Phyre 2 alignment of P77579 with c2acmA_

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Job Description | P77579
Confidence | 1.73% | Date | Thu Jan 5 12:30:44 GMT 2012
Rank | 52 | Aligned Residues | 26
% Identity | 12% | Template | c2acmA_
PDB info | PDB header:structural protein | Chain: A: PDB Molecule:mucin-1; | PDBTitle: solution structure of the sea domain of human mucin 1 (muc1)
Resolution | UNK

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 21 | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | .
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Query Sequence |  | V | K | N | P | Q | A | S | K | T | S | F | W | G | E | L | P | Q | H | V | M | S | G | I | S | R | M
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | N | S | S | L | E | D | P | S | T | D | Y | Y | Q | E | L | Q | R | D | I | S | E | M | F | L | Q | I
Template Known Secondary structure |  |  | G | G | G | G |  | T | T | S |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 1055 | . | . | . | . | 1060 | . | . | . | . | . | . | . | . | . | 1070 | . | . | . | . | . | . | . | . | . | 1080

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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