Phyre 2 alignment of P15070 with d4fiva_

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Job Description | P15070
Confidence | 10.93% | Date | Thu Jan 5 11:34:34 GMT 2012
Rank | 41 | Aligned Residues | 26
% Identity | 27% | Template | d4fiva_
SCOP info | Acid proteases | Acid proteases | Retroviral protease (retropepsin)
Resolution | 1.80

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

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Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | Q | G | S | V | V | A | L | D | G | L | A | G | E | P | L | D | I | L | I | N | G | Y | L | I | A | Q | G | E | V
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |
Template Sequence |  | V | G | T | T | T | T | L | E | K | R | . | . | P | E | I | L | I | F | V | N | G | Y | P | I | . | K | F | L | L
Template Known Secondary structure |  |  |  | S |  |  |  | S | S | S |  | . | . |  |  |  |  |  |  |  | T | T |  |  |  | . |  |  |  |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 4 | . | . | . | . | . | 10 | . | . | . |  |  | . | . | . | . | . | . | 20 | . | . | . | . | . |  | . | . | . | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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