Phyre 2 alignment of P0ABC7 with d1tf5a1

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Job Description | P0ABC7
Confidence | 11.30% | Date | Thu Jan 5 11:15:10 GMT 2012
Rank | 18 | Aligned Residues | 26
% Identity | 23% | Template | d1tf5a1
SCOP info | Pre-protein crosslinking domain of SecA | Pre-protein crosslinking domain of SecA | Pre-protein crosslinking domain of SecA
Resolution | 2.18

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

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Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  | . | . |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  | . | . |  |  |  |  |  |  |  |
Query Sequence |  | Y | T | I | K | E | A | E | R | G | V | V | T | R | F | . | G | K | F | S | . | . | H | L | V | E | P | G | L | N
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  | . | . |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  | . | . |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | Y | V | V | E | D | G | Q | V | V | I | V | D | S | F | T | G | R | L | M | K | G | R | R | Y | S | E | G | L | H
Template Known Secondary structure |  |  |  |  |  | T | T |  |  |  |  | B |  | T | T | T |  |  | B |  | T | T |  |  |  | S | T | T |  |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 306 | . | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 | . | . | . | . | . | . | . | . | . | 330 | . | . | . | .

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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