08/01/2012 13:00:33 : INFO  : Run start: Sun Jan  8 13:00:31 GMT 2012
08/01/2012 13:00:40 : INFO  : Initialised job
08/01/2012 13:00:43 : INFO  : Renaming log file 'phyre2_20120108_130030.log' to '/bmm/www/servers/phyre2/public_html/phyre2_output/f59618b1c205036e/phyre_20120108_130030.log'
08/01/2012 13:00:45 : INFO  : Initialised job:
Sequence
>batch____
MTLEWWFAYLLTSIILSLSPGSGAINTMTTSLNHGYRGAVASIAGLQTGLAIHIVLVGVG
LGTLFSRSVIAFEVLKWAGAAYLIWLGIQQWRAAGAIDLKSLASTQSRRHLFQRAVFVNL
TNPKSIVFLAALFPQFIMPQQPQLMQYIVLGVTTIVVDIIVMIGYATLAQRIALWIKGPK
QMKALNKIFGSLFMLVGALLASARHA

08/01/2012 13:00:46 : INFO  : Checked sequence
08/01/2012 13:00:51 : INFO  : Finding homologues with PSI-BLAST
08/01/2012 13:00:52 : INFO  : PSI-BLAST 3 iterations
08/01/2012 13:02:34 : INFO  : PSI-BLAST 5 iterations
08/01/2012 13:04:44 : INFO  : Finished PSI-BLAST
08/01/2012 13:04:47 : INFO  : Running Buildali to generate a3m file
08/01/2012 13:14:38 : INFO  : Converting to HMM
08/01/2012 13:14:42 : INFO  : Calibrating HMM
08/01/2012 13:14:57 : INFO  : Searching HMM database
08/01/2012 13:18:52 : INFO  : Finished buildali
08/01/2012 13:18:54 : INFO  : Predicting secondary structure
08/01/2012 13:19:05 : INFO  : Predicted secondary structure (PSI-Pred)
08/01/2012 13:19:08 : INFO  : Predicting Disordered regions
08/01/2012 13:19:14 : INFO  : Predicted Disorder (Disopred)
08/01/2012 13:19:16 : INFO  : Running memsat_svm check
08/01/2012 13:23:06 : INFO  : Running memsat_svm full
08/01/2012 13:29:55 : INFO  : Predicted Transmembrane (memsat_svm) ID 'f59618b1c205036e'
08/01/2012 13:29:57 : INFO  : Initialising fold library search
08/01/2012 13:30:03 : INFO  : Initialised search input
08/01/2012 13:30:06 : INFO  : Building Ensemble models
08/01/2012 13:30:12 : INFO  : Building hh.d1xioa_.model.1.pdb
08/01/2012 13:30:36 : INFO  : Building d1xioa_.1.pdb
08/01/2012 13:30:56 : INFO  : Building c1xioA_.2.pdb
08/01/2012 13:31:17 : INFO  : Building c2jp3A_.3.pdb
08/01/2012 13:31:37 : INFO  : Building c2jo1A_.4.pdb
08/01/2012 13:31:57 : INFO  : Building c2kncA_.5.pdb
08/01/2012 13:32:19 : INFO  : Building c2zxeG_.6.pdb
08/01/2012 13:32:39 : INFO  : Building c2kegA_.7.pdb
08/01/2012 13:33:00 : INFO  : Building c3kdpH_.8.pdb
08/01/2012 13:33:19 : INFO  : Building c3kdpG_.9.pdb
08/01/2012 13:33:38 : INFO  : Building c2w8aC_.10.pdb
08/01/2012 13:34:00 : INFO  : Building d2vv5a3.11.pdb
08/01/2012 13:34:21 : INFO  : Building c2k9yB_.12.pdb
08/01/2012 13:34:41 : INFO  : Building c2k9yA_.13.pdb
08/01/2012 13:35:02 : INFO  : Building c2r1fB_.14.pdb
08/01/2012 13:35:25 : INFO  : Building c3qnqD_.15.pdb
08/01/2012 13:35:41 : INFO  : Building c1w8xP_.16.pdb
08/01/2012 13:36:03 : INFO  : Building c2kbvA_.17.pdb
08/01/2012 13:36:24 : INFO  : Building d1gjja2.18.pdb
08/01/2012 13:36:47 : INFO  : Building c3n23E_.19.pdb
08/01/2012 13:37:06 : INFO  : Building c2l35B_.20.pdb
08/01/2012 13:37:48 : INFO  : Finished HH model building
08/01/2012 13:37:50 : WARN  : Set python to /bmm/www/servers/phyre2/bin//newpython/python2.6
08/01/2012 13:40:19 : INFO  : html domain output complete ID 'f59618b1c205036e'
08/01/2012 13:46:21 : INFO  : Run end  : Sun Jan  8 13:46:19 GMT 2012
