Phyre 2 alignment of P0ABC7 with d1qhva_

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Job Description | P0ABC7
Confidence | 3.56% | Date | Thu Jan 5 11:15:10 GMT 2012
Rank | 97 | Aligned Residues | 18
% Identity | 39% | Template | d1qhva_
SCOP info | Virus attachment protein globular domain | Virus attachment protein globular domain | Adenovirus fiber protein "knob" domain
Resolution | 1.51

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

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Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . |  |  |  |  |  |  |  |  |
Query Sequence |  | M | A | W | N | Q | P | G | N | N | G | Q | D | R | D | P | . | . | . | W | G | S | S | K | P | G | G | N
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  | . | . | . | . | . | . |  |  |  |  |  | . | . | . |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | T | I | G | N | . | . | . | . | . | . | K | N | D | D | K | L | T | L | W | T | T | P | D | P | S | P | N
Template Known Secondary structure |  |  |  | S |  | . | . | . | . | . | . |  |  |  | G | G | G |  |  |  | S |  | S | S |  |  | S |
Template Predicted Secondary structure |  |  |  |  |  | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 390 | . | . | . |  |  |  |  |  |  | . | . | . | . | . | . | 400 | . | . | . | . | . | . | . | . | . | 410

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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