 |
| Job Description | P37682 | | Confidence | 78.62% | Date | Thu Jan 5 11:56:58 GMT 2012 |
| Rank | 227 | Aligned Residues | 92 |
| % Identity | 8% | Template | d1atga_ |
| SCOP info | Periplasmic binding protein-like II
| Periplasmic binding protein-like II
| Phosphate binding protein-like
|
| Resolution | 1.20 |
|
 |
|   |   |
227 | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | |
. | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | |
. | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . | . | 300 | . | . | . | . |
| Predicted Secondary structure |   |
|  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |
|
| . |
|  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  | . |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
| Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence |   |
K | G | N | Y | V | C | D | N | T | Q | S | A | L | E | L | A | R | N | H | . |
L | G | I | V | F | A | P | D | K | S | V | Q | S | D | L | Q | D | G | T | L | V | P | C | . |
F | Q | Q | P | Y | E | W | W | L | D | L | V | A | I | F | R | K | R | E | Y | Q | P | W | R | V | Q | Y | V | L | D | E | M | L | R | E | I |
| Query Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
| . |   |
|
|   |   |
|
|   |   |   |   |   |   |   |   |   |   |
|   |
|
|   |   | . |   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|   |   |   |   |
| Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Template Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|   |   |   |   |   |
|   |   |
|
|   |
|
|   |
|   |
|
| Template Sequence |   |
E | R | I | V | E | A | N | S | V | G | Q | A | H | S | Q | T | A | S | G | A | A | D | L | G | F | V | A | L | A | Q | I | I | Q | A | A | A | K | I | P | G | S | H | W | F | P | P | A | N | Y | Y | E | P | I | V | Q | Q | A | V | I | T | K | S | T | A | E | K | A | N | A | E | Q | F | M | S | W | M | K | G | P | K |
| Template Known Secondary structure |   |
T |
|  |  |  |  | S | S |  |  |  |  |  |  |  |  |  | T | T | S | S | S |  |  |  |  |  | G | G | G | T |
|
| T | T | S |
|
| S | S |  |  |  |
|
|
| G | G | G | S |
|
|
|  |  |  |  |  |  | B | T | T |
| S |
|  |  |  |  |  |  |  |  |  |  | T | T | S |  |  |
| Template Predicted Secondary structure |   |
|
|  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|  |  |
| Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |
139 | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . |
|   |
|   |   |
305 | . | . | . | . | 310 | . | . | . | . | . | . | . | . |
| Predicted Secondary structure |   |
 |  |  |  |
|
|
|
|
|
|
|
|
|
|
| Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence |   |
R | H | Q | L | A | Q | S | Q | Q | L | R | P | E | Q |
| Query Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |
|   |   |
| Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Template Conservation |   |
  |
|   |   |   |   |   |   |
|
|   |
|
|   |
| Template Sequence |   |
A | V | A | I | I | K | A | A | G | Y | V | L | P | Q |
| Template Known Secondary structure |   |
 |  |  |  |  |  |  | T | T |
| B |
|
|
|
| Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |
|
|
|
|
|
|
|
| Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |
219 | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . |
|   |
No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
|   |
|
|
|