BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= batch____ (137 letters) Database: uniref50.fasta 3,077,464 sequences; 1,040,396,356 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value UniRef50_P15070 Flagellar motor switch protein fliN n=15 Tax=Pro... 275 4e-73 UniRef50_P26419 Flagellar motor switch protein fliN n=125 Tax=En... 253 1e-66 UniRef50_P35539 Flagellar motor switch protein fliN (Fragment) n... 177 1e-43 UniRef50_Q47I10 Type III secretion system outer membrane O prote... 150 2e-35 UniRef50_Q0AEF2 Flagellar motor switch protein FliN n=12 Tax=Pro... 144 1e-33 UniRef50_Q3SIG7 Flagellar motor switch/type III secretory pathwa... 140 1e-32 UniRef50_A1WGY8 Flagellar motor switch protein FliN n=19 Tax=Pro... 140 1e-32 UniRef50_Q2NX05 Flagellar motor switch protein FliN n=5 Tax=Ente... 138 4e-32 UniRef50_Q31FQ0 Flagellar motor switch protein FliN n=5 Tax=Gamm... 129 4e-29 UniRef50_Q8D3E9 FliN protein n=3 Tax=Enterobacteriaceae RepID=Q8... 127 1e-28 UniRef50_B5YIZ3 Flagellar motor switch protein FliN n=1 Tax=Ther... 120 2e-26 UniRef50_Q2LT02 Flagellar motor switch protein n=2 Tax=Deltaprot... 118 5e-26 UniRef50_Q0AA08 Flagellar motor switch protein FliN n=49 Tax=cel... 114 7e-25 UniRef50_Q51466 Flagellar motor switch protein fliN n=23 Tax=Pro... 114 7e-25 UniRef50_D1B6B2 Flagellar motor switch protein FliN n=1 Tax=Ther... 113 2e-24 UniRef50_Q6MI47 Flagellar motor switch protein FliN n=2 Tax=Delt... 112 4e-24 UniRef50_C7ILI0 CheC, inhibitor of MCP methylation / FliN fusion... 111 6e-24 UniRef50_Q0AYM4 CheC, inhibitor of MCP methylation n=5 Tax=Firmi... 111 7e-24 UniRef50_B8CYQ5 CheC, inhibitor of MCP methylation n=1 Tax=Halot... 110 9e-24 UniRef50_D2LSG7 CheC, inhibitor of MCP methylation / FliN fusion... 110 1e-23 UniRef50_Q3BU42 Flagellar motor switch/type III secretory pathwa... 110 1e-23 UniRef50_A4J737 CheC, inhibitor of MCP methylation n=1 Tax=Desul... 110 1e-23 UniRef50_Q30VB8 Surface presentation of antigens (SPOA) protein ... 108 4e-23 UniRef50_A4IMA6 Flagellar motor switch protein n=8 Tax=Firmicute... 108 5e-23 UniRef50_C6BUR6 Flagellar motor switch protein FliN n=21 Tax=Pro... 108 6e-23 UniRef50_B8FK37 Flagellar motor switch protein FliN n=3 Tax=Bact... 107 8e-23 UniRef50_A5IJA7 CheC, inhibitor of MCP methylation n=5 Tax=Therm... 107 9e-23 UniRef50_B2A359 CheC, inhibitor of MCP methylation / FliN fusion... 107 1e-22 UniRef50_P24073 Flagellar motor switch phosphatase fliY n=8 Tax=... 106 2e-22 UniRef50_C9R9W6 CheC, inhibitor of MCP methylation / FliN fusion... 106 2e-22 UniRef50_B1YI92 CheC, inhibitor of MCP methylation / FliN fusion... 105 4e-22 UniRef50_C6D2V9 CheC, inhibitor of MCP methylation / FliN fusion... 105 4e-22 UniRef50_B9PA59 Predicted protein n=2 Tax=cellular organisms Rep... 105 5e-22 UniRef50_B0THB7 Flagellar motor switch protein flin, putative n=... 105 5e-22 UniRef50_A3DCN7 CheC, inhibitor of MCP methylation n=2 Tax=Clost... 104 7e-22 UniRef50_B5Y7F0 Flagellar motor switch phosphatase FliY (CheY-Pp... 103 1e-21 UniRef50_A6LMJ7 CheC, inhibitor of MCP methylation n=4 Tax=Therm... 103 2e-21 UniRef50_A8F896 Flagellar motor switch protein FliN n=3 Tax=Ther... 103 2e-21 UniRef50_B8FTQ8 CheC, inhibitor of MCP methylation / FliN fusion... 103 2e-21 UniRef50_C0ZF88 Flagellar motor switch protein FliY n=1 Tax=Brev... 103 2e-21 UniRef50_B0K9T5 CheC, inhibitor of MCP methylation / FliN fusion... 102 3e-21 UniRef50_C0R179 Flagellar motor switch protein n=2 Tax=Brachyspi... 102 3e-21 UniRef50_B2S3V9 Flagellar motor switch protein n=2 Tax=Treponema... 101 7e-21 UniRef50_A5D0K1 Flagellum motor switch protein n=4 Tax=Bacteria ... 101 7e-21 UniRef50_A6TRP4 CheC, inhibitor of MCP methylation n=11 Tax=Clos... 101 7e-21 UniRef50_A4A5Y8 Flagellar motor switch protein fliN n=3 Tax=uncl... 100 2e-20 UniRef50_C1TKI4 Flagellar motor switch protein FliN n=1 Tax=Deth... 99 3e-20 UniRef50_C1I888 Flagellar switch protein FliY n=1 Tax=Clostridiu... 98 8e-20 UniRef50_A9BEY5 CheC, inhibitor of MCP methylation / FliN fusion... 98 9e-20 UniRef50_C8W1I6 CheC, inhibitor of MCP methylation / FliN fusion... 97 1e-19 UniRef50_C2ED81 Flagellar motor switch protein FliY n=1 Tax=Lact... 97 2e-19 UniRef50_C4ZAN3 Flagellar motor switch protein n=2 Tax=Clostridi... 97 2e-19 UniRef50_B2V6S4 Flagellar motor switch protein FliN n=3 Tax=Sulf... 96 3e-19 UniRef50_C5VT98 Flagellar motor switch phosphatase FliY n=1 Tax=... 96 3e-19 UniRef50_Q89AZ3 Flagellar motor switch protein fliN n=1 Tax=Buch... 96 3e-19 UniRef50_A6W8L1 Flagellar motor switch protein FliN n=1 Tax=Kine... 96 4e-19 UniRef50_A8U602 Flagellar motor switch protein n=5 Tax=Lactobaci... 96 4e-19 UniRef50_B9KJD9 Flagellar switch protein n=5 Tax=Rhodobacter sph... 96 4e-19 UniRef50_D1C1A4 Flagellar motor switch protein FliN n=1 Tax=Spha... 95 6e-19 UniRef50_Q4JMS2 Predicted flagellar motor switch protein n=3 Tax... 95 7e-19 UniRef50_A6M1D2 CheC, inhibitor of MCP methylation n=24 Tax=Clos... 94 1e-18 UniRef50_A9KNE6 CheC, inhibitor of MCP methylation / FliN fusion... 94 1e-18 UniRef50_Q1NP93 Surface presentation of antigens (SPOA) protein ... 94 1e-18 UniRef50_C4G689 Putative uncharacterized protein n=1 Tax=Abiotro... 93 2e-18 UniRef50_Q6AJS8 Probable flagellar motor switch protein (FliN) n... 92 4e-18 UniRef50_B9L5A1 Flagellar motor switch phosphatase FliY (CheY-Pp... 92 4e-18 UniRef50_Q3ADB7 Flagellar motor switch protein n=1 Tax=Carboxydo... 92 5e-18 UniRef50_C4Z5H2 Flagellar motor switch protein FliN/FliY n=3 Tax... 91 8e-18 UniRef50_Q7ULU7 Flagellar motor switch protein fliN n=1 Tax=Rhod... 91 1e-17 UniRef50_UPI0001C312B0 flagellar motor switch protein FliN n=1 T... 91 1e-17 UniRef50_Q1Q6T3 Strong similar to flagellar motor switch protein... 91 1e-17 UniRef50_Q2RKD7 Flagellar motor switch FliN n=1 Tax=Moorella the... 91 2e-17 UniRef50_B4U6V5 Flagellar motor switch protein FliN n=1 Tax=Hydr... 90 2e-17 UniRef50_Q44903 Flagellar motor switch protein fliN n=21 Tax=Spi... 90 3e-17 UniRef50_C0QPC5 Flagellar motor switch protein FliN n=2 Tax=Aqui... 89 5e-17 UniRef50_C7R0I7 Flagellar motor switch protein FliN n=1 Tax=Jone... 89 6e-17 UniRef50_A1QZ73 Flagellar motor switch protein FliN n=7 Tax=Spir... 88 7e-17 UniRef50_C0C1N9 Putative uncharacterized protein n=1 Tax=Clostri... 88 7e-17 UniRef50_A0LDK9 Flagellar motor switch protein FliN n=1 Tax=Magn... 87 1e-16 UniRef50_B0MPD4 Putative uncharacterized protein n=1 Tax=Eubacte... 87 1e-16 UniRef50_Q67K24 Flagellar motor switch protein n=1 Tax=Symbiobac... 87 2e-16 UniRef50_A0LT68 Flagellar motor switch protein FliN n=1 Tax=Acid... 86 3e-16 UniRef50_C6WJP8 Flagellar motor switch protein FliN n=1 Tax=Acti... 86 4e-16 UniRef50_C8WWF9 CheC, inhibitor of MCP methylation / FliN fusion... 86 5e-16 UniRef50_C1ZEF0 Flagellar motor switch protein FliN n=1 Tax=Plan... 85 6e-16 UniRef50_D0MGA9 Flagellar motor switch protein FliN n=1 Tax=Rhod... 85 7e-16 UniRef50_P57183 Flagellar motor switch protein fliN n=3 Tax=Buch... 84 1e-15 UniRef50_A8RWD0 Putative uncharacterized protein n=3 Tax=Clostri... 84 1e-15 UniRef50_C2KZ02 Possible flagellar motor switch protein FliY n=1... 84 1e-15 UniRef50_C0GJF1 Flagellar motor switch protein FliN n=1 Tax=Deth... 84 1e-15 UniRef50_D2S982 Flagellar motor switch protein FliN n=1 Tax=Geod... 84 2e-15 UniRef50_Q2RKB6 CheC, inhibitor of MCP methylation n=1 Tax=Moore... 83 3e-15 UniRef50_A6CER1 Flagellar motor switch protein fliN n=1 Tax=Plan... 83 3e-15 UniRef50_A1SEN5 Flagellar motor switch protein FliN n=1 Tax=Noca... 83 3e-15 UniRef50_D0YPX2 Flagellar motor switch protein FliN n=2 Tax=Mobi... 83 3e-15 UniRef50_A6Q2L3 Flagellar motor switch protein FliN n=1 Tax=Nitr... 82 4e-15 UniRef50_C7M222 Flagellar motor switch protein FliN n=1 Tax=Acid... 82 5e-15 UniRef50_D2R538 Flagellar motor switch protein FliN n=2 Tax=Plan... 82 5e-15 UniRef50_B8HEJ4 Flagellar motor switch protein FliN n=1 Tax=Arth... 81 8e-15 UniRef50_A4SI07 Lateral flagellar motor switch protein, lfiN n=2... 81 8e-15 UniRef50_B0P9X9 Putative uncharacterized protein n=1 Tax=Anaerot... 81 1e-14 UniRef50_C6NYG7 Flagellar motor switch protein FliN n=1 Tax=Acid... 81 1e-14 UniRef50_Q04RL4 Endoflagellar motor switch protein n=6 Tax=Lepto... 80 2e-14 UniRef50_A5V6A7 Flagellar motor switch protein FliN n=4 Tax=Sphi... 80 2e-14 UniRef50_B6BN04 Flagellar motor switch FliN n=1 Tax=Campylobacte... 80 3e-14 UniRef50_C1A552 Flagellar motor switch protein FliN n=1 Tax=Gemm... 79 3e-14 UniRef50_A4Y0Q2 Flagellar motor switch protein FliN n=1 Tax=Pseu... 79 4e-14 UniRef50_C2BUL2 Flagellar motor switch protein FliN n=1 Tax=Mobi... 79 6e-14 UniRef50_Q2RZE3 Possible flagellar motor switch FliN n=1 Tax=Sal... 79 6e-14 UniRef50_Q30SP4 Flagellar motor switch FliN n=1 Tax=Sulfurimonas... 78 7e-14 UniRef50_Q058C3 Flagellar motor switch protein, C-ring protein n... 78 7e-14 UniRef50_D0I457 Flagellar motor switch protein FliN n=2 Tax=Vibr... 78 1e-13 UniRef50_Q0G104 Flagellar motor switch FliN protein:Surface pres... 78 1e-13 UniRef50_C1SNF8 Flagellar motor switch protein FliN n=1 Tax=Deni... 77 2e-13 UniRef50_D1BCL8 Flagellar motor switch protein FliN n=1 Tax=Sang... 77 2e-13 UniRef50_A8UW94 Flagellar motor switch FliN n=1 Tax=Hydrogenivir... 77 2e-13 UniRef50_A1RF65 Flagellar motor switch protein FliN n=8 Tax=Shew... 76 3e-13 UniRef50_A6F9R7 Flagellar motor switch protein n=1 Tax=Moritella... 75 5e-13 UniRef50_B6QZA8 Flagellar motor switch protein n=1 Tax=Pseudovib... 75 6e-13 UniRef50_A5P6I8 Flagellar motor switch protein n=1 Tax=Erythroba... 74 1e-12 UniRef50_Q01PP4 Flagellar motor switch protein FliN n=1 Tax=Cand... 74 1e-12 UniRef50_Q2WA21 Flagellar motor switch/type III secretory pathwa... 74 1e-12 UniRef50_B2USQ1 Flagellar motor switch protein FliY n=14 Tax=Hel... 74 1e-12 UniRef50_B1I5E1 Surface presentation of antigens (SPOA) protein ... 74 2e-12 UniRef50_Q17WT1 Flagellar motor switch protein n=8 Tax=Campyloba... 74 2e-12 UniRef50_A4THZ3 Flagellar switch protein n=26 Tax=Enterobacteria... 74 2e-12 UniRef50_A7K1M2 Flagellar motor switch protein FliN n=17 Tax=Vib... 73 2e-12 UniRef50_C0GJF0 CheC, inhibitor of MCP methylation / FliN fusion... 73 3e-12 UniRef50_Q0EZ61 Flagellar protein n=1 Tax=Mariprofundus ferrooxy... 73 3e-12 UniRef50_A7GZX6 Iron chelatin ABC transporter, substrate binding... 73 3e-12 UniRef50_Q1GNY9 Flagellar motor switch FliN n=2 Tax=Sphingomonad... 72 4e-12 UniRef50_B1ZL53 Flagellar motor switch protein FliN n=6 Tax=Rhiz... 72 5e-12 UniRef50_Q03593 Flagellar motor switch protein fliN n=21 Tax=Alp... 72 5e-12 UniRef50_Q11LL6 Flagellar motor switch protein FliN n=3 Tax=Phyl... 72 5e-12 UniRef50_A6DBQ2 Flagellar motor switch protein n=1 Tax=Caminibac... 72 7e-12 UniRef50_B9Z4S4 Flagellar motor switch protein FliN n=1 Tax=Luti... 72 7e-12 UniRef50_B1ZR34 Flagellar motor switch protein FliN n=3 Tax=Verr... 71 8e-12 UniRef50_B8EL08 Flagellar motor switch protein FliN n=2 Tax=Beij... 71 9e-12 UniRef50_B1LV08 Flagellar motor switch protein FliN n=1 Tax=Meth... 71 1e-11 UniRef50_A1UTV7 Flagellar motor switch protein fliY n=35 Tax=Rhi... 71 1e-11 UniRef50_C3XES1 Flagellar motor switch protein FliY n=1 Tax=Heli... 71 1e-11 UniRef50_A8AKJ4 Putative uncharacterized protein n=1 Tax=Citroba... 71 1e-11 UniRef50_A1T0L0 Surface presentation of antigens (SPOA) protein ... 71 1e-11 UniRef50_B6R821 Flagellar motor switch protein FliN n=2 Tax=Rhod... 70 2e-11 UniRef50_O54245 Flagellar motor switch protein fliN n=15 Tax=Rhi... 70 2e-11 UniRef50_B9JRN7 Flagellar motor switch protein FliN n=2 Tax=Rhiz... 70 2e-11 UniRef50_B9L5V0 Flagellar protein FliY n=1 Tax=Nautilia profundi... 70 2e-11 UniRef50_Q18D12 Putative flagellar motor switch protein n=3 Tax=... 70 2e-11 UniRef50_Q57259 Flagellar motor switch protein fliN n=2 Tax=Rhiz... 70 2e-11 UniRef50_B6IW97 Flagellar motor switch protein FliN n=1 Tax=Rhod... 70 2e-11 UniRef50_C5JB71 Flagellar motor switch/type III secretory pathwa... 69 3e-11 UniRef50_C9PEF6 Flagellar motor switch protein FliN n=1 Tax=Vibr... 69 3e-11 UniRef50_A9HHD1 Flagellar motor switch protein FliN n=2 Tax=Rhod... 69 4e-11 UniRef50_A5FYJ9 Flagellar motor switch protein FliN n=17 Tax=Alp... 69 4e-11 UniRef50_A5D0I4 Flagellar motor switch/type III secretory pathwa... 69 5e-11 UniRef50_D1B0L6 Flagellar motor switch protein FliN n=1 Tax=Sulf... 69 6e-11 UniRef50_Q67MU5 Putative uncharacterized protein n=1 Tax=Symbiob... 68 7e-11 UniRef50_C8W1G7 Surface presentation of antigens (SPOA) protein ... 68 9e-11 UniRef50_A8RWA3 Putative uncharacterized protein n=3 Tax=Clostri... 68 1e-10 UniRef50_Q07SI0 Flagellar motor switch protein FliN n=7 Tax=Alph... 67 1e-10 UniRef50_C6XFK8 Putative flagellar motor switch protein n=1 Tax=... 66 4e-10 UniRef50_C0GJH0 Surface presentation of antigens (SPOA) protein ... 66 4e-10 UniRef50_A5KY22 Flagellar motor switch protein n=2 Tax=Vibrional... 66 4e-10 UniRef50_A3NFV2 Flagellar motor switch/type III secretory pathwa... 65 5e-10 UniRef50_Q5DY32 Lateral flagellar export/assembly protein (FliN-... 65 5e-10 UniRef50_A8EW52 Flagellar motor switch protein FliY n=1 Tax=Arco... 65 6e-10 UniRef50_Q8KA38 Flagellar motor switch protein fliN n=1 Tax=Buch... 65 7e-10 UniRef50_A3SFT8 Surface presentation of antigens (SPOA) protein ... 64 1e-09 UniRef50_B6IQ95 Flagellar motor switch protein FliN n=1 Tax=Rhod... 64 2e-09 UniRef50_Q2CGH8 Flagellar motor switch protein FliN n=3 Tax=Rhod... 64 2e-09 UniRef50_Q0C2D2 Flagellar motor switch protein FliN n=1 Tax=Hyph... 63 3e-09 UniRef50_C9R9Y4 Surface presentation of antigens (SPOA) protein ... 63 3e-09 UniRef50_A3WGR5 Flagellar motor switch protein n=1 Tax=Erythroba... 62 7e-09 UniRef50_A6Q2N5 Flagellar motor switch protein FliN/FliY n=1 Tax... 61 8e-09 UniRef50_B1K3A4 Flagellar motor switch protein FliN n=1 Tax=Burk... 61 9e-09 UniRef50_Q01PQ3 Surface presentation of antigens (SPOA) protein ... 61 1e-08 UniRef50_A7H064 Flagellar motor switch protein FliN n=8 Tax=Epsi... 61 1e-08 UniRef50_A4J755 Surface presentation of antigens (SPOA) protein ... 60 1e-08 UniRef50_A3ZT50 Probable flagellar motor switch protein fliN n=1... 60 2e-08 UniRef50_D1R7U0 Putative type III secretion system protein n=1 T... 60 2e-08 UniRef50_C7DF35 Flagellar motor switch protein FliN n=1 Tax=Thal... 59 3e-08 UniRef50_C1SLE0 Flagellar motor switch/type III secretory pathwa... 59 5e-08 UniRef50_C1F999 Putative flagellar motor switch protein FliN n=1... 59 5e-08 UniRef50_D1AZW0 Surface presentation of antigens (SPOA) protein ... 59 6e-08 UniRef50_Q30RD7 Surface presentation of antigens (SPOA) protein ... 58 1e-07 UniRef50_B1TBB1 Surface presentation of antigens (SPOA) protein ... 58 1e-07 UniRef50_D2LD12 Surface presentation of antigens (SPOA) protein ... 57 2e-07 UniRef50_O67495 Flagellar motor switch protein fliN n=1 Tax=Aqui... 57 3e-07 UniRef50_Q2SEZ2 Flagellar motor switch protein n=1 Tax=Hahella c... 56 3e-07 UniRef50_Q1D9K8 Type III secretion system apparatus protein YscQ... 56 3e-07 UniRef50_Q3ADD4 Flagellar motor switch protein FliN n=1 Tax=Carb... 56 3e-07 UniRef50_Q6MBC5 Putative flagellar motor switch protein (= type ... 56 4e-07 UniRef50_C3KNB2 Type III secretion system translocation protein,... 55 5e-07 UniRef50_Q0C5L8 Putative flagellar motor switch protein FliN n=1... 55 8e-07 UniRef50_Q0ANV1 Surface presentation of antigens (SPOA) protein ... 55 9e-07 UniRef50_UPI0001AF390C type III secretion component, putative n=... 54 1e-06 UniRef50_Q2RPI0 Surface presentation of antigens (SPOA) protein ... 54 1e-06 UniRef50_Q1CTU2 Flagellar switch protein n=20 Tax=Helicobacterac... 54 1e-06 UniRef50_A9DR59 Flagellar motor switch protein n=1 Tax=Oceanibul... 54 1e-06 UniRef50_C0QPA3 Flagellar motor switch phosphatase FliY n=1 Tax=... 54 2e-06 UniRef50_B1LY10 Surface presentation of antigens (SPOA) protein ... 53 3e-06 UniRef50_Q1IR63 Flagellar motor switch FliN n=1 Tax=Candidatus K... 53 3e-06 UniRef50_C6N6Z9 Putative surface presentation of antigens (SPOA)... 52 4e-06 UniRef50_A8EW59 Flagellar motor switch protein FliN n=1 Tax=Arco... 51 9e-06 UniRef50_UPI0001C312B8 CheC, inhibitor of MCP methylation n=1 Ta... 51 1e-05 UniRef50_C1ZEH8 Flagellar motor switch/type III secretory pathwa... 50 2e-05 UniRef50_B0K1R9 Flagellar motor switch protein FliM n=14 Tax=Clo... 50 2e-05 UniRef50_A0NWB8 Putative uncharacterized protein n=3 Tax=Rhodoba... 49 5e-05 UniRef50_C5CYF0 Surface presentation of antigens (SPOA) protein ... 49 5e-05 UniRef50_D2R2R8 Surface presentation of antigens (SPOA) protein ... 49 5e-05 UniRef50_A4U4R5 Surface presentation of antigens (SPOA) protein ... 49 5e-05 UniRef50_Q7UIS4 Probable flagellar motor switch protein fliN [Fr... 49 5e-05 UniRef50_C3XFR2 Flagellar motor switch protein FliN n=1 Tax=Heli... 49 6e-05 UniRef50_B6IT07 Flagellar motor switch protein FliN n=2 Tax=Rhod... 49 6e-05 UniRef50_Q48IQ1 Type III secretion component, putative n=1 Tax=P... 49 7e-05 UniRef50_A6CBY5 Probable flagellar motor switch protein fliN n=1... 48 9e-05 UniRef50_B8DI82 Flagellar motor switch protein n=20 Tax=Listeria... 48 1e-04 UniRef50_D2TZ40 Type III secretion apparatus protein YscQ,HrcQ,S... 48 1e-04 UniRef50_B4R925 FliN family protein n=8 Tax=Alphaproteobacteria ... 47 1e-04 UniRef50_A8LMS4 Flagellar motor switch protein FliN n=5 Tax=Rhod... 47 1e-04 UniRef50_UPI00016C4201 hypothetical protein GobsU_09164 n=1 Tax=... 47 1e-04 UniRef50_Q1IR54 Surface presentation of antigens (SPOA) protein ... 47 2e-04 UniRef50_Q18CW8 Flagellar motor switch protein n=5 Tax=Clostridi... 47 2e-04 UniRef50_A0RC99 Flagellar motor switch protein N n=71 Tax=Bacill... 47 2e-04 UniRef50_A7K019 Type III secretion inner membrane protein YscQ n... 46 3e-04 UniRef50_B8CYQ6 Flagellar motor switch protein FliM n=1 Tax=Halo... 46 3e-04 UniRef50_A7HWV0 Surface presentation of antigens (SPOA) protein ... 46 4e-04 UniRef50_Q2SH51 Flagellar motor switch/type III secretory pathwa... 45 5e-04 UniRef50_B1I5G4 CheC, inhibitor of MCP methylation n=1 Tax=Candi... 45 5e-04 UniRef50_B6WRL8 Putative uncharacterized protein n=1 Tax=Desulfo... 45 6e-04 UniRef50_A9APA9 Type III secretion system apparatus protein YscQ... 45 0.001 UniRef50_Q11M61 Surface presentation of antigens (SPOA) protein ... 44 0.001 UniRef50_Q2NR65 Type III secretion apparatus SpaO n=2 Tax=Sodali... 44 0.001 UniRef50_A7GNF7 CheC, inhibitor of MCP methylation n=70 Tax=Baci... 44 0.001 UniRef50_A4J3G9 CheC, inhibitor of MCP methylation n=2 Tax=Desul... 44 0.001 UniRef50_C4PNI3 Type III secretion component, basal body n=13 Ta... 44 0.002 UniRef50_P74860 Secretion system apparatus protein ssaQ n=37 Tax... 43 0.003 UniRef50_B2A358 Flagellar motor switch protein FliM n=1 Tax=Natr... 43 0.003 UniRef50_A3VS57 Putative uncharacterized protein n=1 Tax=Parvula... 43 0.003 UniRef50_UPI0001744A0D type III secretion system protein n=1 Tax... 43 0.003 UniRef50_B1FB78 Type III secretion system apparatus protein YscQ... 43 0.003 UniRef50_B2V6Q2 Surface presentation of antigens (SPOA) protein ... 42 0.005 UniRef50_Q3SBB5 EpaO n=13 Tax=Escherichia RepID=Q3SBB5_ECOLX 42 0.006 UniRef50_A0AGF3 Complete genome n=15 Tax=Listeria RepID=A0AGF3_L... 42 0.007 UniRef50_Q67K08 Flagellar motor switch protein n=1 Tax=Symbiobac... 42 0.008 UniRef50_D0FW27 Hrp/hrc Type III secretion system-Hrp/hrc secret... 42 0.008 UniRef50_C1DW32 Flagellar motor switch protein FliN/FliY n=1 Tax... 41 0.011 UniRef50_Q02KI5 Translocation protein in type III secretion n=5 ... 41 0.014 UniRef50_B3Q297 Type III secretion system translocation protein ... 41 0.014 UniRef50_Q2RZE2 Flagellar motor switch protein FliM n=2 Tax=Rhod... 41 0.015 >UniRef50_P15070 Flagellar motor switch protein fliN n=15 Tax=Proteobacteria RepID=FLIN_ECOLI Length = 137 Score = 275 bits (702), Expect = 4e-73, Method: Compositional matrix adjust. Identities = 137/137 (100%), Positives = 137/137 (100%) Query: 1 MSDMNNPADDNNGAMDDLWAEALSEQKSTSSKSAAETVFQQFGGGDVSGTLQDIDLIMDI 60 MSDMNNPADDNNGAMDDLWAEALSEQKSTSSKSAAETVFQQFGGGDVSGTLQDIDLIMDI Sbjct: 1 MSDMNNPADDNNGAMDDLWAEALSEQKSTSSKSAAETVFQQFGGGDVSGTLQDIDLIMDI 60 Query: 61 PVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQGEVVVVADKYGV 120 PVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQGEVVVVADKYGV Sbjct: 61 PVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQGEVVVVADKYGV 120 Query: 121 RITDIITPSERMRRLSR 137 RITDIITPSERMRRLSR Sbjct: 121 RITDIITPSERMRRLSR 137 >UniRef50_P26419 Flagellar motor switch protein fliN n=125 Tax=Enterobacteriaceae RepID=FLIN_SALTY Length = 137 Score = 253 bits (647), Expect = 1e-66, Method: Compositional matrix adjust. Identities = 123/137 (89%), Positives = 133/137 (97%) Query: 1 MSDMNNPADDNNGAMDDLWAEALSEQKSTSSKSAAETVFQQFGGGDVSGTLQDIDLIMDI 60 MSDMNNP+D+N GA+DDLWA+AL+EQK+T++KSAA+ VFQQ GGGDVSG +QDIDLIMDI Sbjct: 1 MSDMNNPSDENTGALDDLWADALNEQKATTTKSAADAVFQQLGGGDVSGAMQDIDLIMDI 60 Query: 61 PVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQGEVVVVADKYGV 120 PVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQGEVVVVADKYGV Sbjct: 61 PVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQGEVVVVADKYGV 120 Query: 121 RITDIITPSERMRRLSR 137 RITDIITPSERMRRLSR Sbjct: 121 RITDIITPSERMRRLSR 137 >UniRef50_P35539 Flagellar motor switch protein fliN (Fragment) n=77 Tax=Proteobacteria RepID=FLIN_PECCC Length = 106 Score = 177 bits (449), Expect = 1e-43, Method: Compositional matrix adjust. Identities = 89/106 (83%), Positives = 95/106 (89%) Query: 32 KSAAETVFQQFGGGDVSGTLQDIDLIMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDG 91 + E +F+ G D G LQDIDLI+DIPVKLTVELGRT+MTIKELLRLTQGSVVALDG Sbjct: 1 RPTTEGIFKSLDGHDPLGALQDIDLILDIPVKLTVELGRTKMTIKELLRLTQGSVVALDG 60 Query: 92 LAGEPLDILINGYLIAQGEVVVVADKYGVRITDIITPSERMRRLSR 137 LAGEPLDILINGYLIAQGEVVVV+DKYGVRITDIITPSERMRRLSR Sbjct: 61 LAGEPLDILINGYLIAQGEVVVVSDKYGVRITDIITPSERMRRLSR 106 >UniRef50_Q47I10 Type III secretion system outer membrane O protein n=57 Tax=Proteobacteria RepID=Q47I10_DECAR Length = 147 Score = 150 bits (378), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 74/136 (54%), Positives = 103/136 (75%), Gaps = 5/136 (3%) Query: 7 PADDNNGAMDDLWAEALSEQKSTSSKSAAET----VFQQFGG-GDVSGTLQDIDLIMDIP 61 P +D+ +D WA A+SEQ + + +A +F FGG +G + ++D+I+DIP Sbjct: 12 PVEDDGQISEDDWAAAMSEQAISDAPAAMAAQPADIFPSFGGNAGNAGMMNELDMILDIP 71 Query: 62 VKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQGEVVVVADKYGVR 121 V++TVELGRT++TIK LL+L GSVV LD +AGEP+D+++NG LIAQGEVVVV DK+G+R Sbjct: 72 VQITVELGRTKITIKNLLQLAHGSVVELDAMAGEPMDVMVNGTLIAQGEVVVVNDKFGIR 131 Query: 122 ITDIITPSERMRRLSR 137 +TDIITPSERMR+L+R Sbjct: 132 LTDIITPSERMRKLNR 147 >UniRef50_Q0AEF2 Flagellar motor switch protein FliN n=12 Tax=Proteobacteria RepID=Q0AEF2_NITEC Length = 157 Score = 144 bits (362), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 68/106 (64%), Positives = 90/106 (84%), Gaps = 1/106 (0%) Query: 33 SAAETVFQQFGGGDV-SGTLQDIDLIMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDG 91 + +VF+QF +V + T DID+I+DIPV+LTVELGRTR+ IK LL+L QGSV+ LDG Sbjct: 52 TKPSSVFEQFSRNNVLNDTRNDIDMILDIPVQLTVELGRTRIAIKNLLQLAQGSVIELDG 111 Query: 92 LAGEPLDILINGYLIAQGEVVVVADKYGVRITDIITPSERMRRLSR 137 +AGEP+D+L+NG LIAQGEVVVV +K+G+R+TDIITPSER+R+L+R Sbjct: 112 MAGEPMDVLVNGCLIAQGEVVVVNEKFGIRLTDIITPSERIRKLNR 157 >UniRef50_Q3SIG7 Flagellar motor switch/type III secretory pathway protein FliN n=17 Tax=Proteobacteria RepID=Q3SIG7_THIDA Length = 132 Score = 140 bits (353), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 68/101 (67%), Positives = 85/101 (84%), Gaps = 1/101 (0%) Query: 38 VFQQFGGGDVS-GTLQDIDLIMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEP 96 +F++F G S G DID I+DIPV LTVELGRT++ IK LL+L QGSVV LDGLAGEP Sbjct: 32 IFKEFSGSASSTGLANDIDFILDIPVLLTVELGRTKIAIKNLLQLAQGSVVELDGLAGEP 91 Query: 97 LDILINGYLIAQGEVVVVADKYGVRITDIITPSERMRRLSR 137 +D+L+NG LIAQGEVVVV DK+GVR+TDIITP+ER+R+L++ Sbjct: 92 MDVLVNGCLIAQGEVVVVNDKFGVRLTDIITPAERIRKLNK 132 >UniRef50_A1WGY8 Flagellar motor switch protein FliN n=19 Tax=Proteobacteria RepID=A1WGY8_VEREI Length = 163 Score = 140 bits (353), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 80/155 (51%), Positives = 102/155 (65%), Gaps = 31/155 (20%) Query: 7 PADDNNGAMDDL--WAEALSEQKSTSSKSAAETVFQQFGGGDVSG--------------- 49 PAD N A D WAEAL EQK + A QQ GG +SG Sbjct: 15 PAD--NAADDPFNGWAEALKEQKRSDEPPAE---GQQ--GGPLSGEPVRPPLAGAASGAS 67 Query: 50 -------TLQDIDLIMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILIN 102 + DI+ ++DIPV+L+VELGRT++ IK +L+L QGSVV LD LAGEP+D+L+N Sbjct: 68 AVNGGEQVINDINRVLDIPVQLSVELGRTKVPIKYILQLAQGSVVELDALAGEPMDVLVN 127 Query: 103 GYLIAQGEVVVVADKYGVRITDIITPSERMRRLSR 137 GYLIAQGEVVVV DK+G+R+TD++TPSER+RR+SR Sbjct: 128 GYLIAQGEVVVVNDKFGIRLTDVVTPSERLRRVSR 162 >UniRef50_Q2NX05 Flagellar motor switch protein FliN n=5 Tax=Enterobacteriaceae RepID=Q2NX05_SODGM Length = 134 Score = 138 bits (348), Expect = 4e-32, Method: Compositional matrix adjust. Identities = 65/86 (75%), Positives = 79/86 (91%) Query: 52 QDIDLIMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQGEV 111 +D+ LI+DIPVK+TVELGRTRMTI+ELL L+Q +VV L+G AGEPLDILINGYLIA+GEV Sbjct: 49 EDLSLILDIPVKMTVELGRTRMTIRELLHLSQDAVVPLEGQAGEPLDILINGYLIARGEV 108 Query: 112 VVVADKYGVRITDIITPSERMRRLSR 137 VV+ ++YGVRI DI+TP+ERMRRLSR Sbjct: 109 VVMGEQYGVRIADIVTPAERMRRLSR 134 >UniRef50_Q31FQ0 Flagellar motor switch protein FliN n=5 Tax=Gammaproteobacteria RepID=Q31FQ0_THICR Length = 153 Score = 129 bits (323), Expect = 4e-29, Method: Compositional matrix adjust. Identities = 68/139 (48%), Positives = 98/139 (70%), Gaps = 7/139 (5%) Query: 3 DMNNPADDNNGAMDDLWAEALSEQKS-TSSKSAAETVFQQF-----GGGDVSGTLQDIDL 56 D A+ ++ A DD W ALSEQ + TSS ++ E F G GD S + D+D+ Sbjct: 15 DEQAEAEGSDAAGDDPWGAALSEQAAETSSNNSDEIDAASFDALEKGRGDSSEKV-DLDV 73 Query: 57 IMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQGEVVVVAD 116 ++DIPV L +E+GR +++I+ LL TQGSV+ +D LAGEPLD+L+NG LIA GEVVV+ D Sbjct: 74 LLDIPVTLQLEIGRAKVSIRNLLSYTQGSVIEMDRLAGEPLDLLVNGTLIAHGEVVVIND 133 Query: 117 KYGVRITDIITPSERMRRL 135 K+GVR+TD+++P ER+++L Sbjct: 134 KFGVRLTDVVSPQERIKKL 152 >UniRef50_Q8D3E9 FliN protein n=3 Tax=Enterobacteriaceae RepID=Q8D3E9_WIGBR Length = 135 Score = 127 bits (318), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 65/138 (47%), Positives = 97/138 (70%), Gaps = 4/138 (2%) Query: 1 MSDMNN-PADDNNGAMDDLWAEALSEQKSTSSKSAAETVFQQFGGGDVSGTLQDIDLIMD 59 M+D+ P N +++DL + ++ +S+ E + +S +DI+LI+D Sbjct: 1 MNDIKKEPEKIKNDSVEDLNNDDEIKELKANSEEIKEIDSSKIKNKKLS---EDINLILD 57 Query: 60 IPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQGEVVVVADKYG 119 IP+K+T+ELGRT+MTI++LL L + S+V LDG GEPLDILIN YL+A+GEVVV+ ++YG Sbjct: 58 IPIKMTIELGRTKMTIRDLLLLKRDSIVTLDGEIGEPLDILINDYLVARGEVVVMKERYG 117 Query: 120 VRITDIITPSERMRRLSR 137 ++I DIITP ER+RRL+R Sbjct: 118 IKILDIITPEERIRRLNR 135 >UniRef50_B5YIZ3 Flagellar motor switch protein FliN n=1 Tax=Thermodesulfovibrio yellowstonii DSM 11347 RepID=B5YIZ3_THEYD Length = 139 Score = 120 bits (300), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 58/118 (49%), Positives = 88/118 (74%), Gaps = 1/118 (0%) Query: 19 WAEALSEQKSTSSKSAAETV-FQQFGGGDVSGTLQDIDLIMDIPVKLTVELGRTRMTIKE 77 A+AL +K+ +K ++ +F + +DID I+DIP++L V +GRTR+ ++E Sbjct: 21 MAKALEMEKAMKAKEEVQSPHIDEFTVTEEKPKTRDIDFILDIPLELVVVIGRTRILVQE 80 Query: 78 LLRLTQGSVVALDGLAGEPLDILINGYLIAQGEVVVVADKYGVRITDIITPSERMRRL 135 LL+LTQGSVVALD LAGEP+++ +NG L+ +GEVVVV +K+G+RITDII+P ER+++L Sbjct: 81 LLQLTQGSVVALDKLAGEPMEVYVNGKLVGRGEVVVVNEKFGIRITDIISPQERVKQL 138 >UniRef50_Q2LT02 Flagellar motor switch protein n=2 Tax=Deltaproteobacteria RepID=Q2LT02_SYNAS Length = 163 Score = 118 bits (296), Expect = 5e-26, Method: Compositional matrix adjust. Identities = 58/128 (45%), Positives = 85/128 (66%) Query: 8 ADDNNGAMDDLWAEALSEQKSTSSKSAAETVFQQFGGGDVSGTLQDIDLIMDIPVKLTVE 67 +DD+N +D+ E Q T + F++ G D+D I+DIP+ L+VE Sbjct: 35 SDDDNFGWEDVKEELAQSQVKTPKVEVSPADFKEIPAGPKMDPQLDLDFILDIPLTLSVE 94 Query: 68 LGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQGEVVVVADKYGVRITDIIT 127 LGR RM I ELL+L QGS++ L LAGEP+D+ +N LIA+GEVVVV +K+G+R+TDI++ Sbjct: 95 LGRCRMLISELLQLGQGSIIELVKLAGEPMDVYVNQRLIARGEVVVVNEKFGIRLTDIVS 154 Query: 128 PSERMRRL 135 P+ER+ +L Sbjct: 155 PAERVNKL 162 >UniRef50_Q0AA08 Flagellar motor switch protein FliN n=49 Tax=cellular organisms RepID=Q0AA08_ALHEH Length = 226 Score = 114 bits (286), Expect = 7e-25, Method: Compositional matrix adjust. Identities = 49/83 (59%), Positives = 74/83 (89%) Query: 53 DIDLIMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQGEVV 112 ++D+IMDIPV L++E+GRT+++I+ LL+L QGSVV LD LAGEPLD+++NG LIA GEVV Sbjct: 143 NLDVIMDIPVTLSMEIGRTQISIRHLLQLNQGSVVELDRLAGEPLDVMVNGTLIAHGEVV 202 Query: 113 VVADKYGVRITDIITPSERMRRL 135 VV +++G+R+TD+I+ +ER+++L Sbjct: 203 VVNERFGIRLTDVISAAERVKKL 225 >UniRef50_Q51466 Flagellar motor switch protein fliN n=23 Tax=Proteobacteria RepID=FLIN_PSEAE Length = 157 Score = 114 bits (286), Expect = 7e-25, Method: Compositional matrix adjust. Identities = 53/111 (47%), Positives = 82/111 (73%), Gaps = 5/111 (4%) Query: 30 SSKSAAETVFQQFGGGDVSGTLQ-----DIDLIMDIPVKLTVELGRTRMTIKELLRLTQG 84 + S ++FG + T+ ++D+I+DIPV +++E+G T ++I+ LL+L QG Sbjct: 46 AEPSTPRAPMEEFGASPKAPTISGLEGPNLDVILDIPVTISMEVGHTDISIRNLLQLNQG 105 Query: 85 SVVALDGLAGEPLDILINGYLIAQGEVVVVADKYGVRITDIITPSERMRRL 135 SV+ LD LAGEPLD+L+NG LIA GEVVVV +K+G+R+TD+I+PSER+++L Sbjct: 106 SVIELDRLAGEPLDVLVNGTLIAHGEVVVVNEKFGIRLTDVISPSERIKKL 156 >UniRef50_D1B6B2 Flagellar motor switch protein FliN n=1 Tax=Thermanaerovibrio acidaminovorans DSM 6589 RepID=D1B6B2_THEAS Length = 375 Score = 113 bits (282), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 53/97 (54%), Positives = 77/97 (79%) Query: 39 FQQFGGGDVSGTLQDIDLIMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLD 98 F GG +V+ + IDLI DIPV++TVELGRTR TI E+L ++ GSVV L+ +AGEP+D Sbjct: 277 FAPLGGQEVAISASAIDLISDIPVRITVELGRTRKTIGEILNMSPGSVVELNRMAGEPVD 336 Query: 99 ILINGYLIAQGEVVVVADKYGVRITDIITPSERMRRL 135 +L+NG LIA+GEVVV+ + +GVR+T+I++ +ER+R + Sbjct: 337 VLVNGKLIARGEVVVIDENFGVRVTEIVSRAERIRSM 373 >UniRef50_Q6MI47 Flagellar motor switch protein FliN n=2 Tax=Deltaproteobacteria RepID=Q6MI47_BDEBA Length = 122 Score = 112 bits (280), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 57/120 (47%), Positives = 85/120 (70%), Gaps = 9/120 (7%) Query: 16 DDLWAEALSEQKSTSSKSAAETVFQQFGGGDVSGTLQDIDLIMDIPVKLTVELGRTRMTI 75 D L AEA +S+ K+++E + +++ LI+DIP+K++VELGRT+M + Sbjct: 11 DQLVAEAAGMAESSGRKASSEMPTHKD---------RNLSLILDIPLKVSVELGRTKMPV 61 Query: 76 KELLRLTQGSVVALDGLAGEPLDILINGYLIAQGEVVVVADKYGVRITDIITPSERMRRL 135 ELL LTQGSV+ L LAGEP+++ +N LIA+GE VVV +K+GVR+TDII+P+ER+ +L Sbjct: 62 SELLNLTQGSVIELSKLAGEPMEVYVNDKLIARGEAVVVNEKFGVRLTDIISPAERVEQL 121 >UniRef50_C7ILI0 CheC, inhibitor of MCP methylation / FliN fusion protein n=3 Tax=Clostridiales RepID=C7ILI0_9CLOT Length = 400 Score = 111 bits (278), Expect = 6e-24, Method: Compositional matrix adjust. Identities = 56/107 (52%), Positives = 76/107 (71%) Query: 26 QKSTSSKSAAETVFQQFGGGDVSGTLQDIDLIMDIPVKLTVELGRTRMTIKELLRLTQGS 85 Q+ S S FQ F G + ++I LIMD+P+++TVELGRT+ IK++L GS Sbjct: 294 QRQRSPVSVQPVQFQAFDDGLSATEKKNISLIMDLPLQVTVELGRTQKLIKDILEFGSGS 353 Query: 86 VVALDGLAGEPLDILINGYLIAQGEVVVVADKYGVRITDIITPSERM 132 V+ LD LAGEP+DIL+NG IA+GEVVV+ + +GVRITDII PS+R+ Sbjct: 354 VIELDKLAGEPVDILVNGKAIAKGEVVVIDESFGVRITDIIHPSKRL 400 >UniRef50_Q0AYM4 CheC, inhibitor of MCP methylation n=5 Tax=Firmicutes RepID=Q0AYM4_SYNWW Length = 398 Score = 111 bits (277), Expect = 7e-24, Method: Compositional matrix adjust. Identities = 49/84 (58%), Positives = 71/84 (84%) Query: 52 QDIDLIMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQGEV 111 Q++DLIMD+P+ ++VELG+T+ TI E+L L QG+++ LD LAGEP+D+L+NG LIA+GEV Sbjct: 314 QNLDLIMDVPLDVSVELGKTKKTIGEILELNQGAIIQLDKLAGEPVDLLVNGKLIAKGEV 373 Query: 112 VVVADKYGVRITDIITPSERMRRL 135 VV+ + YG+RIT II+P +RM +L Sbjct: 374 VVIDENYGIRITTIISPIDRMNKL 397 >UniRef50_B8CYQ5 CheC, inhibitor of MCP methylation n=1 Tax=Halothermothrix orenii H 168 RepID=B8CYQ5_HALOH Length = 375 Score = 110 bits (276), Expect = 9e-24, Method: Compositional matrix adjust. Identities = 49/97 (50%), Positives = 75/97 (77%) Query: 39 FQQFGGGDVSGTLQDIDLIMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLD 98 F F G+ + Q+++LI D+P+++TV LG+TRMTIK++L L +GS+V L+ LAGEP+D Sbjct: 279 FPSFDNGNTAPLPQNMELIQDVPLEVTVRLGKTRMTIKQILDLGEGSIVELEKLAGEPVD 338 Query: 99 ILINGYLIAQGEVVVVADKYGVRITDIITPSERMRRL 135 +L+NG LIA+GEVVV+ + +G R+ DII+P ER+ + Sbjct: 339 LLVNGKLIAKGEVVVIDENFGFRVKDIISPMERLNNI 375 >UniRef50_D2LSG7 CheC, inhibitor of MCP methylation / FliN fusion protein n=1 Tax=Bacillus cellulosilyticus DSM 2522 RepID=D2LSG7_BACS4 Length = 398 Score = 110 bits (276), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 53/111 (47%), Positives = 83/111 (74%), Gaps = 6/111 (5%) Query: 27 KSTSSKSAAETVFQ--QFGGGDVSGTLQDIDLIMDIPVKLTVELGRTRMTIKELLRLTQG 84 +S + AA + F+ Q G + +++D+++DIP+++TVELGRT+ +IK++L LTQG Sbjct: 292 RSAEVQPAAFSNFETPQLGNNEA----KNLDMLLDIPLEVTVELGRTKRSIKDILELTQG 347 Query: 85 SVVALDGLAGEPLDILINGYLIAQGEVVVVADKYGVRITDIITPSERMRRL 135 S++ LD LAGEP+DIL+N LIA+GEVVV+ + +GVR+TDI++ ER+ L Sbjct: 348 SIIELDKLAGEPVDILVNQRLIAKGEVVVIDENFGVRVTDIVSKRERLNNL 398 >UniRef50_Q3BU42 Flagellar motor switch/type III secretory pathway protein FliN n=9 Tax=Xanthomonas RepID=Q3BU42_XANC5 Length = 112 Score = 110 bits (275), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 48/83 (57%), Positives = 71/83 (85%) Query: 53 DIDLIMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQGEVV 112 ++D+I+D+PV L++E+GR R+ I+ LL+L QGSVV L+ AGEPLD+ +NG LIA GEVV Sbjct: 29 NLDVILDVPVTLSLEVGRARIPIRNLLQLNQGSVVELERGAGEPLDVYVNGTLIAHGEVV 88 Query: 113 VVADKYGVRITDIITPSERMRRL 135 V+ D++G+R+TD+++PSER+RRL Sbjct: 89 VINDRFGIRLTDVVSPSERIRRL 111 >UniRef50_A4J737 CheC, inhibitor of MCP methylation n=1 Tax=Desulfotomaculum reducens MI-1 RepID=A4J737_DESRM Length = 411 Score = 110 bits (275), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 50/86 (58%), Positives = 73/86 (84%) Query: 52 QDIDLIMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQGEV 111 +++DLI+DIP+K++V LGRT+ IK++L++ GSVV LD LA EP+DIL+NG L+A GEV Sbjct: 324 RNLDLILDIPLKVSVILGRTKRPIKDVLKIAPGSVVELDSLADEPVDILVNGTLVATGEV 383 Query: 112 VVVADKYGVRITDIITPSERMRRLSR 137 VVV + +G+RIT+II+P ER++RLS+ Sbjct: 384 VVVNENFGIRITNIISPMERVKRLSK 409 >UniRef50_Q30VB8 Surface presentation of antigens (SPOA) protein n=4 Tax=Deltaproteobacteria RepID=Q30VB8_DESDG Length = 175 Score = 108 bits (271), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 49/84 (58%), Positives = 71/84 (84%) Query: 52 QDIDLIMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQGEV 111 +++D I+DIP+ ++ ELGRTR+ I ELL+L QGSVV L+ LAGEPL+I +NG L+A+GE Sbjct: 91 RELDFILDIPLDVSAELGRTRLLINELLQLGQGSVVELNKLAGEPLEIYVNGKLVARGEA 150 Query: 112 VVVADKYGVRITDIITPSERMRRL 135 VV+ +K+GVR+TDII+P ER+++L Sbjct: 151 VVINEKFGVRLTDIISPIERVKQL 174 >UniRef50_A4IMA6 Flagellar motor switch protein n=8 Tax=Firmicutes RepID=A4IMA6_GEOTN Length = 393 Score = 108 bits (270), Expect = 5e-23, Method: Compositional matrix adjust. Identities = 48/112 (42%), Positives = 85/112 (75%), Gaps = 1/112 (0%) Query: 25 EQKSTSSKSAAETVFQQFGGGDVSGT-LQDIDLIMDIPVKLTVELGRTRMTIKELLRLTQ 83 E++S + + F +F ++ T ++++L+ D+P+++TVELGRT+ +++E+L+L+ Sbjct: 281 EEESVAERHIQAADFAEFDDPPLAATEARNLELLFDVPLQVTVELGRTKRSVQEILQLSA 340 Query: 84 GSVVALDGLAGEPLDILINGYLIAQGEVVVVADKYGVRITDIITPSERMRRL 135 GS++ LD LAGEP+DI +N LIA+GEVVV+ + +GVRITDI++ ++R++RL Sbjct: 341 GSIIELDKLAGEPVDIFVNNKLIAKGEVVVIDENFGVRITDIVSQNDRLKRL 392 >UniRef50_C6BUR6 Flagellar motor switch protein FliN n=21 Tax=Proteobacteria RepID=C6BUR6_DESAD Length = 229 Score = 108 bits (270), Expect = 6e-23, Method: Compositional matrix adjust. Identities = 56/132 (42%), Positives = 81/132 (61%), Gaps = 14/132 (10%) Query: 19 WAEALSEQKSTSSKSAAETVFQQFGGGDVS--------------GTLQDIDLIMDIPVKL 64 WA AL+E + E F + D G+ +D+D I+DIP+ + Sbjct: 98 WAAALAEDTGDDIRKEKEQEFLRTQTRDADFKDLTNEAKNPRHDGSRRDLDFILDIPLDV 157 Query: 65 TVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQGEVVVVADKYGVRITD 124 + ELGR +M I ELL+L GSVV L LAGEPL+I +NG L+A+GE VV+ +K+G+R+TD Sbjct: 158 SAELGRAKMLINELLQLGTGSVVELTKLAGEPLEIYVNGKLVARGEAVVINEKFGIRLTD 217 Query: 125 IITPSERMRRLS 136 II+P ER++ L+ Sbjct: 218 IISPIERVKHLA 229 >UniRef50_B8FK37 Flagellar motor switch protein FliN n=3 Tax=Bacteria RepID=B8FK37_DESAA Length = 119 Score = 107 bits (268), Expect = 8e-23, Method: Compositional matrix adjust. Identities = 50/82 (60%), Positives = 68/82 (82%) Query: 54 IDLIMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQGEVVV 113 +D I+DIP+ +TVELGRT M IK+LL+L QG+VV L LAGEP++I +NG L A+GEVVV Sbjct: 37 LDFILDIPLDITVELGRTSMRIKDLLQLGQGAVVELTKLAGEPMEIFVNGKLFARGEVVV 96 Query: 114 VADKYGVRITDIITPSERMRRL 135 V +K+GVR+TDI++P ER++ L Sbjct: 97 VNEKFGVRLTDIVSPQERIKSL 118 >UniRef50_A5IJA7 CheC, inhibitor of MCP methylation n=5 Tax=Thermotogaceae RepID=A5IJA7_THEP1 Length = 346 Score = 107 bits (268), Expect = 9e-23, Method: Compositional matrix adjust. Identities = 47/84 (55%), Positives = 70/84 (83%) Query: 54 IDLIMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQGEVVV 113 ++L++DIP+++TVELGRTRMT+K +L + GS++ LD L GEP+DIL+NG LIA+GEVVV Sbjct: 263 LELLLDIPLRVTVELGRTRMTLKRVLEMIPGSIIELDKLTGEPVDILVNGKLIARGEVVV 322 Query: 114 VADKYGVRITDIITPSERMRRLSR 137 + + +GVRIT+I++P ER+ L+ Sbjct: 323 IDENFGVRITEIVSPKERLELLNE 346 >UniRef50_B2A359 CheC, inhibitor of MCP methylation / FliN fusion protein n=5 Tax=Bacteria RepID=B2A359_NATTJ Length = 422 Score = 107 bits (267), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 47/87 (54%), Positives = 71/87 (81%) Query: 49 GTLQDIDLIMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQ 108 G +I+LIMD+P+++TVELG+T+ I+E+L L GS++ LD +AGEP+DI +NG LIA+ Sbjct: 335 GENSNIELIMDVPLEVTVELGQTKKKIQEILELVPGSIIELDKIAGEPVDIKVNGKLIAK 394 Query: 109 GEVVVVADKYGVRITDIITPSERMRRL 135 GEVVV+ + +G+RIT+II+P ER+ +L Sbjct: 395 GEVVVIDENFGIRITEIISPVERINKL 421 >UniRef50_P24073 Flagellar motor switch phosphatase fliY n=8 Tax=Bacteria RepID=FLIY_BACSU Length = 378 Score = 106 bits (265), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 46/98 (46%), Positives = 75/98 (76%), Gaps = 1/98 (1%) Query: 39 FQQFGGGD-VSGTLQDIDLIMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPL 97 F F + V + ++D+++DIP+ +TVELGRT+ ++KE+L L+ GS++ LD LAGEP+ Sbjct: 280 FSAFDPNEAVQAPIHNLDMLLDIPLSITVELGRTKRSVKEILELSAGSIIELDKLAGEPV 339 Query: 98 DILINGYLIAQGEVVVVADKYGVRITDIITPSERMRRL 135 DIL+N ++A+GEVVV+ + +GVR+TDI++ +ER+ L Sbjct: 340 DILVNQRIVAKGEVVVIEENFGVRVTDILSQAERINNL 377 >UniRef50_C9R9W6 CheC, inhibitor of MCP methylation / FliN fusion protein n=1 Tax=Ammonifex degensii KC4 RepID=C9R9W6_AMMDK Length = 360 Score = 106 bits (265), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 50/84 (59%), Positives = 69/84 (82%) Query: 54 IDLIMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQGEVVV 113 ++LI+DIP+K++V LGRTR IKE+L L GS++ LD LA EP++IL+NG L+A+GEVVV Sbjct: 273 LELILDIPLKVSVVLGRTRRPIKEILGLGPGSILELDALADEPVEILVNGVLVARGEVVV 332 Query: 114 VADKYGVRITDIITPSERMRRLSR 137 V + +GVRIT I+TP ER+R L+R Sbjct: 333 VEENFGVRITSIVTPQERLRYLAR 356 >UniRef50_B1YI92 CheC, inhibitor of MCP methylation / FliN fusion protein n=2 Tax=Exiguobacterium RepID=B1YI92_EXIS2 Length = 376 Score = 105 bits (263), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 52/113 (46%), Positives = 75/113 (66%), Gaps = 1/113 (0%) Query: 21 EALSEQKSTSSKSAAETVFQQFGGGDVSGTLQDIDLIMDIPVKLTVELGRTRMTIKELLR 80 EA EQK + F QF G +I ++ D+P+ +TVELGRTR +++++L Sbjct: 263 EAPPEQKK-EPVGVSPVQFGQFSEVQQEGPPGNIGMLYDVPLNVTVELGRTRRSVRDILE 321 Query: 81 LTQGSVVALDGLAGEPLDILINGYLIAQGEVVVVADKYGVRITDIITPSERMR 133 LTQGS++ LD LAGEP+D+ +N LIA GEVVV+ + +GVRIT+I+ ER+R Sbjct: 322 LTQGSIIELDKLAGEPVDVFVNNTLIATGEVVVIEENFGVRITEIVNTKERLR 374 >UniRef50_C6D2V9 CheC, inhibitor of MCP methylation / FliN fusion protein n=15 Tax=Bacteria RepID=C6D2V9_PAESJ Length = 421 Score = 105 bits (262), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 46/83 (55%), Positives = 72/83 (86%) Query: 53 DIDLIMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQGEVV 112 +++L++DIP+K+TVELGRT+ IK++L L+QGS++ LD LAGEP+DIL+N LIA+GEVV Sbjct: 338 NLNLLLDIPLKVTVELGRTQKQIKDILELSQGSIIELDKLAGEPVDILVNNKLIAKGEVV 397 Query: 113 VVADKYGVRITDIITPSERMRRL 135 V+ + +GVR+TDI++ +R+++L Sbjct: 398 VIDENFGVRVTDIVSQWDRIQKL 420 >UniRef50_B9PA59 Predicted protein n=2 Tax=cellular organisms RepID=B9PA59_POPTR Length = 284 Score = 105 bits (262), Expect = 5e-22, Method: Compositional matrix adjust. Identities = 49/84 (58%), Positives = 69/84 (82%) Query: 52 QDIDLIMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQGEV 111 + ID ++D+P+ ++V +G RM IK+LL+L QGSVV LD LAGEP++ILIN L+A+GEV Sbjct: 201 ESIDFLLDVPLTVSVRVGTARMLIKDLLQLGQGSVVELDKLAGEPMEILINDKLVARGEV 260 Query: 112 VVVADKYGVRITDIITPSERMRRL 135 V+V DKYGVR+TDI++P ER++ L Sbjct: 261 VMVNDKYGVRLTDIVSPIERIKSL 284 >UniRef50_B0THB7 Flagellar motor switch protein flin, putative n=5 Tax=Bacteria RepID=B0THB7_HELMI Length = 375 Score = 105 bits (261), Expect = 5e-22, Method: Compositional matrix adjust. Identities = 49/83 (59%), Positives = 70/83 (84%) Query: 53 DIDLIMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQGEVV 112 ++ LIMD+P+++TVELG++R TI+++L L GSV+ LD LAGEP+DIL+NG LIA+GEVV Sbjct: 292 NLGLIMDVPLQVTVELGKSRKTIRDILDLGPGSVIELDKLAGEPVDILVNGKLIAKGEVV 351 Query: 113 VVADKYGVRITDIITPSERMRRL 135 V+ + +GVRITDI++P ER+ L Sbjct: 352 VIDENFGVRITDIVSPIERIGNL 374 >UniRef50_A3DCN7 CheC, inhibitor of MCP methylation n=2 Tax=Clostridium thermocellum RepID=A3DCN7_CLOTH Length = 406 Score = 104 bits (260), Expect = 7e-22, Method: Compositional matrix adjust. Identities = 51/95 (53%), Positives = 72/95 (75%), Gaps = 1/95 (1%) Query: 39 FQQFG-GGDVSGTLQDIDLIMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPL 97 F+ F G +S ++I LIMD+P+++TVELGRT IK++L GS++ LD LAGEP+ Sbjct: 312 FEAFDDGSKISIDKKNIGLIMDVPLQVTVELGRTNKLIKDILEFGPGSIIELDKLAGEPV 371 Query: 98 DILINGYLIAQGEVVVVADKYGVRITDIITPSERM 132 DIL+NG +IA GEVVV+ + +GVRITDI+ PS+R+ Sbjct: 372 DILVNGKVIAIGEVVVIDESFGVRITDILHPSKRL 406 >UniRef50_B5Y7F0 Flagellar motor switch phosphatase FliY (CheY-Pphosphatase fliY) (Flagellar motor switch protein fliY) n=1 Tax=Coprothermobacter proteolyticus DSM 5265 RepID=B5Y7F0_COPPD Length = 287 Score = 103 bits (258), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 47/89 (52%), Positives = 71/89 (79%) Query: 45 GDVSGTLQDIDLIMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGY 104 GD+ ++++L++D+ V ++VELGR+R++IK+LL L GS++ LD LAGEP+DIL+NG Sbjct: 196 GDIQPLPRNLELLLDVKVNVSVELGRSRVSIKDLLSLGSGSIITLDKLAGEPVDILVNGK 255 Query: 105 LIAQGEVVVVADKYGVRITDIITPSERMR 133 IA+GEVVV+ + +GVRI DII P ER++ Sbjct: 256 PIAKGEVVVIDESFGVRILDIIAPKERLK 284 >UniRef50_A6LMJ7 CheC, inhibitor of MCP methylation n=4 Tax=Thermotogaceae RepID=A6LMJ7_THEM4 Length = 370 Score = 103 bits (256), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 52/117 (44%), Positives = 80/117 (68%), Gaps = 4/117 (3%) Query: 23 LSEQKSTSSKSAAETVFQQF-GGGDVSGT---LQDIDLIMDIPVKLTVELGRTRMTIKEL 78 +SE + S + FQ F GG V T + I ++DIP+ + VELG+T++T+K++ Sbjct: 253 MSENIQKNPVSVSPVQFQSFESGGIVKSTSEIPERIKALLDIPLNVVVELGKTKLTLKQV 312 Query: 79 LRLTQGSVVALDGLAGEPLDILINGYLIAQGEVVVVADKYGVRITDIITPSERMRRL 135 + L+ GS++ LD L GEP+DI++NG LIA+GEVVV+ + +GVRIT+I++P ER L Sbjct: 313 MELSVGSLIELDKLTGEPVDIIVNGKLIARGEVVVIDENFGVRITEIVSPQERFYTL 369 >UniRef50_A8F896 Flagellar motor switch protein FliN n=3 Tax=Thermotoga RepID=A8F896_THELT Length = 343 Score = 103 bits (256), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 44/79 (55%), Positives = 67/79 (84%) Query: 54 IDLIMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQGEVVV 113 ++L++D+P+K+ VELGR +MT+K++L + GS++ LD L GEP+DIL+NG LIA+GEVVV Sbjct: 256 LELLLDVPLKVVVELGRAKMTLKQVLEMNIGSLIELDKLTGEPVDILVNGRLIAKGEVVV 315 Query: 114 VADKYGVRITDIITPSERM 132 V + +GVRIT+I+TP +R+ Sbjct: 316 VDENFGVRITEIVTPKQRI 334 >UniRef50_B8FTQ8 CheC, inhibitor of MCP methylation / FliN fusion protein n=4 Tax=Bacteria RepID=B8FTQ8_DESHD Length = 417 Score = 103 bits (256), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 47/96 (48%), Positives = 72/96 (75%) Query: 39 FQQFGGGDVSGTLQDIDLIMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLD 98 F GD ++++LI+D+P++++VELG+ + TIKE+L L GSV+ LD LAGEP+D Sbjct: 317 FVPLKPGDPLHGQENLELILDVPLQVSVELGKAKKTIKEILELGPGSVIELDRLAGEPVD 376 Query: 99 ILINGYLIAQGEVVVVADKYGVRITDIITPSERMRR 134 +++NG LIA+ EVVV+ + +G+RITDI+ P ERM + Sbjct: 377 MIVNGKLIAKCEVVVINETFGIRITDIVQPGERMTK 412 >UniRef50_C0ZF88 Flagellar motor switch protein FliY n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0ZF88_BREBN Length = 455 Score = 103 bits (256), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 49/98 (50%), Positives = 77/98 (78%), Gaps = 1/98 (1%) Query: 39 FQQFGGGDV-SGTLQDIDLIMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPL 97 F GG + +G +Q+++L+ DIP+++TVELGRT+ I+E+L L+ GS++ LD LAGE + Sbjct: 357 FAPLGGAPMYTGDIQNLNLLHDIPLQVTVELGRTKKLIREILDLSAGSIIQLDKLAGEHV 416 Query: 98 DILINGYLIAQGEVVVVADKYGVRITDIITPSERMRRL 135 DIL+N LIA+GEVVV+ + +GVR+TDII+ +R+++L Sbjct: 417 DILVNNKLIAKGEVVVIDENFGVRVTDIISQIDRVQKL 454 >UniRef50_B0K9T5 CheC, inhibitor of MCP methylation / FliN fusion protein n=5 Tax=Thermoanaerobacterales RepID=B0K9T5_THEP3 Length = 375 Score = 102 bits (255), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 50/101 (49%), Positives = 73/101 (72%), Gaps = 3/101 (2%) Query: 38 VFQQFGGGDVSGTLQD---IDLIMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAG 94 VFQ F S +D +DLI+D+P+ +TVELG+T+ IK++L L++GS++ LD LAG Sbjct: 274 VFQSFDEDSSSKGKKDKENLDLILDVPLTITVELGKTKKLIKDILELSEGSIIELDKLAG 333 Query: 95 EPLDILINGYLIAQGEVVVVADKYGVRITDIITPSERMRRL 135 EP+DIL NG IA+GEVVV+ + +GVRI DI+ S+R+ + Sbjct: 334 EPVDILANGKYIAKGEVVVIDENFGVRIIDIVHQSKRISNI 374 >UniRef50_C0R179 Flagellar motor switch protein n=2 Tax=Brachyspira RepID=C0R179_BRAHW Length = 360 Score = 102 bits (254), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 49/92 (53%), Positives = 70/92 (76%), Gaps = 1/92 (1%) Query: 46 DVSGTLQDIDLIMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYL 105 DV GT +I L+MD+ + +TVELGR MTI+++L L +GS++ L LAGEP+D+L+NG L Sbjct: 270 DVQGT-GNIGLLMDVTMNMTVELGRATMTIRDILGLGEGSIIELQKLAGEPVDLLVNGKL 328 Query: 106 IAQGEVVVVADKYGVRITDIITPSERMRRLSR 137 IA+GEVVV+ + +GVR+TDII P +R+ R Sbjct: 329 IAKGEVVVIDENFGVRVTDIINPMDRLTNKPR 360 >UniRef50_B2S3V9 Flagellar motor switch protein n=2 Tax=Treponema pallidum RepID=B2S3V9_TREPS Length = 348 Score = 101 bits (252), Expect = 7e-21, Method: Compositional matrix adjust. Identities = 52/105 (49%), Positives = 75/105 (71%), Gaps = 3/105 (2%) Query: 28 STSSKSAAETVFQQFGGGDVSGTLQDIDLIMDIPVKLTVELGRTRMTIKELLRLTQGSVV 87 S S +S Q GG G +I LIMD+ +++TVELGRTRM IK++L + +G ++ Sbjct: 244 SPSVQSVQFHPLQNAAGGAEQG---NIGLIMDVFMEVTVELGRTRMMIKDILGMGEGHII 300 Query: 88 ALDGLAGEPLDILINGYLIAQGEVVVVADKYGVRITDIITPSERM 132 LD LAGEP+DIL+N LIA+GEVVV+ + +GVR+T+I++P ER+ Sbjct: 301 ELDKLAGEPVDILVNHKLIAKGEVVVIDENFGVRVTEILSPGERI 345 >UniRef50_A5D0K1 Flagellum motor switch protein n=4 Tax=Bacteria RepID=A5D0K1_PELTS Length = 422 Score = 101 bits (252), Expect = 7e-21, Method: Compositional matrix adjust. Identities = 50/84 (59%), Positives = 65/84 (77%) Query: 54 IDLIMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQGEVVV 113 +DLI+DIP+K+TV LGRTR IK++L LT GSVV L L EP+++L+NG L+A GEVVV Sbjct: 339 LDLILDIPLKVTVILGRTRWPIKDILGLTPGSVVELQNLVDEPVEVLVNGVLVAFGEVVV 398 Query: 114 VADKYGVRITDIITPSERMRRLSR 137 V + +GVRIT II P ER++ L R Sbjct: 399 VNENFGVRITSIIGPEERLQNLRR 422 >UniRef50_A6TRP4 CheC, inhibitor of MCP methylation n=11 Tax=Clostridia RepID=A6TRP4_ALKMQ Length = 393 Score = 101 bits (251), Expect = 7e-21, Method: Compositional matrix adjust. Identities = 45/97 (46%), Positives = 68/97 (70%) Query: 39 FQQFGGGDVSGTLQDIDLIMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLD 98 FQ F G ++I LI D+P+ +TVELGRT I E+L G+++ L+ + GEPLD Sbjct: 297 FQSFDQQSNRGLPENIALIQDVPLSVTVELGRTVKKISEVLEFGPGTIIELEKVVGEPLD 356 Query: 99 ILINGYLIAQGEVVVVADKYGVRITDIITPSERMRRL 135 IL+NG +A+GEVVV+ + YG+RITDI+ P++R+ ++ Sbjct: 357 ILVNGQYVAKGEVVVIDENYGIRITDIVAPAKRLSKI 393 >UniRef50_A4A5Y8 Flagellar motor switch protein fliN n=3 Tax=unclassified Gammaproteobacteria RepID=A4A5Y8_9GAMM Length = 117 Score = 100 bits (248), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 45/84 (53%), Positives = 69/84 (82%) Query: 53 DIDLIMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQGEVV 112 D+DL+MD+ V L+VE+GRT++ IK+LL L QGS+V+LD EPLD+++NG LIA+GEVV Sbjct: 34 DLDLLMDVQVTLSVEIGRTKLPIKDLLALNQGSIVSLDRGVKEPLDLMVNGTLIARGEVV 93 Query: 113 VVADKYGVRITDIITPSERMRRLS 136 A ++G+R+ D+++PSER+++L Sbjct: 94 ESAGQFGLRLIDVVSPSERLKKLK 117 >UniRef50_C1TKI4 Flagellar motor switch protein FliN n=1 Tax=Dethiosulfovibrio peptidovorans DSM 11002 RepID=C1TKI4_9BACT Length = 384 Score = 99.4 bits (246), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 44/83 (53%), Positives = 66/83 (79%) Query: 53 DIDLIMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQGEVV 112 +I LI DIPV++TVELGRTR ++ E+L GSV+ LD +AGEP+D+L+NG LIA+GEVV Sbjct: 300 NIGLIADIPVRVTVELGRTRKSVGEVLSFAPGSVIELDKMAGEPVDVLVNGKLIAKGEVV 359 Query: 113 VVADKYGVRITDIITPSERMRRL 135 V+ + +GVR+T+I+ E+++ + Sbjct: 360 VIDENFGVRVTEILNVGEKIQSI 382 >UniRef50_C1I888 Flagellar switch protein FliY n=1 Tax=Clostridium sp. 7_2_43FAA RepID=C1I888_9CLOT Length = 370 Score = 98.2 bits (243), Expect = 8e-20, Method: Compositional matrix adjust. Identities = 47/97 (48%), Positives = 74/97 (76%) Query: 39 FQQFGGGDVSGTLQDIDLIMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLD 98 F+ G V + ++IDLI+D+P++++V LGRT+ +IK++L L+ GS++ LD LA EP++ Sbjct: 273 FEPLSQGVVGESHRNIDLILDVPLEVSVVLGRTKKSIKDILDLSTGSLIELDKLAEEPVE 332 Query: 99 ILINGYLIAQGEVVVVADKYGVRITDIITPSERMRRL 135 +LING IA GEVVVV + +GVRIT I++ ++R+R L Sbjct: 333 VLINGKKIAYGEVVVVDENFGVRITSIVSGADRIRTL 369 >UniRef50_A9BEY5 CheC, inhibitor of MCP methylation / FliN fusion protein n=1 Tax=Petrotoga mobilis SJ95 RepID=A9BEY5_PETMO Length = 372 Score = 97.8 bits (242), Expect = 9e-20, Method: Compositional matrix adjust. Identities = 42/85 (49%), Positives = 68/85 (80%) Query: 51 LQDIDLIMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQGE 110 L ++L++D+P++L VELG T++ ++E+L L +GS++ L+ LAGEPLDI NG LIA+GE Sbjct: 287 LSKLELLLDVPLELKVELGSTKLNLREILELHEGSMIQLNKLAGEPLDIYANGRLIARGE 346 Query: 111 VVVVADKYGVRITDIITPSERMRRL 135 VVV+ + +G+R+T+I++ ERM+ L Sbjct: 347 VVVIDENFGIRVTEIVSLRERMKTL 371 >UniRef50_C8W1I6 CheC, inhibitor of MCP methylation / FliN fusion protein n=1 Tax=Desulfotomaculum acetoxidans DSM 771 RepID=C8W1I6_DESAS Length = 572 Score = 97.4 bits (241), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 45/82 (54%), Positives = 66/82 (80%) Query: 54 IDLIMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQGEVVV 113 I+LI+D+P+ +TV LG+T+ IK++L LT GSVV L L EP+++L+NG L+A+GEVVV Sbjct: 488 INLILDVPLNVTVVLGKTKKPIKDVLGLTPGSVVELGALVEEPVEVLVNGTLVARGEVVV 547 Query: 114 VADKYGVRITDIITPSERMRRL 135 V + +GVRIT++ITP ER++ L Sbjct: 548 VNENFGVRITNVITPQERIQYL 569 >UniRef50_C2ED81 Flagellar motor switch protein FliY n=1 Tax=Lactobacillus ruminis ATCC 25644 RepID=C2ED81_9LACO Length = 409 Score = 97.1 bits (240), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 48/98 (48%), Positives = 70/98 (71%), Gaps = 3/98 (3%) Query: 39 FQQF-GGGDVSGTLQDIDLIMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPL 97 FQ G V G ++DL+MDIP+ L+V LG ++ +++E+L GSV+ L+ L EPL Sbjct: 313 FQTLDGHAQVEG--DNLDLLMDIPLNLSVVLGTSKKSVREILSFNTGSVIELEKLTDEPL 370 Query: 98 DILINGYLIAQGEVVVVADKYGVRITDIITPSERMRRL 135 DIL+NG LIAQGEVVV+ D +GVRIT+I++ S+R+ + Sbjct: 371 DILLNGKLIAQGEVVVINDNFGVRITNILSQSQRINNM 408 >UniRef50_C4ZAN3 Flagellar motor switch protein n=2 Tax=Clostridiales RepID=C4ZAN3_EUBR3 Length = 404 Score = 96.7 bits (239), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 41/76 (53%), Positives = 62/76 (81%) Query: 52 QDIDLIMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQGEV 111 ++IDLIMD+P+++TVELGRT+ +I E+L G ++ L+ LAGEP+DIL+NG +A+GEV Sbjct: 320 ENIDLIMDVPLEVTVELGRTKKSISEILDFGPGKIIELNKLAGEPIDILVNGKYVAKGEV 379 Query: 112 VVVADKYGVRITDIIT 127 VV+ + +GVRIT+I+ Sbjct: 380 VVIEESFGVRITEIVN 395 >UniRef50_B2V6S4 Flagellar motor switch protein FliN n=3 Tax=Sulfurihydrogenibium RepID=B2V6S4_SULSY Length = 194 Score = 96.3 bits (238), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 53/146 (36%), Positives = 89/146 (60%), Gaps = 11/146 (7%) Query: 2 SDMNNPADDNNGAMDDL---WAEALSEQKSTS-SKSAAETVFQQ------FGGGDVSGT- 50 S+M N + G+ +DL W+E L E+KS S + +T ++ F + S Sbjct: 44 SEMLNESGKKEGSQEDLAAQWSEMLHEEKSESVDANTHQTPLKESEKKESFTKEEFSPEI 103 Query: 51 LQDIDLIMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQGE 110 L +D+++DIP+ +TVE+G M+I+E+L+L SV+ LD EP+D+ +NG L+A+GE Sbjct: 104 LNKLDILLDIPITITVEVGSKSMSIEEILKLAPSSVIDLDKYLNEPIDLKVNGVLVAKGE 163 Query: 111 VVVVADKYGVRITDIITPSERMRRLS 136 + V D + ++IT+I+T ER+R +S Sbjct: 164 LYQVDDNFAIKITEILTKEERVRLVS 189 >UniRef50_C5VT98 Flagellar motor switch phosphatase FliY n=1 Tax=Clostridium botulinum D str. 1873 RepID=C5VT98_CLOBO Length = 394 Score = 95.9 bits (237), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 44/97 (45%), Positives = 71/97 (73%) Query: 39 FQQFGGGDVSGTLQDIDLIMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLD 98 F +++G Q+IDLI+D+P++++V LG+T+ +IK++L L GS++ LD LA EP++ Sbjct: 296 FAPLQESNINGAPQNIDLILDVPLEISVVLGKTKKSIKDILALGTGSLIELDKLAEEPVE 355 Query: 99 ILINGYLIAQGEVVVVADKYGVRITDIITPSERMRRL 135 I +NG IA GEVVVV + +GVRI +I++ ER++ L Sbjct: 356 IYVNGKKIAYGEVVVVDENFGVRIVNIVSGEERVKSL 392 >UniRef50_Q89AZ3 Flagellar motor switch protein fliN n=1 Tax=Buchnera aphidicola (Baizongia pistaciae) RepID=FLIN_BUCBP Length = 134 Score = 95.9 bits (237), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 48/114 (42%), Positives = 71/114 (62%), Gaps = 3/114 (2%) Query: 16 DDLWAEALSEQKSTSSKSAAETVFQQFGGGDVSGTLQDIDLIMDIPVKLTVELGRTRMTI 75 +D+ E K SK+ + D+S ++ IMD+PV LT+E+G ++TI Sbjct: 19 EDIKKSCEIEDKIFHSKTVNDVDLNLNSKNDISSKMK---FIMDVPVHLTIEVGTVKITI 75 Query: 76 KELLRLTQGSVVALDGLAGEPLDILINGYLIAQGEVVVVADKYGVRITDIITPS 129 K+LL L S++ LD AG+PL+IL+NGY+IA GE+VV +KYG+RI +II S Sbjct: 76 KDLLELRSKSILVLDKHAGDPLNILVNGYVIATGELVVTENKYGIRIINIIDNS 129 >UniRef50_A6W8L1 Flagellar motor switch protein FliN n=1 Tax=Kineococcus radiotolerans SRS30216 RepID=A6W8L1_KINRD Length = 249 Score = 95.9 bits (237), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 48/90 (53%), Positives = 65/90 (72%) Query: 39 FQQFGGGDVSGTLQDIDLIMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLD 98 F G +G + +DL+ D+ + +TVELGRT MT+++LL LT GSVV LD AG P D Sbjct: 156 FAPAGTPAPAGPRRTMDLLRDVQMDVTVELGRTSMTVQDLLALTPGSVVELDRAAGSPAD 215 Query: 99 ILINGYLIAQGEVVVVADKYGVRITDIITP 128 +L+NG LIA+GEVVVV + Y +RIT+I+TP Sbjct: 216 VLVNGQLIARGEVVVVDEDYAIRITEIVTP 245 >UniRef50_A8U602 Flagellar motor switch protein n=5 Tax=Lactobacillales RepID=A8U602_9LACT Length = 360 Score = 95.5 bits (236), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 43/98 (43%), Positives = 71/98 (72%) Query: 39 FQQFGGGDVSGTLQDIDLIMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLD 98 FQ+ T +++DLIMD+P++ +V LG ++ TIK++L L GSVV L+ + EPL+ Sbjct: 263 FQELTHAGSLKTPRNLDLIMDVPLQFSVMLGESKKTIKDILSLGTGSVVELNKMTDEPLE 322 Query: 99 ILINGYLIAQGEVVVVADKYGVRITDIITPSERMRRLS 136 I +NG LIA+GEVVV+ + +G+RIT+I++ +R++ L+ Sbjct: 323 IYVNGKLIAEGEVVVINESFGIRITNILSKEQRIKHLN 360 >UniRef50_B9KJD9 Flagellar switch protein n=5 Tax=Rhodobacter sphaeroides RepID=B9KJD9_RHOSK Length = 98 Score = 95.5 bits (236), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 45/80 (56%), Positives = 66/80 (82%) Query: 52 QDIDLIMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQGEV 111 +++ L+ +I V+LTVE+GRT MTI++LLRL++GSVV LD LAG+PLD+L+NG IA+GEV Sbjct: 15 ENLRLLENIGVRLTVEVGRTEMTIRDLLRLSEGSVVELDRLAGDPLDVLVNGTPIAKGEV 74 Query: 112 VVVADKYGVRITDIITPSER 131 V+V +++G+R II P +R Sbjct: 75 VMVGERFGIRFGQIIEPEKR 94 >UniRef50_D1C1A4 Flagellar motor switch protein FliN n=1 Tax=Sphaerobacter thermophilus DSM 20745 RepID=D1C1A4_SPHTD Length = 144 Score = 95.1 bits (235), Expect = 6e-19, Method: Compositional matrix adjust. Identities = 50/111 (45%), Positives = 67/111 (60%) Query: 22 ALSEQKSTSSKSAAETVFQQFGGGDVSGTLQDIDLIMDIPVKLTVELGRTRMTIKELLRL 81 A EQ + S F SG Q I+ + D+ V+LT ELG RM IK +L L Sbjct: 31 APGEQAGGEAASVHPAAFMALSQETQSGGPQSIEFLRDVEVELTAELGTARMQIKHILGL 90 Query: 82 TQGSVVALDGLAGEPLDILINGYLIAQGEVVVVADKYGVRITDIITPSERM 132 GSVV L+ LAGEP+DI++N LIA+GEVVVV +K+ VR+ +I+ P R+ Sbjct: 91 RPGSVVELNRLAGEPVDIMVNKTLIARGEVVVVDEKFAVRVVEIVPPERRL 141 >UniRef50_Q4JMS2 Predicted flagellar motor switch protein n=3 Tax=Bacteria RepID=Q4JMS2_9BACT Length = 110 Score = 95.1 bits (235), Expect = 7e-19, Method: Compositional matrix adjust. Identities = 49/110 (44%), Positives = 78/110 (70%), Gaps = 3/110 (2%) Query: 23 LSEQKSTSSKSAAETVFQQFGGGDVSGTLQDIDLIMDIPVKLTVELGRTRMTIKELLRLT 82 +SE+ + +A ET+ + VS +++ L+ +I V LTVE+G+ + I++LLRL Sbjct: 1 MSEETELAEDAATETMDAE-TAARVSA--ENMRLLENIDVALTVEVGKAEIKIRDLLRLN 57 Query: 83 QGSVVALDGLAGEPLDILINGYLIAQGEVVVVADKYGVRITDIITPSERM 132 +GSV+ LD LAG+PLDIL NG +IA+GEVV+V +++G+R T+I+ P+ RM Sbjct: 58 EGSVIELDRLAGDPLDILANGTMIAKGEVVMVGERFGIRFTEIVDPAARM 107 >UniRef50_A6M1D2 CheC, inhibitor of MCP methylation n=24 Tax=Clostridium RepID=A6M1D2_CLOB8 Length = 398 Score = 94.4 bits (233), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 43/85 (50%), Positives = 69/85 (81%) Query: 51 LQDIDLIMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQGE 110 +++IDLI+D+P+ ++V LGRT+ +I+++L L GS++ LD LA EP++IL+NG IA GE Sbjct: 313 IKNIDLILDVPLDISVVLGRTKKSIQDILNLGTGSLIELDKLAEEPVEILVNGKQIALGE 372 Query: 111 VVVVADKYGVRITDIITPSERMRRL 135 VVVV + +G+RIT+I++ ER++RL Sbjct: 373 VVVVDENFGIRITNIVSSVERIKRL 397 >UniRef50_A9KNE6 CheC, inhibitor of MCP methylation / FliN fusion protein n=2 Tax=Bacteria RepID=A9KNE6_CLOPH Length = 401 Score = 94.4 bits (233), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 44/93 (47%), Positives = 68/93 (73%), Gaps = 1/93 (1%) Query: 35 AETVFQQF-GGGDVSGTLQDIDLIMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLA 93 A FQ F G ++IDL++D+P+++TVELGRT +I+E+L G++V L+ LA Sbjct: 308 APAQFQPFVNTGSPLLQTENIDLLLDVPLEVTVELGRTSKSIREILDFAPGTIVELNRLA 367 Query: 94 GEPLDILINGYLIAQGEVVVVADKYGVRITDII 126 GEP+D+L+NG +A+GEVVV+ + +G+R+TDII Sbjct: 368 GEPIDVLVNGKYVAKGEVVVIEEAFGIRVTDII 400 >UniRef50_Q1NP93 Surface presentation of antigens (SPOA) protein n=2 Tax=Deltaproteobacteria RepID=Q1NP93_9DELT Length = 136 Score = 94.0 bits (232), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 41/84 (48%), Positives = 68/84 (80%) Query: 52 QDIDLIMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQGEV 111 Q++D ++D+P+++TVELGRT M I +LL+LTQGSVV LD AG ++I +N L+ +GEV Sbjct: 52 QNLDFLLDVPLEVTVELGRTSMIINKLLQLTQGSVVELDKAAGASVEIYVNRKLMGKGEV 111 Query: 112 VVVADKYGVRITDIITPSERMRRL 135 VVV +++G+R+T+II+ ++R++ + Sbjct: 112 VVVNERFGIRVTEIISQADRIKSI 135 >UniRef50_C4G689 Putative uncharacterized protein n=1 Tax=Abiotrophia defectiva ATCC 49176 RepID=C4G689_ABIDE Length = 370 Score = 93.2 bits (230), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 40/75 (53%), Positives = 62/75 (82%) Query: 52 QDIDLIMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQGEV 111 ++I LIMD+P+++TVELGRT TIKE+L + G+++ L+ LAGE +D+L+NG +A+GEV Sbjct: 295 ENIGLIMDVPLEVTVELGRTNKTIKEILDFSPGTIIELNKLAGEAIDLLVNGKYVAKGEV 354 Query: 112 VVVADKYGVRITDII 126 VV+ D +G+RIT+I+ Sbjct: 355 VVIEDNFGIRITEIV 369 >UniRef50_Q6AJS8 Probable flagellar motor switch protein (FliN) n=1 Tax=Desulfotalea psychrophila RepID=Q6AJS8_DESPS Length = 123 Score = 92.4 bits (228), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 36/86 (41%), Positives = 69/86 (80%) Query: 52 QDIDLIMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQGEV 111 + +D + D+P++++VE+GR+++ IK+LL + +G V+ L+ +AG+PLD+ +N LIA+GE Sbjct: 38 RSLDFLYDVPLEVSVEVGRSKILIKDLLNMGEGYVIELNKVAGDPLDLYVNSRLIARGEA 97 Query: 112 VVVADKYGVRITDIITPSERMRRLSR 137 V++ DK+G+R+TD+++ S+R+ RL + Sbjct: 98 VMIGDKFGIRLTDVVSASDRLERLGK 123 >UniRef50_B9L5A1 Flagellar motor switch phosphatase FliY (CheY-Pphosphatase fliY) (Flagellar motor switch protein fliY) n=1 Tax=Thermomicrobium roseum DSM 5159 RepID=B9L5A1_THERP Length = 128 Score = 92.4 bits (228), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 53/117 (45%), Positives = 73/117 (62%), Gaps = 5/117 (4%) Query: 21 EALSEQKSTSSKSAAETVFQQFGGGD-----VSGTLQDIDLIMDIPVKLTVELGRTRMTI 75 + L+ + SS ET Q+ D + Q ID + D+ V+LT ELG RM I Sbjct: 6 DTLNRGQEPSSVRPPETPIQEARFVDLRDQPIGNGRQGIDFLRDVEVELTAELGSARMRI 65 Query: 76 KELLRLTQGSVVALDGLAGEPLDILINGYLIAQGEVVVVADKYGVRITDIITPSERM 132 K +L L GSVV LD LAGEP+++ IN LIA+GEVVVV +K+ VRIT+I++P +R+ Sbjct: 66 KHILGLRPGSVVELDRLAGEPVELTINKTLIARGEVVVVDEKFAVRITEIVSPEKRL 122 >UniRef50_Q3ADB7 Flagellar motor switch protein n=1 Tax=Carboxydothermus hydrogenoformans Z-2901 RepID=Q3ADB7_CARHZ Length = 347 Score = 92.0 bits (227), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 46/118 (38%), Positives = 77/118 (65%), Gaps = 4/118 (3%) Query: 18 LWAEALSEQKSTSSKSAAETVFQQFGGGDVSGTLQDIDLIMDIPVKLTVELGRTRMTIKE 77 + E L K+T+ + E +QF V T + ++LI+DIP+K+ V LGRTR IKE Sbjct: 234 MAHEMLEGAKATNIEKKVEKAEEQF----VLPTDEKLELILDIPLKVEVVLGRTRRPIKE 289 Query: 78 LLRLTQGSVVALDGLAGEPLDILINGYLIAQGEVVVVADKYGVRITDIITPSERMRRL 135 +L G+++ LD L E +++L+NG L+A+GE+VVV + +G++I I++P ER+ ++ Sbjct: 290 ILSFGPGAIIDLDQLVDEDVEVLVNGTLVAKGEIVVVGENFGIKINQILSPKERLSKI 347 >UniRef50_C4Z5H2 Flagellar motor switch protein FliN/FliY n=3 Tax=Bacteria RepID=C4Z5H2_EUBE2 Length = 437 Score = 91.3 bits (225), Expect = 8e-18, Method: Compositional matrix adjust. Identities = 45/94 (47%), Positives = 68/94 (72%), Gaps = 3/94 (3%) Query: 35 AETVFQQFGGGDVSGTLQ--DIDLIMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDGL 92 A FQ F DV+ Q +I+LI D+P+++TVELGRT +IK++L G++V L+ + Sbjct: 344 APAAFQPFAT-DVNPISQKENIELIKDVPLEVTVELGRTTKSIKDILEFAPGTIVELNKI 402 Query: 93 AGEPLDILINGYLIAQGEVVVVADKYGVRITDII 126 AGE +D+L+NG +A+GEVVV+ + +GVRIT+II Sbjct: 403 AGESVDVLVNGKYVAKGEVVVIEESFGVRITEII 436 >UniRef50_Q7ULU7 Flagellar motor switch protein fliN n=1 Tax=Rhodopirellula baltica RepID=Q7ULU7_RHOBA Length = 141 Score = 91.3 bits (225), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 47/103 (45%), Positives = 71/103 (68%), Gaps = 5/103 (4%) Query: 32 KSAAETVFQQFGGGDVSGT-----LQDIDLIMDIPVKLTVELGRTRMTIKELLRLTQGSV 86 +S V + F GD+S D+DL+ ++ + L +ELGRT+M ++E+LRL GSV Sbjct: 38 ESTERDVPRPFALGDLSPNSLGEAAHDVDLLGEVEMDLRIELGRTQMRLEEVLRLRAGSV 97 Query: 87 VALDGLAGEPLDILINGYLIAQGEVVVVADKYGVRITDIITPS 129 VALD LAG+P+DI +NG LIA+GEV+V+ D + VR+T+++ S Sbjct: 98 VALDKLAGDPVDIYVNGRLIARGEVLVMNDNFCVRVTELVGAS 140 >UniRef50_UPI0001C312B0 flagellar motor switch protein FliN n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C312B0 Length = 130 Score = 90.9 bits (224), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 40/75 (53%), Positives = 59/75 (78%) Query: 52 QDIDLIMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQGEV 111 D+ + D+PV+L VE+GRTRMT+ E L L GS+V L+ +AGEP+D+L+NG IA GEV Sbjct: 24 NDLGRLSDVPVELAVEIGRTRMTVGETLELRPGSIVVLNRMAGEPVDLLVNGTPIAHGEV 83 Query: 112 VVVADKYGVRITDII 126 VV+ +++G+RITD++ Sbjct: 84 VVIDEEFGLRITDVL 98 >UniRef50_Q1Q6T3 Strong similar to flagellar motor switch protein FliN n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1Q6T3_9BACT Length = 120 Score = 90.5 bits (223), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 48/120 (40%), Positives = 78/120 (65%), Gaps = 11/120 (9%) Query: 24 SEQKSTSSKSAAETVFQQF--------GGGDVSGTLQDIDLIMDIPVKLTVELGRTRMTI 75 +EQK + + F Q GG+ + ++DLI+D+ V ++VELGR M I Sbjct: 3 TEQKDDAQPTIESVEFSQLIPEEMDSQKGGE---GMPNLDLILDVTVPVSVELGRANMLI 59 Query: 76 KELLRLTQGSVVALDGLAGEPLDILINGYLIAQGEVVVVADKYGVRITDIITPSERMRRL 135 K++L L+QGS+V L+ +AG P+++L+ G L+A+GEVVVV +++G++IT I P +R+R L Sbjct: 60 KDILALSQGSIVELEKVAGTPVELLVRGKLLARGEVVVVEERFGLKITAICGPQDRVRNL 119 >UniRef50_Q2RKD7 Flagellar motor switch FliN n=1 Tax=Moorella thermoacetica ATCC 39073 RepID=Q2RKD7_MOOTA Length = 124 Score = 90.5 bits (223), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 43/87 (49%), Positives = 57/87 (65%) Query: 39 FQQFGGGDVSGTLQDIDLIMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLD 98 F G D I D+P++L ELGRTRMT+KE+L L GSV+ LD LAGEP+D Sbjct: 29 FAPLQPAPAPGVTADFKRIADVPLRLKAELGRTRMTVKEILDLKDGSVIVLDKLAGEPVD 88 Query: 99 ILINGYLIAQGEVVVVADKYGVRITDI 125 +L+N +A+GEVVV+ D +GVRI + Sbjct: 89 LLVNDIPLAKGEVVVINDAFGVRINSL 115 >UniRef50_B4U6V5 Flagellar motor switch protein FliN n=1 Tax=Hydrogenobaculum sp. Y04AAS1 RepID=B4U6V5_HYDS0 Length = 149 Score = 89.7 bits (221), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 53/130 (40%), Positives = 78/130 (60%), Gaps = 5/130 (3%) Query: 7 PADDNNGAMDDLWAEALSEQKSTSSKSAAETVFQQFGGGDVSGTLQDIDLIMDIPVKLTV 66 P N+ + LW EA+ Q T +S+AE Q D+S +D+ I+DIP+ +TV Sbjct: 23 PTPQNDEDLMKLWEEAIQAQAQT--ESSAENQQAQATTQDIS---KDLQRILDIPLSITV 77 Query: 67 ELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQGEVVVVADKYGVRITDII 126 +G T +TIKELL L GSV+ALD + + NG LIA+ E+VVV + +G+RI +II Sbjct: 78 VIGTTVITIKELLNLRPGSVMALDESINSFVSVYANGKLIAKAELVVVGENFGIRIAEII 137 Query: 127 TPSERMRRLS 136 ER++ L+ Sbjct: 138 EKEERVKSLA 147 >UniRef50_Q44903 Flagellar motor switch protein fliN n=21 Tax=Spirochaetales RepID=FLIN_BORBU Length = 113 Score = 89.7 bits (221), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 40/71 (56%), Positives = 61/71 (85%) Query: 56 LIMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQGEVVVVA 115 L+MD+ ++LTVELGRT IK++L +++G+++ LD LAGEP+DIL+NG ++A+GEVVV+ Sbjct: 38 LLMDVSMQLTVELGRTERKIKDILGMSEGTIITLDKLAGEPVDILVNGKIVAKGEVVVID 97 Query: 116 DKYGVRITDII 126 + +GVRIT+II Sbjct: 98 ENFGVRITEII 108 >UniRef50_C0QPC5 Flagellar motor switch protein FliN n=2 Tax=Aquificales RepID=C0QPC5_PERMH Length = 190 Score = 88.6 bits (218), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 37/86 (43%), Positives = 63/86 (73%) Query: 52 QDIDLIMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQGEV 111 + +DL+MDIP++++VE+G T + ++E+L+L ++V LD +P+D+ +NG LIA+GE+ Sbjct: 102 EKLDLLMDIPLEVSVEIGSTHLPLEEILKLNPNNIVELDKFINQPVDLKVNGKLIAKGEL 161 Query: 112 VVVADKYGVRITDIITPSERMRRLSR 137 V D +G++IT IIT ERM+ L+ Sbjct: 162 YTVEDHFGIKITSIITVQERMKLLTE 187 >UniRef50_C7R0I7 Flagellar motor switch protein FliN n=1 Tax=Jonesia denitrificans DSM 20603 RepID=C7R0I7_JONDD Length = 259 Score = 88.6 bits (218), Expect = 6e-17, Method: Compositional matrix adjust. Identities = 49/113 (43%), Positives = 76/113 (67%), Gaps = 2/113 (1%) Query: 20 AEALSEQKSTSSKSAAETVFQQFGGGDV-SGTLQD-IDLIMDIPVKLTVELGRTRMTIKE 77 A A + Q S+ S E + F + SGT D + L+ D+ + LTVE+GR ++ +++ Sbjct: 144 ASARTAQAEPSAPSPTEPEIRPFTPPMMGSGTGDDKLRLLYDVEMTLTVEIGRAKLPVRQ 203 Query: 78 LLRLTQGSVVALDGLAGEPLDILINGYLIAQGEVVVVADKYGVRITDIITPSE 130 +L LT GS+V LD +AG P D+L+NG+L+A+GEVVVV + YG+R+T+II +E Sbjct: 204 VLDLTPGSIVELDRVAGAPADLLVNGHLVARGEVVVVDEDYGLRVTEIIDTTE 256 >UniRef50_A1QZ73 Flagellar motor switch protein FliN n=7 Tax=Spirochaetaceae RepID=A1QZ73_BORT9 Length = 114 Score = 88.2 bits (217), Expect = 7e-17, Method: Compositional matrix adjust. Identities = 40/71 (56%), Positives = 61/71 (85%) Query: 56 LIMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQGEVVVVA 115 L+MD+ +++TVELGRT IK++L +++G+++ LD LAGEP+DIL+NG +IA+GEVVV+ Sbjct: 39 LLMDVSMQVTVELGRTERKIKDILGMSEGTIITLDKLAGEPVDILVNGKVIAKGEVVVID 98 Query: 116 DKYGVRITDII 126 + +GVRIT+II Sbjct: 99 ENFGVRITEII 109 >UniRef50_C0C1N9 Putative uncharacterized protein n=1 Tax=Clostridium hylemonae DSM 15053 RepID=C0C1N9_9CLOT Length = 460 Score = 88.2 bits (217), Expect = 7e-17, Method: Compositional matrix adjust. Identities = 43/95 (45%), Positives = 68/95 (71%), Gaps = 10/95 (10%) Query: 32 KSAAETVFQQFGGGDVSGTLQDIDLIMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDG 91 +SA ET Q+ +++LIM +P++++VE+GRT+ +K++L L +GS+V LD Sbjct: 368 QSAEETELQE----------SNLELIMGVPLEVSVEIGRTKKLVKDVLELNKGSLVVLDK 417 Query: 92 LAGEPLDILINGYLIAQGEVVVVADKYGVRITDII 126 LAGE +D+ +NG IAQG+VVVV D +G+RIT+I+ Sbjct: 418 LAGEQVDLFVNGQCIAQGDVVVVDDNFGIRITEIL 452 >UniRef50_A0LDK9 Flagellar motor switch protein FliN n=1 Tax=Magnetococcus sp. MC-1 RepID=A0LDK9_MAGSM Length = 137 Score = 87.4 bits (215), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 45/101 (44%), Positives = 67/101 (66%), Gaps = 3/101 (2%) Query: 35 AETVFQQFGGGDVSGTLQDIDLIMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAG 94 AE F GD+ L+ L+MD+P++++V LG IK+LLRL +GS+V L+ A Sbjct: 39 AENPFDVSTDGDLPKNLE---LLMDVPLEVSVRLGSVSYQIKDLLRLNKGSLVELEKEAD 95 Query: 95 EPLDILINGYLIAQGEVVVVADKYGVRITDIITPSERMRRL 135 +PL+I +N L+A GEVV++ DK G+RITDI++ ER+ L Sbjct: 96 DPLEIYVNDRLLAYGEVVMIKDKLGIRITDIVSLKERLENL 136 >UniRef50_B0MPD4 Putative uncharacterized protein n=1 Tax=Eubacterium siraeum DSM 15702 RepID=B0MPD4_9FIRM Length = 419 Score = 87.4 bits (215), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 41/115 (35%), Positives = 77/115 (66%), Gaps = 1/115 (0%) Query: 23 LSEQKSTSSKSAAETVFQQFGGGDVSGTLQDIDLIMDIPVKLTVELGRTRMTIKELLRLT 82 + Q + + ++A F+ F S +++ L+MD+P++++VE+G T+ IK++L + Sbjct: 304 MQPQPAVNYRNAQLAQFENFEAPLGSEQKENLQLLMDVPLQISVEIGSTKKKIKDILEFS 363 Query: 83 QGSVVALDGLAGEPLDILINGYLIAQGEVVVVADKYGVRITDIITPSERMRRLSR 137 QG+++ L+ AG P+D+++NG LIA+G+VVV+ D + VRIT+I+ S+ M L + Sbjct: 364 QGTIIELERQAGAPVDVMVNGNLIARGDVVVIDDNFAVRITEIVK-SKFMDSLGK 417 >UniRef50_Q67K24 Flagellar motor switch protein n=1 Tax=Symbiobacterium thermophilum RepID=Q67K24_SYMTH Length = 126 Score = 86.7 bits (213), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 39/84 (46%), Positives = 62/84 (73%) Query: 45 GDVSGTLQDIDLIMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGY 104 G G + L+ D+ ++LTVELG++R +++E+L + GSV+ LD AGE +D+L+NG Sbjct: 37 GSAQGDPSPLGLLADVELELTVELGQSRRSLREILAMGPGSVLELDKHAGEAVDLLVNGQ 96 Query: 105 LIAQGEVVVVADKYGVRITDIITP 128 L+A+GEVVV+ + YG+RIT++I P Sbjct: 97 LVARGEVVVIGENYGIRITELINP 120 >UniRef50_A0LT68 Flagellar motor switch protein FliN n=1 Tax=Acidothermus cellulolyticus 11B RepID=A0LT68_ACIC1 Length = 123 Score = 86.3 bits (212), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 41/79 (51%), Positives = 62/79 (78%), Gaps = 1/79 (1%) Query: 54 IDLIMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQGEVVV 113 ++L+ ++ + +T ELGRTRMT++ELL L G VV L+ AG P+D+ +NG LIA+GEVVV Sbjct: 42 LELLQNVEMGVTAELGRTRMTVRELLSLAPGMVVELNRAAGSPIDLYVNGTLIARGEVVV 101 Query: 114 VADKYGVRITDIITP-SER 131 + +++GVRI++I+ P SER Sbjct: 102 IDEEFGVRISEIVGPDSER 120 >UniRef50_C6WJP8 Flagellar motor switch protein FliN n=1 Tax=Actinosynnema mirum DSM 43827 RepID=C6WJP8_ACTMD Length = 250 Score = 85.9 bits (211), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 38/77 (49%), Positives = 61/77 (79%) Query: 54 IDLIMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQGEVVV 113 ++L+ + +++T ELGRTR+T++ELL L+ G+V+ LD AG P D+L+NG LIA+GEVVV Sbjct: 168 LELLHGVEMEVTAELGRTRLTVRELLSLSNGAVIELDRAAGSPADLLVNGRLIARGEVVV 227 Query: 114 VADKYGVRITDIITPSE 130 + + +G+R+T+II P + Sbjct: 228 IDENFGIRVTEIIKPGD 244 >UniRef50_C8WWF9 CheC, inhibitor of MCP methylation / FliN fusion protein n=2 Tax=Alicyclobacillus acidocaldarius RepID=C8WWF9_ALIAD Length = 381 Score = 85.5 bits (210), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 46/120 (38%), Positives = 70/120 (58%), Gaps = 3/120 (2%) Query: 16 DDLWAEALSEQKSTSSKSAAETVFQQFGGGDV---SGTLQDIDLIMDIPVKLTVELGRTR 72 DD A + S + F F G + + ++ L+ D+P+ +TVELGR + Sbjct: 258 DDAQAANRGREDEGPSVAVRRPAFPDFDEGVTPRDARPVANLSLLYDVPLNVTVELGRAK 317 Query: 73 MTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQGEVVVVADKYGVRITDIITPSERM 132 I+E+L L GS++ LD LAGEP+DI +N IA GEVVV+ + +GVR+TDI+ +R+ Sbjct: 318 KLIREILELAPGSILELDKLAGEPVDIYVNQKKIAIGEVVVIDENFGVRVTDIVQADKRI 377 >UniRef50_C1ZEF0 Flagellar motor switch protein FliN n=1 Tax=Planctomyces limnophilus DSM 3776 RepID=C1ZEF0_PLALI Length = 193 Score = 85.1 bits (209), Expect = 6e-16, Method: Compositional matrix adjust. Identities = 50/139 (35%), Positives = 81/139 (58%), Gaps = 16/139 (11%) Query: 5 NNPADDNNGAMDDL------WAEALSEQKSTSS-------KSAAETVFQQFGGG---DVS 48 + PA N A L A ALSE+ + ++ A F++FG + Sbjct: 52 HQPASRNTSAEQSLRQAEQQLAAALSEELPPRNMRGLPPGEAPARFEFEEFGTPFPTRAA 111 Query: 49 GTLQDIDLIMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQ 108 + +D + D+ + + +ELGRT + I E+++L +G+VV LD LAG+P+DIL+NG L+A+ Sbjct: 112 APVFPLDALQDVELDIRIELGRTELLIDEVMQLREGAVVPLDKLAGDPVDILVNGKLLAR 171 Query: 109 GEVVVVADKYGVRITDIIT 127 GEV+V+ D + VRI +I+T Sbjct: 172 GEVLVLNDNFCVRIAEILT 190 >UniRef50_D0MGA9 Flagellar motor switch protein FliN n=1 Tax=Rhodothermus marinus DSM 4252 RepID=D0MGA9_RHOM4 Length = 293 Score = 84.7 bits (208), Expect = 7e-16, Method: Compositional matrix adjust. Identities = 42/95 (44%), Positives = 67/95 (70%), Gaps = 3/95 (3%) Query: 40 QQFGGGDVSGTLQDIDLIMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDI 99 ++ G G V G L +L+ D+ +++ VELGR R+ + ++LRLT GS++ L+ L GEPL+I Sbjct: 199 ERIGDGGVKGNL---ELLADVELEIVVELGRRRLPLADVLRLTTGSIIELEKLVGEPLEI 255 Query: 100 LINGYLIAQGEVVVVADKYGVRITDIITPSERMRR 134 NG LIA+GE VV+ +++GVRIT ++T S + + Sbjct: 256 YANGRLIAEGEAVVIDEQFGVRITSLVTGSRQREK 290 >UniRef50_P57183 Flagellar motor switch protein fliN n=3 Tax=Buchnera aphidicola (Acyrthosiphon pisum) RepID=FLIN_BUCAI Length = 133 Score = 84.3 bits (207), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 35/69 (50%), Positives = 56/69 (81%) Query: 57 IMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQGEVVVVAD 116 I+++PV +TVELG +R+ IK+ L+ ++GS++ L+ EPL+I +NG+LIA GE+VV+ + Sbjct: 54 ILNVPVNITVELGTSRIKIKDFLKFSKGSMLILNESIKEPLNIFMNGHLIASGEIVVLEE 113 Query: 117 KYGVRITDI 125 KYG+RIT+I Sbjct: 114 KYGIRITNI 122 >UniRef50_A8RWD0 Putative uncharacterized protein n=3 Tax=Clostridiales RepID=A8RWD0_9CLOT Length = 368 Score = 84.3 bits (207), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 36/75 (48%), Positives = 59/75 (78%) Query: 53 DIDLIMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQGEVV 112 ++ LIMD+P+ ++VE+G+TR +K++L + G+VV LD + P+DI++NG LIA+GEVV Sbjct: 285 NLSLIMDVPLNVSVEIGKTRRRLKDVLNFSNGTVVELDKQSDAPVDIIVNGQLIARGEVV 344 Query: 113 VVADKYGVRITDIIT 127 V+ D +GVRI++I+ Sbjct: 345 VIDDNFGVRISEIVN 359 >UniRef50_C2KZ02 Possible flagellar motor switch protein FliY n=1 Tax=Oribacterium sinus F0268 RepID=C2KZ02_9FIRM Length = 472 Score = 84.3 bits (207), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 38/88 (43%), Positives = 64/88 (72%), Gaps = 1/88 (1%) Query: 39 FQQFGGGDVSGTLQDIDLIMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLD 98 F+ GGG + +++M +P++++VE+GRTR +K++L TQGS+V LD +AGE D Sbjct: 377 FENEGGG-AGENPDNREMLMKVPLEISVEIGRTRKLVKDILDFTQGSLVVLDKMAGEQAD 435 Query: 99 ILINGYLIAQGEVVVVADKYGVRITDII 126 + +NG IA+G++VVV + +G+RIT+I+ Sbjct: 436 LYVNGECIAKGDIVVVEENFGIRITEIL 463 >UniRef50_C0GJF1 Flagellar motor switch protein FliN n=1 Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GJF1_9FIRM Length = 141 Score = 84.0 bits (206), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 38/83 (45%), Positives = 61/83 (73%) Query: 53 DIDLIMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQGEVV 112 +++ I+DIP++++V LG+T I +++ L G++V D GEP+DI +NG LIA+GEVV Sbjct: 58 NLERILDIPLRVSVSLGKTEKPILDVVSLAPGAIVDFDRNVGEPVDITLNGKLIARGEVV 117 Query: 113 VVADKYGVRITDIITPSERMRRL 135 VV + +GVRI+ IITP +R+ + Sbjct: 118 VVGEHFGVRISQIITPQQRIENM 140 >UniRef50_D2S982 Flagellar motor switch protein FliN n=1 Tax=Geodermatophilus obscurus DSM 43160 RepID=D2S982_9ACTO Length = 249 Score = 83.6 bits (205), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 40/74 (54%), Positives = 57/74 (77%) Query: 54 IDLIMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQGEVVV 113 +DL+ + +++TVE+GRTRMT+ ELL L G VV LD A P D+L+NG LIA+GEVVV Sbjct: 164 LDLLRHVAMEVTVEIGRTRMTVGELLSLHPGEVVELDRAASAPADLLVNGTLIARGEVVV 223 Query: 114 VADKYGVRITDIIT 127 V + +G+RI++I+T Sbjct: 224 VDEDFGLRISEIVT 237 >UniRef50_Q2RKB6 CheC, inhibitor of MCP methylation n=1 Tax=Moorella thermoacetica ATCC 39073 RepID=Q2RKB6_MOOTA Length = 395 Score = 82.8 bits (203), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 40/86 (46%), Positives = 59/86 (68%) Query: 52 QDIDLIMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQGEV 111 ++IDLI+D+P+ + V LG I+++L L G++V LD L EP+ I +NG IAQGEV Sbjct: 310 RNIDLILDVPLDIEVILGTAMKRIQDILSLAPGAIVELDRLVEEPVQITVNGTPIAQGEV 369 Query: 112 VVVADKYGVRITDIITPSERMRRLSR 137 V+V + +GVRIT I+ P ER+ L + Sbjct: 370 VIVNENFGVRITHILEPYERINHLRQ 395 >UniRef50_A6CER1 Flagellar motor switch protein fliN n=1 Tax=Planctomyces maris DSM 8797 RepID=A6CER1_9PLAN Length = 226 Score = 82.8 bits (203), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 35/72 (48%), Positives = 57/72 (79%) Query: 57 IMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQGEVVVVAD 116 + ++ + L +ELGRT + I+E+L++ +G VV LD LAG+P+DIL+NG +IA+GEV+V+ D Sbjct: 153 LQNVELDLCIELGRTELLIEEVLKMKEGVVVPLDKLAGDPVDILVNGRIIARGEVLVLND 212 Query: 117 KYGVRITDIITP 128 + VR+ +II+P Sbjct: 213 NFCVRVAEIISP 224 >UniRef50_A1SEN5 Flagellar motor switch protein FliN n=1 Tax=Nocardioides sp. JS614 RepID=A1SEN5_NOCSJ Length = 246 Score = 82.8 bits (203), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 39/80 (48%), Positives = 62/80 (77%) Query: 48 SGTLQDIDLIMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIA 107 +G + I+++ + +++TVE+GR RMT++ELL L G+V+ LD AG P D+L+NG LIA Sbjct: 162 TGDRRGIEMLHGVDMEVTVEIGRARMTVRELLDLAPGAVLELDRAAGSPADLLVNGRLIA 221 Query: 108 QGEVVVVADKYGVRITDIIT 127 +GEVVV+ + +G+RIT+I+T Sbjct: 222 RGEVVVIDEDFGLRITEIVT 241 >UniRef50_D0YPX2 Flagellar motor switch protein FliN n=2 Tax=Mobiluncus mulieris RepID=D0YPX2_9ACTO Length = 254 Score = 82.8 bits (203), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 36/83 (43%), Positives = 61/83 (73%) Query: 52 QDIDLIMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQGEV 111 + + L+ D+ + LT E+GRT++ + ++L L+ GSV+ LD AG D+++NG LIA GE+ Sbjct: 171 ESMKLLYDVEMTLTAEIGRTKLAVHDVLDLSPGSVIELDRSAGSAADVMVNGRLIAHGEI 230 Query: 112 VVVADKYGVRITDIITPSERMRR 134 VVV ++YG+RIT+I++ +E+ R Sbjct: 231 VVVDEEYGIRITEIVSLAEQQNR 253 >UniRef50_A6Q2L3 Flagellar motor switch protein FliN n=1 Tax=Nitratiruptor sp. SB155-2 RepID=A6Q2L3_NITSB Length = 133 Score = 82.4 bits (202), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 43/142 (30%), Positives = 82/142 (57%), Gaps = 18/142 (12%) Query: 1 MSDMNNPADDNNGA-------MDDLWAEALSEQKSTSSKSAAETVFQQFGGGDVSGTLQD 53 MS+ NP+ + + D+L A+ + Q+S S++ E ++ Sbjct: 1 MSEETNPSPEEQNSEEQPELSPDELMAQQFA-QESYGSETEEEDRIEK----------SK 49 Query: 54 IDLIMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQGEVVV 113 +++D+P+ + VE+G T+M ++E+L+L SVV L+ EP+D+ +NG +IA+GE+ Sbjct: 50 FSILLDVPLDVIVEIGSTQMPLEEVLKLNPNSVVELNRFIHEPVDLKVNGKVIAKGELYT 109 Query: 114 VADKYGVRITDIITPSERMRRL 135 V + +G++IT ++TP ER++ L Sbjct: 110 VKNNFGLKITHVVTPEERLKIL 131 >UniRef50_C7M222 Flagellar motor switch protein FliN n=1 Tax=Acidimicrobium ferrooxidans DSM 10331 RepID=C7M222_ACIFD Length = 95 Score = 82.0 bits (201), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 42/92 (45%), Positives = 68/92 (73%), Gaps = 1/92 (1%) Query: 46 DVSGTLQDIDLIMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYL 105 +V T ++ ++ ++ ++L+VELGR RM ++ LL LT G V+ LD A P+D+L+NG L Sbjct: 3 EVPETAANLAVLRNVELELSVELGRARMPVRALLALTSGDVIELDRHANAPVDVLVNGTL 62 Query: 106 IAQGEVVVVADKYGVRITDIITPSERMRRLSR 137 +A+GEVVVV D++GVRI +II+ S+ + +L+R Sbjct: 63 VAKGEVVVVDDEFGVRILEIIS-SDEVDQLTR 93 >UniRef50_D2R538 Flagellar motor switch protein FliN n=2 Tax=Planctomycetaceae RepID=D2R538_9PLAN Length = 212 Score = 82.0 bits (201), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 39/93 (41%), Positives = 64/93 (68%) Query: 35 AETVFQQFGGGDVSGTLQDIDLIMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAG 94 A F+ SG ++L+ D+ + L +ELGRT M ++++L+L +GSVV LD LAG Sbjct: 115 APFAFRDLAAAPPSGEKATLELLRDVDLDLRIELGRTEMFLEDVLKLRRGSVVTLDKLAG 174 Query: 95 EPLDILINGYLIAQGEVVVVADKYGVRITDIIT 127 +P+DI +NG LIA+GEV+V+ D + VR+ ++++ Sbjct: 175 DPVDIYVNGRLIARGEVLVLNDNFCVRVAELLS 207 >UniRef50_B8HEJ4 Flagellar motor switch protein FliN n=1 Tax=Arthrobacter chlorophenolicus A6 RepID=B8HEJ4_ARTCA Length = 238 Score = 81.3 bits (199), Expect = 8e-15, Method: Compositional matrix adjust. Identities = 41/80 (51%), Positives = 56/80 (70%) Query: 54 IDLIMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQGEVVV 113 + LI ++ + LTVE+GRTRM++++ L L G V+ LD AG P D+L+NG LIA GEVVV Sbjct: 159 LSLISNVEMSLTVEIGRTRMSVRDALALEPGKVIELDRSAGAPADVLLNGRLIAHGEVVV 218 Query: 114 VADKYGVRITDIITPSERMR 133 V Y VRIT I+ +E +R Sbjct: 219 VDQDYAVRITRILDTAEGLR 238 >UniRef50_A4SI07 Lateral flagellar motor switch protein, lfiN n=2 Tax=Aeromonas RepID=A4SI07_AERS4 Length = 125 Score = 81.3 bits (199), Expect = 8e-15, Method: Compositional matrix adjust. Identities = 47/123 (38%), Positives = 76/123 (61%), Gaps = 13/123 (10%) Query: 4 MNNPADDNNGAMDDLWAEALSEQKSTSSKSAAETVFQQFGGGDVSGTLQDIDLIMDIPVK 63 MN+P D + +D L+ + +S S + A + +Q +D+ IPVK Sbjct: 6 MNDPLDLD--GLDQLFGDDIS-MPSAADYMAPTSSSKQ----------RDLSFFRQIPVK 52 Query: 64 LTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQGEVVVVADKYGVRIT 123 +T+E+ T +++ EL+R+ +G+V+ LD LAGE LD+ +NG L+A+GEVVVV KYG+R+ Sbjct: 53 VTLEVASTEVSLGELMRVEEGAVIELDKLAGETLDVRVNGRLLAKGEVVVVNGKYGLRLV 112 Query: 124 DII 126 D+I Sbjct: 113 DVI 115 >UniRef50_B0P9X9 Putative uncharacterized protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0P9X9_9FIRM Length = 446 Score = 80.9 bits (198), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 41/101 (40%), Positives = 68/101 (67%), Gaps = 2/101 (1%) Query: 37 TVFQQFG--GGDVSGTLQDIDLIMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAG 94 T F QF D + ++DL+M + + ++VE+G+T+ IK+++ QG+V+ L+ AG Sbjct: 341 TQFPQFTVQQTDSPTSNANMDLLMGVSLDVSVEIGQTKRKIKDIIDFGQGTVIELNKQAG 400 Query: 95 EPLDILINGYLIAQGEVVVVADKYGVRITDIITPSERMRRL 135 P+DI++NG L+A+G+VVV+ D +GVRIT+I+ E M L Sbjct: 401 APVDIVVNGRLLARGDVVVIDDNFGVRITEIVGTKELMESL 441 >UniRef50_C6NYG7 Flagellar motor switch protein FliN n=1 Tax=Acidithiobacillus caldus ATCC 51756 RepID=C6NYG7_9GAMM Length = 120 Score = 80.9 bits (198), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 36/74 (48%), Positives = 58/74 (78%), Gaps = 1/74 (1%) Query: 54 IDLIMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQGEVVV 113 +DL++++P++++VELGRTRM K +L+L+QGSV+ L+ GEPL I ING + A GE V+ Sbjct: 35 VDLLVNVPMRISVELGRTRMPFKNILQLSQGSVIELNRAVGEPLTIYINGEIFAYGEAVL 94 Query: 114 V-ADKYGVRITDII 126 V +++GVR+T ++ Sbjct: 95 VNQERFGVRLTALV 108 >UniRef50_Q04RL4 Endoflagellar motor switch protein n=6 Tax=Leptospira RepID=Q04RL4_LEPBJ Length = 174 Score = 79.7 bits (195), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 39/80 (48%), Positives = 59/80 (73%) Query: 53 DIDLIMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQGEVV 112 +++L+MD+ + LTVELGRT M IK++ L +G VV LD GE LDIL NG+L+ +G++V Sbjct: 95 NLNLLMDVNLALTVELGRTNMFIKDVNGLNEGIVVELDKNVGEDLDILANGHLVGRGKLV 154 Query: 113 VVADKYGVRITDIITPSERM 132 + D YG++IT+I+ S R+ Sbjct: 155 AMDDFYGIQITEIVDQSRRL 174 >UniRef50_A5V6A7 Flagellar motor switch protein FliN n=4 Tax=Sphingomonadaceae RepID=A5V6A7_SPHWW Length = 107 Score = 79.7 bits (195), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 41/95 (43%), Positives = 64/95 (67%), Gaps = 1/95 (1%) Query: 43 GGGDVSGTLQDIDLIMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILIN 102 G +++G ++ L+ DIP++L+VE+G T + + EL+ L GSVV LD A E LDI++N Sbjct: 12 GAAELAGR-DNLRLLADIPLRLSVEVGSTSLRLAELMDLNAGSVVELDRQANELLDIMVN 70 Query: 103 GYLIAQGEVVVVADKYGVRITDIITPSERMRRLSR 137 G L+A+GEVV V K+G+R+ DI+ R+ + R Sbjct: 71 GTLVAKGEVVTVNGKFGIRVVDIVAADARLPGIER 105 >UniRef50_B6BN04 Flagellar motor switch FliN n=1 Tax=Campylobacterales bacterium GD 1 RepID=B6BN04_9PROT Length = 288 Score = 79.7 bits (195), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 37/85 (43%), Positives = 62/85 (72%) Query: 51 LQDIDLIMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQGE 110 + +I LIMD+ + + V +G+ +M +K++L + GSV+ L+ LA +PLDIL++ ++IAQGE Sbjct: 202 MNNISLIMDVKLPVRVRIGKKKMLLKDVLNMDIGSVIELNQLANDPLDILVDNHVIAQGE 261 Query: 111 VVVVADKYGVRITDIITPSERMRRL 135 VV+V +GV+IT I + ER+ +L Sbjct: 262 VVIVDGNFGVQITSIGSKRERLTQL 286 >UniRef50_C1A552 Flagellar motor switch protein FliN n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1A552_GEMAT Length = 141 Score = 79.3 bits (194), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 36/73 (49%), Positives = 57/73 (78%) Query: 54 IDLIMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQGEVVV 113 I +++D+ + +++ELGRT MT++E+LRL +GSV+ LD LAGEP+DI + A+GEVVV Sbjct: 57 IGMLLDLTLPVSIELGRTSMTVQEILRLGRGSVIQLDRLAGEPIDIYVGDRRFAEGEVVV 116 Query: 114 VADKYGVRITDII 126 + + +GVRIT ++ Sbjct: 117 LGEHFGVRITRVL 129 >UniRef50_A4Y0Q2 Flagellar motor switch protein FliN n=1 Tax=Pseudomonas mendocina ymp RepID=A4Y0Q2_PSEMY Length = 123 Score = 79.0 bits (193), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 37/73 (50%), Positives = 52/73 (71%) Query: 52 QDIDLIMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQGEV 111 QD+ IPV +T+E+ T +T+KEL+ + GSV+ALD LAGEPLD+ +NG L A+ EV Sbjct: 40 QDLSFFGKIPVNVTLEVASTEITLKELMDVDAGSVIALDKLAGEPLDVKVNGALFAKAEV 99 Query: 112 VVVADKYGVRITD 124 VV+ YG+RI + Sbjct: 100 VVMNGNYGLRIVE 112 >UniRef50_C2BUL2 Flagellar motor switch protein FliN n=1 Tax=Mobiluncus curtisii ATCC 43063 RepID=C2BUL2_9ACTO Length = 250 Score = 78.6 bits (192), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 34/76 (44%), Positives = 58/76 (76%) Query: 52 QDIDLIMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQGEV 111 + + L+ D+ + LT E+GRT++ + ++L L+ GSV+ LD AG D+++NG LIA+GE+ Sbjct: 165 ESMKLLYDVEMTLTAEIGRTKLAVHDVLDLSPGSVIELDRSAGSAADVMVNGRLIARGEI 224 Query: 112 VVVADKYGVRITDIIT 127 VVV ++YG+RIT+I++ Sbjct: 225 VVVDEEYGIRITEIVS 240 >UniRef50_Q2RZE3 Possible flagellar motor switch FliN n=1 Tax=Salinibacter ruber DSM 13855 RepID=Q2RZE3_SALRD Length = 250 Score = 78.6 bits (192), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 40/93 (43%), Positives = 63/93 (67%), Gaps = 4/93 (4%) Query: 43 GGGDVSGTLQDIDLIMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILIN 102 G GD SGT + L+ D+ +++ VELGR + + ++L+LT GSVV L+ + GEPL + N Sbjct: 161 GDGD-SGTFK---LLADVDLEVRVELGRRELPLADVLKLTTGSVVELEKMVGEPLSVYAN 216 Query: 103 GYLIAQGEVVVVADKYGVRITDIITPSERMRRL 135 G LIA+GE VV+ +++GVRIT++ + R + Sbjct: 217 GRLIAEGEAVVIDEQFGVRITNLASEGHREKAF 249 >UniRef50_Q30SP4 Flagellar motor switch FliN n=1 Tax=Sulfurimonas denitrificans DSM 1251 RepID=Q30SP4_SULDN Length = 283 Score = 78.2 bits (191), Expect = 7e-14, Method: Compositional matrix adjust. Identities = 42/111 (37%), Positives = 72/111 (64%), Gaps = 7/111 (6%) Query: 25 EQKSTSSKSAAETVFQQFGGGDVSGTLQDIDLIMDIPVKLTVELGRTRMTIKELLRLTQG 84 ++K+ S+K++A S + +I LIMD+ + + V +G+ +M +K++L + G Sbjct: 178 DRKNESNKNSATVSLS-------SDEMSNIALIMDVKLPVKVRIGKKKMLLKDVLNMDIG 230 Query: 85 SVVALDGLAGEPLDILINGYLIAQGEVVVVADKYGVRITDIITPSERMRRL 135 SV+ L+ LA +PLDIL++ +IA+GEVV+V +GV+IT I T ER+ +L Sbjct: 231 SVIELNQLANDPLDILVDDNVIAEGEVVIVDGNFGVQITSIGTKRERLNQL 281 >UniRef50_Q058C3 Flagellar motor switch protein, C-ring protein n=1 Tax=Buchnera aphidicola str. Cc (Cinara cedri) RepID=Q058C3_BUCCC Length = 134 Score = 78.2 bits (191), Expect = 7e-14, Method: Compositional matrix adjust. Identities = 37/82 (45%), Positives = 56/82 (68%) Query: 46 DVSGTLQDIDLIMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYL 105 + + L D + IPV LT+EL + ++TI+ELL+ +GS++ L+ +PL+I IN YL Sbjct: 49 NANKVLFDSSALSSIPVYLTIELSKKKITIQELLQFKKGSILELEDNINKPLNIFINNYL 108 Query: 106 IAQGEVVVVADKYGVRITDIIT 127 IA GE+VV D YGV+IT ++T Sbjct: 109 IAIGELVVNNDCYGVQITKLLT 130 >UniRef50_D0I457 Flagellar motor switch protein FliN n=2 Tax=Vibrionaceae RepID=D0I457_VIBHO Length = 116 Score = 77.8 bits (190), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 34/85 (40%), Positives = 58/85 (68%) Query: 52 QDIDLIMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQGEV 111 D+ I +IPV LT+E+ T + + +L+ + GSV+ LD L+GEP+D+ +NG L+ EV Sbjct: 31 NDMRFIRNIPVNLTLEVASTELKVGDLMNINVGSVIELDKLSGEPMDVRVNGTLLGHAEV 90 Query: 112 VVVADKYGVRITDIITPSERMRRLS 136 VVV +KYG+R+ +++ + +R L+ Sbjct: 91 VVVNNKYGLRLVNVVDEKDMLRGLA 115 >UniRef50_Q0G104 Flagellar motor switch FliN protein:Surface presentation of antigens (SPOA) protein n=1 Tax=Fulvimarina pelagi HTCC2506 RepID=Q0G104_9RHIZ Length = 131 Score = 77.8 bits (190), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 35/83 (42%), Positives = 61/83 (73%), Gaps = 3/83 (3%) Query: 53 DIDLIMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQGEVV 112 D+DL++D+ V + V LG RM++ ELL+L +GS+V LD G+P+D+++NG +IA+GE+V Sbjct: 41 DLDLVLDVSVTMQVVLGSARMSVSELLKLNRGSIVKLDTKVGDPIDVVVNGRVIARGEIV 100 Query: 113 VV---ADKYGVRITDIITPSERM 132 V+ ++GV +T++ TP ++ Sbjct: 101 VLDQDDQQFGVTLTEVATPGSKL 123 >UniRef50_C1SNF8 Flagellar motor switch protein FliN n=1 Tax=Denitrovibrio acetiphilus DSM 12809 RepID=C1SNF8_9BACT Length = 299 Score = 77.0 bits (188), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 33/83 (39%), Positives = 64/83 (77%) Query: 53 DIDLIMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQGEVV 112 ++DL++DI V ++V++G T+M +K++L + G+++ LD A EP++++IN +IA+GEVV Sbjct: 215 NLDLLLDIDVPVSVKMGSTKMFLKDILTMGSGNIIELDESADEPVELVINNKVIARGEVV 274 Query: 113 VVADKYGVRITDIITPSERMRRL 135 +V +G RI +I++ +ER+++L Sbjct: 275 IVDGYFGFRIKEIVSRAERIKKL 297 >UniRef50_D1BCL8 Flagellar motor switch protein FliN n=1 Tax=Sanguibacter keddieii DSM 10542 RepID=D1BCL8_SANKS Length = 247 Score = 76.6 bits (187), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 33/78 (42%), Positives = 59/78 (75%) Query: 53 DIDLIMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQGEVV 112 ++ L+ D+ + L+ E+GR ++ ++++L L G+V+ LD +AG P D+++NG LIA+GEVV Sbjct: 167 NLRLLYDVEMTLSAEIGRAKLPVRQVLELVPGAVIELDRVAGSPADLMVNGRLIARGEVV 226 Query: 113 VVADKYGVRITDIITPSE 130 V+ + YG+RIT+I+ +E Sbjct: 227 VIDEDYGLRITEIVDLAE 244 >UniRef50_A8UW94 Flagellar motor switch FliN n=1 Tax=Hydrogenivirga sp. 128-5-R1-1 RepID=A8UW94_9AQUI Length = 164 Score = 76.6 bits (187), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 38/74 (51%), Positives = 55/74 (74%) Query: 54 IDLIMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQGEVVV 113 +D +MDIP+ + V +G T + I+EL+ L GSV+ LD EP+DI +NG LIA+GE+VV Sbjct: 74 LDRLMDIPLNVEVVVGETVIQIRELINLGPGSVLELDRETTEPVDIKVNGKLIAKGELVV 133 Query: 114 VADKYGVRITDIIT 127 V +K+GVRIT+I + Sbjct: 134 VGEKFGVRITEIYS 147 >UniRef50_A1RF65 Flagellar motor switch protein FliN n=8 Tax=Shewanella RepID=A1RF65_SHESW Length = 128 Score = 76.3 bits (186), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 42/105 (40%), Positives = 62/105 (59%), Gaps = 18/105 (17%) Query: 21 EALSEQKSTSSKSAAETVFQQFGGGDVSGTLQDIDLIMDIPVKLTVELGRTRMTIKELLR 80 ++LS+Q + S K FQQ +PV++T+EL M++ EL R Sbjct: 31 KSLSKQDTQSRKLKNNNFFQQ------------------LPVQVTLELASAEMSLGELNR 72 Query: 81 LTQGSVVALDGLAGEPLDILINGYLIAQGEVVVVADKYGVRITDI 125 + +G V+ALD + GEPLDI +NG L+ +GEVV VA +YGVR+ +I Sbjct: 73 MGEGDVIALDRMVGEPLDIRVNGALLGRGEVVEVAGRYGVRLLEI 117 >UniRef50_A6F9R7 Flagellar motor switch protein n=1 Tax=Moritella sp. PE36 RepID=A6F9R7_9GAMM Length = 122 Score = 75.5 bits (184), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 33/75 (44%), Positives = 54/75 (72%) Query: 52 QDIDLIMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQGEV 111 +D+ +IP+ +T+E+ T++ I +L+ L+ G+V+ LD LA EPLD+ +NG L+A EV Sbjct: 39 KDLSFFHNIPIDVTLEVASTKLVIGDLMMLSSGAVIELDKLADEPLDLKVNGQLLATAEV 98 Query: 112 VVVADKYGVRITDII 126 VVV KYGV++ D++ Sbjct: 99 VVVNGKYGVKLIDVV 113 >UniRef50_B6QZA8 Flagellar motor switch protein n=1 Tax=Pseudovibrio sp. JE062 RepID=B6QZA8_9RHOB Length = 111 Score = 75.1 bits (183), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 39/84 (46%), Positives = 56/84 (66%), Gaps = 1/84 (1%) Query: 43 GGGDVSGTLQDIDLIMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILIN 102 GGG V +D++ + D+PV+L LG T+M + +LL L G V+ LD GE +D+ +N Sbjct: 25 GGGGVKAA-EDLEAVFDVPVQLAAVLGHTKMKVSDLLHLDTGIVMELDRKVGEAIDVYVN 83 Query: 103 GYLIAQGEVVVVADKYGVRITDII 126 LIA+GEVV+V DK GV +T+II Sbjct: 84 NRLIARGEVVLVEDKLGVTMTEII 107 >UniRef50_A5P6I8 Flagellar motor switch protein n=1 Tax=Erythrobacter sp. SD-21 RepID=A5P6I8_9SPHN Length = 96 Score = 74.3 bits (181), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 35/74 (47%), Positives = 53/74 (71%) Query: 56 LIMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQGEVVVVA 115 LI DI V+LTVELGR M ++++L L + SV+ LD L EPLD+ +NG LIA+GEV+ Sbjct: 10 LIQDIDVRLTVELGRKSMRLRDVLALGESSVIELDRLTDEPLDMFVNGKLIARGEVIAQG 69 Query: 116 DKYGVRITDIITPS 129 +++ +R+ +I+ S Sbjct: 70 NRFAIRVLEIVGAS 83 >UniRef50_Q01PP4 Flagellar motor switch protein FliN n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q01PP4_SOLUE Length = 282 Score = 74.3 bits (181), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 33/82 (40%), Positives = 59/82 (71%) Query: 54 IDLIMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQGEVVV 113 ++L++D+ + +++ G+T + +K++L+LT GS+V L+ EP+++L+N LIA+GEVVV Sbjct: 200 MELLLDVELPVSISFGKTEILMKDVLKLTTGSIVELNRGVNEPVEVLVNHCLIARGEVVV 259 Query: 114 VADKYGVRITDIITPSERMRRL 135 V YGVRI I+ +R+R + Sbjct: 260 VEGNYGVRIQQIVNRQDRLRSI 281 >UniRef50_Q2WA21 Flagellar motor switch/type III secretory pathway protein n=6 Tax=Rhodospirillales RepID=Q2WA21_MAGSA Length = 108 Score = 74.3 bits (181), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 39/90 (43%), Positives = 62/90 (68%), Gaps = 3/90 (3%) Query: 40 QQFGGGDVSG---TLQDIDLIMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEP 96 ++ G GDV + +D++ + DIPV+++ LG+ M + +LL+L +G+VV LD GE Sbjct: 14 EEQGRGDVPDMPRSARDLEAVYDIPVQVSAVLGKATMQVNQLLKLGRGAVVELDRKVGEA 73 Query: 97 LDILINGYLIAQGEVVVVADKYGVRITDII 126 +DI +N L+A+GEVVVV D+ GV +T+II Sbjct: 74 IDIYVNNRLVARGEVVVVEDRLGVTMTEII 103 >UniRef50_B2USQ1 Flagellar motor switch protein FliY n=14 Tax=Helicobacter pylori RepID=B2USQ1_HELPS Length = 288 Score = 73.9 bits (180), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 33/87 (37%), Positives = 62/87 (71%) Query: 51 LQDIDLIMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQGE 110 +++I +++D+ + + V +G+ +M +K+++ + GSVV LD L +PL+IL++ +IA+GE Sbjct: 202 IRNISMLLDVKLNVKVRIGQKKMILKDVVSMDIGSVVELDQLVNDPLEILVDDKVIAKGE 261 Query: 111 VVVVADKYGVRITDIITPSERMRRLSR 137 VV+V +G++ITDI T ER+ +L Sbjct: 262 VVIVDGNFGIQITDIGTKKERLEQLKH 288 >UniRef50_B1I5E1 Surface presentation of antigens (SPOA) protein n=1 Tax=Candidatus Desulforudis audaxviator MP104C RepID=B1I5E1_DESAP Length = 127 Score = 73.9 bits (180), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 38/110 (34%), Positives = 64/110 (58%) Query: 19 WAEALSEQKSTSSKSAAETVFQQFGGGDVSGTLQDIDLIMDIPVKLTVELGRTRMTIKEL 78 + L + + K F+Q G + G ++ + D+ V ++ ELG+T MT++E Sbjct: 9 FLSGLDREPGPTVKKVQFPRFEQAGTPGMPGVRISLEYLDDVEVDVSAELGQTAMTVREF 68 Query: 79 LRLTQGSVVALDGLAGEPLDILINGYLIAQGEVVVVADKYGVRITDIITP 128 L L +GSV+ LD AGE +D+++NG +A+GEV+V+ D + +RI I P Sbjct: 69 LSLHEGSVIGLDRAAGETIDVVVNGVKLARGEVLVINDLFVLRIHSIAHP 118 >UniRef50_Q17WT1 Flagellar motor switch protein n=8 Tax=Campylobacterales RepID=Q17WT1_HELAH Length = 283 Score = 73.6 bits (179), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 33/85 (38%), Positives = 62/85 (72%) Query: 51 LQDIDLIMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQGE 110 +++I +++D+ + + V +G+ +M +K+++ + GSVV LD L +PL+IL++ +IA+GE Sbjct: 197 IRNISMLLDVKLNVKVRIGQKKMILKDVVSMDIGSVVELDQLVNDPLEILVDDKVIAKGE 256 Query: 111 VVVVADKYGVRITDIITPSERMRRL 135 VV+V +G++ITDI T ER+ +L Sbjct: 257 VVIVDGNFGIQITDIGTKKERLEQL 281 >UniRef50_A4THZ3 Flagellar switch protein n=26 Tax=Enterobacteriaceae RepID=A4THZ3_YERPP Length = 137 Score = 73.6 bits (179), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 34/66 (51%), Positives = 46/66 (69%) Query: 60 IPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQGEVVVVADKYG 119 IPV LT+E+ + + ELL + SV+ LD LAGEPLDI +NG + Q EVVV+ +KYG Sbjct: 62 IPVTLTLEVASVEIPLSELLTVNNDSVIELDKLAGEPLDIRVNGIMFGQAEVVVINEKYG 121 Query: 120 VRITDI 125 +RI +I Sbjct: 122 LRIINI 127 >UniRef50_A7K1M2 Flagellar motor switch protein FliN n=17 Tax=Vibrionaceae RepID=A7K1M2_VIBSE Length = 123 Score = 73.2 bits (178), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 41/113 (36%), Positives = 63/113 (55%), Gaps = 10/113 (8%) Query: 23 LSEQKSTSSKSAAETVFQQFGGGDVSG--TLQ--------DIDLIMDIPVKLTVELGRTR 72 +SE T++ A E F F D TLQ D+ IPV +T+E+ Sbjct: 1 MSEAPETNAFDAEELNFDDFQLEDFEAESTLQQEPATAERDLSFFKSIPVTVTLEVASKE 60 Query: 73 MTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQGEVVVVADKYGVRITDI 125 + + +L++ +G+V+ L+ L GEPLD+ +NG L+ EVVVV DKYG+R+ D+ Sbjct: 61 IPLGDLMKAGEGTVIELEKLNGEPLDVKVNGSLMGHAEVVVVNDKYGLRLIDV 113 >UniRef50_C0GJF0 CheC, inhibitor of MCP methylation / FliN fusion protein n=1 Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GJF0_9FIRM Length = 541 Score = 73.2 bits (178), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 36/73 (49%), Positives = 53/73 (72%) Query: 54 IDLIMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQGEVVV 113 +DLI DIPV++T LGR ++ +KEL+ GSVV L A P+DIL NG L+A+GEVV Sbjct: 463 LDLIRDIPVEITGLLGRRKLPLKELMAAKAGSVVELSCPADAPVDILANGKLVARGEVVH 522 Query: 114 VADKYGVRITDII 126 +++G++IT+I+ Sbjct: 523 YNERFGIKITEIM 535 >UniRef50_Q0EZ61 Flagellar protein n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0EZ61_9PROT Length = 98 Score = 72.8 bits (177), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 34/84 (40%), Positives = 56/84 (66%) Query: 53 DIDLIMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQGEVV 112 +++ IM +P++++VELGR ++ + + RL +G V+ ++ A + IL NG + A+GEVV Sbjct: 15 NLEAIMHVPLEISVELGRIKLPLHTIARLNRGMVIEMNKEANAEVQILANGSIFAKGEVV 74 Query: 113 VVADKYGVRITDIITPSERMRRLS 136 DK GVRIT+I+ S R+ LS Sbjct: 75 STGDKLGVRITEIVPASARISSLS 98 >UniRef50_A7GZX6 Iron chelatin ABC transporter, substrate binding protein n=20 Tax=Campylobacter RepID=A7GZX6_CAMC5 Length = 286 Score = 72.8 bits (177), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 35/85 (41%), Positives = 61/85 (71%) Query: 51 LQDIDLIMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQGE 110 +++I+LIMD+ + + V +G RM +K++L + GSV+ L+ LA +PL+ILI +IA GE Sbjct: 201 MRNINLIMDVRLPIRVRIGSKRMLLKDVLSMDIGSVIELNQLANDPLEILIGDKVIALGE 260 Query: 111 VVVVADKYGVRITDIITPSERMRRL 135 VV++ +G++IT I + ER+++L Sbjct: 261 VVIIDGNFGIQITQIGSKRERLQQL 285 >UniRef50_Q1GNY9 Flagellar motor switch FliN n=2 Tax=Sphingomonadaceae RepID=Q1GNY9_SPHAL Length = 111 Score = 72.4 bits (176), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 34/85 (40%), Positives = 57/85 (67%) Query: 53 DIDLIMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQGEVV 112 + DL+ + ++++VE+G T MT+ ELL L +GSV+ LD A + LDI NG LIA+GE+V Sbjct: 25 NFDLLAGVSLRVSVEVGSTSMTLAELLALGEGSVIELDRAATDLLDIYANGTLIAKGEIV 84 Query: 113 VVADKYGVRITDIITPSERMRRLSR 137 V +YG+++ +++ P+ + R Sbjct: 85 SVDGRYGIQVAEVVAPARGLEGFER 109 >UniRef50_B1ZL53 Flagellar motor switch protein FliN n=6 Tax=Rhizobiales RepID=B1ZL53_METPB Length = 108 Score = 72.0 bits (175), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 33/81 (40%), Positives = 59/81 (72%), Gaps = 3/81 (3%) Query: 52 QDIDLIMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQGEV 111 +++D I+ IPV + V LG M + +L++L +G+VV LD GEP+D+++NG +IA+GE+ Sbjct: 22 RNLDSILRIPVLMQVVLGSATMPVADLMKLGRGAVVPLDHRVGEPVDVMVNGRVIARGEI 81 Query: 112 VVVAD---KYGVRITDIITPS 129 V+V + ++GV +T+++ PS Sbjct: 82 VIVEEDNSRFGVSLTEVVGPS 102 >UniRef50_Q03593 Flagellar motor switch protein fliN n=21 Tax=Alphaproteobacteria RepID=FLIN_CAUCR Length = 110 Score = 72.0 bits (175), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 35/77 (45%), Positives = 54/77 (70%) Query: 50 TLQDIDLIMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQG 109 T D+ + D+PV ++ LGR M++ +LL+L QGS++ LD GE +DI +N L+A+G Sbjct: 28 TAADLAPVFDVPVNISAVLGRANMSVAQLLQLGQGSILELDRKVGEAIDIYVNNRLVARG 87 Query: 110 EVVVVADKYGVRITDII 126 EVVVV ++ GV +T+II Sbjct: 88 EVVVVDERLGVTMTEII 104 >UniRef50_Q11LL6 Flagellar motor switch protein FliN n=3 Tax=Phyllobacteriaceae RepID=Q11LL6_MESSB Length = 121 Score = 72.0 bits (175), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 33/73 (45%), Positives = 54/73 (73%), Gaps = 3/73 (4%) Query: 56 LIMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQGEVVVVA 115 ++DIPV+L + LG MT+ EL+ L +GS V+LD GEP++I++NG LIA+GE+ ++ Sbjct: 42 FLVDIPVELQIVLGSAEMTVSELMALQRGSTVSLDRRIGEPVEIMVNGRLIARGEITILE 101 Query: 116 D---KYGVRITDI 125 + ++GVR+T+I Sbjct: 102 NDPSRFGVRLTEI 114 >UniRef50_A6DBQ2 Flagellar motor switch protein n=1 Tax=Caminibacter mediatlanticus TB-2 RepID=A6DBQ2_9PROT Length = 269 Score = 71.6 bits (174), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 33/84 (39%), Positives = 58/84 (69%) Query: 54 IDLIMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQGEVVV 113 +D++MD+ ++L V +G+ M +K+++ + GS+V LD LA EPLDILI I +GEVV+ Sbjct: 185 LDMLMDVKLQLRVRIGKKTMLLKDVISMDIGSIVELDQLANEPLDILIEDKKIGEGEVVI 244 Query: 114 VADKYGVRITDIITPSERMRRLSR 137 V +G++IT I + ++R+ + + Sbjct: 245 VDGNFGIQITSIGSKADRLNSMKK 268 >UniRef50_B9Z4S4 Flagellar motor switch protein FliN n=1 Tax=Lutiella nitroferrum 2002 RepID=B9Z4S4_9NEIS Length = 119 Score = 71.6 bits (174), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 33/66 (50%), Positives = 49/66 (74%) Query: 60 IPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQGEVVVVADKYG 119 IPV LT+E+G +++ +L+ + QGSV+ LD LAGEPLDI +NG +I + EVVV D YG Sbjct: 44 IPVTLTLEVGSADISLADLVNIGQGSVLELDKLAGEPLDIKVNGSVIGRAEVVVAGDNYG 103 Query: 120 VRITDI 125 +R+ ++ Sbjct: 104 LRVVEL 109 >UniRef50_B1ZR34 Flagellar motor switch protein FliN n=3 Tax=Verrucomicrobia RepID=B1ZR34_OPITP Length = 84 Score = 71.2 bits (173), Expect = 8e-12, Method: Compositional matrix adjust. Identities = 31/73 (42%), Positives = 55/73 (75%) Query: 54 IDLIMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQGEVVV 113 +D+++D+ VK+TV+LG ++ ++E+L L+ GSVV L A +P+ + +N L+A GEVVV Sbjct: 6 LDIVLDVKVKVTVQLGSVQLPMREVLELSPGSVVQLTQHASDPVGLFVNDQLVAYGEVVV 65 Query: 114 VADKYGVRITDII 126 V D +G++IT+++ Sbjct: 66 VEDNFGIKITELV 78 >UniRef50_B8EL08 Flagellar motor switch protein FliN n=2 Tax=Beijerinckiaceae RepID=B8EL08_METSB Length = 110 Score = 71.2 bits (173), Expect = 9e-12, Method: Compositional matrix adjust. Identities = 34/80 (42%), Positives = 57/80 (71%), Gaps = 3/80 (3%) Query: 52 QDIDLIMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQGEV 111 ++++ I+ IPV + V LG M + LL+L +G+V+ LD GEP+D+++NG +IA+GE+ Sbjct: 26 RNLETILRIPVVVQVVLGSAVMPVSHLLKLGRGAVIPLDHRVGEPVDVVVNGRIIARGEI 85 Query: 112 VVVAD---KYGVRITDIITP 128 VVV D ++GV +T+I+ P Sbjct: 86 VVVEDDNSRFGVSLTEIVGP 105 >UniRef50_B1LV08 Flagellar motor switch protein FliN n=1 Tax=Methylobacterium radiotolerans JCM 2831 RepID=B1LV08_METRJ Length = 110 Score = 70.9 bits (172), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 34/77 (44%), Positives = 53/77 (68%) Query: 50 TLQDIDLIMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQG 109 T D++ + D+PV ++ LG RM I +LLRL G+V+ LD GE +D+ +N L+A+G Sbjct: 31 TAADLEQLFDVPVMVSAVLGSARMPIGDLLRLAPGAVLELDRKVGEAIDVFVNNRLVARG 90 Query: 110 EVVVVADKYGVRITDII 126 EVV+V D+ GV +T+I+ Sbjct: 91 EVVLVEDRLGVTMTEIV 107 >UniRef50_A1UTV7 Flagellar motor switch protein fliY n=35 Tax=Rhizobiales RepID=A1UTV7_BARBK Length = 139 Score = 70.9 bits (172), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 32/78 (41%), Positives = 56/78 (71%), Gaps = 3/78 (3%) Query: 52 QDIDLIMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQGEV 111 + +L+M IPV++ + LG T M + L+ L +GSV+ L+ G+P+DI++NG +IA+GEV Sbjct: 60 NNTELVMSIPVEVQIVLGSTTMPVANLMNLGRGSVITLNKQIGDPIDIVVNGRIIARGEV 119 Query: 112 VVVAD---KYGVRITDII 126 +V+ D ++GV +T++I Sbjct: 120 IVLEDDSSRFGVSLTEVI 137 >UniRef50_C3XES1 Flagellar motor switch protein FliY n=1 Tax=Helicobacter bilis ATCC 43879 RepID=C3XES1_9HELI Length = 283 Score = 70.9 bits (172), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 34/85 (40%), Positives = 60/85 (70%) Query: 51 LQDIDLIMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQGE 110 +++I +++DI + + V +G+ RM +K+++ + GSVV L+ LA +PL+IL+N +I +GE Sbjct: 197 MRNIGMLLDIGLSVKVRIGQKRMLLKDVISMDIGSVVELNQLASDPLEILVNDKIIGKGE 256 Query: 111 VVVVADKYGVRITDIITPSERMRRL 135 VVVV + ++IT+I T ER+ L Sbjct: 257 VVVVDGNFAIQITEIGTKKERLESL 281 >UniRef50_A8AKJ4 Putative uncharacterized protein n=1 Tax=Citrobacter koseri ATCC BAA-895 RepID=A8AKJ4_CITK8 Length = 132 Score = 70.9 bits (172), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 34/75 (45%), Positives = 50/75 (66%) Query: 51 LQDIDLIMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQGE 110 ++ + L IPV LT+E+ +++ EL+ + SVV LD +AGEPLDI +NG L + E Sbjct: 48 IRKMALFSRIPVTLTLEVASVNISLAELMSVNSDSVVELDKMAGEPLDIKVNGILFGKAE 107 Query: 111 VVVVADKYGVRITDI 125 VVV+ DKYG+RI + Sbjct: 108 VVVLNDKYGLRIIEF 122 >UniRef50_A1T0L0 Surface presentation of antigens (SPOA) protein n=1 Tax=Psychromonas ingrahamii 37 RepID=A1T0L0_PSYIN Length = 120 Score = 70.9 bits (172), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 36/76 (47%), Positives = 49/76 (64%) Query: 52 QDIDLIMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQGEV 111 + + + DIPV +TVE+G +T+KELL + SV+ L G+ LDI +NG L A GEV Sbjct: 41 KSLSFLNDIPVHVTVEVGAKTVTLKELLEIKNDSVLMLTKENGKALDIKVNGKLFAYGEV 100 Query: 112 VVVADKYGVRITDIIT 127 VV YGV+ITDI+ Sbjct: 101 VVANGHYGVKITDIVN 116 >UniRef50_B6R821 Flagellar motor switch protein FliN n=2 Tax=Rhodobacteraceae RepID=B6R821_9RHOB Length = 138 Score = 70.5 bits (171), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 33/78 (42%), Positives = 55/78 (70%), Gaps = 3/78 (3%) Query: 52 QDIDLIMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQGEV 111 +++D ++ IPV + V LG M + LL+L +G+V+ LD GEP+DI++NG +A+GE+ Sbjct: 54 RNLDAVLGIPVDMQVVLGSATMPVASLLKLGRGAVIPLDHRVGEPVDIVVNGRTVARGEI 113 Query: 112 VVVAD---KYGVRITDII 126 VVV D ++GV +T+I+ Sbjct: 114 VVVEDDNSRFGVSLTEIV 131 >UniRef50_O54245 Flagellar motor switch protein fliN n=15 Tax=Rhizobiales RepID=FLIN_RHIME Length = 198 Score = 70.1 bits (170), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 33/81 (40%), Positives = 57/81 (70%), Gaps = 3/81 (3%) Query: 48 SGTLQDIDLIMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIA 107 SG ++DLIMDIP+ + + LG +RM + L+ LT+G+ +ALD GEP++I++NG +I Sbjct: 113 SGMTANMDLIMDIPIDVQIVLGTSRMQVSGLMALTEGATIALDRKIGEPVEIMVNGRVIG 172 Query: 108 QGEVVVV---ADKYGVRITDI 125 +GE+ V+ ++GV++ +I Sbjct: 173 RGEITVLEGDVTRFGVKLLEI 193 >UniRef50_B9JRN7 Flagellar motor switch protein FliN n=2 Tax=Rhizobiales RepID=B9JRN7_AGRVS Length = 220 Score = 70.1 bits (170), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 30/79 (37%), Positives = 58/79 (73%), Gaps = 3/79 (3%) Query: 52 QDIDLIMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQGEV 111 ++DLIMDIP+ + + LG +RM + L+ L +G+++ALD GEP++I++NG IA+GE+ Sbjct: 138 SNLDLIMDIPIDVQIVLGSSRMPVSGLMNLEEGAIIALDKKIGEPVEIMVNGRRIARGEI 197 Query: 112 VVVAD---KYGVRITDIIT 127 V+ + ++GV++ ++++ Sbjct: 198 TVLENDDTRFGVKLIEVMS 216 >UniRef50_B9L5V0 Flagellar protein FliY n=1 Tax=Nautilia profundicola AmH RepID=B9L5V0_NAUPA Length = 270 Score = 70.1 bits (170), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 40/114 (35%), Positives = 69/114 (60%), Gaps = 11/114 (9%) Query: 24 SEQKSTSSKSAAETVFQQFGGGDVSGTLQDIDLIMDIPVKLTVELGRTRMTIKELLRLTQ 83 SE ST SK+ ++ G ++++++++DI ++L V +G M +K+++ + Sbjct: 168 SEGSSTPSKAV-----------ELKGEMKNLEMLLDIKLQLRVRIGSKIMLLKDVIGMDI 216 Query: 84 GSVVALDGLAGEPLDILINGYLIAQGEVVVVADKYGVRITDIITPSERMRRLSR 137 GS+V L+ LA EPLDILI I +GEVV+V +G++IT I + ER+ L + Sbjct: 217 GSIVELNQLAKEPLDILIEDKKIGEGEVVIVDGNFGIQITSIGSREERLNSLKK 270 >UniRef50_Q18D12 Putative flagellar motor switch protein n=3 Tax=Clostridium difficile RepID=Q18D12_CLOD6 Length = 124 Score = 70.1 bits (170), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 32/79 (40%), Positives = 60/79 (75%) Query: 57 IMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQGEVVVVAD 116 I+D+ ++L+V +GRT+MT++++L L +GS++ LD LA + ++ILI+ ++A G+VVVV Sbjct: 45 ILDLKLELSVVIGRTKMTLRDILNLHKGSLIELDTLADQDVEILIDNKVLAYGKVVVVDL 104 Query: 117 KYGVRITDIITPSERMRRL 135 +GV+IT I++ + ++ L Sbjct: 105 NFGVKITSIVSEEDMVKSL 123 >UniRef50_Q57259 Flagellar motor switch protein fliN n=2 Tax=Rhizobium/Agrobacterium group RepID=FLIN_AGRT5 Length = 179 Score = 69.7 bits (169), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 31/83 (37%), Positives = 60/83 (72%), Gaps = 3/83 (3%) Query: 48 SGTLQDIDLIMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIA 107 SG +++++IMDIP+ + + LG +RM + L+ L +G+ +ALD GEP++I++NG IA Sbjct: 93 SGLSENMEMIMDIPIDVQIVLGTSRMLVSGLMSLEEGATIALDRKIGEPVEIMVNGRRIA 152 Query: 108 QGEVVVVAD---KYGVRITDIIT 127 +GE+ V+ D ++GV++ ++++ Sbjct: 153 RGEITVLEDDDTRFGVKLIEVLS 175 >UniRef50_B6IW97 Flagellar motor switch protein FliN n=1 Tax=Rhodospirillum centenum SW RepID=B6IW97_RHOCS Length = 105 Score = 69.7 bits (169), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 35/86 (40%), Positives = 57/86 (66%) Query: 48 SGTLQDIDLIMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIA 107 SG + + I+ +PV+++V LGR RM I +LLRL VV L+ + GEP+D+ +N L+A Sbjct: 11 SGETPERNSILSVPVQVSVRLGRRRMRISQLLRLGPSDVVDLERMVGEPVDLFVNDRLVA 70 Query: 108 QGEVVVVADKYGVRITDIITPSERMR 133 +GE+VVV + G+ I +++ + R R Sbjct: 71 RGELVVVDGRLGLTIVELMPQASRGR 96 >UniRef50_C5JB71 Flagellar motor switch/type III secretory pathway protein n=1 Tax=uncultured bacterium RepID=C5JB71_9BACT Length = 117 Score = 69.3 bits (168), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 34/78 (43%), Positives = 55/78 (70%) Query: 54 IDLIMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQGEVVV 113 ++ + ++PV++T LG + + ++L+L +G+VV LD + GEP+DI N LIA+GEVVV Sbjct: 40 MEAVYEVPVEVTAVLGTASLQVSQILKLGRGAVVELDRIVGEPVDINANNRLIARGEVVV 99 Query: 114 VADKYGVRITDIITPSER 131 V D+ ++ITDII + R Sbjct: 100 VEDRLAIQITDIIRSNIR 117 >UniRef50_C9PEF6 Flagellar motor switch protein FliN n=1 Tax=Vibrio furnissii CIP 102972 RepID=C9PEF6_VIBFU Length = 128 Score = 69.3 bits (168), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 32/80 (40%), Positives = 52/80 (65%) Query: 48 SGTLQDIDLIMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIA 107 +G ++ LI DIPV++TVE+ R R+ +KE++ + SV+ LD GEP+DI ING L Sbjct: 44 TGNKSNMGLIRDIPVEVTVEVSRRRLPLKEIMSIEPASVIMLDKQEGEPVDIKINGVLFG 103 Query: 108 QGEVVVVADKYGVRITDIIT 127 G +++ KYGV++ ++ Sbjct: 104 TGNIIIQDGKYGVQVLALVN 123 >UniRef50_A9HHD1 Flagellar motor switch protein FliN n=2 Tax=Rhodospirillales RepID=A9HHD1_GLUDA Length = 125 Score = 68.9 bits (167), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 46/114 (40%), Positives = 67/114 (58%), Gaps = 5/114 (4%) Query: 15 MDDLWAEALSEQKSTSSKSAAETVFQQFGGGDVSGTLQDIDLIMDIPVKLTVELGRTRMT 74 ++D + A S + SA +Q G D SG ++ + DIPVK+T +G M Sbjct: 10 LEDFSSAAPSPAGAEPDGSATAAGRKQKNG-DGSGQME---AVYDIPVKITAVIGSATMP 65 Query: 75 IKELLRLTQGSVVALDGLAGEPLDILINGYLIAQGEVVVVADKY-GVRITDIIT 127 + +LL+L +G+VV LD GE +DI N LIA+GEVVVV D + GV +T+II+ Sbjct: 66 VSQLLKLGRGAVVELDRKLGEAVDIYANNRLIARGEVVVVDDNHIGVTMTEIIS 119 >UniRef50_A5FYJ9 Flagellar motor switch protein FliN n=17 Tax=Alphaproteobacteria RepID=A5FYJ9_ACICJ Length = 132 Score = 68.9 bits (167), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 33/76 (43%), Positives = 57/76 (75%), Gaps = 1/76 (1%) Query: 52 QDIDLIMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQGEV 111 +D++ + D+PV ++ LGR+ M + +LL+L +G+VV LD AG+P+DI +N LIA+GEV Sbjct: 51 RDLEAVYDVPVLVSAVLGRSTMQVSQLLKLGRGAVVELDRKAGDPIDIFVNNRLIARGEV 110 Query: 112 VVVAD-KYGVRITDII 126 V++ + K G+ +T+I+ Sbjct: 111 VMLDETKLGITMTEIV 126 >UniRef50_A5D0I4 Flagellar motor switch/type III secretory pathway protein n=1 Tax=Pelotomaculum thermopropionicum SI RepID=A5D0I4_PELTS Length = 126 Score = 68.9 bits (167), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 32/67 (47%), Positives = 50/67 (74%) Query: 59 DIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQGEVVVVADKY 118 D+ ++++VELG+T M ++E+L L QGSV+ LD GE +++++N A+GEVVV+ D + Sbjct: 47 DVQIEISVELGQTVMKVREVLGLEQGSVIRLDKAIGEAVEVVLNEQRFARGEVVVINDSF 106 Query: 119 GVRITDI 125 GVRIT I Sbjct: 107 GVRITSI 113 >UniRef50_D1B0L6 Flagellar motor switch protein FliN n=1 Tax=Sulfurospirillum deleyianum DSM 6946 RepID=D1B0L6_SULD5 Length = 286 Score = 68.6 bits (166), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 35/85 (41%), Positives = 58/85 (68%) Query: 51 LQDIDLIMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQGE 110 + +I+LI D+ + + V +G +M +K++L + GSV+ LD LA +PL+IL+ +IA GE Sbjct: 201 ISNIELIKDVRLPIRVRIGSKKMLLKDVLSMDIGSVIELDQLANDPLEILVGDKVIAMGE 260 Query: 111 VVVVADKYGVRITDIITPSERMRRL 135 VV+V +GV+I +I T ER+ +L Sbjct: 261 VVIVDGNFGVQIGEIGTKRERLEKL 285 >UniRef50_Q67MU5 Putative uncharacterized protein n=1 Tax=Symbiobacterium thermophilum RepID=Q67MU5_SYMTH Length = 227 Score = 68.2 bits (165), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 30/74 (40%), Positives = 50/74 (67%) Query: 56 LIMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQGEVVVVA 115 +++DI + L+VELG+ R+ + E+L + GSV+ LD LA EPL++ +NG EV+ + Sbjct: 149 VLLDIELTLSVELGKARLPLGEILSMGPGSVITLDRLASEPLNVKVNGLPAMTAEVIAIG 208 Query: 116 DKYGVRITDIITPS 129 +KYG+RI + P+ Sbjct: 209 EKYGIRIVESQLPN 222 >UniRef50_C8W1G7 Surface presentation of antigens (SPOA) protein n=1 Tax=Desulfotomaculum acetoxidans DSM 771 RepID=C8W1G7_DESAS Length = 128 Score = 67.8 bits (164), Expect = 9e-11, Method: Compositional matrix adjust. Identities = 33/77 (42%), Positives = 49/77 (63%) Query: 53 DIDLIMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQGEVV 112 I I D+PV +T ELG +T++E+L L+ G ++ LD LAGE + + IN +GEV+ Sbjct: 40 SIKHIEDVPVIVTAELGGAALTVREVLNLSPGMLIKLDVLAGELVTMSINNQKFGRGEVM 99 Query: 113 VVADKYGVRITDIITPS 129 V+ D YG+RIT + P Sbjct: 100 VINDNYGIRITSVFKPH 116 >UniRef50_A8RWA3 Putative uncharacterized protein n=3 Tax=Clostridiales RepID=A8RWA3_9CLOT Length = 320 Score = 67.8 bits (164), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 38/134 (28%), Positives = 71/134 (52%), Gaps = 6/134 (4%) Query: 1 MSDMNNPADDNNGAMDDLWAEALSEQKSTSSKSAAETVFQQFGGGDVSGTLQDI----DL 56 M+DM P + G + A + + + + E F +F + + I Sbjct: 189 MADM--PCQETGGQTPGMPAAGMQTAEHKEAIAVQEVSFPEFKYTPIVYAKEQIGEEKKK 246 Query: 57 IMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQGEVVVVAD 116 ++DI + ++V LG T ++K++L L +G ++ LD AG P D+++NG LI +G+V+V D Sbjct: 247 LLDITLDVSVRLGSTVCSVKDILSLKEGQLLVLDKQAGSPADVVVNGELIGRGDVLVTGD 306 Query: 117 KYGVRITDIITPSE 130 ++G RI +++ E Sbjct: 307 RFGARIIEVVGKRE 320 >UniRef50_Q07SI0 Flagellar motor switch protein FliN n=7 Tax=Alphaproteobacteria RepID=Q07SI0_RHOP5 Length = 132 Score = 67.4 bits (163), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 38/128 (29%), Positives = 74/128 (57%), Gaps = 14/128 (10%) Query: 2 SDMNNPADDNNGAMDDLWAEALSEQKSTSSKSAAETVFQQFGGGDVSGTLQDIDLIMDIP 61 +D++N A ++ A + + ++++A ET L +++ I+ IP Sbjct: 7 TDLSNAAAEHASEPFKPEAASFGKLADLAARAAEET-----------SRLTNLEPILRIP 55 Query: 62 VKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQGEVVVVAD---KY 118 V + V LG M + +L++L +G+V+ LD GEP+++++NG ++A+G VVVV D ++ Sbjct: 56 VTVQVLLGSATMPVADLMKLGRGAVIPLDHRVGEPVEVVVNGRIVARGAVVVVEDENSRF 115 Query: 119 GVRITDII 126 GV +T+I+ Sbjct: 116 GVSLTEIV 123 >UniRef50_C6XFK8 Putative flagellar motor switch protein n=1 Tax=Candidatus Liberibacter asiaticus str. psy62 RepID=C6XFK8_LIBAP Length = 147 Score = 65.9 bits (159), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 32/78 (41%), Positives = 50/78 (64%), Gaps = 3/78 (3%) Query: 53 DIDLIMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQGEVV 112 + DLIM+IPVK+ + LG M I L+ L++G V+ LD GE +DI IN IA+GE+ Sbjct: 68 NFDLIMNIPVKMQIILGSCCMQISNLVNLSKGDVITLDKRVGESVDITINNQKIAKGEIT 127 Query: 113 VVAD---KYGVRITDIIT 127 ++ + +GVR+ +I+ Sbjct: 128 IMEEDDTHFGVRVIEILN 145 >UniRef50_C0GJH0 Surface presentation of antigens (SPOA) protein n=1 Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GJH0_9FIRM Length = 150 Score = 65.9 bits (159), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 30/87 (34%), Positives = 51/87 (58%) Query: 39 FQQFGGGDVSGTLQDIDLIMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLD 98 F +F + ++ +PV L +ELG +T++E+L L + S++ LD LAGE Sbjct: 53 FPEFVQAPQGAKERGVNFFESVPVTLDLELGAATLTVREILALQKDSIIRLDKLAGENAA 112 Query: 99 ILINGYLIAQGEVVVVADKYGVRITDI 125 + +NG +A GEVVV+ D +G R+ ++ Sbjct: 113 LCVNGKPLASGEVVVINDNFGFRVAEV 139 >UniRef50_A5KY22 Flagellar motor switch protein n=2 Tax=Vibrionales RepID=A5KY22_9GAMM Length = 127 Score = 65.9 bits (159), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 36/81 (44%), Positives = 50/81 (61%), Gaps = 1/81 (1%) Query: 51 LQDIDLIMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQGE 110 + +I L+ IPV +TVE+ R + + ELL L GSVV L+ G+P+DI ING GE Sbjct: 47 VSNISLLKSIPVDITVEVARKTLILDELLNLKAGSVVMLEKHEGDPVDIKINGTAFGTGE 106 Query: 111 VVVVADKYGVRITDII-TPSE 130 +V +YGVR+ II PS+ Sbjct: 107 IVSKNGQYGVRLLSIIKKPSK 127 >UniRef50_A3NFV2 Flagellar motor switch/type III secretory pathway protein n=9 Tax=Betaproteobacteria RepID=A3NFV2_BURP6 Length = 115 Score = 65.5 bits (158), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 30/70 (42%), Positives = 49/70 (70%) Query: 56 LIMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQGEVVVVA 115 L+ IPV+LT+E+G +++ EL+ + +G+V+ LD LAGEPL + +NG + EVVV Sbjct: 38 LLAKIPVQLTLEVGTATVSLAELMNIDEGTVLELDRLAGEPLLVKVNGTTVGHAEVVVSG 97 Query: 116 DKYGVRITDI 125 + YG++I D+ Sbjct: 98 ENYGLKIIDL 107 >UniRef50_Q5DY32 Lateral flagellar export/assembly protein (FliN-like) n=9 Tax=Enterobacteriaceae RepID=Q5DY32_ECOLX Length = 123 Score = 65.5 bits (158), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 32/72 (44%), Positives = 48/72 (66%) Query: 56 LIMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQGEVVVVA 115 L+ IPV LT+E+ + + +LL + +V+ LD LAGEPLDI +N L+ + EVVVV Sbjct: 44 LLKRIPVTLTLEVSSVEIMLADLLNIDDDTVIELDKLAGEPLDIKVNNILLGKAEVVVVN 103 Query: 116 DKYGVRITDIIT 127 +KYG+R+ + T Sbjct: 104 EKYGLRVLEFNT 115 >UniRef50_A8EW52 Flagellar motor switch protein FliY n=1 Tax=Arcobacter butzleri RM4018 RepID=A8EW52_ARCB4 Length = 289 Score = 65.1 bits (157), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 31/80 (38%), Positives = 55/80 (68%) Query: 47 VSGTLQDIDLIMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLI 106 V+ T ++++L+ ++ +KL+V LG + +K++LR G ++ L+ + EPL+ILING I Sbjct: 199 VTPTSKNLELLYNVKLKLSVRLGTKIVLLKDILRWDVGEIIELEQMVNEPLEILINGVKI 258 Query: 107 AQGEVVVVADKYGVRITDII 126 +GE V+V K+G++I II Sbjct: 259 GEGEAVIVEGKFGLKIKRII 278 >UniRef50_Q8KA38 Flagellar motor switch protein fliN n=1 Tax=Buchnera aphidicola (Schizaphis graminum) RepID=FLIN_BUCAP Length = 133 Score = 65.1 bits (157), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 29/70 (41%), Positives = 47/70 (67%) Query: 56 LIMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQGEVVVVA 115 ++ DI + +TVELG++++ IK+LL ++GS++ L +PL + N LIA GE+V Sbjct: 53 ILFDIEMNITVELGKSKVKIKDLLNFSKGSMLFLQRKKEDPLKVFANNKLIALGEIVFSN 112 Query: 116 DKYGVRITDI 125 +KYG+RI I Sbjct: 113 NKYGIRIISI 122 >UniRef50_A3SFT8 Surface presentation of antigens (SPOA) protein n=2 Tax=Sulfitobacter RepID=A3SFT8_9RHOB Length = 114 Score = 64.3 bits (155), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 34/76 (44%), Positives = 52/76 (68%), Gaps = 1/76 (1%) Query: 52 QDIDLIMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQGEV 111 + +D I + + + V LGR+RM I ELL LT+GSV+ LD GEP+DI+IN ++A+G++ Sbjct: 32 KSLDAIFGVKLDVRVVLGRSRMPISELLNLTKGSVIELDRRVGEPVDIMINDRMVARGDL 91 Query: 112 V-VVADKYGVRITDII 126 V V D GV + +I+ Sbjct: 92 VRVQGDSLGVALREIV 107 >UniRef50_B6IQ95 Flagellar motor switch protein FliN n=1 Tax=Rhodospirillum centenum SW RepID=B6IQ95_RHOCS Length = 119 Score = 63.5 bits (153), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 33/71 (46%), Positives = 51/71 (71%), Gaps = 1/71 (1%) Query: 57 IMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQGEVVVVAD 116 I ++PV + V LGRT M + +LL+L +G+VV L+ GE +D+ +N LIA+GEVV+V D Sbjct: 42 IFNVPVNVQVVLGRTTMPVSQLLKLGRGAVVELNRKVGEAVDVFVNDRLIARGEVVIVDD 101 Query: 117 -KYGVRITDII 126 + GV +T+I+ Sbjct: 102 GRLGVTMTEIV 112 >UniRef50_Q2CGH8 Flagellar motor switch protein FliN n=3 Tax=Rhodobacteraceae RepID=Q2CGH8_9RHOB Length = 132 Score = 63.5 bits (153), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 33/93 (35%), Positives = 66/93 (70%), Gaps = 2/93 (2%) Query: 36 ETVFQQFGGGDVSGTL-QDIDLIMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAG 94 +TV + G V+G + I+ ++++ +++ + LGR+RM I +LL+L++GS++ LD G Sbjct: 33 QTVLENMVGEQVNGDGGRSIEAMLNVGLEVNIVLGRSRMPISQLLKLSRGSIIELDKRIG 92 Query: 95 EPLDILINGYLIAQGEVVVVAD-KYGVRITDII 126 EP+D++++ L+A+G++V V D + GV +T+I+ Sbjct: 93 EPVDMIVSDRLVARGDLVRVGDNRVGVTLTEIV 125 >UniRef50_Q0C2D2 Flagellar motor switch protein FliN n=1 Tax=Hyphomonas neptunium ATCC 15444 RepID=Q0C2D2_HYPNA Length = 89 Score = 62.8 bits (151), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 29/71 (40%), Positives = 52/71 (73%) Query: 56 LIMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQGEVVVVA 115 ++MD+PV++ V LG R+ ++EL+ L+ G +VAL+ EP+DI ++G L+A+G++VV Sbjct: 12 MLMDVPVRVDVVLGEARIPMEELMALSPGEIVALERQTNEPVDIYVSGRLVARGKLVVTD 71 Query: 116 DKYGVRITDII 126 + GV +++II Sbjct: 72 GQLGVTLSEII 82 >UniRef50_C9R9Y4 Surface presentation of antigens (SPOA) protein n=1 Tax=Ammonifex degensii KC4 RepID=C9R9Y4_AMMDK Length = 114 Score = 62.8 bits (151), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 28/77 (36%), Positives = 53/77 (68%) Query: 54 IDLIMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQGEVVV 113 ++L+ + +++T LG +T++ELL L +GSV+ LD +AGE +D+L++G +GEV+V Sbjct: 27 LELLHGVTLEVTALLGEATLTVQELLELREGSVIRLDRVAGEAVDLLLDGQKFGRGEVMV 86 Query: 114 VADKYGVRITDIITPSE 130 + +++ VR+ + P E Sbjct: 87 LNERFVVRVLQVFPPQE 103 >UniRef50_A3WGR5 Flagellar motor switch protein n=1 Tax=Erythrobacter sp. NAP1 RepID=A3WGR5_9SPHN Length = 102 Score = 61.6 bits (148), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 29/68 (42%), Positives = 49/68 (72%) Query: 59 DIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQGEVVVVADKY 118 D+ V+L+VELGRT M +K++L + +GSVV L+ L E LD+ NG ++A+GEV+ ++ Sbjct: 13 DVTVRLSVELGRTEMPLKDVLAIDEGSVVPLNRLTDELLDVTANGRVVARGEVIAQDGRF 72 Query: 119 GVRITDII 126 +RI +++ Sbjct: 73 ALRIVELV 80 >UniRef50_A6Q2N5 Flagellar motor switch protein FliN/FliY n=1 Tax=Nitratiruptor sp. SB155-2 RepID=A6Q2N5_NITSB Length = 83 Score = 61.2 bits (147), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 32/77 (41%), Positives = 50/77 (64%) Query: 49 GTLQDIDLIMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQ 108 G D L+ DI +K++V LG T+ I E+L L +G V+ L+ + +D+++N +A Sbjct: 6 GEQVDFSLLEDISLKMSVRLGSTKKMIIEILSLKEGDVIELERNTEDYIDVMLNEKKMAI 65 Query: 109 GEVVVVADKYGVRITDI 125 GE+VV+ DKYGVRI D+ Sbjct: 66 GEIVVINDKYGVRIVDL 82 >UniRef50_B1K3A4 Flagellar motor switch protein FliN n=1 Tax=Burkholderia cenocepacia MC0-3 RepID=B1K3A4_BURCC Length = 113 Score = 61.2 bits (147), Expect = 9e-09, Method: Compositional matrix adjust. Identities = 31/66 (46%), Positives = 44/66 (66%) Query: 60 IPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQGEVVVVADKYG 119 IPV+LT+E+G + + +LL GS V L+ LAGEPL I +NG + GEVVV + YG Sbjct: 40 IPVRLTLEVGEATVPLADLLSYETGSTVELNRLAGEPLVIKVNGTPVGLGEVVVSGEHYG 99 Query: 120 VRITDI 125 +RI ++ Sbjct: 100 LRIIEL 105 >UniRef50_Q01PQ3 Surface presentation of antigens (SPOA) protein n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q01PQ3_SOLUE Length = 82 Score = 60.8 bits (146), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 31/67 (46%), Positives = 43/67 (64%) Query: 59 DIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQGEVVVVADKY 118 D+PV + VEL R MT +++L+L +G V+ AGE +DI I G L GE+VV+ + Sbjct: 12 DVPVDIEVELDRRIMTTRDVLQLEEGCVIGTSRSAGENIDIYIGGVLCGSGEIVVIENTL 71 Query: 119 GVRITDI 125 GVRITD Sbjct: 72 GVRITDF 78 >UniRef50_A7H064 Flagellar motor switch protein FliN n=8 Tax=Epsilonproteobacteria RepID=A7H064_CAMC5 Length = 105 Score = 60.8 bits (146), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 30/89 (33%), Positives = 49/89 (55%) Query: 49 GTLQDIDLIMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQ 108 G + D +MDI V ELG T ++I ELL+ GSV+ L+ AGE +++ IN + + Sbjct: 14 GLFKSYDELMDISVDFIAELGTTTISINELLKFEAGSVIDLEKPAGESVELYINNRIFGK 73 Query: 109 GEVVVVADKYGVRITDIITPSERMRRLSR 137 GEV+V +RI +I+ ++ + Sbjct: 74 GEVMVYEKNLAIRINEILDSKSVIQYFKK 102 >UniRef50_A4J755 Surface presentation of antigens (SPOA) protein n=1 Tax=Desulfotomaculum reducens MI-1 RepID=A4J755_DESRM Length = 128 Score = 60.5 bits (145), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 30/80 (37%), Positives = 52/80 (65%), Gaps = 1/80 (1%) Query: 57 IMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQGEVVVVAD 116 I D+ V ++ ELG + +E+L L G+V+ ++ AG+ +++ IN AQGE+++V D Sbjct: 49 IEDVKVTISAELGEKILKFREVLNLDVGTVLDMEKSAGDAINVYINDIKAAQGEIIIVND 108 Query: 117 KYGVRITDIITPSERMRRLS 136 K+ VRI I +P +++RR S Sbjct: 109 KFAVRINSITSP-KKLRRES 127 >UniRef50_A3ZT50 Probable flagellar motor switch protein fliN n=1 Tax=Blastopirellula marina DSM 3645 RepID=A3ZT50_9PLAN Length = 309 Score = 60.1 bits (144), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 25/76 (32%), Positives = 47/76 (61%) Query: 57 IMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQGEVVVVAD 116 ++ I +++ V L +M ++E+ L GS++ D E +D+ + + IAQGE V + D Sbjct: 224 LLKIAIEVNVTLASKKMRVREITELGIGSIIQFDKSCEESIDLEVGEHRIAQGEAVKIGD 283 Query: 117 KYGVRITDIITPSERM 132 K+G+R+T+++ P ER Sbjct: 284 KFGMRVTNVLLPEERF 299 >UniRef50_D1R7U0 Putative type III secretion system protein n=1 Tax=Parachlamydia acanthamoebae str. Hall's coccus RepID=D1R7U0_9CHLA Length = 462 Score = 59.7 bits (143), Expect = 2e-08, Method: Composition-based stats. Identities = 26/69 (37%), Positives = 49/69 (71%) Query: 57 IMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQGEVVVVAD 116 I DIP+ +T E+GR +MT+K+L+ L G+++ L+ + +D+++NG +A+GE++ + D Sbjct: 393 IDDIPLVITAEVGRIQMTVKKLVELQPGNLLELNVHPEDGIDLVVNGKRVARGELLSIGD 452 Query: 117 KYGVRITDI 125 GVR+ +I Sbjct: 453 ALGVRVLEI 461 >UniRef50_C7DF35 Flagellar motor switch protein FliN n=1 Tax=Thalassiobium sp. R2A62 RepID=C7DF35_9RHOB Length = 94 Score = 59.3 bits (142), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 29/80 (36%), Positives = 51/80 (63%), Gaps = 4/80 (5%) Query: 59 DIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQGEVVVVAD-- 116 D+P+++T+ +GRT T++ELL L + +++ LD +P+DI + LIA+GE+ + D Sbjct: 15 DVPIEVTISIGRTHPTVRELLDLNENAILVLDKNIQDPVDIFVGDKLIARGELQELEDTN 74 Query: 117 --KYGVRITDIITPSERMRR 134 + VR+T+II P R+ Sbjct: 75 ISQLAVRLTEIIDPPSGSRK 94 >UniRef50_C1SLE0 Flagellar motor switch/type III secretory pathway protein n=1 Tax=Denitrovibrio acetiphilus DSM 12809 RepID=C1SLE0_9BACT Length = 95 Score = 58.9 bits (141), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 25/61 (40%), Positives = 44/61 (72%) Query: 66 VELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQGEVVVVADKYGVRITDI 125 VELGR + ++ELL +G+++ +GEP+D L+NG +A GE++V+ +++ VRIT+I Sbjct: 20 VELGRKMVKVRELLNWEKGTILKFTKTSGEPVDFLVNGKPLALGEIMVLDERFAVRITEI 79 Query: 126 I 126 + Sbjct: 80 L 80 >UniRef50_C1F999 Putative flagellar motor switch protein FliN n=1 Tax=Acidobacterium capsulatum ATCC 51196 RepID=C1F999_ACIC5 Length = 248 Score = 58.9 bits (141), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 32/111 (28%), Positives = 62/111 (55%), Gaps = 3/111 (2%) Query: 23 LSEQKSTSSKSAAETVFQQFG---GGDVSGTLQDIDLIMDIPVKLTVELGRTRMTIKELL 79 LSE+ + + ++AA G + ++DL++DI V ++ G + I+ELL Sbjct: 129 LSEKAAKAPETAARPAPASSGQPSAAASPASAANVDLLLDIEVDASLRFGSRELAIRELL 188 Query: 80 RLTQGSVVALDGLAGEPLDILINGYLIAQGEVVVVADKYGVRITDIITPSE 130 G V+ LD +P+D+++ ++A+GEVV+V +G+R+T++ P + Sbjct: 189 ETGPGDVLELDRHITDPVDLVVGDKIVARGEVVLVNGNFGLRVTEVAEPKK 239 >UniRef50_D1AZW0 Surface presentation of antigens (SPOA) protein n=3 Tax=Campylobacteraceae RepID=D1AZW0_SULD5 Length = 103 Score = 58.5 bits (140), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 28/70 (40%), Positives = 45/70 (64%) Query: 57 IMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQGEVVVVAD 116 ++DI V ELG T +TI+ LL+L +GSV+ L+ AGE +++ IN + +GEV+V Sbjct: 20 LLDISVDFVAELGTTTLTIQRLLKLEKGSVIDLEKPAGESVELYINNKIFGKGEVMVYEK 79 Query: 117 KYGVRITDII 126 +RI +I+ Sbjct: 80 NLAIRINEIL 89 >UniRef50_Q30RD7 Surface presentation of antigens (SPOA) protein n=15 Tax=Epsilonproteobacteria RepID=Q30RD7_SULDN Length = 111 Score = 57.8 bits (138), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 32/115 (27%), Positives = 62/115 (53%), Gaps = 10/115 (8%) Query: 26 QKSTSSKSAAETVF---QQFGGGDVSGTLQDIDLIMDIPVKLTVELGRTRMTIKELLRLT 82 +K + A E +F + D SG ++D+ V+ +LG T +++ E+L+L Sbjct: 2 KKRRHTYGAKEEIFDSESELSWMDYSG-------LLDMEVEFISDLGETELSVGEILQLK 54 Query: 83 QGSVVALDGLAGEPLDILINGYLIAQGEVVVVADKYGVRITDIITPSERMRRLSR 137 +GS++ L AGE ++ +NG ++ +GEV+V +RI +++ S + LS+ Sbjct: 55 KGSIIDLKKPAGESVETYVNGRILGRGEVMVYEKNLAIRINEVLDSSAVLYHLSK 109 >UniRef50_B1TBB1 Surface presentation of antigens (SPOA) protein n=1 Tax=Burkholderia ambifaria MEX-5 RepID=B1TBB1_9BURK Length = 111 Score = 57.8 bits (138), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 28/73 (38%), Positives = 47/73 (64%) Query: 54 IDLIMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQGEVVV 113 +DL+ D+ V L V LG + +KEL+ L GS+V LD + +D+ +N +A+ E+V Sbjct: 36 LDLVGDVIVSLDVHLGSVDLAVKELMTLQSGSLVTLDRQLDDCVDVRLNERTVARAEIVA 95 Query: 114 VADKYGVRITDII 126 V D++G+RI +I+ Sbjct: 96 VDDRFGIRIVEIV 108 >UniRef50_D2LD12 Surface presentation of antigens (SPOA) protein n=1 Tax=Rhodomicrobium vannielii ATCC 17100 RepID=D2LD12_RHOVA Length = 120 Score = 57.0 bits (136), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 35/96 (36%), Positives = 61/96 (63%), Gaps = 7/96 (7%) Query: 34 AAETVFQQFGGGDVSGTLQDIDLIMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLA 93 AA ++ GGD G+L+ + + IP+ L V LG M I ++ +L +G+V+ LD Sbjct: 24 AAASLIGLGKGGD-PGSLERV---LRIPLSLKVLLGSASMPIYQVTKLGRGAVIPLDRKV 79 Query: 94 GEPLDILINGYLIAQGEVVVV---ADKYGVRITDII 126 G+ +D++ING +IA+GE+VV+ ++GV +T++I Sbjct: 80 GDAVDVMINGRIIAKGEIVVLDEEGSRFGVTLTEMI 115 >UniRef50_O67495 Flagellar motor switch protein fliN n=1 Tax=Aquifex aeolicus RepID=FLIN_AQUAE Length = 112 Score = 56.6 bits (135), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 29/68 (42%), Positives = 47/68 (69%) Query: 59 DIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQGEVVVVADKY 118 DIPV++ V +GR T+ ELL + GSV+ +D + +DI +NG LIA+GE+V++ K Sbjct: 41 DIPVEVEVVVGRANKTLGELLAMGIGSVIEIDREPKDLVDIKVNGKLIAKGELVIIDGKI 100 Query: 119 GVRITDII 126 GV+I +++ Sbjct: 101 GVKIKEVV 108 >UniRef50_Q2SEZ2 Flagellar motor switch protein n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SEZ2_HAHCH Length = 111 Score = 56.2 bits (134), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 34/102 (33%), Positives = 61/102 (59%), Gaps = 5/102 (4%) Query: 27 KSTSSKSAAETVF----QQFGGGDVSGTLQDIDLIMDIPVKLTVELGRTRMTIKELLRLT 82 K T+S + E V + G GD + +DL+ ++ V L V LG +T+ EL LT Sbjct: 8 KETNSDAIVEEVILEPMNEGGAGDKLKS-DPLDLVKNVKVTLDVYLGDANLTVAELTALT 66 Query: 83 QGSVVALDGLAGEPLDILINGYLIAQGEVVVVADKYGVRITD 124 SVV ++ +P+++L++G ++A+G++V V D +G++IT+ Sbjct: 67 SESVVKMNKQLNDPIELLLDGKVVARGKLVAVDDVFGIQITE 108 >UniRef50_Q1D9K8 Type III secretion system apparatus protein YscQ/HrcQ n=2 Tax=Cystobacterineae RepID=Q1D9K8_MYXXD Length = 467 Score = 56.2 bits (134), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 26/73 (35%), Positives = 50/73 (68%) Query: 55 DLIMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQGEVVVV 114 DL+ D+P+++ VEL R +T ++++ L G V+ L+ GEP+++ +NG ++A+GE+V + Sbjct: 395 DLLGDVPLQIAVELARVPVTAQQVVGLRTGQVLELNRGPGEPVELSVNGKVVARGELVEL 454 Query: 115 ADKYGVRITDIIT 127 + GVRI + + Sbjct: 455 EGQLGVRIITLAS 467 >UniRef50_Q3ADD4 Flagellar motor switch protein FliN n=1 Tax=Carboxydothermus hydrogenoformans Z-2901 RepID=Q3ADD4_CARHZ Length = 124 Score = 55.8 bits (133), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 28/68 (41%), Positives = 46/68 (67%) Query: 56 LIMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQGEVVVVA 115 L+ +I +++ +G T +T+++LL L +G V+ LD G+ +D+ I+G A GEVVV+ Sbjct: 42 LLNNIKMEIVARMGTTELTVRQLLALKEGDVLELDKSIGDLIDLFIDGRRFAVGEVVVIN 101 Query: 116 DKYGVRIT 123 + YGVRIT Sbjct: 102 EMYGVRIT 109 >UniRef50_Q6MBC5 Putative flagellar motor switch protein (= type III secretion translocase SctQ) n=1 Tax=Candidatus Protochlamydia amoebophila UWE25 RepID=Q6MBC5_PARUW Length = 445 Score = 55.8 bits (133), Expect = 4e-07, Method: Composition-based stats. Identities = 33/115 (28%), Positives = 67/115 (58%), Gaps = 9/115 (7%) Query: 12 NGAMDDLWAEALSEQKSTSSKSA-AETVFQQFGGGDVSGTLQDIDLIMDIPVKLTVELGR 70 N +D++ E S K+ +S+S+ A ++ + G ++ IPV LTVE+GR Sbjct: 337 NFTLDEVTEEEQSSPKNNASQSSPASSITENTKTGLITPN--------QIPVNLTVEVGR 388 Query: 71 TRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQGEVVVVADKYGVRITDI 125 +M++ LL+L G+++ L+ + +D+ ING ++ +GE++ + + GVR+ ++ Sbjct: 389 IQMSMDHLLKLEPGNMLELNIKPEDGVDLTINGKIVGRGELLRIGEVLGVRVLEL 443 >UniRef50_C3KNB2 Type III secretion system translocation protein, RhcQ n=1 Tax=Rhizobium sp. NGR234 RepID=C3KNB2_RHISN Length = 351 Score = 55.5 bits (132), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 22/75 (29%), Positives = 46/75 (61%) Query: 53 DIDLIMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQGEVV 112 +++ + D+P++L E+GR +KE+ R+ +G+V+ P+ IL NG L+ +GE++ Sbjct: 275 ELEPLADLPIELVFEIGRAEFPLKEIARMGEGTVLHASPSLSSPVSILANGRLVGKGELI 334 Query: 113 VVADKYGVRITDIIT 127 + + G+R+ + T Sbjct: 335 RIGEGLGIRVVRLST 349 >UniRef50_Q0C5L8 Putative flagellar motor switch protein FliN n=1 Tax=Hyphomonas neptunium ATCC 15444 RepID=Q0C5L8_HYPNA Length = 99 Score = 54.7 bits (130), Expect = 8e-07, Method: Compositional matrix adjust. Identities = 28/71 (39%), Positives = 47/71 (66%), Gaps = 1/71 (1%) Query: 57 IMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQGEVVVVAD 116 I +PV +TV +G+ R++++E+L L SV+AL +P+D+ I+ LIA+GE+V D Sbjct: 22 IYSVPVTVTVSIGQKRLSVQEILELQPDSVIALSSKVDDPVDLFIDDKLIAKGELVETDD 81 Query: 117 -KYGVRITDII 126 + V+I +II Sbjct: 82 GQIAVKIVEII 92 >UniRef50_Q0ANV1 Surface presentation of antigens (SPOA) protein n=3 Tax=Alphaproteobacteria RepID=Q0ANV1_MARMM Length = 99 Score = 54.7 bits (130), Expect = 9e-07, Method: Compositional matrix adjust. Identities = 27/71 (38%), Positives = 47/71 (66%) Query: 53 DIDLIMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQGEVV 112 D+ I + V+++V LGR++M I++ LR+ +G+V+ LD + + IL N + IA+G+VV Sbjct: 17 DVSQISSVEVEISVLLGRSKMPIQQFLRMGRGAVIPLDSGEDDQVWILANNHPIARGDVV 76 Query: 113 VVADKYGVRIT 123 + D+ V IT Sbjct: 77 IQGDRIAVSIT 87 >UniRef50_UPI0001AF390C type III secretion component, putative n=2 Tax=Pseudomonas syringae group RepID=UPI0001AF390C Length = 353 Score = 54.3 bits (129), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 23/64 (35%), Positives = 42/64 (65%) Query: 59 DIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQGEVVVVADKY 118 D+P+ L +LG +T+ +L + GS++ L GLA + +D+++NG + +GE+V + D Sbjct: 284 DLPLTLVCQLGSVELTLAQLREMAPGSLLPLAGLAHDEVDLMVNGRRVGRGELVTIGDGL 343 Query: 119 GVRI 122 GVR+ Sbjct: 344 GVRL 347 >UniRef50_Q2RPI0 Surface presentation of antigens (SPOA) protein n=1 Tax=Rhodospirillum rubrum ATCC 11170 RepID=Q2RPI0_RHORT Length = 93 Score = 53.9 bits (128), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 26/71 (36%), Positives = 49/71 (69%), Gaps = 1/71 (1%) Query: 57 IMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQGEVVVV-A 115 + +PV+++V LG+ + + +LL+L +G+VV L+ EP++I N L+A+GEV++ Sbjct: 15 VYTVPVEISVVLGKAVLRVNQLLKLGRGAVVELEQKISEPVEIYANDILVARGEVIITDG 74 Query: 116 DKYGVRITDII 126 DK GV +T+++ Sbjct: 75 DKIGVTLTELV 85 >UniRef50_Q1CTU2 Flagellar switch protein n=20 Tax=Helicobacteraceae RepID=Q1CTU2_HELPH Length = 123 Score = 53.9 bits (128), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 24/70 (34%), Positives = 45/70 (64%) Query: 57 IMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQGEVVVVAD 116 ++D+ + + ELG T++ + ++LR +GSV+ L AGE +D +NG +I +GEV+V Sbjct: 41 LLDMEIVFSAELGSTQIPLLQILRFEKGSVIDLQKPAGESVDTFVNGRVIGKGEVMVFER 100 Query: 117 KYGVRITDII 126 +R+ +I+ Sbjct: 101 NLAIRLNEIL 110 >UniRef50_A9DR59 Flagellar motor switch protein n=1 Tax=Oceanibulbus indolifex HEL-45 RepID=A9DR59_9RHOB Length = 154 Score = 53.9 bits (128), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 27/74 (36%), Positives = 51/74 (68%), Gaps = 1/74 (1%) Query: 54 IDLIMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQGEVVV 113 I+ ++++ + + + LG+ RM I LL LT+GS+V L+ G P+D++++ L+A+G++V Sbjct: 75 INAMLNVGLDVQIVLGQARMPISRLLELTRGSIVELNRKIGAPVDLMVSDRLVARGDLVK 134 Query: 114 VA-DKYGVRITDII 126 V D+ GV +T I+ Sbjct: 135 VGEDRLGVSLTQIV 148 >UniRef50_C0QPA3 Flagellar motor switch phosphatase FliY n=1 Tax=Persephonella marina EX-H1 RepID=C0QPA3_PERMH Length = 79 Score = 53.9 bits (128), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 24/74 (32%), Positives = 45/74 (60%) Query: 52 QDIDLIMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQGEV 111 DI + D+ VK+T E+GR + E++ L +G ++ LD + +++ + L A GE+ Sbjct: 5 HDISFLKDVTVKVTGEVGRVKKLFIEIITLKEGDIIKLDKHIEDYVELYVKDQLFAVGEL 64 Query: 112 VVVADKYGVRITDI 125 +V +KYG+R+ D+ Sbjct: 65 IVANEKYGIRVVDL 78 >UniRef50_B1LY10 Surface presentation of antigens (SPOA) protein n=9 Tax=Alphaproteobacteria RepID=B1LY10_METRJ Length = 122 Score = 53.1 bits (126), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 27/65 (41%), Positives = 44/65 (67%) Query: 62 VKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQGEVVVVADKYGVR 121 V LTV LGR RM + LLR+ +G+V+ L+ + ++IL N + IA+G++VV D+ V Sbjct: 30 VDLTVVLGRARMPLHMLLRMGRGAVIELEASDSDMVEILANDHPIARGQIVVTGDRISVE 89 Query: 122 ITDII 126 +T++I Sbjct: 90 VTELI 94 >UniRef50_Q1IR63 Flagellar motor switch FliN n=1 Tax=Candidatus Koribacter versatilis Ellin345 RepID=Q1IR63_ACIBL Length = 252 Score = 52.8 bits (125), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 24/61 (39%), Positives = 42/61 (68%) Query: 65 TVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQGEVVVVADKYGVRITD 124 T+ G+ M ++++L L GSVV LD +P+++L++G +IA+G VVVV YG+R+ + Sbjct: 186 TLRFGQREMLLQDILELQSGSVVELDREIQDPVELLLDGRVIARGSVVVVDGNYGLRVAE 245 Query: 125 I 125 + Sbjct: 246 V 246 >UniRef50_C6N6Z9 Putative surface presentation of antigens (SPOA) protein n=1 Tax=Legionella drancourtii LLAP12 RepID=C6N6Z9_9GAMM Length = 101 Score = 52.4 bits (124), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 27/72 (37%), Positives = 45/72 (62%) Query: 56 LIMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQGEVVVVA 115 L+ DI V+ TV +G +TI EL L G + L+ EP++I++N +IA+GE++ Sbjct: 30 LVGDIEVQCTVRIGTLNLTIAELKELKSGQELHLEQKTHEPVEIVLNERVIARGELMSHE 89 Query: 116 DKYGVRITDIIT 127 D + V+IT+I + Sbjct: 90 DHFAVQITEIYS 101 >UniRef50_A8EW59 Flagellar motor switch protein FliN n=1 Tax=Arcobacter butzleri RM4018 RepID=A8EW59_ARCB4 Length = 95 Score = 51.2 bits (121), Expect = 9e-06, Method: Compositional matrix adjust. Identities = 25/81 (30%), Positives = 48/81 (59%) Query: 55 DLIMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQGEVVVV 114 DL++D + + V LG T +++ E L+LT+G +++L AG +I +N +I G+++V+ Sbjct: 9 DLLVDTEIVVDVMLGSTNISVGEFLKLTEGDIISLHKPAGSGGEIYVNSRIIGTGDIIVI 68 Query: 115 ADKYGVRITDIITPSERMRRL 135 +K VR+ D + +R Sbjct: 69 DEKLAVRVQDAMDSDNVVRYF 89 >UniRef50_UPI0001C312B8 CheC, inhibitor of MCP methylation n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C312B8 Length = 301 Score = 51.2 bits (121), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 29/84 (34%), Positives = 50/84 (59%), Gaps = 1/84 (1%) Query: 43 GGGDVSGTLQDIDLIMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILIN 102 G GDV + D + DI V++ ELGRTR+ + + + GSV+ LD A +P+D+ +N Sbjct: 199 GEGDVHEQVALDDALRDIRVRVWAELGRTRVPLGQAPDMPAGSVLELDRKADDPVDLYVN 258 Query: 103 GYLIAQGEVVVVAD-KYGVRITDI 125 G A G +V+ D ++ +R+ ++ Sbjct: 259 GLRFASGTLVLTDDGEWALRLAEV 282 >UniRef50_C1ZEH8 Flagellar motor switch/type III secretory pathway protein n=1 Tax=Planctomyces limnophilus DSM 3776 RepID=C1ZEH8_PLALI Length = 396 Score = 50.1 bits (118), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 25/74 (33%), Positives = 40/74 (54%) Query: 62 VKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQGEVVVVADKYGVR 121 V+L+V L RM + LL+L+ G++V + LDI I AQGE V + + +GV+ Sbjct: 320 VQLSVRLAEKRMPLAALLQLSPGALVTFSKPCEDLLDIYIGNRQYAQGEAVKIGEHFGVK 379 Query: 122 ITDIITPSERMRRL 135 + + P E+ L Sbjct: 380 VNRLGPPPEKPSSL 393 >UniRef50_B0K1R9 Flagellar motor switch protein FliM n=14 Tax=Clostridia RepID=B0K1R9_THEPX Length = 332 Score = 50.1 bits (118), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 25/65 (38%), Positives = 40/65 (61%) Query: 62 VKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQGEVVVVADKYGVR 121 + LT +LG T +T+KE L G ++ LD EP+DI+I+ + +G + +KY VR Sbjct: 260 IPLTAQLGSTTITVKEFLDFEIGDIIMLDKHFKEPVDIIIDKKVKFRGIPGIKNNKYSVR 319 Query: 122 ITDII 126 IT++I Sbjct: 320 ITEVI 324 >UniRef50_A0NWB8 Putative uncharacterized protein n=3 Tax=Rhodobacteraceae RepID=A0NWB8_9RHOB Length = 88 Score = 48.9 bits (115), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 24/68 (35%), Positives = 45/68 (66%) Query: 59 DIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQGEVVVVADKY 118 +I V ++V LG M + +LLR+ +G+V+ LD E + I N L+A+G+VV++ ++ Sbjct: 6 EIKVDISVVLGENEMPVHQLLRMGRGAVIDLDVAEDEDVKIYANNTLVAKGQVVLLGERI 65 Query: 119 GVRITDII 126 G+ IT+++ Sbjct: 66 GISITEVL 73 >UniRef50_C5CYF0 Surface presentation of antigens (SPOA) protein n=1 Tax=Variovorax paradoxus S110 RepID=C5CYF0_VARPS Length = 151 Score = 48.9 bits (115), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 28/82 (34%), Positives = 48/82 (58%), Gaps = 1/82 (1%) Query: 44 GGDVSGTLQDIDLIMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILING 103 GGD S L+D + + I +L V +G +++ ELL + V+ LD P+D+ I G Sbjct: 61 GGDAS-ILKDWNPLHQIKARLQVCVGAVSLSVGELLGAKEHQVLRLDREIDHPVDLTIEG 119 Query: 104 YLIAQGEVVVVADKYGVRITDI 125 ++A+G++V V + VRIT++ Sbjct: 120 KVVARGQLVAVDGHFAVRITEL 141 >UniRef50_D2R2R8 Surface presentation of antigens (SPOA) protein n=1 Tax=Pirellula staleyi DSM 6068 RepID=D2R2R8_9PLAN Length = 329 Score = 48.9 bits (115), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 23/77 (29%), Positives = 46/77 (59%), Gaps = 2/77 (2%) Query: 56 LIMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQGEVVVVA 115 L +++PV++T L T++ +K ++ L GS++ + L + + + +A GE V V Sbjct: 241 LRIEVPVRVT--LATTQLPLKRIVELGPGSIIQFEKPCDSELSLQVGEHEVAIGEAVKVG 298 Query: 116 DKYGVRITDIITPSERM 132 +K+G+R+T ++ P ER Sbjct: 299 EKFGLRLTSMVMPPERF 315 >UniRef50_A4U4R5 Surface presentation of antigens (SPOA) protein n=1 Tax=Magnetospirillum gryphiswaldense RepID=A4U4R5_9PROT Length = 90 Score = 48.9 bits (115), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 25/67 (37%), Positives = 41/67 (61%) Query: 60 IPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQGEVVVVADKYG 119 + V+ LG + I +LL+L +G+VV LD +P+D+ +N IA+ EVVVV D Sbjct: 19 VNVECIAVLGTANLPIAQLLKLGRGAVVELDRKVNDPVDLYVNRKHIARAEVVVVEDHLA 78 Query: 120 VRITDII 126 V +T+++ Sbjct: 79 VTVTEVL 85 >UniRef50_Q7UIS4 Probable flagellar motor switch protein fliN [Fragment] n=1 Tax=Rhodopirellula baltica RepID=Q7UIS4_RHOBA Length = 144 Score = 48.9 bits (115), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 29/124 (23%), Positives = 54/124 (43%), Gaps = 14/124 (11%) Query: 7 PADDNNGAMDDLWAEALSEQKSTSSKSAAETVFQQFGGGDVSGTLQDIDLIMDIPVKLTV 66 P D + +E +E K T ++++ + ++ I + V Sbjct: 34 PVDKRCVRIQGRMSENATEDKPTEPSPPTSSMYK--------------EKVLKIRTTVNV 79 Query: 67 ELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQGEVVVVADKYGVRITDII 126 L + ++++L L GS++ D PL + G+ IA GE V + DK+G+R+ +I Sbjct: 80 TLAEKKEPLRKILALVPGSMLTFDVHCDRPLTLRAGGHPIATGETVKIGDKFGLRVREIG 139 Query: 127 TPSE 130 P E Sbjct: 140 VPKE 143 >UniRef50_C3XFR2 Flagellar motor switch protein FliN n=1 Tax=Helicobacter bilis ATCC 43879 RepID=C3XFR2_9HELI Length = 128 Score = 48.9 bits (115), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 22/81 (27%), Positives = 49/81 (60%) Query: 57 IMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQGEVVVVAD 116 ++D+ V + +LG T++ + E+L+ +GS++ L AG ++I +N ++ +GEV+V Sbjct: 41 LLDMKVLFSADLGTTQIPLNEILKYEKGSIIDLQKPAGASVEIFVNDRVVGKGEVMVYER 100 Query: 117 KYGVRITDIITPSERMRRLSR 137 +RI +I+ + + ++R Sbjct: 101 NLAIRINEILDSNAIVYYIAR 121 >UniRef50_B6IT07 Flagellar motor switch protein FliN n=2 Tax=Rhodospirillum centenum RepID=B6IT07_RHOCS Length = 103 Score = 48.5 bits (114), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 25/70 (35%), Positives = 46/70 (65%) Query: 51 LQDIDLIMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQGE 110 L +I I D V+++V LG + + +++LL+L +G++V LD + DI+++G ++ +GE Sbjct: 24 LPEISAIYDTEVEVSVVLGTSTIRVRDLLKLGRGAIVELDRKIDDLSDIIVSGRMVGRGE 83 Query: 111 VVVVADKYGV 120 V +V DK V Sbjct: 84 VTIVEDKIAV 93 >UniRef50_Q48IQ1 Type III secretion component, putative n=1 Tax=Pseudomonas syringae pv. phaseolicola 1448A RepID=Q48IQ1_PSE14 Length = 301 Score = 48.5 bits (114), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 24/71 (33%), Positives = 44/71 (61%), Gaps = 1/71 (1%) Query: 53 DIDLIMD-IPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQGEV 111 D+D +D +P+ L +LG +T+ +L + GS++ L G + +D+++NG I +GE+ Sbjct: 225 DLDTSLDELPLTLVCQLGSVELTLAQLREMAPGSLLPLAGSRHDEVDLMVNGRRIGRGEL 284 Query: 112 VVVADKYGVRI 122 V + D GVR+ Sbjct: 285 VSIGDGLGVRL 295 >UniRef50_A6CBY5 Probable flagellar motor switch protein fliN n=1 Tax=Planctomyces maris DSM 8797 RepID=A6CBY5_9PLAN Length = 295 Score = 48.1 bits (113), Expect = 9e-05, Method: Compositional matrix adjust. Identities = 22/93 (23%), Positives = 45/93 (48%) Query: 30 SSKSAAETVFQQFGGGDVSGTLQDIDLIMDIPVKLTVELGRTRMTIKELLRLTQGSVVAL 89 S S + Q + ++ I +PV+ V+L ++ + +LL + GS++ Sbjct: 187 SPSSTPQATPQMVQATPANSNRNPLNRISKLPVQAIVKLASKKIEMNQLLSICPGSLITF 246 Query: 90 DGLAGEPLDILINGYLIAQGEVVVVADKYGVRI 122 D +PL++ IN + GE V + + +G++I Sbjct: 247 DKPCEDPLELYINNQVYCLGEAVKIGEHFGLKI 279 >UniRef50_B8DI82 Flagellar motor switch protein n=20 Tax=Listeria RepID=B8DI82_LISMH Length = 515 Score = 47.8 bits (112), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 37/135 (27%), Positives = 71/135 (52%), Gaps = 11/135 (8%) Query: 1 MSDMNNPADDNNGA--MDDLWAEALSEQKSTSS------KSAAETVFQQFGGGDVSGTLQ 52 M + NPA A M + A+ ++E+++T+ + AE V Q + TL Sbjct: 382 MYQIFNPAAAKEMAQLMLGIQAKEVAEKEATTPAEIIEPEKPAEPVHQ--AVIEEKETLS 439 Query: 53 DIDLIM-DIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQGEV 111 +++ I+ DIPV L V G ++ +++ + + V+ L EPL + +NG I +G + Sbjct: 440 EMEQILEDIPVTLEVVFGTAKVKLEKFISWCEKDVIILKESMNEPLVLALNGVTIGKGIL 499 Query: 112 VVVADKYGVRITDII 126 V V D +G+++T+++ Sbjct: 500 VRVDDHFGIQMTELV 514 >UniRef50_D2TZ40 Type III secretion apparatus protein YscQ,HrcQ,SpaO n=1 Tax=Arsenophonus nasoniae RepID=D2TZ40_9ENTR Length = 292 Score = 47.8 bits (112), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 24/68 (35%), Positives = 39/68 (57%) Query: 59 DIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQGEVVVVADKY 118 DIP+ L L + ++ + EL + QG V+ D A + I+ NG LIA+G ++ + D+ Sbjct: 221 DIPITLEYILQKRKIPLLELENIFQGKVLPCDLAAENNVKIVANGVLIAKGNIIWIEDRL 280 Query: 119 GVRITDII 126 GV IT + Sbjct: 281 GVEITHLF 288 >UniRef50_B4R925 FliN family protein n=8 Tax=Alphaproteobacteria RepID=B4R925_PHEZH Length = 108 Score = 47.4 bits (111), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 22/62 (35%), Positives = 40/62 (64%) Query: 62 VKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQGEVVVVADKYGVR 121 V++ V LGR + +++LLR+ +G+V+ LD E + IL N + +A+GE+ + DK + Sbjct: 34 VEIQVVLGRASLPMQQLLRMGRGAVIPLDATVNEEVWILANNHPVARGEIQISDDKIAIA 93 Query: 122 IT 123 +T Sbjct: 94 VT 95 >UniRef50_A8LMS4 Flagellar motor switch protein FliN n=5 Tax=Rhodobacteraceae RepID=A8LMS4_DINSH Length = 89 Score = 47.4 bits (111), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 24/71 (33%), Positives = 47/71 (66%), Gaps = 2/71 (2%) Query: 60 IPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQGEVVVVADKY- 118 +P+ L+V +G+ T++ELL L + +V+ LD +P+++ + +LIA+G + AD + Sbjct: 15 VPIALSVSVGQAHPTVRELLALEKDAVLLLDKRIEDPVELYVGTHLIARGVLEEDADSHR 74 Query: 119 -GVRITDIITP 128 VR+T++I+P Sbjct: 75 LSVRLTEVISP 85 >UniRef50_UPI00016C4201 hypothetical protein GobsU_09164 n=1 Tax=Gemmata obscuriglobus UQM 2246 RepID=UPI00016C4201 Length = 117 Score = 47.4 bits (111), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 29/82 (35%), Positives = 50/82 (60%) Query: 48 SGTLQDIDLIMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIA 107 +G ++ + D+P+ +T LGR + I E+L L GSVV L+ + P+++ + G A Sbjct: 30 TGPGSTLESLRDVPITITARLGRAVLPIGEILTLGPGSVVELEEVISAPVELTVRGVPFA 89 Query: 108 QGEVVVVADKYGVRITDIITPS 129 GEVVVV + + VRI +++ P+ Sbjct: 90 VGEVVVVGEHFAVRIKNLLPPT 111 >UniRef50_Q1IR54 Surface presentation of antigens (SPOA) protein n=1 Tax=Candidatus Koribacter versatilis Ellin345 RepID=Q1IR54_ACIBL Length = 109 Score = 47.0 bits (110), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 31/102 (30%), Positives = 52/102 (50%), Gaps = 5/102 (4%) Query: 29 TSSKSAAE---TVFQQFGGGDVSGTLQD--IDLIMDIPVKLTVELGRTRMTIKELLRLTQ 83 T S+ E TV Q G S ++ ++ + +T+EL R T++++L L Sbjct: 7 THSRCGTEGWWTVIQNESGAKQSEDIRSEGMNSFRHLQCTVTLELPVPRFTVRQMLELRP 66 Query: 84 GSVVALDGLAGEPLDILINGYLIAQGEVVVVADKYGVRITDI 125 G+VV L + +NG L+A E VV ++YGVR+T++ Sbjct: 67 GAVVDTCWSQATDLPLRVNGALLAWSEFEVVDNRYGVRLTEL 108 >UniRef50_Q18CW8 Flagellar motor switch protein n=5 Tax=Clostridium difficile RepID=Q18CW8_CLOD6 Length = 104 Score = 47.0 bits (110), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 28/96 (29%), Positives = 50/96 (52%), Gaps = 3/96 (3%) Query: 33 SAAETVFQ-QFGG--GDVSGTLQDIDLIMDIPVKLTVELGRTRMTIKELLRLTQGSVVAL 89 S E +++ FG + +G +++ + + V + V +G TIK +L L +GS++ L Sbjct: 3 SKKEDIYELNFGQLIEEKTGIIEENQNVFNAKVNVAVSIGNITETIKNILDLKEGSIIKL 62 Query: 90 DGLAGEPLDILINGYLIAQGEVVVVADKYGVRITDI 125 + E LDI N L A GE ++ + VR++ I Sbjct: 63 NKNVDEKLDIYANDRLFAYGESIITNETLSVRLSKI 98 >UniRef50_A0RC99 Flagellar motor switch protein N n=71 Tax=Bacillus cereus group RepID=A0RC99_BACAH Length = 119 Score = 46.6 bits (109), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 23/87 (26%), Positives = 49/87 (56%) Query: 39 FQQFGGGDVSGTLQDIDLIMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLD 98 + F G + ID + DI ++L V+LG+ +T+ ++ L G V+ ++ G +D Sbjct: 13 LEDFAGKRNEASKAHIDTVSDISIELGVKLGKASITLGDVKELKVGDVLEVEKNLGHKVD 72 Query: 99 ILINGYLIAQGEVVVVADKYGVRITDI 125 + ++ + GE +V+ +K+G+ I++I Sbjct: 73 VYLSNMKVGIGEAIVMDEKFGIIISEI 99 >UniRef50_A7K019 Type III secretion inner membrane protein YscQ n=13 Tax=Vibrionaceae RepID=A7K019_VIBSE Length = 322 Score = 46.2 bits (108), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 21/67 (31%), Positives = 41/67 (61%) Query: 60 IPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQGEVVVVADKYG 119 +PV+LT ++G +T+++L +L G V L+ +P+ + NG +I + E+V V + G Sbjct: 249 LPVELTFDIGHQTITLEQLNQLQPGYVFELNQPVSKPVTLRANGKIIGECELVNVNEHLG 308 Query: 120 VRITDII 126 VR+ ++ Sbjct: 309 VRVLELF 315 >UniRef50_B8CYQ6 Flagellar motor switch protein FliM n=1 Tax=Halothermothrix orenii H 168 RepID=B8CYQ6_HALOH Length = 334 Score = 46.2 bits (108), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 31/92 (33%), Positives = 47/92 (51%), Gaps = 4/92 (4%) Query: 40 QQFGGGDVSGTLQDIDLIMD----IPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGE 95 Q F T Q I+ I P+++ E+G+T++T+ +LL L G V+ LD A E Sbjct: 233 QWFSNTREERTAQHIEAIKKKLKRAPLEVIAEVGKTQLTVTDLLYLQPGDVIRLDKKAEE 292 Query: 96 PLDILINGYLIAQGEVVVVADKYGVRITDIIT 127 +DI I + QG V V+ITD+I+ Sbjct: 293 KVDIRIGKNVKFQGVAGVSNKHMAVKITDVIS 324 >UniRef50_A7HWV0 Surface presentation of antigens (SPOA) protein n=1 Tax=Parvibaculum lavamentivorans DS-1 RepID=A7HWV0_PARL1 Length = 78 Score = 45.8 bits (107), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 24/72 (33%), Positives = 45/72 (62%) Query: 59 DIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQGEVVVVADKY 118 ++ V+L+V LG++ M I +LL++ +G+V+ L E + +L N IA+GE++V ++ Sbjct: 6 NVFVELSVVLGKSTMPIHQLLKMGRGAVIELGTRQDEEIWVLANNVPIARGEIIVQGERV 65 Query: 119 GVRITDIITPSE 130 V IT ++ E Sbjct: 66 AVSITTVLAGGE 77 >UniRef50_Q2SH51 Flagellar motor switch/type III secretory pathway protein n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SH51_HAHCH Length = 397 Score = 45.4 bits (106), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 23/72 (31%), Positives = 39/72 (54%) Query: 57 IMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQGEVVVVAD 116 + D+PV++ E+ R T+ ++ L G +ALD + +L+ IA+ E+V V D Sbjct: 300 LHDLPVEVVFEVARRTATLTQIQSLAPGQTIALDKPLSGAVTLLVQSQAIAEAELVQVGD 359 Query: 117 KYGVRITDIITP 128 + G RIT + P Sbjct: 360 QIGARITRLSLP 371 >UniRef50_B1I5G4 CheC, inhibitor of MCP methylation n=1 Tax=Candidatus Desulforudis audaxviator MP104C RepID=B1I5G4_DESAP Length = 369 Score = 45.4 bits (106), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 21/47 (44%), Positives = 35/47 (74%) Query: 43 GGGDVSGTLQDIDLIMDIPVKLTVELGRTRMTIKELLRLTQGSVVAL 89 G G L+ +DLI+D+P+K+TV LGR++ IK++L LT GS++++ Sbjct: 290 GAGFSELALEKLDLILDLPLKVTVILGRSKRPIKDVLGLTPGSIISV 336 >UniRef50_B6WRL8 Putative uncharacterized protein n=1 Tax=Desulfovibrio piger ATCC 29098 RepID=B6WRL8_9DELT Length = 398 Score = 45.4 bits (106), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 39/124 (31%), Positives = 58/124 (46%), Gaps = 12/124 (9%) Query: 2 SDMNNPADDNNGAMDDLWAEALSEQKSTSSKSAAETVFQQFGGGDVSGTLQDIDL-IMDI 60 DM +P + AE SE + + A V Q G S T++ + +++ Sbjct: 263 PDMGDPGREP--------AEKGSEDGMSEERLAPTGVVQSDGAAAESATVEPASVGALEL 314 Query: 61 PVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPL-DILINGYLIAQGEVVVVADKYG 119 PV E+GR + + EL L G +AL G P+ DI + G L+AQG +V V G Sbjct: 315 PV--VFEIGRLHLRLDELAALVPGHTLALGGETPSPVVDIRVAGQLLAQGRLVDVGGIPG 372 Query: 120 VRIT 123 V+IT Sbjct: 373 VQIT 376 >UniRef50_A9APA9 Type III secretion system apparatus protein YscQ/HrcQ n=17 Tax=Burkholderia RepID=A9APA9_BURM1 Length = 443 Score = 44.7 bits (104), Expect = 0.001, Method: Composition-based stats. Identities = 26/75 (34%), Positives = 39/75 (52%), Gaps = 1/75 (1%) Query: 60 IPVKLTVELGRTRMTIKELLRLTQGSVVALD-GLAGEPLDILINGYLIAQGEVVVVADKY 118 + V L EL T M + EL L G+V+ L G+ + ++ NG LI G ++ V K Sbjct: 369 LAVDLRFELPPTSMPLGELSALQPGAVIELQQGINQSVIHLVANGMLIGTGHLIAVGQKL 428 Query: 119 GVRITDIITPSERMR 133 GVR+ + P+ R R Sbjct: 429 GVRVVTLTQPAPRER 443 >UniRef50_Q11M61 Surface presentation of antigens (SPOA) protein n=1 Tax=Chelativorans sp. BNC1 RepID=Q11M61_MESSB Length = 354 Score = 44.3 bits (103), Expect = 0.001, Method: Compositional matrix adjust. Identities = 26/86 (30%), Positives = 44/86 (51%) Query: 39 FQQFGGGDVSGTLQDIDLIMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLD 98 + +FG G + D I D+PV+L R+T++EL L G+ + L+ P+ Sbjct: 259 WSEFGAGAIYDEPPLADPIEDLPVRLDFLFSTQRITLEELRALGPGATLRLNVDLTRPVT 318 Query: 99 ILINGYLIAQGEVVVVADKYGVRITD 124 IL NG +G +V + D GV+++ Sbjct: 319 ILANGAPAGRGYLVQIGDHMGVQLSH 344 >UniRef50_Q2NR65 Type III secretion apparatus SpaO n=2 Tax=Sodalis glossinidius RepID=Q2NR65_SODGM Length = 338 Score = 44.3 bits (103), Expect = 0.001, Method: Compositional matrix adjust. Identities = 27/93 (29%), Positives = 51/93 (54%), Gaps = 4/93 (4%) Query: 33 SAAETVFQQFGGGDVSGTLQDIDLIMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDGL 92 +AA T + GD + D + ++P+ L L R +++ E+ + QG V+ LD Sbjct: 242 AAAPTPTGRLALGDDTAA----DPLANLPLTLEFILQRRYLSLGEIQQFRQGKVLELDPE 297 Query: 93 AGEPLDILINGYLIAQGEVVVVADKYGVRITDI 125 + ++I NG+L+A GE+V + D+ GV + ++ Sbjct: 298 GEKHIEIRANGHLLALGELVQLEDRLGVELMEL 330 >UniRef50_A7GNF7 CheC, inhibitor of MCP methylation n=70 Tax=Bacillales RepID=A7GNF7_BACCN Length = 554 Score = 44.3 bits (103), Expect = 0.001, Method: Compositional matrix adjust. Identities = 23/71 (32%), Positives = 40/71 (56%) Query: 53 DIDLIMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQGEVV 112 D ++ ++ + + G T TI+++L L + V LD EP+ I +N L+A GE+V Sbjct: 481 DTSILQNVEMNVRFVFGSTVRTIEDILSLHENDAVVLDEEVDEPIRIYVNNVLVAYGELV 540 Query: 113 VVADKYGVRIT 123 V +GV++T Sbjct: 541 NVDGFFGVKVT 551 >UniRef50_A4J3G9 CheC, inhibitor of MCP methylation n=2 Tax=Desulfotomaculum RepID=A4J3G9_DESRM Length = 333 Score = 43.9 bits (102), Expect = 0.001, Method: Compositional matrix adjust. Identities = 27/97 (27%), Positives = 52/97 (53%), Gaps = 1/97 (1%) Query: 27 KSTSSKSAAETVFQQFGGGDVSGTLQDIDLIMDIPVKLTVELGRTRMTIKELLRLTQGSV 86 ++T K++ ETV Q F L ++ + IPV L LG+ R T +L +L +G Sbjct: 230 ENTEEKASDETVIQNFTQTKAPFDLPNLAGALAIPVDLEFSLGKIRCTAGDLAKLKKGDT 289 Query: 87 VALDGLAGEPLDILINGYLIAQGEVVVVADKYGVRIT 123 +A+ + + + +L+ G +A GE+ A++ ++I+ Sbjct: 290 LAIP-FSSQQIKLLVGGIPVALGELQTHAEETKIKIS 325 >UniRef50_C4PNI3 Type III secretion component, basal body n=13 Tax=Chlamydiaceae RepID=C4PNI3_CHLTZ Length = 373 Score = 43.9 bits (102), Expect = 0.002, Method: Compositional matrix adjust. Identities = 20/66 (30%), Positives = 40/66 (60%), Gaps = 5/66 (7%) Query: 63 KLTVELGRTRMTIKELLRLTQGSVVALDGLAGEP---LDILINGYLIAQGEVVVVADKYG 119 K+ E+ R +++ E L+L GSV+ DG+ P +DI++NG + +G ++ + D G Sbjct: 310 KIVAEVARYSLSVGEFLKLGPGSVLQFDGV--HPTLGVDIILNGAKVGRGNIIALQDVLG 367 Query: 120 VRITDI 125 +R+ ++ Sbjct: 368 IRVLEV 373 >UniRef50_P74860 Secretion system apparatus protein ssaQ n=37 Tax=Salmonella enterica RepID=SSAQ_SALTY Length = 322 Score = 43.1 bits (100), Expect = 0.003, Method: Compositional matrix adjust. Identities = 21/65 (32%), Positives = 37/65 (56%) Query: 59 DIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQGEVVVVADKY 118 IP ++ E+GR + I +L +L G V+ + G + I +N +I QGE++ +++ Sbjct: 249 QIPQQVLFEVGRASLEIGQLRQLKTGDVLPVGGCFAPEVTIRVNDRIIGQGELIACGNEF 308 Query: 119 GVRIT 123 VRIT Sbjct: 309 MVRIT 313 >UniRef50_B2A358 Flagellar motor switch protein FliM n=1 Tax=Natranaerobius thermophilus JW/NM-WN-LF RepID=B2A358_NATTJ Length = 333 Score = 43.1 bits (100), Expect = 0.003, Method: Compositional matrix adjust. Identities = 22/67 (32%), Positives = 40/67 (59%), Gaps = 2/67 (2%) Query: 60 IPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQGEVVVVADKYG 119 +PVK EL RTR+++KE L L +G V++L+ +D+++ +G+ + +K Sbjct: 260 VPVK--AELARTRISVKEFLNLQEGDVISLNKPFESEIDLIVGKKTKFKGKPGSIKNKLA 317 Query: 120 VRITDII 126 V+IT I+ Sbjct: 318 VQITQIV 324 >UniRef50_A3VS57 Putative uncharacterized protein n=1 Tax=Parvularcula bermudensis HTCC2503 RepID=A3VS57_9PROT Length = 90 Score = 43.1 bits (100), Expect = 0.003, Method: Compositional matrix adjust. Identities = 22/65 (33%), Positives = 40/65 (61%) Query: 48 SGTLQDIDLIMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIA 107 S Q+ + DI + ++V +GR +M++KEL +VV L A EP++++++G +IA Sbjct: 4 SAKAQNKQPLYDIELPVSVVVGRMKMSLKELSEWAPDTVVPLLSRADEPVELVVDGQVIA 63 Query: 108 QGEVV 112 GE+ Sbjct: 64 TGELC 68 >UniRef50_UPI0001744A0D type III secretion system protein n=1 Tax=Verrucomicrobium spinosum DSM 4136 RepID=UPI0001744A0D Length = 342 Score = 43.1 bits (100), Expect = 0.003, Method: Compositional matrix adjust. Identities = 27/89 (30%), Positives = 49/89 (55%), Gaps = 3/89 (3%) Query: 40 QQFGGGDVSGT---LQDIDLIMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEP 96 QQF D + T + + L+ + V+LT +G T+++L L G+ + L A + Sbjct: 251 QQFIMSDPAPTPAATEPLALVDQLEVELTFLVGTHAATLEQLRSLAPGACIELPTPASQA 310 Query: 97 LDILINGYLIAQGEVVVVADKYGVRITDI 125 + I NG I +GE++ + ++ GVRIT++ Sbjct: 311 VTICANGRAIGKGELLDIGNRIGVRITEL 339 >UniRef50_B1FB78 Type III secretion system apparatus protein YscQ/HrcQ n=1 Tax=Burkholderia ambifaria IOP40-10 RepID=B1FB78_9BURK Length = 309 Score = 42.7 bits (99), Expect = 0.003, Method: Compositional matrix adjust. Identities = 22/66 (33%), Positives = 36/66 (54%) Query: 60 IPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQGEVVVVADKYG 119 +PVKL + +T+ ++ RL G+V+ LD A + I NG +A GE++ V ++ Sbjct: 238 LPVKLEFAFRQRELTVADVARLHPGAVLPLDAGAEHEVKIYANGRYLALGELIQVGERLA 297 Query: 120 VRITDI 125 V I I Sbjct: 298 VEIQSI 303 >UniRef50_B2V6Q2 Surface presentation of antigens (SPOA) protein n=2 Tax=Sulfurihydrogenibium RepID=B2V6Q2_SULSY Length = 87 Score = 42.0 bits (97), Expect = 0.005, Method: Compositional matrix adjust. Identities = 24/81 (29%), Positives = 44/81 (54%) Query: 46 DVSGTLQDIDLIMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYL 105 +V + I LI +I + + +EL + + LL L +G ++ L+ + ++I Sbjct: 6 EVDEIYKKISLIKNINIPIVIELASLKKNFEFLLNLKEGDIIDLEKNIEDFVNIYFLNEK 65 Query: 106 IAQGEVVVVADKYGVRITDII 126 + GE+V V +KYGVR+ D+I Sbjct: 66 VGFGELVNVNEKYGVRLVDLI 86 >UniRef50_Q3SBB5 EpaO n=13 Tax=Escherichia RepID=Q3SBB5_ECOLX Length = 315 Score = 42.0 bits (97), Expect = 0.006, Method: Compositional matrix adjust. Identities = 25/76 (32%), Positives = 41/76 (53%) Query: 52 QDIDLIMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQGEV 111 Q I+ D+PVK+ LG+ M + E L +++L + + ++I +NG L GE+ Sbjct: 234 QMINSFEDLPVKIEFVLGKKIMNLYETDELCAKRIISLLPESEKNIEIRVNGALTGYGEL 293 Query: 112 VVVADKYGVRITDIIT 127 V V DK GV I ++ Sbjct: 294 VEVDDKLGVEIHSWLS 309 >UniRef50_A0AGF3 Complete genome n=15 Tax=Listeria RepID=A0AGF3_LISW6 Length = 78 Score = 41.6 bits (96), Expect = 0.007, Method: Compositional matrix adjust. Identities = 22/67 (32%), Positives = 38/67 (56%) Query: 59 DIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQGEVVVVADKY 118 +IP+++ ELGRT+ + LL + +G+V L+ + I I+G I GE++ K Sbjct: 6 NIPLRIDFELGRTKQPVGSLLDVKKGTVFRLEDSTANVVKITISGKCIGYGEILTKDGKM 65 Query: 119 GVRITDI 125 V+IT + Sbjct: 66 FVKITKL 72 >UniRef50_Q67K08 Flagellar motor switch protein n=1 Tax=Symbiobacterium thermophilum RepID=Q67K08_SYMTH Length = 308 Score = 41.6 bits (96), Expect = 0.008, Method: Compositional matrix adjust. Identities = 23/71 (32%), Positives = 37/71 (52%) Query: 57 IMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQGEVVVVAD 116 + + P+ + LG+TRM + E L L G V+ LD G L + + L Q + VV + Sbjct: 238 VQEAPLPVKALLGKTRMRLGEFLALQVGDVIRLDARVGGELPVFVGNKLAFQAKPGVVGE 297 Query: 117 KYGVRITDIIT 127 + V+IT +T Sbjct: 298 RMAVQITRRVT 308 >UniRef50_D0FW27 Hrp/hrc Type III secretion system-Hrp/hrc secretion/translocation pathway-hrcQ protein n=4 Tax=Erwinia RepID=D0FW27_ERWPY Length = 341 Score = 41.6 bits (96), Expect = 0.008, Method: Compositional matrix adjust. Identities = 24/58 (41%), Positives = 33/58 (56%) Query: 57 IMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQGEVVVV 114 + +P+ L V GRT +T+ EL RL GSVV LD + + LIA+GE+V V Sbjct: 264 LASLPLSLEVRCGRTALTLGELQRLQAGSVVTLDNVTPGEAGLYHGDTLIARGELVDV 321 >UniRef50_C1DW32 Flagellar motor switch protein FliN/FliY n=1 Tax=Sulfurihydrogenibium azorense Az-Fu1 RepID=C1DW32_SULAA Length = 83 Score = 41.2 bits (95), Expect = 0.011, Method: Compositional matrix adjust. Identities = 23/77 (29%), Positives = 44/77 (57%) Query: 50 TLQDIDLIMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQG 109 T++D+ L+ D+ V++ VEL + LL + +G ++ L+ + L + + A G Sbjct: 3 TIEDLKLLKDVEVEVRVELSTIVRNFEFLLNIKEGDIIPLEKSLEDFLIMHVGNIPFAIG 62 Query: 110 EVVVVADKYGVRITDII 126 E+ + +KYG+RI D+I Sbjct: 63 EMTNINEKYGIRIVDLI 79 >UniRef50_Q02KI5 Translocation protein in type III secretion n=5 Tax=Pseudomonas aeruginosa RepID=Q02KI5_PSEAB Length = 309 Score = 40.8 bits (94), Expect = 0.014, Method: Compositional matrix adjust. Identities = 25/76 (32%), Positives = 44/76 (57%), Gaps = 2/76 (2%) Query: 52 QDIDLIMDIPVKLTVELGRTRMTIKELLRLTQGSVVALD-GLAGEPLDILINGYLIAQGE 110 +D+ + +P+ ++ E+GR + + L L GS++ LD L GE + IL N + GE Sbjct: 230 EDLHELDQLPIPVSFEVGRRTLDLHTLSTLQPGSLLDLDCALDGE-VRILANQRCLGIGE 288 Query: 111 VVVVADKYGVRITDII 126 +V + D+ GVR+T + Sbjct: 289 LVRLQDRLGVRVTRLF 304 >UniRef50_B3Q297 Type III secretion system translocation protein n=6 Tax=Rhizobium/Agrobacterium group RepID=B3Q297_RHIE6 Length = 339 Score = 40.8 bits (94), Expect = 0.014, Method: Compositional matrix adjust. Identities = 21/66 (31%), Positives = 37/66 (56%) Query: 60 IPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQGEVVVVADKYG 119 IP+KL + GR + ++ L + +G V LD + +DI+ G +I +GE++ V Sbjct: 272 IPIKLVFDAGRLELPLRALETIGEGYVFNLDRPLSDAVDIIAQGRIIGRGEIISVDGLSA 331 Query: 120 VRITDI 125 VR+T + Sbjct: 332 VRVTAL 337 >UniRef50_Q2RZE2 Flagellar motor switch protein FliM n=2 Tax=Rhodothermaceae RepID=Q2RZE2_SALRD Length = 372 Score = 40.8 bits (94), Expect = 0.015, Method: Compositional matrix adjust. Identities = 17/42 (40%), Positives = 27/42 (64%) Query: 62 VKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILING 103 V L+ ELGRT + + EL +L +G V+ LD +P+ + +NG Sbjct: 266 VNLSAELGRTVLPVTELAQLQEGDVIPLDRETDDPIKVFVNG 307 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_P15070 Flagellar motor switch protein fliN n=15 Tax=Pro... 199 2e-50 UniRef50_P26419 Flagellar motor switch protein fliN n=125 Tax=En... 191 7e-48 UniRef50_A4IMA6 Flagellar motor switch protein n=8 Tax=Firmicute... 145 4e-34 UniRef50_P35539 Flagellar motor switch protein fliN (Fragment) n... 144 6e-34 UniRef50_C7ILI0 CheC, inhibitor of MCP methylation / FliN fusion... 144 9e-34 UniRef50_Q47I10 Type III secretion system outer membrane O prote... 144 1e-33 UniRef50_Q2LT02 Flagellar motor switch protein n=2 Tax=Deltaprot... 143 1e-33 UniRef50_B0THB7 Flagellar motor switch protein flin, putative n=... 142 4e-33 UniRef50_D1B6B2 Flagellar motor switch protein FliN n=1 Tax=Ther... 142 4e-33 UniRef50_C6D2V9 CheC, inhibitor of MCP methylation / FliN fusion... 139 2e-32 UniRef50_B2S3V9 Flagellar motor switch protein n=2 Tax=Treponema... 138 5e-32 UniRef50_B1YI92 CheC, inhibitor of MCP methylation / FliN fusion... 138 5e-32 UniRef50_B8FTQ8 CheC, inhibitor of MCP methylation / FliN fusion... 138 5e-32 UniRef50_Q31FQ0 Flagellar motor switch protein FliN n=5 Tax=Gamm... 138 6e-32 UniRef50_Q0AYM4 CheC, inhibitor of MCP methylation n=5 Tax=Firmi... 137 9e-32 UniRef50_C0ZF88 Flagellar motor switch protein FliY n=1 Tax=Brev... 136 1e-31 UniRef50_Q0AEF2 Flagellar motor switch protein FliN n=12 Tax=Pro... 136 3e-31 UniRef50_A6LMJ7 CheC, inhibitor of MCP methylation n=4 Tax=Therm... 136 3e-31 UniRef50_D2LSG7 CheC, inhibitor of MCP methylation / FliN fusion... 134 6e-31 UniRef50_A1WGY8 Flagellar motor switch protein FliN n=19 Tax=Pro... 134 7e-31 UniRef50_B2A359 CheC, inhibitor of MCP methylation / FliN fusion... 134 8e-31 UniRef50_Q3SIG7 Flagellar motor switch/type III secretory pathwa... 134 8e-31 UniRef50_C6BUR6 Flagellar motor switch protein FliN n=21 Tax=Pro... 134 9e-31 UniRef50_C1TKI4 Flagellar motor switch protein FliN n=1 Tax=Deth... 134 1e-30 UniRef50_A3DCN7 CheC, inhibitor of MCP methylation n=2 Tax=Clost... 133 1e-30 UniRef50_Q2NX05 Flagellar motor switch protein FliN n=5 Tax=Ente... 132 3e-30 UniRef50_B8CYQ5 CheC, inhibitor of MCP methylation n=1 Tax=Halot... 132 3e-30 UniRef50_A8F896 Flagellar motor switch protein FliN n=3 Tax=Ther... 132 4e-30 UniRef50_C8WWF9 CheC, inhibitor of MCP methylation / FliN fusion... 132 4e-30 UniRef50_C9R9W6 CheC, inhibitor of MCP methylation / FliN fusion... 131 5e-30 UniRef50_D1C1A4 Flagellar motor switch protein FliN n=1 Tax=Spha... 131 9e-30 UniRef50_C5VT98 Flagellar motor switch phosphatase FliY n=1 Tax=... 131 9e-30 UniRef50_B5Y7F0 Flagellar motor switch phosphatase FliY (CheY-Pp... 131 9e-30 UniRef50_A4J737 CheC, inhibitor of MCP methylation n=1 Tax=Desul... 131 1e-29 UniRef50_C0R179 Flagellar motor switch protein n=2 Tax=Brachyspi... 130 1e-29 UniRef50_A5D0K1 Flagellum motor switch protein n=4 Tax=Bacteria ... 130 1e-29 UniRef50_A8U602 Flagellar motor switch protein n=5 Tax=Lactobaci... 129 2e-29 UniRef50_P24073 Flagellar motor switch phosphatase fliY n=8 Tax=... 129 2e-29 UniRef50_A5IJA7 CheC, inhibitor of MCP methylation n=5 Tax=Therm... 129 2e-29 UniRef50_Q6MI47 Flagellar motor switch protein FliN n=2 Tax=Delt... 129 2e-29 UniRef50_Q51466 Flagellar motor switch protein fliN n=23 Tax=Pro... 129 2e-29 UniRef50_B9PA59 Predicted protein n=2 Tax=cellular organisms Rep... 129 3e-29 UniRef50_B5YIZ3 Flagellar motor switch protein FliN n=1 Tax=Ther... 128 4e-29 UniRef50_A6TRP4 CheC, inhibitor of MCP methylation n=11 Tax=Clos... 128 7e-29 UniRef50_B0K9T5 CheC, inhibitor of MCP methylation / FliN fusion... 128 7e-29 UniRef50_C1I888 Flagellar switch protein FliY n=1 Tax=Clostridiu... 127 8e-29 UniRef50_B0MPD4 Putative uncharacterized protein n=1 Tax=Eubacte... 127 9e-29 UniRef50_C7R0I7 Flagellar motor switch protein FliN n=1 Tax=Jone... 127 9e-29 UniRef50_A6W8L1 Flagellar motor switch protein FliN n=1 Tax=Kine... 127 9e-29 UniRef50_Q3BU42 Flagellar motor switch/type III secretory pathwa... 126 2e-28 UniRef50_B8FK37 Flagellar motor switch protein FliN n=3 Tax=Bact... 126 2e-28 UniRef50_A6M1D2 CheC, inhibitor of MCP methylation n=24 Tax=Clos... 126 2e-28 UniRef50_A9BEY5 CheC, inhibitor of MCP methylation / FliN fusion... 126 3e-28 UniRef50_C4ZAN3 Flagellar motor switch protein n=2 Tax=Clostridi... 125 5e-28 UniRef50_Q30VB8 Surface presentation of antigens (SPOA) protein ... 124 9e-28 UniRef50_C8W1I6 CheC, inhibitor of MCP methylation / FliN fusion... 124 9e-28 UniRef50_C4Z5H2 Flagellar motor switch protein FliN/FliY n=3 Tax... 123 1e-27 UniRef50_Q0AA08 Flagellar motor switch protein FliN n=49 Tax=cel... 123 2e-27 UniRef50_C4G689 Putative uncharacterized protein n=1 Tax=Abiotro... 123 2e-27 UniRef50_B0P9X9 Putative uncharacterized protein n=1 Tax=Anaerot... 122 4e-27 UniRef50_A9KNE6 CheC, inhibitor of MCP methylation / FliN fusion... 121 8e-27 UniRef50_Q6AJS8 Probable flagellar motor switch protein (FliN) n... 120 1e-26 UniRef50_Q2RKB6 CheC, inhibitor of MCP methylation n=1 Tax=Moore... 120 1e-26 UniRef50_Q67K24 Flagellar motor switch protein n=1 Tax=Symbiobac... 120 1e-26 UniRef50_Q1NP93 Surface presentation of antigens (SPOA) protein ... 119 3e-26 UniRef50_B9L5A1 Flagellar motor switch phosphatase FliY (CheY-Pp... 119 3e-26 UniRef50_Q8D3E9 FliN protein n=3 Tax=Enterobacteriaceae RepID=Q8... 118 6e-26 UniRef50_C2ED81 Flagellar motor switch protein FliY n=1 Tax=Lact... 118 6e-26 UniRef50_Q3ADB7 Flagellar motor switch protein n=1 Tax=Carboxydo... 117 1e-25 UniRef50_B2V6S4 Flagellar motor switch protein FliN n=3 Tax=Sulf... 116 2e-25 UniRef50_A1SEN5 Flagellar motor switch protein FliN n=1 Tax=Noca... 116 2e-25 UniRef50_B4U6V5 Flagellar motor switch protein FliN n=1 Tax=Hydr... 116 3e-25 UniRef50_C1SNF8 Flagellar motor switch protein FliN n=1 Tax=Deni... 115 5e-25 UniRef50_D2R538 Flagellar motor switch protein FliN n=2 Tax=Plan... 114 9e-25 UniRef50_D0YPX2 Flagellar motor switch protein FliN n=2 Tax=Mobi... 113 1e-24 UniRef50_A8RWA3 Putative uncharacterized protein n=3 Tax=Clostri... 113 1e-24 UniRef50_C1ZEF0 Flagellar motor switch protein FliN n=1 Tax=Plan... 113 2e-24 UniRef50_A8RWD0 Putative uncharacterized protein n=3 Tax=Clostri... 113 2e-24 UniRef50_A6Q2L3 Flagellar motor switch protein FliN n=1 Tax=Nitr... 113 3e-24 UniRef50_D1BCL8 Flagellar motor switch protein FliN n=1 Tax=Sang... 113 3e-24 UniRef50_A0LT68 Flagellar motor switch protein FliN n=1 Tax=Acid... 113 3e-24 UniRef50_C0GJF1 Flagellar motor switch protein FliN n=1 Tax=Deth... 112 3e-24 UniRef50_Q01PP4 Flagellar motor switch protein FliN n=1 Tax=Cand... 112 3e-24 UniRef50_Q1Q6T3 Strong similar to flagellar motor switch protein... 112 5e-24 UniRef50_D0MGA9 Flagellar motor switch protein FliN n=1 Tax=Rhod... 111 7e-24 UniRef50_A7GZX6 Iron chelatin ABC transporter, substrate binding... 111 7e-24 UniRef50_Q7ULU7 Flagellar motor switch protein fliN n=1 Tax=Rhod... 111 8e-24 UniRef50_B8HEJ4 Flagellar motor switch protein FliN n=1 Tax=Arth... 111 9e-24 UniRef50_C2BUL2 Flagellar motor switch protein FliN n=1 Tax=Mobi... 111 1e-23 UniRef50_A9HHD1 Flagellar motor switch protein FliN n=2 Tax=Rhod... 111 1e-23 UniRef50_A4A5Y8 Flagellar motor switch protein fliN n=3 Tax=uncl... 111 1e-23 UniRef50_Q2RZE3 Possible flagellar motor switch FliN n=1 Tax=Sal... 111 1e-23 UniRef50_B6BN04 Flagellar motor switch FliN n=1 Tax=Campylobacte... 111 1e-23 UniRef50_Q4JMS2 Predicted flagellar motor switch protein n=3 Tax... 109 2e-23 UniRef50_C3XES1 Flagellar motor switch protein FliY n=1 Tax=Heli... 109 2e-23 UniRef50_Q04RL4 Endoflagellar motor switch protein n=6 Tax=Lepto... 109 2e-23 UniRef50_A0LDK9 Flagellar motor switch protein FliN n=1 Tax=Magn... 109 2e-23 UniRef50_C6WJP8 Flagellar motor switch protein FliN n=1 Tax=Acti... 109 3e-23 UniRef50_Q30SP4 Flagellar motor switch FliN n=1 Tax=Sulfurimonas... 109 3e-23 UniRef50_UPI0001C312B0 flagellar motor switch protein FliN n=1 T... 109 4e-23 UniRef50_Q2RKD7 Flagellar motor switch FliN n=1 Tax=Moorella the... 108 4e-23 UniRef50_C1F999 Putative flagellar motor switch protein FliN n=1... 108 5e-23 UniRef50_B9KJD9 Flagellar switch protein n=5 Tax=Rhodobacter sph... 108 5e-23 UniRef50_C0QPC5 Flagellar motor switch protein FliN n=2 Tax=Aqui... 108 6e-23 UniRef50_C2KZ02 Possible flagellar motor switch protein FliY n=1... 107 1e-22 UniRef50_D2S982 Flagellar motor switch protein FliN n=1 Tax=Geod... 106 2e-22 UniRef50_Q44903 Flagellar motor switch protein fliN n=21 Tax=Spi... 106 2e-22 UniRef50_A1QZ73 Flagellar motor switch protein FliN n=7 Tax=Spir... 106 2e-22 UniRef50_C0C1N9 Putative uncharacterized protein n=1 Tax=Clostri... 106 2e-22 UniRef50_Q89AZ3 Flagellar motor switch protein fliN n=1 Tax=Buch... 106 2e-22 UniRef50_C7M222 Flagellar motor switch protein FliN n=1 Tax=Acid... 105 4e-22 UniRef50_B9L5V0 Flagellar protein FliY n=1 Tax=Nautilia profundi... 105 4e-22 UniRef50_Q07SI0 Flagellar motor switch protein FliN n=7 Tax=Alph... 105 5e-22 UniRef50_Q1GNY9 Flagellar motor switch FliN n=2 Tax=Sphingomonad... 105 5e-22 UniRef50_Q17WT1 Flagellar motor switch protein n=8 Tax=Campyloba... 104 6e-22 UniRef50_B2USQ1 Flagellar motor switch protein FliY n=14 Tax=Hel... 104 7e-22 UniRef50_C1A552 Flagellar motor switch protein FliN n=1 Tax=Gemm... 104 8e-22 UniRef50_A5V6A7 Flagellar motor switch protein FliN n=4 Tax=Sphi... 104 9e-22 UniRef50_B1I5E1 Surface presentation of antigens (SPOA) protein ... 104 9e-22 UniRef50_A8UW94 Flagellar motor switch FliN n=1 Tax=Hydrogenivir... 104 9e-22 UniRef50_B1LV08 Flagellar motor switch protein FliN n=1 Tax=Meth... 104 9e-22 UniRef50_D1B0L6 Flagellar motor switch protein FliN n=1 Tax=Sulf... 104 1e-21 UniRef50_Q2WA21 Flagellar motor switch/type III secretory pathwa... 103 2e-21 UniRef50_A1UTV7 Flagellar motor switch protein fliY n=35 Tax=Rhi... 103 2e-21 UniRef50_B9JRN7 Flagellar motor switch protein FliN n=2 Tax=Rhiz... 103 2e-21 UniRef50_B1ZL53 Flagellar motor switch protein FliN n=6 Tax=Rhiz... 103 2e-21 UniRef50_A6DBQ2 Flagellar motor switch protein n=1 Tax=Caminibac... 103 2e-21 UniRef50_Q03593 Flagellar motor switch protein fliN n=21 Tax=Alp... 103 3e-21 UniRef50_C0GJF0 CheC, inhibitor of MCP methylation / FliN fusion... 102 3e-21 UniRef50_C6NYG7 Flagellar motor switch protein FliN n=1 Tax=Acid... 102 3e-21 UniRef50_Q0EZ61 Flagellar protein n=1 Tax=Mariprofundus ferrooxy... 101 5e-21 UniRef50_A4SI07 Lateral flagellar motor switch protein, lfiN n=2... 101 7e-21 UniRef50_A6CER1 Flagellar motor switch protein fliN n=1 Tax=Plan... 101 7e-21 UniRef50_D0I457 Flagellar motor switch protein FliN n=2 Tax=Vibr... 100 1e-20 UniRef50_B6QZA8 Flagellar motor switch protein n=1 Tax=Pseudovib... 99 2e-20 UniRef50_A5FYJ9 Flagellar motor switch protein FliN n=17 Tax=Alp... 99 2e-20 UniRef50_Q57259 Flagellar motor switch protein fliN n=2 Tax=Rhiz... 99 4e-20 UniRef50_B6IW97 Flagellar motor switch protein FliN n=1 Tax=Rhod... 98 7e-20 UniRef50_A5P6I8 Flagellar motor switch protein n=1 Tax=Erythroba... 98 9e-20 UniRef50_B6R821 Flagellar motor switch protein FliN n=2 Tax=Rhod... 98 1e-19 UniRef50_A6F9R7 Flagellar motor switch protein n=1 Tax=Moritella... 97 1e-19 UniRef50_O54245 Flagellar motor switch protein fliN n=15 Tax=Rhi... 97 2e-19 UniRef50_A7K1M2 Flagellar motor switch protein FliN n=17 Tax=Vib... 97 2e-19 UniRef50_B6IQ95 Flagellar motor switch protein FliN n=1 Tax=Rhod... 97 2e-19 UniRef50_Q0G104 Flagellar motor switch FliN protein:Surface pres... 97 2e-19 UniRef50_B8EL08 Flagellar motor switch protein FliN n=2 Tax=Beij... 96 2e-19 UniRef50_A4Y0Q2 Flagellar motor switch protein FliN n=1 Tax=Pseu... 96 2e-19 UniRef50_C8W1G7 Surface presentation of antigens (SPOA) protein ... 96 3e-19 UniRef50_B1ZR34 Flagellar motor switch protein FliN n=3 Tax=Verr... 95 5e-19 UniRef50_A1RF65 Flagellar motor switch protein FliN n=8 Tax=Shew... 95 6e-19 UniRef50_Q11LL6 Flagellar motor switch protein FliN n=3 Tax=Phyl... 95 8e-19 UniRef50_A4THZ3 Flagellar switch protein n=26 Tax=Enterobacteria... 95 8e-19 UniRef50_C0GJH0 Surface presentation of antigens (SPOA) protein ... 95 1e-18 UniRef50_A7H064 Flagellar motor switch protein FliN n=8 Tax=Epsi... 95 1e-18 UniRef50_A1T0L0 Surface presentation of antigens (SPOA) protein ... 94 1e-18 UniRef50_C5JB71 Flagellar motor switch/type III secretory pathwa... 94 1e-18 UniRef50_D1AZW0 Surface presentation of antigens (SPOA) protein ... 94 1e-18 UniRef50_A5D0I4 Flagellar motor switch/type III secretory pathwa... 94 1e-18 UniRef50_Q30RD7 Surface presentation of antigens (SPOA) protein ... 93 2e-18 UniRef50_C6XFK8 Putative flagellar motor switch protein n=1 Tax=... 93 2e-18 UniRef50_Q7UIS4 Probable flagellar motor switch protein fliN [Fr... 93 3e-18 UniRef50_C9PEF6 Flagellar motor switch protein FliN n=1 Tax=Vibr... 93 3e-18 UniRef50_Q18D12 Putative flagellar motor switch protein n=3 Tax=... 93 3e-18 UniRef50_A3SFT8 Surface presentation of antigens (SPOA) protein ... 93 3e-18 UniRef50_Q6MBC5 Putative flagellar motor switch protein (= type ... 92 4e-18 UniRef50_Q1D9K8 Type III secretion system apparatus protein YscQ... 92 5e-18 UniRef50_A8AKJ4 Putative uncharacterized protein n=1 Tax=Citroba... 92 5e-18 UniRef50_B9Z4S4 Flagellar motor switch protein FliN n=1 Tax=Luti... 92 5e-18 UniRef50_A6CBY5 Probable flagellar motor switch protein fliN n=1... 92 6e-18 UniRef50_C9R9Y4 Surface presentation of antigens (SPOA) protein ... 91 9e-18 UniRef50_P57183 Flagellar motor switch protein fliN n=3 Tax=Buch... 91 9e-18 UniRef50_A8EW52 Flagellar motor switch protein FliY n=1 Tax=Arco... 91 1e-17 UniRef50_A5KY22 Flagellar motor switch protein n=2 Tax=Vibrional... 91 1e-17 UniRef50_D1R7U0 Putative type III secretion system protein n=1 T... 91 1e-17 UniRef50_Q058C3 Flagellar motor switch protein, C-ring protein n... 91 1e-17 UniRef50_B1K3A4 Flagellar motor switch protein FliN n=1 Tax=Burk... 90 2e-17 UniRef50_Q3ADD4 Flagellar motor switch protein FliN n=1 Tax=Carb... 90 2e-17 UniRef50_Q1CTU2 Flagellar switch protein n=20 Tax=Helicobacterac... 90 2e-17 UniRef50_Q67MU5 Putative uncharacterized protein n=1 Tax=Symbiob... 89 4e-17 UniRef50_A3ZT50 Probable flagellar motor switch protein fliN n=1... 88 9e-17 UniRef50_Q2CGH8 Flagellar motor switch protein FliN n=3 Tax=Rhod... 88 9e-17 UniRef50_C1ZEH8 Flagellar motor switch/type III secretory pathwa... 88 9e-17 UniRef50_C3XFR2 Flagellar motor switch protein FliN n=1 Tax=Heli... 88 1e-16 UniRef50_D2LD12 Surface presentation of antigens (SPOA) protein ... 88 1e-16 UniRef50_A4U4R5 Surface presentation of antigens (SPOA) protein ... 87 2e-16 UniRef50_A3WGR5 Flagellar motor switch protein n=1 Tax=Erythroba... 87 2e-16 UniRef50_Q1IR54 Surface presentation of antigens (SPOA) protein ... 86 2e-16 UniRef50_O67495 Flagellar motor switch protein fliN n=1 Tax=Aqui... 86 3e-16 UniRef50_A7K019 Type III secretion inner membrane protein YscQ n... 86 4e-16 UniRef50_Q0C2D2 Flagellar motor switch protein FliN n=1 Tax=Hyph... 86 5e-16 UniRef50_A9DR59 Flagellar motor switch protein n=1 Tax=Oceanibul... 85 5e-16 UniRef50_C6N6Z9 Putative surface presentation of antigens (SPOA)... 85 6e-16 UniRef50_B8DI82 Flagellar motor switch protein n=20 Tax=Listeria... 85 6e-16 UniRef50_Q2NR65 Type III secretion apparatus SpaO n=2 Tax=Sodali... 85 8e-16 UniRef50_Q1IR63 Flagellar motor switch FliN n=1 Tax=Candidatus K... 85 1e-15 UniRef50_Q01PQ3 Surface presentation of antigens (SPOA) protein ... 85 1e-15 UniRef50_Q8KA38 Flagellar motor switch protein fliN n=1 Tax=Buch... 84 1e-15 UniRef50_D2R2R8 Surface presentation of antigens (SPOA) protein ... 84 1e-15 UniRef50_C5CYF0 Surface presentation of antigens (SPOA) protein ... 84 2e-15 UniRef50_A4J755 Surface presentation of antigens (SPOA) protein ... 84 2e-15 UniRef50_Q5DY32 Lateral flagellar export/assembly protein (FliN-... 84 2e-15 UniRef50_C3KNB2 Type III secretion system translocation protein,... 84 2e-15 UniRef50_C7DF35 Flagellar motor switch protein FliN n=1 Tax=Thal... 83 3e-15 UniRef50_C1SLE0 Flagellar motor switch/type III secretory pathwa... 83 3e-15 UniRef50_UPI0001AF390C type III secretion component, putative n=... 83 3e-15 UniRef50_UPI0001C312B8 CheC, inhibitor of MCP methylation n=1 Ta... 83 4e-15 UniRef50_A3NFV2 Flagellar motor switch/type III secretory pathwa... 82 6e-15 UniRef50_B1LY10 Surface presentation of antigens (SPOA) protein ... 81 7e-15 UniRef50_B1TBB1 Surface presentation of antigens (SPOA) protein ... 81 8e-15 UniRef50_Q0ANV1 Surface presentation of antigens (SPOA) protein ... 81 9e-15 UniRef50_Q11M61 Surface presentation of antigens (SPOA) protein ... 81 9e-15 UniRef50_A6Q2N5 Flagellar motor switch protein FliN/FliY n=1 Tax... 81 1e-14 UniRef50_A9APA9 Type III secretion system apparatus protein YscQ... 81 1e-14 UniRef50_Q2RPI0 Surface presentation of antigens (SPOA) protein ... 81 1e-14 UniRef50_UPI00016C4201 hypothetical protein GobsU_09164 n=1 Tax=... 81 2e-14 UniRef50_Q2SH51 Flagellar motor switch/type III secretory pathwa... 80 2e-14 UniRef50_C0QPA3 Flagellar motor switch phosphatase FliY n=1 Tax=... 79 3e-14 UniRef50_Q2SEZ2 Flagellar motor switch protein n=1 Tax=Hahella c... 79 5e-14 UniRef50_Q48IQ1 Type III secretion component, putative n=1 Tax=P... 79 5e-14 UniRef50_Q0C5L8 Putative flagellar motor switch protein FliN n=1... 78 6e-14 UniRef50_A7GNF7 CheC, inhibitor of MCP methylation n=70 Tax=Baci... 78 8e-14 UniRef50_A0NWB8 Putative uncharacterized protein n=3 Tax=Rhodoba... 78 8e-14 UniRef50_B4R925 FliN family protein n=8 Tax=Alphaproteobacteria ... 77 1e-13 UniRef50_D2TZ40 Type III secretion apparatus protein YscQ,HrcQ,S... 77 2e-13 UniRef50_A7HWV0 Surface presentation of antigens (SPOA) protein ... 77 2e-13 UniRef50_A8EW59 Flagellar motor switch protein FliN n=1 Tax=Arco... 77 2e-13 UniRef50_B6WRL8 Putative uncharacterized protein n=1 Tax=Desulfo... 76 3e-13 UniRef50_A0RC99 Flagellar motor switch protein N n=71 Tax=Bacill... 76 4e-13 UniRef50_B6IT07 Flagellar motor switch protein FliN n=2 Tax=Rhod... 76 4e-13 UniRef50_B8CYQ6 Flagellar motor switch protein FliM n=1 Tax=Halo... 76 5e-13 UniRef50_Q18CW8 Flagellar motor switch protein n=5 Tax=Clostridi... 72 4e-12 UniRef50_A4J3G9 CheC, inhibitor of MCP methylation n=2 Tax=Desul... 72 6e-12 UniRef50_B0K1R9 Flagellar motor switch protein FliM n=14 Tax=Clo... 71 1e-11 UniRef50_A8LMS4 Flagellar motor switch protein FliN n=5 Tax=Rhod... 70 2e-11 Sequences not found previously or not previously below threshold: UniRef50_UPI0001744A0D type III secretion system protein n=1 Tax... 76 3e-13 UniRef50_C0AR55 Putative uncharacterized protein n=1 Tax=Proteus... 76 5e-13 UniRef50_B1FB78 Type III secretion system apparatus protein YscQ... 73 3e-12 UniRef50_Q02KI5 Translocation protein in type III secretion n=5 ... 73 4e-12 UniRef50_Q1GCD9 Flagellar motor switch protein fliN n=20 Tax=Rho... 70 2e-11 UniRef50_P42713 Yop proteins translocation protein Q n=21 Tax=Ye... 69 3e-11 UniRef50_B3RAD9 SctQ: non flagellar T3S system conserved protein... 69 4e-11 UniRef50_D1B6B3 Flagellar motor switch protein FliM n=1 Tax=Ther... 69 5e-11 UniRef50_B3Q297 Type III secretion system translocation protein ... 67 1e-10 UniRef50_P55719 Probable translocation protein y4yK n=5 Tax=Rhiz... 67 2e-10 UniRef50_Q7NUS2 Surface presentation of antigens; secretory prot... 67 2e-10 UniRef50_P74860 Secretion system apparatus protein ssaQ n=37 Tax... 66 3e-10 UniRef50_UPI00019F17D0 translocation protein in type III secreti... 65 5e-10 UniRef50_B8DI89 Flagellar motor switch protein n=17 Tax=Listeria... 65 7e-10 UniRef50_B2V6Q2 Surface presentation of antigens (SPOA) protein ... 65 7e-10 UniRef50_B1K4V5 Type III secretion system apparatus protein YscQ... 64 1e-09 >UniRef50_P15070 Flagellar motor switch protein fliN n=15 Tax=Proteobacteria RepID=FLIN_ECOLI Length = 137 Score = 199 bits (507), Expect = 2e-50, Method: Composition-based stats. Identities = 137/137 (100%), Positives = 137/137 (100%) Query: 1 MSDMNNPADDNNGAMDDLWAEALSEQKSTSSKSAAETVFQQFGGGDVSGTLQDIDLIMDI 60 MSDMNNPADDNNGAMDDLWAEALSEQKSTSSKSAAETVFQQFGGGDVSGTLQDIDLIMDI Sbjct: 1 MSDMNNPADDNNGAMDDLWAEALSEQKSTSSKSAAETVFQQFGGGDVSGTLQDIDLIMDI 60 Query: 61 PVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQGEVVVVADKYGV 120 PVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQGEVVVVADKYGV Sbjct: 61 PVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQGEVVVVADKYGV 120 Query: 121 RITDIITPSERMRRLSR 137 RITDIITPSERMRRLSR Sbjct: 121 RITDIITPSERMRRLSR 137 >UniRef50_P26419 Flagellar motor switch protein fliN n=125 Tax=Enterobacteriaceae RepID=FLIN_SALTY Length = 137 Score = 191 bits (485), Expect = 7e-48, Method: Composition-based stats. Identities = 123/137 (89%), Positives = 133/137 (97%) Query: 1 MSDMNNPADDNNGAMDDLWAEALSEQKSTSSKSAAETVFQQFGGGDVSGTLQDIDLIMDI 60 MSDMNNP+D+N GA+DDLWA+AL+EQK+T++KSAA+ VFQQ GGGDVSG +QDIDLIMDI Sbjct: 1 MSDMNNPSDENTGALDDLWADALNEQKATTTKSAADAVFQQLGGGDVSGAMQDIDLIMDI 60 Query: 61 PVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQGEVVVVADKYGV 120 PVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQGEVVVVADKYGV Sbjct: 61 PVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQGEVVVVADKYGV 120 Query: 121 RITDIITPSERMRRLSR 137 RITDIITPSERMRRLSR Sbjct: 121 RITDIITPSERMRRLSR 137 >UniRef50_A4IMA6 Flagellar motor switch protein n=8 Tax=Firmicutes RepID=A4IMA6_GEOTN Length = 393 Score = 145 bits (367), Expect = 4e-34, Method: Composition-based stats. Identities = 54/147 (36%), Positives = 95/147 (64%), Gaps = 13/147 (8%) Query: 3 DMNNPADDNNGAMDDLWAEALS------------EQKSTSSKSAAETVFQQFGGGDVSGT 50 + PA A D +++ A S E++S + + F +F ++ T Sbjct: 247 EEPQPAPAYAHASDGVFSSAASRFTNETVGGRSKEEESVAERHIQAADFAEFDDPPLAAT 306 Query: 51 -LQDIDLIMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQG 109 ++++L+ D+P+++TVELGRT+ +++E+L+L+ GS++ LD LAGEP+DI +N LIA+G Sbjct: 307 EARNLELLFDVPLQVTVELGRTKRSVQEILQLSAGSIIELDKLAGEPVDIFVNNKLIAKG 366 Query: 110 EVVVVADKYGVRITDIITPSERMRRLS 136 EVVV+ + +GVRITDI++ ++R++RL Sbjct: 367 EVVVIDENFGVRITDIVSQNDRLKRLK 393 >UniRef50_P35539 Flagellar motor switch protein fliN (Fragment) n=77 Tax=Proteobacteria RepID=FLIN_PECCC Length = 106 Score = 144 bits (365), Expect = 6e-34, Method: Composition-based stats. Identities = 89/106 (83%), Positives = 95/106 (89%) Query: 32 KSAAETVFQQFGGGDVSGTLQDIDLIMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDG 91 + E +F+ G D G LQDIDLI+DIPVKLTVELGRT+MTIKELLRLTQGSVVALDG Sbjct: 1 RPTTEGIFKSLDGHDPLGALQDIDLILDIPVKLTVELGRTKMTIKELLRLTQGSVVALDG 60 Query: 92 LAGEPLDILINGYLIAQGEVVVVADKYGVRITDIITPSERMRRLSR 137 LAGEPLDILINGYLIAQGEVVVV+DKYGVRITDIITPSERMRRLSR Sbjct: 61 LAGEPLDILINGYLIAQGEVVVVSDKYGVRITDIITPSERMRRLSR 106 >UniRef50_C7ILI0 CheC, inhibitor of MCP methylation / FliN fusion protein n=3 Tax=Clostridiales RepID=C7ILI0_9CLOT Length = 400 Score = 144 bits (363), Expect = 9e-34, Method: Composition-based stats. Identities = 56/109 (51%), Positives = 76/109 (69%) Query: 24 SEQKSTSSKSAAETVFQQFGGGDVSGTLQDIDLIMDIPVKLTVELGRTRMTIKELLRLTQ 83 Q+ S S FQ F G + ++I LIMD+P+++TVELGRT+ IK++L Sbjct: 292 EPQRQRSPVSVQPVQFQAFDDGLSATEKKNISLIMDLPLQVTVELGRTQKLIKDILEFGS 351 Query: 84 GSVVALDGLAGEPLDILINGYLIAQGEVVVVADKYGVRITDIITPSERM 132 GSV+ LD LAGEP+DIL+NG IA+GEVVV+ + +GVRITDII PS+R+ Sbjct: 352 GSVIELDKLAGEPVDILVNGKAIAKGEVVVIDESFGVRITDIIHPSKRL 400 >UniRef50_Q47I10 Type III secretion system outer membrane O protein n=57 Tax=Proteobacteria RepID=Q47I10_DECAR Length = 147 Score = 144 bits (363), Expect = 1e-33, Method: Composition-based stats. Identities = 74/139 (53%), Positives = 104/139 (74%), Gaps = 5/139 (3%) Query: 4 MNNPADDNNGAMDDLWAEALSEQKSTSSKSAAE----TVFQQFGG-GDVSGTLQDIDLIM 58 + P +D+ +D WA A+SEQ + + +A +F FGG +G + ++D+I+ Sbjct: 9 ESTPVEDDGQISEDDWAAAMSEQAISDAPAAMAAQPADIFPSFGGNAGNAGMMNELDMIL 68 Query: 59 DIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQGEVVVVADKY 118 DIPV++TVELGRT++TIK LL+L GSVV LD +AGEP+D+++NG LIAQGEVVVV DK+ Sbjct: 69 DIPVQITVELGRTKITIKNLLQLAHGSVVELDAMAGEPMDVMVNGTLIAQGEVVVVNDKF 128 Query: 119 GVRITDIITPSERMRRLSR 137 G+R+TDIITPSERMR+L+R Sbjct: 129 GIRLTDIITPSERMRKLNR 147 >UniRef50_Q2LT02 Flagellar motor switch protein n=2 Tax=Deltaproteobacteria RepID=Q2LT02_SYNAS Length = 163 Score = 143 bits (362), Expect = 1e-33, Method: Composition-based stats. Identities = 58/129 (44%), Positives = 85/129 (65%) Query: 8 ADDNNGAMDDLWAEALSEQKSTSSKSAAETVFQQFGGGDVSGTLQDIDLIMDIPVKLTVE 67 +DD+N +D+ E Q T + F++ G D+D I+DIP+ L+VE Sbjct: 35 SDDDNFGWEDVKEELAQSQVKTPKVEVSPADFKEIPAGPKMDPQLDLDFILDIPLTLSVE 94 Query: 68 LGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQGEVVVVADKYGVRITDIIT 127 LGR RM I ELL+L QGS++ L LAGEP+D+ +N LIA+GEVVVV +K+G+R+TDI++ Sbjct: 95 LGRCRMLISELLQLGQGSIIELVKLAGEPMDVYVNQRLIARGEVVVVNEKFGIRLTDIVS 154 Query: 128 PSERMRRLS 136 P+ER+ +L Sbjct: 155 PAERVNKLR 163 >UniRef50_B0THB7 Flagellar motor switch protein flin, putative n=5 Tax=Bacteria RepID=B0THB7_HELMI Length = 375 Score = 142 bits (358), Expect = 4e-33, Method: Composition-based stats. Identities = 50/97 (51%), Positives = 71/97 (73%) Query: 39 FQQFGGGDVSGTLQDIDLIMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLD 98 F ++ LIMD+P+++TVELG++R TI+++L L GSV+ LD LAGEP+D Sbjct: 278 FAPLQPQRSGKDTTNLGLIMDVPLQVTVELGKSRKTIRDILDLGPGSVIELDKLAGEPVD 337 Query: 99 ILINGYLIAQGEVVVVADKYGVRITDIITPSERMRRL 135 IL+NG LIA+GEVVV+ + +GVRITDI++P ER+ L Sbjct: 338 ILVNGKLIAKGEVVVIDENFGVRITDIVSPIERIGNL 374 >UniRef50_D1B6B2 Flagellar motor switch protein FliN n=1 Tax=Thermanaerovibrio acidaminovorans DSM 6589 RepID=D1B6B2_THEAS Length = 375 Score = 142 bits (358), Expect = 4e-33, Method: Composition-based stats. Identities = 57/121 (47%), Positives = 84/121 (69%) Query: 16 DDLWAEALSEQKSTSSKSAAETVFQQFGGGDVSGTLQDIDLIMDIPVKLTVELGRTRMTI 75 D+ + S ST+ F GG +V+ + IDLI DIPV++TVELGRTR TI Sbjct: 254 DEGFYAPRSASISTAPVDVRPAEFAPLGGQEVAISASAIDLISDIPVRITVELGRTRKTI 313 Query: 76 KELLRLTQGSVVALDGLAGEPLDILINGYLIAQGEVVVVADKYGVRITDIITPSERMRRL 135 E+L ++ GSVV L+ +AGEP+D+L+NG LIA+GEVVV+ + +GVR+T+I++ +ER+R + Sbjct: 314 GEILNMSPGSVVELNRMAGEPVDVLVNGKLIARGEVVVIDENFGVRVTEIVSRAERIRSM 373 Query: 136 S 136 Sbjct: 374 G 374 >UniRef50_C6D2V9 CheC, inhibitor of MCP methylation / FliN fusion protein n=15 Tax=Bacteria RepID=C6D2V9_PAESJ Length = 421 Score = 139 bits (352), Expect = 2e-32, Method: Composition-based stats. Identities = 51/137 (37%), Positives = 85/137 (62%), Gaps = 3/137 (2%) Query: 2 SDMNNPADDNNGAMDDLWAEALSEQKSTSSKSA--AETVFQQFGGGD-VSGTLQDIDLIM 58 + NP + + + ++++ F F V +++L++ Sbjct: 284 NQPYNPYQQSAAFDIQMQPQGPQTYGHAANRNVNVQPVQFANFNQAPYVQTDETNLNLLL 343 Query: 59 DIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQGEVVVVADKY 118 DIP+K+TVELGRT+ IK++L L+QGS++ LD LAGEP+DIL+N LIA+GEVVV+ + + Sbjct: 344 DIPLKVTVELGRTQKQIKDILELSQGSIIELDKLAGEPVDILVNNKLIAKGEVVVIDENF 403 Query: 119 GVRITDIITPSERMRRL 135 GVR+TDI++ +R+++L Sbjct: 404 GVRVTDIVSQWDRIQKL 420 >UniRef50_B2S3V9 Flagellar motor switch protein n=2 Tax=Treponema pallidum RepID=B2S3V9_TREPS Length = 348 Score = 138 bits (349), Expect = 5e-32, Method: Composition-based stats. Identities = 50/129 (38%), Positives = 75/129 (58%), Gaps = 2/129 (1%) Query: 4 MNNPADDNNGAMDDLWAEALSEQKSTSSKSAAETVFQQFGGGDVSGTLQDIDLIMDIPVK 63 M P + + +S S F +I LIMD+ ++ Sbjct: 219 MQRPQAQVGNSQMG--GVNMQMGIGAASPSVQSVQFHPLQNAAGGAEQGNIGLIMDVFME 276 Query: 64 LTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQGEVVVVADKYGVRIT 123 +TVELGRTRM IK++L + +G ++ LD LAGEP+DIL+N LIA+GEVVV+ + +GVR+T Sbjct: 277 VTVELGRTRMMIKDILGMGEGHIIELDKLAGEPVDILVNHKLIAKGEVVVIDENFGVRVT 336 Query: 124 DIITPSERM 132 +I++P ER+ Sbjct: 337 EILSPGERI 345 >UniRef50_B1YI92 CheC, inhibitor of MCP methylation / FliN fusion protein n=2 Tax=Exiguobacterium RepID=B1YI92_EXIS2 Length = 376 Score = 138 bits (348), Expect = 5e-32, Method: Composition-based stats. Identities = 54/134 (40%), Positives = 78/134 (58%), Gaps = 4/134 (2%) Query: 5 NNPADDNNGAMDDLWA---EALSEQKSTSSKSAAETVFQQFGGGDVSGTLQDIDLIMDIP 61 P + A EA EQK + F QF G +I ++ D+P Sbjct: 244 QEPVREQPTAPQQQPEPRYEAPPEQKK-EPVGVSPVQFGQFSEVQQEGPPGNIGMLYDVP 302 Query: 62 VKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQGEVVVVADKYGVR 121 + +TVELGRTR +++++L LTQGS++ LD LAGEP+D+ +N LIA GEVVV+ + +GVR Sbjct: 303 LNVTVELGRTRRSVRDILELTQGSIIELDKLAGEPVDVFVNNTLIATGEVVVIEENFGVR 362 Query: 122 ITDIITPSERMRRL 135 IT+I+ ER+R Sbjct: 363 ITEIVNTKERLRMF 376 >UniRef50_B8FTQ8 CheC, inhibitor of MCP methylation / FliN fusion protein n=4 Tax=Bacteria RepID=B8FTQ8_DESHD Length = 417 Score = 138 bits (348), Expect = 5e-32, Method: Composition-based stats. Identities = 47/105 (44%), Positives = 72/105 (68%) Query: 30 SSKSAAETVFQQFGGGDVSGTLQDIDLIMDIPVKLTVELGRTRMTIKELLRLTQGSVVAL 89 F GD ++++LI+D+P++++VELG+ + TIKE+L L GSV+ L Sbjct: 308 PPTPVQPAQFVPLKPGDPLHGQENLELILDVPLQVSVELGKAKKTIKEILELGPGSVIEL 367 Query: 90 DGLAGEPLDILINGYLIAQGEVVVVADKYGVRITDIITPSERMRR 134 D LAGEP+D+++NG LIA+ EVVV+ + +G+RITDI+ P ERM + Sbjct: 368 DRLAGEPVDMIVNGKLIAKCEVVVINETFGIRITDIVQPGERMTK 412 >UniRef50_Q31FQ0 Flagellar motor switch protein FliN n=5 Tax=Gammaproteobacteria RepID=Q31FQ0_THICR Length = 153 Score = 138 bits (347), Expect = 6e-32, Method: Composition-based stats. Identities = 65/139 (46%), Positives = 94/139 (67%), Gaps = 5/139 (3%) Query: 3 DMNNPADDNNGAMDDLWAEALSEQK-STSSKSAAETVFQQFGGGDV----SGTLQDIDLI 57 D A+ ++ A DD W ALSEQ TSS ++ E F + S D+D++ Sbjct: 15 DEQAEAEGSDAAGDDPWGAALSEQAAETSSNNSDEIDAASFDALEKGRGDSSEKVDLDVL 74 Query: 58 MDIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQGEVVVVADK 117 +DIPV L +E+GR +++I+ LL TQGSV+ +D LAGEPLD+L+NG LIA GEVVV+ DK Sbjct: 75 LDIPVTLQLEIGRAKVSIRNLLSYTQGSVIEMDRLAGEPLDLLVNGTLIAHGEVVVINDK 134 Query: 118 YGVRITDIITPSERMRRLS 136 +GVR+TD+++P ER+++L Sbjct: 135 FGVRLTDVVSPQERIKKLK 153 >UniRef50_Q0AYM4 CheC, inhibitor of MCP methylation n=5 Tax=Firmicutes RepID=Q0AYM4_SYNWW Length = 398 Score = 137 bits (346), Expect = 9e-32, Method: Composition-based stats. Identities = 51/119 (42%), Positives = 81/119 (68%) Query: 17 DLWAEALSEQKSTSSKSAAETVFQQFGGGDVSGTLQDIDLIMDIPVKLTVELGRTRMTIK 76 + ++ E + + F ++ + Q++DLIMD+P+ ++VELG+T+ TI Sbjct: 279 QAFVQSPREMSNRPQFAVQPVQFAPLQESNMLHSPQNLDLIMDVPLDVSVELGKTKKTIG 338 Query: 77 ELLRLTQGSVVALDGLAGEPLDILINGYLIAQGEVVVVADKYGVRITDIITPSERMRRL 135 E+L L QG+++ LD LAGEP+D+L+NG LIA+GEVVV+ + YG+RIT II+P +RM +L Sbjct: 339 EILELNQGAIIQLDKLAGEPVDLLVNGKLIAKGEVVVIDENYGIRITTIISPIDRMNKL 397 >UniRef50_C0ZF88 Flagellar motor switch protein FliY n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0ZF88_BREBN Length = 455 Score = 136 bits (344), Expect = 1e-31, Method: Composition-based stats. Identities = 49/110 (44%), Positives = 80/110 (72%), Gaps = 1/110 (0%) Query: 27 KSTSSKSAAETVFQQFGGGDV-SGTLQDIDLIMDIPVKLTVELGRTRMTIKELLRLTQGS 85 + + + F GG + +G +Q+++L+ DIP+++TVELGRT+ I+E+L L+ GS Sbjct: 345 PAANQANVVPAQFAPLGGAPMYTGDIQNLNLLHDIPLQVTVELGRTKKLIREILDLSAGS 404 Query: 86 VVALDGLAGEPLDILINGYLIAQGEVVVVADKYGVRITDIITPSERMRRL 135 ++ LD LAGE +DIL+N LIA+GEVVV+ + +GVR+TDII+ +R+++L Sbjct: 405 IIQLDKLAGEHVDILVNNKLIAKGEVVVIDENFGVRVTDIISQIDRVQKL 454 >UniRef50_Q0AEF2 Flagellar motor switch protein FliN n=12 Tax=Proteobacteria RepID=Q0AEF2_NITEC Length = 157 Score = 136 bits (342), Expect = 3e-31, Method: Composition-based stats. Identities = 68/111 (61%), Positives = 90/111 (81%), Gaps = 1/111 (0%) Query: 28 STSSKSAAETVFQQFGGGDV-SGTLQDIDLIMDIPVKLTVELGRTRMTIKELLRLTQGSV 86 + +VF+QF +V + T DID+I+DIPV+LTVELGRTR+ IK LL+L QGSV Sbjct: 47 PDEDLTKPSSVFEQFSRNNVLNDTRNDIDMILDIPVQLTVELGRTRIAIKNLLQLAQGSV 106 Query: 87 VALDGLAGEPLDILINGYLIAQGEVVVVADKYGVRITDIITPSERMRRLSR 137 + LDG+AGEP+D+L+NG LIAQGEVVVV +K+G+R+TDIITPSER+R+L+R Sbjct: 107 IELDGMAGEPMDVLVNGCLIAQGEVVVVNEKFGIRLTDIITPSERIRKLNR 157 >UniRef50_A6LMJ7 CheC, inhibitor of MCP methylation n=4 Tax=Thermotogaceae RepID=A6LMJ7_THEM4 Length = 370 Score = 136 bits (342), Expect = 3e-31, Method: Composition-based stats. Identities = 51/134 (38%), Positives = 83/134 (61%), Gaps = 4/134 (2%) Query: 7 PADDNNGAMDDLWAEALSEQKSTSSKSAAETVFQQFGGGDV----SGTLQDIDLIMDIPV 62 P +++ +SE + S + FQ F G + S + I ++DIP+ Sbjct: 237 PQQAPTTENENIQNVKMSENIQKNPVSVSPVQFQSFESGGIVKSTSEIPERIKALLDIPL 296 Query: 63 KLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQGEVVVVADKYGVRI 122 + VELG+T++T+K+++ L+ GS++ LD L GEP+DI++NG LIA+GEVVV+ + +GVRI Sbjct: 297 NVVVELGKTKLTLKQVMELSVGSLIELDKLTGEPVDIIVNGKLIARGEVVVIDENFGVRI 356 Query: 123 TDIITPSERMRRLS 136 T+I++P ER L Sbjct: 357 TEIVSPQERFYTLE 370 >UniRef50_D2LSG7 CheC, inhibitor of MCP methylation / FliN fusion protein n=1 Tax=Bacillus cellulosilyticus DSM 2522 RepID=D2LSG7_BACS4 Length = 398 Score = 134 bits (339), Expect = 6e-31, Method: Composition-based stats. Identities = 51/131 (38%), Positives = 84/131 (64%), Gaps = 1/131 (0%) Query: 6 NPADDNNGAMDDLWAEALSEQKSTSSKSAAETVFQQFGGGDV-SGTLQDIDLIMDIPVKL 64 + + + A + + + S F F + + +++D+++DIP+++ Sbjct: 268 DATNQHQSARQEPQFVSNGSRLPDRSAEVQPAAFSNFETPQLGNNEAKNLDMLLDIPLEV 327 Query: 65 TVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQGEVVVVADKYGVRITD 124 TVELGRT+ +IK++L LTQGS++ LD LAGEP+DIL+N LIA+GEVVV+ + +GVR+TD Sbjct: 328 TVELGRTKRSIKDILELTQGSIIELDKLAGEPVDILVNQRLIAKGEVVVIDENFGVRVTD 387 Query: 125 IITPSERMRRL 135 I++ ER+ L Sbjct: 388 IVSKRERLNNL 398 >UniRef50_A1WGY8 Flagellar motor switch protein FliN n=19 Tax=Proteobacteria RepID=A1WGY8_VEREI Length = 163 Score = 134 bits (339), Expect = 7e-31, Method: Composition-based stats. Identities = 74/150 (49%), Positives = 96/150 (64%), Gaps = 17/150 (11%) Query: 5 NNPADDNNGAMDDLWAEALSEQKSTSSKSAAETVFQQFGGGDVSGTL------------- 51 PAD+ + WAEAL EQK + A G V L Sbjct: 13 GAPADNAADDPFNGWAEALKEQKRSDEPPAEGQQGGPLSGEPVRPPLAGAASGASAVNGG 72 Query: 52 ----QDIDLIMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIA 107 DI+ ++DIPV+L+VELGRT++ IK +L+L QGSVV LD LAGEP+D+L+NGYLIA Sbjct: 73 EQVINDINRVLDIPVQLSVELGRTKVPIKYILQLAQGSVVELDALAGEPMDVLVNGYLIA 132 Query: 108 QGEVVVVADKYGVRITDIITPSERMRRLSR 137 QGEVVVV DK+G+R+TD++TPSER+RR+SR Sbjct: 133 QGEVVVVNDKFGIRLTDVVTPSERLRRVSR 162 >UniRef50_B2A359 CheC, inhibitor of MCP methylation / FliN fusion protein n=5 Tax=Bacteria RepID=B2A359_NATTJ Length = 422 Score = 134 bits (338), Expect = 8e-31, Method: Composition-based stats. Identities = 50/112 (44%), Positives = 76/112 (67%) Query: 24 SEQKSTSSKSAAETVFQQFGGGDVSGTLQDIDLIMDIPVKLTVELGRTRMTIKELLRLTQ 83 EQ+ E + G +I+LIMD+P+++TVELG+T+ I+E+L L Sbjct: 310 QEQQPKKDYQPVEFSPLEGHQSAAKGENSNIELIMDVPLEVTVELGQTKKKIQEILELVP 369 Query: 84 GSVVALDGLAGEPLDILINGYLIAQGEVVVVADKYGVRITDIITPSERMRRL 135 GS++ LD +AGEP+DI +NG LIA+GEVVV+ + +G+RIT+II+P ER+ +L Sbjct: 370 GSIIELDKIAGEPVDIKVNGKLIAKGEVVVIDENFGIRITEIISPVERINKL 421 >UniRef50_Q3SIG7 Flagellar motor switch/type III secretory pathway protein FliN n=17 Tax=Proteobacteria RepID=Q3SIG7_THIDA Length = 132 Score = 134 bits (338), Expect = 8e-31, Method: Composition-based stats. Identities = 68/101 (67%), Positives = 85/101 (84%), Gaps = 1/101 (0%) Query: 38 VFQQFGGGDVS-GTLQDIDLIMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEP 96 +F++F G S G DID I+DIPV LTVELGRT++ IK LL+L QGSVV LDGLAGEP Sbjct: 32 IFKEFSGSASSTGLANDIDFILDIPVLLTVELGRTKIAIKNLLQLAQGSVVELDGLAGEP 91 Query: 97 LDILINGYLIAQGEVVVVADKYGVRITDIITPSERMRRLSR 137 +D+L+NG LIAQGEVVVV DK+GVR+TDIITP+ER+R+L++ Sbjct: 92 MDVLVNGCLIAQGEVVVVNDKFGVRLTDIITPAERIRKLNK 132 >UniRef50_C6BUR6 Flagellar motor switch protein FliN n=21 Tax=Proteobacteria RepID=C6BUR6_DESAD Length = 229 Score = 134 bits (337), Expect = 9e-31, Method: Composition-based stats. Identities = 55/132 (41%), Positives = 80/132 (60%), Gaps = 14/132 (10%) Query: 19 WAEALSEQKSTSSKSAAETVF--------------QQFGGGDVSGTLQDIDLIMDIPVKL 64 WA AL+E + E F + G+ +D+D I+DIP+ + Sbjct: 98 WAAALAEDTGDDIRKEKEQEFLRTQTRDADFKDLTNEAKNPRHDGSRRDLDFILDIPLDV 157 Query: 65 TVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQGEVVVVADKYGVRITD 124 + ELGR +M I ELL+L GSVV L LAGEPL+I +NG L+A+GE VV+ +K+G+R+TD Sbjct: 158 SAELGRAKMLINELLQLGTGSVVELTKLAGEPLEIYVNGKLVARGEAVVINEKFGIRLTD 217 Query: 125 IITPSERMRRLS 136 II+P ER++ L+ Sbjct: 218 IISPIERVKHLA 229 >UniRef50_C1TKI4 Flagellar motor switch protein FliN n=1 Tax=Dethiosulfovibrio peptidovorans DSM 11002 RepID=C1TKI4_9BACT Length = 384 Score = 134 bits (337), Expect = 1e-30, Method: Composition-based stats. Identities = 51/136 (37%), Positives = 77/136 (56%), Gaps = 4/136 (2%) Query: 5 NNPADDNNGAMDDLWAEALSEQKSTSSKSAAETVFQQFG----GGDVSGTLQDIDLIMDI 60 PA +S+ S + + QF S +I LI DI Sbjct: 248 QRPAQQQAPRPSGGGGAGMSQPPSGEASPPVDVRPAQFSPLQPAAVDSSLPSNIGLIADI 307 Query: 61 PVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQGEVVVVADKYGV 120 PV++TVELGRTR ++ E+L GSV+ LD +AGEP+D+L+NG LIA+GEVVV+ + +GV Sbjct: 308 PVRVTVELGRTRKSVGEVLSFAPGSVIELDKMAGEPVDVLVNGKLIAKGEVVVIDENFGV 367 Query: 121 RITDIITPSERMRRLS 136 R+T+I+ E+++ + Sbjct: 368 RVTEILNVGEKIQSIG 383 >UniRef50_A3DCN7 CheC, inhibitor of MCP methylation n=2 Tax=Clostridium thermocellum RepID=A3DCN7_CLOTH Length = 406 Score = 133 bits (336), Expect = 1e-30, Method: Composition-based stats. Identities = 51/105 (48%), Positives = 74/105 (70%), Gaps = 1/105 (0%) Query: 29 TSSKSAAETVFQQFGGG-DVSGTLQDIDLIMDIPVKLTVELGRTRMTIKELLRLTQGSVV 87 + + F+ F G +S ++I LIMD+P+++TVELGRT IK++L GS++ Sbjct: 302 RNPINVQPAQFEAFDDGSKISIDKKNIGLIMDVPLQVTVELGRTNKLIKDILEFGPGSII 361 Query: 88 ALDGLAGEPLDILINGYLIAQGEVVVVADKYGVRITDIITPSERM 132 LD LAGEP+DIL+NG +IA GEVVV+ + +GVRITDI+ PS+R+ Sbjct: 362 ELDKLAGEPVDILVNGKVIAIGEVVVIDESFGVRITDILHPSKRL 406 >UniRef50_Q2NX05 Flagellar motor switch protein FliN n=5 Tax=Enterobacteriaceae RepID=Q2NX05_SODGM Length = 134 Score = 132 bits (333), Expect = 3e-30, Method: Composition-based stats. Identities = 70/131 (53%), Positives = 88/131 (67%), Gaps = 1/131 (0%) Query: 8 ADDNNGAMDDLWAEALSEQKSTSSKSAAETVFQQFGGGDV-SGTLQDIDLIMDIPVKLTV 66 G L T+ + + F + S +D+ LI+DIPVK+TV Sbjct: 4 TPHTPGDEAPLHETDGQSLGDTACPAPSRPEFPPASTTEGGSPLTEDLSLILDIPVKMTV 63 Query: 67 ELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQGEVVVVADKYGVRITDII 126 ELGRTRMTI+ELL L+Q +VV L+G AGEPLDILINGYLIA+GEVVV+ ++YGVRI DI+ Sbjct: 64 ELGRTRMTIRELLHLSQDAVVPLEGQAGEPLDILINGYLIARGEVVVMGEQYGVRIADIV 123 Query: 127 TPSERMRRLSR 137 TP+ERMRRLSR Sbjct: 124 TPAERMRRLSR 134 >UniRef50_B8CYQ5 CheC, inhibitor of MCP methylation n=1 Tax=Halothermothrix orenii H 168 RepID=B8CYQ5_HALOH Length = 375 Score = 132 bits (333), Expect = 3e-30, Method: Composition-based stats. Identities = 49/109 (44%), Positives = 76/109 (69%) Query: 27 KSTSSKSAAETVFQQFGGGDVSGTLQDIDLIMDIPVKLTVELGRTRMTIKELLRLTQGSV 86 + F F G+ + Q+++LI D+P+++TV LG+TRMTIK++L L +GS+ Sbjct: 267 AGEENVDVKRAQFPSFDNGNTAPLPQNMELIQDVPLEVTVRLGKTRMTIKQILDLGEGSI 326 Query: 87 VALDGLAGEPLDILINGYLIAQGEVVVVADKYGVRITDIITPSERMRRL 135 V L+ LAGEP+D+L+NG LIA+GEVVV+ + +G R+ DII+P ER+ + Sbjct: 327 VELEKLAGEPVDLLVNGKLIAKGEVVVIDENFGFRVKDIISPMERLNNI 375 >UniRef50_A8F896 Flagellar motor switch protein FliN n=3 Tax=Thermotoga RepID=A8F896_THELT Length = 343 Score = 132 bits (332), Expect = 4e-30, Method: Composition-based stats. Identities = 48/110 (43%), Positives = 73/110 (66%), Gaps = 6/110 (5%) Query: 34 AAETVFQQFGGGD------VSGTLQDIDLIMDIPVKLTVELGRTRMTIKELLRLTQGSVV 87 FQ+F S ++L++D+P+K+ VELGR +MT+K++L + GS++ Sbjct: 230 VQPVQFQEFDQSQRAAVSTPSEFSDKLELLLDVPLKVVVELGRAKMTLKQVLEMNIGSLI 289 Query: 88 ALDGLAGEPLDILINGYLIAQGEVVVVADKYGVRITDIITPSERMRRLSR 137 LD L GEP+DIL+NG LIA+GEVVVV + +GVRIT+I+TP +R+ + Sbjct: 290 ELDKLTGEPVDILVNGRLIAKGEVVVVDENFGVRITEIVTPKQRIYSIRE 339 >UniRef50_C8WWF9 CheC, inhibitor of MCP methylation / FliN fusion protein n=2 Tax=Alicyclobacillus acidocaldarius RepID=C8WWF9_ALIAD Length = 381 Score = 132 bits (332), Expect = 4e-30, Method: Composition-based stats. Identities = 48/131 (36%), Positives = 72/131 (54%), Gaps = 3/131 (2%) Query: 8 ADDNNGAMDDLWAEALSEQKSTSSKSAAETVFQQFGGGDVSGTLQ---DIDLIMDIPVKL 64 A+ DD A + S + F F G + ++ L+ D+P+ + Sbjct: 250 AEARGKNRDDAQAANRGREDEGPSVAVRRPAFPDFDEGVTPRDARPVANLSLLYDVPLNV 309 Query: 65 TVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQGEVVVVADKYGVRITD 124 TVELGR + I+E+L L GS++ LD LAGEP+DI +N IA GEVVV+ + +GVR+TD Sbjct: 310 TVELGRAKKLIREILELAPGSILELDKLAGEPVDIYVNQKKIAIGEVVVIDENFGVRVTD 369 Query: 125 IITPSERMRRL 135 I+ +R+ L Sbjct: 370 IVQADKRIDPL 380 >UniRef50_C9R9W6 CheC, inhibitor of MCP methylation / FliN fusion protein n=1 Tax=Ammonifex degensii KC4 RepID=C9R9W6_AMMDK Length = 360 Score = 131 bits (331), Expect = 5e-30, Method: Composition-based stats. Identities = 53/127 (41%), Positives = 80/127 (62%) Query: 11 NNGAMDDLWAEALSEQKSTSSKSAAETVFQQFGGGDVSGTLQDIDLIMDIPVKLTVELGR 70 + ++E S + ++ +A + ++LI+DIP+K++V LGR Sbjct: 230 EEEKREKPYSEKPSPAEEAAATAAPAVTPSSPAPPPLDVDRSRLELILDIPLKVSVVLGR 289 Query: 71 TRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQGEVVVVADKYGVRITDIITPSE 130 TR IKE+L L GS++ LD LA EP++IL+NG L+A+GEVVVV + +GVRIT I+TP E Sbjct: 290 TRRPIKEILGLGPGSILELDALADEPVEILVNGVLVARGEVVVVEENFGVRITSIVTPQE 349 Query: 131 RMRRLSR 137 R+R L+R Sbjct: 350 RLRYLAR 356 >UniRef50_D1C1A4 Flagellar motor switch protein FliN n=1 Tax=Sphaerobacter thermophilus DSM 20745 RepID=D1C1A4_SPHTD Length = 144 Score = 131 bits (329), Expect = 9e-30, Method: Composition-based stats. Identities = 50/112 (44%), Positives = 67/112 (59%) Query: 21 EALSEQKSTSSKSAAETVFQQFGGGDVSGTLQDIDLIMDIPVKLTVELGRTRMTIKELLR 80 A EQ + S F SG Q I+ + D+ V+LT ELG RM IK +L Sbjct: 30 AAPGEQAGGEAASVHPAAFMALSQETQSGGPQSIEFLRDVEVELTAELGTARMQIKHILG 89 Query: 81 LTQGSVVALDGLAGEPLDILINGYLIAQGEVVVVADKYGVRITDIITPSERM 132 L GSVV L+ LAGEP+DI++N LIA+GEVVVV +K+ VR+ +I+ P R+ Sbjct: 90 LRPGSVVELNRLAGEPVDIMVNKTLIARGEVVVVDEKFAVRVVEIVPPERRL 141 >UniRef50_C5VT98 Flagellar motor switch phosphatase FliY n=1 Tax=Clostridium botulinum D str. 1873 RepID=C5VT98_CLOBO Length = 394 Score = 131 bits (329), Expect = 9e-30, Method: Composition-based stats. Identities = 50/135 (37%), Positives = 85/135 (62%), Gaps = 2/135 (1%) Query: 1 MSDMNNPADDNNGAMDDLWAEALSEQKSTSSKSAAETVFQQFGGGDVSGTLQDIDLIMDI 60 ++ M N +N ++ E + KS + + F +++G Q+IDLI+D+ Sbjct: 260 INKMQNQETSSNSQVEPKPVETYT--KSQPQVNIQKASFAPLQESNINGAPQNIDLILDV 317 Query: 61 PVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQGEVVVVADKYGV 120 P++++V LG+T+ +IK++L L GS++ LD LA EP++I +NG IA GEVVVV + +GV Sbjct: 318 PLEISVVLGKTKKSIKDILALGTGSLIELDKLAEEPVEIYVNGKKIAYGEVVVVDENFGV 377 Query: 121 RITDIITPSERMRRL 135 RI +I++ ER++ L Sbjct: 378 RIVNIVSGEERVKSL 392 >UniRef50_B5Y7F0 Flagellar motor switch phosphatase FliY (CheY-Pphosphatase fliY) (Flagellar motor switch protein fliY) n=1 Tax=Coprothermobacter proteolyticus DSM 5265 RepID=B5Y7F0_COPPD Length = 287 Score = 131 bits (329), Expect = 9e-30, Method: Composition-based stats. Identities = 55/132 (41%), Positives = 85/132 (64%), Gaps = 5/132 (3%) Query: 2 SDMNNPADDNNGAMDDLWAEALSEQKSTSSKSAAETVFQQFGGGDVSGTLQDIDLIMDIP 61 SD++ AD + ++ A + E T Q GD+ ++++L++D+ Sbjct: 158 SDVSERADAVSSEVEKTSASVMQENDVEDV-----TFPQLRPEGDIQPLPRNLELLLDVK 212 Query: 62 VKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQGEVVVVADKYGVR 121 V ++VELGR+R++IK+LL L GS++ LD LAGEP+DIL+NG IA+GEVVV+ + +GVR Sbjct: 213 VNVSVELGRSRVSIKDLLSLGSGSIITLDKLAGEPVDILVNGKPIAKGEVVVIDESFGVR 272 Query: 122 ITDIITPSERMR 133 I DII P ER++ Sbjct: 273 ILDIIAPKERLK 284 >UniRef50_A4J737 CheC, inhibitor of MCP methylation n=1 Tax=Desulfotomaculum reducens MI-1 RepID=A4J737_DESRM Length = 411 Score = 131 bits (329), Expect = 1e-29, Method: Composition-based stats. Identities = 54/127 (42%), Positives = 83/127 (65%) Query: 11 NNGAMDDLWAEALSEQKSTSSKSAAETVFQQFGGGDVSGTLQDIDLIMDIPVKLTVELGR 70 ++ D+L + E + + S +++DLI+DIP+K++V LGR Sbjct: 283 DDRESDELAGIMMQETAPPPTPAMPPQAAPIKQTSLASLEQRNLDLILDIPLKVSVILGR 342 Query: 71 TRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQGEVVVVADKYGVRITDIITPSE 130 T+ IK++L++ GSVV LD LA EP+DIL+NG L+A GEVVVV + +G+RIT+II+P E Sbjct: 343 TKRPIKDVLKIAPGSVVELDSLADEPVDILVNGTLVATGEVVVVNENFGIRITNIISPME 402 Query: 131 RMRRLSR 137 R++RLS+ Sbjct: 403 RVKRLSK 409 >UniRef50_C0R179 Flagellar motor switch protein n=2 Tax=Brachyspira RepID=C0R179_BRAHW Length = 360 Score = 130 bits (328), Expect = 1e-29, Method: Composition-based stats. Identities = 46/104 (44%), Positives = 67/104 (64%) Query: 34 AAETVFQQFGGGDVSGTLQDIDLIMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLA 93 F +I L+MD+ + +TVELGR MTI+++L L +GS++ L LA Sbjct: 257 VQHAEFNSLMPASDVQGTGNIGLLMDVTMNMTVELGRATMTIRDILGLGEGSIIELQKLA 316 Query: 94 GEPLDILINGYLIAQGEVVVVADKYGVRITDIITPSERMRRLSR 137 GEP+D+L+NG LIA+GEVVV+ + +GVR+TDII P +R+ R Sbjct: 317 GEPVDLLVNGKLIAKGEVVVIDENFGVRVTDIINPMDRLTNKPR 360 >UniRef50_A5D0K1 Flagellum motor switch protein n=4 Tax=Bacteria RepID=A5D0K1_PELTS Length = 422 Score = 130 bits (328), Expect = 1e-29, Method: Composition-based stats. Identities = 55/129 (42%), Positives = 76/129 (58%) Query: 9 DDNNGAMDDLWAEALSEQKSTSSKSAAETVFQQFGGGDVSGTLQDIDLIMDIPVKLTVEL 68 + + L EQ+ AA + + + +DLI+DIP+K+TV L Sbjct: 294 PEPGKEAERLQGPPAWEQEIRPPAGAAARPGTEPLTAPAAIDQRRLDLILDIPLKVTVIL 353 Query: 69 GRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQGEVVVVADKYGVRITDIITP 128 GRTR IK++L LT GSVV L L EP+++L+NG L+A GEVVVV + +GVRIT II P Sbjct: 354 GRTRWPIKDILGLTPGSVVELQNLVDEPVEVLVNGVLVAFGEVVVVNENFGVRITSIIGP 413 Query: 129 SERMRRLSR 137 ER++ L R Sbjct: 414 EERLQNLRR 422 >UniRef50_A8U602 Flagellar motor switch protein n=5 Tax=Lactobacillales RepID=A8U602_9LACT Length = 360 Score = 129 bits (326), Expect = 2e-29, Method: Composition-based stats. Identities = 45/128 (35%), Positives = 76/128 (59%) Query: 9 DDNNGAMDDLWAEALSEQKSTSSKSAAETVFQQFGGGDVSGTLQDIDLIMDIPVKLTVEL 68 A Q++ + FQ+ T +++DLIMD+P++ +V L Sbjct: 233 QAEEMTAPIAPAANQPTQETAGKIGIQKPEFQELTHAGSLKTPRNLDLIMDVPLQFSVML 292 Query: 69 GRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQGEVVVVADKYGVRITDIITP 128 G ++ TIK++L L GSVV L+ + EPL+I +NG LIA+GEVVV+ + +G+RIT+I++ Sbjct: 293 GESKKTIKDILSLGTGSVVELNKMTDEPLEIYVNGKLIAEGEVVVINESFGIRITNILSK 352 Query: 129 SERMRRLS 136 +R++ L+ Sbjct: 353 EQRIKHLN 360 >UniRef50_P24073 Flagellar motor switch phosphatase fliY n=8 Tax=Bacteria RepID=FLIY_BACSU Length = 378 Score = 129 bits (326), Expect = 2e-29, Method: Composition-based stats. Identities = 48/131 (36%), Positives = 80/131 (61%), Gaps = 1/131 (0%) Query: 7 PADDNNGAMDDLWAEALSEQKSTSSKSAAETVFQQFGGGD-VSGTLQDIDLIMDIPVKLT 65 P + K + + F F + V + ++D+++DIP+ +T Sbjct: 248 PEPRIEPKQQQQPPKRQGTAKKAAPVQVSPVEFSAFDPNEAVQAPIHNLDMLLDIPLSIT 307 Query: 66 VELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQGEVVVVADKYGVRITDI 125 VELGRT+ ++KE+L L+ GS++ LD LAGEP+DIL+N ++A+GEVVV+ + +GVR+TDI Sbjct: 308 VELGRTKRSVKEILELSAGSIIELDKLAGEPVDILVNQRIVAKGEVVVIEENFGVRVTDI 367 Query: 126 ITPSERMRRLS 136 ++ +ER+ L Sbjct: 368 LSQAERINNLK 378 >UniRef50_A5IJA7 CheC, inhibitor of MCP methylation n=5 Tax=Thermotogaceae RepID=A5IJA7_THEP1 Length = 346 Score = 129 bits (326), Expect = 2e-29, Method: Composition-based stats. Identities = 47/86 (54%), Positives = 70/86 (81%) Query: 52 QDIDLIMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQGEV 111 ++L++DIP+++TVELGRTRMT+K +L + GS++ LD L GEP+DIL+NG LIA+GEV Sbjct: 261 DKLELLLDIPLRVTVELGRTRMTLKRVLEMIPGSIIELDKLTGEPVDILVNGKLIARGEV 320 Query: 112 VVVADKYGVRITDIITPSERMRRLSR 137 VV+ + +GVRIT+I++P ER+ L+ Sbjct: 321 VVIDENFGVRITEIVSPKERLELLNE 346 >UniRef50_Q6MI47 Flagellar motor switch protein FliN n=2 Tax=Deltaproteobacteria RepID=Q6MI47_BDEBA Length = 122 Score = 129 bits (326), Expect = 2e-29, Method: Composition-based stats. Identities = 55/122 (45%), Positives = 85/122 (69%) Query: 15 MDDLWAEALSEQKSTSSKSAAETVFQQFGGGDVSGTLQDIDLIMDIPVKLTVELGRTRMT 74 M D + L++Q + AE+ ++ + +++ LI+DIP+K++VELGRT+M Sbjct: 1 MSDDTLDNLADQLVAEAAGMAESSGRKASSEMPTHKDRNLSLILDIPLKVSVELGRTKMP 60 Query: 75 IKELLRLTQGSVVALDGLAGEPLDILINGYLIAQGEVVVVADKYGVRITDIITPSERMRR 134 + ELL LTQGSV+ L LAGEP+++ +N LIA+GE VVV +K+GVR+TDII+P+ER+ + Sbjct: 61 VSELLNLTQGSVIELSKLAGEPMEVYVNDKLIARGEAVVVNEKFGVRLTDIISPAERVEQ 120 Query: 135 LS 136 L Sbjct: 121 LR 122 >UniRef50_Q51466 Flagellar motor switch protein fliN n=23 Tax=Proteobacteria RepID=FLIN_PSEAE Length = 157 Score = 129 bits (326), Expect = 2e-29, Method: Composition-based stats. Identities = 54/120 (45%), Positives = 83/120 (69%), Gaps = 5/120 (4%) Query: 22 ALSEQKSTSSKSAAETVFQQFGGGDVSGTL-----QDIDLIMDIPVKLTVELGRTRMTIK 76 A + S ++FG + T+ ++D+I+DIPV +++E+G T ++I+ Sbjct: 38 AQGGATPVAEPSTPRAPMEEFGASPKAPTISGLEGPNLDVILDIPVTISMEVGHTDISIR 97 Query: 77 ELLRLTQGSVVALDGLAGEPLDILINGYLIAQGEVVVVADKYGVRITDIITPSERMRRLS 136 LL+L QGSV+ LD LAGEPLD+L+NG LIA GEVVVV +K+G+R+TD+I+PSER+++L Sbjct: 98 NLLQLNQGSVIELDRLAGEPLDVLVNGTLIAHGEVVVVNEKFGIRLTDVISPSERIKKLR 157 >UniRef50_B9PA59 Predicted protein n=2 Tax=cellular organisms RepID=B9PA59_POPTR Length = 284 Score = 129 bits (324), Expect = 3e-29, Method: Composition-based stats. Identities = 50/88 (56%), Positives = 70/88 (79%) Query: 48 SGTLQDIDLIMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIA 107 S + ID ++D+P+ ++V +G RM IK+LL+L QGSVV LD LAGEP++ILIN L+A Sbjct: 197 SEPPESIDFLLDVPLTVSVRVGTARMLIKDLLQLGQGSVVELDKLAGEPMEILINDKLVA 256 Query: 108 QGEVVVVADKYGVRITDIITPSERMRRL 135 +GEVV+V DKYGVR+TDI++P ER++ L Sbjct: 257 RGEVVMVNDKYGVRLTDIVSPIERIKSL 284 >UniRef50_B5YIZ3 Flagellar motor switch protein FliN n=1 Tax=Thermodesulfovibrio yellowstonii DSM 11347 RepID=B5YIZ3_THEYD Length = 139 Score = 128 bits (323), Expect = 4e-29, Method: Composition-based stats. Identities = 55/120 (45%), Positives = 83/120 (69%) Query: 17 DLWAEALSEQKSTSSKSAAETVFQQFGGGDVSGTLQDIDLIMDIPVKLTVELGRTRMTIK 76 D+ E+ + + +F + +DID I+DIP++L V +GRTR+ ++ Sbjct: 20 DMAKALEMEKAMKAKEEVQSPHIDEFTVTEEKPKTRDIDFILDIPLELVVVIGRTRILVQ 79 Query: 77 ELLRLTQGSVVALDGLAGEPLDILINGYLIAQGEVVVVADKYGVRITDIITPSERMRRLS 136 ELL+LTQGSVVALD LAGEP+++ +NG L+ +GEVVVV +K+G+RITDII+P ER+++L Sbjct: 80 ELLQLTQGSVVALDKLAGEPMEVYVNGKLVGRGEVVVVNEKFGIRITDIISPQERVKQLG 139 >UniRef50_A6TRP4 CheC, inhibitor of MCP methylation n=11 Tax=Clostridia RepID=A6TRP4_ALKMQ Length = 393 Score = 128 bits (321), Expect = 7e-29, Method: Composition-based stats. Identities = 47/120 (39%), Positives = 72/120 (60%) Query: 16 DDLWAEALSEQKSTSSKSAAETVFQQFGGGDVSGTLQDIDLIMDIPVKLTVELGRTRMTI 75 D + S + FQ F G ++I LI D+P+ +TVELGRT I Sbjct: 274 DAPVQQRQQPSLENSKINVQPVQFQSFDQQSNRGLPENIALIQDVPLSVTVELGRTVKKI 333 Query: 76 KELLRLTQGSVVALDGLAGEPLDILINGYLIAQGEVVVVADKYGVRITDIITPSERMRRL 135 E+L G+++ L+ + GEPLDIL+NG +A+GEVVV+ + YG+RITDI+ P++R+ ++ Sbjct: 334 SEVLEFGPGTIIELEKVVGEPLDILVNGQYVAKGEVVVIDENYGIRITDIVAPAKRLSKI 393 >UniRef50_B0K9T5 CheC, inhibitor of MCP methylation / FliN fusion protein n=5 Tax=Thermoanaerobacterales RepID=B0K9T5_THEP3 Length = 375 Score = 128 bits (321), Expect = 7e-29, Method: Composition-based stats. Identities = 45/112 (40%), Positives = 74/112 (66%) Query: 25 EQKSTSSKSAAETVFQQFGGGDVSGTLQDIDLIMDIPVKLTVELGRTRMTIKELLRLTQG 84 +++ + F + +++DLI+D+P+ +TVELG+T+ IK++L L++G Sbjct: 264 KEQKVNVSPVVFQSFDEDSSSKGKKDKENLDLILDVPLTITVELGKTKKLIKDILELSEG 323 Query: 85 SVVALDGLAGEPLDILINGYLIAQGEVVVVADKYGVRITDIITPSERMRRLS 136 S++ LD LAGEP+DIL NG IA+GEVVV+ + +GVRI DI+ S+R+ + Sbjct: 324 SIIELDKLAGEPVDILANGKYIAKGEVVVIDENFGVRIIDIVHQSKRISNIE 375 >UniRef50_C1I888 Flagellar switch protein FliY n=1 Tax=Clostridium sp. 7_2_43FAA RepID=C1I888_9CLOT Length = 370 Score = 127 bits (320), Expect = 8e-29, Method: Composition-based stats. Identities = 47/106 (44%), Positives = 74/106 (69%) Query: 31 SKSAAETVFQQFGGGDVSGTLQDIDLIMDIPVKLTVELGRTRMTIKELLRLTQGSVVALD 90 F+ G V + ++IDLI+D+P++++V LGRT+ +IK++L L+ GS++ LD Sbjct: 265 PVEVHGATFEPLSQGVVGESHRNIDLILDVPLEVSVVLGRTKKSIKDILDLSTGSLIELD 324 Query: 91 GLAGEPLDILINGYLIAQGEVVVVADKYGVRITDIITPSERMRRLS 136 LA EP+++LING IA GEVVVV + +GVRIT I++ ++R+R L Sbjct: 325 KLAEEPVEVLINGKKIAYGEVVVVDENFGVRITSIVSGADRIRTLK 370 >UniRef50_B0MPD4 Putative uncharacterized protein n=1 Tax=Eubacterium siraeum DSM 15702 RepID=B0MPD4_9FIRM Length = 419 Score = 127 bits (320), Expect = 9e-29, Method: Composition-based stats. Identities = 41/115 (35%), Positives = 77/115 (66%), Gaps = 1/115 (0%) Query: 23 LSEQKSTSSKSAAETVFQQFGGGDVSGTLQDIDLIMDIPVKLTVELGRTRMTIKELLRLT 82 + Q + + ++A F+ F S +++ L+MD+P++++VE+G T+ IK++L + Sbjct: 304 MQPQPAVNYRNAQLAQFENFEAPLGSEQKENLQLLMDVPLQISVEIGSTKKKIKDILEFS 363 Query: 83 QGSVVALDGLAGEPLDILINGYLIAQGEVVVVADKYGVRITDIITPSERMRRLSR 137 QG+++ L+ AG P+D+++NG LIA+G+VVV+ D + VRIT+I+ S+ M L + Sbjct: 364 QGTIIELERQAGAPVDVMVNGNLIARGDVVVIDDNFAVRITEIV-KSKFMDSLGK 417 >UniRef50_C7R0I7 Flagellar motor switch protein FliN n=1 Tax=Jonesia denitrificans DSM 20603 RepID=C7R0I7_JONDD Length = 259 Score = 127 bits (320), Expect = 9e-29, Method: Composition-based stats. Identities = 46/120 (38%), Positives = 73/120 (60%), Gaps = 2/120 (1%) Query: 16 DDLWAEALSEQKSTSSKSAAETVFQQFGGGDVSGTLQD--IDLIMDIPVKLTVELGRTRM 73 A A + Q S+ S E + F + D + L+ D+ + LTVE+GR ++ Sbjct: 140 PSPAASARTAQAEPSAPSPTEPEIRPFTPPMMGSGTGDDKLRLLYDVEMTLTVEIGRAKL 199 Query: 74 TIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQGEVVVVADKYGVRITDIITPSERMR 133 ++++L LT GS+V LD +AG P D+L+NG+L+A+GEVVVV + YG+R+T+II +E Sbjct: 200 PVRQVLDLTPGSIVELDRVAGAPADLLVNGHLVARGEVVVVDEDYGLRVTEIIDTTEVFS 259 >UniRef50_A6W8L1 Flagellar motor switch protein FliN n=1 Tax=Kineococcus radiotolerans SRS30216 RepID=A6W8L1_KINRD Length = 249 Score = 127 bits (320), Expect = 9e-29, Method: Composition-based stats. Identities = 49/103 (47%), Positives = 67/103 (65%) Query: 27 KSTSSKSAAETVFQQFGGGDVSGTLQDIDLIMDIPVKLTVELGRTRMTIKELLRLTQGSV 86 + A F G +G + +DL+ D+ + +TVELGRT MT+++LL LT GSV Sbjct: 144 AQPDTTPAPMPSFAPAGTPAPAGPRRTMDLLRDVQMDVTVELGRTSMTVQDLLALTPGSV 203 Query: 87 VALDGLAGEPLDILINGYLIAQGEVVVVADKYGVRITDIITPS 129 V LD AG P D+L+NG LIA+GEVVVV + Y +RIT+I+TP Sbjct: 204 VELDRAAGSPADVLVNGQLIARGEVVVVDEDYAIRITEIVTPE 246 >UniRef50_Q3BU42 Flagellar motor switch/type III secretory pathway protein FliN n=9 Tax=Xanthomonas RepID=Q3BU42_XANC5 Length = 112 Score = 126 bits (318), Expect = 2e-28, Method: Composition-based stats. Identities = 51/104 (49%), Positives = 76/104 (73%), Gaps = 1/104 (0%) Query: 34 AAETVFQQFGGG-DVSGTLQDIDLIMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDGL 92 A+ F D + ++D+I+D+PV L++E+GR R+ I+ LL+L QGSVV L+ Sbjct: 9 ASPATFDSLQAEQDQNAADLNLDVILDVPVTLSLEVGRARIPIRNLLQLNQGSVVELERG 68 Query: 93 AGEPLDILINGYLIAQGEVVVVADKYGVRITDIITPSERMRRLS 136 AGEPLD+ +NG LIA GEVVV+ D++G+R+TD+++PSER+RRL Sbjct: 69 AGEPLDVYVNGTLIAHGEVVVINDRFGIRLTDVVSPSERIRRLR 112 >UniRef50_B8FK37 Flagellar motor switch protein FliN n=3 Tax=Bacteria RepID=B8FK37_DESAA Length = 119 Score = 126 bits (317), Expect = 2e-28, Method: Composition-based stats. Identities = 56/119 (47%), Positives = 81/119 (68%) Query: 18 LWAEALSEQKSTSSKSAAETVFQQFGGGDVSGTLQDIDLIMDIPVKLTVELGRTRMTIKE 77 + EAL ++ + + + T G + D+D I+DIP+ +TVELGRT M IK+ Sbjct: 1 MEEEALQQEMNENLPAENMTDGLPAAGDADADGDGDLDFILDIPLDITVELGRTSMRIKD 60 Query: 78 LLRLTQGSVVALDGLAGEPLDILINGYLIAQGEVVVVADKYGVRITDIITPSERMRRLS 136 LL+L QG+VV L LAGEP++I +NG L A+GEVVVV +K+GVR+TDI++P ER++ L Sbjct: 61 LLQLGQGAVVELTKLAGEPMEIFVNGKLFARGEVVVVNEKFGVRLTDIVSPQERIKSLR 119 >UniRef50_A6M1D2 CheC, inhibitor of MCP methylation n=24 Tax=Clostridium RepID=A6M1D2_CLOB8 Length = 398 Score = 126 bits (317), Expect = 2e-28, Method: Composition-based stats. Identities = 44/106 (41%), Positives = 72/106 (67%) Query: 31 SKSAAETVFQQFGGGDVSGTLQDIDLIMDIPVKLTVELGRTRMTIKELLRLTQGSVVALD 90 F+ + +++IDLI+D+P+ ++V LGRT+ +I+++L L GS++ LD Sbjct: 293 PVEVHAATFEPLMPQNSVPPIKNIDLILDVPLDISVVLGRTKKSIQDILNLGTGSLIELD 352 Query: 91 GLAGEPLDILINGYLIAQGEVVVVADKYGVRITDIITPSERMRRLS 136 LA EP++IL+NG IA GEVVVV + +G+RIT+I++ ER++RL Sbjct: 353 KLAEEPVEILVNGKQIALGEVVVVDENFGIRITNIVSSVERIKRLK 398 >UniRef50_A9BEY5 CheC, inhibitor of MCP methylation / FliN fusion protein n=1 Tax=Petrotoga mobilis SJ95 RepID=A9BEY5_PETMO Length = 372 Score = 126 bits (316), Expect = 3e-28, Method: Composition-based stats. Identities = 45/132 (34%), Positives = 78/132 (59%), Gaps = 1/132 (0%) Query: 6 NPADDNNGAMDDLWAEALSEQKSTSSKSAAETVFQQFGGGDVSG-TLQDIDLIMDIPVKL 64 + N + ++K + F++ L ++L++D+P++L Sbjct: 241 DEESSKNSNTQKRSNSNVIKEKKVKVQPVEFGEFEKKEEPISPNIDLSKLELLLDVPLEL 300 Query: 65 TVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQGEVVVVADKYGVRITD 124 VELG T++ ++E+L L +GS++ L+ LAGEPLDI NG LIA+GEVVV+ + +G+R+T+ Sbjct: 301 KVELGSTKLNLREILELHEGSMIQLNKLAGEPLDIYANGRLIARGEVVVIDENFGIRVTE 360 Query: 125 IITPSERMRRLS 136 I++ ERM+ L Sbjct: 361 IVSLRERMKTLK 372 >UniRef50_C4ZAN3 Flagellar motor switch protein n=2 Tax=Clostridiales RepID=C4ZAN3_EUBR3 Length = 404 Score = 125 bits (314), Expect = 5e-28, Method: Composition-based stats. Identities = 45/115 (39%), Positives = 71/115 (61%), Gaps = 2/115 (1%) Query: 17 DLWAEALSEQKS-TSSKSAAETVFQQFGGGDVS-GTLQDIDLIMDIPVKLTVELGRTRMT 74 + + + Q + + F FG ++IDLIMD+P+++TVELGRT+ + Sbjct: 283 GMMNQNMGAQNMIGNQVNVQNAQFTPFGAMPNQVYQPENIDLIMDVPLEVTVELGRTKKS 342 Query: 75 IKELLRLTQGSVVALDGLAGEPLDILINGYLIAQGEVVVVADKYGVRITDIITPS 129 I E+L G ++ L+ LAGEP+DIL+NG +A+GEVVV+ + +GVRIT+I+ Sbjct: 343 ISEILDFGPGKIIELNKLAGEPIDILVNGKYVAKGEVVVIEESFGVRITEIVNSK 397 >UniRef50_Q30VB8 Surface presentation of antigens (SPOA) protein n=4 Tax=Deltaproteobacteria RepID=Q30VB8_DESDG Length = 175 Score = 124 bits (312), Expect = 9e-28, Method: Composition-based stats. Identities = 49/97 (50%), Positives = 73/97 (75%) Query: 40 QQFGGGDVSGTLQDIDLIMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDI 99 ++ +++D I+DIP+ ++ ELGRTR+ I ELL+L QGSVV L+ LAGEPL+I Sbjct: 79 EEAKSPRPDSGKRELDFILDIPLDVSAELGRTRLLINELLQLGQGSVVELNKLAGEPLEI 138 Query: 100 LINGYLIAQGEVVVVADKYGVRITDIITPSERMRRLS 136 +NG L+A+GE VV+ +K+GVR+TDII+P ER+++L Sbjct: 139 YVNGKLVARGEAVVINEKFGVRLTDIISPIERVKQLG 175 >UniRef50_C8W1I6 CheC, inhibitor of MCP methylation / FliN fusion protein n=1 Tax=Desulfotomaculum acetoxidans DSM 771 RepID=C8W1I6_DESAS Length = 572 Score = 124 bits (312), Expect = 9e-28, Method: Composition-based stats. Identities = 52/127 (40%), Positives = 78/127 (61%), Gaps = 3/127 (2%) Query: 9 DDNNGAMDDLWAEALSEQKSTSSKSAAETVFQQFGGGDVSGTLQDIDLIMDIPVKLTVEL 68 N ++L A Q T +S E ++ I+LI+D+P+ +TV L Sbjct: 446 PVTNKPPENLSPMAAGGQNQTGYQSVPE---ERVSQTPADVNWDKINLILDVPLNVTVVL 502 Query: 69 GRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQGEVVVVADKYGVRITDIITP 128 G+T+ IK++L LT GSVV L L EP+++L+NG L+A+GEVVVV + +GVRIT++ITP Sbjct: 503 GKTKKPIKDVLGLTPGSVVELGALVEEPVEVLVNGTLVARGEVVVVNENFGVRITNVITP 562 Query: 129 SERMRRL 135 ER++ L Sbjct: 563 QERIQYL 569 >UniRef50_C4Z5H2 Flagellar motor switch protein FliN/FliY n=3 Tax=Bacteria RepID=C4Z5H2_EUBE2 Length = 437 Score = 123 bits (310), Expect = 1e-27, Method: Composition-based stats. Identities = 44/118 (37%), Positives = 71/118 (60%), Gaps = 3/118 (2%) Query: 12 NGAMDDLWAEALSEQ--KSTSSKSAAETVFQQFGGGDVS-GTLQDIDLIMDIPVKLTVEL 68 M + + + Q + A FQ F ++I+LI D+P+++TVEL Sbjct: 319 GMPMQGMMGQPMPMQGYAQPQDVNVAPAAFQPFATDVNPISQKENIELIKDVPLEVTVEL 378 Query: 69 GRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQGEVVVVADKYGVRITDII 126 GRT +IK++L G++V L+ +AGE +D+L+NG +A+GEVVV+ + +GVRIT+II Sbjct: 379 GRTTKSIKDILEFAPGTIVELNKIAGESVDVLVNGKYVAKGEVVVIEESFGVRITEII 436 >UniRef50_Q0AA08 Flagellar motor switch protein FliN n=49 Tax=cellular organisms RepID=Q0AA08_ALHEH Length = 226 Score = 123 bits (309), Expect = 2e-27, Method: Composition-based stats. Identities = 55/132 (41%), Positives = 89/132 (67%), Gaps = 2/132 (1%) Query: 7 PADDNNGAMDDLWAEALSEQKSTSSKSAAETVFQQFGGG--DVSGTLQDIDLIMDIPVKL 64 P + + G A Q++ ++ A + G ++ ++D+IMDIPV L Sbjct: 95 PEEPSAGQRAATEARETQRQENWQAERAELDELEPDAGAGRNLGDEEANLDVIMDIPVTL 154 Query: 65 TVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQGEVVVVADKYGVRITD 124 ++E+GRT+++I+ LL+L QGSVV LD LAGEPLD+++NG LIA GEVVVV +++G+R+TD Sbjct: 155 SMEIGRTQISIRHLLQLNQGSVVELDRLAGEPLDVMVNGTLIAHGEVVVVNERFGIRLTD 214 Query: 125 IITPSERMRRLS 136 +I+ +ER+++L Sbjct: 215 VISAAERVKKLR 226 >UniRef50_C4G689 Putative uncharacterized protein n=1 Tax=Abiotrophia defectiva ATCC 49176 RepID=C4G689_ABIDE Length = 370 Score = 123 bits (308), Expect = 2e-27, Method: Composition-based stats. Identities = 44/106 (41%), Positives = 69/106 (65%), Gaps = 1/106 (0%) Query: 22 ALSEQKSTSSKSAAETVFQQFGGGDVSG-TLQDIDLIMDIPVKLTVELGRTRMTIKELLR 80 + + + A FQ F ++I LIMD+P+++TVELGRT TIKE+L Sbjct: 264 MPTPAMPSQPVNVAPAQFQAFDTNINPLMQQENIGLIMDVPLEVTVELGRTNKTIKEILD 323 Query: 81 LTQGSVVALDGLAGEPLDILINGYLIAQGEVVVVADKYGVRITDII 126 + G+++ L+ LAGE +D+L+NG +A+GEVVV+ D +G+RIT+I+ Sbjct: 324 FSPGTIIELNKLAGEAIDLLVNGKYVAKGEVVVIEDNFGIRITEIV 369 >UniRef50_B0P9X9 Putative uncharacterized protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0P9X9_9FIRM Length = 446 Score = 122 bits (306), Expect = 4e-27, Method: Composition-based stats. Identities = 40/121 (33%), Positives = 72/121 (59%), Gaps = 1/121 (0%) Query: 17 DLWAEALSEQKSTSSKSAAETVFQQFGGGDVSGTLQDIDLIMDIPVKLTVELGRTRMTIK 76 + + QK + ++ F D + ++DL+M + + ++VE+G+T+ IK Sbjct: 324 GMQEPQPATQKPINVQNTQFPQF-TVQQTDSPTSNANMDLLMGVSLDVSVEIGQTKRKIK 382 Query: 77 ELLRLTQGSVVALDGLAGEPLDILINGYLIAQGEVVVVADKYGVRITDIITPSERMRRLS 136 +++ QG+V+ L+ AG P+DI++NG L+A+G+VVV+ D +GVRIT+I+ E M L Sbjct: 383 DIIDFGQGTVIELNKQAGAPVDIVVNGRLLARGDVVVIDDNFGVRITEIVGTKELMESLK 442 Query: 137 R 137 Sbjct: 443 E 443 >UniRef50_A9KNE6 CheC, inhibitor of MCP methylation / FliN fusion protein n=2 Tax=Bacteria RepID=A9KNE6_CLOPH Length = 401 Score = 121 bits (303), Expect = 8e-27, Method: Composition-based stats. Identities = 44/103 (42%), Positives = 70/103 (67%), Gaps = 1/103 (0%) Query: 25 EQKSTSSKSAAETVFQQFGGGDVSG-TLQDIDLIMDIPVKLTVELGRTRMTIKELLRLTQ 83 Q + + A FQ F ++IDL++D+P+++TVELGRT +I+E+L Sbjct: 298 PQGMVQNVNIAPAQFQPFVNTGSPLLQTENIDLLLDVPLEVTVELGRTSKSIREILDFAP 357 Query: 84 GSVVALDGLAGEPLDILINGYLIAQGEVVVVADKYGVRITDII 126 G++V L+ LAGEP+D+L+NG +A+GEVVV+ + +G+R+TDII Sbjct: 358 GTIVELNRLAGEPIDVLVNGKYVAKGEVVVIEEAFGIRVTDII 400 >UniRef50_Q6AJS8 Probable flagellar motor switch protein (FliN) n=1 Tax=Desulfotalea psychrophila RepID=Q6AJS8_DESPS Length = 123 Score = 120 bits (302), Expect = 1e-26, Method: Composition-based stats. Identities = 37/98 (37%), Positives = 72/98 (73%) Query: 40 QQFGGGDVSGTLQDIDLIMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDI 99 +Q + + +D + D+P++++VE+GR+++ IK+LL + +G V+ L+ +AG+PLD+ Sbjct: 26 EQEHTTLENNEARSLDFLYDVPLEVSVEVGRSKILIKDLLNMGEGYVIELNKVAGDPLDL 85 Query: 100 LINGYLIAQGEVVVVADKYGVRITDIITPSERMRRLSR 137 +N LIA+GE V++ DK+G+R+TD+++ S+R+ RL + Sbjct: 86 YVNSRLIARGEAVMIGDKFGIRLTDVVSASDRLERLGK 123 >UniRef50_Q2RKB6 CheC, inhibitor of MCP methylation n=1 Tax=Moorella thermoacetica ATCC 39073 RepID=Q2RKB6_MOOTA Length = 395 Score = 120 bits (302), Expect = 1e-26, Method: Composition-based stats. Identities = 48/120 (40%), Positives = 71/120 (59%), Gaps = 1/120 (0%) Query: 19 WAEALSEQKSTSSKSAAETVFQQFGGGDVSG-TLQDIDLIMDIPVKLTVELGRTRMTIKE 77 A A S + T + + Q G V G + ++IDLI+D+P+ + V LG I++ Sbjct: 276 QASAPSSRAQTPGGAGSPGGGQTQRQGQVYGASSRNIDLILDVPLDIEVILGTAMKRIQD 335 Query: 78 LLRLTQGSVVALDGLAGEPLDILINGYLIAQGEVVVVADKYGVRITDIITPSERMRRLSR 137 +L L G++V LD L EP+ I +NG IAQGEVV+V + +GVRIT I+ P ER+ L + Sbjct: 336 ILSLAPGAIVELDRLVEEPVQITVNGTPIAQGEVVIVNENFGVRITHILEPYERINHLRQ 395 >UniRef50_Q67K24 Flagellar motor switch protein n=1 Tax=Symbiobacterium thermophilum RepID=Q67K24_SYMTH Length = 126 Score = 120 bits (301), Expect = 1e-26, Method: Composition-based stats. Identities = 43/110 (39%), Positives = 67/110 (60%), Gaps = 1/110 (0%) Query: 21 EALSEQKSTSSKSAAETVFQQFG-GGDVSGTLQDIDLIMDIPVKLTVELGRTRMTIKELL 79 AL Q + F G G + L+ D+ ++LTVELG++R +++E+L Sbjct: 12 AALFAQARQGEQKPEAAAFPDLNPEGSAQGDPSPLGLLADVELELTVELGQSRRSLREIL 71 Query: 80 RLTQGSVVALDGLAGEPLDILINGYLIAQGEVVVVADKYGVRITDIITPS 129 + GSV+ LD AGE +D+L+NG L+A+GEVVV+ + YG+RIT++I P Sbjct: 72 AMGPGSVLELDKHAGEAVDLLVNGQLVARGEVVVIGENYGIRITELINPE 121 >UniRef50_Q1NP93 Surface presentation of antigens (SPOA) protein n=2 Tax=Deltaproteobacteria RepID=Q1NP93_9DELT Length = 136 Score = 119 bits (299), Expect = 3e-26, Method: Composition-based stats. Identities = 52/138 (37%), Positives = 86/138 (62%), Gaps = 4/138 (2%) Query: 1 MSDMNNPADDNNGAMDDLWAEALSEQKSTSS--KSAAETVFQQFGGGDVSGTLQDIDLIM 58 M+D D W+ AL++Q S + + GG S + Q++D ++ Sbjct: 1 MADEEKNQATEEAGDD--WSAALADQGKDSPAFEELEASGAAGGGGAAPSASTQNLDFLL 58 Query: 59 DIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQGEVVVVADKY 118 D+P+++TVELGRT M I +LL+LTQGSVV LD AG ++I +N L+ +GEVVVV +++ Sbjct: 59 DVPLEVTVELGRTSMIINKLLQLTQGSVVELDKAAGASVEIYVNRKLMGKGEVVVVNERF 118 Query: 119 GVRITDIITPSERMRRLS 136 G+R+T+II+ ++R++ + Sbjct: 119 GIRVTEIISQADRIKSIG 136 >UniRef50_B9L5A1 Flagellar motor switch phosphatase FliY (CheY-Pphosphatase fliY) (Flagellar motor switch protein fliY) n=1 Tax=Thermomicrobium roseum DSM 5159 RepID=B9L5A1_THERP Length = 128 Score = 119 bits (298), Expect = 3e-26, Method: Composition-based stats. Identities = 52/117 (44%), Positives = 72/117 (61%), Gaps = 5/117 (4%) Query: 21 EALSEQKSTSSKSAAETVFQQ-----FGGGDVSGTLQDIDLIMDIPVKLTVELGRTRMTI 75 + L+ + SS ET Q+ + Q ID + D+ V+LT ELG RM I Sbjct: 6 DTLNRGQEPSSVRPPETPIQEARFVDLRDQPIGNGRQGIDFLRDVEVELTAELGSARMRI 65 Query: 76 KELLRLTQGSVVALDGLAGEPLDILINGYLIAQGEVVVVADKYGVRITDIITPSERM 132 K +L L GSVV LD LAGEP+++ IN LIA+GEVVVV +K+ VRIT+I++P +R+ Sbjct: 66 KHILGLRPGSVVELDRLAGEPVELTINKTLIARGEVVVVDEKFAVRITEIVSPEKRL 122 >UniRef50_Q8D3E9 FliN protein n=3 Tax=Enterobacteriaceae RepID=Q8D3E9_WIGBR Length = 135 Score = 118 bits (296), Expect = 6e-26, Method: Composition-based stats. Identities = 65/138 (47%), Positives = 97/138 (70%), Gaps = 4/138 (2%) Query: 1 MSDMNN-PADDNNGAMDDLWAEALSEQKSTSSKSAAETVFQQFGGGDVSGTLQDIDLIMD 59 M+D+ P N +++DL + ++ +S+ E + +S +DI+LI+D Sbjct: 1 MNDIKKEPEKIKNDSVEDLNNDDEIKELKANSEEIKEIDSSKIKNKKLS---EDINLILD 57 Query: 60 IPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQGEVVVVADKYG 119 IP+K+T+ELGRT+MTI++LL L + S+V LDG GEPLDILIN YL+A+GEVVV+ ++YG Sbjct: 58 IPIKMTIELGRTKMTIRDLLLLKRDSIVTLDGEIGEPLDILINDYLVARGEVVVMKERYG 117 Query: 120 VRITDIITPSERMRRLSR 137 ++I DIITP ER+RRL+R Sbjct: 118 IKILDIITPEERIRRLNR 135 >UniRef50_C2ED81 Flagellar motor switch protein FliY n=1 Tax=Lactobacillus ruminis ATCC 25644 RepID=C2ED81_9LACO Length = 409 Score = 118 bits (296), Expect = 6e-26, Method: Composition-based stats. Identities = 46/103 (44%), Positives = 70/103 (67%), Gaps = 1/103 (0%) Query: 34 AAETVFQQFGGGDVSGTLQDIDLIMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLA 93 ++ FQ G ++DL+MDIP+ L+V LG ++ +++E+L GSV+ L+ L Sbjct: 308 VSQPSFQTLDGHAQVEG-DNLDLLMDIPLNLSVVLGTSKKSVREILSFNTGSVIELEKLT 366 Query: 94 GEPLDILINGYLIAQGEVVVVADKYGVRITDIITPSERMRRLS 136 EPLDIL+NG LIAQGEVVV+ D +GVRIT+I++ S+R+ + Sbjct: 367 DEPLDILLNGKLIAQGEVVVINDNFGVRITNILSQSQRINNMR 409 >UniRef50_Q3ADB7 Flagellar motor switch protein n=1 Tax=Carboxydothermus hydrogenoformans Z-2901 RepID=Q3ADB7_CARHZ Length = 347 Score = 117 bits (294), Expect = 1e-25, Method: Composition-based stats. Identities = 46/125 (36%), Positives = 77/125 (61%), Gaps = 4/125 (3%) Query: 11 NNGAMDDLWAEALSEQKSTSSKSAAETVFQQFGGGDVSGTLQDIDLIMDIPVKLTVELGR 70 + E L K+T+ + E +QF V T + ++LI+DIP+K+ V LGR Sbjct: 227 PETEPAVMAHEMLEGAKATNIEKKVEKAEEQF----VLPTDEKLELILDIPLKVEVVLGR 282 Query: 71 TRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQGEVVVVADKYGVRITDIITPSE 130 TR IKE+L G+++ LD L E +++L+NG L+A+GE+VVV + +G++I I++P E Sbjct: 283 TRRPIKEILSFGPGAIIDLDQLVDEDVEVLVNGTLVAKGEIVVVGENFGIKINQILSPKE 342 Query: 131 RMRRL 135 R+ ++ Sbjct: 343 RLSKI 347 >UniRef50_B2V6S4 Flagellar motor switch protein FliN n=3 Tax=Sulfurihydrogenibium RepID=B2V6S4_SULSY Length = 194 Score = 116 bits (291), Expect = 2e-25, Method: Composition-based stats. Identities = 51/146 (34%), Positives = 87/146 (59%), Gaps = 11/146 (7%) Query: 2 SDMNNPADDNNGAMDDL---WAEALSEQKSTSSKS-------AAETVFQQFGGGDVSGTL 51 S+M N + G+ +DL W+E L E+KS S + + F + S + Sbjct: 44 SEMLNESGKKEGSQEDLAAQWSEMLHEEKSESVDANTHQTPLKESEKKESFTKEEFSPEI 103 Query: 52 QD-IDLIMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQGE 110 + +D+++DIP+ +TVE+G M+I+E+L+L SV+ LD EP+D+ +NG L+A+GE Sbjct: 104 LNKLDILLDIPITITVEVGSKSMSIEEILKLAPSSVIDLDKYLNEPIDLKVNGVLVAKGE 163 Query: 111 VVVVADKYGVRITDIITPSERMRRLS 136 + V D + ++IT+I+T ER+R +S Sbjct: 164 LYQVDDNFAIKITEILTKEERVRLVS 189 >UniRef50_A1SEN5 Flagellar motor switch protein FliN n=1 Tax=Nocardioides sp. JS614 RepID=A1SEN5_NOCSJ Length = 246 Score = 116 bits (291), Expect = 2e-25, Method: Composition-based stats. Identities = 42/111 (37%), Positives = 69/111 (62%) Query: 17 DLWAEALSEQKSTSSKSAAETVFQQFGGGDVSGTLQDIDLIMDIPVKLTVELGRTRMTIK 76 D+ A L + + + +G + I+++ + +++TVE+GR RMT++ Sbjct: 131 DVVAALLVPEALLAHPADDTPALPTTSAAAPTGDRRGIEMLHGVDMEVTVEIGRARMTVR 190 Query: 77 ELLRLTQGSVVALDGLAGEPLDILINGYLIAQGEVVVVADKYGVRITDIIT 127 ELL L G+V+ LD AG P D+L+NG LIA+GEVVV+ + +G+RIT+I+T Sbjct: 191 ELLDLAPGAVLELDRAAGSPADLLVNGRLIARGEVVVIDEDFGLRITEIVT 241 >UniRef50_B4U6V5 Flagellar motor switch protein FliN n=1 Tax=Hydrogenobaculum sp. Y04AAS1 RepID=B4U6V5_HYDS0 Length = 149 Score = 116 bits (290), Expect = 3e-25, Method: Composition-based stats. Identities = 53/131 (40%), Positives = 77/131 (58%), Gaps = 5/131 (3%) Query: 6 NPADDNNGAMDDLWAEALSEQKSTSSKSAAETVFQQFGGGDVSGTLQDIDLIMDIPVKLT 65 P N+ + LW EA+ Q T S+AE Q D+S +D+ I+DIP+ +T Sbjct: 22 EPTPQNDEDLMKLWEEAIQAQAQTE--SSAENQQAQATTQDIS---KDLQRILDIPLSIT 76 Query: 66 VELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQGEVVVVADKYGVRITDI 125 V +G T +TIKELL L GSV+ALD + + NG LIA+ E+VVV + +G+RI +I Sbjct: 77 VVIGTTVITIKELLNLRPGSVMALDESINSFVSVYANGKLIAKAELVVVGENFGIRIAEI 136 Query: 126 ITPSERMRRLS 136 I ER++ L+ Sbjct: 137 IEKEERVKSLA 147 >UniRef50_C1SNF8 Flagellar motor switch protein FliN n=1 Tax=Denitrovibrio acetiphilus DSM 12809 RepID=C1SNF8_9BACT Length = 299 Score = 115 bits (288), Expect = 5e-25, Method: Composition-based stats. Identities = 39/106 (36%), Positives = 72/106 (67%) Query: 31 SKSAAETVFQQFGGGDVSGTLQDIDLIMDIPVKLTVELGRTRMTIKELLRLTQGSVVALD 90 + E FGGG G+ ++DL++DI V ++V++G T+M +K++L + G+++ LD Sbjct: 193 PEDDDEPATGGFGGGYGGGSPSNLDLLLDIDVPVSVKMGSTKMFLKDILTMGSGNIIELD 252 Query: 91 GLAGEPLDILINGYLIAQGEVVVVADKYGVRITDIITPSERMRRLS 136 A EP++++IN +IA+GEVV+V +G RI +I++ +ER+++L Sbjct: 253 ESADEPVELVINNKVIARGEVVIVDGYFGFRIKEIVSRAERIKKLK 298 >UniRef50_D2R538 Flagellar motor switch protein FliN n=2 Tax=Planctomycetaceae RepID=D2R538_9PLAN Length = 212 Score = 114 bits (286), Expect = 9e-25, Method: Composition-based stats. Identities = 39/110 (35%), Positives = 69/110 (62%) Query: 21 EALSEQKSTSSKSAAETVFQQFGGGDVSGTLQDIDLIMDIPVKLTVELGRTRMTIKELLR 80 ++ + + A F+ SG ++L+ D+ + L +ELGRT M ++++L+ Sbjct: 101 ASVDQPVDPAIAGIAPFAFRDLAAAPPSGEKATLELLRDVDLDLRIELGRTEMFLEDVLK 160 Query: 81 LTQGSVVALDGLAGEPLDILINGYLIAQGEVVVVADKYGVRITDIITPSE 130 L +GSVV LD LAG+P+DI +NG LIA+GEV+V+ D + VR+ ++++ + Sbjct: 161 LRRGSVVTLDKLAGDPVDIYVNGRLIARGEVLVLNDNFCVRVAELLSGDD 210 >UniRef50_D0YPX2 Flagellar motor switch protein FliN n=2 Tax=Mobiluncus mulieris RepID=D0YPX2_9ACTO Length = 254 Score = 113 bits (284), Expect = 1e-24, Method: Composition-based stats. Identities = 38/107 (35%), Positives = 64/107 (59%) Query: 28 STSSKSAAETVFQQFGGGDVSGTLQDIDLIMDIPVKLTVELGRTRMTIKELLRLTQGSVV 87 +A T + + L+ D+ + LT E+GRT++ + ++L L+ GSV+ Sbjct: 147 PKKEGESATTPPASQATATAEQRAESMKLLYDVEMTLTAEIGRTKLAVHDVLDLSPGSVI 206 Query: 88 ALDGLAGEPLDILINGYLIAQGEVVVVADKYGVRITDIITPSERMRR 134 LD AG D+++NG LIA GE+VVV ++YG+RIT+I++ +E+ R Sbjct: 207 ELDRSAGSAADVMVNGRLIAHGEIVVVDEEYGIRITEIVSLAEQQNR 253 >UniRef50_A8RWA3 Putative uncharacterized protein n=3 Tax=Clostridiales RepID=A8RWA3_9CLOT Length = 320 Score = 113 bits (284), Expect = 1e-24, Method: Composition-based stats. Identities = 38/134 (28%), Positives = 71/134 (52%), Gaps = 6/134 (4%) Query: 1 MSDMNNPADDNNGAMDDLWAEALSEQKSTSSKSAAETVFQQFGGGDVSGTLQDI----DL 56 M+DM P + G + A + + + + E F +F + + I Sbjct: 189 MADM--PCQETGGQTPGMPAAGMQTAEHKEAIAVQEVSFPEFKYTPIVYAKEQIGEEKKK 246 Query: 57 IMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQGEVVVVAD 116 ++DI + ++V LG T ++K++L L +G ++ LD AG P D+++NG LI +G+V+V D Sbjct: 247 LLDITLDVSVRLGSTVCSVKDILSLKEGQLLVLDKQAGSPADVVVNGELIGRGDVLVTGD 306 Query: 117 KYGVRITDIITPSE 130 ++G RI +++ E Sbjct: 307 RFGARIIEVVGKRE 320 >UniRef50_C1ZEF0 Flagellar motor switch protein FliN n=1 Tax=Planctomyces limnophilus DSM 3776 RepID=C1ZEF0_PLALI Length = 193 Score = 113 bits (283), Expect = 2e-24, Method: Composition-based stats. Identities = 50/143 (34%), Positives = 80/143 (55%), Gaps = 16/143 (11%) Query: 3 DMNNPADDNNGAMDDL------WAEALSEQKST-------SSKSAAETVFQQFGG---GD 46 + PA N A L A ALSE+ ++ A F++FG Sbjct: 50 QAHQPASRNTSAEQSLRQAEQQLAAALSEELPPRNMRGLPPGEAPARFEFEEFGTPFPTR 109 Query: 47 VSGTLQDIDLIMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLI 106 + + +D + D+ + + +ELGRT + I E+++L +G+VV LD LAG+P+DIL+NG L+ Sbjct: 110 AAAPVFPLDALQDVELDIRIELGRTELLIDEVMQLREGAVVPLDKLAGDPVDILVNGKLL 169 Query: 107 AQGEVVVVADKYGVRITDIITPS 129 A+GEV+V+ D + VRI +I+T Sbjct: 170 ARGEVLVLNDNFCVRIAEILTQD 192 >UniRef50_A8RWD0 Putative uncharacterized protein n=3 Tax=Clostridiales RepID=A8RWD0_9CLOT Length = 368 Score = 113 bits (283), Expect = 2e-24, Method: Composition-based stats. Identities = 36/80 (45%), Positives = 60/80 (75%) Query: 53 DIDLIMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQGEVV 112 ++ LIMD+P+ ++VE+G+TR +K++L + G+VV LD + P+DI++NG LIA+GEVV Sbjct: 285 NLSLIMDVPLNVSVEIGKTRRRLKDVLNFSNGTVVELDKQSDAPVDIIVNGQLIARGEVV 344 Query: 113 VVADKYGVRITDIITPSERM 132 V+ D +GVRI++I+ + Sbjct: 345 VIDDNFGVRISEIVNTRSII 364 >UniRef50_A6Q2L3 Flagellar motor switch protein FliN n=1 Tax=Nitratiruptor sp. SB155-2 RepID=A6Q2L3_NITSB Length = 133 Score = 113 bits (282), Expect = 3e-24, Method: Composition-based stats. Identities = 40/136 (29%), Positives = 78/136 (57%), Gaps = 4/136 (2%) Query: 1 MSDMNNPADDNNGAMDDLWAEALSEQKSTSSKSAAETVFQQFGGGDVSGTLQDIDLIMDI 60 MS+ NP+ + + + LS + + + A E+ + + +++D+ Sbjct: 1 MSEETNPSPEEQNSEEQP---ELSPDELMAQQFAQES-YGSETEEEDRIEKSKFSILLDV 56 Query: 61 PVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQGEVVVVADKYGV 120 P+ + VE+G T+M ++E+L+L SVV L+ EP+D+ +NG +IA+GE+ V + +G+ Sbjct: 57 PLDVIVEIGSTQMPLEEVLKLNPNSVVELNRFIHEPVDLKVNGKVIAKGELYTVKNNFGL 116 Query: 121 RITDIITPSERMRRLS 136 +IT ++TP ER++ L Sbjct: 117 KITHVVTPEERLKILE 132 >UniRef50_D1BCL8 Flagellar motor switch protein FliN n=1 Tax=Sanguibacter keddieii DSM 10542 RepID=D1BCL8_SANKS Length = 247 Score = 113 bits (282), Expect = 3e-24, Method: Composition-based stats. Identities = 34/97 (35%), Positives = 61/97 (62%) Query: 34 AAETVFQQFGGGDVSGTLQDIDLIMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLA 93 G + ++ L+ D+ + L+ E+GR ++ ++++L L G+V+ LD +A Sbjct: 148 VPAAQAGAAGTSKGASVGDNLRLLYDVEMTLSAEIGRAKLPVRQVLELVPGAVIELDRVA 207 Query: 94 GEPLDILINGYLIAQGEVVVVADKYGVRITDIITPSE 130 G P D+++NG LIA+GEVVV+ + YG+RIT+I+ +E Sbjct: 208 GSPADLMVNGRLIARGEVVVIDEDYGLRITEIVDLAE 244 >UniRef50_A0LT68 Flagellar motor switch protein FliN n=1 Tax=Acidothermus cellulolyticus 11B RepID=A0LT68_ACIC1 Length = 123 Score = 113 bits (282), Expect = 3e-24, Method: Composition-based stats. Identities = 46/110 (41%), Positives = 69/110 (62%), Gaps = 1/110 (0%) Query: 23 LSEQKSTSSKSAAETVFQQFGGGDVSGTLQDIDLIMDIPVKLTVELGRTRMTIKELLRLT 82 LS SS+ A + ++L+ ++ + +T ELGRTRMT++ELL L Sbjct: 11 LSALVGDSSEPAESVSPVNSAASAQTVRASRLELLQNVEMGVTAELGRTRMTVRELLSLA 70 Query: 83 QGSVVALDGLAGEPLDILINGYLIAQGEVVVVADKYGVRITDIITP-SER 131 G VV L+ AG P+D+ +NG LIA+GEVVV+ +++GVRI++I+ P SER Sbjct: 71 PGMVVELNRAAGSPIDLYVNGTLIARGEVVVIDEEFGVRISEIVGPDSER 120 >UniRef50_C0GJF1 Flagellar motor switch protein FliN n=1 Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GJF1_9FIRM Length = 141 Score = 112 bits (281), Expect = 3e-24, Method: Composition-based stats. Identities = 43/128 (33%), Positives = 69/128 (53%), Gaps = 3/128 (2%) Query: 8 ADDNNGAMDDLWAEALSEQKSTSSKSAAETVFQQFGGGDVSGTLQDIDLIMDIPVKLTVE 67 + + E LS Q + G +++ I+DIP++++V Sbjct: 16 TQVPSETEETPVVEDLSFQAKEMPQPKKNKPRAANAGMQSHP---NLERILDIPLRVSVS 72 Query: 68 LGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQGEVVVVADKYGVRITDIIT 127 LG+T I +++ L G++V D GEP+DI +NG LIA+GEVVVV + +GVRI+ IIT Sbjct: 73 LGKTEKPILDVVSLAPGAIVDFDRNVGEPVDITLNGKLIARGEVVVVGEHFGVRISQIIT 132 Query: 128 PSERMRRL 135 P +R+ + Sbjct: 133 PQQRIENM 140 >UniRef50_Q01PP4 Flagellar motor switch protein FliN n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q01PP4_SOLUE Length = 282 Score = 112 bits (281), Expect = 3e-24, Method: Composition-based stats. Identities = 35/112 (31%), Positives = 66/112 (58%) Query: 25 EQKSTSSKSAAETVFQQFGGGDVSGTLQDIDLIMDIPVKLTVELGRTRMTIKELLRLTQG 84 + ++A E + + ++L++D+ + +++ G+T + +K++L+LT G Sbjct: 171 SPAAGQPEAAPEDAGGEPHTVKRNDMPPTMELLLDVELPVSISFGKTEILMKDVLKLTTG 230 Query: 85 SVVALDGLAGEPLDILINGYLIAQGEVVVVADKYGVRITDIITPSERMRRLS 136 S+V L+ EP+++L+N LIA+GEVVVV YGVRI I+ +R+R + Sbjct: 231 SIVELNRGVNEPVEVLVNHCLIARGEVVVVEGNYGVRIQQIVNRQDRLRSIR 282 >UniRef50_Q1Q6T3 Strong similar to flagellar motor switch protein FliN n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1Q6T3_9BACT Length = 120 Score = 112 bits (280), Expect = 5e-24, Method: Composition-based stats. Identities = 43/111 (38%), Positives = 75/111 (67%) Query: 26 QKSTSSKSAAETVFQQFGGGDVSGTLQDIDLIMDIPVKLTVELGRTRMTIKELLRLTQGS 85 Q + S ++ + ++ + ++DLI+D+ V ++VELGR M IK++L L+QGS Sbjct: 10 QPTIESVEFSQLIPEEMDSQKGGEGMPNLDLILDVTVPVSVELGRANMLIKDILALSQGS 69 Query: 86 VVALDGLAGEPLDILINGYLIAQGEVVVVADKYGVRITDIITPSERMRRLS 136 +V L+ +AG P+++L+ G L+A+GEVVVV +++G++IT I P +R+R L Sbjct: 70 IVELEKVAGTPVELLVRGKLLARGEVVVVEERFGLKITAICGPQDRVRNLG 120 >UniRef50_D0MGA9 Flagellar motor switch protein FliN n=1 Tax=Rhodothermus marinus DSM 4252 RepID=D0MGA9_RHOM4 Length = 293 Score = 111 bits (278), Expect = 7e-24, Method: Composition-based stats. Identities = 40/103 (38%), Positives = 67/103 (65%), Gaps = 2/103 (1%) Query: 34 AAETVFQQFGGGDVS--GTLQDIDLIMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDG 91 F + G + G +++L+ D+ +++ VELGR R+ + ++LRLT GS++ L+ Sbjct: 188 VRPASFGELGPERIGDGGVKGNLELLADVELEIVVELGRRRLPLADVLRLTTGSIIELEK 247 Query: 92 LAGEPLDILINGYLIAQGEVVVVADKYGVRITDIITPSERMRR 134 L GEPL+I NG LIA+GE VV+ +++GVRIT ++T S + + Sbjct: 248 LVGEPLEIYANGRLIAEGEAVVIDEQFGVRITSLVTGSRQREK 290 >UniRef50_A7GZX6 Iron chelatin ABC transporter, substrate binding protein n=20 Tax=Campylobacter RepID=A7GZX6_CAMC5 Length = 286 Score = 111 bits (278), Expect = 7e-24, Method: Composition-based stats. Identities = 41/129 (31%), Positives = 70/129 (54%), Gaps = 4/129 (3%) Query: 8 ADDNNGAMDDLWAEALSEQKSTSSKSAAETVFQQFGGGDVSGTLQDIDLIMDIPVKLTVE 67 D + SE +S A +F +++I+LIMD+ + + V Sbjct: 162 CDHTLMKFFEPTKVGESESQSGDQAKATHGSRSEFSA----EEMRNINLIMDVRLPIRVR 217 Query: 68 LGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQGEVVVVADKYGVRITDIIT 127 +G RM +K++L + GSV+ L+ LA +PL+ILI +IA GEVV++ +G++IT I + Sbjct: 218 IGSKRMLLKDVLSMDIGSVIELNQLANDPLEILIGDKVIALGEVVIIDGNFGIQITQIGS 277 Query: 128 PSERMRRLS 136 ER+++L Sbjct: 278 KRERLQQLK 286 >UniRef50_Q7ULU7 Flagellar motor switch protein fliN n=1 Tax=Rhodopirellula baltica RepID=Q7ULU7_RHOBA Length = 141 Score = 111 bits (278), Expect = 8e-24, Method: Composition-based stats. Identities = 45/110 (40%), Positives = 70/110 (63%) Query: 20 AEALSEQKSTSSKSAAETVFQQFGGGDVSGTLQDIDLIMDIPVKLTVELGRTRMTIKELL 79 A A +++ST + D+DL+ ++ + L +ELGRT+M ++E+L Sbjct: 31 AAATGDKESTERDVPRPFALGDLSPNSLGEAAHDVDLLGEVEMDLRIELGRTQMRLEEVL 90 Query: 80 RLTQGSVVALDGLAGEPLDILINGYLIAQGEVVVVADKYGVRITDIITPS 129 RL GSVVALD LAG+P+DI +NG LIA+GEV+V+ D + VR+T+++ S Sbjct: 91 RLRAGSVVALDKLAGDPVDIYVNGRLIARGEVLVMNDNFCVRVTELVGAS 140 >UniRef50_B8HEJ4 Flagellar motor switch protein FliN n=1 Tax=Arthrobacter chlorophenolicus A6 RepID=B8HEJ4_ARTCA Length = 238 Score = 111 bits (277), Expect = 9e-24, Method: Composition-based stats. Identities = 42/91 (46%), Positives = 59/91 (64%) Query: 43 GGGDVSGTLQDIDLIMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILIN 102 G + + + LI ++ + LTVE+GRTRM++++ L L G V+ LD AG P D+L+N Sbjct: 148 GAHNDASVPARLSLISNVEMSLTVEIGRTRMSVRDALALEPGKVIELDRSAGAPADVLLN 207 Query: 103 GYLIAQGEVVVVADKYGVRITDIITPSERMR 133 G LIA GEVVVV Y VRIT I+ +E +R Sbjct: 208 GRLIAHGEVVVVDQDYAVRITRILDTAEGLR 238 >UniRef50_C2BUL2 Flagellar motor switch protein FliN n=1 Tax=Mobiluncus curtisii ATCC 43063 RepID=C2BUL2_9ACTO Length = 250 Score = 111 bits (277), Expect = 1e-23, Method: Composition-based stats. Identities = 34/92 (36%), Positives = 62/92 (67%) Query: 43 GGGDVSGTLQDIDLIMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILIN 102 + + L+ D+ + LT E+GRT++ + ++L L+ GSV+ LD AG D+++N Sbjct: 156 STATPEQRAESMKLLYDVEMTLTAEIGRTKLAVHDVLDLSPGSVIELDRSAGSAADVMVN 215 Query: 103 GYLIAQGEVVVVADKYGVRITDIITPSERMRR 134 G LIA+GE+VVV ++YG+RIT+I++ +++ + Sbjct: 216 GRLIARGEIVVVDEEYGIRITEIVSLADQQNQ 247 >UniRef50_A9HHD1 Flagellar motor switch protein FliN n=2 Tax=Rhodospirillales RepID=A9HHD1_GLUDA Length = 125 Score = 111 bits (277), Expect = 1e-23, Method: Composition-based stats. Identities = 47/123 (38%), Positives = 69/123 (56%), Gaps = 5/123 (4%) Query: 8 ADDNNGAMDDLWAEALSEQKSTSSKSAAETVFQQFGGGDVSGTLQDIDLIMDIPVKLTVE 67 +D ++D + A S + SA +Q GD SG ++ + DIPVK+T Sbjct: 3 TNDPGIGLEDFSSAAPSPAGAEPDGSATAAGRKQ-KNGDGSGQ---MEAVYDIPVKITAV 58 Query: 68 LGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQGEVVVVAD-KYGVRITDII 126 +G M + +LL+L +G+VV LD GE +DI N LIA+GEVVVV D GV +T+II Sbjct: 59 IGSATMPVSQLLKLGRGAVVELDRKLGEAVDIYANNRLIARGEVVVVDDNHIGVTMTEII 118 Query: 127 TPS 129 + + Sbjct: 119 SSA 121 >UniRef50_A4A5Y8 Flagellar motor switch protein fliN n=3 Tax=unclassified Gammaproteobacteria RepID=A4A5Y8_9GAMM Length = 117 Score = 111 bits (277), Expect = 1e-23, Method: Composition-based stats. Identities = 47/116 (40%), Positives = 76/116 (65%) Query: 21 EALSEQKSTSSKSAAETVFQQFGGGDVSGTLQDIDLIMDIPVKLTVELGRTRMTIKELLR 80 + +++ E +G D+DL+MD+ V L+VE+GRT++ IK+LL Sbjct: 2 SDEQATDAVAAEPPEELQSTAPPAAASAGGKIDLDLLMDVQVTLSVEIGRTKLPIKDLLA 61 Query: 81 LTQGSVVALDGLAGEPLDILINGYLIAQGEVVVVADKYGVRITDIITPSERMRRLS 136 L QGS+V+LD EPLD+++NG LIA+GEVV A ++G+R+ D+++PSER+++L Sbjct: 62 LNQGSIVSLDRGVKEPLDLMVNGTLIARGEVVESAGQFGLRLIDVVSPSERLKKLK 117 >UniRef50_Q2RZE3 Possible flagellar motor switch FliN n=1 Tax=Salinibacter ruber DSM 13855 RepID=Q2RZE3_SALRD Length = 250 Score = 111 bits (277), Expect = 1e-23, Method: Composition-based stats. Identities = 45/131 (34%), Positives = 73/131 (55%), Gaps = 3/131 (2%) Query: 8 ADDNNGAMDDLWAEALSEQKSTSS-KSAAETVFQQFGGGDVSGTLQD--IDLIMDIPVKL 64 AD ++GA A S S + F + G ++SG L+ D+ +++ Sbjct: 119 ADQSSGASQPAGGGAPSSSADESDGVEVSPAAFSELGDEEISGDGDSGTFKLLADVDLEV 178 Query: 65 TVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQGEVVVVADKYGVRITD 124 VELGR + + ++L+LT GSVV L+ + GEPL + NG LIA+GE VV+ +++GVRIT+ Sbjct: 179 RVELGRRELPLADVLKLTTGSVVELEKMVGEPLSVYANGRLIAEGEAVVIDEQFGVRITN 238 Query: 125 IITPSERMRRL 135 + + R + Sbjct: 239 LASEGHREKAF 249 >UniRef50_B6BN04 Flagellar motor switch FliN n=1 Tax=Campylobacterales bacterium GD 1 RepID=B6BN04_9PROT Length = 288 Score = 111 bits (277), Expect = 1e-23, Method: Composition-based stats. Identities = 37/88 (42%), Positives = 62/88 (70%) Query: 49 GTLQDIDLIMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQ 108 + +I LIMD+ + + V +G+ +M +K++L + GSV+ L+ LA +PLDIL++ ++IAQ Sbjct: 200 EEMNNISLIMDVKLPVRVRIGKKKMLLKDVLNMDIGSVIELNQLANDPLDILVDNHVIAQ 259 Query: 109 GEVVVVADKYGVRITDIITPSERMRRLS 136 GEVV+V +GV+IT I + ER+ +L Sbjct: 260 GEVVIVDGNFGVQITSIGSKRERLTQLK 287 >UniRef50_Q4JMS2 Predicted flagellar motor switch protein n=3 Tax=Bacteria RepID=Q4JMS2_9BACT Length = 110 Score = 109 bits (274), Expect = 2e-23, Method: Composition-based stats. Identities = 47/113 (41%), Positives = 78/113 (69%), Gaps = 3/113 (2%) Query: 23 LSEQKSTSSKSAAETVFQQFGGGDVSGTLQDIDLIMDIPVKLTVELGRTRMTIKELLRLT 82 +SE+ + +A ET+ + + +++ L+ +I V LTVE+G+ + I++LLRL Sbjct: 1 MSEETELAEDAATETMDAE---TAARVSAENMRLLENIDVALTVEVGKAEIKIRDLLRLN 57 Query: 83 QGSVVALDGLAGEPLDILINGYLIAQGEVVVVADKYGVRITDIITPSERMRRL 135 +GSV+ LD LAG+PLDIL NG +IA+GEVV+V +++G+R T+I+ P+ RM + Sbjct: 58 EGSVIELDRLAGDPLDILANGTMIAKGEVVMVGERFGIRFTEIVDPAARMESV 110 >UniRef50_C3XES1 Flagellar motor switch protein FliY n=1 Tax=Helicobacter bilis ATCC 43879 RepID=C3XES1_9HELI Length = 283 Score = 109 bits (274), Expect = 2e-23, Method: Composition-based stats. Identities = 37/105 (35%), Positives = 64/105 (60%) Query: 32 KSAAETVFQQFGGGDVSGTLQDIDLIMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDG 91 K+ A T +++I +++DI + + V +G+ RM +K+++ + GSVV L+ Sbjct: 178 KAPASTASGNKDVSLSDKEMRNIGMLLDIGLSVKVRIGQKRMLLKDVISMDIGSVVELNQ 237 Query: 92 LAGEPLDILINGYLIAQGEVVVVADKYGVRITDIITPSERMRRLS 136 LA +PL+IL+N +I +GEVVVV + ++IT+I T ER+ L Sbjct: 238 LASDPLEILVNDKIIGKGEVVVVDGNFAIQITEIGTKKERLESLR 282 >UniRef50_Q04RL4 Endoflagellar motor switch protein n=6 Tax=Leptospira RepID=Q04RL4_LEPBJ Length = 174 Score = 109 bits (274), Expect = 2e-23, Method: Composition-based stats. Identities = 41/101 (40%), Positives = 63/101 (62%) Query: 32 KSAAETVFQQFGGGDVSGTLQDIDLIMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDG 91 S + + S +++L+MD+ + LTVELGRT M IK++ L +G VV LD Sbjct: 74 PSPTPSAPRSATRQSASTQSTNLNLLMDVNLALTVELGRTNMFIKDVNGLNEGIVVELDK 133 Query: 92 LAGEPLDILINGYLIAQGEVVVVADKYGVRITDIITPSERM 132 GE LDIL NG+L+ +G++V + D YG++IT+I+ S R+ Sbjct: 134 NVGEDLDILANGHLVGRGKLVAMDDFYGIQITEIVDQSRRL 174 >UniRef50_A0LDK9 Flagellar motor switch protein FliN n=1 Tax=Magnetococcus sp. MC-1 RepID=A0LDK9_MAGSM Length = 137 Score = 109 bits (274), Expect = 2e-23, Method: Composition-based stats. Identities = 44/102 (43%), Positives = 69/102 (67%), Gaps = 3/102 (2%) Query: 35 AETVFQQFGGGDVSGTLQDIDLIMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAG 94 AE F GD+ ++++L+MD+P++++V LG IK+LLRL +GS+V L+ A Sbjct: 39 AENPFDVSTDGDLP---KNLELLMDVPLEVSVRLGSVSYQIKDLLRLNKGSLVELEKEAD 95 Query: 95 EPLDILINGYLIAQGEVVVVADKYGVRITDIITPSERMRRLS 136 +PL+I +N L+A GEVV++ DK G+RITDI++ ER+ L Sbjct: 96 DPLEIYVNDRLLAYGEVVMIKDKLGIRITDIVSLKERLENLR 137 >UniRef50_C6WJP8 Flagellar motor switch protein FliN n=1 Tax=Actinosynnema mirum DSM 43827 RepID=C6WJP8_ACTMD Length = 250 Score = 109 bits (273), Expect = 3e-23, Method: Composition-based stats. Identities = 38/77 (49%), Positives = 61/77 (79%) Query: 54 IDLIMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQGEVVV 113 ++L+ + +++T ELGRTR+T++ELL L+ G+V+ LD AG P D+L+NG LIA+GEVVV Sbjct: 168 LELLHGVEMEVTAELGRTRLTVRELLSLSNGAVIELDRAAGSPADLLVNGRLIARGEVVV 227 Query: 114 VADKYGVRITDIITPSE 130 + + +G+R+T+II P + Sbjct: 228 IDENFGIRVTEIIKPGD 244 >UniRef50_Q30SP4 Flagellar motor switch FliN n=1 Tax=Sulfurimonas denitrificans DSM 1251 RepID=Q30SP4_SULDN Length = 283 Score = 109 bits (272), Expect = 3e-23, Method: Composition-based stats. Identities = 40/114 (35%), Positives = 67/114 (58%) Query: 23 LSEQKSTSSKSAAETVFQQFGGGDVSGTLQDIDLIMDIPVKLTVELGRTRMTIKELLRLT 82 + K+ E+ S + +I LIMD+ + + V +G+ +M +K++L + Sbjct: 169 FQKDKTLGDDRKNESNKNSATVSLSSDEMSNIALIMDVKLPVKVRIGKKKMLLKDVLNMD 228 Query: 83 QGSVVALDGLAGEPLDILINGYLIAQGEVVVVADKYGVRITDIITPSERMRRLS 136 GSV+ L+ LA +PLDIL++ +IA+GEVV+V +GV+IT I T ER+ +L Sbjct: 229 IGSVIELNQLANDPLDILVDDNVIAEGEVVIVDGNFGVQITSIGTKRERLNQLK 282 >UniRef50_UPI0001C312B0 flagellar motor switch protein FliN n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C312B0 Length = 130 Score = 109 bits (272), Expect = 4e-23, Method: Composition-based stats. Identities = 40/94 (42%), Positives = 60/94 (63%) Query: 41 QFGGGDVSGTLQDIDLIMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDIL 100 D+ + D+PV+L VE+GRTRMT+ E L L GS+V L+ +AGEP+D+L Sbjct: 13 PTAANGSHTGQNDLGRLSDVPVELAVEIGRTRMTVGETLELRPGSIVVLNRMAGEPVDLL 72 Query: 101 INGYLIAQGEVVVVADKYGVRITDIITPSERMRR 134 +NG IA GEVVV+ +++G+RITD++ + Sbjct: 73 VNGTPIAHGEVVVIDEEFGLRITDVLGAPAGEQN 106 >UniRef50_Q2RKD7 Flagellar motor switch FliN n=1 Tax=Moorella thermoacetica ATCC 39073 RepID=Q2RKD7_MOOTA Length = 124 Score = 108 bits (271), Expect = 4e-23, Method: Composition-based stats. Identities = 44/117 (37%), Positives = 64/117 (54%) Query: 14 AMDDLWAEALSEQKSTSSKSAAETVFQQFGGGDVSGTLQDIDLIMDIPVKLTVELGRTRM 73 +++ + + + F G D I D+P++L ELGRTRM Sbjct: 4 TEEEIQKLLQAMEAGEDQPRVEKARFAPLQPAPAPGVTADFKRIADVPLRLKAELGRTRM 63 Query: 74 TIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQGEVVVVADKYGVRITDIITPSE 130 T+KE+L L GSV+ LD LAGEP+D+L+N +A+GEVVV+ D +GVRI + E Sbjct: 64 TVKEILDLKDGSVIVLDKLAGEPVDLLVNDIPLAKGEVVVINDAFGVRINSLAAVEE 120 >UniRef50_C1F999 Putative flagellar motor switch protein FliN n=1 Tax=Acidobacterium capsulatum ATCC 51196 RepID=C1F999_ACIC5 Length = 248 Score = 108 bits (271), Expect = 5e-23, Method: Composition-based stats. Identities = 32/118 (27%), Positives = 65/118 (55%), Gaps = 3/118 (2%) Query: 22 ALSEQKSTSSKSAAETVFQQFGGGDVSGTLQ---DIDLIMDIPVKLTVELGRTRMTIKEL 78 LSE+ + + ++AA G + + ++DL++DI V ++ G + I+EL Sbjct: 128 ELSEKAAKAPETAARPAPASSGQPSAAASPASAANVDLLLDIEVDASLRFGSRELAIREL 187 Query: 79 LRLTQGSVVALDGLAGEPLDILINGYLIAQGEVVVVADKYGVRITDIITPSERMRRLS 136 L G V+ LD +P+D+++ ++A+GEVV+V +G+R+T++ P + + + Sbjct: 188 LETGPGDVLELDRHITDPVDLVVGDKIVARGEVVLVNGNFGLRVTEVAEPKKCLESVR 245 >UniRef50_B9KJD9 Flagellar switch protein n=5 Tax=Rhodobacter sphaeroides RepID=B9KJD9_RHOSK Length = 98 Score = 108 bits (271), Expect = 5e-23, Method: Composition-based stats. Identities = 46/85 (54%), Positives = 67/85 (78%) Query: 51 LQDIDLIMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQGE 110 +++ L+ +I V+LTVE+GRT MTI++LLRL++GSVV LD LAG+PLD+L+NG IA+GE Sbjct: 14 AENLRLLENIGVRLTVEVGRTEMTIRDLLRLSEGSVVELDRLAGDPLDVLVNGTPIAKGE 73 Query: 111 VVVVADKYGVRITDIITPSERMRRL 135 VV+V +++G+R II P +R L Sbjct: 74 VVMVGERFGIRFGQIIEPEKRAESL 98 >UniRef50_C0QPC5 Flagellar motor switch protein FliN n=2 Tax=Aquificales RepID=C0QPC5_PERMH Length = 190 Score = 108 bits (270), Expect = 6e-23, Method: Composition-based stats. Identities = 37/92 (40%), Positives = 63/92 (68%) Query: 46 DVSGTLQDIDLIMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYL 105 + +DL+MDIP++++VE+G T + ++E+L+L ++V LD +P+D+ +NG L Sbjct: 96 PAGLEQEKLDLLMDIPLEVSVEIGSTHLPLEEILKLNPNNIVELDKFINQPVDLKVNGKL 155 Query: 106 IAQGEVVVVADKYGVRITDIITPSERMRRLSR 137 IA+GE+ V D +G++IT IIT ERM+ L+ Sbjct: 156 IAKGELYTVEDHFGIKITSIITVQERMKLLTE 187 >UniRef50_C2KZ02 Possible flagellar motor switch protein FliY n=1 Tax=Oribacterium sinus F0268 RepID=C2KZ02_9FIRM Length = 472 Score = 107 bits (267), Expect = 1e-22, Method: Composition-based stats. Identities = 43/137 (31%), Positives = 75/137 (54%), Gaps = 2/137 (1%) Query: 1 MSDMNNPADDNNGAMDDLWAEALSEQKSTSSKSAAETVFQQFG--GGDVSGTLQDIDLIM 58 ++ M + D+ E KS+ ++F GG + +++M Sbjct: 336 LNQMQQSQTQMLELIRDIQGGKNKEAKSSEPSLIKPLNSREFENEGGGAGENPDNREMLM 395 Query: 59 DIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQGEVVVVADKY 118 +P++++VE+GRTR +K++L TQGS+V LD +AGE D+ +NG IA+G++VVV + + Sbjct: 396 KVPLEISVEIGRTRKLVKDILDFTQGSLVVLDKMAGEQADLYVNGECIAKGDIVVVEENF 455 Query: 119 GVRITDIITPSERMRRL 135 G+RIT+I+ L Sbjct: 456 GIRITEILKKDINQESL 472 >UniRef50_D2S982 Flagellar motor switch protein FliN n=1 Tax=Geodermatophilus obscurus DSM 43160 RepID=D2S982_9ACTO Length = 249 Score = 106 bits (266), Expect = 2e-22, Method: Composition-based stats. Identities = 41/87 (47%), Positives = 58/87 (66%) Query: 41 QFGGGDVSGTLQDIDLIMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDIL 100 Q +DL+ + +++TVE+GRTRMT+ ELL L G VV LD A P D+L Sbjct: 151 QVTLPQARTQRGSLDLLRHVAMEVTVEIGRTRMTVGELLSLHPGEVVELDRAASAPADLL 210 Query: 101 INGYLIAQGEVVVVADKYGVRITDIIT 127 +NG LIA+GEVVVV + +G+RI++I+T Sbjct: 211 VNGTLIARGEVVVVDEDFGLRISEIVT 237 >UniRef50_Q44903 Flagellar motor switch protein fliN n=21 Tax=Spirochaetales RepID=FLIN_BORBU Length = 113 Score = 106 bits (266), Expect = 2e-22, Method: Composition-based stats. Identities = 40/77 (51%), Positives = 62/77 (80%) Query: 50 TLQDIDLIMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQG 109 + L+MD+ ++LTVELGRT IK++L +++G+++ LD LAGEP+DIL+NG ++A+G Sbjct: 32 DPSNFGLLMDVSMQLTVELGRTERKIKDILGMSEGTIITLDKLAGEPVDILVNGKIVAKG 91 Query: 110 EVVVVADKYGVRITDII 126 EVVV+ + +GVRIT+II Sbjct: 92 EVVVIDENFGVRITEII 108 >UniRef50_A1QZ73 Flagellar motor switch protein FliN n=7 Tax=Spirochaetaceae RepID=A1QZ73_BORT9 Length = 114 Score = 106 bits (266), Expect = 2e-22, Method: Composition-based stats. Identities = 40/77 (51%), Positives = 62/77 (80%) Query: 50 TLQDIDLIMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQG 109 + L+MD+ +++TVELGRT IK++L +++G+++ LD LAGEP+DIL+NG +IA+G Sbjct: 33 DPSNFGLLMDVSMQVTVELGRTERKIKDILGMSEGTIITLDKLAGEPVDILVNGKVIAKG 92 Query: 110 EVVVVADKYGVRITDII 126 EVVV+ + +GVRIT+II Sbjct: 93 EVVVIDENFGVRITEII 109 >UniRef50_C0C1N9 Putative uncharacterized protein n=1 Tax=Clostridium hylemonae DSM 15053 RepID=C0C1N9_9CLOT Length = 460 Score = 106 bits (265), Expect = 2e-22, Method: Composition-based stats. Identities = 44/129 (34%), Positives = 73/129 (56%), Gaps = 3/129 (2%) Query: 1 MSDMNNPADDNNGAMDDLWAEALSEQKSTSSKSAAETVFQ---QFGGGDVSGTLQDIDLI 57 M+ M + + Q + K V Q + + +++LI Sbjct: 324 MTQMMDLMRQQLEMQQVQLQQMKQTQAAGPKKIKVNPVSQPNLEQSAEETELQESNLELI 383 Query: 58 MDIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQGEVVVVADK 117 M +P++++VE+GRT+ +K++L L +GS+V LD LAGE +D+ +NG IAQG+VVVV D Sbjct: 384 MGVPLEVSVEIGRTKKLVKDVLELNKGSLVVLDKLAGEQVDLFVNGQCIAQGDVVVVDDN 443 Query: 118 YGVRITDII 126 +G+RIT+I+ Sbjct: 444 FGIRITEIL 452 >UniRef50_Q89AZ3 Flagellar motor switch protein fliN n=1 Tax=Buchnera aphidicola (Baizongia pistaciae) RepID=FLIN_BUCBP Length = 134 Score = 106 bits (265), Expect = 2e-22, Method: Composition-based stats. Identities = 47/112 (41%), Positives = 69/112 (61%), Gaps = 3/112 (2%) Query: 16 DDLWAEALSEQKSTSSKSAAETVFQQFGGGDVSGTLQDIDLIMDIPVKLTVELGRTRMTI 75 +D+ E K SK+ + D+S + IMD+PV LT+E+G ++TI Sbjct: 19 EDIKKSCEIEDKIFHSKTVNDVDLNLNSKNDIS---SKMKFIMDVPVHLTIEVGTVKITI 75 Query: 76 KELLRLTQGSVVALDGLAGEPLDILINGYLIAQGEVVVVADKYGVRITDIIT 127 K+LL L S++ LD AG+PL+IL+NGY+IA GE+VV +KYG+RI +II Sbjct: 76 KDLLELRSKSILVLDKHAGDPLNILVNGYVIATGELVVTENKYGIRIINIID 127 >UniRef50_C7M222 Flagellar motor switch protein FliN n=1 Tax=Acidimicrobium ferrooxidans DSM 10331 RepID=C7M222_ACIFD Length = 95 Score = 105 bits (263), Expect = 4e-22, Method: Composition-based stats. Identities = 40/86 (46%), Positives = 62/86 (72%) Query: 45 GDVSGTLQDIDLIMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGY 104 +V T ++ ++ ++ ++L+VELGR RM ++ LL LT G V+ LD A P+D+L+NG Sbjct: 2 PEVPETAANLAVLRNVELELSVELGRARMPVRALLALTSGDVIELDRHANAPVDVLVNGT 61 Query: 105 LIAQGEVVVVADKYGVRITDIITPSE 130 L+A+GEVVVV D++GVRI +II+ E Sbjct: 62 LVAKGEVVVVDDEFGVRILEIISSDE 87 >UniRef50_B9L5V0 Flagellar protein FliY n=1 Tax=Nautilia profundicola AmH RepID=B9L5V0_NAUPA Length = 270 Score = 105 bits (263), Expect = 4e-22, Method: Composition-based stats. Identities = 35/108 (32%), Positives = 66/108 (61%) Query: 30 SSKSAAETVFQQFGGGDVSGTLQDIDLIMDIPVKLTVELGRTRMTIKELLRLTQGSVVAL 89 + + +E ++ G ++++++++DI ++L V +G M +K+++ + GS+V L Sbjct: 163 NPSTKSEGSSTPSKAVELKGEMKNLEMLLDIKLQLRVRIGSKIMLLKDVIGMDIGSIVEL 222 Query: 90 DGLAGEPLDILINGYLIAQGEVVVVADKYGVRITDIITPSERMRRLSR 137 + LA EPLDILI I +GEVV+V +G++IT I + ER+ L + Sbjct: 223 NQLAKEPLDILIEDKKIGEGEVVIVDGNFGIQITSIGSREERLNSLKK 270 >UniRef50_Q07SI0 Flagellar motor switch protein FliN n=7 Tax=Alphaproteobacteria RepID=Q07SI0_RHOP5 Length = 132 Score = 105 bits (262), Expect = 5e-22, Method: Composition-based stats. Identities = 38/128 (29%), Positives = 74/128 (57%), Gaps = 14/128 (10%) Query: 2 SDMNNPADDNNGAMDDLWAEALSEQKSTSSKSAAETVFQQFGGGDVSGTLQDIDLIMDIP 61 +D++N A ++ A + + ++++A ET L +++ I+ IP Sbjct: 7 TDLSNAAAEHASEPFKPEAASFGKLADLAARAAEET-----------SRLTNLEPILRIP 55 Query: 62 VKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQGEVVVVAD---KY 118 V + V LG M + +L++L +G+V+ LD GEP+++++NG ++A+G VVVV D ++ Sbjct: 56 VTVQVLLGSATMPVADLMKLGRGAVIPLDHRVGEPVEVVVNGRIVARGAVVVVEDENSRF 115 Query: 119 GVRITDII 126 GV +T+I+ Sbjct: 116 GVSLTEIV 123 >UniRef50_Q1GNY9 Flagellar motor switch FliN n=2 Tax=Sphingomonadaceae RepID=Q1GNY9_SPHAL Length = 111 Score = 105 bits (262), Expect = 5e-22, Method: Composition-based stats. Identities = 34/89 (38%), Positives = 57/89 (64%) Query: 49 GTLQDIDLIMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQ 108 + DL+ + ++++VE+G T MT+ ELL L +GSV+ LD A + LDI NG LIA+ Sbjct: 21 AAAPNFDLLAGVSLRVSVEVGSTSMTLAELLALGEGSVIELDRAATDLLDIYANGTLIAK 80 Query: 109 GEVVVVADKYGVRITDIITPSERMRRLSR 137 GE+V V +YG+++ +++ P+ + R Sbjct: 81 GEIVSVDGRYGIQVAEVVAPARGLEGFER 109 >UniRef50_Q17WT1 Flagellar motor switch protein n=8 Tax=Campylobacterales RepID=Q17WT1_HELAH Length = 283 Score = 104 bits (261), Expect = 6e-22, Method: Composition-based stats. Identities = 38/116 (32%), Positives = 70/116 (60%), Gaps = 2/116 (1%) Query: 21 EALSEQKSTSSKSAAETVFQQFGGGDVSGTLQDIDLIMDIPVKLTVELGRTRMTIKELLR 80 E E +K E Q ++ +++I +++D+ + + V +G+ +M +K+++ Sbjct: 169 ETKKEHNEEGTKVVREDKIQDASLENI--EIRNISMLLDVKLNVKVRIGQKKMILKDVVS 226 Query: 81 LTQGSVVALDGLAGEPLDILINGYLIAQGEVVVVADKYGVRITDIITPSERMRRLS 136 + GSVV LD L +PL+IL++ +IA+GEVV+V +G++ITDI T ER+ +L Sbjct: 227 MDIGSVVELDQLVNDPLEILVDDKVIAKGEVVIVDGNFGIQITDIGTKKERLEQLK 282 >UniRef50_B2USQ1 Flagellar motor switch protein FliY n=14 Tax=Helicobacter pylori RepID=B2USQ1_HELPS Length = 288 Score = 104 bits (261), Expect = 7e-22, Method: Composition-based stats. Identities = 33/88 (37%), Positives = 62/88 (70%) Query: 50 TLQDIDLIMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQG 109 +++I +++D+ + + V +G+ +M +K+++ + GSVV LD L +PL+IL++ +IA+G Sbjct: 201 EIRNISMLLDVKLNVKVRIGQKKMILKDVVSMDIGSVVELDQLVNDPLEILVDDKVIAKG 260 Query: 110 EVVVVADKYGVRITDIITPSERMRRLSR 137 EVV+V +G++ITDI T ER+ +L Sbjct: 261 EVVIVDGNFGIQITDIGTKKERLEQLKH 288 >UniRef50_C1A552 Flagellar motor switch protein FliN n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1A552_GEMAT Length = 141 Score = 104 bits (260), Expect = 8e-22, Method: Composition-based stats. Identities = 41/106 (38%), Positives = 67/106 (63%) Query: 21 EALSEQKSTSSKSAAETVFQQFGGGDVSGTLQDIDLIMDIPVKLTVELGRTRMTIKELLR 80 +L E+ ++ A F + T I +++D+ + +++ELGRT MT++E+LR Sbjct: 24 SSLKEETVAAAPQARAPQLTDFEQTMLGTTEVPIGMLLDLTLPVSIELGRTSMTVQEILR 83 Query: 81 LTQGSVVALDGLAGEPLDILINGYLIAQGEVVVVADKYGVRITDII 126 L +GSV+ LD LAGEP+DI + A+GEVVV+ + +GVRIT ++ Sbjct: 84 LGRGSVIQLDRLAGEPIDIYVGDRRFAEGEVVVLGEHFGVRITRVL 129 >UniRef50_A5V6A7 Flagellar motor switch protein FliN n=4 Tax=Sphingomonadaceae RepID=A5V6A7_SPHWW Length = 107 Score = 104 bits (260), Expect = 9e-22, Method: Composition-based stats. Identities = 40/94 (42%), Positives = 60/94 (63%) Query: 44 GGDVSGTLQDIDLIMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILING 103 G ++ L+ DIP++L+VE+G T + + EL+ L GSVV LD A E LDI++NG Sbjct: 12 GAAELAGRDNLRLLADIPLRLSVEVGSTSLRLAELMDLNAGSVVELDRQANELLDIMVNG 71 Query: 104 YLIAQGEVVVVADKYGVRITDIITPSERMRRLSR 137 L+A+GEVV V K+G+R+ DI+ R+ + R Sbjct: 72 TLVAKGEVVTVNGKFGIRVVDIVAADARLPGIER 105 >UniRef50_B1I5E1 Surface presentation of antigens (SPOA) protein n=1 Tax=Candidatus Desulforudis audaxviator MP104C RepID=B1I5E1_DESAP Length = 127 Score = 104 bits (260), Expect = 9e-22, Method: Composition-based stats. Identities = 38/109 (34%), Positives = 63/109 (57%) Query: 21 EALSEQKSTSSKSAAETVFQQFGGGDVSGTLQDIDLIMDIPVKLTVELGRTRMTIKELLR 80 L + + K F+Q G + G ++ + D+ V ++ ELG+T MT++E L Sbjct: 11 SGLDREPGPTVKKVQFPRFEQAGTPGMPGVRISLEYLDDVEVDVSAELGQTAMTVREFLS 70 Query: 81 LTQGSVVALDGLAGEPLDILINGYLIAQGEVVVVADKYGVRITDIITPS 129 L +GSV+ LD AGE +D+++NG +A+GEV+V+ D + +RI I P Sbjct: 71 LHEGSVIGLDRAAGETIDVVVNGVKLARGEVLVINDLFVLRIHSIAHPQ 119 >UniRef50_A8UW94 Flagellar motor switch FliN n=1 Tax=Hydrogenivirga sp. 128-5-R1-1 RepID=A8UW94_9AQUI Length = 164 Score = 104 bits (260), Expect = 9e-22, Method: Composition-based stats. Identities = 41/101 (40%), Positives = 61/101 (60%), Gaps = 3/101 (2%) Query: 34 AAETVFQQFGGGD---VSGTLQDIDLIMDIPVKLTVELGRTRMTIKELLRLTQGSVVALD 90 AE Q+ + +D +MDIP+ + V +G T + I+EL+ L GSV+ LD Sbjct: 51 PAEAPPQEQVAEKKVTERDITKLLDRLMDIPLNVEVVVGETVIQIRELINLGPGSVLELD 110 Query: 91 GLAGEPLDILINGYLIAQGEVVVVADKYGVRITDIITPSER 131 EP+DI +NG LIA+GE+VVV +K+GVRIT+I + + Sbjct: 111 RETTEPVDIKVNGKLIAKGELVVVGEKFGVRITEIYSEERK 151 >UniRef50_B1LV08 Flagellar motor switch protein FliN n=1 Tax=Methylobacterium radiotolerans JCM 2831 RepID=B1LV08_METRJ Length = 110 Score = 104 bits (260), Expect = 9e-22, Method: Composition-based stats. Identities = 34/84 (40%), Positives = 53/84 (63%) Query: 43 GGGDVSGTLQDIDLIMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILIN 102 T D++ + D+PV ++ LG RM I +LLRL G+V+ LD GE +D+ +N Sbjct: 24 DAPTTPKTAADLEQLFDVPVMVSAVLGSARMPIGDLLRLAPGAVLELDRKVGEAIDVFVN 83 Query: 103 GYLIAQGEVVVVADKYGVRITDII 126 L+A+GEVV+V D+ GV +T+I+ Sbjct: 84 NRLVARGEVVLVEDRLGVTMTEIV 107 >UniRef50_D1B0L6 Flagellar motor switch protein FliN n=1 Tax=Sulfurospirillum deleyianum DSM 6946 RepID=D1B0L6_SULD5 Length = 286 Score = 104 bits (259), Expect = 1e-21, Method: Composition-based stats. Identities = 36/118 (30%), Positives = 63/118 (53%), Gaps = 2/118 (1%) Query: 21 EALSEQKSTSSKSAAETVFQQFGGGDV--SGTLQDIDLIMDIPVKLTVELGRTRMTIKEL 78 E + + + + + +I+LI D+ + + V +G +M +K++ Sbjct: 169 EDMPRMDTPKESIPESALIEPKKVVPSMSPEEISNIELIKDVRLPIRVRIGSKKMLLKDV 228 Query: 79 LRLTQGSVVALDGLAGEPLDILINGYLIAQGEVVVVADKYGVRITDIITPSERMRRLS 136 L + GSV+ LD LA +PL+IL+ +IA GEVV+V +GV+I +I T ER+ +L Sbjct: 229 LSMDIGSVIELDQLANDPLEILVGDKVIAMGEVVIVDGNFGVQIGEIGTKRERLEKLR 286 >UniRef50_Q2WA21 Flagellar motor switch/type III secretory pathway protein n=6 Tax=Rhodospirillales RepID=Q2WA21_MAGSA Length = 108 Score = 103 bits (257), Expect = 2e-21, Method: Composition-based stats. Identities = 36/82 (43%), Positives = 58/82 (70%) Query: 45 GDVSGTLQDIDLIMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGY 104 D+ + +D++ + DIPV+++ LG+ M + +LL+L +G+VV LD GE +DI +N Sbjct: 22 PDMPRSARDLEAVYDIPVQVSAVLGKATMQVNQLLKLGRGAVVELDRKVGEAIDIYVNNR 81 Query: 105 LIAQGEVVVVADKYGVRITDII 126 L+A+GEVVVV D+ GV +T+II Sbjct: 82 LVARGEVVVVEDRLGVTMTEII 103 >UniRef50_A1UTV7 Flagellar motor switch protein fliY n=35 Tax=Rhizobiales RepID=A1UTV7_BARBK Length = 139 Score = 103 bits (257), Expect = 2e-21, Method: Composition-based stats. Identities = 32/89 (35%), Positives = 58/89 (65%), Gaps = 3/89 (3%) Query: 43 GGGDVSGTLQDIDLIMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILIN 102 + + + +L+M IPV++ + LG T M + L+ L +GSV+ L+ G+P+DI++N Sbjct: 51 TQENTNDASNNTELVMSIPVEVQIVLGSTTMPVANLMNLGRGSVITLNKQIGDPIDIVVN 110 Query: 103 GYLIAQGEVVVVAD---KYGVRITDIITP 128 G +IA+GEV+V+ D ++GV +T++I Sbjct: 111 GRIIARGEVIVLEDDSSRFGVSLTEVIDK 139 >UniRef50_B9JRN7 Flagellar motor switch protein FliN n=2 Tax=Rhizobiales RepID=B9JRN7_AGRVS Length = 220 Score = 103 bits (256), Expect = 2e-21, Method: Composition-based stats. Identities = 31/89 (34%), Positives = 59/89 (66%), Gaps = 3/89 (3%) Query: 44 GGDVSGTLQDIDLIMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILING 103 S ++DLIMDIP+ + + LG +RM + L+ L +G+++ALD GEP++I++NG Sbjct: 130 QAPGSALDSNLDLIMDIPIDVQIVLGSSRMPVSGLMNLEEGAIIALDKKIGEPVEIMVNG 189 Query: 104 YLIAQGEVVVVAD---KYGVRITDIITPS 129 IA+GE+ V+ + ++GV++ ++++ Sbjct: 190 RRIARGEITVLENDDTRFGVKLIEVMSTK 218 >UniRef50_B1ZL53 Flagellar motor switch protein FliN n=6 Tax=Rhizobiales RepID=B1ZL53_METPB Length = 108 Score = 103 bits (256), Expect = 2e-21, Method: Composition-based stats. Identities = 36/101 (35%), Positives = 63/101 (62%), Gaps = 3/101 (2%) Query: 32 KSAAETVFQQFGGGDVSGTLQDIDLIMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDG 91 S+ G G +++D I+ IPV + V LG M + +L++L +G+VV LD Sbjct: 2 SSSPFPETDLAGNEPRVGDGRNLDSILRIPVLMQVVLGSATMPVADLMKLGRGAVVPLDH 61 Query: 92 LAGEPLDILINGYLIAQGEVVVVAD---KYGVRITDIITPS 129 GEP+D+++NG +IA+GE+V+V + ++GV +T+++ PS Sbjct: 62 RVGEPVDVMVNGRVIARGEIVIVEEDNSRFGVSLTEVVGPS 102 >UniRef50_A6DBQ2 Flagellar motor switch protein n=1 Tax=Caminibacter mediatlanticus TB-2 RepID=A6DBQ2_9PROT Length = 269 Score = 103 bits (256), Expect = 2e-21, Method: Composition-based stats. Identities = 33/99 (33%), Positives = 59/99 (59%) Query: 39 FQQFGGGDVSGTLQDIDLIMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLD 98 + +D++MD+ ++L V +G+ M +K+++ + GS+V LD LA EPLD Sbjct: 170 ISESSHELNKEIPSQLDMLMDVKLQLRVRIGKKTMLLKDVISMDIGSIVELDQLANEPLD 229 Query: 99 ILINGYLIAQGEVVVVADKYGVRITDIITPSERMRRLSR 137 ILI I +GEVV+V +G++IT I + ++R+ + + Sbjct: 230 ILIEDKKIGEGEVVIVDGNFGIQITSIGSKADRLNSMKK 268 >UniRef50_Q03593 Flagellar motor switch protein fliN n=21 Tax=Alphaproteobacteria RepID=FLIN_CAUCR Length = 110 Score = 103 bits (256), Expect = 3e-21, Method: Composition-based stats. Identities = 35/77 (45%), Positives = 54/77 (70%) Query: 50 TLQDIDLIMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQG 109 T D+ + D+PV ++ LGR M++ +LL+L QGS++ LD GE +DI +N L+A+G Sbjct: 28 TAADLAPVFDVPVNISAVLGRANMSVAQLLQLGQGSILELDRKVGEAIDIYVNNRLVARG 87 Query: 110 EVVVVADKYGVRITDII 126 EVVVV ++ GV +T+II Sbjct: 88 EVVVVDERLGVTMTEII 104 >UniRef50_C0GJF0 CheC, inhibitor of MCP methylation / FliN fusion protein n=1 Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GJF0_9FIRM Length = 541 Score = 102 bits (255), Expect = 3e-21, Method: Composition-based stats. Identities = 39/109 (35%), Positives = 61/109 (55%), Gaps = 2/109 (1%) Query: 25 EQKSTSSKSAAETVFQQFGGGDVSGTLQ--DIDLIMDIPVKLTVELGRTRMTIKELLRLT 82 E + + Q+ + +DLI DIPV++T LGR ++ +KEL+ Sbjct: 432 EDVEPVMSTEPQDWLQESSPESTLPEERGLQLDLIRDIPVEITGLLGRRKLPLKELMAAK 491 Query: 83 QGSVVALDGLAGEPLDILINGYLIAQGEVVVVADKYGVRITDIITPSER 131 GSVV L A P+DIL NG L+A+GEVV +++G++IT+I+ +R Sbjct: 492 AGSVVELSCPADAPVDILANGKLVARGEVVHYNERFGIKITEIMQDWKR 540 >UniRef50_C6NYG7 Flagellar motor switch protein FliN n=1 Tax=Acidithiobacillus caldus ATCC 51756 RepID=C6NYG7_9GAMM Length = 120 Score = 102 bits (255), Expect = 3e-21, Method: Composition-based stats. Identities = 38/114 (33%), Positives = 68/114 (59%), Gaps = 7/114 (6%) Query: 28 STSSKSAAETVFQQFGGGDVS------GTLQDIDLIMDIPVKLTVELGRTRMTIKELLRL 81 ++ + + F D + +DL++++P++++VELGRTRM K +L+L Sbjct: 3 DSTDDATNPLPIEHFDSSDETNEKLLTPGSPSVDLLVNVPMRISVELGRTRMPFKNILQL 62 Query: 82 TQGSVVALDGLAGEPLDILINGYLIAQGEVVVVA-DKYGVRITDIITPSERMRR 134 +QGSV+ L+ GEPL I ING + A GE V+V +++GVR+T ++ + ++ Sbjct: 63 SQGSVIELNRAVGEPLTIYINGEIFAYGEAVLVNQERFGVRLTALVNKEDLIQN 116 >UniRef50_Q0EZ61 Flagellar protein n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0EZ61_9PROT Length = 98 Score = 101 bits (253), Expect = 5e-21, Method: Composition-based stats. Identities = 34/97 (35%), Positives = 56/97 (57%) Query: 40 QQFGGGDVSGTLQDIDLIMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDI 99 +++ IM +P++++VELGR ++ + + RL +G V+ ++ A + I Sbjct: 2 SDTATATEHPQTANLEAIMHVPLEISVELGRIKLPLHTIARLNRGMVIEMNKEANAEVQI 61 Query: 100 LINGYLIAQGEVVVVADKYGVRITDIITPSERMRRLS 136 L NG + A+GEVV DK GVRIT+I+ S R+ LS Sbjct: 62 LANGSIFAKGEVVSTGDKLGVRITEIVPASARISSLS 98 >UniRef50_A4SI07 Lateral flagellar motor switch protein, lfiN n=2 Tax=Aeromonas RepID=A4SI07_AERS4 Length = 125 Score = 101 bits (252), Expect = 7e-21, Method: Composition-based stats. Identities = 45/124 (36%), Positives = 73/124 (58%), Gaps = 13/124 (10%) Query: 4 MNNPADDNNGAMDDLWAEALSEQKSTSSKSAAETVFQQFGGGDVSGTLQDIDLIMDIPVK 63 MN+P D + +D L+ + +S + + S +D+ IPVK Sbjct: 6 MNDPLDLDG--LDQLFGDDISMPSAADYMAPTS-----------SSKQRDLSFFRQIPVK 52 Query: 64 LTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQGEVVVVADKYGVRIT 123 +T+E+ T +++ EL+R+ +G+V+ LD LAGE LD+ +NG L+A+GEVVVV KYG+R+ Sbjct: 53 VTLEVASTEVSLGELMRVEEGAVIELDKLAGETLDVRVNGRLLAKGEVVVVNGKYGLRLV 112 Query: 124 DIIT 127 D+I Sbjct: 113 DVID 116 >UniRef50_A6CER1 Flagellar motor switch protein fliN n=1 Tax=Planctomyces maris DSM 8797 RepID=A6CER1_9PLAN Length = 226 Score = 101 bits (252), Expect = 7e-21, Method: Composition-based stats. Identities = 35/82 (42%), Positives = 58/82 (70%) Query: 48 SGTLQDIDLIMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIA 107 + + ++ + L +ELGRT + I+E+L++ +G VV LD LAG+P+DIL+NG +IA Sbjct: 144 PEEAMKLSSLQNVELDLCIELGRTELLIEEVLKMKEGVVVPLDKLAGDPVDILVNGRIIA 203 Query: 108 QGEVVVVADKYGVRITDIITPS 129 +GEV+V+ D + VR+ +II+P Sbjct: 204 RGEVLVLNDNFCVRVAEIISPE 225 >UniRef50_D0I457 Flagellar motor switch protein FliN n=2 Tax=Vibrionaceae RepID=D0I457_VIBHO Length = 116 Score = 100 bits (250), Expect = 1e-20, Method: Composition-based stats. Identities = 34/96 (35%), Positives = 59/96 (61%) Query: 41 QFGGGDVSGTLQDIDLIMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDIL 100 + D+ I +IPV LT+E+ T + + +L+ + GSV+ LD L+GEP+D+ Sbjct: 20 PSSDAPAPVSSNDMRFIRNIPVNLTLEVASTELKVGDLMNINVGSVIELDKLSGEPMDVR 79 Query: 101 INGYLIAQGEVVVVADKYGVRITDIITPSERMRRLS 136 +NG L+ EVVVV +KYG+R+ +++ + +R L+ Sbjct: 80 VNGTLLGHAEVVVVNNKYGLRLVNVVDEKDMLRGLA 115 >UniRef50_B6QZA8 Flagellar motor switch protein n=1 Tax=Pseudovibrio sp. JE062 RepID=B6QZA8_9RHOB Length = 111 Score = 99 bits (248), Expect = 2e-20, Method: Composition-based stats. Identities = 40/99 (40%), Positives = 60/99 (60%), Gaps = 1/99 (1%) Query: 32 KSAAETVFQQFGGGDVSGTLQDIDLIMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDG 91 +S + GGG V +D++ + D+PV+L LG T+M + +LL L G V+ LD Sbjct: 14 QSTQRAGTDEDGGGGVKAA-EDLEAVFDVPVQLAAVLGHTKMKVSDLLHLDTGIVMELDR 72 Query: 92 LAGEPLDILINGYLIAQGEVVVVADKYGVRITDIITPSE 130 GE +D+ +N LIA+GEVV+V DK GV +T+II + Sbjct: 73 KVGEAIDVYVNNRLIARGEVVLVEDKLGVTMTEIIKADK 111 >UniRef50_A5FYJ9 Flagellar motor switch protein FliN n=17 Tax=Alphaproteobacteria RepID=A5FYJ9_ACICJ Length = 132 Score = 99 bits (248), Expect = 2e-20, Method: Composition-based stats. Identities = 34/85 (40%), Positives = 59/85 (69%), Gaps = 1/85 (1%) Query: 43 GGGDVSGTLQDIDLIMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILIN 102 G + +D++ + D+PV ++ LGR+ M + +LL+L +G+VV LD AG+P+DI +N Sbjct: 42 DGPETQRPSRDLEAVYDVPVLVSAVLGRSTMQVSQLLKLGRGAVVELDRKAGDPIDIFVN 101 Query: 103 GYLIAQGEVVVVAD-KYGVRITDII 126 LIA+GEVV++ + K G+ +T+I+ Sbjct: 102 NRLIARGEVVMLDETKLGITMTEIV 126 >UniRef50_Q57259 Flagellar motor switch protein fliN n=2 Tax=Rhizobium/Agrobacterium group RepID=FLIN_AGRT5 Length = 179 Score = 99.2 bits (246), Expect = 4e-20, Method: Composition-based stats. Identities = 37/126 (29%), Positives = 69/126 (54%), Gaps = 3/126 (2%) Query: 8 ADDNNGAMDDLWAEALSEQKSTSSKSAAETVFQQFGGGDVSGTLQDIDLIMDIPVKLTVE 67 + D +DL A AA SG +++++IMDIP+ + + Sbjct: 53 STDEVSTDNDLSAFGGGAADFAMDDFAAAPQVAGVKAPLGSGLSENMEMIMDIPIDVQIV 112 Query: 68 LGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQGEVVVVAD---KYGVRITD 124 LG +RM + L+ L +G+ +ALD GEP++I++NG IA+GE+ V+ D ++GV++ + Sbjct: 113 LGTSRMLVSGLMSLEEGATIALDRKIGEPVEIMVNGRRIARGEITVLEDDDTRFGVKLIE 172 Query: 125 IITPSE 130 +++ + Sbjct: 173 VLSTRK 178 >UniRef50_B6IW97 Flagellar motor switch protein FliN n=1 Tax=Rhodospirillum centenum SW RepID=B6IW97_RHOCS Length = 105 Score = 98.4 bits (244), Expect = 7e-20, Method: Composition-based stats. Identities = 35/91 (38%), Positives = 57/91 (62%) Query: 43 GGGDVSGTLQDIDLIMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILIN 102 SG + + I+ +PV+++V LGR RM I +LLRL VV L+ + GEP+D+ +N Sbjct: 6 SDAAESGETPERNSILSVPVQVSVRLGRRRMRISQLLRLGPSDVVDLERMVGEPVDLFVN 65 Query: 103 GYLIAQGEVVVVADKYGVRITDIITPSERMR 133 L+A+GE+VVV + G+ I +++ + R R Sbjct: 66 DRLVARGELVVVDGRLGLTIVELMPQASRGR 96 >UniRef50_A5P6I8 Flagellar motor switch protein n=1 Tax=Erythrobacter sp. SD-21 RepID=A5P6I8_9SPHN Length = 96 Score = 98.0 bits (243), Expect = 9e-20, Method: Composition-based stats. Identities = 35/74 (47%), Positives = 53/74 (71%) Query: 56 LIMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQGEVVVVA 115 LI DI V+LTVELGR M ++++L L + SV+ LD L EPLD+ +NG LIA+GEV+ Sbjct: 10 LIQDIDVRLTVELGRKSMRLRDVLALGESSVIELDRLTDEPLDMFVNGKLIARGEVIAQG 69 Query: 116 DKYGVRITDIITPS 129 +++ +R+ +I+ S Sbjct: 70 NRFAIRVLEIVGAS 83 >UniRef50_B6R821 Flagellar motor switch protein FliN n=2 Tax=Rhodobacteraceae RepID=B6R821_9RHOB Length = 138 Score = 97.6 bits (242), Expect = 1e-19, Method: Composition-based stats. Identities = 42/134 (31%), Positives = 72/134 (53%), Gaps = 8/134 (5%) Query: 4 MNNPADDNNGAMDDLWAEALSEQKSTSSKSAAETVFQQFGGGDVSGTL-----QDIDLIM 58 M++ + ++ A+ W A SE + +A Q G +++D ++ Sbjct: 1 MSSSNEMSDEALALQWEAAASEAEMDMDMAAPAASAQPAASAPEKGVSDENVDRNLDAVL 60 Query: 59 DIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQGEVVVVAD-- 116 IPV + V LG M + LL+L +G+V+ LD GEP+DI++NG +A+GE+VVV D Sbjct: 61 GIPVDMQVVLGSATMPVASLLKLGRGAVIPLDHRVGEPVDIVVNGRTVARGEIVVVEDDN 120 Query: 117 -KYGVRITDIITPS 129 ++GV +T+I+ Sbjct: 121 SRFGVSLTEIVGAK 134 >UniRef50_A6F9R7 Flagellar motor switch protein n=1 Tax=Moritella sp. PE36 RepID=A6F9R7_9GAMM Length = 122 Score = 97.2 bits (241), Expect = 1e-19, Method: Composition-based stats. Identities = 33/88 (37%), Positives = 55/88 (62%) Query: 40 QQFGGGDVSGTLQDIDLIMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDI 99 + +D+ +IP+ +T+E+ T++ I +L+ L+ G+V+ LD LA EPLD+ Sbjct: 27 SSLMTAENKPLKKDLSFFHNIPIDVTLEVASTKLVIGDLMMLSSGAVIELDKLADEPLDL 86 Query: 100 LINGYLIAQGEVVVVADKYGVRITDIIT 127 +NG L+A EVVVV KYGV++ D++ Sbjct: 87 KVNGQLLATAEVVVVNGKYGVKLIDVVD 114 >UniRef50_O54245 Flagellar motor switch protein fliN n=15 Tax=Rhizobiales RepID=FLIN_RHIME Length = 198 Score = 96.8 bits (240), Expect = 2e-19, Method: Composition-based stats. Identities = 33/85 (38%), Positives = 57/85 (67%), Gaps = 3/85 (3%) Query: 44 GGDVSGTLQDIDLIMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILING 103 SG ++DLIMDIP+ + + LG +RM + L+ LT+G+ +ALD GEP++I++NG Sbjct: 109 TAPGSGMTANMDLIMDIPIDVQIVLGTSRMQVSGLMALTEGATIALDRKIGEPVEIMVNG 168 Query: 104 YLIAQGEVVVVAD---KYGVRITDI 125 +I +GE+ V+ ++GV++ +I Sbjct: 169 RVIGRGEITVLEGDVTRFGVKLLEI 193 >UniRef50_A7K1M2 Flagellar motor switch protein FliN n=17 Tax=Vibrionaceae RepID=A7K1M2_VIBSE Length = 123 Score = 96.8 bits (240), Expect = 2e-19, Method: Composition-based stats. Identities = 38/113 (33%), Positives = 61/113 (53%), Gaps = 10/113 (8%) Query: 23 LSEQKSTSSKSAAETVFQQFGGGDVSGTL----------QDIDLIMDIPVKLTVELGRTR 72 +SE T++ A E F F D +D+ IPV +T+E+ Sbjct: 1 MSEAPETNAFDAEELNFDDFQLEDFEAESTLQQEPATAERDLSFFKSIPVTVTLEVASKE 60 Query: 73 MTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQGEVVVVADKYGVRITDI 125 + + +L++ +G+V+ L+ L GEPLD+ +NG L+ EVVVV DKYG+R+ D+ Sbjct: 61 IPLGDLMKAGEGTVIELEKLNGEPLDVKVNGSLMGHAEVVVVNDKYGLRLIDV 113 >UniRef50_B6IQ95 Flagellar motor switch protein FliN n=1 Tax=Rhodospirillum centenum SW RepID=B6IQ95_RHOCS Length = 119 Score = 96.8 bits (240), Expect = 2e-19, Method: Composition-based stats. Identities = 33/81 (40%), Positives = 53/81 (65%), Gaps = 1/81 (1%) Query: 50 TLQDIDLIMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQG 109 ++ I ++PV + V LGRT M + +LL+L +G+VV L+ GE +D+ +N LIA+G Sbjct: 35 DRDELRAIFNVPVNVQVVLGRTTMPVSQLLKLGRGAVVELNRKVGEAVDVFVNDRLIARG 94 Query: 110 EVVVVAD-KYGVRITDIITPS 129 EVV+V D + GV +T+I+ Sbjct: 95 EVVIVDDGRLGVTMTEIVKAE 115 >UniRef50_Q0G104 Flagellar motor switch FliN protein:Surface presentation of antigens (SPOA) protein n=1 Tax=Fulvimarina pelagi HTCC2506 RepID=Q0G104_9RHIZ Length = 131 Score = 96.8 bits (240), Expect = 2e-19, Method: Composition-based stats. Identities = 42/132 (31%), Positives = 74/132 (56%), Gaps = 12/132 (9%) Query: 4 MNNPADDNNGAMDDLWAEALSEQKSTSSKSAAETVFQQFGGGDVSGTLQDIDLIMDIPVK 63 M +P D + ++ + E+ F G D D+DL++D+ V Sbjct: 1 MIDPNDPHGSEIEHSGQPYMDEEGGEEDDRRP-----DFRGADKM----DLDLVLDVSVT 51 Query: 64 LTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQGEVVVV---ADKYGV 120 + V LG RM++ ELL+L +GS+V LD G+P+D+++NG +IA+GE+VV+ ++GV Sbjct: 52 MQVVLGSARMSVSELLKLNRGSIVKLDTKVGDPIDVVVNGRVIARGEIVVLDQDDQQFGV 111 Query: 121 RITDIITPSERM 132 +T++ TP ++ Sbjct: 112 TLTEVATPGSKL 123 >UniRef50_B8EL08 Flagellar motor switch protein FliN n=2 Tax=Beijerinckiaceae RepID=B8EL08_METSB Length = 110 Score = 96.5 bits (239), Expect = 2e-19, Method: Composition-based stats. Identities = 38/104 (36%), Positives = 63/104 (60%), Gaps = 3/104 (2%) Query: 28 STSSKSAAETVFQQFGGGDVSGTLQDIDLIMDIPVKLTVELGRTRMTIKELLRLTQGSVV 87 S + ETV + ++++ I+ IPV + V LG M + LL+L +G+V+ Sbjct: 2 SDAQIEVNETVGGGEEPPGRANVSRNLETILRIPVVVQVVLGSAVMPVSHLLKLGRGAVI 61 Query: 88 ALDGLAGEPLDILINGYLIAQGEVVVVAD---KYGVRITDIITP 128 LD GEP+D+++NG +IA+GE+VVV D ++GV +T+I+ P Sbjct: 62 PLDHRVGEPVDVVVNGRIIARGEIVVVEDDNSRFGVSLTEIVGP 105 >UniRef50_A4Y0Q2 Flagellar motor switch protein FliN n=1 Tax=Pseudomonas mendocina ymp RepID=A4Y0Q2_PSEMY Length = 123 Score = 96.5 bits (239), Expect = 2e-19, Method: Composition-based stats. Identities = 48/121 (39%), Positives = 68/121 (56%), Gaps = 9/121 (7%) Query: 4 MNNPADDNNGAMDDLWAEALSEQKSTSSKSAAETVFQQFGGGDVSGTLQDIDLIMDIPVK 63 M++P DN+ D L +A S+ AE S QD+ IPV Sbjct: 1 MSSPISDNDF--DSLINDAGLNLDEPVSEPVAE-------QAPASLPQQDLSFFGKIPVN 51 Query: 64 LTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQGEVVVVADKYGVRIT 123 +T+E+ T +T+KEL+ + GSV+ALD LAGEPLD+ +NG L A+ EVVV+ YG+RI Sbjct: 52 VTLEVASTEITLKELMDVDAGSVIALDKLAGEPLDVKVNGALFAKAEVVVMNGNYGLRIV 111 Query: 124 D 124 + Sbjct: 112 E 112 >UniRef50_C8W1G7 Surface presentation of antigens (SPOA) protein n=1 Tax=Desulfotomaculum acetoxidans DSM 771 RepID=C8W1G7_DESAS Length = 128 Score = 96.5 bits (239), Expect = 3e-19, Method: Composition-based stats. Identities = 35/101 (34%), Positives = 54/101 (53%) Query: 28 STSSKSAAETVFQQFGGGDVSGTLQDIDLIMDIPVKLTVELGRTRMTIKELLRLTQGSVV 87 + + + F G I I D+PV +T ELG +T++E+L L+ G ++ Sbjct: 15 KSEKTAVQKLRFTPLTPGGEQRIKTSIKHIEDVPVIVTAELGGAALTVREVLNLSPGMLI 74 Query: 88 ALDGLAGEPLDILINGYLIAQGEVVVVADKYGVRITDIITP 128 LD LAGE + + IN +GEV+V+ D YG+RIT + P Sbjct: 75 KLDVLAGELVTMSINNQKFGRGEVMVINDNYGIRITSVFKP 115 >UniRef50_B1ZR34 Flagellar motor switch protein FliN n=3 Tax=Verrucomicrobia RepID=B1ZR34_OPITP Length = 84 Score = 95.3 bits (236), Expect = 5e-19, Method: Composition-based stats. Identities = 31/77 (40%), Positives = 56/77 (72%) Query: 54 IDLIMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQGEVVV 113 +D+++D+ VK+TV+LG ++ ++E+L L+ GSVV L A +P+ + +N L+A GEVVV Sbjct: 6 LDIVLDVKVKVTVQLGSVQLPMREVLELSPGSVVQLTQHASDPVGLFVNDQLVAYGEVVV 65 Query: 114 VADKYGVRITDIITPSE 130 V D +G++IT+++ + Sbjct: 66 VEDNFGIKITELVGSEK 82 >UniRef50_A1RF65 Flagellar motor switch protein FliN n=8 Tax=Shewanella RepID=A1RF65_SHESW Length = 128 Score = 94.9 bits (235), Expect = 6e-19, Method: Composition-based stats. Identities = 36/79 (45%), Positives = 55/79 (69%) Query: 47 VSGTLQDIDLIMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLI 106 S L++ + +PV++T+EL M++ EL R+ +G V+ALD + GEPLDI +NG L+ Sbjct: 39 QSRKLKNNNFFQQLPVQVTLELASAEMSLGELNRMGEGDVIALDRMVGEPLDIRVNGALL 98 Query: 107 AQGEVVVVADKYGVRITDI 125 +GEVV VA +YGVR+ +I Sbjct: 99 GRGEVVEVAGRYGVRLLEI 117 >UniRef50_Q11LL6 Flagellar motor switch protein FliN n=3 Tax=Phyllobacteriaceae RepID=Q11LL6_MESSB Length = 121 Score = 94.9 bits (235), Expect = 8e-19, Method: Composition-based stats. Identities = 36/104 (34%), Positives = 61/104 (58%), Gaps = 3/104 (2%) Query: 25 EQKSTSSKSAAETVFQQFGGGDVSGTLQDIDLIMDIPVKLTVELGRTRMTIKELLRLTQG 84 + T K+ E + + ++DIPV+L + LG MT+ EL+ L +G Sbjct: 11 SEGGTLDKAIEEMRSALHEEAQPNMDAEKTGFLVDIPVELQIVLGSAEMTVSELMALQRG 70 Query: 85 SVVALDGLAGEPLDILINGYLIAQGEVVVVAD---KYGVRITDI 125 S V+LD GEP++I++NG LIA+GE+ ++ + ++GVR+T+I Sbjct: 71 STVSLDRRIGEPVEIMVNGRLIARGEITILENDPSRFGVRLTEI 114 >UniRef50_A4THZ3 Flagellar switch protein n=26 Tax=Enterobacteriaceae RepID=A4THZ3_YERPP Length = 137 Score = 94.5 bits (234), Expect = 8e-19, Method: Composition-based stats. Identities = 41/131 (31%), Positives = 66/131 (50%), Gaps = 2/131 (1%) Query: 1 MSDMNNPADDNNGAMDDLWAEALSEQKSTSSKSAAETVF--QQFGGGDVSGTLQDIDLIM 58 M+D +++ L A+S + S + + + + + L Sbjct: 1 MTDQQIELNNDLDFTLALDESAISPTEHFDSVINSPEIINTPEKTATKTDEQKRKMSLFS 60 Query: 59 DIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQGEVVVVADKY 118 IPV LT+E+ + + ELL + SV+ LD LAGEPLDI +NG + Q EVVV+ +KY Sbjct: 61 RIPVTLTLEVASVEIPLSELLTVNNDSVIELDKLAGEPLDIRVNGIMFGQAEVVVINEKY 120 Query: 119 GVRITDIITPS 129 G+RI +I + + Sbjct: 121 GLRIININSQN 131 >UniRef50_C0GJH0 Surface presentation of antigens (SPOA) protein n=1 Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GJH0_9FIRM Length = 150 Score = 94.5 bits (234), Expect = 1e-18, Method: Composition-based stats. Identities = 33/128 (25%), Positives = 59/128 (46%), Gaps = 4/128 (3%) Query: 2 SDMNNPADDNNGAMDDLWAEALSEQKSTSSKSAAETVFQQFGGGDVSGTLQDIDLIMDIP 61 D+ + E + ++ F +F + ++ +P Sbjct: 20 PDLADEVKQEKEGSQP----KQEEPPAAPAEEVERVEFPEFVQAPQGAKERGVNFFESVP 75 Query: 62 VKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQGEVVVVADKYGVR 121 V L +ELG +T++E+L L + S++ LD LAGE + +NG +A GEVVV+ D +G R Sbjct: 76 VTLDLELGAATLTVREILALQKDSIIRLDKLAGENAALCVNGKPLASGEVVVINDNFGFR 135 Query: 122 ITDIITPS 129 + ++ S Sbjct: 136 VAEVGGSS 143 >UniRef50_A7H064 Flagellar motor switch protein FliN n=8 Tax=Epsilonproteobacteria RepID=A7H064_CAMC5 Length = 105 Score = 94.5 bits (234), Expect = 1e-18, Method: Composition-based stats. Identities = 30/92 (32%), Positives = 50/92 (54%) Query: 46 DVSGTLQDIDLIMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYL 105 + G + D +MDI V ELG T ++I ELL+ GSV+ L+ AGE +++ IN + Sbjct: 11 EQLGLFKSYDELMDISVDFIAELGTTTISINELLKFEAGSVIDLEKPAGESVELYINNRI 70 Query: 106 IAQGEVVVVADKYGVRITDIITPSERMRRLSR 137 +GEV+V +RI +I+ ++ + Sbjct: 71 FGKGEVMVYEKNLAIRINEILDSKSVIQYFKK 102 >UniRef50_A1T0L0 Surface presentation of antigens (SPOA) protein n=1 Tax=Psychromonas ingrahamii 37 RepID=A1T0L0_PSYIN Length = 120 Score = 94.1 bits (233), Expect = 1e-18, Method: Composition-based stats. Identities = 36/93 (38%), Positives = 50/93 (53%) Query: 37 TVFQQFGGGDVSGTLQDIDLIMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEP 96 + + + + DIPV +TVE+G +T+KELL + SV+ L G+ Sbjct: 26 NDISDAPPSSSAKKAKSLSFLNDIPVHVTVEVGAKTVTLKELLEIKNDSVLMLTKENGKA 85 Query: 97 LDILINGYLIAQGEVVVVADKYGVRITDIITPS 129 LDI +NG L A GEVVV YGV+ITDI+ Sbjct: 86 LDIKVNGKLFAYGEVVVANGHYGVKITDIVNKD 118 >UniRef50_C5JB71 Flagellar motor switch/type III secretory pathway protein n=1 Tax=uncultured bacterium RepID=C5JB71_9BACT Length = 117 Score = 94.1 bits (233), Expect = 1e-18, Method: Composition-based stats. Identities = 34/78 (43%), Positives = 55/78 (70%) Query: 54 IDLIMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQGEVVV 113 ++ + ++PV++T LG + + ++L+L +G+VV LD + GEP+DI N LIA+GEVVV Sbjct: 40 MEAVYEVPVEVTAVLGTASLQVSQILKLGRGAVVELDRIVGEPVDINANNRLIARGEVVV 99 Query: 114 VADKYGVRITDIITPSER 131 V D+ ++ITDII + R Sbjct: 100 VEDRLAIQITDIIRSNIR 117 >UniRef50_D1AZW0 Surface presentation of antigens (SPOA) protein n=3 Tax=Campylobacteraceae RepID=D1AZW0_SULD5 Length = 103 Score = 94.1 bits (233), Expect = 1e-18, Method: Composition-based stats. Identities = 29/87 (33%), Positives = 50/87 (57%) Query: 51 LQDIDLIMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQGE 110 L + ++DI V ELG T +TI+ LL+L +GSV+ L+ AGE +++ IN + +GE Sbjct: 14 LSGFENLLDISVDFVAELGTTTLTIQRLLKLEKGSVIDLEKPAGESVELYINNKIFGKGE 73 Query: 111 VVVVADKYGVRITDIITPSERMRRLSR 137 V+V +RI +I+ ++ + Sbjct: 74 VMVYEKNLAIRINEILDSKTVIQYFKK 100 >UniRef50_A5D0I4 Flagellar motor switch/type III secretory pathway protein n=1 Tax=Pelotomaculum thermopropionicum SI RepID=A5D0I4_PELTS Length = 126 Score = 93.8 bits (232), Expect = 1e-18, Method: Composition-based stats. Identities = 37/111 (33%), Positives = 63/111 (56%), Gaps = 5/111 (4%) Query: 27 KSTSSKSAAETVFQQFGGGDVSGTLQ-DIDLIMDIPVKLTVELGRTRMTIKELLRLTQGS 85 S+S + F ++ + + D+ ++++VELG+T M ++E+L L QGS Sbjct: 14 ASSSDADIKKVQFPPLTPVKGMDRVKTSMSHLEDVQIEISVELGQTVMKVREVLGLEQGS 73 Query: 86 VVALDGLAGEPLDILINGYLIAQGEVVVVADKYGVRITDIITPSERMRRLS 136 V+ LD GE +++++N A+GEVVV+ D +GVRIT I R++ L Sbjct: 74 VIRLDKAIGEAVEVVLNEQRFARGEVVVINDSFGVRITSI----NRVQNLK 120 >UniRef50_Q30RD7 Surface presentation of antigens (SPOA) protein n=15 Tax=Epsilonproteobacteria RepID=Q30RD7_SULDN Length = 111 Score = 93.4 bits (231), Expect = 2e-18, Method: Composition-based stats. Identities = 30/113 (26%), Positives = 61/113 (53%), Gaps = 4/113 (3%) Query: 25 EQKSTSSKSAAETVFQQFGGGDVSGTLQDIDLIMDIPVKLTVELGRTRMTIKELLRLTQG 84 +K + A E +F + + D ++D+ V+ +LG T +++ E+L+L +G Sbjct: 1 MKKRRHTYGAKEEIFDS----ESELSWMDYSGLLDMEVEFISDLGETELSVGEILQLKKG 56 Query: 85 SVVALDGLAGEPLDILINGYLIAQGEVVVVADKYGVRITDIITPSERMRRLSR 137 S++ L AGE ++ +NG ++ +GEV+V +RI +++ S + LS+ Sbjct: 57 SIIDLKKPAGESVETYVNGRILGRGEVMVYEKNLAIRINEVLDSSAVLYHLSK 109 >UniRef50_C6XFK8 Putative flagellar motor switch protein n=1 Tax=Candidatus Liberibacter asiaticus str. psy62 RepID=C6XFK8_LIBAP Length = 147 Score = 93.0 bits (230), Expect = 2e-18, Method: Composition-based stats. Identities = 39/129 (30%), Positives = 66/129 (51%), Gaps = 6/129 (4%) Query: 4 MNNPADDNNGAMDDLWAEALSEQKSTSSKSAAETVFQQFGGGDVSGTLQDIDLIMDIPVK 63 ++NP D N + +E L ++ + S + + + DLIM+IPVK Sbjct: 22 IDNPLQDTNVSSPTNNSEMLIQKNDVDNIS---EPISSDSNNILEKSTDNFDLIMNIPVK 78 Query: 64 LTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQGEVVVVAD---KYGV 120 + + LG M I L+ L++G V+ LD GE +DI IN IA+GE+ ++ + +GV Sbjct: 79 MQIILGSCCMQISNLVNLSKGDVITLDKRVGESVDITINNQKIAKGEITIMEEDDTHFGV 138 Query: 121 RITDIITPS 129 R+ +I+ Sbjct: 139 RVIEILNAQ 147 >UniRef50_Q7UIS4 Probable flagellar motor switch protein fliN [Fragment] n=1 Tax=Rhodopirellula baltica RepID=Q7UIS4_RHOBA Length = 144 Score = 93.0 bits (230), Expect = 3e-18, Method: Composition-based stats. Identities = 29/124 (23%), Positives = 54/124 (43%), Gaps = 14/124 (11%) Query: 7 PADDNNGAMDDLWAEALSEQKSTSSKSAAETVFQQFGGGDVSGTLQDIDLIMDIPVKLTV 66 P D + +E +E K T ++++ + ++ I + V Sbjct: 34 PVDKRCVRIQGRMSENATEDKPTEPSPPTSSMYK--------------EKVLKIRTTVNV 79 Query: 67 ELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQGEVVVVADKYGVRITDII 126 L + ++++L L GS++ D PL + G+ IA GE V + DK+G+R+ +I Sbjct: 80 TLAEKKEPLRKILALVPGSMLTFDVHCDRPLTLRAGGHPIATGETVKIGDKFGLRVREIG 139 Query: 127 TPSE 130 P E Sbjct: 140 VPKE 143 >UniRef50_C9PEF6 Flagellar motor switch protein FliN n=1 Tax=Vibrio furnissii CIP 102972 RepID=C9PEF6_VIBFU Length = 128 Score = 93.0 bits (230), Expect = 3e-18, Method: Composition-based stats. Identities = 34/97 (35%), Positives = 54/97 (55%) Query: 31 SKSAAETVFQQFGGGDVSGTLQDIDLIMDIPVKLTVELGRTRMTIKELLRLTQGSVVALD 90 A E +G ++ LI DIPV++TVE+ R R+ +KE++ + SV+ LD Sbjct: 27 PAMADELSSLPQDTALPTGNKSNMGLIRDIPVEVTVEVSRRRLPLKEIMSIEPASVIMLD 86 Query: 91 GLAGEPLDILINGYLIAQGEVVVVADKYGVRITDIIT 127 GEP+DI ING L G +++ KYGV++ ++ Sbjct: 87 KQEGEPVDIKINGVLFGTGNIIIQDGKYGVQVLALVN 123 >UniRef50_Q18D12 Putative flagellar motor switch protein n=3 Tax=Clostridium difficile RepID=Q18D12_CLOD6 Length = 124 Score = 93.0 bits (230), Expect = 3e-18, Method: Composition-based stats. Identities = 33/86 (38%), Positives = 62/86 (72%) Query: 50 TLQDIDLIMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQG 109 +I I+D+ ++L+V +GRT+MT++++L L +GS++ LD LA + ++ILI+ ++A G Sbjct: 38 NRNNIQRILDLKLELSVVIGRTKMTLRDILNLHKGSLIELDTLADQDVEILIDNKVLAYG 97 Query: 110 EVVVVADKYGVRITDIITPSERMRRL 135 +VVVV +GV+IT I++ + ++ L Sbjct: 98 KVVVVDLNFGVKITSIVSEEDMVKSL 123 >UniRef50_A3SFT8 Surface presentation of antigens (SPOA) protein n=2 Tax=Sulfitobacter RepID=A3SFT8_9RHOB Length = 114 Score = 92.6 bits (229), Expect = 3e-18, Method: Composition-based stats. Identities = 36/104 (34%), Positives = 57/104 (54%), Gaps = 1/104 (0%) Query: 24 SEQKSTSSKSAAETVFQQFGGGDVSGTLQDIDLIMDIPVKLTVELGRTRMTIKELLRLTQ 83 ++Q T + + +D I + + + V LGR+RM I ELL LT+ Sbjct: 4 NDQDKTQADLTDNNAQDAETKAPAGLDGKSLDAIFGVKLDVRVVLGRSRMPISELLNLTK 63 Query: 84 GSVVALDGLAGEPLDILINGYLIAQGEVV-VVADKYGVRITDII 126 GSV+ LD GEP+DI+IN ++A+G++V V D GV + +I+ Sbjct: 64 GSVIELDRRVGEPVDIMINDRMVARGDLVRVQGDSLGVALREIV 107 >UniRef50_Q6MBC5 Putative flagellar motor switch protein (= type III secretion translocase SctQ) n=1 Tax=Candidatus Protochlamydia amoebophila UWE25 RepID=Q6MBC5_PARUW Length = 445 Score = 92.2 bits (228), Expect = 4e-18, Method: Composition-based stats. Identities = 33/115 (28%), Positives = 66/115 (57%), Gaps = 9/115 (7%) Query: 12 NGAMDDLWAEALSEQKSTSSKS-AAETVFQQFGGGDVSGTLQDIDLIMDIPVKLTVELGR 70 N +D++ E S K+ +S+S A ++ + G ++ IPV LTVE+GR Sbjct: 337 NFTLDEVTEEEQSSPKNNASQSSPASSITENTKTGLITPNQ--------IPVNLTVEVGR 388 Query: 71 TRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQGEVVVVADKYGVRITDI 125 +M++ LL+L G+++ L+ + +D+ ING ++ +GE++ + + GVR+ ++ Sbjct: 389 IQMSMDHLLKLEPGNMLELNIKPEDGVDLTINGKIVGRGELLRIGEVLGVRVLEL 443 >UniRef50_Q1D9K8 Type III secretion system apparatus protein YscQ/HrcQ n=2 Tax=Cystobacterineae RepID=Q1D9K8_MYXXD Length = 467 Score = 92.2 bits (228), Expect = 5e-18, Method: Composition-based stats. Identities = 33/127 (25%), Positives = 67/127 (52%) Query: 1 MSDMNNPADDNNGAMDDLWAEALSEQKSTSSKSAAETVFQQFGGGDVSGTLQDIDLIMDI 60 ++D + G+ D+ AE E++ ++ + D DL+ D+ Sbjct: 341 ITDFVQGEPGHPGSADEASAEPGDEEEDFTNPELDVPPELEGAALDDVSKPDGSDLLGDV 400 Query: 61 PVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQGEVVVVADKYGV 120 P+++ VEL R +T ++++ L G V+ L+ GEP+++ +NG ++A+GE+V + + GV Sbjct: 401 PLQIAVELARVPVTAQQVVGLRTGQVLELNRGPGEPVELSVNGKVVARGELVELEGQLGV 460 Query: 121 RITDIIT 127 RI + + Sbjct: 461 RIITLAS 467 >UniRef50_A8AKJ4 Putative uncharacterized protein n=1 Tax=Citrobacter koseri ATCC BAA-895 RepID=A8AKJ4_CITK8 Length = 132 Score = 91.8 bits (227), Expect = 5e-18, Method: Composition-based stats. Identities = 40/124 (32%), Positives = 63/124 (50%), Gaps = 3/124 (2%) Query: 1 MSDMNNPADDNNGAMDDLWAEALSEQKSTSSKSAAETVFQQFGGGDVSGTLQDIDLIMDI 60 MSD+ + + D ++ E + + Q ++ + L I Sbjct: 1 MSDLQHELSQSLDLDDLNLSDMTQED---TVEGNIRLDLQPETRNTAMTDIRKMALFSRI 57 Query: 61 PVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQGEVVVVADKYGV 120 PV LT+E+ +++ EL+ + SVV LD +AGEPLDI +NG L + EVVV+ DKYG+ Sbjct: 58 PVTLTLEVASVNISLAELMSVNSDSVVELDKMAGEPLDIKVNGILFGKAEVVVLNDKYGL 117 Query: 121 RITD 124 RI + Sbjct: 118 RIIE 121 >UniRef50_B9Z4S4 Flagellar motor switch protein FliN n=1 Tax=Lutiella nitroferrum 2002 RepID=B9Z4S4_9NEIS Length = 119 Score = 91.8 bits (227), Expect = 5e-18, Method: Composition-based stats. Identities = 33/70 (47%), Positives = 50/70 (71%) Query: 56 LIMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQGEVVVVA 115 + IPV LT+E+G +++ +L+ + QGSV+ LD LAGEPLDI +NG +I + EVVV Sbjct: 40 FLRKIPVTLTLEVGSADISLADLVNIGQGSVLELDKLAGEPLDIKVNGSVIGRAEVVVAG 99 Query: 116 DKYGVRITDI 125 D YG+R+ ++ Sbjct: 100 DNYGLRVVEL 109 >UniRef50_A6CBY5 Probable flagellar motor switch protein fliN n=1 Tax=Planctomyces maris DSM 8797 RepID=A6CBY5_9PLAN Length = 295 Score = 91.8 bits (227), Expect = 6e-18, Method: Composition-based stats. Identities = 23/114 (20%), Positives = 49/114 (42%) Query: 22 ALSEQKSTSSKSAAETVFQQFGGGDVSGTLQDIDLIMDIPVKLTVELGRTRMTIKELLRL 81 S S + Q + ++ I +PV+ V+L ++ + +LL + Sbjct: 179 EADPAPQPSPSSTPQATPQMVQATPANSNRNPLNRISKLPVQAIVKLASKKIEMNQLLSI 238 Query: 82 TQGSVVALDGLAGEPLDILINGYLIAQGEVVVVADKYGVRITDIITPSERMRRL 135 GS++ D +PL++ IN + GE V + + +G++I + E ++ Sbjct: 239 CPGSLITFDKPCEDPLELYINNQVYCLGEAVKIGEHFGLKIDRVGFKEEYESKI 292 >UniRef50_C9R9Y4 Surface presentation of antigens (SPOA) protein n=1 Tax=Ammonifex degensii KC4 RepID=C9R9Y4_AMMDK Length = 114 Score = 91.1 bits (225), Expect = 9e-18, Method: Composition-based stats. Identities = 31/100 (31%), Positives = 58/100 (58%), Gaps = 2/100 (2%) Query: 33 SAAETVFQQFGGGDV--SGTLQDIDLIMDIPVKLTVELGRTRMTIKELLRLTQGSVVALD 90 ++ VF F ++L+ + +++T LG +T++ELL L +GSV+ LD Sbjct: 4 KISKVVFSPFSTEKAWEPKATTALELLHGVTLEVTALLGEATLTVQELLELREGSVIRLD 63 Query: 91 GLAGEPLDILINGYLIAQGEVVVVADKYGVRITDIITPSE 130 +AGE +D+L++G +GEV+V+ +++ VR+ + P E Sbjct: 64 RVAGEAVDLLLDGQKFGRGEVMVLNERFVVRVLQVFPPQE 103 >UniRef50_P57183 Flagellar motor switch protein fliN n=3 Tax=Buchnera aphidicola (Acyrthosiphon pisum) RepID=FLIN_BUCAI Length = 133 Score = 91.1 bits (225), Expect = 9e-18, Method: Composition-based stats. Identities = 35/69 (50%), Positives = 56/69 (81%) Query: 57 IMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQGEVVVVAD 116 I+++PV +TVELG +R+ IK+ L+ ++GS++ L+ EPL+I +NG+LIA GE+VV+ + Sbjct: 54 ILNVPVNITVELGTSRIKIKDFLKFSKGSMLILNESIKEPLNIFMNGHLIASGEIVVLEE 113 Query: 117 KYGVRITDI 125 KYG+RIT+I Sbjct: 114 KYGIRITNI 122 >UniRef50_A8EW52 Flagellar motor switch protein FliY n=1 Tax=Arcobacter butzleri RM4018 RepID=A8EW52_ARCB4 Length = 289 Score = 90.7 bits (224), Expect = 1e-17, Method: Composition-based stats. Identities = 31/113 (27%), Positives = 62/113 (54%) Query: 24 SEQKSTSSKSAAETVFQQFGGGDVSGTLQDIDLIMDIPVKLTVELGRTRMTIKELLRLTQ 83 + + + V+ T ++++L+ ++ +KL+V LG + +K++LR Sbjct: 176 EPKVQVTPSTPVSNNTGSSNNSSVTPTSKNLELLYNVKLKLSVRLGTKIVLLKDILRWDV 235 Query: 84 GSVVALDGLAGEPLDILINGYLIAQGEVVVVADKYGVRITDIITPSERMRRLS 136 G ++ L+ + EPL+ILING I +GE V+V K+G++I II ++ ++ Sbjct: 236 GEIIELEQMVNEPLEILINGVKIGEGEAVIVEGKFGLKIKRIINEDFQIDKIG 288 >UniRef50_A5KY22 Flagellar motor switch protein n=2 Tax=Vibrionales RepID=A5KY22_9GAMM Length = 127 Score = 90.7 bits (224), Expect = 1e-17, Method: Composition-based stats. Identities = 35/87 (40%), Positives = 49/87 (56%) Query: 45 GDVSGTLQDIDLIMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGY 104 G + +I L+ IPV +TVE+ R + + ELL L GSVV L+ G+P+DI ING Sbjct: 41 GADKEHVSNISLLKSIPVDITVEVARKTLILDELLNLKAGSVVMLEKHEGDPVDIKINGT 100 Query: 105 LIAQGEVVVVADKYGVRITDIITPSER 131 GE+V +YGVR+ II + Sbjct: 101 AFGTGEIVSKNGQYGVRLLSIIKKPSK 127 >UniRef50_D1R7U0 Putative type III secretion system protein n=1 Tax=Parachlamydia acanthamoebae str. Hall's coccus RepID=D1R7U0_9CHLA Length = 462 Score = 90.7 bits (224), Expect = 1e-17, Method: Composition-based stats. Identities = 26/69 (37%), Positives = 49/69 (71%) Query: 57 IMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQGEVVVVAD 116 I DIP+ +T E+GR +MT+K+L+ L G+++ L+ + +D+++NG +A+GE++ + D Sbjct: 393 IDDIPLVITAEVGRIQMTVKKLVELQPGNLLELNVHPEDGIDLVVNGKRVARGELLSIGD 452 Query: 117 KYGVRITDI 125 GVR+ +I Sbjct: 453 ALGVRVLEI 461 >UniRef50_Q058C3 Flagellar motor switch protein, C-ring protein n=1 Tax=Buchnera aphidicola str. Cc (Cinara cedri) RepID=Q058C3_BUCCC Length = 134 Score = 90.7 bits (224), Expect = 1e-17, Method: Composition-based stats. Identities = 37/89 (41%), Positives = 56/89 (62%) Query: 39 FQQFGGGDVSGTLQDIDLIMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLD 98 + + L D + IPV LT+EL + ++TI+ELL+ +GS++ L+ +PL+ Sbjct: 42 INNSYKTNANKVLFDSSALSSIPVYLTIELSKKKITIQELLQFKKGSILELEDNINKPLN 101 Query: 99 ILINGYLIAQGEVVVVADKYGVRITDIIT 127 I IN YLIA GE+VV D YGV+IT ++T Sbjct: 102 IFINNYLIAIGELVVNNDCYGVQITKLLT 130 >UniRef50_B1K3A4 Flagellar motor switch protein FliN n=1 Tax=Burkholderia cenocepacia MC0-3 RepID=B1K3A4_BURCC Length = 113 Score = 89.9 bits (222), Expect = 2e-17, Method: Composition-based stats. Identities = 31/81 (38%), Positives = 49/81 (60%) Query: 45 GDVSGTLQDIDLIMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGY 104 + + + ++ IPV+LT+E+G + + +LL GS V L+ LAGEPL I +NG Sbjct: 25 TETASPRDPMRMLRRIPVRLTLEVGEATVPLADLLSYETGSTVELNRLAGEPLVIKVNGT 84 Query: 105 LIAQGEVVVVADKYGVRITDI 125 + GEVVV + YG+RI ++ Sbjct: 85 PVGLGEVVVSGEHYGLRIIEL 105 >UniRef50_Q3ADD4 Flagellar motor switch protein FliN n=1 Tax=Carboxydothermus hydrogenoformans Z-2901 RepID=Q3ADD4_CARHZ Length = 124 Score = 89.9 bits (222), Expect = 2e-17, Method: Composition-based stats. Identities = 29/87 (33%), Positives = 48/87 (55%) Query: 37 TVFQQFGGGDVSGTLQDIDLIMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEP 96 F + L+ +I +++ +G T +T+++LL L +G V+ LD G+ Sbjct: 23 PEFSPLEPVPTGQRKLPMSLLNNIKMEIVARMGTTELTVRQLLALKEGDVLELDKSIGDL 82 Query: 97 LDILINGYLIAQGEVVVVADKYGVRIT 123 +D+ I+G A GEVVV+ + YGVRIT Sbjct: 83 IDLFIDGRRFAVGEVVVINEMYGVRIT 109 >UniRef50_Q1CTU2 Flagellar switch protein n=20 Tax=Helicobacteraceae RepID=Q1CTU2_HELPH Length = 123 Score = 89.9 bits (222), Expect = 2e-17, Method: Composition-based stats. Identities = 25/81 (30%), Positives = 50/81 (61%) Query: 57 IMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQGEVVVVAD 116 ++D+ + + ELG T++ + ++LR +GSV+ L AGE +D +NG +I +GEV+V Sbjct: 41 LLDMEIVFSAELGSTQIPLLQILRFEKGSVIDLQKPAGESVDTFVNGRVIGKGEVMVFER 100 Query: 117 KYGVRITDIITPSERMRRLSR 137 +R+ +I+ + + L++ Sbjct: 101 NLAIRLNEILDSNAIVYYLAK 121 >UniRef50_Q67MU5 Putative uncharacterized protein n=1 Tax=Symbiobacterium thermophilum RepID=Q67MU5_SYMTH Length = 227 Score = 89.1 bits (220), Expect = 4e-17, Method: Composition-based stats. Identities = 30/73 (41%), Positives = 49/73 (67%) Query: 57 IMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQGEVVVVAD 116 ++DI + L+VELG+ R+ + E+L + GSV+ LD LA EPL++ +NG EV+ + + Sbjct: 150 LLDIELTLSVELGKARLPLGEILSMGPGSVITLDRLASEPLNVKVNGLPAMTAEVIAIGE 209 Query: 117 KYGVRITDIITPS 129 KYG+RI + P+ Sbjct: 210 KYGIRIVESQLPN 222 >UniRef50_A3ZT50 Probable flagellar motor switch protein fliN n=1 Tax=Blastopirellula marina DSM 3645 RepID=A3ZT50_9PLAN Length = 309 Score = 88.0 bits (217), Expect = 9e-17, Method: Composition-based stats. Identities = 25/80 (31%), Positives = 48/80 (60%) Query: 57 IMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQGEVVVVAD 116 ++ I +++ V L +M ++E+ L GS++ D E +D+ + + IAQGE V + D Sbjct: 224 LLKIAIEVNVTLASKKMRVREITELGIGSIIQFDKSCEESIDLEVGEHRIAQGEAVKIGD 283 Query: 117 KYGVRITDIITPSERMRRLS 136 K+G+R+T+++ P ER + Sbjct: 284 KFGMRVTNVLLPEERFISIK 303 >UniRef50_Q2CGH8 Flagellar motor switch protein FliN n=3 Tax=Rhodobacteraceae RepID=Q2CGH8_9RHOB Length = 132 Score = 88.0 bits (217), Expect = 9e-17, Method: Composition-based stats. Identities = 37/128 (28%), Positives = 73/128 (57%), Gaps = 5/128 (3%) Query: 1 MSDMNNPADDNNGAMDDLWAEALSEQKSTSSKSAAETVFQQFGGGDVSGTL-QDIDLIMD 59 M D + A + L + + +TV + G V+G + I+ +++ Sbjct: 1 MPDPKTDKPSPDTAAPGQPDDTLLPELEAPEE---QTVLENMVGEQVNGDGGRSIEAMLN 57 Query: 60 IPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQGEVVVVADK-Y 118 + +++ + LGR+RM I +LL+L++GS++ LD GEP+D++++ L+A+G++V V D Sbjct: 58 VGLEVNIVLGRSRMPISQLLKLSRGSIIELDKRIGEPVDMIVSDRLVARGDLVRVGDNRV 117 Query: 119 GVRITDII 126 GV +T+I+ Sbjct: 118 GVTLTEIV 125 >UniRef50_C1ZEH8 Flagellar motor switch/type III secretory pathway protein n=1 Tax=Planctomyces limnophilus DSM 3776 RepID=C1ZEH8_PLALI Length = 396 Score = 88.0 bits (217), Expect = 9e-17, Method: Composition-based stats. Identities = 34/135 (25%), Positives = 59/135 (43%), Gaps = 1/135 (0%) Query: 1 MSDMNNPADDNNGAMDDLWAEALSEQKSTSSKSAAETVFQQFGGGDVSGTLQDIDLIMDI 60 + D + +DDL + +SAA + V+ L + + + Sbjct: 260 LPDSQTAVAPVDSPVDDLLSNYEGLAAQDPMESAAPLAQETMPQQSVTSQLM-LQRLSGV 318 Query: 61 PVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQGEVVVVADKYGV 120 V+L+V L RM + LL+L+ G++V + LDI I AQGE V + + +GV Sbjct: 319 RVQLSVRLAEKRMPLAALLQLSPGALVTFSKPCEDLLDIYIGNRQYAQGEAVKIGEHFGV 378 Query: 121 RITDIITPSERMRRL 135 ++ + P E+ L Sbjct: 379 KVNRLGPPPEKPSSL 393 >UniRef50_C3XFR2 Flagellar motor switch protein FliN n=1 Tax=Helicobacter bilis ATCC 43879 RepID=C3XFR2_9HELI Length = 128 Score = 87.6 bits (216), Expect = 1e-16, Method: Composition-based stats. Identities = 22/90 (24%), Positives = 52/90 (57%) Query: 48 SGTLQDIDLIMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIA 107 + + + ++D+ V + +LG T++ + E+L+ +GS++ L AG ++I +N ++ Sbjct: 32 EDMMANYEGLLDMKVLFSADLGTTQIPLNEILKYEKGSIIDLQKPAGASVEIFVNDRVVG 91 Query: 108 QGEVVVVADKYGVRITDIITPSERMRRLSR 137 +GEV+V +RI +I+ + + ++R Sbjct: 92 KGEVMVYERNLAIRINEILDSNAIVYYIAR 121 >UniRef50_D2LD12 Surface presentation of antigens (SPOA) protein n=1 Tax=Rhodomicrobium vannielii ATCC 17100 RepID=D2LD12_RHOVA Length = 120 Score = 87.6 bits (216), Expect = 1e-16, Method: Composition-based stats. Identities = 29/82 (35%), Positives = 54/82 (65%), Gaps = 3/82 (3%) Query: 49 GTLQDIDLIMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQ 108 G ++ ++ IP+ L V LG M I ++ +L +G+V+ LD G+ +D++ING +IA+ Sbjct: 35 GDPGSLERVLRIPLSLKVLLGSASMPIYQVTKLGRGAVIPLDRKVGDAVDVMINGRIIAK 94 Query: 109 GEVVVVAD---KYGVRITDIIT 127 GE+VV+ + ++GV +T++I Sbjct: 95 GEIVVLDEEGSRFGVTLTEMID 116 >UniRef50_A4U4R5 Surface presentation of antigens (SPOA) protein n=1 Tax=Magnetospirillum gryphiswaldense RepID=A4U4R5_9PROT Length = 90 Score = 87.2 bits (215), Expect = 2e-16, Method: Composition-based stats. Identities = 25/75 (33%), Positives = 44/75 (58%) Query: 55 DLIMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQGEVVVV 114 + + + V+ LG + I +LL+L +G+VV LD +P+D+ +N IA+ EVVVV Sbjct: 14 EAVYGVNVECIAVLGTANLPIAQLLKLGRGAVVELDRKVNDPVDLYVNRKHIARAEVVVV 73 Query: 115 ADKYGVRITDIITPS 129 D V +T+++ + Sbjct: 74 EDHLAVTVTEVLKRA 88 >UniRef50_A3WGR5 Flagellar motor switch protein n=1 Tax=Erythrobacter sp. NAP1 RepID=A3WGR5_9SPHN Length = 102 Score = 86.8 bits (214), Expect = 2e-16, Method: Composition-based stats. Identities = 29/73 (39%), Positives = 50/73 (68%) Query: 54 IDLIMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQGEVVV 113 + D+ V+L+VELGRT M +K++L + +GSVV L+ L E LD+ NG ++A+GEV+ Sbjct: 8 LKRFGDVTVRLSVELGRTEMPLKDVLAIDEGSVVPLNRLTDELLDVTANGRVVARGEVIA 67 Query: 114 VADKYGVRITDII 126 ++ +RI +++ Sbjct: 68 QDGRFALRIVELV 80 >UniRef50_Q1IR54 Surface presentation of antigens (SPOA) protein n=1 Tax=Candidatus Koribacter versatilis Ellin345 RepID=Q1IR54_ACIBL Length = 109 Score = 86.4 bits (213), Expect = 2e-16, Method: Composition-based stats. Identities = 31/105 (29%), Positives = 52/105 (49%), Gaps = 5/105 (4%) Query: 26 QKSTSSKSAAE---TVFQQFGGGDVSGTLQD--IDLIMDIPVKLTVELGRTRMTIKELLR 80 T S+ E TV Q G S ++ ++ + +T+EL R T++++L Sbjct: 4 ASGTHSRCGTEGWWTVIQNESGAKQSEDIRSEGMNSFRHLQCTVTLELPVPRFTVRQMLE 63 Query: 81 LTQGSVVALDGLAGEPLDILINGYLIAQGEVVVVADKYGVRITDI 125 L G+VV L + +NG L+A E VV ++YGVR+T++ Sbjct: 64 LRPGAVVDTCWSQATDLPLRVNGALLAWSEFEVVDNRYGVRLTEL 108 >UniRef50_O67495 Flagellar motor switch protein fliN n=1 Tax=Aquifex aeolicus RepID=FLIN_AQUAE Length = 112 Score = 86.1 bits (212), Expect = 3e-16, Method: Composition-based stats. Identities = 34/108 (31%), Positives = 59/108 (54%) Query: 19 WAEALSEQKSTSSKSAAETVFQQFGGGDVSGTLQDIDLIMDIPVKLTVELGRTRMTIKEL 78 E E + ++ E V ++ ++ I DIPV++ V +GR T+ EL Sbjct: 1 MEEQTKEIQEEKKETPQEEVREEKKEEKKVSVIELIQHFSDIPVEVEVVVGRANKTLGEL 60 Query: 79 LRLTQGSVVALDGLAGEPLDILINGYLIAQGEVVVVADKYGVRITDII 126 L + GSV+ +D + +DI +NG LIA+GE+V++ K GV+I +++ Sbjct: 61 LAMGIGSVIEIDREPKDLVDIKVNGKLIAKGELVIIDGKIGVKIKEVV 108 >UniRef50_A7K019 Type III secretion inner membrane protein YscQ n=13 Tax=Vibrionaceae RepID=A7K019_VIBSE Length = 322 Score = 86.1 bits (212), Expect = 4e-16, Method: Composition-based stats. Identities = 21/67 (31%), Positives = 41/67 (61%) Query: 60 IPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQGEVVVVADKYG 119 +PV+LT ++G +T+++L +L G V L+ +P+ + NG +I + E+V V + G Sbjct: 249 LPVELTFDIGHQTITLEQLNQLQPGYVFELNQPVSKPVTLRANGKIIGECELVNVNEHLG 308 Query: 120 VRITDII 126 VR+ ++ Sbjct: 309 VRVLELF 315 >UniRef50_Q0C2D2 Flagellar motor switch protein FliN n=1 Tax=Hyphomonas neptunium ATCC 15444 RepID=Q0C2D2_HYPNA Length = 89 Score = 85.7 bits (211), Expect = 5e-16, Method: Composition-based stats. Identities = 29/74 (39%), Positives = 52/74 (70%) Query: 56 LIMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQGEVVVVA 115 ++MD+PV++ V LG R+ ++EL+ L+ G +VAL+ EP+DI ++G L+A+G++VV Sbjct: 12 MLMDVPVRVDVVLGEARIPMEELMALSPGEIVALERQTNEPVDIYVSGRLVARGKLVVTD 71 Query: 116 DKYGVRITDIITPS 129 + GV +++II Sbjct: 72 GQLGVTLSEIIDSR 85 >UniRef50_A9DR59 Flagellar motor switch protein n=1 Tax=Oceanibulbus indolifex HEL-45 RepID=A9DR59_9RHOB Length = 154 Score = 85.3 bits (210), Expect = 5e-16, Method: Composition-based stats. Identities = 35/145 (24%), Positives = 65/145 (44%), Gaps = 20/145 (13%) Query: 2 SDMNNPADDNNGAMDDLWAEALSEQKSTSSKSAAETVFQQFGGGDV-------------- 47 D+ +P DD+ + ++ A GG D Sbjct: 4 PDLQSPKDDDTSTEGKASEATPKTTEQDQPRADAFGNTASLGGDDAGVFPQLDTEDSRNA 63 Query: 48 -----SGTLQDIDLIMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILIN 102 I+ ++++ + + + LG+ RM I LL LT+GS+V L+ G P+D++++ Sbjct: 64 LAPRPEAGGAGINAMLNVGLDVQIVLGQARMPISRLLELTRGSIVELNRKIGAPVDLMVS 123 Query: 103 GYLIAQGEVVVVA-DKYGVRITDII 126 L+A+G++V V D+ GV +T I+ Sbjct: 124 DRLVARGDLVKVGEDRLGVSLTQIV 148 >UniRef50_C6N6Z9 Putative surface presentation of antigens (SPOA) protein n=1 Tax=Legionella drancourtii LLAP12 RepID=C6N6Z9_9GAMM Length = 101 Score = 85.3 bits (210), Expect = 6e-16, Method: Composition-based stats. Identities = 29/96 (30%), Positives = 48/96 (50%) Query: 32 KSAAETVFQQFGGGDVSGTLQDIDLIMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDG 91 K T + L+ DI V+ TV +G +TI EL L G + L+ Sbjct: 6 KKVNLTEHPPQQTEGQFINKNYLGLVGDIEVQCTVRIGTLNLTIAELKELKSGQELHLEQ 65 Query: 92 LAGEPLDILINGYLIAQGEVVVVADKYGVRITDIIT 127 EP++I++N +IA+GE++ D + V+IT+I + Sbjct: 66 KTHEPVEIVLNERVIARGELMSHEDHFAVQITEIYS 101 >UniRef50_B8DI82 Flagellar motor switch protein n=20 Tax=Listeria RepID=B8DI82_LISMH Length = 515 Score = 85.3 bits (210), Expect = 6e-16, Method: Composition-based stats. Identities = 37/135 (27%), Positives = 70/135 (51%), Gaps = 11/135 (8%) Query: 1 MSDMNNPADDNNGA--MDDLWAEALSEQKST------SSKSAAETVFQQFGGGDVSGTLQ 52 M + NPA A M + A+ ++E+++T + AE V Q + TL Sbjct: 382 MYQIFNPAAAKEMAQLMLGIQAKEVAEKEATTPAEIIEPEKPAEPVHQ--AVIEEKETLS 439 Query: 53 DIDLIM-DIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQGEV 111 +++ I+ DIPV L V G ++ +++ + + V+ L EPL + +NG I +G + Sbjct: 440 EMEQILEDIPVTLEVVFGTAKVKLEKFISWCEKDVIILKESMNEPLVLALNGVTIGKGIL 499 Query: 112 VVVADKYGVRITDII 126 V V D +G+++T+++ Sbjct: 500 VRVDDHFGIQMTELV 514 >UniRef50_Q2NR65 Type III secretion apparatus SpaO n=2 Tax=Sodalis glossinidius RepID=Q2NR65_SODGM Length = 338 Score = 84.5 bits (208), Expect = 8e-16, Method: Composition-based stats. Identities = 29/106 (27%), Positives = 55/106 (51%), Gaps = 4/106 (3%) Query: 20 AEALSEQKSTSSKSAAETVFQQFGGGDVSGTLQDIDLIMDIPVKLTVELGRTRMTIKELL 79 A A+ + +AA T + GD + D + ++P+ L L R +++ E+ Sbjct: 229 AAAVHPKVRDGLAAAAPTPTGRLALGDDTAA----DPLANLPLTLEFILQRRYLSLGEIQ 284 Query: 80 RLTQGSVVALDGLAGEPLDILINGYLIAQGEVVVVADKYGVRITDI 125 + QG V+ LD + ++I NG+L+A GE+V + D+ GV + ++ Sbjct: 285 QFRQGKVLELDPEGEKHIEIRANGHLLALGELVQLEDRLGVELMEL 330 >UniRef50_Q1IR63 Flagellar motor switch FliN n=1 Tax=Candidatus Koribacter versatilis Ellin345 RepID=Q1IR63_ACIBL Length = 252 Score = 84.5 bits (208), Expect = 1e-15, Method: Composition-based stats. Identities = 25/66 (37%), Positives = 44/66 (66%) Query: 65 TVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQGEVVVVADKYGVRITD 124 T+ G+ M ++++L L GSVV LD +P+++L++G +IA+G VVVV YG+R+ + Sbjct: 186 TLRFGQREMLLQDILELQSGSVVELDREIQDPVELLLDGRVIARGSVVVVDGNYGLRVAE 245 Query: 125 IITPSE 130 + +E Sbjct: 246 VGAFAE 251 >UniRef50_Q01PQ3 Surface presentation of antigens (SPOA) protein n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q01PQ3_SOLUE Length = 82 Score = 84.5 bits (208), Expect = 1e-15, Method: Composition-based stats. Identities = 31/75 (41%), Positives = 47/75 (62%) Query: 50 TLQDIDLIMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQG 109 +++ + D+PV + VEL R MT +++L+L +G V+ AGE +DI I G L G Sbjct: 3 PKEEVAPLGDVPVDIEVELDRRIMTTRDVLQLEEGCVIGTSRSAGENIDIYIGGVLCGSG 62 Query: 110 EVVVVADKYGVRITD 124 E+VV+ + GVRITD Sbjct: 63 EIVVIENTLGVRITD 77 >UniRef50_Q8KA38 Flagellar motor switch protein fliN n=1 Tax=Buchnera aphidicola (Schizaphis graminum) RepID=FLIN_BUCAP Length = 133 Score = 84.1 bits (207), Expect = 1e-15, Method: Composition-based stats. Identities = 29/70 (41%), Positives = 47/70 (67%) Query: 56 LIMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQGEVVVVA 115 ++ DI + +TVELG++++ IK+LL ++GS++ L +PL + N LIA GE+V Sbjct: 53 ILFDIEMNITVELGKSKVKIKDLLNFSKGSMLFLQRKKEDPLKVFANNKLIALGEIVFSN 112 Query: 116 DKYGVRITDI 125 +KYG+RI I Sbjct: 113 NKYGIRIISI 122 >UniRef50_D2R2R8 Surface presentation of antigens (SPOA) protein n=1 Tax=Pirellula staleyi DSM 6068 RepID=D2R2R8_9PLAN Length = 329 Score = 84.1 bits (207), Expect = 1e-15, Method: Composition-based stats. Identities = 24/98 (24%), Positives = 45/98 (45%) Query: 35 AETVFQQFGGGDVSGTLQDIDLIMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAG 94 A + I+ I V + V L T++ +K ++ L GS++ + Sbjct: 218 ASPPPSDNVEERIYKLPPYTRSILRIEVPVRVTLATTQLPLKRIVELGPGSIIQFEKPCD 277 Query: 95 EPLDILINGYLIAQGEVVVVADKYGVRITDIITPSERM 132 L + + + +A GE V V +K+G+R+T ++ P ER Sbjct: 278 SELSLQVGEHEVAIGEAVKVGEKFGLRLTSMVMPPERF 315 >UniRef50_C5CYF0 Surface presentation of antigens (SPOA) protein n=1 Tax=Variovorax paradoxus S110 RepID=C5CYF0_VARPS Length = 151 Score = 83.7 bits (206), Expect = 2e-15, Method: Composition-based stats. Identities = 25/82 (30%), Positives = 46/82 (56%) Query: 44 GGDVSGTLQDIDLIMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILING 103 G + L+D + + I +L V +G +++ ELL + V+ LD P+D+ I G Sbjct: 60 QGGDASILKDWNPLHQIKARLQVCVGAVSLSVGELLGAKEHQVLRLDREIDHPVDLTIEG 119 Query: 104 YLIAQGEVVVVADKYGVRITDI 125 ++A+G++V V + VRIT++ Sbjct: 120 KVVARGQLVAVDGHFAVRITEL 141 >UniRef50_A4J755 Surface presentation of antigens (SPOA) protein n=1 Tax=Desulfotomaculum reducens MI-1 RepID=A4J755_DESRM Length = 128 Score = 83.7 bits (206), Expect = 2e-15, Method: Composition-based stats. Identities = 31/120 (25%), Positives = 60/120 (50%), Gaps = 1/120 (0%) Query: 12 NGAMDDLWAEALSEQKSTSSKSAAETVFQQFGGGDVSGTLQ-DIDLIMDIPVKLTVELGR 70 N +L+ L ++ + + F ++ + I D+ V ++ ELG Sbjct: 3 NEKEIELFLSELDGTQTREEAAIKKVRFPPLDSFRQERIIKTSLSHIEDVKVTISAELGE 62 Query: 71 TRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQGEVVVVADKYGVRITDIITPSE 130 + +E+L L G+V+ ++ AG+ +++ IN AQGE+++V DK+ VRI I +P + Sbjct: 63 KILKFREVLNLDVGTVLDMEKSAGDAINVYINDIKAAQGEIIIVNDKFAVRINSITSPKK 122 >UniRef50_Q5DY32 Lateral flagellar export/assembly protein (FliN-like) n=9 Tax=Enterobacteriaceae RepID=Q5DY32_ECOLX Length = 123 Score = 83.7 bits (206), Expect = 2e-15, Method: Composition-based stats. Identities = 31/73 (42%), Positives = 48/73 (65%) Query: 52 QDIDLIMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQGEV 111 + L+ IPV LT+E+ + + +LL + +V+ LD LAGEPLDI +N L+ + EV Sbjct: 40 DSMTLLKRIPVTLTLEVSSVEIMLADLLNIDDDTVIELDKLAGEPLDIKVNNILLGKAEV 99 Query: 112 VVVADKYGVRITD 124 VVV +KYG+R+ + Sbjct: 100 VVVNEKYGLRVLE 112 >UniRef50_C3KNB2 Type III secretion system translocation protein, RhcQ n=1 Tax=Rhizobium sp. NGR234 RepID=C3KNB2_RHISN Length = 351 Score = 83.7 bits (206), Expect = 2e-15, Method: Composition-based stats. Identities = 22/82 (26%), Positives = 47/82 (57%) Query: 46 DVSGTLQDIDLIMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYL 105 + +++ + D+P++L E+GR +KE+ R+ +G+V+ P+ IL NG L Sbjct: 268 QQPPSSGELEPLADLPIELVFEIGRAEFPLKEIARMGEGTVLHASPSLSSPVSILANGRL 327 Query: 106 IAQGEVVVVADKYGVRITDIIT 127 + +GE++ + + G+R+ + T Sbjct: 328 VGKGELIRIGEGLGIRVVRLST 349 >UniRef50_C7DF35 Flagellar motor switch protein FliN n=1 Tax=Thalassiobium sp. R2A62 RepID=C7DF35_9RHOB Length = 94 Score = 83.0 bits (204), Expect = 3e-15, Method: Composition-based stats. Identities = 29/82 (35%), Positives = 51/82 (62%), Gaps = 4/82 (4%) Query: 57 IMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQGEVVVVAD 116 D+P+++T+ +GRT T++ELL L + +++ LD +P+DI + LIA+GE+ + D Sbjct: 13 FSDVPIEVTISIGRTHPTVRELLDLNENAILVLDKNIQDPVDIFVGDKLIARGELQELED 72 Query: 117 ----KYGVRITDIITPSERMRR 134 + VR+T+II P R+ Sbjct: 73 TNISQLAVRLTEIIDPPSGSRK 94 >UniRef50_C1SLE0 Flagellar motor switch/type III secretory pathway protein n=1 Tax=Denitrovibrio acetiphilus DSM 12809 RepID=C1SLE0_9BACT Length = 95 Score = 83.0 bits (204), Expect = 3e-15, Method: Composition-based stats. Identities = 25/68 (36%), Positives = 46/68 (67%) Query: 63 KLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQGEVVVVADKYGVRI 122 + VELGR + ++ELL +G+++ +GEP+D L+NG +A GE++V+ +++ VRI Sbjct: 17 DIDVELGRKMVKVRELLNWEKGTILKFTKTSGEPVDFLVNGKPLALGEIMVLDERFAVRI 76 Query: 123 TDIITPSE 130 T+I+ + Sbjct: 77 TEILEKED 84 >UniRef50_UPI0001AF390C type III secretion component, putative n=2 Tax=Pseudomonas syringae group RepID=UPI0001AF390C Length = 353 Score = 82.6 bits (203), Expect = 3e-15, Method: Composition-based stats. Identities = 23/66 (34%), Positives = 43/66 (65%) Query: 57 IMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQGEVVVVAD 116 + D+P+ L +LG +T+ +L + GS++ L GLA + +D+++NG + +GE+V + D Sbjct: 282 LDDLPLTLVCQLGSVELTLAQLREMAPGSLLPLAGLAHDEVDLMVNGRRVGRGELVTIGD 341 Query: 117 KYGVRI 122 GVR+ Sbjct: 342 GLGVRL 347 >UniRef50_UPI0001C312B8 CheC, inhibitor of MCP methylation n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C312B8 Length = 301 Score = 82.6 bits (203), Expect = 4e-15, Method: Composition-based stats. Identities = 29/87 (33%), Positives = 50/87 (57%), Gaps = 1/87 (1%) Query: 40 QQFGGGDVSGTLQDIDLIMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDI 99 G GDV + D + DI V++ ELGRTR+ + + + GSV+ LD A +P+D+ Sbjct: 196 SDGGEGDVHEQVALDDALRDIRVRVWAELGRTRVPLGQAPDMPAGSVLELDRKADDPVDL 255 Query: 100 LINGYLIAQGEVVVVAD-KYGVRITDI 125 +NG A G +V+ D ++ +R+ ++ Sbjct: 256 YVNGLRFASGTLVLTDDGEWALRLAEV 282 >UniRef50_A3NFV2 Flagellar motor switch/type III secretory pathway protein n=9 Tax=Betaproteobacteria RepID=A3NFV2_BURP6 Length = 115 Score = 81.8 bits (201), Expect = 6e-15, Method: Composition-based stats. Identities = 30/71 (42%), Positives = 49/71 (69%) Query: 55 DLIMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQGEVVVV 114 L+ IPV+LT+E+G +++ EL+ + +G+V+ LD LAGEPL + +NG + EVVV Sbjct: 37 QLLAKIPVQLTLEVGTATVSLAELMNIDEGTVLELDRLAGEPLLVKVNGTTVGHAEVVVS 96 Query: 115 ADKYGVRITDI 125 + YG++I D+ Sbjct: 97 GENYGLKIIDL 107 >UniRef50_B1LY10 Surface presentation of antigens (SPOA) protein n=9 Tax=Alphaproteobacteria RepID=B1LY10_METRJ Length = 122 Score = 81.4 bits (200), Expect = 7e-15, Method: Composition-based stats. Identities = 27/73 (36%), Positives = 47/73 (64%) Query: 60 IPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQGEVVVVADKYG 119 + V LTV LGR RM + LLR+ +G+V+ L+ + ++IL N + IA+G++VV D+ Sbjct: 28 LKVDLTVVLGRARMPLHMLLRMGRGAVIELEASDSDMVEILANDHPIARGQIVVTGDRIS 87 Query: 120 VRITDIITPSERM 132 V +T++I + + Sbjct: 88 VEVTELIRKAASI 100 >UniRef50_B1TBB1 Surface presentation of antigens (SPOA) protein n=1 Tax=Burkholderia ambifaria MEX-5 RepID=B1TBB1_9BURK Length = 111 Score = 81.4 bits (200), Expect = 8e-15, Method: Composition-based stats. Identities = 32/109 (29%), Positives = 56/109 (51%), Gaps = 1/109 (0%) Query: 18 LWAEALSEQKSTSSKSAAETVFQQFGGGDVSGTLQDIDLIMDIPVKLTVELGRTRMTIKE 77 + + A SE+ E + + +DL+ D+ V L V LG + +KE Sbjct: 1 MTSHATSERSVVMRVDLPEHEPAETTEARPVAHPR-LDLVGDVIVSLDVHLGSVDLAVKE 59 Query: 78 LLRLTQGSVVALDGLAGEPLDILINGYLIAQGEVVVVADKYGVRITDII 126 L+ L GS+V LD + +D+ +N +A+ E+V V D++G+RI +I+ Sbjct: 60 LMTLQSGSLVTLDRQLDDCVDVRLNERTVARAEIVAVDDRFGIRIVEIV 108 >UniRef50_Q0ANV1 Surface presentation of antigens (SPOA) protein n=3 Tax=Alphaproteobacteria RepID=Q0ANV1_MARMM Length = 99 Score = 81.4 bits (200), Expect = 9e-15, Method: Composition-based stats. Identities = 27/71 (38%), Positives = 47/71 (66%) Query: 53 DIDLIMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQGEVV 112 D+ I + V+++V LGR++M I++ LR+ +G+V+ LD + + IL N + IA+G+VV Sbjct: 17 DVSQISSVEVEISVLLGRSKMPIQQFLRMGRGAVIPLDSGEDDQVWILANNHPIARGDVV 76 Query: 113 VVADKYGVRIT 123 + D+ V IT Sbjct: 77 IQGDRIAVSIT 87 >UniRef50_Q11M61 Surface presentation of antigens (SPOA) protein n=1 Tax=Chelativorans sp. BNC1 RepID=Q11M61_MESSB Length = 354 Score = 81.4 bits (200), Expect = 9e-15, Method: Composition-based stats. Identities = 28/105 (26%), Positives = 51/105 (48%) Query: 20 AEALSEQKSTSSKSAAETVFQQFGGGDVSGTLQDIDLIMDIPVKLTVELGRTRMTIKELL 79 A + E + + ++ + +FG G + D I D+PV+L R+T++EL Sbjct: 240 AAEIFESAESIIMNEIDSDWSEFGAGAIYDEPPLADPIEDLPVRLDFLFSTQRITLEELR 299 Query: 80 RLTQGSVVALDGLAGEPLDILINGYLIAQGEVVVVADKYGVRITD 124 L G+ + L+ P+ IL NG +G +V + D GV+++ Sbjct: 300 ALGPGATLRLNVDLTRPVTILANGAPAGRGYLVQIGDHMGVQLSH 344 >UniRef50_A6Q2N5 Flagellar motor switch protein FliN/FliY n=1 Tax=Nitratiruptor sp. SB155-2 RepID=A6Q2N5_NITSB Length = 83 Score = 80.7 bits (198), Expect = 1e-14, Method: Composition-based stats. Identities = 32/77 (41%), Positives = 50/77 (64%) Query: 49 GTLQDIDLIMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQ 108 G D L+ DI +K++V LG T+ I E+L L +G V+ L+ + +D+++N +A Sbjct: 6 GEQVDFSLLEDISLKMSVRLGSTKKMIIEILSLKEGDVIELERNTEDYIDVMLNEKKMAI 65 Query: 109 GEVVVVADKYGVRITDI 125 GE+VV+ DKYGVRI D+ Sbjct: 66 GEIVVINDKYGVRIVDL 82 >UniRef50_A9APA9 Type III secretion system apparatus protein YscQ/HrcQ n=17 Tax=Burkholderia RepID=A9APA9_BURM1 Length = 443 Score = 80.7 bits (198), Expect = 1e-14, Method: Composition-based stats. Identities = 30/111 (27%), Positives = 46/111 (41%), Gaps = 2/111 (1%) Query: 25 EQKSTSSKSAAETVFQQFGGGDVSGTLQDIDLIMD-IPVKLTVELGRTRMTIKELLRLTQ 83 E+ T G + D +D + V L EL T M + EL L Sbjct: 333 ERIREMPLEPTRTDTPPATGAAHDASPADAPRALDGLAVDLRFELPPTSMPLGELSALQP 392 Query: 84 GSVVALDGLAGEPL-DILINGYLIAQGEVVVVADKYGVRITDIITPSERMR 133 G+V+ L + + ++ NG LI G ++ V K GVR+ + P+ R R Sbjct: 393 GAVIELQQGINQSVIHLVANGMLIGTGHLIAVGQKLGVRVVTLTQPAPRER 443 >UniRef50_Q2RPI0 Surface presentation of antigens (SPOA) protein n=1 Tax=Rhodospirillum rubrum ATCC 11170 RepID=Q2RPI0_RHORT Length = 93 Score = 80.7 bits (198), Expect = 1e-14, Method: Composition-based stats. Identities = 26/73 (35%), Positives = 49/73 (67%), Gaps = 1/73 (1%) Query: 55 DLIMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQGEVVVV 114 + +PV+++V LG+ + + +LL+L +G+VV L+ EP++I N L+A+GEV++ Sbjct: 13 QAVYTVPVEISVVLGKAVLRVNQLLKLGRGAVVELEQKISEPVEIYANDILVARGEVIIT 72 Query: 115 A-DKYGVRITDII 126 DK GV +T+++ Sbjct: 73 DGDKIGVTLTELV 85 >UniRef50_UPI00016C4201 hypothetical protein GobsU_09164 n=1 Tax=Gemmata obscuriglobus UQM 2246 RepID=UPI00016C4201 Length = 117 Score = 80.7 bits (198), Expect = 2e-14, Method: Composition-based stats. Identities = 33/110 (30%), Positives = 56/110 (50%) Query: 19 WAEALSEQKSTSSKSAAETVFQQFGGGDVSGTLQDIDLIMDIPVKLTVELGRTRMTIKEL 78 AE + A + F + +G ++ + D+P+ +T LGR + I E+ Sbjct: 1 MAETTPTDPADPGVVARQAEFPRLEPRAGTGPGSTLESLRDVPITITARLGRAVLPIGEI 60 Query: 79 LRLTQGSVVALDGLAGEPLDILINGYLIAQGEVVVVADKYGVRITDIITP 128 L L GSVV L+ + P+++ + G A GEVVVV + + VRI +++ P Sbjct: 61 LTLGPGSVVELEEVISAPVELTVRGVPFAVGEVVVVGEHFAVRIKNLLPP 110 >UniRef50_Q2SH51 Flagellar motor switch/type III secretory pathway protein n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SH51_HAHCH Length = 397 Score = 80.3 bits (197), Expect = 2e-14, Method: Composition-based stats. Identities = 24/90 (26%), Positives = 41/90 (45%) Query: 40 QQFGGGDVSGTLQDIDLIMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDI 99 Q + + D+PV++ E+ R T+ ++ L G +ALD + + Sbjct: 283 QPMTHTTTPNNDAPLQPLHDLPVEVVFEVARRTATLTQIQSLAPGQTIALDKPLSGAVTL 342 Query: 100 LINGYLIAQGEVVVVADKYGVRITDIITPS 129 L+ IA+ E+V V D+ G RIT + P Sbjct: 343 LVQSQAIAEAELVQVGDQIGARITRLSLPP 372 >UniRef50_C0QPA3 Flagellar motor switch phosphatase FliY n=1 Tax=Persephonella marina EX-H1 RepID=C0QPA3_PERMH Length = 79 Score = 79.1 bits (194), Expect = 3e-14, Method: Composition-based stats. Identities = 24/74 (32%), Positives = 45/74 (60%) Query: 52 QDIDLIMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQGEV 111 DI + D+ VK+T E+GR + E++ L +G ++ LD + +++ + L A GE+ Sbjct: 5 HDISFLKDVTVKVTGEVGRVKKLFIEIITLKEGDIIKLDKHIEDYVELYVKDQLFAVGEL 64 Query: 112 VVVADKYGVRITDI 125 +V +KYG+R+ D+ Sbjct: 65 IVANEKYGIRVVDL 78 >UniRef50_Q2SEZ2 Flagellar motor switch protein n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SEZ2_HAHCH Length = 111 Score = 78.7 bits (193), Expect = 5e-14, Method: Composition-based stats. Identities = 33/101 (32%), Positives = 58/101 (57%), Gaps = 3/101 (2%) Query: 27 KSTSSKSAAETVF---QQFGGGDVSGTLQDIDLIMDIPVKLTVELGRTRMTIKELLRLTQ 83 K T+S + E V GG +DL+ ++ V L V LG +T+ EL LT Sbjct: 8 KETNSDAIVEEVILEPMNEGGAGDKLKSDPLDLVKNVKVTLDVYLGDANLTVAELTALTS 67 Query: 84 GSVVALDGLAGEPLDILINGYLIAQGEVVVVADKYGVRITD 124 SVV ++ +P+++L++G ++A+G++V V D +G++IT+ Sbjct: 68 ESVVKMNKQLNDPIELLLDGKVVARGKLVAVDDVFGIQITE 108 >UniRef50_Q48IQ1 Type III secretion component, putative n=1 Tax=Pseudomonas syringae pv. phaseolicola 1448A RepID=Q48IQ1_PSE14 Length = 301 Score = 78.7 bits (193), Expect = 5e-14, Method: Composition-based stats. Identities = 25/85 (29%), Positives = 46/85 (54%), Gaps = 1/85 (1%) Query: 39 FQQFGGGDVSGTLQDIDLIMD-IPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPL 97 F + D+D +D +P+ L +LG +T+ +L + GS++ L G + + Sbjct: 211 FNRNDSMSEMTDGSDLDTSLDELPLTLVCQLGSVELTLAQLREMAPGSLLPLAGSRHDEV 270 Query: 98 DILINGYLIAQGEVVVVADKYGVRI 122 D+++NG I +GE+V + D GVR+ Sbjct: 271 DLMVNGRRIGRGELVSIGDGLGVRL 295 >UniRef50_Q0C5L8 Putative flagellar motor switch protein FliN n=1 Tax=Hyphomonas neptunium ATCC 15444 RepID=Q0C5L8_HYPNA Length = 99 Score = 78.4 bits (192), Expect = 6e-14, Method: Composition-based stats. Identities = 33/94 (35%), Positives = 53/94 (56%), Gaps = 1/94 (1%) Query: 37 TVFQQFGGGDVSGTLQDIDLIMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEP 96 T F D SG I +PV +TV +G+ R++++E+L L SV+AL +P Sbjct: 2 TEFDGQDRRDPSGRNSYRRSIYSVPVTVTVSIGQKRLSVQEILELQPDSVIALSSKVDDP 61 Query: 97 LDILINGYLIAQGEVVVVAD-KYGVRITDIITPS 129 +D+ I+ LIA+GE+V D + V+I +II + Sbjct: 62 VDLFIDDKLIAKGELVETDDGQIAVKIVEIIEKA 95 >UniRef50_A7GNF7 CheC, inhibitor of MCP methylation n=70 Tax=Bacillales RepID=A7GNF7_BACCN Length = 554 Score = 78.0 bits (191), Expect = 8e-14, Method: Composition-based stats. Identities = 25/103 (24%), Positives = 46/103 (44%) Query: 21 EALSEQKSTSSKSAAETVFQQFGGGDVSGTLQDIDLIMDIPVKLTVELGRTRMTIKELLR 80 ++ E+ A + D ++ ++ + + G T TI+++L Sbjct: 449 ASIKEENVEEIPEPAVEPIELLEIHTGEPEYIDTSILQNVEMNVRFVFGSTVRTIEDILS 508 Query: 81 LTQGSVVALDGLAGEPLDILINGYLIAQGEVVVVADKYGVRIT 123 L + V LD EP+ I +N L+A GE+V V +GV++T Sbjct: 509 LHENDAVVLDEEVDEPIRIYVNNVLVAYGELVNVDGFFGVKVT 551 >UniRef50_A0NWB8 Putative uncharacterized protein n=3 Tax=Rhodobacteraceae RepID=A0NWB8_9RHOB Length = 88 Score = 78.0 bits (191), Expect = 8e-14, Method: Composition-based stats. Identities = 25/83 (30%), Positives = 49/83 (59%) Query: 54 IDLIMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQGEVVV 113 + +I V ++V LG M + +LLR+ +G+V+ LD E + I N L+A+G+VV+ Sbjct: 1 MTTFDEIKVDISVVLGENEMPVHQLLRMGRGAVIDLDVAEDEDVKIYANNTLVAKGQVVL 60 Query: 114 VADKYGVRITDIITPSERMRRLS 136 + ++ G+ IT+++ +R + Sbjct: 61 LGERIGISITEVLMRPPDIRPMR 83 >UniRef50_B4R925 FliN family protein n=8 Tax=Alphaproteobacteria RepID=B4R925_PHEZH Length = 108 Score = 77.2 bits (189), Expect = 1e-13, Method: Composition-based stats. Identities = 22/72 (30%), Positives = 43/72 (59%) Query: 52 QDIDLIMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQGEV 111 + + + V++ V LGR + +++LLR+ +G+V+ LD E + IL N + +A+GE+ Sbjct: 24 PSVSQVKAVNVEIQVVLGRASLPMQQLLRMGRGAVIPLDATVNEEVWILANNHPVARGEI 83 Query: 112 VVVADKYGVRIT 123 + DK + +T Sbjct: 84 QISDDKIAIAVT 95 >UniRef50_D2TZ40 Type III secretion apparatus protein YscQ,HrcQ,SpaO n=1 Tax=Arsenophonus nasoniae RepID=D2TZ40_9ENTR Length = 292 Score = 77.2 bits (189), Expect = 2e-13, Method: Composition-based stats. Identities = 24/72 (33%), Positives = 40/72 (55%) Query: 59 DIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQGEVVVVADKY 118 DIP+ L L + ++ + EL + QG V+ D A + I+ NG LIA+G ++ + D+ Sbjct: 221 DIPITLEYILQKRKIPLLELENIFQGKVLPCDLAAENNVKIVANGVLIAKGNIIWIEDRL 280 Query: 119 GVRITDIITPSE 130 GV IT + + Sbjct: 281 GVEITHLFHNEK 292 >UniRef50_A7HWV0 Surface presentation of antigens (SPOA) protein n=1 Tax=Parvibaculum lavamentivorans DS-1 RepID=A7HWV0_PARL1 Length = 78 Score = 77.2 bits (189), Expect = 2e-13, Method: Composition-based stats. Identities = 24/77 (31%), Positives = 48/77 (62%) Query: 54 IDLIMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQGEVVV 113 ++ + ++ V+L+V LG++ M I +LL++ +G+V+ L E + +L N IA+GE++V Sbjct: 1 MNSVNNVFVELSVVLGKSTMPIHQLLKMGRGAVIELGTRQDEEIWVLANNVPIARGEIIV 60 Query: 114 VADKYGVRITDIITPSE 130 ++ V IT ++ E Sbjct: 61 QGERVAVSITTVLAGGE 77 >UniRef50_A8EW59 Flagellar motor switch protein FliN n=1 Tax=Arcobacter butzleri RM4018 RepID=A8EW59_ARCB4 Length = 95 Score = 76.8 bits (188), Expect = 2e-13, Method: Composition-based stats. Identities = 25/81 (30%), Positives = 48/81 (59%) Query: 55 DLIMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQGEVVVV 114 DL++D + + V LG T +++ E L+LT+G +++L AG +I +N +I G+++V+ Sbjct: 9 DLLVDTEIVVDVMLGSTNISVGEFLKLTEGDIISLHKPAGSGGEIYVNSRIIGTGDIIVI 68 Query: 115 ADKYGVRITDIITPSERMRRL 135 +K VR+ D + +R Sbjct: 69 DEKLAVRVQDAMDSDNVVRYF 89 >UniRef50_UPI0001744A0D type III secretion system protein n=1 Tax=Verrucomicrobium spinosum DSM 4136 RepID=UPI0001744A0D Length = 342 Score = 76.4 bits (187), Expect = 3e-13, Method: Composition-based stats. Identities = 23/88 (26%), Positives = 44/88 (50%) Query: 38 VFQQFGGGDVSGTLQDIDLIMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPL 97 F + + L+ + V+LT +G T+++L L G+ + L A + + Sbjct: 252 QFIMSDPAPTPAATEPLALVDQLEVELTFLVGTHAATLEQLRSLAPGACIELPTPASQAV 311 Query: 98 DILINGYLIAQGEVVVVADKYGVRITDI 125 I NG I +GE++ + ++ GVRIT++ Sbjct: 312 TICANGRAIGKGELLDIGNRIGVRITEL 339 >UniRef50_B6WRL8 Putative uncharacterized protein n=1 Tax=Desulfovibrio piger ATCC 29098 RepID=B6WRL8_9DELT Length = 398 Score = 76.0 bits (186), Expect = 3e-13, Method: Composition-based stats. Identities = 37/125 (29%), Positives = 57/125 (45%), Gaps = 10/125 (8%) Query: 2 SDMNNPADDNNGAMDDLWAEALSEQKSTSSKSAAETVFQQFGGGDVSGTLQDIDLIMDIP 61 DM +P + AE SE + + A V Q G S T++ + + Sbjct: 263 PDMGDPGREP--------AEKGSEDGMSEERLAPTGVVQSDGAAAESATVEPAS-VGALE 313 Query: 62 VKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEP-LDILINGYLIAQGEVVVVADKYGV 120 + + E+GR + + EL L G +AL G P +DI + G L+AQG +V V GV Sbjct: 314 LPVVFEIGRLHLRLDELAALVPGHTLALGGETPSPVVDIRVAGQLLAQGRLVDVGGIPGV 373 Query: 121 RITDI 125 +IT + Sbjct: 374 QITRM 378 >UniRef50_A0RC99 Flagellar motor switch protein N n=71 Tax=Bacillus cereus group RepID=A0RC99_BACAH Length = 119 Score = 76.0 bits (186), Expect = 4e-13, Method: Composition-based stats. Identities = 23/87 (26%), Positives = 49/87 (56%) Query: 39 FQQFGGGDVSGTLQDIDLIMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLD 98 + F G + ID + DI ++L V+LG+ +T+ ++ L G V+ ++ G +D Sbjct: 13 LEDFAGKRNEASKAHIDTVSDISIELGVKLGKASITLGDVKELKVGDVLEVEKNLGHKVD 72 Query: 99 ILINGYLIAQGEVVVVADKYGVRITDI 125 + ++ + GE +V+ +K+G+ I++I Sbjct: 73 VYLSNMKVGIGEAIVMDEKFGIIISEI 99 >UniRef50_B6IT07 Flagellar motor switch protein FliN n=2 Tax=Rhodospirillum centenum RepID=B6IT07_RHOCS Length = 103 Score = 76.0 bits (186), Expect = 4e-13, Method: Composition-based stats. Identities = 26/84 (30%), Positives = 48/84 (57%) Query: 41 QFGGGDVSGTLQDIDLIMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDIL 100 Q L +I I D V+++V LG + + +++LL+L +G++V LD + DI+ Sbjct: 14 QAEPKKADSELPEISAIYDTEVEVSVVLGTSTIRVRDLLKLGRGAIVELDRKIDDLSDII 73 Query: 101 INGYLIAQGEVVVVADKYGVRITD 124 ++G ++ +GEV +V DK V + Sbjct: 74 VSGRMVGRGEVTIVEDKIAVTFRE 97 >UniRef50_C0AR55 Putative uncharacterized protein n=1 Tax=Proteus penneri ATCC 35198 RepID=C0AR55_9ENTR Length = 313 Score = 75.7 bits (185), Expect = 5e-13, Method: Composition-based stats. Identities = 28/130 (21%), Positives = 55/130 (42%), Gaps = 12/130 (9%) Query: 1 MSDMNNPADDNNGAMDDLWAEALSEQKSTSSKSAAETVFQQFGGGDVSGTLQDIDLIMDI 60 +++M P +++ + L E L + +S + V ++ I I Sbjct: 196 LNEMFYPDENDLDDLIQLQQENLDDHNDVTSPT------------LVHDNSVNLQSINSI 243 Query: 61 PVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQGEVVVVADKYGV 120 PV ++ L + I+++ L G + L A + + I +NG +A GE+V + D + V Sbjct: 244 PVTVSFLLASKTLLIEQIEALAPGDKIELPENAYQHIIIKVNGISVASGELVKIGDNFAV 303 Query: 121 RITDIITPSE 130 I + E Sbjct: 304 EIQRSFSAQE 313 >UniRef50_B8CYQ6 Flagellar motor switch protein FliM n=1 Tax=Halothermothrix orenii H 168 RepID=B8CYQ6_HALOH Length = 334 Score = 75.7 bits (185), Expect = 5e-13, Method: Composition-based stats. Identities = 31/102 (30%), Positives = 47/102 (46%), Gaps = 4/102 (3%) Query: 30 SSKSAAETVFQQFGGGDVSGTLQDIDLIMD----IPVKLTVELGRTRMTIKELLRLTQGS 85 Q F T Q I+ I P+++ E+G+T++T+ +LL L G Sbjct: 223 EPIVPQLNAQQWFSNTREERTAQHIEAIKKKLKRAPLEVIAEVGKTQLTVTDLLYLQPGD 282 Query: 86 VVALDGLAGEPLDILINGYLIAQGEVVVVADKYGVRITDIIT 127 V+ LD A E +DI I + QG V V+ITD+I+ Sbjct: 283 VIRLDKKAEEKVDIRIGKNVKFQGVAGVSNKHMAVKITDVIS 324 >UniRef50_B1FB78 Type III secretion system apparatus protein YscQ/HrcQ n=1 Tax=Burkholderia ambifaria IOP40-10 RepID=B1FB78_9BURK Length = 309 Score = 73.0 bits (178), Expect = 3e-12, Method: Composition-based stats. Identities = 22/72 (30%), Positives = 39/72 (54%), Gaps = 2/72 (2%) Query: 60 IPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQGEVVVVADKYG 119 +PVKL + +T+ ++ RL G+V+ LD A + I NG +A GE++ V ++ Sbjct: 238 LPVKLEFAFRQRELTVADVARLHPGAVLPLDAGAEHEVKIYANGRYLALGELIQVGERLA 297 Query: 120 VRI--TDIITPS 129 V I +++ P Sbjct: 298 VEIQSIELVDPK 309 >UniRef50_Q02KI5 Translocation protein in type III secretion n=5 Tax=Pseudomonas aeruginosa RepID=Q02KI5_PSEAB Length = 309 Score = 72.6 bits (177), Expect = 4e-12, Method: Composition-based stats. Identities = 23/86 (26%), Positives = 42/86 (48%) Query: 45 GDVSGTLQDIDLIMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGY 104 +D+ + +P+ ++ E+GR + + L L GS++ LD + IL N Sbjct: 223 TPSLADSEDLHELDQLPIPVSFEVGRRTLDLHTLSTLQPGSLLDLDCALDGEVRILANQR 282 Query: 105 LIAQGEVVVVADKYGVRITDIITPSE 130 + GE+V + D+ GVR+T + E Sbjct: 283 CLGIGELVRLQDRLGVRVTRLFGHDE 308 >UniRef50_Q18CW8 Flagellar motor switch protein n=5 Tax=Clostridium difficile RepID=Q18CW8_CLOD6 Length = 104 Score = 72.2 bits (176), Expect = 4e-12, Method: Composition-based stats. Identities = 24/81 (29%), Positives = 43/81 (53%) Query: 45 GDVSGTLQDIDLIMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGY 104 + +G +++ + + V + V +G TIK +L L +GS++ L+ E LDI N Sbjct: 18 EEKTGIIEENQNVFNAKVNVAVSIGNITETIKNILDLKEGSIIKLNKNVDEKLDIYANDR 77 Query: 105 LIAQGEVVVVADKYGVRITDI 125 L A GE ++ + VR++ I Sbjct: 78 LFAYGESIITNETLSVRLSKI 98 >UniRef50_A4J3G9 CheC, inhibitor of MCP methylation n=2 Tax=Desulfotomaculum RepID=A4J3G9_DESRM Length = 333 Score = 71.8 bits (175), Expect = 6e-12, Method: Composition-based stats. Identities = 31/127 (24%), Positives = 60/127 (47%), Gaps = 1/127 (0%) Query: 3 DMNNPADDNNGAMDDLWAEALSEQKSTSSKSAAETVFQQFGGGDVSGTLQDIDLIMDIPV 62 + N + A L + ++T K++ ETV Q F L ++ + IPV Sbjct: 206 QITNVDAARDQANYLLMKAGACDAENTEEKASDETVIQNFTQTKAPFDLPNLAGALAIPV 265 Query: 63 KLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQGEVVVVADKYGVRI 122 L LG+ R T +L +L +G +A+ + + + +L+ G +A GE+ A++ ++I Sbjct: 266 DLEFSLGKIRCTAGDLAKLKKGDTLAI-PFSSQQIKLLVGGIPVALGELQTHAEETKIKI 324 Query: 123 TDIITPS 129 + + S Sbjct: 325 SRLYQKS 331 >UniRef50_B0K1R9 Flagellar motor switch protein FliM n=14 Tax=Clostridia RepID=B0K1R9_THEPX Length = 332 Score = 70.6 bits (172), Expect = 1e-11, Method: Composition-based stats. Identities = 25/69 (36%), Positives = 41/69 (59%) Query: 62 VKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQGEVVVVADKYGVR 121 + LT +LG T +T+KE L G ++ LD EP+DI+I+ + +G + +KY VR Sbjct: 260 IPLTAQLGSTTITVKEFLDFEIGDIIMLDKHFKEPVDIIIDKKVKFRGIPGIKNNKYSVR 319 Query: 122 ITDIITPSE 130 IT++I + Sbjct: 320 ITEVIYKGD 328 >UniRef50_A8LMS4 Flagellar motor switch protein FliN n=5 Tax=Rhodobacteraceae RepID=A8LMS4_DINSH Length = 89 Score = 70.3 bits (171), Expect = 2e-11, Method: Composition-based stats. Identities = 24/87 (27%), Positives = 53/87 (60%), Gaps = 2/87 (2%) Query: 48 SGTLQDIDLIMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIA 107 + + + ++ +P+ L+V +G+ T++ELL L + +V+ LD +P+++ + +LIA Sbjct: 3 NPSPRPESPLVGVPIALSVSVGQAHPTVRELLALEKDAVLLLDKRIEDPVELYVGTHLIA 62 Query: 108 QGEVVVVAD--KYGVRITDIITPSERM 132 +G + AD + VR+T++I+P + Sbjct: 63 RGVLEEDADSHRLSVRLTEVISPERVV 89 >UniRef50_Q1GCD9 Flagellar motor switch protein fliN n=20 Tax=Rhodobacterales RepID=Q1GCD9_SILST Length = 98 Score = 69.9 bits (170), Expect = 2e-11, Method: Composition-based stats. Identities = 20/96 (20%), Positives = 48/96 (50%), Gaps = 4/96 (4%) Query: 41 QFGGGDVSGTLQDIDLIMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDIL 100 G + + + +PV++ V +G+ R I++L+ L + +++ LD +P+D+ Sbjct: 2 DETGELNPKAAEASNPFVSVPVEVIVSVGKARPLIRDLVNLGENAILTLDKKVEDPVDLY 61 Query: 101 INGYLIAQGEVVVVA----DKYGVRITDIITPSERM 132 + L+A+G++ + + VR+T+I + Sbjct: 62 VGDRLVARGQLEEMEGDQAGQLAVRLTEIADLQSGL 97 >UniRef50_P42713 Yop proteins translocation protein Q n=21 Tax=Yersinia RepID=YSCQ_YERPE Length = 307 Score = 69.5 bits (169), Expect = 3e-11, Method: Composition-based stats. Identities = 21/79 (26%), Positives = 40/79 (50%), Gaps = 3/79 (3%) Query: 50 TLQDIDLIMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQG 109 + + + +PV+++ E+GR + L L GS++ L + +L NG L+ G Sbjct: 226 NPEPLTDLNQLPVQVSFEVGRQILDWHTLTSLEPGSLIDLTTPVDGEVRLLANGRLLGHG 285 Query: 110 EVVVVADKYGVRI---TDI 125 +V + + GVRI T++ Sbjct: 286 RLVEIQGRLGVRIERLTEV 304 >UniRef50_B3RAD9 SctQ: non flagellar T3S system conserved protein. FliN/MopA/SpaO family n=1 Tax=Cupriavidus taiwanensis RepID=B3RAD9_CUPTR Length = 399 Score = 69.1 bits (168), Expect = 4e-11, Method: Composition-based stats. Identities = 28/123 (22%), Positives = 46/123 (37%), Gaps = 17/123 (13%) Query: 2 SDMNNPADDNNGAMDDLWAEALSEQKSTSSKSAAETVFQQFGGGDVSGTLQDIDLIMDIP 61 +D + D +NGA + A Q +A + + + Sbjct: 286 ADSTDSTDVSNGAHMEEQDPARQSQPIPHPDAAQPP----------------LSRLDQLE 329 Query: 62 VKLTVELGRTRMTIKELLRLTQGSVVALDGLA-GEPLDILINGYLIAQGEVVVVADKYGV 120 V L E+G + + EL + G V L + I+ NG I G ++ V ++ GV Sbjct: 330 VTLRFEVGDVAVPLAELRAVAPGYVFELPQPLKQSEVRIVANGNRIGTGTLIAVGNRLGV 389 Query: 121 RIT 123 RIT Sbjct: 390 RIT 392 >UniRef50_D1B6B3 Flagellar motor switch protein FliM n=1 Tax=Thermanaerovibrio acidaminovorans DSM 6589 RepID=D1B6B3_THEAS Length = 335 Score = 68.7 bits (167), Expect = 5e-11, Method: Composition-based stats. Identities = 23/103 (22%), Positives = 51/103 (49%), Gaps = 1/103 (0%) Query: 31 SKSAAETVFQQFGGGDVSGTLQDIDL-IMDIPVKLTVELGRTRMTIKELLRLTQGSVVAL 89 K +++ F G +V G + I+ + + V + +ELG T +++ ++L+L +G V+ L Sbjct: 227 DKLSSQHWFASTGRKNVEGAREIIEARLSKVAVPVALELGHTVLSLGDVLQLREGDVIRL 286 Query: 90 DGLAGEPLDILINGYLIAQGEVVVVADKYGVRITDIITPSERM 132 D +PL + + + E Y R+ ++++ E + Sbjct: 287 DAKTSDPLGLRVGNRVKFLCEAGSFNKHYAARVLEVLSSEEGL 329 >UniRef50_B3Q297 Type III secretion system translocation protein n=6 Tax=Rhizobium/Agrobacterium group RepID=B3Q297_RHIE6 Length = 339 Score = 67.2 bits (163), Expect = 1e-10, Method: Composition-based stats. Identities = 25/92 (27%), Positives = 44/92 (47%), Gaps = 6/92 (6%) Query: 34 AAETVFQQFGGGDVSGTLQDIDLIMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLA 93 +TV Q+ G + IP+KL + GR + ++ L + +G V LD Sbjct: 252 TNDTVDQELQGEPRPSPVDS------IPIKLVFDAGRLELPLRALETIGEGYVFNLDRPL 305 Query: 94 GEPLDILINGYLIAQGEVVVVADKYGVRITDI 125 + +DI+ G +I +GE++ V VR+T + Sbjct: 306 SDAVDIIAQGRIIGRGEIISVDGLSAVRVTAL 337 >UniRef50_P55719 Probable translocation protein y4yK n=5 Tax=Rhizobiales RepID=Y4YK_RHISN Length = 358 Score = 66.8 bits (162), Expect = 2e-10, Method: Composition-based stats. Identities = 21/66 (31%), Positives = 34/66 (51%) Query: 57 IMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQGEVVVVAD 116 + DI + L E GR +++ EL G V L +DI+ NG I +G++V + D Sbjct: 285 LDDIEIVLVFECGRWPISLGELRSAGDGHVFELGRPIDGLVDIVANGRCIGRGDIVRIGD 344 Query: 117 KYGVRI 122 G+R+ Sbjct: 345 DLGIRL 350 >UniRef50_Q7NUS2 Surface presentation of antigens; secretory proteins n=1 Tax=Chromobacterium violaceum RepID=Q7NUS2_CHRVO Length = 296 Score = 66.8 bits (162), Expect = 2e-10, Method: Composition-based stats. Identities = 19/85 (22%), Positives = 43/85 (50%) Query: 38 VFQQFGGGDVSGTLQDIDLIMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPL 97 + + + + + + +PV+L L ++ +T+ EL L + +V+ L A + Sbjct: 201 IMEWQNEMAAAAETRPLADLDRLPVRLEFVLQQSEVTLDELRELCRSNVLPLSADAERRV 260 Query: 98 DILINGYLIAQGEVVVVADKYGVRI 122 ++ NG L+ +GE+V + + GV + Sbjct: 261 ELRANGALLGRGELVQLDGRLGVEV 285 >UniRef50_P74860 Secretion system apparatus protein ssaQ n=37 Tax=Salmonella enterica RepID=SSAQ_SALTY Length = 322 Score = 66.4 bits (161), Expect = 3e-10, Method: Composition-based stats. Identities = 24/88 (27%), Positives = 44/88 (50%), Gaps = 1/88 (1%) Query: 36 ETVFQQFGGGDVSGTLQDIDLIMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGE 95 ET+ S ++ + IP ++ E+GR + I +L +L G V+ + G Sbjct: 227 ETLLASGSPMSKSDGTSSVE-LEQIPQQVLFEVGRASLEIGQLRQLKTGDVLPVGGCFAP 285 Query: 96 PLDILINGYLIAQGEVVVVADKYGVRIT 123 + I +N +I QGE++ +++ VRIT Sbjct: 286 EVTIRVNDRIIGQGELIACGNEFMVRIT 313 >UniRef50_UPI00019F17D0 translocation protein in type III secretion n=1 Tax=Citrobacter youngae ATCC 29220 RepID=UPI00019F17D0 Length = 250 Score = 65.3 bits (158), Expect = 5e-10, Method: Composition-based stats. Identities = 23/86 (26%), Positives = 42/86 (48%) Query: 37 TVFQQFGGGDVSGTLQDIDLIMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEP 96 + +Q + + ++ + D+ + LT E+G T +T EL L G V+ D L Sbjct: 159 SEIEQNVEDHIVQSHSPLNSLGDVRITLTFEVGCTSLTFAELASLKVGDVLTADVLLNNC 218 Query: 97 LDILINGYLIAQGEVVVVADKYGVRI 122 + + NG + A G ++++ D VRI Sbjct: 219 VKLRANGSVFASGNLLMLGDTPAVRI 244 >UniRef50_B8DI89 Flagellar motor switch protein n=17 Tax=Listeria RepID=B8DI89_LISMH Length = 100 Score = 65.3 bits (158), Expect = 7e-10, Method: Composition-based stats. Identities = 18/89 (20%), Positives = 43/89 (48%) Query: 37 TVFQQFGGGDVSGTLQDIDLIMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEP 96 ++ I + +I V L V LG+ M + ++ L+ G V+ ++ G Sbjct: 11 PEWEPKEPSQEGREKGSIRQVDNIGVNLIVRLGKKEMPVGDIAELSIGDVLEVEKKPGHK 70 Query: 97 LDILINGYLIAQGEVVVVADKYGVRITDI 125 ++I ++ + GE +++ + +G+ I++I Sbjct: 71 VEIFLDEKKVGIGEAILMDENFGIVISEI 99 >UniRef50_B2V6Q2 Surface presentation of antigens (SPOA) protein n=2 Tax=Sulfurihydrogenibium RepID=B2V6Q2_SULSY Length = 87 Score = 64.9 bits (157), Expect = 7e-10, Method: Composition-based stats. Identities = 24/81 (29%), Positives = 44/81 (54%) Query: 46 DVSGTLQDIDLIMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYL 105 +V + I LI +I + + +EL + + LL L +G ++ L+ + ++I Sbjct: 6 EVDEIYKKISLIKNINIPIVIELASLKKNFEFLLNLKEGDIIDLEKNIEDFVNIYFLNEK 65 Query: 106 IAQGEVVVVADKYGVRITDII 126 + GE+V V +KYGVR+ D+I Sbjct: 66 VGFGELVNVNEKYGVRLVDLI 86 >UniRef50_B1K4V5 Type III secretion system apparatus protein YscQ/HrcQ n=1 Tax=Burkholderia cenocepacia MC0-3 RepID=B1K4V5_BURCC Length = 364 Score = 64.5 bits (156), Expect = 1e-09, Method: Composition-based stats. Identities = 22/104 (21%), Positives = 42/104 (40%), Gaps = 5/104 (4%) Query: 28 STSSKSAAETVFQQFGGGDVSGTLQDIDLIMDIPVKLTVELGRTRMTIKELLRLTQGSVV 87 T G D + ++ + ++ E+ + + +L L G V+ Sbjct: 263 DTEPAMTDRNDHPVPGAPDAETQTS----LDELELPVSFEIETVTLPLAQLSALRPGYVI 318 Query: 88 ALDGLAGEP-LDILINGYLIAQGEVVVVADKYGVRITDIITPSE 130 L G + + +L G LI GE+V V ++ GVR+ D+ + Sbjct: 319 ELRGTLRDARIRLLAYGQLIGIGELVTVGEQLGVRVIDVFGSHD 362 Searching..................................................done Results from round 3 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_P15070 Flagellar motor switch protein fliN n=15 Tax=Pro... 166 2e-40 UniRef50_P26419 Flagellar motor switch protein fliN n=125 Tax=En... 158 3e-38 UniRef50_C6D2V9 CheC, inhibitor of MCP methylation / FliN fusion... 133 2e-30 UniRef50_C7ILI0 CheC, inhibitor of MCP methylation / FliN fusion... 132 3e-30 UniRef50_D1B6B2 Flagellar motor switch protein FliN n=1 Tax=Ther... 132 4e-30 UniRef50_A4IMA6 Flagellar motor switch protein n=8 Tax=Firmicute... 130 2e-29 UniRef50_B2S3V9 Flagellar motor switch protein n=2 Tax=Treponema... 129 2e-29 UniRef50_A5D0K1 Flagellum motor switch protein n=4 Tax=Bacteria ... 128 4e-29 UniRef50_Q2LT02 Flagellar motor switch protein n=2 Tax=Deltaprot... 128 4e-29 UniRef50_B0THB7 Flagellar motor switch protein flin, putative n=... 128 5e-29 UniRef50_A6LMJ7 CheC, inhibitor of MCP methylation n=4 Tax=Therm... 127 9e-29 UniRef50_B1YI92 CheC, inhibitor of MCP methylation / FliN fusion... 127 9e-29 UniRef50_B8FTQ8 CheC, inhibitor of MCP methylation / FliN fusion... 126 2e-28 UniRef50_D2LSG7 CheC, inhibitor of MCP methylation / FliN fusion... 125 3e-28 UniRef50_C1TKI4 Flagellar motor switch protein FliN n=1 Tax=Deth... 125 4e-28 UniRef50_P35539 Flagellar motor switch protein fliN (Fragment) n... 124 6e-28 UniRef50_Q47I10 Type III secretion system outer membrane O prote... 124 6e-28 UniRef50_C5VT98 Flagellar motor switch phosphatase FliY n=1 Tax=... 124 9e-28 UniRef50_Q0AYM4 CheC, inhibitor of MCP methylation n=5 Tax=Firmi... 124 9e-28 UniRef50_A8F896 Flagellar motor switch protein FliN n=3 Tax=Ther... 123 1e-27 UniRef50_C0R179 Flagellar motor switch protein n=2 Tax=Brachyspi... 123 2e-27 UniRef50_Q2NX05 Flagellar motor switch protein FliN n=5 Tax=Ente... 123 3e-27 UniRef50_A6TRP4 CheC, inhibitor of MCP methylation n=11 Tax=Clos... 122 3e-27 UniRef50_C9R9W6 CheC, inhibitor of MCP methylation / FliN fusion... 122 3e-27 UniRef50_B5Y7F0 Flagellar motor switch phosphatase FliY (CheY-Pp... 122 4e-27 UniRef50_Q31FQ0 Flagellar motor switch protein FliN n=5 Tax=Gamm... 121 5e-27 UniRef50_C8WWF9 CheC, inhibitor of MCP methylation / FliN fusion... 121 5e-27 UniRef50_A8U602 Flagellar motor switch protein n=5 Tax=Lactobaci... 121 6e-27 UniRef50_B8CYQ5 CheC, inhibitor of MCP methylation n=1 Tax=Halot... 121 9e-27 UniRef50_C0ZF88 Flagellar motor switch protein FliY n=1 Tax=Brev... 121 9e-27 UniRef50_P24073 Flagellar motor switch phosphatase fliY n=8 Tax=... 120 1e-26 UniRef50_A3DCN7 CheC, inhibitor of MCP methylation n=2 Tax=Clost... 120 1e-26 UniRef50_A5IJA7 CheC, inhibitor of MCP methylation n=5 Tax=Therm... 120 1e-26 UniRef50_B2A359 CheC, inhibitor of MCP methylation / FliN fusion... 120 1e-26 UniRef50_A4J737 CheC, inhibitor of MCP methylation n=1 Tax=Desul... 119 2e-26 UniRef50_Q6MI47 Flagellar motor switch protein FliN n=2 Tax=Delt... 119 3e-26 UniRef50_B0K9T5 CheC, inhibitor of MCP methylation / FliN fusion... 119 3e-26 UniRef50_C1I888 Flagellar switch protein FliY n=1 Tax=Clostridiu... 119 3e-26 UniRef50_D1C1A4 Flagellar motor switch protein FliN n=1 Tax=Spha... 118 5e-26 UniRef50_Q3SIG7 Flagellar motor switch/type III secretory pathwa... 118 5e-26 UniRef50_A6M1D2 CheC, inhibitor of MCP methylation n=24 Tax=Clos... 118 5e-26 UniRef50_Q0AEF2 Flagellar motor switch protein FliN n=12 Tax=Pro... 118 6e-26 UniRef50_C8W1I6 CheC, inhibitor of MCP methylation / FliN fusion... 118 7e-26 UniRef50_A9BEY5 CheC, inhibitor of MCP methylation / FliN fusion... 117 1e-25 UniRef50_B5YIZ3 Flagellar motor switch protein FliN n=1 Tax=Ther... 116 2e-25 UniRef50_C6BUR6 Flagellar motor switch protein FliN n=21 Tax=Pro... 116 2e-25 UniRef50_Q51466 Flagellar motor switch protein fliN n=23 Tax=Pro... 116 3e-25 UniRef50_A6W8L1 Flagellar motor switch protein FliN n=1 Tax=Kine... 116 3e-25 UniRef50_C4ZAN3 Flagellar motor switch protein n=2 Tax=Clostridi... 116 3e-25 UniRef50_B8FK37 Flagellar motor switch protein FliN n=3 Tax=Bact... 115 4e-25 UniRef50_B0MPD4 Putative uncharacterized protein n=1 Tax=Eubacte... 115 4e-25 UniRef50_A1WGY8 Flagellar motor switch protein FliN n=19 Tax=Pro... 115 4e-25 UniRef50_B9PA59 Predicted protein n=2 Tax=cellular organisms Rep... 115 5e-25 UniRef50_C4G689 Putative uncharacterized protein n=1 Tax=Abiotro... 114 1e-24 UniRef50_Q3BU42 Flagellar motor switch/type III secretory pathwa... 113 1e-24 UniRef50_C4Z5H2 Flagellar motor switch protein FliN/FliY n=3 Tax... 113 1e-24 UniRef50_C7R0I7 Flagellar motor switch protein FliN n=1 Tax=Jone... 113 2e-24 UniRef50_Q30VB8 Surface presentation of antigens (SPOA) protein ... 112 4e-24 UniRef50_B0P9X9 Putative uncharacterized protein n=1 Tax=Anaerot... 112 4e-24 UniRef50_Q6AJS8 Probable flagellar motor switch protein (FliN) n... 112 4e-24 UniRef50_A9KNE6 CheC, inhibitor of MCP methylation / FliN fusion... 111 5e-24 UniRef50_Q2RKB6 CheC, inhibitor of MCP methylation n=1 Tax=Moore... 111 9e-24 UniRef50_Q0AA08 Flagellar motor switch protein FliN n=49 Tax=cel... 111 1e-23 UniRef50_B4U6V5 Flagellar motor switch protein FliN n=1 Tax=Hydr... 110 1e-23 UniRef50_A7GZX6 Iron chelatin ABC transporter, substrate binding... 109 2e-23 UniRef50_Q1NP93 Surface presentation of antigens (SPOA) protein ... 109 2e-23 UniRef50_Q67K24 Flagellar motor switch protein n=1 Tax=Symbiobac... 109 2e-23 UniRef50_B9L5A1 Flagellar motor switch phosphatase FliY (CheY-Pp... 109 3e-23 UniRef50_C1SNF8 Flagellar motor switch protein FliN n=1 Tax=Deni... 109 3e-23 UniRef50_C2ED81 Flagellar motor switch protein FliY n=1 Tax=Lact... 108 4e-23 UniRef50_Q3ADB7 Flagellar motor switch protein n=1 Tax=Carboxydo... 108 7e-23 UniRef50_A8RWA3 Putative uncharacterized protein n=3 Tax=Clostri... 106 2e-22 UniRef50_D2R538 Flagellar motor switch protein FliN n=2 Tax=Plan... 106 2e-22 UniRef50_Q01PP4 Flagellar motor switch protein FliN n=1 Tax=Cand... 106 3e-22 UniRef50_B6BN04 Flagellar motor switch FliN n=1 Tax=Campylobacte... 106 3e-22 UniRef50_D0YPX2 Flagellar motor switch protein FliN n=2 Tax=Mobi... 106 3e-22 UniRef50_A6Q2L3 Flagellar motor switch protein FliN n=1 Tax=Nitr... 105 3e-22 UniRef50_A0LT68 Flagellar motor switch protein FliN n=1 Tax=Acid... 105 3e-22 UniRef50_Q8D3E9 FliN protein n=3 Tax=Enterobacteriaceae RepID=Q8... 105 4e-22 UniRef50_C2KZ02 Possible flagellar motor switch protein FliY n=1... 105 4e-22 UniRef50_C3XES1 Flagellar motor switch protein FliY n=1 Tax=Heli... 105 4e-22 UniRef50_C0GJF1 Flagellar motor switch protein FliN n=1 Tax=Deth... 105 5e-22 UniRef50_A1SEN5 Flagellar motor switch protein FliN n=1 Tax=Noca... 104 6e-22 UniRef50_B2V6S4 Flagellar motor switch protein FliN n=3 Tax=Sulf... 104 7e-22 UniRef50_A0LDK9 Flagellar motor switch protein FliN n=1 Tax=Magn... 104 1e-21 UniRef50_Q30SP4 Flagellar motor switch FliN n=1 Tax=Sulfurimonas... 104 1e-21 UniRef50_Q04RL4 Endoflagellar motor switch protein n=6 Tax=Lepto... 104 1e-21 UniRef50_D1BCL8 Flagellar motor switch protein FliN n=1 Tax=Sang... 103 1e-21 UniRef50_B8HEJ4 Flagellar motor switch protein FliN n=1 Tax=Arth... 103 1e-21 UniRef50_Q2RKD7 Flagellar motor switch FliN n=1 Tax=Moorella the... 103 1e-21 UniRef50_Q7ULU7 Flagellar motor switch protein fliN n=1 Tax=Rhod... 103 1e-21 UniRef50_C2BUL2 Flagellar motor switch protein FliN n=1 Tax=Mobi... 103 2e-21 UniRef50_UPI0001C312B0 flagellar motor switch protein FliN n=1 T... 103 3e-21 UniRef50_Q2RZE3 Possible flagellar motor switch FliN n=1 Tax=Sal... 102 3e-21 UniRef50_Q1Q6T3 Strong similar to flagellar motor switch protein... 102 4e-21 UniRef50_A8RWD0 Putative uncharacterized protein n=3 Tax=Clostri... 102 4e-21 UniRef50_D0MGA9 Flagellar motor switch protein FliN n=1 Tax=Rhod... 102 4e-21 UniRef50_D1B0L6 Flagellar motor switch protein FliN n=1 Tax=Sulf... 101 5e-21 UniRef50_A4A5Y8 Flagellar motor switch protein fliN n=3 Tax=uncl... 101 5e-21 UniRef50_A9HHD1 Flagellar motor switch protein FliN n=2 Tax=Rhod... 101 7e-21 UniRef50_C1F999 Putative flagellar motor switch protein FliN n=1... 101 8e-21 UniRef50_C0GJF0 CheC, inhibitor of MCP methylation / FliN fusion... 100 1e-20 UniRef50_C1ZEF0 Flagellar motor switch protein FliN n=1 Tax=Plan... 100 1e-20 UniRef50_A6DBQ2 Flagellar motor switch protein n=1 Tax=Caminibac... 100 1e-20 UniRef50_C0QPC5 Flagellar motor switch protein FliN n=2 Tax=Aqui... 100 1e-20 UniRef50_Q17WT1 Flagellar motor switch protein n=8 Tax=Campyloba... 100 2e-20 UniRef50_B9L5V0 Flagellar protein FliY n=1 Tax=Nautilia profundi... 100 2e-20 UniRef50_Q0EZ61 Flagellar protein n=1 Tax=Mariprofundus ferrooxy... 99 2e-20 UniRef50_A8UW94 Flagellar motor switch FliN n=1 Tax=Hydrogenivir... 99 2e-20 UniRef50_C1A552 Flagellar motor switch protein FliN n=1 Tax=Gemm... 100 3e-20 UniRef50_B9KJD9 Flagellar switch protein n=5 Tax=Rhodobacter sph... 100 3e-20 UniRef50_B2USQ1 Flagellar motor switch protein FliY n=14 Tax=Hel... 99 3e-20 UniRef50_Q44903 Flagellar motor switch protein fliN n=21 Tax=Spi... 99 4e-20 UniRef50_C0C1N9 Putative uncharacterized protein n=1 Tax=Clostri... 99 4e-20 UniRef50_Q1GNY9 Flagellar motor switch FliN n=2 Tax=Sphingomonad... 99 5e-20 UniRef50_Q4JMS2 Predicted flagellar motor switch protein n=3 Tax... 98 6e-20 UniRef50_A1UTV7 Flagellar motor switch protein fliY n=35 Tax=Rhi... 98 6e-20 UniRef50_A1QZ73 Flagellar motor switch protein FliN n=7 Tax=Spir... 98 6e-20 UniRef50_C6WJP8 Flagellar motor switch protein FliN n=1 Tax=Acti... 98 7e-20 UniRef50_B1LV08 Flagellar motor switch protein FliN n=1 Tax=Meth... 98 9e-20 UniRef50_D2S982 Flagellar motor switch protein FliN n=1 Tax=Geod... 98 1e-19 UniRef50_C6NYG7 Flagellar motor switch protein FliN n=1 Tax=Acid... 98 1e-19 UniRef50_Q03593 Flagellar motor switch protein fliN n=21 Tax=Alp... 97 1e-19 UniRef50_Q89AZ3 Flagellar motor switch protein fliN n=1 Tax=Buch... 97 1e-19 UniRef50_C7M222 Flagellar motor switch protein FliN n=1 Tax=Acid... 97 2e-19 UniRef50_A5V6A7 Flagellar motor switch protein FliN n=4 Tax=Sphi... 97 2e-19 UniRef50_B1I5E1 Surface presentation of antigens (SPOA) protein ... 96 2e-19 UniRef50_D0I457 Flagellar motor switch protein FliN n=2 Tax=Vibr... 96 3e-19 UniRef50_C0AR55 Putative uncharacterized protein n=1 Tax=Proteus... 96 4e-19 UniRef50_Q07SI0 Flagellar motor switch protein FliN n=7 Tax=Alph... 96 5e-19 UniRef50_Q2WA21 Flagellar motor switch/type III secretory pathwa... 95 5e-19 UniRef50_B6R821 Flagellar motor switch protein FliN n=2 Tax=Rhod... 95 6e-19 UniRef50_A4SI07 Lateral flagellar motor switch protein, lfiN n=2... 95 8e-19 UniRef50_Q1D9K8 Type III secretion system apparatus protein YscQ... 95 9e-19 UniRef50_C8W1G7 Surface presentation of antigens (SPOA) protein ... 95 9e-19 UniRef50_B9JRN7 Flagellar motor switch protein FliN n=2 Tax=Rhiz... 95 9e-19 UniRef50_D1AZW0 Surface presentation of antigens (SPOA) protein ... 94 1e-18 UniRef50_A1T0L0 Surface presentation of antigens (SPOA) protein ... 94 1e-18 UniRef50_A8EW52 Flagellar motor switch protein FliY n=1 Tax=Arco... 93 2e-18 UniRef50_A6CER1 Flagellar motor switch protein fliN n=1 Tax=Plan... 93 2e-18 UniRef50_B1ZL53 Flagellar motor switch protein FliN n=6 Tax=Rhiz... 93 2e-18 UniRef50_A7H064 Flagellar motor switch protein FliN n=8 Tax=Epsi... 93 2e-18 UniRef50_A4THZ3 Flagellar switch protein n=26 Tax=Enterobacteria... 93 2e-18 UniRef50_Q57259 Flagellar motor switch protein fliN n=2 Tax=Rhiz... 93 3e-18 UniRef50_A7K019 Type III secretion inner membrane protein YscQ n... 93 4e-18 UniRef50_B6QZA8 Flagellar motor switch protein n=1 Tax=Pseudovib... 93 4e-18 UniRef50_B8EL08 Flagellar motor switch protein FliN n=2 Tax=Beij... 92 5e-18 UniRef50_A5FYJ9 Flagellar motor switch protein FliN n=17 Tax=Alp... 92 5e-18 UniRef50_C1ZEH8 Flagellar motor switch/type III secretory pathwa... 92 5e-18 UniRef50_A6F9R7 Flagellar motor switch protein n=1 Tax=Moritella... 92 6e-18 UniRef50_A5D0I4 Flagellar motor switch/type III secretory pathwa... 92 6e-18 UniRef50_A6CBY5 Probable flagellar motor switch protein fliN n=1... 91 7e-18 UniRef50_C0GJH0 Surface presentation of antigens (SPOA) protein ... 91 7e-18 UniRef50_B6IQ95 Flagellar motor switch protein FliN n=1 Tax=Rhod... 91 7e-18 UniRef50_Q3ADD4 Flagellar motor switch protein FliN n=1 Tax=Carb... 91 8e-18 UniRef50_B6IW97 Flagellar motor switch protein FliN n=1 Tax=Rhod... 91 9e-18 UniRef50_D1R7U0 Putative type III secretion system protein n=1 T... 91 1e-17 UniRef50_A5KY22 Flagellar motor switch protein n=2 Tax=Vibrional... 91 1e-17 UniRef50_Q0G104 Flagellar motor switch FliN protein:Surface pres... 91 1e-17 UniRef50_C6XFK8 Putative flagellar motor switch protein n=1 Tax=... 91 1e-17 UniRef50_P42713 Yop proteins translocation protein Q n=21 Tax=Ye... 91 1e-17 UniRef50_Q11LL6 Flagellar motor switch protein FliN n=3 Tax=Phyl... 90 2e-17 UniRef50_Q18D12 Putative flagellar motor switch protein n=3 Tax=... 90 2e-17 UniRef50_A5P6I8 Flagellar motor switch protein n=1 Tax=Erythroba... 90 2e-17 UniRef50_A1RF65 Flagellar motor switch protein FliN n=8 Tax=Shew... 90 2e-17 UniRef50_Q058C3 Flagellar motor switch protein, C-ring protein n... 90 2e-17 UniRef50_C9PEF6 Flagellar motor switch protein FliN n=1 Tax=Vibr... 90 2e-17 UniRef50_C6N6Z9 Putative surface presentation of antigens (SPOA)... 90 3e-17 UniRef50_C5JB71 Flagellar motor switch/type III secretory pathwa... 89 4e-17 UniRef50_Q30RD7 Surface presentation of antigens (SPOA) protein ... 89 4e-17 UniRef50_A3SFT8 Surface presentation of antigens (SPOA) protein ... 89 4e-17 UniRef50_A4Y0Q2 Flagellar motor switch protein FliN n=1 Tax=Pseu... 89 5e-17 UniRef50_O54245 Flagellar motor switch protein fliN n=15 Tax=Rhi... 89 5e-17 UniRef50_A8AKJ4 Putative uncharacterized protein n=1 Tax=Citroba... 89 5e-17 UniRef50_UPI0001744A0D type III secretion system protein n=1 Tax... 88 6e-17 UniRef50_C9R9Y4 Surface presentation of antigens (SPOA) protein ... 88 6e-17 UniRef50_B3RAD9 SctQ: non flagellar T3S system conserved protein... 88 7e-17 UniRef50_B1ZR34 Flagellar motor switch protein FliN n=3 Tax=Verr... 88 9e-17 UniRef50_Q6MBC5 Putative flagellar motor switch protein (= type ... 88 1e-16 UniRef50_A7K1M2 Flagellar motor switch protein FliN n=17 Tax=Vib... 87 2e-16 UniRef50_Q02KI5 Translocation protein in type III secretion n=5 ... 87 2e-16 UniRef50_Q1CTU2 Flagellar switch protein n=20 Tax=Helicobacterac... 86 3e-16 UniRef50_Q11M61 Surface presentation of antigens (SPOA) protein ... 86 4e-16 UniRef50_O67495 Flagellar motor switch protein fliN n=1 Tax=Aqui... 85 6e-16 UniRef50_UPI0001AF390C type III secretion component, putative n=... 85 6e-16 UniRef50_B1K3A4 Flagellar motor switch protein FliN n=1 Tax=Burk... 85 6e-16 UniRef50_A4J755 Surface presentation of antigens (SPOA) protein ... 85 6e-16 UniRef50_C3XFR2 Flagellar motor switch protein FliN n=1 Tax=Heli... 85 7e-16 UniRef50_P57183 Flagellar motor switch protein fliN n=3 Tax=Buch... 85 8e-16 UniRef50_Q2NR65 Type III secretion apparatus SpaO n=2 Tax=Sodali... 85 8e-16 UniRef50_Q2SH51 Flagellar motor switch/type III secretory pathwa... 84 1e-15 UniRef50_B8CYQ6 Flagellar motor switch protein FliM n=1 Tax=Halo... 84 1e-15 UniRef50_Q7UIS4 Probable flagellar motor switch protein fliN [Fr... 84 2e-15 UniRef50_A9APA9 Type III secretion system apparatus protein YscQ... 83 2e-15 UniRef50_C5CYF0 Surface presentation of antigens (SPOA) protein ... 83 2e-15 UniRef50_C3KNB2 Type III secretion system translocation protein,... 83 2e-15 UniRef50_B9Z4S4 Flagellar motor switch protein FliN n=1 Tax=Luti... 83 2e-15 UniRef50_Q2CGH8 Flagellar motor switch protein FliN n=3 Tax=Rhod... 83 2e-15 UniRef50_A3WGR5 Flagellar motor switch protein n=1 Tax=Erythroba... 83 3e-15 UniRef50_A4U4R5 Surface presentation of antigens (SPOA) protein ... 83 3e-15 UniRef50_D2R2R8 Surface presentation of antigens (SPOA) protein ... 83 4e-15 UniRef50_Q8KA38 Flagellar motor switch protein fliN n=1 Tax=Buch... 83 4e-15 UniRef50_Q67MU5 Putative uncharacterized protein n=1 Tax=Symbiob... 82 5e-15 UniRef50_C1SLE0 Flagellar motor switch/type III secretory pathwa... 82 5e-15 UniRef50_D2LD12 Surface presentation of antigens (SPOA) protein ... 82 6e-15 UniRef50_B1FB78 Type III secretion system apparatus protein YscQ... 82 7e-15 UniRef50_A9DR59 Flagellar motor switch protein n=1 Tax=Oceanibul... 81 7e-15 UniRef50_A3ZT50 Probable flagellar motor switch protein fliN n=1... 81 7e-15 UniRef50_B0K1R9 Flagellar motor switch protein FliM n=14 Tax=Clo... 81 8e-15 UniRef50_Q48IQ1 Type III secretion component, putative n=1 Tax=P... 81 8e-15 UniRef50_B2A358 Flagellar motor switch protein FliM n=1 Tax=Natr... 81 8e-15 UniRef50_B8DI82 Flagellar motor switch protein n=20 Tax=Listeria... 81 8e-15 UniRef50_Q1MP57 Putative translocation protein in type III secre... 81 8e-15 UniRef50_Q0C2D2 Flagellar motor switch protein FliN n=1 Tax=Hyph... 81 8e-15 UniRef50_D2TZ40 Type III secretion apparatus protein YscQ,HrcQ,S... 81 8e-15 UniRef50_A2S1P2 Type III secretion system protein BsaV n=40 Tax=... 81 9e-15 UniRef50_B1TBB1 Surface presentation of antigens (SPOA) protein ... 81 1e-14 UniRef50_Q67K08 Flagellar motor switch protein n=1 Tax=Symbiobac... 81 1e-14 UniRef50_B1LY10 Surface presentation of antigens (SPOA) protein ... 81 1e-14 UniRef50_B8I3P2 Flagellar motor switch protein FliM n=2 Tax=Clos... 80 2e-14 UniRef50_A7GNF7 CheC, inhibitor of MCP methylation n=70 Tax=Baci... 80 2e-14 UniRef50_Q7NUS2 Surface presentation of antigens; secretory prot... 80 2e-14 UniRef50_P74860 Secretion system apparatus protein ssaQ n=37 Tax... 80 3e-14 UniRef50_Q01PQ3 Surface presentation of antigens (SPOA) protein ... 80 3e-14 UniRef50_D1B6B3 Flagellar motor switch protein FliM n=1 Tax=Ther... 80 3e-14 UniRef50_UPI00016A9827 RhcQ protein n=2 Tax=Burkholderia oklahom... 80 3e-14 UniRef50_Q0C5L8 Putative flagellar motor switch protein FliN n=1... 79 4e-14 UniRef50_B2Q5J4 Putative uncharacterized protein n=1 Tax=Provide... 79 4e-14 UniRef50_UPI00016C4201 hypothetical protein GobsU_09164 n=1 Tax=... 79 4e-14 UniRef50_A6Q2N5 Flagellar motor switch protein FliN/FliY n=1 Tax... 79 4e-14 UniRef50_B1K4V5 Type III secretion system apparatus protein YscQ... 79 5e-14 UniRef50_A3NFV2 Flagellar motor switch/type III secretory pathwa... 79 5e-14 UniRef50_B6WRL8 Putative uncharacterized protein n=1 Tax=Desulfo... 79 5e-14 UniRef50_Q0ANV1 Surface presentation of antigens (SPOA) protein ... 78 6e-14 UniRef50_C6CGS2 Type III secretion system apparatus protein YscQ... 78 6e-14 UniRef50_A4XNA3 Surface presentation of antigens (SPOA) protein ... 78 6e-14 UniRef50_A7HWV0 Surface presentation of antigens (SPOA) protein ... 78 7e-14 UniRef50_A1TJB9 Type III secretion system apparatus protein YscQ... 78 8e-14 UniRef50_A0NWB8 Putative uncharacterized protein n=3 Tax=Rhodoba... 78 8e-14 UniRef50_UPI0001C312B8 CheC, inhibitor of MCP methylation n=1 Ta... 78 9e-14 UniRef50_A2S1D1 Type III secretion inner membrane protein SctQ n... 78 9e-14 UniRef50_Q56022 Surface presentation of antigens protein spaO n=... 78 1e-13 UniRef50_Q1IR63 Flagellar motor switch FliN n=1 Tax=Candidatus K... 78 1e-13 UniRef50_D2TXN7 Type III secretion component protein SctQ n=1 Ta... 78 1e-13 UniRef50_C0QPA3 Flagellar motor switch phosphatase FliY n=1 Tax=... 78 1e-13 UniRef50_B1T0N2 Type III secretion system apparatus protein YscQ... 78 1e-13 UniRef50_C7DF35 Flagellar motor switch protein FliN n=1 Tax=Thal... 78 1e-13 UniRef50_Q8GKQ6 FliM (Fragment) n=1 Tax=Fervidobacterium sp. YNP... 77 1e-13 UniRef50_Q3JLG5 SctQ n=18 Tax=pseudomallei group RepID=Q3JLG5_BURP1 77 2e-13 UniRef50_B4R925 FliN family protein n=8 Tax=Alphaproteobacteria ... 77 2e-13 Sequences not found previously or not previously below threshold: >UniRef50_P15070 Flagellar motor switch protein fliN n=15 Tax=Proteobacteria RepID=FLIN_ECOLI Length = 137 Score = 166 bits (420), Expect = 2e-40, Method: Composition-based stats. Identities = 137/137 (100%), Positives = 137/137 (100%) Query: 1 MSDMNNPADDNNGAMDDLWAEALSEQKSTSSKSAAETVFQQFGGGDVSGTLQDIDLIMDI 60 MSDMNNPADDNNGAMDDLWAEALSEQKSTSSKSAAETVFQQFGGGDVSGTLQDIDLIMDI Sbjct: 1 MSDMNNPADDNNGAMDDLWAEALSEQKSTSSKSAAETVFQQFGGGDVSGTLQDIDLIMDI 60 Query: 61 PVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQGEVVVVADKYGV 120 PVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQGEVVVVADKYGV Sbjct: 61 PVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQGEVVVVADKYGV 120 Query: 121 RITDIITPSERMRRLSR 137 RITDIITPSERMRRLSR Sbjct: 121 RITDIITPSERMRRLSR 137 >UniRef50_P26419 Flagellar motor switch protein fliN n=125 Tax=Enterobacteriaceae RepID=FLIN_SALTY Length = 137 Score = 158 bits (401), Expect = 3e-38, Method: Composition-based stats. Identities = 123/137 (89%), Positives = 133/137 (97%) Query: 1 MSDMNNPADDNNGAMDDLWAEALSEQKSTSSKSAAETVFQQFGGGDVSGTLQDIDLIMDI 60 MSDMNNP+D+N GA+DDLWA+AL+EQK+T++KSAA+ VFQQ GGGDVSG +QDIDLIMDI Sbjct: 1 MSDMNNPSDENTGALDDLWADALNEQKATTTKSAADAVFQQLGGGDVSGAMQDIDLIMDI 60 Query: 61 PVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQGEVVVVADKYGV 120 PVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQGEVVVVADKYGV Sbjct: 61 PVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQGEVVVVADKYGV 120 Query: 121 RITDIITPSERMRRLSR 137 RITDIITPSERMRRLSR Sbjct: 121 RITDIITPSERMRRLSR 137 >UniRef50_C6D2V9 CheC, inhibitor of MCP methylation / FliN fusion protein n=15 Tax=Bacteria RepID=C6D2V9_PAESJ Length = 421 Score = 133 bits (335), Expect = 2e-30, Method: Composition-based stats. Identities = 51/137 (37%), Positives = 85/137 (62%), Gaps = 3/137 (2%) Query: 2 SDMNNPADDNNGAMDDLWAEALSEQKSTSSKSA--AETVFQQFGGGD-VSGTLQDIDLIM 58 + NP + + + ++++ F F V +++L++ Sbjct: 284 NQPYNPYQQSAAFDIQMQPQGPQTYGHAANRNVNVQPVQFANFNQAPYVQTDETNLNLLL 343 Query: 59 DIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQGEVVVVADKY 118 DIP+K+TVELGRT+ IK++L L+QGS++ LD LAGEP+DIL+N LIA+GEVVV+ + + Sbjct: 344 DIPLKVTVELGRTQKQIKDILELSQGSIIELDKLAGEPVDILVNNKLIAKGEVVVIDENF 403 Query: 119 GVRITDIITPSERMRRL 135 GVR+TDI++ +R+++L Sbjct: 404 GVRVTDIVSQWDRIQKL 420 >UniRef50_C7ILI0 CheC, inhibitor of MCP methylation / FliN fusion protein n=3 Tax=Clostridiales RepID=C7ILI0_9CLOT Length = 400 Score = 132 bits (333), Expect = 3e-30, Method: Composition-based stats. Identities = 56/121 (46%), Positives = 76/121 (62%) Query: 12 NGAMDDLWAEALSEQKSTSSKSAAETVFQQFGGGDVSGTLQDIDLIMDIPVKLTVELGRT 71 Q+ S S FQ F G + ++I LIMD+P+++TVELGRT Sbjct: 280 AMPNFGFDGGYQEPQRQRSPVSVQPVQFQAFDDGLSATEKKNISLIMDLPLQVTVELGRT 339 Query: 72 RMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQGEVVVVADKYGVRITDIITPSER 131 + IK++L GSV+ LD LAGEP+DIL+NG IA+GEVVV+ + +GVRITDII PS+R Sbjct: 340 QKLIKDILEFGSGSVIELDKLAGEPVDILVNGKAIAKGEVVVIDESFGVRITDIIHPSKR 399 Query: 132 M 132 + Sbjct: 400 L 400 >UniRef50_D1B6B2 Flagellar motor switch protein FliN n=1 Tax=Thermanaerovibrio acidaminovorans DSM 6589 RepID=D1B6B2_THEAS Length = 375 Score = 132 bits (332), Expect = 4e-30, Method: Composition-based stats. Identities = 57/121 (47%), Positives = 84/121 (69%) Query: 16 DDLWAEALSEQKSTSSKSAAETVFQQFGGGDVSGTLQDIDLIMDIPVKLTVELGRTRMTI 75 D+ + S ST+ F GG +V+ + IDLI DIPV++TVELGRTR TI Sbjct: 254 DEGFYAPRSASISTAPVDVRPAEFAPLGGQEVAISASAIDLISDIPVRITVELGRTRKTI 313 Query: 76 KELLRLTQGSVVALDGLAGEPLDILINGYLIAQGEVVVVADKYGVRITDIITPSERMRRL 135 E+L ++ GSVV L+ +AGEP+D+L+NG LIA+GEVVV+ + +GVR+T+I++ +ER+R + Sbjct: 314 GEILNMSPGSVVELNRMAGEPVDVLVNGKLIARGEVVVIDENFGVRVTEIVSRAERIRSM 373 Query: 136 S 136 Sbjct: 374 G 374 >UniRef50_A4IMA6 Flagellar motor switch protein n=8 Tax=Firmicutes RepID=A4IMA6_GEOTN Length = 393 Score = 130 bits (327), Expect = 2e-29, Method: Composition-based stats. Identities = 53/147 (36%), Positives = 93/147 (63%), Gaps = 13/147 (8%) Query: 3 DMNNPADDNNGAMDDLWAEALS------------EQKSTSSKSAAETVFQQFGGGD-VSG 49 + PA A D +++ A S E++S + + F +F + Sbjct: 247 EEPQPAPAYAHASDGVFSSAASRFTNETVGGRSKEEESVAERHIQAADFAEFDDPPLAAT 306 Query: 50 TLQDIDLIMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQG 109 ++++L+ D+P+++TVELGRT+ +++E+L+L+ GS++ LD LAGEP+DI +N LIA+G Sbjct: 307 EARNLELLFDVPLQVTVELGRTKRSVQEILQLSAGSIIELDKLAGEPVDIFVNNKLIAKG 366 Query: 110 EVVVVADKYGVRITDIITPSERMRRLS 136 EVVV+ + +GVRITDI++ ++R++RL Sbjct: 367 EVVVIDENFGVRITDIVSQNDRLKRLK 393 >UniRef50_B2S3V9 Flagellar motor switch protein n=2 Tax=Treponema pallidum RepID=B2S3V9_TREPS Length = 348 Score = 129 bits (326), Expect = 2e-29, Method: Composition-based stats. Identities = 50/129 (38%), Positives = 76/129 (58%), Gaps = 2/129 (1%) Query: 4 MNNPADDNNGAMDDLWAEALSEQKSTSSKSAAETVFQQFGGGDVSGTLQDIDLIMDIPVK 63 M P + + + +S S F +I LIMD+ ++ Sbjct: 219 MQRPQAQVGNS--QMGGVNMQMGIGAASPSVQSVQFHPLQNAAGGAEQGNIGLIMDVFME 276 Query: 64 LTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQGEVVVVADKYGVRIT 123 +TVELGRTRM IK++L + +G ++ LD LAGEP+DIL+N LIA+GEVVV+ + +GVR+T Sbjct: 277 VTVELGRTRMMIKDILGMGEGHIIELDKLAGEPVDILVNHKLIAKGEVVVIDENFGVRVT 336 Query: 124 DIITPSERM 132 +I++P ER+ Sbjct: 337 EILSPGERI 345 >UniRef50_A5D0K1 Flagellum motor switch protein n=4 Tax=Bacteria RepID=A5D0K1_PELTS Length = 422 Score = 128 bits (323), Expect = 4e-29, Method: Composition-based stats. Identities = 55/129 (42%), Positives = 76/129 (58%) Query: 9 DDNNGAMDDLWAEALSEQKSTSSKSAAETVFQQFGGGDVSGTLQDIDLIMDIPVKLTVEL 68 + + L EQ+ AA + + + +DLI+DIP+K+TV L Sbjct: 294 PEPGKEAERLQGPPAWEQEIRPPAGAAARPGTEPLTAPAAIDQRRLDLILDIPLKVTVIL 353 Query: 69 GRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQGEVVVVADKYGVRITDIITP 128 GRTR IK++L LT GSVV L L EP+++L+NG L+A GEVVVV + +GVRIT II P Sbjct: 354 GRTRWPIKDILGLTPGSVVELQNLVDEPVEVLVNGVLVAFGEVVVVNENFGVRITSIIGP 413 Query: 129 SERMRRLSR 137 ER++ L R Sbjct: 414 EERLQNLRR 422 >UniRef50_Q2LT02 Flagellar motor switch protein n=2 Tax=Deltaproteobacteria RepID=Q2LT02_SYNAS Length = 163 Score = 128 bits (323), Expect = 4e-29, Method: Composition-based stats. Identities = 58/129 (44%), Positives = 85/129 (65%) Query: 8 ADDNNGAMDDLWAEALSEQKSTSSKSAAETVFQQFGGGDVSGTLQDIDLIMDIPVKLTVE 67 +DD+N +D+ E Q T + F++ G D+D I+DIP+ L+VE Sbjct: 35 SDDDNFGWEDVKEELAQSQVKTPKVEVSPADFKEIPAGPKMDPQLDLDFILDIPLTLSVE 94 Query: 68 LGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQGEVVVVADKYGVRITDIIT 127 LGR RM I ELL+L QGS++ L LAGEP+D+ +N LIA+GEVVVV +K+G+R+TDI++ Sbjct: 95 LGRCRMLISELLQLGQGSIIELVKLAGEPMDVYVNQRLIARGEVVVVNEKFGIRLTDIVS 154 Query: 128 PSERMRRLS 136 P+ER+ +L Sbjct: 155 PAERVNKLR 163 >UniRef50_B0THB7 Flagellar motor switch protein flin, putative n=5 Tax=Bacteria RepID=B0THB7_HELMI Length = 375 Score = 128 bits (322), Expect = 5e-29, Method: Composition-based stats. Identities = 50/97 (51%), Positives = 71/97 (73%) Query: 39 FQQFGGGDVSGTLQDIDLIMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLD 98 F ++ LIMD+P+++TVELG++R TI+++L L GSV+ LD LAGEP+D Sbjct: 278 FAPLQPQRSGKDTTNLGLIMDVPLQVTVELGKSRKTIRDILDLGPGSVIELDKLAGEPVD 337 Query: 99 ILINGYLIAQGEVVVVADKYGVRITDIITPSERMRRL 135 IL+NG LIA+GEVVV+ + +GVRITDI++P ER+ L Sbjct: 338 ILVNGKLIAKGEVVVIDENFGVRITDIVSPIERIGNL 374 >UniRef50_A6LMJ7 CheC, inhibitor of MCP methylation n=4 Tax=Thermotogaceae RepID=A6LMJ7_THEM4 Length = 370 Score = 127 bits (320), Expect = 9e-29, Method: Composition-based stats. Identities = 51/135 (37%), Positives = 82/135 (60%), Gaps = 4/135 (2%) Query: 6 NPADDNNGAMDDLWAEALSEQKSTSSKSAAETVFQQFGGG----DVSGTLQDIDLIMDIP 61 P +++ +SE + S + FQ F G S + I ++DIP Sbjct: 236 TPQQAPTTENENIQNVKMSENIQKNPVSVSPVQFQSFESGGIVKSTSEIPERIKALLDIP 295 Query: 62 VKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQGEVVVVADKYGVR 121 + + VELG+T++T+K+++ L+ GS++ LD L GEP+DI++NG LIA+GEVVV+ + +GVR Sbjct: 296 LNVVVELGKTKLTLKQVMELSVGSLIELDKLTGEPVDIIVNGKLIARGEVVVIDENFGVR 355 Query: 122 ITDIITPSERMRRLS 136 IT+I++P ER L Sbjct: 356 ITEIVSPQERFYTLE 370 >UniRef50_B1YI92 CheC, inhibitor of MCP methylation / FliN fusion protein n=2 Tax=Exiguobacterium RepID=B1YI92_EXIS2 Length = 376 Score = 127 bits (320), Expect = 9e-29, Method: Composition-based stats. Identities = 49/136 (36%), Positives = 76/136 (55%), Gaps = 2/136 (1%) Query: 2 SDMNNPADDNNGAMDDLWAE--ALSEQKSTSSKSAAETVFQQFGGGDVSGTLQDIDLIMD 59 + P + A ++ + F QF G +I ++ D Sbjct: 241 TSSQEPVREQPTAPQQQPEPRYEAPPEQKKEPVGVSPVQFGQFSEVQQEGPPGNIGMLYD 300 Query: 60 IPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQGEVVVVADKYG 119 +P+ +TVELGRTR +++++L LTQGS++ LD LAGEP+D+ +N LIA GEVVV+ + +G Sbjct: 301 VPLNVTVELGRTRRSVRDILELTQGSIIELDKLAGEPVDVFVNNTLIATGEVVVIEENFG 360 Query: 120 VRITDIITPSERMRRL 135 VRIT+I+ ER+R Sbjct: 361 VRITEIVNTKERLRMF 376 >UniRef50_B8FTQ8 CheC, inhibitor of MCP methylation / FliN fusion protein n=4 Tax=Bacteria RepID=B8FTQ8_DESHD Length = 417 Score = 126 bits (317), Expect = 2e-28, Method: Composition-based stats. Identities = 47/107 (43%), Positives = 72/107 (67%) Query: 28 STSSKSAAETVFQQFGGGDVSGTLQDIDLIMDIPVKLTVELGRTRMTIKELLRLTQGSVV 87 F GD ++++LI+D+P++++VELG+ + TIKE+L L GSV+ Sbjct: 306 GVPPTPVQPAQFVPLKPGDPLHGQENLELILDVPLQVSVELGKAKKTIKEILELGPGSVI 365 Query: 88 ALDGLAGEPLDILINGYLIAQGEVVVVADKYGVRITDIITPSERMRR 134 LD LAGEP+D+++NG LIA+ EVVV+ + +G+RITDI+ P ERM + Sbjct: 366 ELDRLAGEPVDMIVNGKLIAKCEVVVINETFGIRITDIVQPGERMTK 412 >UniRef50_D2LSG7 CheC, inhibitor of MCP methylation / FliN fusion protein n=1 Tax=Bacillus cellulosilyticus DSM 2522 RepID=D2LSG7_BACS4 Length = 398 Score = 125 bits (315), Expect = 3e-28, Method: Composition-based stats. Identities = 52/135 (38%), Positives = 84/135 (62%), Gaps = 2/135 (1%) Query: 2 SDMNNPADDNNGAMDDLWAEALSEQKSTSSKSAAETVFQQFGGGD-VSGTLQDIDLIMDI 60 M + + + A + + + S F F + +++D+++DI Sbjct: 265 PQM-DATNQHQSARQEPQFVSNGSRLPDRSAEVQPAAFSNFETPQLGNNEAKNLDMLLDI 323 Query: 61 PVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQGEVVVVADKYGV 120 P+++TVELGRT+ +IK++L LTQGS++ LD LAGEP+DIL+N LIA+GEVVV+ + +GV Sbjct: 324 PLEVTVELGRTKRSIKDILELTQGSIIELDKLAGEPVDILVNQRLIAKGEVVVIDENFGV 383 Query: 121 RITDIITPSERMRRL 135 R+TDI++ ER+ L Sbjct: 384 RVTDIVSKRERLNNL 398 >UniRef50_C1TKI4 Flagellar motor switch protein FliN n=1 Tax=Dethiosulfovibrio peptidovorans DSM 11002 RepID=C1TKI4_9BACT Length = 384 Score = 125 bits (315), Expect = 4e-28, Method: Composition-based stats. Identities = 49/136 (36%), Positives = 77/136 (56%), Gaps = 4/136 (2%) Query: 5 NNPADDNNGAMDDLWAEALSEQ---KSTSSKSAAETVFQQFGGGDVSGT-LQDIDLIMDI 60 PA +S+ +++ F V + +I LI DI Sbjct: 248 QRPAQQQAPRPSGGGGAGMSQPPSGEASPPVDVRPAQFSPLQPAAVDSSLPSNIGLIADI 307 Query: 61 PVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQGEVVVVADKYGV 120 PV++TVELGRTR ++ E+L GSV+ LD +AGEP+D+L+NG LIA+GEVVV+ + +GV Sbjct: 308 PVRVTVELGRTRKSVGEVLSFAPGSVIELDKMAGEPVDVLVNGKLIAKGEVVVIDENFGV 367 Query: 121 RITDIITPSERMRRLS 136 R+T+I+ E+++ + Sbjct: 368 RVTEILNVGEKIQSIG 383 >UniRef50_P35539 Flagellar motor switch protein fliN (Fragment) n=77 Tax=Proteobacteria RepID=FLIN_PECCC Length = 106 Score = 124 bits (313), Expect = 6e-28, Method: Composition-based stats. Identities = 89/106 (83%), Positives = 95/106 (89%) Query: 32 KSAAETVFQQFGGGDVSGTLQDIDLIMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDG 91 + E +F+ G D G LQDIDLI+DIPVKLTVELGRT+MTIKELLRLTQGSVVALDG Sbjct: 1 RPTTEGIFKSLDGHDPLGALQDIDLILDIPVKLTVELGRTKMTIKELLRLTQGSVVALDG 60 Query: 92 LAGEPLDILINGYLIAQGEVVVVADKYGVRITDIITPSERMRRLSR 137 LAGEPLDILINGYLIAQGEVVVV+DKYGVRITDIITPSERMRRLSR Sbjct: 61 LAGEPLDILINGYLIAQGEVVVVSDKYGVRITDIITPSERMRRLSR 106 >UniRef50_Q47I10 Type III secretion system outer membrane O protein n=57 Tax=Proteobacteria RepID=Q47I10_DECAR Length = 147 Score = 124 bits (313), Expect = 6e-28, Method: Composition-based stats. Identities = 71/139 (51%), Positives = 100/139 (71%), Gaps = 5/139 (3%) Query: 4 MNNPADDNNGAMDDLWAEALSEQKSTSSKSAAETVFQQ-----FGGGDVSGTLQDIDLIM 58 + P +D+ +D WA A+SEQ + + +A G +G + ++D+I+ Sbjct: 9 ESTPVEDDGQISEDDWAAAMSEQAISDAPAAMAAQPADIFPSFGGNAGNAGMMNELDMIL 68 Query: 59 DIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQGEVVVVADKY 118 DIPV++TVELGRT++TIK LL+L GSVV LD +AGEP+D+++NG LIAQGEVVVV DK+ Sbjct: 69 DIPVQITVELGRTKITIKNLLQLAHGSVVELDAMAGEPMDVMVNGTLIAQGEVVVVNDKF 128 Query: 119 GVRITDIITPSERMRRLSR 137 G+R+TDIITPSERMR+L+R Sbjct: 129 GIRLTDIITPSERMRKLNR 147 >UniRef50_C5VT98 Flagellar motor switch phosphatase FliY n=1 Tax=Clostridium botulinum D str. 1873 RepID=C5VT98_CLOBO Length = 394 Score = 124 bits (312), Expect = 9e-28, Method: Composition-based stats. Identities = 50/135 (37%), Positives = 85/135 (62%), Gaps = 2/135 (1%) Query: 1 MSDMNNPADDNNGAMDDLWAEALSEQKSTSSKSAAETVFQQFGGGDVSGTLQDIDLIMDI 60 ++ M N +N ++ E + KS + + F +++G Q+IDLI+D+ Sbjct: 260 INKMQNQETSSNSQVEPKPVETYT--KSQPQVNIQKASFAPLQESNINGAPQNIDLILDV 317 Query: 61 PVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQGEVVVVADKYGV 120 P++++V LG+T+ +IK++L L GS++ LD LA EP++I +NG IA GEVVVV + +GV Sbjct: 318 PLEISVVLGKTKKSIKDILALGTGSLIELDKLAEEPVEIYVNGKKIAYGEVVVVDENFGV 377 Query: 121 RITDIITPSERMRRL 135 RI +I++ ER++ L Sbjct: 378 RIVNIVSGEERVKSL 392 >UniRef50_Q0AYM4 CheC, inhibitor of MCP methylation n=5 Tax=Firmicutes RepID=Q0AYM4_SYNWW Length = 398 Score = 124 bits (311), Expect = 9e-28, Method: Composition-based stats. Identities = 51/119 (42%), Positives = 81/119 (68%) Query: 17 DLWAEALSEQKSTSSKSAAETVFQQFGGGDVSGTLQDIDLIMDIPVKLTVELGRTRMTIK 76 + ++ E + + F ++ + Q++DLIMD+P+ ++VELG+T+ TI Sbjct: 279 QAFVQSPREMSNRPQFAVQPVQFAPLQESNMLHSPQNLDLIMDVPLDVSVELGKTKKTIG 338 Query: 77 ELLRLTQGSVVALDGLAGEPLDILINGYLIAQGEVVVVADKYGVRITDIITPSERMRRL 135 E+L L QG+++ LD LAGEP+D+L+NG LIA+GEVVV+ + YG+RIT II+P +RM +L Sbjct: 339 EILELNQGAIIQLDKLAGEPVDLLVNGKLIAKGEVVVIDENYGIRITTIISPIDRMNKL 397 >UniRef50_A8F896 Flagellar motor switch protein FliN n=3 Tax=Thermotoga RepID=A8F896_THELT Length = 343 Score = 123 bits (310), Expect = 1e-27, Method: Composition-based stats. Identities = 48/110 (43%), Positives = 73/110 (66%), Gaps = 6/110 (5%) Query: 34 AAETVFQQFGGGD------VSGTLQDIDLIMDIPVKLTVELGRTRMTIKELLRLTQGSVV 87 FQ+F S ++L++D+P+K+ VELGR +MT+K++L + GS++ Sbjct: 230 VQPVQFQEFDQSQRAAVSTPSEFSDKLELLLDVPLKVVVELGRAKMTLKQVLEMNIGSLI 289 Query: 88 ALDGLAGEPLDILINGYLIAQGEVVVVADKYGVRITDIITPSERMRRLSR 137 LD L GEP+DIL+NG LIA+GEVVVV + +GVRIT+I+TP +R+ + Sbjct: 290 ELDKLTGEPVDILVNGRLIAKGEVVVVDENFGVRITEIVTPKQRIYSIRE 339 >UniRef50_C0R179 Flagellar motor switch protein n=2 Tax=Brachyspira RepID=C0R179_BRAHW Length = 360 Score = 123 bits (308), Expect = 2e-27, Method: Composition-based stats. Identities = 47/111 (42%), Positives = 68/111 (61%) Query: 27 KSTSSKSAAETVFQQFGGGDVSGTLQDIDLIMDIPVKLTVELGRTRMTIKELLRLTQGSV 86 S F +I L+MD+ + +TVELGR MTI+++L L +GS+ Sbjct: 250 DSGPQLGVQHAEFNSLMPASDVQGTGNIGLLMDVTMNMTVELGRATMTIRDILGLGEGSI 309 Query: 87 VALDGLAGEPLDILINGYLIAQGEVVVVADKYGVRITDIITPSERMRRLSR 137 + L LAGEP+D+L+NG LIA+GEVVV+ + +GVR+TDII P +R+ R Sbjct: 310 IELQKLAGEPVDLLVNGKLIAKGEVVVIDENFGVRVTDIINPMDRLTNKPR 360 >UniRef50_Q2NX05 Flagellar motor switch protein FliN n=5 Tax=Enterobacteriaceae RepID=Q2NX05_SODGM Length = 134 Score = 123 bits (308), Expect = 3e-27, Method: Composition-based stats. Identities = 70/131 (53%), Positives = 88/131 (67%), Gaps = 1/131 (0%) Query: 8 ADDNNGAMDDLWAEALSEQKSTSSKSAAETVFQQFGGGDV-SGTLQDIDLIMDIPVKLTV 66 G L T+ + + F + S +D+ LI+DIPVK+TV Sbjct: 4 TPHTPGDEAPLHETDGQSLGDTACPAPSRPEFPPASTTEGGSPLTEDLSLILDIPVKMTV 63 Query: 67 ELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQGEVVVVADKYGVRITDII 126 ELGRTRMTI+ELL L+Q +VV L+G AGEPLDILINGYLIA+GEVVV+ ++YGVRI DI+ Sbjct: 64 ELGRTRMTIRELLHLSQDAVVPLEGQAGEPLDILINGYLIARGEVVVMGEQYGVRIADIV 123 Query: 127 TPSERMRRLSR 137 TP+ERMRRLSR Sbjct: 124 TPAERMRRLSR 134 >UniRef50_A6TRP4 CheC, inhibitor of MCP methylation n=11 Tax=Clostridia RepID=A6TRP4_ALKMQ Length = 393 Score = 122 bits (307), Expect = 3e-27, Method: Composition-based stats. Identities = 47/135 (34%), Positives = 76/135 (56%) Query: 1 MSDMNNPADDNNGAMDDLWAEALSEQKSTSSKSAAETVFQQFGGGDVSGTLQDIDLIMDI 60 ++ + + D + S + FQ F G ++I LI D+ Sbjct: 259 ITQEKSNQQPHLSDHDAPVQQRQQPSLENSKINVQPVQFQSFDQQSNRGLPENIALIQDV 318 Query: 61 PVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQGEVVVVADKYGV 120 P+ +TVELGRT I E+L G+++ L+ + GEPLDIL+NG +A+GEVVV+ + YG+ Sbjct: 319 PLSVTVELGRTVKKISEVLEFGPGTIIELEKVVGEPLDILVNGQYVAKGEVVVIDENYGI 378 Query: 121 RITDIITPSERMRRL 135 RITDI+ P++R+ ++ Sbjct: 379 RITDIVAPAKRLSKI 393 >UniRef50_C9R9W6 CheC, inhibitor of MCP methylation / FliN fusion protein n=1 Tax=Ammonifex degensii KC4 RepID=C9R9W6_AMMDK Length = 360 Score = 122 bits (307), Expect = 3e-27, Method: Composition-based stats. Identities = 53/127 (41%), Positives = 80/127 (62%) Query: 11 NNGAMDDLWAEALSEQKSTSSKSAAETVFQQFGGGDVSGTLQDIDLIMDIPVKLTVELGR 70 + ++E S + ++ +A + ++LI+DIP+K++V LGR Sbjct: 230 EEEKREKPYSEKPSPAEEAAATAAPAVTPSSPAPPPLDVDRSRLELILDIPLKVSVVLGR 289 Query: 71 TRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQGEVVVVADKYGVRITDIITPSE 130 TR IKE+L L GS++ LD LA EP++IL+NG L+A+GEVVVV + +GVRIT I+TP E Sbjct: 290 TRRPIKEILGLGPGSILELDALADEPVEILVNGVLVARGEVVVVEENFGVRITSIVTPQE 349 Query: 131 RMRRLSR 137 R+R L+R Sbjct: 350 RLRYLAR 356 >UniRef50_B5Y7F0 Flagellar motor switch phosphatase FliY (CheY-Pphosphatase fliY) (Flagellar motor switch protein fliY) n=1 Tax=Coprothermobacter proteolyticus DSM 5265 RepID=B5Y7F0_COPPD Length = 287 Score = 122 bits (306), Expect = 4e-27, Method: Composition-based stats. Identities = 53/132 (40%), Positives = 83/132 (62%), Gaps = 5/132 (3%) Query: 2 SDMNNPADDNNGAMDDLWAEALSEQKSTSSKSAAETVFQQFGGGDVSGTLQDIDLIMDIP 61 SD++ AD + ++ A + E GD+ ++++L++D+ Sbjct: 158 SDVSERADAVSSEVEKTSASVMQENDVEDVTFPQLRP-----EGDIQPLPRNLELLLDVK 212 Query: 62 VKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQGEVVVVADKYGVR 121 V ++VELGR+R++IK+LL L GS++ LD LAGEP+DIL+NG IA+GEVVV+ + +GVR Sbjct: 213 VNVSVELGRSRVSIKDLLSLGSGSIITLDKLAGEPVDILVNGKPIAKGEVVVIDESFGVR 272 Query: 122 ITDIITPSERMR 133 I DII P ER++ Sbjct: 273 ILDIIAPKERLK 284 >UniRef50_Q31FQ0 Flagellar motor switch protein FliN n=5 Tax=Gammaproteobacteria RepID=Q31FQ0_THICR Length = 153 Score = 121 bits (305), Expect = 5e-27, Method: Composition-based stats. Identities = 63/139 (45%), Positives = 91/139 (65%), Gaps = 5/139 (3%) Query: 3 DMNNPADDNNGAMDDLWAEALSEQKST----SSKSAAETVFQQFGGGD-VSGTLQDIDLI 57 D A+ ++ A DD W ALSEQ + +S F G S D+D++ Sbjct: 15 DEQAEAEGSDAAGDDPWGAALSEQAAETSSNNSDEIDAASFDALEKGRGDSSEKVDLDVL 74 Query: 58 MDIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQGEVVVVADK 117 +DIPV L +E+GR +++I+ LL TQGSV+ +D LAGEPLD+L+NG LIA GEVVV+ DK Sbjct: 75 LDIPVTLQLEIGRAKVSIRNLLSYTQGSVIEMDRLAGEPLDLLVNGTLIAHGEVVVINDK 134 Query: 118 YGVRITDIITPSERMRRLS 136 +GVR+TD+++P ER+++L Sbjct: 135 FGVRLTDVVSPQERIKKLK 153 >UniRef50_C8WWF9 CheC, inhibitor of MCP methylation / FliN fusion protein n=2 Tax=Alicyclobacillus acidocaldarius RepID=C8WWF9_ALIAD Length = 381 Score = 121 bits (305), Expect = 5e-27, Method: Composition-based stats. Identities = 48/131 (36%), Positives = 72/131 (54%), Gaps = 3/131 (2%) Query: 8 ADDNNGAMDDLWAEALSEQKSTSSKSAAETVFQQFGGGDVSGTLQ---DIDLIMDIPVKL 64 A+ DD A + S + F F G + ++ L+ D+P+ + Sbjct: 250 AEARGKNRDDAQAANRGREDEGPSVAVRRPAFPDFDEGVTPRDARPVANLSLLYDVPLNV 309 Query: 65 TVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQGEVVVVADKYGVRITD 124 TVELGR + I+E+L L GS++ LD LAGEP+DI +N IA GEVVV+ + +GVR+TD Sbjct: 310 TVELGRAKKLIREILELAPGSILELDKLAGEPVDIYVNQKKIAIGEVVVIDENFGVRVTD 369 Query: 125 IITPSERMRRL 135 I+ +R+ L Sbjct: 370 IVQADKRIDPL 380 >UniRef50_A8U602 Flagellar motor switch protein n=5 Tax=Lactobacillales RepID=A8U602_9LACT Length = 360 Score = 121 bits (304), Expect = 6e-27, Method: Composition-based stats. Identities = 45/128 (35%), Positives = 76/128 (59%) Query: 9 DDNNGAMDDLWAEALSEQKSTSSKSAAETVFQQFGGGDVSGTLQDIDLIMDIPVKLTVEL 68 A Q++ + FQ+ T +++DLIMD+P++ +V L Sbjct: 233 QAEEMTAPIAPAANQPTQETAGKIGIQKPEFQELTHAGSLKTPRNLDLIMDVPLQFSVML 292 Query: 69 GRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQGEVVVVADKYGVRITDIITP 128 G ++ TIK++L L GSVV L+ + EPL+I +NG LIA+GEVVV+ + +G+RIT+I++ Sbjct: 293 GESKKTIKDILSLGTGSVVELNKMTDEPLEIYVNGKLIAEGEVVVINESFGIRITNILSK 352 Query: 129 SERMRRLS 136 +R++ L+ Sbjct: 353 EQRIKHLN 360 >UniRef50_B8CYQ5 CheC, inhibitor of MCP methylation n=1 Tax=Halothermothrix orenii H 168 RepID=B8CYQ5_HALOH Length = 375 Score = 121 bits (303), Expect = 9e-27, Method: Composition-based stats. Identities = 50/124 (40%), Positives = 79/124 (63%) Query: 12 NGAMDDLWAEALSEQKSTSSKSAAETVFQQFGGGDVSGTLQDIDLIMDIPVKLTVELGRT 71 + + A + F F G+ + Q+++LI D+P+++TV LG+T Sbjct: 252 STTGQPVSGSANRVSAGEENVDVKRAQFPSFDNGNTAPLPQNMELIQDVPLEVTVRLGKT 311 Query: 72 RMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQGEVVVVADKYGVRITDIITPSER 131 RMTIK++L L +GS+V L+ LAGEP+D+L+NG LIA+GEVVV+ + +G R+ DII+P ER Sbjct: 312 RMTIKQILDLGEGSIVELEKLAGEPVDLLVNGKLIAKGEVVVIDENFGFRVKDIISPMER 371 Query: 132 MRRL 135 + + Sbjct: 372 LNNI 375 >UniRef50_C0ZF88 Flagellar motor switch protein FliY n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0ZF88_BREBN Length = 455 Score = 121 bits (303), Expect = 9e-27, Method: Composition-based stats. Identities = 49/110 (44%), Positives = 80/110 (72%), Gaps = 1/110 (0%) Query: 27 KSTSSKSAAETVFQQFGGGDV-SGTLQDIDLIMDIPVKLTVELGRTRMTIKELLRLTQGS 85 + + + F GG + +G +Q+++L+ DIP+++TVELGRT+ I+E+L L+ GS Sbjct: 345 PAANQANVVPAQFAPLGGAPMYTGDIQNLNLLHDIPLQVTVELGRTKKLIREILDLSAGS 404 Query: 86 VVALDGLAGEPLDILINGYLIAQGEVVVVADKYGVRITDIITPSERMRRL 135 ++ LD LAGE +DIL+N LIA+GEVVV+ + +GVR+TDII+ +R+++L Sbjct: 405 IIQLDKLAGEHVDILVNNKLIAKGEVVVIDENFGVRVTDIISQIDRVQKL 454 >UniRef50_P24073 Flagellar motor switch phosphatase fliY n=8 Tax=Bacteria RepID=FLIY_BACSU Length = 378 Score = 120 bits (302), Expect = 1e-26, Method: Composition-based stats. Identities = 47/135 (34%), Positives = 79/135 (58%), Gaps = 1/135 (0%) Query: 3 DMNNPADDNNGAMDDLWAEALSEQKSTSSKSAAETVFQQFGGGDVSGTL-QDIDLIMDIP 61 + P + K + + F F + ++D+++DIP Sbjct: 244 EPVTPEPRIEPKQQQQPPKRQGTAKKAAPVQVSPVEFSAFDPNEAVQAPIHNLDMLLDIP 303 Query: 62 VKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQGEVVVVADKYGVR 121 + +TVELGRT+ ++KE+L L+ GS++ LD LAGEP+DIL+N ++A+GEVVV+ + +GVR Sbjct: 304 LSITVELGRTKRSVKEILELSAGSIIELDKLAGEPVDILVNQRIVAKGEVVVIEENFGVR 363 Query: 122 ITDIITPSERMRRLS 136 +TDI++ +ER+ L Sbjct: 364 VTDILSQAERINNLK 378 >UniRef50_A3DCN7 CheC, inhibitor of MCP methylation n=2 Tax=Clostridium thermocellum RepID=A3DCN7_CLOTH Length = 406 Score = 120 bits (302), Expect = 1e-26, Method: Composition-based stats. Identities = 51/104 (49%), Positives = 74/104 (71%), Gaps = 1/104 (0%) Query: 30 SSKSAAETVFQQFGGG-DVSGTLQDIDLIMDIPVKLTVELGRTRMTIKELLRLTQGSVVA 88 + + F+ F G +S ++I LIMD+P+++TVELGRT IK++L GS++ Sbjct: 303 NPINVQPAQFEAFDDGSKISIDKKNIGLIMDVPLQVTVELGRTNKLIKDILEFGPGSIIE 362 Query: 89 LDGLAGEPLDILINGYLIAQGEVVVVADKYGVRITDIITPSERM 132 LD LAGEP+DIL+NG +IA GEVVV+ + +GVRITDI+ PS+R+ Sbjct: 363 LDKLAGEPVDILVNGKVIAIGEVVVIDESFGVRITDILHPSKRL 406 >UniRef50_A5IJA7 CheC, inhibitor of MCP methylation n=5 Tax=Thermotogaceae RepID=A5IJA7_THEP1 Length = 346 Score = 120 bits (302), Expect = 1e-26, Method: Composition-based stats. Identities = 47/101 (46%), Positives = 71/101 (70%) Query: 37 TVFQQFGGGDVSGTLQDIDLIMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEP 96 + ++L++DIP+++TVELGRTRMT+K +L + GS++ LD L GEP Sbjct: 246 AELKPSETRKTEVPSDKLELLLDIPLRVTVELGRTRMTLKRVLEMIPGSIIELDKLTGEP 305 Query: 97 LDILINGYLIAQGEVVVVADKYGVRITDIITPSERMRRLSR 137 +DIL+NG LIA+GEVVV+ + +GVRIT+I++P ER+ L+ Sbjct: 306 VDILVNGKLIARGEVVVIDENFGVRITEIVSPKERLELLNE 346 >UniRef50_B2A359 CheC, inhibitor of MCP methylation / FliN fusion protein n=5 Tax=Bacteria RepID=B2A359_NATTJ Length = 422 Score = 120 bits (301), Expect = 1e-26, Method: Composition-based stats. Identities = 51/129 (39%), Positives = 79/129 (61%), Gaps = 2/129 (1%) Query: 9 DDNNGAMDDLWAEALSEQKSTSSKSAAETVFQQFG--GGDVSGTLQDIDLIMDIPVKLTV 66 + + E +Q+ K F G +I+LIMD+P+++TV Sbjct: 293 EVSTQGQPTGQGEQQMKQEQQPKKDYQPVEFSPLEGHQSAAKGENSNIELIMDVPLEVTV 352 Query: 67 ELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQGEVVVVADKYGVRITDII 126 ELG+T+ I+E+L L GS++ LD +AGEP+DI +NG LIA+GEVVV+ + +G+RIT+II Sbjct: 353 ELGQTKKKIQEILELVPGSIIELDKIAGEPVDIKVNGKLIAKGEVVVIDENFGIRITEII 412 Query: 127 TPSERMRRL 135 +P ER+ +L Sbjct: 413 SPVERINKL 421 >UniRef50_A4J737 CheC, inhibitor of MCP methylation n=1 Tax=Desulfotomaculum reducens MI-1 RepID=A4J737_DESRM Length = 411 Score = 119 bits (300), Expect = 2e-26, Method: Composition-based stats. Identities = 54/127 (42%), Positives = 83/127 (65%) Query: 11 NNGAMDDLWAEALSEQKSTSSKSAAETVFQQFGGGDVSGTLQDIDLIMDIPVKLTVELGR 70 ++ D+L + E + + S +++DLI+DIP+K++V LGR Sbjct: 283 DDRESDELAGIMMQETAPPPTPAMPPQAAPIKQTSLASLEQRNLDLILDIPLKVSVILGR 342 Query: 71 TRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQGEVVVVADKYGVRITDIITPSE 130 T+ IK++L++ GSVV LD LA EP+DIL+NG L+A GEVVVV + +G+RIT+II+P E Sbjct: 343 TKRPIKDVLKIAPGSVVELDSLADEPVDILVNGTLVATGEVVVVNENFGIRITNIISPME 402 Query: 131 RMRRLSR 137 R++RLS+ Sbjct: 403 RVKRLSK 409 >UniRef50_Q6MI47 Flagellar motor switch protein FliN n=2 Tax=Deltaproteobacteria RepID=Q6MI47_BDEBA Length = 122 Score = 119 bits (298), Expect = 3e-26, Method: Composition-based stats. Identities = 53/116 (45%), Positives = 83/116 (71%) Query: 21 EALSEQKSTSSKSAAETVFQQFGGGDVSGTLQDIDLIMDIPVKLTVELGRTRMTIKELLR 80 + L++Q + AE+ ++ + +++ LI+DIP+K++VELGRT+M + ELL Sbjct: 7 DNLADQLVAEAAGMAESSGRKASSEMPTHKDRNLSLILDIPLKVSVELGRTKMPVSELLN 66 Query: 81 LTQGSVVALDGLAGEPLDILINGYLIAQGEVVVVADKYGVRITDIITPSERMRRLS 136 LTQGSV+ L LAGEP+++ +N LIA+GE VVV +K+GVR+TDII+P+ER+ +L Sbjct: 67 LTQGSVIELSKLAGEPMEVYVNDKLIARGEAVVVNEKFGVRLTDIISPAERVEQLR 122 >UniRef50_B0K9T5 CheC, inhibitor of MCP methylation / FliN fusion protein n=5 Tax=Thermoanaerobacterales RepID=B0K9T5_THEP3 Length = 375 Score = 119 bits (298), Expect = 3e-26, Method: Composition-based stats. Identities = 45/111 (40%), Positives = 73/111 (65%) Query: 26 QKSTSSKSAAETVFQQFGGGDVSGTLQDIDLIMDIPVKLTVELGRTRMTIKELLRLTQGS 85 ++ + F + +++DLI+D+P+ +TVELG+T+ IK++L L++GS Sbjct: 265 EQKVNVSPVVFQSFDEDSSSKGKKDKENLDLILDVPLTITVELGKTKKLIKDILELSEGS 324 Query: 86 VVALDGLAGEPLDILINGYLIAQGEVVVVADKYGVRITDIITPSERMRRLS 136 ++ LD LAGEP+DIL NG IA+GEVVV+ + +GVRI DI+ S+R+ + Sbjct: 325 IIELDKLAGEPVDILANGKYIAKGEVVVIDENFGVRIIDIVHQSKRISNIE 375 >UniRef50_C1I888 Flagellar switch protein FliY n=1 Tax=Clostridium sp. 7_2_43FAA RepID=C1I888_9CLOT Length = 370 Score = 119 bits (298), Expect = 3e-26, Method: Composition-based stats. Identities = 47/108 (43%), Positives = 74/108 (68%) Query: 29 TSSKSAAETVFQQFGGGDVSGTLQDIDLIMDIPVKLTVELGRTRMTIKELLRLTQGSVVA 88 F+ G V + ++IDLI+D+P++++V LGRT+ +IK++L L+ GS++ Sbjct: 263 EKPVEVHGATFEPLSQGVVGESHRNIDLILDVPLEVSVVLGRTKKSIKDILDLSTGSLIE 322 Query: 89 LDGLAGEPLDILINGYLIAQGEVVVVADKYGVRITDIITPSERMRRLS 136 LD LA EP+++LING IA GEVVVV + +GVRIT I++ ++R+R L Sbjct: 323 LDKLAEEPVEVLINGKKIAYGEVVVVDENFGVRITSIVSGADRIRTLK 370 >UniRef50_D1C1A4 Flagellar motor switch protein FliN n=1 Tax=Sphaerobacter thermophilus DSM 20745 RepID=D1C1A4_SPHTD Length = 144 Score = 118 bits (297), Expect = 5e-26, Method: Composition-based stats. Identities = 50/112 (44%), Positives = 67/112 (59%) Query: 21 EALSEQKSTSSKSAAETVFQQFGGGDVSGTLQDIDLIMDIPVKLTVELGRTRMTIKELLR 80 A EQ + S F SG Q I+ + D+ V+LT ELG RM IK +L Sbjct: 30 AAPGEQAGGEAASVHPAAFMALSQETQSGGPQSIEFLRDVEVELTAELGTARMQIKHILG 89 Query: 81 LTQGSVVALDGLAGEPLDILINGYLIAQGEVVVVADKYGVRITDIITPSERM 132 L GSVV L+ LAGEP+DI++N LIA+GEVVVV +K+ VR+ +I+ P R+ Sbjct: 90 LRPGSVVELNRLAGEPVDIMVNKTLIARGEVVVVDEKFAVRVVEIVPPERRL 141 >UniRef50_Q3SIG7 Flagellar motor switch/type III secretory pathway protein FliN n=17 Tax=Proteobacteria RepID=Q3SIG7_THIDA Length = 132 Score = 118 bits (297), Expect = 5e-26, Method: Composition-based stats. Identities = 74/130 (56%), Positives = 96/130 (73%) Query: 8 ADDNNGAMDDLWAEALSEQKSTSSKSAAETVFQQFGGGDVSGTLQDIDLIMDIPVKLTVE 67 D +D WA A++EQ + ++ A E + G +G DID I+DIPV LTVE Sbjct: 3 EDTTQTIAEDDWAAAMAEQAAPAAAPAPEIFKEFSGSASSTGLANDIDFILDIPVLLTVE 62 Query: 68 LGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQGEVVVVADKYGVRITDIIT 127 LGRT++ IK LL+L QGSVV LDGLAGEP+D+L+NG LIAQGEVVVV DK+GVR+TDIIT Sbjct: 63 LGRTKIAIKNLLQLAQGSVVELDGLAGEPMDVLVNGCLIAQGEVVVVNDKFGVRLTDIIT 122 Query: 128 PSERMRRLSR 137 P+ER+R+L++ Sbjct: 123 PAERIRKLNK 132 >UniRef50_A6M1D2 CheC, inhibitor of MCP methylation n=24 Tax=Clostridium RepID=A6M1D2_CLOB8 Length = 398 Score = 118 bits (296), Expect = 5e-26, Method: Composition-based stats. Identities = 44/107 (41%), Positives = 72/107 (67%) Query: 30 SSKSAAETVFQQFGGGDVSGTLQDIDLIMDIPVKLTVELGRTRMTIKELLRLTQGSVVAL 89 F+ + +++IDLI+D+P+ ++V LGRT+ +I+++L L GS++ L Sbjct: 292 QPVEVHAATFEPLMPQNSVPPIKNIDLILDVPLDISVVLGRTKKSIQDILNLGTGSLIEL 351 Query: 90 DGLAGEPLDILINGYLIAQGEVVVVADKYGVRITDIITPSERMRRLS 136 D LA EP++IL+NG IA GEVVVV + +G+RIT+I++ ER++RL Sbjct: 352 DKLAEEPVEILVNGKQIALGEVVVVDENFGIRITNIVSSVERIKRLK 398 >UniRef50_Q0AEF2 Flagellar motor switch protein FliN n=12 Tax=Proteobacteria RepID=Q0AEF2_NITEC Length = 157 Score = 118 bits (296), Expect = 6e-26, Method: Composition-based stats. Identities = 68/111 (61%), Positives = 90/111 (81%), Gaps = 1/111 (0%) Query: 28 STSSKSAAETVFQQFGGGDV-SGTLQDIDLIMDIPVKLTVELGRTRMTIKELLRLTQGSV 86 + +VF+QF +V + T DID+I+DIPV+LTVELGRTR+ IK LL+L QGSV Sbjct: 47 PDEDLTKPSSVFEQFSRNNVLNDTRNDIDMILDIPVQLTVELGRTRIAIKNLLQLAQGSV 106 Query: 87 VALDGLAGEPLDILINGYLIAQGEVVVVADKYGVRITDIITPSERMRRLSR 137 + LDG+AGEP+D+L+NG LIAQGEVVVV +K+G+R+TDIITPSER+R+L+R Sbjct: 107 IELDGMAGEPMDVLVNGCLIAQGEVVVVNEKFGIRLTDIITPSERIRKLNR 157 >UniRef50_C8W1I6 CheC, inhibitor of MCP methylation / FliN fusion protein n=1 Tax=Desulfotomaculum acetoxidans DSM 771 RepID=C8W1I6_DESAS Length = 572 Score = 118 bits (295), Expect = 7e-26, Method: Composition-based stats. Identities = 52/128 (40%), Positives = 78/128 (60%), Gaps = 3/128 (2%) Query: 8 ADDNNGAMDDLWAEALSEQKSTSSKSAAETVFQQFGGGDVSGTLQDIDLIMDIPVKLTVE 67 N ++L A Q T +S E ++ I+LI+D+P+ +TV Sbjct: 445 EPVTNKPPENLSPMAAGGQNQTGYQSVPE---ERVSQTPADVNWDKINLILDVPLNVTVV 501 Query: 68 LGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQGEVVVVADKYGVRITDIIT 127 LG+T+ IK++L LT GSVV L L EP+++L+NG L+A+GEVVVV + +GVRIT++IT Sbjct: 502 LGKTKKPIKDVLGLTPGSVVELGALVEEPVEVLVNGTLVARGEVVVVNENFGVRITNVIT 561 Query: 128 PSERMRRL 135 P ER++ L Sbjct: 562 PQERIQYL 569 >UniRef50_A9BEY5 CheC, inhibitor of MCP methylation / FliN fusion protein n=1 Tax=Petrotoga mobilis SJ95 RepID=A9BEY5_PETMO Length = 372 Score = 117 bits (294), Expect = 1e-25, Method: Composition-based stats. Identities = 45/132 (34%), Positives = 78/132 (59%), Gaps = 1/132 (0%) Query: 6 NPADDNNGAMDDLWAEALSEQKSTSSKSAAETVFQQFGGGDVSG-TLQDIDLIMDIPVKL 64 + N + ++K + F++ L ++L++D+P++L Sbjct: 241 DEESSKNSNTQKRSNSNVIKEKKVKVQPVEFGEFEKKEEPISPNIDLSKLELLLDVPLEL 300 Query: 65 TVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQGEVVVVADKYGVRITD 124 VELG T++ ++E+L L +GS++ L+ LAGEPLDI NG LIA+GEVVV+ + +G+R+T+ Sbjct: 301 KVELGSTKLNLREILELHEGSMIQLNKLAGEPLDIYANGRLIARGEVVVIDENFGIRVTE 360 Query: 125 IITPSERMRRLS 136 I++ ERM+ L Sbjct: 361 IVSLRERMKTLK 372 >UniRef50_B5YIZ3 Flagellar motor switch protein FliN n=1 Tax=Thermodesulfovibrio yellowstonii DSM 11347 RepID=B5YIZ3_THEYD Length = 139 Score = 116 bits (291), Expect = 2e-25, Method: Composition-based stats. Identities = 55/120 (45%), Positives = 83/120 (69%) Query: 17 DLWAEALSEQKSTSSKSAAETVFQQFGGGDVSGTLQDIDLIMDIPVKLTVELGRTRMTIK 76 D+ E+ + + +F + +DID I+DIP++L V +GRTR+ ++ Sbjct: 20 DMAKALEMEKAMKAKEEVQSPHIDEFTVTEEKPKTRDIDFILDIPLELVVVIGRTRILVQ 79 Query: 77 ELLRLTQGSVVALDGLAGEPLDILINGYLIAQGEVVVVADKYGVRITDIITPSERMRRLS 136 ELL+LTQGSVVALD LAGEP+++ +NG L+ +GEVVVV +K+G+RITDII+P ER+++L Sbjct: 80 ELLQLTQGSVVALDKLAGEPMEVYVNGKLVGRGEVVVVNEKFGIRITDIISPQERVKQLG 139 >UniRef50_C6BUR6 Flagellar motor switch protein FliN n=21 Tax=Proteobacteria RepID=C6BUR6_DESAD Length = 229 Score = 116 bits (291), Expect = 2e-25, Method: Composition-based stats. Identities = 55/132 (41%), Positives = 80/132 (60%), Gaps = 14/132 (10%) Query: 19 WAEALSEQKSTSSKSAAETVF--------------QQFGGGDVSGTLQDIDLIMDIPVKL 64 WA AL+E + E F + G+ +D+D I+DIP+ + Sbjct: 98 WAAALAEDTGDDIRKEKEQEFLRTQTRDADFKDLTNEAKNPRHDGSRRDLDFILDIPLDV 157 Query: 65 TVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQGEVVVVADKYGVRITD 124 + ELGR +M I ELL+L GSVV L LAGEPL+I +NG L+A+GE VV+ +K+G+R+TD Sbjct: 158 SAELGRAKMLINELLQLGTGSVVELTKLAGEPLEIYVNGKLVARGEAVVINEKFGIRLTD 217 Query: 125 IITPSERMRRLS 136 II+P ER++ L+ Sbjct: 218 IISPIERVKHLA 229 >UniRef50_Q51466 Flagellar motor switch protein fliN n=23 Tax=Proteobacteria RepID=FLIN_PSEAE Length = 157 Score = 116 bits (290), Expect = 3e-25, Method: Composition-based stats. Identities = 54/129 (41%), Positives = 82/129 (63%) Query: 8 ADDNNGAMDDLWAEALSEQKSTSSKSAAETVFQQFGGGDVSGTLQDIDLIMDIPVKLTVE 67 + D+ A+ + ST E ++D+I+DIPV +++E Sbjct: 29 SQDDIDALMAQGGATPVAEPSTPRAPMEEFGASPKAPTISGLEGPNLDVILDIPVTISME 88 Query: 68 LGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQGEVVVVADKYGVRITDIIT 127 +G T ++I+ LL+L QGSV+ LD LAGEPLD+L+NG LIA GEVVVV +K+G+R+TD+I+ Sbjct: 89 VGHTDISIRNLLQLNQGSVIELDRLAGEPLDVLVNGTLIAHGEVVVVNEKFGIRLTDVIS 148 Query: 128 PSERMRRLS 136 PSER+++L Sbjct: 149 PSERIKKLR 157 >UniRef50_A6W8L1 Flagellar motor switch protein FliN n=1 Tax=Kineococcus radiotolerans SRS30216 RepID=A6W8L1_KINRD Length = 249 Score = 116 bits (290), Expect = 3e-25, Method: Composition-based stats. Identities = 52/130 (40%), Positives = 76/130 (58%), Gaps = 1/130 (0%) Query: 1 MSDMNN-PADDNNGAMDDLWAEALSEQKSTSSKSAAETVFQQFGGGDVSGTLQDIDLIMD 59 +S + + + + L L+ + A F G +G + +DL+ D Sbjct: 117 LSQIADGAVAVIDAGGETLALIGLTLTAQPDTTPAPMPSFAPAGTPAPAGPRRTMDLLRD 176 Query: 60 IPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQGEVVVVADKYG 119 + + +TVELGRT MT+++LL LT GSVV LD AG P D+L+NG LIA+GEVVVV + Y Sbjct: 177 VQMDVTVELGRTSMTVQDLLALTPGSVVELDRAAGSPADVLVNGQLIARGEVVVVDEDYA 236 Query: 120 VRITDIITPS 129 +RIT+I+TP Sbjct: 237 IRITEIVTPE 246 >UniRef50_C4ZAN3 Flagellar motor switch protein n=2 Tax=Clostridiales RepID=C4ZAN3_EUBR3 Length = 404 Score = 116 bits (290), Expect = 3e-25, Method: Composition-based stats. Identities = 45/115 (39%), Positives = 71/115 (61%), Gaps = 2/115 (1%) Query: 17 DLWAEALSEQKS-TSSKSAAETVFQQFGGGDVSG-TLQDIDLIMDIPVKLTVELGRTRMT 74 + + + Q + + F FG ++IDLIMD+P+++TVELGRT+ + Sbjct: 283 GMMNQNMGAQNMIGNQVNVQNAQFTPFGAMPNQVYQPENIDLIMDVPLEVTVELGRTKKS 342 Query: 75 IKELLRLTQGSVVALDGLAGEPLDILINGYLIAQGEVVVVADKYGVRITDIITPS 129 I E+L G ++ L+ LAGEP+DIL+NG +A+GEVVV+ + +GVRIT+I+ Sbjct: 343 ISEILDFGPGKIIELNKLAGEPIDILVNGKYVAKGEVVVIEESFGVRITEIVNSK 397 >UniRef50_B8FK37 Flagellar motor switch protein FliN n=3 Tax=Bacteria RepID=B8FK37_DESAA Length = 119 Score = 115 bits (289), Expect = 4e-25, Method: Composition-based stats. Identities = 56/119 (47%), Positives = 81/119 (68%) Query: 18 LWAEALSEQKSTSSKSAAETVFQQFGGGDVSGTLQDIDLIMDIPVKLTVELGRTRMTIKE 77 + EAL ++ + + + T G + D+D I+DIP+ +TVELGRT M IK+ Sbjct: 1 MEEEALQQEMNENLPAENMTDGLPAAGDADADGDGDLDFILDIPLDITVELGRTSMRIKD 60 Query: 78 LLRLTQGSVVALDGLAGEPLDILINGYLIAQGEVVVVADKYGVRITDIITPSERMRRLS 136 LL+L QG+VV L LAGEP++I +NG L A+GEVVVV +K+GVR+TDI++P ER++ L Sbjct: 61 LLQLGQGAVVELTKLAGEPMEIFVNGKLFARGEVVVVNEKFGVRLTDIVSPQERIKSLR 119 >UniRef50_B0MPD4 Putative uncharacterized protein n=1 Tax=Eubacterium siraeum DSM 15702 RepID=B0MPD4_9FIRM Length = 419 Score = 115 bits (289), Expect = 4e-25, Method: Composition-based stats. Identities = 41/115 (35%), Positives = 77/115 (66%), Gaps = 1/115 (0%) Query: 23 LSEQKSTSSKSAAETVFQQFGGGDVSGTLQDIDLIMDIPVKLTVELGRTRMTIKELLRLT 82 + Q + + ++A F+ F S +++ L+MD+P++++VE+G T+ IK++L + Sbjct: 304 MQPQPAVNYRNAQLAQFENFEAPLGSEQKENLQLLMDVPLQISVEIGSTKKKIKDILEFS 363 Query: 83 QGSVVALDGLAGEPLDILINGYLIAQGEVVVVADKYGVRITDIITPSERMRRLSR 137 QG+++ L+ AG P+D+++NG LIA+G+VVV+ D + VRIT+I+ S+ M L + Sbjct: 364 QGTIIELERQAGAPVDVMVNGNLIARGDVVVIDDNFAVRITEIV-KSKFMDSLGK 417 >UniRef50_A1WGY8 Flagellar motor switch protein FliN n=19 Tax=Proteobacteria RepID=A1WGY8_VEREI Length = 163 Score = 115 bits (289), Expect = 4e-25, Method: Composition-based stats. Identities = 73/148 (49%), Positives = 96/148 (64%), Gaps = 17/148 (11%) Query: 7 PADDNNGAMDDLWAEALSEQKSTSSKSAAETVFQQFGGGDVSGT---------------- 50 PAD+ + WAEAL EQK + A G V Sbjct: 15 PADNAADDPFNGWAEALKEQKRSDEPPAEGQQGGPLSGEPVRPPLAGAASGASAVNGGEQ 74 Query: 51 -LQDIDLIMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQG 109 + DI+ ++DIPV+L+VELGRT++ IK +L+L QGSVV LD LAGEP+D+L+NGYLIAQG Sbjct: 75 VINDINRVLDIPVQLSVELGRTKVPIKYILQLAQGSVVELDALAGEPMDVLVNGYLIAQG 134 Query: 110 EVVVVADKYGVRITDIITPSERMRRLSR 137 EVVVV DK+G+R+TD++TPSER+RR+SR Sbjct: 135 EVVVVNDKFGIRLTDVVTPSERLRRVSR 162 >UniRef50_B9PA59 Predicted protein n=2 Tax=cellular organisms RepID=B9PA59_POPTR Length = 284 Score = 115 bits (288), Expect = 5e-25, Method: Composition-based stats. Identities = 50/90 (55%), Positives = 70/90 (77%) Query: 46 DVSGTLQDIDLIMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYL 105 S + ID ++D+P+ ++V +G RM IK+LL+L QGSVV LD LAGEP++ILIN L Sbjct: 195 RTSEPPESIDFLLDVPLTVSVRVGTARMLIKDLLQLGQGSVVELDKLAGEPMEILINDKL 254 Query: 106 IAQGEVVVVADKYGVRITDIITPSERMRRL 135 +A+GEVV+V DKYGVR+TDI++P ER++ L Sbjct: 255 VARGEVVMVNDKYGVRLTDIVSPIERIKSL 284 >UniRef50_C4G689 Putative uncharacterized protein n=1 Tax=Abiotrophia defectiva ATCC 49176 RepID=C4G689_ABIDE Length = 370 Score = 114 bits (285), Expect = 1e-24, Method: Composition-based stats. Identities = 44/115 (38%), Positives = 69/115 (60%), Gaps = 1/115 (0%) Query: 13 GAMDDLWAEALSEQKSTSSKSAAETVFQQFGGGDVS-GTLQDIDLIMDIPVKLTVELGRT 71 + + + A FQ F ++I LIMD+P+++TVELGRT Sbjct: 255 QPTAPAPQPMPTPAMPSQPVNVAPAQFQAFDTNINPLMQQENIGLIMDVPLEVTVELGRT 314 Query: 72 RMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQGEVVVVADKYGVRITDII 126 TIKE+L + G+++ L+ LAGE +D+L+NG +A+GEVVV+ D +G+RIT+I+ Sbjct: 315 NKTIKEILDFSPGTIIELNKLAGEAIDLLVNGKYVAKGEVVVIEDNFGIRITEIV 369 >UniRef50_Q3BU42 Flagellar motor switch/type III secretory pathway protein FliN n=9 Tax=Xanthomonas RepID=Q3BU42_XANC5 Length = 112 Score = 113 bits (284), Expect = 1e-24, Method: Composition-based stats. Identities = 50/104 (48%), Positives = 74/104 (71%), Gaps = 1/104 (0%) Query: 34 AAETVFQQFGGGDVSGTLQ-DIDLIMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDGL 92 A+ F ++D+I+D+PV L++E+GR R+ I+ LL+L QGSVV L+ Sbjct: 9 ASPATFDSLQAEQDQNAADLNLDVILDVPVTLSLEVGRARIPIRNLLQLNQGSVVELERG 68 Query: 93 AGEPLDILINGYLIAQGEVVVVADKYGVRITDIITPSERMRRLS 136 AGEPLD+ +NG LIA GEVVV+ D++G+R+TD+++PSER+RRL Sbjct: 69 AGEPLDVYVNGTLIAHGEVVVINDRFGIRLTDVVSPSERIRRLR 112 >UniRef50_C4Z5H2 Flagellar motor switch protein FliN/FliY n=3 Tax=Bacteria RepID=C4Z5H2_EUBE2 Length = 437 Score = 113 bits (284), Expect = 1e-24, Method: Composition-based stats. Identities = 44/118 (37%), Positives = 71/118 (60%), Gaps = 3/118 (2%) Query: 12 NGAMDDLWAEALSEQ--KSTSSKSAAETVFQQFGGGDVS-GTLQDIDLIMDIPVKLTVEL 68 M + + + Q + A FQ F ++I+LI D+P+++TVEL Sbjct: 319 GMPMQGMMGQPMPMQGYAQPQDVNVAPAAFQPFATDVNPISQKENIELIKDVPLEVTVEL 378 Query: 69 GRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQGEVVVVADKYGVRITDII 126 GRT +IK++L G++V L+ +AGE +D+L+NG +A+GEVVV+ + +GVRIT+II Sbjct: 379 GRTTKSIKDILEFAPGTIVELNKIAGESVDVLVNGKYVAKGEVVVIEESFGVRITEII 436 >UniRef50_C7R0I7 Flagellar motor switch protein FliN n=1 Tax=Jonesia denitrificans DSM 20603 RepID=C7R0I7_JONDD Length = 259 Score = 113 bits (283), Expect = 2e-24, Method: Composition-based stats. Identities = 47/127 (37%), Positives = 75/127 (59%), Gaps = 2/127 (1%) Query: 9 DDNNGAMDDLWAEALSEQKSTSSKSAAETVFQQFGGGDVSGTLQD--IDLIMDIPVKLTV 66 +D A A + Q S+ S E + F + D + L+ D+ + LTV Sbjct: 133 EDVPVEKPSPAASARTAQAEPSAPSPTEPEIRPFTPPMMGSGTGDDKLRLLYDVEMTLTV 192 Query: 67 ELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQGEVVVVADKYGVRITDII 126 E+GR ++ ++++L LT GS+V LD +AG P D+L+NG+L+A+GEVVVV + YG+R+T+II Sbjct: 193 EIGRAKLPVRQVLDLTPGSIVELDRVAGAPADLLVNGHLVARGEVVVVDEDYGLRVTEII 252 Query: 127 TPSERMR 133 +E Sbjct: 253 DTTEVFS 259 >UniRef50_Q30VB8 Surface presentation of antigens (SPOA) protein n=4 Tax=Deltaproteobacteria RepID=Q30VB8_DESDG Length = 175 Score = 112 bits (280), Expect = 4e-24, Method: Composition-based stats. Identities = 49/97 (50%), Positives = 73/97 (75%) Query: 40 QQFGGGDVSGTLQDIDLIMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDI 99 ++ +++D I+DIP+ ++ ELGRTR+ I ELL+L QGSVV L+ LAGEPL+I Sbjct: 79 EEAKSPRPDSGKRELDFILDIPLDVSAELGRTRLLINELLQLGQGSVVELNKLAGEPLEI 138 Query: 100 LINGYLIAQGEVVVVADKYGVRITDIITPSERMRRLS 136 +NG L+A+GE VV+ +K+GVR+TDII+P ER+++L Sbjct: 139 YVNGKLVARGEAVVINEKFGVRLTDIISPIERVKQLG 175 >UniRef50_B0P9X9 Putative uncharacterized protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0P9X9_9FIRM Length = 446 Score = 112 bits (280), Expect = 4e-24, Method: Composition-based stats. Identities = 41/124 (33%), Positives = 72/124 (58%), Gaps = 2/124 (1%) Query: 16 DDLWAEALSEQKSTSSKSAAETVFQQFG--GGDVSGTLQDIDLIMDIPVKLTVELGRTRM 73 + + + + T F QF D + ++DL+M + + ++VE+G+T+ Sbjct: 320 QQAYGMQEPQPATQKPINVQNTQFPQFTVQQTDSPTSNANMDLLMGVSLDVSVEIGQTKR 379 Query: 74 TIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQGEVVVVADKYGVRITDIITPSERMR 133 IK+++ QG+V+ L+ AG P+DI++NG L+A+G+VVV+ D +GVRIT+I+ E M Sbjct: 380 KIKDIIDFGQGTVIELNKQAGAPVDIVVNGRLLARGDVVVIDDNFGVRITEIVGTKELME 439 Query: 134 RLSR 137 L Sbjct: 440 SLKE 443 >UniRef50_Q6AJS8 Probable flagellar motor switch protein (FliN) n=1 Tax=Desulfotalea psychrophila RepID=Q6AJS8_DESPS Length = 123 Score = 112 bits (280), Expect = 4e-24, Method: Composition-based stats. Identities = 37/98 (37%), Positives = 72/98 (73%) Query: 40 QQFGGGDVSGTLQDIDLIMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDI 99 +Q + + +D + D+P++++VE+GR+++ IK+LL + +G V+ L+ +AG+PLD+ Sbjct: 26 EQEHTTLENNEARSLDFLYDVPLEVSVEVGRSKILIKDLLNMGEGYVIELNKVAGDPLDL 85 Query: 100 LINGYLIAQGEVVVVADKYGVRITDIITPSERMRRLSR 137 +N LIA+GE V++ DK+G+R+TD+++ S+R+ RL + Sbjct: 86 YVNSRLIARGEAVMIGDKFGIRLTDVVSASDRLERLGK 123 >UniRef50_A9KNE6 CheC, inhibitor of MCP methylation / FliN fusion protein n=2 Tax=Bacteria RepID=A9KNE6_CLOPH Length = 401 Score = 111 bits (279), Expect = 5e-24, Method: Composition-based stats. Identities = 44/109 (40%), Positives = 71/109 (65%), Gaps = 1/109 (0%) Query: 19 WAEALSEQKSTSSKSAAETVFQQFGGGDVSG-TLQDIDLIMDIPVKLTVELGRTRMTIKE 77 + Q + + A FQ F ++IDL++D+P+++TVELGRT +I+E Sbjct: 292 MSMQQVPQGMVQNVNIAPAQFQPFVNTGSPLLQTENIDLLLDVPLEVTVELGRTSKSIRE 351 Query: 78 LLRLTQGSVVALDGLAGEPLDILINGYLIAQGEVVVVADKYGVRITDII 126 +L G++V L+ LAGEP+D+L+NG +A+GEVVV+ + +G+R+TDII Sbjct: 352 ILDFAPGTIVELNRLAGEPIDVLVNGKYVAKGEVVVIEEAFGIRVTDII 400 >UniRef50_Q2RKB6 CheC, inhibitor of MCP methylation n=1 Tax=Moorella thermoacetica ATCC 39073 RepID=Q2RKB6_MOOTA Length = 395 Score = 111 bits (277), Expect = 9e-24, Method: Composition-based stats. Identities = 40/90 (44%), Positives = 60/90 (66%) Query: 48 SGTLQDIDLIMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIA 107 + ++IDLI+D+P+ + V LG I+++L L G++V LD L EP+ I +NG IA Sbjct: 306 GASSRNIDLILDVPLDIEVILGTAMKRIQDILSLAPGAIVELDRLVEEPVQITVNGTPIA 365 Query: 108 QGEVVVVADKYGVRITDIITPSERMRRLSR 137 QGEVV+V + +GVRIT I+ P ER+ L + Sbjct: 366 QGEVVIVNENFGVRITHILEPYERINHLRQ 395 >UniRef50_Q0AA08 Flagellar motor switch protein FliN n=49 Tax=cellular organisms RepID=Q0AA08_ALHEH Length = 226 Score = 111 bits (277), Expect = 1e-23, Method: Composition-based stats. Identities = 55/132 (41%), Positives = 88/132 (66%), Gaps = 2/132 (1%) Query: 7 PADDNNGAMDDLWAEALSEQKSTSSKSAAETVFQQFGGGDVS--GTLQDIDLIMDIPVKL 64 P + + G A Q++ ++ A + G + ++D+IMDIPV L Sbjct: 95 PEEPSAGQRAATEARETQRQENWQAERAELDELEPDAGAGRNLGDEEANLDVIMDIPVTL 154 Query: 65 TVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQGEVVVVADKYGVRITD 124 ++E+GRT+++I+ LL+L QGSVV LD LAGEPLD+++NG LIA GEVVVV +++G+R+TD Sbjct: 155 SMEIGRTQISIRHLLQLNQGSVVELDRLAGEPLDVMVNGTLIAHGEVVVVNERFGIRLTD 214 Query: 125 IITPSERMRRLS 136 +I+ +ER+++L Sbjct: 215 VISAAERVKKLR 226 >UniRef50_B4U6V5 Flagellar motor switch protein FliN n=1 Tax=Hydrogenobaculum sp. Y04AAS1 RepID=B4U6V5_HYDS0 Length = 149 Score = 110 bits (276), Expect = 1e-23, Method: Composition-based stats. Identities = 49/131 (37%), Positives = 72/131 (54%), Gaps = 5/131 (3%) Query: 6 NPADDNNGAMDDLWAEALSEQKSTSSKSAAETVFQQFGGGDVSGTLQDIDLIMDIPVKLT 65 P N+ + LW EA+ Q T S + Q +D+ I+DIP+ +T Sbjct: 22 EPTPQNDEDLMKLWEEAIQAQAQTESSAEN-----QQAQATTQDISKDLQRILDIPLSIT 76 Query: 66 VELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQGEVVVVADKYGVRITDI 125 V +G T +TIKELL L GSV+ALD + + NG LIA+ E+VVV + +G+RI +I Sbjct: 77 VVIGTTVITIKELLNLRPGSVMALDESINSFVSVYANGKLIAKAELVVVGENFGIRIAEI 136 Query: 126 ITPSERMRRLS 136 I ER++ L+ Sbjct: 137 IEKEERVKSLA 147 >UniRef50_A7GZX6 Iron chelatin ABC transporter, substrate binding protein n=20 Tax=Campylobacter RepID=A7GZX6_CAMC5 Length = 286 Score = 109 bits (274), Expect = 2e-23, Method: Composition-based stats. Identities = 41/129 (31%), Positives = 70/129 (54%), Gaps = 4/129 (3%) Query: 8 ADDNNGAMDDLWAEALSEQKSTSSKSAAETVFQQFGGGDVSGTLQDIDLIMDIPVKLTVE 67 D + SE +S A +F +++I+LIMD+ + + V Sbjct: 162 CDHTLMKFFEPTKVGESESQSGDQAKATHGSRSEFSA----EEMRNINLIMDVRLPIRVR 217 Query: 68 LGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQGEVVVVADKYGVRITDIIT 127 +G RM +K++L + GSV+ L+ LA +PL+ILI +IA GEVV++ +G++IT I + Sbjct: 218 IGSKRMLLKDVLSMDIGSVIELNQLANDPLEILIGDKVIALGEVVIIDGNFGIQITQIGS 277 Query: 128 PSERMRRLS 136 ER+++L Sbjct: 278 KRERLQQLK 286 >UniRef50_Q1NP93 Surface presentation of antigens (SPOA) protein n=2 Tax=Deltaproteobacteria RepID=Q1NP93_9DELT Length = 136 Score = 109 bits (274), Expect = 2e-23, Method: Composition-based stats. Identities = 50/136 (36%), Positives = 83/136 (61%) Query: 1 MSDMNNPADDNNGAMDDLWAEALSEQKSTSSKSAAETVFQQFGGGDVSGTLQDIDLIMDI 60 M+D D A A + S + + + GG S + Q++D ++D+ Sbjct: 1 MADEEKNQATEEAGDDWSAALADQGKDSPAFEELEASGAAGGGGAAPSASTQNLDFLLDV 60 Query: 61 PVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQGEVVVVADKYGV 120 P+++TVELGRT M I +LL+LTQGSVV LD AG ++I +N L+ +GEVVVV +++G+ Sbjct: 61 PLEVTVELGRTSMIINKLLQLTQGSVVELDKAAGASVEIYVNRKLMGKGEVVVVNERFGI 120 Query: 121 RITDIITPSERMRRLS 136 R+T+II+ ++R++ + Sbjct: 121 RVTEIISQADRIKSIG 136 >UniRef50_Q67K24 Flagellar motor switch protein n=1 Tax=Symbiobacterium thermophilum RepID=Q67K24_SYMTH Length = 126 Score = 109 bits (274), Expect = 2e-23, Method: Composition-based stats. Identities = 42/110 (38%), Positives = 66/110 (60%), Gaps = 1/110 (0%) Query: 21 EALSEQKSTSSKSAAETVFQQFGGG-DVSGTLQDIDLIMDIPVKLTVELGRTRMTIKELL 79 AL Q + F G + L+ D+ ++LTVELG++R +++E+L Sbjct: 12 AALFAQARQGEQKPEAAAFPDLNPEGSAQGDPSPLGLLADVELELTVELGQSRRSLREIL 71 Query: 80 RLTQGSVVALDGLAGEPLDILINGYLIAQGEVVVVADKYGVRITDIITPS 129 + GSV+ LD AGE +D+L+NG L+A+GEVVV+ + YG+RIT++I P Sbjct: 72 AMGPGSVLELDKHAGEAVDLLVNGQLVARGEVVVIGENYGIRITELINPE 121 >UniRef50_B9L5A1 Flagellar motor switch phosphatase FliY (CheY-Pphosphatase fliY) (Flagellar motor switch protein fliY) n=1 Tax=Thermomicrobium roseum DSM 5159 RepID=B9L5A1_THERP Length = 128 Score = 109 bits (273), Expect = 3e-23, Method: Composition-based stats. Identities = 50/121 (41%), Positives = 66/121 (54%) Query: 12 NGAMDDLWAEALSEQKSTSSKSAAETVFQQFGGGDVSGTLQDIDLIMDIPVKLTVELGRT 71 D L E F + Q ID + D+ V+LT ELG Sbjct: 2 ADRDDTLNRGQEPSSVRPPETPIQEARFVDLRDQPIGNGRQGIDFLRDVEVELTAELGSA 61 Query: 72 RMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQGEVVVVADKYGVRITDIITPSER 131 RM IK +L L GSVV LD LAGEP+++ IN LIA+GEVVVV +K+ VRIT+I++P +R Sbjct: 62 RMRIKHILGLRPGSVVELDRLAGEPVELTINKTLIARGEVVVVDEKFAVRITEIVSPEKR 121 Query: 132 M 132 + Sbjct: 122 L 122 >UniRef50_C1SNF8 Flagellar motor switch protein FliN n=1 Tax=Denitrovibrio acetiphilus DSM 12809 RepID=C1SNF8_9BACT Length = 299 Score = 109 bits (273), Expect = 3e-23, Method: Composition-based stats. Identities = 39/106 (36%), Positives = 72/106 (67%) Query: 31 SKSAAETVFQQFGGGDVSGTLQDIDLIMDIPVKLTVELGRTRMTIKELLRLTQGSVVALD 90 + E FGGG G+ ++DL++DI V ++V++G T+M +K++L + G+++ LD Sbjct: 193 PEDDDEPATGGFGGGYGGGSPSNLDLLLDIDVPVSVKMGSTKMFLKDILTMGSGNIIELD 252 Query: 91 GLAGEPLDILINGYLIAQGEVVVVADKYGVRITDIITPSERMRRLS 136 A EP++++IN +IA+GEVV+V +G RI +I++ +ER+++L Sbjct: 253 ESADEPVELVINNKVIARGEVVIVDGYFGFRIKEIVSRAERIKKLK 298 >UniRef50_C2ED81 Flagellar motor switch protein FliY n=1 Tax=Lactobacillus ruminis ATCC 25644 RepID=C2ED81_9LACO Length = 409 Score = 108 bits (271), Expect = 4e-23, Method: Composition-based stats. Identities = 46/105 (43%), Positives = 70/105 (66%), Gaps = 1/105 (0%) Query: 32 KSAAETVFQQFGGGDVSGTLQDIDLIMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDG 91 ++ FQ G ++DL+MDIP+ L+V LG ++ +++E+L GSV+ L+ Sbjct: 306 VEVSQPSFQTLDGHAQVEG-DNLDLLMDIPLNLSVVLGTSKKSVREILSFNTGSVIELEK 364 Query: 92 LAGEPLDILINGYLIAQGEVVVVADKYGVRITDIITPSERMRRLS 136 L EPLDIL+NG LIAQGEVVV+ D +GVRIT+I++ S+R+ + Sbjct: 365 LTDEPLDILLNGKLIAQGEVVVINDNFGVRITNILSQSQRINNMR 409 >UniRef50_Q3ADB7 Flagellar motor switch protein n=1 Tax=Carboxydothermus hydrogenoformans Z-2901 RepID=Q3ADB7_CARHZ Length = 347 Score = 108 bits (269), Expect = 7e-23, Method: Composition-based stats. Identities = 43/123 (34%), Positives = 75/123 (60%) Query: 13 GAMDDLWAEALSEQKSTSSKSAAETVFQQFGGGDVSGTLQDIDLIMDIPVKLTVELGRTR 72 G+ + A E + + E ++ V T + ++LI+DIP+K+ V LGRTR Sbjct: 225 GSPETEPAVMAHEMLEGAKATNIEKKVEKAEEQFVLPTDEKLELILDIPLKVEVVLGRTR 284 Query: 73 MTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQGEVVVVADKYGVRITDIITPSERM 132 IKE+L G+++ LD L E +++L+NG L+A+GE+VVV + +G++I I++P ER+ Sbjct: 285 RPIKEILSFGPGAIIDLDQLVDEDVEVLVNGTLVAKGEIVVVGENFGIKINQILSPKERL 344 Query: 133 RRL 135 ++ Sbjct: 345 SKI 347 >UniRef50_A8RWA3 Putative uncharacterized protein n=3 Tax=Clostridiales RepID=A8RWA3_9CLOT Length = 320 Score = 106 bits (265), Expect = 2e-22, Method: Composition-based stats. Identities = 38/134 (28%), Positives = 71/134 (52%), Gaps = 6/134 (4%) Query: 1 MSDMNNPADDNNGAMDDLWAEALSEQKSTSSKSAAETVFQQFGGGDVSGTLQDI----DL 56 M+DM P + G + A + + + + E F +F + + I Sbjct: 189 MADM--PCQETGGQTPGMPAAGMQTAEHKEAIAVQEVSFPEFKYTPIVYAKEQIGEEKKK 246 Query: 57 IMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQGEVVVVAD 116 ++DI + ++V LG T ++K++L L +G ++ LD AG P D+++NG LI +G+V+V D Sbjct: 247 LLDITLDVSVRLGSTVCSVKDILSLKEGQLLVLDKQAGSPADVVVNGELIGRGDVLVTGD 306 Query: 117 KYGVRITDIITPSE 130 ++G RI +++ E Sbjct: 307 RFGARIIEVVGKRE 320 >UniRef50_D2R538 Flagellar motor switch protein FliN n=2 Tax=Planctomycetaceae RepID=D2R538_9PLAN Length = 212 Score = 106 bits (265), Expect = 2e-22, Method: Composition-based stats. Identities = 40/117 (34%), Positives = 71/117 (60%) Query: 14 AMDDLWAEALSEQKSTSSKSAAETVFQQFGGGDVSGTLQDIDLIMDIPVKLTVELGRTRM 73 A + ++ + + A F+ SG ++L+ D+ + L +ELGRT M Sbjct: 94 AQAEQAIASVDQPVDPAIAGIAPFAFRDLAAAPPSGEKATLELLRDVDLDLRIELGRTEM 153 Query: 74 TIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQGEVVVVADKYGVRITDIITPSE 130 ++++L+L +GSVV LD LAG+P+DI +NG LIA+GEV+V+ D + VR+ ++++ + Sbjct: 154 FLEDVLKLRRGSVVTLDKLAGDPVDIYVNGRLIARGEVLVLNDNFCVRVAELLSGDD 210 >UniRef50_Q01PP4 Flagellar motor switch protein FliN n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q01PP4_SOLUE Length = 282 Score = 106 bits (265), Expect = 3e-22, Method: Composition-based stats. Identities = 35/112 (31%), Positives = 66/112 (58%) Query: 25 EQKSTSSKSAAETVFQQFGGGDVSGTLQDIDLIMDIPVKLTVELGRTRMTIKELLRLTQG 84 + ++A E + + ++L++D+ + +++ G+T + +K++L+LT G Sbjct: 171 SPAAGQPEAAPEDAGGEPHTVKRNDMPPTMELLLDVELPVSISFGKTEILMKDVLKLTTG 230 Query: 85 SVVALDGLAGEPLDILINGYLIAQGEVVVVADKYGVRITDIITPSERMRRLS 136 S+V L+ EP+++L+N LIA+GEVVVV YGVRI I+ +R+R + Sbjct: 231 SIVELNRGVNEPVEVLVNHCLIARGEVVVVEGNYGVRIQQIVNRQDRLRSIR 282 >UniRef50_B6BN04 Flagellar motor switch FliN n=1 Tax=Campylobacterales bacterium GD 1 RepID=B6BN04_9PROT Length = 288 Score = 106 bits (264), Expect = 3e-22, Method: Composition-based stats. Identities = 37/90 (41%), Positives = 62/90 (68%) Query: 47 VSGTLQDIDLIMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLI 106 + +I LIMD+ + + V +G+ +M +K++L + GSV+ L+ LA +PLDIL++ ++I Sbjct: 198 SGEEMNNISLIMDVKLPVRVRIGKKKMLLKDVLNMDIGSVIELNQLANDPLDILVDNHVI 257 Query: 107 AQGEVVVVADKYGVRITDIITPSERMRRLS 136 AQGEVV+V +GV+IT I + ER+ +L Sbjct: 258 AQGEVVIVDGNFGVQITSIGSKRERLTQLK 287 >UniRef50_D0YPX2 Flagellar motor switch protein FliN n=2 Tax=Mobiluncus mulieris RepID=D0YPX2_9ACTO Length = 254 Score = 106 bits (264), Expect = 3e-22, Method: Composition-based stats. Identities = 38/102 (37%), Positives = 64/102 (62%) Query: 33 SAAETVFQQFGGGDVSGTLQDIDLIMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDGL 92 +A T + + L+ D+ + LT E+GRT++ + ++L L+ GSV+ LD Sbjct: 152 ESATTPPASQATATAEQRAESMKLLYDVEMTLTAEIGRTKLAVHDVLDLSPGSVIELDRS 211 Query: 93 AGEPLDILINGYLIAQGEVVVVADKYGVRITDIITPSERMRR 134 AG D+++NG LIA GE+VVV ++YG+RIT+I++ +E+ R Sbjct: 212 AGSAADVMVNGRLIAHGEIVVVDEEYGIRITEIVSLAEQQNR 253 >UniRef50_A6Q2L3 Flagellar motor switch protein FliN n=1 Tax=Nitratiruptor sp. SB155-2 RepID=A6Q2L3_NITSB Length = 133 Score = 105 bits (263), Expect = 3e-22, Method: Composition-based stats. Identities = 40/136 (29%), Positives = 78/136 (57%), Gaps = 4/136 (2%) Query: 1 MSDMNNPADDNNGAMDDLWAEALSEQKSTSSKSAAETVFQQFGGGDVSGTLQDIDLIMDI 60 MS+ NP+ + + + LS + + + A E+ + + +++D+ Sbjct: 1 MSEETNPSPEEQNSEEQP---ELSPDELMAQQFAQES-YGSETEEEDRIEKSKFSILLDV 56 Query: 61 PVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQGEVVVVADKYGV 120 P+ + VE+G T+M ++E+L+L SVV L+ EP+D+ +NG +IA+GE+ V + +G+ Sbjct: 57 PLDVIVEIGSTQMPLEEVLKLNPNSVVELNRFIHEPVDLKVNGKVIAKGELYTVKNNFGL 116 Query: 121 RITDIITPSERMRRLS 136 +IT ++TP ER++ L Sbjct: 117 KITHVVTPEERLKILE 132 >UniRef50_A0LT68 Flagellar motor switch protein FliN n=1 Tax=Acidothermus cellulolyticus 11B RepID=A0LT68_ACIC1 Length = 123 Score = 105 bits (263), Expect = 3e-22, Method: Composition-based stats. Identities = 43/117 (36%), Positives = 66/117 (56%) Query: 13 GAMDDLWAEALSEQKSTSSKSAAETVFQQFGGGDVSGTLQDIDLIMDIPVKLTVELGRTR 72 LS SS+ A + ++L+ ++ + +T ELGRTR Sbjct: 1 MTEISPSDSVLSALVGDSSEPAESVSPVNSAASAQTVRASRLELLQNVEMGVTAELGRTR 60 Query: 73 MTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQGEVVVVADKYGVRITDIITPS 129 MT++ELL L G VV L+ AG P+D+ +NG LIA+GEVVV+ +++GVRI++I+ P Sbjct: 61 MTVRELLSLAPGMVVELNRAAGSPIDLYVNGTLIARGEVVVIDEEFGVRISEIVGPD 117 >UniRef50_Q8D3E9 FliN protein n=3 Tax=Enterobacteriaceae RepID=Q8D3E9_WIGBR Length = 135 Score = 105 bits (263), Expect = 4e-22, Method: Composition-based stats. Identities = 65/138 (47%), Positives = 97/138 (70%), Gaps = 4/138 (2%) Query: 1 MSDMN-NPADDNNGAMDDLWAEALSEQKSTSSKSAAETVFQQFGGGDVSGTLQDIDLIMD 59 M+D+ P N +++DL + ++ +S+ E + +S +DI+LI+D Sbjct: 1 MNDIKKEPEKIKNDSVEDLNNDDEIKELKANSEEIKEIDSSKIKNKKLS---EDINLILD 57 Query: 60 IPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQGEVVVVADKYG 119 IP+K+T+ELGRT+MTI++LL L + S+V LDG GEPLDILIN YL+A+GEVVV+ ++YG Sbjct: 58 IPIKMTIELGRTKMTIRDLLLLKRDSIVTLDGEIGEPLDILINDYLVARGEVVVMKERYG 117 Query: 120 VRITDIITPSERMRRLSR 137 ++I DIITP ER+RRL+R Sbjct: 118 IKILDIITPEERIRRLNR 135 >UniRef50_C2KZ02 Possible flagellar motor switch protein FliY n=1 Tax=Oribacterium sinus F0268 RepID=C2KZ02_9FIRM Length = 472 Score = 105 bits (263), Expect = 4e-22, Method: Composition-based stats. Identities = 43/137 (31%), Positives = 75/137 (54%), Gaps = 2/137 (1%) Query: 1 MSDMNNPADDNNGAMDDLWAEALSEQKSTSSKSAAETVFQQFG--GGDVSGTLQDIDLIM 58 ++ M + D+ E KS+ ++F GG + +++M Sbjct: 336 LNQMQQSQTQMLELIRDIQGGKNKEAKSSEPSLIKPLNSREFENEGGGAGENPDNREMLM 395 Query: 59 DIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQGEVVVVADKY 118 +P++++VE+GRTR +K++L TQGS+V LD +AGE D+ +NG IA+G++VVV + + Sbjct: 396 KVPLEISVEIGRTRKLVKDILDFTQGSLVVLDKMAGEQADLYVNGECIAKGDIVVVEENF 455 Query: 119 GVRITDIITPSERMRRL 135 G+RIT+I+ L Sbjct: 456 GIRITEILKKDINQESL 472 >UniRef50_C3XES1 Flagellar motor switch protein FliY n=1 Tax=Helicobacter bilis ATCC 43879 RepID=C3XES1_9HELI Length = 283 Score = 105 bits (263), Expect = 4e-22, Method: Composition-based stats. Identities = 40/128 (31%), Positives = 68/128 (53%) Query: 9 DDNNGAMDDLWAEALSEQKSTSSKSAAETVFQQFGGGDVSGTLQDIDLIMDIPVKLTVEL 68 D + L L K+ A T +++I +++DI + + V + Sbjct: 155 DSVKSELIMLTKNDLLTHVPKDLKAPASTASGNKDVSLSDKEMRNIGMLLDIGLSVKVRI 214 Query: 69 GRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQGEVVVVADKYGVRITDIITP 128 G+ RM +K+++ + GSVV L+ LA +PL+IL+N +I +GEVVVV + ++IT+I T Sbjct: 215 GQKRMLLKDVISMDIGSVVELNQLASDPLEILVNDKIIGKGEVVVVDGNFAIQITEIGTK 274 Query: 129 SERMRRLS 136 ER+ L Sbjct: 275 KERLESLR 282 >UniRef50_C0GJF1 Flagellar motor switch protein FliN n=1 Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GJF1_9FIRM Length = 141 Score = 105 bits (262), Expect = 5e-22, Method: Composition-based stats. Identities = 43/128 (33%), Positives = 69/128 (53%), Gaps = 3/128 (2%) Query: 8 ADDNNGAMDDLWAEALSEQKSTSSKSAAETVFQQFGGGDVSGTLQDIDLIMDIPVKLTVE 67 + + E LS Q + G +++ I+DIP++++V Sbjct: 16 TQVPSETEETPVVEDLSFQAKEMPQPKKNKPRAANAGMQSHP---NLERILDIPLRVSVS 72 Query: 68 LGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQGEVVVVADKYGVRITDIIT 127 LG+T I +++ L G++V D GEP+DI +NG LIA+GEVVVV + +GVRI+ IIT Sbjct: 73 LGKTEKPILDVVSLAPGAIVDFDRNVGEPVDITLNGKLIARGEVVVVGEHFGVRISQIIT 132 Query: 128 PSERMRRL 135 P +R+ + Sbjct: 133 PQQRIENM 140 >UniRef50_A1SEN5 Flagellar motor switch protein FliN n=1 Tax=Nocardioides sp. JS614 RepID=A1SEN5_NOCSJ Length = 246 Score = 104 bits (261), Expect = 6e-22, Method: Composition-based stats. Identities = 44/127 (34%), Positives = 73/127 (57%) Query: 3 DMNNPADDNNGAMDDLWAEALSEQKSTSSKSAAETVFQQFGGGDVSGTLQDIDLIMDIPV 62 ++ P D+ A L + + + +G + I+++ + + Sbjct: 117 EIAEPFVIVPLEGSDVVAALLVPEALLAHPADDTPALPTTSAAAPTGDRRGIEMLHGVDM 176 Query: 63 KLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQGEVVVVADKYGVRI 122 ++TVE+GR RMT++ELL L G+V+ LD AG P D+L+NG LIA+GEVVV+ + +G+RI Sbjct: 177 EVTVEIGRARMTVRELLDLAPGAVLELDRAAGSPADLLVNGRLIARGEVVVIDEDFGLRI 236 Query: 123 TDIITPS 129 T+I+T S Sbjct: 237 TEIVTDS 243 >UniRef50_B2V6S4 Flagellar motor switch protein FliN n=3 Tax=Sulfurihydrogenibium RepID=B2V6S4_SULSY Length = 194 Score = 104 bits (261), Expect = 7e-22, Method: Composition-based stats. Identities = 50/146 (34%), Positives = 83/146 (56%), Gaps = 11/146 (7%) Query: 2 SDMNNPADDNNGAMDDL---WAEALSEQKSTSSKSAAETVFQQFGGGD--------VSGT 50 S+M N + G+ +DL W+E L E+KS S + + Sbjct: 44 SEMLNESGKKEGSQEDLAAQWSEMLHEEKSESVDANTHQTPLKESEKKESFTKEEFSPEI 103 Query: 51 LQDIDLIMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQGE 110 L +D+++DIP+ +TVE+G M+I+E+L+L SV+ LD EP+D+ +NG L+A+GE Sbjct: 104 LNKLDILLDIPITITVEVGSKSMSIEEILKLAPSSVIDLDKYLNEPIDLKVNGVLVAKGE 163 Query: 111 VVVVADKYGVRITDIITPSERMRRLS 136 + V D + ++IT+I+T ER+R +S Sbjct: 164 LYQVDDNFAIKITEILTKEERVRLVS 189 >UniRef50_A0LDK9 Flagellar motor switch protein FliN n=1 Tax=Magnetococcus sp. MC-1 RepID=A0LDK9_MAGSM Length = 137 Score = 104 bits (259), Expect = 1e-21, Method: Composition-based stats. Identities = 40/119 (33%), Positives = 69/119 (57%) Query: 18 LWAEALSEQKSTSSKSAAETVFQQFGGGDVSGTLQDIDLIMDIPVKLTVELGRTRMTIKE 77 + + + + + F ++++L+MD+P++++V LG IK+ Sbjct: 19 MGDDDGMSDLARELRDEMDHAENPFDVSTDGDLPKNLELLMDVPLEVSVRLGSVSYQIKD 78 Query: 78 LLRLTQGSVVALDGLAGEPLDILINGYLIAQGEVVVVADKYGVRITDIITPSERMRRLS 136 LLRL +GS+V L+ A +PL+I +N L+A GEVV++ DK G+RITDI++ ER+ L Sbjct: 79 LLRLNKGSLVELEKEADDPLEIYVNDRLLAYGEVVMIKDKLGIRITDIVSLKERLENLR 137 >UniRef50_Q30SP4 Flagellar motor switch FliN n=1 Tax=Sulfurimonas denitrificans DSM 1251 RepID=Q30SP4_SULDN Length = 283 Score = 104 bits (259), Expect = 1e-21, Method: Composition-based stats. Identities = 41/122 (33%), Positives = 70/122 (57%) Query: 15 MDDLWAEALSEQKSTSSKSAAETVFQQFGGGDVSGTLQDIDLIMDIPVKLTVELGRTRMT 74 ++L + K+ E+ S + +I LIMD+ + + V +G+ +M Sbjct: 161 DENLSNILFQKDKTLGDDRKNESNKNSATVSLSSDEMSNIALIMDVKLPVKVRIGKKKML 220 Query: 75 IKELLRLTQGSVVALDGLAGEPLDILINGYLIAQGEVVVVADKYGVRITDIITPSERMRR 134 +K++L + GSV+ L+ LA +PLDIL++ +IA+GEVV+V +GV+IT I T ER+ + Sbjct: 221 LKDVLNMDIGSVIELNQLANDPLDILVDDNVIAEGEVVIVDGNFGVQITSIGTKRERLNQ 280 Query: 135 LS 136 L Sbjct: 281 LK 282 >UniRef50_Q04RL4 Endoflagellar motor switch protein n=6 Tax=Leptospira RepID=Q04RL4_LEPBJ Length = 174 Score = 104 bits (259), Expect = 1e-21, Method: Composition-based stats. Identities = 41/101 (40%), Positives = 63/101 (62%) Query: 32 KSAAETVFQQFGGGDVSGTLQDIDLIMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDG 91 S + + S +++L+MD+ + LTVELGRT M IK++ L +G VV LD Sbjct: 74 PSPTPSAPRSATRQSASTQSTNLNLLMDVNLALTVELGRTNMFIKDVNGLNEGIVVELDK 133 Query: 92 LAGEPLDILINGYLIAQGEVVVVADKYGVRITDIITPSERM 132 GE LDIL NG+L+ +G++V + D YG++IT+I+ S R+ Sbjct: 134 NVGEDLDILANGHLVGRGKLVAMDDFYGIQITEIVDQSRRL 174 >UniRef50_D1BCL8 Flagellar motor switch protein FliN n=1 Tax=Sanguibacter keddieii DSM 10542 RepID=D1BCL8_SANKS Length = 247 Score = 103 bits (258), Expect = 1e-21, Method: Composition-based stats. Identities = 34/102 (33%), Positives = 61/102 (59%) Query: 29 TSSKSAAETVFQQFGGGDVSGTLQDIDLIMDIPVKLTVELGRTRMTIKELLRLTQGSVVA 88 G + ++ L+ D+ + L+ E+GR ++ ++++L L G+V+ Sbjct: 143 ADQDVVPAAQAGAAGTSKGASVGDNLRLLYDVEMTLSAEIGRAKLPVRQVLELVPGAVIE 202 Query: 89 LDGLAGEPLDILINGYLIAQGEVVVVADKYGVRITDIITPSE 130 LD +AG P D+++NG LIA+GEVVV+ + YG+RIT+I+ +E Sbjct: 203 LDRVAGSPADLMVNGRLIARGEVVVIDEDYGLRITEIVDLAE 244 >UniRef50_B8HEJ4 Flagellar motor switch protein FliN n=1 Tax=Arthrobacter chlorophenolicus A6 RepID=B8HEJ4_ARTCA Length = 238 Score = 103 bits (258), Expect = 1e-21, Method: Composition-based stats. Identities = 42/91 (46%), Positives = 59/91 (64%) Query: 43 GGGDVSGTLQDIDLIMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILIN 102 G + + + LI ++ + LTVE+GRTRM++++ L L G V+ LD AG P D+L+N Sbjct: 148 GAHNDASVPARLSLISNVEMSLTVEIGRTRMSVRDALALEPGKVIELDRSAGAPADVLLN 207 Query: 103 GYLIAQGEVVVVADKYGVRITDIITPSERMR 133 G LIA GEVVVV Y VRIT I+ +E +R Sbjct: 208 GRLIAHGEVVVVDQDYAVRITRILDTAEGLR 238 >UniRef50_Q2RKD7 Flagellar motor switch FliN n=1 Tax=Moorella thermoacetica ATCC 39073 RepID=Q2RKD7_MOOTA Length = 124 Score = 103 bits (258), Expect = 1e-21, Method: Composition-based stats. Identities = 44/117 (37%), Positives = 64/117 (54%) Query: 14 AMDDLWAEALSEQKSTSSKSAAETVFQQFGGGDVSGTLQDIDLIMDIPVKLTVELGRTRM 73 +++ + + + F G D I D+P++L ELGRTRM Sbjct: 4 TEEEIQKLLQAMEAGEDQPRVEKARFAPLQPAPAPGVTADFKRIADVPLRLKAELGRTRM 63 Query: 74 TIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQGEVVVVADKYGVRITDIITPSE 130 T+KE+L L GSV+ LD LAGEP+D+L+N +A+GEVVV+ D +GVRI + E Sbjct: 64 TVKEILDLKDGSVIVLDKLAGEPVDLLVNDIPLAKGEVVVINDAFGVRINSLAAVEE 120 >UniRef50_Q7ULU7 Flagellar motor switch protein fliN n=1 Tax=Rhodopirellula baltica RepID=Q7ULU7_RHOBA Length = 141 Score = 103 bits (258), Expect = 1e-21, Method: Composition-based stats. Identities = 45/110 (40%), Positives = 70/110 (63%) Query: 20 AEALSEQKSTSSKSAAETVFQQFGGGDVSGTLQDIDLIMDIPVKLTVELGRTRMTIKELL 79 A A +++ST + D+DL+ ++ + L +ELGRT+M ++E+L Sbjct: 31 AAATGDKESTERDVPRPFALGDLSPNSLGEAAHDVDLLGEVEMDLRIELGRTQMRLEEVL 90 Query: 80 RLTQGSVVALDGLAGEPLDILINGYLIAQGEVVVVADKYGVRITDIITPS 129 RL GSVVALD LAG+P+DI +NG LIA+GEV+V+ D + VR+T+++ S Sbjct: 91 RLRAGSVVALDKLAGDPVDIYVNGRLIARGEVLVMNDNFCVRVTELVGAS 140 >UniRef50_C2BUL2 Flagellar motor switch protein FliN n=1 Tax=Mobiluncus curtisii ATCC 43063 RepID=C2BUL2_9ACTO Length = 250 Score = 103 bits (257), Expect = 2e-21, Method: Composition-based stats. Identities = 34/93 (36%), Positives = 62/93 (66%) Query: 42 FGGGDVSGTLQDIDLIMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILI 101 + + L+ D+ + LT E+GRT++ + ++L L+ GSV+ LD AG D+++ Sbjct: 155 QSTATPEQRAESMKLLYDVEMTLTAEIGRTKLAVHDVLDLSPGSVIELDRSAGSAADVMV 214 Query: 102 NGYLIAQGEVVVVADKYGVRITDIITPSERMRR 134 NG LIA+GE+VVV ++YG+RIT+I++ +++ + Sbjct: 215 NGRLIARGEIVVVDEEYGIRITEIVSLADQQNQ 247 >UniRef50_UPI0001C312B0 flagellar motor switch protein FliN n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C312B0 Length = 130 Score = 103 bits (256), Expect = 3e-21, Method: Composition-based stats. Identities = 40/99 (40%), Positives = 61/99 (61%) Query: 36 ETVFQQFGGGDVSGTLQDIDLIMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGE 95 + D+ + D+PV+L VE+GRTRMT+ E L L GS+V L+ +AGE Sbjct: 8 PAFDRPTAANGSHTGQNDLGRLSDVPVELAVEIGRTRMTVGETLELRPGSIVVLNRMAGE 67 Query: 96 PLDILINGYLIAQGEVVVVADKYGVRITDIITPSERMRR 134 P+D+L+NG IA GEVVV+ +++G+RITD++ + Sbjct: 68 PVDLLVNGTPIAHGEVVVIDEEFGLRITDVLGAPAGEQN 106 >UniRef50_Q2RZE3 Possible flagellar motor switch FliN n=1 Tax=Salinibacter ruber DSM 13855 RepID=Q2RZE3_SALRD Length = 250 Score = 102 bits (255), Expect = 3e-21, Method: Composition-based stats. Identities = 45/131 (34%), Positives = 73/131 (55%), Gaps = 3/131 (2%) Query: 8 ADDNNGAMDDLWAEALSEQKSTSS-KSAAETVFQQFGGGDVSGTLQD--IDLIMDIPVKL 64 AD ++GA A S S + F + G ++SG L+ D+ +++ Sbjct: 119 ADQSSGASQPAGGGAPSSSADESDGVEVSPAAFSELGDEEISGDGDSGTFKLLADVDLEV 178 Query: 65 TVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQGEVVVVADKYGVRITD 124 VELGR + + ++L+LT GSVV L+ + GEPL + NG LIA+GE VV+ +++GVRIT+ Sbjct: 179 RVELGRRELPLADVLKLTTGSVVELEKMVGEPLSVYANGRLIAEGEAVVIDEQFGVRITN 238 Query: 125 IITPSERMRRL 135 + + R + Sbjct: 239 LASEGHREKAF 249 >UniRef50_Q1Q6T3 Strong similar to flagellar motor switch protein FliN n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1Q6T3_9BACT Length = 120 Score = 102 bits (254), Expect = 4e-21, Method: Composition-based stats. Identities = 43/113 (38%), Positives = 75/113 (66%) Query: 24 SEQKSTSSKSAAETVFQQFGGGDVSGTLQDIDLIMDIPVKLTVELGRTRMTIKELLRLTQ 83 Q + S ++ + ++ + ++DLI+D+ V ++VELGR M IK++L L+Q Sbjct: 8 DAQPTIESVEFSQLIPEEMDSQKGGEGMPNLDLILDVTVPVSVELGRANMLIKDILALSQ 67 Query: 84 GSVVALDGLAGEPLDILINGYLIAQGEVVVVADKYGVRITDIITPSERMRRLS 136 GS+V L+ +AG P+++L+ G L+A+GEVVVV +++G++IT I P +R+R L Sbjct: 68 GSIVELEKVAGTPVELLVRGKLLARGEVVVVEERFGLKITAICGPQDRVRNLG 120 >UniRef50_A8RWD0 Putative uncharacterized protein n=3 Tax=Clostridiales RepID=A8RWD0_9CLOT Length = 368 Score = 102 bits (254), Expect = 4e-21, Method: Composition-based stats. Identities = 36/92 (39%), Positives = 60/92 (65%) Query: 41 QFGGGDVSGTLQDIDLIMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDIL 100 ++ LIMD+P+ ++VE+G+TR +K++L + G+VV LD + P+DI+ Sbjct: 273 PGSTLQNQSMNGNLSLIMDVPLNVSVEIGKTRRRLKDVLNFSNGTVVELDKQSDAPVDII 332 Query: 101 INGYLIAQGEVVVVADKYGVRITDIITPSERM 132 +NG LIA+GEVVV+ D +GVRI++I+ + Sbjct: 333 VNGQLIARGEVVVIDDNFGVRISEIVNTRSII 364 >UniRef50_D0MGA9 Flagellar motor switch protein FliN n=1 Tax=Rhodothermus marinus DSM 4252 RepID=D0MGA9_RHOM4 Length = 293 Score = 102 bits (254), Expect = 4e-21, Method: Composition-based stats. Identities = 41/130 (31%), Positives = 70/130 (53%), Gaps = 2/130 (1%) Query: 7 PADDNNGAMDDLWAEALSEQKSTSSKSAAETVFQQFGGGD--VSGTLQDIDLIMDIPVKL 64 P + ++ F + G G +++L+ D+ +++ Sbjct: 161 PPSVTQQPTSRAPKATAAGAAEQAAVEVRPASFGELGPERIGDGGVKGNLELLADVELEI 220 Query: 65 TVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQGEVVVVADKYGVRITD 124 VELGR R+ + ++LRLT GS++ L+ L GEPL+I NG LIA+GE VV+ +++GVRIT Sbjct: 221 VVELGRRRLPLADVLRLTTGSIIELEKLVGEPLEIYANGRLIAEGEAVVIDEQFGVRITS 280 Query: 125 IITPSERMRR 134 ++T S + + Sbjct: 281 LVTGSRQREK 290 >UniRef50_D1B0L6 Flagellar motor switch protein FliN n=1 Tax=Sulfurospirillum deleyianum DSM 6946 RepID=D1B0L6_SULD5 Length = 286 Score = 101 bits (253), Expect = 5e-21, Method: Composition-based stats. Identities = 39/127 (30%), Positives = 67/127 (52%), Gaps = 8/127 (6%) Query: 10 DNNGAMDDLWAEALSEQKSTSSKSAAETVFQQFGGGDVSGTLQDIDLIMDIPVKLTVELG 69 + D E++ E K ++ + +I+LI D+ + + V +G Sbjct: 168 VEDMPRMDTPKESIPESALIEPKKVVPSM--------SPEEISNIELIKDVRLPIRVRIG 219 Query: 70 RTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQGEVVVVADKYGVRITDIITPS 129 +M +K++L + GSV+ LD LA +PL+IL+ +IA GEVV+V +GV+I +I T Sbjct: 220 SKKMLLKDVLSMDIGSVIELDQLANDPLEILVGDKVIAMGEVVIVDGNFGVQIGEIGTKR 279 Query: 130 ERMRRLS 136 ER+ +L Sbjct: 280 ERLEKLR 286 >UniRef50_A4A5Y8 Flagellar motor switch protein fliN n=3 Tax=unclassified Gammaproteobacteria RepID=A4A5Y8_9GAMM Length = 117 Score = 101 bits (253), Expect = 5e-21, Method: Composition-based stats. Identities = 47/116 (40%), Positives = 76/116 (65%) Query: 21 EALSEQKSTSSKSAAETVFQQFGGGDVSGTLQDIDLIMDIPVKLTVELGRTRMTIKELLR 80 + +++ E +G D+DL+MD+ V L+VE+GRT++ IK+LL Sbjct: 2 SDEQATDAVAAEPPEELQSTAPPAAASAGGKIDLDLLMDVQVTLSVEIGRTKLPIKDLLA 61 Query: 81 LTQGSVVALDGLAGEPLDILINGYLIAQGEVVVVADKYGVRITDIITPSERMRRLS 136 L QGS+V+LD EPLD+++NG LIA+GEVV A ++G+R+ D+++PSER+++L Sbjct: 62 LNQGSIVSLDRGVKEPLDLMVNGTLIARGEVVESAGQFGLRLIDVVSPSERLKKLK 117 >UniRef50_A9HHD1 Flagellar motor switch protein FliN n=2 Tax=Rhodospirillales RepID=A9HHD1_GLUDA Length = 125 Score = 101 bits (252), Expect = 7e-21, Method: Composition-based stats. Identities = 45/123 (36%), Positives = 69/123 (56%), Gaps = 5/123 (4%) Query: 8 ADDNNGAMDDLWAEALSEQKSTSSKSAAETVFQQFGGGDVSGTLQDIDLIMDIPVKLTVE 67 +D ++D + A S + +A ++ GD SG ++ + DIPVK+T Sbjct: 3 TNDPGIGLEDFSSAAPSPAGA-EPDGSATAAGRKQKNGDGSGQ---MEAVYDIPVKITAV 58 Query: 68 LGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQGEVVVVAD-KYGVRITDII 126 +G M + +LL+L +G+VV LD GE +DI N LIA+GEVVVV D GV +T+II Sbjct: 59 IGSATMPVSQLLKLGRGAVVELDRKLGEAVDIYANNRLIARGEVVVVDDNHIGVTMTEII 118 Query: 127 TPS 129 + + Sbjct: 119 SSA 121 >UniRef50_C1F999 Putative flagellar motor switch protein FliN n=1 Tax=Acidobacterium capsulatum ATCC 51196 RepID=C1F999_ACIC5 Length = 248 Score = 101 bits (252), Expect = 8e-21, Method: Composition-based stats. Identities = 32/118 (27%), Positives = 65/118 (55%), Gaps = 3/118 (2%) Query: 22 ALSEQKSTSSKSAAETVFQQFGGGDVSGTLQ---DIDLIMDIPVKLTVELGRTRMTIKEL 78 LSE+ + + ++AA G + + ++DL++DI V ++ G + I+EL Sbjct: 128 ELSEKAAKAPETAARPAPASSGQPSAAASPASAANVDLLLDIEVDASLRFGSRELAIREL 187 Query: 79 LRLTQGSVVALDGLAGEPLDILINGYLIAQGEVVVVADKYGVRITDIITPSERMRRLS 136 L G V+ LD +P+D+++ ++A+GEVV+V +G+R+T++ P + + + Sbjct: 188 LETGPGDVLELDRHITDPVDLVVGDKIVARGEVVLVNGNFGLRVTEVAEPKKCLESVR 245 >UniRef50_C0GJF0 CheC, inhibitor of MCP methylation / FliN fusion protein n=1 Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GJF0_9FIRM Length = 541 Score = 100 bits (250), Expect = 1e-20, Method: Composition-based stats. Identities = 39/109 (35%), Positives = 61/109 (55%), Gaps = 2/109 (1%) Query: 25 EQKSTSSKSAAETVFQQFGGGDVSGTLQ--DIDLIMDIPVKLTVELGRTRMTIKELLRLT 82 E + + Q+ + +DLI DIPV++T LGR ++ +KEL+ Sbjct: 432 EDVEPVMSTEPQDWLQESSPESTLPEERGLQLDLIRDIPVEITGLLGRRKLPLKELMAAK 491 Query: 83 QGSVVALDGLAGEPLDILINGYLIAQGEVVVVADKYGVRITDIITPSER 131 GSVV L A P+DIL NG L+A+GEVV +++G++IT+I+ +R Sbjct: 492 AGSVVELSCPADAPVDILANGKLVARGEVVHYNERFGIKITEIMQDWKR 540 >UniRef50_C1ZEF0 Flagellar motor switch protein FliN n=1 Tax=Planctomyces limnophilus DSM 3776 RepID=C1ZEF0_PLALI Length = 193 Score = 100 bits (250), Expect = 1e-20, Method: Composition-based stats. Identities = 47/135 (34%), Positives = 79/135 (58%), Gaps = 10/135 (7%) Query: 5 NNPADDNNGAMDDLWAEALSEQ-------KSTSSKSAAETVFQQFGGG---DVSGTLQDI 54 N A+ + + A ALSE+ ++ A F++FG + + + Sbjct: 58 NTSAEQSLRQAEQQLAAALSEELPPRNMRGLPPGEAPARFEFEEFGTPFPTRAAAPVFPL 117 Query: 55 DLIMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQGEVVVV 114 D + D+ + + +ELGRT + I E+++L +G+VV LD LAG+P+DIL+NG L+A+GEV+V+ Sbjct: 118 DALQDVELDIRIELGRTELLIDEVMQLREGAVVPLDKLAGDPVDILVNGKLLARGEVLVL 177 Query: 115 ADKYGVRITDIITPS 129 D + VRI +I+T Sbjct: 178 NDNFCVRIAEILTQD 192 >UniRef50_A6DBQ2 Flagellar motor switch protein n=1 Tax=Caminibacter mediatlanticus TB-2 RepID=A6DBQ2_9PROT Length = 269 Score = 100 bits (250), Expect = 1e-20, Method: Composition-based stats. Identities = 33/99 (33%), Positives = 59/99 (59%) Query: 39 FQQFGGGDVSGTLQDIDLIMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLD 98 + +D++MD+ ++L V +G+ M +K+++ + GS+V LD LA EPLD Sbjct: 170 ISESSHELNKEIPSQLDMLMDVKLQLRVRIGKKTMLLKDVISMDIGSIVELDQLANEPLD 229 Query: 99 ILINGYLIAQGEVVVVADKYGVRITDIITPSERMRRLSR 137 ILI I +GEVV+V +G++IT I + ++R+ + + Sbjct: 230 ILIEDKKIGEGEVVIVDGNFGIQITSIGSKADRLNSMKK 268 >UniRef50_C0QPC5 Flagellar motor switch protein FliN n=2 Tax=Aquificales RepID=C0QPC5_PERMH Length = 190 Score = 100 bits (249), Expect = 1e-20, Method: Composition-based stats. Identities = 41/122 (33%), Positives = 70/122 (57%) Query: 16 DDLWAEALSEQKSTSSKSAAETVFQQFGGGDVSGTLQDIDLIMDIPVKLTVELGRTRMTI 75 D EQ + + E + + +DL+MDIP++++VE+G T + + Sbjct: 66 DQEALAKEWEQMAEKKEEKPEEKPVERFEKPAGLEQEKLDLLMDIPLEVSVEIGSTHLPL 125 Query: 76 KELLRLTQGSVVALDGLAGEPLDILINGYLIAQGEVVVVADKYGVRITDIITPSERMRRL 135 +E+L+L ++V LD +P+D+ +NG LIA+GE+ V D +G++IT IIT ERM+ L Sbjct: 126 EEILKLNPNNIVELDKFINQPVDLKVNGKLIAKGELYTVEDHFGIKITSIITVQERMKLL 185 Query: 136 SR 137 + Sbjct: 186 TE 187 >UniRef50_Q17WT1 Flagellar motor switch protein n=8 Tax=Campylobacterales RepID=Q17WT1_HELAH Length = 283 Score = 100 bits (249), Expect = 2e-20, Method: Composition-based stats. Identities = 38/116 (32%), Positives = 70/116 (60%), Gaps = 2/116 (1%) Query: 21 EALSEQKSTSSKSAAETVFQQFGGGDVSGTLQDIDLIMDIPVKLTVELGRTRMTIKELLR 80 E E +K E Q ++ +++I +++D+ + + V +G+ +M +K+++ Sbjct: 169 ETKKEHNEEGTKVVREDKIQDASLENI--EIRNISMLLDVKLNVKVRIGQKKMILKDVVS 226 Query: 81 LTQGSVVALDGLAGEPLDILINGYLIAQGEVVVVADKYGVRITDIITPSERMRRLS 136 + GSVV LD L +PL+IL++ +IA+GEVV+V +G++ITDI T ER+ +L Sbjct: 227 MDIGSVVELDQLVNDPLEILVDDKVIAKGEVVIVDGNFGIQITDIGTKKERLEQLK 282 >UniRef50_B9L5V0 Flagellar protein FliY n=1 Tax=Nautilia profundicola AmH RepID=B9L5V0_NAUPA Length = 270 Score = 100 bits (249), Expect = 2e-20, Method: Composition-based stats. Identities = 35/108 (32%), Positives = 66/108 (61%) Query: 30 SSKSAAETVFQQFGGGDVSGTLQDIDLIMDIPVKLTVELGRTRMTIKELLRLTQGSVVAL 89 + + +E ++ G ++++++++DI ++L V +G M +K+++ + GS+V L Sbjct: 163 NPSTKSEGSSTPSKAVELKGEMKNLEMLLDIKLQLRVRIGSKIMLLKDVIGMDIGSIVEL 222 Query: 90 DGLAGEPLDILINGYLIAQGEVVVVADKYGVRITDIITPSERMRRLSR 137 + LA EPLDILI I +GEVV+V +G++IT I + ER+ L + Sbjct: 223 NQLAKEPLDILIEDKKIGEGEVVIVDGNFGIQITSIGSREERLNSLKK 270 >UniRef50_Q0EZ61 Flagellar protein n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0EZ61_9PROT Length = 98 Score = 99 bits (248), Expect = 2e-20, Method: Composition-based stats. Identities = 34/98 (34%), Positives = 56/98 (57%) Query: 39 FQQFGGGDVSGTLQDIDLIMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLD 98 +++ IM +P++++VELGR ++ + + RL +G V+ ++ A + Sbjct: 1 MSDTATATEHPQTANLEAIMHVPLEISVELGRIKLPLHTIARLNRGMVIEMNKEANAEVQ 60 Query: 99 ILINGYLIAQGEVVVVADKYGVRITDIITPSERMRRLS 136 IL NG + A+GEVV DK GVRIT+I+ S R+ LS Sbjct: 61 ILANGSIFAKGEVVSTGDKLGVRITEIVPASARISSLS 98 >UniRef50_A8UW94 Flagellar motor switch FliN n=1 Tax=Hydrogenivirga sp. 128-5-R1-1 RepID=A8UW94_9AQUI Length = 164 Score = 99 bits (248), Expect = 2e-20, Method: Composition-based stats. Identities = 39/101 (38%), Positives = 58/101 (57%) Query: 31 SKSAAETVFQQFGGGDVSGTLQDIDLIMDIPVKLTVELGRTRMTIKELLRLTQGSVVALD 90 A + +D +MDIP+ + V +G T + I+EL+ L GSV+ LD Sbjct: 51 PAEAPPQEQVAEKKVTERDITKLLDRLMDIPLNVEVVVGETVIQIRELINLGPGSVLELD 110 Query: 91 GLAGEPLDILINGYLIAQGEVVVVADKYGVRITDIITPSER 131 EP+DI +NG LIA+GE+VVV +K+GVRIT+I + + Sbjct: 111 RETTEPVDIKVNGKLIAKGELVVVGEKFGVRITEIYSEERK 151 >UniRef50_C1A552 Flagellar motor switch protein FliN n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1A552_GEMAT Length = 141 Score = 99.5 bits (247), Expect = 3e-20, Method: Composition-based stats. Identities = 41/110 (37%), Positives = 67/110 (60%) Query: 17 DLWAEALSEQKSTSSKSAAETVFQQFGGGDVSGTLQDIDLIMDIPVKLTVELGRTRMTIK 76 +L E+ ++ A F + T I +++D+ + +++ELGRT MT++ Sbjct: 20 GQPISSLKEETVAAAPQARAPQLTDFEQTMLGTTEVPIGMLLDLTLPVSIELGRTSMTVQ 79 Query: 77 ELLRLTQGSVVALDGLAGEPLDILINGYLIAQGEVVVVADKYGVRITDII 126 E+LRL +GSV+ LD LAGEP+DI + A+GEVVV+ + +GVRIT ++ Sbjct: 80 EILRLGRGSVIQLDRLAGEPIDIYVGDRRFAEGEVVVLGEHFGVRITRVL 129 >UniRef50_B9KJD9 Flagellar switch protein n=5 Tax=Rhodobacter sphaeroides RepID=B9KJD9_RHOSK Length = 98 Score = 99.5 bits (247), Expect = 3e-20, Method: Composition-based stats. Identities = 46/85 (54%), Positives = 67/85 (78%) Query: 51 LQDIDLIMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQGE 110 +++ L+ +I V+LTVE+GRT MTI++LLRL++GSVV LD LAG+PLD+L+NG IA+GE Sbjct: 14 AENLRLLENIGVRLTVEVGRTEMTIRDLLRLSEGSVVELDRLAGDPLDVLVNGTPIAKGE 73 Query: 111 VVVVADKYGVRITDIITPSERMRRL 135 VV+V +++G+R II P +R L Sbjct: 74 VVMVGERFGIRFGQIIEPEKRAESL 98 >UniRef50_B2USQ1 Flagellar motor switch protein FliY n=14 Tax=Helicobacter pylori RepID=B2USQ1_HELPS Length = 288 Score = 99.2 bits (246), Expect = 3e-20, Method: Composition-based stats. Identities = 33/95 (34%), Positives = 63/95 (66%) Query: 43 GGGDVSGTLQDIDLIMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILIN 102 + +++I +++D+ + + V +G+ +M +K+++ + GSVV LD L +PL+IL++ Sbjct: 194 DASLENIEIRNISMLLDVKLNVKVRIGQKKMILKDVVSMDIGSVVELDQLVNDPLEILVD 253 Query: 103 GYLIAQGEVVVVADKYGVRITDIITPSERMRRLSR 137 +IA+GEVV+V +G++ITDI T ER+ +L Sbjct: 254 DKVIAKGEVVIVDGNFGIQITDIGTKKERLEQLKH 288 >UniRef50_Q44903 Flagellar motor switch protein fliN n=21 Tax=Spirochaetales RepID=FLIN_BORBU Length = 113 Score = 99.2 bits (246), Expect = 4e-20, Method: Composition-based stats. Identities = 40/111 (36%), Positives = 65/111 (58%) Query: 19 WAEALSEQKSTSSKSAAETVFQQFGGGDVSGTLQDIDLIMDIPVKLTVELGRTRMTIKEL 78 + + + + L+MD+ ++LTVELGRT IK++ Sbjct: 1 MSVDEKSDNGEKPEIKGVKLPDLIDTLPEGVDPSNFGLLMDVSMQLTVELGRTERKIKDI 60 Query: 79 LRLTQGSVVALDGLAGEPLDILINGYLIAQGEVVVVADKYGVRITDIITPS 129 L +++G+++ LD LAGEP+DIL+NG ++A+GEVVV+ + +GVRIT+II Sbjct: 61 LGMSEGTIITLDKLAGEPVDILVNGKIVAKGEVVVIDENFGVRITEIIKTK 111 >UniRef50_C0C1N9 Putative uncharacterized protein n=1 Tax=Clostridium hylemonae DSM 15053 RepID=C0C1N9_9CLOT Length = 460 Score = 99.2 bits (246), Expect = 4e-20, Method: Composition-based stats. Identities = 44/132 (33%), Positives = 73/132 (55%), Gaps = 3/132 (2%) Query: 1 MSDMNNPADDNNGAMDDLWAEALSEQKSTSSKSAAETVFQ---QFGGGDVSGTLQDIDLI 57 M+ M + + Q + K V Q + + +++LI Sbjct: 324 MTQMMDLMRQQLEMQQVQLQQMKQTQAAGPKKIKVNPVSQPNLEQSAEETELQESNLELI 383 Query: 58 MDIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQGEVVVVADK 117 M +P++++VE+GRT+ +K++L L +GS+V LD LAGE +D+ +NG IAQG+VVVV D Sbjct: 384 MGVPLEVSVEIGRTKKLVKDVLELNKGSLVVLDKLAGEQVDLFVNGQCIAQGDVVVVDDN 443 Query: 118 YGVRITDIITPS 129 +G+RIT+I+ Sbjct: 444 FGIRITEILADE 455 >UniRef50_Q1GNY9 Flagellar motor switch FliN n=2 Tax=Sphingomonadaceae RepID=Q1GNY9_SPHAL Length = 111 Score = 98.8 bits (245), Expect = 5e-20, Method: Composition-based stats. Identities = 35/108 (32%), Positives = 61/108 (56%) Query: 30 SSKSAAETVFQQFGGGDVSGTLQDIDLIMDIPVKLTVELGRTRMTIKELLRLTQGSVVAL 89 + + A + + DL+ + ++++VE+G T MT+ ELL L +GSV+ L Sbjct: 2 TDVADAPKAARADRRDKSIAAAPNFDLLAGVSLRVSVEVGSTSMTLAELLALGEGSVIEL 61 Query: 90 DGLAGEPLDILINGYLIAQGEVVVVADKYGVRITDIITPSERMRRLSR 137 D A + LDI NG LIA+GE+V V +YG+++ +++ P+ + R Sbjct: 62 DRAATDLLDIYANGTLIAKGEIVSVDGRYGIQVAEVVAPARGLEGFER 109 >UniRef50_Q4JMS2 Predicted flagellar motor switch protein n=3 Tax=Bacteria RepID=Q4JMS2_9BACT Length = 110 Score = 98.4 bits (244), Expect = 6e-20, Method: Composition-based stats. Identities = 47/113 (41%), Positives = 78/113 (69%), Gaps = 3/113 (2%) Query: 23 LSEQKSTSSKSAAETVFQQFGGGDVSGTLQDIDLIMDIPVKLTVELGRTRMTIKELLRLT 82 +SE+ + +A ET+ + + +++ L+ +I V LTVE+G+ + I++LLRL Sbjct: 1 MSEETELAEDAATETMDAE---TAARVSAENMRLLENIDVALTVEVGKAEIKIRDLLRLN 57 Query: 83 QGSVVALDGLAGEPLDILINGYLIAQGEVVVVADKYGVRITDIITPSERMRRL 135 +GSV+ LD LAG+PLDIL NG +IA+GEVV+V +++G+R T+I+ P+ RM + Sbjct: 58 EGSVIELDRLAGDPLDILANGTMIAKGEVVMVGERFGIRFTEIVDPAARMESV 110 >UniRef50_A1UTV7 Flagellar motor switch protein fliY n=35 Tax=Rhizobiales RepID=A1UTV7_BARBK Length = 139 Score = 98.4 bits (244), Expect = 6e-20, Method: Composition-based stats. Identities = 32/92 (34%), Positives = 58/92 (63%), Gaps = 3/92 (3%) Query: 40 QQFGGGDVSGTLQDIDLIMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDI 99 + + + +L+M IPV++ + LG T M + L+ L +GSV+ L+ G+P+DI Sbjct: 48 SSKTQENTNDASNNTELVMSIPVEVQIVLGSTTMPVANLMNLGRGSVITLNKQIGDPIDI 107 Query: 100 LINGYLIAQGEVVVVAD---KYGVRITDIITP 128 ++NG +IA+GEV+V+ D ++GV +T++I Sbjct: 108 VVNGRIIARGEVIVLEDDSSRFGVSLTEVIDK 139 >UniRef50_A1QZ73 Flagellar motor switch protein FliN n=7 Tax=Spirochaetaceae RepID=A1QZ73_BORT9 Length = 114 Score = 98.4 bits (244), Expect = 6e-20, Method: Composition-based stats. Identities = 41/109 (37%), Positives = 68/109 (62%) Query: 18 LWAEALSEQKSTSSKSAAETVFQQFGGGDVSGTLQDIDLIMDIPVKLTVELGRTRMTIKE 77 + + S+ + + + L+MD+ +++TVELGRT IK+ Sbjct: 1 MAIDDKSDIGEEKPEIKGVKLPDLIDTLPEGVDPSNFGLLMDVSMQVTVELGRTERKIKD 60 Query: 78 LLRLTQGSVVALDGLAGEPLDILINGYLIAQGEVVVVADKYGVRITDII 126 +L +++G+++ LD LAGEP+DIL+NG +IA+GEVVV+ + +GVRIT+II Sbjct: 61 ILGMSEGTIITLDKLAGEPVDILVNGKVIAKGEVVVIDENFGVRITEII 109 >UniRef50_C6WJP8 Flagellar motor switch protein FliN n=1 Tax=Actinosynnema mirum DSM 43827 RepID=C6WJP8_ACTMD Length = 250 Score = 98.4 bits (244), Expect = 7e-20, Method: Composition-based stats. Identities = 38/77 (49%), Positives = 61/77 (79%) Query: 54 IDLIMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQGEVVV 113 ++L+ + +++T ELGRTR+T++ELL L+ G+V+ LD AG P D+L+NG LIA+GEVVV Sbjct: 168 LELLHGVEMEVTAELGRTRLTVRELLSLSNGAVIELDRAAGSPADLLVNGRLIARGEVVV 227 Query: 114 VADKYGVRITDIITPSE 130 + + +G+R+T+II P + Sbjct: 228 IDENFGIRVTEIIKPGD 244 >UniRef50_B1LV08 Flagellar motor switch protein FliN n=1 Tax=Methylobacterium radiotolerans JCM 2831 RepID=B1LV08_METRJ Length = 110 Score = 98.0 bits (243), Expect = 9e-20, Method: Composition-based stats. Identities = 34/87 (39%), Positives = 53/87 (60%) Query: 43 GGGDVSGTLQDIDLIMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILIN 102 T D++ + D+PV ++ LG RM I +LLRL G+V+ LD GE +D+ +N Sbjct: 24 DAPTTPKTAADLEQLFDVPVMVSAVLGSARMPIGDLLRLAPGAVLELDRKVGEAIDVFVN 83 Query: 103 GYLIAQGEVVVVADKYGVRITDIITPS 129 L+A+GEVV+V D+ GV +T+I+ Sbjct: 84 NRLVARGEVVLVEDRLGVTMTEIVKGE 110 >UniRef50_D2S982 Flagellar motor switch protein FliN n=1 Tax=Geodermatophilus obscurus DSM 43160 RepID=D2S982_9ACTO Length = 249 Score = 97.6 bits (242), Expect = 1e-19, Method: Composition-based stats. Identities = 46/124 (37%), Positives = 70/124 (56%), Gaps = 2/124 (1%) Query: 8 ADDNNGAMDDLWAEALSEQKS--TSSKSAAETVFQQFGGGDVSGTLQDIDLIMDIPVKLT 65 +D + AMD L + + + + Q +DL+ + +++T Sbjct: 116 TEDPDTAMDGLRDKGMFVAVPLLAGGGTVEAVLALQVTLPQARTQRGSLDLLRHVAMEVT 175 Query: 66 VELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQGEVVVVADKYGVRITDI 125 VE+GRTRMT+ ELL L G VV LD A P D+L+NG LIA+GEVVVV + +G+RI++I Sbjct: 176 VEIGRTRMTVGELLSLHPGEVVELDRAASAPADLLVNGTLIARGEVVVVDEDFGLRISEI 235 Query: 126 ITPS 129 +T + Sbjct: 236 VTDA 239 >UniRef50_C6NYG7 Flagellar motor switch protein FliN n=1 Tax=Acidithiobacillus caldus ATCC 51756 RepID=C6NYG7_9GAMM Length = 120 Score = 97.6 bits (242), Expect = 1e-19, Method: Composition-based stats. Identities = 38/116 (32%), Positives = 67/116 (57%), Gaps = 2/116 (1%) Query: 24 SEQKSTSSKSAAETVFQQFGGGDV-SGTLQDIDLIMDIPVKLTVELGRTRMTIKELLRLT 82 S +T+ + + +DL++++P++++VELGRTRM K +L+L+ Sbjct: 4 STDDATNPLPIEHFDSSDETNEKLLTPGSPSVDLLVNVPMRISVELGRTRMPFKNILQLS 63 Query: 83 QGSVVALDGLAGEPLDILINGYLIAQGEVVVVA-DKYGVRITDIITPSERMRRLSR 137 QGSV+ L+ GEPL I ING + A GE V+V +++GVR+T ++ + ++ Sbjct: 64 QGSVIELNRAVGEPLTIYINGEIFAYGEAVLVNQERFGVRLTALVNKEDLIQNPRE 119 >UniRef50_Q03593 Flagellar motor switch protein fliN n=21 Tax=Alphaproteobacteria RepID=FLIN_CAUCR Length = 110 Score = 97.2 bits (241), Expect = 1e-19, Method: Composition-based stats. Identities = 37/108 (34%), Positives = 62/108 (57%) Query: 23 LSEQKSTSSKSAAETVFQQFGGGDVSGTLQDIDLIMDIPVKLTVELGRTRMTIKELLRLT 82 ++E T + + + T D+ + D+PV ++ LGR M++ +LL+L Sbjct: 1 MAEDNLTLDEFGGAMLASEAPIELSDKTAADLAPVFDVPVNISAVLGRANMSVAQLLQLG 60 Query: 83 QGSVVALDGLAGEPLDILINGYLIAQGEVVVVADKYGVRITDIITPSE 130 QGS++ LD GE +DI +N L+A+GEVVVV ++ GV +T+II + Sbjct: 61 QGSILELDRKVGEAIDIYVNNRLVARGEVVVVDERLGVTMTEIIKDGD 108 >UniRef50_Q89AZ3 Flagellar motor switch protein fliN n=1 Tax=Buchnera aphidicola (Baizongia pistaciae) RepID=FLIN_BUCBP Length = 134 Score = 97.2 bits (241), Expect = 1e-19, Method: Composition-based stats. Identities = 48/114 (42%), Positives = 70/114 (61%), Gaps = 3/114 (2%) Query: 16 DDLWAEALSEQKSTSSKSAAETVFQQFGGGDVSGTLQDIDLIMDIPVKLTVELGRTRMTI 75 +D+ E K SK+ + D+S + IMD+PV LT+E+G ++TI Sbjct: 19 EDIKKSCEIEDKIFHSKTVNDVDLNLNSKNDIS---SKMKFIMDVPVHLTIEVGTVKITI 75 Query: 76 KELLRLTQGSVVALDGLAGEPLDILINGYLIAQGEVVVVADKYGVRITDIITPS 129 K+LL L S++ LD AG+PL+IL+NGY+IA GE+VV +KYG+RI +II S Sbjct: 76 KDLLELRSKSILVLDKHAGDPLNILVNGYVIATGELVVTENKYGIRIINIIDNS 129 >UniRef50_C7M222 Flagellar motor switch protein FliN n=1 Tax=Acidimicrobium ferrooxidans DSM 10331 RepID=C7M222_ACIFD Length = 95 Score = 96.8 bits (240), Expect = 2e-19, Method: Composition-based stats. Identities = 40/86 (46%), Positives = 62/86 (72%) Query: 45 GDVSGTLQDIDLIMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGY 104 +V T ++ ++ ++ ++L+VELGR RM ++ LL LT G V+ LD A P+D+L+NG Sbjct: 2 PEVPETAANLAVLRNVELELSVELGRARMPVRALLALTSGDVIELDRHANAPVDVLVNGT 61 Query: 105 LIAQGEVVVVADKYGVRITDIITPSE 130 L+A+GEVVVV D++GVRI +II+ E Sbjct: 62 LVAKGEVVVVDDEFGVRILEIISSDE 87 >UniRef50_A5V6A7 Flagellar motor switch protein FliN n=4 Tax=Sphingomonadaceae RepID=A5V6A7_SPHWW Length = 107 Score = 96.8 bits (240), Expect = 2e-19, Method: Composition-based stats. Identities = 40/101 (39%), Positives = 61/101 (60%) Query: 37 TVFQQFGGGDVSGTLQDIDLIMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEP 96 + G ++ L+ DIP++L+VE+G T + + EL+ L GSVV LD A E Sbjct: 5 SDVPAVPGAAELAGRDNLRLLADIPLRLSVEVGSTSLRLAELMDLNAGSVVELDRQANEL 64 Query: 97 LDILINGYLIAQGEVVVVADKYGVRITDIITPSERMRRLSR 137 LDI++NG L+A+GEVV V K+G+R+ DI+ R+ + R Sbjct: 65 LDIMVNGTLVAKGEVVTVNGKFGIRVVDIVAADARLPGIER 105 >UniRef50_B1I5E1 Surface presentation of antigens (SPOA) protein n=1 Tax=Candidatus Desulforudis audaxviator MP104C RepID=B1I5E1_DESAP Length = 127 Score = 96.5 bits (239), Expect = 2e-19, Method: Composition-based stats. Identities = 39/118 (33%), Positives = 65/118 (55%) Query: 12 NGAMDDLWAEALSEQKSTSSKSAAETVFQQFGGGDVSGTLQDIDLIMDIPVKLTVELGRT 71 N + L + + K F+Q G + G ++ + D+ V ++ ELG+T Sbjct: 2 NEEEIRQFLSGLDREPGPTVKKVQFPRFEQAGTPGMPGVRISLEYLDDVEVDVSAELGQT 61 Query: 72 RMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQGEVVVVADKYGVRITDIITPS 129 MT++E L L +GSV+ LD AGE +D+++NG +A+GEV+V+ D + +RI I P Sbjct: 62 AMTVREFLSLHEGSVIGLDRAAGETIDVVVNGVKLARGEVLVINDLFVLRIHSIAHPQ 119 >UniRef50_D0I457 Flagellar motor switch protein FliN n=2 Tax=Vibrionaceae RepID=D0I457_VIBHO Length = 116 Score = 96.1 bits (238), Expect = 3e-19, Method: Composition-based stats. Identities = 34/96 (35%), Positives = 59/96 (61%) Query: 41 QFGGGDVSGTLQDIDLIMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDIL 100 + D+ I +IPV LT+E+ T + + +L+ + GSV+ LD L+GEP+D+ Sbjct: 20 PSSDAPAPVSSNDMRFIRNIPVNLTLEVASTELKVGDLMNINVGSVIELDKLSGEPMDVR 79 Query: 101 INGYLIAQGEVVVVADKYGVRITDIITPSERMRRLS 136 +NG L+ EVVVV +KYG+R+ +++ + +R L+ Sbjct: 80 VNGTLLGHAEVVVVNNKYGLRLVNVVDEKDMLRGLA 115 >UniRef50_C0AR55 Putative uncharacterized protein n=1 Tax=Proteus penneri ATCC 35198 RepID=C0AR55_9ENTR Length = 313 Score = 95.7 bits (237), Expect = 4e-19, Method: Composition-based stats. Identities = 27/130 (20%), Positives = 53/130 (40%), Gaps = 12/130 (9%) Query: 1 MSDMNNPADDNNGAMDDLWAEALSEQKSTSSKSAAETVFQQFGGGDVSGTLQDIDLIMDI 60 +++M P +++ + L E L + + V ++ I I Sbjct: 196 LNEMFYPDENDLDDLIQLQQENLDDHNDVT------------SPTLVHDNSVNLQSINSI 243 Query: 61 PVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQGEVVVVADKYGV 120 PV ++ L + I+++ L G + L A + + I +NG +A GE+V + D + V Sbjct: 244 PVTVSFLLASKTLLIEQIEALAPGDKIELPENAYQHIIIKVNGISVASGELVKIGDNFAV 303 Query: 121 RITDIITPSE 130 I + E Sbjct: 304 EIQRSFSAQE 313 >UniRef50_Q07SI0 Flagellar motor switch protein FliN n=7 Tax=Alphaproteobacteria RepID=Q07SI0_RHOP5 Length = 132 Score = 95.7 bits (237), Expect = 5e-19, Method: Composition-based stats. Identities = 38/129 (29%), Positives = 74/129 (57%), Gaps = 14/129 (10%) Query: 2 SDMNNPADDNNGAMDDLWAEALSEQKSTSSKSAAETVFQQFGGGDVSGTLQDIDLIMDIP 61 +D++N A ++ A + + ++++A ET L +++ I+ IP Sbjct: 7 TDLSNAAAEHASEPFKPEAASFGKLADLAARAAEET-----------SRLTNLEPILRIP 55 Query: 62 VKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQGEVVVVAD---KY 118 V + V LG M + +L++L +G+V+ LD GEP+++++NG ++A+G VVVV D ++ Sbjct: 56 VTVQVLLGSATMPVADLMKLGRGAVIPLDHRVGEPVEVVVNGRIVARGAVVVVEDENSRF 115 Query: 119 GVRITDIIT 127 GV +T+I+ Sbjct: 116 GVSLTEIVG 124 >UniRef50_Q2WA21 Flagellar motor switch/type III secretory pathway protein n=6 Tax=Rhodospirillales RepID=Q2WA21_MAGSA Length = 108 Score = 95.3 bits (236), Expect = 5e-19, Method: Composition-based stats. Identities = 36/105 (34%), Positives = 60/105 (57%) Query: 25 EQKSTSSKSAAETVFQQFGGGDVSGTLQDIDLIMDIPVKLTVELGRTRMTIKELLRLTQG 84 + + D+ + +D++ + DIPV+++ LG+ M + +LL+L +G Sbjct: 2 PDFELNDFKPEVEEQGRGDVPDMPRSARDLEAVYDIPVQVSAVLGKATMQVNQLLKLGRG 61 Query: 85 SVVALDGLAGEPLDILINGYLIAQGEVVVVADKYGVRITDIITPS 129 +VV LD GE +DI +N L+A+GEVVVV D+ GV +T+II Sbjct: 62 AVVELDRKVGEAIDIYVNNRLVARGEVVVVEDRLGVTMTEIIKTD 106 >UniRef50_B6R821 Flagellar motor switch protein FliN n=2 Tax=Rhodobacteraceae RepID=B6R821_9RHOB Length = 138 Score = 94.9 bits (235), Expect = 6e-19, Method: Composition-based stats. Identities = 42/134 (31%), Positives = 71/134 (52%), Gaps = 8/134 (5%) Query: 4 MNNPADDNNGAMDDLWAEALSEQKSTSS-----KSAAETVFQQFGGGDVSGTLQDIDLIM 58 M++ + ++ A+ W A SE + SA G +++D ++ Sbjct: 1 MSSSNEMSDEALALQWEAAASEAEMDMDMAAPAASAQPAASAPEKGVSDENVDRNLDAVL 60 Query: 59 DIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQGEVVVVAD-- 116 IPV + V LG M + LL+L +G+V+ LD GEP+DI++NG +A+GE+VVV D Sbjct: 61 GIPVDMQVVLGSATMPVASLLKLGRGAVIPLDHRVGEPVDIVVNGRTVARGEIVVVEDDN 120 Query: 117 -KYGVRITDIITPS 129 ++GV +T+I+ Sbjct: 121 SRFGVSLTEIVGAK 134 >UniRef50_A4SI07 Lateral flagellar motor switch protein, lfiN n=2 Tax=Aeromonas RepID=A4SI07_AERS4 Length = 125 Score = 94.9 bits (235), Expect = 8e-19, Method: Composition-based stats. Identities = 42/127 (33%), Positives = 72/127 (56%), Gaps = 11/127 (8%) Query: 1 MSDMNNPADDNNGAMDDLWAEALSEQKSTSSKSAAETVFQQFGGGDVSGTLQDIDLIMDI 60 M++ + +D L+ + +S + + + Q +D+ I Sbjct: 1 MNEHTMNDPLDLDGLDQLFGDDISMPSAADYMAPTSSSKQ-----------RDLSFFRQI 49 Query: 61 PVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQGEVVVVADKYGV 120 PVK+T+E+ T +++ EL+R+ +G+V+ LD LAGE LD+ +NG L+A+GEVVVV KYG+ Sbjct: 50 PVKVTLEVASTEVSLGELMRVEEGAVIELDKLAGETLDVRVNGRLLAKGEVVVVNGKYGL 109 Query: 121 RITDIIT 127 R+ D+I Sbjct: 110 RLVDVID 116 >UniRef50_Q1D9K8 Type III secretion system apparatus protein YscQ/HrcQ n=2 Tax=Cystobacterineae RepID=Q1D9K8_MYXXD Length = 467 Score = 94.5 bits (234), Expect = 9e-19, Method: Composition-based stats. Identities = 33/127 (25%), Positives = 67/127 (52%) Query: 1 MSDMNNPADDNNGAMDDLWAEALSEQKSTSSKSAAETVFQQFGGGDVSGTLQDIDLIMDI 60 ++D + G+ D+ AE E++ ++ + D DL+ D+ Sbjct: 341 ITDFVQGEPGHPGSADEASAEPGDEEEDFTNPELDVPPELEGAALDDVSKPDGSDLLGDV 400 Query: 61 PVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQGEVVVVADKYGV 120 P+++ VEL R +T ++++ L G V+ L+ GEP+++ +NG ++A+GE+V + + GV Sbjct: 401 PLQIAVELARVPVTAQQVVGLRTGQVLELNRGPGEPVELSVNGKVVARGELVELEGQLGV 460 Query: 121 RITDIIT 127 RI + + Sbjct: 461 RIITLAS 467 >UniRef50_C8W1G7 Surface presentation of antigens (SPOA) protein n=1 Tax=Desulfotomaculum acetoxidans DSM 771 RepID=C8W1G7_DESAS Length = 128 Score = 94.5 bits (234), Expect = 9e-19, Method: Composition-based stats. Identities = 35/102 (34%), Positives = 54/102 (52%) Query: 27 KSTSSKSAAETVFQQFGGGDVSGTLQDIDLIMDIPVKLTVELGRTRMTIKELLRLTQGSV 86 + + + F G I I D+PV +T ELG +T++E+L L+ G + Sbjct: 14 NKSEKTAVQKLRFTPLTPGGEQRIKTSIKHIEDVPVIVTAELGGAALTVREVLNLSPGML 73 Query: 87 VALDGLAGEPLDILINGYLIAQGEVVVVADKYGVRITDIITP 128 + LD LAGE + + IN +GEV+V+ D YG+RIT + P Sbjct: 74 IKLDVLAGELVTMSINNQKFGRGEVMVINDNYGIRITSVFKP 115 >UniRef50_B9JRN7 Flagellar motor switch protein FliN n=2 Tax=Rhizobiales RepID=B9JRN7_AGRVS Length = 220 Score = 94.5 bits (234), Expect = 9e-19, Method: Composition-based stats. Identities = 31/93 (33%), Positives = 59/93 (63%), Gaps = 3/93 (3%) Query: 40 QQFGGGDVSGTLQDIDLIMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDI 99 S ++DLIMDIP+ + + LG +RM + L+ L +G+++ALD GEP++I Sbjct: 126 APAHQAPGSALDSNLDLIMDIPIDVQIVLGSSRMPVSGLMNLEEGAIIALDKKIGEPVEI 185 Query: 100 LINGYLIAQGEVVVVAD---KYGVRITDIITPS 129 ++NG IA+GE+ V+ + ++GV++ ++++ Sbjct: 186 MVNGRRIARGEITVLENDDTRFGVKLIEVMSTK 218 >UniRef50_D1AZW0 Surface presentation of antigens (SPOA) protein n=3 Tax=Campylobacteraceae RepID=D1AZW0_SULD5 Length = 103 Score = 94.2 bits (233), Expect = 1e-18, Method: Composition-based stats. Identities = 28/83 (33%), Positives = 49/83 (59%) Query: 55 DLIMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQGEVVVV 114 + ++DI V ELG T +TI+ LL+L +GSV+ L+ AGE +++ IN + +GEV+V Sbjct: 18 ENLLDISVDFVAELGTTTLTIQRLLKLEKGSVIDLEKPAGESVELYINNKIFGKGEVMVY 77 Query: 115 ADKYGVRITDIITPSERMRRLSR 137 +RI +I+ ++ + Sbjct: 78 EKNLAIRINEILDSKTVIQYFKK 100 >UniRef50_A1T0L0 Surface presentation of antigens (SPOA) protein n=1 Tax=Psychromonas ingrahamii 37 RepID=A1T0L0_PSYIN Length = 120 Score = 93.8 bits (232), Expect = 1e-18, Method: Composition-based stats. Identities = 36/93 (38%), Positives = 50/93 (53%) Query: 37 TVFQQFGGGDVSGTLQDIDLIMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEP 96 + + + + DIPV +TVE+G +T+KELL + SV+ L G+ Sbjct: 26 NDISDAPPSSSAKKAKSLSFLNDIPVHVTVEVGAKTVTLKELLEIKNDSVLMLTKENGKA 85 Query: 97 LDILINGYLIAQGEVVVVADKYGVRITDIITPS 129 LDI +NG L A GEVVV YGV+ITDI+ Sbjct: 86 LDIKVNGKLFAYGEVVVANGHYGVKITDIVNKD 118 >UniRef50_A8EW52 Flagellar motor switch protein FliY n=1 Tax=Arcobacter butzleri RM4018 RepID=A8EW52_ARCB4 Length = 289 Score = 93.4 bits (231), Expect = 2e-18, Method: Composition-based stats. Identities = 31/112 (27%), Positives = 62/112 (55%) Query: 25 EQKSTSSKSAAETVFQQFGGGDVSGTLQDIDLIMDIPVKLTVELGRTRMTIKELLRLTQG 84 + + + V+ T ++++L+ ++ +KL+V LG + +K++LR G Sbjct: 177 PKVQVTPSTPVSNNTGSSNNSSVTPTSKNLELLYNVKLKLSVRLGTKIVLLKDILRWDVG 236 Query: 85 SVVALDGLAGEPLDILINGYLIAQGEVVVVADKYGVRITDIITPSERMRRLS 136 ++ L+ + EPL+ILING I +GE V+V K+G++I II ++ ++ Sbjct: 237 EIIELEQMVNEPLEILINGVKIGEGEAVIVEGKFGLKIKRIINEDFQIDKIG 288 >UniRef50_A6CER1 Flagellar motor switch protein fliN n=1 Tax=Planctomyces maris DSM 8797 RepID=A6CER1_9PLAN Length = 226 Score = 93.4 bits (231), Expect = 2e-18, Method: Composition-based stats. Identities = 37/93 (39%), Positives = 60/93 (64%), Gaps = 1/93 (1%) Query: 38 VFQQFGGG-DVSGTLQDIDLIMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEP 96 F F + + ++ + L +ELGRT + I+E+L++ +G VV LD LAG+P Sbjct: 133 EFPNFESMVSNPEEAMKLSSLQNVELDLCIELGRTELLIEEVLKMKEGVVVPLDKLAGDP 192 Query: 97 LDILINGYLIAQGEVVVVADKYGVRITDIITPS 129 +DIL+NG +IA+GEV+V+ D + VR+ +II+P Sbjct: 193 VDILVNGRIIARGEVLVLNDNFCVRVAEIISPE 225 >UniRef50_B1ZL53 Flagellar motor switch protein FliN n=6 Tax=Rhizobiales RepID=B1ZL53_METPB Length = 108 Score = 93.4 bits (231), Expect = 2e-18, Method: Composition-based stats. Identities = 36/101 (35%), Positives = 63/101 (62%), Gaps = 3/101 (2%) Query: 32 KSAAETVFQQFGGGDVSGTLQDIDLIMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDG 91 S+ G G +++D I+ IPV + V LG M + +L++L +G+VV LD Sbjct: 2 SSSPFPETDLAGNEPRVGDGRNLDSILRIPVLMQVVLGSATMPVADLMKLGRGAVVPLDH 61 Query: 92 LAGEPLDILINGYLIAQGEVVVVAD---KYGVRITDIITPS 129 GEP+D+++NG +IA+GE+V+V + ++GV +T+++ PS Sbjct: 62 RVGEPVDVMVNGRVIARGEIVIVEEDNSRFGVSLTEVVGPS 102 >UniRef50_A7H064 Flagellar motor switch protein FliN n=8 Tax=Epsilonproteobacteria RepID=A7H064_CAMC5 Length = 105 Score = 93.4 bits (231), Expect = 2e-18, Method: Composition-based stats. Identities = 29/86 (33%), Positives = 48/86 (55%) Query: 52 QDIDLIMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQGEV 111 + D +MDI V ELG T ++I ELL+ GSV+ L+ AGE +++ IN + +GEV Sbjct: 17 KSYDELMDISVDFIAELGTTTISINELLKFEAGSVIDLEKPAGESVELYINNRIFGKGEV 76 Query: 112 VVVADKYGVRITDIITPSERMRRLSR 137 +V +RI +I+ ++ + Sbjct: 77 MVYEKNLAIRINEILDSKSVIQYFKK 102 >UniRef50_A4THZ3 Flagellar switch protein n=26 Tax=Enterobacteriaceae RepID=A4THZ3_YERPP Length = 137 Score = 93.0 bits (230), Expect = 2e-18, Method: Composition-based stats. Identities = 41/127 (32%), Positives = 64/127 (50%), Gaps = 2/127 (1%) Query: 1 MSDMNNPADDNNGAMDDLWAEALSEQKSTSSKSAAETVF--QQFGGGDVSGTLQDIDLIM 58 M+D +++ L A+S + S + + + + + L Sbjct: 1 MTDQQIELNNDLDFTLALDESAISPTEHFDSVINSPEIINTPEKTATKTDEQKRKMSLFS 60 Query: 59 DIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQGEVVVVADKY 118 IPV LT+E+ + + ELL + SV+ LD LAGEPLDI +NG + Q EVVV+ +KY Sbjct: 61 RIPVTLTLEVASVEIPLSELLTVNNDSVIELDKLAGEPLDIRVNGIMFGQAEVVVINEKY 120 Query: 119 GVRITDI 125 G+RI +I Sbjct: 121 GLRIINI 127 >UniRef50_Q57259 Flagellar motor switch protein fliN n=2 Tax=Rhizobium/Agrobacterium group RepID=FLIN_AGRT5 Length = 179 Score = 93.0 bits (230), Expect = 3e-18, Method: Composition-based stats. Identities = 37/126 (29%), Positives = 69/126 (54%), Gaps = 3/126 (2%) Query: 8 ADDNNGAMDDLWAEALSEQKSTSSKSAAETVFQQFGGGDVSGTLQDIDLIMDIPVKLTVE 67 + D +DL A AA SG +++++IMDIP+ + + Sbjct: 53 STDEVSTDNDLSAFGGGAADFAMDDFAAAPQVAGVKAPLGSGLSENMEMIMDIPIDVQIV 112 Query: 68 LGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQGEVVVVAD---KYGVRITD 124 LG +RM + L+ L +G+ +ALD GEP++I++NG IA+GE+ V+ D ++GV++ + Sbjct: 113 LGTSRMLVSGLMSLEEGATIALDRKIGEPVEIMVNGRRIARGEITVLEDDDTRFGVKLIE 172 Query: 125 IITPSE 130 +++ + Sbjct: 173 VLSTRK 178 >UniRef50_A7K019 Type III secretion inner membrane protein YscQ n=13 Tax=Vibrionaceae RepID=A7K019_VIBSE Length = 322 Score = 92.6 bits (229), Expect = 4e-18, Method: Composition-based stats. Identities = 22/89 (24%), Positives = 47/89 (52%) Query: 39 FQQFGGGDVSGTLQDIDLIMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLD 98 ++ + T + + +PV+LT ++G +T+++L +L G V L+ +P+ Sbjct: 228 IEKETNMNDVNTSEMLTDHQQLPVELTFDIGHQTITLEQLNQLQPGYVFELNQPVSKPVT 287 Query: 99 ILINGYLIAQGEVVVVADKYGVRITDIIT 127 + NG +I + E+V V + GVR+ ++ Sbjct: 288 LRANGKIIGECELVNVNEHLGVRVLELFG 316 >UniRef50_B6QZA8 Flagellar motor switch protein n=1 Tax=Pseudovibrio sp. JE062 RepID=B6QZA8_9RHOB Length = 111 Score = 92.6 bits (229), Expect = 4e-18, Method: Composition-based stats. Identities = 37/90 (41%), Positives = 55/90 (61%) Query: 41 QFGGGDVSGTLQDIDLIMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDIL 100 GG +D++ + D+PV+L LG T+M + +LL L G V+ LD GE +D+ Sbjct: 22 DEDGGGGVKAAEDLEAVFDVPVQLAAVLGHTKMKVSDLLHLDTGIVMELDRKVGEAIDVY 81 Query: 101 INGYLIAQGEVVVVADKYGVRITDIITPSE 130 +N LIA+GEVV+V DK GV +T+II + Sbjct: 82 VNNRLIARGEVVLVEDKLGVTMTEIIKADK 111 >UniRef50_B8EL08 Flagellar motor switch protein FliN n=2 Tax=Beijerinckiaceae RepID=B8EL08_METSB Length = 110 Score = 92.2 bits (228), Expect = 5e-18, Method: Composition-based stats. Identities = 38/104 (36%), Positives = 63/104 (60%), Gaps = 3/104 (2%) Query: 28 STSSKSAAETVFQQFGGGDVSGTLQDIDLIMDIPVKLTVELGRTRMTIKELLRLTQGSVV 87 S + ETV + ++++ I+ IPV + V LG M + LL+L +G+V+ Sbjct: 2 SDAQIEVNETVGGGEEPPGRANVSRNLETILRIPVVVQVVLGSAVMPVSHLLKLGRGAVI 61 Query: 88 ALDGLAGEPLDILINGYLIAQGEVVVVAD---KYGVRITDIITP 128 LD GEP+D+++NG +IA+GE+VVV D ++GV +T+I+ P Sbjct: 62 PLDHRVGEPVDVVVNGRIIARGEIVVVEDDNSRFGVSLTEIVGP 105 >UniRef50_A5FYJ9 Flagellar motor switch protein FliN n=17 Tax=Alphaproteobacteria RepID=A5FYJ9_ACICJ Length = 132 Score = 92.2 bits (228), Expect = 5e-18, Method: Composition-based stats. Identities = 41/129 (31%), Positives = 71/129 (55%), Gaps = 11/129 (8%) Query: 2 SDMNNPADDNNGAMDDLWAEALSEQKSTSSKSAAETVFQQFGGGDVSGTLQDIDLIMDIP 61 S++ P + NG L L+ ++ ET +D++ + D+P Sbjct: 11 SEITTPTGEPNGNGQVLSDLPLAPVSRRTAGDGPETQRPS----------RDLEAVYDVP 60 Query: 62 VKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQGEVVVVAD-KYGV 120 V ++ LGR+ M + +LL+L +G+VV LD AG+P+DI +N LIA+GEVV++ + K G+ Sbjct: 61 VLVSAVLGRSTMQVSQLLKLGRGAVVELDRKAGDPIDIFVNNRLIARGEVVMLDETKLGI 120 Query: 121 RITDIITPS 129 +T+I+ Sbjct: 121 TMTEIVKSD 129 >UniRef50_C1ZEH8 Flagellar motor switch/type III secretory pathway protein n=1 Tax=Planctomyces limnophilus DSM 3776 RepID=C1ZEH8_PLALI Length = 396 Score = 91.8 bits (227), Expect = 5e-18, Method: Composition-based stats. Identities = 33/135 (24%), Positives = 58/135 (42%), Gaps = 1/135 (0%) Query: 1 MSDMNNPADDNNGAMDDLWAEALSEQKSTSSKSAAETVFQQFGGGDVSGTLQDIDLIMDI 60 + D + +DDL + +SAA Q+ + + + + Sbjct: 260 LPDSQTAVAPVDSPVDDLLSNYEGLAAQDPMESAAPLA-QETMPQQSVTSQLMLQRLSGV 318 Query: 61 PVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQGEVVVVADKYGV 120 V+L+V L RM + LL+L+ G++V + LDI I AQGE V + + +GV Sbjct: 319 RVQLSVRLAEKRMPLAALLQLSPGALVTFSKPCEDLLDIYIGNRQYAQGEAVKIGEHFGV 378 Query: 121 RITDIITPSERMRRL 135 ++ + P E+ L Sbjct: 379 KVNRLGPPPEKPSSL 393 >UniRef50_A6F9R7 Flagellar motor switch protein n=1 Tax=Moritella sp. PE36 RepID=A6F9R7_9GAMM Length = 122 Score = 91.8 bits (227), Expect = 6e-18, Method: Composition-based stats. Identities = 33/88 (37%), Positives = 55/88 (62%) Query: 40 QQFGGGDVSGTLQDIDLIMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDI 99 + +D+ +IP+ +T+E+ T++ I +L+ L+ G+V+ LD LA EPLD+ Sbjct: 27 SSLMTAENKPLKKDLSFFHNIPIDVTLEVASTKLVIGDLMMLSSGAVIELDKLADEPLDL 86 Query: 100 LINGYLIAQGEVVVVADKYGVRITDIIT 127 +NG L+A EVVVV KYGV++ D++ Sbjct: 87 KVNGQLLATAEVVVVNGKYGVKLIDVVD 114 >UniRef50_A5D0I4 Flagellar motor switch/type III secretory pathway protein n=1 Tax=Pelotomaculum thermopropionicum SI RepID=A5D0I4_PELTS Length = 126 Score = 91.8 bits (227), Expect = 6e-18, Method: Composition-based stats. Identities = 37/111 (33%), Positives = 63/111 (56%), Gaps = 5/111 (4%) Query: 27 KSTSSKSAAETVFQQFGGGDVSGTLQ-DIDLIMDIPVKLTVELGRTRMTIKELLRLTQGS 85 S+S + F ++ + + D+ ++++VELG+T M ++E+L L QGS Sbjct: 14 ASSSDADIKKVQFPPLTPVKGMDRVKTSMSHLEDVQIEISVELGQTVMKVREVLGLEQGS 73 Query: 86 VVALDGLAGEPLDILINGYLIAQGEVVVVADKYGVRITDIITPSERMRRLS 136 V+ LD GE +++++N A+GEVVV+ D +GVRIT I R++ L Sbjct: 74 VIRLDKAIGEAVEVVLNEQRFARGEVVVINDSFGVRITSI----NRVQNLK 120 >UniRef50_A6CBY5 Probable flagellar motor switch protein fliN n=1 Tax=Planctomyces maris DSM 8797 RepID=A6CBY5_9PLAN Length = 295 Score = 91.5 bits (226), Expect = 7e-18, Method: Composition-based stats. Identities = 23/116 (19%), Positives = 49/116 (42%) Query: 20 AEALSEQKSTSSKSAAETVFQQFGGGDVSGTLQDIDLIMDIPVKLTVELGRTRMTIKELL 79 S S + Q + ++ I +PV+ V+L ++ + +LL Sbjct: 177 EPEADPAPQPSPSSTPQATPQMVQATPANSNRNPLNRISKLPVQAIVKLASKKIEMNQLL 236 Query: 80 RLTQGSVVALDGLAGEPLDILINGYLIAQGEVVVVADKYGVRITDIITPSERMRRL 135 + GS++ D +PL++ IN + GE V + + +G++I + E ++ Sbjct: 237 SICPGSLITFDKPCEDPLELYINNQVYCLGEAVKIGEHFGLKIDRVGFKEEYESKI 292 >UniRef50_C0GJH0 Surface presentation of antigens (SPOA) protein n=1 Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GJH0_9FIRM Length = 150 Score = 91.5 bits (226), Expect = 7e-18, Method: Composition-based stats. Identities = 33/128 (25%), Positives = 59/128 (46%), Gaps = 4/128 (3%) Query: 2 SDMNNPADDNNGAMDDLWAEALSEQKSTSSKSAAETVFQQFGGGDVSGTLQDIDLIMDIP 61 D+ + E + ++ F +F + ++ +P Sbjct: 20 PDLADEVKQEKEGSQPKQEEP----PAAPAEEVERVEFPEFVQAPQGAKERGVNFFESVP 75 Query: 62 VKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQGEVVVVADKYGVR 121 V L +ELG +T++E+L L + S++ LD LAGE + +NG +A GEVVV+ D +G R Sbjct: 76 VTLDLELGAATLTVREILALQKDSIIRLDKLAGENAALCVNGKPLASGEVVVINDNFGFR 135 Query: 122 ITDIITPS 129 + ++ S Sbjct: 136 VAEVGGSS 143 >UniRef50_B6IQ95 Flagellar motor switch protein FliN n=1 Tax=Rhodospirillum centenum SW RepID=B6IQ95_RHOCS Length = 119 Score = 91.5 bits (226), Expect = 7e-18, Method: Composition-based stats. Identities = 33/87 (37%), Positives = 54/87 (62%), Gaps = 1/87 (1%) Query: 44 GGDVSGTLQDIDLIMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILING 103 + ++ I ++PV + V LGRT M + +LL+L +G+VV L+ GE +D+ +N Sbjct: 29 PEEPGQDRDELRAIFNVPVNVQVVLGRTTMPVSQLLKLGRGAVVELNRKVGEAVDVFVND 88 Query: 104 YLIAQGEVVVVAD-KYGVRITDIITPS 129 LIA+GEVV+V D + GV +T+I+ Sbjct: 89 RLIARGEVVIVDDGRLGVTMTEIVKAE 115 >UniRef50_Q3ADD4 Flagellar motor switch protein FliN n=1 Tax=Carboxydothermus hydrogenoformans Z-2901 RepID=Q3ADD4_CARHZ Length = 124 Score = 91.5 bits (226), Expect = 8e-18, Method: Composition-based stats. Identities = 29/87 (33%), Positives = 48/87 (55%) Query: 37 TVFQQFGGGDVSGTLQDIDLIMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEP 96 F + L+ +I +++ +G T +T+++LL L +G V+ LD G+ Sbjct: 23 PEFSPLEPVPTGQRKLPMSLLNNIKMEIVARMGTTELTVRQLLALKEGDVLELDKSIGDL 82 Query: 97 LDILINGYLIAQGEVVVVADKYGVRIT 123 +D+ I+G A GEVVV+ + YGVRIT Sbjct: 83 IDLFIDGRRFAVGEVVVINEMYGVRIT 109 >UniRef50_B6IW97 Flagellar motor switch protein FliN n=1 Tax=Rhodospirillum centenum SW RepID=B6IW97_RHOCS Length = 105 Score = 91.1 bits (225), Expect = 9e-18, Method: Composition-based stats. Identities = 34/89 (38%), Positives = 56/89 (62%) Query: 43 GGGDVSGTLQDIDLIMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILIN 102 SG + + I+ +PV+++V LGR RM I +LLRL VV L+ + GEP+D+ +N Sbjct: 6 SDAAESGETPERNSILSVPVQVSVRLGRRRMRISQLLRLGPSDVVDLERMVGEPVDLFVN 65 Query: 103 GYLIAQGEVVVVADKYGVRITDIITPSER 131 L+A+GE+VVV + G+ I +++ + R Sbjct: 66 DRLVARGELVVVDGRLGLTIVELMPQASR 94 >UniRef50_D1R7U0 Putative type III secretion system protein n=1 Tax=Parachlamydia acanthamoebae str. Hall's coccus RepID=D1R7U0_9CHLA Length = 462 Score = 91.1 bits (225), Expect = 1e-17, Method: Composition-based stats. Identities = 27/80 (33%), Positives = 51/80 (63%) Query: 46 DVSGTLQDIDLIMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYL 105 + Q I DIP+ +T E+GR +MT+K+L+ L G+++ L+ + +D+++NG Sbjct: 382 ASTANKQTAPSIDDIPLVITAEVGRIQMTVKKLVELQPGNLLELNVHPEDGIDLVVNGKR 441 Query: 106 IAQGEVVVVADKYGVRITDI 125 +A+GE++ + D GVR+ +I Sbjct: 442 VARGELLSIGDALGVRVLEI 461 Score = 39.1 bits (90), Expect = 0.041, Method: Composition-based stats. Identities = 14/58 (24%), Positives = 29/58 (50%), Gaps = 6/58 (10%) Query: 60 IPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEP------LDILINGYLIAQGEV 111 + V + +E G+T + E +L G ++ LD + +P + + ING +G++ Sbjct: 208 LEVVVHLEAGKTTLKAGEWKKLALGDLLILDSCSLKPGEDAGRVLLTINGKPFFRGKL 265 >UniRef50_A5KY22 Flagellar motor switch protein n=2 Tax=Vibrionales RepID=A5KY22_9GAMM Length = 127 Score = 90.7 bits (224), Expect = 1e-17, Method: Composition-based stats. Identities = 35/87 (40%), Positives = 49/87 (56%) Query: 45 GDVSGTLQDIDLIMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGY 104 G + +I L+ IPV +TVE+ R + + ELL L GSVV L+ G+P+DI ING Sbjct: 41 GADKEHVSNISLLKSIPVDITVEVARKTLILDELLNLKAGSVVMLEKHEGDPVDIKINGT 100 Query: 105 LIAQGEVVVVADKYGVRITDIITPSER 131 GE+V +YGVR+ II + Sbjct: 101 AFGTGEIVSKNGQYGVRLLSIIKKPSK 127 >UniRef50_Q0G104 Flagellar motor switch FliN protein:Surface presentation of antigens (SPOA) protein n=1 Tax=Fulvimarina pelagi HTCC2506 RepID=Q0G104_9RHIZ Length = 131 Score = 90.7 bits (224), Expect = 1e-17, Method: Composition-based stats. Identities = 39/132 (29%), Positives = 72/132 (54%), Gaps = 12/132 (9%) Query: 4 MNNPADDNNGAMDDLWAEALSEQKSTSSKSAAETVFQQFGGGDVSGTLQDIDLIMDIPVK 63 M +P D + ++ + E+ + D+DL++D+ V Sbjct: 1 MIDPNDPHGSEIEHSGQPYMDEEGGEEDDRRPDFR---------GADKMDLDLVLDVSVT 51 Query: 64 LTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQGEVVVV---ADKYGV 120 + V LG RM++ ELL+L +GS+V LD G+P+D+++NG +IA+GE+VV+ ++GV Sbjct: 52 MQVVLGSARMSVSELLKLNRGSIVKLDTKVGDPIDVVVNGRVIARGEIVVLDQDDQQFGV 111 Query: 121 RITDIITPSERM 132 +T++ TP ++ Sbjct: 112 TLTEVATPGSKL 123 >UniRef50_C6XFK8 Putative flagellar motor switch protein n=1 Tax=Candidatus Liberibacter asiaticus str. psy62 RepID=C6XFK8_LIBAP Length = 147 Score = 90.7 bits (224), Expect = 1e-17, Method: Composition-based stats. Identities = 39/129 (30%), Positives = 66/129 (51%), Gaps = 6/129 (4%) Query: 4 MNNPADDNNGAMDDLWAEALSEQKSTSSKSAAETVFQQFGGGDVSGTLQDIDLIMDIPVK 63 ++NP D N + +E L ++ + S + + + DLIM+IPVK Sbjct: 22 IDNPLQDTNVSSPTNNSEMLIQKNDVDNIS---EPISSDSNNILEKSTDNFDLIMNIPVK 78 Query: 64 LTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQGEVVVVAD---KYGV 120 + + LG M I L+ L++G V+ LD GE +DI IN IA+GE+ ++ + +GV Sbjct: 79 MQIILGSCCMQISNLVNLSKGDVITLDKRVGESVDITINNQKIAKGEITIMEEDDTHFGV 138 Query: 121 RITDIITPS 129 R+ +I+ Sbjct: 139 RVIEILNAQ 147 >UniRef50_P42713 Yop proteins translocation protein Q n=21 Tax=Yersinia RepID=YSCQ_YERPE Length = 307 Score = 90.7 bits (224), Expect = 1e-17, Method: Composition-based stats. Identities = 21/94 (22%), Positives = 41/94 (43%) Query: 34 AAETVFQQFGGGDVSGTLQDIDLIMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLA 93 + + F + + + +PV+++ E+GR + L L GS++ L Sbjct: 210 SNKLEFIGMSHESDELNPEPLTDLNQLPVQVSFEVGRQILDWHTLTSLEPGSLIDLTTPV 269 Query: 94 GEPLDILINGYLIAQGEVVVVADKYGVRITDIIT 127 + +L NG L+ G +V + + GVRI + Sbjct: 270 DGEVRLLANGRLLGHGRLVEIQGRLGVRIERLTE 303 >UniRef50_Q11LL6 Flagellar motor switch protein FliN n=3 Tax=Phyllobacteriaceae RepID=Q11LL6_MESSB Length = 121 Score = 90.3 bits (223), Expect = 2e-17, Method: Composition-based stats. Identities = 36/110 (32%), Positives = 62/110 (56%), Gaps = 3/110 (2%) Query: 19 WAEALSEQKSTSSKSAAETVFQQFGGGDVSGTLQDIDLIMDIPVKLTVELGRTRMTIKEL 78 + + T K+ E + + ++DIPV+L + LG MT+ EL Sbjct: 5 PSAVHKSEGGTLDKAIEEMRSALHEEAQPNMDAEKTGFLVDIPVELQIVLGSAEMTVSEL 64 Query: 79 LRLTQGSVVALDGLAGEPLDILINGYLIAQGEVVVVAD---KYGVRITDI 125 + L +GS V+LD GEP++I++NG LIA+GE+ ++ + ++GVR+T+I Sbjct: 65 MALQRGSTVSLDRRIGEPVEIMVNGRLIARGEITILENDPSRFGVRLTEI 114 >UniRef50_Q18D12 Putative flagellar motor switch protein n=3 Tax=Clostridium difficile RepID=Q18D12_CLOD6 Length = 124 Score = 90.3 bits (223), Expect = 2e-17, Method: Composition-based stats. Identities = 33/96 (34%), Positives = 63/96 (65%) Query: 40 QQFGGGDVSGTLQDIDLIMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDI 99 + +I I+D+ ++L+V +GRT+MT++++L L +GS++ LD LA + ++I Sbjct: 28 DELALDVSEVNRNNIQRILDLKLELSVVIGRTKMTLRDILNLHKGSLIELDTLADQDVEI 87 Query: 100 LINGYLIAQGEVVVVADKYGVRITDIITPSERMRRL 135 LI+ ++A G+VVVV +GV+IT I++ + ++ L Sbjct: 88 LIDNKVLAYGKVVVVDLNFGVKITSIVSEEDMVKSL 123 >UniRef50_A5P6I8 Flagellar motor switch protein n=1 Tax=Erythrobacter sp. SD-21 RepID=A5P6I8_9SPHN Length = 96 Score = 89.9 bits (222), Expect = 2e-17, Method: Composition-based stats. Identities = 35/74 (47%), Positives = 53/74 (71%) Query: 56 LIMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQGEVVVVA 115 LI DI V+LTVELGR M ++++L L + SV+ LD L EPLD+ +NG LIA+GEV+ Sbjct: 10 LIQDIDVRLTVELGRKSMRLRDVLALGESSVIELDRLTDEPLDMFVNGKLIARGEVIAQG 69 Query: 116 DKYGVRITDIITPS 129 +++ +R+ +I+ S Sbjct: 70 NRFAIRVLEIVGAS 83 >UniRef50_A1RF65 Flagellar motor switch protein FliN n=8 Tax=Shewanella RepID=A1RF65_SHESW Length = 128 Score = 89.9 bits (222), Expect = 2e-17, Method: Composition-based stats. Identities = 36/83 (43%), Positives = 55/83 (66%) Query: 43 GGGDVSGTLQDIDLIMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILIN 102 S L++ + +PV++T+EL M++ EL R+ +G V+ALD + GEPLDI +N Sbjct: 35 KQDTQSRKLKNNNFFQQLPVQVTLELASAEMSLGELNRMGEGDVIALDRMVGEPLDIRVN 94 Query: 103 GYLIAQGEVVVVADKYGVRITDI 125 G L+ +GEVV VA +YGVR+ +I Sbjct: 95 GALLGRGEVVEVAGRYGVRLLEI 117 >UniRef50_Q058C3 Flagellar motor switch protein, C-ring protein n=1 Tax=Buchnera aphidicola str. Cc (Cinara cedri) RepID=Q058C3_BUCCC Length = 134 Score = 89.9 bits (222), Expect = 2e-17, Method: Composition-based stats. Identities = 36/75 (48%), Positives = 53/75 (70%) Query: 53 DIDLIMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQGEVV 112 D + IPV LT+EL + ++TI+ELL+ +GS++ L+ +PL+I IN YLIA GE+V Sbjct: 56 DSSALSSIPVYLTIELSKKKITIQELLQFKKGSILELEDNINKPLNIFINNYLIAIGELV 115 Query: 113 VVADKYGVRITDIIT 127 V D YGV+IT ++T Sbjct: 116 VNNDCYGVQITKLLT 130 >UniRef50_C9PEF6 Flagellar motor switch protein FliN n=1 Tax=Vibrio furnissii CIP 102972 RepID=C9PEF6_VIBFU Length = 128 Score = 89.9 bits (222), Expect = 2e-17, Method: Composition-based stats. Identities = 35/117 (29%), Positives = 56/117 (47%) Query: 13 GAMDDLWAEALSEQKSTSSKSAAETVFQQFGGGDVSGTLQDIDLIMDIPVKLTVELGRTR 72 D + A E +G ++ LI DIPV++TVE+ R R Sbjct: 9 DEPMDDLDLLGDDLDFDGPAMADELSSLPQDTALPTGNKSNMGLIRDIPVEVTVEVSRRR 68 Query: 73 MTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQGEVVVVADKYGVRITDIITPS 129 + +KE++ + SV+ LD GEP+DI ING L G +++ KYGV++ ++ Sbjct: 69 LPLKEIMSIEPASVIMLDKQEGEPVDIKINGVLFGTGNIIIQDGKYGVQVLALVNNE 125 >UniRef50_C6N6Z9 Putative surface presentation of antigens (SPOA) protein n=1 Tax=Legionella drancourtii LLAP12 RepID=C6N6Z9_9GAMM Length = 101 Score = 89.5 bits (221), Expect = 3e-17, Method: Composition-based stats. Identities = 29/96 (30%), Positives = 48/96 (50%) Query: 32 KSAAETVFQQFGGGDVSGTLQDIDLIMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDG 91 K T + L+ DI V+ TV +G +TI EL L G + L+ Sbjct: 6 KKVNLTEHPPQQTEGQFINKNYLGLVGDIEVQCTVRIGTLNLTIAELKELKSGQELHLEQ 65 Query: 92 LAGEPLDILINGYLIAQGEVVVVADKYGVRITDIIT 127 EP++I++N +IA+GE++ D + V+IT+I + Sbjct: 66 KTHEPVEIVLNERVIARGELMSHEDHFAVQITEIYS 101 >UniRef50_C5JB71 Flagellar motor switch/type III secretory pathway protein n=1 Tax=uncultured bacterium RepID=C5JB71_9BACT Length = 117 Score = 89.1 bits (220), Expect = 4e-17, Method: Composition-based stats. Identities = 38/117 (32%), Positives = 66/117 (56%) Query: 15 MDDLWAEALSEQKSTSSKSAAETVFQQFGGGDVSGTLQDIDLIMDIPVKLTVELGRTRMT 74 M + L + + ++ AE + + ++ + ++PV++T LG + Sbjct: 1 MAEDDGAELDMAAAMAGQAKAEAKKSAASPKKAARSDGRMEAVYEVPVEVTAVLGTASLQ 60 Query: 75 IKELLRLTQGSVVALDGLAGEPLDILINGYLIAQGEVVVVADKYGVRITDIITPSER 131 + ++L+L +G+VV LD + GEP+DI N LIA+GEVVVV D+ ++ITDII + R Sbjct: 61 VSQILKLGRGAVVELDRIVGEPVDINANNRLIARGEVVVVEDRLAIQITDIIRSNIR 117 >UniRef50_Q30RD7 Surface presentation of antigens (SPOA) protein n=15 Tax=Epsilonproteobacteria RepID=Q30RD7_SULDN Length = 111 Score = 89.1 bits (220), Expect = 4e-17, Method: Composition-based stats. Identities = 26/98 (26%), Positives = 56/98 (57%) Query: 40 QQFGGGDVSGTLQDIDLIMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDI 99 ++ + + D ++D+ V+ +LG T +++ E+L+L +GS++ L AGE ++ Sbjct: 12 EEIFDSESELSWMDYSGLLDMEVEFISDLGETELSVGEILQLKKGSIIDLKKPAGESVET 71 Query: 100 LINGYLIAQGEVVVVADKYGVRITDIITPSERMRRLSR 137 +NG ++ +GEV+V +RI +++ S + LS+ Sbjct: 72 YVNGRILGRGEVMVYEKNLAIRINEVLDSSAVLYHLSK 109 >UniRef50_A3SFT8 Surface presentation of antigens (SPOA) protein n=2 Tax=Sulfitobacter RepID=A3SFT8_9RHOB Length = 114 Score = 88.8 bits (219), Expect = 4e-17, Method: Composition-based stats. Identities = 36/103 (34%), Positives = 56/103 (54%), Gaps = 1/103 (0%) Query: 25 EQKSTSSKSAAETVFQQFGGGDVSGTLQDIDLIMDIPVKLTVELGRTRMTIKELLRLTQG 84 +Q T + + +D I + + + V LGR+RM I ELL LT+G Sbjct: 5 DQDKTQADLTDNNAQDAETKAPAGLDGKSLDAIFGVKLDVRVVLGRSRMPISELLNLTKG 64 Query: 85 SVVALDGLAGEPLDILINGYLIAQGEVVVV-ADKYGVRITDII 126 SV+ LD GEP+DI+IN ++A+G++V V D GV + +I+ Sbjct: 65 SVIELDRRVGEPVDIMINDRMVARGDLVRVQGDSLGVALREIV 107 >UniRef50_A4Y0Q2 Flagellar motor switch protein FliN n=1 Tax=Pseudomonas mendocina ymp RepID=A4Y0Q2_PSEMY Length = 123 Score = 88.8 bits (219), Expect = 5e-17, Method: Composition-based stats. Identities = 38/90 (42%), Positives = 53/90 (58%) Query: 35 AETVFQQFGGGDVSGTLQDIDLIMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAG 94 S QD+ IPV +T+E+ T +T+KEL+ + GSV+ALD LAG Sbjct: 23 EPVSEPVAEQAPASLPQQDLSFFGKIPVNVTLEVASTEITLKELMDVDAGSVIALDKLAG 82 Query: 95 EPLDILINGYLIAQGEVVVVADKYGVRITD 124 EPLD+ +NG L A+ EVVV+ YG+RI + Sbjct: 83 EPLDVKVNGALFAKAEVVVMNGNYGLRIVE 112 >UniRef50_O54245 Flagellar motor switch protein fliN n=15 Tax=Rhizobiales RepID=FLIN_RHIME Length = 198 Score = 88.8 bits (219), Expect = 5e-17, Method: Composition-based stats. Identities = 33/86 (38%), Positives = 57/86 (66%), Gaps = 3/86 (3%) Query: 43 GGGDVSGTLQDIDLIMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILIN 102 SG ++DLIMDIP+ + + LG +RM + L+ LT+G+ +ALD GEP++I++N Sbjct: 108 ETAPGSGMTANMDLIMDIPIDVQIVLGTSRMQVSGLMALTEGATIALDRKIGEPVEIMVN 167 Query: 103 GYLIAQGEVVVVAD---KYGVRITDI 125 G +I +GE+ V+ ++GV++ +I Sbjct: 168 GRVIGRGEITVLEGDVTRFGVKLLEI 193 >UniRef50_A8AKJ4 Putative uncharacterized protein n=1 Tax=Citrobacter koseri ATCC BAA-895 RepID=A8AKJ4_CITK8 Length = 132 Score = 88.8 bits (219), Expect = 5e-17, Method: Composition-based stats. Identities = 40/129 (31%), Positives = 63/129 (48%), Gaps = 3/129 (2%) Query: 1 MSDMNNPADDNNGAMDDLWAEALSEQKSTSSKSAAETVFQQFGGGDVSGTLQDIDLIMDI 60 MSD+ + + D ++ E + + Q ++ + L I Sbjct: 1 MSDLQHELSQSLDLDDLNLSDMTQED---TVEGNIRLDLQPETRNTAMTDIRKMALFSRI 57 Query: 61 PVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQGEVVVVADKYGV 120 PV LT+E+ +++ EL+ + SVV LD +AGEPLDI +NG L + EVVV+ DKYG+ Sbjct: 58 PVTLTLEVASVNISLAELMSVNSDSVVELDKMAGEPLDIKVNGILFGKAEVVVLNDKYGL 117 Query: 121 RITDIITPS 129 RI + Sbjct: 118 RIIEFNAKE 126 >UniRef50_UPI0001744A0D type III secretion system protein n=1 Tax=Verrucomicrobium spinosum DSM 4136 RepID=UPI0001744A0D Length = 342 Score = 88.4 bits (218), Expect = 6e-17, Method: Composition-based stats. Identities = 23/88 (26%), Positives = 44/88 (50%) Query: 38 VFQQFGGGDVSGTLQDIDLIMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPL 97 F + + L+ + V+LT +G T+++L L G+ + L A + + Sbjct: 252 QFIMSDPAPTPAATEPLALVDQLEVELTFLVGTHAATLEQLRSLAPGACIELPTPASQAV 311 Query: 98 DILINGYLIAQGEVVVVADKYGVRITDI 125 I NG I +GE++ + ++ GVRIT++ Sbjct: 312 TICANGRAIGKGELLDIGNRIGVRITEL 339 >UniRef50_C9R9Y4 Surface presentation of antigens (SPOA) protein n=1 Tax=Ammonifex degensii KC4 RepID=C9R9Y4_AMMDK Length = 114 Score = 88.4 bits (218), Expect = 6e-17, Method: Composition-based stats. Identities = 31/103 (30%), Positives = 58/103 (56%), Gaps = 2/103 (1%) Query: 30 SSKSAAETVFQQFGGGDV--SGTLQDIDLIMDIPVKLTVELGRTRMTIKELLRLTQGSVV 87 ++ VF F ++L+ + +++T LG +T++ELL L +GSV+ Sbjct: 1 MQAKISKVVFSPFSTEKAWEPKATTALELLHGVTLEVTALLGEATLTVQELLELREGSVI 60 Query: 88 ALDGLAGEPLDILINGYLIAQGEVVVVADKYGVRITDIITPSE 130 LD +AGE +D+L++G +GEV+V+ +++ VR+ + P E Sbjct: 61 RLDRVAGEAVDLLLDGQKFGRGEVMVLNERFVVRVLQVFPPQE 103 >UniRef50_B3RAD9 SctQ: non flagellar T3S system conserved protein. FliN/MopA/SpaO family n=1 Tax=Cupriavidus taiwanensis RepID=B3RAD9_CUPTR Length = 399 Score = 88.4 bits (218), Expect = 7e-17, Method: Composition-based stats. Identities = 28/123 (22%), Positives = 46/123 (37%), Gaps = 17/123 (13%) Query: 2 SDMNNPADDNNGAMDDLWAEALSEQKSTSSKSAAETVFQQFGGGDVSGTLQDIDLIMDIP 61 +D + D +NGA + A Q +A + + + Sbjct: 286 ADSTDSTDVSNGAHMEEQDPARQSQPIPHPDAAQPP----------------LSRLDQLE 329 Query: 62 VKLTVELGRTRMTIKELLRLTQGSVVALDGLA-GEPLDILINGYLIAQGEVVVVADKYGV 120 V L E+G + + EL + G V L + I+ NG I G ++ V ++ GV Sbjct: 330 VTLRFEVGDVAVPLAELRAVAPGYVFELPQPLKQSEVRIVANGNRIGTGTLIAVGNRLGV 389 Query: 121 RIT 123 RIT Sbjct: 390 RIT 392 >UniRef50_B1ZR34 Flagellar motor switch protein FliN n=3 Tax=Verrucomicrobia RepID=B1ZR34_OPITP Length = 84 Score = 88.0 bits (217), Expect = 9e-17, Method: Composition-based stats. Identities = 31/81 (38%), Positives = 57/81 (70%) Query: 50 TLQDIDLIMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQG 109 + +D+++D+ VK+TV+LG ++ ++E+L L+ GSVV L A +P+ + +N L+A G Sbjct: 2 EEKALDIVLDVKVKVTVQLGSVQLPMREVLELSPGSVVQLTQHASDPVGLFVNDQLVAYG 61 Query: 110 EVVVVADKYGVRITDIITPSE 130 EVVVV D +G++IT+++ + Sbjct: 62 EVVVVEDNFGIKITELVGSEK 82 >UniRef50_Q6MBC5 Putative flagellar motor switch protein (= type III secretion translocase SctQ) n=1 Tax=Candidatus Protochlamydia amoebophila UWE25 RepID=Q6MBC5_PARUW Length = 445 Score = 87.6 bits (216), Expect = 1e-16, Method: Composition-based stats. Identities = 31/114 (27%), Positives = 63/114 (55%), Gaps = 7/114 (6%) Query: 12 NGAMDDLWAEALSEQKSTSSKSAAETVFQQFGGGDVSGTLQDIDLIMDIPVKLTVELGRT 71 N +D++ E S K+ +S+S+ + + + IPV LTVE+GR Sbjct: 337 NFTLDEVTEEEQSSPKNNASQSSPASSITENTKTGLITP-------NQIPVNLTVEVGRI 389 Query: 72 RMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQGEVVVVADKYGVRITDI 125 +M++ LL+L G+++ L+ + +D+ ING ++ +GE++ + + GVR+ ++ Sbjct: 390 QMSMDHLLKLEPGNMLELNIKPEDGVDLTINGKIVGRGELLRIGEVLGVRVLEL 443 >UniRef50_A7K1M2 Flagellar motor switch protein FliN n=17 Tax=Vibrionaceae RepID=A7K1M2_VIBSE Length = 123 Score = 86.8 bits (214), Expect = 2e-16, Method: Composition-based stats. Identities = 37/117 (31%), Positives = 63/117 (53%), Gaps = 10/117 (8%) Query: 23 LSEQKSTSSKSAAETVFQQFG----------GGDVSGTLQDIDLIMDIPVKLTVELGRTR 72 +SE T++ A E F F + + +D+ IPV +T+E+ Sbjct: 1 MSEAPETNAFDAEELNFDDFQLEDFEAESTLQQEPATAERDLSFFKSIPVTVTLEVASKE 60 Query: 73 MTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQGEVVVVADKYGVRITDIITPS 129 + + +L++ +G+V+ L+ L GEPLD+ +NG L+ EVVVV DKYG+R+ D+ + Sbjct: 61 IPLGDLMKAGEGTVIELEKLNGEPLDVKVNGSLMGHAEVVVVNDKYGLRLIDVHDSA 117 >UniRef50_Q02KI5 Translocation protein in type III secretion n=5 Tax=Pseudomonas aeruginosa RepID=Q02KI5_PSEAB Length = 309 Score = 86.8 bits (214), Expect = 2e-16, Method: Composition-based stats. Identities = 23/97 (23%), Positives = 44/97 (45%) Query: 34 AAETVFQQFGGGDVSGTLQDIDLIMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLA 93 + + +D+ + +P+ ++ E+GR + + L L GS++ LD Sbjct: 212 STQLELLDMHDTPSLADSEDLHELDQLPIPVSFEVGRRTLDLHTLSTLQPGSLLDLDCAL 271 Query: 94 GEPLDILINGYLIAQGEVVVVADKYGVRITDIITPSE 130 + IL N + GE+V + D+ GVR+T + E Sbjct: 272 DGEVRILANQRCLGIGELVRLQDRLGVRVTRLFGHDE 308 >UniRef50_Q1CTU2 Flagellar switch protein n=20 Tax=Helicobacteraceae RepID=Q1CTU2_HELPH Length = 123 Score = 86.1 bits (212), Expect = 3e-16, Method: Composition-based stats. Identities = 26/85 (30%), Positives = 51/85 (60%) Query: 53 DIDLIMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQGEVV 112 D ++D+ + + ELG T++ + ++LR +GSV+ L AGE +D +NG +I +GEV+ Sbjct: 37 DYKNLLDMEIVFSAELGSTQIPLLQILRFEKGSVIDLQKPAGESVDTFVNGRVIGKGEVM 96 Query: 113 VVADKYGVRITDIITPSERMRRLSR 137 V +R+ +I+ + + L++ Sbjct: 97 VFERNLAIRLNEILDSNAIVYYLAK 121 >UniRef50_Q11M61 Surface presentation of antigens (SPOA) protein n=1 Tax=Chelativorans sp. BNC1 RepID=Q11M61_MESSB Length = 354 Score = 85.7 bits (211), Expect = 4e-16, Method: Composition-based stats. Identities = 28/110 (25%), Positives = 51/110 (46%) Query: 20 AEALSEQKSTSSKSAAETVFQQFGGGDVSGTLQDIDLIMDIPVKLTVELGRTRMTIKELL 79 A + E + + ++ + +FG G + D I D+PV+L R+T++EL Sbjct: 240 AAEIFESAESIIMNEIDSDWSEFGAGAIYDEPPLADPIEDLPVRLDFLFSTQRITLEELR 299 Query: 80 RLTQGSVVALDGLAGEPLDILINGYLIAQGEVVVVADKYGVRITDIITPS 129 L G+ + L+ P+ IL NG +G +V + D GV+++ Sbjct: 300 ALGPGATLRLNVDLTRPVTILANGAPAGRGYLVQIGDHMGVQLSHWAGTK 349 >UniRef50_O67495 Flagellar motor switch protein fliN n=1 Tax=Aquifex aeolicus RepID=FLIN_AQUAE Length = 112 Score = 85.3 bits (210), Expect = 6e-16, Method: Composition-based stats. Identities = 34/111 (30%), Positives = 59/111 (53%) Query: 19 WAEALSEQKSTSSKSAAETVFQQFGGGDVSGTLQDIDLIMDIPVKLTVELGRTRMTIKEL 78 E E + ++ E V ++ ++ I DIPV++ V +GR T+ EL Sbjct: 1 MEEQTKEIQEEKKETPQEEVREEKKEEKKVSVIELIQHFSDIPVEVEVVVGRANKTLGEL 60 Query: 79 LRLTQGSVVALDGLAGEPLDILINGYLIAQGEVVVVADKYGVRITDIITPS 129 L + GSV+ +D + +DI +NG LIA+GE+V++ K GV+I +++ Sbjct: 61 LAMGIGSVIEIDREPKDLVDIKVNGKLIAKGELVIIDGKIGVKIKEVVKEQ 111 >UniRef50_UPI0001AF390C type III secretion component, putative n=2 Tax=Pseudomonas syringae group RepID=UPI0001AF390C Length = 353 Score = 84.9 bits (209), Expect = 6e-16, Method: Composition-based stats. Identities = 26/90 (28%), Positives = 49/90 (54%), Gaps = 1/90 (1%) Query: 35 AETVFQQFGGGDVSGTLQDID-LIMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLA 93 + + T D+D + D+P+ L +LG +T+ +L + GS++ L GLA Sbjct: 259 PPYTYDRNDLMSELSTDADLDTSLDDLPLTLVCQLGSVELTLAQLREMAPGSLLPLAGLA 318 Query: 94 GEPLDILINGYLIAQGEVVVVADKYGVRIT 123 + +D+++NG + +GE+V + D GVR+ Sbjct: 319 HDEVDLMVNGRRVGRGELVTIGDGLGVRLL 348 Score = 40.6 bits (94), Expect = 0.014, Method: Composition-based stats. Identities = 15/51 (29%), Positives = 25/51 (49%) Query: 55 DLIMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYL 105 D + + + L+VE G+ +T EL L G VV LD L + + + + Sbjct: 184 DPLEGLRLALSVEAGQAPLTCAELRSLLPGDVVMLDTLPDAQVLLRLGHHC 234 >UniRef50_B1K3A4 Flagellar motor switch protein FliN n=1 Tax=Burkholderia cenocepacia MC0-3 RepID=B1K3A4_BURCC Length = 113 Score = 84.9 bits (209), Expect = 6e-16, Method: Composition-based stats. Identities = 31/86 (36%), Positives = 49/86 (56%) Query: 40 QQFGGGDVSGTLQDIDLIMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDI 99 + + + ++ IPV+LT+E+G + + +LL GS V L+ LAGEPL I Sbjct: 20 DPKSITETASPRDPMRMLRRIPVRLTLEVGEATVPLADLLSYETGSTVELNRLAGEPLVI 79 Query: 100 LINGYLIAQGEVVVVADKYGVRITDI 125 +NG + GEVVV + YG+RI ++ Sbjct: 80 KVNGTPVGLGEVVVSGEHYGLRIIEL 105 >UniRef50_A4J755 Surface presentation of antigens (SPOA) protein n=1 Tax=Desulfotomaculum reducens MI-1 RepID=A4J755_DESRM Length = 128 Score = 84.9 bits (209), Expect = 6e-16, Method: Composition-based stats. Identities = 31/120 (25%), Positives = 60/120 (50%), Gaps = 1/120 (0%) Query: 12 NGAMDDLWAEALSEQKSTSSKSAAETVFQQFGGGDVSGTLQ-DIDLIMDIPVKLTVELGR 70 N +L+ L ++ + + F ++ + I D+ V ++ ELG Sbjct: 3 NEKEIELFLSELDGTQTREEAAIKKVRFPPLDSFRQERIIKTSLSHIEDVKVTISAELGE 62 Query: 71 TRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQGEVVVVADKYGVRITDIITPSE 130 + +E+L L G+V+ ++ AG+ +++ IN AQGE+++V DK+ VRI I +P + Sbjct: 63 KILKFREVLNLDVGTVLDMEKSAGDAINVYINDIKAAQGEIIIVNDKFAVRINSITSPKK 122 >UniRef50_C3XFR2 Flagellar motor switch protein FliN n=1 Tax=Helicobacter bilis ATCC 43879 RepID=C3XFR2_9HELI Length = 128 Score = 84.9 bits (209), Expect = 7e-16, Method: Composition-based stats. Identities = 22/90 (24%), Positives = 52/90 (57%) Query: 48 SGTLQDIDLIMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIA 107 + + + ++D+ V + +LG T++ + E+L+ +GS++ L AG ++I +N ++ Sbjct: 32 EDMMANYEGLLDMKVLFSADLGTTQIPLNEILKYEKGSIIDLQKPAGASVEIFVNDRVVG 91 Query: 108 QGEVVVVADKYGVRITDIITPSERMRRLSR 137 +GEV+V +RI +I+ + + ++R Sbjct: 92 KGEVMVYERNLAIRINEILDSNAIVYYIAR 121 >UniRef50_P57183 Flagellar motor switch protein fliN n=3 Tax=Buchnera aphidicola (Acyrthosiphon pisum) RepID=FLIN_BUCAI Length = 133 Score = 84.9 bits (209), Expect = 8e-16, Method: Composition-based stats. Identities = 36/122 (29%), Positives = 68/122 (55%) Query: 4 MNNPADDNNGAMDDLWAEALSEQKSTSSKSAAETVFQQFGGGDVSGTLQDIDLIMDIPVK 63 M+ +++ + + + + + + + I+++PV Sbjct: 1 MSKIQKNSDNDKLIDSEKKIPTDQDVDKNLLPQENSKNSTLDNTIDIVDSKKTILNVPVN 60 Query: 64 LTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQGEVVVVADKYGVRIT 123 +TVELG +R+ IK+ L+ ++GS++ L+ EPL+I +NG+LIA GE+VV+ +KYG+RIT Sbjct: 61 ITVELGTSRIKIKDFLKFSKGSMLILNESIKEPLNIFMNGHLIASGEIVVLEEKYGIRIT 120 Query: 124 DI 125 +I Sbjct: 121 NI 122 >UniRef50_Q2NR65 Type III secretion apparatus SpaO n=2 Tax=Sodalis glossinidius RepID=Q2NR65_SODGM Length = 338 Score = 84.5 bits (208), Expect = 8e-16, Method: Composition-based stats. Identities = 32/126 (25%), Positives = 61/126 (48%), Gaps = 6/126 (4%) Query: 2 SDMNNPADDNNGAMDDLW--AEALSEQKSTSSKSAAETVFQQFGGGDVSGTLQDIDLIMD 59 +D A + + D A A+ + +AA T + GD + D + + Sbjct: 209 NDEATLAAGHISPLPDYASGAAAVHPKVRDGLAAAAPTPTGRLALGDDTAA----DPLAN 264 Query: 60 IPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQGEVVVVADKYG 119 +P+ L L R +++ E+ + QG V+ LD + ++I NG+L+A GE+V + D+ G Sbjct: 265 LPLTLEFILQRRYLSLGEIQQFRQGKVLELDPEGEKHIEIRANGHLLALGELVQLEDRLG 324 Query: 120 VRITDI 125 V + ++ Sbjct: 325 VELMEL 330 >UniRef50_Q2SH51 Flagellar motor switch/type III secretory pathway protein n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SH51_HAHCH Length = 397 Score = 84.1 bits (207), Expect = 1e-15, Method: Composition-based stats. Identities = 24/90 (26%), Positives = 41/90 (45%) Query: 40 QQFGGGDVSGTLQDIDLIMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDI 99 Q + + D+PV++ E+ R T+ ++ L G +ALD + + Sbjct: 283 QPMTHTTTPNNDAPLQPLHDLPVEVVFEVARRTATLTQIQSLAPGQTIALDKPLSGAVTL 342 Query: 100 LINGYLIAQGEVVVVADKYGVRITDIITPS 129 L+ IA+ E+V V D+ G RIT + P Sbjct: 343 LVQSQAIAEAELVQVGDQIGARITRLSLPP 372 >UniRef50_B8CYQ6 Flagellar motor switch protein FliM n=1 Tax=Halothermothrix orenii H 168 RepID=B8CYQ6_HALOH Length = 334 Score = 83.8 bits (206), Expect = 1e-15, Method: Composition-based stats. Identities = 30/102 (29%), Positives = 47/102 (46%), Gaps = 4/102 (3%) Query: 30 SSKSAAETVFQQFGGGDVSGTLQDIDL----IMDIPVKLTVELGRTRMTIKELLRLTQGS 85 Q F T Q I+ + P+++ E+G+T++T+ +LL L G Sbjct: 223 EPIVPQLNAQQWFSNTREERTAQHIEAIKKKLKRAPLEVIAEVGKTQLTVTDLLYLQPGD 282 Query: 86 VVALDGLAGEPLDILINGYLIAQGEVVVVADKYGVRITDIIT 127 V+ LD A E +DI I + QG V V+ITD+I+ Sbjct: 283 VIRLDKKAEEKVDIRIGKNVKFQGVAGVSNKHMAVKITDVIS 324 >UniRef50_Q7UIS4 Probable flagellar motor switch protein fliN [Fragment] n=1 Tax=Rhodopirellula baltica RepID=Q7UIS4_RHOBA Length = 144 Score = 83.8 bits (206), Expect = 2e-15, Method: Composition-based stats. Identities = 29/124 (23%), Positives = 54/124 (43%), Gaps = 14/124 (11%) Query: 7 PADDNNGAMDDLWAEALSEQKSTSSKSAAETVFQQFGGGDVSGTLQDIDLIMDIPVKLTV 66 P D + +E +E K T +++++ ++ I + V Sbjct: 34 PVDKRCVRIQGRMSENATEDKPTEPSPPTSSMYKEK--------------VLKIRTTVNV 79 Query: 67 ELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQGEVVVVADKYGVRITDII 126 L + ++++L L GS++ D PL + G+ IA GE V + DK+G+R+ +I Sbjct: 80 TLAEKKEPLRKILALVPGSMLTFDVHCDRPLTLRAGGHPIATGETVKIGDKFGLRVREIG 139 Query: 127 TPSE 130 P E Sbjct: 140 VPKE 143 >UniRef50_A9APA9 Type III secretion system apparatus protein YscQ/HrcQ n=17 Tax=Burkholderia RepID=A9APA9_BURM1 Length = 443 Score = 83.4 bits (205), Expect = 2e-15, Method: Composition-based stats. Identities = 29/111 (26%), Positives = 45/111 (40%), Gaps = 2/111 (1%) Query: 25 EQKSTSSKSAAETVFQQFGGGDVSGTLQDI-DLIMDIPVKLTVELGRTRMTIKELLRLTQ 83 E+ T G + D + + V L EL T M + EL L Sbjct: 333 ERIREMPLEPTRTDTPPATGAAHDASPADAPRALDGLAVDLRFELPPTSMPLGELSALQP 392 Query: 84 GSVVALDGLAGEPL-DILINGYLIAQGEVVVVADKYGVRITDIITPSERMR 133 G+V+ L + + ++ NG LI G ++ V K GVR+ + P+ R R Sbjct: 393 GAVIELQQGINQSVIHLVANGMLIGTGHLIAVGQKLGVRVVTLTQPAPRER 443 Score = 41.8 bits (97), Expect = 0.008, Method: Composition-based stats. Identities = 21/98 (21%), Positives = 37/98 (37%), Gaps = 9/98 (9%) Query: 35 AETVFQQFGGGDVSGTLQDIDLIMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDG-LA 93 A F + ++PV L E+GRT +T+ EL + G ++A++ A Sbjct: 243 APDALAVFFASAPAARPDAHAAYANLPVPLVFEIGRTELTMAELADVVGGDIIAIERWHA 302 Query: 94 GEPLDILINGYLIA-----QGEVVVVADKYGV-RITDI 125 E + + A G + V RI ++ Sbjct: 303 HEQNLLCVGRVPAAPAWEITGRP--SGSRLTVERIREM 338 >UniRef50_C5CYF0 Surface presentation of antigens (SPOA) protein n=1 Tax=Variovorax paradoxus S110 RepID=C5CYF0_VARPS Length = 151 Score = 83.4 bits (205), Expect = 2e-15, Method: Composition-based stats. Identities = 27/116 (23%), Positives = 52/116 (44%) Query: 10 DNNGAMDDLWAEALSEQKSTSSKSAAETVFQQFGGGDVSGTLQDIDLIMDIPVKLTVELG 69 ++ + + Q A G + L+D + + I +L V +G Sbjct: 26 ESRARVAQGPGSLPTAQIIALPDLHAGAEGDAANQGGDASILKDWNPLHQIKARLQVCVG 85 Query: 70 RTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQGEVVVVADKYGVRITDI 125 +++ ELL + V+ LD P+D+ I G ++A+G++V V + VRIT++ Sbjct: 86 AVSLSVGELLGAKEHQVLRLDREIDHPVDLTIEGKVVARGQLVAVDGHFAVRITEL 141 >UniRef50_C3KNB2 Type III secretion system translocation protein, RhcQ n=1 Tax=Rhizobium sp. NGR234 RepID=C3KNB2_RHISN Length = 351 Score = 83.4 bits (205), Expect = 2e-15, Method: Composition-based stats. Identities = 21/80 (26%), Positives = 46/80 (57%) Query: 46 DVSGTLQDIDLIMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYL 105 + +++ + D+P++L E+GR +KE+ R+ +G+V+ P+ IL NG L Sbjct: 268 QQPPSSGELEPLADLPIELVFEIGRAEFPLKEIARMGEGTVLHASPSLSSPVSILANGRL 327 Query: 106 IAQGEVVVVADKYGVRITDI 125 + +GE++ + + G+R+ + Sbjct: 328 VGKGELIRIGEGLGIRVVRL 347 >UniRef50_B9Z4S4 Flagellar motor switch protein FliN n=1 Tax=Lutiella nitroferrum 2002 RepID=B9Z4S4_9NEIS Length = 119 Score = 83.4 bits (205), Expect = 2e-15, Method: Composition-based stats. Identities = 33/70 (47%), Positives = 50/70 (71%) Query: 56 LIMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQGEVVVVA 115 + IPV LT+E+G +++ +L+ + QGSV+ LD LAGEPLDI +NG +I + EVVV Sbjct: 40 FLRKIPVTLTLEVGSADISLADLVNIGQGSVLELDKLAGEPLDIKVNGSVIGRAEVVVAG 99 Query: 116 DKYGVRITDI 125 D YG+R+ ++ Sbjct: 100 DNYGLRVVEL 109 >UniRef50_Q2CGH8 Flagellar motor switch protein FliN n=3 Tax=Rhodobacteraceae RepID=Q2CGH8_9RHOB Length = 132 Score = 83.4 bits (205), Expect = 2e-15, Method: Composition-based stats. Identities = 36/128 (28%), Positives = 74/128 (57%), Gaps = 5/128 (3%) Query: 1 MSDMNNPADDNNGAMDDLWAEAL-SEQKSTSSKSAAETVFQQFGGGDVSGTLQDIDLIMD 59 M D + A + L E ++ ++ E + + GD + I+ +++ Sbjct: 1 MPDPKTDKPSPDTAAPGQPDDTLLPELEAPEEQTVLENMVGEQVNGDGG---RSIEAMLN 57 Query: 60 IPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQGEVVVVAD-KY 118 + +++ + LGR+RM I +LL+L++GS++ LD GEP+D++++ L+A+G++V V D + Sbjct: 58 VGLEVNIVLGRSRMPISQLLKLSRGSIIELDKRIGEPVDMIVSDRLVARGDLVRVGDNRV 117 Query: 119 GVRITDII 126 GV +T+I+ Sbjct: 118 GVTLTEIV 125 >UniRef50_A3WGR5 Flagellar motor switch protein n=1 Tax=Erythrobacter sp. NAP1 RepID=A3WGR5_9SPHN Length = 102 Score = 83.0 bits (204), Expect = 3e-15, Method: Composition-based stats. Identities = 29/82 (35%), Positives = 51/82 (62%) Query: 54 IDLIMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQGEVVV 113 + D+ V+L+VELGRT M +K++L + +GSVV L+ L E LD+ NG ++A+GEV+ Sbjct: 8 LKRFGDVTVRLSVELGRTEMPLKDVLAIDEGSVVPLNRLTDELLDVTANGRVVARGEVIA 67 Query: 114 VADKYGVRITDIITPSERMRRL 135 ++ +RI +++ + Sbjct: 68 QDGRFALRIVELVGDPSAEEPI 89 >UniRef50_A4U4R5 Surface presentation of antigens (SPOA) protein n=1 Tax=Magnetospirillum gryphiswaldense RepID=A4U4R5_9PROT Length = 90 Score = 82.6 bits (203), Expect = 3e-15, Method: Composition-based stats. Identities = 25/75 (33%), Positives = 44/75 (58%) Query: 55 DLIMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQGEVVVV 114 + + + V+ LG + I +LL+L +G+VV LD +P+D+ +N IA+ EVVVV Sbjct: 14 EAVYGVNVECIAVLGTANLPIAQLLKLGRGAVVELDRKVNDPVDLYVNRKHIARAEVVVV 73 Query: 115 ADKYGVRITDIITPS 129 D V +T+++ + Sbjct: 74 EDHLAVTVTEVLKRA 88 >UniRef50_D2R2R8 Surface presentation of antigens (SPOA) protein n=1 Tax=Pirellula staleyi DSM 6068 RepID=D2R2R8_9PLAN Length = 329 Score = 82.6 bits (203), Expect = 4e-15, Method: Composition-based stats. Identities = 24/102 (23%), Positives = 46/102 (45%) Query: 35 AETVFQQFGGGDVSGTLQDIDLIMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAG 94 A + I+ I V + V L T++ +K ++ L GS++ + Sbjct: 218 ASPPPSDNVEERIYKLPPYTRSILRIEVPVRVTLATTQLPLKRIVELGPGSIIQFEKPCD 277 Query: 95 EPLDILINGYLIAQGEVVVVADKYGVRITDIITPSERMRRLS 136 L + + + +A GE V V +K+G+R+T ++ P ER + Sbjct: 278 SELSLQVGEHEVAIGEAVKVGEKFGLRLTSMVMPPERFFAVR 319 >UniRef50_Q8KA38 Flagellar motor switch protein fliN n=1 Tax=Buchnera aphidicola (Schizaphis graminum) RepID=FLIN_BUCAP Length = 133 Score = 82.6 bits (203), Expect = 4e-15, Method: Composition-based stats. Identities = 29/69 (42%), Positives = 46/69 (66%) Query: 57 IMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQGEVVVVAD 116 + DI + +TVELG++++ IK+LL ++GS++ L +PL + N LIA GE+V + Sbjct: 54 LFDIEMNITVELGKSKVKIKDLLNFSKGSMLFLQRKKEDPLKVFANNKLIALGEIVFSNN 113 Query: 117 KYGVRITDI 125 KYG+RI I Sbjct: 114 KYGIRIISI 122 >UniRef50_Q67MU5 Putative uncharacterized protein n=1 Tax=Symbiobacterium thermophilum RepID=Q67MU5_SYMTH Length = 227 Score = 82.2 bits (202), Expect = 5e-15, Method: Composition-based stats. Identities = 29/68 (42%), Positives = 47/68 (69%) Query: 57 IMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQGEVVVVAD 116 ++DI + L+VELG+ R+ + E+L + GSV+ LD LA EPL++ +NG EV+ + + Sbjct: 150 LLDIELTLSVELGKARLPLGEILSMGPGSVITLDRLASEPLNVKVNGLPAMTAEVIAIGE 209 Query: 117 KYGVRITD 124 KYG+RI + Sbjct: 210 KYGIRIVE 217 >UniRef50_C1SLE0 Flagellar motor switch/type III secretory pathway protein n=1 Tax=Denitrovibrio acetiphilus DSM 12809 RepID=C1SLE0_9BACT Length = 95 Score = 82.2 bits (202), Expect = 5e-15, Method: Composition-based stats. Identities = 25/68 (36%), Positives = 46/68 (67%) Query: 63 KLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQGEVVVVADKYGVRI 122 + VELGR + ++ELL +G+++ +GEP+D L+NG +A GE++V+ +++ VRI Sbjct: 17 DIDVELGRKMVKVRELLNWEKGTILKFTKTSGEPVDFLVNGKPLALGEIMVLDERFAVRI 76 Query: 123 TDIITPSE 130 T+I+ + Sbjct: 77 TEILEKED 84 >UniRef50_D2LD12 Surface presentation of antigens (SPOA) protein n=1 Tax=Rhodomicrobium vannielii ATCC 17100 RepID=D2LD12_RHOVA Length = 120 Score = 81.8 bits (201), Expect = 6e-15, Method: Composition-based stats. Identities = 29/84 (34%), Positives = 54/84 (64%), Gaps = 3/84 (3%) Query: 47 VSGTLQDIDLIMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLI 106 G ++ ++ IP+ L V LG M I ++ +L +G+V+ LD G+ +D++ING +I Sbjct: 33 KGGDPGSLERVLRIPLSLKVLLGSASMPIYQVTKLGRGAVIPLDRKVGDAVDVMINGRII 92 Query: 107 AQGEVVVVAD---KYGVRITDIIT 127 A+GE+VV+ + ++GV +T++I Sbjct: 93 AKGEIVVLDEEGSRFGVTLTEMID 116 >UniRef50_B1FB78 Type III secretion system apparatus protein YscQ/HrcQ n=1 Tax=Burkholderia ambifaria IOP40-10 RepID=B1FB78_9BURK Length = 309 Score = 81.8 bits (201), Expect = 7e-15, Method: Composition-based stats. Identities = 26/108 (24%), Positives = 48/108 (44%), Gaps = 6/108 (5%) Query: 28 STSSKSAAETVFQQFGGGDVSGTLQDID----LIMDIPVKLTVELGRTRMTIKELLRLTQ 83 S + T+ +Q +D + +PVKL + +T+ ++ RL Sbjct: 202 EISIEGNTMTMHEQASEMRGDSQPGMMDGQAFQVDALPVKLEFAFRQRELTVADVARLHP 261 Query: 84 GSVVALDGLAGEPLDILINGYLIAQGEVVVVADKYGVRI--TDIITPS 129 G+V+ LD A + I NG +A GE++ V ++ V I +++ P Sbjct: 262 GAVLPLDAGAEHEVKIYANGRYLALGELIQVGERLAVEIQSIELVDPK 309 >UniRef50_A9DR59 Flagellar motor switch protein n=1 Tax=Oceanibulbus indolifex HEL-45 RepID=A9DR59_9RHOB Length = 154 Score = 81.4 bits (200), Expect = 7e-15, Method: Composition-based stats. Identities = 34/145 (23%), Positives = 64/145 (44%), Gaps = 20/145 (13%) Query: 2 SDMNNPADDNNGAMDDLWAEALSEQKSTSSKSAAETVFQQFGG----------------- 44 D+ +P DD+ + ++ A GG Sbjct: 4 PDLQSPKDDDTSTEGKASEATPKTTEQDQPRADAFGNTASLGGDDAGVFPQLDTEDSRNA 63 Query: 45 --GDVSGTLQDIDLIMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILIN 102 I+ ++++ + + + LG+ RM I LL LT+GS+V L+ G P+D++++ Sbjct: 64 LAPRPEAGGAGINAMLNVGLDVQIVLGQARMPISRLLELTRGSIVELNRKIGAPVDLMVS 123 Query: 103 GYLIAQGEVVVVA-DKYGVRITDII 126 L+A+G++V V D+ GV +T I+ Sbjct: 124 DRLVARGDLVKVGEDRLGVSLTQIV 148 >UniRef50_A3ZT50 Probable flagellar motor switch protein fliN n=1 Tax=Blastopirellula marina DSM 3645 RepID=A3ZT50_9PLAN Length = 309 Score = 81.4 bits (200), Expect = 7e-15, Method: Composition-based stats. Identities = 25/80 (31%), Positives = 48/80 (60%) Query: 57 IMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQGEVVVVAD 116 ++ I +++ V L +M ++E+ L GS++ D E +D+ + + IAQGE V + D Sbjct: 224 LLKIAIEVNVTLASKKMRVREITELGIGSIIQFDKSCEESIDLEVGEHRIAQGEAVKIGD 283 Query: 117 KYGVRITDIITPSERMRRLS 136 K+G+R+T+++ P ER + Sbjct: 284 KFGMRVTNVLLPEERFISIK 303 >UniRef50_B0K1R9 Flagellar motor switch protein FliM n=14 Tax=Clostridia RepID=B0K1R9_THEPX Length = 332 Score = 81.4 bits (200), Expect = 8e-15, Method: Composition-based stats. Identities = 28/100 (28%), Positives = 46/100 (46%) Query: 31 SKSAAETVFQQFGGGDVSGTLQDIDLIMDIPVKLTVELGRTRMTIKELLRLTQGSVVALD 90 K + F + I + LT +LG T +T+KE L G ++ LD Sbjct: 229 PKLTTKFWFSSMKKEEKVNPELIKSKISKTYIPLTAQLGSTTITVKEFLDFEIGDIIMLD 288 Query: 91 GLAGEPLDILINGYLIAQGEVVVVADKYGVRITDIITPSE 130 EP+DI+I+ + +G + +KY VRIT++I + Sbjct: 289 KHFKEPVDIIIDKKVKFRGIPGIKNNKYSVRITEVIYKGD 328 >UniRef50_Q48IQ1 Type III secretion component, putative n=1 Tax=Pseudomonas syringae pv. phaseolicola 1448A RepID=Q48IQ1_PSE14 Length = 301 Score = 81.4 bits (200), Expect = 8e-15, Method: Composition-based stats. Identities = 24/89 (26%), Positives = 46/89 (51%), Gaps = 1/89 (1%) Query: 36 ETVFQQFGGGDVSGTLQDID-LIMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAG 94 F + D+D + ++P+ L +LG +T+ +L + GS++ L G Sbjct: 208 SHTFNRNDSMSEMTDGSDLDTSLDELPLTLVCQLGSVELTLAQLREMAPGSLLPLAGSRH 267 Query: 95 EPLDILINGYLIAQGEVVVVADKYGVRIT 123 + +D+++NG I +GE+V + D GVR+ Sbjct: 268 DEVDLMVNGRRIGRGELVSIGDGLGVRLL 296 Score = 39.5 bits (91), Expect = 0.036, Method: Composition-based stats. Identities = 17/58 (29%), Positives = 27/58 (46%), Gaps = 3/58 (5%) Query: 47 VSGTLQDIDLIMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGY 104 Q +D ++ + L+VE G+ +T EL L G VV LD LA + + + Sbjct: 127 AVTRPQPLDALV---LTLSVEAGQAPLTTTELHSLVPGDVVMLDTLADTQVLLRLGKR 181 >UniRef50_B2A358 Flagellar motor switch protein FliM n=1 Tax=Natranaerobius thermophilus JW/NM-WN-LF RepID=B2A358_NATTJ Length = 333 Score = 81.4 bits (200), Expect = 8e-15, Method: Composition-based stats. Identities = 20/84 (23%), Positives = 42/84 (50%) Query: 47 VSGTLQDIDLIMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLI 106 + + + V + EL RTR+++KE L L +G V++L+ +D+++ Sbjct: 245 EEESQALKNRLHKTQVPVKAELARTRISVKEFLNLQEGDVISLNKPFESEIDLIVGKKTK 304 Query: 107 AQGEVVVVADKYGVRITDIITPSE 130 +G+ + +K V+IT I+ + Sbjct: 305 FKGKPGSIKNKLAVQITQIVREGD 328 >UniRef50_B8DI82 Flagellar motor switch protein n=20 Tax=Listeria RepID=B8DI82_LISMH Length = 515 Score = 81.4 bits (200), Expect = 8e-15, Method: Composition-based stats. Identities = 32/133 (24%), Positives = 65/133 (48%), Gaps = 7/133 (5%) Query: 1 MSDMNNPADDNNGA--MDDLWAEALSEQKSTSSKSAAETV-FQQFGGGDVSGTLQDID-- 55 M + NPA A M + A+ ++E+++T+ E + V + + Sbjct: 382 MYQIFNPAAAKEMAQLMLGIQAKEVAEKEATTPAEIIEPEKPAEPVHQAVIEEKETLSEM 441 Query: 56 --LIMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQGEVVV 113 ++ DIPV L V G ++ +++ + + V+ L EPL + +NG I +G +V Sbjct: 442 EQILEDIPVTLEVVFGTAKVKLEKFISWCEKDVIILKESMNEPLVLALNGVTIGKGILVR 501 Query: 114 VADKYGVRITDII 126 V D +G+++T+++ Sbjct: 502 VDDHFGIQMTELV 514 >UniRef50_Q1MP57 Putative translocation protein in type III secretion n=1 Tax=Lawsonia intracellularis PHE/MN1-00 RepID=Q1MP57_LAWIP Length = 368 Score = 81.4 bits (200), Expect = 8e-15, Method: Composition-based stats. Identities = 26/126 (20%), Positives = 50/126 (39%), Gaps = 6/126 (4%) Query: 1 MSDMNNPADDNNGAMDDLWAEALSEQKSTSSKSAAETVFQQFGGGDVSGTLQDIDLIMDI 60 ++D+ P D NG + + ++A +Q G + +D Sbjct: 248 VNDVGYPEDQGNGGEQFVENHTEAPNSHGQQRTARANSGRQSGQQSSGIDVSGLD----- 302 Query: 61 PVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQGEVVVVADKYGV 120 + + EL R MT++ + L G AL P+ + +NG I G +V + GV Sbjct: 303 -LPVVFELERQFMTVQNIGLLAPGYTFALSVDVQAPVTLRVNGKAIGVGRLVDLNGSLGV 361 Query: 121 RITDII 126 ++ ++ Sbjct: 362 QVVQVM 367 >UniRef50_Q0C2D2 Flagellar motor switch protein FliN n=1 Tax=Hyphomonas neptunium ATCC 15444 RepID=Q0C2D2_HYPNA Length = 89 Score = 81.4 bits (200), Expect = 8e-15, Method: Composition-based stats. Identities = 29/82 (35%), Positives = 52/82 (63%) Query: 47 VSGTLQDIDLIMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLI 106 ++MD+PV++ V LG R+ ++EL+ L+ G +VAL+ EP+DI ++G L+ Sbjct: 3 EPKNPALEKMLMDVPVRVDVVLGEARIPMEELMALSPGEIVALERQTNEPVDIYVSGRLV 62 Query: 107 AQGEVVVVADKYGVRITDIITP 128 A+G++VV + GV +++II Sbjct: 63 ARGKLVVTDGQLGVTLSEIIDS 84 >UniRef50_D2TZ40 Type III secretion apparatus protein YscQ,HrcQ,SpaO n=1 Tax=Arsenophonus nasoniae RepID=D2TZ40_9ENTR Length = 292 Score = 81.4 bits (200), Expect = 8e-15, Method: Composition-based stats. Identities = 24/73 (32%), Positives = 40/73 (54%) Query: 58 MDIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQGEVVVVADK 117 DIP+ L L + ++ + EL + QG V+ D A + I+ NG LIA+G ++ + D+ Sbjct: 220 DDIPITLEYILQKRKIPLLELENIFQGKVLPCDLAAENNVKIVANGVLIAKGNIIWIEDR 279 Query: 118 YGVRITDIITPSE 130 GV IT + + Sbjct: 280 LGVEITHLFHNEK 292 >UniRef50_A2S1P2 Type III secretion system protein BsaV n=40 Tax=pseudomallei group RepID=A2S1P2_BURM9 Length = 335 Score = 81.1 bits (199), Expect = 9e-15, Method: Composition-based stats. Identities = 25/118 (21%), Positives = 46/118 (38%), Gaps = 5/118 (4%) Query: 8 ADDNNGAMDDLWAEALSEQKSTSSKSAAETVFQQFGGGDVSGTLQDIDLIMDIPVKLTVE 67 + A+D L + TS ++ +T + I +PV L Sbjct: 212 EPLADSAIDALHDASHDASHDTSHDTSHDTSHDEPTAAHAPPAFD----IDALPVTLEFV 267 Query: 68 LGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQGEVVVVADKYGVRITDI 125 L R+T+++L G V+ L A + I NG +GE++ V ++ V + + Sbjct: 268 LHDERVTVEQLAGCHLGMVLPL-RGAPGEVTIRANGRPFGRGELIQVGEQLAVEVKAL 324 >UniRef50_B1TBB1 Surface presentation of antigens (SPOA) protein n=1 Tax=Burkholderia ambifaria MEX-5 RepID=B1TBB1_9BURK Length = 111 Score = 80.7 bits (198), Expect = 1e-14, Method: Composition-based stats. Identities = 32/111 (28%), Positives = 56/111 (50%), Gaps = 1/111 (0%) Query: 18 LWAEALSEQKSTSSKSAAETVFQQFGGGDVSGTLQDIDLIMDIPVKLTVELGRTRMTIKE 77 + + A SE+ E + + +DL+ D+ V L V LG + +KE Sbjct: 1 MTSHATSERSVVMRVDLPEHEPAETTEARPVAHPR-LDLVGDVIVSLDVHLGSVDLAVKE 59 Query: 78 LLRLTQGSVVALDGLAGEPLDILINGYLIAQGEVVVVADKYGVRITDIITP 128 L+ L GS+V LD + +D+ +N +A+ E+V V D++G+RI +I+ Sbjct: 60 LMTLQSGSLVTLDRQLDDCVDVRLNERTVARAEIVAVDDRFGIRIVEIVEE 110 >UniRef50_Q67K08 Flagellar motor switch protein n=1 Tax=Symbiobacterium thermophilum RepID=Q67K08_SYMTH Length = 308 Score = 80.7 bits (198), Expect = 1e-14, Method: Composition-based stats. Identities = 25/101 (24%), Positives = 45/101 (44%) Query: 27 KSTSSKSAAETVFQQFGGGDVSGTLQDIDLIMDIPVKLTVELGRTRMTIKELLRLTQGSV 86 + S+ + ++ + S + + P+ + LG+TRM + E L L G V Sbjct: 208 EPVLSRLSPQSWLAETKHKSPSDEESLRRAVQEAPLPVKALLGKTRMRLGEFLALQVGDV 267 Query: 87 VALDGLAGEPLDILINGYLIAQGEVVVVADKYGVRITDIIT 127 + LD G L + + L Q + VV ++ V+IT +T Sbjct: 268 IRLDARVGGELPVFVGNKLAFQAKPGVVGERMAVQITRRVT 308 >UniRef50_B1LY10 Surface presentation of antigens (SPOA) protein n=9 Tax=Alphaproteobacteria RepID=B1LY10_METRJ Length = 122 Score = 80.7 bits (198), Expect = 1e-14, Method: Composition-based stats. Identities = 27/90 (30%), Positives = 50/90 (55%) Query: 43 GGGDVSGTLQDIDLIMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILIN 102 + + + + V LTV LGR RM + LLR+ +G+V+ L+ + ++IL N Sbjct: 11 DRTGGETGWRAVAVFETLKVDLTVVLGRARMPLHMLLRMGRGAVIELEASDSDMVEILAN 70 Query: 103 GYLIAQGEVVVVADKYGVRITDIITPSERM 132 + IA+G++VV D+ V +T++I + + Sbjct: 71 DHPIARGQIVVTGDRISVEVTELIRKAASI 100 >UniRef50_B8I3P2 Flagellar motor switch protein FliM n=2 Tax=Clostridium RepID=B8I3P2_CLOCE Length = 328 Score = 80.3 bits (197), Expect = 2e-14, Method: Composition-based stats. Identities = 27/105 (25%), Positives = 45/105 (42%), Gaps = 1/105 (0%) Query: 27 KSTSSKSAAETVFQQFGGGDVSGTLQDIDL-IMDIPVKLTVELGRTRMTIKELLRLTQGS 85 + K + + F V DI+ I V + LGRT ++I E L L G Sbjct: 223 EPIMPKLSTKLWFTNVENEKVEHNKSDIEFKIGHTYVPVRAVLGRTSISISEFLDLQGGD 282 Query: 86 VVALDGLAGEPLDILINGYLIAQGEVVVVADKYGVRITDIITPSE 130 V+ LD L+IL+ + + V +K ++IT+++ E Sbjct: 283 VLPLDTNVNGDLEILVGDLPKFKAKPGVKKNKVAIKITEVLRREE 327 >UniRef50_A7GNF7 CheC, inhibitor of MCP methylation n=70 Tax=Bacillales RepID=A7GNF7_BACCN Length = 554 Score = 80.3 bits (197), Expect = 2e-14, Method: Composition-based stats. Identities = 25/103 (24%), Positives = 46/103 (44%) Query: 21 EALSEQKSTSSKSAAETVFQQFGGGDVSGTLQDIDLIMDIPVKLTVELGRTRMTIKELLR 80 ++ E+ A + D ++ ++ + + G T TI+++L Sbjct: 449 ASIKEENVEEIPEPAVEPIELLEIHTGEPEYIDTSILQNVEMNVRFVFGSTVRTIEDILS 508 Query: 81 LTQGSVVALDGLAGEPLDILINGYLIAQGEVVVVADKYGVRIT 123 L + V LD EP+ I +N L+A GE+V V +GV++T Sbjct: 509 LHENDAVVLDEEVDEPIRIYVNNVLVAYGELVNVDGFFGVKVT 551 >UniRef50_Q7NUS2 Surface presentation of antigens; secretory proteins n=1 Tax=Chromobacterium violaceum RepID=Q7NUS2_CHRVO Length = 296 Score = 80.3 bits (197), Expect = 2e-14, Method: Composition-based stats. Identities = 19/89 (21%), Positives = 43/89 (48%) Query: 39 FQQFGGGDVSGTLQDIDLIMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLD 98 + + + + + +PV+L L ++ +T+ EL L + +V+ L A ++ Sbjct: 202 MEWQNEMAAAAETRPLADLDRLPVRLEFVLQQSEVTLDELRELCRSNVLPLSADAERRVE 261 Query: 99 ILINGYLIAQGEVVVVADKYGVRITDIIT 127 + NG L+ +GE+V + + GV + + Sbjct: 262 LRANGALLGRGELVQLDGRLGVEVAQWLG 290 >UniRef50_P74860 Secretion system apparatus protein ssaQ n=37 Tax=Salmonella enterica RepID=SSAQ_SALTY Length = 322 Score = 79.5 bits (195), Expect = 3e-14, Method: Composition-based stats. Identities = 24/89 (26%), Positives = 44/89 (49%), Gaps = 1/89 (1%) Query: 36 ETVFQQFGGGDVSGTLQDIDLIMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGE 95 ET+ S ++ + IP ++ E+GR + I +L +L G V+ + G Sbjct: 227 ETLLASGSPMSKSDGTSSVE-LEQIPQQVLFEVGRASLEIGQLRQLKTGDVLPVGGCFAP 285 Query: 96 PLDILINGYLIAQGEVVVVADKYGVRITD 124 + I +N +I QGE++ +++ VRIT Sbjct: 286 EVTIRVNDRIIGQGELIACGNEFMVRITR 314 >UniRef50_Q01PQ3 Surface presentation of antigens (SPOA) protein n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q01PQ3_SOLUE Length = 82 Score = 79.5 bits (195), Expect = 3e-14, Method: Composition-based stats. Identities = 31/76 (40%), Positives = 47/76 (61%) Query: 49 GTLQDIDLIMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQ 108 +++ + D+PV + VEL R MT +++L+L +G V+ AGE +DI I G L Sbjct: 2 TPKEEVAPLGDVPVDIEVELDRRIMTTRDVLQLEEGCVIGTSRSAGENIDIYIGGVLCGS 61 Query: 109 GEVVVVADKYGVRITD 124 GE+VV+ + GVRITD Sbjct: 62 GEIVVIENTLGVRITD 77 >UniRef50_D1B6B3 Flagellar motor switch protein FliM n=1 Tax=Thermanaerovibrio acidaminovorans DSM 6589 RepID=D1B6B3_THEAS Length = 335 Score = 79.5 bits (195), Expect = 3e-14, Method: Composition-based stats. Identities = 23/107 (21%), Positives = 52/107 (48%), Gaps = 1/107 (0%) Query: 27 KSTSSKSAAETVFQQFGGGDVSGTLQDIDL-IMDIPVKLTVELGRTRMTIKELLRLTQGS 85 + K +++ F G +V G + I+ + + V + +ELG T +++ ++L+L +G Sbjct: 223 EPMIDKLSSQHWFASTGRKNVEGAREIIEARLSKVAVPVALELGHTVLSLGDVLQLREGD 282 Query: 86 VVALDGLAGEPLDILINGYLIAQGEVVVVADKYGVRITDIITPSERM 132 V+ LD +PL + + + E Y R+ ++++ E + Sbjct: 283 VIRLDAKTSDPLGLRVGNRVKFLCEAGSFNKHYAARVLEVLSSEEGL 329 >UniRef50_UPI00016A9827 RhcQ protein n=2 Tax=Burkholderia oklahomensis RepID=UPI00016A9827 Length = 104 Score = 79.5 bits (195), Expect = 3e-14, Method: Composition-based stats. Identities = 24/95 (25%), Positives = 41/95 (43%) Query: 31 SKSAAETVFQQFGGGDVSGTLQDIDLIMDIPVKLTVELGRTRMTIKELLRLTQGSVVALD 90 + +++ +F D L+ DIP+ L +GR R T+ EL +T G V+ L Sbjct: 6 DSAQSQSDEPRFEQEPSRNGKADPSLLDDIPISLMFVVGRLRTTLGELRSMTPGDVLELG 65 Query: 91 GLAGEPLDILINGYLIAQGEVVVVADKYGVRITDI 125 + I +G I GE V + + V + + Sbjct: 66 RNPHGQVSIEAHGVTIGYGEFVEIGSRVAVELIRM 100 >UniRef50_Q0C5L8 Putative flagellar motor switch protein FliN n=1 Tax=Hyphomonas neptunium ATCC 15444 RepID=Q0C5L8_HYPNA Length = 99 Score = 79.1 bits (194), Expect = 4e-14, Method: Composition-based stats. Identities = 33/94 (35%), Positives = 53/94 (56%), Gaps = 1/94 (1%) Query: 37 TVFQQFGGGDVSGTLQDIDLIMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEP 96 T F D SG I +PV +TV +G+ R++++E+L L SV+AL +P Sbjct: 2 TEFDGQDRRDPSGRNSYRRSIYSVPVTVTVSIGQKRLSVQEILELQPDSVIALSSKVDDP 61 Query: 97 LDILINGYLIAQGEVVVVAD-KYGVRITDIITPS 129 +D+ I+ LIA+GE+V D + V+I +II + Sbjct: 62 VDLFIDDKLIAKGELVETDDGQIAVKIVEIIEKA 95 >UniRef50_B2Q5J4 Putative uncharacterized protein n=1 Tax=Providencia stuartii ATCC 25827 RepID=B2Q5J4_PROST Length = 308 Score = 79.1 bits (194), Expect = 4e-14, Method: Composition-based stats. Identities = 24/108 (22%), Positives = 53/108 (49%), Gaps = 5/108 (4%) Query: 26 QKSTSSKSAAETVFQQFGGGDVSGTLQDIDLIMDIPVKLTVELGRTRMTIKELLRLTQGS 85 +++ + + + Q+ D D++ + +KLT LG+T +T+ EL + G+ Sbjct: 202 EETIAPIADESALLQEETFSDEVVKPFDVNA---MTIKLTFVLGQTEITLNELADIQPGA 258 Query: 86 VVALDGLAGEPLDILINGYLIAQGEVVVVA--DKYGVRITDIITPSER 131 V ++ + + N LIA+GE++ + D+ G+ IT + ++ Sbjct: 259 VYSIGENKEREVKVYANKQLIAEGELIYIGESDELGLEITRLAHLGDK 306 >UniRef50_UPI00016C4201 hypothetical protein GobsU_09164 n=1 Tax=Gemmata obscuriglobus UQM 2246 RepID=UPI00016C4201 Length = 117 Score = 79.1 bits (194), Expect = 4e-14, Method: Composition-based stats. Identities = 33/110 (30%), Positives = 56/110 (50%) Query: 19 WAEALSEQKSTSSKSAAETVFQQFGGGDVSGTLQDIDLIMDIPVKLTVELGRTRMTIKEL 78 AE + A + F + +G ++ + D+P+ +T LGR + I E+ Sbjct: 1 MAETTPTDPADPGVVARQAEFPRLEPRAGTGPGSTLESLRDVPITITARLGRAVLPIGEI 60 Query: 79 LRLTQGSVVALDGLAGEPLDILINGYLIAQGEVVVVADKYGVRITDIITP 128 L L GSVV L+ + P+++ + G A GEVVVV + + VRI +++ P Sbjct: 61 LTLGPGSVVELEEVISAPVELTVRGVPFAVGEVVVVGEHFAVRIKNLLPP 110 >UniRef50_A6Q2N5 Flagellar motor switch protein FliN/FliY n=1 Tax=Nitratiruptor sp. SB155-2 RepID=A6Q2N5_NITSB Length = 83 Score = 79.1 bits (194), Expect = 4e-14, Method: Composition-based stats. Identities = 32/81 (39%), Positives = 50/81 (61%) Query: 45 GDVSGTLQDIDLIMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGY 104 G D L+ DI +K++V LG T+ I E+L L +G V+ L+ + +D+++N Sbjct: 2 EKEIGEQVDFSLLEDISLKMSVRLGSTKKMIIEILSLKEGDVIELERNTEDYIDVMLNEK 61 Query: 105 LIAQGEVVVVADKYGVRITDI 125 +A GE+VV+ DKYGVRI D+ Sbjct: 62 KMAIGEIVVINDKYGVRIVDL 82 >UniRef50_B1K4V5 Type III secretion system apparatus protein YscQ/HrcQ n=1 Tax=Burkholderia cenocepacia MC0-3 RepID=B1K4V5_BURCC Length = 364 Score = 78.7 bits (193), Expect = 5e-14, Method: Composition-based stats. Identities = 22/104 (21%), Positives = 42/104 (40%), Gaps = 5/104 (4%) Query: 28 STSSKSAAETVFQQFGGGDVSGTLQDIDLIMDIPVKLTVELGRTRMTIKELLRLTQGSVV 87 T G D + ++ + ++ E+ + + +L L G V+ Sbjct: 263 DTEPAMTDRNDHPVPGAPDAETQTS----LDELELPVSFEIETVTLPLAQLSALRPGYVI 318 Query: 88 ALDGLAGEP-LDILINGYLIAQGEVVVVADKYGVRITDIITPSE 130 L G + + +L G LI GE+V V ++ GVR+ D+ + Sbjct: 319 ELRGTLRDARIRLLAYGQLIGIGELVTVGEQLGVRVIDVFGSHD 362 >UniRef50_A3NFV2 Flagellar motor switch/type III secretory pathway protein n=9 Tax=Betaproteobacteria RepID=A3NFV2_BURP6 Length = 115 Score = 78.7 bits (193), Expect = 5e-14, Method: Composition-based stats. Identities = 30/76 (39%), Positives = 49/76 (64%) Query: 50 TLQDIDLIMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQG 109 L+ IPV+LT+E+G +++ EL+ + +G+V+ LD LAGEPL + +NG + Sbjct: 32 RRDPRQLLAKIPVQLTLEVGTATVSLAELMNIDEGTVLELDRLAGEPLLVKVNGTTVGHA 91 Query: 110 EVVVVADKYGVRITDI 125 EVVV + YG++I D+ Sbjct: 92 EVVVSGENYGLKIIDL 107 >UniRef50_B6WRL8 Putative uncharacterized protein n=1 Tax=Desulfovibrio piger ATCC 29098 RepID=B6WRL8_9DELT Length = 398 Score = 78.7 bits (193), Expect = 5e-14, Method: Composition-based stats. Identities = 37/125 (29%), Positives = 57/125 (45%), Gaps = 10/125 (8%) Query: 2 SDMNNPADDNNGAMDDLWAEALSEQKSTSSKSAAETVFQQFGGGDVSGTLQDIDLIMDIP 61 DM +P + AE SE + + A V Q G S T++ + + Sbjct: 263 PDMGDPGREP--------AEKGSEDGMSEERLAPTGVVQSDGAAAESATVEPAS-VGALE 313 Query: 62 VKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEP-LDILINGYLIAQGEVVVVADKYGV 120 + + E+GR + + EL L G +AL G P +DI + G L+AQG +V V GV Sbjct: 314 LPVVFEIGRLHLRLDELAALVPGHTLALGGETPSPVVDIRVAGQLLAQGRLVDVGGIPGV 373 Query: 121 RITDI 125 +IT + Sbjct: 374 QITRM 378 >UniRef50_Q0ANV1 Surface presentation of antigens (SPOA) protein n=3 Tax=Alphaproteobacteria RepID=Q0ANV1_MARMM Length = 99 Score = 78.4 bits (192), Expect = 6e-14, Method: Composition-based stats. Identities = 27/71 (38%), Positives = 47/71 (66%) Query: 53 DIDLIMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQGEVV 112 D+ I + V+++V LGR++M I++ LR+ +G+V+ LD + + IL N + IA+G+VV Sbjct: 17 DVSQISSVEVEISVLLGRSKMPIQQFLRMGRGAVIPLDSGEDDQVWILANNHPIARGDVV 76 Query: 113 VVADKYGVRIT 123 + D+ V IT Sbjct: 77 IQGDRIAVSIT 87 >UniRef50_C6CGS2 Type III secretion system apparatus protein YscQ/HrcQ n=2 Tax=Dickeya RepID=C6CGS2_DICZE Length = 387 Score = 78.4 bits (192), Expect = 6e-14, Method: Composition-based stats. Identities = 20/94 (21%), Positives = 43/94 (45%), Gaps = 2/94 (2%) Query: 33 SAAETVFQQFGGGDVSGTLQDID--LIMDIPVKLTVELGRTRMTIKELLRLTQGSVVALD 90 ++ + + ++G D + + + + LTV G +T+++L +L G+V+ L Sbjct: 280 ASEASPYAEYGAPDGDNPAGALSGYALPPLTLALTVRCGYLTLTLQDLQQLAPGTVLTLQ 339 Query: 91 GLAGEPLDILINGYLIAQGEVVVVADKYGVRITD 124 + +A GE+V V + G++IT Sbjct: 340 QATPGEATLYHGEQPLALGELVDVEGRLGLQITR 373 >UniRef50_A4XNA3 Surface presentation of antigens (SPOA) protein n=1 Tax=Pseudomonas mendocina ymp RepID=A4XNA3_PSEMY Length = 133 Score = 78.4 bits (192), Expect = 6e-14, Method: Composition-based stats. Identities = 25/125 (20%), Positives = 57/125 (45%), Gaps = 5/125 (4%) Query: 8 ADDNNGAMDDLWAEALSE-----QKSTSSKSAAETVFQQFGGGDVSGTLQDIDLIMDIPV 62 + ++ M ++ A+AL E + + + + I +P+ Sbjct: 7 SQESLQEMAEMDADALPEGFEERPGEMHLEGQEFAPQDEHASAVEPQQMAALGSIAHLPL 66 Query: 63 KLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQGEVVVVADKYGVRI 122 +LT+ G+ +++ +L +L GSV+ + G+A + ++ +GE+V V + G++I Sbjct: 67 QLTLRCGQLTLSVDQLRQLGSGSVLEIHGVAPGHATLCHGERVVGEGELVDVDGRLGLQI 126 Query: 123 TDIIT 127 T + T Sbjct: 127 TRMAT 131 >UniRef50_A7HWV0 Surface presentation of antigens (SPOA) protein n=1 Tax=Parvibaculum lavamentivorans DS-1 RepID=A7HWV0_PARL1 Length = 78 Score = 78.4 bits (192), Expect = 7e-14, Method: Composition-based stats. Identities = 24/77 (31%), Positives = 48/77 (62%) Query: 54 IDLIMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQGEVVV 113 ++ + ++ V+L+V LG++ M I +LL++ +G+V+ L E + +L N IA+GE++V Sbjct: 1 MNSVNNVFVELSVVLGKSTMPIHQLLKMGRGAVIELGTRQDEEIWVLANNVPIARGEIIV 60 Query: 114 VADKYGVRITDIITPSE 130 ++ V IT ++ E Sbjct: 61 QGERVAVSITTVLAGGE 77 >UniRef50_A1TJB9 Type III secretion system apparatus protein YscQ/HrcQ n=4 Tax=Acidovorax RepID=A1TJB9_ACIAC Length = 352 Score = 78.0 bits (191), Expect = 8e-14, Method: Composition-based stats. Identities = 29/119 (24%), Positives = 51/119 (42%), Gaps = 2/119 (1%) Query: 6 NPADDNNGAMDDLWAEALSEQKSTSSKSAAETVFQ-QFGGGDVSGTLQDIDLIMDIPVKL 64 + + D +AE E + AAE + T + I I V + Sbjct: 217 SEIALHAAPQADAFAEPADEDGAPDPAGAAEEAAPCSGSDAEPEATPLPLTDIGGIRVPV 276 Query: 65 TVELGRTRMTIKELLRLTQGSVVALDGLAGEP-LDILINGYLIAQGEVVVVADKYGVRI 122 +E+ R+ + EL L G++V L A + + ++ +G ++ G +VV+ D GVRI Sbjct: 277 AIEIDTARIRLDELAALDAGAIVPLAVAARDATVRLVCHGQVVGTGRLVVIGDHLGVRI 335 >UniRef50_A0NWB8 Putative uncharacterized protein n=3 Tax=Rhodobacteraceae RepID=A0NWB8_9RHOB Length = 88 Score = 78.0 bits (191), Expect = 8e-14, Method: Composition-based stats. Identities = 25/83 (30%), Positives = 49/83 (59%) Query: 54 IDLIMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQGEVVV 113 + +I V ++V LG M + +LLR+ +G+V+ LD E + I N L+A+G+VV+ Sbjct: 1 MTTFDEIKVDISVVLGENEMPVHQLLRMGRGAVIDLDVAEDEDVKIYANNTLVAKGQVVL 60 Query: 114 VADKYGVRITDIITPSERMRRLS 136 + ++ G+ IT+++ +R + Sbjct: 61 LGERIGISITEVLMRPPDIRPMR 83 >UniRef50_UPI0001C312B8 CheC, inhibitor of MCP methylation n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C312B8 Length = 301 Score = 78.0 bits (191), Expect = 9e-14, Method: Composition-based stats. Identities = 29/91 (31%), Positives = 50/91 (54%), Gaps = 1/91 (1%) Query: 40 QQFGGGDVSGTLQDIDLIMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDI 99 G GDV + D + DI V++ ELGRTR+ + + + GSV+ LD A +P+D+ Sbjct: 196 SDGGEGDVHEQVALDDALRDIRVRVWAELGRTRVPLGQAPDMPAGSVLELDRKADDPVDL 255 Query: 100 LINGYLIAQGEVVVVAD-KYGVRITDIITPS 129 +NG A G +V+ D ++ +R+ ++ Sbjct: 256 YVNGLRFASGTLVLTDDGEWALRLAEVAGRD 286 >UniRef50_A2S1D1 Type III secretion inner membrane protein SctQ n=66 Tax=Burkholderia RepID=A2S1D1_BURM9 Length = 645 Score = 78.0 bits (191), Expect = 9e-14, Method: Composition-based stats. Identities = 25/133 (18%), Positives = 49/133 (36%), Gaps = 9/133 (6%) Query: 6 NPADDNNGAMDDLWAEALSEQKSTSSKSAAETVFQQFGGGDVSGTLQDIDL--------I 57 +PA + A+ + + S+ ++ G + + Sbjct: 510 SPAAVPAEFPAEFPADRAGDLPAPSAAHSSPGSLAGLPAGLQADAPPRDARYAAPEPADL 569 Query: 58 MDIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGE-PLDILINGYLIAQGEVVVVAD 116 ++ + + VE+ ++I EL L G V+ L A + P+ ++ G I G +V V Sbjct: 570 GEVALPVHVEIDTLSLSIAELAALRPGYVLELPLAARDVPVRLVAYGQAIGGGRLVAVGA 629 Query: 117 KYGVRITDIITPS 129 GVRI + Sbjct: 630 HLGVRIDRMAGDD 642 >UniRef50_Q56022 Surface presentation of antigens protein spaO n=52 Tax=Salmonella enterica RepID=SPAO_SALTI Length = 303 Score = 77.6 bits (190), Expect = 1e-13, Method: Composition-based stats. Identities = 24/88 (27%), Positives = 45/88 (51%) Query: 42 FGGGDVSGTLQDIDLIMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILI 101 + + T + + + +PVKL L R +T+ EL + Q +++L ++I+ Sbjct: 212 EEENNTTETAETLPGLNQLPVKLEFVLYRKNVTLAELEAMGQQQLLSLPTNVELNVEIMA 271 Query: 102 NGYLIAQGEVVVVADKYGVRITDIITPS 129 NG L+ GE+V + D GV I + ++ S Sbjct: 272 NGVLLGNGELVQMNDTLGVEIHEWLSES 299 >UniRef50_Q1IR63 Flagellar motor switch FliN n=1 Tax=Candidatus Koribacter versatilis Ellin345 RepID=Q1IR63_ACIBL Length = 252 Score = 77.6 bits (190), Expect = 1e-13, Method: Composition-based stats. Identities = 25/66 (37%), Positives = 44/66 (66%) Query: 65 TVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQGEVVVVADKYGVRITD 124 T+ G+ M ++++L L GSVV LD +P+++L++G +IA+G VVVV YG+R+ + Sbjct: 186 TLRFGQREMLLQDILELQSGSVVELDREIQDPVELLLDGRVIARGSVVVVDGNYGLRVAE 245 Query: 125 IITPSE 130 + +E Sbjct: 246 VGAFAE 251 >UniRef50_D2TXN7 Type III secretion component protein SctQ n=1 Tax=Arsenophonus nasoniae RepID=D2TXN7_9ENTR Length = 325 Score = 77.6 bits (190), Expect = 1e-13, Method: Composition-based stats. Identities = 16/97 (16%), Positives = 44/97 (45%) Query: 33 SAAETVFQQFGGGDVSGTLQDIDLIMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDGL 92 S+ + + Q + + +I + + E+GR + ++ L L++GS++ L Sbjct: 203 SSHQLELINMYSETDNLANQSLTNLEEIQIPIRFEVGRQYIELQALTHLSEGSLIDLAVP 262 Query: 93 AGEPLDILINGYLIAQGEVVVVADKYGVRITDIITPS 129 + I+ N + G++V + + G+++ ++ Sbjct: 263 VNGDVRIIANQQPLGTGQLVEIQGRLGIKVVELFAKK 299 >UniRef50_C0QPA3 Flagellar motor switch phosphatase FliY n=1 Tax=Persephonella marina EX-H1 RepID=C0QPA3_PERMH Length = 79 Score = 77.6 bits (190), Expect = 1e-13, Method: Composition-based stats. Identities = 24/77 (31%), Positives = 45/77 (58%) Query: 49 GTLQDIDLIMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQ 108 DI + D+ VK+T E+GR + E++ L +G ++ LD + +++ + L A Sbjct: 2 SQEHDISFLKDVTVKVTGEVGRVKKLFIEIITLKEGDIIKLDKHIEDYVELYVKDQLFAV 61 Query: 109 GEVVVVADKYGVRITDI 125 GE++V +KYG+R+ D+ Sbjct: 62 GELIVANEKYGIRVVDL 78 >UniRef50_B1T0N2 Type III secretion system apparatus protein YscQ/HrcQ n=1 Tax=Burkholderia ambifaria MEX-5 RepID=B1T0N2_9BURK Length = 377 Score = 77.6 bits (190), Expect = 1e-13, Method: Composition-based stats. Identities = 22/102 (21%), Positives = 39/102 (38%), Gaps = 5/102 (4%) Query: 30 SSKSAAETVFQQFGGGDVSGTLQDIDLIMDIPVKLTVELGRTRMTIKELLRLTQGSVVAL 89 A E D + + I + V + E+ + I +L + QG V+ L Sbjct: 277 DPFMANEADHPGNDTPDRNDPV----AIGALEVPVNFEIDTVALPIDQLAAMRQGYVIEL 332 Query: 90 DGLAGE-PLDILINGYLIAQGEVVVVADKYGVRITDIITPSE 130 + + + + +I GE+V V D GVRI + + Sbjct: 333 SRTTSDMQVRLTAHSQVIGHGELVSVGDHLGVRILQMAQRDD 374 >UniRef50_C7DF35 Flagellar motor switch protein FliN n=1 Tax=Thalassiobium sp. R2A62 RepID=C7DF35_9RHOB Length = 94 Score = 77.6 bits (190), Expect = 1e-13, Method: Composition-based stats. Identities = 30/90 (33%), Positives = 53/90 (58%), Gaps = 4/90 (4%) Query: 49 GTLQDIDLIMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQ 108 + D D+P+++T+ +GRT T++ELL L + +++ LD +P+DI + LIA+ Sbjct: 5 PSQNDGPNFSDVPIEVTISIGRTHPTVRELLDLNENAILVLDKNIQDPVDIFVGDKLIAR 64 Query: 109 GEVVVVAD----KYGVRITDIITPSERMRR 134 GE+ + D + VR+T+II P R+ Sbjct: 65 GELQELEDTNISQLAVRLTEIIDPPSGSRK 94 >UniRef50_Q8GKQ6 FliM (Fragment) n=1 Tax=Fervidobacterium sp. YNP RepID=Q8GKQ6_9THEM Length = 165 Score = 77.2 bits (189), Expect = 1e-13, Method: Composition-based stats. Identities = 21/105 (20%), Positives = 45/105 (42%), Gaps = 1/105 (0%) Query: 27 KSTSSKSAAETVFQQFGGGDVSGTLQDI-DLIMDIPVKLTVELGRTRMTIKELLRLTQGS 85 + K ++ F+ ++ + + + + + +G T +T+ E+L L G Sbjct: 57 EPIGEKLTTQSWFKVKQKEITEEHIEKLKENLQRTKIDVIAIIGETVLTLGEILTLEVGD 116 Query: 86 VVALDGLAGEPLDILINGYLIAQGEVVVVADKYGVRITDIITPSE 130 V+ L EP+ + +NG G+ Y V+IT++I + Sbjct: 117 VIRLKEHYDEPIRVEVNGRTKFLGKPGQYKGNYAVKITEVIEEPK 161 >UniRef50_Q3JLG5 SctQ n=18 Tax=pseudomallei group RepID=Q3JLG5_BURP1 Length = 435 Score = 76.8 bits (188), Expect = 2e-13, Method: Composition-based stats. Identities = 22/100 (22%), Positives = 42/100 (42%), Gaps = 1/100 (1%) Query: 30 SSKSAAETVFQQFGGGDVSGTLQDIDLIMDIPVKLTVELGRTRMTIKELLRLTQGSVVAL 89 S + + Q G T + I ++ + + E+ + I +L L G V+ L Sbjct: 331 SKELSMSEEVDQASAGLGVVTTDEPTRIGELELPVQFEIDTVSLPIDQLSALEPGYVIEL 390 Query: 90 DGLAGEP-LDILINGYLIAQGEVVVVADKYGVRITDIITP 128 + L ++++G + GE+V V + GVRI + Sbjct: 391 PVAVTDARLRLVVHGQTVGYGELVAVGEHLGVRIIRMAHR 430 >UniRef50_B4R925 FliN family protein n=8 Tax=Alphaproteobacteria RepID=B4R925_PHEZH Length = 108 Score = 76.8 bits (188), Expect = 2e-13, Method: Composition-based stats. Identities = 22/79 (27%), Positives = 46/79 (58%) Query: 46 DVSGTLQDIDLIMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYL 105 ++ + + + + V++ V LGR + +++LLR+ +G+V+ LD E + IL N + Sbjct: 18 PLAWSDPSVSQVKAVNVEIQVVLGRASLPMQQLLRMGRGAVIPLDATVNEEVWILANNHP 77 Query: 106 IAQGEVVVVADKYGVRITD 124 +A+GE+ + DK + +T Sbjct: 78 VARGEIQISDDKIAIAVTR 96 Database: uniref50.fasta Posted date: Mar 8, 2010 10:38 AM Number of letters in database: 1,040,396,356 Number of sequences in database: 3,077,464 Lambda K H 0.308 0.155 0.374 Lambda K H 0.267 0.0476 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 786,065,524 Number of Sequences: 3077464 Number of extensions: 36168622 Number of successful extensions: 94059 Number of sequences better than 1.0e-01: 250 Number of HSP's better than 0.1 without gapping: 1113 Number of HSP's successfully gapped in prelim test: 129 Number of HSP's that attempted gapping in prelim test: 92654 Number of HSP's gapped (non-prelim): 1372 length of query: 137 length of database: 1,040,396,356 effective HSP length: 102 effective length of query: 35 effective length of database: 726,495,028 effective search space: 25427325980 effective search space used: 25427325980 T: 11 A: 40 X1: 16 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (20.9 bits) S2: 87 (37.9 bits)