19/01/2012 09:13:58 : INFO  : Run start: Thu Jan 19 09:13:56 GMT 2012
19/01/2012 09:14:10 : INFO  : Initialised job
19/01/2012 09:14:14 : INFO  : Renaming log file 'phyre2_20120119_091355.log' to '/bmm/www/servers/phyre2/public_html/phyre2_output/f60184711b331ed6/phyre_20120119_091355.log'
19/01/2012 09:14:17 : INFO  : Initialised job:
Sequence
>batch____
MAWNQPGNNGQDRDPWGSSKPGGNSEGNGNKGGRDQGPPDLDDIFRKLSKKLGGLGGGKG
TGSGGGSSSQGPRPQLGGRVVTIAAAAIVIIWAASGFYTIKEAERGVVTRFGKFSHLVEP
GLNWKPTFIDEVKPVNVEAVRELAASGVMLTSDENVVRVEMNVQYRVTNPEKYLYSVTSP
DDSLRQATDSALRGVIGKYTMDRILTEGRTVIRSDTQRELEETIRPYDMGITLLDVNFQA
ARPPEEVKAAFDDAIAARENEQQYIREAEAYTNEVQPRANGQAQRILEEARAYKAQTILE
AQGEVARFAKLLPEYKAAPEITRERLYIETMEKVLGNTRKVLVNDKGGNLMVLPLDQMLK
GGNAPAAKSDNGASNLLRLPPASSSTTSGASNTSSTSQGDIMDQRRANAQRNDYQRQGE

19/01/2012 09:14:20 : INFO  : Checked sequence
19/01/2012 09:14:30 : INFO  : Finding homologues with PSI-BLAST
19/01/2012 09:14:32 : INFO  : PSI-BLAST 3 iterations
19/01/2012 09:17:02 : INFO  : PSI-BLAST 5 iterations
19/01/2012 09:19:22 : INFO  : Finished PSI-BLAST
19/01/2012 09:19:26 : INFO  : Running Buildali to generate a3m file
19/01/2012 09:32:36 : INFO  : Converting to HMM
19/01/2012 09:32:44 : INFO  : Calibrating HMM
19/01/2012 09:33:08 : INFO  : Searching HMM database
19/01/2012 09:41:02 : INFO  : Finished buildali
19/01/2012 09:41:06 : INFO  : Predicting secondary structure
19/01/2012 09:41:25 : INFO  : Predicted secondary structure (PSI-Pred)
19/01/2012 09:41:29 : INFO  : Predicting Disordered regions
19/01/2012 09:41:39 : INFO  : Predicted Disorder (Disopred)
19/01/2012 09:41:43 : INFO  : Running memsat_svm check
19/01/2012 09:49:48 : INFO  : Running memsat_svm full
19/01/2012 09:58:24 : INFO  : Predicted Transmembrane (memsat_svm) ID 'f60184711b331ed6'
19/01/2012 09:58:28 : INFO  : Initialising fold library search
19/01/2012 09:58:35 : INFO  : Initialised search input
19/01/2012 09:58:40 : INFO  : Building Ensemble models
19/01/2012 09:58:47 : INFO  : Building hh.c3bk6C_.model.1.pdb
19/01/2012 09:59:20 : INFO  : Building hh.c2zv4O_.model.2.pdb
19/01/2012 09:59:46 : INFO  : cpying /bmm/www/servers/phyre2/public_html/phyre2_output/f60184711b331ed6/hh.c2zv4O_.model.2.pdb to /bmm/www/servers/phyre2/public_html/phyre2_output/f60184711b331ed6/c2zv4O_.4.pdb
19/01/2012 09:59:54 : INFO  : Building c3bk6C_.1.pdb
19/01/2012 10:00:25 : INFO  : Building c2rpbA_.2.pdb
19/01/2012 10:00:55 : INFO  : Building d1wina_.3.pdb
19/01/2012 10:01:25 : INFO  : Building c2zv4O_.4.pdb
19/01/2012 10:01:58 : INFO  : Building c2kk7A_.5.pdb
19/01/2012 10:02:28 : INFO  : Building c2k88A_.6.pdb
19/01/2012 10:02:59 : INFO  : Building d1l2pa_.7.pdb
19/01/2012 10:03:30 : INFO  : Building c2kepA_.8.pdb
19/01/2012 10:04:02 : INFO  : Building c3k5bE_.9.pdb
19/01/2012 10:04:32 : INFO  : Building c3u5gB_.10.pdb
19/01/2012 10:05:05 : INFO  : Building c1wd6B_.11.pdb
19/01/2012 10:05:38 : INFO  : Building d1t92a_.12.pdb
19/01/2012 10:06:10 : INFO  : Building c2i7uA_.13.pdb
19/01/2012 10:06:42 : INFO  : Building c3fu1B_.14.pdb
19/01/2012 10:07:13 : INFO  : Building c2xzm4_.15.pdb
19/01/2012 10:07:44 : INFO  : Building c2vgpD_.16.pdb
19/01/2012 10:08:16 : INFO  : Building d2hiqa1.17.pdb
19/01/2012 10:08:47 : INFO  : Building d1tf5a1.18.pdb
19/01/2012 10:09:18 : INFO  : Building c3k5bB_.19.pdb
19/01/2012 10:09:49 : INFO  : Building c1tt9B_.20.pdb
19/01/2012 10:11:38 : INFO  : Finished HH model building
19/01/2012 10:11:41 : WARN  : Set python to /bmm/www/servers/phyre2/bin//newpython/python2.6
19/01/2012 10:13:35 : INFO  : html domain output complete ID 'f60184711b331ed6'
19/01/2012 10:31:27 : INFO  : Run end  : Thu Jan 19 10:31:25 GMT 2012
