFILLTTYHHHYAEKHTQVAAYLGVSYRHLLYVLAQFVK 195 Query: 183 DGLLIKSKKGYLIKNRKQLSGLALEMDPENK 213 G L+K K GYL+ N L L+ ++ N+ Sbjct: 196 AGYLVKDKPGYLVTNGTALQELSRDVTNSNR 226 >UniRef50_A3IBY0 DNA-binding transcriptional activator of stationary phase nitrogen survival n=3 Tax=Firmicutes RepID=A3IBY0_9BACI Length = 220 Score = 231 bits (590), Expect = 1e-59, Method: Composition-based stats. Identities = 89/208 (42%), Positives = 128/208 (61%), Gaps = 1/208 (0%) Query: 1 MSESAFKDCFLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSL 60 + + D F D+ + F ++I QEG P L+Y+ G+A+LY T NG+VSL Sbjct: 13 LEKYPIHDFFSFDIDPYLEVCEFDKGEWIFQEGSFPETLYYMIEGKAKLYMTHKNGKVSL 72 Query: 61 IDFFAAPCFIGEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLS 120 I++ P F+GEIEL+++ + +Q + + C ++ + + LL D LFLR+LCV L Sbjct: 73 IEYLEGPLFMGEIELLNEARYTKGIQTVTKTICYSI-TQSCKEKLLADVLFLRRLCVFLG 131 Query: 121 HKNYRNIVSLTQNQSFPLVNRLAAFILLSQEGDLYHEKHTQAAEYLGVSYRHLLYVLAQF 180 K + TQNQ++P +RLAAFI LS + +Y EKHT+ EYLGVSYRHLLYVLAQF Sbjct: 132 EKATKMTSKYTQNQAYPFESRLAAFIQLSADQGVYKEKHTEICEYLGVSYRHLLYVLAQF 191 Query: 181 IHDGLLIKSKKGYLIKNRKQLSGLALEM 208 + +L K K GY I + K+L+ LA E+ Sbjct: 192 CEEKILEKRKTGYHIIDEKRLAQLAQEI 219 >UniRef50_C6LEY7 Regulatory protein nsr n=1 Tax=Bryantella formatexigens DSM 14469 RepID=C6LEY7_9FIRM Length = 229 Score = 231 bits (590), Expect = 1e-59, Method: Composition-based stats. Identities = 92/208 (44%), Positives = 130/208 (62%) Query: 5 AFKDCFLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDFF 64 D F D+ T + F + + ++QEG+ P +L+YLT GRA+L+ + NGR+SLI+F Sbjct: 18 PLSDFFSFDIRPYTSIIRFDSEENLLQEGETPRFLYYLTEGRAKLFLSHGNGRISLINFL 77 Query: 65 AAPCFIGEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKNY 124 APCFIGE+EL V AI C C A+ ++ + +L+DT FLR LC+ LS K Sbjct: 78 DAPCFIGEMELFGAQKTANGVTAITPCICYAIRIRDCKERILSDTKFLRCLCMLLSRKAV 137 Query: 125 RNIVSLTQNQSFPLVNRLAAFILLSQEGDLYHEKHTQAAEYLGVSYRHLLYVLAQFIHDG 184 N + ++NQS+ L RLA FILL+ +Y EKHT+ +E+LGV+YRHLLYVLA F+ G Sbjct: 138 GNTCNYSKNQSYSLEVRLADFILLTSCNRMYREKHTEVSEFLGVTYRHLLYVLADFVKRG 197 Query: 185 LLIKSKKGYLIKNRKQLSGLALEMDPEN 212 L K+ +GYLI++ L LA + N Sbjct: 198 YLKKTDRGYLIQDMDALRKLAENITGGN 225 >UniRef50_A0RGL8 Cyclic nucleotide-binding domain protein n=90 Tax=Firmicutes RepID=A0RGL8_BACAH Length = 243 Score = 217 bits (554), Expect = 2e-55, Method: Composition-based stats. Identities = 63/215 (29%), Positives = 110/215 (51%), Gaps = 7/215 (3%) Query: 1 MSESAFKDCFLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSL 60 M ++ F D++ L F ++I +E ++ +L++ G+A+ + TL+NG+ L Sbjct: 27 MKQNNIDSFFSNDMNPYMELIFFKKNEFICRENEEIDYLYFFVEGKAKAFNTLSNGKSVL 86 Query: 61 IDFFAAPCFIGEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLS 120 + F+ + +G++ELI VQ + + +C+ LP+ R L +D FLR +C +L+ Sbjct: 87 LCFYDSLQLLGDVELIHSQKTASNVQVMADSYCVGLPLGKVRNQLFHDAKFLRCICGSLA 146 Query: 121 HKNYRNIVSLTQNQSFPLVNRLAAFIL-------LSQEGDLYHEKHTQAAEYLGVSYRHL 173 HK R + T N +PL NRLA+++L ++ T+ AE LG SYRHL Sbjct: 147 HKLNRLSKNSTINLLYPLENRLASYMLAAGERAVQHGNRIVFSGNLTETAELLGTSYRHL 206 Query: 174 LYVLAQFIHDGLLIKSKKGYLIKNRKQLSGLALEM 208 L L F ++ K+ + + N L LA ++ Sbjct: 207 LRTLNIFCDKEIIKKNNGCFEVVNVDVLRELAADV 241 >UniRef50_Q2BCV7 Cyclic nucleotide-binding domain protein n=2 Tax=Bacillus RepID=Q2BCV7_9BACI Length = 231 Score = 216 bits (550), Expect = 5e-55, Method: Composition-based stats. Identities = 84/215 (39%), Positives = 127/215 (59%) Query: 1 MSESAFKDCFLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSL 60 + + + F + + + ++I++EG +P +LFY+ G+A++Y T NG+VSL Sbjct: 13 LEKHSIAHLFSFPIEEGIEVHEYQRDEWIIREGMRPDYLFYVIEGKAKIYITYQNGKVSL 72 Query: 61 IDFFAAPCFIGEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLS 120 I+F +IGE+EL+ + + + +QA C A+P+ YR +L DTLFLR+L LS Sbjct: 73 INFINTHDYIGEMELLHEVYYTKGIQASTRTICFAIPLTQYRNQMLEDTLFLRELTKFLS 132 Query: 121 HKNYRNIVSLTQNQSFPLVNRLAAFILLSQEGDLYHEKHTQAAEYLGVSYRHLLYVLAQF 180 K +Q+ +FPL NRLA FIL + +GDLY EKH ++LGVSYRHLL+VLAQF Sbjct: 133 LKATNMAAKYSQSLAFPLENRLADFILQTADGDLYKEKHVTVCDFLGVSYRHLLHVLAQF 192 Query: 181 IHDGLLIKSKKGYLIKNRKQLSGLALEMDPENKFS 215 G L K YL+++R +L LA + + S Sbjct: 193 CEQGYLRKEGMRYLVESRGRLEELAGVLRNQGDGS 227 >UniRef50_B0ABB5 Putative uncharacterized protein n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0ABB5_9CLOT Length = 238 Score = 215 bits (549), Expect = 7e-55, Method: Composition-based stats. Identities = 67/210 (31%), Positives = 115/210 (54%), Gaps = 2/210 (0%) Query: 1 MSESAFKDCFLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSL 60 +++ + F +D+ + HF ++I G++ +L+ G++++Y T NG+ L Sbjct: 27 INKYNINEIFSSDIYPYMEIHHFKKNEHICLSGEELKYLYLFVEGKSKVYITTPNGKSLL 86 Query: 61 IDFFAAPCFIGEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLS 120 + F++ +GEIEL++K +QAI +C C+A+P K L D+ FL + L+ Sbjct: 87 VRFYSPVQIVGEIELLNKIEFQCNIQAIRDCICIAVPRKIIEEKYLKDSKFLHYISTHLA 146 Query: 121 HKNYRNIVSLTQNQSFPLVNRLAAFILLS--QEGDLYHEKHTQAAEYLGVSYRHLLYVLA 178 K VS + N +PL NRLA++IL S E E TQ AE+LG SYRHLL V+ Sbjct: 147 LKLASLSVSNSVNILYPLENRLASYILASYTSEDSNNTENLTQIAEFLGTSYRHLLRVVK 206 Query: 179 QFIHDGLLIKSKKGYLIKNRKQLSGLALEM 208 +F + ++ + K +I ++ +L LA ++ Sbjct: 207 EFELEKIIKRDNKKLVILDKDKLEDLAGDL 236 >UniRef50_A6LU88 Cyclic nucleotide-binding protein n=3 Tax=Clostridium RepID=A6LU88_CLOB8 Length = 230 Score = 209 bits (533), Expect = 5e-53, Method: Composition-based stats. Identities = 63/215 (29%), Positives = 116/215 (53%), Gaps = 7/215 (3%) Query: 1 MSESAFKDCFLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSL 60 ++++ ++ F D+ L+ F +YI +E + +++L G+A++ L NG+ L Sbjct: 14 INKNKLENLFSEDMGRYMELYMFNKNEYICREEEILENMYFLVEGKAKVSKHLENGKSLL 73 Query: 61 IDFFAAPCFIGEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLS 120 I F++ IG+ E + + +VQAI++ +C+ + R +L+ND FL LC LS Sbjct: 74 ISFYSPITIIGDAEFVRNNPTDCSVQAIKDTYCIGIRFDIVRKILINDCKFLVNLCSYLS 133 Query: 121 HKNYRNIVSLTQNQSFPLVNRLAAFILLSQEGD-------LYHEKHTQAAEYLGVSYRHL 173 K + + + N +PL NRLA++I+ E + ++ E + + AE LG SYRHL Sbjct: 134 EKLTNSSTNTSINLLYPLENRLASYIIAFSEIENSNTRKIIFRENYIEIAELLGTSYRHL 193 Query: 174 LYVLAQFIHDGLLIKSKKGYLIKNRKQLSGLALEM 208 L + +G+L ++ K Y I++ +L LA ++ Sbjct: 194 SRTLNKLCLEGILKRNNKEYFIQDYDKLLYLAGDL 228 >UniRef50_Q0TU94 Cyclic nucleotide-binding domain protein n=8 Tax=Clostridium perfringens RepID=Q0TU94_CLOP1 Length = 223 Score = 202 bits (514), Expect = 8e-51, Method: Composition-based stats. Identities = 54/210 (25%), Positives = 115/210 (54%), Gaps = 1/210 (0%) Query: 1 MSESAFKDCFLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSL 60 +++ F ++ L F ++I ++ ++L++ G+A++Y TL NG+ L Sbjct: 14 INKYELNSIFSQEIMPFLELHMFKKNEHICFMNEELNYLYFFVHGKAKVYKTLPNGKSLL 73 Query: 61 IDFFAAPCFIGEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLS 120 ++F+ IG++ELI K V+A++ C+A+P++ + L D FL + LS Sbjct: 74 LEFYEPVQLIGDLELISKIKANCNVKALKSSLCIAIPIQAVNSIALKDLNFLMYITKNLS 133 Query: 121 HKNYRNIVSLTQNQSFPLVNRLAAFIL-LSQEGDLYHEKHTQAAEYLGVSYRHLLYVLAQ 179 +K + V+ + ++PL +LA+++L ++ + + ++ A+ LG SYRHL VL + Sbjct: 134 NKLAKCSVTSSITITYPLETKLASYLLAMNSNNIIMIDNYSNLADLLGTSYRHLNRVLNK 193 Query: 180 FIHDGLLIKSKKGYLIKNRKQLSGLALEMD 209 + G+++K K I N+++L + ++++ Sbjct: 194 LVEKGIILKDKNEIKILNKEELENICVDLN 223 >UniRef50_C0ZJL4 Probable transcriptional regulator n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0ZJL4_BREBN Length = 232 Score = 201 bits (513), Expect = 1e-50, Method: Composition-based stats. Identities = 54/214 (25%), Positives = 102/214 (47%), Gaps = 8/214 (3%) Query: 1 MSESAFKDCFLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSL 60 + S D F + RL+ D + +G Q ++++ +G+ +++ TL NG+ L Sbjct: 14 VQNSPLPDIFDAVTLHEMRLYQAEKGDILCSKGDQLHHMYFILKGKIKIFTTLPNGKSLL 73 Query: 61 IDFFAAPCFIGEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLS 120 + F IG++E + + V+ + ++LP + N FL+ + +S Sbjct: 74 LRFNNPLAIIGDVEYVTQCEVRNTVEFVHRSLVVSLPFHVLQEKYQNHPPFLQFILHKIS 133 Query: 121 HKNYRNIVSLTQNQSFPLVNRLAAFIL--------LSQEGDLYHEKHTQAAEYLGVSYRH 172 HK Y + S + N +P+ NR A+++L + +L K T+ AE LG SYRH Sbjct: 134 HKLYTSSNSTSLNLLYPVENRFASYLLSTLSSDTGSTASEELKTAKLTEVAELLGTSYRH 193 Query: 173 LLYVLAQFIHDGLLIKSKKGYLIKNRKQLSGLAL 206 L V+ ++ + K +IK+R+++S L+ Sbjct: 194 LNRVIRNLCAASVIERKKSALIIKDREKISELSS 227 >UniRef50_C0D933 Putative uncharacterized protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0D933_9CLOT Length = 232 Score = 201 bits (511), Expect = 2e-50, Method: Composition-based stats. Identities = 69/216 (31%), Positives = 111/216 (51%) Query: 1 MSESAFKDCFLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSL 60 + E+ F F D+ R+ + +YI++ Q + + YL RG A+LY NGR SL Sbjct: 16 LKENGFLLHFSFDIRPYLRVTEYEKGEYIIRNTDQLTRILYLVRGTAKLYGFHKNGRQSL 75 Query: 61 IDFFAAPCFIGEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLS 120 I+FF P F G EL +++ P + A +C + + + R LL D FLR C Sbjct: 76 INFFTPPSFFGVPELFEENKRPFPIVAQTKCRFIEVDTRGCRAALLQDAQFLRFCCSMAL 135 Query: 121 HKNYRNIVSLTQNQSFPLVNRLAAFILLSQEGDLYHEKHTQAAEYLGVSYRHLLYVLAQF 180 +N ++P N LAA +LL Q + K+T+ AEYL +SYRHL+ ++++ Sbjct: 136 KQNVAQNHRYMCLTAYPSRNNLAACLLLLQNDGVLSVKYTEIAEYLTISYRHLMQLISEL 195 Query: 181 IHDGLLIKSKKGYLIKNRKQLSGLALEMDPENKFSG 216 + +L + KG I + +Q+ LA EM ++ +G Sbjct: 196 CEERILERVPKGLRILDWEQVRALADEMREDDHGAG 231 >UniRef50_D0AGV6 Predicted protein n=2 Tax=Enterococcus RepID=D0AGV6_ENTFC Length = 227 Score = 200 bits (509), Expect = 3e-50, Method: Composition-based stats. Identities = 57/209 (27%), Positives = 107/209 (51%), Gaps = 1/209 (0%) Query: 1 MSESAFKDCFLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSL 60 + + +D +D+ A L F ++++Q G+ +L++L G +Y+ ++ + Sbjct: 14 VEKHNLQDYMDSDILAMASLLFFEKEEHLIQTGKTSDYLYFLVDGTVMVYSYSSDTQNIC 73 Query: 61 IDFFAAPCFIGEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLS 120 ID+ +GE + + +V+A+ +C C+++P+ YR L D FL+ +C LS Sbjct: 74 IDYAKPATPLGEASSLWELSPKSSVKAVTKCICISIPLNQYRTQLQKDVRFLQNICQLLS 133 Query: 121 HKNYRNIVSLTQNQSFPLVNRLAAFILLSQEGDLYHEKHTQAAEYLGVSYRHLLYVLAQF 180 ++ + ++L + + P+ RLA FIL E + + + T A L VSYRHLL + F Sbjct: 134 YRL-NSGINLANSLTEPVETRLAKFILTHHENERFSFRLTTCASILNVSYRHLLRTITNF 192 Query: 181 IHDGLLIKSKKGYLIKNRKQLSGLALEMD 209 + ++ K K YLI + + L LA + Sbjct: 193 REENIIEKKKNYYLIHDIEALEDLAENIS 221 >UniRef50_C6D048 Transcriptional regulator, Crp/Fnr family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D048_PAESJ Length = 234 Score = 193 bits (492), Expect = 2e-48, Method: Composition-based stats. Identities = 57/208 (27%), Positives = 104/208 (50%), Gaps = 4/208 (1%) Query: 1 MSESAFKDCFLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSL 60 +++ A D F + + L+ F D + ++G+ P ++F+L RG+ ++Y T A+G+ L Sbjct: 14 LAQYALDDVFPSSLRQHLTLYRFEPDDTLCKQGEIPEYIFFLMRGKVKVYTTSADGKTLL 73 Query: 61 IDFFAAPCFIGEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLS 120 I+F + +GEIE +++ V A+ +A K + L + FL+ + ++ Sbjct: 74 INFTSPLGVLGEIECLNELENLNTVSAVTPVETVAF-HKRWLKLYREEVPFLQFMLHLVT 132 Query: 121 HKNYRNIVSLTQNQSFPLVNRLAAFILLSQEGD---LYHEKHTQAAEYLGVSYRHLLYVL 177 K Y VSL+ N +P+ RLA+++L D + A +G SYRHL ++ Sbjct: 133 EKFYNKSVSLSFNLLYPVEVRLASYLLSVTTPDDARVSTAHLKDMANLIGTSYRHLNRII 192 Query: 178 AQFIHDGLLIKSKKGYLIKNRKQLSGLA 205 F L+ +S+ ++KNR L A Sbjct: 193 LNFTSANLIERSRGTLVVKNRMGLEEAA 220 >UniRef50_B1YHB5 Cyclic nucleotide-binding protein n=2 Tax=Exiguobacterium RepID=B1YHB5_EXIS2 Length = 222 Score = 190 bits (484), Expect = 2e-47, Method: Composition-based stats. Identities = 46/205 (22%), Positives = 91/205 (44%), Gaps = 2/205 (0%) Query: 1 MSESAFKDCFLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSL 60 + D F + + F A D++ ++G ++ L G+ ++ A G+ + Sbjct: 10 LDRFQLTDVFAGGLREHLQPVAFQAGDWLCRQGDAADRMYLLLEGKLKITHMSATGKRLV 69 Query: 61 IDFFAAPCFIGEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLS 120 + F +G+IE + + V+A+ +++ ++ LR L T++ Sbjct: 70 LSFKHPFDLVGDIEYVRRTPLMNTVEAVTPVKAVSISYAALEQKGADNPALLRFLLETIT 129 Query: 121 HKNYRNIVSLTQNQSFPLVNRLAAFIL--LSQEGDLYHEKHTQAAEYLGVSYRHLLYVLA 178 K S++ N +P+ RLA+++L + L AA+ +G SYRHL VL Sbjct: 130 MKFELKSHSMSFNLLYPVEVRLASYLLSMTPETPTLPVSDLVDAADLIGTSYRHLNRVLR 189 Query: 179 QFIHDGLLIKSKKGYLIKNRKQLSG 203 QF D L+ ++ + I +R+ L+ Sbjct: 190 QFSQDNLIERTNRTITIIDREGLTE 214 >UniRef50_C9A466 Cyclic nucleotide-binding domain-containing protein n=4 Tax=Enterococcus RepID=C9A466_ENTGA Length = 223 Score = 190 bits (484), Expect = 3e-47, Method: Composition-based stats. Identities = 56/206 (27%), Positives = 102/206 (49%), Gaps = 1/206 (0%) Query: 6 FKDCFLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDFFA 65 ++ +S L F ++++Q G +L++L G +Y+ ++ + ID+ Sbjct: 19 LQNYLDAALSDMAVLHSFDKDEHLIQTGTVSDYLYFLVEGTVMVYSYPSDTQNIFIDYAK 78 Query: 66 APCFIGEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKNYR 125 +GE + + +V+A+ C C+ + + YR +L D FL+ +C LS + Sbjct: 79 PATLLGEASSLWELLPKSSVKAVTPCICVCISLNRYRSVLQQDVRFLQNICQLLSSRL-N 137 Query: 126 NIVSLTQNQSFPLVNRLAAFILLSQEGDLYHEKHTQAAEYLGVSYRHLLYVLAQFIHDGL 185 + ++L + + P+ RLA FILL +E ++ + T A L VSYRHLL + F + + Sbjct: 138 SGINLANSLTEPVETRLAKFILLHEEKGVFTHQLTTCAAVLNVSYRHLLRTITNFRENRI 197 Query: 186 LIKSKKGYLIKNRKQLSGLALEMDPE 211 L K K Y+I++R L LA + Sbjct: 198 LEKQKSKYVIRDRSALEVLAENLSHS 223 >UniRef50_UPI00018512E8 cyclic nucleotide-binding protein n=1 Tax=Bacillus coahuilensis m4-4 RepID=UPI00018512E8 Length = 231 Score = 189 bits (481), Expect = 5e-47, Method: Composition-based stats. Identities = 56/213 (26%), Positives = 95/213 (44%), Gaps = 7/213 (3%) Query: 1 MSESAFKDCFLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSL 60 + E F + + + +++ G+ L++L G+ ++Y L NGR L Sbjct: 14 LKEYELDKLFPSPNYEEFSIHTVNKGEHLCSIGEDIHHLYFLVSGKLKVYTNLPNGRSLL 73 Query: 61 IDFFAAPCFIGEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLS 120 I F IGE+EL+ K+ +V+ ++E LA+ + FLR L LS Sbjct: 74 IRFNQPLSIIGELELVTKEPAKHSVETVQESVLLAVQYDYIYKHHYQHPAFLRYLLHHLS 133 Query: 121 HKNYRNIVSLTQNQSFPLVNRLAAFILL---SQEGDLYHE----KHTQAAEYLGVSYRHL 173 ++ Y S + N + NR A++++ +EG L E T+ AE LG SYRHL Sbjct: 134 YRLYTASNSSSLNLLTTVENRFASYLMSIYNPEEGSLVEEIKTANLTETAELLGTSYRHL 193 Query: 174 LYVLAQFIHDGLLIKSKKGYLIKNRKQLSGLAL 206 V+ + ++ + K I + +L LA Sbjct: 194 NRVIKELCEKKMIQRKKGVVSILDPVRLETLAD 226 >UniRef50_A8FDX9 Possible Crp family transcriptional regulator n=5 Tax=Bacillales RepID=A8FDX9_BACP2 Length = 226 Score = 189 bits (480), Expect = 7e-47, Method: Composition-based stats. Identities = 47/208 (22%), Positives = 94/208 (45%), Gaps = 2/208 (0%) Query: 1 MSESAFKDCFLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSL 60 M + F + + L + + + +G + +L+ L +G+ +++ T G+ + Sbjct: 14 MKAHQLESVFHQKLMSHVSLCRYEQGELVCSKGDKREYLYLLVKGKLKIFTTTKEGKTFI 73 Query: 61 IDFFAAPCFIGEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLS 120 + F IG+IE + + V+A+ E L + + +D L L ++ Sbjct: 74 LSFKHPLEAIGDIEYVQQTDMVNTVEAVTEVHMLRVSHQALMRHAKDDPRVLNFLLKGIT 133 Query: 121 HKNYRNIVSLTQNQSFPLVNRLAAFILL--SQEGDLYHEKHTQAAEYLGVSYRHLLYVLA 178 +K Y L+ + +P+ RLA+++L + + + T AA +G SYRH+ V+ Sbjct: 134 NKFYTKSNDLSFHLLYPVEVRLASYLLSVVTSDESASALRLTDAASLIGTSYRHINRVIQ 193 Query: 179 QFIHDGLLIKSKKGYLIKNRKQLSGLAL 206 QF GL+ + + I +RK L +A Sbjct: 194 QFCEKGLIERRRGNITISDRKGLLEIAE 221 >UniRef50_C3RH00 Cyclic nucleotide-binding protein n=2 Tax=Bacteria RepID=C3RH00_9MOLU Length = 219 Score = 188 bits (479), Expect = 8e-47, Method: Composition-based stats. Identities = 59/203 (29%), Positives = 97/203 (47%), Gaps = 1/203 (0%) Query: 7 KDCFLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDFFAA 66 + D L F ++++ +GQ +L+ L GR + T ANG L F Sbjct: 14 EQMMSDDNYQYLELCEFSKAEHLLHQGQILEYLYILVSGRIKSCRTTANGTTVLSAFSNP 73 Query: 67 PCFIGEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKNYRN 126 GE+E ++ V A++ C + + Y +LL+D +F+R L TLS+ Y Sbjct: 74 ITVTGEVEFLNHHEVTNDVYALKNTVCFRISVAQYEDILLHDLIFMRYLARTLSNLLYHA 133 Query: 127 IVSLTQNQSFPLVNRLAAFILLSQEGDLYHEKHTQAAEYLGVSYRHLLYVLAQFIHDGLL 186 + + ++P+ NRLA++++ S + + + Q AE +G SYR L VL F G L Sbjct: 134 NHNTAISINYPVENRLASYLISSAQQLIIKDNFVQVAEMIGCSYRQLQRVLNDFCQCGYL 193 Query: 187 IKSKKG-YLIKNRKQLSGLALEM 208 K K+G YLI + L L ++ Sbjct: 194 CKVKRGNYLITDESALKALGQDL 216 >UniRef50_C9A6F2 Cyclic nucleotide-binding domain-containing protein n=3 Tax=Enterococcus casseliflavus RepID=C9A6F2_ENTCA Length = 223 Score = 188 bits (478), Expect = 1e-46, Method: Composition-based stats. Identities = 66/185 (35%), Positives = 98/185 (52%) Query: 11 LTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDFFAAPCFI 70 ++ + L+ F R+ I +E S F L G+A++ T NG+ +L+ F I Sbjct: 24 PEEILQQSALWTFDHREAIQKETVPMSVFFVLLTGKAKIIQTQENGKRALLQFLHPGDCI 83 Query: 71 GEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKNYRNIVSL 130 G++ LI + P+ V AI E CL +PM+ L+ D F++ L T+ K + Sbjct: 84 GDLTLIGAETVPKTVVAIGETTCLGIPMQAAAHGLMQDLAFVQTLGKTIGEKLLLRMDHF 143 Query: 131 TQNQSFPLVNRLAAFILLSQEGDLYHEKHTQAAEYLGVSYRHLLYVLAQFIHDGLLIKSK 190 + NQ++PL RLA +L + DL+ EK T+ AEYLGVSYRHL Y L F L+ K+ Sbjct: 144 SVNQTYPLAWRLAHLLLEASIDDLFQEKLTETAEYLGVSYRHLTYTLKDFKTQKLVTKTA 203 Query: 191 KGYLI 195 GY I Sbjct: 204 DGYRI 208 >UniRef50_A9KNS6 Cyclic nucleotide-binding protein n=2 Tax=Clostridiales RepID=A9KNS6_CLOPH Length = 224 Score = 187 bits (476), Expect = 2e-46, Method: Composition-based stats. Identities = 52/186 (27%), Positives = 98/186 (52%), Gaps = 1/186 (0%) Query: 21 FHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDFFAAPCFIGEIELIDKDH 80 F A + I+ EG +L ++ G+ ++ +T NG+ ++ ++ + IG++EL+ + Sbjct: 30 LRFEAGENILHEGMPIMYLMFVVTGKVKICSTAKNGKDLVLCYYISDGIIGDLELMTNTY 89 Query: 81 -EPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKNYRNIVSLTQNQSFPLV 139 ++ AI + C+ALP + Y L N+ FL+++ LS+K R + Sbjct: 90 DATASIIAITDFECIALPYQKYAIDLKNNLAFLKRIGSELSNKLLRISKNYVFTTLHSGE 149 Query: 140 NRLAAFILLSQEGDLYHEKHTQAAEYLGVSYRHLLYVLAQFIHDGLLIKSKKGYLIKNRK 199 RL ++IL + ++++ T + +G+SYRH+ +L Q DGLL K GY+I +R+ Sbjct: 150 ERLCSYILQASHNGIFNDILTDVSCSIGMSYRHMFRLLNQLCTDGLLDKRDNGYIIVDRE 209 Query: 200 QLSGLA 205 +L A Sbjct: 210 ELLRRA 215 >UniRef50_B9DTE0 Crp family regulatory protein n=2 Tax=Streptococcus RepID=B9DTE0_STRU0 Length = 222 Score = 184 bits (467), Expect = 2e-45, Method: Composition-based stats. Identities = 57/208 (27%), Positives = 99/208 (47%), Gaps = 2/208 (0%) Query: 1 MSESAFKDCFLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSL 60 + + F + V D L F + I + Q ++ Y G ++ L NG+ + Sbjct: 14 LKKHGLSHFFPSTVQKDLHLLLFQKNEAICLQDQDLDFIGYALEGAVKIVRRLPNGKEHV 73 Query: 61 IDFFAAPCFIGEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLS 120 ++ A P IG+IEL+ +V A++ + + LP++ + LL D FL ++ L+ Sbjct: 74 LETHARPSLIGDIELLTNQKAVTSVIALKSTYFIYLPLRD-KKKLLKDPDFLYQIGQVLA 132 Query: 121 HKNYRNIVSLTQNQSFPLVNRLAAFILLSQEGDLYHEKHTQAAEYLGVSYRHLLYVLAQF 180 + Y+ V TQN + + RLA IL + ++ + + A+ G SYRHL V+ Q Sbjct: 133 NNFYQQNVKSTQNMGYTVKERLARHILDQENNGVFGLELSLLADSFGTSYRHLHRVIQQL 192 Query: 181 IHDGLLIKSK-KGYLIKNRKQLSGLALE 207 I ++ + K Y I + K L LAL+ Sbjct: 193 ISQNIIERQAFKSYCITDFKSLEALALK 220 >UniRef50_Q03MP5 Crp-like transcriptional regulator n=4 Tax=Streptococcus RepID=Q03MP5_STRTD Length = 212 Score = 182 bits (462), Expect = 9e-45, Method: Composition-based stats. Identities = 57/201 (28%), Positives = 100/201 (49%), Gaps = 2/201 (0%) Query: 6 FKDCFLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDFFA 65 + F + + F +YI +GQ + L Y+ GR ++ +L+NG+ +++ Sbjct: 10 LEQVFSAPYLSQLQKVTFQKGNYICTQGQDITELTYILSGRVKIVRSLSNGKEHILEMPQ 69 Query: 66 APCFIGEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKNYR 125 P +G++EL+ +V A+EE + LP+ + + LL D +FL + L+ +R Sbjct: 70 QPQLLGDVELMTNQLAGSSVIALEEVQTVQLPLNN-KEALLKDPIFLYHIGRNLAMALHR 128 Query: 126 NIVSLTQNQSFPLVNRLAAFILLSQEGDLYHEKHTQAAEYLGVSYRHLLYVLAQFIHDGL 185 ++ + N S+ + RLA IL +E D++ + + G SYRH+ V+ QFI G+ Sbjct: 129 QGITASTNASYFVKERLATHILNIEEQDIFQLSPSILSSSFGTSYRHVQRVIKQFIDQGI 188 Query: 186 LIKSK-KGYLIKNRKQLSGLA 205 + K K Y I R L LA Sbjct: 189 IEKKAFKTYRILQRDSLETLA 209 >UniRef50_Q3D9B2 Cyclic nucleotide-binding domain protein n=11 Tax=Streptococcus RepID=Q3D9B2_STRAG Length = 214 Score = 181 bits (461), Expect = 1e-44, Method: Composition-based stats. Identities = 59/206 (28%), Positives = 102/206 (49%) Query: 2 SESAFKDCFLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLI 61 + + F D ++ A + ++G+Q +L Y+ +GR ++ L NG+ ++ Sbjct: 8 QDYCLETIFPKHYFKDLQVITLTAGQSVCKQGEQLEYLHYIVKGRFKIVRRLFNGKEHIL 67 Query: 62 DFFAAPCFIGEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSH 121 D P IG+IEL+ +V A+E+ + L +K + LL D FL KL L+ Sbjct: 68 DIKTKPTLIGDIELLTNRQIVSSVIALEDITVIQLSLKGRKEKLLTDATFLLKLSQELAQ 127 Query: 122 KNYRNIVSLTQNQSFPLVNRLAAFILLSQEGDLYHEKHTQAAEYLGVSYRHLLYVLAQFI 181 + + + N + + LA+ IL +E +H + + A+ G+SYRHLL V+ + Sbjct: 128 AFHDQNIKASTNLGYTVKELLASHILAIEEQGCFHLELSSLADSFGISYRHLLRVIHDMV 187 Query: 182 HDGLLIKSKKGYLIKNRKQLSGLALE 207 +GL+ K K Y IKNR L L ++ Sbjct: 188 KEGLIQKEKPKYFIKNRFALESLNIQ 213 >UniRef50_C0X6Y2 Cyclic nucleotide-binding domain protein n=22 Tax=Enterococcus faecalis RepID=C0X6Y2_ENTFA Length = 221 Score = 181 bits (461), Expect = 1e-44, Method: Composition-based stats. Identities = 72/209 (34%), Positives = 112/209 (53%), Gaps = 11/209 (5%) Query: 2 SESAFKDCFLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLI 61 +E+ K F+ D F +++I + + ++LFYL +G+A++ T NGR S++ Sbjct: 22 NETDLKHSFIID---------FENQEFIHHQAEPLNYLFYLIKGKAKILKTERNGRQSIV 72 Query: 62 DFFAAPCFIGEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSH 121 F A IG++ L+ + + V A+ E CLA+P+ + +L N LF+++L L Sbjct: 73 QFLTAGDLIGDLTLVQAETITKDVIALGETCCLAVPLAYAETVLKNKVLFMQQLSHYLGK 132 Query: 122 KNYRNIVSLTQNQSFPLVNRLAAFIL-LSQEGDLYHEKHTQAAEYLGVSYRHLLYVLAQF 180 K + + T NQ++ L RLA +L + D+Y EKHT+ AEYLGVSYRHL+Y QF Sbjct: 133 KMLQRVDHFTTNQTYELSYRLAELLLVAANHEDVYKEKHTEIAEYLGVSYRHLIYTFKQF 192 Query: 181 IHDGLLIKSKKGYLIKNRKQLSGLALEMD 209 G + K Y I NR L +M Sbjct: 193 RERGFIQKQGTAYHI-NRLALHSFVQKMK 220 >UniRef50_B7H5E4 Catabolite gene activator n=39 Tax=Bacillus cereus group RepID=B7H5E4_BACC4 Length = 231 Score = 180 bits (457), Expect = 3e-44, Method: Composition-based stats. Identities = 49/215 (22%), Positives = 103/215 (47%), Gaps = 8/215 (3%) Query: 1 MSESAFKDCFLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSL 60 + + + F +A +L HF + I + L+++ +G+ ++Y G+ + Sbjct: 12 LRTNKTLEIFSEIDTAYFQLNHFEKGELICNIDDEMDRLYFVVKGKVKVYTITPEGKKLI 71 Query: 61 IDFFAAPCFIGEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLS 120 + F +G+IELI V+A + +++ R LL+D +F++ L ++ Sbjct: 72 LRFINPLAIVGDIELIQNSKAHNVVEACSDVVAISISNTVIRNKLLHDPIFMKFLLENIA 131 Query: 121 HKNYRNIVSLTQNQSFPLVNRLAAFILLSQ--------EGDLYHEKHTQAAEYLGVSYRH 172 + + N +P+ R+A+++L +GDL T A+++GVSYRH Sbjct: 132 NTLKISTRFTALNLLYPVEVRVASYLLSISTDSNGNMYKGDLDATSVTSIADFIGVSYRH 191 Query: 173 LLYVLAQFIHDGLLIKSKKGYLIKNRKQLSGLALE 207 ++ VL +F ++ L+ KS +IK+ ++ +A + Sbjct: 192 VIRVLQRFYNEKLIEKSNGVIVIKDFSRMKEVAKD 226 >UniRef50_C7UQ67 Predicted protein n=2 Tax=Enterococcus faecalis RepID=C7UQ67_ENTFA Length = 226 Score = 177 bits (449), Expect = 3e-43, Method: Composition-based stats. Identities = 58/202 (28%), Positives = 99/202 (49%), Gaps = 1/202 (0%) Query: 4 SAFKDCFLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDF 63 + T ++ +L F +++++ Q + L++L G +Y + I + Sbjct: 22 YQLQSYMDTPLAEIGQLVTFEKSEHLIELDQSSNHLYFLLEGNVMIYTPTLEDQKVCISY 81 Query: 64 FAAPCFIGEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKN 123 +GE + K V A C CL +P+ +R L ND LFL+ +C+TLS + Sbjct: 82 THPIALLGEASSLWKKSPKSNVLANTACLCLCIPLNEHRTALQNDLLFLQTICLTLSERL 141 Query: 124 YRNIVSLTQNQSFPLVNRLAAFILLSQEGDLYHEKHTQAAEYLGVSYRHLLYVLAQFIHD 183 + L + P+ RLA +IL Q+ ++ K T A L VSYRHL ++ QF + Sbjct: 142 -NSGALLASSLIEPVDVRLAKYILAHQKNSYFNCKLTTCATTLNVSYRHLTRLITQFKKE 200 Query: 184 GLLIKSKKGYLIKNRKQLSGLA 205 GL+ K ++ YLI N ++L+ +A Sbjct: 201 GLIQKEQQEYLILNPEKLTDIA 222 >UniRef50_UPI0001C3627B cyclic nucleotide-binding protein n=1 Tax=Clostridium hathewayi DSM 13479 RepID=UPI0001C3627B Length = 225 Score = 175 bits (444), Expect = 1e-42, Method: Composition-based stats. Identities = 47/184 (25%), Positives = 95/184 (51%), Gaps = 1/184 (0%) Query: 21 FHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDFFAAPCFIGEIELIDKD- 79 F A + +++EG W+ + G A++ T NG+ ++ + + IGEIEL+ + Sbjct: 30 LRFAAGEDVLREGHPIGWIAIVVEGNAKVCRTAPNGKSLILCYNISHGLIGEIELMTRQV 89 Query: 80 HEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKNYRNIVSLTQNQSFPLV 139 + +V+A+ E C+A+ ++ L + +FL KL L+ K + + T Sbjct: 90 NATSSVKAVTELECVAVSYQNCLAELKTNLVFLNKLGTELAEKLTASSDNFTSTALCTGE 149 Query: 140 NRLAAFILLSQEGDLYHEKHTQAAEYLGVSYRHLLYVLAQFIHDGLLIKSKKGYLIKNRK 199 RL A+++ + L+ + T + +G+SYRH+ +L + +G+L K + GY I +++ Sbjct: 150 QRLCAYVIQNSHRGLFCDTLTDVSCSVGMSYRHMFRLLGKLCEEGMLEKRESGYCIVDQE 209 Query: 200 QLSG 203 +L+ Sbjct: 210 ELAR 213 >UniRef50_C5EL33 Cyclic nucleotide-binding protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EL33_9FIRM Length = 228 Score = 175 bits (443), Expect = 1e-42, Method: Composition-based stats. Identities = 62/205 (30%), Positives = 103/205 (50%), Gaps = 1/205 (0%) Query: 1 MSESAFKDCFLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSL 60 + ++ + D+ + + L F +Y+V+ G +L +L G + A N + + Sbjct: 14 IRDNHLETYMSADIFSISELLLFDKNEYLVEAGYPADYLCFLVNGEVIISACSTNDKSTC 73 Query: 61 IDFFAAPCFIGEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLS 120 I + IGE + + R+V+A+ C C+ + + YR LLLND LFL+ +C L+ Sbjct: 74 ISYCHQFTIIGEAASLWQMAPCRSVRAMTRCTCIGINLTKYRQLLLNDLLFLQNICQILT 133 Query: 121 HKNYRNIVSLTQNQSFPLVNRLAAFILLSQEGDLYHEKHTQAAEYLGVSYRHLLYVLAQF 180 K L+Q S PL RL+ FIL G ++ + T A+ L SYRHLL +L F Sbjct: 134 CKL-NTENELSQTLSDPLEVRLSRFILEYSIGQMFTFQLTNCADILNTSYRHLLRMLKCF 192 Query: 181 IHDGLLIKSKKGYLIKNRKQLSGLA 205 G+L K++ Y+I + +L +A Sbjct: 193 CAMGILKKARNCYVIMDGTRLGEIA 217 >UniRef50_A5I0L6 Cyclic nucleotide-binding domain protein n=19 Tax=Clostridium RepID=A5I0L6_CLOBH Length = 229 Score = 174 bits (441), Expect = 2e-42, Method: Composition-based stats. Identities = 45/210 (21%), Positives = 95/210 (45%), Gaps = 3/210 (1%) Query: 1 MSESAFKDCFLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSL 60 + + + F D+ +L + +YI++ + + + G+ ++ NG+ L Sbjct: 14 IDKHNIESIFDKDILKYAQLHFYEKEEYILKAESNLEYYYLIVDGKIKISYPFENGKPML 73 Query: 61 IDFFAAPCFIGEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLS 120 + F+ IG++E + V A+ + + +A+P R L++ FL L +LS Sbjct: 74 LKFYKDFNTIGDLEFLKNIPILCDVDAVGDTYLIAIPSDILRKKYLDNVKFLHHLIDSLS 133 Query: 121 HKNYRNIVSLTQNQSFPLVNRLAAFILLSQEGD---LYHEKHTQAAEYLGVSYRHLLYVL 177 K Y I + + N +PL+NRL+++++ E + + + A++LG +YRHL Sbjct: 134 EKLYATINNSSYNFVYPLINRLSSYLVEHIEDKNYIILNSSFLEIAQFLGTTYRHLNRTF 193 Query: 178 AQFIHDGLLIKSKKGYLIKNRKQLSGLALE 207 + ++ K I + +L L+ Sbjct: 194 KELESKSIIKCENKTIYILDENRLRALSKN 223 >UniRef50_C5WE90 Cyclic nucleotide-binding domain protein n=1 Tax=Streptococcus dysgalactiae subsp. equisimilis GGS_124 RepID=C5WE90_STRDG Length = 206 Score = 173 bits (439), Expect = 4e-42, Method: Composition-based stats. Identities = 62/203 (30%), Positives = 99/203 (48%), Gaps = 1/203 (0%) Query: 1 MSESAFKDCFLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSL 60 M+ES + +V A +R+ F I++ Q + L+Y+ GRA++Y + +G+ Sbjct: 1 MTESIY-SLVSKEVIAKSRVQIFQHNTAIIKANQTLTHLYYILDGRAKIYHSTEHGKDIF 59 Query: 61 IDFFAAPCFIGEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLS 120 I F +A +IGE+ + + E + V +I E LA+P L +D FL +L + Sbjct: 60 IHFLSANDWIGELTFLGIEEETKQVISIGETCVLAIPKHLVENHLFSDKQFLIELNRFIG 119 Query: 121 HKNYRNIVSLTQNQSFPLVNRLAAFILLSQEGDLYHEKHTQAAEYLGVSYRHLLYVLAQF 180 K +NQS+ L RLA F++ +Y EKH +YLG SYRHLL VL F Sbjct: 120 KKLLDRTHHFVKNQSYDLKYRLATFMIDMSHKAVYSEKHVNVVDYLGTSYRHLLQVLKDF 179 Query: 181 IHDGLLIKSKKGYLIKNRKQLSG 203 + + K + N+ +L Sbjct: 180 QDENYIEKIGQSTYRLNKAKLQD 202 >UniRef50_C8ZXE5 Cyclic nucleotide-binding domain-containing protein n=1 Tax=Enterococcus gallinarum EG2 RepID=C8ZXE5_ENTGA Length = 219 Score = 173 bits (438), Expect = 5e-42, Method: Composition-based stats. Identities = 64/208 (30%), Positives = 104/208 (50%), Gaps = 1/208 (0%) Query: 4 SAFKDCFLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDF 63 F T + ++ F + I +E + L+ + G+A++ + ANG+ S++ F Sbjct: 13 HQLDLPFSTGTLEQSSVYEFSHNEIIQEEAGTLTHLYVILEGKAKIIKSQANGKRSILQF 72 Query: 64 FAAPCFIGEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKN 123 + FIG++ L+ + + V AI CLALP+ H + +L+ D F++ + + K Sbjct: 73 LHSGDFIGDLTLVSAEKTTKEVLAIGPTVCLALPIDHAKQVLMQDIDFVKMISQYIGDKL 132 Query: 124 YRNIVSLTQNQSFPLVNRLAAFILLSQEGDLYHEKHTQAAEYLGVSYRHLLYVLAQFIHD 183 R + + NQ++ L RLA +L +Y EK T+ AEYLGVSYRHL Y L F + Sbjct: 133 IRRMEHFSINQTYQLNYRLALLLLEVAVAGIYQEKLTETAEYLGVSYRHLTYTLKTFKEN 192 Query: 184 GLLIKSKKGYLIKNRKQLSGLALEMDPE 211 + + +GY I N L L M E Sbjct: 193 DCVYRESRGYRI-NEANLKQLIRSMQRE 219 >UniRef50_A2RKL5 Cyclic nucleotide-binding domain protein n=1 Tax=Lactococcus lactis subsp. cremoris MG1363 RepID=A2RKL5_LACLM Length = 218 Score = 173 bits (438), Expect = 5e-42, Method: Composition-based stats. Identities = 61/188 (32%), Positives = 99/188 (52%) Query: 20 LFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDFFAAPCFIGEIELIDKD 79 + +F + I+ E + ++Y+ G+A++ NG+ L+ F +IGE+ ++ + Sbjct: 31 IVNFKHNETIIHENEPLKNIYYIIDGKAKITDIQYNGKSILLQFLKNKDWIGELTILGVE 90 Query: 80 HEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKNYRNIVSLTQNQSFPLV 139 E + V AI CL +P+ LL D F ++L V LS K ++NQS+ L Sbjct: 91 EETKNVTAIGNLTCLMIPLNIVERYLLIDINFFKELSVFLSKKLLDRTNHFSKNQSYELK 150 Query: 140 NRLAAFILLSQEGDLYHEKHTQAAEYLGVSYRHLLYVLAQFIHDGLLIKSKKGYLIKNRK 199 +RLA F+L S D+Y E H AEYLGVSYRHLL + + F G + K K N + Sbjct: 151 HRLATFLLESSNNDIYQESHIVVAEYLGVSYRHLLQIFSDFKSLGYIEKIGKNNYKINHQ 210 Query: 200 QLSGLALE 207 +L ++++ Sbjct: 211 KLMEISIK 218 >UniRef50_A0RHC9 Transcriptional regulator, Crp/Fnr family n=5 Tax=Bacillus cereus group RepID=A0RHC9_BACAH Length = 229 Score = 168 bits (425), Expect = 2e-40, Method: Composition-based stats. Identities = 42/197 (21%), Positives = 96/197 (48%), Gaps = 6/197 (3%) Query: 19 RLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDFFAAPCFIGEIELIDK 78 + + A++ ++ EG+ L+ GR ++ +++ G+ L+ F +A +G+IELI Sbjct: 31 EIRRYEAKETVLHEGETIDGLYIQMSGRTKITSSVITGKALLLRFCSAVSIMGDIELIQS 90 Query: 79 DHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKNYRNIVSLTQNQSFPL 138 V + ++ L + + LL+D +FL++L +++K + N P+ Sbjct: 91 VDIQSHVTSEQQTDFLFIDKNYVTSYLLHDVVFLQELIHHVTYKLQTCTTASRINLLAPV 150 Query: 139 VNRLAAFILLSQE------GDLYHEKHTQAAEYLGVSYRHLLYVLAQFIHDGLLIKSKKG 192 R A+++ +Q +++ + H + A +G + RHL V+ + I D ++ K+ K Sbjct: 151 ETRFASYLCTAQNPSHLFGREIHTKDHHEIASLIGTTTRHLNRVIEKLIADNIIHKNNKQ 210 Query: 193 YLIKNRKQLSGLALEMD 209 ++ + K + L+ + Sbjct: 211 IVVDDWKAIDTLSNGLR 227 >UniRef50_B1MYN1 Cyclic AMP receptor protein, putative n=1 Tax=Leuconostoc citreum KM20 RepID=B1MYN1_LEUCK Length = 218 Score = 166 bits (421), Expect = 4e-40, Method: Composition-based stats. Identities = 59/188 (31%), Positives = 88/188 (46%), Gaps = 2/188 (1%) Query: 20 LFHFLARDYIV--QEGQQPSWLFYLTRGRARLYATLANGRVSLIDFFAAPCFIGEIELID 77 L HF D I + + L+Y+ +GRA++ G+ +LI F +IGE+E + Sbjct: 25 LTHFKNGDIITTSESNNHTARLYYMVKGRAKVIFLSQEGQTNLIQFLKPNDWIGELEFLT 84 Query: 78 KDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKNYRNIVSLTQNQSFP 137 ++ + V AI + C+ +P LL + +L+ + L+ K + QS+P Sbjct: 85 TENTSKQVIAIGDTTCITIPNVLVNQYLLTNVDYLKNMNQYLTRKLLERTDMMIVGQSYP 144 Query: 138 LVNRLAAFILLSQEGDLYHEKHTQAAEYLGVSYRHLLYVLAQFIHDGLLIKSKKGYLIKN 197 RLA+FIL Y E H YLG+SYRHLL QF LLIK + N Sbjct: 145 FKFRLASFILADTYRGEYSEPHAVVMAYLGISYRHLLNTYQQFETAQLLIKVGRNRYQVN 204 Query: 198 RKQLSGLA 205 +L LA Sbjct: 205 TAKLKQLA 212 >UniRef50_C4IGF0 Cyclic nucleotide-binding domain protein n=2 Tax=Clostridium butyricum RepID=C4IGF0_CLOBU Length = 223 Score = 165 bits (417), Expect = 1e-39, Method: Composition-based stats. Identities = 50/210 (23%), Positives = 98/210 (46%), Gaps = 3/210 (1%) Query: 1 MSESAFKDCFLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSL 60 + + F + +L + + I + + S + ++ +G ++Y A G+V Sbjct: 14 VEKYNIDKIFSFWDKYEAKLVKYSKNEIICSKDRSISQITFIVKGYVKIYYVSAEGKVLY 73 Query: 61 IDFFAAPCFIGEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLS 120 + +GE+E + P +++ E +++ Y+ LL D +F R + L+ Sbjct: 74 LALKKDFTMLGEVEFAGEIDIPY-AESVSEVIAVSISTDKYKDLLNEDVVFCRYVIKCLA 132 Query: 121 HKNYRNIVSLTQNQSFPLVNRLAAFILLSQEGDLYHEKHTQAAEYLGVSYRHLLYVLAQF 180 K + + NQ +RLA +IL +++ ++ EK T+ + L SYR L+ +L F Sbjct: 133 SKISLSAKTSFINQLHSKESRLAIYILTNEKNNVIDEKWTETSNLLAFSYRQLMRLLNNF 192 Query: 181 IHDGLLIKSKK--GYLIKNRKQLSGLALEM 208 DGL+ +S K Y I NR++L L ++ Sbjct: 193 CEDGLIKRSNKKGRYEIVNREKLQNLCADL 222 >UniRef50_UPI0001B9EE88 putative transcriptional regulator, Crp/Fnr family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001B9EE88 Length = 232 Score = 164 bits (416), Expect = 2e-39, Method: Composition-based stats. Identities = 45/217 (20%), Positives = 89/217 (41%), Gaps = 8/217 (3%) Query: 1 MSESAFKDCFLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSL 60 + + F + A L + + I+ EG L +L +G+ ++ +++ G+ L Sbjct: 14 LEQFQFGNMLDLGKPAPFTLQQYEPGEIILHEGFAMQSLLFLVQGKIKVTSSIETGKSLL 73 Query: 61 IDFFAAPCFIGEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLS 120 + F IG+IELI ++A+ EC + L + R + + F L LS Sbjct: 74 LRFGHPFSIIGDIELIRDVPVQSQIEAVNECLFIGLSFDYIRLHEMTNARFTSTLLDHLS 133 Query: 121 HKNYRNIVSLTQNQSFPLVNRLAAFILLSQEGD--------LYHEKHTQAAEYLGVSYRH 172 +K + N + NR A++++ + L + + A LG ++RH Sbjct: 134 YKLQTCTTASRVNLLASVENRFASYLMSTMSPGSDPSFGMELKTDHIGEIASLLGTTHRH 193 Query: 173 LLYVLAQFIHDGLLIKSKKGYLIKNRKQLSGLALEMD 209 L V+ F G+L ++ + I + L + + Sbjct: 194 LNRVMFAFAQKGILERNGQTIRILDWTALETASNGIR 230 >UniRef50_C3AP08 Transcriptional regulator, Crp/Fnr n=3 Tax=Bacillus RepID=C3AP08_BACMY Length = 241 Score = 163 bits (413), Expect = 4e-39, Method: Composition-based stats. Identities = 35/197 (17%), Positives = 89/197 (45%), Gaps = 6/197 (3%) Query: 19 RLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDFFAAPCFIGEIELIDK 78 ++ + ++ ++ EG+ L+ GR ++ ++ G+ L+ F +A +G+IELI Sbjct: 43 QIRRYDVKEIVLHEGEAIDGLYIQISGRTKITTSVITGKALLLRFCSAVSIMGDIELIQN 102 Query: 79 DHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKNYRNIVSLTQNQSFPL 138 + V A E+ + + + +LL+D F ++L +++K + N + Sbjct: 103 VNIQSHVSAEEKTDFIFINKHYVNNVLLHDIAFSQELLHHVTYKLQTCTTASRINLLASV 162 Query: 139 VNRLAAFILLSQE------GDLYHEKHTQAAEYLGVSYRHLLYVLAQFIHDGLLIKSKKG 192 R A+++ + ++ H + A +G + RHL ++ + ++ K K Sbjct: 163 ETRFASYLCTIRNTSKLFGREIRTTDHHEIASLIGTTTRHLNRIIEKLSITNVIRKENKQ 222 Query: 193 YLIKNRKQLSGLALEMD 209 ++K+ + + ++ + Sbjct: 223 IIVKDWESIERISNGLR 239 >UniRef50_C4L0C4 Transcriptional regulator, Crp/Fnr family n=1 Tax=Exiguobacterium sp. AT1b RepID=C4L0C4_EXISA Length = 224 Score = 163 bits (412), Expect = 5e-39, Method: Composition-based stats. Identities = 51/215 (23%), Positives = 92/215 (42%), Gaps = 8/215 (3%) Query: 1 MSESAFKDCFLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSL 60 ++ + F + + + + + + Q LF + GR ++Y G++ L Sbjct: 8 LTRLQWNHLFSNETLESSSVVTYASGTMLCSNDQHIESLFVVLEGRVKIYTLSEEGKLRL 67 Query: 61 IDFFAAPCFIGEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLS 120 + AAP IG+IE + V+A+ CL +P + R F L +S Sbjct: 68 LRLKAAPTLIGDIEYASGRNVLHTVEAVGPVTCLRIPFEALRRY-NRTVEFTEHLLRGVS 126 Query: 121 HKNYRNIVSLTQNQSFPLVNRLAAFILLSQEGD-------LYHEKHTQAAEYLGVSYRHL 173 K + + + + L RLA +++ E + K + AE+LG SYRHL Sbjct: 127 EKLFIEANASSNHLMSTLEERLAGYLISLSESGNELFQAEMSQLKRKEVAEWLGTSYRHL 186 Query: 174 LYVLAQFIHDGLLIKSKKGYLIKNRKQLSGLALEM 208 L F+ +GL+ +++K +I N ++L A M Sbjct: 187 NRTLQAFVDEGLVKRTRKEVIILNSERLKERANGM 221 >UniRef50_A9KSA1 Cyclic nucleotide-binding protein n=2 Tax=Clostridium RepID=A9KSA1_CLOPH Length = 205 Score = 162 bits (411), Expect = 7e-39, Method: Composition-based stats. Identities = 49/204 (24%), Positives = 99/204 (48%), Gaps = 1/204 (0%) Query: 5 AFKDCFLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDFF 64 F + + + + F I + + +++ G ++Y NGR S++DFF Sbjct: 2 IFNNEIPSILLENGMKKTFNEGSNIYKVNSSVTHCYFILSGTVKIYIDHKNGRRSILDFF 61 Query: 65 AAPCFIGEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKNY 124 + ++GE+ L + E + + +++ CL + L + +++K Sbjct: 62 GSNDWLGELSLFCNEAEIKENKVLQDVECLEFDKDELQKLCKENAKVSFYFASYIANKLL 121 Query: 125 RNIVSLTQNQSFPLVNRLAAFILLSQEGDLYHEKHTQAAEYLGVSYRHLLYVLAQFIHDG 184 ++++ ++ L RLA+F++ Q+ +Y HT +EY+ VSYRH+LYV+ QF Sbjct: 122 ARSYRMSESLNYSLDIRLASFVIQHQQKGIYSIPHTDVSEYMNVSYRHVLYVMKQFCELE 181 Query: 185 LLIKSK-KGYLIKNRKQLSGLALE 207 +L K K KGY+I + ++L + + Sbjct: 182 ILTKEKGKGYIISDIEKLKRIQDK 205 >UniRef50_B2V833 Transcriptional regulator, Crp/Fnr family n=2 Tax=Aquificales RepID=B2V833_SULSY Length = 223 Score = 161 bits (408), Expect = 1e-38, Method: Composition-based stats. Identities = 44/204 (21%), Positives = 86/204 (42%), Gaps = 1/204 (0%) Query: 4 SAFKDCFLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDF 63 S + L +++ +R+ + + EG++ L+ L G+ ++Y T G I+ Sbjct: 13 SQLSEETLRKLASISRVKEYEPGQVLFFEGEKAENLYILLEGKLKVYKTTFKGIEVFINQ 72 Query: 64 FAAPCFIGEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKN 123 F IGE+ +K P + I E L + + + L + L + +LS+K Sbjct: 73 FGPVTLIGEMANFEKVPYPATAEFITEGKVLIINFRTFEEEFLKNPEILVSIIKSLSNKI 132 Query: 124 YRNIVSLTQNQSFPLVNRLAAFILLSQEGDLYHEKHTQAAEYLGVSYRHLLYVLAQFIHD 183 + R+A IL S E KH Q A +L ++ L V+++ Sbjct: 133 RMLNKFIDSTVVLSADARVAKLILESPEIFEV-LKHNQIASFLNITPETLSRVISRLKQK 191 Query: 184 GLLIKSKKGYLIKNRKQLSGLALE 207 G++ + +IK+R +L ++ + Sbjct: 192 GIIFIDGRKIIIKDRDKLKKISKD 215 >UniRef50_Q30Y06 Transcriptional regulator, Crp/Fnr family n=6 Tax=Desulfovibrionales RepID=Q30Y06_DESDG Length = 248 Score = 160 bits (406), Expect = 3e-38, Method: Composition-based stats. Identities = 42/189 (22%), Positives = 73/189 (38%), Gaps = 6/189 (3%) Query: 24 LARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDFFAAPCFIGEIELIDKDHEPR 83 I EG + L+ + GR +++ T +GR +++ F A GE+ + D P Sbjct: 55 DKGQIIFVEGTRAEGLYIVLDGRVKIFKTAPDGREAVMHVFGAGEPFGEVAVFQNDVFPA 114 Query: 84 AVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKNYRNIVSLTQNQSFPLVNRLA 143 A+E+ L LP + + D + LS K + + RLA Sbjct: 115 NAMAVEQSRVLFLPRRGIVDRIAQDPSLAMNMLAALSRKLRMFTRQVEALTLKEIPQRLA 174 Query: 144 AFILLSQ----EGDLYHE--KHTQAAEYLGVSYRHLLYVLAQFIHDGLLIKSKKGYLIKN 197 A++L D+ + A LG + L LA+ + G + + I + Sbjct: 175 AYLLHLSVKKGHKDVIRLDVSKSLLAGVLGTARETLSRALAKLVETGAITMEGRTITITD 234 Query: 198 RKQLSGLAL 206 R+ L+ LA Sbjct: 235 REYLTALAE 243 >UniRef50_D1AN20 Putative transcriptional regulator, Crp/Fnr family n=1 Tax=Sebaldella termitidis ATCC 33386 RepID=D1AN20_SEBTE Length = 224 Score = 157 bits (398), Expect = 2e-37, Method: Composition-based stats. Identities = 45/188 (23%), Positives = 84/188 (44%), Gaps = 1/188 (0%) Query: 20 LFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDFFAAPCFIGEIELIDKD 79 + + +YI + ++ + + G+ + + G L+ ++ +G+IE +K Sbjct: 29 IKTYKKGEYIFYQNEEIKNILIIYSGKVGVTLDSSKGHRLLLAIYSPNSMLGDIEFFNKS 88 Query: 80 HEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKNYRNIVSLTQNQSFPLV 139 QA+ + + + L N F+ L L+ K RNI + + N Sbjct: 89 CTVSNAQALSDTAVICISYSDIEK-LRNHNEFIYLLGQILAKKLTRNIKNNSINILNAAD 147 Query: 140 NRLAAFILLSQEGDLYHEKHTQAAEYLGVSYRHLLYVLAQFIHDGLLIKSKKGYLIKNRK 199 ++AA+I E +++ ++ +E LG+SYRHLL L F +G L+K K Y I + Sbjct: 148 IKIAAYIAGICENNIFDVNLSKLSELLGISYRHLLRRLKAFCENGYLLKIKDAYKITDLN 207 Query: 200 QLSGLALE 207 L LA + Sbjct: 208 SLKELAGD 215 >UniRef50_Q2SHS2 CAMP-binding protein-catabolite gene activator and regulatory subunit of cAMP-dependent protein kinase n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SHS2_HAHCH Length = 235 Score = 156 bits (394), Expect = 6e-37, Method: Composition-based stats. Identities = 46/203 (22%), Positives = 80/203 (39%), Gaps = 9/203 (4%) Query: 12 TDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDFFAAPCFIG 71 T++ ++ +++ Q G +P+ ++ + +G R+ NG+ +++ F P + G Sbjct: 29 TELLNLAQIKALRTGEFLFQRGDKPAGIYAVVKGSLRVAGVNENGKEAILAFVEPPNWFG 88 Query: 72 EIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKNYRNIVSLT 131 EI L D+ + A L LP K LL F R V L K ++ Sbjct: 89 EIALFDRLDRTHSALAESPTTLLHLPQKGLETLLAAKPHFWRDFGVLLCFKLRLAFRAVE 148 Query: 132 QNQSFPLVNRLAAFILLSQEG---------DLYHEKHTQAAEYLGVSYRHLLYVLAQFIH 182 P RLA +++ EG + H + Q LGVS + + +L + Sbjct: 149 DATLLPAPLRLARRLVVMAEGYGDFSGQARRVIHIQQEQLGMMLGVSRQTVNQILKELEQ 208 Query: 183 DGLLIKSKKGYLIKNRKQLSGLA 205 GL+ S I + L A Sbjct: 209 KGLIATSYGEIQILDMDALKSQA 231 >UniRef50_A3I0Z6 Putative FNR-family transcriptional regulator protein n=1 Tax=Algoriphagus sp. PR1 RepID=A3I0Z6_9SPHI Length = 218 Score = 153 bits (388), Expect = 3e-36, Method: Composition-based stats. Identities = 44/214 (20%), Positives = 94/214 (43%), Gaps = 12/214 (5%) Query: 4 SAFKDCFLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDF 63 S + + ++S + L + EG +P +F + G ++Y T +NG+ ++ Sbjct: 3 SDLPEQHVCNISENKNLISHRKGQILYYEGTKPLGIFCINSGVVKVYKTASNGKEQILHL 62 Query: 64 FAAPCFIGEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKN 123 F+G L+ +++ + +E+ +P + + L N+T F +++ LSH+ Sbjct: 63 AKEGDFLGYSALLGEENYSNSAMIVEDAKICFIPKETFLATLFNNTPFFKRITKALSHEL 122 Query: 124 YRNIVSLTQNQSFPLVNRLAAFILL-----------SQEGDLYHEKHTQAAEYLGVSYRH 172 LT + RLA IL +Q+ DL + A +G + Sbjct: 123 GIMEEKLTDATQKSIRERLAFVILQLASSYGVDGGETQKIDLV-LSREEIAGMVGTATES 181 Query: 173 LLYVLAQFIHDGLLIKSKKGYLIKNRKQLSGLAL 206 ++ +L++F D L+ K ++K+++ L+ L+ Sbjct: 182 VIRLLSEFKKDNLIELEGKRIIVKDKRGLARLSD 215 >UniRef50_Q2G6R8 Transcriptional regulator, Crp/Fnr family n=3 Tax=Sphingomonadaceae RepID=Q2G6R8_NOVAD Length = 229 Score = 153 bits (388), Expect = 3e-36, Method: Composition-based stats. Identities = 46/216 (21%), Positives = 93/216 (43%), Gaps = 11/216 (5%) Query: 2 SESAFKDCF---LTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRV 58 ++S F DC L+D+ ++ F ++ +G++ LF + G AR+ ANGR Sbjct: 12 AQSLFADCEQAELSDIIGRGQVRTFKPGQELMAQGEEGKTLFIVLSGLARVSMVAANGRE 71 Query: 59 SLIDFFAAPCFIGEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVT 118 ++D+ A +GEI +D +V+AIE L L + ++ +L Sbjct: 72 IILDYAEAGHVLGEIAFLDGGERTASVEAIEPVEALVLTRSAFAEIIDRHKGLSLRLLKA 131 Query: 119 LSHKNYRNIVSLTQNQSFPLVNRLAAFI--LLSQEGDL------YHEKHTQAAEYLGVSY 170 ++ + +N + ++++ RLA F+ L+ EG + + G+S Sbjct: 132 MARRLRQNNAVIEADRAYTSGPRLARFLLRLMMGEGSDAGAQLKIALSQGELGNFAGMSR 191 Query: 171 RHLLYVLAQFIHDGLLIKSKKGYLIKNRKQLSGLAL 206 + L+ + +G++ I +R+ L +A Sbjct: 192 EQINRQLSAWAENGIVALKGGRVTILDREALVDVAE 227 >UniRef50_A7GXI3 Transcription regulator n=5 Tax=Campylobacter RepID=A7GXI3_CAMC5 Length = 214 Score = 152 bits (385), Expect = 6e-36, Method: Composition-based stats. Identities = 44/200 (22%), Positives = 82/200 (41%), Gaps = 2/200 (1%) Query: 6 FKDCFLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDFFA 65 + + + T + +++ EG++P WL +L G +LY T ANG+ + A Sbjct: 13 LDEDEMKQLEDITIAKKYKKGEFLFMEGEEPKWLIFLLSGSVKLYKTAANGKEIFLHQLA 72 Query: 66 APCFIGEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKNYR 125 F+ E+ + P + L + + + L L++ L ++S K Sbjct: 73 PMNFVAEVVNFENIVYPASAVFTISGEVLKINYEKFATLFLSNPKICMNLIKSMSEKLRI 132 Query: 126 NIVSLTQNQSFPLVNRLAAFILLSQEGDLYHEKHTQAAEYLGVSYRHLLYVLAQFIHDGL 185 L Q ++A FIL+ E KHT+ A L ++ +L +F L Sbjct: 133 TSNLLHQELVLNSEAKVAKFILMH-EDLFNSLKHTKIASILNITPETFSRILNKFKTANL 191 Query: 186 LIKSKKGYLI-KNRKQLSGL 204 + +K +I KN +L+ + Sbjct: 192 IKLDEKNQIIDKNVDELTQI 211 >UniRef50_B8CWR3 Putative transcriptional regulator, Crp/Fnr family n=1 Tax=Halothermothrix orenii H 168 RepID=B8CWR3_HALOH Length = 226 Score = 152 bits (385), Expect = 7e-36, Method: Composition-based stats. Identities = 41/208 (19%), Positives = 80/208 (38%), Gaps = 8/208 (3%) Query: 4 SAFKDCFLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDF 63 S D L+ V++ + F I EG++ +++L +GR ++ T +G +++ Sbjct: 17 SEMSDEDLSTVASLLQTRIFKDGTNIFFEGEEGDRVYFLKKGRVKVKKTSPDGGEQILEI 76 Query: 64 FAAPCFIGEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKN 123 GE+ L D P AI E L +R N+ + ++ K Sbjct: 77 ITPGDVFGEVVLFGIDRYPATTVAIGEVVVDYLSRSKFRRYFTNNPEIGWGMLKVMARKL 136 Query: 124 YRNIVSLTQNQSFPLVNRLAAFILL--------SQEGDLYHEKHTQAAEYLGVSYRHLLY 175 R+ + R+A I+ + + H + A ++G S + Sbjct: 137 ARSQKRIENLGLRDTKGRVATLIMDMMRDFGEKNNQVVKLHFNRQELANFIGTSRETVSR 196 Query: 176 VLAQFIHDGLLIKSKKGYLIKNRKQLSG 203 L++F +GL+ K +IK+ + L Sbjct: 197 TLSEFKSEGLIDIKGKKLIIKDIEGLKR 224 >UniRef50_B8FJ06 Transcriptional regulator, Crp/Fnr family n=1 Tax=Desulfatibacillum alkenivorans AK-01 RepID=B8FJ06_DESAA Length = 237 Score = 151 bits (383), Expect = 1e-35, Method: Composition-based stats. Identities = 36/197 (18%), Positives = 65/197 (32%), Gaps = 6/197 (3%) Query: 21 FHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDFFAAPCFIGEIELIDKDH 80 F +I +G Q + G+ ++Y G+ + F GE+ + D Sbjct: 38 VSFKKGQFIFYDGDQADGFYAALDGQVKIYKISPEGKEQIFHVFGPGEPFGEVPVFSGDS 97 Query: 81 EPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKNYRNIVSLTQNQSFPLVN 140 P QA+ + CL K L+ + L+ + V + + Sbjct: 98 YPANAQALVKTKCLYFSRKGIVELINQSPAIAMNMLAVLARRLREFTVQVENLSLKEVDG 157 Query: 141 RLAAFILLSQEGD------LYHEKHTQAAEYLGVSYRHLLYVLAQFIHDGLLIKSKKGYL 194 R+A +IL + H A LG L L + GL+ K+ Sbjct: 158 RVAGYILHMATEQNSPDLVVLHISKAHLASLLGTIPETLSRSLGRLKDRGLIQVDKREIQ 217 Query: 195 IKNRKQLSGLALEMDPE 211 I +R+ L + + + Sbjct: 218 IIDRQGLEDCSTGGNGD 234 >UniRef50_B8D2C4 Putative transcriptional regulator, Crp/Fnr family n=1 Tax=Halothermothrix orenii H 168 RepID=B8D2C4_HALOH Length = 231 Score = 151 bits (383), Expect = 1e-35, Method: Composition-based stats. Identities = 43/196 (21%), Positives = 76/196 (38%), Gaps = 10/196 (5%) Query: 23 FLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDFFAAPCFIGEIELIDKDHEP 82 F + I E L+ L GR +L A G+ ++ GE+ L D+D P Sbjct: 35 FRKGEVIFFENDDNRNLYVLVSGRVKLSMLSAEGKEKVLTILQEGDIFGEVSLFDQDPLP 94 Query: 83 RAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKNYRNIVSLTQNQSFPLVNRL 142 + I++ + LP+K +++ + K+ L+ K + + RL Sbjct: 95 VTAEVIKDSRLIVLPVKDLENIIMKNPKVAIKIIEALAKKTRLLTGQIRDLVFYDAEGRL 154 Query: 143 AAFILLSQEGDLYHEK----------HTQAAEYLGVSYRHLLYVLAQFIHDGLLIKSKKG 192 A+ +L + K H + A LG S + +L QFI +G++ K+ Sbjct: 155 ASLLLRFAKDFGIDVKSGTLIDLVLTHQEIANLLGSSRVTVTKLLNQFIDEGIIKTYKRK 214 Query: 193 YLIKNRKQLSGLALEM 208 +I +QL M Sbjct: 215 IVIMKPEQLHDKMQNM 230 >UniRef50_A0LNW4 Transcriptional regulator, Crp/Fnr family n=3 Tax=Deltaproteobacteria RepID=A0LNW4_SYNFM Length = 228 Score = 151 bits (382), Expect = 1e-35, Method: Composition-based stats. Identities = 39/191 (20%), Positives = 69/191 (36%), Gaps = 6/191 (3%) Query: 22 HFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDFFAAPCFIGEIELIDKDHE 81 F + EG + + + + GR ++Y G+ ++ F A F E+ + Sbjct: 32 KFGKGQTLFSEGAKATGFYVIVSGRIKIYKLSLEGKEQILHIFGAGEFFAEVPVFAGGAF 91 Query: 82 PRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKNYRNIVSLTQNQSFPLVNR 141 P +AIE L P + L+ ++ + L + R + + R Sbjct: 92 PAHAEAIEASRVLFFPRAAFIELVRSEPSLALNMLAILCQRLRRFTHMVEDLSLKEVPGR 151 Query: 142 LAAFILLSQEGDLYHEKHT------QAAEYLGVSYRHLLYVLAQFIHDGLLIKSKKGYLI 195 LAA++L E ++ Q A LG L +LA+ + + I Sbjct: 152 LAAYLLYLGERAEGSDRLELDTTKGQLASLLGTIPETLSRILAKMSQQEFITVEGRRITI 211 Query: 196 KNRKQLSGLAL 206 NR+ L LA Sbjct: 212 LNREALENLAA 222 >UniRef50_C6XD76 Transcriptional regulator, Crp/Fnr family n=1 Tax=Methylovorus sp. SIP3-4 RepID=C6XD76_METSD Length = 227 Score = 151 bits (381), Expect = 2e-35, Method: Composition-based stats. Identities = 41/211 (19%), Positives = 84/211 (39%), Gaps = 11/211 (5%) Query: 4 SAFKDCFLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDF 63 L + S R+F + ++ +G + + LF+L GR + GR + ++F Sbjct: 13 QGLIQPLLDEYSRYFRMFRIEKKHFVCHKGDEANELFFLLSGRLMVVDISLEGRQTGLNF 72 Query: 64 FAAPCFIGEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKN 123 A + GE+ ++D P ++ A+ E ALP L+ + ++ + H+ Sbjct: 73 IAPGDYFGELSVLDDLPRPASIVAVSESLIAALPKSKVNSLVNHVPKVAERMLKDMCHRM 132 Query: 124 YRNIVS-------LTQNQSFPLVNRLAAFILLSQEGDLYHEKHTQAAEYLGVSYRHLLYV 176 ++ F L++R+A +Q + H Q A + S + Sbjct: 133 RMVTDLRCLLGVPNAYSRVFLLISRMAK----NQPYVDHFPSHQQVAIMVNTSRETVSRA 188 Query: 177 LAQFIHDGLLIKSKKGYLIKNRKQLSGLALE 207 L + +G++ K ++KN L +A + Sbjct: 189 LGLLVTEGVIEKEGMRLIVKNPAALHQMASD 219 >UniRef50_A7NFZ8 Transcriptional regulator, Crp/Fnr family n=6 Tax=Chloroflexi (class) RepID=A7NFZ8_ROSCS Length = 218 Score = 151 bits (381), Expect = 2e-35, Method: Composition-based stats. Identities = 38/203 (18%), Positives = 73/203 (35%) Query: 4 SAFKDCFLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDF 63 +A D L D + + +YI EG++P+ ++++ RGR RL T +GR ++ Sbjct: 14 AALDDRALADAARLMESRTYRPGEYIAYEGERPAGVYFVQRGRVRLSRTAPDGREQVLAM 73 Query: 64 FAAPCFIGEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKN 123 A + + D +A+ CL LP L+ + ++ + Sbjct: 74 VGAGENFNAVAIFDSHGNLTTARAMSLVQCLILPGDALITLIRRHPDLALAMLREMAGQL 133 Query: 124 YRNIVSLTQNQSFPLVNRLAAFILLSQEGDLYHEKHTQAAEYLGVSYRHLLYVLAQFIHD 183 V + + RLA +L H + AE L Q + Sbjct: 134 RNLAVLVEDLAFRSVRERLARELLREAREGAAELTHQELAERTATVREIAGRALRQLAQE 193 Query: 184 GLLIKSKKGYLIKNRKQLSGLAL 206 GL+ + ++ + L+ + Sbjct: 194 GLVRLERGRVVVLDPDGLARIGD 216 >UniRef50_B8GAV8 Transcriptional regulator, Crp/Fnr family n=3 Tax=Chloroflexus RepID=B8GAV8_CHLAD Length = 224 Score = 149 bits (377), Expect = 5e-35, Method: Composition-based stats. Identities = 41/206 (19%), Positives = 78/206 (37%), Gaps = 5/206 (2%) Query: 6 FKDCFLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDFFA 65 D + ++ + + + IV G+ P ++ + GR +L NGR +++ Sbjct: 18 LPDHVVQALAMIAQPRSYQSGAVIVLAGEPPQAMYTIVAGRVKLVRIALNGREQIVNVMG 77 Query: 66 APCFIGEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKNYR 125 A + + D P VQAI + L LP+ R L++ L L + + Sbjct: 78 AGQHFNTVPIFDHGPCPVNVQAITDVDLLVLPIDDMRRLVVEHPLLAMALLREFAGRLCH 137 Query: 126 NIVSLTQNQSFPLVNRLAAFIL---LSQEGDLYHEKHT--QAAEYLGVSYRHLLYVLAQF 180 + + + RLA +L ++ E + T + A + + L QF Sbjct: 138 MVNLIDNIALHSVQGRLAQLLLNRAIASEQGEFVAPLTQAEMAAMIDTVREMVSRTLHQF 197 Query: 181 IHDGLLIKSKKGYLIKNRKQLSGLAL 206 GL+ + I +R+ L+ A Sbjct: 198 EAQGLIRIERGAIAICDREGLAACAE 223 >UniRef50_B5YHX8 Transcriptional regulator, putative n=1 Tax=Thermodesulfovibrio yellowstonii DSM 11347 RepID=B5YHX8_THEYD Length = 222 Score = 149 bits (377), Expect = 6e-35, Method: Composition-based stats. Identities = 41/211 (19%), Positives = 89/211 (42%), Gaps = 10/211 (4%) Query: 4 SAFKDCFLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDF 63 + + + + +++ F R+ I EG P W L +G+ ++ NG+ +++ Sbjct: 9 QILNENDIKTLEKNLKVYKFKKRETIFNEGDIPQWFHVLIKGKIKISKFSNNGKEIILEL 68 Query: 64 FAAPCFIGEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKN 123 AP F G + L+ P + AI++C +P K + ++ ++ ++ + Sbjct: 69 LDAPDFFGTLALLKNIPYPASAIAIDDCDIGNIPSKTFLQIVNKYPELQSEILHHVTMRL 128 Query: 124 YRNIVSLTQNQSFPLVNRLAAFIL--------LSQEGDLYHEKHT--QAAEYLGVSYRHL 173 I SL +++R+ IL EG L K T + AE G + Sbjct: 129 KSGIESLKNIALVDVLSRIVYQILKLANKYGKKVSEGILIDLKLTKQEIAEMSGTTTETA 188 Query: 174 LYVLAQFIHDGLLIKSKKGYLIKNRKQLSGL 204 + ++++ +G + + + +IK+ + L L Sbjct: 189 IRIMSKLKKEGYITEQNRKIIIKDIEMLLNL 219 >UniRef50_D2QLW5 Transcriptional regulator, Crp/Fnr family n=1 Tax=Spirosoma linguale DSM 74 RepID=D2QLW5_9SPHI Length = 350 Score = 149 bits (376), Expect = 8e-35, Method: Composition-based stats. Identities = 44/197 (22%), Positives = 85/197 (43%), Gaps = 8/197 (4%) Query: 14 VSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDFFAAPCFIGEI 73 + AD +L + ++ +G +P+ L++L GR ++ T +G+ + D F FIG Sbjct: 152 LVADRKLHRVPKKQFVYSDGDEPTRLYFLKNGRVKIVRTSHDGKELVTDLFGPNSFIGYR 211 Query: 74 ELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLS-HKNYRNIVSLTQ 132 L++ + + +++ + +P + +L R+ L+ H N + L+ Sbjct: 212 ALLENTNYTDSAVTLDDSELIYIPKNEFLHILGTQPEAGRQFVHLLAGHVNGKEEQLLSM 271 Query: 133 NQSFPLVNRLAAFIL---LSQEGD---LYHEKHTQAAEYLGVSYRHLLYVLAQFIHDGLL 186 S L R+A +L S +G+ A +G + L+ +L +F HDGL+ Sbjct: 272 AYS-SLRRRVADTLLRLGTSPDGEPVPPIQLSRDDLAAVIGTATESLIRILTEFKHDGLI 330 Query: 187 IKSKKGYLIKNRKQLSG 203 S G I +L Sbjct: 331 EMSSAGIRIVEPDKLRR 347 >UniRef50_C0GFA6 Transcriptional regulator, Crp/Fnr family n=1 Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GFA6_9FIRM Length = 229 Score = 147 bits (372), Expect = 2e-34, Method: Composition-based stats. Identities = 38/200 (19%), Positives = 78/200 (39%), Gaps = 10/200 (5%) Query: 14 VSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDFFAAPCFIGEI 73 V+A + + EG+Q LF + +GR ++ + A+GR ++ E+ Sbjct: 28 VAAVMIERSYAKGSVLFMEGEQGEALFVIRQGRVKISKSTADGREQILHMLKDGDIFAEV 87 Query: 74 ELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKNYRNIVSLTQN 133 L D+ P +A+E+ C L L+ + L KL +S + + + + Sbjct: 88 VLFDRGPYPATAEAVEDTQCWLLRSADMEKLMQSHPLLAIKLLRVMSKRLRQAQLLVRDL 147 Query: 134 QSFPLVNRLAAFILLSQEGD----------LYHEKHTQAAEYLGVSYRHLLYVLAQFIHD 183 R+A +L + + A +G S + +L++F D Sbjct: 148 ALHDAYGRMAGLLLRFARREGKQTKDGIVLELDLTRQEMASMIGTSRETVARILSRFQKD 207 Query: 184 GLLIKSKKGYLIKNRKQLSG 203 G+L K+ ++ + ++L Sbjct: 208 GVLTLDKQRIVLLDEEKLRE 227 >UniRef50_B2UJ25 Transcriptional regulator, Crp/Fnr family n=10 Tax=Burkholderiaceae RepID=B2UJ25_RALPJ Length = 243 Score = 147 bits (372), Expect = 3e-34, Method: Composition-based stats. Identities = 52/207 (25%), Positives = 85/207 (41%), Gaps = 12/207 (5%) Query: 11 LTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDFFAAPCFI 70 L D++A RL A + + Q G P L+ + G R+ AT A+GR +L+ + Sbjct: 37 LIDIAAVRRLG---AGEILFQRGDAPDGLYCVVEGTIRIGATSADGREALLAVLEPVNWF 93 Query: 71 GEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKNYRNIVSL 130 GEI + D+ +A L +P LL L + L+HK + L Sbjct: 94 GEIGVFDRQPRTHDARADGHTTLLHMPQAALIALLDGSPALLHAFALLLTHKLRLTFIVL 153 Query: 131 TQNQSFPLVNRLAAFILLSQEG---------DLYHEKHTQAAEYLGVSYRHLLYVLAQFI 181 + P R+A +LL +G + H Q A+ L +S + + VL +F Sbjct: 154 EETALLPAPVRVARRLLLMADGYGDLRLGTRRVLHVPQEQLAQLLSLSRQTVNQVLKEFE 213 Query: 182 HDGLLIKSKKGYLIKNRKQLSGLALEM 208 G+L + + + L LA E+ Sbjct: 214 AHGILRLAYGEIELLDFAGLHRLAYEV 240 >UniRef50_Q39ZI3 Transcriptional regulator, Crp/Fnr family n=9 Tax=Desulfuromonadales RepID=Q39ZI3_GEOMG Length = 230 Score = 147 bits (371), Expect = 3e-34, Method: Composition-based stats. Identities = 41/212 (19%), Positives = 74/212 (34%), Gaps = 10/212 (4%) Query: 4 SAFKDCFLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDF 63 S L+DV+A F + + EG+ S + L +G +L +G+ ++ F Sbjct: 14 SGLDGENLSDVAAIATRRPFARGESLFSEGEPASGFYLLAQGSMKLCKVSPDGKEKVLHF 73 Query: 64 FAAPCFIGEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKN 123 E P +A E+ + P + + +L + F L V+LS Sbjct: 74 VHPGETFAEAAFFGDGKYPAEARATEKGEAIFFPREGFMGILERNPRFSLNLIVSLSLML 133 Query: 124 YRNIVSLTQNQSFPLVNRLAAFILLSQEGD----------LYHEKHTQAAEYLGVSYRHL 173 R + + + RLAA ++ E K + A LG L Sbjct: 134 RRFARQIEELTFAEVPARLAAHLVELAERKSTAFQGKTYLDLDMKKGELASRLGTVSETL 193 Query: 174 LYVLAQFIHDGLLIKSKKGYLIKNRKQLSGLA 205 + +GL+ +I + ++L A Sbjct: 194 SRAFRKLKEEGLIEVEGSRVVIFDMEKLKDAA 225 >UniRef50_Q30QZ1 Putative transcriptional regulator, Crp/Fnr family n=1 Tax=Sulfurimonas denitrificans DSM 1251 RepID=Q30QZ1_SULDN Length = 209 Score = 146 bits (370), Expect = 4e-34, Method: Composition-based stats. Identities = 38/183 (20%), Positives = 77/183 (42%), Gaps = 4/183 (2%) Query: 21 FHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDFFAAPCFIGEIELIDKDH 80 + + EG +P +L+ L +G +LY T ++ + ++ +F IGE+ + Sbjct: 29 HKVSKDNIVFYEGDEPKYLYLLVKGVIKLYKTSSSHKEIVLKYFHENELIGEVANFENIP 88 Query: 81 EPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKNYRNIVSLTQNQSFPLVN 140 P +A + L + + + ++ + + +L K ++ N Sbjct: 89 YPATAKAYSDVEFLKVDFEKLKEVIFLNPSLAFNIQTSLIKKIKNLENIISTNLVLDSKE 148 Query: 141 RLAAFILLSQEGDLYHEKHTQAAEYLGVSYRHLLYVLAQFIHDGLLIKSKKGYLIKNRKQ 200 R+A +I D + K+ + AE LGVS L +L F +G++ KK +++ Sbjct: 149 RVAKYIYSHS-DDFFETKNIEIAEILGVSPETLSRILKFFKDNGIINIKKKYI---DKET 204 Query: 201 LSG 203 LS Sbjct: 205 LSN 207 >UniRef50_C4XL82 Crp family transcriptional regulator n=2 Tax=Desulfovibrio RepID=C4XL82_DESMR Length = 242 Score = 146 bits (369), Expect = 4e-34, Method: Composition-based stats. Identities = 45/190 (23%), Positives = 71/190 (37%), Gaps = 5/190 (2%) Query: 21 FHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDFFAAPCFIGEIELIDKDH 80 + I G F + G+ R+Y T G+ +I F E+ + Sbjct: 31 RRYGRGQDIFFSGDPAEGFFSVASGKVRIYQTSLAGKEHIIHVFGPGEVFAEVAVFAGGV 90 Query: 81 EPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKNYRNIVSLTQNQSFPLVN 140 P QA+EE L P + +R LL +D + LS + + + L + Sbjct: 91 YPANAQAMEEGDYLFFPRERFRKLLADDPDLALTMLGLLSIRLRQLVRKLEDLSLREVPA 150 Query: 141 RLAAFILLSQEGD-----LYHEKHTQAAEYLGVSYRHLLYVLAQFIHDGLLIKSKKGYLI 195 RLA+ +LL Q A YLG L VL +F+ +GL+ + I Sbjct: 151 RLASHLLLLGAQSKKRVLPLDLPKGQLAAYLGTIPETLSRVLRRFVDEGLISLTGSAVEI 210 Query: 196 KNRKQLSGLA 205 + +L LA Sbjct: 211 LDAARLEALA 220 >UniRef50_A6EDB2 Putative FNR-family transcriptional regulator protein n=1 Tax=Pedobacter sp. BAL39 RepID=A6EDB2_9SPHI Length = 241 Score = 146 bits (369), Expect = 5e-34, Method: Composition-based stats. Identities = 39/216 (18%), Positives = 94/216 (43%), Gaps = 12/216 (5%) Query: 2 SESAFKDCFLTD---VSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRV 58 S+S + D + A+ + + D I +EG PS +FY+ +G + Y +GR Sbjct: 16 SQSILQSIPPEDHEQLCANMTVESYNKGDVIFKEGAVPSGIFYIQKGMVKKYKVDRDGRE 75 Query: 59 SLIDFFAAPCFIGEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVT 118 +I ++ IG ++ ++ P + IE C +P + + +L + ++ ++L Sbjct: 76 QIIHVASSGELIGYHAILAEERYPDSASTIEACSIAFIPKEDFLEVLGSSSILSQRLLKN 135 Query: 119 LSHKNYRNIVSLTQNQSFPLVNRLAAFIL---------LSQEGDLYHEKHTQAAEYLGVS 169 LSH+ +++ ++A ++ E + + + + G++ Sbjct: 136 LSHEFAVLTNNMSAMTQRTAREKVAITLIVLREKYKSMEDNENGIINISRSDLSNMAGIA 195 Query: 170 YRHLLYVLAQFIHDGLLIKSKKGYLIKNRKQLSGLA 205 +L+ +L +F ++ +L + I + K+L ++ Sbjct: 196 KENLVRILKEFKNNNILQTEGRKITINDVKKLVEIS 231 >UniRef50_C1TP24 cAMP-binding protein n=1 Tax=Dethiosulfovibrio peptidovorans DSM 11002 RepID=C1TP24_9BACT Length = 234 Score = 146 bits (368), Expect = 6e-34, Method: Composition-based stats. Identities = 36/209 (17%), Positives = 74/209 (35%), Gaps = 6/209 (2%) Query: 4 SAFKDCFLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDF 63 + + + + L ++ I +G+ F + RGR R+Y GR ++ Sbjct: 14 NGLSRDETEKILSISILKKARKKEIIFSDGEVGEGFFAVLRGRVRVYKMSEEGREVILHV 73 Query: 64 FAAPCFIGEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKN 123 G++ + + P QA+ + L P + + LL + + LS K Sbjct: 74 CGPGDHFGQVSMFAGKNYPAWAQAMSDSKLLLFPRRAFLDLLSREPQIAMSMMSGLSSKM 133 Query: 124 YRNIVSLTQNQSFPLVNRLAAFILLSQEGDLYHEKHT------QAAEYLGVSYRHLLYVL 177 + + + RLA+++++ E Q A LG + L + Sbjct: 134 RELTLQVESLALKEVPGRLASYLIMLAEEKKSPGSLHLDIPKWQLASVLGTTPETLSRIF 193 Query: 178 AQFIHDGLLIKSKKGYLIKNRKQLSGLAL 206 + GL+ ++ + + L LA Sbjct: 194 SDMTDRGLIDLDRRDVTLLDHTALKELAE 222 >UniRef50_B1HPB0 Regulatory protein nsr n=1 Tax=Lysinibacillus sphaericus C3-41 RepID=B1HPB0_LYSSC Length = 161 Score = 146 bits (368), Expect = 6e-34, Method: Composition-based stats. Identities = 49/145 (33%), Positives = 81/145 (55%), Gaps = 1/145 (0%) Query: 1 MSESAFKDCFLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSL 60 + + D F D++ + F ++I QEG P L+Y+ G+A+LY T NG+VSL Sbjct: 13 LEKYPIHDFFSFDINPYIEVCEFDKGEWIFQEGSFPETLYYMIEGKAKLYMTHKNGKVSL 72 Query: 61 IDFFAAPCFIGEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLS 120 I++ AP F+GEIEL+++ + +Q + + C ++ + + LL D LFLR+L V L Sbjct: 73 IEYLEAPRFMGEIELLNEARYTKGIQTVSKTICYSI-TQSCKEKLLADALFLRRLSVFLG 131 Query: 121 HKNYRNIVSLTQNQSFPLVNRLAAF 145 K + TQNQ++P +R + Sbjct: 132 EKATKITSKYTQNQAYPFESRFNSL 156 >UniRef50_Q2LPZ1 Cyclic nucleotide-binding domain protein n=4 Tax=Deltaproteobacteria RepID=Q2LPZ1_SYNAS Length = 229 Score = 145 bits (366), Expect = 1e-33, Method: Composition-based stats. Identities = 34/209 (16%), Positives = 75/209 (35%), Gaps = 6/209 (2%) Query: 4 SAFKDCFLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDF 63 + + L ++ R + I EG + + + G+ +++ G+ ++ Sbjct: 15 NGLSEQQLGEIRGIARDRFYDKGKEIFAEGDEGGGFYIVASGQVKVFKLSPEGKEHILHI 74 Query: 64 FAAPCFIGEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKN 123 + GE+ + + P + + + + L P + LL + L LS + Sbjct: 75 YGPGHSFGEVPVFSGERFPASAETLLKSHLLFFPRTDFVALLSGNPSLCMNLLADLSLRL 134 Query: 124 YRNIVSLTQNQSFPLVNRLAAFILLSQEGD------LYHEKHTQAAEYLGVSYRHLLYVL 177 + + + + RLA+++L + + + Q A LG L + Sbjct: 135 RQFTIQIENLTLKEVPGRLASYLLTLSDEEGQGNSLSLNISKGQLAGLLGTIPETLSRIF 194 Query: 178 AQFIHDGLLIKSKKGYLIKNRKQLSGLAL 206 + + GL+ K I +R L LA Sbjct: 195 LKMNNAGLIEVKGKEITILDRNGLQALAE 223 >UniRef50_C9KQT9 Transcriptional regulator, Crp/Fnr family n=1 Tax=Mitsuokella multacida DSM 20544 RepID=C9KQT9_9FIRM Length = 217 Score = 144 bits (365), Expect = 1e-33, Method: Composition-based stats. Identities = 42/215 (19%), Positives = 90/215 (41%), Gaps = 8/215 (3%) Query: 1 MSESAFKDCFLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSL 60 M + + A F +++V++G++ ++ LT+G R+ A+G+ Sbjct: 1 MKLEQVIEFMPESIRAKISHRTFRPGEFVVRKGERADHVYILTKGTTRVSNEFASGQRYT 60 Query: 61 IDFFAAPCFIGEIELI-DKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTL 119 P IG++E++ +++ +A+ EC +A+ ++ + D F + L Sbjct: 61 FAHQTVPDLIGDLEVLAGQEYFSATNEAVTECEVIAMTADTFKKWMRRDNHFACAIAQLL 120 Query: 120 SHKNYRNIVSLTQNQSFPLVNRLAAFI-----LLSQEGDLYHEKHTQAAEYLGVSYRHLL 174 + K Y Q + P + RL ++ L E + H Q A+ +G S + + Sbjct: 121 ASKMYPTSNENGQIKFQPSIQRLQEYLVKRLDLAPSEQFVLHTSRQQIADDIGTSVKTVN 180 Query: 175 YVLAQFIHDGLLI--KSKKGYLIKNRKQLSGLALE 207 +++ GL+ K + +++L L LE Sbjct: 181 RGVSKLRDAGLITLLHGKIAISVAQQEKLRTLKLE 215 >UniRef50_C4KA14 Transcriptional regulator, Crp/Fnr family n=1 Tax=Thauera sp. MZ1T RepID=C4KA14_THASP Length = 222 Score = 144 bits (365), Expect = 1e-33, Method: Composition-based stats. Identities = 39/203 (19%), Positives = 79/203 (38%), Gaps = 7/203 (3%) Query: 9 CFLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDFFAAPC 68 L +++ + + + G PS LF++ G RL + G+ +++ F Sbjct: 10 EVLDELARGAEFVRLSSSATVFERGSHPSGLFFVCNGAVRLMVSGPEGKDKVVELFEPGG 69 Query: 69 FIGEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKNYRNIV 128 GEI + + QA+ + +P + + D ++ V + + R I Sbjct: 70 MFGEIGVFTGERYRTWTQAVGAVVLVHVPRERVLAAVAMDNSLSNRMLVAVCARIQRLID 129 Query: 129 SLTQNQSFPLVNRLAAFILLSQEGD-------LYHEKHTQAAEYLGVSYRHLLYVLAQFI 181 ++ P R+A+++L E + A L ++ L VL + Sbjct: 130 AIGSTVGGPAAVRVASYLLEQLERGARSDGCIVLAAPKKTIASLLNLTPETLSRVLRSLV 189 Query: 182 HDGLLIKSKKGYLIKNRKQLSGL 204 +G+L S + ++NR QL+ L Sbjct: 190 EEGVLTVSGRRIRVRNRAQLARL 212 >UniRef50_C2CK26 Transcriptional regulator n=1 Tax=Anaerococcus tetradius ATCC 35098 RepID=C2CK26_9FIRM Length = 215 Score = 143 bits (362), Expect = 3e-33, Method: Composition-based stats. Identities = 46/194 (23%), Positives = 80/194 (41%), Gaps = 6/194 (3%) Query: 15 SADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDFFAAPCFIGEIE 74 AD L + +I +G+ L+ L GR ++Y G+ +I F P GE+ Sbjct: 23 IADLNLITYPKDSHIFTKGEIKDDLYCLIAGRIKVYKIDPEGKRYIIASFDKPAIFGEVY 82 Query: 75 LIDKDHEPRAVQAIEECWCLALPMKHYRPLLLN--DTLFLRKLCVTLSHKNYRNIVSLTQ 132 ++ QA + L + K +R L+ T F L+ K+ + Sbjct: 83 AYLREPFDFWAQADVDSKVLVI--KDFRKLINTSKSTNFRINFIEILARKSLKLSKKNQM 140 Query: 133 NQSFPLVNRLAAFILLSQEGDLYHE--KHTQAAEYLGVSYRHLLYVLAQFIHDGLLIKSK 190 N L ++AAF+L +++ DL + A+YL + L L++ GL+ Sbjct: 141 NSQANLKQKIAAFLLDNEKDDLVKLTISREEWADYLATTRPSLSRSLSEMAKKGLIRIED 200 Query: 191 KGYLIKNRKQLSGL 204 K I++RK L + Sbjct: 201 KLIRIEDRKSLEAM 214 >UniRef50_C0QTS3 Transcriptional regulator, Crp/Fnr family n=1 Tax=Persephonella marina EX-H1 RepID=C0QTS3_PERMH Length = 209 Score = 143 bits (361), Expect = 4e-33, Method: Composition-based stats. Identities = 48/200 (24%), Positives = 75/200 (37%), Gaps = 2/200 (1%) Query: 5 AFKDCFLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDFF 64 D L + + + D + EG++P L+ LT G R+Y T G + F Sbjct: 11 NLSDEHLKKIQKISFEREYERGDLLFYEGEEPENLYILTEGILRVYKTDIKGHEITLHHF 70 Query: 65 AAPCFIGEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKNY 124 I E + P + L + K + LL D+ + +L +K Sbjct: 71 HPVSLIAERANFENIPYPANAEFETNGKVLVINFKTFEKELLKDSNLCFNIVKSLLYKIK 130 Query: 125 RNIVSLTQNQSFPLVNRLAAFILLSQEGDLYHEKHTQAAEYLGVSYRHLLYVLAQFIHDG 184 + QN V R A FI E KH + A L ++ L +L +F G Sbjct: 131 ILDDVIVQNLMMDAVTRTAKFIYEH-EDLFISLKHNKIASILNMTPETLSRILKKFKTRG 189 Query: 185 LLIKSKKGYLIKNRKQLSGL 204 ++ K Y I NR++L L Sbjct: 190 IIQKDGGTYKI-NREELKKL 208 >UniRef50_A9WTJ5 Transcription regulator, crp family n=122 Tax=Actinomycetales RepID=A9WTJ5_RENSM Length = 270 Score = 142 bits (358), Expect = 9e-33, Method: Composition-based stats. Identities = 38/185 (20%), Positives = 69/185 (37%), Gaps = 10/185 (5%) Query: 29 IVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDFFAAPCFIGEIELIDKDHEPRAVQAI 88 + EG Q L+++ G+ +L T +GR SL+ GE+ L D A+ Sbjct: 83 VFHEGDQGDQLYFIVSGKVKLGRTAPDGRESLLAILGPGELFGEMALFDPSPRTATATAV 142 Query: 89 EECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKNYRNIVSLTQNQSFPLVNRLAAFILL 148 E L + R LL +L L+ + R +L+ + R+A ++ Sbjct: 143 SETRLAGLRNESLRALLQTSPEVSAQLLQALARRLRRTNDNLSDLVFSDVPGRVAKALID 202 Query: 149 SQEGD----------LYHEKHTQAAEYLGVSYRHLLYVLAQFIHDGLLIKSKKGYLIKNR 198 E + + A+ +G S + LA+F+ G L + +I + Sbjct: 203 LSERFGRPATDGVLVAHELTQEELAQLVGASRETVNKALAEFVQRGWLRLEARAVVILDI 262 Query: 199 KQLSG 203 +L Sbjct: 263 NRLRQ 267 >UniRef50_Q2SDD5 CAMP-binding protein-catabolite gene activator and regulatory subunit of cAMP-dependent protein kinase n=3 Tax=Gammaproteobacteria RepID=Q2SDD5_HAHCH Length = 216 Score = 141 bits (357), Expect = 1e-32, Method: Composition-based stats. Identities = 36/200 (18%), Positives = 67/200 (33%), Gaps = 6/200 (3%) Query: 4 SAFKDCFLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDF 63 S F L + F ++ EG L+ + GR R++ + NG+ ++ Sbjct: 11 SGFDAEQLQHLEKHAVFRCFQKNSIVITEGDHSDSLYIIVSGRVRVFCSDENGKEVTLND 70 Query: 64 FAAPCFIGEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKN 123 A + GE+ L D +V A E C L L L + L+ + Sbjct: 71 LKAGEYFGELALFDDKERSASVMATEPCRFLMLNKSSLLEAFRQTPDLAYNLIIHLTQRV 130 Query: 124 YRNIVSLTQNQSFPLVNRLAAFILLSQEGD------LYHEKHTQAAEYLGVSYRHLLYVL 177 ++ + R+A+ +L E + A +G S + ++ Sbjct: 131 RALTNNVKNLALMDVYGRVASTLLQLSERKGDRLITEIPLTQQEIANRVGASREMVSRIM 190 Query: 178 AQFIHDGLLIKSKKGYLIKN 197 G + KK +I + Sbjct: 191 KDLEIGGYIKVEKKKIVIND 210 >UniRef50_A3WI44 Transcriptional regulator, Crp/Fnr family protein n=1 Tax=Erythrobacter sp. NAP1 RepID=A3WI44_9SPHN Length = 232 Score = 141 bits (357), Expect = 1e-32, Method: Composition-based stats. Identities = 33/190 (17%), Positives = 87/190 (45%), Gaps = 7/190 (3%) Query: 24 LARDYIVQEGQQ-PSWLFYLTRGRARLYATLANGRVSLIDFFAAPCFIGEIELIDKDHEP 82 D ++ +G + + Y+ G ++ A+GR ++ + + IGEI L+D + Sbjct: 38 KPDDVVINQGDENGDYAVYVLSGGLKISFVSASGREIILSYCSPGEVIGEIALLDSEPRT 97 Query: 83 RAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKNYRNIVSLTQNQSFPLVNRL 142 A+ E L LP K + + ++ + ++ L+ + + + + +++F + RL Sbjct: 98 ATATAVVESSVLLLPSKQFLEAVSSNPTSVARIMRELAQRVRQQNLIIESDRTFSMGPRL 157 Query: 143 AAFILLSQEGD------LYHEKHTQAAEYLGVSYRHLLYVLAQFIHDGLLIKSKKGYLIK 196 A ++ + D LY+ + + G++ ++ +L+++ G++ + + ++ Sbjct: 158 ARALVRLIDKDRNDGGLLYNPSQSDLGAFAGLARENVSRLLSEWESQGIIARDGRTLSVR 217 Query: 197 NRKQLSGLAL 206 + + L LA Sbjct: 218 DIEYLRSLAE 227 >UniRef50_C3X8Q5 Transcriptional regulator n=1 Tax=Oxalobacter formigenes OXCC13 RepID=C3X8Q5_OXAFO Length = 215 Score = 141 bits (357), Expect = 1e-32, Method: Composition-based stats. Identities = 44/186 (23%), Positives = 79/186 (42%), Gaps = 5/186 (2%) Query: 19 RLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDFFAAPCFIGE-IELID 77 RL H+ R++I +G L G+ R +GR I+ AP + Sbjct: 32 RLAHYETREHIAMQGAPCRAFILLCEGQVRASMIGTDGRQITIEDHEAPMLLASNFVFAT 91 Query: 78 KDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKNYRNIVSLTQNQSFP 137 +H P + AI C + + + + L+ + + L+ LS +++ L Sbjct: 92 HNHFPVDIIAITPCEIMVIEKEPFMELMCTEPVVLQNFLRILSDRSHILSRKLGSLVLLK 151 Query: 138 LVNRLAAFILLSQEGDLYHEKHTQAAEYLGVSYRHLLYVLAQFIHDGLLIKSKKGYLIKN 197 L NR+AA++L QE + A+YLGV+ L VLA+ +G ++ + I + Sbjct: 152 LKNRIAAYLLEHQEIR----NQQEVADYLGVARPSLARVLAELAQEGSVLFENRRVTIAD 207 Query: 198 RKQLSG 203 + +L Sbjct: 208 QAKLEK 213 >UniRef50_Q3A4H0 Transcriptional regulator, Crp/Fnr family n=1 Tax=Pelobacter carbinolicus DSM 2380 RepID=Q3A4H0_PELCD Length = 224 Score = 141 bits (357), Expect = 1e-32, Method: Composition-based stats. Identities = 39/211 (18%), Positives = 73/211 (34%), Gaps = 4/211 (1%) Query: 4 SAFKDCFLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDF 63 + D L D++ R ++ + EG + F G+ +++ +GR ++ Sbjct: 14 AGVTDKDLDDLTGIARRQKYVKGQMVFSEGDDATGFFIPIEGKVKIFKLSPDGRERILRI 73 Query: 64 FAAPCFIGEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKN 123 E + D P QAIE+ L P + LL + + +S Sbjct: 74 AHPGRTFAEAAIFDVGVFPAYAQAIEDSVLLFFPKQAILNLLHCNAQLAINMIGGISRIL 133 Query: 124 YRNIVSLTQNQSFPLVNRLAAFILLSQEGDLYHEKH----TQAAEYLGVSYRHLLYVLAQ 179 + + + +RLA ++L E + TQ A L + L L + Sbjct: 134 RELMDHMESLTFKDVPSRLARYLLDLSEMKQREVRLPVSKTQLAANLNTAGETLSRSLRK 193 Query: 180 FIHDGLLIKSKKGYLIKNRKQLSGLALEMDP 210 + L+ + I N + L LA + Sbjct: 194 MSDENLIAVRGRNIEILNFQGLLDLAAKYKE 224 >UniRef50_C1A7L5 Crp family transcriptional regulator n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1A7L5_GEMAT Length = 229 Score = 141 bits (356), Expect = 2e-32, Method: Composition-based stats. Identities = 39/196 (19%), Positives = 71/196 (36%), Gaps = 5/196 (2%) Query: 15 SADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDFFAAPCFIGEIE 74 + TR F IV EG L+ + G ++ +GR ++ GE+ Sbjct: 30 AEVTREQRFAKGALIVSEGDAGDALYVVRSGEVKVVLVGDDGREVILQVLGVGDHFGELA 89 Query: 75 LIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKNYRNIVSLTQNQ 134 LID V A L L +R + + +L V LS + + ++ Sbjct: 90 LIDGRPRSAHVVATHASSLLVLRRPEFRRQVEQNPKVAWELMVELSRRLRQADGTIGSLV 149 Query: 135 SFPLVNRLAAFILLSQEGD-----LYHEKHTQAAEYLGVSYRHLLYVLAQFIHDGLLIKS 189 + R+A +L + H A+ +G S + +++F G+++ Sbjct: 150 LLDVPGRVAKVLLEHATPGEPASLVKQLTHQTIAQMIGASRETVSRAMSEFQDQGMIMVQ 209 Query: 190 KKGYLIKNRKQLSGLA 205 ++ I NR L A Sbjct: 210 RRVVTIVNRGALESRA 225 >UniRef50_C2XKA0 Transcriptional regulator n=2 Tax=Bacillaceae RepID=C2XKA0_BACCE Length = 182 Score = 140 bits (354), Expect = 3e-32, Method: Composition-based stats. Identities = 38/170 (22%), Positives = 73/170 (42%), Gaps = 5/170 (2%) Query: 3 ESAFKDCFLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLID 62 S + F D+ + + F ++I++ G + L++L GR + G+ L+ Sbjct: 7 RSIYHYTFTKDLISFLSVSTFQPNEFILKAGDKIDGLYFLLSGRYIVSNLEVTGKELLLR 66 Query: 63 FFAAPCFIGEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHK 122 + P +G+IE+ A+E C L +P++ Y L D+ F + L L++K Sbjct: 67 YCQQPAIMGDIEIFTDCLVESNCIAVEPCEVLFIPLEVYEAHLKFDSKFNQLLLKELAYK 126 Query: 123 NYRNIVSLTQNQSFPLVNRLAAFILLSQEGDLYHE-----KHTQAAEYLG 167 +S N P+ RLAA++ + L ++ + A + G Sbjct: 127 LRTCTISSRVNALSPVSIRLAAYLCTVESPSLLNQYIKTNSLDEVASFRG 176 >UniRef50_Q3AF29 Transcriptional regulator, Crp/Fnr family n=1 Tax=Carboxydothermus hydrogenoformans Z-2901 RepID=Q3AF29_CARHZ Length = 213 Score = 140 bits (354), Expect = 3e-32, Method: Composition-based stats. Identities = 35/195 (17%), Positives = 69/195 (35%), Gaps = 2/195 (1%) Query: 11 LTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDFFAAPCFI 70 L ++ + EG + +++L GR +LY GR ++ + Sbjct: 21 LKEIGNLLYSRRLKKGQILFSEGDPGAAVYFLKSGRIKLYKEDREGREHILHYVEPGDIF 80 Query: 71 GEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKNYRNIVSL 130 E+ L K P + IE L +P + LL L L ++ + Sbjct: 81 AEVVLFSKRPYPATAEVIEPGEVLVIPNEEMENLLKKRGEIALNLIKVLLYRLDLANQKI 140 Query: 131 TQNQSFPLVNRLAAFILLSQEGDLYHEKHTQAAEYLGVSYRHLLYVLAQFIHDGLLIKSK 190 + + R+ + +L + G + + + A GVS ++ +F G+L Sbjct: 141 KELALKDSLARVCSVLL--RYGPVINLSQQEIANLAGVSRETASRIINEFKRLGVLRAEG 198 Query: 191 KGYLIKNRKQLSGLA 205 + I N +L + Sbjct: 199 RSLEIINYDKLKDFS 213 >UniRef50_Q7N3E6 Similar to transcription regulator n=2 Tax=Photorhabdus RepID=Q7N3E6_PHOLL Length = 220 Score = 140 bits (353), Expect = 4e-32, Method: Composition-based stats. Identities = 44/208 (21%), Positives = 81/208 (38%), Gaps = 6/208 (2%) Query: 1 MSESAFKDCFLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSL 60 + + F + + Y+ + + L+ L G+ ++ NG+ S+ Sbjct: 5 IDKYHLDSIFPAEFMPKLDVVEIKKNTYLTHQSSIFTHLYILVEGKLKVEFYNVNGKFSV 64 Query: 61 IDFFAAPCFIGEIELI--DKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVT 118 F IG++EL D+ V A E L++P++ R L D FL+ +C Sbjct: 65 FAFATPLFLIGDLELFHAQGDNIINTVFAQERSVLLSIPLETVRIFGLTDVGFLQFVCKQ 124 Query: 119 LSHKNYRNIVSLTQNQSFPLVNRLAAFILLSQEGD---LYHEKHTQAAEYLGVSYRHLLY 175 LS+K + + + + ++L F+ + + L EK A LGVS R L Sbjct: 125 LSNKLFESSL-FRTGIFLTVEDKLKRFLYYHSKRNGTVLVLEKREDLASVLGVSVRQLNR 183 Query: 176 VLAQFIHDGLLIKSKKGYLIKNRKQLSG 203 + G+++ K I + L Sbjct: 184 AIKSLNEKGIIVSKNKRVDIIDYDFLKK 211 >UniRef50_Q3M891 Transcriptional regulator, Crp/Fnr family n=2 Tax=Cyanobacteria RepID=Q3M891_ANAVT Length = 231 Score = 140 bits (353), Expect = 4e-32, Method: Composition-based stats. Identities = 33/206 (16%), Positives = 70/206 (33%), Gaps = 6/206 (2%) Query: 5 AFKDCFLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDFF 64 D L ++ + + + I EG + + F + GR +++ G+ + F Sbjct: 22 DLLDEQLQALANIAIVQTYKKGEIIFWEGDEGTGFFIVKSGRVKIFKVANGGKEQIFHIF 81 Query: 65 AAPCFIGEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKNY 124 A + E+ D + P + A+E + +P + +L + TL+ Sbjct: 82 GAEEYFAEVPAFDGGNYPASAAALENSQVVFIPRSSFLTVLQQHPTLALAILGTLARHLR 141 Query: 125 RNIVSLTQNQSFPLVNRLAAFILLSQEGD------LYHEKHTQAAEYLGVSYRHLLYVLA 178 + + + RLA ++L + Q A LG L L Sbjct: 142 KLTHLVDTLSFQEVPQRLANYLLNLSKRLGNADVVELDLPKGQLAALLGTIPETLSRALY 201 Query: 179 QFIHDGLLIKSKKGYLIKNRKQLSGL 204 + + ++ + +R +L L Sbjct: 202 KLAQEKIIEMEGTTVRLCDRDRLINL 227 >UniRef50_C0QQT2 Transcription regulator n=1 Tax=Persephonella marina EX-H1 RepID=C0QQT2_PERMH Length = 208 Score = 139 bits (352), Expect = 4e-32, Method: Composition-based stats. Identities = 42/199 (21%), Positives = 85/199 (42%), Gaps = 3/199 (1%) Query: 6 FKDCFLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDFFA 65 D ++ + + +++ D I EG P + F+L G ++Y T NG +++ Sbjct: 10 LTDKEISYLKSISKIKEKKEGDIIFWEGDDPKYTFFLIEGVVKIYKTSNNGNDITLNYIL 69 Query: 66 APCFIGEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKNYR 125 P FIGE +I P + + + K + + F+R++ + L++K + Sbjct: 70 PPSFIGEFAVIKGMKYPISAEMESNGRLIVFETKGLTKFIEKNKNFMREIIIYLANKIEK 129 Query: 126 NIVSLTQNQSFPLVNRLAAFILLSQEGDLYHEKHTQAAEYLGVSYRHLLYVLAQFIHDGL 185 N ++A FI E + KHT+ A L ++ L L + ++GL Sbjct: 130 NYSYCEDLMEKNAKKKVAKFI-KEHEDLFFSLKHTKIASILNITPETLSRTLRELKNEGL 188 Query: 186 LIKSKKGYLIKNRKQLSGL 204 +++ + + N+ +L L Sbjct: 189 IVE--RKIVKINKNKLESL 205 >UniRef50_B8FC47 Transcriptional regulator, Crp/Fnr family n=1 Tax=Desulfatibacillum alkenivorans AK-01 RepID=B8FC47_DESAA Length = 227 Score = 139 bits (352), Expect = 4e-32, Method: Composition-based stats. Identities = 38/204 (18%), Positives = 78/204 (38%), Gaps = 6/204 (2%) Query: 11 LTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDFFAAPCFI 70 L ++ + + I EG+ + + +GR ++ + G+ ++ Sbjct: 22 LDSLARIASMREYRKGAIIFFEGEYCDGFYVVAKGRVKITKISSKGKEQILYILETGEPF 81 Query: 71 GEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKNYRNIVSL 130 G++ + D P QA+E CL P + L+ + L+ ++ + + Sbjct: 82 GQLAIYHGDAFPATAQALETSVCLFFPKTPFLELISQRPALPMNMLAFLARRHRELTLQI 141 Query: 131 TQNQSFPLVNRLAAFILLS--QEGDLYHEKH----TQAAEYLGVSYRHLLYVLAQFIHDG 184 + RLA ++L ++ L Q A LG + L LA+ + DG Sbjct: 142 ENIALKEVPERLAEYLLYLCWEQKSLKTVSLPISKEQLAYLLGATPETLSRSLAKLVDDG 201 Query: 185 LLIKSKKGYLIKNRKQLSGLALEM 208 +++ K I + + L+ LA M Sbjct: 202 MIMMDGKDISIIDEESLNDLARSM 225 >UniRef50_C7LNX8 Transcriptional regulator, Crp/Fnr family n=1 Tax=Desulfomicrobium baculatum DSM 4028 RepID=C7LNX8_DESBD Length = 227 Score = 139 bits (352), Expect = 5e-32, Method: Composition-based stats. Identities = 38/207 (18%), Positives = 72/207 (34%), Gaps = 6/207 (2%) Query: 5 AFKDCFLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDFF 64 + L + + F D + EG++ + + G+ +++ +GR ++ Sbjct: 15 GLPEDELRQLERISEPREFDKGDILFLEGREGVGFYVVAAGQVKVFKMSFDGREQILHIL 74 Query: 65 AAPCFIGEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKNY 124 +GE+ + P QA+ + P + L + LS + Sbjct: 75 GPGDPLGEVPVFAGQTYPANAQALVKSSLYFFPRQKLIELYRESPSLAMNMLAVLSRRLR 134 Query: 125 RNIVSLTQNQSFPLVNRLAAFILLSQE----GDLYHEKHTQ--AAEYLGVSYRHLLYVLA 178 V + + RLA ++L Q T+ + LG S L VL Sbjct: 135 EFTVLIENLSLKEIPQRLATYLLHQQSLKPVSARVKLSVTKGVLSNILGTSQETLSRVLG 194 Query: 179 QFIHDGLLIKSKKGYLIKNRKQLSGLA 205 + +GL+ K I N ++L LA Sbjct: 195 KLSQEGLIDVQGKEISILNAERLQELA 221 >UniRef50_B0K8F6 Transcriptional regulator, Crp/Fnr family n=11 Tax=Thermoanaerobacterales RepID=B0K8F6_THEP3 Length = 225 Score = 139 bits (351), Expect = 5e-32, Method: Composition-based stats. Identities = 33/211 (15%), Positives = 82/211 (38%), Gaps = 10/211 (4%) Query: 4 SAFKDCFLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDF 63 + +D L ++ + F I EG++ ++++ G+ ++ T + G+ +I Sbjct: 14 NELEDKSLEEIHKILIIKSFKKGSIIFMEGEKGEAIYFVKSGKVKISKTSSVGKEHIIKI 73 Query: 64 FAAPCFIGEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKN 123 E L P +AIE+ + L + L+L ++ + ++ + Sbjct: 74 MEEGDIFAESVLFVGGEYPATAEAIEDSEVIMLKNQDIENLILKNSKIALSIIKLMAKRL 133 Query: 124 YRNIVSLTQNQSFPLVNRLAAFILLSQEGDLYHEK----------HTQAAEYLGVSYRHL 173 V + + R A+ +L + + K A +G S ++ Sbjct: 134 KNVAVIIENLALRDSIGRTASVLLTFAKERGINTKEGILLNLNLNRQDLANIVGTSRENV 193 Query: 174 LYVLAQFIHDGLLIKSKKGYLIKNRKQLSGL 204 +L+Q +G++ ++ +IK+ ++L + Sbjct: 194 TRILSQMDKEGIIHLDRQKIIIKDIERLKEM 224 >UniRef50_B6BLA3 Transcription regulator n=1 Tax=Campylobacterales bacterium GD 1 RepID=B6BLA3_9PROT Length = 210 Score = 139 bits (351), Expect = 6e-32, Method: Composition-based stats. Identities = 39/199 (19%), Positives = 77/199 (38%), Gaps = 7/199 (3%) Query: 6 FKDCFLTDVSADTRL---FHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLID 62 FKD + +L + + EG +L+ L G +LY T +N + ++ Sbjct: 11 FKDLDDDTIQRIEKLTTEHTISKDNIVFYEGDDSKYLYLLVHGIIKLYKTSSNHKEIVLK 70 Query: 63 FFAAPCFIGEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHK 122 +F IGE+ ++ P +A + L + + ++ ++ + +L K Sbjct: 71 YFHENELIGEVANFEQIPYPATAKAYTDVEILKIDFSSLKEIIYSNPELSFIIQTSLIKK 130 Query: 123 NYRNIVSLTQNQSFPLVNRLAAFILLSQEGDLYHEKHTQAAEYLGVSYRHLLYVLAQFIH 182 V ++ N R+A +I + D + K+ AE L VS L +L F Sbjct: 131 IKNLEVIISTNLVLDSKERVAKYI-YNHTDDFFTTKNIIIAEILSVSPETLSRILKFFKD 189 Query: 183 DGLLIKSKKGYLIKNRKQL 201 ++ K +++ L Sbjct: 190 HDIIDIKSKRI---DKEAL 205 >UniRef50_Q21SN7 Transcriptional regulator, Crp/Fnr family n=1 Tax=Rhodoferax ferrireducens T118 RepID=Q21SN7_RHOFD Length = 233 Score = 138 bits (349), Expect = 9e-32, Method: Composition-based stats. Identities = 32/199 (16%), Positives = 68/199 (34%), Gaps = 9/199 (4%) Query: 14 VSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDFFAAPCFIGEI 73 + + + A + G P ++ + G R+ NG+ +++ +P + GEI Sbjct: 32 LLVNAEIRTIAAGQRLFARGDAPDGIYCVLTGVVRVTGITENGQEAILAMLESPQWFGEI 91 Query: 74 ELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKNYRNIVSLTQN 133 L D + A + L + + +L R L+ K V++ Sbjct: 92 ALFDNEPRTHDAWAESDAKLLRVSQRALEKMLSERPDDWRHFGRLLTQKLRSVFVAMEDI 151 Query: 134 QSFPLVNRLAAFILLSQEG---------DLYHEKHTQAAEYLGVSYRHLLYVLAQFIHDG 184 P RLA +L +G + Q L +S + + L + G Sbjct: 152 FLLPPTARLARRLLSMAKGYGAWTDHTSRVISISQEQLGLMLSLSRQTVNQSLRELEDAG 211 Query: 185 LLIKSKKGYLIKNRKQLSG 203 + + + + + ++L Sbjct: 212 SIHRHRGSIEMVDLRKLEA 230 >UniRef50_A6LCQ3 cAMP-binding domain transcriptional regulator n=3 Tax=Bacteroidales RepID=A6LCQ3_PARD8 Length = 214 Score = 138 bits (349), Expect = 9e-32, Method: Composition-based stats. Identities = 43/190 (22%), Positives = 82/190 (43%), Gaps = 6/190 (3%) Query: 17 DTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDFFAAPCFIGEIELI 76 D F D++ ++G S L+ L++GR + +G + ++ +AP + L Sbjct: 25 DYSTRSFKKGDWVARQGDALSSLYLLSKGRVKTEMITESGTILEVETLSAPTPLASAFLF 84 Query: 77 -DKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKNYRNIVSLTQNQS 135 + + P V A+EEC + +P LL + FL+ +++ L Sbjct: 85 AENNRFPVDVIALEECEIILIPKSAVMRLLATNEHFLQSYMAFNANRTQFLSERLQLLSI 144 Query: 136 FPLVNRLAAFILLSQEGDLYHE--KHTQAAEYLGVSYRHLLYVLAQFIHDGLLIKSKKGY 193 + +LA +IL +GD Y + T+ +EY GV+ L ++ I +G + + K Sbjct: 145 KTIKGKLAYYILKRIQGDHYKQDRNQTELSEYFGVARPSLARSFSEMIEEGAISREGK-- 202 Query: 194 LIKNRKQLSG 203 I + +L Sbjct: 203 -IVDMNKLKS 211 >UniRef50_B2A710 Transcriptional regulator, Crp/Fnr family n=1 Tax=Natranaerobius thermophilus JW/NM-WN-LF RepID=B2A710_NATTJ Length = 243 Score = 138 bits (349), Expect = 1e-31, Method: Composition-based stats. Identities = 32/215 (14%), Positives = 66/215 (30%), Gaps = 11/215 (5%) Query: 4 SAFKDCFLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDF 63 S + L +S L F I G ++Y+ G+ ++ +GR ++ Sbjct: 29 SHLTEDELNSISKLAYLREFPGGSVIFYHGDPGEAMYYVKDGKVKIVKDDFDGREQILHI 88 Query: 64 FAAPCFIGEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKN 123 E+ + D P + +E+ + + L K+ + + Sbjct: 89 MKPGDIFAEVVVFDDGPYPATAEVMEDTVVGVITKERLENHLHEHPTIAIKIMKLMGKRL 148 Query: 124 YRNIVSLTQNQSFPLVNRLAAFIL-LSQEGDL----------YHEKHTQAAEYLGVSYRH 172 + + R I L +E D H + A G S Sbjct: 149 RKAQSKVADLALRDTYQRTINIIYNLMEEDDCAFCSEKQEIAITATHQELASMAGTSRET 208 Query: 173 LLYVLAQFIHDGLLIKSKKGYLIKNRKQLSGLALE 207 + VL+ +G++ K + + +L +E Sbjct: 209 VTRVLSTLKKEGIIKTDKGYIAVTDPVKLKDKVIE 243 >UniRef50_C7PII7 Transcriptional regulator, Crp/Fnr family n=1 Tax=Chitinophaga pinensis DSM 2588 RepID=C7PII7_CHIPD Length = 236 Score = 138 bits (349), Expect = 1e-31, Method: Composition-based stats. Identities = 34/194 (17%), Positives = 75/194 (38%), Gaps = 9/194 (4%) Query: 21 FHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDFFAAPCFIGEIELIDKDH 80 + + QEG P ++ + G+ +L +GR ++ IG L+ + Sbjct: 39 TTYKKGQIVFQEGAYPFGIYCVNTGKIKLSHCGDDGREQIVRLAKPGDIIGYKALLSAER 98 Query: 81 EPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKNYRNIVSLTQNQSFPLVN 140 + A+++ +P + +L D ++ L+ + + + +T P+ Sbjct: 99 YTASAIALDDSSVCFIPKDLFMSVLQKDASLSLEMMRILASELRKAEMKITHLAQKPVRE 158 Query: 141 RLAAFILLSQE---------GDLYHEKHTQAAEYLGVSYRHLLYVLAQFIHDGLLIKSKK 191 RLA +L +E + A +G + + +L++F DGL+ K Sbjct: 159 RLAETLLFIRETYGVEQDGSTLNVRLSREEIANLVGTATESAIRLLSEFKKDGLIELQGK 218 Query: 192 GYLIKNRKQLSGLA 205 + N ++L+ A Sbjct: 219 KIRLLNPEELTRTA 232 >UniRef50_P74678 DNR protein n=1 Tax=Synechocystis sp. PCC 6803 RepID=P74678_SYNY3 Length = 238 Score = 137 bits (346), Expect = 2e-31, Method: Composition-based stats. Identities = 37/225 (16%), Positives = 75/225 (33%), Gaps = 17/225 (7%) Query: 4 SAFKDCFLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDF 63 L ++A ++ + D + +EG +P F + GR ++Y G+ ++ Sbjct: 18 QNIDSHHLEMITAIAQVKSYGKGDVVFKEGDKPKGFFIVRSGRVKIYKIAPGGKEQILRI 77 Query: 64 FAAPCFIGEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKN 123 F EI + D P + +++ + P + +L + +LS Sbjct: 78 FHRGEHFAEIAVFDNLPFPASAATLDQAEMIFFPRSPFLEMLAQHPTLALNMLSSLSRHL 137 Query: 124 YRNIVSLTQNQSFPLVNRLAAFILLSQEGD-----------LYHEKHTQAAEYLGVSYRH 172 + + + RLA+++L D +Q A LG Sbjct: 138 RHLTAVIEELSFKDVPQRLASYLLRLGGVDTGTVEVLSLWVTLDLPKSQLAAQLGTIPAT 197 Query: 173 LLYVLAQFIHDGLLIKSKKGYLIKNRKQLSGLALEMDPENKFSGM 217 L Q ++ L+ + + +L LA + GM Sbjct: 198 LSRAFYQLKNEDLIAVKGAEIQLLDCDRLRALA------KRGDGM 236 >UniRef50_Q7M956 PUTATIVE TRANSCRIPTIONAL REGULATOR n=1 Tax=Wolinella succinogenes RepID=Q7M956_WOLSU Length = 217 Score = 137 bits (346), Expect = 3e-31, Method: Composition-based stats. Identities = 34/200 (17%), Positives = 81/200 (40%), Gaps = 1/200 (0%) Query: 4 SAFKDCFLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDF 63 SA ++ L + + ++ + + + EG++P+ L+ L +G ++Y T G +I + Sbjct: 14 SALEEERLDYLQSFSKKLSYQEGNILFFEGEKPNHLYVLLKGILKIYKTDPRGNEVVIHY 73 Query: 64 FAAPCFIGEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKN 123 P + E+ ++ + P + + LA+ + L + + +L+ K Sbjct: 74 IQPPSLVAELVNLEGMNYPASAIFESDGEILAIDYAIFERDFLKNGDMAFYIIKSLTRKI 133 Query: 124 YRNIVSLTQNQSFPLVNRLAAFILLSQEGDLYHEKHTQAAEYLGVSYRHLLYVLAQFIHD 183 +T N + +R+A F E +L + A L + L ++ + + Sbjct: 134 KALEEVITSNLTMDTTSRVAKFFYDKSE-ELPCLSQRKIASILNTTPETLSRIVKKLKEE 192 Query: 184 GLLIKSKKGYLIKNRKQLSG 203 ++ K + N+ +L Sbjct: 193 KIITVEKGSIIEVNKGRLKE 212 >UniRef50_C7PGE5 Transcriptional regulator, Crp/Fnr family n=2 Tax=Sphingobacteriales RepID=C7PGE5_CHIPD Length = 230 Score = 136 bits (344), Expect = 4e-31, Method: Composition-based stats. Identities = 35/202 (17%), Positives = 88/202 (43%), Gaps = 8/202 (3%) Query: 14 VSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDFFAAPCFIGEI 73 ++A + F + + +EG+ + ++++ G+ +++ G+ ++ F +G Sbjct: 27 LAAHRQHLTFKKGELLFREGEPVNGIYFVNAGKVKVHKHWGEGKELIVRFAKDGDIVGHR 86 Query: 74 ELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKNYRNIVSLTQN 133 + + P + A+E + M ++ L + FL+ L + + + + ++ Sbjct: 87 GVGSEMVYPVSATALEAVNICFIDMTFFQATLKVNHDFLQALMMFYATELQESEKNMRNL 146 Query: 134 QSFPLVNRLAAFIL-------LSQEGDL-YHEKHTQAAEYLGVSYRHLLYVLAQFIHDGL 185 P+ R+A +L +++EG + A Y G +Y +++ I + + Sbjct: 147 VHMPVKGRIAHALLNLQRKFGVNEEGYINMTLSRQDIASYTGTTYETAFRIMSDLIQEHI 206 Query: 186 LIKSKKGYLIKNRKQLSGLALE 207 +I S K +K+ +L+ L LE Sbjct: 207 IIISGKSIAVKDPARLARLELE 228 >UniRef50_A0NZG3 CAMP-binding protein-catabolite gene activator and regulatory subunit of cAMP-dependent protein kinase n=1 Tax=Labrenzia aggregata IAM 12614 RepID=A0NZG3_9RHOB Length = 234 Score = 136 bits (342), Expect = 7e-31, Method: Composition-based stats. Identities = 50/218 (22%), Positives = 76/218 (34%), Gaps = 11/218 (5%) Query: 8 DCFLTDVSADTR-LFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDFFAA 66 D D+ + + A I G +P L + G R++ + A GR + Sbjct: 16 DEGSLDLLTRLSTIARYEAESAIFAAGDEPDGLRVIITGSIRIWISDAEGRELTLALLEP 75 Query: 67 PCFIGEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKNYRN 126 GEI ++DK A+ CL LP L F L L RN Sbjct: 76 GDPFGEISVLDKLPRTANASALANSECLFLPKDAMEIALDKSPQFAHHLIQLLCEILRRN 135 Query: 127 IVSLTQNQSFPLVNRLAAFILLSQ--------EGDLYHEKHT--QAAEYLGVSYRHLLYV 176 ++ L RLA +L +G + K + + A LGV+ L Sbjct: 136 TEAMGAFAFLGLDGRLAQKLLDLALSYADLKDDGAKFKRKFSQNELAHMLGVTREALNKR 195 Query: 177 LAQFIHDGLLIKSKKGYLIKNRKQLSGLALEMDPENKF 214 L HDGL+ + I N + L+ A + N+ Sbjct: 196 LNALAHDGLITLTNGLISIPNLEALATRARAAERLNRG 233 >UniRef50_Q5NXU3 Catabolite gene activator (CAMP receptor protein) (CAMP-regulatory protein) n=4 Tax=Rhodocyclaceae RepID=Q5NXU3_AZOSE Length = 223 Score = 135 bits (341), Expect = 8e-31, Method: Composition-based stats. Identities = 28/201 (13%), Positives = 71/201 (35%), Gaps = 6/201 (2%) Query: 4 SAFKDCFLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDF 63 D L VS + +V G++ +++ + G ++ + +GR ++ Sbjct: 19 QGLSDDTLATVSRLAMMRRIPRGQSVVHAGERCDFVYLVLTGSLKVVVSDEDGREVILTI 78 Query: 64 FAAPCFIGEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKN 123 GE+ + + V A+ + + +R +L + ++ L+ + Sbjct: 79 LGQGELFGEMSMFGEQPRSATVVAVMPSDLVMIAKNDFRTILQGNFEVAWRIMANLADRL 138 Query: 124 YRNIVSLTQNQSFPLVNRLAAFILLSQEG------DLYHEKHTQAAEYLGVSYRHLLYVL 177 + + R+A +L E + A+ +G S + V+ Sbjct: 139 RSADRKIESLALMDVYGRVARLLLEMSEEVNGAVVVVRKITKQDIAKMIGASREMVSRVM 198 Query: 178 AQFIHDGLLIKSKKGYLIKNR 198 GL+ ++ G ++++R Sbjct: 199 KDLAAQGLIEETGAGIVLRDR 219 >UniRef50_D1CAF8 Transcriptional regulator, Crp/Fnr family n=1 Tax=Sphaerobacter thermophilus DSM 20745 RepID=D1CAF8_SPHTD Length = 252 Score = 135 bits (341), Expect = 8e-31, Method: Composition-based stats. Identities = 34/194 (17%), Positives = 68/194 (35%), Gaps = 10/194 (5%) Query: 23 FLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDFFAAPCFIGEIELIDKDHEP 82 + + + G+ + L+ + G+ +L G+ L+D F G + + P Sbjct: 54 YQPGETVYLAGEPATRLYVVAVGKVKLVRPTPAGQNVLLDILTPGDFFGSLATLGDREYP 113 Query: 83 RAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKNYRNIVSLTQNQSFPLVNRL 142 +A C L++ + +L ++ + + + P+ RL Sbjct: 114 NTAEAQTACCLLSVDADQFAEILRAYPTVALATLEIVAERLRDAHEVIEHLSAHPVEARL 173 Query: 143 AAFIL--------LSQEGDLYH--EKHTQAAEYLGVSYRHLLYVLAQFIHDGLLIKSKKG 192 AA +L S+ G L AE G + VL++F GL+ ++ Sbjct: 174 AATLLKLADRLGEESEHGLLIQMPLSRQDLAEMTGTTTETASRVLSEFRRAGLIRSGRRW 233 Query: 193 YLIKNRKQLSGLAL 206 I + L+ A Sbjct: 234 VAITDPAGLAKFAE 247 >UniRef50_C9YCU2 Putative uncharacterized protein n=1 Tax=Curvibacter putative symbiont of Hydra magnipapillata RepID=C9YCU2_9BURK Length = 238 Score = 135 bits (341), Expect = 9e-31, Method: Composition-based stats. Identities = 43/208 (20%), Positives = 72/208 (34%), Gaps = 14/208 (6%) Query: 10 FLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANG---RVSLIDFFAA 66 F + R+ H A + + P L+ + RG R+ G R +++ + Sbjct: 28 FAQGLLDMARVRHLQAGEKLFLRDAAPCGLYAVVRGTIRISGHSGEGDGAREAVLVLLSP 87 Query: 67 PCFIGEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKNYRN 126 P + GEI + D A E C L +P + L R L V ++ K Sbjct: 88 PQWFGEISVFDGSARTHDAHAAEPCTLLHIPHEELLAWLTQHPAHWRDLAVLMADKLRLA 147 Query: 127 IVSLTQNQSFPLVNRLAAFILLSQ-----------EGDLYHEKHTQAAEYLGVSYRHLLY 175 VS+ + P RLA +L + Q A +GVS + Sbjct: 148 FVSMEEQTVLPAPQRLARRLLTMALSYGQATESDRTLRVLVVTQEQLALMIGVSRQTTNQ 207 Query: 176 VLAQFIHDGLLIKSKKGYLIKNRKQLSG 203 +L F G+L + + + + L Sbjct: 208 ILRDFKARGVLHVQRGCIELLDLQALRA 235 >UniRef50_A6Q6Z4 Transcriptional regulator, Crp/Fnr family n=1 Tax=Sulfurovum sp. NBC37-1 RepID=A6Q6Z4_SULNB Length = 233 Score = 135 bits (340), Expect = 1e-30, Method: Composition-based stats. Identities = 40/202 (19%), Positives = 81/202 (40%), Gaps = 4/202 (1%) Query: 4 SAFKDCFLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDF 63 SA +L ++ T + + + EG + +L L G +LY T G I+ Sbjct: 11 SALTGTYLKELYDQTHIKQYAKDSIVFYEGDESKYLHILLDGNIKLYKTTPKGTQIQINR 70 Query: 64 FAAPCFIGEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKN 123 AAP IGE + P + + + LP L ++ F ++ +L+ K Sbjct: 71 LAAPAMIGEYACFENQPFPATCEFLTDGVMGLLPFDFVYKHL-DNPGFSLEIIKSLTGKV 129 Query: 124 YRNIVSLTQNQSFPLVNRLAAFILLSQEGDLYH-EKHTQAAEYLGVSYRHLLYVLAQFIH 182 + + ++A L++Q+ L+ K+ + A L ++ +L +F Sbjct: 130 ALLSALVHKETVLSSEAKVAD--LMTQKLPLFQRLKNNEIASMLNLTPETFSRILTKFKK 187 Query: 183 DGLLIKSKKGYLIKNRKQLSGL 204 +G++ + +I N + L + Sbjct: 188 EGIITVKNQKIIILNEEALYNI 209 >UniRef50_A9BMG5 Transcriptional regulator, Crp/Fnr family n=7 Tax=cellular organisms RepID=A9BMG5_DELAS Length = 278 Score = 134 bits (339), Expect = 1e-30, Method: Composition-based stats. Identities = 46/218 (21%), Positives = 78/218 (35%), Gaps = 18/218 (8%) Query: 4 SAFKDCFLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANG---RVSL 60 A + A + A D++ + G P L+ + RG + T A G R +L Sbjct: 55 HALPPELGAQLKALAQPRTLAAGDWLFRRGDPPCGLYAVARGALSISGTAACGEQARTAL 114 Query: 61 IDFFAAPCFIGEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLS 120 + P ++GEI L D QA C L +P + L + L + L+ Sbjct: 115 LTLVEPPMWLGEIALFDGAERTHDAQAATACTVLHVPQAPLQAWLAAHPEHWQVLALLLT 174 Query: 121 HKNYRNIVSLTQNQSFPLVNRLAAFILLSQEG---------------DLYHEKHTQAAEY 165 K +++L ++ P RLA ++ EG Q A Sbjct: 175 DKLRVCLMALEEHTLLPAPQRLARRLVRMAEGFDQWQPDGQGRQRWRRELDVSQEQLARM 234 Query: 166 LGVSYRHLLYVLAQFIHDGLLIKSKKGYLIKNRKQLSG 203 LG+S + +L + G L + + +R+ L Sbjct: 235 LGLSRQTTNQILQELQQAGCLQLRRGKMEVLDRQGLRD 272 >UniRef50_A0XZU1 Transcriptional regulator, Crp/Fnr family protein n=1 Tax=Alteromonadales bacterium TW-7 RepID=A0XZU1_9GAMM Length = 222 Score = 134 bits (339), Expect = 1e-30, Method: Composition-based stats. Identities = 30/197 (15%), Positives = 74/197 (37%), Gaps = 4/197 (2%) Query: 14 VSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDFFAAPCFIGEI 73 + A ++ A+ + G ++ + G R+ +NG+ +++ F A + GE+ Sbjct: 26 LLAHGKVLTLKAQQALFLRGDAHDGIYVVLSGVMRISGVNSNGKEAVLSFIDASLWFGEV 85 Query: 74 ELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKNYRNIVSLTQN 133 L DK V A + +P + LL + ++ + L+ K S+ + Sbjct: 86 TLFDKGLRTHDVYAQTDAQLFYVPQRSLEQLLSKHPEYWQEFGLLLAQKLRLMFSSMEDH 145 Query: 134 QSFPLVNRLAAFILLSQEGDLYH----EKHTQAAEYLGVSYRHLLYVLAQFIHDGLLIKS 189 ++ +L+ E + Q A+ ++ + + +L + + + Sbjct: 146 ALHSAEQKVCNRLLMLSEQTNFSAPLALSQQQLADMTYLTRQTINQILQKLVKKNAISLG 205 Query: 190 KKGYLIKNRKQLSGLAL 206 + + + +L LA Sbjct: 206 YQCITVLDVSKLQALAS 222 >UniRef50_C3XLC9 Putative uncharacterized protein n=4 Tax=Helicobacter RepID=C3XLC9_9HELI Length = 202 Score = 134 bits (339), Expect = 2e-30, Method: Composition-based stats. Identities = 37/181 (20%), Positives = 75/181 (41%), Gaps = 7/181 (3%) Query: 21 FHFLARDYIVQEGQQPSWLFYLTRGRARLYATLAN-----GRVSLIDFFAAPCFIGEIEL 75 F + + EG+ P LF L G+ R+Y ++ R + + +P F+ E+ Sbjct: 24 RFFNKDEILFFEGENPKKLFILLNGKVRIYKSIQPIKDIAPREKTLHYITSPSFLAEMPS 83 Query: 76 IDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKNYRNIVSLTQNQS 135 + K P + E+C L + ++ ++ + F ++L +L K R + +L Sbjct: 84 LLKQPFPASAICTEDCEVLEISLEAFQKQCTENPHFCQQLIASLCQK-IRILETLIMESH 142 Query: 136 FPLVNRLAAFILLSQEGDLYHEKHTQAAEYLGVSYRHLLYVLAQFIHDGLLIKSKKGYLI 195 L ++L +F L +L + A++L S L + + G + K ++ Sbjct: 143 LSLKDKLMSF-LQENTQNLNTLTQREIAKHLNTSPESLSRTIRELKTQGRIETKKGKIIL 201 Query: 196 K 196 K Sbjct: 202 K 202 >UniRef50_D1TDT1 Putative transcriptional regulator, Crp/Fnr family n=1 Tax=Burkholderia sp. CCGE1002 RepID=D1TDT1_9BURK Length = 280 Score = 134 bits (337), Expect = 2e-30, Method: Composition-based stats. Identities = 39/205 (19%), Positives = 76/205 (37%), Gaps = 7/205 (3%) Query: 8 DCFLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDFFAAP 67 + + + S R F R+++V +G S L L GR ++ A +GR +DF Sbjct: 51 NEVIEETSRHIRYRRFSKREFVVHKGDAGSSLLMLMSGRLQVIALSEDGREVGLDFVEPG 110 Query: 68 CFIGEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKNYRNI 127 + GE+ +ID ++ AI E LP + L + + L L + Sbjct: 111 DYFGELSIIDGGPRSASIIAITESVVGFLPKHQAQALFYRNPAVVEALLQRLCRTIRQAS 170 Query: 128 VSLTQNQSFPLVNRLAAFI---LLSQEGDLYH----EKHTQAAEYLGVSYRHLLYVLAQF 180 + R+ + + + + G L A VS + + Sbjct: 171 NYRSMLGLTRAYARVYSVLEASMRTSAGGLLTIENLPNQQAIAIMANVSRETVSRAIRSL 230 Query: 181 IHDGLLIKSKKGYLIKNRKQLSGLA 205 I ++ + + +++N + L+ LA Sbjct: 231 IDGEVIERDYRRLIVRNAEMLAKLA 255 >UniRef50_C7PAL9 Transcriptional regulator, Crp/Fnr family n=2 Tax=Sphingobacteriales RepID=C7PAL9_CHIPD Length = 352 Score = 134 bits (337), Expect = 2e-30, Method: Composition-based stats. Identities = 37/202 (18%), Positives = 83/202 (41%), Gaps = 8/202 (3%) Query: 11 LTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDFFAAPCFI 70 L + + + + I QEG +P+ L+++ +GR + Y +G+ ++ ++A F+ Sbjct: 149 LKTLMEEGNTDRYKKKQLIYQEGNRPTSLYFIQKGRVKTYKVNNDGKELAVNLYSAGEFL 208 Query: 71 GEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKNYRNIVSL 130 G + L++ + +A+E C A+P + + L+ N+ ++ L+ L Sbjct: 209 GYVALLEGSNYHENAEALEACELTAIPREDFETLINNNREVAQQFIRLLAKNITEKEQQL 268 Query: 131 TQNQSFPLVNRLAAFIL--------LSQEGDLYHEKHTQAAEYLGVSYRHLLYVLAQFIH 182 L ++A +L ++ + A G + ++ L F Sbjct: 269 LHLAYSSLRKKVAEALLFLKKKYHHVTDQPFSIDISRENLATIAGTATESMIRTLGDFRD 328 Query: 183 DGLLIKSKKGYLIKNRKQLSGL 204 + LL + I N ++L+ L Sbjct: 329 EKLLEIKQGVITILNEQKLANL 350 >UniRef50_B8HYC6 Transcriptional regulator, Crp/Fnr family n=2 Tax=Cyanobacteria RepID=B8HYC6_CYAP4 Length = 236 Score = 133 bits (336), Expect = 3e-30, Method: Composition-based stats. Identities = 38/203 (18%), Positives = 74/203 (36%), Gaps = 6/203 (2%) Query: 11 LTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDFFAAPCFI 70 L +++ + + + I +G + + F + GR +++ A GR ++ F + Sbjct: 29 LVELAKLAIVQCYDRGEIIFHQGDEGTGFFLVRSGRVKIFKLSAEGREQILHFLGEKDYF 88 Query: 71 GEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKNYRNIVSL 130 E+ +D P + A+E+ L P + + LL L + + + Sbjct: 89 AEVPALDGQCFPASAAALEQSELLFFPRQAFLQLLEQQPTLTINLLKSFARHLRHFSHLI 148 Query: 131 TQNQSFPLVNRLAAFILLSQEGD------LYHEKHTQAAEYLGVSYRHLLYVLAQFIHDG 184 + RLA ++L E Q A LG L V A+ G Sbjct: 149 DSLVLHEVPARLAIYLLSLSEKTGQAETVELDLPKGQLAARLGTVPETLSRVFAKLGRAG 208 Query: 185 LLIKSKKGYLIKNRKQLSGLALE 207 L+ + +RK+L+ + E Sbjct: 209 LIEIDGSRVKLLDRKRLNQIVTE 231 >UniRef50_B5EPN3 Transcriptional regulator, Crp/Fnr family n=6 Tax=Acidithiobacillus RepID=B5EPN3_ACIF5 Length = 246 Score = 133 bits (336), Expect = 3e-30, Method: Composition-based stats. Identities = 41/208 (19%), Positives = 76/208 (36%), Gaps = 6/208 (2%) Query: 4 SAFKDCFLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDF 63 SA+ + + + A ++ + + + EG ++L GR L A A G+ +++ Sbjct: 36 SAWPNDMIAPLLAQSQPLTLESGEILFAEGSPARSFYFLAVGRINLIAAAATGQEKIVEI 95 Query: 64 FAAPCFIGEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKN 123 E P QA L +P+ + L L +R++ LS + Sbjct: 96 IQPDDLFAEAVAFLGGRYPVTAQADATTTVLEIPLDLFVATLEQRPLLMRQMLARLSMRL 155 Query: 124 YRNIVSLTQNQSFPLVNRLAAFILL------SQEGDLYHEKHTQAAEYLGVSYRHLLYVL 177 + + L RLA+++L S K A LG++ L VL Sbjct: 156 HFLVKELRHLSVESAEQRLASYLLELCPVVNSPAAIELPAKKAAVAARLGLTPETLSRVL 215 Query: 178 AQFIHDGLLIKSKKGYLIKNRKQLSGLA 205 ++ GL+ ++ I + L A Sbjct: 216 SRMRKAGLIEVEQRTISIPDPLALRRWA 243 >UniRef50_UPI000197CA44 hypothetical protein PretD1_04436 n=1 Tax=Providencia rettgeri DSM 1131 RepID=UPI000197CA44 Length = 222 Score = 133 bits (336), Expect = 3e-30, Method: Composition-based stats. Identities = 47/205 (22%), Positives = 88/205 (42%), Gaps = 9/205 (4%) Query: 4 SAFKDCFLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDF 63 + +L +Y++ + + +++++L G+ ++ NG+ + F Sbjct: 17 YQLDKILSEETIKSAKLLRIDTSEYLISQNDKINFIYFLVVGKLQVERYEINGKHVIFSF 76 Query: 64 FAAPCFIGEIELIDKDHEPR-----AVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVT 118 A IG++EL ++ +QAI EC+ LA P++ + LN +FL+ +C Sbjct: 77 ENAFSVIGDLELFQNNNSKNNRIYSTIQAITECYLLAFPLQVIQKKELNSPIFLQFICQH 136 Query: 119 LSHKNYRNIVSLTQNQSFPLVNRLAAFIL--LSQEGDLYH-EKHTQAAEYLGVSYRHLLY 175 LS K + L + SF +L +++ SQ G + E A LG+S R L Sbjct: 137 LSKKLFNASQ-LHSSSSFSAEYKLRRYLIFAESQYGSEFKLENRDSLAAMLGISVRQLNR 195 Query: 176 VLAQFIHDGLLIKSKKGYLIKNRKQ 200 L + I L+ K I + + Sbjct: 196 TLVKLIERKLIELKGKHIKIIDLES 220 >UniRef50_B8CZ46 Putative transcriptional regulator, Crp/Fnr family n=1 Tax=Halothermothrix orenii H 168 RepID=B8CZ46_HALOH Length = 219 Score = 133 bits (336), Expect = 3e-30, Method: Composition-based stats. Identities = 34/206 (16%), Positives = 77/206 (37%), Gaps = 9/206 (4%) Query: 4 SAFKDCFLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDF 63 S D L + + T + A + + EG +P + + G ++ +G+ +++ Sbjct: 13 SGLNDEQLDLLKSITNKRRYKAGEILFFEGDKPDAFYIVVEGEIQIIKVSYDGKEKILEV 72 Query: 64 FAAPCFIGEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKN 123 F GE+ +ID + I + L + + + L+ K+ LS + Sbjct: 73 MGPGDFFGEMAIIDSKGRSATARVIRDSSLLVVGNQEFLNLVREYPFIALKIIGELSRRL 132 Query: 124 YRNIVSLTQNQSFPLVNRLAAF-------ILLSQEGDLY--HEKHTQAAEYLGVSYRHLL 174 + + + RL F I + E + + H A ++G S + Sbjct: 133 RQANQDIESLAFLDVETRLKKFFRRMTGEIRDNGEAVVIDRNITHQDIARFIGTSRETVT 192 Query: 175 YVLAQFIHDGLLIKSKKGYLIKNRKQ 200 ++ + GLL ++ ++K+ + Sbjct: 193 RIINKLKDKGLLEIKREKIILKDINK 218 >UniRef50_B7GKB9 Transcriptional regulator, Crp family n=13 Tax=Bacillaceae RepID=B7GKB9_ANOFW Length = 241 Score = 133 bits (336), Expect = 4e-30, Method: Composition-based stats. Identities = 36/210 (17%), Positives = 73/210 (34%), Gaps = 10/210 (4%) Query: 4 SAFKDCFLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDF 63 S D L + + + + +G Q +F++ RG ++Y T +G+ ++ Sbjct: 30 SQLSDEELNAIVHIATVRTCKPKTLVFMQGDQLDRVFFIVRGTVKIYKTDVSGKEQIVSI 89 Query: 64 FAAPCFIGEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKN 123 + P + + E + +PM+ + L+ KL + K Sbjct: 90 LHEGEMFPHTGFFRRGTYPAHAEIMNETTLIVIPMEQFEQTLMCYPQLCIKLFRIMGEKI 149 Query: 124 YRNIVSLTQNQSFPLVNRLAA-FILLSQEGDLY---------HEKHTQAAEYLGVSYRHL 173 L + +LA FI L++ +Y + A +G + + Sbjct: 150 IELQTRLEELVFHNTAEQLARLFIRLAKTSGVYVKGRYRLKATLTTRELANMIGTARETV 209 Query: 174 LYVLAQFIHDGLLIKSKKGYLIKNRKQLSG 203 VL+Q G++ GY I + + L Sbjct: 210 SRVLSQMKQQGVVTTDDDGYYIIDVEALQQ 239 >UniRef50_A6Q5Z4 Transcriptional regulator, Crp/Fnr family n=1 Tax=Nitratiruptor sp. SB155-2 RepID=A6Q5Z4_NITSB Length = 212 Score = 133 bits (335), Expect = 4e-30, Method: Composition-based stats. Identities = 37/200 (18%), Positives = 80/200 (40%), Gaps = 1/200 (0%) Query: 4 SAFKDCFLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDF 63 + D + + L + + EG+ L LT+G ++Y + G ++ Sbjct: 11 NNLDDKQFQRLKEISVLKQYKKGSIVFYEGEIAKHLILLTKGILQIYKSDHKGNKIVLHV 70 Query: 64 FAAPCFIGEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKN 123 F P I EI ++ P + + + + L + K + L + + +L++K Sbjct: 71 FYPPNLIAEIVNFEQIPYPASGEFLTDGELLLIDYKIFEEEFLKNPEIAFTIIKSLTNKI 130 Query: 124 YRNIVSLTQNQSFPLVNRLAAFILLSQEGDLYHEKHTQAAEYLGVSYRHLLYVLAQFIHD 183 +T + R+A FI +E + K + A L ++ L ++++F Sbjct: 131 RYLEHVITNDLVLSSTARVAKFIYEHEE-EFMDLKKNEIATLLNITPETLSRIISKFKKL 189 Query: 184 GLLIKSKKGYLIKNRKQLSG 203 GLL K++ Y + +++ Sbjct: 190 GLLEKNRSQYRVLKKEEFRS 209 >UniRef50_A8ZKF0 Cyclic nucleotide-binding domain n=2 Tax=Acaryochloris marina MBIC11017 RepID=A8ZKF0_ACAM1 Length = 230 Score = 133 bits (335), Expect = 4e-30, Method: Composition-based stats. Identities = 34/195 (17%), Positives = 73/195 (37%), Gaps = 4/195 (2%) Query: 14 VSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDFFAAPCFIGEI 73 ++ ++ F + I Q+ + +++ GR +++ A G+ +++ F ++ Sbjct: 28 LTQTAQIQPFKKGEQIFHPDQEATGFYFVKSGRVKVFQMSAKGKEQILNIFTEGDNFADV 87 Query: 74 ELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKNYRNIVSLTQN 133 +D P + A+E + P + L ++ ++ V+L + Q Sbjct: 88 PALDGQSFPASAAALEPADLIFFPRYPFLDFLHHNPDVAVQMLVSLFSHLRHLAQLVEQL 147 Query: 134 QSFPLVNRLAAFIL----LSQEGDLYHEKHTQAAEYLGVSYRHLLYVLAQFIHDGLLIKS 189 + RLA ++L + Q A LG L Q DG++ S Sbjct: 148 SFKSVPQRLATYLLSLGDTVSDTVYLDLTKGQLAARLGTIPATLSRAFYQLSSDGMIAIS 207 Query: 190 KKGYLIKNRKQLSGL 204 I +R +L+ L Sbjct: 208 GSKVTILDRDRLTVL 222 >UniRef50_C6C034 Transcriptional regulator, Crp/Fnr family n=1 Tax=Desulfovibrio salexigens DSM 2638 RepID=C6C034_DESAD Length = 226 Score = 133 bits (335), Expect = 5e-30, Method: Composition-based stats. Identities = 33/191 (17%), Positives = 65/191 (34%), Gaps = 5/191 (2%) Query: 21 FHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDFFAAPCFIGEIELIDKDH 80 + I G + + + G+ ++Y G+ +I F A GE+ + Sbjct: 31 RELKKGEQIFSAGGDATGFYSIKSGKVKIYRESLAGKEQIIHIFGAGEIFGEVPVFQGAC 90 Query: 81 EPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKNYRNIVSLTQNQSFPLVN 140 P + + + L P + ++ D + LS + + + + + Sbjct: 91 YPASSVTLAKSKLLYFPRDSFERVIREDPDLAMSMLALLSGRLRQLVNQVAALSLSEVPA 150 Query: 141 RLAAFILL-----SQEGDLYHEKHTQAAEYLGVSYRHLLYVLAQFIHDGLLIKSKKGYLI 195 RLA+++LL + A YLG L V + GL+ +K I Sbjct: 151 RLASYLLLLKSTQNSNILELDLPKGLIASYLGTIQETLSRVFKKMSEQGLIKVERKTIEI 210 Query: 196 KNRKQLSGLAL 206 + L +A Sbjct: 211 IDEASLELIAS 221 >UniRef50_B6IXV7 Transcriptional regulator, Crp n=1 Tax=Rhodospirillum centenum SW RepID=B6IXV7_RHOCS Length = 235 Score = 133 bits (334), Expect = 5e-30, Method: Composition-based stats. Identities = 42/211 (19%), Positives = 73/211 (34%), Gaps = 10/211 (4%) Query: 5 AFKDCFLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDFF 64 + V A ++ F + I +G L+ + RGR ++ + +V L++ Sbjct: 24 ILDAAEMEAVLAFAQVRRFAPDERIFTKGDPGDCLYAILRGRVAVHTESEDAKVMLLNTL 83 Query: 65 AAPCFIGEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKNY 124 AA GEI ++D V A E L + + + P L +L L + Sbjct: 84 AAGEVFGEIAMLDGGERTATVTAAEPADLLRIDRRDFLPFLEARPNLCIRLMTVLCERLR 143 Query: 125 RNIVSLTQNQSFPLVNRLAAFILLSQEGD----------LYHEKHTQAAEYLGVSYRHLL 174 + + RLA IL+ + + A+ LGVS + Sbjct: 144 WTSAIIEDTVFLNVPRRLAKRILMLAQSEGRQTPDGIRIATFVSQDALAKMLGVSREIVN 203 Query: 175 YVLAQFIHDGLLIKSKKGYLIKNRKQLSGLA 205 L F DG + ++ + L LA Sbjct: 204 KTLKSFQADGAIAYRSGYLIVHDTAYLEKLA 234 >UniRef50_Q6AL49 Probable transcription regulator (Fnr-like) n=1 Tax=Desulfotalea psychrophila RepID=Q6AL49_DESPS Length = 222 Score = 133 bits (334), Expect = 6e-30, Method: Composition-based stats. Identities = 32/209 (15%), Positives = 77/209 (36%), Gaps = 5/209 (2%) Query: 4 SAFKDCFLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDF 63 + L ++ T+ + E + + + GR ++Y A G+ ++ Sbjct: 14 AGLPGEQLAQLATITKEISVKRGTSLFFEQDPGNGFYLIVSGRVKVYKISAGGKEQILHI 73 Query: 64 FAAPCFIGEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKN 123 GE + P +++ + L P + + L+ ++ L + K Sbjct: 74 LKDLETFGEAAVFQGKPFPANGESLVDTELLYFPREKFVSLIERNSQLALNLLAIFATKL 133 Query: 124 YRNIVSLTQNQSFPLVNRLAAF-ILLSQEGDLYHEKHT----QAAEYLGVSYRHLLYVLA 178 + + + +RLA + +LL++E D + Q A LG + L + Sbjct: 134 RKFTRQVEALSLQEVPHRLAKYLLLLTEEQDSLSLRLEISKGQLASLLGTAPETLSRIFG 193 Query: 179 QFIHDGLLIKSKKGYLIKNRKQLSGLALE 207 QF +G+++ + + ++ +L + Sbjct: 194 QFASEGIIVIHGRAIEVVDKGKLKEKVED 222 >UniRef50_Q67K68 Putative cyclic nucleotide-binding transcriptional regulator n=1 Tax=Symbiobacterium thermophilum RepID=Q67K68_SYMTH Length = 223 Score = 133 bits (334), Expect = 6e-30, Method: Composition-based stats. Identities = 40/205 (19%), Positives = 76/205 (37%), Gaps = 5/205 (2%) Query: 4 SAFKDCFLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDF 63 D L ++A R H+ + EG ++++ +GR R+ ANG+ ++ Sbjct: 14 QGLSDEELARIAAIARERHYRKGTILFNEGDPGEAIYFIKKGRVRVSRLAANGQEQVLRV 73 Query: 64 FAAPCFIGEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKN 123 + +G + L DK P Q E+ +A + LL + + Sbjct: 74 WGPGHEVGLVVLADKAPYPATAQVTEDSVLIAFRVDDLVQLLPESRTLAANAFCLVGRRL 133 Query: 124 YRNIVSLTQNQSFPLVNRLAAFIL---LSQEGDLYHE--KHTQAAEYLGVSYRHLLYVLA 178 + + RLAA +L Q D+ + H + A +G S + VL Sbjct: 134 RLARDTAHELAVHNTHGRLAALLLRMKAEQGSDVINLGMTHQEIAGMIGTSRETVTRVLG 193 Query: 179 QFIHDGLLIKSKKGYLIKNRKQLSG 203 F G + + +I++ ++L Sbjct: 194 DFRRTGCIAVQGESVVIRDERKLRE 218 >UniRef50_A8MIF1 Transcriptional regulator, Crp/Fnr family n=1 Tax=Alkaliphilus oremlandii OhILAs RepID=A8MIF1_ALKOO Length = 229 Score = 133 bits (334), Expect = 6e-30, Method: Composition-based stats. Identities = 45/205 (21%), Positives = 76/205 (37%), Gaps = 4/205 (1%) Query: 4 SAFKDCFLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDF 63 ++ + +++ F + I G + LF L GR ++ NG+ +I Sbjct: 21 ASMNHDEMLEIAHIASSRTFEKGETIYGAGDEGGTLFVLYSGRIKISRFNVNGKEQVIRI 80 Query: 64 FAAPCFIGEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKN 123 FIGE+ L QA+E L + L+ K+ LS + Sbjct: 81 VGPGEFIGELSLFSSLPLTDHAQALETSTVCVLEGARLKELMTKYASIAFKILDELSRRL 140 Query: 124 YRNIVSLTQNQSFPLVNRLAAFIL-LSQEGDLYHEKHT--QAAEYLGVSYRHLLYVLAQF 180 + + + R+A +L LS+E + T A +G++ L L F Sbjct: 141 EKAENLIENISLSTVTQRVAQVLLELSEEQNEILLNMTKGDLASQIGMTQETLSRKLGAF 200 Query: 181 IHDGLLIKSK-KGYLIKNRKQLSGL 204 +GL+ K IKNR+ L L Sbjct: 201 QEEGLIELVGHKRIRIKNRQGLEKL 225 >UniRef50_Q5P8X7 Transcriptional regulator, Dnr type n=9 Tax=Bacteria RepID=Q5P8X7_AZOSE Length = 259 Score = 132 bits (333), Expect = 8e-30, Method: Composition-based stats. Identities = 34/187 (18%), Positives = 64/187 (34%), Gaps = 11/187 (5%) Query: 28 YIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDFFAAPCFIGEIELIDKDHEPRAVQA 87 + +G + G+ +L T A G +I+ GE + QA Sbjct: 68 VVFHKGDPCHGFHLVLAGQVKLAFTSAEGHEKVIEIILPGQTFGEAVMFMDKPYVVMAQA 127 Query: 88 IEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKNYRNIVSLTQNQSFPLVNRLAAFIL 147 + +C L + + D +F RK+ LSH+ + I + R+ ++L Sbjct: 128 LTDCKLLHISKSVVFDEMDRDPVFCRKIIAGLSHRLHHLIADVETYSLRSGRERIVGYLL 187 Query: 148 LSQEGD-----------LYHEKHTQAAEYLGVSYRHLLYVLAQFIHDGLLIKSKKGYLIK 196 +E D A L ++ H +L + I GL+ + I Sbjct: 188 RQEEIDGEPRTNGYVSVRLPTSKGTIASRLNLTQEHFSRILHELIEAGLICVEGRTIHIP 247 Query: 197 NRKQLSG 203 + ++L Sbjct: 248 DIEKLRT 254 >UniRef50_Q2T0J6 Transcriptional regulator, putative n=61 Tax=Proteobacteria RepID=Q2T0J6_BURTA Length = 266 Score = 132 bits (332), Expect = 9e-30, Method: Composition-based stats. Identities = 38/207 (18%), Positives = 75/207 (36%), Gaps = 11/207 (5%) Query: 21 FHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDFFAAPCFIGEIELIDKDH 80 A + + G P L+ + G + A A+G+ +L+ + GEI L D+ Sbjct: 36 RRLAAGQVLFRRGDAPCGLYAVLSGALSVGAVDASGKEALLTVAEPMTWFGEIALFDELP 95 Query: 81 EPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKNYRNIVSLTQNQSFPLVN 140 A+E+ + +P + LL + R L + ++ K + +++ P Sbjct: 96 RTHDAIALEDALLMHVPQAALQQLLDETPRYWRYLALLMAQKLRMSFMNVEALTLMPAAQ 155 Query: 141 RLAAFILLSQEG--------DLYHEKHTQAAEYLGVSYRHLLYVLAQFIHDGLLIKSKKG 192 RLAA +L+ EG + L +S + +L + G++ Sbjct: 156 RLAARLLMIAEGYGGISTRHRRIRLSQERLGAMLSLSRQTANQLLKELAARGVVRLHVGE 215 Query: 193 YLIKNRKQLSG---LALEMDPENKFSG 216 I + L A + + +G Sbjct: 216 IEIVDLNALRAASGAAHRAEDDLAGAG 242 >UniRef50_B3RC77 Putative cyclic nucleotide-binding regulatory protein n=1 Tax=Cupriavidus taiwanensis RepID=B3RC77_CUPTR Length = 239 Score = 132 bits (332), Expect = 1e-29, Method: Composition-based stats. Identities = 40/206 (19%), Positives = 78/206 (37%), Gaps = 7/206 (3%) Query: 7 KDCFLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDFFAA 66 D L ++ A+ R+ F R+++V G L L GR ++ A +GR +DF Sbjct: 17 DDETLLELQAEIRIQRFRKREFVVHHGAAGDSLMMLLSGRLQVIALAEDGREVGLDFVEP 76 Query: 67 PCFIGEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKNYRN 126 + GE+ +ID ++ A + LP + + L N + L L + + Sbjct: 77 GDYFGELSIIDGLPRSASIVASVDSLVGFLPRQKAKWLFYNHPSVIETLLQKLCNTIRQA 136 Query: 127 IVSLTQNQSFPLVNRLAAFILL---SQEGDLYH----EKHTQAAEYLGVSYRHLLYVLAQ 179 + +R+ A ++ + G+L A VS + + Sbjct: 137 SSYRSMLGMNRAYSRVYAILMSAARNPTGNLVTIENLPNQQGIAIMANVSRETVSRAIHA 196 Query: 180 FIHDGLLIKSKKGYLIKNRKQLSGLA 205 + G++ K + +++ L LA Sbjct: 197 LVSTGIVQKDLRRLIVREPVILEKLA 222 >UniRef50_Q2W4U7 cAMP-binding protein-catabolite gene activator and regulatory subunit of cAMP-dependent protein kinase n=2 Tax=Magnetospirillum RepID=Q2W4U7_MAGSA Length = 239 Score = 132 bits (332), Expect = 1e-29, Method: Composition-based stats. Identities = 40/204 (19%), Positives = 73/204 (35%), Gaps = 10/204 (4%) Query: 11 LTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDFFAAPCFI 70 L +++A ++ AR+ + +G L+ + +G R+ A+GR Sbjct: 32 LDELAAKAKMVKVDARETLFSKGDPGDRLYLVAKGLIRIGVLSADGREVTYGLIKPGQLF 91 Query: 71 GEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKNYRNIVSL 130 GEI ++D A+E +AL K L L L + R L Sbjct: 92 GEIAVLDGKERSADATAMEATELIALERKDVHTFLHRHPAQALHLIEVLCERIRRADNQL 151 Query: 131 TQNQSFPLVNRLAAFILL----------SQEGDLYHEKHTQAAEYLGVSYRHLLYVLAQF 180 L +RLA +L+ + A++LG+S + VL+++ Sbjct: 152 EDMVFLSLPSRLAKHLLMLVQTMGTKAKPGTPSAIKLSQQEIADHLGISRESVNKVLSKW 211 Query: 181 IHDGLLIKSKKGYLIKNRKQLSGL 204 G++ + + L GL Sbjct: 212 EQAGIVTLGRGQITLNKTAALEGL 235 >UniRef50_B5YAP2 Cyclic nucleotide-binding:Bacterial regulatory protein, Crp n=2 Tax=Dictyoglomus RepID=B5YAP2_DICT6 Length = 225 Score = 131 bits (331), Expect = 1e-29, Method: Composition-based stats. Identities = 37/209 (17%), Positives = 73/209 (34%), Gaps = 10/209 (4%) Query: 5 AFKDCFLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDFF 64 F D L + + + I Q+ ++ F + GR ++ G+ ++ Sbjct: 15 DFSDDELEKLLLICKEKSYPKDSIIFQKEDPGNFFFLICSGRVKVIIETEEGKEGILAIL 74 Query: 65 AAPCFIGEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKNY 124 F GE+ L+D + V A+EE + + + LL K+ TLS + Sbjct: 75 YPTEFFGEMSLLDGEPRSATVVALEETNVIIIERNEFLSLLYKHPELALKILKTLSLRLR 134 Query: 125 RNIVSLTQNQSFPLVNRLAAFILLSQEGD----------LYHEKHTQAAEYLGVSYRHLL 174 + + R+A ++ + +GVS + Sbjct: 135 KANRQIETLMFLDASGRIARLLIDIARDRGKKVDEGVLIDLEFTRQELGNLIGVSRETTI 194 Query: 175 YVLAQFIHDGLLIKSKKGYLIKNRKQLSG 203 +L F +G+L + +IK+ K+L Sbjct: 195 RILKSFEEEGILSIERNHIIIKDIKELER 223 >UniRef50_A7NPI1 Transcriptional regulator, Crp/Fnr family n=1 Tax=Roseiflexus castenholzii DSM 13941 RepID=A7NPI1_ROSCS Length = 223 Score = 131 bits (331), Expect = 1e-29, Method: Composition-based stats. Identities = 37/187 (19%), Positives = 59/187 (31%), Gaps = 4/187 (2%) Query: 21 FHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDFFAAPCFIGEIELIDKDH 80 A + + G L+ L GR RL GR +I + + D Sbjct: 32 VRHTAGEMLFLAGDPSPGLYVLLSGRVRLSRLSPGGREQVIHIVEPGHHFNSVPVFDGGP 91 Query: 81 EPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKNYRNIVSLTQNQSFPLVN 140 P A + L P R L+L + +L R + + + Sbjct: 92 CPVNAAAQTDIIALLFPGDRLRALILEHPVVALRLLADSCGYLRRLVDLVDDLALTTVQG 151 Query: 141 RLAAFILLSQE----GDLYHEKHTQAAEYLGVSYRHLLYVLAQFIHDGLLIKSKKGYLIK 196 RLA +L E G + ++ A LG + L F GL+ + +I Sbjct: 152 RLARLLLTQAEAGERGVVQPLTQSEIAARLGTVREMVGRSLKTFEAMGLIRIERGTIIII 211 Query: 197 NRKQLSG 203 +R L Sbjct: 212 DRAALER 218 >UniRef50_Q023C9 Transcriptional regulator, Crp/Fnr family n=2 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q023C9_SOLUE Length = 236 Score = 131 bits (330), Expect = 2e-29, Method: Composition-based stats. Identities = 38/208 (18%), Positives = 75/208 (36%), Gaps = 5/208 (2%) Query: 4 SAFKDCFLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDF 63 +A + L ++ F + + EG+ +F + +G +++ T GR ++ Sbjct: 26 AALSENELQGLAQRAVEKRFGTDEMLFWEGEACVGIFLIIQGSVKIFRTSPGGREVMLCI 85 Query: 64 FAAPCFIGEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKN 123 AP + E+ L D P +V+ E L + ++ + K+ + + Sbjct: 86 ETAPASVAELPLFDGGPYPASVRVTEPVVSLFINKSDFQQFCRQNPDVALKVLAVVGRRL 145 Query: 124 YRNIVSLTQNQSFPLVNRLAAFILLSQ-----EGDLYHEKHTQAAEYLGVSYRHLLYVLA 178 + + + + RLA +L + E H + A LG + L Sbjct: 146 RQLVGLVEAMTFGSVTQRLAKMLLDASKEAGPEDFDLPATHQELASRLGTVREVISRNLG 205 Query: 179 QFIHDGLLIKSKKGYLIKNRKQLSGLAL 206 +F GL+ + I NR L A Sbjct: 206 RFRAQGLIKIQDRQVEIVNRAGLQQEAE 233 >UniRef50_D1PKF6 Putative cyclic nucleotide-binding domain protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PKF6_9FIRM Length = 214 Score = 131 bits (329), Expect = 2e-29, Method: Composition-based stats. Identities = 39/195 (20%), Positives = 74/195 (37%), Gaps = 6/195 (3%) Query: 1 MSESAFKDCFLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSL 60 ++++ + F T + + I Q+ + ++ G R++ +G S Sbjct: 14 VAQAGIRQYFSTPDLQFFA-CRYKKGEIITAPDQKLDTILFVIEGTVRIFGIRPDGTTSP 72 Query: 61 IDFFAAPCFIGEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLS 120 ++ P +G+IE + P QA + C+ LP+K Y L D FL L + + Sbjct: 73 VNQQTPPVILGDIEFSQQGTRPFFTQATTDVLCIGLPVKPYEKELHRDLRFLHALLHSYA 132 Query: 121 HKNYRNIVSLTQNQSFPLVNRLAAFILLSQEGDLYHEKHTQAA-EYLGVSYRHLLYVLAQ 179 K + + L R+ ++ + + A L S R L VL + Sbjct: 133 EKL--QFFAFVDAPAETLEERVLLYLKNFCPNHEFTG--IEMAVSRLRCSRRQLQRVLQK 188 Query: 180 FIHDGLLIKSKKGYL 194 +G + K KG+ Sbjct: 189 LCTNGTIQKVGKGHY 203 >UniRef50_Q89HD2 Bll6060 protein n=3 Tax=Bradyrhizobium RepID=Q89HD2_BRAJA Length = 242 Score = 131 bits (329), Expect = 2e-29, Method: Composition-based stats. Identities = 30/203 (14%), Positives = 67/203 (33%), Gaps = 7/203 (3%) Query: 11 LTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDFFAAPCFI 70 L + + I +G + LF + G ++ ++ +GR ++++ Sbjct: 34 LDQLCRYAKHTTVKRGATIAAKGDPGNNLFAVISGTVKISSSSPDGRNAILNLIGPGEIF 93 Query: 71 GEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKNYRNIVSL 130 GEI ++D A C + + + P + + K L + + Sbjct: 94 GEIAVLDGAPRSADATANTNCELYIIDRRDFLPFVKSQPALAMKFIELLCARLRWTSQQV 153 Query: 131 TQNQSFPLVNRLAAFILLSQEGDLYHE-------KHTQAAEYLGVSYRHLLYVLAQFIHD 183 Q L RLA+ +L E + + +E +G++ + L + Sbjct: 154 EQVILQNLPGRLASALLGLTEERKFDSGSGTLAITQQEISEMVGMTRESINKQLRAWAGR 213 Query: 184 GLLIKSKKGYLIKNRKQLSGLAL 206 + ++ + L LA Sbjct: 214 NWVRLEHGAIVVLDTDALRELAE 236 >UniRef50_B5VZ90 Transcriptional regulator, Crp/Fnr family n=1 Tax=Arthrospira maxima CS-328 RepID=B5VZ90_SPIMA Length = 237 Score = 131 bits (329), Expect = 2e-29, Method: Composition-based stats. Identities = 34/220 (15%), Positives = 75/220 (34%), Gaps = 17/220 (7%) Query: 4 SAFKDCFLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTR-GRARLYATLANGRVSLID 62 S + + + ++ +F + + +G +F++ + G+ +++ ANG+ ++ Sbjct: 18 SGLSESEVIPFTPIAQIPNFAKSEMVFNQGNP--EVFFIVKMGKVKVFKVSANGKEQIVH 75 Query: 63 FFAAPCFIGEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHK 122 F + E+ +D P + A+E + P + + +L L +L Sbjct: 76 IFQLGDYFAEVPALDGQPFPNSAAALEPTELVFFPRELFLKVLHQSPTVSVNLLTSLCQH 135 Query: 123 NYRNIVSLTQNQSFPLVNRLAAFILLSQEGDL--------------YHEKHTQAAEYLGV 168 + + RLAA++L D + A LG Sbjct: 136 LRELTSLIDSLSFQDVPQRLAAYLLNLSNRDFQQINSGRETDRLVTLDINKGELASLLGT 195 Query: 169 SYRHLLYVLAQFIHDGLLIKSKKGYLIKNRKQLSGLALEM 208 L A+ GL+ + I N + L + + Sbjct: 196 IPATLSRAFAKLSQKGLIAVNGSQIQIFNHQGLQEFSQSL 235 >UniRef50_Q7MRZ8 DNR n=1 Tax=Wolinella succinogenes RepID=Q7MRZ8_WOLSU Length = 212 Score = 131 bits (329), Expect = 2e-29, Method: Composition-based stats. Identities = 39/192 (20%), Positives = 76/192 (39%), Gaps = 1/192 (0%) Query: 13 DVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDFFAAPCFIGE 72 ++ L D I EG++P L+ L G +++ G +++ FF FI E Sbjct: 19 EILLMATLQRVRHGDLIFAEGEKPERLYVLIEGEVKVFKVNHKGDETILRFFHPVQFISE 78 Query: 73 IELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKN-YRNIVSLT 131 + +D P + +A + ++ ++ L+ + +L K Y V++ Sbjct: 79 LASLDNLPFPTSTKAQTDLRLATFEIESFKELMRAHIELYDFMLHSLCQKLHYHMNVTIA 138 Query: 132 QNQSFPLVNRLAAFILLSQEGDLYHEKHTQAAEYLGVSYRHLLYVLAQFIHDGLLIKSKK 191 +N A +LL KH + A+ + V+ L VL +F +G + K Sbjct: 139 KNSDNEDSYSKIALLLLEDFTSFAQTKHWKIAQSINVAPETLSRVLRRFREEGAIGGVGK 198 Query: 192 GYLIKNRKQLSG 203 + +R +L Sbjct: 199 KISLLDRSKLKK 210 >UniRef50_A4J2D4 Transcriptional regulator, Crp/Fnr family n=4 Tax=Clostridia RepID=A4J2D4_DESRM Length = 227 Score = 130 bits (328), Expect = 2e-29, Method: Composition-based stats. Identities = 36/210 (17%), Positives = 71/210 (33%), Gaps = 10/210 (4%) Query: 5 AFKDCFLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDFF 64 + + D+S+ + I EG+ L+ L G +L L +GR ++ F Sbjct: 16 GLSEEQIRDLSSLLLERSYQKGRIIFMEGEPGEALYVLKSGLIKLTKRLEDGREHILHFV 75 Query: 65 AAPCFIGEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKNY 124 E+ L + P + E+C L + L+ + + +S + Sbjct: 76 NPGEVFAEVVLFEGGDYPATAEVQEDCIVGVLRNQDIERLISQNPNMAVSMLRIMSRRLR 135 Query: 125 RNIVSLTQNQSFPLVNRLAAFILLSQ--------EGDLYHEKHT--QAAEYLGVSYRHLL 174 + RL+ +L +G L + T + A G S + Sbjct: 136 TAQEKVMNLALHDTARRLSFTLLKMSQEHGIQKNDGILININLTNQELASLTGSSRETIN 195 Query: 175 YVLAQFIHDGLLIKSKKGYLIKNRKQLSGL 204 +L F G + ++ + +R +L L Sbjct: 196 RMLNSFKRAGAIDVDRQQITVLDRNKLEDL 225 >UniRef50_C6VTE5 Transcriptional regulator, Crp/Fnr family n=1 Tax=Dyadobacter fermentans DSM 18053 RepID=C6VTE5_DYAFD Length = 354 Score = 130 bits (328), Expect = 3e-29, Method: Composition-based stats. Identities = 34/199 (17%), Positives = 76/199 (38%), Gaps = 8/199 (4%) Query: 14 VSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDFFAAPCFIGEI 73 ++ D ++ ++ I EG PS +F+L +G+ + Y + NG+ + D F G + Sbjct: 154 LAEDKKVKILRKKETIYTEGSFPSHVFFLQKGKVKAYKSNENGKEYITDLLKEGEFFGYL 213 Query: 74 ELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKNYRNIVSLTQN 133 +L+ A+E+ +P + LL + K LS++ L Q Sbjct: 214 DLLHGAPYEETAIALEKSEVAMIPKDDFFNLLQGNREVASKFIRMLSNEIKEREERLLQL 273 Query: 134 QSFPLVNRLAAFILL--------SQEGDLYHEKHTQAAEYLGVSYRHLLYVLAQFIHDGL 185 + R+A +++ + A +G + ++ L+ F + L Sbjct: 274 AYNSVRKRVAQALVMLVQRYQEDRSKPFSMAVTREDIASMVGTATETVIRTLSDFKEERL 333 Query: 186 LIKSKKGYLIKNRKQLSGL 204 + + ++L+ + Sbjct: 334 VDMKGSQITVLEYEKLARM 352 >UniRef50_A7I340 Transcription regulator n=1 Tax=Campylobacter hominis ATCC BAA-381 RepID=A7I340_CAMHC Length = 213 Score = 130 bits (328), Expect = 3e-29, Method: Composition-based stats. Identities = 38/186 (20%), Positives = 80/186 (43%), Gaps = 2/186 (1%) Query: 20 LFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDFFAAPCFIGEIELIDKD 79 + H+ + + G++ +L +L G ++Y T A + ++ APCF+ E+ + ++ Sbjct: 26 VKHYNEDEILFFAGEKSKYLLFLLSGEVKIYKTAARAKEIVLHILKAPCFVAEVAIFEEM 85 Query: 80 HEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKNYRNIVSLTQNQSFPLV 139 P + + L + + ++ +L ++S K ++ + Sbjct: 86 EFPASAVFTKSGEILKIDYEKFKANFFCKQEICLELLRSVSKKVCAIEGFVSDSLILSAE 145 Query: 140 NRLAAFILLSQEGDLYHEKHTQAAEYLGVSYRHLLYVLAQFIHDGLLIKSKKGYL-IKNR 198 + A F+L + +K TQ A L +S L +LA F + +LI K G L I++ Sbjct: 146 QKTAQFLL-NNFDKFLKQKKTQTANDLNISQETLSRILANFKKEKILITDKNGKLEIRDA 204 Query: 199 KQLSGL 204 +L + Sbjct: 205 AELEKI 210 >UniRef50_C6XZK0 Response regulator receiver n=3 Tax=Bacteroidetes RepID=C6XZK0_PEDHD Length = 352 Score = 130 bits (327), Expect = 3e-29, Method: Composition-based stats. Identities = 32/197 (16%), Positives = 72/197 (36%), Gaps = 6/197 (3%) Query: 14 VSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDFFAAPCFIGEI 73 + AD ++ + + I EG ++ + G+ + +GR L + A + G Sbjct: 154 MIADRKVRNVKKKQVIYYEGDAVQGIYLVLTGKVKTIKLSEDGRELLTGLYNAEEYFGIP 213 Query: 74 ELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKNYRNIVSLTQN 133 L+ + +A+E+ LP + LL ++ LS+ L Q Sbjct: 214 ALLGHEPYAETAEALEDTTVCLLPKEMVEALLNKYPDVAKEFIRILSNNLRSKEEQLLQL 273 Query: 134 QSFPLVNRLAAFILLSQEGD------LYHEKHTQAAEYLGVSYRHLLYVLAQFIHDGLLI 187 + R+A ++ + + A G++ + +L+ F +GL+ Sbjct: 274 AYHSVRKRMAEVLIRLCKQEKSGAVLNLKISRDNLAAMAGMATETVSRILSDFRDEGLIE 333 Query: 188 KSKKGYLIKNRKQLSGL 204 K ++ + +L + Sbjct: 334 KKGSQIIVTDELKLQQM 350 >UniRef50_Q0K2Z3 Transcriptional regulator, CRP-family n=3 Tax=Cupriavidus RepID=Q0K2Z3_RALEH Length = 234 Score = 129 bits (326), Expect = 4e-29, Method: Composition-based stats. Identities = 33/198 (16%), Positives = 67/198 (33%), Gaps = 2/198 (1%) Query: 10 FLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDFFAAPCF 69 L V+ R F + I G P++ + GR R+ GR S+ + Sbjct: 35 VLDAVANAARRLRFGDGEMIFARGDPPTYFCMVLSGRVRMSRVSTGGRESVYSVIGRGRW 94 Query: 70 IGEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKNYRNIVS 129 GEI L+D A+ + L + + +L ++ + + + Sbjct: 95 FGEISLLDGKPRTHDAFAVGNTELMVLSQRDFHRILAAHPEGMQLIVQQICARLRVAFDH 154 Query: 130 LTQNQSFPLVNRLAAFILLSQE--GDLYHEKHTQAAEYLGVSYRHLLYVLAQFIHDGLLI 187 P+ R+AA +L + + + + S + + L + GL+ Sbjct: 155 AQSAAQAPIDARMAARLLELADRTDHVVRISAEDLGDMVNRSRQTVAKYLQAWEDAGLIR 214 Query: 188 KSKKGYLIKNRKQLSGLA 205 + + + + L LA Sbjct: 215 REYRQIELLDPAALKRLA 232 >UniRef50_P0A2T7 Catabolite gene activator n=270 Tax=Gammaproteobacteria RepID=CRP_KLEAE Length = 210 Score = 129 bits (326), Expect = 5e-29, Method: Composition-based stats. Identities = 29/198 (14%), Positives = 72/198 (36%), Gaps = 10/198 (5%) Query: 8 DCFLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDFFAAP 67 D L + + + ++ ++ +G++ L+Y+ +G + G+ ++ + Sbjct: 9 DPTLEWFLSHCHIHKYPSKSTLIHQGEKAETLYYIVKGSVAVLIKDEEGKEMILSYLNQG 68 Query: 68 CFIGEIELIDK-DHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKNYRN 126 FIGE+ L ++ V+A C + K +R L+ + L +L ++ + Sbjct: 69 DFIGELGLFEEGQERSAWVRAKTACEVAEISYKKFRQLIQVNPDILMRLSSQMARRLQVT 128 Query: 127 IVSLTQNQSFPLVNRLAAFIL---------LSQEGDLYHEKHTQAAEYLGVSYRHLLYVL 177 + + R+A +L +G + + +G S + +L Sbjct: 129 SEKVGNLAFLDVTGRIAQTLLNLAKQPDAMTHPDGMQIKITRQEIGQIVGCSRETVGRIL 188 Query: 178 AQFIHDGLLIKSKKGYLI 195 L+ K ++ Sbjct: 189 KMLEDQNLISAHGKTIVV 206 >UniRef50_Q15QG5 Transcriptional regulator, Crp/Fnr family n=1 Tax=Pseudoalteromonas atlantica T6c RepID=Q15QG5_PSEA6 Length = 230 Score = 129 bits (326), Expect = 5e-29, Method: Composition-based stats. Identities = 35/199 (17%), Positives = 62/199 (31%), Gaps = 10/199 (5%) Query: 18 TRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDFFAAPCFIGEIELID 77 +L + Q+ L+ + G+ RL G+ ++ + + GEI L D Sbjct: 31 AKLKRLDTGQLVYQKHDLGDGLYCVMSGKVRLSNVTLEGKELILTWMQPGNWFGEISLFD 90 Query: 78 KDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKNYRNIVSLTQNQSFP 137 A E C L + + ++ LL+ L + + + S Sbjct: 91 GLPRAHDAYADEPCELLKISSQDFKALLIERPTLYPHFMRLLCQRIRTTFSFIDETGSLS 150 Query: 138 LVNRLAAFILLSQEGDLYH----------EKHTQAAEYLGVSYRHLLYVLAQFIHDGLLI 187 L +L ILL EG + A L S + + +L + G++ Sbjct: 151 LKGKLCGRILLFAEGLEHQAPIENGSSLCISQESLALMLHSSRQTVNKLLQELQQQGVIK 210 Query: 188 KSKKGYLIKNRKQLSGLAL 206 I L L Sbjct: 211 VHYGKITIVQHTMLKTLCQ 229 >UniRef50_O05689 Catabolite gene activator n=9 Tax=Gammaproteobacteria RepID=CRP_PASMU Length = 209 Score = 129 bits (325), Expect = 6e-29, Method: Composition-based stats. Identities = 30/205 (14%), Positives = 73/205 (35%), Gaps = 10/205 (4%) Query: 1 MSESAFKDCFLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSL 60 M + D L + + + ++ ++ G++ L+YL +G + +G+ + Sbjct: 1 MQTTPSIDPTLEWFLSHCHIHKYPSKSTLIHAGEKAETLYYLIKGSVAVLVKDEDGKEMI 60 Query: 61 IDFFAAPCFIGEIELIDKDH-EPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTL 119 + + + F GE L ++ ++A C + K +R L+ + L L L Sbjct: 61 LTYLSQGDFFGEAGLFEEGQLRSAWIKAKSPCEIAEISYKKFRQLIQVNPDILMHLSAQL 120 Query: 120 SHKNYRNIVSLTQNQSFPLVNRLAAFIL---------LSQEGDLYHEKHTQAAEYLGVSY 170 + + ++ + R+A +L +G + + +G S Sbjct: 121 ARRLQNTSRQVSNLAFLDVTGRIAQTLLNLAKMPEAMTHPDGMQIKITRQEIGQMVGCSR 180 Query: 171 RHLLYVLAQFIHDGLLIKSKKGYLI 195 + +L L+ K ++ Sbjct: 181 ETVGRILKMLEDQHLISAHGKTIVV 205 >UniRef50_B9DSJ9 Crp family regulatory protein n=17 Tax=Firmicutes RepID=B9DSJ9_STRU0 Length = 249 Score = 129 bits (325), Expect = 7e-29, Method: Composition-based stats. Identities = 31/197 (15%), Positives = 74/197 (37%), Gaps = 6/197 (3%) Query: 4 SAFKDCFLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDF 63 + ++ + ++ R + + + +EG + L+ +++G+ R+Y +G+ L+ Sbjct: 42 NHLEEEQMDEIMKVMRSISYKKGEVVYREGDTFNALYVVSKGKIRIYRLSESGKEQLLRI 101 Query: 64 FAAPCFIGEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKN 123 F GE+ L + +A+ + + + LL K S++ Sbjct: 102 LNPGDFTGELALFRESIHEAYAEAMSDTDVCMISKNDLQEFLLKYPTISLKFLSEFSNRL 161 Query: 124 YRNIVSLTQNQSFPLVNRLAAFILLSQEGD------LYHEKHTQAAEYLGVSYRHLLYVL 177 + T+ + + +R+A F+ +GD A YLG + + Sbjct: 162 ETSEKQTTRFATEKVDSRIALFLAECLDGDEGSMEIELPMNRKDLASYLGTTPETISRKF 221 Query: 178 AQFIHDGLLIKSKKGYL 194 A F G + + + + Sbjct: 222 ADFEEAGYIKQKRNRKI 238 >UniRef50_B3QJQ9 Transcriptional regulator, Crp/Fnr family n=2 Tax=Rhodopseudomonas palustris RepID=B3QJQ9_RHOPT Length = 236 Score = 129 bits (325), Expect = 7e-29, Method: Composition-based stats. Identities = 40/215 (18%), Positives = 79/215 (36%), Gaps = 9/215 (4%) Query: 2 SESAFKD---CFLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRV 58 ++ F+D L + RL F + + +G + LF + G R+ + +GR Sbjct: 21 AQRLFQDLAPEALDQLCRAARLVRFSRGETVFLKGDDANALFVVVEGAIRVSSGSTDGRT 80 Query: 59 SLIDFFAAPCFIGEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVT 118 ++++ + GE+ ++D A + L++ + L+ + KL V Sbjct: 81 AMLNLIGSGEVFGEVAVLDGLPRTTDAIAHSDSVLLSIARRDLFELIDTQPQLMMKLIVL 140 Query: 119 LSHKNYRNIVSLTQNQSFPLVNRLAAFILLSQEGDL------YHEKHTQAAEYLGVSYRH 172 L + + + RLA I+ E D Q +E G+S Sbjct: 141 LCGRVRATSQQVEWLMLQSMSARLAGTIMRLAERDTDRAPLRLQLTQQQVSEMAGMSRES 200 Query: 173 LLYVLAQFIHDGLLIKSKKGYLIKNRKQLSGLALE 207 + +LA++ G + + I L +A E Sbjct: 201 VNKLLARWASQGWIRLGPQTLEIFQPDALRAVAGE 235 >UniRef50_P29281 Catabolite gene activator n=65 Tax=Gammaproteobacteria RepID=CRP_HAEIN Length = 224 Score = 129 bits (324), Expect = 7e-29, Method: Composition-based stats. Identities = 34/204 (16%), Positives = 71/204 (34%), Gaps = 14/204 (6%) Query: 2 SESAFKDCFLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLI 61 D FLT L + A+ ++ G+ + L+Y+ +G + + G+ ++ Sbjct: 21 QRDPVLDWFLT----HCHLHKYPAKSTLIHAGEDATTLYYVIKGSVMVSSKDDEGKEMIL 76 Query: 62 DFFAAPCFIGEIELIDKD-HEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLS 120 + A F GE L D+ V+ C + K YR L+ + L L L+ Sbjct: 77 TYLGAGQFFGEAGLFDEGSKRSAWVKTKTTCEIAEISYKKYRQLIQANPEILMFLTAQLA 136 Query: 121 HKNYRNIVSLTQNQSFPLVNRLAAFI---------LLSQEGDLYHEKHTQAAEYLGVSYR 171 + +T + R+A + + +G + + +G S Sbjct: 137 RRLQNTSRQVTNLAFLDVAGRIAQTLMNLAKQPEAMTHPDGMQIKITRQEIGQMVGCSRE 196 Query: 172 HLLYVLAQFIHDGLLIKSKKGYLI 195 + ++ L+ K ++ Sbjct: 197 TVGRIIKMLEDQNLIHAHGKTIVV 220 >UniRef50_D1B0A9 Cyclic nucleotide-binding protein n=1 Tax=Sulfurospirillum deleyianum DSM 6946 RepID=D1B0A9_SULD5 Length = 212 Score = 129 bits (324), Expect = 8e-29, Method: Composition-based stats. Identities = 39/200 (19%), Positives = 78/200 (39%), Gaps = 2/200 (1%) Query: 4 SAFKDCFLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDF 63 S L + + + + A++ + EG +P +L L +G ++Y T G+ + Sbjct: 11 SKLTAEQLEKLKKISVIKKYHAKEILFYEGDEPLYLHVLLQGTLKVYKTNHKGQQIFLHE 70 Query: 64 FAAPCFIGEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKN 123 F + E+ + P + + + L + K + ++ +L K+ Sbjct: 71 FYPGGLVAELANFENILYPATAEFMSDGEVLRIDYKALEKDFFKNPDISFEIIKSLIAKH 130 Query: 124 YRNIVSLTQNQSFPLVNRLAAFILLSQEGDLYHEKHTQAAEYLGVSYRHLLYVLAQFIHD 183 + + + ++A FIL + E K+TQ A L ++ L L++F Sbjct: 131 KILLDVIQKEVILTADAKVAKFILENSE-LFDTLKNTQIASLLNLTPETLSRTLSKFKAS 189 Query: 184 GLLIKSKK-GYLIKNRKQLS 202 GL+ K G I +R L Sbjct: 190 GLIEMDDKHGCHILDRSSLE 209 >UniRef50_D2L3L7 Transcriptional regulator, Crp/Fnr family n=1 Tax=Desulfovibrio sp. FW1012B RepID=D2L3L7_9DELT Length = 254 Score = 129 bits (324), Expect = 8e-29, Method: Composition-based stats. Identities = 38/205 (18%), Positives = 69/205 (33%), Gaps = 5/205 (2%) Query: 4 SAFKDCFLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDF 63 + L ++ + + I G + F + G+ R+Y T G+ ++ Sbjct: 14 AGLGPKELAALAGIAEVRSYAKGQDIFFSGDKALGFFSVASGKVRIYQTSLAGKEHILHV 73 Query: 64 FAAPCFIGEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKN 123 F E+ + P + QA+E+ L P + +R LL D + L+ + Sbjct: 74 FGPGEVFAEVAVFSGGVYPASAQALEDGDYLFFPRERFRRLLAEDPDLAMNMLGLLAVRL 133 Query: 124 YRNIVSLTQNQSFPLV---NRLAAFILLSQEGDLYHEKH--TQAAEYLGVSYRHLLYVLA 178 + + L + + + L Q A YLG L VL Sbjct: 134 RQLVKKLEDLSLREVPARLAAHLLLLAAESKKRLLSLGLPKGQLAAYLGTIPETLSRVLR 193 Query: 179 QFIHDGLLIKSKKGYLIKNRKQLSG 203 +F +GL+ S I + L Sbjct: 194 RFSDEGLIHLSGNTVEILDPAGLER 218 >UniRef50_B8K4D0 Putative cAMP-binding protein n=1 Tax=Vibrio parahaemolyticus 16 RepID=B8K4D0_VIBPA Length = 221 Score = 129 bits (324), Expect = 9e-29, Method: Composition-based stats. Identities = 40/194 (20%), Positives = 80/194 (41%), Gaps = 6/194 (3%) Query: 16 ADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLI-DFFAAPCFIGEIE 74 + R D+I+++ Q S +++ + + T NG+ + D+ A F GE+E Sbjct: 21 QEYRTIQVSKGDFIIKQHTQVSEVYWADNAQFSVLHTAENGKTLSLGDYHLADNFFGEME 80 Query: 75 LIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKNYRNIVSLTQNQ 134 P +V A + +A+PM + LLL D + +S+ + + Sbjct: 81 FFSDGPSPFSVVATSDVELIAIPMDKFAELLLQDGHIAFWMNHRMSNIYLNTMSIAIERS 140 Query: 135 SFPLVNRLAAFILLSQEGDLYHEKHT---QAAEYLGVSYRHLLYVLAQFIHDGLLIKS-- 189 +PL + ++ + + H+ Q A+ G + R ++ + I +GL+ K Sbjct: 141 LYPLKYNIIKDLVDRHTCNEKSQGHSYMYQEAQRFGCTERAYTRIIRELIDEGLVAKESD 200 Query: 190 KKGYLIKNRKQLSG 203 K G + N L+ Sbjct: 201 KSGVVPVNLDALTQ 214 >UniRef50_A1ZWX5 Transcriptional regulatory protein n=1 Tax=Microscilla marina ATCC 23134 RepID=A1ZWX5_9SPHI Length = 236 Score = 128 bits (323), Expect = 1e-28, Method: Composition-based stats. Identities = 35/211 (16%), Positives = 74/211 (35%), Gaps = 9/211 (4%) Query: 4 SAFKDCFLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDF 63 S L ++S+ + D I EG P LF + G+ +++ T G+ ++ Sbjct: 22 SNLDRDNLAEISSQKSCNLYRKGDVIFHEGNYPLGLFSIFSGKVKVFKTSETGKDHILRL 81 Query: 64 FAAPCFIGEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKN 123 A +G L+ + + +E+ +P + L + ++ L+ Sbjct: 82 AGAGEPLGYRSLVSGEKYEVSAAVLEDTRVCFIPKALFLNTLQGSSNLTGRVMEFLTKDL 141 Query: 124 YRNIVSLTQNQSFPLVNRLAAFILL---------SQEGDLYHEKHTQAAEYLGVSYRHLL 174 + + R+A IL+ + A +G + L+ Sbjct: 142 KLAESKIADLAQKTVKERVAETILMLKQFYGMESDHKTINVSLSREDLANLVGTATETLI 201 Query: 175 YVLAQFIHDGLLIKSKKGYLIKNRKQLSGLA 205 L++F + ++ K +I N K L +A Sbjct: 202 RSLSEFKKNEIIDLKGKKIIILNAKILEKIA 232 >UniRef50_C7RQ03 Transcriptional regulator, Crp/Fnr family n=1 Tax=Candidatus Accumulibacter phosphatis clade IIA str. UW-1 RepID=C7RQ03_9PROT Length = 241 Score = 128 bits (323), Expect = 1e-28, Method: Composition-based stats. Identities = 32/177 (18%), Positives = 65/177 (36%), Gaps = 6/177 (3%) Query: 29 IVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDFFAAPCFIGEIELIDKDHEPRAVQAI 88 IV+ G L+ L G A++ + GR ++ F GE+ LID V A Sbjct: 49 IVRAGDSTDSLYVLISGGAKVLNSDEEGREVILTLLGPGEFFGEMGLIDGSPRSADVVAT 108 Query: 89 EECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKNYRNIVSLTQNQSFPLVNRLAAFILL 148 E C L + ++ L + + +L + ++ + R+A ++ Sbjct: 109 ETCELLVITKNDFKRCLAENFDLCLNIMKSLVQRLREADRNIESLALLDVYGRVAKLLID 168 Query: 149 SQEGD----LYHEKHT--QAAEYLGVSYRHLLYVLAQFIHDGLLIKSKKGYLIKNRK 199 E + + + T A+ +G S + V+ + G + +I ++ Sbjct: 169 FSEDERGQRVIRRRLTKQDIAKMIGASREMVSRVMKDLENRGYFRVEEGRIVIIEKR 225 >UniRef50_A0P0J2 Putative catabolite gene activator n=2 Tax=Labrenzia aggregata IAM 12614 RepID=A0P0J2_9RHOB Length = 250 Score = 128 bits (323), Expect = 1e-28, Method: Composition-based stats. Identities = 42/209 (20%), Positives = 78/209 (37%), Gaps = 7/209 (3%) Query: 5 AFKDCFLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDFF 64 A D++ L F A + I G + + G R+ +G + Sbjct: 37 ALDAQAREDLARFAFLKKFSAGEVIFTMGTLGQSMMAIAEGTVRVSMFTPSGGEVTLTDL 96 Query: 65 AAPCFIGEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKNY 124 GEI L+D +V+A+ C + L +++ +L D+ KL L + Sbjct: 97 KTGDVFGEIALLDGQERSASVKALTNCTVVVLERRNFLEVLRRDSNLSIKLIELLCQRVR 156 Query: 125 RNIVSLTQNQSFPLVNRLAAFIL-----LSQEGDLYH--EKHTQAAEYLGVSYRHLLYVL 177 R+ + + L RLA IL +S+E L + ++ A +G + ++ L Sbjct: 157 RSDERMIEGTFLELPARLAKLILRLSAPVSEERPLKKLSQSQSELAGMIGNTRENVNRCL 216 Query: 178 AQFIHDGLLIKSKKGYLIKNRKQLSGLAL 206 ++ L+ + +R L LA Sbjct: 217 RKWQKANLVNMQDGWLFLLDRPGLMKLAD 245 >UniRef50_C6WZT9 Transcriptional regulator, Crp/Fnr family n=2 Tax=Flavobacteriaceae RepID=C6WZT9_FLAB3 Length = 237 Score = 128 bits (321), Expect = 2e-28, Method: Composition-based stats. Identities = 36/192 (18%), Positives = 78/192 (40%), Gaps = 8/192 (4%) Query: 21 FHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDFFAAPCFIGEIELIDKDH 80 F + I ++G P+ +++L +G A+L G+ ++ F A IG L+ + Sbjct: 41 LKFRKGETIFEDGGTPNGVYFLNKGTAKLSKQGVYGKEHILRFIAEGDLIGYRSLLCGEQ 100 Query: 81 EPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKNYRNIVSLTQNQSFPLVN 140 +A+ + + LP + LL + ++ + + ++T + Sbjct: 101 FQARAEAMTDVEAIFLPSDVFLHLLEVGPRLSFVMLQKIAFELGESSNTVTVLAQKTVRE 160 Query: 141 RLAAFILLSQEGD--------LYHEKHTQAAEYLGVSYRHLLYVLAQFIHDGLLIKSKKG 192 RLA +LL ++ + A +G + + ++++F DGL+ + Sbjct: 161 RLAEILLLLEQKLGTDPEGFIKITLTREEIANLVGTATESAIRLISEFKQDGLIEADGRS 220 Query: 193 YLIKNRKQLSGL 204 I NR++L L Sbjct: 221 LKILNREKLIKL 232 >UniRef50_UPI0001C34903 Crp/FNR family transcriptional regulator n=1 Tax=Providencia rettgeri DSM 1131 RepID=UPI0001C34903 Length = 244 Score = 128 bits (321), Expect = 2e-28, Method: Composition-based stats. Identities = 35/214 (16%), Positives = 77/214 (35%), Gaps = 10/214 (4%) Query: 4 SAFKDCFLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDF 63 S D ++ + L + + + +G L+ + +G ++ + ++GR + + Sbjct: 28 SNLPDYLISILMTCATLRFYPDGEMVHYQGDPARGLYAVIQGSVKVSSISSDGRECVFRY 87 Query: 64 FAAPCFIGEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKN 123 + + GEI ++DK +AI L + K +L +F + L + L Sbjct: 88 LSPGNWFGEIAMLDKSARTHDAKAISPTILLTISPKDLTMILEKHPVFYQFLNILLCKVI 147 Query: 124 YRNIVSLTQNQSFPLVNRLAAFILLSQEG-DLYHEK---------HTQAAEYLGVSYRHL 173 + + + RLA +L EG HEK A + + + + Sbjct: 148 RNAFTIINDSALLSVSARLAKRLLSLAEGYGEPHEKGIQLSLYLTQDDLATIINTTRQTI 207 Query: 174 LYVLAQFIHDGLLIKSKKGYLIKNRKQLSGLALE 207 L + G + ++ N L ++ + Sbjct: 208 NKRLVAWEKLGWIDAKYGKIILVNLPALKQISED 241 >UniRef50_C8X3D0 Transcriptional regulator, Crp/Fnr family n=1 Tax=Desulfohalobium retbaense DSM 5692 RepID=C8X3D0_DESRD Length = 227 Score = 128 bits (321), Expect = 2e-28, Method: Composition-based stats. Identities = 33/204 (16%), Positives = 77/204 (37%), Gaps = 8/204 (3%) Query: 14 VSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDFFAAPCFIGEI 73 ++ + R+ F + IV + + + + G+ ++Y + A G+ + F Sbjct: 24 LAREARVKVFRPGEIIVSQEEPVRAFYLVLSGQVKIYRSSAEGKEQTLYLFGPGEPFCLC 83 Query: 74 ELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKNYRNIVSLTQN 133 ++ P A+E + LP + + L + + + LS + ++ + Sbjct: 84 AAFEEQGYPANAAALESSEIVILPGRTFENLAREAPSLIFPMLLVLSRRLKESMQLVETL 143 Query: 134 QSFPLVNRLAAFILLSQE--------GDLYHEKHTQAAEYLGVSYRHLLYVLAQFIHDGL 185 L R+A F+L + H + A+ LG + L V + + GL Sbjct: 144 SLKELPQRVATFLLHAAPRVADGETLDIRLPLTHRELAKMLGATPEGLSRVFKRLQNRGL 203 Query: 186 LIKSKKGYLIKNRKQLSGLALEMD 209 + + + + +R L L+ ++ Sbjct: 204 VSVNGRAIRVHDRAGLERLSHGVE 227 >UniRef50_Q3JC77 Transcriptional regulatory protein, Crp family n=6 Tax=Gammaproteobacteria RepID=Q3JC77_NITOC Length = 214 Score = 128 bits (321), Expect = 2e-28, Method: Composition-based stats. Identities = 30/184 (16%), Positives = 70/184 (38%), Gaps = 6/184 (3%) Query: 21 FHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDFFAAPCFIGEIELIDKDH 80 + ++ EG L+ + G+ ++Y + G+ ++ A + GE+ L+DK Sbjct: 26 RTYPKYTILIHEGDLSDSLYIILSGKVKVYISDEGGKEVILRTQKAGEYFGELALLDKGP 85 Query: 81 EPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKNYRNIVSLTQNQSFPLVN 140 +V +++ + + L F KL L+ + ++ + Sbjct: 86 RSASVMTLDKSRLSVVSKTIFNRCLTEHPDFALKLLCALTQRVRSLTENVKNLALLDVYG 145 Query: 141 RLAAFILL--SQEGDLY----HEKHTQAAEYLGVSYRHLLYVLAQFIHDGLLIKSKKGYL 194 R+A +L ++G H + A+ +G S + ++ G + + K + Sbjct: 146 RVARTLLDLAIEKGGKLIIEERPTHQEIAQRVGASREMVSRIMGDLATGGYIEVTSKTII 205 Query: 195 IKNR 198 I +R Sbjct: 206 IPHR 209 >UniRef50_Q1GF83 Transcriptional regulator, Crp/Fnr family n=14 Tax=Rhodobacterales RepID=Q1GF83_SILST Length = 222 Score = 127 bits (320), Expect = 2e-28, Method: Composition-based stats. Identities = 36/189 (19%), Positives = 64/189 (33%), Gaps = 3/189 (1%) Query: 21 FHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDFFAAPCFIGEIELIDKDH 80 H D + + G + L+ + G + A GR +D GEI + D Sbjct: 30 VHLETGDVLFERGDEGDALYAIISGALEISTLSAAGRKLSLDMMRPGAIFGEIAMFDPGE 89 Query: 81 EPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKNYRNIVSLTQNQSFPLVN 140 A E L + L + + L + P+ Sbjct: 90 RTATATAAEPSHLRRLRHRDVLAQLTKHPELAGDMLKLAGQRMRWMNTQLNEQVFLPMPV 149 Query: 141 RLAAFILL---SQEGDLYHEKHTQAAEYLGVSYRHLLYVLAQFIHDGLLIKSKKGYLIKN 197 RLA +L + ++ AE++G + + L+ + GL+ S+ G +K+ Sbjct: 150 RLARKLLYLTPADGNGQLSLSQSELAEFVGATREAVSKTLSNWRKAGLIEISRGGLHLKD 209 Query: 198 RKQLSGLAL 206 R L+ LA Sbjct: 210 RGGLAVLAD 218 >UniRef50_A1SH69 Cyclic nucleotide-binding n=1 Tax=Nocardioides sp. JS614 RepID=A1SH69_NOCSJ Length = 267 Score = 127 bits (320), Expect = 2e-28, Method: Composition-based stats. Identities = 36/212 (16%), Positives = 69/212 (32%), Gaps = 9/212 (4%) Query: 5 AFKDCFLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDFF 64 D + ++ + + + Q LF L +GR R++ +GR Sbjct: 56 DLDDTEMDALAQAAPMRAYATGALVYTPHQPLETLFILKKGRIRIFRVSPDGRALTTAII 115 Query: 65 AAPCFIGEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKNY 124 GE+ ++ + +A+++ + R LLL D ++ TL + Sbjct: 116 DPGTIFGEMVIVGQQMHDSFAEALDDVVVCVMTKADVRRLLLGDPRISARISETLGRRIG 175 Query: 125 RNIVSLTQNQSFPLVNRLAAFILLSQ---------EGDLYHEKHTQAAEYLGVSYRHLLY 175 + + R+A ++ G H Q A S Sbjct: 176 ELEQKFSDAVFKSVPERIAGALVTLASATSGRPLGRGIQVRLTHEQLAALAATSRETTTK 235 Query: 176 VLAQFIHDGLLIKSKKGYLIKNRKQLSGLALE 207 +L GL+ + I NR++L L+ E Sbjct: 236 ILGDLADQGLITLGRGRITILNRERLRVLSGE 267 >UniRef50_C0CR54 Putative uncharacterized protein n=1 Tax=Blautia hydrogenotrophica DSM 10507 RepID=C0CR54_9FIRM Length = 221 Score = 127 bits (319), Expect = 3e-28, Method: Composition-based stats. Identities = 48/204 (23%), Positives = 80/204 (39%), Gaps = 5/204 (2%) Query: 10 FLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDFFAAPCF 69 F+ D A +YI + G+ LFY+ G R+ G+ L+D F Sbjct: 11 FIKDRLDRIPRVTVKAGEYISRAGKADGGLFYVVSGYMRVECVSHEGKKILVDNLGPDNF 70 Query: 70 IGEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKNYRNIVS 129 G+I + K + + A +C L L K Y ++ D F +S++ Y+ Sbjct: 71 TGKISRVQKAYFACDIFAATDCDLLFLESKVYEA-MMKDKGFSELFYRKISNRVYQMYKG 129 Query: 130 LTQNQSFPLVNRLAAFILLSQEGDLYHEKHTQ--AAEYLGVSYRHLLYVLAQFIHDGLLI 187 + L +A I D E + E L +S R L +L +F+ G L Sbjct: 130 RLVRSFYSLAELVAYHICSRTGKDQIFEYRSTLSLCEELDISRRGLYNILNKFLEKGYLE 189 Query: 188 KS--KKGYLIKNRKQLSGLALEMD 209 K Y ++NR++L + E+ Sbjct: 190 KEVGSSRYYVRNRRELEKICSEVR 213 >UniRef50_A4TDK3 Transcriptional regulator, Crp/Fnr family n=8 Tax=Actinomycetales RepID=A4TDK3_MYCGI Length = 225 Score = 127 bits (319), Expect = 3e-28, Method: Composition-based stats. Identities = 40/204 (19%), Positives = 78/204 (38%), Gaps = 10/204 (4%) Query: 14 VSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDFFAAPCFIGEI 73 + + + F + EG L+ +T GRA++ T +GR SL+ GE+ Sbjct: 22 LCSQLQKVSFPRGHRVFNEGDLGDTLYIITSGRAKIGCTSPDGRESLLTLMGPSDMFGEL 81 Query: 74 ELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKNYRNIVSLTQN 133 + D +V A+ + + R + +L L+ + R +L+ Sbjct: 82 AIFDPGPRTSSVTALTALHAVMMDRDALRFWIAERPEIAEQLLRVLARRLRRTNDALSDL 141 Query: 134 QSFPLVNRLAAFILL-------SQEGDL---YHEKHTQAAEYLGVSYRHLLYVLAQFIHD 183 + R+A +L QEG L + + A+ G S + LA F+ Sbjct: 142 IFTDVPGRVAKQLLDLARRFGVQQEGSLRVDHGLTQEEIAQLAGSSRETINKALADFVQR 201 Query: 184 GLLIKSKKGYLIKNRKQLSGLALE 207 G + + + +I + +L+ A + Sbjct: 202 GWIEQRGRTTIIHDPARLARRAQQ 225 >UniRef50_Q1AV16 Transcriptional regulator, Crp/Fnr family n=1 Tax=Rubrobacter xylanophilus DSM 9941 RepID=Q1AV16_RUBXD Length = 249 Score = 127 bits (319), Expect = 3e-28, Method: Composition-based stats. Identities = 38/211 (18%), Positives = 79/211 (37%), Gaps = 10/211 (4%) Query: 6 FKDCFLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDFFA 65 D L DV R + A + I G + + G+ +L A GR L++ Sbjct: 35 LDDAQLADVDGVFRERGYAAGERIYSGGDPAGTFYVVAVGKVKLVRPSAQGRDVLLEILG 94 Query: 66 APCFIGEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKNYR 125 +G + + D P + +A +C LA+ R ++ L LS + Sbjct: 95 PGDTLGTVPMFGDDVYPDSAEAQTDCCLLAITAADLRTVVERYPPVAHTLLEVLSGQLRS 154 Query: 126 NIVSLTQNQSFPLVNRLAAFILLSQEGD----------LYHEKHTQAAEYLGVSYRHLLY 175 ++ Q + + +R+AA +L + A+ G + Sbjct: 155 AREAIRQASAGSVESRVAASLLKLADRLGSDRRGETLIQVPLTRQDLADMTGAQVETVSR 214 Query: 176 VLAQFIHDGLLIKSKKGYLIKNRKQLSGLAL 206 V++++ +GL+ + + +R++L+ +A Sbjct: 215 VMSRWRKEGLIRSGRGWVAVVDRERLAAIAA 245 >UniRef50_A5FBG9 Putative transcriptional regulator, Crp/Fnr family n=1 Tax=Flavobacterium johnsoniae UW101 RepID=A5FBG9_FLAJ1 Length = 227 Score = 127 bits (319), Expect = 3e-28, Method: Composition-based stats. Identities = 37/201 (18%), Positives = 74/201 (36%), Gaps = 9/201 (4%) Query: 14 VSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDFFAAPCFIGEI 73 + + ++ I EG P+ +FY+ G+ + Y GR +I + + F G Sbjct: 24 LEKVMQSKKYVKNQTIFTEGTLPTGIFYIQTGKVKKYKVDNEGREQIIYIYNSGEFFGYT 83 Query: 74 ELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKNYRNIVSLTQN 133 ++ + IE +P + +L N +F R L LS++ + Sbjct: 84 AILSEQAYGDTAVVIENSVISFIPKDDFFNVLNNSVVFSRLLLKCLSYEFSVMANLMAVL 143 Query: 134 QSFPLVNRLA-AFILLSQEGDL--------YHEKHTQAAEYLGVSYRHLLYVLAQFIHDG 184 + R+A + ++L + + A +G L VL F + Sbjct: 144 SQRTVRERVALSLLILHDKYKINDDPKDVFITLSRGDLANMVGTVNETLARVLHDFKSEN 203 Query: 185 LLIKSKKGYLIKNRKQLSGLA 205 L+ + + N +QL+ +A Sbjct: 204 LIWMEGRKIQLMNFQQLTHIA 224 >UniRef50_C1XRF8 cAMP-binding protein n=1 Tax=Meiothermus silvanus DSM 9946 RepID=C1XRF8_9DEIN Length = 222 Score = 126 bits (318), Expect = 4e-28, Method: Composition-based stats. Identities = 35/207 (16%), Positives = 79/207 (38%), Gaps = 5/207 (2%) Query: 5 AFKDCFLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANG-RVSLIDF 63 + L ++A+ R + +G L+ + RG ++Y G R ++ Sbjct: 15 GLESTDLVALAAEARFRSLAKGQTLFLQGDPVDALYLVARGLIKVYRFDPKGGRQVVLHL 74 Query: 64 FAAPCFIGEIELIDKDHE-PRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHK 122 + + + + P + +A+E+ L++P + + L+ R + L+ + Sbjct: 75 EGPHQAVAAVAVFLEQPYYPASAEALEDTLVLSIPREAFDRLVDTRASLARAVIRFLAKR 134 Query: 123 NYRNIVSLTQNQSFPLVNRLAAFILLSQE---GDLYHEKHTQAAEYLGVSYRHLLYVLAQ 179 + + L + + +RLA ++L E + + A LG + L Q Sbjct: 135 QSQLVHLLDRLVFAEVGSRLAEYLLQRAEAEGPGFRLPTNPELAALLGTVPEAVSRKLGQ 194 Query: 180 FIHDGLLIKSKKGYLIKNRKQLSGLAL 206 F +GL+ K+ + + L +A Sbjct: 195 FFREGLIEVKKRQVWVLDASALREIAE 221 >UniRef50_Q07HN5 Transcriptional regulator, Crp/Fnr family n=1 Tax=Rhodopseudomonas palustris BisA53 RepID=Q07HN5_RHOP5 Length = 234 Score = 126 bits (318), Expect = 4e-28, Method: Composition-based stats. Identities = 35/195 (17%), Positives = 76/195 (38%), Gaps = 4/195 (2%) Query: 14 VSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDFFAAPCFIGEI 73 ++A ++ I +G + LF + RG + T ++G+ ++ GEI Sbjct: 36 LAAHAKIKDVPRGTTIFMKGAAGTCLFAVCRGVVLVTNTSSDGKSLFLNEIKEGEIFGEI 95 Query: 74 ELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKNYRNIVSLTQN 133 L+D A +C + + + + PLL ++ + KL L + R + Sbjct: 96 ALLDGQPRTADAAAFTDCSLIVIERRDFLPLLRSNPDVMLKLVEILCSRLRRTTEQVEDL 155 Query: 134 QSFPLVNRLAAFILLSQ----EGDLYHEKHTQAAEYLGVSYRHLLYVLAQFIHDGLLIKS 189 L RLA +L + + ++ +G+S + L ++ +G L Sbjct: 156 MFMDLRGRLAKTLLRLSQSAGDDRTLDISQNELSQMVGLSREMINKQLQVWVREGYLKIE 215 Query: 190 KKGYLIKNRKQLSGL 204 ++ +I + L+ + Sbjct: 216 RRRLIILQPQALADI 230 >UniRef50_C6P8N1 Cyclic nucleotide-binding protein n=1 Tax=Thermoanaerobacterium thermosaccharolyticum DSM 571 RepID=C6P8N1_CLOTS Length = 232 Score = 126 bits (316), Expect = 6e-28, Method: Composition-based stats. Identities = 35/204 (17%), Positives = 80/204 (39%), Gaps = 8/204 (3%) Query: 5 AFKDCFLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDFF 64 KDC ++ + + I +G+ + + + G +Y NG+ + Sbjct: 20 ILKDC-PYEILKQWEIKDYAKGTVICNQGEVYDYFYIIVSGSVDVYIVAENGKKYSQAVY 78 Query: 65 AAPCFIGEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKNY 124 +IGE+E+ DK +VQA+ L L +++ + D + TL + Y Sbjct: 79 TRGYYIGELEIFDKKPYICSVQALSPVKILRLKREYFLKWIEIDKNINNYVMHTLCKQFY 138 Query: 125 RNIVSLTQNQSFPLVNRLAAFILLS-------QEGDLYHEKHTQAAEYLGVSYRHLLYVL 177 ++ + L NR+ +++ ++ + + + Q +E V+ R + +L Sbjct: 139 NLSKKAGEDTLYSLKNRVCNYLISVGYKNPNYKKNIIVNIEKKQLSEKFAVTQRSINRIL 198 Query: 178 AQFIHDGLLIKSKKGYLIKNRKQL 201 ++ + +IK+ +L Sbjct: 199 QFLKEKNIIDVNNTCIIIKDMDEL 222 >UniRef50_C1XIJ9 cAMP-binding protein n=2 Tax=Meiothermus RepID=C1XIJ9_MEIRU Length = 225 Score = 126 bits (316), Expect = 7e-28, Method: Composition-based stats. Identities = 33/189 (17%), Positives = 64/189 (33%), Gaps = 5/189 (2%) Query: 21 FHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDFFAAPCFIGEIELIDKDH 80 ++ A I + G + L+ + G+ R+Y T +GR + + GE+ L+D Sbjct: 32 RNYPAGKLIFEAGDMGAALYIVQSGQVRIYRTYLDGRERMFAYLGPGEVFGEMSLLDDQP 91 Query: 81 EPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKNYRNIVSLTQNQSFPLVN 140 + + + L L Y L+ L L L+ + + L Sbjct: 92 RSASAETTVDSVLLVLYQDAYWSLVRKWPEILHNLATILARRLREADLELEVLSFEEARG 151 Query: 141 RLAAFILLSQEGDL-----YHEKHTQAAEYLGVSYRHLLYVLAQFIHDGLLIKSKKGYLI 195 R+A + ++ H + A+ G S + VL + L+ I Sbjct: 152 RVAYALTKLRKQRYGDGLKMKLTHQELAQLSGTSRETVTRVLHALREEELVKVGSGYVEI 211 Query: 196 KNRKQLSGL 204 + L + Sbjct: 212 LDPAGLEEV 220 >UniRef50_B8G111 Transcriptional regulator, Crp/Fnr family n=2 Tax=Desulfitobacterium hafniense RepID=B8G111_DESHD Length = 239 Score = 126 bits (316), Expect = 7e-28, Method: Composition-based stats. Identities = 31/210 (14%), Positives = 71/210 (33%), Gaps = 11/210 (5%) Query: 6 FKDCFLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDFFA 65 D L +S + + EG + + G+ + + G+ ++ + Sbjct: 29 LADEQLAVISGLITRRRYKKGQVLFFEGDVSDKFYIINHGKIKTFKHTREGKEQILYILS 88 Query: 66 APCFIGEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKNYR 125 FIG++ L+ K P +A+E+ L +L + K+ ++ + Sbjct: 89 EGDFIGDLSLLKKSAFPYNAEALEDVGVCTLSKDDLDRILKENPEICLKILESVHDRLVN 148 Query: 126 NIVSLTQNQSFPLVNRLAAFILLSQEG----------DLYHEKHTQAAEYLGVSYRHLLY 175 + + + R+A + + + A ++GV+ + Sbjct: 149 LENLVQTLSTKDVEARIAGLLFNFSKNFGEHKDGKVMLNIALTREEMANFIGVTRETMSR 208 Query: 176 VLAQFIHDGLLIKSKKGYLIKNRKQ-LSGL 204 L+ +G+L +I NR Q L + Sbjct: 209 KLSGMQDEGILELVGNKRIIINRLQDLEAM 238 >UniRef50_A4X9W3 Transcriptional regulator, Crp/Fnr family n=5 Tax=Actinomycetales RepID=A4X9W3_SALTO Length = 230 Score = 125 bits (315), Expect = 8e-28, Method: Composition-based stats. Identities = 36/190 (18%), Positives = 67/190 (35%), Gaps = 5/190 (2%) Query: 21 FHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDFFAAPCFIGEIELIDKDH 80 + + E L L RG ++ T G +++ P +GE+ L+D Sbjct: 36 RTYRKGQLLFVENDPGESLIVLRRGAVAVFRTAPTGERAVLSVIRPPEVLGEVSLLDAST 95 Query: 81 EPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKNYRNIVSLTQNQSFPLVN 140 + +AIE+C LAL + L+ ++ L + +L R + L Sbjct: 96 RSASAEAIEDCAALALSRGAFMELVHSNPRILDAVMRSLGSLIRRLTEQNADHVFLDLPG 155 Query: 141 RLAAFILLSQEGDL-----YHEKHTQAAEYLGVSYRHLLYVLAQFIHDGLLIKSKKGYLI 195 R+A ++ +Q AE G S + + + F G L + ++ Sbjct: 156 RVAKTLVRLAGESQAPMITIELNQSQLAEMAGGSRQSVNQAIGSFASRGWLRTEGRRIVV 215 Query: 196 KNRKQLSGLA 205 + L A Sbjct: 216 TDVASLRRRA 225 >UniRef50_B4RIS9 Transcriptional regulator(CAMP-binding) n=1 Tax=Phenylobacterium zucineum HLK1 RepID=B4RIS9_PHEZH Length = 231 Score = 125 bits (315), Expect = 8e-28, Method: Composition-based stats. Identities = 35/187 (18%), Positives = 69/187 (36%), Gaps = 8/187 (4%) Query: 27 DYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDFFAAPCFIGEIELIDKDHEPRAVQ 86 + + G P L+ + G RL T ++GR +++ + GE L + Sbjct: 45 EVLFLRGSAPDALYCVDVGVVRLCVTSSSGREAVLGLVTPGHWFGEASLFTGEPRSHDAL 104 Query: 87 AIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKNYRNIVSLTQNQSFPLVNRLAAFI 146 A+ + LA+P L+ +L + + + + L PL RLA + Sbjct: 105 AVVDSELLAVPAAALHELVDGRPAYLLQFLRLMGLRYRSTLERLDDAALQPLPVRLARKL 164 Query: 147 LLSQE--------GDLYHEKHTQAAEYLGVSYRHLLYVLAQFIHDGLLIKSKKGYLIKNR 198 L + A LGVS + + +L ++ G+L + + ++ Sbjct: 165 LEMSRSDATATAGDGVLQISQEDLAHALGVSRQSINRILKRWEAAGVLQVNYRSLVLLKP 224 Query: 199 KQLSGLA 205 + L +A Sbjct: 225 EALGFVA 231 >UniRef50_B7H3W0 Cyclic nucleotide-binding domain protein n=14 Tax=Acinetobacter RepID=B7H3W0_ACIB3 Length = 235 Score = 125 bits (315), Expect = 8e-28, Method: Composition-based stats. Identities = 38/212 (17%), Positives = 70/212 (33%), Gaps = 9/212 (4%) Query: 4 SAFKDCFLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDF 63 S + F + + F Y+ + ++ + G L NG +L Sbjct: 21 SVLLEVFQKFILEHGKQITFEKNSYVFHAQDEFDGIYTVLEGSISLGYVDVNGNEALSAI 80 Query: 64 FAAPCFIGEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKN 123 + GEI LID + A+++ L +P K LL + S K Sbjct: 81 AEPIMWFGEISLIDHEPRSHDAIALKKSIVLHIPAKPLNELLKEHPYYWYYFARLTSQKL 140 Query: 124 YRNIVSLTQNQSFPLVNRLAAFILLSQEG---------DLYHEKHTQAAEYLGVSYRHLL 174 + Q+ + RLA +L EG Q A L S + + Sbjct: 141 RYVFLEQIAIQTRSISQRLAQRLLFILEGYGNHILIQDHHIQISQEQLANMLTTSRQTIN 200 Query: 175 YVLAQFIHDGLLIKSKKGYLIKNRKQLSGLAL 206 + L+ ++ + + I + ++L +A Sbjct: 201 HELSLLEKQNIIKIAFRKIEILDIEKLKVIAQ 232 >UniRef50_C6WVL6 Transcriptional regulator, Crp/Fnr family n=1 Tax=Methylotenera mobilis JLW8 RepID=C6WVL6_METML Length = 227 Score = 125 bits (315), Expect = 9e-28, Method: Composition-based stats. Identities = 39/199 (19%), Positives = 76/199 (38%), Gaps = 6/199 (3%) Query: 11 LTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDFFAAPCFI 70 +T ++ ++L + + G+ L+ L +G+ +L T G +I + Sbjct: 24 ITSIAEHSQLIDYPKGTSVFNRGEAAVGLYILLKGQLKLGVTSPQGSEKIISIVSPGDSF 83 Query: 71 GEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKNYRNIVSL 130 GE L + P QA + L +P +L NDT+F RK+ LS + ++ + + Sbjct: 84 GEAILFLERQFPVYAQATLDSQVLLVPKSLIFSMLDNDTMFARKMLAGLSVRMHQLVQDI 143 Query: 131 TQNQSFPLVNRLAAFILLSQ------EGDLYHEKHTQAAEYLGVSYRHLLYVLAQFIHDG 184 R ++L + A L ++ L +A+ G Sbjct: 144 EMLSLQSCTQRFIGYLLQISADATDASNITLPASKSTIASLLNLTPETLSRTMAKLQQLG 203 Query: 185 LLIKSKKGYLIKNRKQLSG 203 L+ + K +I + K+L Sbjct: 204 LIEVNGKDVMIIDVKKLRS 222 >UniRef50_A4AEI3 Transcriptional regulator, Crp/Fnr family protein n=1 Tax=marine actinobacterium PHSC20C1 RepID=A4AEI3_9ACTN Length = 231 Score = 125 bits (315), Expect = 1e-27, Method: Composition-based stats. Identities = 39/213 (18%), Positives = 78/213 (36%), Gaps = 11/213 (5%) Query: 6 FKDCFLTDVSADTRL---FHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLID 62 F D ++ R+ + + + + Q + LF L +GR R++ +G+ + Sbjct: 17 FADLSPAEIEQMDRMAPSRSYSLGEMVFSQSQPVTALFILKKGRIRIFRVTEDGKALTMA 76 Query: 63 FFAAPCFIGEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHK 122 GE+ ++ + +AIE+ L LL D ++ L + Sbjct: 77 ILEPGAVFGEMMMVGQRMYDNYAEAIEDVEVCLLNTADVERYLLADPRIAIRISRHLGEQ 136 Query: 123 NYRNIVSLTQNQSFPLVNRLAAFILLSQE--------GDLYHEKHTQAAEYLGVSYRHLL 174 R LT PL +R+ + +L E H Q A LG + Sbjct: 137 VVRLEERLTDLALRPLQSRVCSTLLRLTETARTPRFAHPTIRLSHDQLAGLLGATRESTS 196 Query: 175 YVLAQFIHDGLLIKSKKGYLIKNRKQLSGLALE 207 ++ G++ + + +I++ L+ LA + Sbjct: 197 KAMSDLASRGIIRQGRARVIIQDMDALAQLARQ 229 >UniRef50_C0WNJ4 CRP/FNR family transcriptional regulator n=3 Tax=Lactobacillus RepID=C0WNJ4_LACBU Length = 228 Score = 125 bits (314), Expect = 1e-27, Method: Composition-based stats. Identities = 33/189 (17%), Positives = 66/189 (34%), Gaps = 5/189 (2%) Query: 21 FHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDFFAAPCFIGEIELIDKDH 80 + I G Q L G+ +L +G+ L+ F GE L D Sbjct: 39 HQYPKGTIIYLAGDQVGHFMILEHGQVKLSQISESGKEQLLKVMQPGDFDGEAALFSHDQ 98 Query: 81 EPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKNYRNIVSLTQNQSFPLVN 140 A+ + + ++ LL + L T+S + T + + + Sbjct: 99 RNVTATALVDSNVCQIDQDAFQSLLKSSPQLAVNLLTTMSQQINNLQEEKTVSSTSDVAG 158 Query: 141 RLAAFIL-----LSQEGDLYHEKHTQAAEYLGVSYRHLLYVLAQFIHDGLLIKSKKGYLI 195 +LA ++L L + K A ++G + + Q I DG++ + I Sbjct: 159 QLAKYLLETSASLHESSFKLPLKKKDIATFIGTTPETISRTFKQLIADGVIKMTASLVEI 218 Query: 196 KNRKQLSGL 204 ++ +L+ + Sbjct: 219 VDQDRLTDI 227 >UniRef50_A4CGJ8 Transcriptional regulatory protein n=9 Tax=Flavobacteria RepID=A4CGJ8_9FLAO Length = 252 Score = 125 bits (314), Expect = 1e-27, Method: Composition-based stats. Identities = 30/194 (15%), Positives = 75/194 (38%), Gaps = 8/194 (4%) Query: 21 FHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDFFAAPCFIGEIELIDKDH 80 + I EG++ + ++ + G ++L NG+ ++ + +G+ ++ ++ Sbjct: 57 RKIKKGEIIFDEGEKLAGVYCVRDGVSKLSKLSENGKDQIVKLASKGQVLGQRSVVAEES 116 Query: 81 EPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKNYRNIVSLTQNQSFPLVN 140 + A+ + +P + L + F ++ T++H + + Sbjct: 117 ANLSATAVNDMEICFIPREAITDTLHKNPEFSYEVLQTMAHDLREADDVIVNMSQKSVKQ 176 Query: 141 RLAAFILLSQEG--------DLYHEKHTQAAEYLGVSYRHLLYVLAQFIHDGLLIKSKKG 192 R+A +L +E L A +G + + +L++ +GL+ S K Sbjct: 177 RIAQALLYLRENFGEDGEGYLLLVLSREDIASVVGTATESCIRMLSELRKEGLIKTSGKR 236 Query: 193 YLIKNRKQLSGLAL 206 I + ++L LA Sbjct: 237 LSITDARKLKSLAD 250 >UniRef50_B8ID71 Transcriptional regulator, Crp/Fnr family n=11 Tax=Rhizobiales RepID=B8ID71_METNO Length = 230 Score = 124 bits (313), Expect = 1e-27, Method: Composition-based stats. Identities = 34/209 (16%), Positives = 67/209 (32%), Gaps = 2/209 (0%) Query: 4 SAFKDCFLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDF 63 + D L V+ ++ + Q+ L+ + RG R+ A GR ++ Sbjct: 20 AGLGDPALQAVARLCVTRSLAPQEVLFQKNDPADALYAVRRGEIRIATGTAEGRQLTLNL 79 Query: 64 FAAPCFIGEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKN 123 GE+ L+D A E + + LL L L + Sbjct: 80 LGPGDVFGEVALLDGHPRTADAVATEPTELFVIRRRDLLDLLSQQPEVAIALIELLCKRV 139 Query: 124 YRNIVSLTQNQSFPLVNRLAAFILLSQE--GDLYHEKHTQAAEYLGVSYRHLLYVLAQFI 181 + + P+ RLA + + G+ + A + S + L + Sbjct: 140 RWMSERMEETNFLPVPARLARRLAALADDYGNEIQATQEELAVFANTSRETVNRQLQAWK 199 Query: 182 HDGLLIKSKKGYLIKNRKQLSGLALEMDP 210 DG++ ++ + +R L +A Sbjct: 200 RDGIVQLARGRIRLLDRPALDVIADVRTE 228 >UniRef50_C7REI8 Transcriptional regulator, Crp/Fnr family n=4 Tax=Anaerococcus RepID=C7REI8_ANAPD Length = 215 Score = 124 bits (313), Expect = 1e-27, Method: Composition-based stats. Identities = 44/206 (21%), Positives = 82/206 (39%), Gaps = 8/206 (3%) Query: 5 AFKDCFLTDVSADTRLFH--FLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLID 62 D L +V ++ + + +I ++ + +YL +G ++Y G+ +I Sbjct: 11 NLTDEELREVELLSQTYETVYPKGSHIFKKDEVKEDFYYLKKGSVKVYKIDPEGKRYIIA 70 Query: 63 FFAAPCFIGEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLN--DTLFLRKLCVTLS 120 F P GE+ K+ +A E+ + K +R L++ L+ Sbjct: 71 SFNKPAIFGEVYAYLKNPFDFWAEADEDSEIFVI--KDFRKLIMTTSSKNLRLNFIDILA 128 Query: 121 HKNYRNIVSLTQNQSFPLVNRLAAFILLSQEGDLYHE--KHTQAAEYLGVSYRHLLYVLA 178 K+ + N L ++AAF+L +++ H + A+YL + L L+ Sbjct: 129 KKSLKLSKKNQINSQAKLKQKIAAFLLDNEDEGKVHLSISREEWADYLATTRPSLSRSLS 188 Query: 179 QFIHDGLLIKSKKGYLIKNRKQLSGL 204 GL+ S K I +RK L GL Sbjct: 189 LMDKAGLIEVSDKEINILDRKALEGL 214 >UniRef50_A3EW66 Putative transcriptional regulator, Crp/Fnr family n=2 Tax=Leptospirillum sp. Group II RepID=A3EW66_9BACT Length = 237 Score = 124 bits (313), Expect = 1e-27, Method: Composition-based stats. Identities = 41/209 (19%), Positives = 70/209 (33%), Gaps = 11/209 (5%) Query: 6 FKDCFLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDFFA 65 K L + RL H+ + I+QE + LF + G ++ GR ++ Sbjct: 22 LKAEELETLEKIVRLRHYRSGQKIIQEFDRGMELFVIVSGSVKISTEDVEGREIIVSIAY 81 Query: 66 APCFIGEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKNYR 125 F GEI L+D D V AIE L++ + + F ++ + + + Sbjct: 82 PSDFFGEIALLDDDTRSATVTAIEPTTVLSIEKNDFLRFFVAYPEFALRMLAVMGQRIRK 141 Query: 126 NIVSLTQNQSFPLVNRLAAFILLSQEGDLYHEK-----------HTQAAEYLGVSYRHLL 174 L ++A +L E + + A GVS + Sbjct: 142 TDEKLIHMAFADSFAKIARTLLTIYEKEGVQANGSLPYIHDRFTRQELASLSGVSRETVS 201 Query: 175 YVLAQFIHDGLLIKSKKGYLIKNRKQLSG 203 L FI L+ + I N +L Sbjct: 202 RSLGAFIQAELIRIADNRIYILNENKLRR 230 >UniRef50_Q0EX27 Cyclic nucleotide-binding:Bacterial regulatory protein, Crp n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0EX27_9PROT Length = 227 Score = 124 bits (313), Expect = 1e-27, Method: Composition-based stats. Identities = 34/211 (16%), Positives = 75/211 (35%), Gaps = 11/211 (5%) Query: 4 SAFKDCFLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDF 63 S + L ++ ++ +VQE ++ + G ++ +GR ++ Sbjct: 12 SELNEGELASIAKLASSIDVQKKNIVVQEFAPGDSMYVILSGEVKISTYSVDGREVVLAL 71 Query: 64 FAAPCFIGEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKN 123 F GE+ L+D+ V + + + + PLL+ KL ++ + Sbjct: 72 LGKGSFFGEMSLLDEQPRSATVTTMTDAKLAHIRRRDLVPLLMERPAITLKLLSEITSRL 131 Query: 124 YRNIVSLTQNQSFPLVNRLAAFILLSQEG----------DLYHEKHTQAAEYLGVSYRHL 173 R L + S + +RL A+I+ H A+ L S + Sbjct: 132 RRTSRVLERISSMDVPHRLYAYIVDHCHRFGQPKSDGRYSTVLPTHQLLADQLSTSRETI 191 Query: 174 LYVLAQFIHDGLLIK-SKKGYLIKNRKQLSG 203 ++ +G+L++ +G + + L Sbjct: 192 SRAISTLKKEGILLQGDGRGKMSVDVDALEE 222 >UniRef50_A8MJD1 Cyclic nucleotide-binding protein n=1 Tax=Alkaliphilus oremlandii OhILAs RepID=A8MJD1_ALKOO Length = 222 Score = 124 bits (313), Expect = 2e-27, Method: Composition-based stats. Identities = 34/205 (16%), Positives = 75/205 (36%), Gaps = 3/205 (1%) Query: 2 SESAFKDCFLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLI 61 ++ F D ++FH+ + I +G + + + GRA +Y T G+ Sbjct: 10 NKEILDHVFRYKNKEDWKVFHYAKNEVICYQGDVYPYFYVILEGRANIYHTSERGKSYSQ 69 Query: 62 DFFAAPCFIGEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSH 121 + + GE+E+ D ++A+E+ + L + + D + ++ Sbjct: 70 SVYREGNYFGELEIFDLKPYVCQIEALEDMTVMRLGRDLFLKWIQEDKEVNLYILRSICD 129 Query: 122 KNYRNIVSLTQNQSFPLVNRLAAFILL---SQEGDLYHEKHTQAAEYLGVSYRHLLYVLA 178 Y ++ + L R+ +IL D +E+ V+ R + VL Sbjct: 130 NFYYLSEKAIKDTLYSLKYRVCGYILEELKRSSSDEVEISKKYLSEHFVVTQRSINRVLK 189 Query: 179 QFIHDGLLIKSKKGYLIKNRKQLSG 203 + L++ + I N + + Sbjct: 190 ELAEKHLILNGENTIKILNVEGIRD 214 >UniRef50_C5VVR1 Crp family regulatory protein n=5 Tax=Streptococcus suis RepID=C5VVR1_STRSE Length = 224 Score = 124 bits (311), Expect = 3e-27, Method: Composition-based stats. Identities = 30/197 (15%), Positives = 77/197 (39%), Gaps = 3/197 (1%) Query: 11 LTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDFFAAPCFI 70 ++ + F ++ +++G+ +++ + GR +Y+ NG+ + + I Sbjct: 26 PYEILRKIHVKRFEDGEFELEQGEIYQYMYIIVEGRVNVYSESENGKKYFLCCSQSGDLI 85 Query: 71 GEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKNYRNIVSL 130 GE+E+ + V+ + + L + + D F + +YR + Sbjct: 86 GEMEIFQQVPYISYVKGVGDIIALEIDKDTLLSWMALDQNFSSLFIKKICENSYRMCNRM 145 Query: 131 TQNQSFPLVNRLAAFILLSQEGD---LYHEKHTQAAEYLGVSYRHLLYVLAQFIHDGLLI 187 +N + L RLA ++L G + ++ + V+ R + +L +F ++ Sbjct: 146 KRNSLYDLRQRLAYYLLEQFGGKKLASLQFNSERLSQEMAVTQRSINRLLKEFKEKQIID 205 Query: 188 KSKKGYLIKNRKQLSGL 204 + + + L+ L Sbjct: 206 LGHGKIQLLDHQALTSL 222 >UniRef50_B8FQL0 Transcriptional regulator, Crp/Fnr family n=3 Tax=Desulfitobacterium hafniense RepID=B8FQL0_DESHD Length = 220 Score = 123 bits (310), Expect = 3e-27, Method: Composition-based stats. Identities = 36/194 (18%), Positives = 79/194 (40%), Gaps = 10/194 (5%) Query: 21 FHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDFFAAPCFIGEIELIDKDH 80 + + I + + S L YL G+ + + ++G + AP GE +ID Sbjct: 26 LEYGPGEMIYYQDEPASGLVYLDEGKIKNFFLYSDGTEKTLCILEAPSITGETAVIDGGT 85 Query: 81 EPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKNYRNIVSLTQNQSFPLVN 140 + A+ + + +P + + LL + + + ++ K R++ Q + Sbjct: 86 SICSAVAVTQVKIVFIPREKAQELLASKPELMMLILKYMALK-IRSMQVQAQEIVSNIPQ 144 Query: 141 RLAAFILLSQEGDLY---------HEKHTQAAEYLGVSYRHLLYVLAQFIHDGLLIKSKK 191 RLA +L ++ ++ KH + A ++G + + L F GL+ K + Sbjct: 145 RLAYLLLNYKKYGIFVHNAQDPRLFIKHDELAGFIGTTRPKVTEHLNNFSRKGLIDKGRG 204 Query: 192 GYLIKNRKQLSGLA 205 +IK+ + L ++ Sbjct: 205 YIVIKDLEGLRKIS 218 >UniRef50_A2U1H8 Transcriptional regulator, CAP family n=1 Tax=Polaribacter sp. MED152 RepID=A2U1H8_9FLAO Length = 259 Score = 123 bits (310), Expect = 3e-27, Method: Composition-based stats. Identities = 31/191 (16%), Positives = 70/191 (36%), Gaps = 8/191 (4%) Query: 24 LARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDFFAAPCFIGEIELIDKDHEPR 83 + + EG+ + +F + G ++ NG+ +++ IGE L+ ++ Sbjct: 67 KKGEPLFIEGEHINGVFCIKDGICKVSKISDNGKNQIVNLIKKGDLIGERSLLTEEVSNL 126 Query: 84 AVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKNYRNIVSLTQNQSFPLVNRLA 143 A+E+ +P L + F + +++ + + RLA Sbjct: 127 NAVALEDLEVCFIPKSEIVKDLEKNQNFTMDVLKNMANSLKNADNLIVDMAQKSVKQRLA 186 Query: 144 AFIL-------LSQEGDL-YHEKHTQAAEYLGVSYRHLLYVLAQFIHDGLLIKSKKGYLI 195 +L ++EG+L H A +G + + +L++F G + K + Sbjct: 187 ETLLKLQTKFGTTEEGNLDIHLSREDIANIIGTATESAIRLLSEFKKKGYIEMKGKSISV 246 Query: 196 KNRKQLSGLAL 206 N L ++ Sbjct: 247 ANENGLKKVSS 257 >UniRef50_D1U5Y5 Transcriptional regulator, Crp/Fnr family n=1 Tax=Desulfovibrio aespoeensis Aspo-2 RepID=D1U5Y5_9DELT Length = 220 Score = 123 bits (310), Expect = 3e-27, Method: Composition-based stats. Identities = 30/206 (14%), Positives = 71/206 (34%), Gaps = 8/206 (3%) Query: 4 SAFKDCFLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDF 63 + D + ++ R + + IV + F + G +++ + +G+ ++ Sbjct: 14 ANLDDDAVQALAERARTRVYGPGERIVSQSDNIQAFFIVLSGHVKIFRSNEDGKEQILYL 73 Query: 64 FAAPCFIGEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKN 123 P V A+E+ +P + + L L K+ TL+ + Sbjct: 74 VQEGQPFCFCTAFTDRPYPVNVTALEKSQVATIPAADMEDMARREPLLLLKIMQTLAGRL 133 Query: 124 YRNIVSLTQNQSFPLVNRLAAFILLSQEGDL--------YHEKHTQAAEYLGVSYRHLLY 175 + + R+A F++ ++ H + A+ +G + L Sbjct: 134 LEAMNMVESLALHGTQERIAHFLMHAETCSASGPGESFRLPVSHRELAKIVGTTPETLSR 193 Query: 176 VLAQFIHDGLLIKSKKGYLIKNRKQL 201 V+ +F + + + K I +R L Sbjct: 194 VIQKFKRNKTIEANGKTIRILDRNAL 219 >UniRef50_C6PUD3 Cyclic nucleotide-binding protein n=1 Tax=Clostridium carboxidivorans P7 RepID=C6PUD3_9CLOT Length = 225 Score = 123 bits (310), Expect = 3e-27, Method: Composition-based stats. Identities = 36/197 (18%), Positives = 74/197 (37%), Gaps = 3/197 (1%) Query: 11 LTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDFFAAPCFI 70 ++ +F + +++G+ + F + G A ++ NG+ + FI Sbjct: 24 PYEILKQWEIFKYKKGKMFLKQGEIYPYFFIIIEGEANIFIMSHNGKRYSQSIYTKGNFI 83 Query: 71 GEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKNYRNIVSL 130 GE+E+ + +++AI + LAL +++ D R + +S Y Sbjct: 84 GELEIFNNIPFSCSIEAITDIKLLALKREYFLKWYDMDKNISRYITEQMSFAFYTLSQKS 143 Query: 131 TQNQSFPLVNRLAAFILLS---QEGDLYHEKHTQAAEYLGVSYRHLLYVLAQFIHDGLLI 187 ++ + L R+ ++L A L V+ R L +F +G+L Sbjct: 144 AEDTLYTLRERICNYLLEEYSKSFKTNIKIDKDTLAAQLAVTKRSLNRTFMEFRKEGILE 203 Query: 188 KSKKGYLIKNRKQLSGL 204 S I + +L L Sbjct: 204 ISNSQVFINDLNKLKNL 220 >UniRef50_Q6MK24 Transcriptional regulatory protein n=1 Tax=Bdellovibrio bacteriovorus RepID=Q6MK24_BDEBA Length = 233 Score = 123 bits (310), Expect = 4e-27, Method: Composition-based stats. Identities = 35/189 (18%), Positives = 65/189 (34%), Gaps = 4/189 (2%) Query: 21 FHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDFFAAPCFIGEIELIDKDH 80 F A I G P +F + G +L A+G + +G + + Sbjct: 44 CRFKAGQIIFYSGNDPLGIFTIQSGLVKLEVISASGAAHTLRLVGPGGTLGYRSMFANEP 103 Query: 81 EPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKNYRNIVSLTQNQSFPLVN 140 + A+E+C +P + + KL +S Sbjct: 104 YHASAVAVEDCELCFVPKAEIMNIFKSYPELAMKLLSHISKDLRMAEEKWMDQMDKGASE 163 Query: 141 RLAAFILLSQEGDLYHEKHT--QAAEYLGVSYRHLLYVLAQFIHDGLL-IKSKKGYLIKN 197 R+A ++ Q H+ T + A++ G + ++ L+QF DGL+ + I + Sbjct: 164 RIAEALIFLQ-DHFAHQNWTRREIAQWAGTTPETVIRTLSQFEKDGLIDQTDGRSIRILS 222 Query: 198 RKQLSGLAL 206 R +L A Sbjct: 223 RDRLKDRAE 231 >UniRef50_C6IXS0 Transcription regulator n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6IXS0_9BACL Length = 236 Score = 123 bits (309), Expect = 5e-27, Method: Composition-based stats. Identities = 39/201 (19%), Positives = 69/201 (34%), Gaps = 7/201 (3%) Query: 14 VSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDFFAAPCFIGEI 73 + + R F + I +EG + LF ++RG +L NG+ LI F G+ Sbjct: 35 LHSVMRTSQFHKGEIIFREGDRSDSLFVVSRGIIKLTKLEDNGKEHLIRLLFPGDFFGQF 94 Query: 74 ELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKNYRNIVSLTQN 133 L+ + + A + + + +L D + LS + Sbjct: 95 SLLQEKPHYASAIAADTTGICRIHRSDFLDILRRDPDTAARFMTALSAQLEEADAWAAVL 154 Query: 134 QSFPLVNRLAAFILL-------SQEGDLYHEKHTQAAEYLGVSYRHLLYVLAQFIHDGLL 186 RLA +L + A +G + L L Q +G+L Sbjct: 155 TLLEADRRLAKMLLYFRRKAAPNSREFTLPVSKKDLASLIGATPETLSRKLRQLSDEGVL 214 Query: 187 IKSKKGYLIKNRKQLSGLALE 207 +++ LI++ L LA E Sbjct: 215 TVTRRQLLIRDEAALCHLAGE 235 >UniRef50_C7VXD9 Transcription regulator n=2 Tax=Enterococcus RepID=C7VXD9_ENTFA Length = 229 Score = 123 bits (308), Expect = 5e-27, Method: Composition-based stats. Identities = 34/202 (16%), Positives = 78/202 (38%), Gaps = 6/202 (2%) Query: 14 VSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDFFAAPCFIGEI 73 + +D F A +I Q L+ + G+ ++Y ++G+ +I F+GE+ Sbjct: 28 IQSDITEQAFSAGQFIYQAEDILESLYLIQEGKVKVYRLGSSGKEQVIRILEQGDFVGEL 87 Query: 74 ELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKNYRNIVSLTQN 133 L ++ H ++AI + +++ +LL+ +L ++ + Sbjct: 88 ALFEEQHYGCFIEAISPTKVCTIQKDNFKRILLSHPQIALELLSEMARRLDNTERLTAGI 147 Query: 134 QSFPLVNRLAAFIL-----LSQEGDLYHEKHTQAAEYLGVSYRHLLYVLAQFIHDGLLIK 188 + RL ++L + E + A YLG++ L L + + L+ + Sbjct: 148 TTERAETRLIQYLLEENIKQNTEQIKLETTKKELASYLGMTPETLSRYLTKLTRNNLIKQ 207 Query: 189 SKKGYL-IKNRKQLSGLALEMD 209 + + N +L L ++ Sbjct: 208 PIPNIIELTNVTELKNLMDKVR 229 >UniRef50_C5CIJ4 Transcriptional regulator, Crp/Fnr family n=1 Tax=Kosmotoga olearia TBF 19.5.1 RepID=C5CIJ4_KOSOT Length = 224 Score = 123 bits (308), Expect = 6e-27, Method: Composition-based stats. Identities = 40/192 (20%), Positives = 70/192 (36%), Gaps = 5/192 (2%) Query: 18 TRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDFFAAPCFIGEIELI- 76 R+ + A +++ G L L G+ + NG+V I+ AP + L Sbjct: 31 YRIEKYKAGEFVRFRGDSCDDLLILLDGKVKTEMQDFNGKVVRIEVMDAPSLLASGFLFA 90 Query: 77 DKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKNYRNIVSLTQNQSF 136 + P V I +C L +P K L + FL L + + L Sbjct: 91 TDNVFPVDVITITDCSFLTIPKKSVINLCRKNEKFLLNLLQDMGDRLVFLSEKLYMLTLR 150 Query: 137 PLVNRLAAFILLSQEGDL----YHEKHTQAAEYLGVSYRHLLYVLAQFIHDGLLIKSKKG 192 L ++A +IL + + ++ GV+ L A DG+L + Sbjct: 151 TLKEKIADYILSLCKDKQCEVSVPLTKEELSQVFGVARPSLSRAFADLARDGILEMDGRK 210 Query: 193 YLIKNRKQLSGL 204 +IK+ ++L L Sbjct: 211 IIIKDFEKLKAL 222 >UniRef50_Q65IZ1 Putative uncharacterized protein n=1 Tax=Bacillus licheniformis ATCC 14580 RepID=Q65IZ1_BACLD Length = 222 Score = 122 bits (307), Expect = 7e-27, Method: Composition-based stats. Identities = 33/208 (15%), Positives = 70/208 (33%), Gaps = 10/208 (4%) Query: 4 SAFKDCFLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDF 63 S D + + R ++ EG++ +F++ G + + +G +I Sbjct: 11 SGLNDEEFKQIEQIAAKRTYQPRMFVFMEGEEREAVFFIKSGLVKAFKIDEDGNEQVISI 70 Query: 64 FAAPCFIGEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKN 123 + D P +A++E + + + + LL+ K+ + K Sbjct: 71 LQNGDMFPHVGFFDLSPYPATAEAVQETELIVIRIADFNELLMKFPEMTIKVMQIMGKKI 130 Query: 124 YRNIVSLTQNQSFPLVNRLAAFIL-LSQEGDLYHEK---------HTQAAEYLGVSYRHL 173 + S + +RL ++ L+ E + EK + A +G S + Sbjct: 131 LDLQERIQGFISKDVQHRLTHVLMKLAAEHGIPQEKGVYISLPITNQDFANMVGTSRETI 190 Query: 174 LYVLAQFIHDGLLIKSKKGYLIKNRKQL 201 L + LL + G I + L Sbjct: 191 NRTLNELKKKNLLTADRSGIFIHDTDWL 218 >UniRef50_B7DNP2 Transcriptional regulator, Crp/Fnr family n=1 Tax=Alicyclobacillus acidocaldarius LAA1 RepID=B7DNP2_9BACL Length = 221 Score = 122 bits (307), Expect = 7e-27, Method: Composition-based stats. Identities = 33/205 (16%), Positives = 71/205 (34%), Gaps = 13/205 (6%) Query: 4 SAFKDCFLTDVSADTRL---FHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSL 60 S F+D +++ L + + I EG +++L RG ++ GR + Sbjct: 11 SLFRDLTPGELARVAELAVLRQYRRGETIFIEGTPRESVYFLVRGLVKVVKVDEEGREHV 70 Query: 61 IDFFAAPCFIGEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLS 120 + + P AIE+ A+ + + LL KL L+ Sbjct: 71 VAVLGKGQMFPHVGFFQDLPYPGTASAIEQTTVYAISTRAFDALLRRHPPIALKLLRVLA 130 Query: 121 HKNYRNIVSLTQNQSFPLVNRLAAFIL-LSQEGDLYHE---------KHTQAAEYLGVSY 170 + + L + + R+ AF+ ++E H + A+ +G+ Sbjct: 131 DRIVQLQAKLQELAVYDSRERVVAFLRHFAEEQGCVEPEGVRVHLPITHAEIAQMVGLRR 190 Query: 171 RHLLYVLAQFIHDGLLIKSKKGYLI 195 + + Q +G + + ++I Sbjct: 191 ESVNRIWNQLRREGAIEGERDTWVI 215 >UniRef50_Q2P9V8 Denitrification regulator T n=1 Tax=Thermus thermophilus RepID=Q2P9V8_THETH Length = 217 Score = 122 bits (307), Expect = 7e-27, Method: Composition-based stats. Identities = 40/207 (19%), Positives = 78/207 (37%), Gaps = 8/207 (3%) Query: 6 FKDCFLTDVSAD---TRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANG-RVSLI 61 F+D D+ A + + + EG+ LF + RG ++Y G + ++ Sbjct: 9 FRDLAPEDLEALERAAQRRLLGKGEVLFLEGEPVRALFVVKRGLIKVYKLDPEGRKQVVL 68 Query: 62 DFFAAPCFIGEIELIDKDH-EPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLS 120 + E+ L + P + +A+EE LA+P + + LL R L L+ Sbjct: 69 HVEGPGRVLAEVALFLERPTYPASAEALEESEVLAIPKERFFQLLEVRPQLARSLIRYLA 128 Query: 121 HKNYRNIVSLTQNQSFPLVNRLAAFILLS---QEGDLYHEKHTQAAEYLGVSYRHLLYVL 177 + R + L + + RL F+L + + + A LG + L Sbjct: 129 RRQERLLHLLDRLVFHEVRERLCEFLLERLAEEGQGFRLPTNPELAALLGTVPEAVSRNL 188 Query: 178 AQFIHDGLLIKSKKGYLIKNRKQLSGL 204 + GL+ + + + + + L L Sbjct: 189 GELYRRGLIRLAGRRVEVPDPEALRAL 215 >UniRef50_D1A2I7 Transcriptional regulator, Crp/Fnr family n=1 Tax=Thermomonospora curvata DSM 43183 RepID=D1A2I7_THECD Length = 243 Score = 122 bits (307), Expect = 8e-27, Method: Composition-based stats. Identities = 33/190 (17%), Positives = 66/190 (34%), Gaps = 11/190 (5%) Query: 24 LARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDFFAAPCFIGEIELIDKDHEPR 83 + + +G +Y+ RG+ +L + A+G +++ + GE + P Sbjct: 37 ERGEILFHQGDPVRGFYYVLRGQMQLTVSAADGTQKVVELVTSGESFGEAVVFAGQRYPV 96 Query: 84 AVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKNYRNIVSLTQNQSFPLVNRLA 143 A+ L + LL D F R++ ++ + R I + + R+ Sbjct: 97 TAGALVATRLLGISSGAVLDLLDRDPSFARRMLANMAVRLRRLIRDVEAYSLQSGIQRVI 156 Query: 144 AFILLSQEGD----------LYHEKHTQAAEYLGVSYRHLLYVLAQFIHDGLLIKSKKGY 193 F+L G+ L KH A L ++ L +L GL+ + Sbjct: 157 GFLLHEARGESGPAHECTVTLPTRKHV-LASRLNIAPETLSRILRDLSAAGLISVQGRRI 215 Query: 194 LIKNRKQLSG 203 + + L Sbjct: 216 TLHDVPALEA 225 >UniRef50_B2U6W1 Transcriptional regulator, Crp/Fnr family n=8 Tax=Ralstonia RepID=B2U6W1_RALPJ Length = 225 Score = 122 bits (307), Expect = 9e-27, Method: Composition-based stats. Identities = 38/210 (18%), Positives = 75/210 (35%), Gaps = 7/210 (3%) Query: 1 MSESAFKDCFLTD----VSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANG 56 + S F D ++ D+ D+ + G + + G +L A+G Sbjct: 11 LKHSPLFLDFDNDDIALLARDSHAVRVSRHDFAFRRGDHADGFYVVVVGAIKLVLPGAHG 70 Query: 57 RVSLIDFFAAPCFIGEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLC 116 + +I+FF + GE + QA+E+ + + + L R++ Sbjct: 71 QCKVIEFFGPGEWFGEPFMFLNRPHAADAQAMEDSLLVWIGKRGVDDALHVHPRLARQML 130 Query: 117 VTLSHKNYRNIVSLTQNQSFPLVNRLAAFILLSQ---EGDLYHEKHTQAAEYLGVSYRHL 173 LS + + + + RL ++L + + + A LG++ L Sbjct: 131 TGLSTRLHTLMCDIETVNLQSANERLIGYLLSLPRKFDRTRFPCSKSLVASKLGLAPATL 190 Query: 174 LYVLAQFIHDGLLIKSKKGYLIKNRKQLSG 203 L Q I DGL+ + +I+N L Sbjct: 191 SRTLRQLIRDGLIRVEGREVVIQNTTALQR 220 >UniRef50_B8G0V1 Transcriptional regulator, Crp/Fnr family n=2 Tax=Desulfitobacterium hafniense RepID=B8G0V1_DESHD Length = 228 Score = 122 bits (306), Expect = 1e-26, Method: Composition-based stats. Identities = 31/190 (16%), Positives = 72/190 (37%), Gaps = 9/190 (4%) Query: 21 FHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDFFAAPCFIGEIELIDKDH 80 H+ +++ ++ Q + L L +G+ ++ + + G + AP GE E +D+ Sbjct: 28 RHYQKGEFVFEKDQPSNGLICLKKGKVKVSSFFSEGSEKIFGILVAPALFGETETLDQGP 87 Query: 81 EPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKNYRNIVSLTQNQSFPLVN 140 + A+ +A+ + L+ + ++ K + + + Sbjct: 88 RMVSATALTHVEIVAISGNKTKELIYTYPDIALSIIQSIGVKLRWTTLQAEDLSTQKIEY 147 Query: 141 RLAAFILLSQEGDLYHEK---------HTQAAEYLGVSYRHLLYVLAQFIHDGLLIKSKK 191 RLA +L + ++ K H + A ++G + + L +F H GL+ + Sbjct: 148 RLARLLLDFKHYGIFTSKNNDNCLMITHEELAHFIGTARSKVTTYLNEFAHKGLIRLRRG 207 Query: 192 GYLIKNRKQL 201 I + L Sbjct: 208 EIRILDTAGL 217 >UniRef50_B8G033 Transcriptional regulator, Crp/Fnr family n=2 Tax=Desulfitobacterium hafniense RepID=B8G033_DESHD Length = 224 Score = 121 bits (305), Expect = 1e-26, Method: Composition-based stats. Identities = 41/209 (19%), Positives = 76/209 (36%), Gaps = 9/209 (4%) Query: 4 SAFKDCFLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDF 63 S+ D L + + + + EG+ S ++++ G+ +L TL NG ++D+ Sbjct: 14 SSLADEDLLPLLPQFKTRKYRKGQILFIEGEIGSQVYFILEGQVKLSKTLPNGDEQILDW 73 Query: 64 FAAPCFIGEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKN 123 + EI L++ P + ++E L L + +L N L L+ + Sbjct: 74 CGPKDSLAEILLVEPGSYPATAEVLKESTLLVLSNQGMVKILENHPRLAVALIRKLNMRL 133 Query: 124 YRNIVSLTQNQSFPLVNRLAAFILLSQ-------EGDLYHEKHT--QAAEYLGVSYRHLL 174 N + S LA +L E Y T A +G S + Sbjct: 134 RMNQEFIRILTSRSTAGILAMLLLRMAKPASSPGEPIYYDATLTNKDLASMIGTSRELVN 193 Query: 175 YVLAQFIHDGLLIKSKKGYLIKNRKQLSG 203 L Q+ G+L ++ I +L+ Sbjct: 194 RTLNQWKKSGVLCLNEDRMEILRPHELAD 222 >UniRef50_Q11W09 Transcriptional regulator n=2 Tax=Bacteroidetes RepID=Q11W09_CYTH3 Length = 355 Score = 121 bits (305), Expect = 1e-26, Method: Composition-based stats. Identities = 32/200 (16%), Positives = 71/200 (35%), Gaps = 9/200 (4%) Query: 14 VSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDFFAAPCFIGEI 73 +S ++ F + + EG + + L+++ G+ + Y T +GR + + F+G + Sbjct: 154 ISDQRKISRFKKKQILYSEGNKANSLYFIVSGKLKTYKTNDDGRELITGLYKEGDFLGYM 213 Query: 74 ELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKNYRNIVSLTQN 133 L++ + +++ +P + +L + K LS L + Sbjct: 214 NLLEGSDHTESAMMLDDSEIHIIPKDEFFAVLFSSKDVSEKFIKMLSDNLIEKEERLLKL 273 Query: 134 QSFPLVNRLAAFILLSQEGDLYHEK---------HTQAAEYLGVSYRHLLYVLAQFIHDG 184 + R+A + + E A G S ++ L+ F +G Sbjct: 274 AYNSVRKRVAESLFMIYSNFHKDEDPSDFTMAIYRDDLAAIAGASKETVIRTLSDFKDEG 333 Query: 185 LLIKSKKGYLIKNRKQLSGL 204 L+ I N +L + Sbjct: 334 LISIQGSKISIINLDKLQKM 353 >UniRef50_C7PGI3 Transcriptional regulator, Crp/Fnr family n=1 Tax=Chitinophaga pinensis DSM 2588 RepID=C7PGI3_CHIPD Length = 248 Score = 121 bits (304), Expect = 2e-26, Method: Composition-based stats. Identities = 36/201 (17%), Positives = 74/201 (36%), Gaps = 10/201 (4%) Query: 14 VSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDFFAAPCFIGEI 73 + +D +F I +E ++Y+ G+ + Y NG +I A IG Sbjct: 44 LLSDAVAQNFRKGQIIFRENNPAFGIYYIKEGKVKKYKQDRNGNEHIIYVANAGELIGYH 103 Query: 74 ELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKNYRNIVSLTQN 133 ++ + P + A+E+C +P + + + R L LSH+ SL+ Sbjct: 104 AILADNTYPDSAAALEDCMIAFIPRDAFLLAIESSANLSRHLLGALSHEYNVLSNSLSIV 163 Query: 134 QSFPLVNRLA-AFILLSQE---------GDLYHEKHTQAAEYLGVSYRHLLYVLAQFIHD 183 RLA + I+L ++ A + +++ +L + D Sbjct: 164 ARHSAKERLAISLIVLREKYKSSEYDTGDICITISRKDLASMTATTEENVVRMLKELKKD 223 Query: 184 GLLIKSKKGYLIKNRKQLSGL 204 ++ + +I + K L + Sbjct: 224 NIVGTIGRKIIIYDVKSLIKM 244 >UniRef50_A1VYI2 Transcriptional regulator, putative n=15 Tax=Campylobacter RepID=A1VYI2_CAMJJ Length = 201 Score = 121 bits (304), Expect = 2e-26, Method: Composition-based stats. Identities = 45/192 (23%), Positives = 81/192 (42%), Gaps = 2/192 (1%) Query: 10 FLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDFFAAPCF 69 +L +S+ +L F + EG++ F L +G+ R+Y + A+ + + +F P F Sbjct: 7 YLELLSSVGKLKKFQKNSILFYEGEEAKKFFILLKGKIRIYKSTASDKEITLHYFNPPNF 66 Query: 70 IGEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKNYRNIVS 129 I E+ K + P E+ L + +++ L + F L +L K Sbjct: 67 IAEMPAFKKLNYPANAIFEEDGEILEIDFINFQNLCSENKEFNFLLISSLFDKIKILEKK 126 Query: 130 LTQNQSFPLVNRLAAFILLSQEGDLYHEKHTQAAEYLGVSYRHLLYVLAQFIHDGLLIKS 189 L+QN + L RL ++L +++ L Q A L V + L VL + L+ Sbjct: 127 LSQN-ALDLRTRLLKYLLENEKN-LDTISQKQIAIDLNVRAQSLSRVLKELKISELIDTK 184 Query: 190 KKGYLIKNRKQL 201 K I N+ + Sbjct: 185 KGRIEILNKDMI 196 >UniRef50_Q5SID7 Transcription regulator, Crp family n=3 Tax=Thermus RepID=Q5SID7_THET8 Length = 216 Score = 121 bits (304), Expect = 2e-26, Method: Composition-based stats. Identities = 37/195 (18%), Positives = 70/195 (35%), Gaps = 3/195 (1%) Query: 14 VSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDFFAAPCFIGEI 73 + + + I +G L+ + G+ RL+ T G+ + GE+ Sbjct: 18 ALSYFQRRLYPQGKPIFYQGDLGQALYLVASGKVRLFRTHLGGQERTLALLGPGELFGEM 77 Query: 74 ELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKNYRNIVSLTQN 133 L+D+ + A+E+ LAL + Y L+ L L L+ + + L Sbjct: 78 SLLDEGERSASAVAVEDTELLALFREDYLALIRRLPLVAHNLAALLARRLREADLELDLL 137 Query: 134 QSFPLVNRLAAFILLSQEGD---LYHEKHTQAAEYLGVSYRHLLYVLAQFIHDGLLIKSK 190 NR+A +L L+ +H + A G S + VL +G++ Sbjct: 138 SFEEARNRVAYALLKLLRQGLGPLFQIRHHELAALAGTSRETVSRVLHALAEEGVVRLGP 197 Query: 191 KGYLIKNRKQLSGLA 205 ++ L +A Sbjct: 198 GTVEVREAALLEEIA 212 >UniRef50_UPI0001B46169 Crp/FNR family transcriptional regulator n=1 Tax=Mycobacterium intracellulare ATCC 13950 RepID=UPI0001B46169 Length = 219 Score = 121 bits (303), Expect = 2e-26, Method: Composition-based stats. Identities = 36/205 (17%), Positives = 64/205 (31%), Gaps = 10/205 (4%) Query: 18 TRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDFFAAPCFIGEIELID 77 F I +G L+ + G + GR + GE+ + D Sbjct: 1 MYTCEFRPGQTIFAQGDPGDRLYLIAEGTVTISLRDPAGRTGVRAILGPADIFGELAVFD 60 Query: 78 KDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKNYRNIVSLTQNQSFP 137 A+ E L L R + D +L L+ + L + S Sbjct: 61 PAPRACTATALTEVRALWLDRASLRASMARDPALAEQLLRALTRRVRAAERQLVEMVSSD 120 Query: 138 LVNRLAAFILL------SQEGDLYHEKHT----QAAEYLGVSYRHLLYVLAQFIHDGLLI 187 + R+A +L ++EG H + A+ +G + L F G + Sbjct: 121 VNARVARQLLALGRRFGTREGGALRVAHELSQDELAQLVGADRVSVNKALGSFTTRGWIS 180 Query: 188 KSKKGYLIKNRKQLSGLALEMDPEN 212 K +I N L+ A ++ + Sbjct: 181 LRGKTVVIINPDALARRAGDVGGAD 205 >UniRef50_B0TI91 Transcriptional regulator, crp/fnr family, putative n=1 Tax=Heliobacterium modesticaldum Ice1 RepID=B0TI91_HELMI Length = 235 Score = 121 bits (303), Expect = 2e-26, Method: Composition-based stats. Identities = 31/189 (16%), Positives = 70/189 (37%), Gaps = 10/189 (5%) Query: 24 LARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDFFAAPCFIGEIELIDKDHEPR 83 R ++QEG+ +++L G+ RL +G+ ++ GEI D P Sbjct: 40 KRRQPLLQEGEPADAVYFLHEGKVRLAKMNPDGQEKVLSIVDPGDIFGEIVAFDPGPSPY 99 Query: 84 AVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKNYRNIVSLTQNQSFPLVNRLA 143 + +E LP+K +R L+ + + + + + R+A Sbjct: 100 TAETMEPARVSRLPLKEFRQLVSDHPSLAAACLQVEARRLRQAYRHMKNLALLDTHGRVA 159 Query: 144 AFILLSQEG----------DLYHEKHTQAAEYLGVSYRHLLYVLAQFIHDGLLIKSKKGY 193 A + ++ + A+ +G S + +LA++ +L ++ Sbjct: 160 ARLFKLAHDYGVPDSRGTRIDFNLTRQELAQIVGTSRETVSRILAEYERLKILEVERQQI 219 Query: 194 LIKNRKQLS 202 +I + ++L Sbjct: 220 VICDLEELK 228 >UniRef50_A8F6Y0 Putative transcriptional regulator, Crp/Fnr family n=1 Tax=Thermotoga lettingae TMO RepID=A8F6Y0_THELT Length = 233 Score = 121 bits (303), Expect = 2e-26, Method: Composition-based stats. Identities = 35/195 (17%), Positives = 72/195 (36%), Gaps = 3/195 (1%) Query: 20 LFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDFFAAPCFIGEIELI-DK 78 L F +Y+ + +L L G Y G++ ++ +P + L Sbjct: 33 LQKFARDEYVAHATETCDYLMLLLSGEVVTYMEDKEGKILQLEAIKSPDVLASAVLFSTD 92 Query: 79 DHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKNYRNIVSLTQNQSFPL 138 P + A +C L + + FL+ L + + L + L Sbjct: 93 AVLPVDIVARTDCRILFIRKDKILDYCQRNEKFLKNLLCDMGDRLLFLAKKLHELTFGTL 152 Query: 139 VNRLAAFILLSQEGDLYHE--KHTQAAEYLGVSYRHLLYVLAQFIHDGLLIKSKKGYLIK 196 +R+A +I+ + D + + A + V + V QF +G+LI++ + I Sbjct: 153 RSRIAKYIVQHAKEDEFILPVSKEELARFFAVPRPSVSRVFMQFEREGILIQNGRKIKIL 212 Query: 197 NRKQLSGLALEMDPE 211 +R L L+ ++ + Sbjct: 213 DRSSLEKLSEKLGDD 227 >UniRef50_D0LG24 Transcriptional regulator, Crp/Fnr family n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LG24_HALO1 Length = 229 Score = 120 bits (302), Expect = 3e-26, Method: Composition-based stats. Identities = 35/204 (17%), Positives = 68/204 (33%), Gaps = 10/204 (4%) Query: 11 LTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDFFAAPCFI 70 L ++ L RD I G LF++ GR ++ +G+ + + Sbjct: 25 LARLAERVELREIRRRDVIYLPGDPGGSLFFVNGGRVKISKVTRDGKALTLSYCGPSEIF 84 Query: 71 GEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKNYRNIVSL 130 GE L+ +A+E + + LL ++ L+ + L Sbjct: 85 GEGCLVGGGPREEMAEAMENAMVTEVERDQFEQLLREYAHLGFQMTKLLAKRRLDLENKL 144 Query: 131 TQNQSFPLVNRLAAFIL--------LSQEGDLYHEK--HTQAAEYLGVSYRHLLYVLAQF 180 + ++LA +L G L K H + A +G + + L+QF Sbjct: 145 ETLVFRDVTSKLAELLLNLADEYGVEDSRGTLVALKITHQELANLIGSTRETVSLTLSQF 204 Query: 181 IHDGLLIKSKKGYLIKNRKQLSGL 204 + + +I + + L L Sbjct: 205 KKQRYICTEGRKVIISDTESLRAL 228 >UniRef50_C9RRN7 Transcriptional regulator, Crp/Fnr family n=1 Tax=Fibrobacter succinogenes subsp. succinogenes S85 RepID=C9RRN7_FIBSS Length = 236 Score = 120 bits (302), Expect = 3e-26, Method: Composition-based stats. Identities = 36/220 (16%), Positives = 81/220 (36%), Gaps = 16/220 (7%) Query: 4 SAFKDCFLTDVSADTRLFHFLARDYIVQEGQQP-SWLFYLTRGRARLYATLANGRVSLID 62 S + L ++ + ++ + +V EG L+ + G ++Y T +GR +++ Sbjct: 16 SELNEEQLGMIANLVIVKNYNRDETVVLEGDDSVQALYLIAMGSVQVYMTGIDGRETILS 75 Query: 63 FFAAPCFIGEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHK 122 F F GE+ LID + +V+ + + L + + + L+ L L + Sbjct: 76 FLERGDFFGEMSLIDGEPRSASVRTVTDAKLLVIHRESFLSLIRKTPEIAMALMSELCKR 135 Query: 123 NYRNIVSLTQNQSFPLVNRLAAFIL-LSQEGDL--------------YHEKHTQAAEYLG 167 + + + + R+A +L L QE + Q A+ G Sbjct: 136 LRKANKQIGSLSTMSVSGRVAGTLLNLMQERGVRIHTDNGNMVTVIHNRPTQQQLADMSG 195 Query: 168 VSYRHLLYVLAQFIHDGLLIKSKKGYLIKNRKQLSGLALE 207 + + + + + + + K +I + L A + Sbjct: 196 TTRETVSRICSLLVKTNAIAMTGKDIVIFDEDMLQEKATK 235 >UniRef50_C6HW21 Putative transcriptional regulator, Crp/Fnr family n=1 Tax=Leptospirillum ferrodiazotrophum RepID=C6HW21_9BACT Length = 242 Score = 120 bits (302), Expect = 3e-26, Method: Composition-based stats. Identities = 37/200 (18%), Positives = 73/200 (36%), Gaps = 10/200 (5%) Query: 14 VSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDFFAAPCFIGEI 73 ++ +++ + IV+ + S ++ L G ++ A GR + + F GE+ Sbjct: 38 LAIFSKIRRYRPGHRIVEANEVGSEMYLLLSGSVKVSAEDPAGREITLAVLYSGDFFGEV 97 Query: 74 ELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKNYRNIVSLTQN 133 L D V+ +E +++P L+ +L TLS + L Sbjct: 98 SLWDNRGRTATVETLEPSQVVSIPGPPLLDLMRESPDMAFRLLTTLSARLRETDAKLMHM 157 Query: 134 QSFPLVNRLAAFILL--SQEGDLYHE--------KHTQAAEYLGVSYRHLLYVLAQFIHD 183 ++A +L ++EG L E + A GV+ + L F Sbjct: 158 AYGDSYQKVARSLLEIYTKEGGLDGETPFIPDRFTRQELASLSGVTRETVSRSLGAFTMA 217 Query: 184 GLLIKSKKGYLIKNRKQLSG 203 G++ K +I + +L Sbjct: 218 GVIRLEKDRIVILSLDRLKK 237 >UniRef50_C4XN52 Crp family transcriptional regulator n=2 Tax=Desulfovibrio RepID=C4XN52_DESMR Length = 251 Score = 120 bits (302), Expect = 3e-26, Method: Composition-based stats. Identities = 40/213 (18%), Positives = 73/213 (34%), Gaps = 8/213 (3%) Query: 11 LTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDFFAAPCFI 70 L ++A + + I + + GRA+LY +GR + Sbjct: 24 LARMAAGAVVSRHGPGELIAARSDAGEAFYLVASGRAKLYQIGPDGREQTLYILGPGEPF 83 Query: 71 GEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKNYRNIVSL 130 L+D P A+E+ LA P + D L L + + + + Sbjct: 84 CLCSLVDDGEFPAFAAALEDTRVLAFPARTLAAAAREDPEVLFDLLRLMCRRLKQTQAMV 143 Query: 131 TQNQSFPLVNRLAAFILLSQEGDL------YHEKHTQAAEYLGVSYRHLLYVLAQFIHDG 184 PL RLA F+L + H + A+ +G + L + G Sbjct: 144 ESLALLPLTGRLAGFLLHEADRSPGTGPVRLAISHRELAKIVGATPEALSRAFRKLAEAG 203 Query: 185 LLIKSKKGYLIKNRKQLSGLA--LEMDPENKFS 215 L+ + + + +R L+ A E++ E K + Sbjct: 204 LVTVTGRDVALHDRPALAAEAGRAEVEEEEKSA 236 >UniRef50_A7VNU9 Putative uncharacterized protein n=1 Tax=Clostridium leptum DSM 753 RepID=A7VNU9_9CLOT Length = 229 Score = 120 bits (302), Expect = 3e-26, Method: Composition-based stats. Identities = 29/198 (14%), Positives = 65/198 (32%), Gaps = 6/198 (3%) Query: 15 SADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDFFAAPCFIGEIE 74 + + + I + +Q + + +GR +++ + NG I +GE Sbjct: 33 AKNLPTRTYEKDQMIYWQEEQADCFYCIKKGRVKVFLSSENGMEKTITIVEQG-ILGEAA 91 Query: 75 LIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKNYRNIVSLTQNQ 134 D + +A+ + +A+ D L ++H+ + Sbjct: 92 FFDHMPRVSSAKALVKTELIAINRNGLIKSFSQDPDLAVHLLELMAHRVRLLSEQVDNMT 151 Query: 135 SFPLVNRLAAFILLSQ---EGDLYHEK--HTQAAEYLGVSYRHLLYVLAQFIHDGLLIKS 189 R+A +L E + H + A G + + +L +F +G + Sbjct: 152 FLQADQRVAQALLRHAVPGEDGILQVNLTHEEIANLAGTTRVTVSKLLTRFAKNGWIGTR 211 Query: 190 KKGYLIKNRKQLSGLALE 207 + +KN L + E Sbjct: 212 YRAVALKNPAALRSFSKE 229 >UniRef50_Q0TRP4 Transcriptional regulator, Crp/Fnr family n=8 Tax=Clostridium perfringens RepID=Q0TRP4_CLOP1 Length = 236 Score = 120 bits (302), Expect = 3e-26, Method: Composition-based stats. Identities = 36/204 (17%), Positives = 86/204 (42%), Gaps = 14/204 (6%) Query: 14 VSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDFFAAPCFIGEI 73 ++ FHF +YI EG++ S LF +++G + G+ ++ F+ + GE Sbjct: 32 LATGMTCFHFNKGEYICYEGEKLSKLFIISKGSVKTSKLTKGGKEQIMHIFSIGDYFGET 91 Query: 74 ELIDKD-HEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKNYRNIVSLTQ 132 L + + A+ + A+ +L + + +L+++ + Sbjct: 92 SLFNNEGGILFNAIALNDVIVCAVDKDKVDSVLEENPRIAIVVLKSLTNRLKDTEEFAHK 151 Query: 133 NQSFPLVNRLAAFILLS--------QEGDLYHE---KHTQAAEYLGVSYRHLLYVLAQFI 181 + + R+A ++L + G+++ + A Y G++ + L+ F Sbjct: 152 LVTNDVRVRIA-YMLKEFKRKYGKIENGEIFIDLPINREDMANYCGITRETMSRKLSIFE 210 Query: 182 HDGLLI-KSKKGYLIKNRKQLSGL 204 H+GL+ + K +IK+ ++L+ + Sbjct: 211 HEGLIEIRGNKSLIIKDIERLNKI 234 >UniRef50_UPI0001C31809 transcriptional regulator, Crp/Fnr family n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C31809 Length = 231 Score = 120 bits (301), Expect = 3e-26, Method: Composition-based stats. Identities = 31/211 (14%), Positives = 68/211 (32%), Gaps = 13/211 (6%) Query: 6 FKDCFLTDVSADTRL---FHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLID 62 F+ ++S + + I +EG + L G R+ A+GR + Sbjct: 18 FEALGPEELSRVAEVAVPRRYEPGRVIFREGDASDTCYVLKNGHVRVIREHADGRTITLA 77 Query: 63 FFAAPCFIGEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHK 122 F GE+ + + + ++ +++ +A+ R L+ KL V+L + Sbjct: 78 NFGPGDIFGELAMFEDERRSATIETLDDVEAIAILGSDMRRLMREHPDIAVKLVVSLGRR 137 Query: 123 NYRNIVSLTQNQSFPLVNRLAAFILLS----------QEGDLYHEKHTQAAEYLGVSYRH 172 + + +R+A + + L A+ G S Sbjct: 138 LRAANERIASQSFQTVQSRVANVVTQLVKEAQDEGAGERDVLVSATQADIAKLAGSSRES 197 Query: 173 LLYVLAQFIHDGLLIKSKKGYLIKNRKQLSG 203 LA G++ + + + + L Sbjct: 198 ASRFLAVLERAGVIEQGRGKLTVHDPSALER 228 >UniRef50_A9GWE0 Global nitrogen regulatory protein, CRP family of transcriptional regulators n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=A9GWE0_SORC5 Length = 253 Score = 120 bits (301), Expect = 4e-26, Method: Composition-based stats. Identities = 38/201 (18%), Positives = 75/201 (37%), Gaps = 10/201 (4%) Query: 12 TDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDFFAAPCFIG 71 + ++ + ++V +G + L L+ GR RL +++GR + + A +G Sbjct: 50 SALADGGTIQRVAKGRHLVTQGDAATALAMLSLGRVRLVRGMSDGRSLSLGYRGAGDVLG 109 Query: 72 EIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKNYRNIVSLT 131 E L + A E+ L +P+ R L+ D F + TL ++ L Sbjct: 110 EAALGGVTAHRESAIATEDVEALLVPLATVRNLMATDANFAAAIVTTLVERHTDTEERLA 169 Query: 132 QNQSFPLVNRLAAFILLSQE--------GDLYHE--KHTQAAEYLGVSYRHLLYVLAQFI 181 + RL F+L + G L H + A +G + + L Sbjct: 170 SMLFRNVEARLCEFLLKAATRWGIPDPRGVLISAPFTHQEMASMIGSTRETVTLTLGDLR 229 Query: 182 HDGLLIKSKKGYLIKNRKQLS 202 G++ ++ ++ +R L Sbjct: 230 RKGVIEIDRRRIVVLDRDALK 250 >UniRef50_C5ELS6 Transcriptional regulator n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5ELS6_9FIRM Length = 219 Score = 120 bits (301), Expect = 4e-26, Method: Composition-based stats. Identities = 34/196 (17%), Positives = 67/196 (34%), Gaps = 11/196 (5%) Query: 22 HFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDFFAAPCFIGEIELIDKDHE 81 F + ++ +G ++ + GR R+ + +G C IGE I Sbjct: 17 MFRKKAFLFHQGDPADAVYIVLSGRIRITSYQIDGEEKQFYIAEKGCLIGEASCILGHPH 76 Query: 82 PRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKNYRNIVSLTQNQSFPLVNR 141 + AI + +P + D R + + KN + + + V R Sbjct: 77 STSAVAIVDTEVYCIPHVELEAGMKADWELTRTVMRMMCRKNSISFNQVLELSFTQSVQR 136 Query: 142 LAAFI--LLSQEG---------DLYHEKHTQAAEYLGVSYRHLLYVLAQFIHDGLLIKSK 190 +A + L +Q G H + + S + V + F +G+L K Sbjct: 137 VAQLVVHLCNQYGVKEDTGAVRIDIRFTHQDVSSMINTSRVTVSNVFSLFADEGILEKVN 196 Query: 191 KGYLIKNRKQLSGLAL 206 +++ + +L LA Sbjct: 197 GLFVVTDFGKLESLAS 212 >UniRef50_Q8KBR5 Transcriptional regulator, Crp/Fnr family n=1 Tax=Chlorobaculum tepidum RepID=Q8KBR5_CHLTE Length = 225 Score = 119 bits (300), Expect = 4e-26, Method: Composition-based stats. Identities = 34/204 (16%), Positives = 70/204 (34%), Gaps = 11/204 (5%) Query: 14 VSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDFFAAPCFIGEI 73 + L F + EG L +L GR ++Y L G+ + F G + Sbjct: 18 LEKYLTLRSFRKGQLLWSEGDTDGLLVFLKSGRVKIYRLLPMGKAITLYIFGKGSVFGFM 77 Query: 74 ELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKNYRNIVSLTQN 133 D P QA+++C + R + D L L+ + ++ + Sbjct: 78 PFFDDAPYPAYAQALDDCEADVISRSGLRQAVHQDPEVAIVLMKQLAQRLRDAFDTIERL 137 Query: 134 QSFPLVNRLAAFILLSQEGDLYHEKH----------TQAAEYLGVSYRHLLYVLAQFIHD 183 QS ++AA ++ + + A+ LG++ L + + Sbjct: 138 QSKGANPKVAAALMALMDDSPNIAGRPLFITLPVASHEFAQSLGLTPETLSRSITHLVEK 197 Query: 184 GLLIK-SKKGYLIKNRKQLSGLAL 206 +L + + + I + + L +A Sbjct: 198 NILKRLQRNRFQILDLEALEKVAE 221 >UniRef50_A6L4K6 Transcriptional regulator n=13 Tax=Bacteroides RepID=A6L4K6_BACV8 Length = 196 Score = 119 bits (300), Expect = 4e-26, Method: Composition-based stats. Identities = 32/171 (18%), Positives = 64/171 (37%), Gaps = 5/171 (2%) Query: 19 RLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDFFAAPCFIGEIELI-D 77 L HF D I ++G L+ L G R G+ ++ AP + + Sbjct: 30 SLKHFEPGDIIARQGDLCKGLYILASGSVRAGMINDEGKELTVEEIGAPNLLASAFIFAT 89 Query: 78 KDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKNYRNIVSLTQNQSFP 137 ++ P V+AI C + + + + L ++ +S ++ L + Sbjct: 90 ENRFPVNVEAIGPCEVFVIGKERFLEFMRLHPLMMQNFLKDISDRSVFLSRKLNEFALLN 149 Query: 138 LVNRLAAFILLSQEGDLYHEKHTQAAEYLGVSYRHLLYVLAQFIHDGLLIK 188 L RL ++ + A+ LGV+ L L++ +++G + K Sbjct: 150 LKTRLLKYLETHS----VIHNQQEVAQKLGVTRPSLARALSELVNEGKIKK 196 >UniRef50_C8N8N0 Crp/Fnr family transcriptional regulator n=1 Tax=Cardiobacterium hominis ATCC 15826 RepID=C8N8N0_9GAMM Length = 220 Score = 119 bits (300), Expect = 5e-26, Method: Composition-based stats. Identities = 34/198 (17%), Positives = 73/198 (36%), Gaps = 8/198 (4%) Query: 14 VSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDFFAAPCFIGE- 72 ++ + A + + Q+ + F + G RLY + +G+ + F+ GE Sbjct: 22 LTRHQHRRRYSAGSMVFTKNQKTTDFFIVLSGTVRLYFSAPDGKEKTVKLFSRGQSFGEA 81 Query: 73 IELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKNYRNIVSLTQ 132 + + D P A E+ L + + +R +LL + + T++ + Sbjct: 82 LMFMRHDTYPANAIATEDTELLVISNREFRDILLKNVELCLAIMGTMAEYVQILSSQIEM 141 Query: 133 NQSFPLVNRLAAFILLSQEGD-------LYHEKHTQAAEYLGVSYRHLLYVLAQFIHDGL 185 F RL ++ +G+ AEYL + L +L Q + + Sbjct: 142 LSVFDARTRLLHYLRDHMQGERKNGTLYPLDINKKDLAEYLAIRPETLSRLLKQLEQEAV 201 Query: 186 LIKSKKGYLIKNRKQLSG 203 L+ ++G + + +L Sbjct: 202 LVWDQRGVRVHDWAKLKD 219 >UniRef50_D0LJM6 Transcriptional regulator, Crp/Fnr family n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LJM6_HALO1 Length = 251 Score = 119 bits (299), Expect = 6e-26, Method: Composition-based stats. Identities = 40/205 (19%), Positives = 70/205 (34%), Gaps = 10/205 (4%) Query: 4 SAFKDCFLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDF 63 +A + D+S + A +V + + +F + GR ++ NGR + Sbjct: 35 AALPISAIEDLSQRVAVRKVTAHHTVVTQDEPGETMFLIMSGRIKVVIFGENGREVTLSI 94 Query: 64 FAAPCFIGEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKN 123 GE+ L D + A+E C LAL + L N L ++ + Sbjct: 95 LRPGDAFGEMSLFDGEARSANCVALEACTLLALSREDLLRHLANHPRTTLNLLGEMARRL 154 Query: 124 YRNIVSLTQNQSFPLVNRLAAFI--LLSQEGDLYHE--------KHTQAAEYLGVSYRHL 173 R S+ Q + RL + L +EG E + A +G + Sbjct: 155 RRADESIAQLALCDVNERLVHQLVSLAREEGVDAPEGVLVRRRPTQQELANMIGSCRETI 214 Query: 174 LYVLAQFIHDGLLIKSKKGYLIKNR 198 Q DGL+I + ++ Sbjct: 215 SRAFNQLARDGLIIPRGRAMVVTQE 239 >UniRef50_A1ZR18 Transcriptional Regulator, Crp/Fnr family, putative n=1 Tax=Microscilla marina ATCC 23134 RepID=A1ZR18_9SPHI Length = 250 Score = 119 bits (299), Expect = 7e-26, Method: Composition-based stats. Identities = 33/193 (17%), Positives = 73/193 (37%), Gaps = 8/193 (4%) Query: 21 FHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDFFAAPCFIGEIELIDKDH 80 F + E P+ +F + GRA+++ T +G+ + + +G L+ + Sbjct: 53 LTFKKGKLVFYEEGIPTGVFIIESGRAKIFKTGLDGKDQIFYIYKQGDLLGYHALLCNEK 112 Query: 81 EPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKNYRNIVSLTQNQSFP--- 137 + +A+E+C L + + + LL L +SH+ + ++T P Sbjct: 113 YADSCEALEDCQMLFINQRKFEQLLTQIPHLQALLIQNMSHEFGVMVNTITVLAQKPLRE 172 Query: 138 -----LVNRLAAFILLSQEGDLYHEKHTQAAEYLGVSYRHLLYVLAQFIHDGLLIKSKKG 192 L+ + + + A +G + L +L +F + L++ K Sbjct: 173 RLALFLLLLEQKYSETTGKPGKIVLPREDLANIVGTARESLGRLLKEFREEKLILIENKA 232 Query: 193 YLIKNRKQLSGLA 205 + N +L +A Sbjct: 233 ITLINPTRLHQMA 245 >UniRef50_B9M2U2 Transcriptional regulator, Crp/Fnr family n=2 Tax=Geobacter RepID=B9M2U2_GEOSF Length = 236 Score = 119 bits (299), Expect = 7e-26, Method: Composition-based stats. Identities = 32/210 (15%), Positives = 79/210 (37%), Gaps = 10/210 (4%) Query: 4 SAFKDCFLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDF 63 ++ D L+ + F + I+ E +++ ++ G+ ++ + +G+ ++ Sbjct: 26 ASLTDDQLSSLMGIIEEKKFFRNNVILWEEDTQRYMYIVSSGKVKVVQSSEDGKEHILAI 85 Query: 64 FAAPCFIGEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKN 123 + GE+ ++D P V A+E+ + + + LL + + +L L H+ Sbjct: 86 HKKGEYFGEMAILDGKTAPATVIAMEDSLIQLIARESFEKFLLQNEKVMNQLISMLCHRL 145 Query: 124 YRNIVSLTQNQSFPLVNRLAAFI--------LLSQEGDLYHEK--HTQAAEYLGVSYRHL 173 + + L R+ A + + + G + K H A Y VS + Sbjct: 146 RESWLMLKVMSFSSAEQRVRAVLDQLGKLNGVRDERGIIIALKLMHKDIAGYANVSRETV 205 Query: 174 LYVLAQFIHDGLLIKSKKGYLIKNRKQLSG 203 +L +F + + Y++ + Sbjct: 206 TRLLNRFAKESKIEILDNKYILLKEHSVES 235 >UniRef50_Q4ZZV6 Cyclic nucleotide-binding n=5 Tax=Pseudomonas syringae group RepID=Q4ZZV6_PSEU2 Length = 236 Score = 119 bits (299), Expect = 7e-26, Method: Composition-based stats. Identities = 43/200 (21%), Positives = 78/200 (39%), Gaps = 8/200 (4%) Query: 14 VSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDFFAAPCFIGEI 73 + R + ++G P ++ L G R+ A ++ ++ +APC+ GE+ Sbjct: 28 LLDAARQRRKTPGRRLFEKGDLPCGVYVLLEGSVRIGAAHEQRLLTNVEPASAPCWFGEV 87 Query: 74 ELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKNYRNIVSLTQN 133 L D V ++E+ L +P LL + + R LS K + S + Sbjct: 88 SLFDGLPRRFEVCSLEQSIFLHIPQPFLARLLDRHSEYWRWFAALLSQKVGLPLQSPEKM 147 Query: 134 QSFPLVNRLAAFILLSQEG--------DLYHEKHTQAAEYLGVSYRHLLYVLAQFIHDGL 185 + P R+A +L+ EG L QAAE L ++ LL VL + Sbjct: 148 RQLPPRARVAWRLLMLSEGYGPLSHARRLIALDDIQAAERLALASPALLEVLQDLHERRI 207 Query: 186 LIKSKKGYLIKNRKQLSGLA 205 + + + + +L +A Sbjct: 208 VRLGEGHLEVFDVDRLRRVA 227 >UniRef50_B8G2Z1 Transcriptional regulator, Crp/Fnr family n=3 Tax=Chloroflexus RepID=B8G2Z1_CHLAD Length = 222 Score = 119 bits (299), Expect = 7e-26, Method: Composition-based stats. Identities = 38/203 (18%), Positives = 68/203 (33%), Gaps = 8/203 (3%) Query: 12 TDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDFFAAPCFIG 71 D++A ++ + A + +F L +GR R+Y A GR + P G Sbjct: 20 ADLAALWQVATYPAGHIFHLPNEVGQHVFLLQQGRVRIYKLSAEGRALTLLVLNPPSLFG 79 Query: 72 EIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKNYRNIVSLT 131 E+ L+ +A+ +C + + +R L L + + L Sbjct: 80 EMTLVGSGTYDTCAEAMTDCVVAQIDRETFRDFLNRYPGAALNLMELMGSRLRTMEQRLA 139 Query: 132 QNQSFPLVNRLAAFILLSQEGD--------LYHEKHTQAAEYLGVSYRHLLYVLAQFIHD 183 + RLAA +L L H Q AE +G + L Sbjct: 140 DIAFKSVPQRLAALLLDLAGDSVEEAAPATLVRYTHQQLAEMIGAYRETVTKALGDMREA 199 Query: 184 GLLIKSKKGYLIKNRKQLSGLAL 206 L+ + ++ + +L LA Sbjct: 200 NLIRIDDETIILVDPDRLRRLAS 222 >UniRef50_Q46R24 Cyclic nucleotide-binding n=2 Tax=Cupriavidus RepID=Q46R24_RALEJ Length = 254 Score = 119 bits (298), Expect = 7e-26, Method: Composition-based stats. Identities = 35/210 (16%), Positives = 67/210 (31%), Gaps = 7/210 (3%) Query: 5 AFKDCFLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARL----YATLANGRVSL 60 L ++ +++ + G S L + G +L G Sbjct: 15 GVDARVLGAIANGATTQRLSKGEFLFRRGDACSGLIIVLDGLVKLALPATPCSVKGLERA 74 Query: 61 IDFFAAPCFIGEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLS 120 ++ F GE L +P QA+ L + L D L +L LS Sbjct: 75 VEVFGPGAVFGEDVLFADALQPADCQAMMRTTVLCIDSAALWDTLEQDPLLSARLLRNLS 134 Query: 121 HKNYRNIVSLTQNQSFPLVNRLAAFILLSQEGDL---YHEKHTQAAEYLGVSYRHLLYVL 177 + + + + + R+A F+ A LG++ L V+ Sbjct: 135 SRLHALMRDIEATSLQNALQRVAGFLRDEAHAGRCTWLACTQRVIASKLGITPETLSRVV 194 Query: 178 AQFIHDGLLIKSKKGYLIKNRKQLSGLALE 207 ++F + L+ + + + + L LA E Sbjct: 195 SRFSAENLVRLERGKIFVLDAEGLGRLAAE 224 >UniRef50_Q1J275 Transcriptional regulator, Crp/Fnr family n=3 Tax=Deinococcus RepID=Q1J275_DEIGD Length = 254 Score = 119 bits (298), Expect = 8e-26, Method: Composition-based stats. Identities = 32/218 (14%), Positives = 80/218 (36%), Gaps = 14/218 (6%) Query: 4 SAFKDCFLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDF 63 + + L V+A T + + I + L+++ G ++ NG+ +++ Sbjct: 41 ADLELAELEQVAAATPYRSYRPGEVIYRMDDPADALYFVRSGLVKISKLFPNGKEAILGV 100 Query: 64 FAAPCFIGEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKN 123 GE+ L ++ P +A+E + LP + LL KL ++ + Sbjct: 101 IGQHDTFGELLLQPEERRPTQAEALERTTLIVLPRAELQKLLDTKPALAMKLIRLMAARL 160 Query: 124 YRNIVSLTQNQSFPLVNRLAAFI--LLSQEGD--------LYHEKHTQAAEYLGVSYRHL 173 + ++ R+A+ + L + G A +G + + Sbjct: 161 FEAQSWTATVSAYSAPERVASLLYRLAREFGRPHAQGVELALKLNQEDIARMVGATRETV 220 Query: 174 LYVLAQFIHDGLLIKSKKGYLIKNRKQLSGLALEMDPE 211 + L++ +G + +++ ++ +L L ++ E Sbjct: 221 SHSLSKLKQEGAISRARTPMVV----RLDELKRYLEEE 254 >UniRef50_Q3K5V6 Cyclic AMP receptor protein,catabolite gene activator n=16 Tax=Gammaproteobacteria RepID=Q3K5V6_PSEPF Length = 214 Score = 119 bits (298), Expect = 8e-26, Method: Composition-based stats. Identities = 35/198 (17%), Positives = 66/198 (33%), Gaps = 13/198 (6%) Query: 11 LTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDFFAAPCFI 70 L + + A+ I+ G + L+++ RG + +GR +I + A F Sbjct: 13 LDKLLMHCQRRRHAAKSNIICAGDRSDTLYFIIRGSVTILIEDDDGREMIIAYLNAGDFF 72 Query: 71 GEIELI----DKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKNYRN 126 GE+ L + V+A EC + +R L D L L ++ + Sbjct: 73 GELGLFEEAGQEQQRSAWVRAKVECEVAEISYAKFRELSQQDPDILYVLSGQIAQRLRNT 132 Query: 127 IVSLTQNQSFPLVNRLAAFILL---------SQEGDLYHEKHTQAAEYLGVSYRHLLYVL 177 + F + R+A +L +G + +G S + VL Sbjct: 133 TRKVGDLAFFDVTGRVARCLLELCKQPDAMTHPDGMQIKVTRQEIGRIVGCSREMVGRVL 192 Query: 178 AQFIHDGLLIKSKKGYLI 195 L+ K ++ Sbjct: 193 KDLEERNLVDVKGKTMVV 210 >UniRef50_A9WEN3 Cyclic nucleotide-binding n=2 Tax=Chloroflexus RepID=A9WEN3_CHLAA Length = 239 Score = 119 bits (298), Expect = 8e-26, Method: Composition-based stats. Identities = 35/199 (17%), Positives = 63/199 (31%), Gaps = 12/199 (6%) Query: 20 LFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDFFAAPCFIGEIELIDKD 79 + A Q+ LF L GR R+Y +G++ GE+ L+ + Sbjct: 41 MQRVPAGTVFFSPEQRAEVLFILKEGRVRIYRLSTDGKMLTTAILNEGTIFGEMALLGQQ 100 Query: 80 HEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKNYRNIVSLTQNQSFPLV 139 +A+ C + + + LLL+D ++ L + L+ L Sbjct: 101 LHQHYAEALTPCLLCLMSREDVKRLLLSDPRIATRIVEILGQRLISAEQRLSDFAFKSLP 160 Query: 140 NRLAAFILLS------------QEGDLYHEKHTQAAEYLGVSYRHLLYVLAQFIHDGLLI 187 R+A +L H AE LG +L GL+ Sbjct: 161 QRIATLLLQMAQPAKPRLFRPGSSQREVALTHEALAEMLGTYRETTTKILNDLRTQGLIE 220 Query: 188 KSKKGYLIKNRKQLSGLAL 206 + ++ + L L+ Sbjct: 221 LRRGRIVLLDEIGLQKLSE 239 >UniRef50_A8MIN6 Transcriptional regulator, Crp/Fnr family n=3 Tax=Clostridiales RepID=A8MIN6_ALKOO Length = 229 Score = 119 bits (298), Expect = 8e-26, Method: Composition-based stats. Identities = 39/210 (18%), Positives = 77/210 (36%), Gaps = 10/210 (4%) Query: 6 FKDCFLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDFFA 65 D L +++ T + I EG + +++ G+ ++Y T +GR + + Sbjct: 19 LSDEDLEKINSITIEKNLRKGTIIFMEGDKGEAFYFIKSGKIKIYKTTPDGRELIFAILS 78 Query: 66 APCFIGEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKNYR 125 E+ L + P + +E+ + + L+ + + S K Y Sbjct: 79 HGDVFAEVALFNDVAYPAGAEVLEDACIGTIRNEDLEELIRKNAEIALHIIKEFSKKLYN 138 Query: 126 NIVSLTQNQSFPLVNRLAAFIL--------LSQEGDLYHE--KHTQAAEYLGVSYRHLLY 175 + + + R A IL + EG H + A +G + + Sbjct: 139 SQQKVKELALGDTYARTAQTILKLAKSNGKETSEGIEIHLDISRQELANLIGTARETVSR 198 Query: 176 VLAQFIHDGLLIKSKKGYLIKNRKQLSGLA 205 L+QF +G + KK +IK+ +LS A Sbjct: 199 ALSQFKKEGSIHIDKKKIIIKDLNKLSEWA 228 >UniRef50_C2E977 CRP/FNR family transcriptional regulator n=2 Tax=Firmicutes RepID=C2E977_9LACO Length = 207 Score = 119 bits (298), Expect = 9e-26, Method: Composition-based stats. Identities = 24/191 (12%), Positives = 77/191 (40%), Gaps = 2/191 (1%) Query: 16 ADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDFFAAPCFIGEIEL 75 + + F ++ E + + ++ + +GR ++Y ++G+ + I+ G+ Sbjct: 15 SIGKRIRFSPGKFVFCESDEANEIYLIVKGRVQVYLGTSSGKQTTIEVLKEGRIFGDASF 74 Query: 76 IDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKNYRNIVSLTQNQS 135 ++ + AI + + + P+L ++ + L+ ++ + + Sbjct: 75 LEHSVRKANIVAITDVELICCRITDLIPILQENSELALLMMRHLTSTCNYLTNTINRLVN 134 Query: 136 FPLVNRLAAFILLSQEGD--LYHEKHTQAAEYLGVSYRHLLYVLAQFIHDGLLIKSKKGY 193 + + ++A F+L + + H+ A L ++ + ++ +F +G + + Sbjct: 135 YDSIQKVADFLLTETNPNEPVIPYTHSDLAGCLNLNRVTVSRIMGKFKAEGAVEYGRGTI 194 Query: 194 LIKNRKQLSGL 204 + R++L L Sbjct: 195 RVLKRQKLEEL 205 >UniRef50_UPI0001BC2D33 transcriptional regulator, Crp/Fnr family protein n=1 Tax=Brevibacterium linens BL2 RepID=UPI0001BC2D33 Length = 203 Score = 119 bits (298), Expect = 9e-26, Method: Composition-based stats. Identities = 35/191 (18%), Positives = 67/191 (35%), Gaps = 8/191 (4%) Query: 24 LARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDFFAAPCFIGEIELIDKDHEPR 83 + + GQ S L + G+ ++ ANG+ ++ +GE + Sbjct: 11 EKGETVYSPGQPVSRLLVMHSGQLKVSRAAANGQDQILRTVTDGDVVGERAFLTGHRPVD 70 Query: 84 AVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKNYRNIVSLTQNQSFPLVNRLA 143 V A+E+ LL + +++ LS + L S + R+A Sbjct: 71 LVVALEDSRMCVFNHADLSALLRDYPDISQRMLRALSDRLSSVERLLAAITSSNVNARVA 130 Query: 144 AFILL---SQEGDLYHEKH----TQAAEYLGVSYRHLLYVLAQFIHDGLLIKSKKG-YLI 195 A++L S + + + A YLG + L LA G++ + I Sbjct: 131 AYLLDLPGSIRDGVATVQLPMAKQEVAAYLGTTPETLSRRLAALSASGIIELHGRRDITI 190 Query: 196 KNRKQLSGLAL 206 + L +A+ Sbjct: 191 RAIDALECIAI 201 >UniRef50_A0NV10 Cyclic nucleotide-binding:Bacterial regulatory protein, Crp n=3 Tax=Rhodobacteraceae RepID=A0NV10_9RHOB Length = 229 Score = 119 bits (298), Expect = 9e-26, Method: Composition-based stats. Identities = 30/210 (14%), Positives = 61/210 (29%), Gaps = 11/210 (5%) Query: 5 AFKDCFLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDFF 64 +S R A + + G + + + G ++ G L+ Sbjct: 16 GLDPELAVGLSRLARPMKISAGTILFENGDPGNGCYAVLEGSLKVSLLSVEGDEQLLAVL 75 Query: 65 AAPCFIGEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKNY 124 +GE+ L+D V A++E + ++ + R + + + Sbjct: 76 GPGDLVGELALLDGRPRSATVIALKEAQLAFIDKAAFQRFADENPAVYRHMLSIVGKRLR 135 Query: 125 RNIVSLTQNQSFPLVNRLAAFILLSQEG-----------DLYHEKHTQAAEYLGVSYRHL 173 L PL R+A +L E Y A G + ++ Sbjct: 136 HANDVLAARSFLPLPGRVAQTLLQLAETFGKPLDDGRLLIHYKLSQADIANMAGAARENV 195 Query: 174 LYVLAQFIHDGLLIKSKKGYLIKNRKQLSG 203 VL + G + + Y ++ L Sbjct: 196 SRVLNDWKRAGTISRISGYYCLEQMDFLEK 225 >UniRef50_C1PC82 Transcriptional regulator, Crp/Fnr family n=1 Tax=Bacillus coagulans 36D1 RepID=C1PC82_BACCO Length = 226 Score = 119 bits (298), Expect = 9e-26, Method: Composition-based stats. Identities = 34/210 (16%), Positives = 79/210 (37%), Gaps = 11/210 (5%) Query: 5 AFKDCFLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDFF 64 D L ++ + H +I +G ++++ G ++Y T ANG+ ++ Sbjct: 12 GLGDADLAVIADISVKKHAEKDAHIFFQGDPQEAVYFIESGEVKIYRTDANGKEQVVTLL 71 Query: 65 AAPCFIGEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKL-------CV 117 + K P A+ + +A+ + + +LLN+ L + Sbjct: 72 RDGDMFPHVGFFRKISYPANAMAVVDTNLVAIRITDFENVLLNNPQLTMTLYGVMSDEIL 131 Query: 118 TLSHKNYRNIVSLTQNQSFPLVNRLAAFILLSQEGDLYHEK----HTQAAEYLGVSYRHL 173 L + I++ Q L RL + ++ K ++ A +GV+ + Sbjct: 132 DLQDRLEAQILNNAYEQVVKLFLRLTRTHGVQEKDGFVLVKTPLNNSDLANMIGVTRETV 191 Query: 174 LYVLAQFIHDGLLIKSKKGYLIKNRKQLSG 203 + Q L++ +KG + ++++L+ Sbjct: 192 SRTIRQLKEKNLILPQEKGTYLIHQEKLTE 221 >UniRef50_B1I2T5 Putative transcriptional regulator, Crp/Fnr family n=1 Tax=Candidatus Desulforudis audaxviator MP104C RepID=B1I2T5_DESAP Length = 217 Score = 118 bits (297), Expect = 1e-25, Method: Composition-based stats. Identities = 29/192 (15%), Positives = 67/192 (34%), Gaps = 11/192 (5%) Query: 23 FLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDFFAAPCFIGEIELIDKDHEP 82 + I G+ P +++L G ++Y +G+ + IG E + Sbjct: 24 YPKGQRIFTSGEVPDRVYFLKAGVVKVYCLTGDGQRQTVALRYQGELIGIAEALYGGERT 83 Query: 83 RAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKNYRNIVSLTQNQSFPLVNRL 142 + + + + + + LL + F ++ L + ++ + + R+ Sbjct: 84 CCAEVVTDASMVVISKGRFIELLRSRPGFALRVAEILGARLREAHTMISDLTCYHVPGRV 143 Query: 143 AAFIL-LSQEGDL----------YHEKHTQAAEYLGVSYRHLLYVLAQFIHDGLLIKSKK 191 A F+L L + + H + A +G S ++ +L F G + + Sbjct: 144 ALFLLKLVERCGVTDREPGVRLSLRLTHEELAHMIGTSRSNVTSILNTFRKHGAIELKGR 203 Query: 192 GYLIKNRKQLSG 203 I N ++L Sbjct: 204 EIRILNPERLRD 215 >UniRef50_B3QXY7 Transcriptional regulator, Crp/Fnr family n=1 Tax=Chloroherpeton thalassium ATCC 35110 RepID=B3QXY7_CHLT3 Length = 229 Score = 118 bits (297), Expect = 1e-25, Method: Composition-based stats. Identities = 32/208 (15%), Positives = 72/208 (34%), Gaps = 10/208 (4%) Query: 6 FKDCFLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDFFA 65 D L + ++L + D ++ E + + L+ + G ++ T + + ++ A Sbjct: 19 LTDDELKSIIERSQLLSYKKDDVVLFESELGNALYIILDGFVKISRTNEDYKEVILAILA 78 Query: 66 APCFIGEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKNYR 125 F GE+ ++D AI + L + + + LL + L + + + Sbjct: 79 ERDFFGEMSVLDGAVRSADAIAISKVHALKIAAEDFLDLLEKNPKISLALLREMVSRLRK 138 Query: 126 NIVSLTQNQSFPLVNRLAAFILLSQEG----------DLYHEKHTQAAEYLGVSYRHLLY 175 + + ++A+ IL + A Y S + Sbjct: 139 TDHQIKSISLSDAIGKVASVILRLANDVGRQRRGRVEIDNFASQQEMANYAATSRETISR 198 Query: 176 VLAQFIHDGLLIKSKKGYLIKNRKQLSG 203 VL+ F DGL+ + +I + + Sbjct: 199 VLSMFERDGLIERDMNKIIITDFEAFKQ 226 >UniRef50_A8M7L2 Transcriptional regulator, Crp/Fnr family n=1 Tax=Salinispora arenicola CNS-205 RepID=A8M7L2_SALAI Length = 237 Score = 118 bits (297), Expect = 1e-25, Method: Composition-based stats. Identities = 33/206 (16%), Positives = 68/206 (33%), Gaps = 7/206 (3%) Query: 4 SAFKDCFLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDF 63 S + L V+ D R L + + + G+ S + + G+ +L G +++ Sbjct: 20 SELPESLLAAVAVDARERRLLRGEVLFRAGELCSAFYCVLSGQVKLTVAGGGGGEKVLEI 79 Query: 64 FAAPCFIGEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKN 123 A E + P A+ L + + L+ D F R + V +S + Sbjct: 80 VAPGETFAEALMFGHRPYPVTAVALSATRLLVVGSRTVHDLIAQDPDFARLMLVGMSVRL 139 Query: 124 YRNIVSLTQNQSFPLVNRLAAFILLSQEGDLYHEKHTQ-------AAEYLGVSYRHLLYV 176 +R + + R+A +L + + A L +S H Sbjct: 140 HRLVRQIASVSLSSAAERVADLLLSLAGPEAGESVVVELPAGKAVLASRLNLSPEHFSRT 199 Query: 177 LAQFIHDGLLIKSKKGYLIKNRKQLS 202 L GL+ + + + ++ Sbjct: 200 LRDLADTGLIRVEGRRVAVLDVARMR 225 >UniRef50_Q5P0W6 Transcriptional regulator, Dnr/Nnr type n=2 Tax=Rhodocyclaceae RepID=Q5P0W6_AZOSE Length = 229 Score = 118 bits (297), Expect = 1e-25, Method: Composition-based stats. Identities = 34/214 (15%), Positives = 72/214 (33%), Gaps = 12/214 (5%) Query: 1 MSESAFKDCFLTD----VSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANG 56 + + +F D V+ TR + + Q G F++ G+ +L + A G Sbjct: 12 LRQISFFSELSADDIDRVARYTRERTLEKGEVLFQRGDPVHGFFFVVSGQMKLAVSSAQG 71 Query: 57 RVSLIDFFAAPCFIGEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLC 116 +++ + GE + P + + L + L+ D+ F RKL Sbjct: 72 NEKVVEIISPMNSFGEAVMFLNRPYPVFAEGLVATRLLHIGQAVVSDLIDQDSSFARKLL 131 Query: 117 VTLSHKNYRNIVSLTQNQSFPLVNRLAAFILLSQEGD--------LYHEKHTQAAEYLGV 168 ++ + + I + R+ ++L E D A L + Sbjct: 132 AGMAIRLHSMIQDVEIYSLRSSTQRVIGYLLQQVEQDGATGARDIQLPTSKQVIASRLNL 191 Query: 169 SYRHLLYVLAQFIHDGLLIKSKKGYLIKNRKQLS 202 + L + ++ GL+ K + + L+ Sbjct: 192 TPETLSRIFHDLVNAGLITVHGKHIALHDPVGLA 225 >UniRef50_C6BVF1 Transcriptional regulator, Crp/Fnr family n=2 Tax=Desulfovibrio RepID=C6BVF1_DESAD Length = 226 Score = 118 bits (297), Expect = 1e-25, Method: Composition-based stats. Identities = 33/203 (16%), Positives = 74/203 (36%), Gaps = 2/203 (0%) Query: 4 SAFKDCFLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDF 63 + K L +S + + E + L L G+ +L+ G+ I Sbjct: 17 AQLKKEQLERLSQYAVINDIPRKSIFFSEDKASKGLHVLLTGKVKLFKISDEGKEQTIFV 76 Query: 64 FAAPCFIGEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKN 123 F + P + A+E+ L + Y L+ D L ++ +S + Sbjct: 77 FGPGEPFCLCSVFSDGVLPANMSALEDSRVLFINPTEYEKLVQEDPTILMQMMRVMSRRL 136 Query: 124 YRNIVSLTQNQSFPLVNRLAAFILLSQEGDLYH--EKHTQAAEYLGVSYRHLLYVLAQFI 181 + + + +RLAA+ L ++ + + + ++ +G++ L + + Sbjct: 137 KDAMEMIDSLSLKQVPSRLAAYFLSHEKNGQVNMDISYRELSKIIGITPEALSRTMKKMG 196 Query: 182 HDGLLIKSKKGYLIKNRKQLSGL 204 +GL+ I +R++LS Sbjct: 197 SNGLISVDGSEIEIIDREELSRC 219 >UniRef50_B3PG67 Cyclic AMP receptor protein n=2 Tax=Gammaproteobacteria RepID=B3PG67_CELJU Length = 232 Score = 118 bits (296), Expect = 1e-25, Method: Composition-based stats. Identities = 33/191 (17%), Positives = 73/191 (38%), Gaps = 4/191 (2%) Query: 10 FLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDFFAAPCF 69 +L ++ + L F +V EG + + L+ + +G + GR +++ + Sbjct: 35 YLAELEKSSVLRRFPKNTVLVTEGDESTHLYIIRKGIVSAFLNNDEGRQVNLNYMHEGEY 94 Query: 70 IGEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKNYRNIVS 129 GE+ LID +V I +C + + LL F L L+ + + Sbjct: 95 FGELSLIDSQPRSASVVTITDCEIILVSRASVHELLGKYPDFAMVLLKELTRRVRGLTDA 154 Query: 130 LTQNQSFPLVNRLAAFI--LLSQEGDLYHEK--HTQAAEYLGVSYRHLLYVLAQFIHDGL 185 + + R+++ + L +++ K H A +G S + ++ Q + Sbjct: 155 VKDLALLDVYGRVSSALEKLCDDNKRIHNPKVTHQDIANMVGSSREMVSRIMKQLLIGEY 214 Query: 186 LIKSKKGYLIK 196 +++ IK Sbjct: 215 IVQCSGYIEIK 225 >UniRef50_B8FPV6 Transcriptional regulator, Crp/Fnr family n=2 Tax=Desulfitobacterium hafniense RepID=B8FPV6_DESHD Length = 230 Score = 118 bits (296), Expect = 1e-25, Method: Composition-based stats. Identities = 35/200 (17%), Positives = 72/200 (36%), Gaps = 10/200 (5%) Query: 15 SADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDFFAAPCFIGEIE 74 +A F ++ I+ G Q +++YL +GR + A +G ++ + A GE Sbjct: 28 AAHGMFKRFKKKEIIIHSGDQIDYIYYLHKGRIKTVAQSPSGSQKILWYIEAGSIFGETP 87 Query: 75 LIDKDHEPRAVQAIEECWCLALPMKHY-RPLLLNDTLFLRKLCVTLSHKNYRNIVSLTQN 133 ++ A+ +C PM+ + ++ + TLS K + + Sbjct: 88 FFNRKPCDYNFFAVTDCEIYIYPMEVIMQEIIPKFPDLTLSIIKTLSRKVHILSTQVEDC 147 Query: 134 QSFPLVNRLAAFILLSQEGDLYHEKH---------TQAAEYLGVSYRHLLYVLAQFIHDG 184 + R+A I L +G + +K A LG+ + L Sbjct: 148 VFNKPLVRVAKLIYLLHQGRILEDKRGSSSIPLTQEDIANTLGMHRVTVNQALKHLKEIQ 207 Query: 185 LLIKSKKGYLIKNRKQLSGL 204 L + +I + ++L + Sbjct: 208 ALKEHTHLIIIHDPEKLKEV 227 >UniRef50_Q97TL8 CRP (Cyclic AMP receptor protein) regulatory protein n=1 Tax=Clostridium acetobutylicum RepID=Q97TL8_CLOAB Length = 188 Score = 118 bits (296), Expect = 1e-25, Method: Composition-based stats. Identities = 30/184 (16%), Positives = 58/184 (31%), Gaps = 2/184 (1%) Query: 22 HFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDFFAAPCFIGEIELIDKDHE 81 F I ++G+ +YL GR +++ +G ++ + GE D Sbjct: 1 MFKDNQIIYRQGEIAKNFYYLKEGRVQVFVNSTDGLEKILAIYKKGEIFGEASFFDGFPR 60 Query: 82 PRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKNYRNIVSLTQNQSFPLVNR 141 + + + + + + L LS K + P R Sbjct: 61 MSSAKTFSDSEIININKSDIMLYFQKEPLLALNFIELLSKKVRMLSNEIDSISFLPAEKR 120 Query: 142 LAAFIL--LSQEGDLYHEKHTQAAEYLGVSYRHLLYVLAQFIHDGLLIKSKKGYLIKNRK 199 +A ++L + H + +GVS + L +F + K LI N+ Sbjct: 121 IAQYLLNVSLSNNCSINCTHEDIGKAVGVSRVTVSRTLNKFSQYQWINTKYKKILILNKN 180 Query: 200 QLSG 203 L Sbjct: 181 ALLK 184 >UniRef50_A6NUW6 Putative uncharacterized protein n=1 Tax=Bacteroides capillosus ATCC 29799 RepID=A6NUW6_9BACE Length = 209 Score = 118 bits (296), Expect = 1e-25, Method: Composition-based stats. Identities = 29/186 (15%), Positives = 58/186 (31%), Gaps = 3/186 (1%) Query: 23 FLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDFFAAPCFIGEIELIDKDHEP 82 + I + Q +Y+ G + + + G + IGE D+ Sbjct: 21 YEPGRLIYLQDTQAEQFYYILSGTVKCFLSSGAGSERTLTLHHGGELIGEAAFFDRQPRV 80 Query: 83 RAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKNYRNIVSLTQNQSFPLVNRL 142 + A+ C +++ H + + L+ + R + R+ Sbjct: 81 SSAVAVTRCELVSVDRPHLSEVFSRHPDLAVSMLEYLA-RTVRLLSVHVDGTLLQADQRI 139 Query: 143 AAFI--LLSQEGDLYHEKHTQAAEYLGVSYRHLLYVLAQFIHDGLLIKSKKGYLIKNRKQ 200 A ++ L + H + +GVS + VL G + + I NR Sbjct: 140 ARYLLSLTPEADGTIRCTHEEIGAAVGVSRVTVSRVLGDLAKAGAVSTGYRTLKIANRAS 199 Query: 201 LSGLAL 206 L +A Sbjct: 200 LQHMAE 205 >UniRef50_C6A9A9 Transcriptional regulator n=20 Tax=Bifidobacteriaceae RepID=C6A9A9_BIFLB Length = 253 Score = 118 bits (296), Expect = 2e-25, Method: Composition-based stats. Identities = 33/202 (16%), Positives = 66/202 (32%), Gaps = 13/202 (6%) Query: 13 DVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDFFAAPCFIGE 72 ++ + +YI EG ++ + GR +L + RV L+ +GE Sbjct: 46 ELVPYLHHEEYDKGEYIFTEGDTDQRMYVIQEGRVKLTRQSVDKRVQLLSIHTRGELLGE 105 Query: 73 IELID--KDHEPRAVQAIEE-CWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKNYRNIVS 129 I + D A+ + + L L + L+++ N Sbjct: 106 IPVFDPQGGPRTANAVAMVDGTQVVWLDHDALFAWLSKYPGVAVDMLQVLANRMRANNER 165 Query: 130 LTQNQSFPLVNRLAAFILLSQ-------EGDL---YHEKHTQAAEYLGVSYRHLLYVLAQ 179 + + RLA +L E L + + A+ +G S + L Sbjct: 166 IADLVFSDVPGRLAKTLLSLASRFGKPVEEGLQVPHDLTQEEMAQLVGSSRETVNKALMD 225 Query: 180 FIHDGLLIKSKKGYLIKNRKQL 201 F + G + ++ + +I L Sbjct: 226 FANRGWIARNGRTIIIYQPGAL 247 >UniRef50_B6IT06 Transcriptional regulator, Crp n=1 Tax=Rhodospirillum centenum SW RepID=B6IT06_RHOCS Length = 232 Score = 118 bits (295), Expect = 2e-25, Method: Composition-based stats. Identities = 34/207 (16%), Positives = 74/207 (35%), Gaps = 9/207 (4%) Query: 14 VSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDFFAAPCFIGEI 73 +S HF A++ IV + + ++ GR R+ +GR D A ++GE+ Sbjct: 26 LSRQCSWRHFHAQEQIVDRSSESRDVCFIVEGRVRVVNYSLSGREITFDDIEAGGYLGEL 85 Query: 74 ELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKNYRNIVSLTQN 133 ID + ++ A+ E + + + + L+ + Sbjct: 86 SAIDGEPRSASIVALTETQVAFMSPRLFLETATQHPAVALLVMRRLARIVRSATGRIMDL 145 Query: 134 QSFPLVNRLAAFILLSQEGDLYHEK---------HTQAAEYLGVSYRHLLYVLAQFIHDG 184 + NR+ A +L + DL + H A + + + V + DG Sbjct: 146 STLGANNRVHAELLRLAKPDLRPDNTAEITPVPIHNDIASRVSTTRETVARVFSDLARDG 205 Query: 185 LLIKSKKGYLIKNRKQLSGLALEMDPE 211 +L + +I + ++L + + + Sbjct: 206 ILERRGNHLVILDFRKLENMVEGVRGD 232 >UniRef50_C4K986 Transcriptional regulator, Crp/Fnr family n=1 Tax=Thauera sp. MZ1T RepID=C4K986_THASP Length = 233 Score = 118 bits (295), Expect = 2e-25, Method: Composition-based stats. Identities = 37/200 (18%), Positives = 74/200 (37%), Gaps = 7/200 (3%) Query: 14 VSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDFFAAPCFIGEI 73 V A R H + + +VQ+ P ++ + GR + + +G ++ F GE Sbjct: 33 VLAAARPIHAVRGELLVQQEDCPRGIYLVLDGRVKCFVLSPSGGEKIVRLAEPGSFFGEE 92 Query: 74 ELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKNYRNIVSLTQN 133 + QAI L +P R +++ T F + L+ +Y + ++ Sbjct: 93 AALINRPHVANAQAIGTSELLLVPTAALRTAMVSSTAFSVSMSNRLAEASYDLMSTMQVQ 152 Query: 134 QSFPLVNRLAAFILLSQEGDL------YHEKHTQAAEYLGVSYRHLLYVLAQFIHDGLLI 187 R+A ++ D A L ++ L +L+Q DG++ Sbjct: 153 FQLSGTQRVAHYLTRLAPEDAERCEIRLDIDKQTIAAQLNLTPETLSRILSQLTRDGMIQ 212 Query: 188 -KSKKGYLIKNRKQLSGLAL 206 + ++G ++ QL A Sbjct: 213 PRGRRGMVLSKLSQLRDCAA 232 >UniRef50_Q1AXQ1 Transcriptional regulator, Crp/Fnr family n=1 Tax=Rubrobacter xylanophilus DSM 9941 RepID=Q1AXQ1_RUBXD Length = 234 Score = 118 bits (295), Expect = 2e-25, Method: Composition-based stats. Identities = 36/196 (18%), Positives = 72/196 (36%), Gaps = 10/196 (5%) Query: 21 FHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDFFAAPCFIGEIELIDKDH 80 F +D I G L++L G RLY + + + G++ L++ Sbjct: 33 RRFEPKDLIFAPGDPDDQLYFLLSGVVRLYKIYGDYKEATTALLKDRGIFGKLSLVEGRW 92 Query: 81 EPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKNYRNIVSLTQNQSFPLVN 140 + +A+ E A+ ++ F KL +LS + ++ + + Sbjct: 93 QDVFAEAVTEARVAAIQKAAIEQVIKTKPDFALKLFSSLSERLRQSDEVIESLLHREVST 152 Query: 141 RLAAFILL------SQEGD----LYHEKHTQAAEYLGVSYRHLLYVLAQFIHDGLLIKSK 190 RLA +L +EG H A + + + V+++F +GL+ Sbjct: 153 RLATLLLNLGERFGREEGGRLVIEVRMTHQDLANMIASTREAVSKVMSEFQREGLIETRN 212 Query: 191 KGYLIKNRKQLSGLAL 206 + + NR+ L+ A Sbjct: 213 RRIALLNREALAERAA 228 >UniRef50_Q1J0A2 Transcriptional regulator, Crp/Fnr family n=1 Tax=Deinococcus geothermalis DSM 11300 RepID=Q1J0A2_DEIGD Length = 231 Score = 118 bits (295), Expect = 2e-25, Method: Composition-based stats. Identities = 32/200 (16%), Positives = 67/200 (33%), Gaps = 6/200 (3%) Query: 13 DVSADTRLFHF---LARDYIVQEGQQPSWLFYLTRGRARLYATLANG-RVSLIDFFAAPC 68 D+ L F +++ + G LF ++ G R+Y G R + Sbjct: 28 DLRPLAALASFRLLKRGEHLFRRGDPLETLFLVSSGSVRVYRLARGGTRELTLHVEGPRQ 87 Query: 69 FIGEIELID-KDHEPRAVQAI-EECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKNYRN 126 + + + P + A+ L LP R + + + + + Sbjct: 88 LVAGVAAFQSRAVAPASAVALQTPTELLCLPAGAVRERVFGTPALAQAVIAYFARRQAEL 147 Query: 127 IVSLTQNQSFPLVNRLAAFILLSQEGDLYHEKHTQAAEYLGVSYRHLLYVLAQFIHDGLL 186 + + L RLAA++L +++ A LG + L +F L+ Sbjct: 148 LTRMEGLVFSELGERLAAYLLEHAREPHALPTNSELAALLGTVPELVSRKLGEFYRLNLI 207 Query: 187 IKSKKGYLIKNRKQLSGLAL 206 ++ + + +L+ LA Sbjct: 208 HLERRTVRVTDPAELARLAQ 227 >UniRef50_B2TMB7 Crp-family transcriptional regulator n=44 Tax=Firmicutes RepID=B2TMB7_CLOBB Length = 237 Score = 117 bits (294), Expect = 2e-25, Method: Composition-based stats. Identities = 32/210 (15%), Positives = 78/210 (37%), Gaps = 11/210 (5%) Query: 5 AFKDCFLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDFF 64 + L ++ + D I EG + L+++ +G+ +LY +G+ ++ Sbjct: 26 NLNNEELIEIVKTINHKEYNKGDIIFTEGSTANTLYFINKGKIKLYKYTKDGKEQILHIL 85 Query: 65 AAPCFIGEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKNY 124 + GE+ LI ++I L + +++ + K+ T+ + Sbjct: 86 SEGDLFGELNLIKPSEYGFNSKSIVNSKICTLTKDEMKDIIMRNPEIGIKVLETVGERLG 145 Query: 125 RNIVSLTQNQSFPLVNRLAAFIL-------LSQEGDL---YHEKHTQAAEYLGVSYRHLL 174 + + + + +R+A ++ + E ++ A Y+GV+ + Sbjct: 146 KVESLVQNLATNDVDSRMAYLLIDLMERYGETIENNISIKLSLSREDMANYIGVTRETIS 205 Query: 175 YVLAQFIHDGLLIKSK-KGYLIKNRKQLSG 203 L +F + L+ K +I + K L Sbjct: 206 RKLKKFEDEKLIKIVGTKNIIILDEKGLKD 235 >UniRef50_A5G0B9 Transcriptional regulator, Crp/Fnr family n=1 Tax=Acidiphilium cryptum JF-5 RepID=A5G0B9_ACICJ Length = 227 Score = 117 bits (294), Expect = 2e-25, Method: Composition-based stats. Identities = 33/211 (15%), Positives = 64/211 (30%), Gaps = 7/211 (3%) Query: 1 MSESAFKDCFLTDVSADTRLFHFL----ARDYIVQEGQQPSWLFYLTRGRARLYATLANG 56 M+ F + + + ++Q G + + + G R+ +G Sbjct: 9 MARIPLFAPFSPEELDALYACTYERNMTTGEMLIQRGDPGTSMMLILAGEVRVVLPGIDG 68 Query: 57 RVSLIDFFAAPCFIGEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLC 116 ++ GEI L D V A L L L+ D F ++ Sbjct: 69 NDQDLNTLREGAVFGEIALFDGKPRSADVVAATNGRLLVLERASVVRLIERDPQFAMRVI 128 Query: 117 VTLSHKNYRNIVSLTQNQSFPLVNRLAAFILLSQEGDL---YHEKHTQAAEYLGVSYRHL 173 + + + L + R+ F+L EG + +G + + Sbjct: 129 EIICMRLRTTLAQLDSILFQDVSQRVVTFLLQRSEGLERARIDTTQSALGRAVGSTRETV 188 Query: 174 LYVLAQFIHDGLLIKSKKGYLIKNRKQLSGL 204 L GL+ + +++R LS L Sbjct: 189 NRRLRDLEARGLIELTPGRITVRDRNGLSAL 219 >UniRef50_B1N0G1 cAMP-binding protein-catabolite gene activator or regulatory subunit of cAMP-dependent protein kinase n=2 Tax=Leuconostoc RepID=B1N0G1_LEUCK Length = 230 Score = 117 bits (294), Expect = 3e-25, Method: Composition-based stats. Identities = 34/206 (16%), Positives = 77/206 (37%), Gaps = 8/206 (3%) Query: 4 SAFKDCFLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDF 63 + D + ++ ++ + + + G + L+ + GR R+Y+ +GR I Sbjct: 20 NHLNDEQMHLIAQSANEVQYVKNELLFRFGDKDDTLYIINNGRVRIYSLSESGREQTIRI 79 Query: 64 FAAPCFIGEIELIDKDHEPRA-VQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHK 122 F+GE+ ++ + +AI E + K L +R++ ++ + Sbjct: 80 LHPGDFMGEVAVLQTEGYHSNYAEAISETSICRIHKKDLDQYLDLYPEIMRRILSDITKR 139 Query: 123 NYRNIVSLTQNQSFPLVNRLAAFILLSQEGDLYHE------KHTQAAEYLGVSYRHLLYV 176 + Q P+ R+ F+ + E + H A YLG + + Sbjct: 140 LQLSEKQTVQVSIEPVEARIIDFLSENVEDEKNHTYVTLPMSKKDLATYLGTTPETISRK 199 Query: 177 LAQFIHDGLLIK-SKKGYLIKNRKQL 201 + GL+ + ++K I + +L Sbjct: 200 FSSLEERGLIKRHTQKCVEIFDLDEL 225 >UniRef50_C0QS01 Transcriptional regulator, Crp/Fnr family n=1 Tax=Persephonella marina EX-H1 RepID=C0QS01_PERMH Length = 223 Score = 117 bits (294), Expect = 3e-25, Method: Composition-based stats. Identities = 39/202 (19%), Positives = 77/202 (38%), Gaps = 6/202 (2%) Query: 5 AFKDCFLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDFF 64 F F + +++ + IV +G++ S LF + GR + G +ID F Sbjct: 17 GFGGDFFRHIIPYMKIYQYQKGKEIVYQGEESSDLFIILEGRIKASIFDDEGNELVIDIF 76 Query: 65 AAPCFIGEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKNY 124 F+GE+ LID ++ A + L K++ +L KL L ++ Sbjct: 77 GEGDFVGELSLIDGKPRSASLIAETDVVVAVLERKYFIEILKKYPELCLKLAENLVYRLR 136 Query: 125 RNIVSLTQNQSFPLVNRLAAFILLSQEGD------LYHEKHTQAAEYLGVSYRHLLYVLA 178 + L + R+ + S + + H + A+ +G S + L Sbjct: 137 KADKFLESLAFLDVKERIINLFIESAVENDERVYKVPKMSHREIAKRIGASRESVTKALK 196 Query: 179 QFIHDGLLIKSKKGYLIKNRKQ 200 +F G+L + Y++ ++ Sbjct: 197 RFSELGILSEDNNMYILNLEEK 218 >UniRef50_A9B1R0 Transcriptional regulator, Crp/Fnr family n=1 Tax=Herpetosiphon aurantiacus ATCC 23779 RepID=A9B1R0_HERA2 Length = 222 Score = 117 bits (294), Expect = 3e-25, Method: Composition-based stats. Identities = 31/198 (15%), Positives = 67/198 (33%), Gaps = 5/198 (2%) Query: 14 VSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDFFAAPCFIGEI 73 +S+ I EG ++ + GR ++ GR ++ A + Sbjct: 24 LSSHANEQTVERGQIITLEGDPAVAMYLVYSGRIKVVRHSIEGREHILHVVEAYDHFNTV 83 Query: 74 ELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKNYRNIVSLTQN 133 + + P +A+ LA+P +H R + + +++ + + + Sbjct: 84 PMFREARCPATSEALVTSQLLAIPREHIRQVAQQHPELALAMLGEFANRLHNLVGLIENL 143 Query: 134 QSFPLVNRLAAFILL-----SQEGDLYHEKHTQAAEYLGVSYRHLLYVLAQFIHDGLLIK 188 + RLA +L Q +L + A ++G + L F GL+ Sbjct: 144 ALHTVNGRLARLLLQQAALAEQNPNLAPLTQAEMAAHIGSVREMVGRALKAFDAQGLIRL 203 Query: 189 SKKGYLIKNRKQLSGLAL 206 + I + + L+ A Sbjct: 204 ERGIIEIIDPQGLAAQAE 221 >UniRef50_Q6MNF7 Putative uncharacterized protein n=1 Tax=Bdellovibrio bacteriovorus RepID=Q6MNF7_BDEBA Length = 198 Score = 117 bits (294), Expect = 3e-25, Method: Composition-based stats. Identities = 39/199 (19%), Positives = 76/199 (38%), Gaps = 6/199 (3%) Query: 6 FKDCFLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDFFA 65 FKD F VS + F D + + G+ P ++++ G L +G+ L+ F Sbjct: 3 FKDLFSQAVSKN-----FRRGDVVYRAGETPQNIYFVESGLVGLGLWGESGKDHLVRLFR 57 Query: 66 APCFIGEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKNYR 125 G L + I++ + R + + KL TL+ + R Sbjct: 58 EGQIFGHRSLFANEPYHATATVIDDSVLRVMNKNEMRQQMKGNCDLAEKLLETLAIELRR 117 Query: 126 NIVSLTQNQSFPLVNRLAAFILLSQE-GDLYHEKHTQAAEYLGVSYRHLLYVLAQFIHDG 184 R+A ++ +E Y + A++ G + ++ LA+F+ DG Sbjct: 118 AEAKQLILSEKDAPARIAEAVVYLKELHPEYSWTRQEIADFCGTTTPTVIRTLARFVEDG 177 Query: 185 LLIKSKKGYLIKNRKQLSG 203 L+ + + +I ++K L Sbjct: 178 LIEQRGREIIILDKKNLLA 196 >UniRef50_Q2LV90 CAMP-dependent transcriptional regulator n=2 Tax=Syntrophus aciditrophicus SB RepID=Q2LV90_SYNAS Length = 249 Score = 117 bits (293), Expect = 3e-25, Method: Composition-based stats. Identities = 34/207 (16%), Positives = 69/207 (33%), Gaps = 10/207 (4%) Query: 6 FKDCFLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDFFA 65 F + L +++ + + + +G S F + G R+ + G Sbjct: 39 FNNSELRHLASLLKGQSLDKGEILFHKGDTGSAFFIIANGLIRISVSNKAGDEVTFAHLR 98 Query: 66 APCFIGEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKNYR 125 F GE+ L+D+ A+E+ L + P L + + + LS + R Sbjct: 99 GGDFFGEMALLDEQTRSADATALEDSTLYVLDRNDFFPFLFENENAVHSILRALSMRLRR 158 Query: 126 NIVSLTQNQSFPLVNRLAAFILLSQEGDLYH----------EKHTQAAEYLGVSYRHLLY 175 L + + +RLA +L E + GV+ + Sbjct: 159 TDDILAETAFLTVSSRLARRLLELAEPSQLSGRESAEYQVRMSQRELGAMPGVTRESINK 218 Query: 176 VLAQFIHDGLLIKSKKGYLIKNRKQLS 202 L G++ S+ I++ ++L Sbjct: 219 ELKILKDRGIITTSRGNIGIQDMERLK 245 >UniRef50_D1TDV0 Putative transcriptional regulator, Crp/Fnr family n=1 Tax=Burkholderia sp. CCGE1002 RepID=D1TDV0_9BURK Length = 297 Score = 117 bits (293), Expect = 3e-25, Method: Composition-based stats. Identities = 42/206 (20%), Positives = 74/206 (35%), Gaps = 8/206 (3%) Query: 13 DVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDFFAAPCFIGE 72 + + T++ H D+I +G S L +L G+ R+ +G L+ GE Sbjct: 93 NTTRLTKVVHIEEGDHICYQGAIESPLIFLVEGQLRVSTYSEDGVELLLYVVNPDECTGE 152 Query: 73 IELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKNYRNIVSLTQ 132 I +++ + A + L H R LL+D R L ++ + IV+ + Sbjct: 153 ISILNCAPTLGNIIATKRSTVGLLDRAHARR-LLSDPDVARSLNKLIAGRAKGLIVARSS 211 Query: 133 NQSFPLVNRLAAFILLSQEGD-------LYHEKHTQAAEYLGVSYRHLLYVLAQFIHDGL 185 R+ A I + + A GVS + V+ G+ Sbjct: 212 RSQPRADARVTAVIEAAINQSASFDSSLVELPNQVTIAAMAGVSRETVSRVITSLEKRGI 271 Query: 186 LIKSKKGYLIKNRKQLSGLALEMDPE 211 + + K I++R L LA P Sbjct: 272 VERESKAIRIRDRVALHHLATGRTPS 297 >UniRef50_C4L2Y7 Transcriptional regulator, Crp/Fnr family n=2 Tax=Exiguobacterium RepID=C4L2Y7_EXISA Length = 236 Score = 117 bits (293), Expect = 3e-25, Method: Composition-based stats. Identities = 32/212 (15%), Positives = 77/212 (36%), Gaps = 10/212 (4%) Query: 5 AFKDCFLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDFF 64 F D + L H + EG++ FYL G + G ++ + Sbjct: 14 VFSDETKQLLLEMMTLQHHPKASIVCWEGEKCDKFFYLKSGSVKFTKITKKGNPLVMFMY 73 Query: 65 AAPCFIGEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKNY 124 + F GE ++++ +++ EE + + L+ D F ++ S Sbjct: 74 GSDDFFGEFDIVETFPSSYSIETTEESTIGTISKRELESLMQRDIRFAGEILRWTSMMRK 133 Query: 125 RNIVSLTQNQSFPLVNRLAAFILLS-------QEGDLYHEKH---TQAAEYLGVSYRHLL 174 + + + + LA+ +L +E + +H + + +G + Sbjct: 134 HSEMKVRDLLLYGKPGALASTLLRMAAMHGVEEEDAIVIPRHPSDGELGQLIGAPRETVN 193 Query: 175 YVLAQFIHDGLLIKSKKGYLIKNRKQLSGLAL 206 +++Q+ +G++ + K +I++ L L Sbjct: 194 RLISQWRKEGVISTTTKSIIIRDVDFLKELCH 225 >UniRef50_B1MBG6 Putative transcriptional regulator n=1 Tax=Mycobacterium abscessus ATCC 19977 RepID=B1MBG6_MYCA9 Length = 232 Score = 117 bits (293), Expect = 3e-25, Method: Composition-based stats. Identities = 34/196 (17%), Positives = 68/196 (34%), Gaps = 10/196 (5%) Query: 16 ADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDFFAAPCFIGEIEL 75 A HF + I + G ++ +T+G+ L +G L GE+ + Sbjct: 24 ARLTTEHFQPDEVIFRPGDPGDRMYLVTQGKVALSRRSGDGAERLATLVGPTEMFGELSI 83 Query: 76 IDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKNYRNIVSLTQNQS 135 D + +A+ + R + + + +L L+ + + L Sbjct: 84 FDPEPRRSEARALTAVAARGMDRDTMRWWIAHHSDAAEQLLRVLARQVRKATRKLADIPH 143 Query: 136 FPLVNRLAAFIL-------LSQEGDLYHE---KHTQAAEYLGVSYRHLLYVLAQFIHDGL 185 + R+AA +L + +Y E + A+ +G S + VL +F GL Sbjct: 144 ADITARVAAQLLDLAQRFGTIEGDSVYVEHGLSQLELADLVGTSRESMCRVLHEFEKRGL 203 Query: 186 LIKSKKGYLIKNRKQL 201 + I + + L Sbjct: 204 IQVHGTSLTIYDCEVL 219 >UniRef50_C8SMN6 Transcriptional regulator, Crp/Fnr family n=1 Tax=Mesorhizobium opportunistum WSM2075 RepID=C8SMN6_9RHIZ Length = 316 Score = 117 bits (293), Expect = 3e-25, Method: Composition-based stats. Identities = 32/212 (15%), Positives = 71/212 (33%), Gaps = 10/212 (4%) Query: 4 SAFKDCFLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDF 63 S F F +L + A ++ + +F + G + +G+ + + Sbjct: 109 SQFDLLFS-----GCKLERYAAGQHLFLQEDAADRIFGVMSGTVEISIYSPDGQKLVANI 163 Query: 64 FAAPCFIGEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKN 123 + +GEI +D + C ++L H + + R + L + Sbjct: 164 ELSRSLVGEIGALDGRPRTATAICLTACELVSLSRTHLFDRIEKNPSLARAMIELLCARL 223 Query: 124 YRNIVSLTQNQSFPLVNRLAAFI-----LLSQEGDLYHEKHTQAAEYLGVSYRHLLYVLA 178 L F + RLA + +++ ++ E+LGV+ + L Sbjct: 224 RWVSGELGDQAFFGIEARLAKRLVFLEGVMADGAGWISISQSELGEFLGVTRESINKTLN 283 Query: 179 QFIHDGLLIKSKKGYLIKNRKQLSGLALEMDP 210 + + ++ + G I + L +A D Sbjct: 284 DWRNRRVIAIRRGGLRISDAGALRRIAESQDD 315 >UniRef50_C9LXS7 Cyclic nucleotide binding domain protein n=1 Tax=Selenomonas sputigena ATCC 35185 RepID=C9LXS7_9FIRM Length = 242 Score = 116 bits (292), Expect = 4e-25, Method: Composition-based stats. Identities = 46/220 (20%), Positives = 74/220 (33%), Gaps = 23/220 (10%) Query: 7 KDCFLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLI-DFFA 65 D S+ RL H+ + I EG P LF L G R+ +GR + + Sbjct: 21 DDVEALLASSQVRLVHYKKGEIIFHEGDVPERLFLLVSGAVRILKDTYSGRQIFLGEIRK 80 Query: 66 APCFIGEIELI-DKDHEPRAVQAIEECWCLALPMKHYRPLLLND---------------- 108 GE+ L ++ QA+ L + + D Sbjct: 81 PGVMFGEVYLFIERHAYDMFTQALAATELLEISSRMLTQGAAEDDFGEADDPERAQRVRL 140 Query: 109 -TLFLRKLCVTLSHKNYRNIVSLTQNQSFPLVNRLAAFILLSQEGDL----YHEKHTQAA 163 L R L + K Y+ L S L ++A +++L + E A Sbjct: 141 QGLLQRNLLRDFARKAYQMNNMLKVLASGSLRGKIARYLMLQPQQAEGKICLPESRESTA 200 Query: 164 EYLGVSYRHLLYVLAQFIHDGLLIKSKKGYLIKNRKQLSG 203 YL VS L L+ +G+L + I +R++L Sbjct: 201 IYLAVSRPALSRELSAMQKEGILAVESRTIHILDREKLEE 240 >UniRef50_C6PP44 Transcriptional regulator, Crp/Fnr family n=1 Tax=Clostridium carboxidivorans P7 RepID=C6PP44_9CLOT Length = 216 Score = 116 bits (292), Expect = 4e-25, Method: Composition-based stats. Identities = 30/195 (15%), Positives = 60/195 (30%), Gaps = 2/195 (1%) Query: 11 LTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDFFAAPCFI 70 L ++ F I Q+G+ +YL G +++ ++G ++ + Sbjct: 18 LFEIFKTKPARIFKNNQLIYQQGEIADNFYYLKEGIVQVFVNSSDGLEKILTIYKNGEIF 77 Query: 71 GEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKNYRNIVSL 130 GE D + + + + + + + LS K + Sbjct: 78 GEASFFDGFPRMSSAKTLSDSEIITINKTDIMSYFQKEPFLALNFIELLSQKVRMLSNEI 137 Query: 131 TQNQSFPLVNRLAAFILLSQEGDLYHEK--HTQAAEYLGVSYRHLLYVLAQFIHDGLLIK 188 R+A ++L Y H + +GVS + L +F + Sbjct: 138 DNISFLSAEKRIAQYLLRMNRYTSYPINCTHEDIGKSVGVSRITVSRTLNKFSKYKWVYT 197 Query: 189 SKKGYLIKNRKQLSG 203 K LI N+ L Sbjct: 198 KYKKILILNKNALLE 212 >UniRef50_Q1IUT3 Transcriptional regulator, Crp/Fnr family n=1 Tax=Candidatus Koribacter versatilis Ellin345 RepID=Q1IUT3_ACIBL Length = 234 Score = 116 bits (292), Expect = 4e-25, Method: Composition-based stats. Identities = 32/210 (15%), Positives = 79/210 (37%), Gaps = 10/210 (4%) Query: 4 SAFKDCFLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDF 63 S D ++S + + I EG + LF + G R++ + A+GR ++ Sbjct: 19 SGLSDVEWNELSQRVVPRKYPNGEMIFSEGDACAGLFVVQSGHIRIFKSSASGREQVLSI 78 Query: 64 FAAPCFIGEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKN 123 + E+ + D P + A+ +C L L + + L + K+ + + Sbjct: 79 DGPGSSVAELPVFDGGSYPASAVAVTDCTLLFLSKQDFHALCMKYPEMALKVLRVVGGRL 138 Query: 124 YRNIVSLTQNQSFPLVNRLAAFILLSQEGDLYHEKH----------TQAAEYLGVSYRHL 173 R + + + + +RL A +L + + + + A +G + Sbjct: 139 RRLVGIIEELSFTTVRHRLVALLLRLAKTEGNKTEQGITITLPAHNQELAAQIGTVRELV 198 Query: 174 LYVLAQFIHDGLLIKSKKGYLIKNRKQLSG 203 +++ +G++ + + ++K+ L Sbjct: 199 SRNMSRLQQEGMIEQDGRTVILKDPMGLQR 228 >UniRef50_A8EWN6 Putative transcriptional regulator, Crp/Fnr family n=1 Tax=Arcobacter butzleri RM4018 RepID=A8EWN6_ARCB4 Length = 217 Score = 116 bits (292), Expect = 4e-25, Method: Composition-based stats. Identities = 34/182 (18%), Positives = 69/182 (37%), Gaps = 1/182 (0%) Query: 22 HFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDFFAAPCFIGEIELIDKDHE 81 F + + +G +P +L L +G A+LY +I AP I EI ++ + Sbjct: 31 FFNKNEILFYKGDEPKYLHLLLKGIAKLYTYDYKDNEVIIHNLMAPNLIAEIANYEEMNF 90 Query: 82 PRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKNYRNIVSLTQNQSFPLVNR 141 L + K ++ L +L+ K + N S + + Sbjct: 91 LANCSFETNAEVLLIDYKKFKEEFLLKPEISMFFIKSLTKKIKALQSFINYNISLNSMEK 150 Query: 142 LAAFILLSQEGDLYHEKHTQAAEYLGVSYRHLLYVLAQFIHDGLLIKSKKGYLIKNRKQL 201 +A F+ ++ L + K + A+ L ++ L +A+ + ++ K I + K+L Sbjct: 151 IAKFLYDNESI-LMNLKQVKIAQILNITPETLSRKIAKLKRENIIQNEKGYIKILDYKRL 209 Query: 202 SG 203 Sbjct: 210 ET 211 >UniRef50_Q3ZWV2 Transcriptional regulator cNTP-binding, Crp n=2 Tax=Dehalococcoides RepID=Q3ZWV2_DEHSC Length = 247 Score = 116 bits (292), Expect = 5e-25, Method: Composition-based stats. Identities = 43/206 (20%), Positives = 80/206 (38%), Gaps = 10/206 (4%) Query: 12 TDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDFFAAPCFIG 71 T++S R +L +++ EG+ S +F +T+GR +L+ T NGR ++ + G Sbjct: 22 TEISHLFRRPEYLKNEHLFSEGEPASAVFVVTKGRIKLFKTSENGREIVLGYLTPNQLFG 81 Query: 72 EIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKNYRNIVSLT 131 E L + A A+E+ A + LL ++ K+ LS K +L Sbjct: 82 EEILFNDAIRTIAAVAVEDTKLCACYKNDFENLLSQNSQIAVKVIKALSDKINHITETLA 141 Query: 132 QNQSFPLVNRLAAFI--LLSQEGD--------LYHEKHTQAAEYLGVSYRHLLYVLAQFI 181 + RLA + L + G+ + H +G S + V+ Sbjct: 142 DMAIYDTQVRLARTLARLAKEHGEDVCDGRRLNFRLTHDDLGSLVGASRVMVTNVMKSLK 201 Query: 182 HDGLLIKSKKGYLIKNRKQLSGLALE 207 G++ L+ ++ L + E Sbjct: 202 KSGIIKDDIDHKLVVSQWFLKDYSDE 227 >UniRef50_D1C1E8 Transcriptional regulator, Crp/Fnr family n=1 Tax=Sphaerobacter thermophilus DSM 20745 RepID=D1C1E8_SPHTD Length = 248 Score = 116 bits (291), Expect = 5e-25, Method: Composition-based stats. Identities = 33/215 (15%), Positives = 78/215 (36%), Gaps = 10/215 (4%) Query: 6 FKDCFLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDFFA 65 L ++ R A +++ G + + L GR ++ +GR ++ Sbjct: 30 LPPEALAAIAYRLRPRPLEAGEFVFLAGTPAAHVSLLAEGRIKIIRETEDGREVILRVIQ 89 Query: 66 APCFIGEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKNYR 125 G + + P + A++ L +P+ + L+ + L+ + Sbjct: 90 PGEIFGGAGIWGEAVYPASAVALDAGVVLQMPVGDFSALIGEHPDVALAVIRELAQRLRE 149 Query: 126 NIVSLTQNQSFPLVNRLAAFIL--------LSQEGDLYHEKHT--QAAEYLGVSYRHLLY 175 +++ Q+ R+A +L +++G + T AE G + Sbjct: 150 AEARISELQTERAERRIARALLRLASKTGVQTEDGVEIGLRLTRQDLAELAGTTLGTASR 209 Query: 176 VLAQFIHDGLLIKSKKGYLIKNRKQLSGLALEMDP 210 L+ + GL+I ++ +I+ +L LA ++ Sbjct: 210 TLSAWDRAGLIIAGRERVVIREMHRLVALAEDLHE 244 Searching..................................................done Results from round 3 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_B8FJ06 Transcriptional regulator, Crp/Fnr family n=1 Ta... 221 1e-56 UniRef50_A0LNW4 Transcriptional regulator, Crp/Fnr family n=3 Ta... 219 7e-56 UniRef50_Q2LPZ1 Cyclic nucleotide-binding domain protein n=4 Tax... 218 9e-56 UniRef50_Q3M891 Transcriptional regulator, Crp/Fnr family n=2 Ta... 215 1e-54 UniRef50_B2A710 Transcriptional regulator, Crp/Fnr family n=1 Ta... 215 1e-54 UniRef50_C0GFA6 Transcriptional regulator, Crp/Fnr family n=1 Ta... 214 2e-54 UniRef50_C1TP24 cAMP-binding protein n=1 Tax=Dethiosulfovibrio p... 213 3e-54 UniRef50_B8FC47 Transcriptional regulator, Crp/Fnr family n=1 Ta... 213 4e-54 UniRef50_Q30Y06 Transcriptional regulator, Crp/Fnr family n=6 Ta... 211 1e-53 UniRef50_P74678 DNR protein n=1 Tax=Synechocystis sp. PCC 6803 R... 210 2e-53 UniRef50_C7LNX8 Transcriptional regulator, Crp/Fnr family n=1 Ta... 210 3e-53 UniRef50_B8HYC6 Transcriptional regulator, Crp/Fnr family n=2 Ta... 207 2e-52 UniRef50_B8CWR3 Putative transcriptional regulator, Crp/Fnr fami... 207 2e-52 UniRef50_C4XL82 Crp family transcriptional regulator n=2 Tax=Des... 207 2e-52 UniRef50_A8ZKF0 Cyclic nucleotide-binding domain n=2 Tax=Acaryoc... 206 3e-52 UniRef50_Q39ZI3 Transcriptional regulator, Crp/Fnr family n=9 Ta... 205 6e-52 UniRef50_Q3A4H0 Transcriptional regulator, Crp/Fnr family n=1 Ta... 205 8e-52 UniRef50_Q3AF29 Transcriptional regulator, Crp/Fnr family n=1 Ta... 204 2e-51 UniRef50_Q2SDD5 CAMP-binding protein-catabolite gene activator a... 203 2e-51 UniRef50_Q89HD2 Bll6060 protein n=3 Tax=Bradyrhizobium RepID=Q89... 203 3e-51 UniRef50_B2V833 Transcriptional regulator, Crp/Fnr family n=2 Ta... 202 7e-51 UniRef50_C6C034 Transcriptional regulator, Crp/Fnr family n=1 Ta... 202 1e-50 UniRef50_Q6AL49 Probable transcription regulator (Fnr-like) n=1 ... 201 1e-50 UniRef50_A4J2D4 Transcriptional regulator, Crp/Fnr family n=4 Ta... 200 3e-50 UniRef50_B5VZ90 Transcriptional regulator, Crp/Fnr family n=1 Ta... 198 8e-50 UniRef50_Q5NXU3 Catabolite gene activator (CAMP receptor protein... 198 1e-49 UniRef50_C8X3D0 Transcriptional regulator, Crp/Fnr family n=1 Ta... 198 1e-49 UniRef50_B0K8F6 Transcriptional regulator, Crp/Fnr family n=11 T... 198 2e-49 UniRef50_B8G111 Transcriptional regulator, Crp/Fnr family n=2 Ta... 197 2e-49 UniRef50_P0A9F0 Regulatory protein nsr n=59 Tax=Enterobacteriace... 197 2e-49 UniRef50_Q023C9 Transcriptional regulator, Crp/Fnr family n=2 Ta... 197 2e-49 UniRef50_A9WTJ5 Transcription regulator, crp family n=122 Tax=Ac... 197 3e-49 UniRef50_D1CAF8 Transcriptional regulator, Crp/Fnr family n=1 Ta... 197 3e-49 UniRef50_B8CZ46 Putative transcriptional regulator, Crp/Fnr fami... 196 4e-49 UniRef50_B8D2C4 Putative transcriptional regulator, Crp/Fnr fami... 196 4e-49 UniRef50_A8MIF1 Transcriptional regulator, Crp/Fnr family n=1 Ta... 196 5e-49 UniRef50_D2L3L7 Transcriptional regulator, Crp/Fnr family n=1 Ta... 196 6e-49 UniRef50_B8GAV8 Transcriptional regulator, Crp/Fnr family n=3 Ta... 195 7e-49 UniRef50_Q67K68 Putative cyclic nucleotide-binding transcription... 195 8e-49 UniRef50_C1A7L5 Crp family transcriptional regulator n=1 Tax=Gem... 194 1e-48 UniRef50_B9DSJ9 Crp family regulatory protein n=17 Tax=Firmicute... 194 1e-48 UniRef50_B5YAP2 Cyclic nucleotide-binding:Bacterial regulatory p... 194 2e-48 UniRef50_Q1AV16 Transcriptional regulator, Crp/Fnr family n=1 Ta... 194 2e-48 UniRef50_Q07J90 Transcriptional regulator, Crp/Fnr family n=11 T... 193 3e-48 UniRef50_C7PII7 Transcriptional regulator, Crp/Fnr family n=1 Ta... 193 5e-48 UniRef50_D1U5Y5 Transcriptional regulator, Crp/Fnr family n=1 Ta... 193 5e-48 UniRef50_Q2W4U7 cAMP-binding protein-catabolite gene activator a... 192 5e-48 UniRef50_C7RQ03 Transcriptional regulator, Crp/Fnr family n=1 Ta... 192 9e-48 UniRef50_Q13B58 Transcriptional regulator, Crp/Fnr family n=13 T... 192 1e-47 UniRef50_UPI0001C34903 Crp/FNR family transcriptional regulator ... 191 1e-47 UniRef50_Q1IUT3 Transcriptional regulator, Crp/Fnr family n=1 Ta... 191 2e-47 UniRef50_Q5P8X7 Transcriptional regulator, Dnr type n=9 Tax=Bact... 190 3e-47 UniRef50_B7GKB9 Transcriptional regulator, Crp family n=13 Tax=B... 190 3e-47 UniRef50_B0TI91 Transcriptional regulator, crp/fnr family, putat... 190 3e-47 UniRef50_A7NPI1 Transcriptional regulator, Crp/Fnr family n=1 Ta... 189 5e-47 UniRef50_A7VNU9 Putative uncharacterized protein n=1 Tax=Clostri... 189 6e-47 UniRef50_B3QJQ9 Transcriptional regulator, Crp/Fnr family n=2 Ta... 189 6e-47 UniRef50_B0ABB5 Putative uncharacterized protein n=1 Tax=Clostri... 188 8e-47 UniRef50_Q3JC77 Transcriptional regulatory protein, Crp family n... 188 1e-46 UniRef50_C4XN52 Crp family transcriptional regulator n=2 Tax=Des... 188 2e-46 UniRef50_A3I0Z6 Putative FNR-family transcriptional regulator pr... 187 2e-46 UniRef50_A1SH69 Cyclic nucleotide-binding n=1 Tax=Nocardioides s... 187 2e-46 UniRef50_C6P9N7 Transcriptional regulator, Crp/Fnr family n=1 Ta... 187 2e-46 UniRef50_Q07HN5 Transcriptional regulator, Crp/Fnr family n=1 Ta... 187 2e-46 UniRef50_C6XZK0 Response regulator receiver n=3 Tax=Bacteroidete... 187 3e-46 UniRef50_Q2SHS2 CAMP-binding protein-catabolite gene activator a... 186 4e-46 UniRef50_Q3SML3 Transcriptional Regulator, Crp/Fnr family n=1 Ta... 186 4e-46 UniRef50_A7NFZ8 Transcriptional regulator, Crp/Fnr family n=6 Ta... 186 5e-46 UniRef50_C6A9A9 Transcriptional regulator n=20 Tax=Bifidobacteri... 185 6e-46 UniRef50_C9RRN7 Transcriptional regulator, Crp/Fnr family n=1 Ta... 185 7e-46 UniRef50_C1XIJ9 cAMP-binding protein n=2 Tax=Meiothermus RepID=C... 184 1e-45 UniRef50_B5YHX8 Transcriptional regulator, putative n=1 Tax=Ther... 184 2e-45 UniRef50_B8ID71 Transcriptional regulator, Crp/Fnr family n=11 T... 184 2e-45 UniRef50_A8MIN6 Transcriptional regulator, Crp/Fnr family n=3 Ta... 184 2e-45 UniRef50_B2TMB7 Crp-family transcriptional regulator n=44 Tax=Fi... 184 2e-45 UniRef50_A0RLJ1 Cyclic nucleotide-binding domain protein n=37 Ta... 184 2e-45 UniRef50_O05689 Catabolite gene activator n=9 Tax=Gammaproteobac... 184 2e-45 UniRef50_Q814L9 Catabolite gene activator n=33 Tax=Bacillus RepI... 184 2e-45 UniRef50_B5EPN3 Transcriptional regulator, Crp/Fnr family n=6 Ta... 183 2e-45 UniRef50_C6IXS0 Transcription regulator n=1 Tax=Paenibacillus sp... 183 3e-45 UniRef50_Q5P0W6 Transcriptional regulator, Dnr/Nnr type n=2 Tax=... 183 3e-45 UniRef50_P0A2T7 Catabolite gene activator n=270 Tax=Gammaproteob... 183 4e-45 UniRef50_B7DNP2 Transcriptional regulator, Crp/Fnr family n=1 Ta... 183 4e-45 UniRef50_A1ZWX5 Transcriptional regulatory protein n=1 Tax=Micro... 183 4e-45 UniRef50_Q65IZ1 Putative uncharacterized protein n=1 Tax=Bacillu... 183 4e-45 UniRef50_C0WNJ4 CRP/FNR family transcriptional regulator n=3 Tax... 183 4e-45 UniRef50_Q0K2Z3 Transcriptional regulator, CRP-family n=3 Tax=Cu... 183 5e-45 UniRef50_C6WVL6 Transcriptional regulator, Crp/Fnr family n=1 Ta... 182 6e-45 UniRef50_A3DJ45 Transcriptional regulator, Crp/Fnr family n=3 Ta... 182 6e-45 UniRef50_C6PP44 Transcriptional regulator, Crp/Fnr family n=1 Ta... 182 8e-45 UniRef50_Q15QG5 Transcriptional regulator, Crp/Fnr family n=1 Ta... 182 8e-45 UniRef50_C7PGE5 Transcriptional regulator, Crp/Fnr family n=2 Ta... 182 8e-45 UniRef50_Q97TL8 CRP (Cyclic AMP receptor protein) regulatory pro... 182 9e-45 UniRef50_P29281 Catabolite gene activator n=65 Tax=Gammaproteoba... 182 9e-45 UniRef50_Q6MK24 Transcriptional regulatory protein n=1 Tax=Bdell... 182 1e-44 UniRef50_UPI0001C31809 transcriptional regulator, Crp/Fnr family... 181 1e-44 UniRef50_A4AEI3 Transcriptional regulator, Crp/Fnr family protei... 181 2e-44 UniRef50_A7GXI3 Transcription regulator n=5 Tax=Campylobacter Re... 181 2e-44 UniRef50_Q2G6R8 Transcriptional regulator, Crp/Fnr family n=3 Ta... 181 2e-44 UniRef50_A0NV10 Cyclic nucleotide-binding:Bacterial regulatory p... 180 2e-44 UniRef50_C9YCU2 Putative uncharacterized protein n=1 Tax=Curviba... 180 2e-44 UniRef50_C6HW21 Putative transcriptional regulator, Crp/Fnr fami... 180 2e-44 UniRef50_C6VTE5 Transcriptional regulator, Crp/Fnr family n=1 Ta... 180 3e-44 UniRef50_B1N0G1 cAMP-binding protein-catabolite gene activator o... 180 3e-44 UniRef50_A3EW66 Putative transcriptional regulator, Crp/Fnr fami... 180 4e-44 UniRef50_Q3SFR0 Transcriptional Regulator, Crp/Fnr family n=1 Ta... 180 4e-44 UniRef50_C6BVF1 Transcriptional regulator, Crp/Fnr family n=2 Ta... 180 4e-44 UniRef50_A9NE93 Transcriptional regulator, Crp/Fnr family n=1 Ta... 179 4e-44 UniRef50_Q2T0J6 Transcriptional regulator, putative n=61 Tax=Pro... 179 5e-44 UniRef50_C0QTS3 Transcriptional regulator, Crp/Fnr family n=1 Ta... 179 5e-44 UniRef50_D1A2I7 Transcriptional regulator, Crp/Fnr family n=1 Ta... 179 5e-44 UniRef50_C6LEY7 Regulatory protein nsr n=1 Tax=Bryantella format... 179 7e-44 UniRef50_B8G2Z1 Transcriptional regulator, Crp/Fnr family n=3 Ta... 178 8e-44 UniRef50_A2U1H8 Transcriptional regulator, CAP family n=1 Tax=Po... 178 8e-44 UniRef50_A9B1R0 Transcriptional regulator, Crp/Fnr family n=1 Ta... 178 1e-43 UniRef50_B1ZWR7 Transcriptional regulator, Crp/Fnr family n=1 Ta... 178 1e-43 UniRef50_Q2LV90 CAMP-dependent transcriptional regulator n=2 Tax... 178 1e-43 UniRef50_C1XRF8 cAMP-binding protein n=1 Tax=Meiothermus silvanu... 178 1e-43 UniRef50_A1SH88 Transcriptional regulator, Crp/Fnr family n=2 Ta... 178 1e-43 UniRef50_A9WEN3 Cyclic nucleotide-binding n=2 Tax=Chloroflexus R... 178 1e-43 UniRef50_A8M7L2 Transcriptional regulator, Crp/Fnr family n=1 Ta... 178 2e-43 UniRef50_D1C1E8 Transcriptional regulator, Crp/Fnr family n=1 Ta... 178 2e-43 UniRef50_Q0TRP4 Transcriptional regulator, Crp/Fnr family n=8 Ta... 177 2e-43 UniRef50_B6IXV7 Transcriptional regulator, Crp n=1 Tax=Rhodospir... 177 2e-43 UniRef50_A8U8V8 Transcription regulator n=1 Tax=Carnobacterium s... 177 2e-43 UniRef50_A0XZU1 Transcriptional regulator, Crp/Fnr family protei... 177 2e-43 UniRef50_D1ART3 Transcriptional regulator, Crp/Fnr family n=1 Ta... 177 3e-43 UniRef50_A6LU88 Cyclic nucleotide-binding protein n=3 Tax=Clostr... 177 3e-43 UniRef50_Q30QZ1 Putative transcriptional regulator, Crp/Fnr fami... 177 3e-43 UniRef50_C7VXD9 Transcription regulator n=2 Tax=Enterococcus Rep... 177 3e-43 UniRef50_B8IX54 Transcriptional regulator, Crp/Fnr family n=1 Ta... 177 3e-43 UniRef50_A6EDB2 Putative FNR-family transcriptional regulator pr... 177 3e-43 UniRef50_B3PG67 Cyclic AMP receptor protein n=2 Tax=Gammaproteob... 177 4e-43 UniRef50_Q2IVB4 Transcriptional regulator, Crp/Fnr family n=7 Ta... 177 4e-43 UniRef50_Q2P9V8 Denitrification regulator T n=1 Tax=Thermus ther... 177 4e-43 UniRef50_Q21SN7 Transcriptional regulator, Crp/Fnr family n=1 Ta... 176 4e-43 UniRef50_A5FBG9 Putative transcriptional regulator, Crp/Fnr fami... 176 4e-43 UniRef50_A0P0J2 Putative catabolite gene activator n=2 Tax=Labre... 176 5e-43 UniRef50_B8G033 Transcriptional regulator, Crp/Fnr family n=2 Ta... 176 5e-43 UniRef50_D0LG24 Transcriptional regulator, Crp/Fnr family n=1 Ta... 176 5e-43 UniRef50_Q1GF83 Transcriptional regulator, Crp/Fnr family n=14 T... 176 6e-43 UniRef50_A4X9W3 Transcriptional regulator, Crp/Fnr family n=5 Ta... 176 6e-43 UniRef50_Q03NI3 Crp-like transcriptional regulator n=1 Tax=Lacto... 175 6e-43 UniRef50_Q0TU94 Cyclic nucleotide-binding domain protein n=8 Tax... 175 6e-43 UniRef50_B1I2T5 Putative transcriptional regulator, Crp/Fnr fami... 175 8e-43 UniRef50_A9BMG5 Transcriptional regulator, Crp/Fnr family n=7 Ta... 175 8e-43 UniRef50_A4CGJ8 Transcriptional regulatory protein n=9 Tax=Flavo... 175 8e-43 UniRef50_Q7M956 PUTATIVE TRANSCRIPTIONAL REGULATOR n=1 Tax=Wolin... 175 8e-43 UniRef50_Q1J275 Transcriptional regulator, Crp/Fnr family n=3 Ta... 175 8e-43 UniRef50_A4BIJ9 Transcriptional regulator Dnr n=1 Tax=Reinekea b... 175 8e-43 UniRef50_Q03H18 Crp-like transcriptional regulator n=7 Tax=Lacto... 175 9e-43 UniRef50_B6R2R5 Cyclic nucleotide-binding protein n=1 Tax=Pseudo... 175 9e-43 UniRef50_B3QXY7 Transcriptional regulator, Crp/Fnr family n=1 Ta... 175 1e-42 UniRef50_D0LJM6 Transcriptional regulator, Crp/Fnr family n=1 Ta... 175 1e-42 UniRef50_C7PAL9 Transcriptional regulator, Crp/Fnr family n=2 Ta... 175 1e-42 UniRef50_A1ARS9 Transcriptional regulator, Crp/Fnr family n=3 Ta... 175 1e-42 UniRef50_C9R9Q5 Transcriptional regulator, Crp/Fnr family n=2 Ta... 175 1e-42 UniRef50_Q2J6W1 Transcriptional regulator, Crp/Fnr family n=4 Ta... 174 2e-42 UniRef50_A9NH90 Transcriptional regulator, Crp/Fnr family n=1 Ta... 174 2e-42 UniRef50_Q2W664 cAMP-binding protein-catabolite gene activator a... 174 2e-42 UniRef50_B1YHB5 Cyclic nucleotide-binding protein n=2 Tax=Exiguo... 174 2e-42 UniRef50_UPI0001B46169 Crp/FNR family transcriptional regulator ... 174 2e-42 UniRef50_A3IBY0 DNA-binding transcriptional activator of station... 174 2e-42 UniRef50_A6Q5Z4 Transcriptional regulator, Crp/Fnr family n=1 Ta... 174 2e-42 UniRef50_C8N8N0 Crp/Fnr family transcriptional regulator n=1 Tax... 173 3e-42 UniRef50_D2LTM0 Transcriptional regulator, Crp/Fnr family n=1 Ta... 173 3e-42 UniRef50_A8FDX9 Possible Crp family transcriptional regulator n=... 173 3e-42 UniRef50_D2QLW5 Transcriptional regulator, Crp/Fnr family n=1 Ta... 173 4e-42 UniRef50_B2UJ25 Transcriptional regulator, Crp/Fnr family n=10 T... 173 4e-42 UniRef50_C7NKH0 cAMP-binding protein n=1 Tax=Kytococcus sedentar... 173 4e-42 UniRef50_UPI00018512E8 cyclic nucleotide-binding protein n=1 Tax... 173 5e-42 UniRef50_B8FE86 Transcriptional regulator, Crp/Fnr family n=1 Ta... 173 5e-42 UniRef50_B2U6W1 Transcriptional regulator, Crp/Fnr family n=8 Ta... 173 5e-42 UniRef50_A6Q6Z4 Transcriptional regulator, Crp/Fnr family n=1 Ta... 172 5e-42 UniRef50_A0L4U2 Transcriptional regulator, Crp/Fnr family n=1 Ta... 172 6e-42 UniRef50_A5G0B9 Transcriptional regulator, Crp/Fnr family n=1 Ta... 172 6e-42 UniRef50_C6XD76 Transcriptional regulator, Crp/Fnr family n=1 Ta... 172 7e-42 UniRef50_C6J2H1 Cyclic nucleotide-binding protein n=2 Tax=Bacill... 172 9e-42 UniRef50_B4RIS9 Transcriptional regulator(CAMP-binding) n=1 Tax=... 172 1e-41 UniRef50_Q0FXM0 Putative catabolite gene activator n=1 Tax=Fulvi... 172 1e-41 UniRef50_Q0EX27 Cyclic nucleotide-binding:Bacterial regulatory p... 172 1e-41 UniRef50_A0NZG3 CAMP-binding protein-catabolite gene activator a... 172 1e-41 UniRef50_A3WI44 Transcriptional regulator, Crp/Fnr family protei... 171 1e-41 UniRef50_C6WZT9 Transcriptional regulator, Crp/Fnr family n=2 Ta... 171 1e-41 UniRef50_A1SH48 Cyclic nucleotide-binding n=1 Tax=Nocardioides s... 171 2e-41 UniRef50_B8G1C8 Transcriptional regulator, Crp/Fnr family n=3 Ta... 171 2e-41 UniRef50_Q1AXQ1 Transcriptional regulator, Crp/Fnr family n=1 Ta... 170 2e-41 UniRef50_Q03QC4 Crp-like transcriptional regulator n=1 Tax=Lacto... 170 2e-41 UniRef50_A0RGL8 Cyclic nucleotide-binding domain protein n=90 Ta... 170 2e-41 UniRef50_A8LVR8 Transcriptional regulator, Crp/Fnr family n=2 Ta... 170 3e-41 UniRef50_Q1PUQ2 Similar to transcriptional regulator of Crp/Fnr ... 170 3e-41 UniRef50_A8VXQ4 Putative transcriptional regulator, Crp/Fnr fami... 170 3e-41 UniRef50_A7G373 Transcriptional regulator, Crp/Fnr family n=14 T... 170 3e-41 UniRef50_Q2BCV7 Cyclic nucleotide-binding domain protein n=2 Tax... 170 3e-41 UniRef50_A4TDK3 Transcriptional regulator, Crp/Fnr family n=8 Ta... 170 3e-41 UniRef50_D2LDW4 Transcriptional regulator, Crp/Fnr family n=1 Ta... 170 3e-41 UniRef50_B8G0V1 Transcriptional regulator, Crp/Fnr family n=2 Ta... 170 3e-41 UniRef50_Q8KBR5 Transcriptional regulator, Crp/Fnr family n=1 Ta... 170 4e-41 UniRef50_C8VYA1 Transcriptional regulator, Crp/Fnr family n=1 Ta... 170 4e-41 UniRef50_A7BRS9 Transcriptional Regulator, Crp/Fnr family n=1 Ta... 170 4e-41 UniRef50_B8FQL0 Transcriptional regulator, Crp/Fnr family n=3 Ta... 170 4e-41 UniRef50_A6NUW6 Putative uncharacterized protein n=1 Tax=Bactero... 170 4e-41 UniRef50_C9Y9B1 Putative uncharacterized protein n=1 Tax=Curviba... 169 5e-41 UniRef50_B1ZX96 Transcriptional regulator, Crp/Fnr family n=2 Ta... 169 5e-41 UniRef50_C8SMN6 Transcriptional regulator, Crp/Fnr family n=1 Ta... 169 5e-41 UniRef50_C1PC82 Transcriptional regulator, Crp/Fnr family n=1 Ta... 169 6e-41 UniRef50_Q3ZWV2 Transcriptional regulator cNTP-binding, Crp n=2 ... 168 8e-41 UniRef50_Q5SID7 Transcription regulator, Crp family n=3 Tax=Ther... 168 8e-41 UniRef50_Q223N1 Transcriptional regulator, Crp/Fnr family n=2 Ta... 168 8e-41 UniRef50_B4RUQ2 Cyclic nucleotide-binding protein n=2 Tax=Altero... 168 8e-41 UniRef50_A4VHY5 DnrE protein n=5 Tax=Pseudomonas stutzeri RepID=... 168 9e-41 UniRef50_D0AGV6 Predicted protein n=2 Tax=Enterococcus RepID=D0A... 168 9e-41 UniRef50_Q46R24 Cyclic nucleotide-binding n=2 Tax=Cupriavidus Re... 168 9e-41 UniRef50_B1XXN2 Transcriptional regulator, Crp/Fnr family n=1 Ta... 168 1e-40 UniRef50_D1Y1F2 Putative transcriptional Regulator, Crp/Fnr fami... 168 1e-40 UniRef50_Q1ASB9 Transcriptional regulator, Crp/Fnr family n=1 Ta... 168 1e-40 UniRef50_A3JD75 Transcriptional regulator, Crp/Fnr family protei... 168 1e-40 UniRef50_B4RIF4 Transcriptonal regulator (About nitrogen fixatio... 168 2e-40 UniRef50_C8W2K0 Transcriptional regulator, Crp/Fnr family n=1 Ta... 168 2e-40 UniRef50_C6DKQ2 Transcriptional regulator, Crp/Fnr family n=5 Ta... 167 2e-40 UniRef50_Q3K5V6 Cyclic AMP receptor protein,catabolite gene acti... 167 2e-40 UniRef50_C5SD75 Transcriptional regulator, Crp/Fnr family n=1 Ta... 167 2e-40 UniRef50_C6D048 Transcriptional regulator, Crp/Fnr family n=1 Ta... 167 2e-40 UniRef50_Q47H89 Cyclic nucleotide-binding n=36 Tax=Betaproteobac... 167 2e-40 UniRef50_Q3JIA6 Transcriptional regulator, Crp/Fnr family n=100 ... 167 2e-40 UniRef50_C5R9W7 CRP/FNR family transcriptional regulator n=1 Tax... 167 2e-40 UniRef50_B6BLA3 Transcription regulator n=1 Tax=Campylobacterale... 167 2e-40 UniRef50_C9YFM8 Putative uncharacterized protein n=1 Tax=Curviba... 167 2e-40 UniRef50_Q72SA0 Transcriptional regulator (Crp family) n=2 Tax=L... 167 2e-40 UniRef50_Q11W09 Transcriptional regulator n=2 Tax=Bacteroidetes ... 167 3e-40 UniRef50_Q51661 Fnr-like transcriptional activator n=2 Tax=Parac... 167 3e-40 UniRef50_A1B7P5 Putative transcriptional regulator, Crp/Fnr fami... 167 3e-40 UniRef50_B7H3W0 Cyclic nucleotide-binding domain protein n=14 Ta... 167 3e-40 UniRef50_B7H5E4 Catabolite gene activator n=39 Tax=Bacillus cere... 167 4e-40 UniRef50_C2CK26 Transcriptional regulator n=1 Tax=Anaerococcus t... 166 4e-40 UniRef50_Q38UP6 Putative transcriptional regulator, Flp/Fnr fami... 166 4e-40 UniRef50_Q0VP50 Transcriptional regulator Anr n=3 Tax=Gammaprote... 166 4e-40 UniRef50_D1B0A9 Cyclic nucleotide-binding protein n=1 Tax=Sulfur... 166 5e-40 UniRef50_A8UU26 cAMP-dependent transcriptional regulator n=1 Tax... 166 5e-40 UniRef50_Q6MK23 Transcription regulator containing cAMP-binding ... 166 5e-40 UniRef50_C8W1Q7 Transcriptional regulator, Crp/Fnr family n=2 Ta... 166 5e-40 UniRef50_B9M2U2 Transcriptional regulator, Crp/Fnr family n=2 Ta... 166 5e-40 UniRef50_B5YI76 Catabolite gene activator n=1 Tax=Thermodesulfov... 166 6e-40 UniRef50_Q09BB2 Cyclic nucleotide-binding:Bacterial regulatory p... 166 6e-40 UniRef50_B7V4B3 Transcriptional regulator Dnr n=10 Tax=Proteobac... 166 6e-40 UniRef50_A8LM13 Transcriptional regulator n=5 Tax=Rhodobacterace... 166 6e-40 UniRef50_C1SKM4 cAMP-binding protein n=1 Tax=Denitrovibrio aceti... 166 6e-40 UniRef50_C5ELS6 Transcriptional regulator n=1 Tax=Clostridiales ... 165 7e-40 Sequences not found previously or not previously below threshold: UniRef50_B6IYE4 Nitrite and nitric oxide reductase regulator n=1... 177 4e-43 UniRef50_B2UG02 Transcriptional regulator, Crp/Fnr family n=2 Ta... 169 7e-41 >UniRef50_B8FJ06 Transcriptional regulator, Crp/Fnr family n=1 Tax=Desulfatibacillum alkenivorans AK-01 RepID=B8FJ06_DESAA Length = 237 Score = 221 bits (564), Expect = 1e-56, Method: Composition-based stats. Identities = 38/214 (17%), Positives = 69/214 (32%), Gaps = 6/214 (2%) Query: 4 SAFKDCFLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDF 63 + + L V F +I +G Q + G+ ++Y G+ + Sbjct: 21 AGLDEDQLKLVRNMAAEVSFKKGQFIFYDGDQADGFYAALDGQVKIYKISPEGKEQIFHV 80 Query: 64 FAAPCFIGEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKN 123 F GE+ + D P QA+ + CL K L+ + L+ + Sbjct: 81 FGPGEPFGEVPVFSGDSYPANAQALVKTKCLYFSRKGIVELINQSPAIAMNMLAVLARRL 140 Query: 124 YRNIVSLTQNQSFPLVNRLAAFILLSQEGD------LYHEKHTQAAEYLGVSYRHLLYVL 177 V + + R+A +IL + H A LG L L Sbjct: 141 REFTVQVENLSLKEVDGRVAGYILHMATEQNSPDLVVLHISKAHLASLLGTIPETLSRSL 200 Query: 178 AQFIHDGLLIKSKKGYLIKNRKQLSGLALEMDPE 211 + GL+ K+ I +R+ L + + + Sbjct: 201 GRLKDRGLIQVDKREIQIIDRQGLEDCSTGGNGD 234 >UniRef50_A0LNW4 Transcriptional regulator, Crp/Fnr family n=3 Tax=Deltaproteobacteria RepID=A0LNW4_SYNFM Length = 228 Score = 219 bits (558), Expect = 7e-56, Method: Composition-based stats. Identities = 40/209 (19%), Positives = 72/209 (34%), Gaps = 6/209 (2%) Query: 5 AFKDCFLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDFF 64 L+ V+ + F + EG + + + + GR ++Y G+ ++ F Sbjct: 15 GLPADQLSKVADVSIEQKFGKGQTLFSEGAKATGFYVIVSGRIKIYKLSLEGKEQILHIF 74 Query: 65 AAPCFIGEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKNY 124 A F E+ + P +AIE L P + L+ ++ + L + Sbjct: 75 GAGEFFAEVPVFAGGAFPAHAEAIEASRVLFFPRAAFIELVRSEPSLALNMLAILCQRLR 134 Query: 125 RNIVSLTQNQSFPLVNRLAAFILLS------QEGDLYHEKHTQAAEYLGVSYRHLLYVLA 178 R + + RLAA++L + Q A LG L +LA Sbjct: 135 RFTHMVEDLSLKEVPGRLAAYLLYLGERAEGSDRLELDTTKGQLASLLGTIPETLSRILA 194 Query: 179 QFIHDGLLIKSKKGYLIKNRKQLSGLALE 207 + + + I NR+ L LA Sbjct: 195 KMSQQEFITVEGRRITILNREALENLAAG 223 >UniRef50_Q2LPZ1 Cyclic nucleotide-binding domain protein n=4 Tax=Deltaproteobacteria RepID=Q2LPZ1_SYNAS Length = 229 Score = 218 bits (557), Expect = 9e-56, Method: Composition-based stats. Identities = 34/209 (16%), Positives = 75/209 (35%), Gaps = 6/209 (2%) Query: 4 SAFKDCFLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDF 63 + + L ++ R + I EG + + + G+ +++ G+ ++ Sbjct: 15 NGLSEQQLGEIRGIARDRFYDKGKEIFAEGDEGGGFYIVASGQVKVFKLSPEGKEHILHI 74 Query: 64 FAAPCFIGEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKN 123 + GE+ + + P + + + + L P + LL + L LS + Sbjct: 75 YGPGHSFGEVPVFSGERFPASAETLLKSHLLFFPRTDFVALLSGNPSLCMNLLADLSLRL 134 Query: 124 YRNIVSLTQNQSFPLVNRLAAFILLSQEGD------LYHEKHTQAAEYLGVSYRHLLYVL 177 + + + + RLA+++L + + + Q A LG L + Sbjct: 135 RQFTIQIENLTLKEVPGRLASYLLTLSDEEGQGNSLSLNISKGQLAGLLGTIPETLSRIF 194 Query: 178 AQFIHDGLLIKSKKGYLIKNRKQLSGLAL 206 + + GL+ K I +R L LA Sbjct: 195 LKMNNAGLIEVKGKEITILDRNGLQALAE 223 >UniRef50_Q3M891 Transcriptional regulator, Crp/Fnr family n=2 Tax=Cyanobacteria RepID=Q3M891_ANAVT Length = 231 Score = 215 bits (548), Expect = 1e-54, Method: Composition-based stats. Identities = 33/206 (16%), Positives = 70/206 (33%), Gaps = 6/206 (2%) Query: 5 AFKDCFLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDFF 64 D L ++ + + + I EG + + F + GR +++ G+ + F Sbjct: 22 DLLDEQLQALANIAIVQTYKKGEIIFWEGDEGTGFFIVKSGRVKIFKVANGGKEQIFHIF 81 Query: 65 AAPCFIGEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKNY 124 A + E+ D + P + A+E + +P + +L + TL+ Sbjct: 82 GAEEYFAEVPAFDGGNYPASAAALENSQVVFIPRSSFLTVLQQHPTLALAILGTLARHLR 141 Query: 125 RNIVSLTQNQSFPLVNRLAAFILLSQEG------DLYHEKHTQAAEYLGVSYRHLLYVLA 178 + + + RLA ++L + Q A LG L L Sbjct: 142 KLTHLVDTLSFQEVPQRLANYLLNLSKRLGNADVVELDLPKGQLAALLGTIPETLSRALY 201 Query: 179 QFIHDGLLIKSKKGYLIKNRKQLSGL 204 + + ++ + +R +L L Sbjct: 202 KLAQEKIIEMEGTTVRLCDRDRLINL 227 >UniRef50_B2A710 Transcriptional regulator, Crp/Fnr family n=1 Tax=Natranaerobius thermophilus JW/NM-WN-LF RepID=B2A710_NATTJ Length = 243 Score = 215 bits (548), Expect = 1e-54, Method: Composition-based stats. Identities = 30/211 (14%), Positives = 62/211 (29%), Gaps = 11/211 (5%) Query: 4 SAFKDCFLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDF 63 S + L +S L F I G ++Y+ G+ ++ +GR ++ Sbjct: 29 SHLTEDELNSISKLAYLREFPGGSVIFYHGDPGEAMYYVKDGKVKIVKDDFDGREQILHI 88 Query: 64 FAAPCFIGEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKN 123 E+ + D P + +E+ + + L K+ + + Sbjct: 89 MKPGDIFAEVVVFDDGPYPATAEVMEDTVVGVITKERLENHLHEHPTIAIKIMKLMGKRL 148 Query: 124 YRNIVSLTQNQSFPLVNRLAAFILLSQEGD-----------LYHEKHTQAAEYLGVSYRH 172 + + R I E D H + A G S Sbjct: 149 RKAQSKVADLALRDTYQRTINIIYNLMEEDDCAFCSEKQEIAITATHQELASMAGTSRET 208 Query: 173 LLYVLAQFIHDGLLIKSKKGYLIKNRKQLSG 203 + VL+ +G++ K + + +L Sbjct: 209 VTRVLSTLKKEGIIKTDKGYIAVTDPVKLKD 239 >UniRef50_C0GFA6 Transcriptional regulator, Crp/Fnr family n=1 Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GFA6_9FIRM Length = 229 Score = 214 bits (545), Expect = 2e-54, Method: Composition-based stats. Identities = 39/209 (18%), Positives = 80/209 (38%), Gaps = 10/209 (4%) Query: 5 AFKDCFLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDFF 64 + L V+A + + EG+Q LF + +GR ++ + A+GR ++ Sbjct: 19 GLSEEDLGMVAAVMIERSYAKGSVLFMEGEQGEALFVIRQGRVKISKSTADGREQILHML 78 Query: 65 AAPCFIGEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKNY 124 E+ L D+ P +A+E+ C L L+ + L KL +S + Sbjct: 79 KDGDIFAEVVLFDRGPYPATAEAVEDTQCWLLRSADMEKLMQSHPLLAIKLLRVMSKRLR 138 Query: 125 RNIVSLTQNQSFPLVNRLAAFILLSQEGD----------LYHEKHTQAAEYLGVSYRHLL 174 + + + R+A +L + + A +G S + Sbjct: 139 QAQLLVRDLALHDAYGRMAGLLLRFARREGKQTKDGIVLELDLTRQEMASMIGTSRETVA 198 Query: 175 YVLAQFIHDGLLIKSKKGYLIKNRKQLSG 203 +L++F DG+L K+ ++ + ++L Sbjct: 199 RILSRFQKDGVLTLDKQRIVLLDEEKLRE 227 >UniRef50_C1TP24 cAMP-binding protein n=1 Tax=Dethiosulfovibrio peptidovorans DSM 11002 RepID=C1TP24_9BACT Length = 234 Score = 213 bits (544), Expect = 3e-54, Method: Composition-based stats. Identities = 36/209 (17%), Positives = 74/209 (35%), Gaps = 6/209 (2%) Query: 4 SAFKDCFLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDF 63 + + + + L ++ I +G+ F + RGR R+Y GR ++ Sbjct: 14 NGLSRDETEKILSISILKKARKKEIIFSDGEVGEGFFAVLRGRVRVYKMSEEGREVILHV 73 Query: 64 FAAPCFIGEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKN 123 G++ + + P QA+ + L P + + LL + + LS K Sbjct: 74 CGPGDHFGQVSMFAGKNYPAWAQAMSDSKLLLFPRRAFLDLLSREPQIAMSMMSGLSSKM 133 Query: 124 YRNIVSLTQNQSFPLVNRLAAFILLSQEGD------LYHEKHTQAAEYLGVSYRHLLYVL 177 + + + RLA+++++ E Q A LG + L + Sbjct: 134 RELTLQVESLALKEVPGRLASYLIMLAEEKKSPGSLHLDIPKWQLASVLGTTPETLSRIF 193 Query: 178 AQFIHDGLLIKSKKGYLIKNRKQLSGLAL 206 + GL+ ++ + + L LA Sbjct: 194 SDMTDRGLIDLDRRDVTLLDHTALKELAE 222 >UniRef50_B8FC47 Transcriptional regulator, Crp/Fnr family n=1 Tax=Desulfatibacillum alkenivorans AK-01 RepID=B8FC47_DESAA Length = 227 Score = 213 bits (543), Expect = 4e-54, Method: Composition-based stats. Identities = 37/210 (17%), Positives = 76/210 (36%), Gaps = 6/210 (2%) Query: 5 AFKDCFLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDFF 64 L ++ + + I EG+ + + +GR ++ + G+ ++ Sbjct: 16 GLSKPDLDSLARIASMREYRKGAIIFFEGEYCDGFYVVAKGRVKITKISSKGKEQILYIL 75 Query: 65 AAPCFIGEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKNY 124 G++ + D P QA+E CL P + L+ + L+ ++ Sbjct: 76 ETGEPFGQLAIYHGDAFPATAQALETSVCLFFPKTPFLELISQRPALPMNMLAFLARRHR 135 Query: 125 RNIVSLTQNQSFPLVNRLAAFILLSQ------EGDLYHEKHTQAAEYLGVSYRHLLYVLA 178 + + + RLA ++L + Q A LG + L LA Sbjct: 136 ELTLQIENIALKEVPERLAEYLLYLCWEQKSLKTVSLPISKEQLAYLLGATPETLSRSLA 195 Query: 179 QFIHDGLLIKSKKGYLIKNRKQLSGLALEM 208 + + DG+++ K I + + L+ LA M Sbjct: 196 KLVDDGMIMMDGKDISIIDEESLNDLARSM 225 >UniRef50_Q30Y06 Transcriptional regulator, Crp/Fnr family n=6 Tax=Desulfovibrionales RepID=Q30Y06_DESDG Length = 248 Score = 211 bits (539), Expect = 1e-53, Method: Composition-based stats. Identities = 43/210 (20%), Positives = 77/210 (36%), Gaps = 6/210 (2%) Query: 4 SAFKDCFLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDF 63 S L +++ I EG + L+ + GR +++ T +GR +++ Sbjct: 35 SGLSAQQLESMASIAVDRPVDKGQIIFVEGTRAEGLYIVLDGRVKIFKTAPDGREAVMHV 94 Query: 64 FAAPCFIGEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKN 123 F A GE+ + D P A+E+ L LP + + D + LS K Sbjct: 95 FGAGEPFGEVAVFQNDVFPANAMAVEQSRVLFLPRRGIVDRIAQDPSLAMNMLAALSRKL 154 Query: 124 YRNIVSLTQNQSFPLVNRLAAFILLSQ------EGDLYHEKHTQAAEYLGVSYRHLLYVL 177 + + RLAA++L + + A LG + L L Sbjct: 155 RMFTRQVEALTLKEIPQRLAAYLLHLSVKKGHKDVIRLDVSKSLLAGVLGTARETLSRAL 214 Query: 178 AQFIHDGLLIKSKKGYLIKNRKQLSGLALE 207 A+ + G + + I +R+ L+ LA Sbjct: 215 AKLVETGAITMEGRTITITDREYLTALAEG 244 >UniRef50_P74678 DNR protein n=1 Tax=Synechocystis sp. PCC 6803 RepID=P74678_SYNY3 Length = 238 Score = 210 bits (537), Expect = 2e-53, Method: Composition-based stats. Identities = 37/225 (16%), Positives = 75/225 (33%), Gaps = 17/225 (7%) Query: 4 SAFKDCFLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDF 63 L ++A ++ + D + +EG +P F + GR ++Y G+ ++ Sbjct: 18 QNIDSHHLEMITAIAQVKSYGKGDVVFKEGDKPKGFFIVRSGRVKIYKIAPGGKEQILRI 77 Query: 64 FAAPCFIGEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKN 123 F EI + D P + +++ + P + +L + +LS Sbjct: 78 FHRGEHFAEIAVFDNLPFPASAATLDQAEMIFFPRSPFLEMLAQHPTLALNMLSSLSRHL 137 Query: 124 YRNIVSLTQNQSFPLVNRLAAFILLSQEGD-----------LYHEKHTQAAEYLGVSYRH 172 + + + RLA+++L D +Q A LG Sbjct: 138 RHLTAVIEELSFKDVPQRLASYLLRLGGVDTGTVEVLSLWVTLDLPKSQLAAQLGTIPAT 197 Query: 173 LLYVLAQFIHDGLLIKSKKGYLIKNRKQLSGLALEMDPENKFSGM 217 L Q ++ L+ + + +L LA + GM Sbjct: 198 LSRAFYQLKNEDLIAVKGAEIQLLDCDRLRALA------KRGDGM 236 >UniRef50_C7LNX8 Transcriptional regulator, Crp/Fnr family n=1 Tax=Desulfomicrobium baculatum DSM 4028 RepID=C7LNX8_DESBD Length = 227 Score = 210 bits (535), Expect = 3e-53, Method: Composition-based stats. Identities = 37/209 (17%), Positives = 70/209 (33%), Gaps = 6/209 (2%) Query: 5 AFKDCFLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDFF 64 + L + + F D + EG++ + + G+ +++ +GR ++ Sbjct: 15 GLPEDELRQLERISEPREFDKGDILFLEGREGVGFYVVAAGQVKVFKMSFDGREQILHIL 74 Query: 65 AAPCFIGEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKNY 124 +GE+ + P QA+ + P + L + LS + Sbjct: 75 GPGDPLGEVPVFAGQTYPANAQALVKSSLYFFPRQKLIELYRESPSLAMNMLAVLSRRLR 134 Query: 125 RNIVSLTQNQSFPLVNRLAAFILLSQE------GDLYHEKHTQAAEYLGVSYRHLLYVLA 178 V + + RLA ++L Q + LG S L VL Sbjct: 135 EFTVLIENLSLKEIPQRLATYLLHQQSLKPVSARVKLSVTKGVLSNILGTSQETLSRVLG 194 Query: 179 QFIHDGLLIKSKKGYLIKNRKQLSGLALE 207 + +GL+ K I N ++L LA Sbjct: 195 KLSQEGLIDVQGKEISILNAERLQELAGG 223 >UniRef50_B8HYC6 Transcriptional regulator, Crp/Fnr family n=2 Tax=Cyanobacteria RepID=B8HYC6_CYAP4 Length = 236 Score = 207 bits (529), Expect = 2e-52, Method: Composition-based stats. Identities = 38/212 (17%), Positives = 74/212 (34%), Gaps = 6/212 (2%) Query: 4 SAFKDCFLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDF 63 L +++ + + + I +G + + F + GR +++ A GR ++ F Sbjct: 22 QGLPFEQLVELAKLAIVQCYDRGEIIFHQGDEGTGFFLVRSGRVKIFKLSAEGREQILHF 81 Query: 64 FAAPCFIGEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKN 123 + E+ +D P + A+E+ L P + + LL L + + Sbjct: 82 LGEKDYFAEVPALDGQCFPASAAALEQSELLFFPRQAFLQLLEQQPTLTINLLKSFARHL 141 Query: 124 YRNIVSLTQNQSFPLVNRLAAFILLSQEG------DLYHEKHTQAAEYLGVSYRHLLYVL 177 + + RLA ++L E Q A LG L V Sbjct: 142 RHFSHLIDSLVLHEVPARLAIYLLSLSEKTGQAETVELDLPKGQLAARLGTVPETLSRVF 201 Query: 178 AQFIHDGLLIKSKKGYLIKNRKQLSGLALEMD 209 A+ GL+ + +RK+L+ + E Sbjct: 202 AKLGRAGLIEIDGSRVKLLDRKRLNQIVTEER 233 >UniRef50_B8CWR3 Putative transcriptional regulator, Crp/Fnr family n=1 Tax=Halothermothrix orenii H 168 RepID=B8CWR3_HALOH Length = 226 Score = 207 bits (529), Expect = 2e-52, Method: Composition-based stats. Identities = 41/208 (19%), Positives = 78/208 (37%), Gaps = 8/208 (3%) Query: 4 SAFKDCFLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDF 63 S D L+ V++ + F I EG++ +++L +GR ++ T +G +++ Sbjct: 17 SEMSDEDLSTVASLLQTRIFKDGTNIFFEGEEGDRVYFLKKGRVKVKKTSPDGGEQILEI 76 Query: 64 FAAPCFIGEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKN 123 GE+ L D P AI E L +R N+ + ++ K Sbjct: 77 ITPGDVFGEVVLFGIDRYPATTVAIGEVVVDYLSRSKFRRYFTNNPEIGWGMLKVMARKL 136 Query: 124 YRNIVSLTQNQSFPLVNRLAAFILLSQEG--------DLYHEKHTQAAEYLGVSYRHLLY 175 R+ + R+A I+ H + A ++G S + Sbjct: 137 ARSQKRIENLGLRDTKGRVATLIMDMMRDFGEKNNQVVKLHFNRQELANFIGTSRETVSR 196 Query: 176 VLAQFIHDGLLIKSKKGYLIKNRKQLSG 203 L++F +GL+ K +IK+ + L Sbjct: 197 TLSEFKSEGLIDIKGKKLIIKDIEGLKR 224 >UniRef50_C4XL82 Crp family transcriptional regulator n=2 Tax=Desulfovibrio RepID=C4XL82_DESMR Length = 242 Score = 207 bits (529), Expect = 2e-52, Method: Composition-based stats. Identities = 48/207 (23%), Positives = 77/207 (37%), Gaps = 5/207 (2%) Query: 4 SAFKDCFLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDF 63 S L ++A + + I G F + G+ R+Y T G+ +I Sbjct: 14 SGLGPKELAALAAVAEVRRYGRGQDIFFSGDPAEGFFSVASGKVRIYQTSLAGKEHIIHV 73 Query: 64 FAAPCFIGEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKN 123 F E+ + P QA+EE L P + +R LL +D + LS + Sbjct: 74 FGPGEVFAEVAVFAGGVYPANAQAMEEGDYLFFPRERFRKLLADDPDLALTMLGLLSIRL 133 Query: 124 YRNIVSLTQNQSFPLVNRLAAFILLSQEGDL-----YHEKHTQAAEYLGVSYRHLLYVLA 178 + + L + RLA+ +LL Q A YLG L VL Sbjct: 134 RQLVRKLEDLSLREVPARLASHLLLLGAQSKKRVLPLDLPKGQLAAYLGTIPETLSRVLR 193 Query: 179 QFIHDGLLIKSKKGYLIKNRKQLSGLA 205 +F+ +GL+ + I + +L LA Sbjct: 194 RFVDEGLISLTGSAVEILDAARLEALA 220 >UniRef50_A8ZKF0 Cyclic nucleotide-binding domain n=2 Tax=Acaryochloris marina MBIC11017 RepID=A8ZKF0_ACAM1 Length = 230 Score = 206 bits (526), Expect = 3e-52, Method: Composition-based stats. Identities = 34/212 (16%), Positives = 75/212 (35%), Gaps = 4/212 (1%) Query: 5 AFKDCFLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDFF 64 ++ ++ F + I Q+ + +++ GR +++ A G+ +++ F Sbjct: 19 GLSAEQRQALTQTAQIQPFKKGEQIFHPDQEATGFYFVKSGRVKVFQMSAKGKEQILNIF 78 Query: 65 AAPCFIGEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKNY 124 ++ +D P + A+E + P + L ++ ++ V+L Sbjct: 79 TEGDNFADVPALDGQSFPASAAALEPADLIFFPRYPFLDFLHHNPDVAVQMLVSLFSHLR 138 Query: 125 RNIVSLTQNQSFPLVNRLAAFILLS----QEGDLYHEKHTQAAEYLGVSYRHLLYVLAQF 180 + Q + RLA ++L + Q A LG L Q Sbjct: 139 HLAQLVEQLSFKSVPQRLATYLLSLGDTVSDTVYLDLTKGQLAARLGTIPATLSRAFYQL 198 Query: 181 IHDGLLIKSKKGYLIKNRKQLSGLALEMDPEN 212 DG++ S I +R +L+ L + + Sbjct: 199 SSDGMIAISGSKVTILDRDRLTVLIQSPETPD 230 >UniRef50_Q39ZI3 Transcriptional regulator, Crp/Fnr family n=9 Tax=Desulfuromonadales RepID=Q39ZI3_GEOMG Length = 230 Score = 205 bits (524), Expect = 6e-52, Method: Composition-based stats. Identities = 41/212 (19%), Positives = 74/212 (34%), Gaps = 10/212 (4%) Query: 4 SAFKDCFLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDF 63 S L+DV+A F + + EG+ S + L +G +L +G+ ++ F Sbjct: 14 SGLDGENLSDVAAIATRRPFARGESLFSEGEPASGFYLLAQGSMKLCKVSPDGKEKVLHF 73 Query: 64 FAAPCFIGEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKN 123 E P +A E+ + P + + +L + F L V+LS Sbjct: 74 VHPGETFAEAAFFGDGKYPAEARATEKGEAIFFPREGFMGILERNPRFSLNLIVSLSLML 133 Query: 124 YRNIVSLTQNQSFPLVNRLAAFILLSQEGD----------LYHEKHTQAAEYLGVSYRHL 173 R + + + RLAA ++ E K + A LG L Sbjct: 134 RRFARQIEELTFAEVPARLAAHLVELAERKSTAFQGKTYLDLDMKKGELASRLGTVSETL 193 Query: 174 LYVLAQFIHDGLLIKSKKGYLIKNRKQLSGLA 205 + +GL+ +I + ++L A Sbjct: 194 SRAFRKLKEEGLIEVEGSRVVIFDMEKLKDAA 225 >UniRef50_Q3A4H0 Transcriptional regulator, Crp/Fnr family n=1 Tax=Pelobacter carbinolicus DSM 2380 RepID=Q3A4H0_PELCD Length = 224 Score = 205 bits (523), Expect = 8e-52, Method: Composition-based stats. Identities = 39/211 (18%), Positives = 72/211 (34%), Gaps = 4/211 (1%) Query: 4 SAFKDCFLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDF 63 + D L D++ R ++ + EG + F G+ +++ +GR ++ Sbjct: 14 AGVTDKDLDDLTGIARRQKYVKGQMVFSEGDDATGFFIPIEGKVKIFKLSPDGRERILRI 73 Query: 64 FAAPCFIGEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKN 123 E + D P QAIE+ L P + LL + + +S Sbjct: 74 AHPGRTFAEAAIFDVGVFPAYAQAIEDSVLLFFPKQAILNLLHCNAQLAINMIGGISRIL 133 Query: 124 YRNIVSLTQNQSFPLVNRLAAFILLSQE----GDLYHEKHTQAAEYLGVSYRHLLYVLAQ 179 + + + +RLA ++L E TQ A L + L L + Sbjct: 134 RELMDHMESLTFKDVPSRLARYLLDLSEMKQREVRLPVSKTQLAANLNTAGETLSRSLRK 193 Query: 180 FIHDGLLIKSKKGYLIKNRKQLSGLALEMDP 210 + L+ + I N + L LA + Sbjct: 194 MSDENLIAVRGRNIEILNFQGLLDLAAKYKE 224 >UniRef50_Q3AF29 Transcriptional regulator, Crp/Fnr family n=1 Tax=Carboxydothermus hydrogenoformans Z-2901 RepID=Q3AF29_CARHZ Length = 213 Score = 204 bits (521), Expect = 2e-51, Method: Composition-based stats. Identities = 35/200 (17%), Positives = 68/200 (34%), Gaps = 2/200 (1%) Query: 6 FKDCFLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDFFA 65 L ++ + EG + +++L GR +LY GR ++ + Sbjct: 16 LSPDDLKEIGNLLYSRRLKKGQILFSEGDPGAAVYFLKSGRIKLYKEDREGREHILHYVE 75 Query: 66 APCFIGEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKNYR 125 E+ L K P + IE L +P + LL L L ++ Sbjct: 76 PGDIFAEVVLFSKRPYPATAEVIEPGEVLVIPNEEMENLLKKRGEIALNLIKVLLYRLDL 135 Query: 126 NIVSLTQNQSFPLVNRLAAFILLSQEGDLYHEKHTQAAEYLGVSYRHLLYVLAQFIHDGL 185 + + + R+ + +L G + + + A GVS ++ +F G+ Sbjct: 136 ANQKIKELALKDSLARVCSVLLR--YGPVINLSQQEIANLAGVSRETASRIINEFKRLGV 193 Query: 186 LIKSKKGYLIKNRKQLSGLA 205 L + I N +L + Sbjct: 194 LRAEGRSLEIINYDKLKDFS 213 >UniRef50_Q2SDD5 CAMP-binding protein-catabolite gene activator and regulatory subunit of cAMP-dependent protein kinase n=3 Tax=Gammaproteobacteria RepID=Q2SDD5_HAHCH Length = 216 Score = 203 bits (519), Expect = 2e-51, Method: Composition-based stats. Identities = 36/200 (18%), Positives = 67/200 (33%), Gaps = 6/200 (3%) Query: 4 SAFKDCFLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDF 63 S F L + F ++ EG L+ + GR R++ + NG+ ++ Sbjct: 11 SGFDAEQLQHLEKHAVFRCFQKNSIVITEGDHSDSLYIIVSGRVRVFCSDENGKEVTLND 70 Query: 64 FAAPCFIGEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKN 123 A + GE+ L D +V A E C L L L + L+ + Sbjct: 71 LKAGEYFGELALFDDKERSASVMATEPCRFLMLNKSSLLEAFRQTPDLAYNLIIHLTQRV 130 Query: 124 YRNIVSLTQNQSFPLVNRLAAFILLSQEGD------LYHEKHTQAAEYLGVSYRHLLYVL 177 ++ + R+A+ +L E + A +G S + ++ Sbjct: 131 RALTNNVKNLALMDVYGRVASTLLQLSERKGDRLITEIPLTQQEIANRVGASREMVSRIM 190 Query: 178 AQFIHDGLLIKSKKGYLIKN 197 G + KK +I + Sbjct: 191 KDLEIGGYIKVEKKKIVIND 210 >UniRef50_Q89HD2 Bll6060 protein n=3 Tax=Bradyrhizobium RepID=Q89HD2_BRAJA Length = 242 Score = 203 bits (519), Expect = 3e-51, Method: Composition-based stats. Identities = 30/211 (14%), Positives = 69/211 (32%), Gaps = 7/211 (3%) Query: 4 SAFKDCFLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDF 63 + + L + + I +G + LF + G ++ ++ +GR ++++ Sbjct: 27 ADLEPDALDQLCRYAKHTTVKRGATIAAKGDPGNNLFAVISGTVKISSSSPDGRNAILNL 86 Query: 64 FAAPCFIGEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKN 123 GEI ++D A C + + + P + + K L + Sbjct: 87 IGPGEIFGEIAVLDGAPRSADATANTNCELYIIDRRDFLPFVKSQPALAMKFIELLCARL 146 Query: 124 YRNIVSLTQNQSFPLVNRLAAFILLSQEGDLYH-------EKHTQAAEYLGVSYRHLLYV 176 + Q L RLA+ +L E + + +E +G++ + Sbjct: 147 RWTSQQVEQVILQNLPGRLASALLGLTEERKFDSGSGTLAITQQEISEMVGMTRESINKQ 206 Query: 177 LAQFIHDGLLIKSKKGYLIKNRKQLSGLALE 207 L + + ++ + L LA Sbjct: 207 LRAWAGRNWVRLEHGAIVVLDTDALRELAES 237 >UniRef50_B2V833 Transcriptional regulator, Crp/Fnr family n=2 Tax=Aquificales RepID=B2V833_SULSY Length = 223 Score = 202 bits (515), Expect = 7e-51, Method: Composition-based stats. Identities = 44/204 (21%), Positives = 86/204 (42%), Gaps = 1/204 (0%) Query: 4 SAFKDCFLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDF 63 S + L +++ +R+ + + EG++ L+ L G+ ++Y T G I+ Sbjct: 13 SQLSEETLRKLASISRVKEYEPGQVLFFEGEKAENLYILLEGKLKVYKTTFKGIEVFINQ 72 Query: 64 FAAPCFIGEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKN 123 F IGE+ +K P + I E L + + + L + L + +LS+K Sbjct: 73 FGPVTLIGEMANFEKVPYPATAEFITEGKVLIINFRTFEEEFLKNPEILVSIIKSLSNKI 132 Query: 124 YRNIVSLTQNQSFPLVNRLAAFILLSQEGDLYHEKHTQAAEYLGVSYRHLLYVLAQFIHD 183 + R+A IL S E KH Q A +L ++ L V+++ Sbjct: 133 RMLNKFIDSTVVLSADARVAKLILESPEIFEV-LKHNQIASFLNITPETLSRVISRLKQK 191 Query: 184 GLLIKSKKGYLIKNRKQLSGLALE 207 G++ + +IK+R +L ++ + Sbjct: 192 GIIFIDGRKIIIKDRDKLKKISKD 215 >UniRef50_C6C034 Transcriptional regulator, Crp/Fnr family n=1 Tax=Desulfovibrio salexigens DSM 2638 RepID=C6C034_DESAD Length = 226 Score = 202 bits (514), Expect = 1e-50, Method: Composition-based stats. Identities = 33/209 (15%), Positives = 67/209 (32%), Gaps = 5/209 (2%) Query: 4 SAFKDCFLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDF 63 + L + + I G + + + G+ ++Y G+ +I Sbjct: 14 AGLSAEQLEKLEQIVVPRELKKGEQIFSAGGDATGFYSIKSGKVKIYRESLAGKEQIIHI 73 Query: 64 FAAPCFIGEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKN 123 F A GE+ + P + + + L P + ++ D + LS + Sbjct: 74 FGAGEIFGEVPVFQGACYPASSVTLAKSKLLYFPRDSFERVIREDPDLAMSMLALLSGRL 133 Query: 124 YRNIVSLTQNQSFPLVNRLAAFIL-----LSQEGDLYHEKHTQAAEYLGVSYRHLLYVLA 178 + + + + RLA+++L + A YLG L V Sbjct: 134 RQLVNQVAALSLSEVPARLASYLLLLKSTQNSNILELDLPKGLIASYLGTIQETLSRVFK 193 Query: 179 QFIHDGLLIKSKKGYLIKNRKQLSGLALE 207 + GL+ +K I + L +A Sbjct: 194 KMSEQGLIKVERKTIEIIDEASLELIASG 222 >UniRef50_Q6AL49 Probable transcription regulator (Fnr-like) n=1 Tax=Desulfotalea psychrophila RepID=Q6AL49_DESPS Length = 222 Score = 201 bits (513), Expect = 1e-50, Method: Composition-based stats. Identities = 31/209 (14%), Positives = 73/209 (34%), Gaps = 5/209 (2%) Query: 4 SAFKDCFLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDF 63 + L ++ T+ + E + + + GR ++Y A G+ ++ Sbjct: 14 AGLPGEQLAQLATITKEISVKRGTSLFFEQDPGNGFYLIVSGRVKVYKISAGGKEQILHI 73 Query: 64 FAAPCFIGEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKN 123 GE + P +++ + L P + + L+ ++ L + K Sbjct: 74 LKDLETFGEAAVFQGKPFPANGESLVDTELLYFPREKFVSLIERNSQLALNLLAIFATKL 133 Query: 124 YRNIVSLTQNQSFPLVNRLAAFILLSQEGD-----LYHEKHTQAAEYLGVSYRHLLYVLA 178 + + + +RLA ++LL E Q A LG + L + Sbjct: 134 RKFTRQVEALSLQEVPHRLAKYLLLLTEEQDSLSLRLEISKGQLASLLGTAPETLSRIFG 193 Query: 179 QFIHDGLLIKSKKGYLIKNRKQLSGLALE 207 QF +G+++ + + ++ +L + Sbjct: 194 QFASEGIIVIHGRAIEVVDKGKLKEKVED 222 >UniRef50_A4J2D4 Transcriptional regulator, Crp/Fnr family n=4 Tax=Clostridia RepID=A4J2D4_DESRM Length = 227 Score = 200 bits (510), Expect = 3e-50, Method: Composition-based stats. Identities = 33/210 (15%), Positives = 69/210 (32%), Gaps = 10/210 (4%) Query: 5 AFKDCFLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDFF 64 + + D+S+ + I EG+ L+ L G +L L +GR ++ F Sbjct: 16 GLSEEQIRDLSSLLLERSYQKGRIIFMEGEPGEALYVLKSGLIKLTKRLEDGREHILHFV 75 Query: 65 AAPCFIGEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKNY 124 E+ L + P + E+C L + L+ + + +S + Sbjct: 76 NPGEVFAEVVLFEGGDYPATAEVQEDCIVGVLRNQDIERLISQNPNMAVSMLRIMSRRLR 135 Query: 125 RNIVSLTQNQSFPLVNRLAAFILLSQEG----------DLYHEKHTQAAEYLGVSYRHLL 174 + RL+ +L + + + + A G S + Sbjct: 136 TAQEKVMNLALHDTARRLSFTLLKMSQEHGIQKNDGILININLTNQELASLTGSSRETIN 195 Query: 175 YVLAQFIHDGLLIKSKKGYLIKNRKQLSGL 204 +L F G + ++ + +R +L L Sbjct: 196 RMLNSFKRAGAIDVDRQQITVLDRNKLEDL 225 >UniRef50_B5VZ90 Transcriptional regulator, Crp/Fnr family n=1 Tax=Arthrospira maxima CS-328 RepID=B5VZ90_SPIMA Length = 237 Score = 198 bits (506), Expect = 8e-50, Method: Composition-based stats. Identities = 34/219 (15%), Positives = 72/219 (32%), Gaps = 15/219 (6%) Query: 4 SAFKDCFLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDF 63 S + + + ++ +F + + +G F + G+ +++ ANG+ ++ Sbjct: 18 SGLSESEVIPFTPIAQIPNFAKSEMVFNQGNP-EVFFIVKMGKVKVFKVSANGKEQIVHI 76 Query: 64 FAAPCFIGEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKN 123 F + E+ +D P + A+E + P + + +L L +L Sbjct: 77 FQLGDYFAEVPALDGQPFPNSAAALEPTELVFFPRELFLKVLHQSPTVSVNLLTSLCQHL 136 Query: 124 YRNIVSLTQNQSFPLVNRLAAFILLSQEGDL--------------YHEKHTQAAEYLGVS 169 + + RLAA++L D + A LG Sbjct: 137 RELTSLIDSLSFQDVPQRLAAYLLNLSNRDFQQINSGRETDRLVTLDINKGELASLLGTI 196 Query: 170 YRHLLYVLAQFIHDGLLIKSKKGYLIKNRKQLSGLALEM 208 L A+ GL+ + I N + L + + Sbjct: 197 PATLSRAFAKLSQKGLIAVNGSQIQIFNHQGLQEFSQSL 235 >UniRef50_Q5NXU3 Catabolite gene activator (CAMP receptor protein) (CAMP-regulatory protein) n=4 Tax=Rhodocyclaceae RepID=Q5NXU3_AZOSE Length = 223 Score = 198 bits (504), Expect = 1e-49, Method: Composition-based stats. Identities = 28/201 (13%), Positives = 71/201 (35%), Gaps = 6/201 (2%) Query: 4 SAFKDCFLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDF 63 D L VS + +V G++ +++ + G ++ + +GR ++ Sbjct: 19 QGLSDDTLATVSRLAMMRRIPRGQSVVHAGERCDFVYLVLTGSLKVVVSDEDGREVILTI 78 Query: 64 FAAPCFIGEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKN 123 GE+ + + V A+ + + +R +L + ++ L+ + Sbjct: 79 LGQGELFGEMSMFGEQPRSATVVAVMPSDLVMIAKNDFRTILQGNFEVAWRIMANLADRL 138 Query: 124 YRNIVSLTQNQSFPLVNRLAAFILLSQEG------DLYHEKHTQAAEYLGVSYRHLLYVL 177 + + R+A +L E + A+ +G S + V+ Sbjct: 139 RSADRKIESLALMDVYGRVARLLLEMSEEVNGAVVVVRKITKQDIAKMIGASREMVSRVM 198 Query: 178 AQFIHDGLLIKSKKGYLIKNR 198 GL+ ++ G ++++R Sbjct: 199 KDLAAQGLIEETGAGIVLRDR 219 >UniRef50_C8X3D0 Transcriptional regulator, Crp/Fnr family n=1 Tax=Desulfohalobium retbaense DSM 5692 RepID=C8X3D0_DESRD Length = 227 Score = 198 bits (504), Expect = 1e-49, Method: Composition-based stats. Identities = 34/214 (15%), Positives = 78/214 (36%), Gaps = 8/214 (3%) Query: 4 SAFKDCFLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDF 63 L ++ + R+ F + IV + + + + G+ ++Y + A G+ + Sbjct: 14 QDLDANQLALLAREARVKVFRPGEIIVSQEEPVRAFYLVLSGQVKIYRSSAEGKEQTLYL 73 Query: 64 FAAPCFIGEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKN 123 F ++ P A+E + LP + + L + + + LS + Sbjct: 74 FGPGEPFCLCAAFEEQGYPANAAALESSEIVILPGRTFENLAREAPSLIFPMLLVLSRRL 133 Query: 124 YRNIVSLTQNQSFPLVNRLAAFILLSQE--------GDLYHEKHTQAAEYLGVSYRHLLY 175 ++ + L R+A F+L + H + A+ LG + L Sbjct: 134 KESMQLVETLSLKELPQRVATFLLHAAPRVADGETLDIRLPLTHRELAKMLGATPEGLSR 193 Query: 176 VLAQFIHDGLLIKSKKGYLIKNRKQLSGLALEMD 209 V + + GL+ + + + +R L L+ ++ Sbjct: 194 VFKRLQNRGLVSVNGRAIRVHDRAGLERLSHGVE 227 >UniRef50_B0K8F6 Transcriptional regulator, Crp/Fnr family n=11 Tax=Thermoanaerobacterales RepID=B0K8F6_THEP3 Length = 225 Score = 198 bits (504), Expect = 2e-49, Method: Composition-based stats. Identities = 32/211 (15%), Positives = 81/211 (38%), Gaps = 10/211 (4%) Query: 4 SAFKDCFLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDF 63 + +D L ++ + F I EG++ ++++ G+ ++ T + G+ +I Sbjct: 14 NELEDKSLEEIHKILIIKSFKKGSIIFMEGEKGEAIYFVKSGKVKISKTSSVGKEHIIKI 73 Query: 64 FAAPCFIGEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKN 123 E L P +AIE+ + L + L+L ++ + ++ + Sbjct: 74 MEEGDIFAESVLFVGGEYPATAEAIEDSEVIMLKNQDIENLILKNSKIALSIIKLMAKRL 133 Query: 124 YRNIVSLTQNQSFPLVNRLAAFILLSQEGD----------LYHEKHTQAAEYLGVSYRHL 173 V + + R A+ +L + + A +G S ++ Sbjct: 134 KNVAVIIENLALRDSIGRTASVLLTFAKERGINTKEGILLNLNLNRQDLANIVGTSRENV 193 Query: 174 LYVLAQFIHDGLLIKSKKGYLIKNRKQLSGL 204 +L+Q +G++ ++ +IK+ ++L + Sbjct: 194 TRILSQMDKEGIIHLDRQKIIIKDIERLKEM 224 >UniRef50_B8G111 Transcriptional regulator, Crp/Fnr family n=2 Tax=Desulfitobacterium hafniense RepID=B8G111_DESHD Length = 239 Score = 197 bits (503), Expect = 2e-49, Method: Composition-based stats. Identities = 29/210 (13%), Positives = 70/210 (33%), Gaps = 11/210 (5%) Query: 6 FKDCFLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDFFA 65 D L +S + + EG + + G+ + + G+ ++ + Sbjct: 29 LADEQLAVISGLITRRRYKKGQVLFFEGDVSDKFYIINHGKIKTFKHTREGKEQILYILS 88 Query: 66 APCFIGEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKNYR 125 FIG++ L+ K P +A+E+ L +L + K+ ++ + Sbjct: 89 EGDFIGDLSLLKKSAFPYNAEALEDVGVCTLSKDDLDRILKENPEICLKILESVHDRLVN 148 Query: 126 NIVSLTQNQSFPLVNRLAAFILLSQEGD----------LYHEKHTQAAEYLGVSYRHLLY 175 + + + R+A + + + A ++GV+ + Sbjct: 149 LENLVQTLSTKDVEARIAGLLFNFSKNFGEHKDGKVMLNIALTREEMANFIGVTRETMSR 208 Query: 176 VLAQFIHDGLLI-KSKKGYLIKNRKQLSGL 204 L+ +G+L K +I + L + Sbjct: 209 KLSGMQDEGILELVGNKRIIINRLQDLEAM 238 >UniRef50_P0A9F0 Regulatory protein nsr n=59 Tax=Enterobacteriaceae RepID=NSR_ECO57 Length = 219 Score = 197 bits (503), Expect = 2e-49, Method: Composition-based stats. Identities = 219/219 (100%), Positives = 219/219 (100%) Query: 1 MSESAFKDCFLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSL 60 MSESAFKDCFLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSL Sbjct: 1 MSESAFKDCFLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSL 60 Query: 61 IDFFAAPCFIGEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLS 120 IDFFAAPCFIGEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLS Sbjct: 61 IDFFAAPCFIGEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLS 120 Query: 121 HKNYRNIVSLTQNQSFPLVNRLAAFILLSQEGDLYHEKHTQAAEYLGVSYRHLLYVLAQF 180 HKNYRNIVSLTQNQSFPLVNRLAAFILLSQEGDLYHEKHTQAAEYLGVSYRHLLYVLAQF Sbjct: 121 HKNYRNIVSLTQNQSFPLVNRLAAFILLSQEGDLYHEKHTQAAEYLGVSYRHLLYVLAQF 180 Query: 181 IHDGLLIKSKKGYLIKNRKQLSGLALEMDPENKFSGMMQ 219 IHDGLLIKSKKGYLIKNRKQLSGLALEMDPENKFSGMMQ Sbjct: 181 IHDGLLIKSKKGYLIKNRKQLSGLALEMDPENKFSGMMQ 219 >UniRef50_Q023C9 Transcriptional regulator, Crp/Fnr family n=2 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q023C9_SOLUE Length = 236 Score = 197 bits (502), Expect = 2e-49, Method: Composition-based stats. Identities = 38/209 (18%), Positives = 75/209 (35%), Gaps = 5/209 (2%) Query: 4 SAFKDCFLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDF 63 +A + L ++ F + + EG+ +F + +G +++ T GR ++ Sbjct: 26 AALSENELQGLAQRAVEKRFGTDEMLFWEGEACVGIFLIIQGSVKIFRTSPGGREVMLCI 85 Query: 64 FAAPCFIGEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKN 123 AP + E+ L D P +V+ E L + ++ + K+ + + Sbjct: 86 ETAPASVAELPLFDGGPYPASVRVTEPVVSLFINKSDFQQFCRQNPDVALKVLAVVGRRL 145 Query: 124 YRNIVSLTQNQSFPLVNRLAAFILLSQ-----EGDLYHEKHTQAAEYLGVSYRHLLYVLA 178 + + + + RLA +L + E H + A LG + L Sbjct: 146 RQLVGLVEAMTFGSVTQRLAKMLLDASKEAGPEDFDLPATHQELASRLGTVREVISRNLG 205 Query: 179 QFIHDGLLIKSKKGYLIKNRKQLSGLALE 207 +F GL+ + I NR L A Sbjct: 206 RFRAQGLIKIQDRQVEIVNRAGLQQEAES 234 >UniRef50_A9WTJ5 Transcription regulator, crp family n=122 Tax=Actinomycetales RepID=A9WTJ5_RENSM Length = 270 Score = 197 bits (501), Expect = 3e-49, Method: Composition-based stats. Identities = 39/211 (18%), Positives = 74/211 (35%), Gaps = 10/211 (4%) Query: 6 FKDCFLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDFFA 65 D ++ + + EG Q L+++ G+ +L T +GR SL+ Sbjct: 60 LDDEAFRLLTDELTEVDLSRGASVFHEGDQGDQLYFIVSGKVKLGRTAPDGRESLLAILG 119 Query: 66 APCFIGEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKNYR 125 GE+ L D A+ E L + R LL +L L+ + R Sbjct: 120 PGELFGEMALFDPSPRTATATAVSETRLAGLRNESLRALLQTSPEVSAQLLQALARRLRR 179 Query: 126 NIVSLTQNQSFPLVNRLAAFILLSQEG----------DLYHEKHTQAAEYLGVSYRHLLY 175 +L+ + R+A ++ E + + A+ +G S + Sbjct: 180 TNDNLSDLVFSDVPGRVAKALIDLSERFGRPATDGVLVAHELTQEELAQLVGASRETVNK 239 Query: 176 VLAQFIHDGLLIKSKKGYLIKNRKQLSGLAL 206 LA+F+ G L + +I + +L + Sbjct: 240 ALAEFVQRGWLRLEARAVVILDINRLRQRSR 270 >UniRef50_D1CAF8 Transcriptional regulator, Crp/Fnr family n=1 Tax=Sphaerobacter thermophilus DSM 20745 RepID=D1CAF8_SPHTD Length = 252 Score = 197 bits (501), Expect = 3e-49, Method: Composition-based stats. Identities = 32/213 (15%), Positives = 69/213 (32%), Gaps = 10/213 (4%) Query: 4 SAFKDCFLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDF 63 + + +S + + + G+ + L+ + G+ +L G+ L+D Sbjct: 35 AGLPPAEIDRISLHFSERGYQPGETVYLAGEPATRLYVVAVGKVKLVRPTPAGQNVLLDI 94 Query: 64 FAAPCFIGEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKN 123 F G + + P +A C L++ + +L ++ + Sbjct: 95 LTPGDFFGSLATLGDREYPNTAEAQTACCLLSVDADQFAEILRAYPTVALATLEIVAERL 154 Query: 124 YRNIVSLTQNQSFPLVNRLAAFILLSQEG----------DLYHEKHTQAAEYLGVSYRHL 173 + + P+ RLAA +L + AE G + Sbjct: 155 RDAHEVIEHLSAHPVEARLAATLLKLADRLGEESEHGLLIQMPLSRQDLAEMTGTTTETA 214 Query: 174 LYVLAQFIHDGLLIKSKKGYLIKNRKQLSGLAL 206 VL++F GL+ ++ I + L+ A Sbjct: 215 SRVLSEFRRAGLIRSGRRWVAITDPAGLAKFAE 247 >UniRef50_B8CZ46 Putative transcriptional regulator, Crp/Fnr family n=1 Tax=Halothermothrix orenii H 168 RepID=B8CZ46_HALOH Length = 219 Score = 196 bits (500), Expect = 4e-49, Method: Composition-based stats. Identities = 34/206 (16%), Positives = 77/206 (37%), Gaps = 9/206 (4%) Query: 4 SAFKDCFLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDF 63 S D L + + T + A + + EG +P + + G ++ +G+ +++ Sbjct: 13 SGLNDEQLDLLKSITNKRRYKAGEILFFEGDKPDAFYIVVEGEIQIIKVSYDGKEKILEV 72 Query: 64 FAAPCFIGEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKN 123 F GE+ +ID + I + L + + + L+ K+ LS + Sbjct: 73 MGPGDFFGEMAIIDSKGRSATARVIRDSSLLVVGNQEFLNLVREYPFIALKIIGELSRRL 132 Query: 124 YRNIVSLTQNQSFPLVNRLAAF-------ILLSQEGDLY--HEKHTQAAEYLGVSYRHLL 174 + + + RL F I + E + + H A ++G S + Sbjct: 133 RQANQDIESLAFLDVETRLKKFFRRMTGEIRDNGEAVVIDRNITHQDIARFIGTSRETVT 192 Query: 175 YVLAQFIHDGLLIKSKKGYLIKNRKQ 200 ++ + GLL ++ ++K+ + Sbjct: 193 RIINKLKDKGLLEIKREKIILKDINK 218 >UniRef50_B8D2C4 Putative transcriptional regulator, Crp/Fnr family n=1 Tax=Halothermothrix orenii H 168 RepID=B8D2C4_HALOH Length = 231 Score = 196 bits (500), Expect = 4e-49, Method: Composition-based stats. Identities = 44/218 (20%), Positives = 80/218 (36%), Gaps = 10/218 (4%) Query: 1 MSESAFKDCFLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSL 60 M S + + + F + I E L+ L GR +L A G+ + Sbjct: 13 MVFSKMERDEVALICERAYEKWFRKGEVIFFENDDNRNLYVLVSGRVKLSMLSAEGKEKV 72 Query: 61 IDFFAAPCFIGEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLS 120 + GE+ L D+D P + I++ + LP+K +++ + K+ L+ Sbjct: 73 LTILQEGDIFGEVSLFDQDPLPVTAEVIKDSRLIVLPVKDLENIIMKNPKVAIKIIEALA 132 Query: 121 HKNYRNIVSLTQNQSFPLVNRLAAFILLSQEGDLYH----------EKHTQAAEYLGVSY 170 K + + RLA+ +L + H + A LG S Sbjct: 133 KKTRLLTGQIRDLVFYDAEGRLASLLLRFAKDFGIDVKSGTLIDLVLTHQEIANLLGSSR 192 Query: 171 RHLLYVLAQFIHDGLLIKSKKGYLIKNRKQLSGLALEM 208 + +L QFI +G++ K+ +I +QL M Sbjct: 193 VTVTKLLNQFIDEGIIKTYKRKIVIMKPEQLHDKMQNM 230 >UniRef50_A8MIF1 Transcriptional regulator, Crp/Fnr family n=1 Tax=Alkaliphilus oremlandii OhILAs RepID=A8MIF1_ALKOO Length = 229 Score = 196 bits (499), Expect = 5e-49, Method: Composition-based stats. Identities = 43/205 (20%), Positives = 73/205 (35%), Gaps = 4/205 (1%) Query: 4 SAFKDCFLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDF 63 ++ + +++ F + I G + LF L GR ++ NG+ +I Sbjct: 21 ASMNHDEMLEIAHIASSRTFEKGETIYGAGDEGGTLFVLYSGRIKISRFNVNGKEQVIRI 80 Query: 64 FAAPCFIGEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKN 123 FIGE+ L QA+E L + L+ K+ LS + Sbjct: 81 VGPGEFIGELSLFSSLPLTDHAQALETSTVCVLEGARLKELMTKYASIAFKILDELSRRL 140 Query: 124 YRNIVSLTQNQSFPLVNRLAAFILLSQE---GDLYHEKHTQAAEYLGVSYRHLLYVLAQF 180 + + + R+A +L E L + A +G++ L L F Sbjct: 141 EKAENLIENISLSTVTQRVAQVLLELSEEQNEILLNMTKGDLASQIGMTQETLSRKLGAF 200 Query: 181 IHDGLLIKSK-KGYLIKNRKQLSGL 204 +GL+ K IKNR+ L L Sbjct: 201 QEEGLIELVGHKRIRIKNRQGLEKL 225 >UniRef50_D2L3L7 Transcriptional regulator, Crp/Fnr family n=1 Tax=Desulfovibrio sp. FW1012B RepID=D2L3L7_9DELT Length = 254 Score = 196 bits (499), Expect = 6e-49, Method: Composition-based stats. Identities = 40/215 (18%), Positives = 70/215 (32%), Gaps = 25/215 (11%) Query: 4 SAFKDCFLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDF 63 + L ++ + + I G + F + G+ R+Y T G+ ++ Sbjct: 14 AGLGPKELAALAGIAEVRSYAKGQDIFFSGDKALGFFSVASGKVRIYQTSLAGKEHILHV 73 Query: 64 FAAPCFIGEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKN 123 F E+ + P + QA+E+ L P + +R LL D + L+ + Sbjct: 74 FGPGEVFAEVAVFSGGVYPASAQALEDGDYLFFPRERFRRLLAEDPDLAMNMLGLLAVRL 133 Query: 124 YRNIVSLTQNQSFPLV---------------NRLAAFILLSQEGDLYHEKHTQAAEYLGV 168 + + L + RL + L Q A YLG Sbjct: 134 RQLVKKLEDLSLREVPARLAAHLLLLAAESKKRLLSLGL----------PKGQLAAYLGT 183 Query: 169 SYRHLLYVLAQFIHDGLLIKSKKGYLIKNRKQLSG 203 L VL +F +GL+ S I + L Sbjct: 184 IPETLSRVLRRFSDEGLIHLSGNTVEILDPAGLER 218 >UniRef50_B8GAV8 Transcriptional regulator, Crp/Fnr family n=3 Tax=Chloroflexus RepID=B8GAV8_CHLAD Length = 224 Score = 195 bits (498), Expect = 7e-49, Method: Composition-based stats. Identities = 40/208 (19%), Positives = 75/208 (36%), Gaps = 5/208 (2%) Query: 5 AFKDCFLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDFF 64 D + ++ + + + IV G+ P ++ + GR +L NGR +++ Sbjct: 17 HLPDHVVQALAMIAQPRSYQSGAVIVLAGEPPQAMYTIVAGRVKLVRIALNGREQIVNVM 76 Query: 65 AAPCFIGEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKNY 124 A + + D P VQAI + L LP+ R L++ L L + + Sbjct: 77 GAGQHFNTVPIFDHGPCPVNVQAITDVDLLVLPIDDMRRLVVEHPLLAMALLREFAGRLC 136 Query: 125 RNIVSLTQNQSFPLVNRLAAFILLS---QEGDLY--HEKHTQAAEYLGVSYRHLLYVLAQ 179 + + + RLA +L E + + A + + L Q Sbjct: 137 HMVNLIDNIALHSVQGRLAQLLLNRAIASEQGEFVAPLTQAEMAAMIDTVREMVSRTLHQ 196 Query: 180 FIHDGLLIKSKKGYLIKNRKQLSGLALE 207 F GL+ + I +R+ L+ A Sbjct: 197 FEAQGLIRIERGAIAICDREGLAACAES 224 >UniRef50_Q67K68 Putative cyclic nucleotide-binding transcriptional regulator n=1 Tax=Symbiobacterium thermophilum RepID=Q67K68_SYMTH Length = 223 Score = 195 bits (497), Expect = 8e-49, Method: Composition-based stats. Identities = 39/209 (18%), Positives = 74/209 (35%), Gaps = 5/209 (2%) Query: 4 SAFKDCFLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDF 63 D L ++A R H+ + EG ++++ +GR R+ ANG+ ++ Sbjct: 14 QGLSDEELARIAAIARERHYRKGTILFNEGDPGEAIYFIKKGRVRVSRLAANGQEQVLRV 73 Query: 64 FAAPCFIGEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKN 123 + +G + L DK P Q E+ +A + LL + + Sbjct: 74 WGPGHEVGLVVLADKAPYPATAQVTEDSVLIAFRVDDLVQLLPESRTLAANAFCLVGRRL 133 Query: 124 YRNIVSLTQNQSFPLVNRLAAFILLS-----QEGDLYHEKHTQAAEYLGVSYRHLLYVLA 178 + + RLAA +L + H + A +G S + VL Sbjct: 134 RLARDTAHELAVHNTHGRLAALLLRMKAEQGSDVINLGMTHQEIAGMIGTSRETVTRVLG 193 Query: 179 QFIHDGLLIKSKKGYLIKNRKQLSGLALE 207 F G + + +I++ ++L E Sbjct: 194 DFRRTGCIAVQGESVVIRDERKLREWMGE 222 >UniRef50_C1A7L5 Crp family transcriptional regulator n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1A7L5_GEMAT Length = 229 Score = 194 bits (495), Expect = 1e-48, Method: Composition-based stats. Identities = 39/197 (19%), Positives = 70/197 (35%), Gaps = 5/197 (2%) Query: 15 SADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDFFAAPCFIGEIE 74 + TR F IV EG L+ + G ++ +GR ++ GE+ Sbjct: 30 AEVTREQRFAKGALIVSEGDAGDALYVVRSGEVKVVLVGDDGREVILQVLGVGDHFGELA 89 Query: 75 LIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKNYRNIVSLTQNQ 134 LID V A L L +R + + +L V LS + + ++ Sbjct: 90 LIDGRPRSAHVVATHASSLLVLRRPEFRRQVEQNPKVAWELMVELSRRLRQADGTIGSLV 149 Query: 135 SFPLVNRLAAFILLSQEGDLY-----HEKHTQAAEYLGVSYRHLLYVLAQFIHDGLLIKS 189 + R+A +L H A+ +G S + +++F G+++ Sbjct: 150 LLDVPGRVAKVLLEHATPGEPASLVKQLTHQTIAQMIGASRETVSRAMSEFQDQGMIMVQ 209 Query: 190 KKGYLIKNRKQLSGLAL 206 ++ I NR L A Sbjct: 210 RRVVTIVNRGALESRAR 226 >UniRef50_B9DSJ9 Crp family regulatory protein n=17 Tax=Firmicutes RepID=B9DSJ9_STRU0 Length = 249 Score = 194 bits (495), Expect = 1e-48, Method: Composition-based stats. Identities = 31/195 (15%), Positives = 73/195 (37%), Gaps = 6/195 (3%) Query: 4 SAFKDCFLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDF 63 + ++ + ++ R + + + +EG + L+ +++G+ R+Y +G+ L+ Sbjct: 42 NHLEEEQMDEIMKVMRSISYKKGEVVYREGDTFNALYVVSKGKIRIYRLSESGKEQLLRI 101 Query: 64 FAAPCFIGEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKN 123 F GE+ L + +A+ + + + LL K S++ Sbjct: 102 LNPGDFTGELALFRESIHEAYAEAMSDTDVCMISKNDLQEFLLKYPTISLKFLSEFSNRL 161 Query: 124 YRNIVSLTQNQSFPLVNRLAAFILLSQEGD------LYHEKHTQAAEYLGVSYRHLLYVL 177 + T+ + + +R+A F+ +GD A YLG + + Sbjct: 162 ETSEKQTTRFATEKVDSRIALFLAECLDGDEGSMEIELPMNRKDLASYLGTTPETISRKF 221 Query: 178 AQFIHDGLLIKSKKG 192 A F G + + + Sbjct: 222 ADFEEAGYIKQKRNR 236 >UniRef50_B5YAP2 Cyclic nucleotide-binding:Bacterial regulatory protein, Crp n=2 Tax=Dictyoglomus RepID=B5YAP2_DICT6 Length = 225 Score = 194 bits (495), Expect = 2e-48, Method: Composition-based stats. Identities = 37/209 (17%), Positives = 73/209 (34%), Gaps = 10/209 (4%) Query: 5 AFKDCFLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDFF 64 F D L + + + I Q+ ++ F + GR ++ G+ ++ Sbjct: 15 DFSDDELEKLLLICKEKSYPKDSIIFQKEDPGNFFFLICSGRVKVIIETEEGKEGILAIL 74 Query: 65 AAPCFIGEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKNY 124 F GE+ L+D + V A+EE + + + LL K+ TLS + Sbjct: 75 YPTEFFGEMSLLDGEPRSATVVALEETNVIIIERNEFLSLLYKHPELALKILKTLSLRLR 134 Query: 125 RNIVSLTQNQSFPLVNRLAAFILLSQEG----------DLYHEKHTQAAEYLGVSYRHLL 174 + + R+A ++ + +GVS + Sbjct: 135 KANRQIETLMFLDASGRIARLLIDIARDRGKKVDEGVLIDLEFTRQELGNLIGVSRETTI 194 Query: 175 YVLAQFIHDGLLIKSKKGYLIKNRKQLSG 203 +L F +G+L + +IK+ K+L Sbjct: 195 RILKSFEEEGILSIERNHIIIKDIKELER 223 >UniRef50_Q1AV16 Transcriptional regulator, Crp/Fnr family n=1 Tax=Rubrobacter xylanophilus DSM 9941 RepID=Q1AV16_RUBXD Length = 249 Score = 194 bits (495), Expect = 2e-48, Method: Composition-based stats. Identities = 38/212 (17%), Positives = 79/212 (37%), Gaps = 10/212 (4%) Query: 6 FKDCFLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDFFA 65 D L DV R + A + I G + + G+ +L A GR L++ Sbjct: 35 LDDAQLADVDGVFRERGYAAGERIYSGGDPAGTFYVVAVGKVKLVRPSAQGRDVLLEILG 94 Query: 66 APCFIGEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKNYR 125 +G + + D P + +A +C LA+ R ++ L LS + Sbjct: 95 PGDTLGTVPMFGDDVYPDSAEAQTDCCLLAITAADLRTVVERYPPVAHTLLEVLSGQLRS 154 Query: 126 NIVSLTQNQSFPLVNRLAAFILLSQEG----------DLYHEKHTQAAEYLGVSYRHLLY 175 ++ Q + + +R+AA +L + A+ G + Sbjct: 155 AREAIRQASAGSVESRVAASLLKLADRLGSDRRGETLIQVPLTRQDLADMTGAQVETVSR 214 Query: 176 VLAQFIHDGLLIKSKKGYLIKNRKQLSGLALE 207 V++++ +GL+ + + +R++L+ +A Sbjct: 215 VMSRWRKEGLIRSGRGWVAVVDRERLAAIAAG 246 >UniRef50_Q07J90 Transcriptional regulator, Crp/Fnr family n=11 Tax=Bacteria RepID=Q07J90_RHOP5 Length = 240 Score = 193 bits (493), Expect = 3e-48, Method: Composition-based stats. Identities = 33/222 (14%), Positives = 71/222 (31%), Gaps = 10/222 (4%) Query: 4 SAFKDCFLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDF 63 S L V D R F + Q+G+ F L G R T G ++ + Sbjct: 16 SGLNAQDLDAVLHDARSARFAKNSAVFQQGEDAHSFFLLLHGHVRASKTTPTGEQVVVRY 75 Query: 64 FAAPCFIGEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKN 123 + G I P A+++ L P + L+ + + Sbjct: 76 VSPGETFGVATAIGLSRYPATATAVDDSVVLVWPAGAWPRLVERYPALSANTLRVVGSRL 135 Query: 124 YRNIVSLTQNQSFPLVNRLAAFILLSQEG----------DLYHEKHTQAAEYLGVSYRHL 173 + + + + R+A +L + + A+ G + + Sbjct: 136 QETHTRVIEMSTQQVEQRVARALLRLAKQSGRKVEQGVEIAFPISRQDIAQMTGTTLHTV 195 Query: 174 LYVLAQFIHDGLLIKSKKGYLIKNRKQLSGLALEMDPENKFS 215 +L+ + GL+ ++ ++++ L LA +++ S Sbjct: 196 SRLLSGWEQRGLIESGRQRIVLRDAHALVVLAEAGSRDSEAS 237 >UniRef50_C7PII7 Transcriptional regulator, Crp/Fnr family n=1 Tax=Chitinophaga pinensis DSM 2588 RepID=C7PII7_CHIPD Length = 236 Score = 193 bits (491), Expect = 5e-48, Method: Composition-based stats. Identities = 35/204 (17%), Positives = 79/204 (38%), Gaps = 9/204 (4%) Query: 11 LTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDFFAAPCFI 70 L ++ + + + QEG P ++ + G+ +L +GR ++ I Sbjct: 29 LEEIESAKVCTTYKKGQIVFQEGAYPFGIYCVNTGKIKLSHCGDDGREQIVRLAKPGDII 88 Query: 71 GEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKNYRNIVSL 130 G L+ + + A+++ +P + +L D ++ L+ + + + + Sbjct: 89 GYKALLSAERYTASAIALDDSSVCFIPKDLFMSVLQKDASLSLEMMRILASELRKAEMKI 148 Query: 131 TQNQSFPLVNRLAAFILLSQE---------GDLYHEKHTQAAEYLGVSYRHLLYVLAQFI 181 T P+ RLA +L +E + A +G + + +L++F Sbjct: 149 THLAQKPVRERLAETLLFIRETYGVEQDGSTLNVRLSREEIANLVGTATESAIRLLSEFK 208 Query: 182 HDGLLIKSKKGYLIKNRKQLSGLA 205 DGL+ K + N ++L+ A Sbjct: 209 KDGLIELQGKKIRLLNPEELTRTA 232 >UniRef50_D1U5Y5 Transcriptional regulator, Crp/Fnr family n=1 Tax=Desulfovibrio aespoeensis Aspo-2 RepID=D1U5Y5_9DELT Length = 220 Score = 193 bits (491), Expect = 5e-48, Method: Composition-based stats. Identities = 31/206 (15%), Positives = 72/206 (34%), Gaps = 8/206 (3%) Query: 4 SAFKDCFLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDF 63 + D + ++ R + + IV + F + G +++ + +G+ ++ Sbjct: 14 ANLDDDAVQALAERARTRVYGPGERIVSQSDNIQAFFIVLSGHVKIFRSNEDGKEQILYL 73 Query: 64 FAAPCFIGEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKN 123 P V A+E+ +P + + L L K+ TL+ + Sbjct: 74 VQEGQPFCFCTAFTDRPYPVNVTALEKSQVATIPAADMEDMARREPLLLLKIMQTLAGRL 133 Query: 124 YRNIVSLTQNQSFPLVNRLAAFILLSQ--------EGDLYHEKHTQAAEYLGVSYRHLLY 175 + + R+A F++ ++ E H + A+ +G + L Sbjct: 134 LEAMNMVESLALHGTQERIAHFLMHAETCSASGPGESFRLPVSHRELAKIVGTTPETLSR 193 Query: 176 VLAQFIHDGLLIKSKKGYLIKNRKQL 201 V+ +F + + + K I +R L Sbjct: 194 VIQKFKRNKTIEANGKTIRILDRNAL 219 >UniRef50_Q2W4U7 cAMP-binding protein-catabolite gene activator and regulatory subunit of cAMP-dependent protein kinase n=2 Tax=Magnetospirillum RepID=Q2W4U7_MAGSA Length = 239 Score = 192 bits (490), Expect = 5e-48, Method: Composition-based stats. Identities = 40/206 (19%), Positives = 74/206 (35%), Gaps = 10/206 (4%) Query: 9 CFLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDFFAAPC 68 L +++A ++ AR+ + +G L+ + +G R+ A+GR Sbjct: 30 DLLDELAAKAKMVKVDARETLFSKGDPGDRLYLVAKGLIRIGVLSADGREVTYGLIKPGQ 89 Query: 69 FIGEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKNYRNIV 128 GEI ++D A+E +AL K L L L + R Sbjct: 90 LFGEIAVLDGKERSADATAMEATELIALERKDVHTFLHRHPAQALHLIEVLCERIRRADN 149 Query: 129 SLTQNQSFPLVNRLAAFILLSQE----------GDLYHEKHTQAAEYLGVSYRHLLYVLA 178 L L +RLA +L+ + + A++LG+S + VL+ Sbjct: 150 QLEDMVFLSLPSRLAKHLLMLVQTMGTKAKPGTPSAIKLSQQEIADHLGISRESVNKVLS 209 Query: 179 QFIHDGLLIKSKKGYLIKNRKQLSGL 204 ++ G++ + + L GL Sbjct: 210 KWEQAGIVTLGRGQITLNKTAALEGL 235 >UniRef50_C7RQ03 Transcriptional regulator, Crp/Fnr family n=1 Tax=Candidatus Accumulibacter phosphatis clade IIA str. UW-1 RepID=C7RQ03_9PROT Length = 241 Score = 192 bits (488), Expect = 9e-48, Method: Composition-based stats. Identities = 33/199 (16%), Positives = 64/199 (32%), Gaps = 6/199 (3%) Query: 4 SAFKDCFLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDF 63 + D L ++ IV+ G L+ L G A++ + GR ++ Sbjct: 24 AGVPDSQLEQIAKVAFHRRVPRLTTIVRAGDSTDSLYVLISGGAKVLNSDEEGREVILTL 83 Query: 64 FAAPCFIGEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKN 123 F GE+ LID V A E C L + ++ L + + +L + Sbjct: 84 LGPGEFFGEMGLIDGSPRSADVVATETCELLVITKNDFKRCLAENFDLCLNIMKSLVQRL 143 Query: 124 YRNIVSLTQNQSFPLVNRLAAFILLSQEG------DLYHEKHTQAAEYLGVSYRHLLYVL 177 ++ + R+A ++ E A+ +G S + V+ Sbjct: 144 READRNIESLALLDVYGRVAKLLIDFSEDERGQRVIRRRLTKQDIAKMIGASREMVSRVM 203 Query: 178 AQFIHDGLLIKSKKGYLIK 196 + G + +I Sbjct: 204 KDLENRGYFRVEEGRIVII 222 >UniRef50_Q13B58 Transcriptional regulator, Crp/Fnr family n=13 Tax=Bacteria RepID=Q13B58_RHOPS Length = 236 Score = 192 bits (488), Expect = 1e-47, Method: Composition-based stats. Identities = 32/222 (14%), Positives = 75/222 (33%), Gaps = 11/222 (4%) Query: 4 SAFKDCFLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDF 63 + L + R + ++G+ F L G R G ++ + Sbjct: 16 AGLTADELDAILQQARSIRVPKNANVFEQGEDAHSFFVLLHGHVRASKLTPAGEQVVVRY 75 Query: 64 FAAPCFIGEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKN 123 + +G I + P A+++ LA P + L+ T+ + Sbjct: 76 VSPGETLGVAMAIGLLNYPATATAVDDSIVLAWPTAAWPRLVEQYPSLATNTLRTVGARL 135 Query: 124 YRNIVSLTQNQSFPLVNRLAAFILLSQEG----------DLYHEKHTQAAEYLGVSYRHL 173 + + + + R+A +L + + A+ G + + Sbjct: 136 QETHSRVVEISTQQVEQRVAHALLRLAKQSGRKVANGVEIDFPISRQDIAQMTGTTLHTV 195 Query: 174 LYVLAQFIHDGLLIKSKKGYLIKNRKQLSGLALEMDPENKFS 215 +L+ + GL+ ++ +++N QL LA + P+++ S Sbjct: 196 SRLLSGWEQKGLIESGRQRIVLRNLDQLVVLADQ-TPDDQTS 236 >UniRef50_UPI0001C34903 Crp/FNR family transcriptional regulator n=1 Tax=Providencia rettgeri DSM 1131 RepID=UPI0001C34903 Length = 244 Score = 191 bits (487), Expect = 1e-47, Method: Composition-based stats. Identities = 32/217 (14%), Positives = 76/217 (35%), Gaps = 10/217 (4%) Query: 4 SAFKDCFLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDF 63 S D ++ + L + + + +G L+ + +G ++ + ++GR + + Sbjct: 28 SNLPDYLISILMTCATLRFYPDGEMVHYQGDPARGLYAVIQGSVKVSSISSDGRECVFRY 87 Query: 64 FAAPCFIGEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKN 123 + + GEI ++DK +AI L + K +L +F + L + L Sbjct: 88 LSPGNWFGEIAMLDKSARTHDAKAISPTILLTISPKDLTMILEKHPVFYQFLNILLCKVI 147 Query: 124 YRNIVSLTQNQSFPLVNRLAAFILLSQEG----------DLYHEKHTQAAEYLGVSYRHL 173 + + + RLA +L EG + A + + + + Sbjct: 148 RNAFTIINDSALLSVSARLAKRLLSLAEGYGEPHEKGIQLSLYLTQDDLATIINTTRQTI 207 Query: 174 LYVLAQFIHDGLLIKSKKGYLIKNRKQLSGLALEMDP 210 L + G + ++ N L ++ + + Sbjct: 208 NKRLVAWEKLGWIDAKYGKIILVNLPALKQISEDDEE 244 >UniRef50_Q1IUT3 Transcriptional regulator, Crp/Fnr family n=1 Tax=Candidatus Koribacter versatilis Ellin345 RepID=Q1IUT3_ACIBL Length = 234 Score = 191 bits (486), Expect = 2e-47, Method: Composition-based stats. Identities = 34/215 (15%), Positives = 82/215 (38%), Gaps = 10/215 (4%) Query: 4 SAFKDCFLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDF 63 S D ++S + + I EG + LF + G R++ + A+GR ++ Sbjct: 19 SGLSDVEWNELSQRVVPRKYPNGEMIFSEGDACAGLFVVQSGHIRIFKSSASGREQVLSI 78 Query: 64 FAAPCFIGEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKN 123 + E+ + D P + A+ +C L L + + L + K+ + + Sbjct: 79 DGPGSSVAELPVFDGGSYPASAVAVTDCTLLFLSKQDFHALCMKYPEMALKVLRVVGGRL 138 Query: 124 YRNIVSLTQNQSFPLVNRLAAFIL--------LSQEGDLYHEK--HTQAAEYLGVSYRHL 173 R + + + + +RL A +L +++G + + A +G + Sbjct: 139 RRLVGIIEELSFTTVRHRLVALLLRLAKTEGNKTEQGITITLPAHNQELAAQIGTVRELV 198 Query: 174 LYVLAQFIHDGLLIKSKKGYLIKNRKQLSGLALEM 208 +++ +G++ + + ++K+ L E Sbjct: 199 SRNMSRLQQEGMIEQDGRTVILKDPMGLQRTLEEA 233 >UniRef50_Q5P8X7 Transcriptional regulator, Dnr type n=9 Tax=Bacteria RepID=Q5P8X7_AZOSE Length = 259 Score = 190 bits (484), Expect = 3e-47, Method: Composition-based stats. Identities = 37/210 (17%), Positives = 70/210 (33%), Gaps = 11/210 (5%) Query: 4 SAFKDCFLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDF 63 S F + + R + + +G + G+ +L T A G +I+ Sbjct: 44 SGFSPAEIARFAHGVREQNVDRGCVVFHKGDPCHGFHLVLAGQVKLAFTSAEGHEKVIEI 103 Query: 64 FAAPCFIGEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKN 123 GE + QA+ +C L + + D +F RK+ LSH+ Sbjct: 104 ILPGQTFGEAVMFMDKPYVVMAQALTDCKLLHISKSVVFDEMDRDPVFCRKIIAGLSHRL 163 Query: 124 YRNIVSLTQNQSFPLVNRLAAFILLSQEGD-----------LYHEKHTQAAEYLGVSYRH 172 + I + R+ ++L +E D A L ++ H Sbjct: 164 HHLIADVETYSLRSGRERIVGYLLRQEEIDGEPRTNGYVSVRLPTSKGTIASRLNLTQEH 223 Query: 173 LLYVLAQFIHDGLLIKSKKGYLIKNRKQLS 202 +L + I GL+ + I + ++L Sbjct: 224 FSRILHELIEAGLICVEGRTIHIPDIEKLR 253 >UniRef50_B7GKB9 Transcriptional regulator, Crp family n=13 Tax=Bacillaceae RepID=B7GKB9_ANOFW Length = 241 Score = 190 bits (484), Expect = 3e-47, Method: Composition-based stats. Identities = 32/210 (15%), Positives = 68/210 (32%), Gaps = 10/210 (4%) Query: 4 SAFKDCFLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDF 63 S D L + + + + +G Q +F++ RG ++Y T +G+ ++ Sbjct: 30 SQLSDEELNAIVHIATVRTCKPKTLVFMQGDQLDRVFFIVRGTVKIYKTDVSGKEQIVSI 89 Query: 64 FAAPCFIGEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKN 123 + P + + E + +PM+ + L+ KL + K Sbjct: 90 LHEGEMFPHTGFFRRGTYPAHAEIMNETTLIVIPMEQFEQTLMCYPQLCIKLFRIMGEKI 149 Query: 124 YRNIVSLTQNQSFPLVNRLAAFILLSQEGDLY----------HEKHTQAAEYLGVSYRHL 173 L + +LA + + + A +G + + Sbjct: 150 IELQTRLEELVFHNTAEQLARLFIRLAKTSGVYVKGRYRLKATLTTRELANMIGTARETV 209 Query: 174 LYVLAQFIHDGLLIKSKKGYLIKNRKQLSG 203 VL+Q G++ GY I + + L Sbjct: 210 SRVLSQMKQQGVVTTDDDGYYIIDVEALQQ 239 >UniRef50_B0TI91 Transcriptional regulator, crp/fnr family, putative n=1 Tax=Heliobacterium modesticaldum Ice1 RepID=B0TI91_HELMI Length = 235 Score = 190 bits (483), Expect = 3e-47, Method: Composition-based stats. Identities = 33/216 (15%), Positives = 78/216 (36%), Gaps = 10/216 (4%) Query: 4 SAFKDCFLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDF 63 ++ + L +++ R ++QEG+ +++L G+ RL +G+ ++ Sbjct: 20 ASLPEGVLRELANQVGERVLKRRQPLLQEGEPADAVYFLHEGKVRLAKMNPDGQEKVLSI 79 Query: 64 FAAPCFIGEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKN 123 GEI D P + +E LP+K +R L+ + + + Sbjct: 80 VDPGDIFGEIVAFDPGPSPYTAETMEPARVSRLPLKEFRQLVSDHPSLAAACLQVEARRL 139 Query: 124 YRNIVSLTQNQSFPLVNRLAAFILLSQEG----------DLYHEKHTQAAEYLGVSYRHL 173 + + R+AA + ++ + A+ +G S + Sbjct: 140 RQAYRHMKNLALLDTHGRVAARLFKLAHDYGVPDSRGTRIDFNLTRQELAQIVGTSRETV 199 Query: 174 LYVLAQFIHDGLLIKSKKGYLIKNRKQLSGLALEMD 209 +LA++ +L ++ +I + ++L A Sbjct: 200 SRILAEYERLKILEVERQQIVICDLEELKLRATGGR 235 >UniRef50_A7NPI1 Transcriptional regulator, Crp/Fnr family n=1 Tax=Roseiflexus castenholzii DSM 13941 RepID=A7NPI1_ROSCS Length = 223 Score = 189 bits (482), Expect = 5e-47, Method: Composition-based stats. Identities = 37/207 (17%), Positives = 65/207 (31%), Gaps = 4/207 (1%) Query: 4 SAFKDCFLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDF 63 + + +++ A + + G L+ L GR RL GR +I Sbjct: 15 ADLPEPDCAALASIAVRVRHTAGEMLFLAGDPSPGLYVLLSGRVRLSRLSPGGREQVIHI 74 Query: 64 FAAPCFIGEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKN 123 + + D P A + L P R L+L + +L Sbjct: 75 VEPGHHFNSVPVFDGGPCPVNAAAQTDIIALLFPGDRLRALILEHPVVALRLLADSCGYL 134 Query: 124 YRNIVSLTQNQSFPLVNRLAAFILLSQE----GDLYHEKHTQAAEYLGVSYRHLLYVLAQ 179 R + + + RLA +L E G + ++ A LG + L Sbjct: 135 RRLVDLVDDLALTTVQGRLARLLLTQAEAGERGVVQPLTQSEIAARLGTVREMVGRSLKT 194 Query: 180 FIHDGLLIKSKKGYLIKNRKQLSGLAL 206 F GL+ + +I +R L + Sbjct: 195 FEAMGLIRIERGTIIIIDRAALERESE 221 >UniRef50_A7VNU9 Putative uncharacterized protein n=1 Tax=Clostridium leptum DSM 753 RepID=A7VNU9_9CLOT Length = 229 Score = 189 bits (481), Expect = 6e-47, Method: Composition-based stats. Identities = 28/198 (14%), Positives = 64/198 (32%), Gaps = 6/198 (3%) Query: 15 SADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDFFAAPCFIGEIE 74 + + + I + +Q + + +GR +++ + NG I +GE Sbjct: 33 AKNLPTRTYEKDQMIYWQEEQADCFYCIKKGRVKVFLSSENGMEKTITIVEQG-ILGEAA 91 Query: 75 LIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKNYRNIVSLTQNQ 134 D + +A+ + +A+ D L ++H+ + Sbjct: 92 FFDHMPRVSSAKALVKTELIAINRNGLIKSFSQDPDLAVHLLELMAHRVRLLSEQVDNMT 151 Query: 135 SFPLVNRLAAFILLSQEGDL-----YHEKHTQAAEYLGVSYRHLLYVLAQFIHDGLLIKS 189 R+A +L + H + A G + + +L +F +G + Sbjct: 152 FLQADQRVAQALLRHAVPGEDGILQVNLTHEEIANLAGTTRVTVSKLLTRFAKNGWIGTR 211 Query: 190 KKGYLIKNRKQLSGLALE 207 + +KN L + E Sbjct: 212 YRAVALKNPAALRSFSKE 229 >UniRef50_B3QJQ9 Transcriptional regulator, Crp/Fnr family n=2 Tax=Rhodopseudomonas palustris RepID=B3QJQ9_RHOPT Length = 236 Score = 189 bits (481), Expect = 6e-47, Method: Composition-based stats. Identities = 38/210 (18%), Positives = 74/210 (35%), Gaps = 6/210 (2%) Query: 4 SAFKDCFLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDF 63 L + RL F + + +G + LF + G R+ + +GR ++++ Sbjct: 26 QDLAPEALDQLCRAARLVRFSRGETVFLKGDDANALFVVVEGAIRVSSGSTDGRTAMLNL 85 Query: 64 FAAPCFIGEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKN 123 + GE+ ++D A + L++ + L+ + KL V L + Sbjct: 86 IGSGEVFGEVAVLDGLPRTTDAIAHSDSVLLSIARRDLFELIDTQPQLMMKLIVLLCGRV 145 Query: 124 YRNIVSLTQNQSFPLVNRLAAFILLSQEGDL------YHEKHTQAAEYLGVSYRHLLYVL 177 + + RLA I+ E D Q +E G+S + +L Sbjct: 146 RATSQQVEWLMLQSMSARLAGTIMRLAERDTDRAPLRLQLTQQQVSEMAGMSRESVNKLL 205 Query: 178 AQFIHDGLLIKSKKGYLIKNRKQLSGLALE 207 A++ G + + I L +A E Sbjct: 206 ARWASQGWIRLGPQTLEIFQPDALRAVAGE 235 >UniRef50_B0ABB5 Putative uncharacterized protein n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0ABB5_9CLOT Length = 238 Score = 188 bits (480), Expect = 8e-47, Method: Composition-based stats. Identities = 66/210 (31%), Positives = 115/210 (54%), Gaps = 2/210 (0%) Query: 1 MSESAFKDCFLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSL 60 +++ + F +D+ + HF ++I G++ +L+ G++++Y T NG+ L Sbjct: 27 INKYNINEIFSSDIYPYMEIHHFKKNEHICLSGEELKYLYLFVEGKSKVYITTPNGKSLL 86 Query: 61 IDFFAAPCFIGEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLS 120 + F++ +GEIEL++K +QAI +C C+A+P K L D+ FL + L+ Sbjct: 87 VRFYSPVQIVGEIELLNKIEFQCNIQAIRDCICIAVPRKIIEEKYLKDSKFLHYISTHLA 146 Query: 121 HKNYRNIVSLTQNQSFPLVNRLAAFILL--SQEGDLYHEKHTQAAEYLGVSYRHLLYVLA 178 K VS + N +PL NRLA++IL + E E TQ AE+LG SYRHLL V+ Sbjct: 147 LKLASLSVSNSVNILYPLENRLASYILASYTSEDSNNTENLTQIAEFLGTSYRHLLRVVK 206 Query: 179 QFIHDGLLIKSKKGYLIKNRKQLSGLALEM 208 +F + ++ + K +I ++ +L LA ++ Sbjct: 207 EFELEKIIKRDNKKLVILDKDKLEDLAGDL 236 >UniRef50_Q3JC77 Transcriptional regulatory protein, Crp family n=6 Tax=Gammaproteobacteria RepID=Q3JC77_NITOC Length = 214 Score = 188 bits (479), Expect = 1e-46, Method: Composition-based stats. Identities = 33/200 (16%), Positives = 73/200 (36%), Gaps = 6/200 (3%) Query: 5 AFKDCFLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDFF 64 AF L + + ++ EG L+ + G+ ++Y + G+ ++ Sbjct: 10 AFSPEDLELLRGCGVTRTYPKYTILIHEGDLSDSLYIILSGKVKVYISDEGGKEVILRTQ 69 Query: 65 AAPCFIGEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKNY 124 A + GE+ L+DK +V +++ + + L F KL L+ + Sbjct: 70 KAGEYFGELALLDKGPRSASVMTLDKSRLSVVSKTIFNRCLTEHPDFALKLLCALTQRVR 129 Query: 125 RNIVSLTQNQSFPLVNRLAAFILLSQ--EGDLY----HEKHTQAAEYLGVSYRHLLYVLA 178 ++ + R+A +L +G H + A+ +G S + ++ Sbjct: 130 SLTENVKNLALLDVYGRVARTLLDLAIEKGGKLIIEERPTHQEIAQRVGASREMVSRIMG 189 Query: 179 QFIHDGLLIKSKKGYLIKNR 198 G + + K +I +R Sbjct: 190 DLATGGYIEVTSKTIIIPHR 209 >UniRef50_C4XN52 Crp family transcriptional regulator n=2 Tax=Desulfovibrio RepID=C4XN52_DESMR Length = 251 Score = 188 bits (478), Expect = 2e-46, Method: Composition-based stats. Identities = 40/219 (18%), Positives = 74/219 (33%), Gaps = 8/219 (3%) Query: 5 AFKDCFLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDFF 64 + L ++A + + I + + GRA+LY +GR + Sbjct: 18 GMPEERLARMAAGAVVSRHGPGELIAARSDAGEAFYLVASGRAKLYQIGPDGREQTLYIL 77 Query: 65 AAPCFIGEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKNY 124 L+D P A+E+ LA P + D L L + + Sbjct: 78 GPGEPFCLCSLVDDGEFPAFAAALEDTRVLAFPARTLAAAAREDPEVLFDLLRLMCRRLK 137 Query: 125 RNIVSLTQNQSFPLVNRLAAFILLSQEGD------LYHEKHTQAAEYLGVSYRHLLYVLA 178 + + PL RLA F+L + H + A+ +G + L Sbjct: 138 QTQAMVESLALLPLTGRLAGFLLHEADRSPGTGPVRLAISHRELAKIVGATPEALSRAFR 197 Query: 179 QFIHDGLLIKSKKGYLIKNRKQLSGLA--LEMDPENKFS 215 + GL+ + + + +R L+ A E++ E K + Sbjct: 198 KLAEAGLVTVTGRDVALHDRPALAAEAGRAEVEEEEKSA 236 >UniRef50_A3I0Z6 Putative FNR-family transcriptional regulator protein n=1 Tax=Algoriphagus sp. PR1 RepID=A3I0Z6_9SPHI Length = 218 Score = 187 bits (477), Expect = 2e-46, Method: Composition-based stats. Identities = 41/213 (19%), Positives = 90/213 (42%), Gaps = 10/213 (4%) Query: 4 SAFKDCFLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDF 63 S + + ++S + L + EG +P +F + G ++Y T +NG+ ++ Sbjct: 3 SDLPEQHVCNISENKNLISHRKGQILYYEGTKPLGIFCINSGVVKVYKTASNGKEQILHL 62 Query: 64 FAAPCFIGEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKN 123 F+G L+ +++ + +E+ +P + + L N+T F +++ LSH+ Sbjct: 63 AKEGDFLGYSALLGEENYSNSAMIVEDAKICFIPKETFLATLFNNTPFFKRITKALSHEL 122 Query: 124 YRNIVSLTQNQSFPLVNRLAAFILLSQ----------EGDLYHEKHTQAAEYLGVSYRHL 173 LT + RLA IL + + A +G + + Sbjct: 123 GIMEEKLTDATQKSIRERLAFVILQLASSYGVDGGETQKIDLVLSREEIAGMVGTATESV 182 Query: 174 LYVLAQFIHDGLLIKSKKGYLIKNRKQLSGLAL 206 + +L++F D L+ K ++K+++ L+ L+ Sbjct: 183 IRLLSEFKKDNLIELEGKRIIVKDKRGLARLSD 215 >UniRef50_A1SH69 Cyclic nucleotide-binding n=1 Tax=Nocardioides sp. JS614 RepID=A1SH69_NOCSJ Length = 267 Score = 187 bits (477), Expect = 2e-46, Method: Composition-based stats. Identities = 36/212 (16%), Positives = 69/212 (32%), Gaps = 9/212 (4%) Query: 5 AFKDCFLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDFF 64 D + ++ + + + Q LF L +GR R++ +GR Sbjct: 56 DLDDTEMDALAQAAPMRAYATGALVYTPHQPLETLFILKKGRIRIFRVSPDGRALTTAII 115 Query: 65 AAPCFIGEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKNY 124 GE+ ++ + +A+++ + R LLL D ++ TL + Sbjct: 116 DPGTIFGEMVIVGQQMHDSFAEALDDVVVCVMTKADVRRLLLGDPRISARISETLGRRIG 175 Query: 125 RNIVSLTQNQSFPLVNRLAAFILLSQ---------EGDLYHEKHTQAAEYLGVSYRHLLY 175 + + R+A ++ G H Q A S Sbjct: 176 ELEQKFSDAVFKSVPERIAGALVTLASATSGRPLGRGIQVRLTHEQLAALAATSRETTTK 235 Query: 176 VLAQFIHDGLLIKSKKGYLIKNRKQLSGLALE 207 +L GL+ + I NR++L L+ E Sbjct: 236 ILGDLADQGLITLGRGRITILNRERLRVLSGE 267 >UniRef50_C6P9N7 Transcriptional regulator, Crp/Fnr family n=1 Tax=Thermoanaerobacterium thermosaccharolyticum DSM 571 RepID=C6P9N7_CLOTS Length = 225 Score = 187 bits (476), Expect = 2e-46, Method: Composition-based stats. Identities = 29/210 (13%), Positives = 75/210 (35%), Gaps = 11/210 (5%) Query: 5 AFKDCFLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDFF 64 + L +S T+ + + I+ EG + ++ + +G+ ++Y +G+ ++ Sbjct: 15 DLNEEELRAISGMTKEGFYAKGNIIINEGDRIDNIYIIHKGKIKVYKINLDGKEQILYIL 74 Query: 65 AAPCFIGEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKNY 124 GE + + +A+++ L + + ++ + K+ L + Sbjct: 75 KDGDTFGENSIFKEQKATFYAEAMDDVKLCLLSKEDFMGIISRNPEIALKIMNYLLERLQ 134 Query: 125 RNIVSLTQNQSFPLVNRLAAFILLSQEGDLYH----------EKHTQAAEYLGVSYRHLL 174 + + + RL + IL + + A LG + + Sbjct: 135 NIESLVKDITTEDVKTRLLSMILKLADKEGIKSSDGIKLKLYLSREDIANLLGTTRETIS 194 Query: 175 YVLAQFIHDGLLI-KSKKGYLIKNRKQLSG 203 L + DG++ S K L+K+ ++ Sbjct: 195 RKLHELEDDGIIKFLSNKEILLKDIEKFKE 224 >UniRef50_Q07HN5 Transcriptional regulator, Crp/Fnr family n=1 Tax=Rhodopseudomonas palustris BisA53 RepID=Q07HN5_RHOP5 Length = 234 Score = 187 bits (476), Expect = 2e-46, Method: Composition-based stats. Identities = 36/205 (17%), Positives = 77/205 (37%), Gaps = 4/205 (1%) Query: 4 SAFKDCFLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDF 63 A ++A ++ I +G + LF + RG + T ++G+ ++ Sbjct: 26 QALGPEVCEQLAAHAKIKDVPRGTTIFMKGAAGTCLFAVCRGVVLVTNTSSDGKSLFLNE 85 Query: 64 FAAPCFIGEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKN 123 GEI L+D A +C + + + + PLL ++ + KL L + Sbjct: 86 IKEGEIFGEIALLDGQPRTADAAAFTDCSLIVIERRDFLPLLRSNPDVMLKLVEILCSRL 145 Query: 124 YRNIVSLTQNQSFPLVNRLAAFILLSQ----EGDLYHEKHTQAAEYLGVSYRHLLYVLAQ 179 R + L RLA +L + + ++ +G+S + L Sbjct: 146 RRTTEQVEDLMFMDLRGRLAKTLLRLSQSAGDDRTLDISQNELSQMVGLSREMINKQLQV 205 Query: 180 FIHDGLLIKSKKGYLIKNRKQLSGL 204 ++ +G L ++ +I + L+ + Sbjct: 206 WVREGYLKIERRRLIILQPQALADI 230 >UniRef50_C6XZK0 Response regulator receiver n=3 Tax=Bacteroidetes RepID=C6XZK0_PEDHD Length = 352 Score = 187 bits (475), Expect = 3e-46, Method: Composition-based stats. Identities = 33/202 (16%), Positives = 73/202 (36%), Gaps = 6/202 (2%) Query: 9 CFLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDFFAAPC 68 L + AD ++ + + I EG ++ + G+ + +GR L + A Sbjct: 149 AELQKMIADRKVRNVKKKQVIYYEGDAVQGIYLVLTGKVKTIKLSEDGRELLTGLYNAEE 208 Query: 69 FIGEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKNYRNIV 128 + G L+ + +A+E+ LP + LL ++ LS+ Sbjct: 209 YFGIPALLGHEPYAETAEALEDTTVCLLPKEMVEALLNKYPDVAKEFIRILSNNLRSKEE 268 Query: 129 SLTQNQSFPLVNRLAAFILLSQEGDL------YHEKHTQAAEYLGVSYRHLLYVLAQFIH 182 L Q + R+A ++ + + A G++ + +L+ F Sbjct: 269 QLLQLAYHSVRKRMAEVLIRLCKQEKSGAVLNLKISRDNLAAMAGMATETVSRILSDFRD 328 Query: 183 DGLLIKSKKGYLIKNRKQLSGL 204 +GL+ K ++ + +L + Sbjct: 329 EGLIEKKGSQIIVTDELKLQQM 350 >UniRef50_Q2SHS2 CAMP-binding protein-catabolite gene activator and regulatory subunit of cAMP-dependent protein kinase n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SHS2_HAHCH Length = 235 Score = 186 bits (474), Expect = 4e-46, Method: Composition-based stats. Identities = 47/214 (21%), Positives = 84/214 (39%), Gaps = 9/214 (4%) Query: 5 AFKDCFLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDFF 64 A + T++ ++ +++ Q G +P+ ++ + +G R+ NG+ +++ F Sbjct: 22 AIPEDLKTELLNLAQIKALRTGEFLFQRGDKPAGIYAVVKGSLRVAGVNENGKEAILAFV 81 Query: 65 AAPCFIGEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKNY 124 P + GEI L D+ + A L LP K LL F R V L K Sbjct: 82 EPPNWFGEIALFDRLDRTHSALAESPTTLLHLPQKGLETLLAAKPHFWRDFGVLLCFKLR 141 Query: 125 RNIVSLTQNQSFPLVNRLAAFILLSQEG---------DLYHEKHTQAAEYLGVSYRHLLY 175 ++ P RLA +++ EG + H + Q LGVS + + Sbjct: 142 LAFRAVEDATLLPAPLRLARRLVVMAEGYGDFSGQARRVIHIQQEQLGMMLGVSRQTVNQ 201 Query: 176 VLAQFIHDGLLIKSKKGYLIKNRKQLSGLALEMD 209 +L + GL+ S I + L A ++ Sbjct: 202 ILKELEQKGLIATSYGEIQILDMDALKSQAGMLE 235 >UniRef50_Q3SML3 Transcriptional Regulator, Crp/Fnr family n=1 Tax=Thiobacillus denitrificans ATCC 25259 RepID=Q3SML3_THIDA Length = 225 Score = 186 bits (474), Expect = 4e-46, Method: Composition-based stats. Identities = 33/208 (15%), Positives = 71/208 (34%), Gaps = 6/208 (2%) Query: 4 SAFKDCFLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDF 63 +A V A + + + +G + F++ G +L +G ++D Sbjct: 18 AALSPPEFDQVLAHASVRKLAPNECLFDQGDPCTHFFFVLSGIVKLCRVAPSGEEKVMDL 77 Query: 64 FAAPCFIGEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKN 123 + E + P +A++ +AL +H+ LL ++ +L T+S + Sbjct: 78 VRPGHYFAEAVMFMGGRYPVYARALDGTRLVALDNRHFLGLLGSNRDLCMRLLSTMSQRI 137 Query: 124 YRNIVSLTQNQSFPLVNRLAAFILLSQEGD------LYHEKHTQAAEYLGVSYRHLLYVL 177 + I + R+ ++L A LG+ L VL Sbjct: 138 HSLINEIDHLTLHSGAQRVIGYLLEQLPDGDAPGSVRLRVPKHVIASRLGIQPETLSRVL 197 Query: 178 AQFIHDGLLIKSKKGYLIKNRKQLSGLA 205 A+ L+ ++ + + L L+ Sbjct: 198 AKLRTGHLIDVHDDMIVLNDVEALRRLS 225 >UniRef50_A7NFZ8 Transcriptional regulator, Crp/Fnr family n=6 Tax=Chloroflexi (class) RepID=A7NFZ8_ROSCS Length = 218 Score = 186 bits (473), Expect = 5e-46, Method: Composition-based stats. Identities = 38/204 (18%), Positives = 73/204 (35%) Query: 4 SAFKDCFLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDF 63 +A D L D + + +YI EG++P+ ++++ RGR RL T +GR ++ Sbjct: 14 AALDDRALADAARLMESRTYRPGEYIAYEGERPAGVYFVQRGRVRLSRTAPDGREQVLAM 73 Query: 64 FAAPCFIGEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKN 123 A + + D +A+ CL LP L+ + ++ + Sbjct: 74 VGAGENFNAVAIFDSHGNLTTARAMSLVQCLILPGDALITLIRRHPDLALAMLREMAGQL 133 Query: 124 YRNIVSLTQNQSFPLVNRLAAFILLSQEGDLYHEKHTQAAEYLGVSYRHLLYVLAQFIHD 183 V + + RLA +L H + AE L Q + Sbjct: 134 RNLAVLVEDLAFRSVRERLARELLREAREGAAELTHQELAERTATVREIAGRALRQLAQE 193 Query: 184 GLLIKSKKGYLIKNRKQLSGLALE 207 GL+ + ++ + L+ + Sbjct: 194 GLVRLERGRVVVLDPDGLARIGDG 217 >UniRef50_C6A9A9 Transcriptional regulator n=20 Tax=Bifidobacteriaceae RepID=C6A9A9_BIFLB Length = 253 Score = 185 bits (472), Expect = 6e-46, Method: Composition-based stats. Identities = 31/215 (14%), Positives = 66/215 (30%), Gaps = 13/215 (6%) Query: 5 AFKDCFLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDFF 64 + ++ + +YI EG ++ + GR +L + RV L+ Sbjct: 38 QVSEEQARELVPYLHHEEYDKGEYIFTEGDTDQRMYVIQEGRVKLTRQSVDKRVQLLSIH 97 Query: 65 AAPCFIGEIELID--KDHEPRAVQAIEE-CWCLALPMKHYRPLLLNDTLFLRKLCVTLSH 121 +GEI + D A+ + + L L + L++ Sbjct: 98 TRGELLGEIPVFDPQGGPRTANAVAMVDGTQVVWLDHDALFAWLSKYPGVAVDMLQVLAN 157 Query: 122 KNYRNIVSLTQNQSFPLVNRLAAFILLSQEGD----------LYHEKHTQAAEYLGVSYR 171 + N + + RLA +L + + A+ +G S Sbjct: 158 RMRANNERIADLVFSDVPGRLAKTLLSLASRFGKPVEEGLQVPHDLTQEEMAQLVGSSRE 217 Query: 172 HLLYVLAQFIHDGLLIKSKKGYLIKNRKQLSGLAL 206 + L F + G + ++ + +I L + Sbjct: 218 TVNKALMDFANRGWIARNGRTIIIYQPGALIRRSQ 252 >UniRef50_C9RRN7 Transcriptional regulator, Crp/Fnr family n=1 Tax=Fibrobacter succinogenes subsp. succinogenes S85 RepID=C9RRN7_FIBSS Length = 236 Score = 185 bits (472), Expect = 7e-46, Method: Composition-based stats. Identities = 33/218 (15%), Positives = 77/218 (35%), Gaps = 16/218 (7%) Query: 4 SAFKDCFLTDVSADTRLFHFLARDYIVQEGQQP-SWLFYLTRGRARLYATLANGRVSLID 62 S + L ++ + ++ + +V EG L+ + G ++Y T +GR +++ Sbjct: 16 SELNEEQLGMIANLVIVKNYNRDETVVLEGDDSVQALYLIAMGSVQVYMTGIDGRETILS 75 Query: 63 FFAAPCFIGEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHK 122 F F GE+ LID + +V+ + + L + + + L+ L L + Sbjct: 76 FLERGDFFGEMSLIDGEPRSASVRTVTDAKLLVIHRESFLSLIRKTPEIAMALMSELCKR 135 Query: 123 NYRNIVSLTQNQSFPLVNRLAAFILLSQEGDLYHE---------------KHTQAAEYLG 167 + + + + R+A +L + Q A+ G Sbjct: 136 LRKANKQIGSLSTMSVSGRVAGTLLNLMQERGVRIHTDNGNMVTVIHNRPTQQQLADMSG 195 Query: 168 VSYRHLLYVLAQFIHDGLLIKSKKGYLIKNRKQLSGLA 205 + + + + + + + K +I + L A Sbjct: 196 TTRETVSRICSLLVKTNAIAMTGKDIVIFDEDMLQEKA 233 >UniRef50_C1XIJ9 cAMP-binding protein n=2 Tax=Meiothermus RepID=C1XIJ9_MEIRU Length = 225 Score = 184 bits (469), Expect = 1e-45, Method: Composition-based stats. Identities = 34/211 (16%), Positives = 67/211 (31%), Gaps = 5/211 (2%) Query: 4 SAFKDCFLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDF 63 + ++ A I + G + L+ + G+ R+Y T +GR + + Sbjct: 15 QGVPPQAIEVAREAFVTRNYPAGKLIFEAGDMGAALYIVQSGQVRIYRTYLDGRERMFAY 74 Query: 64 FAAPCFIGEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKN 123 GE+ L+D + + + L L Y L+ L L L+ + Sbjct: 75 LGPGEVFGEMSLLDDQPRSASAETTVDSVLLVLYQDAYWSLVRKWPEILHNLATILARRL 134 Query: 124 YRNIVSLTQNQSFPLVNRLAAFILLSQ-----EGDLYHEKHTQAAEYLGVSYRHLLYVLA 178 + L R+A + + +G H + A+ G S + VL Sbjct: 135 READLELEVLSFEEARGRVAYALTKLRKQRYGDGLKMKLTHQELAQLSGTSRETVTRVLH 194 Query: 179 QFIHDGLLIKSKKGYLIKNRKQLSGLALEMD 209 + L+ I + L + + Sbjct: 195 ALREEELVKVGSGYVEILDPAGLEEVLFGLR 225 >UniRef50_B5YHX8 Transcriptional regulator, putative n=1 Tax=Thermodesulfovibrio yellowstonii DSM 11347 RepID=B5YHX8_THEYD Length = 222 Score = 184 bits (469), Expect = 2e-45, Method: Composition-based stats. Identities = 36/211 (17%), Positives = 84/211 (39%), Gaps = 10/211 (4%) Query: 4 SAFKDCFLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDF 63 + + + + +++ F R+ I EG P W L +G+ ++ NG+ +++ Sbjct: 9 QILNENDIKTLEKNLKVYKFKKRETIFNEGDIPQWFHVLIKGKIKISKFSNNGKEIILEL 68 Query: 64 FAAPCFIGEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKN 123 AP F G + L+ P + AI++C +P K + ++ ++ ++ + Sbjct: 69 LDAPDFFGTLALLKNIPYPASAIAIDDCDIGNIPSKTFLQIVNKYPELQSEILHHVTMRL 128 Query: 124 YRNIVSLTQNQSFPLVNRLAAFILLSQEG----------DLYHEKHTQAAEYLGVSYRHL 173 I SL +++R+ IL + AE G + Sbjct: 129 KSGIESLKNIALVDVLSRIVYQILKLANKYGKKVSEGILIDLKLTKQEIAEMSGTTTETA 188 Query: 174 LYVLAQFIHDGLLIKSKKGYLIKNRKQLSGL 204 + ++++ +G + + + +IK+ + L L Sbjct: 189 IRIMSKLKKEGYITEQNRKIIIKDIEMLLNL 219 >UniRef50_B8ID71 Transcriptional regulator, Crp/Fnr family n=11 Tax=Rhizobiales RepID=B8ID71_METNO Length = 230 Score = 184 bits (469), Expect = 2e-45, Method: Composition-based stats. Identities = 34/205 (16%), Positives = 67/205 (32%), Gaps = 2/205 (0%) Query: 4 SAFKDCFLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDF 63 + D L V+ ++ + Q+ L+ + RG R+ A GR ++ Sbjct: 20 AGLGDPALQAVARLCVTRSLAPQEVLFQKNDPADALYAVRRGEIRIATGTAEGRQLTLNL 79 Query: 64 FAAPCFIGEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKN 123 GE+ L+D A E + + LL L L + Sbjct: 80 LGPGDVFGEVALLDGHPRTADAVATEPTELFVIRRRDLLDLLSQQPEVAIALIELLCKRV 139 Query: 124 YRNIVSLTQNQSFPLVNRLAAFILLSQE--GDLYHEKHTQAAEYLGVSYRHLLYVLAQFI 181 + + P+ RLA + + G+ + A + S + L + Sbjct: 140 RWMSERMEETNFLPVPARLARRLAALADDYGNEIQATQEELAVFANTSRETVNRQLQAWK 199 Query: 182 HDGLLIKSKKGYLIKNRKQLSGLAL 206 DG++ ++ + +R L +A Sbjct: 200 RDGIVQLARGRIRLLDRPALDVIAD 224 >UniRef50_A8MIN6 Transcriptional regulator, Crp/Fnr family n=3 Tax=Clostridiales RepID=A8MIN6_ALKOO Length = 229 Score = 184 bits (468), Expect = 2e-45, Method: Composition-based stats. Identities = 36/210 (17%), Positives = 74/210 (35%), Gaps = 10/210 (4%) Query: 6 FKDCFLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDFFA 65 D L +++ T + I EG + +++ G+ ++Y T +GR + + Sbjct: 19 LSDEDLEKINSITIEKNLRKGTIIFMEGDKGEAFYFIKSGKIKIYKTTPDGRELIFAILS 78 Query: 66 APCFIGEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKNYR 125 E+ L + P + +E+ + + L+ + + S K Y Sbjct: 79 HGDVFAEVALFNDVAYPAGAEVLEDACIGTIRNEDLEELIRKNAEIALHIIKEFSKKLYN 138 Query: 126 NIVSLTQNQSFPLVNRLAAFILLSQE----------GDLYHEKHTQAAEYLGVSYRHLLY 175 + + + R A IL + + A +G + + Sbjct: 139 SQQKVKELALGDTYARTAQTILKLAKSNGKETSEGIEIHLDISRQELANLIGTARETVSR 198 Query: 176 VLAQFIHDGLLIKSKKGYLIKNRKQLSGLA 205 L+QF +G + KK +IK+ +LS A Sbjct: 199 ALSQFKKEGSIHIDKKKIIIKDLNKLSEWA 228 >UniRef50_B2TMB7 Crp-family transcriptional regulator n=44 Tax=Firmicutes RepID=B2TMB7_CLOBB Length = 237 Score = 184 bits (468), Expect = 2e-45, Method: Composition-based stats. Identities = 32/210 (15%), Positives = 75/210 (35%), Gaps = 11/210 (5%) Query: 5 AFKDCFLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDFF 64 + L ++ + D I EG + L+++ +G+ +LY +G+ ++ Sbjct: 26 NLNNEELIEIVKTINHKEYNKGDIIFTEGSTANTLYFINKGKIKLYKYTKDGKEQILHIL 85 Query: 65 AAPCFIGEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKNY 124 + GE+ LI ++I L + +++ + K+ T+ + Sbjct: 86 SEGDLFGELNLIKPSEYGFNSKSIVNSKICTLTKDEMKDIIMRNPEIGIKVLETVGERLG 145 Query: 125 RNIVSLTQNQSFPLVNRLAAFILLSQEG----------DLYHEKHTQAAEYLGVSYRHLL 174 + + + + +R+A ++ E A Y+GV+ + Sbjct: 146 KVESLVQNLATNDVDSRMAYLLIDLMERYGETIENNISIKLSLSREDMANYIGVTRETIS 205 Query: 175 YVLAQFIHDGLLIKSK-KGYLIKNRKQLSG 203 L +F + L+ K +I + K L Sbjct: 206 RKLKKFEDEKLIKIVGTKNIIILDEKGLKD 235 >UniRef50_A0RLJ1 Cyclic nucleotide-binding domain protein n=37 Tax=Bacillus cereus group RepID=A0RLJ1_BACAH Length = 223 Score = 184 bits (468), Expect = 2e-45, Method: Composition-based stats. Identities = 95/209 (45%), Positives = 125/209 (59%) Query: 1 MSESAFKDCFLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSL 60 + F F D+ L F ++ I +EG +L+YL G+A++Y + NGRVSL Sbjct: 14 IQTYNFHTFFSFDILPYAELHSFQKKERICREGVDVPYLYYLISGKAKIYMSHKNGRVSL 73 Query: 61 IDFFAAPCFIGEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLS 120 I+F AP FIGE+ LI + + V+ IEEC CL LP+K R LLL D FL+KLC + Sbjct: 74 INFIQAPSFIGELGLIGVESVTKTVEVIEECMCLVLPLKDCRHLLLQDATFLQKLCKFIG 133 Query: 121 HKNYRNIVSLTQNQSFPLVNRLAAFILLSQEGDLYHEKHTQAAEYLGVSYRHLLYVLAQF 180 K S +N S+P NRLAAFILL+++ + Y EKHT+A+EYL VSYRHLLYVL QF Sbjct: 134 EKTITRTESYAKNNSYPFENRLAAFILLTEQNNSYTEKHTEASEYLNVSYRHLLYVLNQF 193 Query: 181 IHDGLLIKSKKGYLIKNRKQLSGLALEMD 209 L K + Y I +R QL LA E+ Sbjct: 194 CQQHYLKKDGRTYYIHDRIQLEKLADELK 222 >UniRef50_O05689 Catabolite gene activator n=9 Tax=Gammaproteobacteria RepID=CRP_PASMU Length = 209 Score = 184 bits (468), Expect = 2e-45, Method: Composition-based stats. Identities = 30/205 (14%), Positives = 72/205 (35%), Gaps = 10/205 (4%) Query: 1 MSESAFKDCFLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSL 60 M + D L + + + ++ ++ G++ L+YL +G + +G+ + Sbjct: 1 MQTTPSIDPTLEWFLSHCHIHKYPSKSTLIHAGEKAETLYYLIKGSVAVLVKDEDGKEMI 60 Query: 61 IDFFAAPCFIGEIELI-DKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTL 119 + + + F GE L + ++A C + K +R L+ + L L L Sbjct: 61 LTYLSQGDFFGEAGLFEEGQLRSAWIKAKSPCEIAEISYKKFRQLIQVNPDILMHLSAQL 120 Query: 120 SHKNYRNIVSLTQNQSFPLVNRLAAFILLSQ---------EGDLYHEKHTQAAEYLGVSY 170 + + ++ + R+A +L +G + + +G S Sbjct: 121 ARRLQNTSRQVSNLAFLDVTGRIAQTLLNLAKMPEAMTHPDGMQIKITRQEIGQMVGCSR 180 Query: 171 RHLLYVLAQFIHDGLLIKSKKGYLI 195 + +L L+ K ++ Sbjct: 181 ETVGRILKMLEDQHLISAHGKTIVV 205 >UniRef50_Q814L9 Catabolite gene activator n=33 Tax=Bacillus RepID=Q814L9_BACCR Length = 223 Score = 184 bits (468), Expect = 2e-45, Method: Composition-based stats. Identities = 89/209 (42%), Positives = 125/209 (59%) Query: 1 MSESAFKDCFLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSL 60 M F F V L F ++ I EG +L+YL G+A++Y + NG+VSL Sbjct: 14 MQIHQFHTLFSFHVLPYVELHSFQTKEMICSEGNTLPYLYYLISGKAKIYMSHKNGKVSL 73 Query: 61 IDFFAAPCFIGEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLS 120 I+F AP FIGE+ LI ++ ++V+ +E+C CLALP+K + LLL D FL+ LC + Sbjct: 74 INFIQAPSFIGELGLIGVENITKSVEVLEDCVCLALPLKDCQQLLLQDATFLQHLCKFIG 133 Query: 121 HKNYRNIVSLTQNQSFPLVNRLAAFILLSQEGDLYHEKHTQAAEYLGVSYRHLLYVLAQF 180 K + +N S+P NRLAAFILL+++ + Y EKHT+A+EYL VSYRHLLYVL +F Sbjct: 134 EKTITRTENYAKNYSYPFENRLAAFILLTEQNNCYIEKHTEASEYLNVSYRHLLYVLNRF 193 Query: 181 IHDGLLIKSKKGYLIKNRKQLSGLALEMD 209 L K + Y I++R L LA E+ Sbjct: 194 CQQNYLRKEGRTYYIQDRNTLEKLADELK 222 >UniRef50_B5EPN3 Transcriptional regulator, Crp/Fnr family n=6 Tax=Acidithiobacillus RepID=B5EPN3_ACIF5 Length = 246 Score = 183 bits (467), Expect = 2e-45, Method: Composition-based stats. Identities = 40/210 (19%), Positives = 75/210 (35%), Gaps = 6/210 (2%) Query: 4 SAFKDCFLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDF 63 SA+ + + + A ++ + + + EG ++L GR L A A G+ +++ Sbjct: 36 SAWPNDMIAPLLAQSQPLTLESGEILFAEGSPARSFYFLAVGRINLIAAAATGQEKIVEI 95 Query: 64 FAAPCFIGEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKN 123 E P QA L +P+ + L L +R++ LS + Sbjct: 96 IQPDDLFAEAVAFLGGRYPVTAQADATTTVLEIPLDLFVATLEQRPLLMRQMLARLSMRL 155 Query: 124 YRNIVSLTQNQSFPLVNRLAAFILLSQE------GDLYHEKHTQAAEYLGVSYRHLLYVL 177 + + L RLA+++L K A LG++ L VL Sbjct: 156 HFLVKELRHLSVESAEQRLASYLLELCPVVNSPAAIELPAKKAAVAARLGLTPETLSRVL 215 Query: 178 AQFIHDGLLIKSKKGYLIKNRKQLSGLALE 207 ++ GL+ ++ I + L A Sbjct: 216 SRMRKAGLIEVEQRTISIPDPLALRRWAGG 245 >UniRef50_C6IXS0 Transcription regulator n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6IXS0_9BACL Length = 236 Score = 183 bits (466), Expect = 3e-45, Method: Composition-based stats. Identities = 39/211 (18%), Positives = 72/211 (34%), Gaps = 7/211 (3%) Query: 4 SAFKDCFLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDF 63 + + + + + R F + I +EG + LF ++RG +L NG+ LI Sbjct: 25 AQLRQTEVELLHSVMRTSQFHKGEIIFREGDRSDSLFVVSRGIIKLTKLEDNGKEHLIRL 84 Query: 64 FAAPCFIGEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKN 123 F G+ L+ + + A + + + +L D + LS + Sbjct: 85 LFPGDFFGQFSLLQEKPHYASAIAADTTGICRIHRSDFLDILRRDPDTAARFMTALSAQL 144 Query: 124 YRNIVSLTQNQSFPLVNRLAAFILL-------SQEGDLYHEKHTQAAEYLGVSYRHLLYV 176 RLA +L + A +G + L Sbjct: 145 EEADAWAAVLTLLEADRRLAKMLLYFRRKAAPNSREFTLPVSKKDLASLIGATPETLSRK 204 Query: 177 LAQFIHDGLLIKSKKGYLIKNRKQLSGLALE 207 L Q +G+L +++ LI++ L LA E Sbjct: 205 LRQLSDEGVLTVTRRQLLIRDEAALCHLAGE 235 >UniRef50_Q5P0W6 Transcriptional regulator, Dnr/Nnr type n=2 Tax=Rhodocyclaceae RepID=Q5P0W6_AZOSE Length = 229 Score = 183 bits (466), Expect = 3e-45, Method: Composition-based stats. Identities = 31/207 (14%), Positives = 67/207 (32%), Gaps = 8/207 (3%) Query: 4 SAFKDCFLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDF 63 S + V+ TR + + Q G F++ G+ +L + A G +++ Sbjct: 19 SELSADDIDRVARYTRERTLEKGEVLFQRGDPVHGFFFVVSGQMKLAVSSAQGNEKVVEI 78 Query: 64 FAAPCFIGEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKN 123 + GE + P + + L + L+ D+ F RKL ++ + Sbjct: 79 ISPMNSFGEAVMFLNRPYPVFAEGLVATRLLHIGQAVVSDLIDQDSSFARKLLAGMAIRL 138 Query: 124 YRNIVSLTQNQSFPLVNRLAAFILLS--------QEGDLYHEKHTQAAEYLGVSYRHLLY 175 + I + R+ ++L A L ++ L Sbjct: 139 HSMIQDVEIYSLRSSTQRVIGYLLQQVEQDGATGARDIQLPTSKQVIASRLNLTPETLSR 198 Query: 176 VLAQFIHDGLLIKSKKGYLIKNRKQLS 202 + ++ GL+ K + + L+ Sbjct: 199 IFHDLVNAGLITVHGKHIALHDPVGLA 225 >UniRef50_P0A2T7 Catabolite gene activator n=270 Tax=Gammaproteobacteria RepID=CRP_KLEAE Length = 210 Score = 183 bits (466), Expect = 4e-45, Method: Composition-based stats. Identities = 29/198 (14%), Positives = 71/198 (35%), Gaps = 10/198 (5%) Query: 8 DCFLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDFFAAP 67 D L + + + ++ ++ +G++ L+Y+ +G + G+ ++ + Sbjct: 9 DPTLEWFLSHCHIHKYPSKSTLIHQGEKAETLYYIVKGSVAVLIKDEEGKEMILSYLNQG 68 Query: 68 CFIGEIELI-DKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKNYRN 126 FIGE+ L + V+A C + K +R L+ + L +L ++ + Sbjct: 69 DFIGELGLFEEGQERSAWVRAKTACEVAEISYKKFRQLIQVNPDILMRLSSQMARRLQVT 128 Query: 127 IVSLTQNQSFPLVNRLAAFILLSQ---------EGDLYHEKHTQAAEYLGVSYRHLLYVL 177 + + R+A +L +G + + +G S + +L Sbjct: 129 SEKVGNLAFLDVTGRIAQTLLNLAKQPDAMTHPDGMQIKITRQEIGQIVGCSRETVGRIL 188 Query: 178 AQFIHDGLLIKSKKGYLI 195 L+ K ++ Sbjct: 189 KMLEDQNLISAHGKTIVV 206 >UniRef50_B7DNP2 Transcriptional regulator, Crp/Fnr family n=1 Tax=Alicyclobacillus acidocaldarius LAA1 RepID=B7DNP2_9BACL Length = 221 Score = 183 bits (466), Expect = 4e-45, Method: Composition-based stats. Identities = 33/208 (15%), Positives = 67/208 (32%), Gaps = 11/208 (5%) Query: 5 AFKDCFLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDFF 64 L V+ L + + I EG +++L RG ++ GR ++ Sbjct: 15 DLTPGELARVAELAVLRQYRRGETIFIEGTPRESVYFLVRGLVKVVKVDEEGREHVVAVL 74 Query: 65 AAPCFIGEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKNY 124 + P AIE+ A+ + + LL KL L+ + Sbjct: 75 GKGQMFPHVGFFQDLPYPGTASAIEQTTVYAISTRAFDALLRRHPPIALKLLRVLADRIV 134 Query: 125 RNIVSLTQNQSFPLVNRLAAFILLSQE----------GDLYHEKHTQAAEYLGVSYRHLL 174 + L + + R+ AF+ E H + A+ +G+ + Sbjct: 135 QLQAKLQELAVYDSRERVVAFLRHFAEEQGCVEPEGVRVHLPITHAEIAQMVGLRRESVN 194 Query: 175 YVLAQFIHDGLLIKSKKGYLIKNRKQLS 202 + Q +G + + ++I +L Sbjct: 195 RIWNQLRREGAIEGERDTWVIH-LDRLQ 221 >UniRef50_A1ZWX5 Transcriptional regulatory protein n=1 Tax=Microscilla marina ATCC 23134 RepID=A1ZWX5_9SPHI Length = 236 Score = 183 bits (466), Expect = 4e-45, Method: Composition-based stats. Identities = 35/211 (16%), Positives = 74/211 (35%), Gaps = 9/211 (4%) Query: 4 SAFKDCFLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDF 63 S L ++S+ + D I EG P LF + G+ +++ T G+ ++ Sbjct: 22 SNLDRDNLAEISSQKSCNLYRKGDVIFHEGNYPLGLFSIFSGKVKVFKTSETGKDHILRL 81 Query: 64 FAAPCFIGEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKN 123 A +G L+ + + +E+ +P + L + ++ L+ Sbjct: 82 AGAGEPLGYRSLVSGEKYEVSAAVLEDTRVCFIPKALFLNTLQGSSNLTGRVMEFLTKDL 141 Query: 124 YRNIVSLTQNQSFPLVNRLAAFILLS---------QEGDLYHEKHTQAAEYLGVSYRHLL 174 + + R+A IL+ + A +G + L+ Sbjct: 142 KLAESKIADLAQKTVKERVAETILMLKQFYGMESDHKTINVSLSREDLANLVGTATETLI 201 Query: 175 YVLAQFIHDGLLIKSKKGYLIKNRKQLSGLA 205 L++F + ++ K +I N K L +A Sbjct: 202 RSLSEFKKNEIIDLKGKKIIILNAKILEKIA 232 >UniRef50_Q65IZ1 Putative uncharacterized protein n=1 Tax=Bacillus licheniformis ATCC 14580 RepID=Q65IZ1_BACLD Length = 222 Score = 183 bits (466), Expect = 4e-45, Method: Composition-based stats. Identities = 30/211 (14%), Positives = 65/211 (30%), Gaps = 10/211 (4%) Query: 1 MSESAFKDCFLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSL 60 M S D + + R ++ EG++ +F++ G + + +G + Sbjct: 8 MIFSGLNDEEFKQIEQIAAKRTYQPRMFVFMEGEEREAVFFIKSGLVKAFKIDEDGNEQV 67 Query: 61 IDFFAAPCFIGEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLS 120 I + D P +A++E + + + + LL+ K+ + Sbjct: 68 ISILQNGDMFPHVGFFDLSPYPATAEAVQETELIVIRIADFNELLMKFPEMTIKVMQIMG 127 Query: 121 HKNYRNIVSLTQNQSFPLVNRLAAFILLSQEG----------DLYHEKHTQAAEYLGVSY 170 K + S + +RL ++ + A +G S Sbjct: 128 KKILDLQERIQGFISKDVQHRLTHVLMKLAAEHGIPQEKGVYISLPITNQDFANMVGTSR 187 Query: 171 RHLLYVLAQFIHDGLLIKSKKGYLIKNRKQL 201 + L + LL + G I + L Sbjct: 188 ETINRTLNELKKKNLLTADRSGIFIHDTDWL 218 >UniRef50_C0WNJ4 CRP/FNR family transcriptional regulator n=3 Tax=Lactobacillus RepID=C0WNJ4_LACBU Length = 228 Score = 183 bits (465), Expect = 4e-45, Method: Composition-based stats. Identities = 33/204 (16%), Positives = 67/204 (32%), Gaps = 5/204 (2%) Query: 6 FKDCFLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDFFA 65 V+ + I G Q L G+ +L +G+ L+ Sbjct: 24 LPLDEKKAVAGLVVQHQYPKGTIIYLAGDQVGHFMILEHGQVKLSQISESGKEQLLKVMQ 83 Query: 66 APCFIGEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKNYR 125 F GE L D A+ + + ++ LL + L T+S + Sbjct: 84 PGDFDGEAALFSHDQRNVTATALVDSNVCQIDQDAFQSLLKSSPQLAVNLLTTMSQQINN 143 Query: 126 NIVSLTQNQSFPLVNRLAAFILL-----SQEGDLYHEKHTQAAEYLGVSYRHLLYVLAQF 180 T + + + +LA ++L + K A ++G + + Q Sbjct: 144 LQEEKTVSSTSDVAGQLAKYLLETSASLHESSFKLPLKKKDIATFIGTTPETISRTFKQL 203 Query: 181 IHDGLLIKSKKGYLIKNRKQLSGL 204 I DG++ + I ++ +L+ + Sbjct: 204 IADGVIKMTASLVEIVDQDRLTDI 227 >UniRef50_Q0K2Z3 Transcriptional regulator, CRP-family n=3 Tax=Cupriavidus RepID=Q0K2Z3_RALEH Length = 234 Score = 183 bits (465), Expect = 5e-45, Method: Composition-based stats. Identities = 33/198 (16%), Positives = 67/198 (33%), Gaps = 2/198 (1%) Query: 11 LTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDFFAAPCFI 70 L V+ R F + I G P++ + GR R+ GR S+ + Sbjct: 36 LDAVANAARRLRFGDGEMIFARGDPPTYFCMVLSGRVRMSRVSTGGRESVYSVIGRGRWF 95 Query: 71 GEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKNYRNIVSL 130 GEI L+D A+ + L + + +L ++ + + + Sbjct: 96 GEISLLDGKPRTHDAFAVGNTELMVLSQRDFHRILAAHPEGMQLIVQQICARLRVAFDHA 155 Query: 131 TQNQSFPLVNRLAAFILLSQE--GDLYHEKHTQAAEYLGVSYRHLLYVLAQFIHDGLLIK 188 P+ R+AA +L + + + + S + + L + GL+ + Sbjct: 156 QSAAQAPIDARMAARLLELADRTDHVVRISAEDLGDMVNRSRQTVAKYLQAWEDAGLIRR 215 Query: 189 SKKGYLIKNRKQLSGLAL 206 + + + L LA Sbjct: 216 EYRQIELLDPAALKRLAR 233 >UniRef50_C6WVL6 Transcriptional regulator, Crp/Fnr family n=1 Tax=Methylotenera mobilis JLW8 RepID=C6WVL6_METML Length = 227 Score = 182 bits (464), Expect = 6e-45, Method: Composition-based stats. Identities = 39/203 (19%), Positives = 76/203 (37%), Gaps = 6/203 (2%) Query: 6 FKDCFLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDFFA 65 +T ++ ++L + + G+ L+ L +G+ +L T G +I + Sbjct: 19 LSAEQITSIAEHSQLIDYPKGTSVFNRGEAAVGLYILLKGQLKLGVTSPQGSEKIISIVS 78 Query: 66 APCFIGEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKNYR 125 GE L + P QA + L +P +L NDT+F RK+ LS + ++ Sbjct: 79 PGDSFGEAILFLERQFPVYAQATLDSQVLLVPKSLIFSMLDNDTMFARKMLAGLSVRMHQ 138 Query: 126 NIVSLTQNQSFPLVNRLAAFILLSQ------EGDLYHEKHTQAAEYLGVSYRHLLYVLAQ 179 + + R ++L + A L ++ L +A+ Sbjct: 139 LVQDIEMLSLQSCTQRFIGYLLQISADATDASNITLPASKSTIASLLNLTPETLSRTMAK 198 Query: 180 FIHDGLLIKSKKGYLIKNRKQLS 202 GL+ + K +I + K+L Sbjct: 199 LQQLGLIEVNGKDVMIIDVKKLR 221 >UniRef50_A3DJ45 Transcriptional regulator, Crp/Fnr family n=3 Tax=Clostridium thermocellum RepID=A3DJ45_CLOTH Length = 232 Score = 182 bits (464), Expect = 6e-45, Method: Composition-based stats. Identities = 35/209 (16%), Positives = 70/209 (33%), Gaps = 11/209 (5%) Query: 4 SAFKDCFLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDF 63 S + V + + IV EG L + G+ + + G+ ++ Sbjct: 24 STLNSEEINKVVNLIIRKRYSRGEMIVLEGSHLDRLIIINSGKVKAFRNTFEGKEQILYI 83 Query: 64 FAAPCFIGEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKN 123 F+ F GE L+ V+A+EE + ++ LL K+ L ++ Sbjct: 84 FSQGDFFGEKNLLINQTAQYNVEALEETHVCTIKKNDFKNLLREYPEIGLKIIEELCNRL 143 Query: 124 YRNIVSLTQNQSFPLVNRLAAFILLSQEG----------DLYHEKHTQAAEYLGVSYRHL 173 R ++ + R++A +L A Y+GV+ + Sbjct: 144 ERLENAVENMGTKNAEERVSAVLLEFARKYGKESQNGIIVELPLSREGIANYIGVARETV 203 Query: 174 LYVLAQFIHDGLLI-KSKKGYLIKNRKQL 201 + +G++ K +I+N L Sbjct: 204 SRKMNMLQEEGIIEMVGNKKVIIRNIDAL 232 >UniRef50_C6PP44 Transcriptional regulator, Crp/Fnr family n=1 Tax=Clostridium carboxidivorans P7 RepID=C6PP44_9CLOT Length = 216 Score = 182 bits (463), Expect = 8e-45, Method: Composition-based stats. Identities = 30/196 (15%), Positives = 60/196 (30%), Gaps = 2/196 (1%) Query: 11 LTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDFFAAPCFI 70 L ++ F I Q+G+ +YL G +++ ++G ++ + Sbjct: 18 LFEIFKTKPARIFKNNQLIYQQGEIADNFYYLKEGIVQVFVNSSDGLEKILTIYKNGEIF 77 Query: 71 GEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKNYRNIVSL 130 GE D + + + + + + + LS K + Sbjct: 78 GEASFFDGFPRMSSAKTLSDSEIITINKTDIMSYFQKEPFLALNFIELLSQKVRMLSNEI 137 Query: 131 TQNQSFPLVNRLAAFILLSQEGDLYHE--KHTQAAEYLGVSYRHLLYVLAQFIHDGLLIK 188 R+A ++L Y H + +GVS + L +F + Sbjct: 138 DNISFLSAEKRIAQYLLRMNRYTSYPINCTHEDIGKSVGVSRITVSRTLNKFSKYKWVYT 197 Query: 189 SKKGYLIKNRKQLSGL 204 K LI N+ L Sbjct: 198 KYKKILILNKNALLEF 213 >UniRef50_Q15QG5 Transcriptional regulator, Crp/Fnr family n=1 Tax=Pseudoalteromonas atlantica T6c RepID=Q15QG5_PSEA6 Length = 230 Score = 182 bits (463), Expect = 8e-45, Method: Composition-based stats. Identities = 35/211 (16%), Positives = 64/211 (30%), Gaps = 10/211 (4%) Query: 6 FKDCFLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDFFA 65 + + +L + Q+ L+ + G+ RL G+ ++ + Sbjct: 19 LPQDAIEQLVTAAKLKRLDTGQLVYQKHDLGDGLYCVMSGKVRLSNVTLEGKELILTWMQ 78 Query: 66 APCFIGEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKNYR 125 + GEI L D A E C L + + ++ LL+ L + Sbjct: 79 PGNWFGEISLFDGLPRAHDAYADEPCELLKISSQDFKALLIERPTLYPHFMRLLCQRIRT 138 Query: 126 NIVSLTQNQSFPLVNRLAAFILLSQEGDLYH----------EKHTQAAEYLGVSYRHLLY 175 + + S L +L ILL EG + A L S + + Sbjct: 139 TFSFIDETGSLSLKGKLCGRILLFAEGLEHQAPIENGSSLCISQESLALMLHSSRQTVNK 198 Query: 176 VLAQFIHDGLLIKSKKGYLIKNRKQLSGLAL 206 +L + G++ I L L Sbjct: 199 LLQELQQQGVIKVHYGKITIVQHTMLKTLCQ 229 >UniRef50_C7PGE5 Transcriptional regulator, Crp/Fnr family n=2 Tax=Sphingobacteriales RepID=C7PGE5_CHIPD Length = 230 Score = 182 bits (463), Expect = 8e-45, Method: Composition-based stats. Identities = 32/200 (16%), Positives = 81/200 (40%), Gaps = 8/200 (4%) Query: 13 DVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDFFAAPCFIGE 72 ++A + F + + +EG+ + ++++ G+ +++ G+ ++ F +G Sbjct: 26 ALAAHRQHLTFKKGELLFREGEPVNGIYFVNAGKVKVHKHWGEGKELIVRFAKDGDIVGH 85 Query: 73 IELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKNYRNIVSLTQ 132 + + P + A+E + M ++ L + FL+ L + + + + ++ Sbjct: 86 RGVGSEMVYPVSATALEAVNICFIDMTFFQATLKVNHDFLQALMMFYATELQESEKNMRN 145 Query: 133 NQSFPLVNRLAAFILLSQEG--------DLYHEKHTQAAEYLGVSYRHLLYVLAQFIHDG 184 P+ R+A +L Q A Y G +Y +++ I + Sbjct: 146 LVHMPVKGRIAHALLNLQRKFGVNEEGYINMTLSRQDIASYTGTTYETAFRIMSDLIQEH 205 Query: 185 LLIKSKKGYLIKNRKQLSGL 204 ++I S K +K+ +L+ L Sbjct: 206 IIIISGKSIAVKDPARLARL 225 >UniRef50_Q97TL8 CRP (Cyclic AMP receptor protein) regulatory protein n=1 Tax=Clostridium acetobutylicum RepID=Q97TL8_CLOAB Length = 188 Score = 182 bits (463), Expect = 9e-45, Method: Composition-based stats. Identities = 30/184 (16%), Positives = 58/184 (31%), Gaps = 2/184 (1%) Query: 23 FLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDFFAAPCFIGEIELIDKDHEP 82 F I ++G+ +YL GR +++ +G ++ + GE D Sbjct: 2 FKDNQIIYRQGEIAKNFYYLKEGRVQVFVNSTDGLEKILAIYKKGEIFGEASFFDGFPRM 61 Query: 83 RAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKNYRNIVSLTQNQSFPLVNRL 142 + + + + + + L LS K + P R+ Sbjct: 62 SSAKTFSDSEIININKSDIMLYFQKEPLLALNFIELLSKKVRMLSNEIDSISFLPAEKRI 121 Query: 143 AAFIL--LSQEGDLYHEKHTQAAEYLGVSYRHLLYVLAQFIHDGLLIKSKKGYLIKNRKQ 200 A ++L + H + +GVS + L +F + K LI N+ Sbjct: 122 AQYLLNVSLSNNCSINCTHEDIGKAVGVSRVTVSRTLNKFSQYQWINTKYKKILILNKNA 181 Query: 201 LSGL 204 L Sbjct: 182 LLKF 185 >UniRef50_P29281 Catabolite gene activator n=65 Tax=Gammaproteobacteria RepID=CRP_HAEIN Length = 224 Score = 182 bits (462), Expect = 9e-45, Method: Composition-based stats. Identities = 32/198 (16%), Positives = 68/198 (34%), Gaps = 10/198 (5%) Query: 8 DCFLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDFFAAP 67 D L L + A+ ++ G+ + L+Y+ +G + + G+ ++ + A Sbjct: 23 DPVLDWFLTHCHLHKYPAKSTLIHAGEDATTLYYVIKGSVMVSSKDDEGKEMILTYLGAG 82 Query: 68 CFIGEIELID-KDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKNYRN 126 F GE L D V+ C + K YR L+ + L L L+ + Sbjct: 83 QFFGEAGLFDEGSKRSAWVKTKTTCEIAEISYKKYRQLIQANPEILMFLTAQLARRLQNT 142 Query: 127 IVSLTQNQSFPLVNRLAAFILLSQ---------EGDLYHEKHTQAAEYLGVSYRHLLYVL 177 +T + R+A ++ +G + + +G S + ++ Sbjct: 143 SRQVTNLAFLDVAGRIAQTLMNLAKQPEAMTHPDGMQIKITRQEIGQMVGCSRETVGRII 202 Query: 178 AQFIHDGLLIKSKKGYLI 195 L+ K ++ Sbjct: 203 KMLEDQNLIHAHGKTIVV 220 >UniRef50_Q6MK24 Transcriptional regulatory protein n=1 Tax=Bdellovibrio bacteriovorus RepID=Q6MK24_BDEBA Length = 233 Score = 182 bits (462), Expect = 1e-44, Method: Composition-based stats. Identities = 35/202 (17%), Positives = 67/202 (33%), Gaps = 2/202 (0%) Query: 7 KDCFLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDFFAA 66 L V F A I G P +F + G +L A+G + Sbjct: 30 NPDVLLMVEKARVSCRFKAGQIIFYSGNDPLGIFTIQSGLVKLEVISASGAAHTLRLVGP 89 Query: 67 PCFIGEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKNYRN 126 +G + + + A+E+C +P + + KL +S Sbjct: 90 GGTLGYRSMFANEPYHASAVAVEDCELCFVPKAEIMNIFKSYPELAMKLLSHISKDLRMA 149 Query: 127 IVSLTQNQSFPLVNRLAAFILLSQEGDLY-HEKHTQAAEYLGVSYRHLLYVLAQFIHDGL 185 R+A ++ Q+ + + + A++ G + ++ L+QF DGL Sbjct: 150 EEKWMDQMDKGASERIAEALIFLQDHFAHQNWTRREIAQWAGTTPETVIRTLSQFEKDGL 209 Query: 186 L-IKSKKGYLIKNRKQLSGLAL 206 + + I +R +L A Sbjct: 210 IDQTDGRSIRILSRDRLKDRAE 231 >UniRef50_UPI0001C31809 transcriptional regulator, Crp/Fnr family n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C31809 Length = 231 Score = 181 bits (461), Expect = 1e-44, Method: Composition-based stats. Identities = 32/209 (15%), Positives = 67/209 (32%), Gaps = 10/209 (4%) Query: 5 AFKDCFLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDFF 64 A L+ V+ + I +EG + L G R+ A+GR + F Sbjct: 20 ALGPEELSRVAEVAVPRRYEPGRVIFREGDASDTCYVLKNGHVRVIREHADGRTITLANF 79 Query: 65 AAPCFIGEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKNY 124 GE+ + + + ++ +++ +A+ R L+ KL V+L + Sbjct: 80 GPGDIFGELAMFEDERRSATIETLDDVEAIAILGSDMRRLMREHPDIAVKLVVSLGRRLR 139 Query: 125 RNIVSLTQNQSFPLVNRLAAFILLS----------QEGDLYHEKHTQAAEYLGVSYRHLL 174 + + +R+A + + L A+ G S Sbjct: 140 AANERIASQSFQTVQSRVANVVTQLVKEAQDEGAGERDVLVSATQADIAKLAGSSRESAS 199 Query: 175 YVLAQFIHDGLLIKSKKGYLIKNRKQLSG 203 LA G++ + + + + L Sbjct: 200 RFLAVLERAGVIEQGRGKLTVHDPSALER 228 >UniRef50_A4AEI3 Transcriptional regulator, Crp/Fnr family protein n=1 Tax=marine actinobacterium PHSC20C1 RepID=A4AEI3_9ACTN Length = 231 Score = 181 bits (460), Expect = 2e-44, Method: Composition-based stats. Identities = 36/212 (16%), Positives = 75/212 (35%), Gaps = 8/212 (3%) Query: 4 SAFKDCFLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDF 63 + + + + + + + Q + LF L +GR R++ +G+ + Sbjct: 18 ADLSPAEIEQMDRMAPSRSYSLGEMVFSQSQPVTALFILKKGRIRIFRVTEDGKALTMAI 77 Query: 64 FAAPCFIGEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKN 123 GE+ ++ + +AIE+ L LL D ++ L + Sbjct: 78 LEPGAVFGEMMMVGQRMYDNYAEAIEDVEVCLLNTADVERYLLADPRIAIRISRHLGEQV 137 Query: 124 YRNIVSLTQNQSFPLVNRLAAFILLSQE--------GDLYHEKHTQAAEYLGVSYRHLLY 175 R LT PL +R+ + +L E H Q A LG + Sbjct: 138 VRLEERLTDLALRPLQSRVCSTLLRLTETARTPRFAHPTIRLSHDQLAGLLGATRESTSK 197 Query: 176 VLAQFIHDGLLIKSKKGYLIKNRKQLSGLALE 207 ++ G++ + + +I++ L+ LA + Sbjct: 198 AMSDLASRGIIRQGRARVIIQDMDALAQLARQ 229 >UniRef50_A7GXI3 Transcription regulator n=5 Tax=Campylobacter RepID=A7GXI3_CAMC5 Length = 214 Score = 181 bits (460), Expect = 2e-44, Method: Composition-based stats. Identities = 44/200 (22%), Positives = 82/200 (41%), Gaps = 2/200 (1%) Query: 6 FKDCFLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDFFA 65 + + + T + +++ EG++P WL +L G +LY T ANG+ + A Sbjct: 13 LDEDEMKQLEDITIAKKYKKGEFLFMEGEEPKWLIFLLSGSVKLYKTAANGKEIFLHQLA 72 Query: 66 APCFIGEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKNYR 125 F+ E+ + P + L + + + L L++ L ++S K Sbjct: 73 PMNFVAEVVNFENIVYPASAVFTISGEVLKINYEKFATLFLSNPKICMNLIKSMSEKLRI 132 Query: 126 NIVSLTQNQSFPLVNRLAAFILLSQEGDLYHEKHTQAAEYLGVSYRHLLYVLAQFIHDGL 185 L Q ++A FIL+ E KHT+ A L ++ +L +F L Sbjct: 133 TSNLLHQELVLNSEAKVAKFILMH-EDLFNSLKHTKIASILNITPETFSRILNKFKTANL 191 Query: 186 LIKSKKGYLI-KNRKQLSGL 204 + +K +I KN +L+ + Sbjct: 192 IKLDEKNQIIDKNVDELTQI 211 >UniRef50_Q2G6R8 Transcriptional regulator, Crp/Fnr family n=3 Tax=Sphingomonadaceae RepID=Q2G6R8_NOVAD Length = 229 Score = 181 bits (460), Expect = 2e-44, Method: Composition-based stats. Identities = 41/208 (19%), Positives = 87/208 (41%), Gaps = 8/208 (3%) Query: 7 KDCFLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDFFAA 66 + L+D+ ++ F ++ +G++ LF + G AR+ ANGR ++D+ A Sbjct: 20 EQAELSDIIGRGQVRTFKPGQELMAQGEEGKTLFIVLSGLARVSMVAANGREIILDYAEA 79 Query: 67 PCFIGEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKNYRN 126 +GEI +D +V+AIE L L + ++ +L ++ + +N Sbjct: 80 GHVLGEIAFLDGGERTASVEAIEPVEALVLTRSAFAEIIDRHKGLSLRLLKAMARRLRQN 139 Query: 127 IVSLTQNQSFPLVNRLAAFILLSQEGD--------LYHEKHTQAAEYLGVSYRHLLYVLA 178 + ++++ RLA F+L G+ + + G+S + L+ Sbjct: 140 NAVIEADRAYTSGPRLARFLLRLMMGEGSDAGAQLKIALSQGELGNFAGMSREQINRQLS 199 Query: 179 QFIHDGLLIKSKKGYLIKNRKQLSGLAL 206 + +G++ I +R+ L +A Sbjct: 200 AWAENGIVALKGGRVTILDREALVDVAE 227 >UniRef50_A0NV10 Cyclic nucleotide-binding:Bacterial regulatory protein, Crp n=3 Tax=Rhodobacteraceae RepID=A0NV10_9RHOB Length = 229 Score = 180 bits (459), Expect = 2e-44, Method: Composition-based stats. Identities = 30/210 (14%), Positives = 61/210 (29%), Gaps = 11/210 (5%) Query: 5 AFKDCFLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDFF 64 +S R A + + G + + + G ++ G L+ Sbjct: 16 GLDPELAVGLSRLARPMKISAGTILFENGDPGNGCYAVLEGSLKVSLLSVEGDEQLLAVL 75 Query: 65 AAPCFIGEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKNY 124 +GE+ L+D V A++E + ++ + R + + + Sbjct: 76 GPGDLVGELALLDGRPRSATVIALKEAQLAFIDKAAFQRFADENPAVYRHMLSIVGKRLR 135 Query: 125 RNIVSLTQNQSFPLVNRLAAFILLSQEG-----------DLYHEKHTQAAEYLGVSYRHL 173 L PL R+A +L E Y A G + ++ Sbjct: 136 HANDVLAARSFLPLPGRVAQTLLQLAETFGKPLDDGRLLIHYKLSQADIANMAGAARENV 195 Query: 174 LYVLAQFIHDGLLIKSKKGYLIKNRKQLSG 203 VL + G + + Y ++ L Sbjct: 196 SRVLNDWKRAGTISRISGYYCLEQMDFLEK 225 >UniRef50_C9YCU2 Putative uncharacterized protein n=1 Tax=Curvibacter putative symbiont of Hydra magnipapillata RepID=C9YCU2_9BURK Length = 238 Score = 180 bits (459), Expect = 2e-44, Method: Composition-based stats. Identities = 43/217 (19%), Positives = 73/217 (33%), Gaps = 14/217 (6%) Query: 4 SAFKDCFLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANG---RVSL 60 + F + R+ H A + + P L+ + RG R+ G R ++ Sbjct: 22 AQLPPDFAQGLLDMARVRHLQAGEKLFLRDAAPCGLYAVVRGTIRISGHSGEGDGAREAV 81 Query: 61 IDFFAAPCFIGEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLS 120 + + P + GEI + D A E C L +P + L R L V ++ Sbjct: 82 LVLLSPPQWFGEISVFDGSARTHDAHAAEPCTLLHIPHEELLAWLTQHPAHWRDLAVLMA 141 Query: 121 HKNYRNIVSLTQNQSFPLVNRLAAFILLSQEG-----------DLYHEKHTQAAEYLGVS 169 K VS+ + P RLA +L + Q A +GVS Sbjct: 142 DKLRLAFVSMEEQTVLPAPQRLARRLLTMALSYGQATESDRTLRVLVVTQEQLALMIGVS 201 Query: 170 YRHLLYVLAQFIHDGLLIKSKKGYLIKNRKQLSGLAL 206 + +L F G+L + + + + L Sbjct: 202 RQTTNQILRDFKARGVLHVQRGCIELLDLQALRAECE 238 >UniRef50_C6HW21 Putative transcriptional regulator, Crp/Fnr family n=1 Tax=Leptospirillum ferrodiazotrophum RepID=C6HW21_9BACT Length = 242 Score = 180 bits (459), Expect = 2e-44, Method: Composition-based stats. Identities = 36/210 (17%), Positives = 72/210 (34%), Gaps = 10/210 (4%) Query: 4 SAFKDCFLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDF 63 ++ +++ + IV+ + S ++ L G ++ A GR + Sbjct: 28 QGLTPEHKERLAIFSKIRRYRPGHRIVEANEVGSEMYLLLSGSVKVSAEDPAGREITLAV 87 Query: 64 FAAPCFIGEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKN 123 + F GE+ L D V+ +E +++P L+ +L TLS + Sbjct: 88 LYSGDFFGEVSLWDNRGRTATVETLEPSQVVSIPGPPLLDLMRESPDMAFRLLTTLSARL 147 Query: 124 YRNIVSLTQNQSFPLVNRLAAFILL--SQEGDL--------YHEKHTQAAEYLGVSYRHL 173 L ++A +L ++EG L + A GV+ + Sbjct: 148 RETDAKLMHMAYGDSYQKVARSLLEIYTKEGGLDGETPFIPDRFTRQELASLSGVTRETV 207 Query: 174 LYVLAQFIHDGLLIKSKKGYLIKNRKQLSG 203 L F G++ K +I + +L Sbjct: 208 SRSLGAFTMAGVIRLEKDRIVILSLDRLKK 237 >UniRef50_C6VTE5 Transcriptional regulator, Crp/Fnr family n=1 Tax=Dyadobacter fermentans DSM 18053 RepID=C6VTE5_DYAFD Length = 354 Score = 180 bits (458), Expect = 3e-44, Method: Composition-based stats. Identities = 34/200 (17%), Positives = 76/200 (38%), Gaps = 8/200 (4%) Query: 13 DVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDFFAAPCFIGE 72 ++ D ++ ++ I EG PS +F+L +G+ + Y + NG+ + D F G Sbjct: 153 KLAEDKKVKILRKKETIYTEGSFPSHVFFLQKGKVKAYKSNENGKEYITDLLKEGEFFGY 212 Query: 73 IELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKNYRNIVSLTQ 132 ++L+ A+E+ +P + LL + K LS++ L Q Sbjct: 213 LDLLHGAPYEETAIALEKSEVAMIPKDDFFNLLQGNREVASKFIRMLSNEIKEREERLLQ 272 Query: 133 NQSFPLVNRLAAFILLS--------QEGDLYHEKHTQAAEYLGVSYRHLLYVLAQFIHDG 184 + R+A +++ + A +G + ++ L+ F + Sbjct: 273 LAYNSVRKRVAQALVMLVQRYQEDRSKPFSMAVTREDIASMVGTATETVIRTLSDFKEER 332 Query: 185 LLIKSKKGYLIKNRKQLSGL 204 L+ + ++L+ + Sbjct: 333 LVDMKGSQITVLEYEKLARM 352 >UniRef50_B1N0G1 cAMP-binding protein-catabolite gene activator or regulatory subunit of cAMP-dependent protein kinase n=2 Tax=Leuconostoc RepID=B1N0G1_LEUCK Length = 230 Score = 180 bits (457), Expect = 3e-44, Method: Composition-based stats. Identities = 33/206 (16%), Positives = 76/206 (36%), Gaps = 8/206 (3%) Query: 4 SAFKDCFLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDF 63 + D + ++ ++ + + + G + L+ + GR R+Y+ +GR I Sbjct: 20 NHLNDEQMHLIAQSANEVQYVKNELLFRFGDKDDTLYIINNGRVRIYSLSESGREQTIRI 79 Query: 64 FAAPCFIGEIELID-KDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHK 122 F+GE+ ++ + + +AI E + K L +R++ ++ + Sbjct: 80 LHPGDFMGEVAVLQTEGYHSNYAEAISETSICRIHKKDLDQYLDLYPEIMRRILSDITKR 139 Query: 123 NYRNIVSLTQNQSFPLVNRLAAFILLSQEGD------LYHEKHTQAAEYLGVSYRHLLYV 176 + Q P+ R+ F+ + E + A YLG + + Sbjct: 140 LQLSEKQTVQVSIEPVEARIIDFLSENVEDEKNHTYVTLPMSKKDLATYLGTTPETISRK 199 Query: 177 LAQFIHDGLLIKS-KKGYLIKNRKQL 201 + GL+ + +K I + +L Sbjct: 200 FSSLEERGLIKRHTQKCVEIFDLDEL 225 >UniRef50_A3EW66 Putative transcriptional regulator, Crp/Fnr family n=2 Tax=Leptospirillum sp. Group II RepID=A3EW66_9BACT Length = 237 Score = 180 bits (457), Expect = 4e-44, Method: Composition-based stats. Identities = 41/209 (19%), Positives = 70/209 (33%), Gaps = 11/209 (5%) Query: 6 FKDCFLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDFFA 65 K L + RL H+ + I+QE + LF + G ++ GR ++ Sbjct: 22 LKAEELETLEKIVRLRHYRSGQKIIQEFDRGMELFVIVSGSVKISTEDVEGREIIVSIAY 81 Query: 66 APCFIGEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKNYR 125 F GEI L+D D V AIE L++ + + F ++ + + + Sbjct: 82 PSDFFGEIALLDDDTRSATVTAIEPTTVLSIEKNDFLRFFVAYPEFALRMLAVMGQRIRK 141 Query: 126 NIVSLTQNQSFPLVNRLAAFILLSQEGDLY-----------HEKHTQAAEYLGVSYRHLL 174 L ++A +L E + + A GVS + Sbjct: 142 TDEKLIHMAFADSFAKIARTLLTIYEKEGVQANGSLPYIHDRFTRQELASLSGVSRETVS 201 Query: 175 YVLAQFIHDGLLIKSKKGYLIKNRKQLSG 203 L FI L+ + I N +L Sbjct: 202 RSLGAFIQAELIRIADNRIYILNENKLRR 230 >UniRef50_Q3SFR0 Transcriptional Regulator, Crp/Fnr family n=1 Tax=Thiobacillus denitrificans ATCC 25259 RepID=Q3SFR0_THIDA Length = 254 Score = 180 bits (457), Expect = 4e-44, Method: Composition-based stats. Identities = 37/223 (16%), Positives = 72/223 (32%), Gaps = 10/223 (4%) Query: 4 SAFKDCFLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDF 63 + L ++ R A + EG + + + +G LY G + Sbjct: 18 AGVDAGHLATLAQAARSRDARAGQLLFAEGDEARAFYLVAQGEVHLYRFSPQGEEKVFQM 77 Query: 64 FAAPCFIGEIELI-DKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHK 122 + E + P +A+ + A+P + L + L L+ + Sbjct: 78 LGDGDLLAEAAMFLSPAVYPMTARAVRDSTLFAVPRQALLSLCAASPPLMLTLLSALARR 137 Query: 123 NYRNIVSLTQNQSFPLVNRLAAFILLSQEG-----DLYHEKHTQAAEYLGVSYRHLLYVL 177 Y+ + + RL A++L + A LG++ L +L Sbjct: 138 LYQAMNRIDHLTLNNAGQRLVAYLLDLRRQQHGNWISIPVNFAVLAAQLGMTPETLSRLL 197 Query: 178 AQFIHDGLLIKSKKGYLIKNRKQL-SGLA---LEMDPENKFSG 216 +F DGLL + ++ + L +A M P + G Sbjct: 198 QKFRQDGLLSGKGRTLVLLDADMLCEKVALPRQAMRPPSHIGG 240 >UniRef50_C6BVF1 Transcriptional regulator, Crp/Fnr family n=2 Tax=Desulfovibrio RepID=C6BVF1_DESAD Length = 226 Score = 180 bits (457), Expect = 4e-44, Method: Composition-based stats. Identities = 33/207 (15%), Positives = 75/207 (36%), Gaps = 2/207 (0%) Query: 4 SAFKDCFLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDF 63 + K L +S + + E + L L G+ +L+ G+ I Sbjct: 17 AQLKKEQLERLSQYAVINDIPRKSIFFSEDKASKGLHVLLTGKVKLFKISDEGKEQTIFV 76 Query: 64 FAAPCFIGEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKN 123 F + P + A+E+ L + Y L+ D L ++ +S + Sbjct: 77 FGPGEPFCLCSVFSDGVLPANMSALEDSRVLFINPTEYEKLVQEDPTILMQMMRVMSRRL 136 Query: 124 YRNIVSLTQNQSFPLVNRLAAFILLSQEGDLYHE--KHTQAAEYLGVSYRHLLYVLAQFI 181 + + + +RLAA+ L ++ + + + ++ +G++ L + + Sbjct: 137 KDAMEMIDSLSLKQVPSRLAAYFLSHEKNGQVNMDISYRELSKIIGITPEALSRTMKKMG 196 Query: 182 HDGLLIKSKKGYLIKNRKQLSGLALEM 208 +GL+ I +R++LS + Sbjct: 197 SNGLISVDGSEIEIIDREELSRCREGV 223 >UniRef50_A9NE93 Transcriptional regulator, Crp/Fnr family n=1 Tax=Acholeplasma laidlawii PG-8A RepID=A9NE93_ACHLI Length = 231 Score = 179 bits (456), Expect = 4e-44, Method: Composition-based stats. Identities = 32/212 (15%), Positives = 72/212 (33%), Gaps = 7/212 (3%) Query: 4 SAFKDCFLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDF 63 + + LT ++ + F + I G++ L+ + G+ ++Y N + ++ Sbjct: 20 NHLELDELTKITELIKSKSFDKGELIFSYGEKSDTLYIVRSGQIKMYYLSENAKEHILRM 79 Query: 64 FAAPCFIGEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKN 123 FIGE+ + + +AI + + L+ K+ L+ + Sbjct: 80 LFPGDFIGELSIFLDEKNNAYAEAITPVEVCMIKKEDISKLMEIYPKIGLKIIGELTQRL 139 Query: 124 YRNIVSLTQNQSFPLVNRLAAFILLSQE------GDLYHEKHTQAAEYLGVSYRHLLYVL 177 ++ + + + R+ ++L + A +LG + L L Sbjct: 140 KKSEKQASWIATEQVEKRILLYMLELYDSNEPLKPIELPMTKKDLASFLGTTPETLSRKL 199 Query: 178 AQFIHDGLL-IKSKKGYLIKNRKQLSGLALEM 208 A G++ S K I L +M Sbjct: 200 AYLEDLGMIHQLSNKQIKIVKMDLLLEFLNQM 231 >UniRef50_Q2T0J6 Transcriptional regulator, putative n=61 Tax=Proteobacteria RepID=Q2T0J6_BURTA Length = 266 Score = 179 bits (456), Expect = 5e-44, Method: Composition-based stats. Identities = 40/223 (17%), Positives = 79/223 (35%), Gaps = 11/223 (4%) Query: 5 AFKDCFLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDFF 64 A ++A A + + G P L+ + G + A A+G+ +L+ Sbjct: 20 ALPAELRDALAATAVPRRLAAGQVLFRRGDAPCGLYAVLSGALSVGAVDASGKEALLTVA 79 Query: 65 AAPCFIGEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKNY 124 + GEI L D+ A+E+ + +P + LL + R L + ++ K Sbjct: 80 EPMTWFGEIALFDELPRTHDAIALEDALLMHVPQAALQQLLDETPRYWRYLALLMAQKLR 139 Query: 125 RNIVSLTQNQSFPLVNRLAAFILLSQEG--------DLYHEKHTQAAEYLGVSYRHLLYV 176 + +++ P RLAA +L+ EG + L +S + + Sbjct: 140 MSFMNVEALTLMPAAQRLAARLLMIAEGYGGISTRHRRIRLSQERLGAMLSLSRQTANQL 199 Query: 177 LAQFIHDGLLIKSKKGYLIKNRKQLSG---LALEMDPENKFSG 216 L + G++ I + L A + + +G Sbjct: 200 LKELAARGVVRLHVGEIEIVDLNALRAASGAAHRAEDDLAGAG 242 >UniRef50_C0QTS3 Transcriptional regulator, Crp/Fnr family n=1 Tax=Persephonella marina EX-H1 RepID=C0QTS3_PERMH Length = 209 Score = 179 bits (456), Expect = 5e-44, Method: Composition-based stats. Identities = 48/200 (24%), Positives = 75/200 (37%), Gaps = 2/200 (1%) Query: 5 AFKDCFLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDFF 64 D L + + + D + EG++P L+ LT G R+Y T G + F Sbjct: 11 NLSDEHLKKIQKISFEREYERGDLLFYEGEEPENLYILTEGILRVYKTDIKGHEITLHHF 70 Query: 65 AAPCFIGEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKNY 124 I E + P + L + K + LL D+ + +L +K Sbjct: 71 HPVSLIAERANFENIPYPANAEFETNGKVLVINFKTFEKELLKDSNLCFNIVKSLLYKIK 130 Query: 125 RNIVSLTQNQSFPLVNRLAAFILLSQEGDLYHEKHTQAAEYLGVSYRHLLYVLAQFIHDG 184 + QN V R A FI E KH + A L ++ L +L +F G Sbjct: 131 ILDDVIVQNLMMDAVTRTAKFIYEH-EDLFISLKHNKIASILNMTPETLSRILKKFKTRG 189 Query: 185 LLIKSKKGYLIKNRKQLSGL 204 ++ K Y I NR++L L Sbjct: 190 IIQKDGGTYKI-NREELKKL 208 >UniRef50_D1A2I7 Transcriptional regulator, Crp/Fnr family n=1 Tax=Thermomonospora curvata DSM 43183 RepID=D1A2I7_THECD Length = 243 Score = 179 bits (456), Expect = 5e-44, Method: Composition-based stats. Identities = 33/209 (15%), Positives = 69/209 (33%), Gaps = 9/209 (4%) Query: 4 SAFKDCFLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDF 63 S L + A + + + +G +Y+ RG+ +L + A+G +++ Sbjct: 17 SGLTRQQLEIIRAGSFPVSLERGEILFHQGDPVRGFYYVLRGQMQLTVSAADGTQKVVEL 76 Query: 64 FAAPCFIGEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKN 123 + GE + P A+ L + LL D F R++ ++ + Sbjct: 77 VTSGESFGEAVVFAGQRYPVTAGALVATRLLGISSGAVLDLLDRDPSFARRMLANMAVRL 136 Query: 124 YRNIVSLTQNQSFPLVNRLAAFILLSQEGD---------LYHEKHTQAAEYLGVSYRHLL 174 R I + + R+ F+L G+ + A L ++ L Sbjct: 137 RRLIRDVEAYSLQSGIQRVIGFLLHEARGESGPAHECTVTLPTRKHVLASRLNIAPETLS 196 Query: 175 YVLAQFIHDGLLIKSKKGYLIKNRKQLSG 203 +L GL+ + + + L Sbjct: 197 RILRDLSAAGLISVQGRRITLHDVPALEA 225 >UniRef50_C6LEY7 Regulatory protein nsr n=1 Tax=Bryantella formatexigens DSM 14469 RepID=C6LEY7_9FIRM Length = 229 Score = 179 bits (455), Expect = 7e-44, Method: Composition-based stats. Identities = 92/207 (44%), Positives = 130/207 (62%) Query: 6 FKDCFLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDFFA 65 D F D+ T + F + + ++QEG+ P +L+YLT GRA+L+ + NGR+SLI+F Sbjct: 19 LSDFFSFDIRPYTSIIRFDSEENLLQEGETPRFLYYLTEGRAKLFLSHGNGRISLINFLD 78 Query: 66 APCFIGEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKNYR 125 APCFIGE+EL V AI C C A+ ++ + +L+DT FLR LC+ LS K Sbjct: 79 APCFIGEMELFGAQKTANGVTAITPCICYAIRIRDCKERILSDTKFLRCLCMLLSRKAVG 138 Query: 126 NIVSLTQNQSFPLVNRLAAFILLSQEGDLYHEKHTQAAEYLGVSYRHLLYVLAQFIHDGL 185 N + ++NQS+ L RLA FILL+ +Y EKHT+ +E+LGV+YRHLLYVLA F+ G Sbjct: 139 NTCNYSKNQSYSLEVRLADFILLTSCNRMYREKHTEVSEFLGVTYRHLLYVLADFVKRGY 198 Query: 186 LIKSKKGYLIKNRKQLSGLALEMDPEN 212 L K+ +GYLI++ L LA + N Sbjct: 199 LKKTDRGYLIQDMDALRKLAENITGGN 225 >UniRef50_B8G2Z1 Transcriptional regulator, Crp/Fnr family n=3 Tax=Chloroflexus RepID=B8G2Z1_CHLAD Length = 222 Score = 178 bits (454), Expect = 8e-44, Method: Composition-based stats. Identities = 37/210 (17%), Positives = 68/210 (32%), Gaps = 8/210 (3%) Query: 5 AFKDCFLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDFF 64 D++A ++ + A + +F L +GR R+Y A GR + Sbjct: 13 DLDPAAQADLAALWQVATYPAGHIFHLPNEVGQHVFLLQQGRVRIYKLSAEGRALTLLVL 72 Query: 65 AAPCFIGEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKNY 124 P GE+ L+ +A+ +C + + +R L L + + Sbjct: 73 NPPSLFGEMTLVGSGTYDTCAEAMTDCVVAQIDRETFRDFLNRYPGAALNLMELMGSRLR 132 Query: 125 RNIVSLTQNQSFPLVNRLAAFILLSQEGDL--------YHEKHTQAAEYLGVSYRHLLYV 176 L + RLAA +L + H Q AE +G + Sbjct: 133 TMEQRLADIAFKSVPQRLAALLLDLAGDSVEEAAPATLVRYTHQQLAEMIGAYRETVTKA 192 Query: 177 LAQFIHDGLLIKSKKGYLIKNRKQLSGLAL 206 L L+ + ++ + +L LA Sbjct: 193 LGDMREANLIRIDDETIILVDPDRLRRLAS 222 >UniRef50_A2U1H8 Transcriptional regulator, CAP family n=1 Tax=Polaribacter sp. MED152 RepID=A2U1H8_9FLAO Length = 259 Score = 178 bits (454), Expect = 8e-44, Method: Composition-based stats. Identities = 32/211 (15%), Positives = 69/211 (32%), Gaps = 8/211 (3%) Query: 5 AFKDCFLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDFF 64 L +SA + + EG+ + +F + G ++ NG+ +++ Sbjct: 48 HLSKDELIRMSACKTSKIIKKGEPLFIEGEHINGVFCIKDGICKVSKISDNGKNQIVNLI 107 Query: 65 AAPCFIGEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKNY 124 IGE L+ ++ A+E+ +P L + F + +++ Sbjct: 108 KKGDLIGERSLLTEEVSNLNAVALEDLEVCFIPKSEIVKDLEKNQNFTMDVLKNMANSLK 167 Query: 125 RNIVSLTQNQSFPLVNRLAAFILLSQE--------GDLYHEKHTQAAEYLGVSYRHLLYV 176 + + RLA +L Q H A +G + + + Sbjct: 168 NADNLIVDMAQKSVKQRLAETLLKLQTKFGTTEEGNLDIHLSREDIANIIGTATESAIRL 227 Query: 177 LAQFIHDGLLIKSKKGYLIKNRKQLSGLALE 207 L++F G + K + N L ++ Sbjct: 228 LSEFKKKGYIEMKGKSISVANENGLKKVSSG 258 >UniRef50_A9B1R0 Transcriptional regulator, Crp/Fnr family n=1 Tax=Herpetosiphon aurantiacus ATCC 23779 RepID=A9B1R0_HERA2 Length = 222 Score = 178 bits (453), Expect = 1e-43, Method: Composition-based stats. Identities = 30/207 (14%), Positives = 67/207 (32%), Gaps = 5/207 (2%) Query: 5 AFKDCFLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDFF 64 + +S+ I EG ++ + GR ++ GR ++ Sbjct: 15 DLSPTIIAALSSHANEQTVERGQIITLEGDPAVAMYLVYSGRIKVVRHSIEGREHILHVV 74 Query: 65 AAPCFIGEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKNY 124 A + + + P +A+ LA+P +H R + + +++ + Sbjct: 75 EAYDHFNTVPMFREARCPATSEALVTSQLLAIPREHIRQVAQQHPELALAMLGEFANRLH 134 Query: 125 RNIVSLTQNQSFPLVNRLAAFILLSQ-----EGDLYHEKHTQAAEYLGVSYRHLLYVLAQ 179 + + + RLA +L +L + A ++G + L Sbjct: 135 NLVGLIENLALHTVNGRLARLLLQQAALAEQNPNLAPLTQAEMAAHIGSVREMVGRALKA 194 Query: 180 FIHDGLLIKSKKGYLIKNRKQLSGLAL 206 F GL+ + I + + L+ A Sbjct: 195 FDAQGLIRLERGIIEIIDPQGLAAQAE 221 >UniRef50_B1ZWR7 Transcriptional regulator, Crp/Fnr family n=1 Tax=Opitutus terrae PB90-1 RepID=B1ZWR7_OPITP Length = 238 Score = 178 bits (453), Expect = 1e-43, Method: Composition-based stats. Identities = 33/206 (16%), Positives = 61/206 (29%), Gaps = 6/206 (2%) Query: 4 SAFKDCFLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDF 63 S L ++A + L Y+ +EG + RG ++ G+ +I Sbjct: 24 SGLSASDLETIAAFSILRSVAKGAYLFREGDPAEGFYVAQRGAFNVHRVSPTGKEQVIYV 83 Query: 64 FAAPCFIGEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKN 123 F E L P +A+E + +P + LL ++ ++S Sbjct: 84 FRPGESFAEAALASPQGYPANARAVEPSGVVLVPKVPFLGLLGRRPDLALRMLGSMSQHL 143 Query: 124 YRNIVSLTQNQSFPLVNRLAAFILLSQEGD------LYHEKHTQAAEYLGVSYRHLLYVL 177 + + + RL ++ A LG S L Sbjct: 144 RVLVGLVEDMTLKDVETRLLNWLCKRLPRGAGAPVIELGTTKRVLAAELGTSSETLSRTF 203 Query: 178 AQFIHDGLLIKSKKGYLIKNRKQLSG 203 A+ + LL K + + L Sbjct: 204 ARLRDERLLTVRGKELHVADADALRA 229 >UniRef50_Q2LV90 CAMP-dependent transcriptional regulator n=2 Tax=Syntrophus aciditrophicus SB RepID=Q2LV90_SYNAS Length = 249 Score = 178 bits (453), Expect = 1e-43, Method: Composition-based stats. Identities = 34/207 (16%), Positives = 69/207 (33%), Gaps = 10/207 (4%) Query: 6 FKDCFLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDFFA 65 F + L +++ + + + +G S F + G R+ + G Sbjct: 39 FNNSELRHLASLLKGQSLDKGEILFHKGDTGSAFFIIANGLIRISVSNKAGDEVTFAHLR 98 Query: 66 APCFIGEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKNYR 125 F GE+ L+D+ A+E+ L + P L + + + LS + R Sbjct: 99 GGDFFGEMALLDEQTRSADATALEDSTLYVLDRNDFFPFLFENENAVHSILRALSMRLRR 158 Query: 126 NIVSLTQNQSFPLVNRLAAFILLSQEGDLY----------HEKHTQAAEYLGVSYRHLLY 175 L + + +RLA +L E + GV+ + Sbjct: 159 TDDILAETAFLTVSSRLARRLLELAEPSQLSGRESAEYQVRMSQRELGAMPGVTRESINK 218 Query: 176 VLAQFIHDGLLIKSKKGYLIKNRKQLS 202 L G++ S+ I++ ++L Sbjct: 219 ELKILKDRGIITTSRGNIGIQDMERLK 245 >UniRef50_C1XRF8 cAMP-binding protein n=1 Tax=Meiothermus silvanus DSM 9946 RepID=C1XRF8_9DEIN Length = 222 Score = 178 bits (453), Expect = 1e-43, Method: Composition-based stats. Identities = 35/208 (16%), Positives = 79/208 (37%), Gaps = 5/208 (2%) Query: 5 AFKDCFLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANG-RVSLIDF 63 + L ++A+ R + +G L+ + RG ++Y G R ++ Sbjct: 15 GLESTDLVALAAEARFRSLAKGQTLFLQGDPVDALYLVARGLIKVYRFDPKGGRQVVLHL 74 Query: 64 FAAPCFIGEIELIDKDHE-PRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHK 122 + + + + P + +A+E+ L++P + + L+ R + L+ + Sbjct: 75 EGPHQAVAAVAVFLEQPYYPASAEALEDTLVLSIPREAFDRLVDTRASLARAVIRFLAKR 134 Query: 123 NYRNIVSLTQNQSFPLVNRLAAFILLSQE---GDLYHEKHTQAAEYLGVSYRHLLYVLAQ 179 + + L + + +RLA ++L E + + A LG + L Q Sbjct: 135 QSQLVHLLDRLVFAEVGSRLAEYLLQRAEAEGPGFRLPTNPELAALLGTVPEAVSRKLGQ 194 Query: 180 FIHDGLLIKSKKGYLIKNRKQLSGLALE 207 F +GL+ K+ + + L +A Sbjct: 195 FFREGLIEVKKRQVWVLDASALREIAEG 222 >UniRef50_A1SH88 Transcriptional regulator, Crp/Fnr family n=2 Tax=Bacteria RepID=A1SH88_NOCSJ Length = 261 Score = 178 bits (452), Expect = 1e-43, Method: Composition-based stats. Identities = 24/205 (11%), Positives = 64/205 (31%), Gaps = 10/205 (4%) Query: 4 SAFKDCFLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDF 63 + + + ++ + + I G LF L GR ++ + L++ Sbjct: 36 AGLSREEIIALDEAAKVRGYTEGEAIYHAGGSAEHLFLLASGRVKVLRPALDDSDVLVEV 95 Query: 64 FAAPCFIGEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKN 123 G + + P A+ L + R ++ + +SH+ Sbjct: 96 ITPGATFGSVAALGHSTYPDTAMALTVSCVLRISAADLRRVMNRHPAVALAVLDEVSHRL 155 Query: 124 YRNIVSLTQNQSFPLVNRLAAFILLSQEG----------DLYHEKHTQAAEYLGVSYRHL 173 ++ + + R+A+ +L+ + A G + + Sbjct: 156 EEAQQTVRRLSGGTVEQRVASSLLVLADQLGEPRDGGVLLQLPLTREDLASMTGTTTESV 215 Query: 174 LYVLAQFIHDGLLIKSKKGYLIKNR 198 L+++ GL+ ++ + +R Sbjct: 216 SRTLSKWRRAGLIETGRRWTSLTDR 240 >UniRef50_A9WEN3 Cyclic nucleotide-binding n=2 Tax=Chloroflexus RepID=A9WEN3_CHLAA Length = 239 Score = 178 bits (452), Expect = 1e-43, Method: Composition-based stats. Identities = 35/214 (16%), Positives = 66/214 (30%), Gaps = 12/214 (5%) Query: 5 AFKDCFLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDFF 64 + + + A Q+ LF L GR R+Y +G++ Sbjct: 26 DLDPDEIELLGKRAPMQRVPAGTVFFSPEQRAEVLFILKEGRVRIYRLSTDGKMLTTAIL 85 Query: 65 AAPCFIGEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKNY 124 GE+ L+ + +A+ C + + + LLL+D ++ L + Sbjct: 86 NEGTIFGEMALLGQQLHQHYAEALTPCLLCLMSREDVKRLLLSDPRIATRIVEILGQRLI 145 Query: 125 RNIVSLTQNQSFPLVNRLAAFILLSQE------------GDLYHEKHTQAAEYLGVSYRH 172 L+ L R+A +L + H AE LG Sbjct: 146 SAEQRLSDFAFKSLPQRIATLLLQMAQPAKPRLFRPGSSQREVALTHEALAEMLGTYRET 205 Query: 173 LLYVLAQFIHDGLLIKSKKGYLIKNRKQLSGLAL 206 +L GL+ + ++ + L L+ Sbjct: 206 TTKILNDLRTQGLIELRRGRIVLLDEIGLQKLSE 239 >UniRef50_A8M7L2 Transcriptional regulator, Crp/Fnr family n=1 Tax=Salinispora arenicola CNS-205 RepID=A8M7L2_SALAI Length = 237 Score = 178 bits (452), Expect = 2e-43, Method: Composition-based stats. Identities = 33/213 (15%), Positives = 68/213 (31%), Gaps = 7/213 (3%) Query: 4 SAFKDCFLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDF 63 S + L V+ D R L + + + G+ S + + G+ +L G +++ Sbjct: 20 SELPESLLAAVAVDARERRLLRGEVLFRAGELCSAFYCVLSGQVKLTVAGGGGGEKVLEI 79 Query: 64 FAAPCFIGEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKN 123 A E + P A+ L + + L+ D F R + V +S + Sbjct: 80 VAPGETFAEALMFGHRPYPVTAVALSATRLLVVGSRTVHDLIAQDPDFARLMLVGMSVRL 139 Query: 124 YRNIVSLTQNQSFPLVNRLAAFILLSQEGD-------LYHEKHTQAAEYLGVSYRHLLYV 176 +R + + R+A +L + A L +S H Sbjct: 140 HRLVRQIASVSLSSAAERVADLLLSLAGPEAGESVVVELPAGKAVLASRLNLSPEHFSRT 199 Query: 177 LAQFIHDGLLIKSKKGYLIKNRKQLSGLALEMD 209 L GL+ + + + ++ + Sbjct: 200 LRDLADTGLIRVEGRRVAVLDVARMRLVVEGGR 232 >UniRef50_D1C1E8 Transcriptional regulator, Crp/Fnr family n=1 Tax=Sphaerobacter thermophilus DSM 20745 RepID=D1C1E8_SPHTD Length = 248 Score = 178 bits (452), Expect = 2e-43, Method: Composition-based stats. Identities = 31/215 (14%), Positives = 72/215 (33%), Gaps = 10/215 (4%) Query: 6 FKDCFLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDFFA 65 L ++ R A +++ G + + L GR ++ +GR ++ Sbjct: 30 LPPEALAAIAYRLRPRPLEAGEFVFLAGTPAAHVSLLAEGRIKIIRETEDGREVILRVIQ 89 Query: 66 APCFIGEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKNYR 125 G + + P + A++ L +P+ + L+ + L+ + Sbjct: 90 PGEIFGGAGIWGEAVYPASAVALDAGVVLQMPVGDFSALIGEHPDVALAVIRELAQRLRE 149 Query: 126 NIVSLTQNQSFPLVNRLAAFILLSQE----------GDLYHEKHTQAAEYLGVSYRHLLY 175 +++ Q+ R+A +L AE G + Sbjct: 150 AEARISELQTERAERRIARALLRLASKTGVQTEDGVEIGLRLTRQDLAELAGTTLGTASR 209 Query: 176 VLAQFIHDGLLIKSKKGYLIKNRKQLSGLALEMDP 210 L+ + GL+I ++ +I+ +L LA ++ Sbjct: 210 TLSAWDRAGLIIAGRERVVIREMHRLVALAEDLHE 244 >UniRef50_Q0TRP4 Transcriptional regulator, Crp/Fnr family n=8 Tax=Clostridium perfringens RepID=Q0TRP4_CLOP1 Length = 236 Score = 177 bits (451), Expect = 2e-43, Method: Composition-based stats. Identities = 33/212 (15%), Positives = 78/212 (36%), Gaps = 12/212 (5%) Query: 5 AFKDCFLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDFF 64 + ++ FHF +YI EG++ S LF +++G + G+ ++ F Sbjct: 23 DLTEEEFNKLATGMTCFHFNKGEYICYEGEKLSKLFIISKGSVKTSKLTKGGKEQIMHIF 82 Query: 65 AAPCFIGEIELIDKD-HEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKN 123 + + GE L + + A+ + A+ +L + + +L+++ Sbjct: 83 SIGDYFGETSLFNNEGGILFNAIALNDVIVCAVDKDKVDSVLEENPRIAIVVLKSLTNRL 142 Query: 124 YRNIVSLTQNQSFPLVNRLAAFILLSQEG----------DLYHEKHTQAAEYLGVSYRHL 173 + + + R+A + + A Y G++ + Sbjct: 143 KDTEEFAHKLVTNDVRVRIAYMLKEFKRKYGKIENGEIFIDLPINREDMANYCGITRETM 202 Query: 174 LYVLAQFIHDGLLIKSKKG-YLIKNRKQLSGL 204 L+ F H+GL+ +IK+ ++L+ + Sbjct: 203 SRKLSIFEHEGLIEIRGNKSLIIKDIERLNKI 234 >UniRef50_B6IXV7 Transcriptional regulator, Crp n=1 Tax=Rhodospirillum centenum SW RepID=B6IXV7_RHOCS Length = 235 Score = 177 bits (451), Expect = 2e-43, Method: Composition-based stats. Identities = 42/211 (19%), Positives = 72/211 (34%), Gaps = 10/211 (4%) Query: 5 AFKDCFLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDFF 64 + V A ++ F + I +G L+ + RGR ++ + +V L++ Sbjct: 24 ILDAAEMEAVLAFAQVRRFAPDERIFTKGDPGDCLYAILRGRVAVHTESEDAKVMLLNTL 83 Query: 65 AAPCFIGEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKNY 124 AA GEI ++D V A E L + + + P L +L L + Sbjct: 84 AAGEVFGEIAMLDGGERTATVTAAEPADLLRIDRRDFLPFLEARPNLCIRLMTVLCERLR 143 Query: 125 RNIVSLTQNQSFPLVNRLAAFILLSQE----------GDLYHEKHTQAAEYLGVSYRHLL 174 + + RLA IL+ + A+ LGVS + Sbjct: 144 WTSAIIEDTVFLNVPRRLAKRILMLAQSEGRQTPDGIRIATFVSQDALAKMLGVSREIVN 203 Query: 175 YVLAQFIHDGLLIKSKKGYLIKNRKQLSGLA 205 L F DG + ++ + L LA Sbjct: 204 KTLKSFQADGAIAYRSGYLIVHDTAYLEKLA 234 >UniRef50_A8U8V8 Transcription regulator n=1 Tax=Carnobacterium sp. AT7 RepID=A8U8V8_9LACT Length = 232 Score = 177 bits (451), Expect = 2e-43, Method: Composition-based stats. Identities = 38/203 (18%), Positives = 74/203 (36%), Gaps = 7/203 (3%) Query: 4 SAFKDCFLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDF 63 + + + + H+ + I + G+ L+ L G+ R+Y +G+ LI Sbjct: 30 QSLAPIQKKRIHSLIQSKHYSRGETIYRPGETADSLYVLRSGKIRVYRLSDSGKEQLIRI 89 Query: 64 FAAPCFIGEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKN 123 F GE+ L K +A+ +C A+ +R LLL L ++ T+S++ Sbjct: 90 VYPGEFTGELALFKKGIYEAFTEALTDCSICAIKHTDFRELLLQYPLIAVEMLATISNRL 149 Query: 124 YRNIVSLTQNQSFPLVNRLAAFIL------LSQEGDLYHEKHTQAAEYLGVSYRHLLYVL 177 + + + NRL F++ ++ A YLG + L L Sbjct: 150 GMSEQQTAWATTETVRNRLLHFLISLVDSKENEPIIELKMAKKDLASYLGTTSESLSREL 209 Query: 178 AQFIHDGLL-IKSKKGYLIKNRK 199 A + ++ S + Sbjct: 210 AHLEKEHVIQEISYGKIKLFKLD 232 >UniRef50_A0XZU1 Transcriptional regulator, Crp/Fnr family protein n=1 Tax=Alteromonadales bacterium TW-7 RepID=A0XZU1_9GAMM Length = 222 Score = 177 bits (450), Expect = 2e-43, Method: Composition-based stats. Identities = 30/197 (15%), Positives = 74/197 (37%), Gaps = 4/197 (2%) Query: 14 VSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDFFAAPCFIGEI 73 + A ++ A+ + G ++ + G R+ +NG+ +++ F A + GE+ Sbjct: 26 LLAHGKVLTLKAQQALFLRGDAHDGIYVVLSGVMRISGVNSNGKEAVLSFIDASLWFGEV 85 Query: 74 ELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKNYRNIVSLTQN 133 L DK V A + +P + LL + ++ + L+ K S+ + Sbjct: 86 TLFDKGLRTHDVYAQTDAQLFYVPQRSLEQLLSKHPEYWQEFGLLLAQKLRLMFSSMEDH 145 Query: 134 QSFPLVNRLAAFILLSQEGDLYH----EKHTQAAEYLGVSYRHLLYVLAQFIHDGLLIKS 189 ++ +L+ E + Q A+ ++ + + +L + + + Sbjct: 146 ALHSAEQKVCNRLLMLSEQTNFSAPLALSQQQLADMTYLTRQTINQILQKLVKKNAISLG 205 Query: 190 KKGYLIKNRKQLSGLAL 206 + + + +L LA Sbjct: 206 YQCITVLDVSKLQALAS 222 >UniRef50_D1ART3 Transcriptional regulator, Crp/Fnr family n=1 Tax=Sebaldella termitidis ATCC 33386 RepID=D1ART3_SEBTE Length = 227 Score = 177 bits (450), Expect = 3e-43, Method: Composition-based stats. Identities = 111/211 (52%), Positives = 146/211 (69%) Query: 1 MSESAFKDCFLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSL 60 + S F + F + +L F +YI++E PS LF+LT GRA+LY TLANG+++L Sbjct: 14 IQRSGFMNFFSFPADSFVKLVTFSPNEYIIEESLLPSHLFFLTSGRAKLYTTLANGKIAL 73 Query: 61 IDFFAAPCFIGEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLS 120 IDFF APCF+GE+EL+ + +VQAIE C CLALP+ R +LL D +FLRK+C+ L Sbjct: 74 IDFFRAPCFVGEMELVGHTQDICSVQAIEPCVCLALPILQCREMLLTDPVFLRKICLYLG 133 Query: 121 HKNYRNIVSLTQNQSFPLVNRLAAFILLSQEGDLYHEKHTQAAEYLGVSYRHLLYVLAQF 180 KN RNI SLT+NQ++ L NRLA FILLS D+Y EKH+ AA+YLGVSYRHLLYV+AQF Sbjct: 134 GKNARNIRSLTKNQAYTLENRLAGFILLSTATDIYKEKHSHAADYLGVSYRHLLYVMAQF 193 Query: 181 IHDGLLIKSKKGYLIKNRKQLSGLALEMDPE 211 I G L K + Y I +++ L LA +DP+ Sbjct: 194 IEKGFLKKENRIYRIADKQALLELAHVVDPD 224 >UniRef50_A6LU88 Cyclic nucleotide-binding protein n=3 Tax=Clostridium RepID=A6LU88_CLOB8 Length = 230 Score = 177 bits (450), Expect = 3e-43, Method: Composition-based stats. Identities = 63/215 (29%), Positives = 115/215 (53%), Gaps = 7/215 (3%) Query: 1 MSESAFKDCFLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSL 60 ++++ ++ F D+ L+ F +YI +E + +++L G+A++ L NG+ L Sbjct: 14 INKNKLENLFSEDMGRYMELYMFNKNEYICREEEILENMYFLVEGKAKVSKHLENGKSLL 73 Query: 61 IDFFAAPCFIGEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLS 120 I F++ IG+ E + + +VQAI++ +C+ + R +L+ND FL LC LS Sbjct: 74 ISFYSPITIIGDAEFVRNNPTDCSVQAIKDTYCIGIRFDIVRKILINDCKFLVNLCSYLS 133 Query: 121 HKNYRNIVSLTQNQSFPLVNRLAAFILLSQE-------GDLYHEKHTQAAEYLGVSYRHL 173 K + + + N +PL NRLA++I+ E ++ E + + AE LG SYRHL Sbjct: 134 EKLTNSSTNTSINLLYPLENRLASYIIAFSEIENSNTRKIIFRENYIEIAELLGTSYRHL 193 Query: 174 LYVLAQFIHDGLLIKSKKGYLIKNRKQLSGLALEM 208 L + +G+L ++ K Y I++ +L LA ++ Sbjct: 194 SRTLNKLCLEGILKRNNKEYFIQDYDKLLYLAGDL 228 >UniRef50_Q30QZ1 Putative transcriptional regulator, Crp/Fnr family n=1 Tax=Sulfurimonas denitrificans DSM 1251 RepID=Q30QZ1_SULDN Length = 209 Score = 177 bits (450), Expect = 3e-43, Method: Composition-based stats. Identities = 37/198 (18%), Positives = 81/198 (40%), Gaps = 4/198 (2%) Query: 4 SAFKDCFLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDF 63 + + + + T + + EG +P +L+ L +G +LY T ++ + ++ + Sbjct: 12 QNVDEDTIKKIESFTTDHKVSKDNIVFYEGDEPKYLYLLVKGVIKLYKTSSSHKEIVLKY 71 Query: 64 FAAPCFIGEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKN 123 F IGE+ + P +A + L + + + ++ + + +L K Sbjct: 72 FHENELIGEVANFENIPYPATAKAYSDVEFLKVDFEKLKEVIFLNPSLAFNIQTSLIKKI 131 Query: 124 YRNIVSLTQNQSFPLVNRLAAFILLSQEGDLYHEKHTQAAEYLGVSYRHLLYVLAQFIHD 183 ++ N R+A +I + + K+ + AE LGVS L +L F + Sbjct: 132 KNLENIISTNLVLDSKERVAKYIYSHSDD-FFETKNIEIAEILGVSPETLSRILKFFKDN 190 Query: 184 GLLIKSKKGYLIKNRKQL 201 G++ KK +++ L Sbjct: 191 GIINIKKKYI---DKETL 205 >UniRef50_C7VXD9 Transcription regulator n=2 Tax=Enterococcus RepID=C7VXD9_ENTFA Length = 229 Score = 177 bits (450), Expect = 3e-43, Method: Composition-based stats. Identities = 34/212 (16%), Positives = 78/212 (36%), Gaps = 6/212 (2%) Query: 4 SAFKDCFLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDF 63 + + +D F A +I Q L+ + G+ ++Y ++G+ +I Sbjct: 18 QGLSLTEIQFIQSDITEQAFSAGQFIYQAEDILESLYLIQEGKVKVYRLGSSGKEQVIRI 77 Query: 64 FAAPCFIGEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKN 123 F+GE+ L ++ H ++AI + +++ +LL+ +L ++ + Sbjct: 78 LEQGDFVGELALFEEQHYGCFIEAISPTKVCTIQKDNFKRILLSHPQIALELLSEMARRL 137 Query: 124 YRNIVSLTQNQSFPLVNRLAAFILL-----SQEGDLYHEKHTQAAEYLGVSYRHLLYVLA 178 + RL ++L + E + A YLG++ L L Sbjct: 138 DNTERLTAGITTERAETRLIQYLLEENIKQNTEQIKLETTKKELASYLGMTPETLSRYLT 197 Query: 179 QFIHDGLLIK-SKKGYLIKNRKQLSGLALEMD 209 + + L+ + + N +L L ++ Sbjct: 198 KLTRNNLIKQPIPNIIELTNVTELKNLMDKVR 229 >UniRef50_B8IX54 Transcriptional regulator, Crp/Fnr family n=1 Tax=Methylobacterium nodulans ORS 2060 RepID=B8IX54_METNO Length = 229 Score = 177 bits (450), Expect = 3e-43, Method: Composition-based stats. Identities = 32/212 (15%), Positives = 67/212 (31%), Gaps = 10/212 (4%) Query: 4 SAFKDCFLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDF 63 + + + F + +G PS LF ++ G +L G + + F Sbjct: 17 AGLEREPADALLDAATHRQFAEGTTLFHQGDAPSQLFQVSAGLVKLSRVNPEGEQTTLRF 76 Query: 64 FAAPCFIGEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKN 123 A +G + + + P A + L L T+ + Sbjct: 77 MGAGDLVGCVAVFQQSPFPATAIASKPTSVLCWGAAQILDLTRRYPAISANALKTVGDRA 136 Query: 124 YRNIVSLTQNQSFPLVNRLAAFILLSQEG----------DLYHEKHTQAAEYLGVSYRHL 173 I + + + R+A+ +L Y AE GV+Y + Sbjct: 137 REMIDRVAELTDKGVEARIASVLLRLAGQVGRTCLAGVEIAYPVTRRDVAEMTGVTYFTV 196 Query: 174 LYVLAQFIHDGLLIKSKKGYLIKNRKQLSGLA 205 +L + GL+ + ++ ++L+ +A Sbjct: 197 SRILGGWQRQGLVQLGRVRIIVMEPQRLAQIA 228 >UniRef50_A6EDB2 Putative FNR-family transcriptional regulator protein n=1 Tax=Pedobacter sp. BAL39 RepID=A6EDB2_9SPHI Length = 241 Score = 177 bits (449), Expect = 3e-43, Method: Composition-based stats. Identities = 36/211 (17%), Positives = 90/211 (42%), Gaps = 9/211 (4%) Query: 4 SAFKDCFLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDF 63 + + A+ + + D I +EG PS +FY+ +G + Y +GR +I Sbjct: 21 QSIPPEDHEQLCANMTVESYNKGDVIFKEGAVPSGIFYIQKGMVKKYKVDRDGREQIIHV 80 Query: 64 FAAPCFIGEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKN 123 ++ IG ++ ++ P + IE C +P + + +L + ++ ++L LSH+ Sbjct: 81 ASSGELIGYHAILAEERYPDSASTIEACSIAFIPKEDFLEVLGSSSILSQRLLKNLSHEF 140 Query: 124 YRNIVSLTQNQSFPLVNRLAAFIL---------LSQEGDLYHEKHTQAAEYLGVSYRHLL 174 +++ ++A ++ E + + + + G++ +L+ Sbjct: 141 AVLTNNMSAMTQRTAREKVAITLIVLREKYKSMEDNENGIINISRSDLSNMAGIAKENLV 200 Query: 175 YVLAQFIHDGLLIKSKKGYLIKNRKQLSGLA 205 +L +F ++ +L + I + K+L ++ Sbjct: 201 RILKEFKNNNILQTEGRKITINDVKKLVEIS 231 >UniRef50_B3PG67 Cyclic AMP receptor protein n=2 Tax=Gammaproteobacteria RepID=B3PG67_CELJU Length = 232 Score = 177 bits (449), Expect = 4e-43, Method: Composition-based stats. Identities = 31/196 (15%), Positives = 70/196 (35%), Gaps = 4/196 (2%) Query: 7 KDCFLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDFFAA 66 +L ++ + L F +V EG + + L+ + +G + GR +++ Sbjct: 32 PAQYLAELEKSSVLRRFPKNTVLVTEGDESTHLYIIRKGIVSAFLNNDEGRQVNLNYMHE 91 Query: 67 PCFIGEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKNYRN 126 + GE+ LID +V I +C + + LL F L L+ + Sbjct: 92 GEYFGELSLIDSQPRSASVVTITDCEIILVSRASVHELLGKYPDFAMVLLKELTRRVRGL 151 Query: 127 IVSLTQNQSFPLVNRLAAFILLSQEGDL----YHEKHTQAAEYLGVSYRHLLYVLAQFIH 182 ++ + R+++ + + + H A +G S + ++ Q + Sbjct: 152 TDAVKDLALLDVYGRVSSALEKLCDDNKRIHNPKVTHQDIANMVGSSREMVSRIMKQLLI 211 Query: 183 DGLLIKSKKGYLIKNR 198 +++ IK Sbjct: 212 GEYIVQCSGYIEIKKP 227 >UniRef50_Q2IVB4 Transcriptional regulator, Crp/Fnr family n=7 Tax=Rhizobiales RepID=Q2IVB4_RHOP2 Length = 252 Score = 177 bits (449), Expect = 4e-43, Method: Composition-based stats. Identities = 30/212 (14%), Positives = 70/212 (33%), Gaps = 11/212 (5%) Query: 4 SAFKDCFLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDF 63 S D + + + + + +G P LF + G R+ G + Sbjct: 17 SHLSDAEAALLLRTSTVRQIQPGNALFHQGDAPETLFQIVEGLVRVTQINTEGEQITLRI 76 Query: 64 FAAPCFIGEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKN 123 + I + P A+++ LA + + + + ++ Sbjct: 77 MGPGDLCC-VAAIRQQSYPATATALKDTTVLAWRGCTFIDMANQHPAIANNVLAIVGNRA 135 Query: 124 YRNIVSLTQNQSFPLVNRLAAFILLSQ--------EGDLY--HEKHTQAAEYLGVSYRHL 173 + + T+ + R+AA +L +G T A G++Y + Sbjct: 136 HEMLQRATEMTGKCVSQRIAACLLRLSVQAGVTTRDGVHIEAPVTRTDLASMAGLTYFTV 195 Query: 174 LYVLAQFIHDGLLIKSKKGYLIKNRKQLSGLA 205 +L+ + GL+ ++ I N +++ +A Sbjct: 196 SRILSAWQKQGLVKSGRQRLTILNMPRIAEIA 227 >UniRef50_B6IYE4 Nitrite and nitric oxide reductase regulator n=1 Tax=Rhodospirillum centenum SW RepID=B6IYE4_RHOCS Length = 241 Score = 177 bits (449), Expect = 4e-43, Method: Composition-based stats. Identities = 25/214 (11%), Positives = 66/214 (30%), Gaps = 10/214 (4%) Query: 5 AFKDCFLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDFF 64 L V A + + +G + L GR ++ T +G+ ++ F Sbjct: 21 GLPLEALEAVIAAGQTRLVPKGTTVFTQGAKALTCHALLDGRIKIQQTGPDGQQVVVQFV 80 Query: 65 AAPCFIGEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKNY 124 G + + K P + + + L+ L ++ Sbjct: 81 GPGEMYGTLAMFLKSGYPGDAVTLTDSVEIVWSADAMLRLMREHPQIALNTLGMLGNRLE 140 Query: 125 RNIVSLTQNQSFPLVNRLAAFILLSQEG----------DLYHEKHTQAAEYLGVSYRHLL 174 L + + + R+A +L + + AE G + + Sbjct: 141 DLQTRLRELSTQRVERRVAHALLRLAKQAGKPVEAGVEIDFPLSRQDLAEMTGTTLHTVS 200 Query: 175 YVLAQFIHDGLLIKSKKGYLIKNRKQLSGLALEM 208 +++ + G++ ++ ++ +L +A ++ Sbjct: 201 RIVSGWESAGIVEGGRQQVVVARPDRLLAIAEDL 234 >UniRef50_Q2P9V8 Denitrification regulator T n=1 Tax=Thermus thermophilus RepID=Q2P9V8_THETH Length = 217 Score = 177 bits (449), Expect = 4e-43, Method: Composition-based stats. Identities = 39/205 (19%), Positives = 77/205 (37%), Gaps = 5/205 (2%) Query: 5 AFKDCFLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANG-RVSLIDF 63 L + + + + EG+ LF + RG ++Y G + ++ Sbjct: 11 DLAPEDLEALERAAQRRLLGKGEVLFLEGEPVRALFVVKRGLIKVYKLDPEGRKQVVLHV 70 Query: 64 FAAPCFIGEIELIDKDH-EPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHK 122 + E+ L + P + +A+EE LA+P + + LL R L L+ + Sbjct: 71 EGPGRVLAEVALFLERPTYPASAEALEESEVLAIPKERFFQLLEVRPQLARSLIRYLARR 130 Query: 123 NYRNIVSLTQNQSFPLVNRLAAFILLS--QEGDLYHE-KHTQAAEYLGVSYRHLLYVLAQ 179 R + L + + RL F+L +EG + + + A LG + L + Sbjct: 131 QERLLHLLDRLVFHEVRERLCEFLLERLAEEGQGFRLPTNPELAALLGTVPEAVSRNLGE 190 Query: 180 FIHDGLLIKSKKGYLIKNRKQLSGL 204 GL+ + + + + + L L Sbjct: 191 LYRRGLIRLAGRRVEVPDPEALRAL 215 >UniRef50_Q21SN7 Transcriptional regulator, Crp/Fnr family n=1 Tax=Rhodoferax ferrireducens T118 RepID=Q21SN7_RHOFD Length = 233 Score = 176 bits (448), Expect = 4e-43, Method: Composition-based stats. Identities = 32/209 (15%), Positives = 70/209 (33%), Gaps = 9/209 (4%) Query: 4 SAFKDCFLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDF 63 ++ + + + A + G P ++ + G R+ NG+ +++ Sbjct: 22 ASIPQALREALLVNAEIRTIAAGQRLFARGDAPDGIYCVLTGVVRVTGITENGQEAILAM 81 Query: 64 FAAPCFIGEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKN 123 +P + GEI L D + A + L + + +L R L+ K Sbjct: 82 LESPQWFGEIALFDNEPRTHDAWAESDAKLLRVSQRALEKMLSERPDDWRHFGRLLTQKL 141 Query: 124 YRNIVSLTQNQSFPLVNRLAAFILLSQEG---------DLYHEKHTQAAEYLGVSYRHLL 174 V++ P RLA +L +G + Q L +S + + Sbjct: 142 RSVFVAMEDIFLLPPTARLARRLLSMAKGYGAWTDHTSRVISISQEQLGLMLSLSRQTVN 201 Query: 175 YVLAQFIHDGLLIKSKKGYLIKNRKQLSG 203 L + G + + + + + ++L Sbjct: 202 QSLRELEDAGSIHRHRGSIEMVDLRKLEA 230 >UniRef50_A5FBG9 Putative transcriptional regulator, Crp/Fnr family n=1 Tax=Flavobacterium johnsoniae UW101 RepID=A5FBG9_FLAJ1 Length = 227 Score = 176 bits (448), Expect = 4e-43, Method: Composition-based stats. Identities = 38/211 (18%), Positives = 73/211 (34%), Gaps = 9/211 (4%) Query: 4 SAFKDCFLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDF 63 + C + + ++ I EG P+ +FY+ G+ + Y GR +I Sbjct: 14 NELPQCDKDLLEKVMQSKKYVKNQTIFTEGTLPTGIFYIQTGKVKKYKVDNEGREQIIYI 73 Query: 64 FAAPCFIGEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKN 123 + + F G ++ + IE +P + +L N +F R L LS++ Sbjct: 74 YNSGEFFGYTAILSEQAYGDTAVVIENSVISFIPKDDFFNVLNNSVVFSRLLLKCLSYEF 133 Query: 124 YRNIVSLTQNQSFPLVNRLAAFIL---------LSQEGDLYHEKHTQAAEYLGVSYRHLL 174 + + R+A +L + A +G L Sbjct: 134 SVMANLMAVLSQRTVRERVALSLLILHDKYKINDDPKDVFITLSRGDLANMVGTVNETLA 193 Query: 175 YVLAQFIHDGLLIKSKKGYLIKNRKQLSGLA 205 VL F + L+ + + N +QL+ +A Sbjct: 194 RVLHDFKSENLIWMEGRKIQLMNFQQLTHIA 224 >UniRef50_A0P0J2 Putative catabolite gene activator n=2 Tax=Labrenzia aggregata IAM 12614 RepID=A0P0J2_9RHOB Length = 250 Score = 176 bits (448), Expect = 5e-43, Method: Composition-based stats. Identities = 39/209 (18%), Positives = 73/209 (34%), Gaps = 7/209 (3%) Query: 5 AFKDCFLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDFF 64 A D++ L F A + I G + + G R+ +G + Sbjct: 37 ALDAQAREDLARFAFLKKFSAGEVIFTMGTLGQSMMAIAEGTVRVSMFTPSGGEVTLTDL 96 Query: 65 AAPCFIGEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKNY 124 GEI L+D +V+A+ C + L +++ +L D+ KL L + Sbjct: 97 KTGDVFGEIALLDGQERSASVKALTNCTVVVLERRNFLEVLRRDSNLSIKLIELLCQRVR 156 Query: 125 RNIVSLTQNQSFPLVNRLAAFILLSQEGD-------LYHEKHTQAAEYLGVSYRHLLYVL 177 R+ + + L RLA IL + ++ A +G + ++ L Sbjct: 157 RSDERMIEGTFLELPARLAKLILRLSAPVSEERPLKKLSQSQSELAGMIGNTRENVNRCL 216 Query: 178 AQFIHDGLLIKSKKGYLIKNRKQLSGLAL 206 ++ L+ + +R L LA Sbjct: 217 RKWQKANLVNMQDGWLFLLDRPGLMKLAD 245 >UniRef50_B8G033 Transcriptional regulator, Crp/Fnr family n=2 Tax=Desulfitobacterium hafniense RepID=B8G033_DESHD Length = 224 Score = 176 bits (447), Expect = 5e-43, Method: Composition-based stats. Identities = 38/209 (18%), Positives = 75/209 (35%), Gaps = 9/209 (4%) Query: 4 SAFKDCFLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDF 63 S+ D L + + + + EG+ S ++++ G+ +L TL NG ++D+ Sbjct: 14 SSLADEDLLPLLPQFKTRKYRKGQILFIEGEIGSQVYFILEGQVKLSKTLPNGDEQILDW 73 Query: 64 FAAPCFIGEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKN 123 + EI L++ P + ++E L L + +L N L L+ + Sbjct: 74 CGPKDSLAEILLVEPGSYPATAEVLKESTLLVLSNQGMVKILENHPRLAVALIRKLNMRL 133 Query: 124 YRNIVSLTQNQSFPLVNRLAAFILLSQEGDLYH---------EKHTQAAEYLGVSYRHLL 174 N + S LA +L + + A +G S + Sbjct: 134 RMNQEFIRILTSRSTAGILAMLLLRMAKPASSPGEPIYYDATLTNKDLASMIGTSRELVN 193 Query: 175 YVLAQFIHDGLLIKSKKGYLIKNRKQLSG 203 L Q+ G+L ++ I +L+ Sbjct: 194 RTLNQWKKSGVLCLNEDRMEILRPHELAD 222 >UniRef50_D0LG24 Transcriptional regulator, Crp/Fnr family n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LG24_HALO1 Length = 229 Score = 176 bits (447), Expect = 5e-43, Method: Composition-based stats. Identities = 32/211 (15%), Positives = 68/211 (32%), Gaps = 10/211 (4%) Query: 4 SAFKDCFLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDF 63 ++ L ++ L RD I G LF++ GR ++ +G+ + + Sbjct: 18 ASLGPEALARLAERVELREIRRRDVIYLPGDPGGSLFFVNGGRVKISKVTRDGKALTLSY 77 Query: 64 FAAPCFIGEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKN 123 GE L+ +A+E + + LL ++ L+ + Sbjct: 78 CGPSEIFGEGCLVGGGPREEMAEAMENAMVTEVERDQFEQLLREYAHLGFQMTKLLAKRR 137 Query: 124 YRNIVSLTQNQSFPLVNRLAAFILLSQEG----------DLYHEKHTQAAEYLGVSYRHL 173 L + ++LA +L + H + A +G + + Sbjct: 138 LDLENKLETLVFRDVTSKLAELLLNLADEYGVEDSRGTLVALKITHQELANLIGSTRETV 197 Query: 174 LYVLAQFIHDGLLIKSKKGYLIKNRKQLSGL 204 L+QF + + +I + + L L Sbjct: 198 SLTLSQFKKQRYICTEGRKVIISDTESLRAL 228 >UniRef50_Q1GF83 Transcriptional regulator, Crp/Fnr family n=14 Tax=Rhodobacterales RepID=Q1GF83_SILST Length = 222 Score = 176 bits (447), Expect = 6e-43, Method: Composition-based stats. Identities = 37/206 (17%), Positives = 67/206 (32%), Gaps = 3/206 (1%) Query: 4 SAFKDCFLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDF 63 S + + + H D + + G + L+ + G + A GR +D Sbjct: 13 SGASERLRAMLDSQATDVHLETGDVLFERGDEGDALYAIISGALEISTLSAAGRKLSLDM 72 Query: 64 FAAPCFIGEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKN 123 GEI + D A E L + L + + Sbjct: 73 MRPGAIFGEIAMFDPGERTATATAAEPSHLRRLRHRDVLAQLTKHPELAGDMLKLAGQRM 132 Query: 124 YRNIVSLTQNQSFPLVNRLAAFILLSQE---GDLYHEKHTQAAEYLGVSYRHLLYVLAQF 180 L + P+ RLA +L ++ AE++G + + L+ + Sbjct: 133 RWMNTQLNEQVFLPMPVRLARKLLYLTPADGNGQLSLSQSELAEFVGATREAVSKTLSNW 192 Query: 181 IHDGLLIKSKKGYLIKNRKQLSGLAL 206 GL+ S+ G +K+R L+ LA Sbjct: 193 RKAGLIEISRGGLHLKDRGGLAVLAD 218 >UniRef50_A4X9W3 Transcriptional regulator, Crp/Fnr family n=5 Tax=Actinomycetales RepID=A4X9W3_SALTO Length = 230 Score = 176 bits (447), Expect = 6e-43, Method: Composition-based stats. Identities = 38/207 (18%), Positives = 71/207 (34%), Gaps = 5/207 (2%) Query: 4 SAFKDCFLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDF 63 + + V A + + E L L RG ++ T G +++ Sbjct: 19 AGLEPEARQRVIAAAVPRTYRKGQLLFVENDPGESLIVLRRGAVAVFRTAPTGERAVLSV 78 Query: 64 FAAPCFIGEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKN 123 P +GE+ L+D + +AIE+C LAL + L+ ++ L + +L Sbjct: 79 IRPPEVLGEVSLLDASTRSASAEAIEDCAALALSRGAFMELVHSNPRILDAVMRSLGSLI 138 Query: 124 YRNIVSLTQNQSFPLVNRLAAFILLSQEG-----DLYHEKHTQAAEYLGVSYRHLLYVLA 178 R + L R+A ++ +Q AE G S + + + Sbjct: 139 RRLTEQNADHVFLDLPGRVAKTLVRLAGESQAPMITIELNQSQLAEMAGGSRQSVNQAIG 198 Query: 179 QFIHDGLLIKSKKGYLIKNRKQLSGLA 205 F G L + ++ + L A Sbjct: 199 SFASRGWLRTEGRRIVVTDVASLRRRA 225 >UniRef50_Q03NI3 Crp-like transcriptional regulator n=1 Tax=Lactobacillus brevis ATCC 367 RepID=Q03NI3_LACBA Length = 226 Score = 175 bits (446), Expect = 6e-43, Method: Composition-based stats. Identities = 109/213 (51%), Positives = 148/213 (69%) Query: 1 MSESAFKDCFLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSL 60 + S + F TD++A T+L F A+ +IV+E P +++YL +GRA+LY +ANG+V+L Sbjct: 14 ILNSHYLAQFSTDITAQTQLIKFPAQSFIVKESATPEYIYYLVKGRAKLYDVMANGKVTL 73 Query: 61 IDFFAAPCFIGEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLS 120 IDFF PCFIGE+ELI+ +VQAIE+CWCLA+ ++ + LLND +FL+ +C+ L+ Sbjct: 74 IDFFTPPCFIGEMELINPASTLYSVQAIEDCWCLAVSIRDNQSQLLNDPVFLKHVCIYLA 133 Query: 121 HKNYRNIVSLTQNQSFPLVNRLAAFILLSQEGDLYHEKHTQAAEYLGVSYRHLLYVLAQF 180 KN RNI + +QNQSF L RLAAFILL+ Y EKHTQ A YLGVSYRHLLYVLAQF Sbjct: 134 QKNTRNIETASQNQSFSLAERLAAFILLTTYHHHYAEKHTQVAAYLGVSYRHLLYVLAQF 193 Query: 181 IHDGLLIKSKKGYLIKNRKQLSGLALEMDPENK 213 + G L+K K GYL+ N L L+ ++ N+ Sbjct: 194 VKAGYLVKDKPGYLVTNGTALQELSRDVTNSNR 226 >UniRef50_Q0TU94 Cyclic nucleotide-binding domain protein n=8 Tax=Clostridium perfringens RepID=Q0TU94_CLOP1 Length = 223 Score = 175 bits (446), Expect = 6e-43, Method: Composition-based stats. Identities = 54/210 (25%), Positives = 113/210 (53%), Gaps = 1/210 (0%) Query: 1 MSESAFKDCFLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSL 60 +++ F ++ L F ++I ++ ++L++ G+A++Y TL NG+ L Sbjct: 14 INKYELNSIFSQEIMPFLELHMFKKNEHICFMNEELNYLYFFVHGKAKVYKTLPNGKSLL 73 Query: 61 IDFFAAPCFIGEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLS 120 ++F+ IG++ELI K V+A++ C+A+P++ + L D FL + LS Sbjct: 74 LEFYEPVQLIGDLELISKIKANCNVKALKSSLCIAIPIQAVNSIALKDLNFLMYITKNLS 133 Query: 121 HKNYRNIVSLTQNQSFPLVNRLAAFILLSQEGDLYHE-KHTQAAEYLGVSYRHLLYVLAQ 179 +K + V+ + ++PL +LA+++L ++ ++ A+ LG SYRHL VL + Sbjct: 134 NKLAKCSVTSSITITYPLETKLASYLLAMNSNNIIMIDNYSNLADLLGTSYRHLNRVLNK 193 Query: 180 FIHDGLLIKSKKGYLIKNRKQLSGLALEMD 209 + G+++K K I N+++L + ++++ Sbjct: 194 LVEKGIILKDKNEIKILNKEELENICVDLN 223 >UniRef50_B1I2T5 Putative transcriptional regulator, Crp/Fnr family n=1 Tax=Candidatus Desulforudis audaxviator MP104C RepID=B1I2T5_DESAP Length = 217 Score = 175 bits (446), Expect = 8e-43, Method: Composition-based stats. Identities = 29/209 (13%), Positives = 67/209 (32%), Gaps = 11/209 (5%) Query: 6 FKDCFLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDFFA 65 + + + I G+ P +++L G ++Y +G+ + Sbjct: 7 LDSAEIDLLDGVGPTIDYPKGQRIFTSGEVPDRVYFLKAGVVKVYCLTGDGQRQTVALRY 66 Query: 66 APCFIGEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKNYR 125 IG E + + + + + + + LL + F ++ L + Sbjct: 67 QGELIGIAEALYGGERTCCAEVVTDASMVVISKGRFIELLRSRPGFALRVAEILGARLRE 126 Query: 126 NIVSLTQNQSFPLVNRLAAFILLSQE-----------GDLYHEKHTQAAEYLGVSYRHLL 174 ++ + + R+A F+L E H + A +G S ++ Sbjct: 127 AHTMISDLTCYHVPGRVALFLLKLVERCGVTDREPGVRLSLRLTHEELAHMIGTSRSNVT 186 Query: 175 YVLAQFIHDGLLIKSKKGYLIKNRKQLSG 203 +L F G + + I N ++L Sbjct: 187 SILNTFRKHGAIELKGREIRILNPERLRD 215 >UniRef50_A9BMG5 Transcriptional regulator, Crp/Fnr family n=7 Tax=cellular organisms RepID=A9BMG5_DELAS Length = 278 Score = 175 bits (446), Expect = 8e-43, Method: Composition-based stats. Identities = 46/218 (21%), Positives = 78/218 (35%), Gaps = 18/218 (8%) Query: 4 SAFKDCFLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANG---RVSL 60 A + A + A D++ + G P L+ + RG + T A G R +L Sbjct: 55 HALPPELGAQLKALAQPRTLAAGDWLFRRGDPPCGLYAVARGALSISGTAACGEQARTAL 114 Query: 61 IDFFAAPCFIGEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLS 120 + P ++GEI L D QA C L +P + L + L + L+ Sbjct: 115 LTLVEPPMWLGEIALFDGAERTHDAQAATACTVLHVPQAPLQAWLAAHPEHWQVLALLLT 174 Query: 121 HKNYRNIVSLTQNQSFPLVNRLAAFILLSQEG---------------DLYHEKHTQAAEY 165 K +++L ++ P RLA ++ EG Q A Sbjct: 175 DKLRVCLMALEEHTLLPAPQRLARRLVRMAEGFDQWQPDGQGRQRWRRELDVSQEQLARM 234 Query: 166 LGVSYRHLLYVLAQFIHDGLLIKSKKGYLIKNRKQLSG 203 LG+S + +L + G L + + +R+ L Sbjct: 235 LGLSRQTTNQILQELQQAGCLQLRRGKMEVLDRQGLRD 272 >UniRef50_A4CGJ8 Transcriptional regulatory protein n=9 Tax=Flavobacteria RepID=A4CGJ8_9FLAO Length = 252 Score = 175 bits (446), Expect = 8e-43, Method: Composition-based stats. Identities = 34/211 (16%), Positives = 79/211 (37%), Gaps = 8/211 (3%) Query: 5 AFKDCFLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDFF 64 A L VS + I EG++ + ++ + G ++L NG+ ++ Sbjct: 41 AMSKEELKAVSDSKVSRKIKKGEIIFDEGEKLAGVYCVRDGVSKLSKLSENGKDQIVKLA 100 Query: 65 AAPCFIGEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKNY 124 + +G+ ++ ++ + A+ + +P + L + F ++ T++H Sbjct: 101 SKGQVLGQRSVVAEESANLSATAVNDMEICFIPREAITDTLHKNPEFSYEVLQTMAHDLR 160 Query: 125 RNIVSLTQNQSFPLVNRLAAFILLSQEGD--------LYHEKHTQAAEYLGVSYRHLLYV 176 + + R+A +L +E L A +G + + + Sbjct: 161 EADDVIVNMSQKSVKQRIAQALLYLRENFGEDGEGYLLLVLSREDIASVVGTATESCIRM 220 Query: 177 LAQFIHDGLLIKSKKGYLIKNRKQLSGLALE 207 L++ +GL+ S K I + ++L LA Sbjct: 221 LSELRKEGLIKTSGKRLSITDARKLKSLADG 251 >UniRef50_Q7M956 PUTATIVE TRANSCRIPTIONAL REGULATOR n=1 Tax=Wolinella succinogenes RepID=Q7M956_WOLSU Length = 217 Score = 175 bits (446), Expect = 8e-43, Method: Composition-based stats. Identities = 34/200 (17%), Positives = 80/200 (40%), Gaps = 1/200 (0%) Query: 4 SAFKDCFLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDF 63 SA ++ L + + ++ + + + EG++P+ L+ L +G ++Y T G +I + Sbjct: 14 SALEEERLDYLQSFSKKLSYQEGNILFFEGEKPNHLYVLLKGILKIYKTDPRGNEVVIHY 73 Query: 64 FAAPCFIGEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKN 123 P + E+ ++ + P + + LA+ + L + + +L+ K Sbjct: 74 IQPPSLVAELVNLEGMNYPASAIFESDGEILAIDYAIFERDFLKNGDMAFYIIKSLTRKI 133 Query: 124 YRNIVSLTQNQSFPLVNRLAAFILLSQEGDLYHEKHTQAAEYLGVSYRHLLYVLAQFIHD 183 +T N + +R+A F E L + A L + L ++ + + Sbjct: 134 KALEEVITSNLTMDTTSRVAKFFYDKSEE-LPCLSQRKIASILNTTPETLSRIVKKLKEE 192 Query: 184 GLLIKSKKGYLIKNRKQLSG 203 ++ K + N+ +L Sbjct: 193 KIITVEKGSIIEVNKGRLKE 212 >UniRef50_Q1J275 Transcriptional regulator, Crp/Fnr family n=3 Tax=Deinococcus RepID=Q1J275_DEIGD Length = 254 Score = 175 bits (445), Expect = 8e-43, Method: Composition-based stats. Identities = 29/214 (13%), Positives = 75/214 (35%), Gaps = 11/214 (5%) Query: 4 SAFKDCFLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDF 63 + + L V+A T + + I + L+++ G ++ NG+ +++ Sbjct: 41 ADLELAELEQVAAATPYRSYRPGEVIYRMDDPADALYFVRSGLVKISKLFPNGKEAILGV 100 Query: 64 FAAPCFIGEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKN 123 GE+ L ++ P +A+E + LP + LL KL ++ + Sbjct: 101 IGQHDTFGELLLQPEERRPTQAEALERTTLIVLPRAELQKLLDTKPALAMKLIRLMAARL 160 Query: 124 YRNIVSLTQNQSFPLVNRLAAFILLSQEGD----------LYHEKHTQAAEYLGVSYRHL 173 + ++ R+A+ + A +G + + Sbjct: 161 FEAQSWTATVSAYSAPERVASLLYRLAREFGRPHAQGVELALKLNQEDIARMVGATRETV 220 Query: 174 LYVLAQFIHDGLLIKSKKGYLIKNRKQLSGLALE 207 + L++ +G + +++ +++ +L E Sbjct: 221 SHSLSKLKQEGAISRARTPMVVR-LDELKRYLEE 253 >UniRef50_A4BIJ9 Transcriptional regulator Dnr n=1 Tax=Reinekea blandensis MED297 RepID=A4BIJ9_9GAMM Length = 235 Score = 175 bits (445), Expect = 8e-43, Method: Composition-based stats. Identities = 33/212 (15%), Positives = 76/212 (35%), Gaps = 5/212 (2%) Query: 4 SAFKDCFLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDF 63 S+ + L+ + + R+ + ++ + +Y++ G RLY T +G ++D Sbjct: 18 SSLNEVQLSTLLRNATRRTLDEREVLFRQSEPADRFYYVSHGIIRLYRTSPSGHEKVVDI 77 Query: 64 FAAPCFIGEIELID-KDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHK 122 E + + ++ P A + + + LL +D L +S + Sbjct: 78 VREGQCFAEAIMFNAQERYPVTADAQVASEVIGIENGSFHGLLKSDNELCMALMRQMSIR 137 Query: 123 NYRNIVSLTQNQSFPLVNRLAAFILLS----QEGDLYHEKHTQAAEYLGVSYRHLLYVLA 178 + + + ++RL ++L + + A LG+ +L Sbjct: 138 LHSQLNEIENLSLQNALHRLVNYLLHDLQSPNDTLTFDIPKRLIASQLGIQPETFSRLLR 197 Query: 179 QFIHDGLLIKSKKGYLIKNRKQLSGLALEMDP 210 + + L+ S + I +R L L + P Sbjct: 198 KLEDNQLIQVSNRDLKILDRDGLYQLTRDNQP 229 >UniRef50_Q03H18 Crp-like transcriptional regulator n=7 Tax=Lactobacillales RepID=Q03H18_PEDPA Length = 227 Score = 175 bits (445), Expect = 9e-43, Method: Composition-based stats. Identities = 31/203 (15%), Positives = 66/203 (32%), Gaps = 6/203 (2%) Query: 5 AFKDCFLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDFF 64 V + A + QEG + L + G+ +++ T NG+ L+ Sbjct: 19 NLNIEQTAVVESIVHHQQLPANSVLYQEGNRIDALSIIANGQIKVFRTAENGKEQLLYLL 78 Query: 65 AAPCFIGEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKNY 124 A GE L ++ + + ++ LL + TL + Sbjct: 79 QAGDINGEAALFNQTEHNSTAITLTPTTVCTINRADFQNLLTRYPQIGMNVMNTLGSRLL 138 Query: 125 RNIVSLTQNQSFPLVNRLAAFILL-----SQEGDLYHEKHTQAAEYLGVSYRHLLYVLAQ 179 T++ + + +RLA +++ +Q K+ A LG + + Q Sbjct: 139 ELERQTTKSNTESVASRLADYLVETASALNQNPVRLPLKNKDLATLLGTTPETISRYFKQ 198 Query: 180 FIHDGLL-IKSKKGYLIKNRKQL 201 + L+ + + + L Sbjct: 199 WHEQHLITKLERHQIKLNDVDNL 221 >UniRef50_B6R2R5 Cyclic nucleotide-binding protein n=1 Tax=Pseudovibrio sp. JE062 RepID=B6R2R5_9RHOB Length = 230 Score = 175 bits (445), Expect = 9e-43, Method: Composition-based stats. Identities = 28/210 (13%), Positives = 68/210 (32%), Gaps = 7/210 (3%) Query: 6 FKDCFLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDFFA 65 + + I + + F + G +++ ++G +++ F Sbjct: 13 LSTEAREQLLRGATKKSVSRGEMIFFQDDKADAFFIVLEGWVKVFRATSSGDEAVVGVFT 72 Query: 66 APCFIGEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKNYR 125 E + P + +A+ + L +P+ H + D + +LS ++ Sbjct: 73 RGQTFAEGAAFTNSNYPASGEAVTDSVVLCIPVAHLANSIAADPNIALAMMSSLSMHLHQ 132 Query: 126 NIVSLTQNQSFPLVNRLAAFILLSQEG------DLYHEKHTQAAEYLGVSYRHLLYVLAQ 179 ++ + ++ R+A F+L + A LG+ L + Sbjct: 133 LVLQIEGLKTHTGAQRVAEFLLNLSSEPAGSCTLVLPYDKALIAGRLGMKPESLSRAFQK 192 Query: 180 FIHDGLLIKSKKGYLIKNRKQLSGLALEMD 209 G+ +K + I N + L L + Sbjct: 193 LKSYGVEVKQNRAI-ISNVQALRTLVEQER 221 >UniRef50_B3QXY7 Transcriptional regulator, Crp/Fnr family n=1 Tax=Chloroherpeton thalassium ATCC 35110 RepID=B3QXY7_CHLT3 Length = 229 Score = 175 bits (444), Expect = 1e-42, Method: Composition-based stats. Identities = 32/208 (15%), Positives = 72/208 (34%), Gaps = 10/208 (4%) Query: 6 FKDCFLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDFFA 65 D L + ++L + D ++ E + + L+ + G ++ T + + ++ A Sbjct: 19 LTDDELKSIIERSQLLSYKKDDVVLFESELGNALYIILDGFVKISRTNEDYKEVILAILA 78 Query: 66 APCFIGEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKNYR 125 F GE+ ++D AI + L + + + LL + L + + + Sbjct: 79 ERDFFGEMSVLDGAVRSADAIAISKVHALKIAAEDFLDLLEKNPKISLALLREMVSRLRK 138 Query: 126 NIVSLTQNQSFPLVNRLAAFILLSQEG----------DLYHEKHTQAAEYLGVSYRHLLY 175 + + ++A+ IL + A Y S + Sbjct: 139 TDHQIKSISLSDAIGKVASVILRLANDVGRQRRGRVEIDNFASQQEMANYAATSRETISR 198 Query: 176 VLAQFIHDGLLIKSKKGYLIKNRKQLSG 203 VL+ F DGL+ + +I + + Sbjct: 199 VLSMFERDGLIERDMNKIIITDFEAFKQ 226 >UniRef50_D0LJM6 Transcriptional regulator, Crp/Fnr family n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LJM6_HALO1 Length = 251 Score = 175 bits (444), Expect = 1e-42, Method: Composition-based stats. Identities = 36/202 (17%), Positives = 67/202 (33%), Gaps = 10/202 (4%) Query: 4 SAFKDCFLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDF 63 +A + D+S + A +V + + +F + GR ++ NGR + Sbjct: 35 AALPISAIEDLSQRVAVRKVTAHHTVVTQDEPGETMFLIMSGRIKVVIFGENGREVTLSI 94 Query: 64 FAAPCFIGEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKN 123 GE+ L D + A+E C LAL + L N L ++ + Sbjct: 95 LRPGDAFGEMSLFDGEARSANCVALEACTLLALSREDLLRHLANHPRTTLNLLGEMARRL 154 Query: 124 YRNIVSLTQNQSFPLVNRLAAFILLSQEGDLY----------HEKHTQAAEYLGVSYRHL 173 R S+ Q + RL ++ + + A +G + Sbjct: 155 RRADESIAQLALCDVNERLVHQLVSLAREEGVDAPEGVLVRRRPTQQELANMIGSCRETI 214 Query: 174 LYVLAQFIHDGLLIKSKKGYLI 195 Q DGL+I + ++ Sbjct: 215 SRAFNQLARDGLIIPRGRAMVV 236 >UniRef50_C7PAL9 Transcriptional regulator, Crp/Fnr family n=2 Tax=Sphingobacteriales RepID=C7PAL9_CHIPD Length = 352 Score = 175 bits (444), Expect = 1e-42, Method: Composition-based stats. Identities = 37/202 (18%), Positives = 81/202 (40%), Gaps = 8/202 (3%) Query: 11 LTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDFFAAPCFI 70 L + + + + I QEG +P+ L+++ +GR + Y +G+ ++ ++A F+ Sbjct: 149 LKTLMEEGNTDRYKKKQLIYQEGNRPTSLYFIQKGRVKTYKVNNDGKELAVNLYSAGEFL 208 Query: 71 GEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKNYRNIVSL 130 G + L++ + +A+E C A+P + + L+ N+ ++ L+ L Sbjct: 209 GYVALLEGSNYHENAEALEACELTAIPREDFETLINNNREVAQQFIRLLAKNITEKEQQL 268 Query: 131 TQNQSFPLVNRLAAFILLS--------QEGDLYHEKHTQAAEYLGVSYRHLLYVLAQFIH 182 L ++A +L + A G + ++ L F Sbjct: 269 LHLAYSSLRKKVAEALLFLKKKYHHVTDQPFSIDISRENLATIAGTATESMIRTLGDFRD 328 Query: 183 DGLLIKSKKGYLIKNRKQLSGL 204 + LL + I N ++L+ L Sbjct: 329 EKLLEIKQGVITILNEQKLANL 350 >UniRef50_A1ARS9 Transcriptional regulator, Crp/Fnr family n=3 Tax=Desulfuromonadales RepID=A1ARS9_PELPD Length = 238 Score = 175 bits (444), Expect = 1e-42, Method: Composition-based stats. Identities = 35/203 (17%), Positives = 71/203 (34%), Gaps = 11/203 (5%) Query: 4 SAFKDCFLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDF 63 + D L ++ + R + ++ E ++++ + G+ R+ +GR ++ Sbjct: 21 AGLSDAELQELESQIRRRQISRNEVVLFEEDTANYMYIVYSGKVRVVKINVDGREQILAI 80 Query: 64 FAAPCFIGEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKN 123 F GE+ L+D P V A+E+ L + + N+ R + L + Sbjct: 81 HRKRDFFGEMSLLDGKTSPATVIAMEDSEIGLLEKDDFDRFIENNDKMRRHIIDMLCSQL 140 Query: 124 YRNIVSLTQNQSFPLVNRLAAFILLSQE----------GDLYHEKHTQAAEYLGVSYRHL 173 + + R+ A + Q+ H Q A Y V+ + Sbjct: 141 REAWMMIRIMSFDNAEKRIMAVLDRLQDLYGIGDDRGRIINVKLTHQQIASYASVTRETV 200 Query: 174 LYVLAQFIHDGLLIK-SKKGYLI 195 VL Q + L+ K L+ Sbjct: 201 TRVLNQMKSEELIRVLEGKTILL 223 >UniRef50_C9R9Q5 Transcriptional regulator, Crp/Fnr family n=2 Tax=Clostridia RepID=C9R9Q5_AMMDK Length = 229 Score = 175 bits (444), Expect = 1e-42, Method: Composition-based stats. Identities = 30/208 (14%), Positives = 68/208 (32%), Gaps = 11/208 (5%) Query: 6 FKDCFLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLI-DFF 64 + + + + + + ++ L +G ++Y ANGR + Sbjct: 18 LNEKEKELLRSLGTTVSYPKGHILWAPEEIADRVYLLEKGWVKIYRLTANGREVTVGAIR 77 Query: 65 AAPCFIGEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKNY 124 IG E + AI + + + LL + L K+C L+ + Sbjct: 78 NPGELIGLAEALYHGRRTCFAGAITDVTLTIVSKNDFVELLTENHLLALKVCKILAARMR 137 Query: 125 RNIVSLTQNQSFPLVNRLAAFILLSQE----------GDLYHEKHTQAAEYLGVSYRHLL 174 + + + + RLA +L E H + A +G + + + Sbjct: 138 EAEALVHELVCWQVPGRLALLLLKMGESCGIRDEKGIHIELRLTHEELAGMIGTTRQTVT 197 Query: 175 YVLAQFIHDGLLIKSKKGYLIKNRKQLS 202 + F +G + + I + ++L+ Sbjct: 198 SLSNTFKKEGSIEMVGRKITICDPQKLA 225 >UniRef50_Q2J6W1 Transcriptional regulator, Crp/Fnr family n=4 Tax=Frankia RepID=Q2J6W1_FRASC Length = 263 Score = 174 bits (443), Expect = 2e-42, Method: Composition-based stats. Identities = 35/207 (16%), Positives = 69/207 (33%), Gaps = 5/207 (2%) Query: 6 FKDCFLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDFFA 65 ++ L ++ F + EG+ L + GR ++ +GR +++ Sbjct: 57 LQEEDLLRLATRAVTRRFRRGQVVFTEGEPADTLLVVASGRLKVLTKADDGRDHVLNIVG 116 Query: 66 APCFIGEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKNYR 125 +GE+ +++ V+A+E L L L+ +L L R Sbjct: 117 PRETLGELNIVEGGTRSAGVEALEPSTALVLDRTAVWELVRERPAVAEQLIRALVAHVRR 176 Query: 126 NIVSLTQNQSFPLVNRLAAFILLSQEG-----DLYHEKHTQAAEYLGVSYRHLLYVLAQF 180 + L R+A +LL T+ A LG S + + L +F Sbjct: 177 LTGANADLVFLDLPRRVAKLLLLRMREAGRPVIELGLTQTEIASLLGGSRQSVNQALREF 236 Query: 181 IHDGLLIKSKKGYLIKNRKQLSGLALE 207 ++ + I +L A + Sbjct: 237 ERRTWILSEGQTITILQVDRLRRFAGD 263 >UniRef50_A9NH90 Transcriptional regulator, Crp/Fnr family n=1 Tax=Acholeplasma laidlawii PG-8A RepID=A9NH90_ACHLI Length = 231 Score = 174 bits (443), Expect = 2e-42, Method: Composition-based stats. Identities = 37/198 (18%), Positives = 69/198 (34%), Gaps = 7/198 (3%) Query: 4 SAFKDCFLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDF 63 + V H+ A I G+ + ++RG+ R+Y +GR LI Sbjct: 19 NTLTSEQRQLVFKLIEHRHYSAGQMIYSPGESAGSIHIISRGKVRIYRLSESGREQLIRL 78 Query: 64 FAAPCFIGEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKN 123 F GE+ L + +++E+ + ++ LL + K+ L+ + Sbjct: 79 LLPGEFTGELALFKEGIYEAYAESLEDTKICMIHHDDFKNLLKSYPAISVKMLSVLAKRL 138 Query: 124 YRNIVSLTQNQSFPLVNRLAAFILLSQEGDL-------YHEKHTQAAEYLGVSYRHLLYV 176 + T + RL F++ S + A YLG + L Sbjct: 139 SISEQQSTWMSTETSKERLINFLIRSATLNKQGEMVVYLPMPKKDLASYLGTTPETLSRQ 198 Query: 177 LAQFIHDGLLIKSKKGYL 194 DG++ +S K Y+ Sbjct: 199 FTILKKDGVITQSSKNYV 216 >UniRef50_Q2W664 cAMP-binding protein-catabolite gene activator and regulatory subunit of cAMP-dependent protein kinase n=2 Tax=Alphaproteobacteria RepID=Q2W664_MAGSA Length = 242 Score = 174 bits (442), Expect = 2e-42, Method: Composition-based stats. Identities = 42/212 (19%), Positives = 78/212 (36%), Gaps = 10/212 (4%) Query: 4 SAFKDCFLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDF 63 + D V A + + H A + Q+G +F + G+ R Y T +GR + + Sbjct: 30 AGLSDEEYAQVLAVSSVQHHAAGATVFQQGDHHDGIFIILAGQVRSYYTGPSGREITLAY 89 Query: 64 FAAPCFIGEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKN 123 ++ F+G E+ + QAI L + + R LL L L HK Sbjct: 90 WSPGNFVGGPEIFGGSPHMWSGQAIRPTQVLHVRGRELRQLLDRLPRLTLALVEALVHKG 149 Query: 124 YRNIVSLTQNQSFPLVNRLAAFIL--------LSQEGDLY--HEKHTQAAEYLGVSYRHL 173 + + RLA +L + +G A+ +G + + + Sbjct: 150 KAYSALIHMLGTRSAAERLAQLLLLMANLDGRRTADGIAISRTLTQEDLAKMVGSTRQWV 209 Query: 174 LYVLAQFIHDGLLIKSKKGYLIKNRKQLSGLA 205 L +F G++ + LI++ ++L A Sbjct: 210 TTTLERFREQGMVDVTPTRILIRDEERLRRFA 241 >UniRef50_B1YHB5 Cyclic nucleotide-binding protein n=2 Tax=Exiguobacterium RepID=B1YHB5_EXIS2 Length = 222 Score = 174 bits (442), Expect = 2e-42, Method: Composition-based stats. Identities = 47/209 (22%), Positives = 91/209 (43%), Gaps = 2/209 (0%) Query: 1 MSESAFKDCFLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSL 60 + D F + + F A D++ ++G ++ L G+ ++ A G+ + Sbjct: 10 LDRFQLTDVFAGGLREHLQPVAFQAGDWLCRQGDAADRMYLLLEGKLKITHMSATGKRLV 69 Query: 61 IDFFAAPCFIGEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLS 120 + F +G+IE + + V+A+ +++ ++ LR L T++ Sbjct: 70 LSFKHPFDLVGDIEYVRRTPLMNTVEAVTPVKAVSISYAALEQKGADNPALLRFLLETIT 129 Query: 121 HKNYRNIVSLTQNQSFPLVNRLAAFILLS-QEGDLYHEK-HTQAAEYLGVSYRHLLYVLA 178 K S++ N +P+ RLA+++L E AA+ +G SYRHL VL Sbjct: 130 MKFELKSHSMSFNLLYPVEVRLASYLLSMTPETPTLPVSDLVDAADLIGTSYRHLNRVLR 189 Query: 179 QFIHDGLLIKSKKGYLIKNRKQLSGLALE 207 QF D L+ ++ + I +R+ L+ E Sbjct: 190 QFSQDNLIERTNRTITIIDREGLTERVGE 218 >UniRef50_UPI0001B46169 Crp/FNR family transcriptional regulator n=1 Tax=Mycobacterium intracellulare ATCC 13950 RepID=UPI0001B46169 Length = 219 Score = 174 bits (442), Expect = 2e-42, Method: Composition-based stats. Identities = 35/208 (16%), Positives = 62/208 (29%), Gaps = 10/208 (4%) Query: 18 TRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDFFAAPCFIGEIELID 77 F I +G L+ + G + GR + GE+ + D Sbjct: 1 MYTCEFRPGQTIFAQGDPGDRLYLIAEGTVTISLRDPAGRTGVRAILGPADIFGELAVFD 60 Query: 78 KDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKNYRNIVSLTQNQSFP 137 A+ E L L R + D +L L+ + L + S Sbjct: 61 PAPRACTATALTEVRALWLDRASLRASMARDPALAEQLLRALTRRVRAAERQLVEMVSSD 120 Query: 138 LVNRLAAFILLS------QEGDLYH----EKHTQAAEYLGVSYRHLLYVLAQFIHDGLLI 187 + R+A +L +EG + A+ +G + L F G + Sbjct: 121 VNARVARQLLALGRRFGTREGGALRVAHELSQDELAQLVGADRVSVNKALGSFTTRGWIS 180 Query: 188 KSKKGYLIKNRKQLSGLALEMDPENKFS 215 K +I N L+ A ++ + Sbjct: 181 LRGKTVVIINPDALARRAGDVGGADGTR 208 >UniRef50_A3IBY0 DNA-binding transcriptional activator of stationary phase nitrogen survival n=3 Tax=Firmicutes RepID=A3IBY0_9BACI Length = 220 Score = 174 bits (442), Expect = 2e-42, Method: Composition-based stats. Identities = 89/209 (42%), Positives = 127/209 (60%), Gaps = 1/209 (0%) Query: 1 MSESAFKDCFLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSL 60 + + D F D+ + F ++I QEG P L+Y+ G+A+LY T NG+VSL Sbjct: 13 LEKYPIHDFFSFDIDPYLEVCEFDKGEWIFQEGSFPETLYYMIEGKAKLYMTHKNGKVSL 72 Query: 61 IDFFAAPCFIGEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLS 120 I++ P F+GEIEL+++ + +Q + + C ++ + LL D LFLR+LCV L Sbjct: 73 IEYLEGPLFMGEIELLNEARYTKGIQTVTKTICYSITQS-CKEKLLADVLFLRRLCVFLG 131 Query: 121 HKNYRNIVSLTQNQSFPLVNRLAAFILLSQEGDLYHEKHTQAAEYLGVSYRHLLYVLAQF 180 K + TQNQ++P +RLAAFI LS + +Y EKHT+ EYLGVSYRHLLYVLAQF Sbjct: 132 EKATKMTSKYTQNQAYPFESRLAAFIQLSADQGVYKEKHTEICEYLGVSYRHLLYVLAQF 191 Query: 181 IHDGLLIKSKKGYLIKNRKQLSGLALEMD 209 + +L K K GY I + K+L+ LA E+ Sbjct: 192 CEEKILEKRKTGYHIIDEKRLAQLAQEIQ 220 >UniRef50_A6Q5Z4 Transcriptional regulator, Crp/Fnr family n=1 Tax=Nitratiruptor sp. SB155-2 RepID=A6Q5Z4_NITSB Length = 212 Score = 174 bits (442), Expect = 2e-42, Method: Composition-based stats. Identities = 37/201 (18%), Positives = 79/201 (39%), Gaps = 1/201 (0%) Query: 4 SAFKDCFLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDF 63 + D + + L + + EG+ L LT+G ++Y + G ++ Sbjct: 11 NNLDDKQFQRLKEISVLKQYKKGSIVFYEGEIAKHLILLTKGILQIYKSDHKGNKIVLHV 70 Query: 64 FAAPCFIGEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKN 123 F P I EI ++ P + + + + L + K + L + + +L++K Sbjct: 71 FYPPNLIAEIVNFEQIPYPASGEFLTDGELLLIDYKIFEEEFLKNPEIAFTIIKSLTNKI 130 Query: 124 YRNIVSLTQNQSFPLVNRLAAFILLSQEGDLYHEKHTQAAEYLGVSYRHLLYVLAQFIHD 183 +T + R+A FI +E K + A L ++ L ++++F Sbjct: 131 RYLEHVITNDLVLSSTARVAKFIYEHEEE-FMDLKKNEIATLLNITPETLSRIISKFKKL 189 Query: 184 GLLIKSKKGYLIKNRKQLSGL 204 GLL K++ Y + +++ Sbjct: 190 GLLEKNRSQYRVLKKEEFRSF 210 >UniRef50_C8N8N0 Crp/Fnr family transcriptional regulator n=1 Tax=Cardiobacterium hominis ATCC 15826 RepID=C8N8N0_9GAMM Length = 220 Score = 173 bits (441), Expect = 3e-42, Method: Composition-based stats. Identities = 34/208 (16%), Positives = 73/208 (35%), Gaps = 8/208 (3%) Query: 4 SAFKDCFLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDF 63 + ++ + A + + Q+ + F + G RLY + +G+ + Sbjct: 12 APLSPAERERLTRHQHRRRYSAGSMVFTKNQKTTDFFIVLSGTVRLYFSAPDGKEKTVKL 71 Query: 64 FAAPCFIGEIELI-DKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHK 122 F+ GE + D P A E+ L + + +R +LL + + T++ Sbjct: 72 FSRGQSFGEALMFMRHDTYPANAIATEDTELLVISNREFRDILLKNVELCLAIMGTMAEY 131 Query: 123 NYRNIVSLTQNQSFPLVNRLAAFILLSQEGDL-------YHEKHTQAAEYLGVSYRHLLY 175 + F RL ++ +G+ AEYL + L Sbjct: 132 VQILSSQIEMLSVFDARTRLLHYLRDHMQGERKNGTLYPLDINKKDLAEYLAIRPETLSR 191 Query: 176 VLAQFIHDGLLIKSKKGYLIKNRKQLSG 203 +L Q + +L+ ++G + + +L Sbjct: 192 LLKQLEQEAVLVWDQRGVRVHDWAKLKD 219 >UniRef50_D2LTM0 Transcriptional regulator, Crp/Fnr family n=1 Tax=Bacillus cellulosilyticus DSM 2522 RepID=D2LTM0_BACS4 Length = 217 Score = 173 bits (441), Expect = 3e-42, Method: Composition-based stats. Identities = 35/200 (17%), Positives = 76/200 (38%), Gaps = 3/200 (1%) Query: 5 AFKDCFLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDFF 64 + L+ + +R +D + EG+Q S+++ L G + +G SLI+ Sbjct: 16 GLDEKALSSLLKMSREKQLKDKDILFLEGEQKSYIYVLGEGTILISKLTEDGEESLINVL 75 Query: 65 AAPCFIGEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKNY 124 + D P + +A ++ LA+P+ + L+ ++ ++ K Sbjct: 76 SEGEVFPHTGFFDHSPYPGSAKAKKDVIVLAIPINGFEKLIRTYPELSFRVIQVMNKKII 135 Query: 125 RNIVSLTQNQSFPLVNRLAAFI--LLSQEGDLYHEKHTQAAEYLGVSYRHLLYVLAQFIH 182 L + S + RL I L +GD H + +G + + L ++ Sbjct: 136 YLQKKLNELLSLNVEARLIGAIAHLQETQGDTIRLTHQEMGNIIGSTRETVSRQLKKWEK 195 Query: 183 DGLLIKSKKGYLI-KNRKQL 201 + + K ++ K+ +L Sbjct: 196 EQYVDIKKDRIVLKKDFNEL 215 >UniRef50_A8FDX9 Possible Crp family transcriptional regulator n=5 Tax=Bacillales RepID=A8FDX9_BACP2 Length = 226 Score = 173 bits (440), Expect = 3e-42, Method: Composition-based stats. Identities = 47/208 (22%), Positives = 94/208 (45%), Gaps = 2/208 (0%) Query: 1 MSESAFKDCFLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSL 60 M + F + + L + + + +G + +L+ L +G+ +++ T G+ + Sbjct: 14 MKAHQLESVFHQKLMSHVSLCRYEQGELVCSKGDKREYLYLLVKGKLKIFTTTKEGKTFI 73 Query: 61 IDFFAAPCFIGEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLS 120 + F IG+IE + + V+A+ E L + + +D L L ++ Sbjct: 74 LSFKHPLEAIGDIEYVQQTDMVNTVEAVTEVHMLRVSHQALMRHAKDDPRVLNFLLKGIT 133 Query: 121 HKNYRNIVSLTQNQSFPLVNRLAAFILL--SQEGDLYHEKHTQAAEYLGVSYRHLLYVLA 178 +K Y L+ + +P+ RLA+++L + + + T AA +G SYRH+ V+ Sbjct: 134 NKFYTKSNDLSFHLLYPVEVRLASYLLSVVTSDESASALRLTDAASLIGTSYRHINRVIQ 193 Query: 179 QFIHDGLLIKSKKGYLIKNRKQLSGLAL 206 QF GL+ + + I +RK L +A Sbjct: 194 QFCEKGLIERRRGNITISDRKGLLEIAE 221 >UniRef50_D2QLW5 Transcriptional regulator, Crp/Fnr family n=1 Tax=Spirosoma linguale DSM 74 RepID=D2QLW5_9SPHI Length = 350 Score = 173 bits (440), Expect = 4e-42, Method: Composition-based stats. Identities = 39/198 (19%), Positives = 76/198 (38%), Gaps = 6/198 (3%) Query: 12 TDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDFFAAPCFIG 71 + AD +L + ++ +G +P+ L++L GR ++ T +G+ + D F FIG Sbjct: 150 QSLVADRKLHRVPKKQFVYSDGDEPTRLYFLKNGRVKIVRTSHDGKELVTDLFGPNSFIG 209 Query: 72 EIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKNYRNIVSLT 131 L++ + + +++ + +P + +L R+ L+ L Sbjct: 210 YRALLENTNYTDSAVTLDDSELIYIPKNEFLHILGTQPEAGRQFVHLLAGHVNGKEEQLL 269 Query: 132 QNQSFPLVNRLAAFILLS--QEGDL----YHEKHTQAAEYLGVSYRHLLYVLAQFIHDGL 185 L R+A +L A +G + L+ +L +F HDGL Sbjct: 270 SMAYSSLRRRVADTLLRLGTSPDGEPVPPIQLSRDDLAAVIGTATESLIRILTEFKHDGL 329 Query: 186 LIKSKKGYLIKNRKQLSG 203 + S G I +L Sbjct: 330 IEMSSAGIRIVEPDKLRR 347 >UniRef50_B2UJ25 Transcriptional regulator, Crp/Fnr family n=10 Tax=Burkholderiaceae RepID=B2UJ25_RALPJ Length = 243 Score = 173 bits (440), Expect = 4e-42, Method: Composition-based stats. Identities = 47/212 (22%), Positives = 80/212 (37%), Gaps = 9/212 (4%) Query: 6 FKDCFLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDFFA 65 + + A + + Q G P L+ + G R+ AT A+GR +L+ Sbjct: 29 LGATLQDALIDIAAVRRLGAGEILFQRGDAPDGLYCVVEGTIRIGATSADGREALLAVLE 88 Query: 66 APCFIGEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKNYR 125 + GEI + D+ +A L +P LL L + L+HK Sbjct: 89 PVNWFGEIGVFDRQPRTHDARADGHTTLLHMPQAALIALLDGSPALLHAFALLLTHKLRL 148 Query: 126 NIVSLTQNQSFPLVNRLAAFILLSQEG---------DLYHEKHTQAAEYLGVSYRHLLYV 176 + L + P R+A +LL +G + H Q A+ L +S + + V Sbjct: 149 TFIVLEETALLPAPVRVARRLLLMADGYGDLRLGTRRVLHVPQEQLAQLLSLSRQTVNQV 208 Query: 177 LAQFIHDGLLIKSKKGYLIKNRKQLSGLALEM 208 L +F G+L + + + L LA E+ Sbjct: 209 LKEFEAHGILRLAYGEIELLDFAGLHRLAYEV 240 >UniRef50_C7NKH0 cAMP-binding protein n=1 Tax=Kytococcus sedentarius DSM 20547 RepID=C7NKH0_KYTSD Length = 223 Score = 173 bits (439), Expect = 4e-42, Method: Composition-based stats. Identities = 39/209 (18%), Positives = 68/209 (32%), Gaps = 7/209 (3%) Query: 4 SAFKDCFLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDF 63 + V++ A ++G++ LF L G +L A+G ++ Sbjct: 14 AGLDPEAQQQVASCAHPEMVEAGHDFYRQGEEVGQLFVLHEGTVKLTHGRADGTQRIVRT 73 Query: 64 FAAPCFIGEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKN 123 A +GE L+ AIE L+ R L +S + Sbjct: 74 VAPGQVVGEHPLLAGGPADHTATAIEPVVACVFQHDQLAGLMGEHPRITRDLLGAMSRRL 133 Query: 124 YRNIVSLTQNQSFPLVNRLAAFILLSQE-------GDLYHEKHTQAAEYLGVSYRHLLYV 176 + + S + RLA ++L + + A YLGV+ Sbjct: 134 ADAEQRIARLTSTDMAARLADYLLDLPAAVQGRDVRVSLPMRKREVASYLGVTPESFSRA 193 Query: 177 LAQFIHDGLLIKSKKGYLIKNRKQLSGLA 205 LA+ GL+ S + + L+ LA Sbjct: 194 LARLEKRGLVEVSGAEIALLDLDGLTELA 222 >UniRef50_UPI00018512E8 cyclic nucleotide-binding protein n=1 Tax=Bacillus coahuilensis m4-4 RepID=UPI00018512E8 Length = 231 Score = 173 bits (439), Expect = 5e-42, Method: Composition-based stats. Identities = 52/214 (24%), Positives = 91/214 (42%), Gaps = 7/214 (3%) Query: 1 MSESAFKDCFLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSL 60 + E F + + + +++ G+ L++L G+ ++Y L NGR L Sbjct: 14 LKEYELDKLFPSPNYEEFSIHTVNKGEHLCSIGEDIHHLYFLVSGKLKVYTNLPNGRSLL 73 Query: 61 IDFFAAPCFIGEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLS 120 I F IGE+EL+ K+ +V+ ++E LA+ + FLR L LS Sbjct: 74 IRFNQPLSIIGELELVTKEPAKHSVETVQESVLLAVQYDYIYKHHYQHPAFLRYLLHHLS 133 Query: 121 HKNYRNIVSLTQNQSFPLVNRLAAFILLSQEGDLYHE-------KHTQAAEYLGVSYRHL 173 ++ Y S + N + NR A++++ + T+ AE LG SYRHL Sbjct: 134 YRLYTASNSSSLNLLTTVENRFASYLMSIYNPEEGSLVEEIKTANLTETAELLGTSYRHL 193 Query: 174 LYVLAQFIHDGLLIKSKKGYLIKNRKQLSGLALE 207 V+ + ++ + K I + +L LA Sbjct: 194 NRVIKELCEKKMIQRKKGVVSILDPVRLETLADG 227 >UniRef50_B8FE86 Transcriptional regulator, Crp/Fnr family n=1 Tax=Desulfatibacillum alkenivorans AK-01 RepID=B8FE86_DESAA Length = 226 Score = 173 bits (439), Expect = 5e-42, Method: Composition-based stats. Identities = 31/208 (14%), Positives = 69/208 (33%), Gaps = 10/208 (4%) Query: 6 FKDCFLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDFFA 65 ++++ R+ A + + ++G + + L+ + G ++ G ++ F+ Sbjct: 16 LTPEDRAELASLLRIQKVKAGEVLFRKGSEGTTLYLIQSGAVKIVLPSRLGDEMIVTIFS 75 Query: 66 APCFIGEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKNYR 125 F GE+ L+D A++ L L + L + + +LS + R Sbjct: 76 EGDFFGEMALLDNMPRSADAIAVDPTVLLLLNRSDFLHFLRKSDGAIEAILSSLSIRLRR 135 Query: 126 NIVSLTQNQSFPLVNRLAAFILLSQE----------GDLYHEKHTQAAEYLGVSYRHLLY 175 L + R A +L + A+ +G + + Sbjct: 136 TDDLLEDTSFLNIPARFAKKLLELGDTFGRRDGETLNISLRLTQKDLADMVGATRESINK 195 Query: 176 VLAQFIHDGLLIKSKKGYLIKNRKQLSG 203 L G++ S IK+ +L Sbjct: 196 ELRVLREKGIVSISGSSLTIKDISRLKR 223 >UniRef50_B2U6W1 Transcriptional regulator, Crp/Fnr family n=8 Tax=Ralstonia RepID=B2U6W1_RALPJ Length = 225 Score = 173 bits (439), Expect = 5e-42, Method: Composition-based stats. Identities = 36/202 (17%), Positives = 74/202 (36%), Gaps = 3/202 (1%) Query: 5 AFKDCFLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDFF 64 F + + ++ D+ D+ + G + + G +L A+G+ +I+FF Sbjct: 19 DFDNDDIALLARDSHAVRVSRHDFAFRRGDHADGFYVVVVGAIKLVLPGAHGQCKVIEFF 78 Query: 65 AAPCFIGEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKNY 124 + GE + QA+E+ + + + L R++ LS + + Sbjct: 79 GPGEWFGEPFMFLNRPHAADAQAMEDSLLVWIGKRGVDDALHVHPRLARQMLTGLSTRLH 138 Query: 125 RNIVSLTQNQSFPLVNRLAAFILLSQ---EGDLYHEKHTQAAEYLGVSYRHLLYVLAQFI 181 + + RL ++L + + + A LG++ L L Q I Sbjct: 139 TLMCDIETVNLQSANERLIGYLLSLPRKFDRTRFPCSKSLVASKLGLAPATLSRTLRQLI 198 Query: 182 HDGLLIKSKKGYLIKNRKQLSG 203 DGL+ + +I+N L Sbjct: 199 RDGLIRVEGREVVIQNTTALQR 220 >UniRef50_A6Q6Z4 Transcriptional regulator, Crp/Fnr family n=1 Tax=Sulfurovum sp. NBC37-1 RepID=A6Q6Z4_SULNB Length = 233 Score = 172 bits (438), Expect = 5e-42, Method: Composition-based stats. Identities = 37/203 (18%), Positives = 76/203 (37%), Gaps = 2/203 (0%) Query: 4 SAFKDCFLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDF 63 SA +L ++ T + + + EG + +L L G +LY T G I+ Sbjct: 11 SALTGTYLKELYDQTHIKQYAKDSIVFYEGDESKYLHILLDGNIKLYKTTPKGTQIQINR 70 Query: 64 FAAPCFIGEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKN 123 AAP IGE + P + + + LP L + F ++ +L+ K Sbjct: 71 LAAPAMIGEYACFENQPFPATCEFLTDGVMGLLPFDFVYKHLD-NPGFSLEIIKSLTGKV 129 Query: 124 YRNIVSLTQNQSFPLVNRLAAFILLSQEGDLYHEKHTQAAEYLGVSYRHLLYVLAQFIHD 183 + + ++A ++ + K+ + A L ++ +L +F + Sbjct: 130 ALLSALVHKETVLSSEAKVAD-LMTQKLPLFQRLKNNEIASMLNLTPETFSRILTKFKKE 188 Query: 184 GLLIKSKKGYLIKNRKQLSGLAL 206 G++ + +I N + L + Sbjct: 189 GIITVKNQKIIILNEEALYNIVE 211 >UniRef50_A0L4U2 Transcriptional regulator, Crp/Fnr family n=1 Tax=Magnetococcus sp. MC-1 RepID=A0L4U2_MAGSM Length = 232 Score = 172 bits (438), Expect = 6e-42, Method: Composition-based stats. Identities = 28/204 (13%), Positives = 66/204 (32%), Gaps = 6/204 (2%) Query: 6 FKDCFLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDFFA 65 + ++A + + + Q+G F + RG +LY A+G +I+ Sbjct: 23 LSEPAWLPLAAQLSRRTLASGEILFQQGDPFEAFFLVLRGGIKLYRLSADGAEKVIEVIM 82 Query: 66 APCFIGEIELI-DKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKNY 124 GE + + P +A+E +A+P Y +L L +S + + Sbjct: 83 PGQTFGEAVMFAQGNRYPVTAEALEATVLVAVPSSAYMAMLQRYPEASVGLLKDMSQRLH 142 Query: 125 RNIVSLTQNQSFPLVNRLAAFILLSQEGD-----LYHEKHTQAAEYLGVSYRHLLYVLAQ 179 ++ + + RL +++ A L + L + Sbjct: 143 HLVMEVDRVTLQRARERLLSYLGQQVACGNGSSCTLKMPRKVLASRLSMQPETLSRLFRG 202 Query: 180 FIHDGLLIKSKKGYLIKNRKQLSG 203 G++ + + + + + Sbjct: 203 LKDQGIIAEQGQIITVLDPHAVQE 226 >UniRef50_A5G0B9 Transcriptional regulator, Crp/Fnr family n=1 Tax=Acidiphilium cryptum JF-5 RepID=A5G0B9_ACICJ Length = 227 Score = 172 bits (438), Expect = 6e-42, Method: Composition-based stats. Identities = 35/204 (17%), Positives = 66/204 (32%), Gaps = 3/204 (1%) Query: 4 SAFKDCFLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDF 63 + F L + A T + + ++Q G + + + G R+ +G ++ Sbjct: 16 APFSPEELDALYACTYERNMTTGEMLIQRGDPGTSMMLILAGEVRVVLPGIDGNDQDLNT 75 Query: 64 FAAPCFIGEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKN 123 GEI L D V A L L L+ D F ++ + + Sbjct: 76 LREGAVFGEIALFDGKPRSADVVAATNGRLLVLERASVVRLIERDPQFAMRVIEIICMRL 135 Query: 124 YRNIVSLTQNQSFPLVNRLAAFILLSQEGDL---YHEKHTQAAEYLGVSYRHLLYVLAQF 180 + L + R+ F+L EG + +G + + L Sbjct: 136 RTTLAQLDSILFQDVSQRVVTFLLQRSEGLERARIDTTQSALGRAVGSTRETVNRRLRDL 195 Query: 181 IHDGLLIKSKKGYLIKNRKQLSGL 204 GL+ + +++R LS L Sbjct: 196 EARGLIELTPGRITVRDRNGLSAL 219 >UniRef50_C6XD76 Transcriptional regulator, Crp/Fnr family n=1 Tax=Methylovorus sp. SIP3-4 RepID=C6XD76_METSD Length = 227 Score = 172 bits (437), Expect = 7e-42, Method: Composition-based stats. Identities = 39/207 (18%), Positives = 78/207 (37%), Gaps = 3/207 (1%) Query: 4 SAFKDCFLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDF 63 L + S R+F + ++ +G + + LF+L GR + GR + ++F Sbjct: 13 QGLIQPLLDEYSRYFRMFRIEKKHFVCHKGDEANELFFLLSGRLMVVDISLEGRQTGLNF 72 Query: 64 FAAPCFIGEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKN 123 A + GE+ ++D P ++ A+ E ALP L+ + ++ + H+ Sbjct: 73 IAPGDYFGELSVLDDLPRPASIVAVSESLIAALPKSKVNSLVNHVPKVAERMLKDMCHRM 132 Query: 124 YRNIVSLTQNQSFPLVNRLAAFILLSQEGDLYH---EKHTQAAEYLGVSYRHLLYVLAQF 180 +R+ I + Y H Q A + S + L Sbjct: 133 RMVTDLRCLLGVPNAYSRVFLLISRMAKNQPYVDHFPSHQQVAIMVNTSRETVSRALGLL 192 Query: 181 IHDGLLIKSKKGYLIKNRKQLSGLALE 207 + +G++ K ++KN L +A + Sbjct: 193 VTEGVIEKEGMRLIVKNPAALHQMASD 219 >UniRef50_C6J2H1 Cyclic nucleotide-binding protein n=2 Tax=Bacillales RepID=C6J2H1_9BACL Length = 239 Score = 172 bits (436), Expect = 9e-42, Method: Composition-based stats. Identities = 29/215 (13%), Positives = 66/215 (30%), Gaps = 10/215 (4%) Query: 2 SESAFKDCFLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLI 61 + S F + + + + ++ EG LFY+ RGR +L + G+ ++ Sbjct: 14 NTSCFSEQNFNRLLVTMKDKSYPEGTHLFWEGDYSDKLFYIKRGRVKLTKSTDEGKELIL 73 Query: 62 DFFAAPCFIGEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSH 121 + +G+ + + IE+C + K ++ F + Sbjct: 74 YMYGVGDMVGQADPFFSSKHSFTAEVIEDCEIGIIEQKDLEIMICQHCDFAIDFMKWMGI 133 Query: 122 KNYRNIVSLTQNQSFPLVNRLAAFILLSQ------EGDLY----HEKHTQAAEYLGVSYR 171 + + L + ++ GD HT + +G + Sbjct: 134 HHRLTQTKFRDLMMYGKPGALCSTLIRLSNTYGEPHGDAILINKKITHTDLSNMIGATRE 193 Query: 172 HLLYVLAQFIHDGLLIKSKKGYLIKNRKQLSGLAL 206 + +L+ L +IK+ L + Sbjct: 194 SVNRMLSDLRKKDALDYENGMIVIKDLVMLQDICH 228 >UniRef50_B4RIS9 Transcriptional regulator(CAMP-binding) n=1 Tax=Phenylobacterium zucineum HLK1 RepID=B4RIS9_PHEZH Length = 231 Score = 172 bits (436), Expect = 1e-41, Method: Composition-based stats. Identities = 34/183 (18%), Positives = 67/183 (36%), Gaps = 8/183 (4%) Query: 27 DYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDFFAAPCFIGEIELIDKDHEPRAVQ 86 + + G P L+ + G RL T ++GR +++ + GE L + Sbjct: 45 EVLFLRGSAPDALYCVDVGVVRLCVTSSSGREAVLGLVTPGHWFGEASLFTGEPRSHDAL 104 Query: 87 AIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKNYRNIVSLTQNQSFPLVNRLAAFI 146 A+ + LA+P L+ +L + + + + L PL RLA + Sbjct: 105 AVVDSELLAVPAAALHELVDGRPAYLLQFLRLMGLRYRSTLERLDDAALQPLPVRLARKL 164 Query: 147 LLSQE--------GDLYHEKHTQAAEYLGVSYRHLLYVLAQFIHDGLLIKSKKGYLIKNR 198 L + A LGVS + + +L ++ G+L + + ++ Sbjct: 165 LEMSRSDATATAGDGVLQISQEDLAHALGVSRQSINRILKRWEAAGVLQVNYRSLVLLKP 224 Query: 199 KQL 201 + L Sbjct: 225 EAL 227 >UniRef50_Q0FXM0 Putative catabolite gene activator n=1 Tax=Fulvimarina pelagi HTCC2506 RepID=Q0FXM0_9RHIZ Length = 249 Score = 172 bits (436), Expect = 1e-41, Method: Composition-based stats. Identities = 38/213 (17%), Positives = 70/213 (32%), Gaps = 9/213 (4%) Query: 4 SAFKDCFLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDF 63 A + D+S A D I G + + + G+ R+ N R ++ Sbjct: 36 QALEPAARRDLSTYAFTRTHGAGDPIFAAGDEGRAMMAIVTGQVRISLVTPNAREVVLAD 95 Query: 64 FAAPCFIGEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKN 123 GEI L+D +A+ L L + +L KL L + Sbjct: 96 LHTDEVFGEIALLDGGERSADARALTNVTLLVLERRDVMKVLKAYPESALKLLELLCARI 155 Query: 124 YRNIVSLTQNQSFPLVNRLAAFILLSQEG---------DLYHEKHTQAAEYLGVSYRHLL 174 R+ + + + RLA +L +G T+ A+ +G + Sbjct: 156 RRSDERMAELAFLDISTRLARALLRILDGPNRTGRKGIQRLSLSQTEMAQMIGSGREPVN 215 Query: 175 YVLAQFIHDGLLIKSKKGYLIKNRKQLSGLALE 207 L + G++ ++ +R L LA + Sbjct: 216 RCLKGWERRGVVELKDGWLVVSDRGALELLAAQ 248 >UniRef50_Q0EX27 Cyclic nucleotide-binding:Bacterial regulatory protein, Crp n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0EX27_9PROT Length = 227 Score = 172 bits (436), Expect = 1e-41, Method: Composition-based stats. Identities = 34/215 (15%), Positives = 74/215 (34%), Gaps = 11/215 (5%) Query: 4 SAFKDCFLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDF 63 S + L ++ ++ +VQE ++ + G ++ +GR ++ Sbjct: 12 SELNEGELASIAKLASSIDVQKKNIVVQEFAPGDSMYVILSGEVKISTYSVDGREVVLAL 71 Query: 64 FAAPCFIGEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKN 123 F GE+ L+D+ V + + + + PLL+ KL ++ + Sbjct: 72 LGKGSFFGEMSLLDEQPRSATVTTMTDAKLAHIRRRDLVPLLMERPAITLKLLSEITSRL 131 Query: 124 YRNIVSLTQNQSFPLVNRLAAFILLSQEG----------DLYHEKHTQAAEYLGVSYRHL 173 R L + S + +RL A+I+ H A+ L S + Sbjct: 132 RRTSRVLERISSMDVPHRLYAYIVDHCHRFGQPKSDGRYSTVLPTHQLLADQLSTSRETI 191 Query: 174 LYVLAQFIHDGL-LIKSKKGYLIKNRKQLSGLALE 207 ++ +G+ L +G + + L + Sbjct: 192 SRAISTLKKEGILLQGDGRGKMSVDVDALEERIDD 226 >UniRef50_A0NZG3 CAMP-binding protein-catabolite gene activator and regulatory subunit of cAMP-dependent protein kinase n=1 Tax=Labrenzia aggregata IAM 12614 RepID=A0NZG3_9RHOB Length = 234 Score = 172 bits (436), Expect = 1e-41, Method: Composition-based stats. Identities = 49/222 (22%), Positives = 77/222 (34%), Gaps = 10/222 (4%) Query: 4 SAFKDCFLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDF 63 S + L ++ + + + A I G +P L + G R++ + A GR + Sbjct: 13 SNIDEGSLDLLTRLSTIARYEAESAIFAAGDEPDGLRVIITGSIRIWISDAEGRELTLAL 72 Query: 64 FAAPCFIGEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKN 123 GEI ++DK A+ CL LP L F L L Sbjct: 73 LEPGDPFGEISVLDKLPRTANASALANSECLFLPKDAMEIALDKSPQFAHHLIQLLCEIL 132 Query: 124 YRNIVSLTQNQSFPLVNRLAAFILLSQ--------EGDLY--HEKHTQAAEYLGVSYRHL 173 RN ++ L RLA +L +G + + A LGV+ L Sbjct: 133 RRNTEAMGAFAFLGLDGRLAQKLLDLALSYADLKDDGAKFKRKFSQNELAHMLGVTREAL 192 Query: 174 LYVLAQFIHDGLLIKSKKGYLIKNRKQLSGLALEMDPENKFS 215 L HDGL+ + I N + L+ A + N+ Sbjct: 193 NKRLNALAHDGLITLTNGLISIPNLEALATRARAAERLNRGR 234 >UniRef50_A3WI44 Transcriptional regulator, Crp/Fnr family protein n=1 Tax=Erythrobacter sp. NAP1 RepID=A3WI44_9SPHN Length = 232 Score = 171 bits (435), Expect = 1e-41, Method: Composition-based stats. Identities = 34/209 (16%), Positives = 92/209 (44%), Gaps = 7/209 (3%) Query: 5 AFKDCFLTDVSADTRLFHFLARDYIVQEGQQ-PSWLFYLTRGRARLYATLANGRVSLIDF 63 A + + + + D ++ +G + + Y+ G ++ A+GR ++ + Sbjct: 19 ALEPEQIEALLKNATRKDLKPDDVVINQGDENGDYAVYVLSGGLKISFVSASGREIILSY 78 Query: 64 FAAPCFIGEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKN 123 + IGEI L+D + A+ E L LP K + + ++ + ++ L+ + Sbjct: 79 CSPGEVIGEIALLDSEPRTATATAVVESSVLLLPSKQFLEAVSSNPTSVARIMRELAQRV 138 Query: 124 YRNIVSLTQNQSFPLVNRLAAFILLSQEGD------LYHEKHTQAAEYLGVSYRHLLYVL 177 + + + +++F + RLA ++ + D LY+ + + G++ ++ +L Sbjct: 139 RQQNLIIESDRTFSMGPRLARALVRLIDKDRNDGGLLYNPSQSDLGAFAGLARENVSRLL 198 Query: 178 AQFIHDGLLIKSKKGYLIKNRKQLSGLAL 206 +++ G++ + + +++ + L LA Sbjct: 199 SEWESQGIIARDGRTLSVRDIEYLRSLAE 227 >UniRef50_C6WZT9 Transcriptional regulator, Crp/Fnr family n=2 Tax=Flavobacteriaceae RepID=C6WZT9_FLAB3 Length = 237 Score = 171 bits (435), Expect = 1e-41, Method: Composition-based stats. Identities = 36/207 (17%), Positives = 81/207 (39%), Gaps = 8/207 (3%) Query: 6 FKDCFLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDFFA 65 + + + F + I ++G P+ +++L +G A+L G+ ++ F A Sbjct: 26 LSEEDFAHYISVKQQLKFRKGETIFEDGGTPNGVYFLNKGTAKLSKQGVYGKEHILRFIA 85 Query: 66 APCFIGEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKNYR 125 IG L+ + +A+ + + LP + LL + ++ + Sbjct: 86 EGDLIGYRSLLCGEQFQARAEAMTDVEAIFLPSDVFLHLLEVGPRLSFVMLQKIAFELGE 145 Query: 126 NIVSLTQNQSFPLVNRLAAFILLSQEG--------DLYHEKHTQAAEYLGVSYRHLLYVL 177 + ++T + RLA +LL ++ + A +G + + ++ Sbjct: 146 SSNTVTVLAQKTVRERLAEILLLLEQKLGTDPEGFIKITLTREEIANLVGTATESAIRLI 205 Query: 178 AQFIHDGLLIKSKKGYLIKNRKQLSGL 204 ++F DGL+ + I NR++L L Sbjct: 206 SEFKQDGLIEADGRSLKILNREKLIKL 232 >UniRef50_A1SH48 Cyclic nucleotide-binding n=1 Tax=Nocardioides sp. JS614 RepID=A1SH48_NOCSJ Length = 235 Score = 171 bits (434), Expect = 2e-41, Method: Composition-based stats. Identities = 37/216 (17%), Positives = 71/216 (32%), Gaps = 7/216 (3%) Query: 5 AFKDCFLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDFF 64 + ++ F R+ + G + + L + RG+ + Y G L+ Sbjct: 19 GLSEADQHRIAETAVTRTFEPREQVYGAGDR-TGLHIVHRGQVKAYRLTEGGSEQLVRLL 77 Query: 65 AAPCFIGEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKNY 124 + F+GE L+ AI ++P R LL+ ++ T+S + Sbjct: 78 SPGDFLGESALLADSVSDHFAMAIRRSEVCSVPRAGMRQLLVERPAVALQMLQTVSGRLA 137 Query: 125 RNIVSLTQNQSFPLVNRLAAFILLSQEG-----DLYHEKHTQAAEYLGVSYRHLLYVLAQ 179 L + RLA +L + A YLG + L L Sbjct: 138 AAEEMLAAVTGQSVGERLAQQLLHLADEAGSASFRLPTSKRDLASYLGTTPETLSRRLGA 197 Query: 180 FIHDGLLIKS-KKGYLIKNRKQLSGLALEMDPENKF 214 G + ++ + +R++L L P ++ Sbjct: 198 LQRSGAVRLGPQRTVTVVDRRRLEQLGAGAGPPDRG 233 >UniRef50_B8G1C8 Transcriptional regulator, Crp/Fnr family n=3 Tax=Peptococcaceae RepID=B8G1C8_DESHD Length = 223 Score = 171 bits (434), Expect = 2e-41, Method: Composition-based stats. Identities = 28/211 (13%), Positives = 73/211 (34%), Gaps = 11/211 (5%) Query: 2 SESAFKDCFLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLI 61 + + + + + + + I E ++++ G R++ GR + Sbjct: 8 ARTLLTEEEVGHIVQSGTIVRYKKGQIIFSESDAADRVYFVKEGYVRIFRITQYGRRVTV 67 Query: 62 D-FFAAPCFIGEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLS 120 + +G E + AI++ + + + + LL K+ +TL+ Sbjct: 68 GCIRSPGQLMGLAETLYGGDRTCFASAIDDVTIVVIRHQQFLDLLEKHPAIAIKVTITLA 127 Query: 121 HKNYRNIVSLTQNQSFPLVNRLAAFILLSQEG----------DLYHEKHTQAAEYLGVSY 170 + + + F + RLA ++ + + H A +G S Sbjct: 128 IRMREAEGIIEEMVCFQVPGRLAQLLIKMAKRAGMETPRGTKISFRLTHEDIAYMIGTSR 187 Query: 171 RHLLYVLAQFIHDGLLIKSKKGYLIKNRKQL 201 +++ +L F ++ + K I + ++L Sbjct: 188 QNVTSLLNTFKYENSIAIEDKELYILDIEKL 218 >UniRef50_Q1AXQ1 Transcriptional regulator, Crp/Fnr family n=1 Tax=Rubrobacter xylanophilus DSM 9941 RepID=Q1AXQ1_RUBXD Length = 234 Score = 170 bits (433), Expect = 2e-41, Method: Composition-based stats. Identities = 36/213 (16%), Positives = 72/213 (33%), Gaps = 10/213 (4%) Query: 5 AFKDCFLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDFF 64 F + F +D I G L++L G RLY + + + Sbjct: 17 GFDLKDFEEAGLRVVERRFEPKDLIFAPGDPDDQLYFLLSGVVRLYKIYGDYKEATTALL 76 Query: 65 AAPCFIGEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKNY 124 G++ L++ + +A+ E A+ ++ F KL +LS + Sbjct: 77 KDRGIFGKLSLVEGRWQDVFAEAVTEARVAAIQKAAIEQVIKTKPDFALKLFSSLSERLR 136 Query: 125 RNIVSLTQNQSFPLVNRLAAFILLSQEG----------DLYHEKHTQAAEYLGVSYRHLL 174 ++ + + RLA +L E H A + + + Sbjct: 137 QSDEVIESLLHREVSTRLATLLLNLGERFGREEGGRLVIEVRMTHQDLANMIASTREAVS 196 Query: 175 YVLAQFIHDGLLIKSKKGYLIKNRKQLSGLALE 207 V+++F +GL+ + + NR+ L+ A Sbjct: 197 KVMSEFQREGLIETRNRRIALLNREALAERAAG 229 >UniRef50_Q03QC4 Crp-like transcriptional regulator n=1 Tax=Lactobacillus brevis ATCC 367 RepID=Q03QC4_LACBA Length = 232 Score = 170 bits (433), Expect = 2e-41, Method: Composition-based stats. Identities = 38/209 (18%), Positives = 66/209 (31%), Gaps = 5/209 (2%) Query: 4 SAFKDCFLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDF 63 D V+ TR H + + G+ L+ + G+ RLY A+G ++ Sbjct: 24 QHLSDEQKVSVAQVTRPVHAAKGETVFAMGEVSQTLYIVNTGQVRLYHLAADGHEQVLRV 83 Query: 64 FAAPCFIGEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKN 123 F+GE L + A + + L+ L L+ + Sbjct: 84 LNPGDFVGETALFTDEIHASFAAATQTGELCTISRAALTALVKTLPPVALALLQALADRL 143 Query: 124 YRNIVSLTQNQSFPLVNRLAAFILLSQEGDLY----HEKHTQAAEYLGVSYRHLLYVLAQ 179 T + RLA ++ A YLG++ L L Q Sbjct: 144 KTAERQATLLAIPDALPRLAGYLQAISGRQAITLTLPMSKQDLAAYLGMTPESLSRKLRQ 203 Query: 180 FIHDGLLIKSKKG-YLIKNRKQLSGLALE 207 G++ + I ++L+ LA E Sbjct: 204 LAKAGIIETVGRRQIGIIAPEKLAELAPE 232 >UniRef50_A0RGL8 Cyclic nucleotide-binding domain protein n=90 Tax=Firmicutes RepID=A0RGL8_BACAH Length = 243 Score = 170 bits (433), Expect = 2e-41, Method: Composition-based stats. Identities = 63/215 (29%), Positives = 110/215 (51%), Gaps = 7/215 (3%) Query: 1 MSESAFKDCFLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSL 60 M ++ F D++ L F ++I +E ++ +L++ G+A+ + TL+NG+ L Sbjct: 27 MKQNNIDSFFSNDMNPYMELIFFKKNEFICRENEEIDYLYFFVEGKAKAFNTLSNGKSVL 86 Query: 61 IDFFAAPCFIGEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLS 120 + F+ + +G++ELI VQ + + +C+ LP+ R L +D FLR +C +L+ Sbjct: 87 LCFYDSLQLLGDVELIHSQKTASNVQVMADSYCVGLPLGKVRNQLFHDAKFLRCICGSLA 146 Query: 121 HKNYRNIVSLTQNQSFPLVNRLAAFIL-------LSQEGDLYHEKHTQAAEYLGVSYRHL 173 HK R + T N +PL NRLA+++L ++ T+ AE LG SYRHL Sbjct: 147 HKLNRLSKNSTINLLYPLENRLASYMLAAGERAVQHGNRIVFSGNLTETAELLGTSYRHL 206 Query: 174 LYVLAQFIHDGLLIKSKKGYLIKNRKQLSGLALEM 208 L L F ++ K+ + + N L LA ++ Sbjct: 207 LRTLNIFCDKEIIKKNNGCFEVVNVDVLRELAADV 241 >UniRef50_A8LVR8 Transcriptional regulator, Crp/Fnr family n=2 Tax=Salinispora RepID=A8LVR8_SALAI Length = 223 Score = 170 bits (433), Expect = 3e-41, Method: Composition-based stats. Identities = 37/218 (16%), Positives = 71/218 (32%), Gaps = 10/218 (4%) Query: 4 SAFKDCFLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDF 63 S D H+ D + +E Q W+ L GR + A+G L+ Sbjct: 6 STLTDSERDAFRQRATTRHWQRGDVLFREADQSGWVAALVAGRVKASCHSASGTEILLAV 65 Query: 64 FAAPCFIGEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKN 123 +GE+ +D+ VQA++ L +P ++ L +L L+ + Sbjct: 66 RGPGALLGELSAVDRLPRSATVQALDPVTALVMPPAGFQEYLQQQGRVAFQLMRLLAERL 125 Query: 124 YRNIVSLTQNQSFPLVNRLAAFILLSQEGD----------LYHEKHTQAAEYLGVSYRHL 173 + + R+AA ++ E + A ++G S + Sbjct: 126 RDADRKRIEFGAQDSTGRVAARLVELAERFGTPVDNGIHVAVRLSQDELAGWIGASREAV 185 Query: 174 LYVLAQFIHDGLLIKSKKGYLIKNRKQLSGLALEMDPE 211 L G + S+ ++ + L A P+ Sbjct: 186 TKSLRVLRDSGWVRTSRLSVVVLDLDALRRRADGGPPD 223 >UniRef50_Q1PUQ2 Similar to transcriptional regulator of Crp/Fnr family n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1PUQ2_9BACT Length = 228 Score = 170 bits (433), Expect = 3e-41, Method: Composition-based stats. Identities = 21/204 (10%), Positives = 61/204 (29%), Gaps = 11/204 (5%) Query: 4 SAFKDCFLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDF 63 ++ + L + F I + + + G+ ++ +G+ ++ Sbjct: 17 NSLANEQLKTLFRAGITKSFPKDHVIFYQHDHGDTFYIVITGKVKITLLNEDGKEIVLSL 76 Query: 64 FAAPCFIGEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKN 123 F GE+ L+D + + +E + L+ N L K+ + + Sbjct: 77 LKEGDFFGEMSLMDDETRSVSAVCVENTTLFLFTRNQFHKLISNYPGLLTKIFTEICSRL 136 Query: 124 YRNIVSLTQNQSFPLVNRLAAFILLSQE----------GDLYHEKHTQAAEYLGVSYRHL 173 + + R + + + H + A +G S + Sbjct: 137 RHANKKIESLAFLDVCGRTIQLLQQLKLEQGEKTNAGIEISHAPTHKEIASMVGASRETI 196 Query: 174 LYVLAQFIHDG-LLIKSKKGYLIK 196 ++ + L+ + +++ Sbjct: 197 TRIIKVLKDNNTLVSYKGRKVILR 220 >UniRef50_A8VXQ4 Putative transcriptional regulator, Crp/Fnr family n=1 Tax=Bacillus selenitireducens MLS10 RepID=A8VXQ4_9BACI Length = 216 Score = 170 bits (432), Expect = 3e-41, Method: Composition-based stats. Identities = 39/194 (20%), Positives = 71/194 (36%), Gaps = 2/194 (1%) Query: 5 AFKDCFLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDFF 64 D + +V + ++ + EG +LF L G + NG S+I+ Sbjct: 15 GLNDQEIDEVISFGYEQTLNDKERLFWEGDDKKYLFVLGSGTVLISKLTENGNESVINVL 74 Query: 65 AAPCFIGEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKNY 124 +A L D P A +E LA+P++ L+LN K+ ++ Sbjct: 75 SAGEVFPHAGLFDHSVYPGTATAKKEVKVLAIPVEQIESLILNKPEIAIKIIQMMNENML 134 Query: 125 RNIVSLTQNQSFPLVNRL--AAFILLSQEGDLYHEKHTQAAEYLGVSYRHLLYVLAQFIH 182 L + S + +RL A L+ +GD H + +G + + L ++ Sbjct: 135 MLQRKLNELLSLDVSSRLKSAMDHLIKVQGDEIILTHQEIGYLIGSTRETVSRQLKKWEK 194 Query: 183 DGLLIKSKKGYLIK 196 G + K +I Sbjct: 195 LGWISVKKDRIIIH 208 >UniRef50_A7G373 Transcriptional regulator, Crp/Fnr family n=14 Tax=Clostridium RepID=A7G373_CLOBH Length = 228 Score = 170 bits (432), Expect = 3e-41, Method: Composition-based stats. Identities = 27/208 (12%), Positives = 64/208 (30%), Gaps = 9/208 (4%) Query: 5 AFKDCFLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDFF 64 F + + + I + + + GR R++ G I+ Sbjct: 14 DINSDFYKIFEEAGTIKKYSKDEIIYFQEDVAENFYLIKSGRVRMFLISPEGTELTIEIL 73 Query: 65 AAPCFIGEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKNY 124 GE +V A + +++ +++ P L + ++ +S Sbjct: 74 RKGKLFGESSCFSYGSRLTSVSAATDVELISVSLENLYPYLTKYPELMVQMFHLMSLTMK 133 Query: 125 RNIVSLTQNQSFPLVNRLAAFILLS---------QEGDLYHEKHTQAAEYLGVSYRHLLY 175 + ++ P +LA ++ + + H + A+ +G + Sbjct: 134 NLSIQVSNMAFLPAEKKLAQLLVRLGAHFKKNKNDKYYIIDYSHEEIAQLIGSCRVTVTK 193 Query: 176 VLAQFIHDGLLIKSKKGYLIKNRKQLSG 203 +L F G++ K I + K L Sbjct: 194 ILNSFQEKGMISLGYKKIKIIDEKGLKK 221 >UniRef50_Q2BCV7 Cyclic nucleotide-binding domain protein n=2 Tax=Bacillus RepID=Q2BCV7_9BACI Length = 231 Score = 170 bits (432), Expect = 3e-41, Method: Composition-based stats. Identities = 84/215 (39%), Positives = 127/215 (59%) Query: 1 MSESAFKDCFLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSL 60 + + + F + + + ++I++EG +P +LFY+ G+A++Y T NG+VSL Sbjct: 13 LEKHSIAHLFSFPIEEGIEVHEYQRDEWIIREGMRPDYLFYVIEGKAKIYITYQNGKVSL 72 Query: 61 IDFFAAPCFIGEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLS 120 I+F +IGE+EL+ + + + +QA C A+P+ YR +L DTLFLR+L LS Sbjct: 73 INFINTHDYIGEMELLHEVYYTKGIQASTRTICFAIPLTQYRNQMLEDTLFLRELTKFLS 132 Query: 121 HKNYRNIVSLTQNQSFPLVNRLAAFILLSQEGDLYHEKHTQAAEYLGVSYRHLLYVLAQF 180 K +Q+ +FPL NRLA FIL + +GDLY EKH ++LGVSYRHLL+VLAQF Sbjct: 133 LKATNMAAKYSQSLAFPLENRLADFILQTADGDLYKEKHVTVCDFLGVSYRHLLHVLAQF 192 Query: 181 IHDGLLIKSKKGYLIKNRKQLSGLALEMDPENKFS 215 G L K YL+++R +L LA + + S Sbjct: 193 CEQGYLRKEGMRYLVESRGRLEELAGVLRNQGDGS 227 >UniRef50_A4TDK3 Transcriptional regulator, Crp/Fnr family n=8 Tax=Actinomycetales RepID=A4TDK3_MYCGI Length = 225 Score = 170 bits (432), Expect = 3e-41, Method: Composition-based stats. Identities = 36/214 (16%), Positives = 74/214 (34%), Gaps = 10/214 (4%) Query: 4 SAFKDCFLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDF 63 + + + + F + EG L+ +T GRA++ T +GR SL+ Sbjct: 12 QDVDPGAVAALCSQLQKVSFPRGHRVFNEGDLGDTLYIITSGRAKIGCTSPDGRESLLTL 71 Query: 64 FAAPCFIGEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKN 123 GE+ + D +V A+ + + R + +L L+ + Sbjct: 72 MGPSDMFGELAIFDPGPRTSSVTALTALHAVMMDRDALRFWIAERPEIAEQLLRVLARRL 131 Query: 124 YRNIVSLTQNQSFPLVNRLAAFILLSQEGDLYH----------EKHTQAAEYLGVSYRHL 173 R +L+ + R+A +L + A+ G S + Sbjct: 132 RRTNDALSDLIFTDVPGRVAKQLLDLARRFGVQQEGSLRVDHGLTQEEIAQLAGSSRETI 191 Query: 174 LYVLAQFIHDGLLIKSKKGYLIKNRKQLSGLALE 207 LA F+ G + + + +I + +L+ A + Sbjct: 192 NKALADFVQRGWIEQRGRTTIIHDPARLARRAQQ 225 >UniRef50_D2LDW4 Transcriptional regulator, Crp/Fnr family n=1 Tax=Rhodomicrobium vannielii ATCC 17100 RepID=D2LDW4_RHOVA Length = 251 Score = 170 bits (432), Expect = 3e-41, Method: Composition-based stats. Identities = 38/209 (18%), Positives = 79/209 (37%), Gaps = 10/209 (4%) Query: 4 SAFKDCFLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDF 63 + + + A + + F + + ++G+ +F + G+ R+Y +GR + + Sbjct: 40 HGLDEDDIAALFAVSCVKAFAPGEAVFRQGEAHEGIFVILCGKIRVYYLGPSGRELTLAY 99 Query: 64 FAAPCFIGEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKN 123 ++A F+G + + + QA E L +P R L+ L ++HK Sbjct: 100 WSAGNFVGGPHIFGECQHMWSGQAEEAAEVLVVPGTGMRALIEQRPRLAVALVEAMAHKG 159 Query: 124 YRNIVSLTQNQSFPLVNRLAAFILLSQE------GDLY----HEKHTQAAEYLGVSYRHL 173 + + RLA +LL E GD + A +G + + + Sbjct: 160 KCFSSLIQMLGTRSAAERLAQLLLLMAEMGGQRIGDRIIINRTLTQDELARLVGATRQWI 219 Query: 174 LYVLAQFIHDGLLIKSKKGYLIKNRKQLS 202 L +F GL+ + +I + +L Sbjct: 220 SATLERFREKGLIEVAPDRIVILDEARLR 248 >UniRef50_B8G0V1 Transcriptional regulator, Crp/Fnr family n=2 Tax=Desulfitobacterium hafniense RepID=B8G0V1_DESHD Length = 228 Score = 170 bits (432), Expect = 3e-41, Method: Composition-based stats. Identities = 30/199 (15%), Positives = 74/199 (37%), Gaps = 9/199 (4%) Query: 14 VSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDFFAAPCFIGEI 73 + + H+ +++ ++ Q + L L +G+ ++ + + G + AP GE Sbjct: 21 LLSSGIPRHYQKGEFVFEKDQPSNGLICLKKGKVKVSSFFSEGSEKIFGILVAPALFGET 80 Query: 74 ELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKNYRNIVSLTQN 133 E +D+ + A+ +A+ + L+ + ++ K + Sbjct: 81 ETLDQGPRMVSATALTHVEIVAISGNKTKELIYTYPDIALSIIQSIGVKLRWTTLQAEDL 140 Query: 134 QSFPLVNRLAAFILLSQEGDLYH---------EKHTQAAEYLGVSYRHLLYVLAQFIHDG 184 + + RLA +L + ++ H + A ++G + + L +F H G Sbjct: 141 STQKIEYRLARLLLDFKHYGIFTSKNNDNCLMITHEELAHFIGTARSKVTTYLNEFAHKG 200 Query: 185 LLIKSKKGYLIKNRKQLSG 203 L+ + I + L+ Sbjct: 201 LIRLRRGEIRILDTAGLNK 219 >UniRef50_Q8KBR5 Transcriptional regulator, Crp/Fnr family n=1 Tax=Chlorobaculum tepidum RepID=Q8KBR5_CHLTE Length = 225 Score = 170 bits (431), Expect = 4e-41, Method: Composition-based stats. Identities = 34/213 (15%), Positives = 70/213 (32%), Gaps = 11/213 (5%) Query: 7 KDCFLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDFFAA 66 + L F + EG L +L GR ++Y L G+ + F Sbjct: 11 SHATRQILEKYLTLRSFRKGQLLWSEGDTDGLLVFLKSGRVKIYRLLPMGKAITLYIFGK 70 Query: 67 PCFIGEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKNYRN 126 G + D P QA+++C + R + D L L+ + Sbjct: 71 GSVFGFMPFFDDAPYPAYAQALDDCEADVISRSGLRQAVHQDPEVAIVLMKQLAQRLRDA 130 Query: 127 IVSLTQNQSFPLVNRLAAFILLSQEG----------DLYHEKHTQAAEYLGVSYRHLLYV 176 ++ + QS ++AA ++ + + A+ LG++ L Sbjct: 131 FDTIERLQSKGANPKVAAALMALMDDSPNIAGRPLFITLPVASHEFAQSLGLTPETLSRS 190 Query: 177 LAQFIHDGLLIK-SKKGYLIKNRKQLSGLALEM 208 + + +L + + + I + + L +A Sbjct: 191 ITHLVEKNILKRLQRNRFQILDLEALEKVAESA 223 >UniRef50_C8VYA1 Transcriptional regulator, Crp/Fnr family n=1 Tax=Desulfotomaculum acetoxidans DSM 771 RepID=C8VYA1_DESAS Length = 227 Score = 170 bits (431), Expect = 4e-41, Method: Composition-based stats. Identities = 38/212 (17%), Positives = 71/212 (33%), Gaps = 11/212 (5%) Query: 4 SAFKDCFLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDF 63 S V A + ++I +EG+ ++ + GR RL+ G+ +D Sbjct: 14 STLDVVERERVGALAGRKLYNKNEFIFREGEATCTIYLIKYGRVRLFKISEGGKEITLDI 73 Query: 64 FAAPCFIGEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKN 123 GE +D QAIE+ + + +H+ LLL + K+ L K Sbjct: 74 LKEDDIFGENTFLDDSKHTMNAQAIEDTFICSCNKEHFI-LLLQNPRTSLKIIQLLGKKL 132 Query: 124 YRNIVSLTQNQSFPLVNRLAAFILLSQEG----------DLYHEKHTQAAEYLGVSYRHL 173 + + R++A +L + H A + S + Sbjct: 133 NDYTDQVANIAFRDVKGRISATLLRLADEYGKPSPEGVIINIELTHQDLANLVNASRVMV 192 Query: 174 LYVLAQFIHDGLLIKSKKGYLIKNRKQLSGLA 205 VL +G ++ + + N+ L A Sbjct: 193 TNVLINLRQEGAILTKGQRISLLNKDLLVDAA 224 >UniRef50_A7BRS9 Transcriptional Regulator, Crp/Fnr family n=1 Tax=Beggiatoa sp. PS RepID=A7BRS9_9GAMM Length = 248 Score = 170 bits (431), Expect = 4e-41, Method: Composition-based stats. Identities = 34/207 (16%), Positives = 60/207 (28%), Gaps = 8/207 (3%) Query: 4 SAFKDCFLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDF 63 S D T + R +Y+ + GQ+ F L G +L G + + Sbjct: 23 SGLNDQQFTQIKQGMRPIRLEDGEYLFKHGQRAEHFFMLKEGYIKLLRLSLEGAEKVFEV 82 Query: 64 FAAPCFIGEIELID-KDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHK 122 + E + QAI L+ K +L +L +S + Sbjct: 83 VSPGQTFAEAIMFMPNSTYLVTAQAISHSVVLSFENKVLLDILQQSPDACFRLMFQMSKR 142 Query: 123 NYRNIVSLTQNQSFPLVNRLAAFIL-------LSQEGDLYHEKHTQAAEYLGVSYRHLLY 175 I + RL ++L + + A L + L Sbjct: 143 IGMWINEIDNLTLQNATYRLVNYLLYQVPDSQQNTYEINFPIPKHVIASRLSIKPETLSR 202 Query: 176 VLAQFIHDGLLIKSKKGYLIKNRKQLS 202 +L +GL+ + I N +L Sbjct: 203 ILHGLNKEGLITVKGRSIRIHNIDRLR 229 >UniRef50_B8FQL0 Transcriptional regulator, Crp/Fnr family n=3 Tax=Desulfitobacterium hafniense RepID=B8FQL0_DESHD Length = 220 Score = 170 bits (431), Expect = 4e-41, Method: Composition-based stats. Identities = 37/212 (17%), Positives = 78/212 (36%), Gaps = 10/212 (4%) Query: 4 SAFKDCFLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDF 63 D + + + I + + S L YL G+ + + ++G + Sbjct: 9 YNLDDNTRDILKHLGTPLEYGPGEMIYYQDEPASGLVYLDEGKIKNFFLYSDGTEKTLCI 68 Query: 64 FAAPCFIGEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKN 123 AP GE +ID + A+ + + +P + + LL + + + ++ K Sbjct: 69 LEAPSITGETAVIDGGTSICSAVAVTQVKIVFIPREKAQELLASKPELMMLILKYMALKI 128 Query: 124 YRNIVSLTQNQSFPLVNRLAAFIL---------LSQEGDLYHEKHTQAAEYLGVSYRHLL 174 V + S + RLA +L + + KH + A ++G + + Sbjct: 129 RSMQVQAQEIVS-NIPQRLAYLLLNYKKYGIFVHNAQDPRLFIKHDELAGFIGTTRPKVT 187 Query: 175 YVLAQFIHDGLLIKSKKGYLIKNRKQLSGLAL 206 L F GL+ K + +IK+ + L ++ Sbjct: 188 EHLNNFSRKGLIDKGRGYIVIKDLEGLRKISR 219 >UniRef50_A6NUW6 Putative uncharacterized protein n=1 Tax=Bacteroides capillosus ATCC 29799 RepID=A6NUW6_9BACE Length = 209 Score = 170 bits (431), Expect = 4e-41, Method: Composition-based stats. Identities = 29/202 (14%), Positives = 60/202 (29%), Gaps = 3/202 (1%) Query: 8 DCFLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDFFAAP 67 + ++ + I + Q +Y+ G + + + G + Sbjct: 6 EDIWRPLAEGRTPQIYEPGRLIYLQDTQAEQFYYILSGTVKCFLSSGAGSERTLTLHHGG 65 Query: 68 CFIGEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKNYRNI 127 IGE D+ + A+ C +++ H + + L+ Sbjct: 66 ELIGEAAFFDRQPRVSSAVAVTRCELVSVDRPHLSEVFSRHPDLAVSMLEYLARTVRLLS 125 Query: 128 VSLTQNQSFPLVNRLAAFILLS--QEGDLYHEKHTQAAEYLGVSYRHLLYVLAQFIHDGL 185 V + R+A ++L + H + +GVS + VL G Sbjct: 126 VHV-DGTLLQADQRIARYLLSLTPEADGTIRCTHEEIGAAVGVSRVTVSRVLGDLAKAGA 184 Query: 186 LIKSKKGYLIKNRKQLSGLALE 207 + + I NR L +A Sbjct: 185 VSTGYRTLKIANRASLQHMAES 206 >UniRef50_C9Y9B1 Putative uncharacterized protein n=1 Tax=Curvibacter putative symbiont of Hydra magnipapillata RepID=C9Y9B1_9BURK Length = 248 Score = 169 bits (430), Expect = 5e-41, Method: Composition-based stats. Identities = 34/200 (17%), Positives = 73/200 (36%), Gaps = 8/200 (4%) Query: 4 SAFKDCFLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDF 63 + + D++A+ + +V++G + LF + GR+ + T + G+ ++ Sbjct: 41 ANLTQEQIDDLAANVTKRKIKKGEDVVRQGHNSNALFLILSGRSHVVMTDSKGKEVILAT 100 Query: 64 FAAPCFIGEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKN 123 A +IGE+ LID + VQA + L L + + N+ + L + Sbjct: 101 LKAGDYIGEMSLIDNEAHSATVQAETQMDVLVLGRDDFTRCVSNNAAIAGAVMRGLVQRL 160 Query: 124 YRNIVSLTQNQSFPLVNRLAAFILLSQEGDLY-------HEKHTQAAEYLGVSYRHLLYV 176 + + R+A +L E + ++ +G S + V Sbjct: 161 RTADQKIVSLALMGVYGRVANVLLDMAEPIDKGEMLIREKVSRSDLSKMVGASREMVSRV 220 Query: 177 LAQFIHDGLLIKSK-KGYLI 195 + F G + + G + Sbjct: 221 MKDFEDQGFIKTNNDGGIRV 240 >UniRef50_B1ZX96 Transcriptional regulator, Crp/Fnr family n=2 Tax=Opitutaceae RepID=B1ZX96_OPITP Length = 241 Score = 169 bits (430), Expect = 5e-41, Method: Composition-based stats. Identities = 34/211 (16%), Positives = 72/211 (34%), Gaps = 9/211 (4%) Query: 5 AFKDCFLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDFF 64 A L ++ ++ + + EG+ + + G+ ++ GR + F Sbjct: 30 ALPHADLETIAEGCQMRSLQKGEILFHEGEPAEGFYVIQLGQIGIFFITPEGREQIFSVF 89 Query: 65 AAPCFIGEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKNY 124 AP E+ + H P +A+E + + +R LL ++ ++S Sbjct: 90 RAPESFAEVVMAM-RHFPAGAKALEYSRVILVRRAPFRELLGRKPELALQMLASMSMHLK 148 Query: 125 RNIVSLTQNQSFPLVNRLAAFILLSQEG--------DLYHEKHTQAAEYLGVSYRHLLYV 176 + L ++ + RLA ++L A LGV+ L Sbjct: 149 ELLRLLQDSRGRQIEARLAEWLLQQSPAAAAGCPAVFELPVAKKVLASQLGVTSETLSRT 208 Query: 177 LAQFIHDGLLIKSKKGYLIKNRKQLSGLALE 207 A+F + ++ + + N +L A Sbjct: 209 FARFREEKVIQVTGATIGVLNGARLRAYAAG 239 >UniRef50_C8SMN6 Transcriptional regulator, Crp/Fnr family n=1 Tax=Mesorhizobium opportunistum WSM2075 RepID=C8SMN6_9RHIZ Length = 316 Score = 169 bits (430), Expect = 5e-41, Method: Composition-based stats. Identities = 29/210 (13%), Positives = 69/210 (32%), Gaps = 5/210 (2%) Query: 6 FKDCFLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDFFA 65 + + +L + A ++ + +F + G + +G+ + + Sbjct: 106 IDPSQFDLLFSGCKLERYAAGQHLFLQEDAADRIFGVMSGTVEISIYSPDGQKLVANIEL 165 Query: 66 APCFIGEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKNYR 125 + +GEI +D + C ++L H + + R + L + Sbjct: 166 SRSLVGEIGALDGRPRTATAICLTACELVSLSRTHLFDRIEKNPSLARAMIELLCARLRW 225 Query: 126 NIVSLTQNQSFPLVNRLAAFILLSQ-----EGDLYHEKHTQAAEYLGVSYRHLLYVLAQF 180 L F + RLA ++ + ++ E+LGV+ + L + Sbjct: 226 VSGELGDQAFFGIEARLAKRLVFLEGVMADGAGWISISQSELGEFLGVTRESINKTLNDW 285 Query: 181 IHDGLLIKSKKGYLIKNRKQLSGLALEMDP 210 + ++ + G I + L +A D Sbjct: 286 RNRRVIAIRRGGLRISDAGALRRIAESQDD 315 >UniRef50_C1PC82 Transcriptional regulator, Crp/Fnr family n=1 Tax=Bacillus coagulans 36D1 RepID=C1PC82_BACCO Length = 226 Score = 169 bits (430), Expect = 6e-41, Method: Composition-based stats. Identities = 30/210 (14%), Positives = 74/210 (35%), Gaps = 11/210 (5%) Query: 5 AFKDCFLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDFF 64 D L ++ + H +I +G ++++ G ++Y T ANG+ ++ Sbjct: 12 GLGDADLAVIADISVKKHAEKDAHIFFQGDPQEAVYFIESGEVKIYRTDANGKEQVVTLL 71 Query: 65 AAPCFIGEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKNY 124 + K P A+ + +A+ + + +LLN+ L +S + Sbjct: 72 RDGDMFPHVGFFRKISYPANAMAVVDTNLVAIRITDFENVLLNNPQLTMTLYGVMSDEIL 131 Query: 125 RNIVSLTQNQSFPLVNRLAAFILLS-------QEGDLY----HEKHTQAAEYLGVSYRHL 173 L ++ L ++ ++ A +GV+ + Sbjct: 132 DLQDRLEAQILNNAYEQVVKLFLRLTRTHGVQEKDGFVLVKTPLNNSDLANMIGVTRETV 191 Query: 174 LYVLAQFIHDGLLIKSKKGYLIKNRKQLSG 203 + Q L++ +KG + ++++L+ Sbjct: 192 SRTIRQLKEKNLILPQEKGTYLIHQEKLTE 221 >UniRef50_B2UG02 Transcriptional regulator, Crp/Fnr family n=2 Tax=Ralstonia pickettii RepID=B2UG02_RALPJ Length = 243 Score = 169 bits (429), Expect = 7e-41, Method: Composition-based stats. Identities = 34/203 (16%), Positives = 63/203 (31%), Gaps = 3/203 (1%) Query: 7 KDCFLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDFFAA 66 L +++ R+ + + + G +F + RGR R+ T G + A Sbjct: 37 PADLLAEIAPTARVITYPDGECVHPHGGPAQGMFLIMRGRVRISRTTDGGSELVYGVLRA 96 Query: 67 PCFIGEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKNYRN 126 + GEI LID + A + L + ++ + L L + Sbjct: 97 GEWFGEIALIDGGGRTHSAHAQGPTTLVLLGSAAFARVVSAYPAGMWALMQQLCQRIRLI 156 Query: 127 IVSLTQNQSFPLVNRLAAFILLSQ---EGDLYHEKHTQAAEYLGVSYRHLLYVLAQFIHD 183 P RLA +L +G + + L S + + L + Sbjct: 157 FDEFEHASEMPADARLAQRLLQLARAGDGRTVAASNEELGRMLARSRQTISKYLQAWQRA 216 Query: 184 GLLIKSKKGYLIKNRKQLSGLAL 206 G + + I + L L Sbjct: 217 GWIRCHYRTVEIVDAAALRMLMD 239 >UniRef50_Q3ZWV2 Transcriptional regulator cNTP-binding, Crp n=2 Tax=Dehalococcoides RepID=Q3ZWV2_DEHSC Length = 247 Score = 168 bits (428), Expect = 8e-41, Method: Composition-based stats. Identities = 41/212 (19%), Positives = 77/212 (36%), Gaps = 10/212 (4%) Query: 6 FKDCFLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDFFA 65 T++S R +L +++ EG+ S +F +T+GR +L+ T NGR ++ + Sbjct: 16 LSKSEKTEISHLFRRPEYLKNEHLFSEGEPASAVFVVTKGRIKLFKTSENGREIVLGYLT 75 Query: 66 APCFIGEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKNYR 125 GE L + A A+E+ A + LL ++ K+ LS K Sbjct: 76 PNQLFGEEILFNDAIRTIAAVAVEDTKLCACYKNDFENLLSQNSQIAVKVIKALSDKINH 135 Query: 126 NIVSLTQNQSFPLVNRLAAFILLSQEGD----------LYHEKHTQAAEYLGVSYRHLLY 175 +L + RLA + + + H +G S + Sbjct: 136 ITETLADMAIYDTQVRLARTLARLAKEHGEDVCDGRRLNFRLTHDDLGSLVGASRVMVTN 195 Query: 176 VLAQFIHDGLLIKSKKGYLIKNRKQLSGLALE 207 V+ G++ L+ ++ L + E Sbjct: 196 VMKSLKKSGIIKDDIDHKLVVSQWFLKDYSDE 227 >UniRef50_Q5SID7 Transcription regulator, Crp family n=3 Tax=Thermus RepID=Q5SID7_THET8 Length = 216 Score = 168 bits (428), Expect = 8e-41, Method: Composition-based stats. Identities = 37/205 (18%), Positives = 71/205 (34%), Gaps = 3/205 (1%) Query: 4 SAFKDCFLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDF 63 + + + + I +G L+ + G+ RL+ T G+ + Sbjct: 8 HGLAPEEVDLALSYFQRRLYPQGKPIFYQGDLGQALYLVASGKVRLFRTHLGGQERTLAL 67 Query: 64 FAAPCFIGEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKN 123 GE+ L+D+ + A+E+ LAL + Y L+ L L L+ + Sbjct: 68 LGPGELFGEMSLLDEGERSASAVAVEDTELLALFREDYLALIRRLPLVAHNLAALLARRL 127 Query: 124 YRNIVSLTQNQSFPLVNRLAAFILLSQEGD---LYHEKHTQAAEYLGVSYRHLLYVLAQF 180 + L NR+A +L L+ +H + A G S + VL Sbjct: 128 READLELDLLSFEEARNRVAYALLKLLRQGLGPLFQIRHHELAALAGTSRETVSRVLHAL 187 Query: 181 IHDGLLIKSKKGYLIKNRKQLSGLA 205 +G++ ++ L +A Sbjct: 188 AEEGVVRLGPGTVEVREAALLEEIA 212 >UniRef50_Q223N1 Transcriptional regulator, Crp/Fnr family n=2 Tax=Burkholderiales RepID=Q223N1_RHOFD Length = 234 Score = 168 bits (428), Expect = 8e-41, Method: Composition-based stats. Identities = 28/213 (13%), Positives = 65/213 (30%), Gaps = 12/213 (5%) Query: 4 SAFKDCFLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDF 63 S ++ RL + + G+ + G+ +LY + G+ +I+ Sbjct: 19 SDLSQLERERIARGCRLVRLARGEMFFRVGEACEAFHVVVSGQIKLYVSSPAGQEKVIEI 78 Query: 64 FAAPCFIGEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKN 123 E + Q++ + +++ + D F + +S + Sbjct: 79 IGPGRSFAEALVFLGQPHIVNAQSLTDTLLVSVAKAAVLAEVERDPRFSLHMLAGISRRL 138 Query: 124 YRNIVSLTQNQSFPLVNRLAAFILLSQE------------GDLYHEKHTQAAEYLGVSYR 171 + I + + RL ++L E A L ++ Sbjct: 139 HSLIHDVEGYALQSGMQRLIGYLLRDVEAAVGHGSGNVSVSVHLPASKATIASRLSLTPE 198 Query: 172 HLLYVLAQFIHDGLLIKSKKGYLIKNRKQLSGL 204 + VL + GL+ K+ I + +L+ Sbjct: 199 YFSRVLHELETQGLIQIDKREIRILDVHRLANF 231 >UniRef50_B4RUQ2 Cyclic nucleotide-binding protein n=2 Tax=Alteromonas macleodii RepID=B4RUQ2_ALTMD Length = 229 Score = 168 bits (428), Expect = 8e-41, Method: Composition-based stats. Identities = 31/207 (14%), Positives = 60/207 (28%), Gaps = 10/207 (4%) Query: 5 AFKDCFLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDFF 64 A + RL H A + +G+ + + GR R+ +GR L Sbjct: 16 ALPPYLQEAMFDKMRLKHLKAGQQLHAKGEDGVGFYGVCEGRLRVVTVGVDGREMLFALL 75 Query: 65 AAPCFIGEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKNY 124 + GEI + D C + ++ LL L + Sbjct: 76 GPGTWFGEISMFDDLPRTHDNFCETNCTVAIIQKNAFKALLEQYPELYPHFTRLLCTRVR 135 Query: 125 RNIVSLTQNQSFPLVNRLAAFILLSQ----------EGDLYHEKHTQAAEYLGVSYRHLL 174 + + L ++L +L+ A+ + S + + Sbjct: 136 SAFQFIDSSAGLSLKHQLVKRLLMLTTSYGQHLPRNNAITLTLSQESLAQMINSSRQTVN 195 Query: 175 YVLAQFIHDGLLIKSKKGYLIKNRKQL 201 +L + +GLL + I + L Sbjct: 196 QLLGELESEGLLKRHYGKITIPEPETL 222 >UniRef50_A4VHY5 DnrE protein n=5 Tax=Pseudomonas stutzeri RepID=A4VHY5_PSEU5 Length = 229 Score = 168 bits (428), Expect = 9e-41, Method: Composition-based stats. Identities = 34/203 (16%), Positives = 71/203 (34%), Gaps = 6/203 (2%) Query: 5 AFKDCFLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDFF 64 + L +++ T H A + +G L G+ +L+ +G+ +I+ Sbjct: 19 GLSETALQNIATHTTARHLPAGCTLFHQGDAAEHFHVLINGQVKLHRVTCDGQEKVIEVI 78 Query: 65 AAPCFIGEIELIDK-DHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKN 123 E L +K P + ++E L + HY LL +L +LS + Sbjct: 79 RPGEAFAEGMLFNKLAEHPLSATTLKESLVLNVQNSHYLRLLETQPQLCMQLLSSLSARL 138 Query: 124 YRNIVSLTQNQSFPLVNRLAAFILL-----SQEGDLYHEKHTQAAEYLGVSYRHLLYVLA 178 + + + S + R+ ++ + A LG+ L +L Sbjct: 139 NQRLHQIDNLTSSNVCQRVVRYLFQERQTARSDVIDLDLPKRLIASQLGIQPETLSRILH 198 Query: 179 QFIHDGLLIKSKKGYLIKNRKQL 201 + GL+ ++ I ++ L Sbjct: 199 RLTDAGLIAVQRRRIEILDQHSL 221 >UniRef50_D0AGV6 Predicted protein n=2 Tax=Enterococcus RepID=D0AGV6_ENTFC Length = 227 Score = 168 bits (428), Expect = 9e-41, Method: Composition-based stats. Identities = 57/209 (27%), Positives = 107/209 (51%), Gaps = 1/209 (0%) Query: 1 MSESAFKDCFLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSL 60 + + +D +D+ A L F ++++Q G+ +L++L G +Y+ ++ + Sbjct: 14 VEKHNLQDYMDSDILAMASLLFFEKEEHLIQTGKTSDYLYFLVDGTVMVYSYSSDTQNIC 73 Query: 61 IDFFAAPCFIGEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLS 120 ID+ +GE + + +V+A+ +C C+++P+ YR L D FL+ +C LS Sbjct: 74 IDYAKPATPLGEASSLWELSPKSSVKAVTKCICISIPLNQYRTQLQKDVRFLQNICQLLS 133 Query: 121 HKNYRNIVSLTQNQSFPLVNRLAAFILLSQEGDLYHEKHTQAAEYLGVSYRHLLYVLAQF 180 ++ + ++L + + P+ RLA FIL E + + + T A L VSYRHLL + F Sbjct: 134 YRL-NSGINLANSLTEPVETRLAKFILTHHENERFSFRLTTCASILNVSYRHLLRTITNF 192 Query: 181 IHDGLLIKSKKGYLIKNRKQLSGLALEMD 209 + ++ K K YLI + + L LA + Sbjct: 193 REENIIEKKKNYYLIHDIEALEDLAENIS 221 >UniRef50_Q46R24 Cyclic nucleotide-binding n=2 Tax=Cupriavidus RepID=Q46R24_RALEJ Length = 254 Score = 168 bits (428), Expect = 9e-41, Method: Composition-based stats. Identities = 35/210 (16%), Positives = 67/210 (31%), Gaps = 7/210 (3%) Query: 5 AFKDCFLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARL----YATLANGRVSL 60 L ++ +++ + G S L + G +L G Sbjct: 15 GVDARVLGAIANGATTQRLSKGEFLFRRGDACSGLIIVLDGLVKLALPATPCSVKGLERA 74 Query: 61 IDFFAAPCFIGEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLS 120 ++ F GE L +P QA+ L + L D L +L LS Sbjct: 75 VEVFGPGAVFGEDVLFADALQPADCQAMMRTTVLCIDSAALWDTLEQDPLLSARLLRNLS 134 Query: 121 HKNYRNIVSLTQNQSFPLVNRLAAFILLSQEGDL---YHEKHTQAAEYLGVSYRHLLYVL 177 + + + + + R+A F+ A LG++ L V+ Sbjct: 135 SRLHALMRDIEATSLQNALQRVAGFLRDEAHAGRCTWLACTQRVIASKLGITPETLSRVV 194 Query: 178 AQFIHDGLLIKSKKGYLIKNRKQLSGLALE 207 ++F + L+ + + + + L LA E Sbjct: 195 SRFSAENLVRLERGKIFVLDAEGLGRLAAE 224 >UniRef50_B1XXN2 Transcriptional regulator, Crp/Fnr family n=1 Tax=Leptothrix cholodnii SP-6 RepID=B1XXN2_LEPCP Length = 237 Score = 168 bits (428), Expect = 1e-40, Method: Composition-based stats. Identities = 34/192 (17%), Positives = 65/192 (33%), Gaps = 8/192 (4%) Query: 11 LTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDFFAAPCFI 70 L ++ + ++QEG Q L+ + GR R ++ N R + ++ Sbjct: 39 LRALAERAEPRRYRKGVLLIQEGDQGDTLYIVLSGRVRAFSQGDNEREITYGVYGPGEYV 98 Query: 71 GEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKNYRNIVSL 130 GEI L D +V +E C+ +P + + F +L + + +S Sbjct: 99 GEISL-DGGPRSASVITVEPTACVVIPRQTLLLHIAQYPEFAFELLAKVIRRARAATLSA 157 Query: 131 TQNQSFPLVNRLAAFILLSQE-------GDLYHEKHTQAAEYLGVSYRHLLYVLAQFIHD 183 Q + RL A + E H A LG S + ++ Sbjct: 158 KQLALNDVYGRLRALLESLAEAQPDGTRQVGERLTHQDMANRLGCSREMVSRLMKDLEEG 217 Query: 184 GLLIKSKKGYLI 195 G + + ++ Sbjct: 218 GYVAVNGHTLVL 229 >UniRef50_D1Y1F2 Putative transcriptional Regulator, Crp/Fnr family n=1 Tax=Pyramidobacter piscolens W5455 RepID=D1Y1F2_9BACT Length = 234 Score = 168 bits (427), Expect = 1e-40, Method: Composition-based stats. Identities = 33/203 (16%), Positives = 64/203 (31%), Gaps = 4/203 (1%) Query: 6 FKDCFLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDFFA 65 + + + + +EGQ + ++ G+ +L A G + D Sbjct: 25 LPGKARLRLVRYSSQKDCARGETLFREGQPIRSVLFIVAGKVKLCRYDAEGEEHIFDILH 84 Query: 66 APCFIGEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKNYR 125 + + L++ P A + + + LL L L K + Sbjct: 85 DGDTVWDGLLMENTVYPYAAVCLTPVRLCLVGRGEFLRLLGEQPQIAMTLISLLGRKLRQ 144 Query: 126 NIVSLTQNQSFPLVNRLAAFILLSQE---GDLYHEKHTQAAEYLGVSYRHLLYVLAQFIH 182 RLA F+L G K A +G+ + L++F Sbjct: 145 ANEKNLLLSVRDPRLRLAGFLLDRDRRCIGPDIELKLDDIAASVGLRPETVSRGLSRFER 204 Query: 183 DGLLIKSK-KGYLIKNRKQLSGL 204 DGL+ ++ L+ +R L + Sbjct: 205 DGLIRRTGQGRILVVDRPGLEDI 227 >UniRef50_Q1ASB9 Transcriptional regulator, Crp/Fnr family n=1 Tax=Rubrobacter xylanophilus DSM 9941 RepID=Q1ASB9_RUBXD Length = 250 Score = 168 bits (426), Expect = 1e-40, Method: Composition-based stats. Identities = 29/213 (13%), Positives = 70/213 (32%), Gaps = 14/213 (6%) Query: 4 SAFKDCFLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGR---VSL 60 S + F ++ + A + +EG+ ++++ GR +L+ +GR + Sbjct: 37 SGLDEGFFQALALAAEVLEIGAGTPLYREGEPSGAVYFVREGRVKLFR-SFSGRKPRDQI 95 Query: 61 IDFFAAPCFIGEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLS 120 + +G ++ + A+ +C A+ ++ +L L+ Sbjct: 96 LGVLGDGAVLGLDAALEGRPQSHGATALTDCALYAVFRDDLTGIMCRFPEASLRLSRALA 155 Query: 121 HKNYRNIVSLTQNQSFPLVNRLAAFILLSQEGD----------LYHEKHTQAAEYLGVSY 170 + ++ R+A +L + + AE G+S Sbjct: 156 SRIRELEDLVSDLVFHSAPQRVARMLLRLATEEGRVTKQGVVFEPSLSRQEMAEATGISR 215 Query: 171 RHLLYVLAQFIHDGLLIKSKKGYLIKNRKQLSG 203 L L++ +G+L + I +L Sbjct: 216 EALSRALSRLAQEGILDLEGRTITILKPAELRA 248 >UniRef50_A3JD75 Transcriptional regulator, Crp/Fnr family protein n=1 Tax=Marinobacter sp. ELB17 RepID=A3JD75_9ALTE Length = 250 Score = 168 bits (426), Expect = 1e-40, Method: Composition-based stats. Identities = 36/214 (16%), Positives = 75/214 (35%), Gaps = 10/214 (4%) Query: 5 AFKDCFLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDFF 64 L V+ R F++ A + E + LF + G +L A+G L+D Sbjct: 37 GLAAPALDAVNHYFRAFNYAAGAALHHENEPAEALFLVAHGTVKLLQYSASGEEVLLDLL 96 Query: 65 AAPCFIGEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKNY 124 G + ++ + P+ A C L + + +R LL + + ++ Sbjct: 97 GQSDLFGGLTMLGQRCYPQNAFAQTPCCVLVITITDFRYLLRTYSEVALNVLDAVARDLE 156 Query: 125 RNIVSLTQNQSFPLVNRLAAFILLSQEG----------DLYHEKHTQAAEYLGVSYRHLL 174 ++ + P+ R+A ++ + H A + + Sbjct: 157 AAQATIRAISTLPVEARIARVLVRLADRLGEADDGGILIQSPLSHQDLAAMEATTSETVS 216 Query: 175 YVLAQFIHDGLLIKSKKGYLIKNRKQLSGLALEM 208 V++ G + ++ I+NR L+ LA E+ Sbjct: 217 RVISGLRRSGDIETGRQWIRIRNRTNLARLAGEI 250 >UniRef50_B4RIF4 Transcriptonal regulator (About nitrogen fixation regulation protein,cAMP-binding protein) n=1 Tax=Phenylobacterium zucineum HLK1 RepID=B4RIF4_PHEZH Length = 232 Score = 168 bits (426), Expect = 2e-40, Method: Composition-based stats. Identities = 38/202 (18%), Positives = 75/202 (37%), Gaps = 10/202 (4%) Query: 12 TDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDFFAAPCFIG 71 + A + I EG+ ++++ + +G R Y LA+GR + +FF G Sbjct: 34 DPLGATGVRKTYARNAEIFGEGEPATYIYRVMKGVVRTYRILADGRRQIAEFFLPGDVFG 93 Query: 72 EIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKNYRNIVSLT 131 L + +A+ +C LA+ + D KL H R+ + Sbjct: 94 LQAL---GDHAASAEAVTDCEVLAIRRSQISDRAMRDNTTAHKLLALTLHHLRRSEEHML 150 Query: 132 QNQSFPLVNRLAAFILLSQE------GDLYHEKHTQAAEYLGVSYRHLLYVLAQFIHDGL 185 RLA F++ E A++LG++ + ++Q D + Sbjct: 151 VLGRKSACERLAWFLMDMAERIPAPNRIELPMSRQDIADFLGLTIETVSRTMSQLQDDKV 210 Query: 186 LIKSK-KGYLIKNRKQLSGLAL 206 + + ++++R+ L LA Sbjct: 211 IALPSCRQVVLRDRETLMNLAA 232 >UniRef50_C8W2K0 Transcriptional regulator, Crp/Fnr family n=1 Tax=Desulfotomaculum acetoxidans DSM 771 RepID=C8W2K0_DESAS Length = 232 Score = 168 bits (426), Expect = 2e-40, Method: Composition-based stats. Identities = 29/214 (13%), Positives = 69/214 (32%), Gaps = 11/214 (5%) Query: 1 MSESAFKDCFLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSL 60 M ++ + ++ I G + + ++Y+ G ++Y A+GR Sbjct: 16 MDTLVLEEEETKAIMQTGLKINYPKGHVIFSAGDKANQIYYIESGYVKIYRLNADGRKVN 75 Query: 61 I-DFFAAPCFIGEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTL 119 + +G E + + + + + K + L+ + K+ L Sbjct: 76 VGSLRNPGEIMGIAETLYETERTCFAGTMTDAVLYVVTYKDFLKLMTDHHYLSIKVAKLL 135 Query: 120 SHKNYRNIVSLTQNQSFPLVNRLAAFILLSQEG----------DLYHEKHTQAAEYLGVS 169 + + + + + RLA +L E H + A +G S Sbjct: 136 GTRMREAESIIHELVCWQVPGRLALMLLKIGERCGINTENGTLIKLRLTHEEIANMIGTS 195 Query: 170 YRHLLYVLAQFIHDGLLIKSKKGYLIKNRKQLSG 203 + + ++ F + + K I N +L+ Sbjct: 196 RQTVTSLINTFKQEQSITVEGKDIKIVNPNKLAN 229 >UniRef50_C6DKQ2 Transcriptional regulator, Crp/Fnr family n=5 Tax=Pectobacterium RepID=C6DKQ2_PECCP Length = 238 Score = 167 bits (425), Expect = 2e-40, Method: Composition-based stats. Identities = 35/203 (17%), Positives = 67/203 (33%), Gaps = 6/203 (2%) Query: 13 DVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDFFAAPCFIGE 72 ++ A + F D + +EG + + G+ + + G + F F+ Sbjct: 33 ELLAKSERLFFRQDDVLFREGDKMQHCLLVETGKLQAFRHTYGGDEKIFGQFERGEFVAI 92 Query: 73 IELI-DKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKNYRNIVSLT 131 + D P ++A+ + L +P + L +L L K Y I + Sbjct: 93 AAVFMDHGRFPMNIRALSDGHTLMIPRQDIHQFCLQRPELALRLLNYLGKKLYSTINQID 152 Query: 132 QNQSFPLVNRLAAFIL-----LSQEGDLYHEKHTQAAEYLGVSYRHLLYVLAQFIHDGLL 186 S RLA ++L + Q A LG+ L +++ + G + Sbjct: 153 WLTSSSAPQRLADYLLRQHHIQQTQQLTLPVSRGQLATSLGMRGETLSRLMSDWKRQGYI 212 Query: 187 IKSKKGYLIKNRKQLSGLALEMD 209 + + L LA E Sbjct: 213 TYRGHQVELCDMNYLKELAAEAR 235 >UniRef50_Q3K5V6 Cyclic AMP receptor protein,catabolite gene activator n=16 Tax=Gammaproteobacteria RepID=Q3K5V6_PSEPF Length = 214 Score = 167 bits (425), Expect = 2e-40, Method: Composition-based stats. Identities = 35/198 (17%), Positives = 67/198 (33%), Gaps = 13/198 (6%) Query: 11 LTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDFFAAPCFI 70 L + + A+ I+ G + L+++ RG + +GR +I + A F Sbjct: 13 LDKLLMHCQRRRHAAKSNIICAGDRSDTLYFIIRGSVTILIEDDDGREMIIAYLNAGDFF 72 Query: 71 GEIELID----KDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKNYRN 126 GE+ L + + V+A EC + +R L D L L ++ + Sbjct: 73 GELGLFEEAGQEQQRSAWVRAKVECEVAEISYAKFRELSQQDPDILYVLSGQIAQRLRNT 132 Query: 127 IVSLTQNQSFPLVNRLAAFILL---------SQEGDLYHEKHTQAAEYLGVSYRHLLYVL 177 + F + R+A +L +G + +G S + VL Sbjct: 133 TRKVGDLAFFDVTGRVARCLLELCKQPDAMTHPDGMQIKVTRQEIGRIVGCSREMVGRVL 192 Query: 178 AQFIHDGLLIKSKKGYLI 195 L+ K ++ Sbjct: 193 KDLEERNLVDVKGKTMVV 210 >UniRef50_C5SD75 Transcriptional regulator, Crp/Fnr family n=1 Tax=Allochromatium vinosum DSM 180 RepID=C5SD75_CHRVI Length = 239 Score = 167 bits (425), Expect = 2e-40, Method: Composition-based stats. Identities = 30/208 (14%), Positives = 63/208 (30%), Gaps = 5/208 (2%) Query: 4 SAFKDCFLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDF 63 S + L V+ A + +G + + L GR RL+ G +I+ Sbjct: 12 SRLEATQLQRVARHASRVKLNAEQLLFSQGDPATRFYLLLSGRMRLFRLSPEGAEKVIEI 71 Query: 64 FAAPCFIGEIELIDKDH-EPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHK 122 + E + P A+ + +A+ + +L L LS + Sbjct: 72 VSPGQTFAEALMFLNAPRYPVCSAALADSELIAIDSSDFAAMLRESVDTCFVLLGALSQR 131 Query: 123 NYRNIVSLTQNQSFPLVNRLAAFILLS----QEGDLYHEKHTQAAEYLGVSYRHLLYVLA 178 I + +R+A ++ + + A L V V+ Sbjct: 132 LRGLIGEIDDLTLHTATSRVARYLASRLPPGAQSLELEVRKGVLASRLSVQPETFSRVIK 191 Query: 179 QFIHDGLLIKSKKGYLIKNRKQLSGLAL 206 G++ + +++ L +A Sbjct: 192 SLSEQGIIRMDGTLVSVLDQRALLEIAE 219 >UniRef50_C6D048 Transcriptional regulator, Crp/Fnr family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D048_PAESJ Length = 234 Score = 167 bits (425), Expect = 2e-40, Method: Composition-based stats. Identities = 56/210 (26%), Positives = 104/210 (49%), Gaps = 4/210 (1%) Query: 1 MSESAFKDCFLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSL 60 +++ A D F + + L+ F D + ++G+ P ++F+L RG+ ++Y T A+G+ L Sbjct: 14 LAQYALDDVFPSSLRQHLTLYRFEPDDTLCKQGEIPEYIFFLMRGKVKVYTTSADGKTLL 73 Query: 61 IDFFAAPCFIGEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLS 120 I+F + +GEIE +++ V A+ +A + + L + FL+ + ++ Sbjct: 74 INFTSPLGVLGEIECLNELENLNTVSAVTPVETVAFHKR-WLKLYREEVPFLQFMLHLVT 132 Query: 121 HKNYRNIVSLTQNQSFPLVNRLAAFILLSQEGDLYHEK---HTQAAEYLGVSYRHLLYVL 177 K Y VSL+ N +P+ RLA+++L D A +G SYRHL ++ Sbjct: 133 EKFYNKSVSLSFNLLYPVEVRLASYLLSVTTPDDARVSTAHLKDMANLIGTSYRHLNRII 192 Query: 178 AQFIHDGLLIKSKKGYLIKNRKQLSGLALE 207 F L+ +S+ ++KNR L A + Sbjct: 193 LNFTSANLIERSRGTLVVKNRMGLEEAAGK 222 >UniRef50_Q47H89 Cyclic nucleotide-binding n=36 Tax=Betaproteobacteria RepID=Q47H89_DECAR Length = 245 Score = 167 bits (425), Expect = 2e-40, Method: Composition-based stats. Identities = 30/207 (14%), Positives = 70/207 (33%), Gaps = 9/207 (4%) Query: 5 AFKDCFLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDFF 64 + L ++ TR + + + G + L G+ +L + G +++ Sbjct: 34 GLSEDELARLAKSTREVRISKGETLFRRGDPSTGFHVLVYGQMKLALSSVQGTEKVVEII 93 Query: 65 AAPCFIGEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKNY 124 GE + + QA+ + L + L ND F+RK+ ++ + + Sbjct: 94 QPGQSFGEAIMFMEKPYFVFAQALSDSLVLHVSKAAIYEELENDHAFVRKMLAGMAMRLH 153 Query: 125 RNIVSLTQNQSFPLVNRLAAFILL-------SQEGDLYHEK--HTQAAEYLGVSYRHLLY 175 + + + R+ F++ + + + A L ++ H Sbjct: 154 QLMTDVEAYSLHSGTQRVIGFLMHELAESQLNDDNVVLELSANKGVIASRLNLTQEHFSR 213 Query: 176 VLAQFIHDGLLIKSKKGYLIKNRKQLS 202 +L GL++ K I + +L Sbjct: 214 ILHDLSSLGLIVVEGKRIRIPSVPKLR 240 >UniRef50_Q3JIA6 Transcriptional regulator, Crp/Fnr family n=100 Tax=Betaproteobacteria RepID=Q3JIA6_BURP1 Length = 630 Score = 167 bits (425), Expect = 2e-40, Method: Composition-based stats. Identities = 37/212 (17%), Positives = 68/212 (32%), Gaps = 12/212 (5%) Query: 4 SAFKDCFLTDVSA-DTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLID 62 L + + + + +EG L+ + G + AT +GR + Sbjct: 420 QGLAPEALARLESVICTARPVRRGETLFREGDTFDNLYAVRSGSLKTIATRHDGREQVTG 479 Query: 63 FFAAPCFIGEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHK 122 A +G ++ I D PR A+E+ +P + L ++ +S + Sbjct: 480 LHLAGEALG-LDGICDDAHPRTAVALEDSSVCVIPYSALKTLCSEAGTMQLRMHKLMSEQ 538 Query: 123 NYRNIVSLTQNQSFPLVNRLAAFILLSQ----------EGDLYHEKHTQAAEYLGVSYRH 172 R S R+AAF+L YLG++ Sbjct: 539 IVRETSQTMVLGSLNAEERVAAFLLDVSSRYMKRGYSPNEFNLRMTREDIGSYLGMTLET 598 Query: 173 LLYVLAQFIHDGLLIKSKKGYLIKNRKQLSGL 204 + L++F GL+ + I + L L Sbjct: 599 VSRTLSKFHKRGLIEMQGRMVRIVDFDGLHRL 630 >UniRef50_C5R9W7 CRP/FNR family transcriptional regulator n=1 Tax=Weissella paramesenteroides ATCC 33313 RepID=C5R9W7_WEIPA Length = 226 Score = 167 bits (425), Expect = 2e-40, Method: Composition-based stats. Identities = 32/209 (15%), Positives = 64/209 (30%), Gaps = 12/209 (5%) Query: 5 AFKDCFLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDFF 64 A L +S + + + L+ + G + Y L NG+ LI Sbjct: 18 ALDQDDLGKISQNITSRQLAKGEILYSLNDNDDTLYIVHTGELKNYRILENGKEQLIRLL 77 Query: 65 AAPCFIGEIELI-DKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKN 123 F GE + ++A+E L + ++ +L L +S + Sbjct: 78 GPGAFTGEWSIFKSDIKHNDYIEALEPTEICQLTRQGFKQVLGQYPEISMSLLQHMSERL 137 Query: 124 YRNIVSLTQNQSFPLVNRLAAFILLS-------QEGDL---YHEKHTQAAEYLGVSYRHL 173 + + R+ +++ QEG + A YLG + + Sbjct: 138 DISENQTATLAYGSITKRITSYLADLIINSKVNQEGTIQVALPMTRKDLASYLGTTPESV 197 Query: 174 LYVLAQFIHDGLLI-KSKKGYLIKNRKQL 201 + G++ S K + + L Sbjct: 198 TRGFNKLEKAGVIESISNKIIQVHDFNSL 226 >UniRef50_B6BLA3 Transcription regulator n=1 Tax=Campylobacterales bacterium GD 1 RepID=B6BLA3_9PROT Length = 210 Score = 167 bits (424), Expect = 2e-40, Method: Composition-based stats. Identities = 36/197 (18%), Positives = 74/197 (37%), Gaps = 4/197 (2%) Query: 5 AFKDCFLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDFF 64 D + + T + + EG +L+ L G +LY T +N + ++ +F Sbjct: 13 DLDDDTIQRIEKLTTEHTISKDNIVFYEGDDSKYLYLLVHGIIKLYKTSSNHKEIVLKYF 72 Query: 65 AAPCFIGEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKNY 124 IGE+ ++ P +A + L + + ++ ++ + +L K Sbjct: 73 HENELIGEVANFEQIPYPATAKAYTDVEILKIDFSSLKEIIYSNPELSFIIQTSLIKKIK 132 Query: 125 RNIVSLTQNQSFPLVNRLAAFILLSQEGDLYHEKHTQAAEYLGVSYRHLLYVLAQFIHDG 184 V ++ N R+A +I + + K+ AE L VS L +L F Sbjct: 133 NLEVIISTNLVLDSKERVAKYIYNHTDD-FFTTKNIIIAEILSVSPETLSRILKFFKDHD 191 Query: 185 LLIKSKKGYLIKNRKQL 201 ++ K +++ L Sbjct: 192 IIDIKSKRI---DKEAL 205 >UniRef50_C9YFM8 Putative uncharacterized protein n=1 Tax=Curvibacter putative symbiont of Hydra magnipapillata RepID=C9YFM8_9BURK Length = 264 Score = 167 bits (424), Expect = 2e-40, Method: Composition-based stats. Identities = 33/217 (15%), Positives = 69/217 (31%), Gaps = 13/217 (5%) Query: 4 SAFKDCFLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDF 63 S D+ + F D I G+ P +G R+ +T +G+ + + Sbjct: 46 STLSPSLKHDILRCAFVKRFKDGDLIAARGEPPEEWIACAKGAVRVSSTSISGKQITLTY 105 Query: 64 FAAPCFIGEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKN 123 + G++ + D D A E L + ++ +L + + + Sbjct: 106 VEPGIWFGDVSIFDGDRRTHDAYAHGETTVLCVAKADFKKILATHVELYEAMLRLHARRI 165 Query: 124 YRNIVSLTQNQSFPLVNRLAAFILLS-------------QEGDLYHEKHTQAAEYLGVSY 170 + + + PL RLA +L + + A+ LG S Sbjct: 166 RQLYGLVEDLNTLPLRARLAKQLLHLVRSYGVPSLSDGSEVRIGLQLAQEELAQLLGASR 225 Query: 171 RHLLYVLAQFIHDGLLIKSKKGYLIKNRKQLSGLALE 207 + + L + + G +I++R L + Sbjct: 226 QRVNQELKAMEREEAIRIEPGGLVIRDRAALMRVIES 262 >UniRef50_Q72SA0 Transcriptional regulator (Crp family) n=2 Tax=Leptospira interrogans RepID=Q72SA0_LEPIC Length = 231 Score = 167 bits (424), Expect = 2e-40, Method: Composition-based stats. Identities = 28/206 (13%), Positives = 77/206 (37%), Gaps = 6/206 (2%) Query: 6 FKDCFLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDFFA 65 L +++ + F + ++QEG + + +++ G R++ ++G+ Sbjct: 22 ISLDTLKKINSSKKFRLFRKNELLIQEGTKTNGFYFIKSGCVRIFRNSSSGKEQTFSIRR 81 Query: 66 APCFIGEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKNYR 125 A ++G +L+ + ++AIE + + L+ D+ F ++ ++ + + Sbjct: 82 AGEWVGFRDLLAGKTFVQNIEAIENVEACYISKEVLNELMEEDSNFQMEILKQMATEWKQ 141 Query: 126 NIVSLTQNQSFPLVNRLAAFILLSQE------GDLYHEKHTQAAEYLGVSYRHLLYVLAQ 179 + + +++A ++ + + A +G S L+ L+ Sbjct: 142 LEDQTLTLGTKQVHSKIAELLISFRTTSPDKSEIELNLTREIMASMVGTSTETLVRALSD 201 Query: 180 FIHDGLLIKSKKGYLIKNRKQLSGLA 205 F H + K N L ++ Sbjct: 202 FKHRKWIKIRKNRICFLNVDALKEIS 227 >UniRef50_Q11W09 Transcriptional regulator n=2 Tax=Bacteroidetes RepID=Q11W09_CYTH3 Length = 355 Score = 167 bits (424), Expect = 3e-40, Method: Composition-based stats. Identities = 31/207 (14%), Positives = 69/207 (33%), Gaps = 9/207 (4%) Query: 7 KDCFLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDFFAA 66 +S ++ F + + EG + + L+++ G+ + Y T +GR + + Sbjct: 147 NQELEKLISDQRKISRFKKKQILYSEGNKANSLYFIVSGKLKTYKTNDDGRELITGLYKE 206 Query: 67 PCFIGEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKNYRN 126 F+G + L++ + +++ +P + +L + K LS Sbjct: 207 GDFLGYMNLLEGSDHTESAMMLDDSEIHIIPKDEFFAVLFSSKDVSEKFIKMLSDNLIEK 266 Query: 127 IVSLTQNQSFPLVNRLAAFIL---------LSQEGDLYHEKHTQAAEYLGVSYRHLLYVL 177 L + + R+A + A G S ++ L Sbjct: 267 EERLLKLAYNSVRKRVAESLFMIYSNFHKDEDPSDFTMAIYRDDLAAIAGASKETVIRTL 326 Query: 178 AQFIHDGLLIKSKKGYLIKNRKQLSGL 204 + F +GL+ I N +L + Sbjct: 327 SDFKDEGLISIQGSKISIINLDKLQKM 353 >UniRef50_Q51661 Fnr-like transcriptional activator n=2 Tax=Paracoccus denitrificans RepID=Q51661_PARDE Length = 224 Score = 167 bits (424), Expect = 3e-40, Method: Composition-based stats. Identities = 32/210 (15%), Positives = 70/210 (33%), Gaps = 7/210 (3%) Query: 4 SAFKDCFLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDF 63 + + D + + + I +G +F + G +L NG +++ Sbjct: 16 NGLTPEMRDKLLKDAQRRSYREGETIFLQGDPARAVFIVLNGFIKLSRLTPNGSEAVVAI 75 Query: 64 FAAPCFIGEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKN 123 E ++ P + +AI +C L + R LL + F L + Sbjct: 76 LGRNRSFAEAMVLRGTPYPVSAEAISDCTVLQIDGARLRQFLLENQEFAIGLLASTFVHL 135 Query: 124 YRNIVSLTQNQSFPLVNRLAAFILLSQE------GDLYHEKHTQAAEYLGVSYRHLLYVL 177 + + + ++ V R+A F+ + A +LG+ L Sbjct: 136 QGLVDQIERLKAHTGVQRVAQFLADLSDAVAGPAEVRLPYNKRLIAGHLGMQPESLSRAF 195 Query: 178 AQFIHDGLLIKSKKGYLIKNRKQLSGLALE 207 A+ G + +I + +L +A++ Sbjct: 196 ARLRKHG-VEIEADKAMIADIAELRMMAMD 224 >UniRef50_A1B7P5 Putative transcriptional regulator, Crp/Fnr family n=1 Tax=Paracoccus denitrificans PD1222 RepID=A1B7P5_PARDP Length = 236 Score = 167 bits (423), Expect = 3e-40, Method: Composition-based stats. Identities = 33/222 (14%), Positives = 71/222 (31%), Gaps = 16/222 (7%) Query: 4 SAFKDCFLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDF 63 + D L + + +R H I++ G+ + ++ G +GR + Sbjct: 17 AGLPDEVLAGIESGSRRRHADRGQLIIERGEPGDSVLFVLSGHVLAVQWTRSGREIVYSE 76 Query: 64 FAAPCFIGEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKN 123 A GE+ ++ ++ A C L P L+ + + L + Sbjct: 77 IAPGSAFGELSVLSGMPRSLSLYARTACVLLETPGTLLTGLMDTQPQVRQAVIQDLVRRI 136 Query: 124 YRNIVSLTQNQSFPLVNRLAAFILLSQ---------EGDLYHEKHTQAAEYLGVSYRHLL 174 + + + + + RL A++L H + A +G + + Sbjct: 137 HDLTERVQELTALDVEERLRAYLLRVSLEHGGLEPGRRMPDPPTHAEMANIIGANREAVS 196 Query: 175 YVLAQFIHDGLLIKSKKGYLIKNRKQLSGLALEMDPENKFSG 216 LA+ G++ +K I L P++ G Sbjct: 197 RALAKLSRAGIIESGRKYLRIMQPDALI-------PDDTGRG 231 >UniRef50_B7H3W0 Cyclic nucleotide-binding domain protein n=14 Tax=Acinetobacter RepID=B7H3W0_ACIB3 Length = 235 Score = 167 bits (423), Expect = 3e-40, Method: Composition-based stats. Identities = 38/212 (17%), Positives = 70/212 (33%), Gaps = 9/212 (4%) Query: 4 SAFKDCFLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDF 63 S + F + + F Y+ + ++ + G L NG +L Sbjct: 21 SVLLEVFQKFILEHGKQITFEKNSYVFHAQDEFDGIYTVLEGSISLGYVDVNGNEALSAI 80 Query: 64 FAAPCFIGEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKN 123 + GEI LID + A+++ L +P K LL + S K Sbjct: 81 AEPIMWFGEISLIDHEPRSHDAIALKKSIVLHIPAKPLNELLKEHPYYWYYFARLTSQKL 140 Query: 124 YRNIVSLTQNQSFPLVNRLAAFILLSQEG---------DLYHEKHTQAAEYLGVSYRHLL 174 + Q+ + RLA +L EG Q A L S + + Sbjct: 141 RYVFLEQIAIQTRSISQRLAQRLLFILEGYGNHILIQDHHIQISQEQLANMLTTSRQTIN 200 Query: 175 YVLAQFIHDGLLIKSKKGYLIKNRKQLSGLAL 206 + L+ ++ + + I + ++L +A Sbjct: 201 HELSLLEKQNIIKIAFRKIEILDIEKLKVIAQ 232 >UniRef50_B7H5E4 Catabolite gene activator n=39 Tax=Bacillus cereus group RepID=B7H5E4_BACC4 Length = 231 Score = 167 bits (423), Expect = 4e-40, Method: Composition-based stats. Identities = 49/208 (23%), Positives = 101/208 (48%), Gaps = 8/208 (3%) Query: 8 DCFLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDFFAAP 67 + F +A +L HF + I + L+++ +G+ ++Y G+ ++ F Sbjct: 19 EIFSEIDTAYFQLNHFEKGELICNIDDEMDRLYFVVKGKVKVYTITPEGKKLILRFINPL 78 Query: 68 CFIGEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKNYRNI 127 +G+IELI V+A + +++ R LL+D +F++ L +++ + Sbjct: 79 AIVGDIELIQNSKAHNVVEACSDVVAISISNTVIRNKLLHDPIFMKFLLENIANTLKIST 138 Query: 128 VSLTQNQSFPLVNRLAAFILLSQ--------EGDLYHEKHTQAAEYLGVSYRHLLYVLAQ 179 N +P+ R+A+++L +GDL T A+++GVSYRH++ VL + Sbjct: 139 RFTALNLLYPVEVRVASYLLSISTDSNGNMYKGDLDATSVTSIADFIGVSYRHVIRVLQR 198 Query: 180 FIHDGLLIKSKKGYLIKNRKQLSGLALE 207 F ++ L+ KS +IK+ ++ +A + Sbjct: 199 FYNEKLIEKSNGVIVIKDFSRMKEVAKD 226 >UniRef50_C2CK26 Transcriptional regulator n=1 Tax=Anaerococcus tetradius ATCC 35098 RepID=C2CK26_9FIRM Length = 215 Score = 166 bits (422), Expect = 4e-40, Method: Composition-based stats. Identities = 45/206 (21%), Positives = 83/206 (40%), Gaps = 8/206 (3%) Query: 5 AFKDCFLTDVSADT--RLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLID 62 K+ + ++ L + +I +G+ L+ L GR ++Y G+ +I Sbjct: 11 NLKNEEIEEIKKIADLNLITYPKDSHIFTKGEIKDDLYCLIAGRIKVYKIDPEGKRYIIA 70 Query: 63 FFAAPCFIGEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLL--LNDTLFLRKLCVTLS 120 F P GE+ ++ QA + L + K +R L+ T F L+ Sbjct: 71 SFDKPAIFGEVYAYLREPFDFWAQADVDSKVLVI--KDFRKLINTSKSTNFRINFIEILA 128 Query: 121 HKNYRNIVSLTQNQSFPLVNRLAAFILLSQEGDL--YHEKHTQAAEYLGVSYRHLLYVLA 178 K+ + N L ++AAF+L +++ DL + A+YL + L L+ Sbjct: 129 RKSLKLSKKNQMNSQANLKQKIAAFLLDNEKDDLVKLTISREEWADYLATTRPSLSRSLS 188 Query: 179 QFIHDGLLIKSKKGYLIKNRKQLSGL 204 + GL+ K I++RK L + Sbjct: 189 EMAKKGLIRIEDKLIRIEDRKSLEAM 214 >UniRef50_Q38UP6 Putative transcriptional regulator, Flp/Fnr family n=1 Tax=Lactobacillus sakei subsp. sakei 23K RepID=Q38UP6_LACSS Length = 222 Score = 166 bits (422), Expect = 4e-40, Method: Composition-based stats. Identities = 38/206 (18%), Positives = 69/206 (33%), Gaps = 6/206 (2%) Query: 4 SAFKDCFLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDF 63 S L +SA T ++ L L G ++Y A G+ L+ Sbjct: 17 SHLDHDSLLKISALTHHEKITKGQQVISP-TAQKRLVILASGSIKVYQLSAAGKEQLLRI 75 Query: 64 FAAPCFIGEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKN 123 F GE L E +A+++ LP ++ LLL KL ++K Sbjct: 76 MEPGDFEGEKLLFTNQEEQVYGEALQDSVICTLPRAPFQELLLTYPEISLKLLEVTANKM 135 Query: 124 YRNIVSLTQNQSFPLVNRLAAFILLSQE-----GDLYHEKHTQAAEYLGVSYRHLLYVLA 178 + + +R+ ++L + K + A Y+G + L L Sbjct: 136 IKLEQQANLMNIESVESRIVTYLLALVKVSETLTVKIPMKLKELATYIGTTPETLSRQLK 195 Query: 179 QFIHDGLLIKSKKGYLIKNRKQLSGL 204 Q L+ + + I + ++L Sbjct: 196 QLEQRQLIKRQGRQVEILDYERLEDF 221 >UniRef50_Q0VP50 Transcriptional regulator Anr n=3 Tax=Gammaproteobacteria RepID=Q0VP50_ALCBS Length = 230 Score = 166 bits (422), Expect = 4e-40, Method: Composition-based stats. Identities = 34/210 (16%), Positives = 73/210 (34%), Gaps = 10/210 (4%) Query: 4 SAFKDCFLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDF 63 + F D L + + R+ F A I ++G+ S L + G+ R+ + A G+ +++ Sbjct: 15 AGFPDEALHEAARHARVRAFQAHQPIYEKGEPQSNLCVIAEGQVRISSVNAQGQEAVLII 74 Query: 64 FAAPCFIGEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKN 123 F + G+ A E + +P ++R LL + +S + Sbjct: 75 FDRGTWFGDAVFSPGAGRVYGATAQEAAVLVEVPGPYFRDLLQRYPQSYPVVLDLISQRL 134 Query: 124 YRNIVSLTQNQSFPLVNRLAAFILLSQE----------GDLYHEKHTQAAEYLGVSYRHL 173 + I + ++ R+ +L + A +G++ + + Sbjct: 135 WSAISMIEEDALRGTQARIGQRLLFLSQMQRGGKPEGGPVTVRLTREHIANMMGMTRQGV 194 Query: 174 LYVLAQFIHDGLLIKSKKGYLIKNRKQLSG 203 L F GL+ I++ L Sbjct: 195 HRTLKNFEAQGLITLGYGRITIEDEATLRE 224 >UniRef50_D1B0A9 Cyclic nucleotide-binding protein n=1 Tax=Sulfurospirillum deleyianum DSM 6946 RepID=D1B0A9_SULD5 Length = 212 Score = 166 bits (422), Expect = 5e-40, Method: Composition-based stats. Identities = 39/200 (19%), Positives = 78/200 (39%), Gaps = 2/200 (1%) Query: 4 SAFKDCFLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDF 63 S L + + + + A++ + EG +P +L L +G ++Y T G+ + Sbjct: 11 SKLTAEQLEKLKKISVIKKYHAKEILFYEGDEPLYLHVLLQGTLKVYKTNHKGQQIFLHE 70 Query: 64 FAAPCFIGEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKN 123 F + E+ + P + + + L + K + ++ +L K+ Sbjct: 71 FYPGGLVAELANFENILYPATAEFMSDGEVLRIDYKALEKDFFKNPDISFEIIKSLIAKH 130 Query: 124 YRNIVSLTQNQSFPLVNRLAAFILLSQEGDLYHEKHTQAAEYLGVSYRHLLYVLAQFIHD 183 + + + ++A FIL + E K+TQ A L ++ L L++F Sbjct: 131 KILLDVIQKEVILTADAKVAKFILENSE-LFDTLKNTQIASLLNLTPETLSRTLSKFKAS 189 Query: 184 GLLIKSKK-GYLIKNRKQLS 202 GL+ K G I +R L Sbjct: 190 GLIEMDDKHGCHILDRSSLE 209 >UniRef50_A8UU26 cAMP-dependent transcriptional regulator n=1 Tax=Hydrogenivirga sp. 128-5-R1-1 RepID=A8UU26_9AQUI Length = 228 Score = 166 bits (421), Expect = 5e-40, Method: Composition-based stats. Identities = 29/197 (14%), Positives = 60/197 (30%), Gaps = 9/197 (4%) Query: 4 SAFKDCFLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDF 63 + L +S + + + E + S ++ + G+ R +G ++ Sbjct: 18 QNLPESDLRKISLKFKFIDLPMGEVLFYEKDESSDMYLVIEGKVRASLFDEHGNELVLAE 77 Query: 64 FAAPCFIGEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKN 123 F+GE+ +ID V A E L + + +L + + L + Sbjct: 78 LGPGEFLGEMSMIDGLPRSATVIAEEPTKLAVLSREAFLKILRENPDMSVNVIRALVARL 137 Query: 124 YRNIVSLTQNQSFPLVNRLAAFILLSQEGDLY---------HEKHTQAAEYLGVSYRHLL 174 R + + +R+ F+L H A +G S + Sbjct: 138 RRTDDMVEALAFRNVESRIVKFLLEVGRERGVMESGKFKVRKMTHRDLASRVGSSREAVT 197 Query: 175 YVLAQFIHDGLLIKSKK 191 L G++ S Sbjct: 198 KALKALTFKGVIEDSGN 214 >UniRef50_Q6MK23 Transcription regulator containing cAMP-binding domain n=1 Tax=Bdellovibrio bacteriovorus RepID=Q6MK23_BDEBA Length = 214 Score = 166 bits (421), Expect = 5e-40, Method: Composition-based stats. Identities = 29/195 (14%), Positives = 68/195 (34%), Gaps = 5/195 (2%) Query: 7 KDCFLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDFFAA 66 ++ + + + + + ++ + LF +T+G ++ NG+ ++ A Sbjct: 16 EEDVTEQILSVIQKKTYPKNALLFEQEDESKGLFLITKGTVKISKISPNGKEIVLGLLGA 75 Query: 67 PCFIGEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKNYRN 126 GE L+ +D + E LP K + +L + L + + +L Sbjct: 76 GKTFGEGSLLGQDRQADTAATTEPTEVFYLPKKELQNILQKNPLLYQSVVASLVRWMANL 135 Query: 127 IVSLTQNQSFPLVNRLAAFILLSQEGDLYHE-----KHTQAAEYLGVSYRHLLYVLAQFI 181 + + R+ +++ Q K + A LG+ LA+ Sbjct: 136 NNVIENINTPSAKERVWSYLCRLQSEQNKPLLQLSGKKHEVALMLGLRPETFSRALAELE 195 Query: 182 HDGLLIKSKKGYLIK 196 ++G + + K I Sbjct: 196 NEGQIKMNHKQIQIL 210 >UniRef50_C8W1Q7 Transcriptional regulator, Crp/Fnr family n=2 Tax=Clostridiales RepID=C8W1Q7_DESAS Length = 222 Score = 166 bits (421), Expect = 5e-40, Method: Composition-based stats. Identities = 28/208 (13%), Positives = 75/208 (36%), Gaps = 14/208 (6%) Query: 1 MSESAFKDCFLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSL 60 + + F L + ++ D + +G LF + G +L G+ ++ Sbjct: 17 VEQQVFSQVCLKAAAK----KYYQRGDVLFHQGDPTDSLFLIKEGSFKLVRVNEEGKEAI 72 Query: 61 IDFFAAPCFIGEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLS 120 + +GE L K +P + A+E +L + ++ ++ +L Sbjct: 73 LQVAGKGEVLGEAALFRKGTQPASAIALETARVCSLSRQSLEQIIRESPDLAMQVIFSLG 132 Query: 121 HKNYRNIVSLTQNQSFPLVNRLAAFILLSQ----------EGDLYHEKHTQAAEYLGVSY 170 ++ Y +T+ ++ ++ ++ + A+++GVS Sbjct: 133 NRLYDTWEQVTELRTGSTREKVLNLLIRLSIEHGEPCPEGTKIKLYLTQQDIADFVGVSR 192 Query: 171 RHLLYVLAQFIHDGLLIKSKKGYLIKNR 198 + L + + + +K +++K+R Sbjct: 193 VMVAQTLKELSTRNYIDRVEKYFVLKDR 220 >UniRef50_B9M2U2 Transcriptional regulator, Crp/Fnr family n=2 Tax=Geobacter RepID=B9M2U2_GEOSF Length = 236 Score = 166 bits (421), Expect = 5e-40, Method: Composition-based stats. Identities = 32/203 (15%), Positives = 78/203 (38%), Gaps = 10/203 (4%) Query: 4 SAFKDCFLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDF 63 ++ D L+ + F + I+ E +++ ++ G+ ++ + +G+ ++ Sbjct: 26 ASLTDDQLSSLMGIIEEKKFFRNNVILWEEDTQRYMYIVSSGKVKVVQSSEDGKEHILAI 85 Query: 64 FAAPCFIGEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKN 123 + GE+ ++D P V A+E+ + + + LL + + +L L H+ Sbjct: 86 HKKGEYFGEMAILDGKTAPATVIAMEDSLIQLIARESFEKFLLQNEKVMNQLISMLCHRL 145 Query: 124 YRNIVSLTQNQSFPLVNRLAAFI--------LLSQEGDLYHEK--HTQAAEYLGVSYRHL 173 + + L R+ A + + + G + K H A Y VS + Sbjct: 146 RESWLMLKVMSFSSAEQRVRAVLDQLGKLNGVRDERGIIIALKLMHKDIAGYANVSRETV 205 Query: 174 LYVLAQFIHDGLLIKSKKGYLIK 196 +L +F + + Y++ Sbjct: 206 TRLLNRFAKESKIEILDNKYILL 228 >UniRef50_B5YI76 Catabolite gene activator n=1 Tax=Thermodesulfovibrio yellowstonii DSM 11347 RepID=B5YI76_THEYD Length = 224 Score = 166 bits (421), Expect = 6e-40, Method: Composition-based stats. Identities = 32/202 (15%), Positives = 68/202 (33%), Gaps = 10/202 (4%) Query: 4 SAFKDCFLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDF 63 D L +S + +I + ++ + L+ + G + G+ +++ Sbjct: 17 QNLSDEHLLLISKGFSINKVKEGKFIFYQSEESTDLYIILDGAVKACLLDPEGKELILNI 76 Query: 64 FAAPCFIGEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKN 123 F F GE+ L+D V A+++ L + + LL N+ + L L + Sbjct: 77 FKKGDFFGELSLLDGKPRSATVIALKDSVVGILKREQFLTLLKNNPMIAISLLSALVERI 136 Query: 124 YRNIVSLTQNQSFPLVNRLAAFILLSQEGD----------LYHEKHTQAAEYLGVSYRHL 173 L + R+ +IL + + + H + A G S + Sbjct: 137 RMTDEMLGAMAFLDVSRRILKYILNIAQKEGEKTEEGYIKINKITHRELASCTGASREAV 196 Query: 174 LYVLAQFIHDGLLIKSKKGYLI 195 L G++ + + I Sbjct: 197 TKALKILKFKGIIFEKNGHFFI 218 >UniRef50_Q09BB2 Cyclic nucleotide-binding:Bacterial regulatory protein, Crp n=2 Tax=Stigmatella aurantiaca DW4/3-1 RepID=Q09BB2_STIAU Length = 226 Score = 166 bits (421), Expect = 6e-40, Method: Composition-based stats. Identities = 34/205 (16%), Positives = 65/205 (31%), Gaps = 10/205 (4%) Query: 5 AFKDCFLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDFF 64 + L +S H D I Q+G + + L+ + G+ + G+ ++ Sbjct: 15 NLQAEDLEHLSTLLHTRHCAKGDVIFQQGDEGADLYIVRAGQVAIRLHSPEGKEVILTLL 74 Query: 65 AAPCFIGEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKNY 124 + GE+ L+D + A EE L+L + + L R L TLS Sbjct: 75 GSGEVFGELSLLDGEPRSTHAVAREETVLLSLRREDFHRFLDTRPQVARSLLATLSRLVR 134 Query: 125 RNIVSLTQNQSFPLVNRLAAFILLSQEG----------DLYHEKHTQAAEYLGVSYRHLL 174 R + RL +L ++ A G++ Sbjct: 135 RVTQHVHDATFLDARTRLVRVLLDLSRNQGEPRGQGVAIRQRLTQSELANLCGLTRESTN 194 Query: 175 YVLAQFIHDGLLIKSKKGYLIKNRK 199 L ++ +G+L + + Sbjct: 195 KWLRFYVREGMLSYEAGQITLLKPE 219 >UniRef50_B7V4B3 Transcriptional regulator Dnr n=10 Tax=Proteobacteria RepID=B7V4B3_PSEA8 Length = 227 Score = 166 bits (421), Expect = 6e-40, Method: Composition-based stats. Identities = 29/205 (14%), Positives = 68/205 (33%), Gaps = 8/205 (3%) Query: 6 FKDCFLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDFFA 65 L ++ A + L + Y+ ++G+ +YL G ++Y G+ +++ Sbjct: 20 LSPVQLQELLASSDLVNLDKGAYVFRQGEPAHAFYYLISGCVKIYRLTPEGQEKILEVTN 79 Query: 66 APCFIGEIELIDKDH-EPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKNY 124 E + QA+ K Y L ++T L LS + + Sbjct: 80 ERNTFAEAMMFMDTPNYVATAQAVVPSQLFRFSNKAYLRQLQDNTPLALALLAKLSTRLH 139 Query: 125 RNIVSLTQNQSFPLVNRLAAFILLSQE-------GDLYHEKHTQAAEYLGVSYRHLLYVL 177 + I + +R+ ++L A +L + ++ Sbjct: 140 QRIDEIETLSLKNATHRVVRYLLTLAAHAPGENCRVEIPVAKQLVAGHLSIQPETFSRIM 199 Query: 178 AQFIHDGLLIKSKKGYLIKNRKQLS 202 + +G++ + I +R++L Sbjct: 200 HRLGDEGIIRLDGREISILDRERLE 224 >UniRef50_A8LM13 Transcriptional regulator n=5 Tax=Rhodobacteraceae RepID=A8LM13_DINSH Length = 236 Score = 166 bits (421), Expect = 6e-40, Method: Composition-based stats. Identities = 31/210 (14%), Positives = 67/210 (31%), Gaps = 7/210 (3%) Query: 4 SAFKDCFLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDF 63 S D T + + + + + G+ ++ + G +LY NG +++ Sbjct: 16 SNCPDEVATKILKRSSVKRYDRGQVLFSHGEDAHSVYIVIDGWVKLYRITPNGSEAVVGV 75 Query: 64 FAAPCFIGEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKN 123 F GE + D P A +A + + +P ++ + + + Sbjct: 76 FTRGHSFGEAVALRNDTYPVAAEAATDVRVVQVPSAEVLNVMRSHPEVCIAILSSTFAHL 135 Query: 124 YRNIVSLTQNQSFPLVNRLAAFILLS------QEGDLYHEKHTQAAEYLGVSYRHLLYVL 177 + + + Q ++ R+A F+L + A +G+ L Sbjct: 136 HALVAEVEQLKARSGAQRVAQFLLSLVTCDEGSCRVMLPYDKILIAGRIGMKPESLSRAF 195 Query: 178 AQFIHDGLLIKSKKGYLIKNRKQLSGLALE 207 A+ G + + I L A E Sbjct: 196 ARLKSQG-VTIKQNHAEIACIDTLRDFADE 224 >UniRef50_C1SKM4 cAMP-binding protein n=1 Tax=Denitrovibrio acetiphilus DSM 12809 RepID=C1SKM4_9BACT Length = 218 Score = 166 bits (421), Expect = 6e-40, Method: Composition-based stats. Identities = 32/194 (16%), Positives = 68/194 (35%), Gaps = 4/194 (2%) Query: 7 KDCFLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDFFAA 66 + + R + + E ++ S +F+L +G +LY T GR +++ F + Sbjct: 19 DADLIKLLENVCRYRRVDKKQILFMENEEGSTVFFLVQGSIKLYRTNDEGREAVVHFVRS 78 Query: 67 PCFIGEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKNYRN 126 EI L P +EEC + + K ++ D + +L LS + Sbjct: 79 GEIFAEILLQLGLKYPVTSMTLEECDLVEIDAKKLEEIIAGDPMVSMRLIAALSRRIKYF 138 Query: 127 IVSLTQNQSFPLVNRLAAFILLSQEG----DLYHEKHTQAAEYLGVSYRHLLYVLAQFIH 182 + + + RL ++ ++ + A LG + VL + Sbjct: 139 VNLIESLTINDVRARLVNWLAAQKKKESKVIKLPVPKGELALLLGTTPETFSRVLKKLAE 198 Query: 183 DGLLIKSKKGYLIK 196 +G + + + Sbjct: 199 EGFIEVQGREIKVL 212 >UniRef50_C5ELS6 Transcriptional regulator n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5ELS6_9FIRM Length = 219 Score = 165 bits (420), Expect = 7e-40, Method: Composition-based stats. Identities = 31/210 (14%), Positives = 67/210 (31%), Gaps = 11/210 (5%) Query: 12 TDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDFFAAPCFIG 71 + + F + ++ +G ++ + GR R+ + +G C IG Sbjct: 7 NALIKGRKPAMFRKKAFLFHQGDPADAVYIVLSGRIRITSYQIDGEEKQFYIAEKGCLIG 66 Query: 72 EIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKNYRNIVSLT 131 E I + AI + +P + D R + + KN + + Sbjct: 67 EASCILGHPHSTSAVAIVDTEVYCIPHVELEAGMKADWELTRTVMRMMCRKNSISFNQVL 126 Query: 132 QNQSFPLVNRLAAFILLSQE-----------GDLYHEKHTQAAEYLGVSYRHLLYVLAQF 180 + V R+A ++ H + + S + V + F Sbjct: 127 ELSFTQSVQRVAQLVVHLCNQYGVKEDTGAVRIDIRFTHQDVSSMINTSRVTVSNVFSLF 186 Query: 181 IHDGLLIKSKKGYLIKNRKQLSGLALEMDP 210 +G+L K +++ + +L LA + Sbjct: 187 ADEGILEKVNGLFVVTDFGKLESLASGEEE 216 Database: uniref50.fasta Posted date: Mar 8, 2010 10:38 AM Number of letters in database: 1,040,396,356 Number of sequences in database: 3,077,464 Lambda K H 0.316 0.194 0.535 Lambda K H 0.267 0.0597 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 1,592,637,357 Number of Sequences: 3077464 Number of extensions: 87984108 Number of successful extensions: 370422 Number of sequences better than 1.0e-01: 250 Number of HSP's better than 0.1 without gapping: 5797 Number of HSP's successfully gapped in prelim test: 3021 Number of HSP's that attempted gapping in prelim test: 352426 Number of HSP's gapped (non-prelim): 11353 length of query: 219 length of database: 1,040,396,356 effective HSP length: 124 effective length of query: 95 effective length of database: 658,790,820 effective search space: 62585127900 effective search space used: 62585127900 T: 11 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 40 (20.6 bits) S2: 92 (39.5 bits)