11 c1q78A_ Probab=86.51   E-value=1.4  Score=20.66  Aligned_columns=72  Identities=14%

Q ss_pred             HHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHH
Q ss_conf             99999999999998618765556767787799975575642388023300687624886544333232437889999999
Q batch____       654 IDAVVQQAWVQMVARYGKPNHLNEREGRGFAVVGYGKLGGWELGYSSDLDLIFLHDCPMDAMTDGEREIDGRQFYLRLAQ  733 (946)
Q Consensus       654 l~~~l~~a~~~l~~r~G~p~~~~~~p~~~~avia~GklGg~El~~~SDlDlvfi~~~~~~~~~~g~~~~~~~~~f~rLaq  733 (946)
                      +++++.--..+...+.|.|......+  +.-|..+||++-+=-+.+||+|++.+          +++.++...||..+.+
T Consensus        49 L~~iv~~~v~~~~~~~~~~~~~~~~~--~~~i~~fGS~~lGv~~~~SDID~~~i----------~P~~i~~~~ff~~~~~  116 (468)
T c1q78A_          49 LNNLVKEWIREISESKNLPQSVIENV--GGKIFTFGSYRLGVHTKGADIDALCV----------APRHVDRSDFFTSFYD  116 (468)
T ss_dssp             HHHHHHHHHHHHHHHTTCCHHHHTTC--BCEEEEEHHHHHTCCCTTCCEEEEEE----------ECTTSCHHHHTTHHHH
T ss_pred             HHHHHHHHHHHHHHHCCCCCCHHCCC--CEEEEEEECCCCCCCCCCCCEEEEEE----------CCCCCCHHHHHHHHHH
T ss_conf             99999998666443114651000017--72899850424587889886579981----------4888898999999999


Q ss_pred             HHHH
Q ss_conf             9999
Q batch____       734 RIMH  737 (946)
Q Consensus       734 rii~  737 (946)
                      .+.+
T Consensus       117 ~L~~  120 (468)
T c1q78A_         117 KLKL  120 (468)
T ss_dssp             HHHT
T ss_pred             HHHC
T ss_conf             9732