Phyre 2 alignment of P77579 with c2d7cD_

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Job Description | P77579
Confidence | 1.47% | Date | Thu Jan 5 12:30:44 GMT 2012
Rank | 62 | Aligned Residues | 31
% Identity | 6% | Template | c2d7cD_
PDB info | PDB header:protein transport | Chain: D: PDB Molecule:rab11 family-interacting protein 3; | PDBTitle: crystal structure of human rab11 in complex with fip3 rab-2 binding domain
Resolution | 1.75 Å

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

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Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
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Query Sequence |  | A | A | A | A | V | K | N | P | Q | A | S | K | T | S | F | W | G | E | L | P | Q | H | V | M | S | G | I | S | R | M | V
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
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Template Sequence |  | S | R | D | E | L | X | E | A | I | Q | K | Q | E | E | I | N | F | R | L | Q | D | Y | I | D | R | I | I | V | A | I | X
Template Known Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 716 | . | . | . | 720 | . | . | . | . | . | . | . | . | . | 730 | . | . | . | . | . | . | . | . | . | 740 | . | . | . | . | . | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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