15/01/2012 17:59:29 : INFO  : Run start: Sun Jan 15 17:59:28 GMT 2012
15/01/2012 17:59:33 : INFO  : Initialised job
15/01/2012 17:59:34 : INFO  : Renaming log file 'phyre2_20120115_175928.log' to '/bmm/www/servers/phyre2/public_html/phyre2_output/f48f842527985c7d/phyre_20120115_175928.log'
15/01/2012 17:59:35 : INFO  : Initialised job:
Sequence
>batch____
MSDMNNPADDNNGAMDDLWAEALSEQKSTSSKSAAETVFQQFGGGDVSGTLQDIDLIMDI
PVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQGEVVVVADKYGV
RITDIITPSERMRRLSR

15/01/2012 17:59:35 : INFO  : Checked sequence
15/01/2012 17:59:37 : INFO  : Finding homologues with PSI-BLAST
15/01/2012 17:59:38 : INFO  : PSI-BLAST 3 iterations
15/01/2012 18:00:37 : INFO  : PSI-BLAST 5 iterations
15/01/2012 18:01:41 : INFO  : Finished PSI-BLAST
15/01/2012 18:01:41 : INFO  : Running Buildali to generate a3m file
15/01/2012 18:04:20 : INFO  : Converting to HMM
15/01/2012 18:04:20 : INFO  : Calibrating HMM
15/01/2012 18:04:25 : INFO  : Searching HMM database
15/01/2012 18:07:29 : INFO  : Finished buildali
15/01/2012 18:07:30 : INFO  : Predicting secondary structure
15/01/2012 18:07:34 : INFO  : Predicted secondary structure (PSI-Pred)
15/01/2012 18:07:34 : INFO  : Predicting Disordered regions
15/01/2012 18:07:36 : INFO  : Predicted Disorder (Disopred)
15/01/2012 18:07:36 : INFO  : Running memsat_svm check
15/01/2012 18:11:29 : INFO  : Globular protein
15/01/2012 18:11:30 : INFO  : Predicted Transmembrane (memsat_svm) ID 'f48f842527985c7d'
15/01/2012 18:11:32 : INFO  : Initialising fold library search
15/01/2012 18:11:33 : INFO  : Initialised search input
15/01/2012 18:11:34 : INFO  : Building Ensemble models
15/01/2012 18:11:36 : INFO  : Building hh.d1o6aa_.model.1.pdb
15/01/2012 18:11:43 : INFO  : Building d1o6aa_.1.pdb
15/01/2012 18:11:50 : INFO  : Building d1o9ya_.2.pdb
15/01/2012 18:11:56 : INFO  : Building c2k5fA_.3.pdb
15/01/2012 18:12:04 : INFO  : Building d2gcxa1.4.pdb
15/01/2012 18:12:12 : INFO  : Building c2k5lA_.5.pdb
15/01/2012 18:12:19 : INFO  : Building c2k4yA_.6.pdb
15/01/2012 18:12:26 : INFO  : Building c3mhxB_.7.pdb
15/01/2012 18:12:31 : INFO  : Building c2k5iA_.8.pdb
15/01/2012 18:12:37 : INFO  : Building c3gt2A_.9.pdb
15/01/2012 18:12:45 : INFO  : Building d3bwud1.10.pdb
15/01/2012 18:12:53 : INFO  : Building d1m5q1_.11.pdb
15/01/2012 18:13:00 : INFO  : Building d1wmxb_.12.pdb
15/01/2012 18:13:07 : INFO  : Building d1zdva1.13.pdb
15/01/2012 18:13:14 : INFO  : Building c3ddyA_.14.pdb
15/01/2012 18:13:22 : INFO  : Building d2h3ja1.15.pdb
15/01/2012 18:13:29 : INFO  : Building c2glvA_.16.pdb
15/01/2012 18:13:35 : INFO  : Building c2e63A_.17.pdb
15/01/2012 18:13:42 : INFO  : Building c2fg0B_.18.pdb
15/01/2012 18:13:48 : INFO  : Building d2evra2.19.pdb
15/01/2012 18:13:55 : INFO  : Building c3e19D_.20.pdb
15/01/2012 18:14:06 : INFO  : Finished HH model building
15/01/2012 18:14:07 : WARN  : Set python to /bmm/www/servers/phyre2/bin//newpython/python2.6
15/01/2012 18:14:50 : INFO  : html domain output complete ID 'f48f842527985c7d'
15/01/2012 18:19:41 : INFO  : Run end  : Sun Jan 15 18:19:40 GMT 2012
