223 d2java1 Probab=99.46   E-value=6e-12  Score=83.49  Aligned_columns=151  Identities=17%

Q ss_pred             CCCCCCCCEECCCCEEEEEEE---CCEEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEEECCCCCEEE
Q ss_conf             454554300127718998543---99699998760026556776667788764201343320023101233037861356
Q batch____         3 RLSEQSPLGTGRHRKCYAHPE---DAQRCIKIVYHRGDGGDKEIRRELKYYAHLGRRLKDWSGIPRYHGTVETDCGTGYV   79 (210)
Q Consensus         3 ~l~~~~~IG~G~~~~VY~~~~---~~~~aIKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~   79 (210)
                      +++-.+.||+|+||.||++.+   +..+|||+++.... .+........+...+  ....|++|+++++.....  .+++
T Consensus         5 ~y~~~~~iG~G~fg~Vy~~~~~~t~~~vAiK~i~~~~~-~~~~~~~~~~E~~~l--~~l~hpnIv~~~~~~~~~--~~~v   79 (245)
T d2java1           5 DYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSM-TEAEKQMLVSEVNLL--RELKHPNIVRYYDRIIDT--LYIV   79 (245)
T ss_dssp             GEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCTTS-CHHHHHHHHHHHHHT--TSCCCTTBCCEEEEEECC--EEEE
T ss_pred             CEEEEEEEEECCCEEEEEEEECCCCCEEEEEEEEHHHC-CHHHHHHHHHHHHHH--HHHCCCCEEEEEEEECCC--CHHH
T ss_conf             53898898752985999999989981999999825889-999999999999999--760789830021130355--1013


Q ss_pred             EEECCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHEEEEECCCCCCEEEEECCCCCCCC
Q ss_conf             75146741466874898841589968999999999999999998791755678120899524788867999816686410
Q batch____        80 YDVIADFDGKPSITLTEFAEQCRYEEDIAQLRQLLKQLKRYLQDNRIVTMSLKPQNILCHRISESEVIPVVCDNIGESTL  159 (210)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qL~~~l~~Lh~~~IiHrDLKp~NILi~~~~~~~~~~~LiDg~G~~~~  159 (210)
                      |+++..+++..............+......+..++..++.++|.    |+++++.|++.    ......++.| +|....
T Consensus        80 ~Ey~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~----~~~~~~~~~~~----~~~~~~~~~~-~~~~~~  150 (245)
T d2java1          80 MEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHR----RSDLKPANVFL----DGKQNVKLGD-FGLARI  150 (245)
T ss_dssp             EECCTTEEHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHH----HCCCCGGGEEE----CTTSCEEECC-HHHHHH
T ss_pred             HHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCC----CCCCCCCCCCC----CCCCCCCCCC-CCCCCC
T ss_conf             32023124332111223456678999988876777777764000----01233222222----2333211222-222222


Q ss_pred             CCCCCCCH
Q ss_conf             11000331
Q batch____       160 IPLATWSK  167 (210)
Q Consensus       160 ip~~~~~~  167 (210)
                      ..-+.+.+
T Consensus       151 ~~~~~~~~  158 (245)
T d2java1         151 LGTPYYMS  158 (245)
T ss_dssp             CCCCSCCC
T ss_pred             CCCCCCCC
T ss_conf             22222222