54 c3polA_ Probab=80.35   E-value=3.6  Score=19.30  Aligned_columns=115  Identities=10%

Q ss_pred             CCCCCEEEEEEECCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCHHHHHHHHHHHCCEEEEEECCCCCCHHHHHHHH
Q ss_conf             97887389999608956899999999981789980899988854902489999987438939999678876057899887
Q batch____         2 MNSTNKLSVIIPLYNAGDDFRTCMESLITQTWTALEIIIINDGSTDNSVEIAKYYAENYPHVRLLHQANAGASVARNRGI   81 (344)
Q Consensus         2 m~~~p~iSIIIp~yN~~~~l~~~L~Si~~q~~~~~EIiivDd~StD~t~~i~~~~~~~~~~i~~i~~~~~g~~~~~n~g~   81 (344)
                      |-.||.+.|     +....|+.+|+.+......+.=+++.++      .++.........++....+...+.......++
T Consensus        24 l~~K~Ll~v-----~Gkpli~~~i~~l~~~~~~~~iiVv~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   92 (262)
T c3polA_          24 LPGKPLLLI-----HDRPMILRVVDQAKKVEGFDDLCVATDD------ERIAEICRAEGVDVVLTSADHPSGTDRLSEVA   92 (262)
T ss_dssp             STTGGGSEE-----TTEEHHHHHHHHHTTCCSCSEEEEEESC------HHHHHHHHTTTCEEEECCSCCCCHHHHHHHHH
T ss_pred             CCCCEEEEE-----CCEEHHHHHHHHHHHCCCCCEEEEECCH------HHHHHHHHHCCCCEEEECCCCCCCHHHHHHHH
T ss_conf             987114436-----8565799999999848998289997695------88899997539949996488765126899999


Q ss_pred             HHC---CCCEEEEECCCC-CCCHHHHHHHHHHHHHCCCCEEEEEEEEEEC
Q ss_conf             303---684499965997-1575699999999984599799972368754
Q batch____        82 EVA---TGKYVAFVDADD-EVYPTMYETLMTMALEDDLDVAQCNADWCFR  127 (344)
Q Consensus        82 ~~a---~gd~i~~lD~Dd-~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~  127 (344)
                      ..+   ..++++++++|+ ...++.+..+++.+.+.+...+.........
T Consensus        93 ~~~~~~~~d~~~~~~~d~p~i~~~~i~~~~~~~~~~~~~~~~~~~~~~~~  142 (262)
T c3polA_          93 RIKGWDADDIIVNVQGDEPLLPAQLVQQVAKLLVDKPNCSMSTLCEPIHA  142 (262)
T ss_dssp             HHHTCCTTCEEEECCTTCTTCCHHHHHHHHHHHHHCTTCSEEEEEEECCC
T ss_pred             HHHCCCCCCEEEEEECCCEEECHHHHHHHHHHHHHCCCCEEEEEEEECCC
T ss_conf             85004689889998289533359999999999997699357564454048