Phyre 2 alignment of P15070 with c3fcgB_

Return to main results | Retrieve Phyre Job Id

Job Description | P15070
Confidence | 8.09% | Date | Thu Jan 5 11:34:34 GMT 2012
Rank | 60 | Aligned Residues | 15
% Identity | 27% | Template | c3fcgB_
PDB info | PDB header:membrane protein, protein transport | Chain: B: PDB Molecule:f1 capsule-anchoring protein; | PDBTitle: crystal structure analysis of the middle domain of the2 caf1a usher
Resolution | 2.85 Å

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 97 | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | L | D | I | L | I | N | G | Y | L | I | A | Q | G | E | V
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | V | E | V | L | R | D | G | Y | T | V | S | N | E | L | V
Template Known Secondary structure |  |  |  |  |  |  | T | T |  |  |  |  |  |  |  |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 259 | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys |
Disclaimer
Terms and Conditions