 |
| Job Description | P0A9E9 | | Confidence | 95.23% | Date | Thu Jan 5 11:10:01 GMT 2012 |
| Rank | 177 | Aligned Residues | 77 |
| % Identity | 10% | Template | d2bv6a1 |
| SCOP info | DNA/RNA-binding 3-helical bundle
| "Winged helix" DNA-binding domain
| MarR-like transcriptional regulators
|
| Resolution | 2.8 |
|
 |
|   |   |
111 | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 |
| Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |
|
| Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence |   |
F | L | R | K | L | C | V | T | L | S | H | K | N | Y | R | N | I | V | S | L | T | Q | N | Q | S | F | P | L | V | N | R | L | A | A | F | I | L | L | S | Q | E | G | D | L | Y | H | E | K | H | T | Q | A | A | E | Y | L | G | V | S | Y | R | H | L | L | Y | V | L | A | Q | F | I | H | D | G | L | L | I | K | S | K |
| Query Conservation |   |
  |   |   |   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |   |
|
|   |
|
|   |
|
|   |
|   |
|   |   |
|   |   |   |
|
|
|   |   |   |   |
| Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Template Conservation |   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |   |
|   |   |
|
|   |   |
|   |   |   |   |   |   | . | . | . | . |
|   |   |
|
|
|   |   |
|   |   |   |   |   |   |
|
|   |   |
|   |   |
|   |   |   |
|
|
|   |
|   |   |
| Template Sequence |   |
L | C | F | S | L | Y | N | A | Q | R | Q | V | N | R | Y | Y | S | N | K | V | F | K | K | Y | N | L | T | Y | P | Q | F | L | V | L | T | I | L | W | D | E | S | P | V | . |
. |
. |
. |
N | V | K | K | V | V | T | E | L | A | L | D | T | G | T | V | S | P | L | L | K | R | X | E | Q | V | D | L | I | K | R | E | R |
| Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T |  |  |  |  | T |
|
|  |  |  |  |  |  |  |  |  |  |  |  | S | S |  |  | . | . | . | . |  |  |  |  |  |  |  |  | T | T |
|
| T | T | T |  |  |  |  |  |  |  |  |  |  | T | T | S |  |  |  |  |  |
| Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
| . | . | . | . |
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
| Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |
11 | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | |
|
|
|
. | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . |
|   |
|   |   |
191 |
| Predicted Secondary structure |   |
|
| Query SS confidence |   |
|
| Query Sequence |   |
K |
| Query Conservation |   |
  |
| Alig confidence |   |
|
| Template Conservation |   |
  |
| Template Sequence |   |
S |
| Template Known Secondary structure |   |
|
| Template Predicted Secondary structure |   |
|
| Template SS confidence |   |
|
|   |   |
87 |
|   |
No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
|   |
|
|
|