Phyre 2 Results for P0ABC7

Email | l.a.kelley@imperial.ac.uk
Description | P0ABC7
Date | Thu Jan 5 11:15:10 GMT 2012
Unique Job ID | f60184711b331ed6

Detailed template information |

# | Template | Alignment Coverage | 3D Model | Confidence | % i.d. | Template Information
--- | --- | --- | --- | --- | --- | ---
1 | c3bk6C_ |
|  | 99.9 | 25 | PDB header:membrane protein Chain: C: PDB Molecule:ph stomatin; PDBTitle: crystal structure of a core domain of stomatin from2 pyrococcus horikoshii
2 | c2rpbA_ |
|  | 99.8 | 25 | PDB header:membrane protein Chain: A: PDB Molecule:hypothetical membrane protein; PDBTitle: the solution structure of membrane protein
3 | d1wina_ |
|  | 99.7 | 14 | Fold:EF-Ts domain-like Superfamily:Band 7/SPFH domain Family:Band 7/SPFH domain
4 | c2zv4O_ |
|  | 98.1 | 20 | PDB header:structural protein Chain: O: PDB Molecule:major vault protein; PDBTitle: the structure of rat liver vault at 3.5 angstrom resolution
5 | c2kk7A_ |
|  | 80.5 | 26 | PDB header:hydrolase Chain: A: PDB Molecule:v-type atp synthase subunit e; PDBTitle: nmr solution structure of the n terminal domain of subunit e2 (e1-52) of a1ao atp synthase from methanocaldococcus3 jannaschii
6 | c2k88A_ |
|  | 51.3 | 29 | PDB header:hydrolase Chain: A: PDB Molecule:vacuolar proton pump subunit g; PDBTitle: association of subunit d (vma6p) and e (vma4p) with g2 (vma10p) and the nmr solution structure of subunit g (g1-3 59) of the saccharomyces cerevisiae v1vo atpase
7 | d1l2pa_ |
|  | 49.5 | 28 | Fold:Single transmembrane helix Superfamily:F1F0 ATP synthase subunit B, membrane domain Family:F1F0 ATP synthase subunit B, membrane domain
8 | c2kepA_ |
|  | 44.4 | 41 | PDB header:transport protein Chain: A: PDB Molecule:general secretion pathway protein g; PDBTitle: solution structure of xcpt, the main component of the type 22 secretion system of pseudomonas aeruginosa
9 | c3k5bE_ |
|  | 43.5 | 13 | PDB header:hydrolase Chain: E: PDB Molecule:v-type atp synthase subunit e; PDBTitle: crystal structure of the peripheral stalk of thermus thermophilus h+-2 atpase/synthase
10 | c3u5gB_ |
|  | 33.8 | 17 | PDB header:ribosome Chain: B: PDB Molecule:40s ribosomal protein s1-a; PDBTitle: the structure of the eukaryotic ribosome at 3.0 a resolution
11 | c1wd6B_ |
|  | 27.9 | 42 | PDB header:structural genomics, unknown function Chain: B: PDB Molecule:protein ydhr; PDBTitle: crystal structure of jw1657 from escherichia coli
12 | d1t92a_ |
|  | 25.9 | 29 | Fold:Pili subunits Superfamily:Pili subunits Family:Pseudopilin
13 | c2i7uA_ |
|  | 25.0 | 36 | PDB header:de novo protein/ligand binding protein Chain: A: PDB Molecule:four-alpha-helix bundle; PDBTitle: structural and dynamical analysis of a four-alpha-helix2 bundle with designed anesthetic binding pockets
14 | c3fu1B_ |
|  | 19.2 | 24 | PDB header:protein transport Chain: B: PDB Molecule:general secretion pathway protein g; PDBTitle: crystal structure of the major pseudopilin from the type 2 secretion2 system of vibrio cholerae
15 | c2xzm4_ |
|  | 18.9 | 14 | PDB header:ribosome Chain: 4: PDB Molecule:40s ribosomal protein s3a; PDBTitle: crystal structure of the eukaryotic 40s ribosomal2 subunit in complex with initiation factor 1. this file3 contains the 40s subunit and initiation factor for4 molecule 1
16 | c2vgpD_ |
|  | 12.8 | 33 | PDB header:transferase Chain: D: PDB Molecule:inner centromere protein a; PDBTitle: crystal structure of aurora b kinase in complex with a2 aminothiazole inhibitor
17 | d2hiqa1 |
|  | 12.6 | 42 | Fold:Ferredoxin-like Superfamily:Dimeric alpha+beta barrel Family:Hypothetical protein YdhR
18 | d1tf5a1 |
|  | 11.3 | 23 | Fold:Pre-protein crosslinking domain of SecA Superfamily:Pre-protein crosslinking domain of SecA Family:Pre-protein crosslinking domain of SecA
19 | c3k5bB_ |
|  | 11.0 | 22 | PDB header:hydrolase Chain: B: PDB Molecule:v-type atp synthase, subunit (vapc-therm); PDBTitle: crystal structure of the peripheral stalk of thermus thermophilus h+-2 atpase/synthase
20 | c1tt9B_ |
|  | 10.9 | 14 | PDB header:transferase, lyase Chain: B: PDB Molecule:formimidoyltransferase-cyclodeaminase PDBTitle: structure of the bifunctional and golgi associated2 formiminotransferase cyclodeaminase octamer
21 | c3kdpD_ |
| not modelled | 10.5 | 18 | PDB header:hydrolase Chain: D: PDB Molecule:sodium/potassium-transporting atpase subunit beta-1; PDBTitle: crystal structure of the sodium-potassium pump
22 | d1htjf_ |
| not modelled | 9.1 | 15 | Fold:Regulator of G-protein signaling, RGS Superfamily:Regulator of G-protein signaling, RGS Family:Regulator of G-protein signaling, RGS
23 | c1htjF_ |
| not modelled | 9.1 | 15 | PDB header:signaling protein Chain: F: PDB Molecule:kiaa0380; PDBTitle: structure of the rgs-like domain from pdz-rhogef
24 | c3swfA_ |
| not modelled | 8.2 | 40 | PDB header:transport protein Chain: A: PDB Molecule:cgmp-gated cation channel alpha-1; PDBTitle: cnga1 621-690 containing clz domain
25 | d5ruba2 |
| not modelled | 7.3 | 25 | Fold:Ferredoxin-like Superfamily:RuBisCO, large subunit, small (N-terminal) domain Family:Ribulose 1,5-bisphosphate carboxylase-oxygenase
26 | c1jsuC_ |
| not modelled | 7.1 | 32 | PDB header:complex (transferase/cyclin/inhibitor) Chain: C: PDB Molecule:p27; PDBTitle: p27(kip1)/cyclin a/cdk2 complex
27 | c2w2hD_ |
| not modelled | 6.8 | 32 | PDB header:rna-binding protein Chain: D: PDB Molecule:protein tat; PDBTitle: structural basis of transcription activation by the cyclin2 t1-tat-tar rna complex from eiav
28 | d1wuua1 |
| not modelled | 6.8 | 10 | Fold:Ribosomal protein S5 domain 2-like Superfamily:Ribosomal protein S5 domain 2-like Family:GHMP Kinase, N-terminal domain
29 | c3s93B_ |
| not modelled | 6.5 | 11 | PDB header:transcription Chain: B: PDB Molecule:tudor domain-containing protein 5; PDBTitle: crystal structure of conserved motif in tdrd5
30 | d1wmda1 |
| not modelled | 6.4 | 11 | Fold:Galactose-binding domain-like Superfamily:Galactose-binding domain-like Family:Proprotein convertase P-domain
31 | c2jp3A_ |
| not modelled | 6.4 | 36 | PDB header:transcription Chain: A: PDB Molecule:fxyd domain-containing ion transport regulator 4; PDBTitle: solution structure of the human fxyd4 (chif) protein in sds2 micelles
32 | c2ptmA_ |
| not modelled | 6.4 | 10 | PDB header:transport protein Chain: A: PDB Molecule:hyperpolarization-activated (ih) channel; PDBTitle: structure and rearrangements in the carboxy-terminal region of spih2 channels
33 | c2jo1A_ |
| not modelled | 6.3 | 24 | PDB header:hydrolase regulator Chain: A: PDB Molecule:phospholemman; PDBTitle: structure of the na,k-atpase regulatory protein fxyd1 in2 micelles
34 | d2o4ta1 |
| not modelled | 6.3 | 6 | Fold:Left-handed superhelix Superfamily:BH3980-like Family:BH3980-like
35 | d1o5ha_ |
| not modelled | 6.1 | 19 | Fold:Methenyltetrahydrofolate cyclohydrolase-like Superfamily:Methenyltetrahydrofolate cyclohydrolase-like Family:Methenyltetrahydrofolate cyclohydrolase-like
36 | d2ozla1 |
| not modelled | 6.0 | 20 | Fold:Thiamin diphosphate-binding fold (THDP-binding) Superfamily:Thiamin diphosphate-binding fold (THDP-binding) Family:Branched-chain alpha-keto acid dehydrogenase PP module
37 | c1y4cA_ |
| not modelled | 5.8 | 15 | PDB header:de novo protein Chain: A: PDB Molecule:maltose binding protein fused with designed PDBTitle: designed helical protein fusion mbp
38 | c2kncB_ |
| not modelled | 5.7 | 13 | PDB header:cell adhesion Chain: B: PDB Molecule:integrin beta-3; PDBTitle: platelet integrin alfaiib-beta3 transmembrane-cytoplasmic2 heterocomplex
39 | d1fftb2 |
| not modelled | 5.7 | 7 | Fold:Transmembrane helix hairpin Superfamily:Cytochrome c oxidase subunit II-like, transmembrane region Family:Cytochrome c oxidase subunit II-like, transmembrane region
40 | d1nkta1 |
| not modelled | 5.5 | 14 | Fold:Pre-protein crosslinking domain of SecA Superfamily:Pre-protein crosslinking domain of SecA Family:Pre-protein crosslinking domain of SecA
41 | c1o7fA_ |
| not modelled | 5.5 | 17 | PDB header:regulation Chain: A: PDB Molecule:camp-dependent rap1 guanine-nucleotide exchange PDBTitle: crystal structure of the regulatory domain of epac2
42 | c2k6iA_ |
| not modelled | 5.5 | 34 | PDB header:structural protein Chain: A: PDB Molecule:uncharacterized protein mj0223; PDBTitle: the domain features of the peripheral stalk subunit h of the2 methanogenic a1ao atp synthase and the nmr solution3 structure of h1-47
43 | c2zxeB_ |
| not modelled | 5.4 | 21 | PDB header:hydrolase/transport protein Chain: B: PDB Molecule:na+,k+-atpase beta subunit; PDBTitle: crystal structure of the sodium - potassium pump in the e2.2k+.pi2 state
44 | d1ykwa2 |
| not modelled | 5.4 | 21 | Fold:Ferredoxin-like Superfamily:RuBisCO, large subunit, small (N-terminal) domain Family:Ribulose 1,5-bisphosphate carboxylase-oxygenase
45 | c3nngA_ |
| not modelled | 5.3 | 21 | PDB header:structural genomics, unknown function Chain: A: PDB Molecule:uncharacterized protein; PDBTitle: crystal structure of the f5/8 type c domain of q5lfr2_bacfn protein2 from bacteroides fragilis. northeast structural genomics consortium3 target bfr258e
46 | d1e3pa2 |
| not modelled | 5.3 | 39 | Fold:OB-fold Superfamily:Nucleic acid-binding proteins Family:Cold shock DNA-binding domain-like
47 | c9paiB_ |
| not modelled | 5.3 | 15 | PDB header:hydrolase inhibitor Chain: B: PDB Molecule:protein (plasminogen activator inhibitor-1) residues 365- PDBTitle: cleaved substrate variant of plasminogen activator inhibitor-1
48 | c2axcA_ |
| not modelled | 5.3 | 18 | PDB header:hydrolase Chain: A: PDB Molecule:colicin e7; PDBTitle: crystal structure of cole7 translocation domain
49 | c3i24B_ |
| not modelled | 5.1 | 17 | PDB header:hydrolase Chain: B: PDB Molecule:hit family hydrolase; PDBTitle: crystal structure of a hit family hydrolase protein from2 vibrio fischeri. northeast structural genomics consortium3 target id vfr176
50 | d2hsga1 |
| not modelled | 5.1 | 21 | Fold:lambda repressor-like DNA-binding domains Superfamily:lambda repressor-like DNA-binding domains Family:GalR/LacI-like bacterial regulator