Phyre 2 Results for P15070

Email | l.a.kelley@imperial.ac.uk
Description | P15070
Date | Thu Jan 5 11:34:34 GMT 2012
Unique Job ID | f48f842527985c7d

Detailed template information |

# | Template | Alignment Coverage | 3D Model | Confidence | % i.d. | Template Information
--- | --- | --- | --- | --- | --- | ---
1 | d1o6aa_ |
|  | 99.9 | 55 | Fold:Surface presentation of antigens (SPOA) Superfamily:Surface presentation of antigens (SPOA) Family:Surface presentation of antigens (SPOA)
2 | d1o9ya_ |
|  | 99.8 | 27 | Fold:Surface presentation of antigens (SPOA) Superfamily:Surface presentation of antigens (SPOA) Family:Surface presentation of antigens (SPOA)
3 | c2k5fA_ |
|  | 58.6 | 29 | PDB header:metal transport Chain: A: PDB Molecule:ferrous iron transport protein a; PDBTitle: solution nmr structure of feoa protein from chlorobium2 tepidum. northeast structural genomics consortium target3 ctr121
4 | d2gcxa1 |
|  | 56.8 | 23 | Fold:SH3-like barrel Superfamily:C-terminal domain of transcriptional repressors Family:FeoA-like
5 | c2k5lA_ |
|  | 46.5 | 26 | PDB header:structural genomics, unknown function Chain: A: PDB Molecule:feoa; PDBTitle: solution nmr structure of protein feoa from clostridium2 thermocellum, northeast structural genomics consortium3 target cmr17
6 | c2k4yA_ |
|  | 46.1 | 23 | PDB header:metal transport Chain: A: PDB Molecule:feoa-like protein; PDBTitle: nmr structure of feoa-like protein from clostridium2 acetobutylicum: northeast structural genomics consortium3 target car178
7 | c3mhxB_ |
|  | 32.6 | 27 | PDB header:metal transport Chain: B: PDB Molecule:putative ferrous iron transport protein a; PDBTitle: crystal structure of stenotrophomonas maltophilia feoa complexed with2 zinc: a unique procaryotic sh3 domain protein possibly acting as a3 bacterial ferrous iron transport activating factor
8 | c2k5iA_ |
|  | 32.1 | 19 | PDB header:metal transport Chain: A: PDB Molecule:iron transport protein; PDBTitle: solution structure of iron(ii) transport protein a from2 clostridium thermocellum , northeast structural genomics3 consortium (nesg) target vr131
9 | c3gt2A_ |
|  | 29.5 | 17 | PDB header:unknown function Chain: A: PDB Molecule:putative uncharacterized protein; PDBTitle: crystal structure of the p60 domain from m. avium2 paratuberculosis antigen map1272c
10 | d3bwud1 |
|  | 26.5 | 21 | Fold:FimD N-terminal domain-like Superfamily:FimD N-terminal domain-like Family:Usher N-domain
11 | d1m5q1_ |
|  | 26.3 | 13 | Fold:Sm-like fold Superfamily:Sm-like ribonucleoproteins Family:Sm motif of small nuclear ribonucleoproteins, SNRNP
12 | d1wmxb_ |
|  | 24.4 | 11 | Fold:Galactose-binding domain-like Superfamily:Galactose-binding domain-like Family:Family 30 carbohydrate binding module, CBM30 (PKD repeat)
13 | d1zdva1 |
|  | 24.0 | 31 | Fold:FimD N-terminal domain-like Superfamily:FimD N-terminal domain-like Family:Usher N-domain
14 | c3ddyA_ |
|  | 23.5 | 19 | PDB header:luminescent protein Chain: A: PDB Molecule:lumazine protein; PDBTitle: structure of lumazine protein, an optical transponder of luminescent2 bacteria
15 | d2h3ja1 |
|  | 23.3 | 17 | Fold:SH3-like barrel Superfamily:C-terminal domain of transcriptional repressors Family:FeoA-like
16 | c2glvA_ |
|  | 22.0 | 21 | PDB header:lyase Chain: A: PDB Molecule:(3r)-hydroxymyristoyl-acyl carrier protein PDBTitle: crystal structure of (3r)-hydroxyacyl-acyl carrier protein2 dehydratase(fabz) mutant(y100a) from helicobacter pylori
17 | c2e63A_ |
|  | 20.8 | 23 | PDB header:structural genomics, unknown function Chain: A: PDB Molecule:kiaa1787 protein; PDBTitle: solution structure of the neuz domain in kiaa1787 protein
18 | c2fg0B_ |
|  | 20.3 | 11 | PDB header:hydrolase Chain: B: PDB Molecule:cog0791: cell wall-associated hydrolases (invasion- PDBTitle: crystal structure of a putative gamma-d-glutamyl-l-diamino acid2 endopeptidase (npun_r0659) from nostoc punctiforme pcc 73102 at 1.793 a resolution
19 | d2evra2 |
|  | 20.1 | 11 | Fold:Cysteine proteinases Superfamily:Cysteine proteinases Family:NlpC/P60
20 | c3e19D_ |
|  | 19.2 | 26 | PDB header:transcription regulator, metal binding p Chain: D: PDB Molecule:feoa; PDBTitle: crystal structure of iron uptake regulatory protein (feoa) solved by2 sulfur sad in a monoclinic space group
21 | d2isba1 |
| not modelled | 19.0 | 33 | Fold:The "swivelling" beta/beta/alpha domain Superfamily:FumA C-terminal domain-like Family:FumA C-terminal domain-like
22 | c2kytA_ |
| not modelled | 17.9 | 7 | PDB header:hydrolase Chain: A: PDB Molecule:group xvi phospholipase a2; PDBTitle: solution struture of the h-rev107 n-terminal domain
23 | d1zdxa1 |
| not modelled | 17.8 | 26 | Fold:FimD N-terminal domain-like Superfamily:FimD N-terminal domain-like Family:Usher N-domain
24 | c3pbiA_ |
| not modelled | 17.3 | 15 | PDB header:hydrolase Chain: A: PDB Molecule:invasion protein; PDBTitle: structure of the peptidoglycan hydrolase ripb (rv1478) from2 mycobacterium tuberculosis at 1.6 resolution
25 | c2xivA_ |
| not modelled | 15.9 | 19 | PDB header:structural protein Chain: A: PDB Molecule:hypothetical invasion protein; PDBTitle: structure of rv1477, hypothetical invasion protein of2 mycobacterium tuberculosis
26 | c1i8dB_ |
| not modelled | 15.3 | 18 | PDB header:transferase Chain: B: PDB Molecule:riboflavin synthase; PDBTitle: crystal structure of riboflavin synthase
27 | c3hruA_ |
| not modelled | 15.2 | 16 | PDB header:transcription Chain: A: PDB Molecule:metalloregulator scar; PDBTitle: crystal structure of scar with bound zn2+
28 | c3cw1D_ |
| not modelled | 14.9 | 16 | PDB header:splicing Chain: D: PDB Molecule:small nuclear ribonucleoprotein sm d3; PDBTitle: crystal structure of human spliceosomal u1 snrnp
29 | c2gl0A_ |
| not modelled | 14.9 | 22 | PDB header:transferase Chain: A: PDB Molecule:conserved hypothetical protein; PDBTitle: structure of pae2307 in complex with adenosine
30 | d1u1za_ |
| not modelled | 14.7 | 6 | Fold:Thioesterase/thiol ester dehydrase-isomerase Superfamily:Thioesterase/thiol ester dehydrase-isomerase Family:FabZ-like
31 | d1vgga_ |
| not modelled | 14.6 | 16 | Fold:Ta1353-like Superfamily:Ta1353-like Family:Ta1353-like
32 | c2d16B_ |
| not modelled | 14.3 | 16 | PDB header:structural genomics, unknown function Chain: B: PDB Molecule:hypothetical protein ph1918; PDBTitle: crystal structure of ph1918 protein from pyrococcus horikoshii ot3
33 | c2ekmC_ |
| not modelled | 14.2 | 23 | PDB header:structural genomics, unknown function Chain: C: PDB Molecule:hypothetical protein st1511; PDBTitle: structure of st1219 protein from sulfolobus tokodaii
34 | c3swnC_ |
| not modelled | 13.6 | 10 | PDB header:rna binding protein Chain: C: PDB Molecule:u6 snrna-associated sm-like protein lsm7; PDBTitle: structure of the lsm657 complex: an assembly intermediate of the lsm12 7 and lsm2 8 rings
35 | d1i4k1_ |
| not modelled | 13.2 | 14 | Fold:Sm-like fold Superfamily:Sm-like ribonucleoproteins Family:Sm motif of small nuclear ribonucleoproteins, SNRNP
36 | d1vyua1 |
| not modelled | 12.6 | 6 | Fold:SH3-like barrel Superfamily:SH3-domain Family:SH3-domain
37 | c3cw15_ |
| not modelled | 12.0 | 19 | PDB header:splicing Chain: 5: PDB Molecule:small nuclear ribonucleoprotein g; PDB Fragment:residues 1-215; PDBTitle: crystal structure of human spliceosomal u1 snrnp
38 | d2je8a4 |
| not modelled | 11.8 | 15 | Fold:Galactose-binding domain-like Superfamily:Galactose-binding domain-like Family:beta-Galactosidase/glucuronidase, N-terminal domain
39 | d1t0ha_ |
| not modelled | 11.7 | 12 | Fold:SH3-like barrel Superfamily:SH3-domain Family:SH3-domain
40 | c2glwA_ |
| not modelled | 11.5 | 14 | PDB header:transcription Chain: A: PDB Molecule:92aa long hypothetical protein; PDBTitle: the solution structure of phs018 from pyrococcus horikoshii
41 | d4fiva_ |
| not modelled | 10.9 | 27 | Fold:Acid proteases Superfamily:Acid proteases Family:Retroviral protease (retropepsin)
42 | c2pn0D_ |
| not modelled | 10.6 | 31 | PDB header:transcription Chain: D: PDB Molecule:prokaryotic transcription elongation factor PDBTitle: prokaryotic transcription elongation factor grea/greb from2 nitrosomonas europaea
43 | d2as0a1 |
| not modelled | 10.6 | 23 | Fold:PUA domain-like Superfamily:PUA domain-like Family:Hypothetical RNA methyltransferase domain (HRMD)
44 | d1n9ra_ |
| not modelled | 10.3 | 13 | Fold:Sm-like fold Superfamily:Sm-like ribonucleoproteins Family:Sm motif of small nuclear ribonucleoproteins, SNRNP
45 | c1b34A_ |
| not modelled | 10.2 | 16 | PDB header:rna binding protein Chain: A: PDB Molecule:protein (small nuclear ribonucleoprotein sm d1); PDBTitle: crystal structure of the d1d2 sub-complex from the human snrnp core2 domain
46 | d1b34a_ |
| not modelled | 10.2 | 16 | Fold:Sm-like fold Superfamily:Sm-like ribonucleoproteins Family:Sm motif of small nuclear ribonucleoproteins, SNRNP
47 | c3a35B_ |
| not modelled | 9.9 | 17 | PDB header:luminescent protein Chain: B: PDB Molecule:lumazine protein; PDBTitle: crystal structure of lump complexed with riboflavin
48 | d2axwa1 |
| not modelled | 9.7 | 19 | Fold:Common fold of diphtheria toxin/transcription factors/cytochrome f Superfamily:Bacterial adhesins Family:Pilus subunits
49 | d1d3ba_ |
| not modelled | 9.6 | 16 | Fold:Sm-like fold Superfamily:Sm-like ribonucleoproteins Family:Sm motif of small nuclear ribonucleoproteins, SNRNP
50 | c3d37A_ |
| not modelled | 9.5 | 21 | PDB header:structural genomics, unknown function Chain: A: PDB Molecule:tail protein, 43 kda; PDBTitle: the crystal structure of the tail protein from neisseria meningitidis2 mc58
51 | d1t3la1 |
| not modelled | 9.2 | 12 | Fold:SH3-like barrel Superfamily:SH3-domain Family:SH3-domain
52 | d2fwka1 |
| not modelled | 8.9 | 13 | Fold:Sm-like fold Superfamily:Sm-like ribonucleoproteins Family:Sm motif of small nuclear ribonucleoproteins, SNRNP
53 | d1eika_ |
| not modelled | 8.9 | 14 | Fold:RPB5-like RNA polymerase subunit Superfamily:RPB5-like RNA polymerase subunit Family:RPB5
54 | c3f3bA_ |
| not modelled | 8.9 | 21 | PDB header:structural genomics, unknown function Chain: A: PDB Molecule:phage-like element pbsx protein xkdh; PDBTitle: structure of the phage-like element pbsx protein xkdh from2 bacillus subtilus. northeast structural genomics3 consortium target sr352.
55 | c1n9sH_ |
| not modelled | 8.6 | 13 | PDB header:translation Chain: H: PDB Molecule:small nuclear ribonucleoprotein f; PDBTitle: crystal structure of yeast smf in spacegroup p43212
56 | c1t0jA_ |
| not modelled | 8.5 | 12 | PDB header:signaling protein Chain: A: PDB Molecule:voltage-gated calcium channel subunit beta2a; PDBTitle: crystal structure of a complex between voltage-gated calcium channel2 beta2a subunit and a peptide of the alpha1c subunit
57 | d1hmja_ |
| not modelled | 8.4 | 16 | Fold:RPB5-like RNA polymerase subunit Superfamily:RPB5-like RNA polymerase subunit Family:RPB5
58 | d1wmxa_ |
| not modelled | 8.1 | 8 | Fold:Galactose-binding domain-like Superfamily:Galactose-binding domain-like Family:Family 30 carbohydrate binding module, CBM30 (PKD repeat)
59 | d1i8fa_ |
| not modelled | 8.1 | 11 | Fold:Sm-like fold Superfamily:Sm-like ribonucleoproteins Family:Sm motif of small nuclear ribonucleoproteins, SNRNP
60 | c3fcgB_ |
| not modelled | 8.1 | 27 | PDB header:membrane protein, protein transport Chain: B: PDB Molecule:f1 capsule-anchoring protein; PDBTitle: crystal structure analysis of the middle domain of the2 caf1a usher
61 | c3swnA_ |
| not modelled | 7.7 | 18 | PDB header:rna binding protein Chain: A: PDB Molecule:u6 snrna-associated sm-like protein lsm5; PDBTitle: structure of the lsm657 complex: an assembly intermediate of the lsm12 7 and lsm2 8 rings
62 | d1h641_ |
| not modelled | 7.6 | 8 | Fold:Sm-like fold Superfamily:Sm-like ribonucleoproteins Family:Sm motif of small nuclear ribonucleoproteins, SNRNP
63 | c1fx7C_ |
| not modelled | 7.5 | 6 | PDB header:signaling protein Chain: C: PDB Molecule:iron-dependent repressor ider; PDBTitle: crystal structure of the iron-dependent regulator (ider)2 from mycobacterium tuberculosis
64 | c1wruA_ |
| not modelled | 7.4 | 14 | PDB header:structural protein Chain: A: PDB Molecule:43 kda tail protein; PDBTitle: structure of central hub elucidated by x-ray analysis of gene product2 44; baseplate component of bacteriophage mu
65 | c3butA_ |
| not modelled | 7.3 | 38 | PDB header:structural genomics, unknown function Chain: A: PDB Molecule:uncharacterized protein af_0446; PDBTitle: crystal structure of protein af_0446 from archaeoglobus fulgidus
66 | d1dzfa2 |
| not modelled | 7.3 | 25 | Fold:RPB5-like RNA polymerase subunit Superfamily:RPB5-like RNA polymerase subunit Family:RPB5
67 | d1d1na_ |
| not modelled | 7.1 | 26 | Fold:Reductase/isomerase/elongation factor common domain Superfamily:Translation proteins Family:Elongation factors
68 | d1jz8a3 |
| not modelled | 6.8 | 17 | Fold:Galactose-binding domain-like Superfamily:Galactose-binding domain-like Family:beta-Galactosidase/glucuronidase, N-terminal domain
69 | c3h41A_ |
| not modelled | 6.7 | 14 | PDB header:hydrolase Chain: A: PDB Molecule:nlp/p60 family protein; PDBTitle: crystal structure of a nlpc/p60 family protein (bce_2878) from2 bacillus cereus atcc 10987 at 1.79 a resolution
70 | c3h0gE_ |
| not modelled | 6.6 | 25 | PDB header:transcription Chain: E: PDB Molecule:dna-directed rna polymerases i, ii, and iii PDBTitle: rna polymerase ii from schizosaccharomyces pombe
71 | c2fwkB_ |
| not modelled | 6.4 | 14 | PDB header:dna binding protein Chain: B: PDB Molecule:u6 snrna-associated sm-like protein lsm5; PDBTitle: crystal structure of cryptosporidium parvum u6 snrna-associated sm-2 like protein lsm5
72 | d2pw9a1 |
| not modelled | 6.4 | 25 | Fold:Cytidine deaminase-like Superfamily:Cytidine deaminase-like Family:FdhD/NarQ
73 | c2fvnA_ |
| not modelled | 6.3 | 19 | PDB header:cell adhesion Chain: A: PDB Molecule:protein afad; PDBTitle: the fibrillar tip complex of the afa/dr adhesins from2 pathogen e. coli displays synergistic binding to 5 1 and v3 3 integrins
74 | d1n9sc_ |
| not modelled | 6.3 | 13 | Fold:Sm-like fold Superfamily:Sm-like ribonucleoproteins Family:Sm motif of small nuclear ribonucleoproteins, SNRNP
75 | c2dlpA_ |
| not modelled | 6.2 | 27 | PDB header:structural protein Chain: A: PDB Molecule:kiaa1783 protein; PDBTitle: solution structure of the sh3 domain of human kiaa17832 protein
76 | c3cw1Z_ |
| not modelled | 6.2 | 22 | PDB header:splicing Chain: Z: PDB Molecule:small nuclear ribonucleoprotein f; PDBTitle: crystal structure of human spliceosomal u1 snrnp
77 | d1mgqa_ |
| not modelled | 6.2 | 16 | Fold:Sm-like fold Superfamily:Sm-like ribonucleoproteins Family:Sm motif of small nuclear ribonucleoproteins, SNRNP
78 | c2yueA_ |
| not modelled | 6.0 | 7 | PDB header:rna binding protein Chain: A: PDB Molecule:protein neuralized; PDBTitle: solution structure of the neuz (nhr) domain in neuralized2 from drosophila melanogaster
79 | c3swnT_ |
| not modelled | 6.0 | 11 | PDB header:rna binding protein Chain: T: PDB Molecule:u6 snrna-associated sm-like protein lsm6; PDBTitle: structure of the lsm657 complex: an assembly intermediate of the lsm12 7 and lsm2 8 rings
80 | d1jbma_ |
| not modelled | 5.9 | 16 | Fold:Sm-like fold Superfamily:Sm-like ribonucleoproteins Family:Sm motif of small nuclear ribonucleoproteins, SNRNP
81 | d1o91a_ |
| not modelled | 5.7 | 17 | Fold:TNF-like Superfamily:TNF-like Family:TNF-like
82 | c1o91B_ |
| not modelled | 5.7 | 17 | PDB header:collagen Chain: B: PDB Molecule:collagen alpha 1(viii) chain; PDBTitle: crystal structure of a collagen viii nc1 domain trimer
83 | d1ljoa_ |
| not modelled | 5.6 | 13 | Fold:Sm-like fold Superfamily:Sm-like ribonucleoproteins Family:Sm motif of small nuclear ribonucleoproteins, SNRNP
84 | d1d3bb_ |
| not modelled | 5.6 | 8 | Fold:Sm-like fold Superfamily:Sm-like ribonucleoproteins Family:Sm motif of small nuclear ribonucleoproteins, SNRNP
85 | c3d6xA_ |
| not modelled | 5.5 | 27 | PDB header:lyase Chain: A: PDB Molecule:(3r)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase; PDBTitle: crystal structure of campylobacter jejuni fabz
86 | d1p9ka_ |
| not modelled | 5.5 | 24 | Fold:Alpha-L RNA-binding motif Superfamily:Alpha-L RNA-binding motif Family:YbcJ-like
87 | c3dzoA_ |
| not modelled | 5.3 | 16 | PDB header:transferase Chain: A: PDB Molecule:rhoptry kinase domain; PDBTitle: crystal structure of a rhoptry kinase from toxoplasma gondii
88 | d1yq2a3 |
| not modelled | 5.3 | 21 | Fold:Galactose-binding domain-like Superfamily:Galactose-binding domain-like Family:beta-Galactosidase/glucuronidase, N-terminal domain
89 | c3cnrA_ |
| not modelled | 5.2 | 23 | PDB header:unknown function Chain: A: PDB Molecule:type iv fimbriae assembly protein; PDBTitle: crystal structure of pilz (xac1133) from xanthomonas2 axonopodis pv citri
90 | c1zyiA_ |
| not modelled | 5.2 | 11 | PDB header:translation Chain: A: PDB Molecule:methylosome subunit picln; PDBTitle: solution structure of icln, a multifunctional protein2 involved in regulatory mechanisms as different as cell3 volume regulation and rna splicing
91 | d2cnda1 |
| not modelled | 5.2 | 33 | Fold:Reductase/isomerase/elongation factor common domain Superfamily:Riboflavin synthase domain-like Family:Ferredoxin reductase FAD-binding domain-like
92 | d2bmwa1 |
| not modelled | 5.0 | 33 | Fold:Reductase/isomerase/elongation factor common domain Superfamily:Riboflavin synthase domain-like Family:Ferredoxin reductase FAD-binding domain-like