 |
| Job Description | P13445 | | Confidence | 53.25% | Date | Thu Jan 5 11:33:34 GMT 2012 |
| Rank | 448 | Aligned Residues | 50 |
| % Identity | 16% | Template | d1ztra1 |
| SCOP info | DNA/RNA-binding 3-helical bundle
| Homeodomain-like
| Homeodomain
|
| Resolution | UNK |
|
|   |   |
266 | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | |
. | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . | . | 300 | . | . | . | . | . | . | . | . | . | 310 | . | . | . | . | . |
| Predicted Secondary structure |   |
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
| . |
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
| Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence |   |
L | N | A | K | Q | R | E | V | L | A | R | R | F | G | L | L | G | Y | . |
E | A | A | T | L | E | D | V | G | R | E | I | G | L | T | R | E | R | V | R | Q | I | Q | V | E | G | L | R | R | L | R | E |
| Query Conservation |   |
|   |   |
|
|
|   |
|
|   |   |
|
|
|
|   |   |   | . |   |   |   |
|
|   |
|
|
|   |   |
|
|
|
|   |   |   |
|
|
|
|   |   |   |
|
|   |
|
|
|   |
| Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Template Conservation |   |
|
|   |   |
|   |   |   |
|
|   |   |
|   |   |
|   |
|
|
|   |   |   |
|   |   |
|
|   |   |
|   |
|
|   |   |   |
|   |   |
|
|
|
|
|
|   |
|   |
|
|
| Template Sequence |   |
F | S | S | E | Q | L | A | R | A | K | R | E | F | N | E | N | R | Y | L | T | E | R | R | R | Q | Q | L | S | S | E | L | G | L | N | E | A | Q | I | K | I | W | F | Q | N | K | R | A | K | I | R | R |
| Template Known Secondary structure |   |
| S | S |  |  |  |  |  |  |  |  |  |  |  | T | T | T | S |  |  |  |  | T |  |  |  |  |  |  |  |  | T |
|
|  |  |  |  |  |  |  |  |  |  |  | T | T | S | S |
|
|
| Template Predicted Secondary structure |   |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
| Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |
8 | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . |
|   |
No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
|   |
|
|
|