BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= batch____ (477 letters) Database: uniref50.fasta 3,077,464 sequences; 1,040,396,356 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value UniRef50_P77779 Putative uncharacterized protein ybfO n=67 Tax=E... 984 0.0 UniRef50_Q328Z1 RhsA protein in rhs element n=7 Tax=Enterobacter... 652 0.0 UniRef50_Q31U53 Putative uncharacterized protein n=1 Tax=Shigell... 646 0.0 UniRef50_P16919 Protein rhsD n=261 Tax=Bacteria RepID=RHSD_ECOLI 551 e-155 UniRef50_UPI0001B52C8C protein, rhs-like protein n=4 Tax=Enterob... 506 e-142 UniRef50_UPI0001C341D4 protein RhsA n=1 Tax=Citrobacter youngae ... 462 e-129 UniRef50_C1M8X5 Core protein n=2 Tax=Citrobacter RepID=C1M8X5_9ENTR 459 e-127 UniRef50_B5PJT7 Protein RhsD n=2 Tax=Enterobacteriaceae RepID=B5... 378 e-103 UniRef50_O52663 Core protein (Fragment) n=5 Tax=Enterobacteriace... 319 2e-85 UniRef50_A8A655 Rhs family protein n=14 Tax=Enterobacteriaceae R... 302 2e-80 UniRef50_P32109 Putative uncharacterized protein yibJ n=14 Tax=B... 299 2e-79 UniRef50_UPI0001B52595 rhsE element core protein RshE n=1 Tax=Es... 212 2e-53 UniRef50_B3X3P2 RhsH n=1 Tax=Shigella dysenteriae 1012 RepID=B3X... 188 4e-46 UniRef50_UPI00019F17FA RhsC core protein with extension n=1 Tax=... 184 6e-45 UniRef50_A9C0N8 YD repeat protein n=5 Tax=cellular organisms Rep... 174 5e-42 UniRef50_D1T3Q3 YD repeat protein (Fragment) n=2 Tax=Acidovorax ... 165 4e-39 UniRef50_A1TV35 YD repeat protein n=2 Tax=Acidovorax RepID=A1TV3... 161 4e-38 UniRef50_UPI00019F181C rhsC element core protein RshC n=2 Tax=En... 159 2e-37 UniRef50_Q3YV37 Putative uncharacterized protein n=1 Tax=Shigell... 158 3e-37 UniRef50_P77759 Putative uncharacterized protein ylbH n=12 Tax=E... 150 7e-35 UniRef50_D1T3N5 YD repeat protein n=1 Tax=Acidovorax avenae subs... 149 2e-34 UniRef50_C5CZG8 RHS protein n=1 Tax=Variovorax paradoxus S110 Re... 131 7e-29 UniRef50_A9AE26 Rhs family protein n=10 Tax=cellular organisms R... 127 1e-27 UniRef50_Q0JZD5 RHS family protein n=9 Tax=Bacteria RepID=Q0JZD5... 124 6e-27 UniRef50_Q1LDW7 YD repeat n=2 Tax=Burkholderiaceae RepID=Q1LDW7_... 124 7e-27 UniRef50_Q147B5 Rhs family protein n=2 Tax=Betaproteobacteria Re... 122 3e-26 UniRef50_A1TQS0 YD repeat protein n=2 Tax=Acidovorax RepID=A1TQS... 119 3e-25 UniRef50_C6EE82 Rhs family protein-like protein n=2 Tax=Escheric... 119 3e-25 UniRef50_C5CXA7 YD repeat protein n=1 Tax=Variovorax paradoxus S... 119 3e-25 UniRef50_B2HXH5 Rhs family protein n=5 Tax=Acinetobacter baumann... 113 2e-23 UniRef50_Q2SPP2 Rhs family protein n=3 Tax=Hahella chejuensis KC... 112 3e-23 UniRef50_Q2SKM2 Rhs family protein n=3 Tax=Hahella chejuensis KC... 110 1e-22 UniRef50_Q2SFR1 Rhs family protein n=9 Tax=cellular organisms Re... 110 1e-22 UniRef50_B7GX39 Protein rhsD n=4 Tax=Acinetobacter baumannii Rep... 109 2e-22 UniRef50_Q7NY44 Probable Rhs-family protein n=2 Tax=Chromobacter... 109 2e-22 UniRef50_Q2SFR5 Rhs family protein n=1 Tax=Hahella chejuensis KC... 109 2e-22 UniRef50_B2K1J9 YD repeat protein n=23 Tax=Yersinia RepID=B2K1J9... 108 4e-22 UniRef50_A1TJG7 YD repeat protein n=4 Tax=Proteobacteria RepID=A... 108 5e-22 UniRef50_D0KEV6 RHS protein n=2 Tax=Enterobacteriaceae RepID=D0K... 107 9e-22 UniRef50_D1T3N4 YD repeat protein n=2 Tax=Betaproteobacteria Rep... 107 1e-21 UniRef50_B0VRR7 Putative uncharacterized protein n=1 Tax=Acineto... 107 1e-21 UniRef50_Q39K64 Rhs family protein n=22 Tax=Burkholderia RepID=Q... 107 1e-21 UniRef50_Q4ZLF3 YD repeat n=5 Tax=Pseudomonas syringae group Rep... 106 2e-21 UniRef50_A1U3R9 YD repeat protein n=3 Tax=Gammaproteobacteria Re... 103 1e-20 UniRef50_A1TR18 YD repeat protein n=8 Tax=Acidovorax RepID=A1TR1... 103 1e-20 UniRef50_B1J8X0 YD repeat protein n=50 Tax=Gammaproteobacteria R... 102 3e-20 UniRef50_B2VH58 Rhs family protein n=5 Tax=Enterobacteriaceae Re... 102 3e-20 UniRef50_A6V8C8 Putative uncharacterized protein n=7 Tax=Pseudom... 102 4e-20 UniRef50_Q13ML3 YD repeat protein n=10 Tax=Proteobacteria RepID=... 101 5e-20 UniRef50_B9B9U8 YD repeat protein n=1 Tax=Burkholderia multivora... 101 6e-20 UniRef50_Q7MDR0 Rhs family protein n=3 Tax=Vibrio vulnificus Rep... 100 2e-19 UniRef50_Q48LL6 Rhs family protein n=1 Tax=Pseudomonas syringae ... 100 2e-19 UniRef50_C0Q6Q9 Rhs-family protein n=27 Tax=Enterobacteriaceae R... 100 2e-19 UniRef50_C5AIF2 Rhs family protein n=1 Tax=Burkholderia glumae B... 99 4e-19 UniRef50_UPI0001BC4026 Rhs family protein n=6 Tax=Neisseria RepI... 98 6e-19 UniRef50_Q6LUC6 Hypothetical nucleotidyltransferase n=1 Tax=Phot... 98 6e-19 UniRef50_Q6LUC4 Putative uncharacterized protein n=1 Tax=Photoba... 98 7e-19 UniRef50_Q4K3M9 Rhs family protein n=5 Tax=Pseudomonas RepID=Q4K... 98 7e-19 UniRef50_A7FDJ9 RHS/YD repeat protein n=30 Tax=Enterobacteriacea... 98 9e-19 UniRef50_Q12LF3 YD repeat n=2 Tax=Shewanella denitrificans OS217... 98 9e-19 UniRef50_A6GLW0 Rhs family protein n=1 Tax=Limnobacter sp. MED10... 97 1e-18 UniRef50_D0KES6 YD repeat protein n=15 Tax=Gammaproteobacteria R... 97 1e-18 UniRef50_UPI0001C34A7C Rhs family protein n=1 Tax=Neisseria subf... 97 1e-18 UniRef50_Q1I7Q5 Putative uncharacterized protein n=11 Tax=Pseudo... 97 2e-18 UniRef50_A7K3Q8 Rhs family protein n=7 Tax=Vibrio RepID=A7K3Q8_V... 97 2e-18 UniRef50_D0KES8 RHS protein n=3 Tax=Pectobacterium wasabiae WPP1... 96 2e-18 UniRef50_Q87U70 Rhs family protein n=2 Tax=Pseudomonas RepID=Q87... 96 4e-18 UniRef50_B1JCT8 RHS protein n=1 Tax=Pseudomonas putida W619 RepI... 96 4e-18 UniRef50_A1TTQ1 Rhs family protein n=1 Tax=Acidovorax citrulli A... 96 4e-18 UniRef50_C3JXH8 Putative Rhs protein n=1 Tax=Pseudomonas fluores... 96 4e-18 UniRef50_C5ALM7 YD repeat protein n=19 Tax=Proteobacteria RepID=... 95 6e-18 UniRef50_B4SV70 Rhs-family protein n=42 Tax=Enterobacteriaceae R... 95 7e-18 UniRef50_C8QGI4 YD repeat protein n=1 Tax=Pantoea sp. At-9b RepI... 94 1e-17 UniRef50_A1TSU8 YD repeat protein n=4 Tax=Acidovorax RepID=A1TSU... 94 1e-17 UniRef50_C9Y459 Putative uncharacterized protein n=1 Tax=Cronoba... 94 1e-17 UniRef50_A8ZSG6 YD repeat protein n=1 Tax=Desulfococcus oleovora... 93 2e-17 UniRef50_C6M9F5 RHS family protein n=2 Tax=Bacteria RepID=C6M9F5... 93 3e-17 UniRef50_C6M9F4 Rhs family protein n=8 Tax=Neisseria RepID=C6M9F... 92 3e-17 UniRef50_C9Y462 Putative uncharacterized protein n=1 Tax=Cronoba... 92 4e-17 UniRef50_Q2SFS1 Rhs family protein n=1 Tax=Hahella chejuensis KC... 92 5e-17 UniRef50_Q83LZ1 Putative Rhs-family protein n=1 Tax=Shigella fle... 92 5e-17 UniRef50_C8Q7Z5 YD repeat protein n=8 Tax=Enterobacteriaceae Rep... 92 6e-17 UniRef50_Q2SGE8 Rhs family protein n=1 Tax=Hahella chejuensis KC... 91 1e-16 UniRef50_B7LTT0 Putative uncharacterized protein n=4 Tax=Enterob... 91 1e-16 UniRef50_C1M4X0 Predicted protein n=1 Tax=Citrobacter sp. 30_2 R... 90 2e-16 UniRef50_A7FDK7 YD/RHS repeat protein n=25 Tax=Enterobacteriacea... 90 2e-16 UniRef50_A1TTP6 YD repeat protein n=2 Tax=Acidovorax citrulli AA... 90 2e-16 UniRef50_B5MRU6 Rhs-family protein n=9 Tax=Gammaproteobacteria R... 90 2e-16 UniRef50_C6AKX3 Rhs family protein n=4 Tax=Aggregatibacter aphro... 90 2e-16 UniRef50_C5AA19 Rhs family protein n=1 Tax=Burkholderia glumae B... 90 2e-16 UniRef50_A3NNM1 Protein RhsD n=20 Tax=pseudomallei group RepID=A... 90 2e-16 UniRef50_A0LJM9 YD repeat protein n=3 Tax=Syntrophobacter fumaro... 90 2e-16 UniRef50_Q1K295 YD repeat n=4 Tax=Desulfuromonas acetoxidans DSM... 90 2e-16 UniRef50_B8FBZ2 YD repeat protein n=1 Tax=Desulfatibacillum alke... 89 2e-16 UniRef50_A4FJ21 YD repeat protein n=1 Tax=Saccharopolyspora eryt... 89 3e-16 UniRef50_D0HCV2 Rhs protein n=3 Tax=Vibrio mimicus VM223 RepID=D... 89 3e-16 UniRef50_D1SWH5 RHS protein (Fragment) n=1 Tax=Acidovorax avenae... 89 3e-16 UniRef50_A9EW02 Conserved exported carbohydrate-binding protein,... 89 4e-16 UniRef50_B4ETQ2 Rhs-family protein n=9 Tax=Enterobacteriaceae Re... 89 4e-16 UniRef50_C6M5B1 Rhs-related protein n=7 Tax=Proteobacteria RepID... 89 4e-16 UniRef50_Q88FK6 RHS family protein, putative n=1 Tax=Pseudomonas... 89 5e-16 UniRef50_D0KWY8 YD repeat protein n=1 Tax=Halothiobacillus neapo... 89 5e-16 UniRef50_B1KGR6 YD repeat protein n=1 Tax=Shewanella woodyi ATCC... 88 8e-16 UniRef50_UPI00016A9A82 Rhs family protein n=2 Tax=Burkholderia o... 87 1e-15 UniRef50_C9Y441 Putative uncharacterized protein n=1 Tax=Cronoba... 87 1e-15 UniRef50_Q6D1M4 Rhs protein n=5 Tax=Enterobacteriaceae RepID=Q6D... 87 1e-15 UniRef50_A7FN18 RHS/YD repeat protein n=5 Tax=cellular organisms... 87 1e-15 UniRef50_B2PVY9 Putative uncharacterized protein n=12 Tax=Entero... 87 1e-15 UniRef50_UPI00019F181A conserved protein, rhs-like protein n=1 T... 87 2e-15 UniRef50_B5H9Z7 Rhs protein n=2 Tax=Streptomyces RepID=B5H9Z7_STRPR 87 2e-15 UniRef50_D2TGW0 Putative Rhs protein n=2 Tax=Citrobacter RepID=D... 86 3e-15 UniRef50_B3PEN8 Rhsfamily protein n=2 Tax=Cellvibrio japonicus U... 86 3e-15 UniRef50_B7H4M5 Uncharacterized protein ybfO n=3 Tax=Acinetobact... 86 3e-15 UniRef50_Q2SPP3 Rhs family protein n=1 Tax=Hahella chejuensis KC... 86 3e-15 UniRef50_B4ETQ7 Putative Rhs-family protein n=3 Tax=Enterobacter... 86 4e-15 UniRef50_UPI000196E06E Rhs family protein n=2 Tax=Neisseria muco... 86 4e-15 UniRef50_Q395C2 Rhs family protein n=1 Tax=Burkholderia sp. 383 ... 85 5e-15 UniRef50_C7MXD3 Rhs family protein n=1 Tax=Saccharomonospora vir... 85 5e-15 UniRef50_C7Q0A7 YD repeat protein n=2 Tax=Catenulispora acidiphi... 85 6e-15 UniRef50_A1TSG3 RHS protein n=1 Tax=Acidovorax citrulli AAC00-1 ... 85 7e-15 UniRef50_B2HAQ4 RhsD protein n=4 Tax=Burkholderia RepID=B2HAQ4_B... 85 7e-15 UniRef50_Q399U9 Rhs family protein n=3 Tax=Proteobacteria RepID=... 84 8e-15 UniRef50_A9FBU5 Conserved carbohydrate-binding protein, Rhs fami... 84 9e-15 UniRef50_D1YPP7 RHS repeat-associated core domain protein n=1 Ta... 84 1e-14 UniRef50_C0EPY1 Putative uncharacterized protein n=7 Tax=Neisser... 83 2e-14 UniRef50_A9C2K3 YD repeat protein n=1 Tax=Delftia acidovorans SP... 83 2e-14 UniRef50_Q2T5B9 YD repeat protein n=39 Tax=Proteobacteria RepID=... 83 2e-14 UniRef50_C6CNW6 YD repeat protein n=8 Tax=Enterobacteriaceae Rep... 82 4e-14 UniRef50_D0KZB0 YD repeat protein n=1 Tax=Halothiobacillus neapo... 82 4e-14 UniRef50_D0BWK2 YD repeat protein n=1 Tax=Acinetobacter sp. RUH2... 82 5e-14 UniRef50_Q7N2G0 Complete genome; segment 11/17 n=4 Tax=Gammaprot... 81 7e-14 UniRef50_B2PW78 Putative uncharacterized protein n=1 Tax=Provide... 81 8e-14 UniRef50_A9AKU8 Type VI secretion system Vgr family protein n=10... 81 8e-14 UniRef50_Q2SIG5 Rhs family protein n=1 Tax=Hahella chejuensis KC... 81 1e-13 UniRef50_D1JME6 Rhs family protein n=22 Tax=Bacteroides RepID=D1... 80 1e-13 UniRef50_A4SKJ3 Rhs family protein n=2 Tax=Bacteria RepID=A4SKJ3... 80 1e-13 UniRef50_C0EPY5 Putative uncharacterized protein n=1 Tax=Neisser... 80 1e-13 UniRef50_C4NV50 Rhs repeat family protein n=10 Tax=Gammaproteoba... 80 1e-13 UniRef50_A1WE65 Rhs family protein-like protein n=1 Tax=Verminep... 80 2e-13 UniRef50_C7QG23 YD repeat protein n=2 Tax=Catenulispora acidiphi... 79 3e-13 UniRef50_D1S833 YD repeat protein n=1 Tax=Micromonospora auranti... 79 3e-13 UniRef50_UPI0001AF2680 RHS/YD repeat-containing protein n=1 Tax=... 79 3e-13 UniRef50_UPI000190F33A Rhs-family protein n=2 Tax=Salmonella ent... 79 3e-13 UniRef50_UPI0001B53B37 YD repeat protein n=1 Tax=Streptomyces sp... 79 3e-13 UniRef50_Q3JSF4 RhsD protein n=23 Tax=Burkholderia pseudomallei ... 79 4e-13 UniRef50_C6WJA6 YD repeat protein n=3 Tax=Actinosynnema mirum DS... 79 4e-13 UniRef50_Q6FD94 Putative RHS-related protein n=1 Tax=Acinetobact... 79 4e-13 UniRef50_D1AA66 YD repeat-containing protein n=1 Tax=Thermomonos... 79 5e-13 UniRef50_B2STD6 RHS Repeat family n=18 Tax=Bacteria RepID=B2STD6... 78 6e-13 UniRef50_B5I7B2 Rhs repeat protein n=1 Tax=Streptomyces sviceus ... 78 7e-13 UniRef50_D1PUV1 RHS family protein n=1 Tax=Prevotella bergensis ... 78 7e-13 UniRef50_D0KG38 Rhs family protein-like protein n=1 Tax=Pectobac... 77 1e-12 UniRef50_A3KUM5 Rhs family protein n=10 Tax=Pseudomonas aerugino... 77 1e-12 UniRef50_UPI0001B58169 YD repeat-containing protein n=1 Tax=Stre... 77 1e-12 UniRef50_A4B8X0 YD repeat n=1 Tax=Reinekea blandensis MED297 Rep... 77 2e-12 UniRef50_A9C2K7 Rhs family protein-like protein n=1 Tax=Delftia ... 77 2e-12 UniRef50_A5GE16 YD repeat protein n=1 Tax=Geobacter uraniireduce... 77 2e-12 UniRef50_C7PJF4 YD repeat protein n=2 Tax=Chitinophaga pinensis ... 76 2e-12 UniRef50_Q30CR7 LipX3 n=4 Tax=Streptomyces RepID=Q30CR7_STRAU 76 2e-12 UniRef50_B4V251 LipX3 n=2 Tax=Streptomyces RepID=B4V251_9ACTO 76 2e-12 UniRef50_D1VCV7 YD repeat protein n=1 Tax=Frankia sp. EuI1c RepI... 76 3e-12 UniRef50_C4KA75 YD repeat protein n=1 Tax=Thauera sp. MZ1T RepID... 76 3e-12 UniRef50_B6VUY0 Putative uncharacterized protein n=2 Tax=Bactero... 76 3e-12 UniRef50_B4EGW8 RHS-family protein n=9 Tax=Burkholderiaceae RepI... 76 3e-12 UniRef50_C7QAC6 YD repeat protein n=2 Tax=Bacteria RepID=C7QAC6_... 76 3e-12 UniRef50_UPI0001B56FBA YD repeat-containing protein n=1 Tax=Stre... 76 3e-12 UniRef50_C6CI62 YD repeat protein n=7 Tax=Enterobacteriaceae Rep... 75 4e-12 UniRef50_UPI00016B0868 Rhs family protein n=1 Tax=Burkholderia p... 75 4e-12 UniRef50_A9EVR3 Conserved carbohydrate-binding protein, Rhs fami... 75 4e-12 UniRef50_C9NF93 YD repeat protein n=1 Tax=Streptomyces flavogris... 75 5e-12 UniRef50_C5T0D9 YD repeat protein n=1 Tax=Acidovorax delafieldii... 75 5e-12 UniRef50_C7Q0B8 YD repeat protein n=1 Tax=Catenulispora acidiphi... 75 5e-12 UniRef50_B2PYS3 Putative uncharacterized protein n=1 Tax=Provide... 75 7e-12 UniRef50_D1W448 RHS repeat-associated core domain protein n=1 Ta... 75 7e-12 UniRef50_Q8GDM7 Rhs n=3 Tax=Photorhabdus RepID=Q8GDM7_PHOLU 75 7e-12 UniRef50_A9GD22 Conserved carbohydrate-binding protein, Rhs fami... 75 7e-12 UniRef50_Q7NYN4 Probable rhs-related transmembrane protein relat... 75 8e-12 UniRef50_C6WQE4 YD repeat protein n=1 Tax=Actinosynnema mirum DS... 74 1e-11 UniRef50_B3PHE6 RHS Repeat family n=5 Tax=cellular organisms Rep... 74 1e-11 UniRef50_A9C2K9 Putative uncharacterized protein n=1 Tax=Delftia... 74 1e-11 UniRef50_A9BX63 YD repeat protein n=2 Tax=cellular organisms Rep... 74 2e-11 UniRef50_Q12LF5 Putative uncharacterized protein n=1 Tax=Shewane... 74 2e-11 UniRef50_B4SR21 YD repeat protein n=2 Tax=Stenotrophomonas malto... 73 2e-11 UniRef50_B9XHG9 YD repeat protein n=1 Tax=bacterium Ellin514 Rep... 73 2e-11 UniRef50_C5ID01 RhsK n=50 Tax=cellular organisms RepID=C5ID01_ECOLX 73 2e-11 UniRef50_A9GLF7 Conserved exported carbohydrate-binding protein,... 73 2e-11 UniRef50_Q4ZU10 YD repeat n=2 Tax=Pseudomonas syringae group Rep... 73 2e-11 UniRef50_C6CPH2 YD repeat protein n=11 Tax=Enterobacteriaceae Re... 73 3e-11 UniRef50_Q396B9 Rhs family protein n=1 Tax=Burkholderia sp. 383 ... 73 3e-11 UniRef50_A1AK54 YD repeat protein n=1 Tax=Pelobacter propionicus... 73 3e-11 UniRef50_Q9L0E3 Putative Rhs protein n=2 Tax=Streptomyces RepID=... 72 3e-11 UniRef50_B2PW71 Putative uncharacterized protein n=1 Tax=Provide... 72 3e-11 UniRef50_D1SVF0 Rhs family protein (Fragment) n=1 Tax=Acidovorax... 72 3e-11 UniRef50_D1YPL0 RHS repeat-associated core domain protein n=1 Ta... 72 4e-11 UniRef50_A3RZQ8 Core protein n=21 Tax=Ralstonia solanacearum Rep... 72 4e-11 UniRef50_B4SL73 YD repeat protein n=4 Tax=Stenotrophomonas malto... 72 5e-11 UniRef50_A9GIJ6 Conserved carbohydrate-binding protein, Rhs fami... 72 5e-11 UniRef50_B9M2L6 YD repeat protein n=6 Tax=Geobacter sp. FRC-32 R... 72 6e-11 UniRef50_C1B7W9 Putative uncharacterized protein n=1 Tax=Rhodoco... 71 1e-10 UniRef50_B8FIJ1 YD repeat protein n=1 Tax=Desulfatibacillum alke... 71 1e-10 UniRef50_C3JCI6 Rhs family protein n=4 Tax=Bacteria RepID=C3JCI6... 71 1e-10 UniRef50_A8ZTS1 YD repeat protein n=4 Tax=Desulfococcus oleovora... 70 1e-10 UniRef50_C2LFQ4 Putative uncharacterized protein n=1 Tax=Proteus... 70 2e-10 UniRef50_C7MZM5 Rhs family protein n=1 Tax=Saccharomonospora vir... 70 2e-10 UniRef50_C2M343 Rhs family protein n=2 Tax=Capnocytophaga gingiv... 70 2e-10 UniRef50_B4UB58 RHS protein n=1 Tax=Anaeromyxobacter sp. K RepID... 70 2e-10 UniRef50_B2Q762 Putative uncharacterized protein n=2 Tax=Provide... 69 3e-10 UniRef50_A9EZF2 Conserved carbohydrate-binding protein, Rhs fami... 69 3e-10 UniRef50_D2U9B6 Putative rhs family protein n=1 Tax=Xanthomonas ... 69 4e-10 UniRef50_C6M9F8 RhsG core protein with extension n=1 Tax=Neisser... 69 4e-10 UniRef50_UPI000196D8DA RHS family protein n=1 Tax=Neisseria muco... 69 4e-10 UniRef50_C9PMJ2 Substrate-binding repeat protein n=2 Tax=Pasteur... 69 5e-10 UniRef50_A9C2L0 Putative uncharacterized protein n=1 Tax=Delftia... 69 5e-10 UniRef50_Q8XSL8 Putative rsh-related protein n=1 Tax=Ralstonia s... 69 5e-10 UniRef50_B4V6T6 Rhs protein n=2 Tax=Streptomyces RepID=B4V6T6_9ACTO 69 5e-10 UniRef50_C5B3X8 Putative uncharacterized protein n=1 Tax=Methylo... 68 6e-10 UniRef50_C0FSB7 Putative uncharacterized protein n=1 Tax=Rosebur... 68 7e-10 UniRef50_A7BNN3 Putative uncharacterized protein n=1 Tax=Beggiat... 67 1e-09 UniRef50_Q2Y6N6 RhsD protein n=1 Tax=Nitrosospira multiformis AT... 67 1e-09 UniRef50_D1YPL2 RHS repeat-associated core domain protein n=1 Ta... 67 2e-09 UniRef50_B4UIF2 YD repeat protein n=1 Tax=Anaeromyxobacter sp. K... 67 2e-09 UniRef50_Q2Y592 Peptidase C39, bacteriocin processing n=1 Tax=Ni... 67 2e-09 UniRef50_B3YAC7 YD repeat protein n=3 Tax=Salmonella enterica Re... 67 2e-09 UniRef50_UPI0001BC9640 YD repeat-containing protein n=1 Tax=Pseu... 67 2e-09 UniRef50_UPI0001BC9B6D Rhs family protein n=2 Tax=Pseudomonas sy... 67 2e-09 UniRef50_B8FCM0 YD repeat protein n=1 Tax=Desulfatibacillum alke... 66 2e-09 UniRef50_UPI0001B4DD67 Rhs protein n=1 Tax=Streptomyces hygrosco... 66 2e-09 UniRef50_D1YPK5 RHS repeat-associated core domain protein n=1 Ta... 66 3e-09 UniRef50_D1W844 RHS repeat-associated core domain protein (Fragm... 66 4e-09 UniRef50_Q4UTI1 RhsD protein n=4 Tax=Xanthomonas RepID=Q4UTI1_XANC8 65 4e-09 UniRef50_C0FSB4 Putative uncharacterized protein n=1 Tax=Rosebur... 65 4e-09 UniRef50_UPI0001AF39C0 YD repeat-containing protein n=1 Tax=Pseu... 65 5e-09 UniRef50_B3E8D4 YD repeat protein n=1 Tax=Geobacter lovleyi SZ R... 65 6e-09 UniRef50_Q7MZK7 Similar to the N-terminal region of RhsC protein... 65 7e-09 UniRef50_B8JCD4 YD repeat protein n=2 Tax=Anaeromyxobacter dehal... 65 8e-09 UniRef50_B7X4I1 Putative uncharacterized protein n=1 Tax=Comamon... 65 8e-09 UniRef50_B4VFT3 Rhs protein n=4 Tax=Bacteria RepID=B4VFT3_9ACTO 65 8e-09 UniRef50_UPI0001B52689 Rhs core protein with extension n=1 Tax=S... 64 1e-08 UniRef50_Q2Y6W6 RhsD protein n=1 Tax=Nitrosospira multiformis AT... 64 1e-08 UniRef50_B1HKQ3 Rhs family protein n=1 Tax=Burkholderia pseudoma... 64 1e-08 UniRef50_D2KTW4 Putative uncharacterized protein n=2 Tax=Strepto... 64 1e-08 UniRef50_D0KFB3 Putative uncharacterized protein n=1 Tax=Pectoba... 64 1e-08 UniRef50_D1WVZ1 YD repeat protein n=1 Tax=Streptomyces sp. ACT-1... 64 2e-08 UniRef50_Q7UK50 Probable wall-associated protein n=1 Tax=Rhodopi... 63 2e-08 UniRef50_Q2SM81 Rhs family protein n=1 Tax=Hahella chejuensis KC... 63 3e-08 UniRef50_UPI0001B52686 Rhs core protein with extension n=1 Tax=S... 63 3e-08 UniRef50_A6EH31 Rhs family protein n=2 Tax=cellular organisms Re... 63 3e-08 UniRef50_B5S3N8 Rhs-related protein n=1 Tax=Ralstonia solanacear... 62 4e-08 UniRef50_Q07833 Wall-associated protein n=18 Tax=Bacillaceae Rep... 62 4e-08 UniRef50_C5ALD9 Rhs family protein n=1 Tax=Burkholderia glumae B... 62 4e-08 >UniRef50_P77779 Putative uncharacterized protein ybfO n=67 Tax=Enterobacteriaceae RepID=YBFO_ECOLI Length = 477 Score = 984 bits (2545), Expect = 0.0, Method: Compositional matrix adjust. Identities = 477/477 (100%), Positives = 477/477 (100%) Query: 1 MWPDNRIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQ 60 MWPDNRIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQ Sbjct: 1 MWPDNRIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQ 60 Query: 61 YAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRT 120 YAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRT Sbjct: 61 YAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRT 120 Query: 121 RIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRL 180 RIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRL Sbjct: 121 RIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRL 180 Query: 181 ESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEG 240 ESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEG Sbjct: 181 ESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEG 240 Query: 241 ATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEESGLYYNRHRYYDPLQGRYITQDP 300 ATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEESGLYYNRHRYYDPLQGRYITQDP Sbjct: 241 ATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEESGLYYNRHRYYDPLQGRYITQDP 300 Query: 301 IGLKGGWNFYQYPLNPVQYIDSMGLASKYGHLNNGGYGARPNKPPTPDPSKLPDIAKQLR 360 IGLKGGWNFYQYPLNPVQYIDSMGLASKYGHLNNGGYGARPNKPPTPDPSKLPDIAKQLR Sbjct: 301 IGLKGGWNFYQYPLNPVQYIDSMGLASKYGHLNNGGYGARPNKPPTPDPSKLPDIAKQLR 360 Query: 361 LPYPIDQASSAPNVFKTFFRALSPYDYTLYCRKWVKPNLTCTPQDDSQYPGMDTKTASDY 420 LPYPIDQASSAPNVFKTFFRALSPYDYTLYCRKWVKPNLTCTPQDDSQYPGMDTKTASDY Sbjct: 361 LPYPIDQASSAPNVFKTFFRALSPYDYTLYCRKWVKPNLTCTPQDDSQYPGMDTKTASDY 420 Query: 421 LPQTNWPTTQLPPGYTCAEPYLFPDINKPDGPATAGIDDLGEILAKMKQRTSRGIRK 477 LPQTNWPTTQLPPGYTCAEPYLFPDINKPDGPATAGIDDLGEILAKMKQRTSRGIRK Sbjct: 421 LPQTNWPTTQLPPGYTCAEPYLFPDINKPDGPATAGIDDLGEILAKMKQRTSRGIRK 477 >UniRef50_Q328Z1 RhsA protein in rhs element n=7 Tax=Enterobacteriaceae RepID=Q328Z1_SHIDS Length = 1213 Score = 652 bits (1682), Expect = 0.0, Method: Compositional matrix adjust. Identities = 316/339 (93%), Positives = 322/339 (94%), Gaps = 4/339 (1%) Query: 1 MWPDNRIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQ 60 MWPDNRIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQ Sbjct: 847 MWPDNRIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQ 906 Query: 61 YAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRT 120 YAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKP+VTWYGWDGDRLTTIQNDRT Sbjct: 907 YAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPEVTWYGWDGDRLTTIQNDRT 966 Query: 121 RIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRL 180 RIQTIYQPGSFTPLIRVETATGELAKTQRRSLAD LQQSGGEDGGSVVFPPVLVQMLDRL Sbjct: 967 RIQTIYQPGSFTPLIRVETATGELAKTQRRSLADALQQSGGEDGGSVVFPPVLVQMLDRL 1026 Query: 181 ESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEG 240 ESEILADRVSEESRRWLASCGLTV QMQ+QMDPVYTPARKIHLYHCDH GLPLALVSTEG Sbjct: 1027 ESEILADRVSEESRRWLASCGLTVAQMQSQMDPVYTPARKIHLYHCDHHGLPLALVSTEG 1086 Query: 241 ATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEESGLYYNRHRYYDPLQGRYITQDP 300 ATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEESGLYYNRHRYYDPLQGRYITQDP Sbjct: 1087 ATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEESGLYYNRHRYYDPLQGRYITQDP 1146 Query: 301 IGLKGGWNFYQYPLNPVQYIDSMGLA----SKYGHLNNG 335 IGLKGGWN Y Y LNP+ ID +GL+ +K G NG Sbjct: 1147 IGLKGGWNLYGYQLNPISDIDPLGLSMWEDAKSGACTNG 1185 >UniRef50_Q31U53 Putative uncharacterized protein n=1 Tax=Shigella boydii Sb227 RepID=Q31U53_SHIBS Length = 927 Score = 646 bits (1666), Expect = 0.0, Method: Compositional matrix adjust. Identities = 309/325 (95%), Positives = 316/325 (97%) Query: 1 MWPDNRIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQ 60 MWPDNRIARDAHYLYRYDRHGRLTEKTDLIPEG IRTDDERTH YHYDSQHRLVHYTRTQ Sbjct: 578 MWPDNRIARDAHYLYRYDRHGRLTEKTDLIPEGGIRTDDERTHWYHYDSQHRLVHYTRTQ 637 Query: 61 YAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRT 120 YAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKP+VTWYGWDGDRLTTIQNDRT Sbjct: 638 YAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPEVTWYGWDGDRLTTIQNDRT 697 Query: 121 RIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRL 180 RIQT+YQPGSFTPLIRVETATGELAKTQRRSLAD LQQSGGEDGGSVVFPPVLVQMLDRL Sbjct: 698 RIQTVYQPGSFTPLIRVETATGELAKTQRRSLADALQQSGGEDGGSVVFPPVLVQMLDRL 757 Query: 181 ESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEG 240 ESEILADRVSEESRRWLASCGLTV QM+NQMDPVYTPARKIHLYHCDHRGLPL L+STEG Sbjct: 758 ESEILADRVSEESRRWLASCGLTVAQMKNQMDPVYTPARKIHLYHCDHRGLPLVLISTEG 817 Query: 241 ATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEESGLYYNRHRYYDPLQGRYITQDP 300 ATEWCAEYDEWGNLLNEENPH LQQLIRLPGQQYDEESGLYYNRHRYYDPLQGRYITQDP Sbjct: 818 ATEWCAEYDEWGNLLNEENPHHLQQLIRLPGQQYDEESGLYYNRHRYYDPLQGRYITQDP 877 Query: 301 IGLKGGWNFYQYPLNPVQYIDSMGL 325 IGLKGGWNFYQYPL+PV +D +GL Sbjct: 878 IGLKGGWNFYQYPLSPVNSMDPLGL 902 >UniRef50_P16919 Protein rhsD n=261 Tax=Bacteria RepID=RHSD_ECOLI Length = 1426 Score = 551 bits (1419), Expect = e-155, Method: Compositional matrix adjust. Identities = 261/335 (77%), Positives = 286/335 (85%) Query: 1 MWPDNRIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQ 60 +WPDNRIA DAHY+YR+D +GRLTEKTD IP GVIRTDDERTH YHYDSQHRLV YTR Q Sbjct: 934 VWPDNRIAEDAHYVYRHDEYGRLTEKTDRIPAGVIRTDDERTHHYHYDSQHRLVFYTRIQ 993 Query: 61 YAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRT 120 + EPLVESRYLYDPLGRR+AKRVWRRERDLTGWMSLSRKP+VTWYGWDGDRLTT+Q D T Sbjct: 994 HGEPLVESRYLYDPLGRRMAKRVWRRERDLTGWMSLSRKPEVTWYGWDGDRLTTVQTDTT 1053 Query: 121 RIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRL 180 RIQT+Y+PGSFTPLIRVET GE K QRRSLA+TLQQ G E+G VVFP LV++LDRL Sbjct: 1054 RIQTVYEPGSFTPLIRVETENGEREKAQRRSLAETLQQEGSENGHGVVFPAELVRLLDRL 1113 Query: 181 ESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEG 240 E EI ADRVS ESR WLA CGLTVEQ+ Q++P YTPARK HLYHCDHRGLPLAL+S +G Sbjct: 1114 EEEIRADRVSSESRAWLAQCGLTVEQLARQVEPEYTPARKAHLYHCDHRGLPLALISEDG 1173 Query: 241 ATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEESGLYYNRHRYYDPLQGRYITQDP 300 T W AEYDEWGN LNEENPH + Q RLPGQQ+DEESGLYYNRHRYYDPLQGRYITQDP Sbjct: 1174 NTAWSAEYDEWGNQLNEENPHHVYQPYRLPGQQHDEESGLYYNRHRYYDPLQGRYITQDP 1233 Query: 301 IGLKGGWNFYQYPLNPVQYIDSMGLASKYGHLNNG 335 +GLKGGWN YQYPLNP+Q ID MGL + +G Sbjct: 1234 MGLKGGWNLYQYPLNPLQQIDPMGLLQTWDDARSG 1268 >UniRef50_UPI0001B52C8C protein, rhs-like protein n=4 Tax=Enterobacteriaceae RepID=UPI0001B52C8C Length = 243 Score = 506 bits (1303), Expect = e-142, Method: Compositional matrix adjust. Identities = 243/243 (100%), Positives = 243/243 (100%) Query: 235 LVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEESGLYYNRHRYYDPLQGR 294 LVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEESGLYYNRHRYYDPLQGR Sbjct: 1 LVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEESGLYYNRHRYYDPLQGR 60 Query: 295 YITQDPIGLKGGWNFYQYPLNPVQYIDSMGLASKYGHLNNGGYGARPNKPPTPDPSKLPD 354 YITQDPIGLKGGWNFYQYPLNPVQYIDSMGLASKYGHLNNGGYGARPNKPPTPDPSKLPD Sbjct: 61 YITQDPIGLKGGWNFYQYPLNPVQYIDSMGLASKYGHLNNGGYGARPNKPPTPDPSKLPD 120 Query: 355 IAKQLRLPYPIDQASSAPNVFKTFFRALSPYDYTLYCRKWVKPNLTCTPQDDSQYPGMDT 414 IAKQLRLPYPIDQASSAPNVFKTFFRALSPYDYTLYCRKWVKPNLTCTPQDDSQYPGMDT Sbjct: 121 IAKQLRLPYPIDQASSAPNVFKTFFRALSPYDYTLYCRKWVKPNLTCTPQDDSQYPGMDT 180 Query: 415 KTASDYLPQTNWPTTQLPPGYTCAEPYLFPDINKPDGPATAGIDDLGEILAKMKQRTSRG 474 KTASDYLPQTNWPTTQLPPGYTCAEPYLFPDINKPDGPATAGIDDLGEILAKMKQRTSRG Sbjct: 181 KTASDYLPQTNWPTTQLPPGYTCAEPYLFPDINKPDGPATAGIDDLGEILAKMKQRTSRG 240 Query: 475 IRK 477 IRK Sbjct: 241 IRK 243 >UniRef50_UPI0001C341D4 protein RhsA n=1 Tax=Citrobacter youngae ATCC 29220 RepID=UPI0001C341D4 Length = 1365 Score = 462 bits (1190), Expect = e-129, Method: Compositional matrix adjust. Identities = 225/330 (68%), Positives = 258/330 (78%), Gaps = 7/330 (2%) Query: 1 MWPDNRIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQ 60 +W DNRI DA YLYRYDR+GRLTEKTD IP+G IR DERTHRY YD+QHRLVH RTQ Sbjct: 900 IWADNRITEDAQYLYRYDRYGRLTEKTDRIPDGAIRMYDERTHRYSYDNQHRLVHCVRTQ 959 Query: 61 YAEPLVESRYLYDPLGRRVAKRVWRRERDLTGW----MSLSRKPQVTWYGWDGDRLTTIQ 116 + E E RY+YDP GRRV KRVW+RE W +LS +P TWYGWDGDRLTT Q Sbjct: 960 HGETQAEGRYIYDPQGRRVGKRVWKREP--VHWSDTRTALSHRPYTTWYGWDGDRLTTTQ 1017 Query: 117 NDRTRIQTIYQPGSFTPLIRVETATGELAKTQR-RSLADTLQQSGGEDGGSVVFPPVLVQ 175 +TR+QTIY+PGSFTPLIRVETAT L +R R+LA+ L+Q G DG VVFPP LV Sbjct: 1018 TAQTRVQTIYEPGSFTPLIRVETATEALDALRRHRTLAEKLRQEGSGDGAGVVFPPALVN 1077 Query: 176 MLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLAL 235 MLDRLE E+ A +S+ +R+WLA CGLT EQM QM+P+ P R +HLYHCDHRGLPLAL Sbjct: 1078 MLDRLEGELRAGVISDANRQWLAGCGLTPEQMAAQMEPLPVPERTLHLYHCDHRGLPLAL 1137 Query: 236 VSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEESGLYYNRHRYYDPLQGRY 295 +S +GA W AEYDEWGN+L E+NPH LQQLIRLPGQQYD+ESGL+YNRHRYY+P GRY Sbjct: 1138 ISQDGAISWRAEYDEWGNVLREDNPHNLQQLIRLPGQQYDDESGLHYNRHRYYNPGLGRY 1197 Query: 296 ITQDPIGLKGGWNFYQYPLNPVQYIDSMGL 325 ITQDPIGLKGGWN Y+YPLNPV+YID GL Sbjct: 1198 ITQDPIGLKGGWNLYKYPLNPVEYIDPSGL 1227 >UniRef50_C1M8X5 Core protein n=2 Tax=Citrobacter RepID=C1M8X5_9ENTR Length = 1359 Score = 459 bits (1180), Expect = e-127, Method: Compositional matrix adjust. Identities = 223/328 (67%), Positives = 260/328 (79%), Gaps = 3/328 (0%) Query: 1 MWPDNRIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQ 60 +W DNRI DA YLYRYDR+GRLTEKTD IP+G IR DERTHRY YD+QHRLVHY RTQ Sbjct: 901 VWADNRITEDAQYLYRYDRYGRLTEKTDRIPDGAIRMYDERTHRYSYDNQHRLVHYLRTQ 960 Query: 61 YAEPLVESRYLYDPLGRRVAKRVWRRERDL--TGWMSLSRKPQVTWYGWDGDRLTTIQND 118 Y + E RYLYDPLGRR+ K++W+RER+ M+LS +P TWYGWDGDRLTT Q Sbjct: 961 YGKKQAEGRYLYDPLGRRIGKQMWKREREHPDHDQMALSHRPYTTWYGWDGDRLTTTQTA 1020 Query: 119 RTRIQTIYQPGSFTPLIRVETATGELAKTQR-RSLADTLQQSGGEDGGSVVFPPVLVQML 177 + R+QTIY+PGSFTPLIRVETAT L +R R+LA+ L+Q G EDG VVFPP LVQML Sbjct: 1021 QRRVQTIYEPGSFTPLIRVETATEALDALRRHRTLAEKLRQEGSEDGAGVVFPPALVQML 1080 Query: 178 DRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVS 237 DRLE E+ A +S+E+R+WLA CGLT EQM QM+P+ P R ++LYHCDHRGLPLAL+ Sbjct: 1081 DRLEGEMRAGVISDENRQWLAGCGLTPEQMVAQMEPLPVPERTLYLYHCDHRGLPLALIR 1140 Query: 238 TEGATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEESGLYYNRHRYYDPLQGRYIT 297 +GA W AEYDEWGN+L E+NPH LQQLIRLPGQQYD+ESGL+YNRHRYY+P GRYIT Sbjct: 1141 QDGAISWRAEYDEWGNVLREDNPHNLQQLIRLPGQQYDDESGLHYNRHRYYNPGLGRYIT 1200 Query: 298 QDPIGLKGGWNFYQYPLNPVQYIDSMGL 325 QDPIGL GG N YQYPLNPV +D +GL Sbjct: 1201 QDPIGLAGGLNPYQYPLNPVTEVDPLGL 1228 >UniRef50_B5PJT7 Protein RhsD n=2 Tax=Enterobacteriaceae RepID=B5PJT7_SALET Length = 429 Score = 378 bits (970), Expect = e-103, Method: Compositional matrix adjust. Identities = 185/286 (64%), Positives = 211/286 (73%), Gaps = 10/286 (3%) Query: 58 RTQYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGW----MSLSRKPQVTWYGWDGDRLT 113 R Q+ E RYLYDPLGRRV KRVW+RE L W M LSR+P VTWYGW+GDRLT Sbjct: 2 RIQHNTIQAEGRYLYDPLGRRVGKRVWKRE--LVHWSNTRMELSRRPYVTWYGWEGDRLT 59 Query: 114 TIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVL 173 TIQ ++RIQT+Y PGSFTPL+R+ET E AK Q RSLA+ L Q G EDG +V P L Sbjct: 60 TIQTGQSRIQTVYAPGSFTPLVRIETDAAEQAKAQHRSLAEKLSQEGSEDGQAVQLPAAL 119 Query: 174 VQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPL 233 MLDRLE E+ + VSEESR WLA CGLT EQM Q++P YTP RKIHLYHCD RGLPL Sbjct: 120 TAMLDRLEGELRRNAVSEESRAWLAGCGLTPEQMAGQLEPEYTPQRKIHLYHCDQRGLPL 179 Query: 234 ALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEESGLYYNRHRYYDPLQG 293 AL++ + W EYDEWGNL EENP L+Q+IRLPGQQYDEESGLYYNRHRYY+P QG Sbjct: 180 ALITPDNTVAWRGEYDEWGNLSGEENPAHLEQVIRLPGQQYDEESGLYYNRHRYYNPGQG 239 Query: 294 RYITQDPIGLKGGWNFYQYPLNPVQYIDSMGLA----SKYGHLNNG 335 RYITQDPIGL+GGWN Y YPLNPV ID +GL+ +K G +G Sbjct: 240 RYITQDPIGLRGGWNLYNYPLNPVSEIDPLGLSMWDDAKSGSCTDG 285 >UniRef50_O52663 Core protein (Fragment) n=5 Tax=Enterobacteriaceae RepID=O52663_ECOLX Length = 350 Score = 319 bits (817), Expect = 2e-85, Method: Compositional matrix adjust. Identities = 152/210 (72%), Positives = 170/210 (80%) Query: 120 TRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDR 179 TRIQT+YQPGSF PLIR+ET GE K QRRSLA+ LQQ G EDG VVFP LV++LDR Sbjct: 1 TRIQTVYQPGSFAPLIRIETDNGEREKAQRRSLAEKLQQEGSEDGHGVVFPAELVRLLDR 60 Query: 180 LESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTE 239 LE EI ADRVS ESR WLA CGLTVEQ+ Q++P YTPARK+H YHCDHRGLPLAL+S + Sbjct: 61 LEEEIRADRVSSESRAWLAQCGLTVEQLARQVEPEYTPARKVHFYHCDHRGLPLALISED 120 Query: 240 GATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEESGLYYNRHRYYDPLQGRYITQD 299 G T W EYDEWGN LNEENP+ L Q RLPGQQ+DEESGLYYNR+RYYDPLQGRYITQD Sbjct: 121 GNTAWRGEYDEWGNQLNEENPYYLHQPYRLPGQQHDEESGLYYNRNRYYDPLQGRYITQD 180 Query: 300 PIGLKGGWNFYQYPLNPVQYIDSMGLASKY 329 PIGL GGWN Y YPLNP+ +D +GL + Y Sbjct: 181 PIGLAGGWNLYNYPLNPIIRMDPLGLYNLY 210 >UniRef50_A8A655 Rhs family protein n=14 Tax=Enterobacteriaceae RepID=A8A655_ECOHS Length = 314 Score = 302 bits (773), Expect = 2e-80, Method: Compositional matrix adjust. Identities = 140/153 (91%), Positives = 146/153 (95%) Query: 174 VQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPL 233 +QMLDRLESEILADRVSEESRRWLASCGLTVEQM+NQMDPVYTPARKIHLYHCDHRGLPL Sbjct: 1 MQMLDRLESEILADRVSEESRRWLASCGLTVEQMKNQMDPVYTPARKIHLYHCDHRGLPL 60 Query: 234 ALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEESGLYYNRHRYYDPLQG 293 AL+STEGAT WCAEYDEWGNLL++ENPH LQQLIRLPGQQYDEESGLYYNRHRYYDPLQG Sbjct: 61 ALISTEGATAWCAEYDEWGNLLSDENPHHLQQLIRLPGQQYDEESGLYYNRHRYYDPLQG 120 Query: 294 RYITQDPIGLKGGWNFYQYPLNPVQYIDSMGLA 326 RYITQDPIGLKGGWNFYQYPLNPV +D GL Sbjct: 121 RYITQDPIGLKGGWNFYQYPLNPVINVDPQGLV 153 >UniRef50_P32109 Putative uncharacterized protein yibJ n=14 Tax=Bacteria RepID=YIBJ_ECOLI Length = 233 Score = 299 bits (765), Expect = 2e-79, Method: Compositional matrix adjust. Identities = 139/153 (90%), Positives = 145/153 (94%) Query: 174 VQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPL 233 +QMLDRLESEILADRVSEESRRWLASCGLTVEQM+NQMDPVYTPARKIHLYHCDHRGLPL Sbjct: 1 MQMLDRLESEILADRVSEESRRWLASCGLTVEQMKNQMDPVYTPARKIHLYHCDHRGLPL 60 Query: 234 ALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEESGLYYNRHRYYDPLQG 293 AL+STEGAT WCAEYDEWGNLL++ENPH LQQLIRLPGQQYDEESGLYYNRHRYYDPL G Sbjct: 61 ALISTEGATAWCAEYDEWGNLLSDENPHHLQQLIRLPGQQYDEESGLYYNRHRYYDPLLG 120 Query: 294 RYITQDPIGLKGGWNFYQYPLNPVQYIDSMGLA 326 RYITQDPIGLKGGWNFYQYPLNPV +D GL Sbjct: 121 RYITQDPIGLKGGWNFYQYPLNPVINVDPQGLV 153 >UniRef50_UPI0001B52595 rhsE element core protein RshE n=1 Tax=Escherichia sp. 4_1_40B RepID=UPI0001B52595 Length = 273 Score = 212 bits (540), Expect = 2e-53, Method: Compositional matrix adjust. Identities = 95/124 (76%), Positives = 106/124 (85%) Query: 202 LTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPH 261 +TVEQ+ Q++P YTPARK+H YHCDHRGLPLAL+S +G T W EYDEWGN LNEENPH Sbjct: 1 MTVEQLARQVEPEYTPARKVHFYHCDHRGLPLALISEDGNTAWRGEYDEWGNQLNEENPH 60 Query: 262 QLQQLIRLPGQQYDEESGLYYNRHRYYDPLQGRYITQDPIGLKGGWNFYQYPLNPVQYID 321 L Q RLPGQQ+DEESGLYYNRHR+YDPLQGRYIT DPIGL+GGWN YQYPLNP+Q ID Sbjct: 61 HLHQPYRLPGQQHDEESGLYYNRHRHYDPLQGRYITPDPIGLRGGWNMYQYPLNPIQVID 120 Query: 322 SMGL 325 MGL Sbjct: 121 PMGL 124 >UniRef50_B3X3P2 RhsH n=1 Tax=Shigella dysenteriae 1012 RepID=B3X3P2_SHIDY Length = 263 Score = 188 bits (477), Expect = 4e-46, Method: Compositional matrix adjust. Identities = 91/119 (76%), Positives = 98/119 (82%), Gaps = 1/119 (0%) Query: 211 MDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRLP 270 M Y R IHLYHCD+RGLPL L+S +GATEWCAEYDEWGNLLNEENP LQQLIRLP Sbjct: 1 MTLAYRSLRIIHLYHCDYRGLPLTLISPDGATEWCAEYDEWGNLLNEENPQHLQQLIRLP 60 Query: 271 GQQYDEESGLYYNRHRYYDPLQGRYITQDPIGLKGGWNFYQYP-LNPVQYIDSMGLASK 328 GQQYDEESGLYYNRHRYYDPLQGRYITQDPIGL+GGWN Y Y ++P ID +GL K Sbjct: 61 GQQYDEESGLYYNRHRYYDPLQGRYITQDPIGLEGGWNQYVYASIHPTYSIDPLGLIDK 119 >UniRef50_UPI00019F17FA RhsC core protein with extension n=1 Tax=Citrobacter youngae ATCC 29220 RepID=UPI00019F17FA Length = 274 Score = 184 bits (467), Expect = 6e-45, Method: Compositional matrix adjust. Identities = 85/119 (71%), Positives = 97/119 (81%) Query: 207 MQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQL 266 M NQ+ PVYTP RK HLYHCDHRGLPLAL++ +GA W AEYDEWGN+L E+NPH LQ+L Sbjct: 1 MLNQLAPVYTPRRKFHLYHCDHRGLPLALINQDGAISWRAEYDEWGNVLREDNPHNLQRL 60 Query: 267 IRLPGQQYDEESGLYYNRHRYYDPLQGRYITQDPIGLKGGWNFYQYPLNPVQYIDSMGL 325 IRLPGQQ DEESGLYYNRHRY P Q RY+T DPIGL+GG N Y YP NP++ ID +GL Sbjct: 61 IRLPGQQCDEESGLYYNRHRYDSPGQDRYLTLDPIGLEGGLNPYTYPRNPIRKIDPLGL 119 >UniRef50_A9C0N8 YD repeat protein n=5 Tax=cellular organisms RepID=A9C0N8_DELAS Length = 1528 Score = 174 bits (442), Expect = 5e-42, Method: Compositional matrix adjust. Identities = 123/360 (34%), Positives = 165/360 (45%), Gaps = 59/360 (16%) Query: 2 WPDNRIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQY 61 W DNRI ++RYD G + D + HYD H+L+ +Q Sbjct: 1038 WEDNRIGFTEDRVWRYDPCGNRIAQMQA---------DHSQQQLHYDGAHQLIAVRSSQI 1088 Query: 62 ---AEPLVE-SRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQ- 116 AE L SRY YD LGRR+ ++V + + T + +YGWDGDRL + Sbjct: 1089 QGNAEQLRHHSRYTYDALGRRLKQQVESADGNPT---------RTHYYGWDGDRLIHTER 1139 Query: 117 ---NDRTRI--QTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPP 171 D TR TIY+PGSFTPL+R+ T + + L + +G D P Sbjct: 1140 QQHGDDTRHIEHTIYEPGSFTPLVRLSTTASGDPQNEPHLLVQAIA-AGLPDQDDPNHRP 1198 Query: 172 VLVQMLDRLES-------------------------EILADRVSEESRRWLASCGLTVEQ 206 L M L + + + +E + R L+ +++ Sbjct: 1199 ALALMQTMLSAMPRDMQQDAARHLRHTLEHGLPPGAQAMLGEQAESTARLLSGMQAKLQE 1258 Query: 207 MQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQL 266 + + IH YHCDH G P+AL G W A+ D WGN+L E NP + Q Sbjct: 1259 QEKEQHARIA----IHHYHCDHLGTPMALTDQTGQVAWAAKLDPWGNVLQEYNPQGIHQA 1314 Query: 267 IRLPGQQYDEESGLYYNRHRYYDPLQGRYITQDPIGLKGGWNFYQYP-LNPVQYIDSMGL 325 IRLPGQ +D E+GLYYNRHRYYDP+ G Y+ QDPIGL GG N Y +P ID GL Sbjct: 1315 IRLPGQHHDRETGLYYNRHRYYDPVVGSYVNQDPIGLAGGVNKILYSESSPTSKIDPTGL 1374 >UniRef50_D1T3Q3 YD repeat protein (Fragment) n=2 Tax=Acidovorax avenae subsp. avenae ATCC 19860 RepID=D1T3Q3_9BURK Length = 561 Score = 165 bits (417), Expect = 4e-39, Method: Compositional matrix adjust. Identities = 124/340 (36%), Positives = 172/340 (50%), Gaps = 44/340 (12%) Query: 15 YRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVE--SRYLY 72 YRYD G + + TD R R YD+ HRL + + E + + Y Y Sbjct: 83 YRYDAFGNRVQ--------ALHTDG-RAQRLRYDALHRLREVWQREAGEAGWQRVACYRY 133 Query: 73 DPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWY-GWDGDRLTTIQNDRTRIQTIYQPGSF 131 DP GRR+AK V+ D + + + +P T Y GWDGDRL + + +Y+PGSF Sbjct: 134 DPFGRRLAKTVFGHGNDNS---NAAAEPSTTTYAGWDGDRLVHTEGPQGLQHVLYEPGSF 190 Query: 132 TPLIRVE------TATGEL--AKTQRRSLADTLQQSGGEDGGSVVF---PPVLVQMLDRL 180 PL+R+E TA L + R S+AD GGE +V+F P ++L+R Sbjct: 191 APLLRLEREQAIPTAMQALLVMEEDRGSVADD-GPDGGESPAAVLFAGLPRTQRELLERA 249 Query: 181 -------ESEILADRVS----EESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHR 229 + + L R+ +E+ LA+ +V Q Q A +I + CDH Sbjct: 250 LQDATGPQGDALLARLQAGLPDEAGALLAAGVQSVRQQQQAA--TQAHATRIRHFLCDHL 307 Query: 230 GLPLALVSTEG----ATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEESGLYYNRH 285 G P+ALV G W A + WG + E +P + Q IR GQQ D E+GL+YNRH Sbjct: 308 GTPIALVDANGPQAGLVTWAATHHAWGAVREEYDPLGIGQPIRFQGQQLDAETGLHYNRH 367 Query: 286 RYYDPLQGRYITQDPIGLKGGWNFYQYPLNPVQYIDSMGL 325 RYYDP+ G+Y+TQDPIGL GG + YPLNP+Q D +GL Sbjct: 368 RYYDPMLGQYVTQDPIGLMGGIHKQAYPLNPIQASDPLGL 407 >UniRef50_A1TV35 YD repeat protein n=2 Tax=Acidovorax RepID=A1TV35_ACIAC Length = 1679 Score = 161 bits (408), Expect = 4e-38, Method: Compositional matrix adjust. Identities = 123/357 (34%), Positives = 170/357 (47%), Gaps = 53/357 (14%) Query: 2 WPDNRIA-----------RDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQ 50 WP NRI +DA Y+YD G + L P+G R R HYD+ Sbjct: 1192 WPGNRIGWSTVQRADSHQKDALIRYQYDAFGNRVQV--LHPDG-------RIQRLHYDAL 1242 Query: 51 HRLVHYTRTQY---AEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGW 107 H+L + + A L+ S Y YD LGRR++K V+ + L T+ GW Sbjct: 1243 HQLREVCQREQLGGAWRLIAS-YRYDALGRRLSKTVYDQ---------LDHGGTTTYAGW 1292 Query: 108 DGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQ--SGGEDGG 165 DGDRL + + T+Y+PGSF PL+R+E + Q D+ + S G Sbjct: 1293 DGDRLIHTEGAKGFFHTLYEPGSFVPLLRLERSKAIPTAMQVLLALDSTEDDDSDAPALG 1352 Query: 166 SVVFPPVLVQMLDRLESEILADRVSEESRRWLA--SCGLTVEQ---MQNQMDPV------ 214 F + D LE +L + + LA S L ++ + N +D + Sbjct: 1353 RNFFAALPRAQRDLLEG-VLHSAIGTCAEASLANLSSNLPLDVRVLLANGLDEIRGRRTN 1411 Query: 215 YTPARKIHLYH--CDHRGLPLALVST----EGATEWCAEYDEWGNLLNEENPHQLQQLIR 268 + A + H CDH G P+A+V G W A Y WG L E NP+ + Q IR Sbjct: 1412 FARAEDTCIRHILCDHLGTPIAMVDANGRHSGLLTWAATYHSWGALREEYNPNDISQPIR 1471 Query: 269 LPGQQYDEESGLYYNRHRYYDPLQGRYITQDPIGLKGGWNFYQYPLNPVQYIDSMGL 325 GQQ+D E+GL+YNR RYYDP G+Y+TQDPIGL GG + Y YP++P +ID GL Sbjct: 1472 FQGQQFDAETGLHYNRLRYYDPSLGQYLTQDPIGLLGGNDKYIYPVSPTGWIDPTGL 1528 >UniRef50_UPI00019F181C rhsC element core protein RshC n=2 Tax=Enterobacteriaceae RepID=UPI00019F181C Length = 260 Score = 159 bits (402), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 77/111 (69%), Positives = 88/111 (79%), Gaps = 2/111 (1%) Query: 214 VYTPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQ 273 +Y RK+HLY C GL L+ T+G T W AEYDEWGNLLNE+NP LQQLIRLPGQQ Sbjct: 1 MYCKYRKLHLYRCYRLGL--TLIRTDGRTGWRAEYDEWGNLLNEDNPQNLQQLIRLPGQQ 58 Query: 274 YDEESGLYYNRHRYYDPLQGRYITQDPIGLKGGWNFYQYPLNPVQYIDSMG 324 YD+ES LYYNRHRYY+P QGRYITQDPIG+KGG N Y YPLNPV+ +D +G Sbjct: 59 YDDESELYYNRHRYYNPEQGRYITQDPIGMKGGLNSYAYPLNPVESVDPLG 109 >UniRef50_Q3YV37 Putative uncharacterized protein n=1 Tax=Shigella sonnei Ss046 RepID=Q3YV37_SHISS Length = 303 Score = 158 bits (400), Expect = 3e-37, Method: Compositional matrix adjust. Identities = 76/112 (67%), Positives = 86/112 (76%), Gaps = 1/112 (0%) Query: 214 VYTPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQ 273 + TP + ++ +H + +G E EYDEWGNLLNEENPHQLQQLIRLPGQQ Sbjct: 46 ITTPDGRASAFYYNHHSQLTSATGPDGL-EIRREYDEWGNLLNEENPHQLQQLIRLPGQQ 104 Query: 274 YDEESGLYYNRHRYYDPLQGRYITQDPIGLKGGWNFYQYPLNPVQYIDSMGL 325 YDEESGLYYNRHRYYDPLQGRYITQDPIGLKGGWN Y YPL+PV +D +GL Sbjct: 105 YDEESGLYYNRHRYYDPLQGRYITQDPIGLKGGWNLYTYPLSPVNSMDPLGL 156 >UniRef50_P77759 Putative uncharacterized protein ylbH n=12 Tax=Escherichia coli RepID=YLBH_ECOLI Length = 236 Score = 150 bits (380), Expect = 7e-35, Method: Compositional matrix adjust. Identities = 69/94 (73%), Positives = 77/94 (81%) Query: 233 LALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEESGLYYNRHRYYDPLQ 292 LAL+ +G W EYDEWGN LNEENPH L Q RLPGQQYD+ESGLYYNR+RYYDPLQ Sbjct: 2 LALMDADGNIAWSGEYDEWGNQLNEENPHHLHQPYRLPGQQYDKESGLYYNRNRYYDPLQ 61 Query: 293 GRYITQDPIGLKGGWNFYQYPLNPVQYIDSMGLA 326 GRYITQDPIGL+GGW+ Y YPLNPV ID +GL+ Sbjct: 62 GRYITQDPIGLEGGWSLYAYPLNPVNGIDPLGLS 95 >UniRef50_D1T3N5 YD repeat protein n=1 Tax=Acidovorax avenae subsp. avenae ATCC 19860 RepID=D1T3N5_9BURK Length = 598 Score = 149 bits (377), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 121/359 (33%), Positives = 158/359 (44%), Gaps = 49/359 (13%) Query: 2 WPDNRIA-----RDAH-----YLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQH 51 WP NRI RD+ YRYD G + D R R YD+ H Sbjct: 116 WPGNRIGWSTPERDSDGQGTPIRYRYDAFGNRVQALHA---------DGRAQRLRYDALH 166 Query: 52 RLVHYTRTQYAEPLVE--SRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDG 109 +L + + + + Y YDP GRR+A+ V R G + T+ GWDG Sbjct: 167 QLREVWQREGTRGAWQRVACYRYDPFGRRLARTVIGDSRYNHG--AALGSAATTYAGWDG 224 Query: 110 DRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVF 169 DRL ++ + +Y+P SF PL+R+E Q L+ GGE + +F Sbjct: 225 DRLMHVEGPQGLQHILYEPDSFVPLLRLERDRAIPTPVQAMF---ALENQGGESHAAALF 281 Query: 170 PPV-------LVQML--------DRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPV 214 + L Q L D L + + A E L S GL Q Q Sbjct: 282 GELPRAQREWLEQTLNDALGPHGDALRARLQAGLPEETGV--LLSAGLRSVHQQRQSAAQ 339 Query: 215 YTPARKIHLYHCDHRGLPLALVSTEG----ATEWCAEYDEWGNLLNEENPHQLQQLIRLP 270 R H+ CDH G P+ALV G W A Y WG + E +PH + Q IR Sbjct: 340 AHATRIRHVL-CDHLGTPIALVDANGPQAGLVTWAATYHAWGAVREEYDPHGIGQDIRFQ 398 Query: 271 GQQYDEESGLYYNRHRYYDPLQGRYITQDPIGLKGGWNFYQYP-LNPVQYIDSMGLASK 328 GQQ+D E+GL+YNR RYYDP+ G+Y+TQDPIGLKGG N Y +P D GL K Sbjct: 399 GQQFDAETGLHYNRFRYYDPMLGQYVTQDPIGLKGGLNKSNYSGSSPAINCDPKGLDFK 457 >UniRef50_C5CZG8 RHS protein n=1 Tax=Variovorax paradoxus S110 RepID=C5CZG8_VARPS Length = 1609 Score = 131 bits (329), Expect = 7e-29, Method: Compositional matrix adjust. Identities = 94/298 (31%), Positives = 130/298 (43%), Gaps = 67/298 (22%) Query: 56 YTRTQYAEPLVES-RYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTT 114 + R + AE E+ + YD LGRR+AKR T +GWDGD L Sbjct: 1248 FNRMRSAETFGETTSFSYDALGRRIAKR---------------SSHATTLFGWDGDTLAF 1292 Query: 115 IQNDRTR------------IQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGE 162 T + I++PGSF PL+++ A +A +Q + + +GG Sbjct: 1293 ESTQSTEGQQELQAWRGDSVHYIHEPGSFVPLVQIRQAQA-VALSQTTDVKALIAANGGR 1351 Query: 163 DGGSVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIH 222 +I E+ W EQ++ P +I Sbjct: 1352 -------------------YDI------EQDPLW------NGEQLKT---PQAFAREEIA 1377 Query: 223 LYHCDHRGLPLALVSTEGATEWCAEYDEWGN----LLNEENPHQLQQLIRLPGQQYDEES 278 Y CDH G P L EG W A+Y WG + + IR GQ +D+E+ Sbjct: 1378 FYQCDHLGTPQELTDHEGRIAWSAQYKAWGEAKQAISEAGRKAGFRNPIRFQGQYFDDET 1437 Query: 279 GLYYNRHRYYDPLQGRYITQDPIGLKGGWNFYQYPLNPVQYIDSMGLASKYGHLNNGG 336 GL+YNRHRYYDP GR++++DPIGL GG N QY NP+ +ID +GLA K NN G Sbjct: 1438 GLHYNRHRYYDPSCGRFVSKDPIGLAGGSNLQQYAPNPLGWIDPLGLAGKGITPNNKG 1495 >UniRef50_A9AE26 Rhs family protein n=10 Tax=cellular organisms RepID=A9AE26_BURM1 Length = 1547 Score = 127 bits (318), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 95/322 (29%), Positives = 129/322 (40%), Gaps = 78/322 (24%) Query: 15 YRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYLYDP 74 + YD G L K P G Y +D+ +RL+ R E+RY YD Sbjct: 1171 FEYDARGNLVRKR--TPAG--------EQEYEWDAFNRLLS-ARVAETSRQSEARYFYDA 1219 Query: 75 LGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQPGSFTPL 134 GRR+AK V + T +GWDGD L + IY+PG+F PL Sbjct: 1220 FGRRIAKEV---------------NGERTVFGWDGDTLAYESDGERGTHYIYEPGTFVPL 1264 Query: 135 IRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSEESR 194 + V PV V E+ Sbjct: 1265 AQY------------------------------VAEPV----------------VGIETP 1278 Query: 195 RWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNL 254 W +S E Q P K+ YHCD G P L +G W A Y WG Sbjct: 1279 EWKSSDRYVPEADPLQKVPQRRADAKLFYYHCDQIGTPQLLTDDDGDVVWEASYKAWGEA 1338 Query: 255 ------LNEENPHQLQQLIRLPGQQYDEESGLYYNRHRYYDPLQGRYITQDPIGLKGGWN 308 ++ + +R GQQ DEE+GL+YNR+RYYDP GR++++DP+G+ GG N Sbjct: 1339 REVIARASKAAGIVARNSLRFQGQQEDEETGLHYNRYRYYDPNSGRFVSKDPVGMVGGIN 1398 Query: 309 FYQYPLNPVQYIDSMGLASKYG 330 YQY N V ++D +GL + G Sbjct: 1399 VYQYAPNAVAWVDPLGLRKRIG 1420 >UniRef50_Q0JZD5 RHS family protein n=9 Tax=Bacteria RepID=Q0JZD5_RALEH Length = 1585 Score = 124 bits (312), Expect = 6e-27, Method: Compositional matrix adjust. Identities = 105/356 (29%), Positives = 145/356 (40%), Gaps = 96/356 (26%) Query: 4 DNRIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAE 63 DN + + A Y +D G L+ +R + R+ +D+ +RLV + Sbjct: 1180 DNLLKQYAGTHYEWDERGNLS----------LRVVNGVHERFAWDAFNRLV-----GWHN 1224 Query: 64 PLVESRYLYDPLGRRVAK-------------RVWRRERDLTGWMSLSRKPQVTWYGWDGD 110 P VE RY YD LGRR++K ++RR ++ T YGWDGD Sbjct: 1225 PKVEVRYRYDALGRRLSKSSSANYFENQNDGEIYRRNERAR--LNQEYGCAFTLYGWDGD 1282 Query: 111 RLT--------TIQNDRTRI--------QTIYQPGSFTPLIRVETATGELAKTQRRSLAD 154 +L D RI +Y+PGS PL A+ RR D Sbjct: 1283 QLAWESRQEPEAGVGDHFRIIPGAERTTHYLYEPGSLVPL----------AQAVRREAID 1332 Query: 155 TLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPV 214 L + E + P+ + + E LA W Sbjct: 1333 LLPEPAWEGDYDLDDDPLWTREIAPQPFEALA---------W------------------ 1365 Query: 215 YTPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGN----LLNEENPHQLQQLIRLP 270 Y CDH G P L G W A+Y WG + N +Q +R Sbjct: 1366 ---------YQCDHLGTPQELTDEAGELAWSAQYKAWGAAQEAISNAARKAGIQNPLRFQ 1416 Query: 271 GQQYDEESGLYYNRHRYYDPLQGRYITQDPIGLKGGWNFYQYPLNPVQYIDSMGLA 326 GQ YD E+GL+YNRHRYYDP GR++++DPIGL GG N QY NP+ ++D +GLA Sbjct: 1417 GQYYDHENGLHYNRHRYYDPGTGRFVSKDPIGLAGGLNLNQYAPNPISWVDPLGLA 1472 >UniRef50_Q1LDW7 YD repeat n=2 Tax=Burkholderiaceae RepID=Q1LDW7_RALME Length = 1626 Score = 124 bits (311), Expect = 7e-27, Method: Compositional matrix adjust. Identities = 105/342 (30%), Positives = 144/342 (42%), Gaps = 66/342 (19%) Query: 15 YRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRL--------------------- 53 Y +D +G L +T+ P GV T Y YD+ +RL Sbjct: 1201 YAHDAYGNLVRRTE--PNGV-------TWLYQYDAANRLERADRYATPPPAEALKRIERT 1251 Query: 54 ---VHYTRTQYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGD 110 V + EP ++ R+LYD GRR K V R R L R T++ WDGD Sbjct: 1252 PDGVLHAFPARVEPDMQVRFLYDAFGRRTLKAVERAGR-------LER----TFFTWDGD 1300 Query: 111 RLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSV-VF 169 L + + P + P+ + + TL QS G S+ + Sbjct: 1301 VLLMEERFLQAKPQAFTPHEYQPIPVIREHPEDAHSVPVAQRQHTLAQSHQWQGASLYLH 1360 Query: 170 PPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIH---LYHC 226 P L RL+ ++ E + + G V+ PA+ H Y Sbjct: 1361 EPDSFVPLARLDETLV-----EPAFMATGTDGRYVQ----------VPAKSRHATLFYLN 1405 Query: 227 DHRGLPLALVSTEGATEWCAEYDEWGNLL---NEENPHQLQQLIRLPGQQYDEESGLYYN 283 DH G P LV G W A Y WG L +P + IR PGQ +D E+GL+YN Sbjct: 1406 DHLGTPQELVDESGKVVWLARYKAWGGLKTPRKSTDPTETTNAIRFPGQYHDVETGLHYN 1465 Query: 284 RHRYYDPLQGRYITQDPIGLKGGWNFYQYPLNPVQYIDSMGL 325 RHRYYDP GR+I++DP+GL GG N Y Y NPV ++D +GL Sbjct: 1466 RHRYYDPGSGRFISKDPVGLAGGINVYTYAPNPVGWVDPLGL 1507 >UniRef50_Q147B5 Rhs family protein n=2 Tax=Betaproteobacteria RepID=Q147B5_BURXL Length = 1362 Score = 122 bits (306), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 107/330 (32%), Positives = 143/330 (43%), Gaps = 54/330 (16%) Query: 15 YRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYA----EPLVESRY 70 YRYD G + E TD GV HRY YD +L+ +A +++SR Sbjct: 946 YRYDEVGNVREMTDR-QSGV--------HRYRYDPLGQLIESEHETFALDPAHNILDSRD 996 Query: 71 LYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQPGS 130 L +G RV M + V Y G+ + I TRI+ Y P Sbjct: 997 LSPVVGNRV--------------MQFGQHRYV--YDMHGNVVEKISGAHTRIRLDYSPAH 1040 Query: 131 FTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPP------VLVQMLDRLESEI 184 R+E A T+ R + G + G VF + V +RL SE+ Sbjct: 1041 -----RIERARVARNGTEERV------EYGYDALGRRVFRKNASGITLFVWEGNRLLSEV 1089 Query: 185 LADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEW 244 DR + + + +N + I YH D GLP G T+W Sbjct: 1090 RDDRTFVYVYAHNSFVPVAQIESRNAQNGRARDDLPIRYYHTDQIGLPYESTDDAGRTQW 1149 Query: 245 CAEYDEWGNLLNEENPH--------QLQQLIRLPGQQYDEESGLYYNRHRYYDPLQGRYI 296 A Y WG LL H Q Q +R GQ +DEE+GL+YNRHRYYDP GR++ Sbjct: 1150 RARYAAWGRLLGANGGHEQMHESGRQAHQPLRFQGQYFDEETGLHYNRHRYYDPDAGRFM 1209 Query: 297 TQDPIGLKGGWNFYQYPLNPVQYIDSMGLA 326 TQDPIGL+GG N Y+Y NP ++ID +GLA Sbjct: 1210 TQDPIGLRGGINLYRYAPNPGRWIDPLGLA 1239 Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust. Identities = 40/138 (28%), Positives = 62/138 (44%), Gaps = 31/138 (22%) Query: 5 NRIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEP 64 NR+ + + Y YD HG + EK I R R Y HR+ R + A Sbjct: 1003 NRVMQFGQHRYVYDMHGNVVEK---ISGAHTRI------RLDYSPAHRI---ERARVARN 1050 Query: 65 LVESR--YLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDR-LTTIQNDRTR 121 E R Y YD LGRRV ++ +T + W+G+R L+ +++DRT Sbjct: 1051 GTEERVEYGYDALGRRVFRK---------------NASGITLFVWEGNRLLSEVRDDRTF 1095 Query: 122 IQTIYQPGSFTPLIRVET 139 + +Y SF P+ ++E+ Sbjct: 1096 VY-VYAHNSFVPVAQIES 1112 >UniRef50_A1TQS0 YD repeat protein n=2 Tax=Acidovorax RepID=A1TQS0_ACIAC Length = 1602 Score = 119 bits (298), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 102/324 (31%), Positives = 142/324 (43%), Gaps = 59/324 (18%) Query: 4 DNRIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAE 63 DNR+ + YD HG +T++T G + T +++ H+LV T T++ Sbjct: 1203 DNRLRFYQDLHFEYDIHGNVTKRT----RGNRKAGHHETIELRWNADHQLVESTTTRHGV 1258 Query: 64 PLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQ 123 +RY YD LGRRVAK S + T Y WDGD + Q R Sbjct: 1259 TQA-TRYAYDALGRRVAK---------------SDRFGTTHYLWDGDLMVHSQRGRRGSL 1302 Query: 124 TIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESE 183 IY+P SF PL V+ TGE T S D + G + V Q+ ++ + Sbjct: 1303 FIYEPDSFVPLATVQ-GTGEEQHTY-WSHCDQI-------GAPLELTDVNGQIAWAVDYK 1353 Query: 184 ILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATE 243 + W + V + D V P R+ H P A + Sbjct: 1354 V-----------WGEATLRAVPRSDTGTDGVPGPRRQGH--------GPEAKSHAADSEV 1394 Query: 244 WCAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEESGLYYNRHRYYDPLQGRYITQDPIGL 303 CA P +++Q R GQQ+DEE+GL+YNR RYYDP GR+I++DPIG Sbjct: 1395 VCA-----------REPQRVEQPFRFQGQQFDEETGLHYNRSRYYDPAVGRFISEDPIGF 1443 Query: 304 KGGWNFYQYPLNPVQYIDSMGLAS 327 GG N + YPL+P +ID GLA Sbjct: 1444 LGGINTFIYPLDPYSWIDPTGLAG 1467 >UniRef50_C6EE82 Rhs family protein-like protein n=2 Tax=Escherichia coli RepID=C6EE82_ECOBD Length = 290 Score = 119 bits (297), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 54/59 (91%), Positives = 55/59 (93%) Query: 267 IRLPGQQYDEESGLYYNRHRYYDPLQGRYITQDPIGLKGGWNFYQYPLNPVQYIDSMGL 325 IRLPGQQYDEESGLYYNRHRYYDPLQGRYITQDPIGLKGGWNFYQYPLNPV D +GL Sbjct: 102 IRLPGQQYDEESGLYYNRHRYYDPLQGRYITQDPIGLKGGWNFYQYPLNPVTNTDPLGL 160 >UniRef50_C5CXA7 YD repeat protein n=1 Tax=Variovorax paradoxus S110 RepID=C5CXA7_VARPS Length = 1434 Score = 119 bits (297), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 98/315 (31%), Positives = 134/315 (42%), Gaps = 59/315 (18%) Query: 15 YRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYLYDP 74 Y +DR G LT +T R ++ +D+ RL + + Y YDP Sbjct: 1062 YVFDRAGNLTSRTQ------TRAPNQPALHLAWDTNQRLTQSRWERGPHHGEVTTYGYDP 1115 Query: 75 LGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQPGSFTPL 134 LGRRV KR TW+ WDGD L + Q + P Sbjct: 1116 LGRRVFKR---------------NTTHTTWFFWDGDAL---------LGEACQENALVPK 1151 Query: 135 IRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSEESR 194 + T L +RR D L+Q + V+ P E L D+ Sbjct: 1152 TKKSPVTSLL---ERRKQEDALRQLHAKTREFVLKPGTF-------EPLALIDK------ 1195 Query: 195 RWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNL 254 E + +D AR +H YH D G PL + + +G W YD WG + Sbjct: 1196 ----------EMPPSSVDTSEDTARVLH-YHNDPDGRPLRMTTRDGQIVWAVRYDVWGGI 1244 Query: 255 LNEENPHQLQQLIRLPGQQYDEESGLYYNRHRYYDPLQGRYITQDPIGLKGGWNFYQYPL 314 ++ L Q IR GQQ D E+GL+YNRHRY+DP+ G Y++ DPIGL+GG N Y Y Sbjct: 1245 ARKDC-ELLAQPIRCQGQQEDAETGLFYNRHRYFDPIIGAYVSADPIGLRGGVNPYAYGC 1303 Query: 315 -NPVQYIDSMGLASK 328 NP +ID +GLA+ Sbjct: 1304 SNPYFWIDPLGLAAS 1318 >UniRef50_B2HXH5 Rhs family protein n=5 Tax=Acinetobacter baumannii RepID=B2HXH5_ACIBC Length = 1635 Score = 113 bits (282), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 56/128 (43%), Positives = 73/128 (57%), Gaps = 13/128 (10%) Query: 212 DPVYTPARK------IHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNE-------E 258 DP++ ++ + YHCDH G P + GA W AEY WG E E Sbjct: 1354 DPLWNTVKQSQGFDDVWFYHCDHLGTPQEMSDQTGAIIWKAEYKAWGECKLEQTNSDFFE 1413 Query: 259 NPHQLQQLIRLPGQQYDEESGLYYNRHRYYDPLQGRYITQDPIGLKGGWNFYQYPLNPVQ 318 + IR GQ +DEE+GL+YNR+RYY P GR+I++DPIGL GG+N Y Y NPVQ Sbjct: 1414 KSEIISNNIRFQGQYFDEETGLHYNRYRYYSPYVGRFISKDPIGLLGGFNVYAYTANPVQ 1473 Query: 319 YIDSMGLA 326 ++D GLA Sbjct: 1474 WVDPYGLA 1481 >UniRef50_Q2SPP2 Rhs family protein n=3 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SPP2_HAHCH Length = 1434 Score = 112 bits (281), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 54/117 (46%), Positives = 70/117 (59%), Gaps = 1/117 (0%) Query: 214 VYTPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQ 273 + K++ YH DH G P + +EG W A Y +G L ++ + +R GQ Sbjct: 1104 AFIQDEKVYHYHLDHLGTPQEMTDSEGTLVWSARYKAYGALA-LQDVESVHNPLRFQGQY 1162 Query: 274 YDEESGLYYNRHRYYDPLQGRYITQDPIGLKGGWNFYQYPLNPVQYIDSMGLASKYG 330 YDEE+G +YNRHRYYDP GR+I QDPIGL GG N YQY NPV ++D GL +K G Sbjct: 1163 YDEETGFHYNRHRYYDPQSGRFINQDPIGLLGGANAYQYAPNPVGWVDPFGLTAKPG 1219 >UniRef50_Q2SKM2 Rhs family protein n=3 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SKM2_HAHCH Length = 1552 Score = 110 bits (275), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 103/374 (27%), Positives = 163/374 (43%), Gaps = 87/374 (23%) Query: 15 YRYDRHGRLTEKT---DLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYL 71 + YDRHG T+ + D++ + R +D R R R Q A ESRY Sbjct: 1018 FGYDRHGLFTQASFNGDVLAS-IERDEDGRELR-------------RRQGA---AESRYD 1060 Query: 72 YDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQPGSF 131 YD +GR + RV R+ S +R + + YG+D + +D + T Y+ + Sbjct: 1061 YDVMGRLIRHRVSHRQ-------SKARIIERS-YGYDASGNLALIDDLKKGTTHYR---Y 1109 Query: 132 TPLIRVETATG----ELAKTQRRSLADTLQQSGG-------------EDGGSVVFPP--- 171 L R++T G E A ++ D Q+ G + G+++ Sbjct: 1110 DALDRLKTVEGYCNEEFAFDPAGNILDGQNQAKGNRLNFHGDRHFEYDAAGNLILEKRGK 1169 Query: 172 ---------------VLVQMLDRLESE----ILADRVSEE----SRRWLASCGLTVEQMQ 208 ++ D ++E L R++++ +L + + + + + Sbjct: 1170 GGRLETRYQYNKQNQLIAIEKDGQKTEYQYDALGRRIAKQDAFGKTEFLWNGDVLLSEQR 1229 Query: 209 NQMDPVYT------------PARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLN 256 N + +Y ++++ YH DH G P + + EG W A Y +GNL Sbjct: 1230 NHLHKIYVYEPNSFRPLAFIQDKQVYHYHLDHLGTPQEMTNAEGEVVWSARYKAYGNLA- 1288 Query: 257 EENPHQLQQLIRLPGQQYDEESGLYYNRHRYYDPLQGRYITQDPIGLKGGWNFYQYPLNP 316 ++ +Q +R GQ YDEE+GL+YNRHRYYDP R+I QDP+GL GG N YQY NP Sbjct: 1289 LKDVEDVQNPLRFQGQYYDEETGLHYNRHRYYDPSAARFINQDPVGLLGGDNNYQYAPNP 1348 Query: 317 VQYIDSMGLASKYG 330 + D GL K G Sbjct: 1349 TGWGDPFGLTCKEG 1362 >UniRef50_Q2SFR1 Rhs family protein n=9 Tax=cellular organisms RepID=Q2SFR1_HAHCH Length = 138 Score = 110 bits (275), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 51/110 (46%), Positives = 73/110 (66%), Gaps = 1/110 (0%) Query: 219 RKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEES 278 ++++ YH DH G P + + EG W A Y +GNL ++ +Q +R GQ YDEE+ Sbjct: 30 KQVYHYHLDHLGTPQEMTNAEGEVVWSARYKAYGNLA-LKDVEDVQNPLRFQGQYYDEET 88 Query: 279 GLYYNRHRYYDPLQGRYITQDPIGLKGGWNFYQYPLNPVQYIDSMGLASK 328 GL+YNRHRYYDP R+I QDP GL GG + Y+Y LNP++++D +GL +K Sbjct: 89 GLHYNRHRYYDPSAARFINQDPAGLLGGESNYEYVLNPIEWVDPLGLMAK 138 >UniRef50_B7GX39 Protein rhsD n=4 Tax=Acinetobacter baumannii RepID=B7GX39_ACIB3 Length = 1590 Score = 109 bits (273), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 97/329 (29%), Positives = 145/329 (44%), Gaps = 83/329 (25%) Query: 15 YRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYLYDP 74 Y+YD G +TE +I G + + +D+Q+RL+ LV + Y YD Sbjct: 1147 YQYDVQGNVTE---IIQAG-------KNLKLTWDNQNRLIRSDNN----GLV-TEYGYDV 1191 Query: 75 LGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLT-----TIQNDRTRIQTIYQPG 129 GRR+ K+ + ++T +GWDGD + + Q + T+ IY+P Sbjct: 1192 FGRRLYKKTAK---------------ELTLFGWDGDLMIWESFKSAQTNYTK-HYIYEPD 1235 Query: 130 SFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRV 189 SF PL+ Q+G +D ++ P + + S I D V Sbjct: 1236 SFVPLL----------------------QAGYKDFIQLIETPDYQEYQTKPYS-IYKDPV 1272 Query: 190 SEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWCAEYD 249 W + G T + YHCD G P + + G W D Sbjct: 1273 ------WNRNLG-----------KERTALEQFTFYHCDQVGTPQTMTNIRGECVWEILQD 1315 Query: 250 EWGNL-----LNEENPHQLQQLIRLPGQQYDEESGLYYNRHRYYDPLQGRYITQDPIGLK 304 WG + LN++NP + Q +R GQ YD E+ L+YNR+RYY+P RY+++DPIGL+ Sbjct: 1316 TWGAVSQIKALNQDNPFE-QNNLRFQGQYYDRETELHYNRYRYYEPHSARYVSKDPIGLE 1374 Query: 305 GGWNFYQYPLNPVQYIDSMGLAS-KYGHL 332 GG N Y +P Q+ID GL S YG + Sbjct: 1375 GGMNTSSYVSDPNQWIDPKGLNSFNYGEM 1403 >UniRef50_Q7NY44 Probable Rhs-family protein n=2 Tax=Chromobacterium violaceum RepID=Q7NY44_CHRVO Length = 1513 Score = 109 bits (273), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 55/127 (43%), Positives = 74/127 (58%), Gaps = 10/127 (7%) Query: 212 DPVYTPA------RKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGN----LLNEENPH 261 DP+ PA + ++ YH DH G P AL GA +Y WG + + Sbjct: 1269 DPLRQPAPEPEAPKAVYYYHTDHLGTPQALTDEHGALALEMDYQAWGQAREVIADAAGKA 1328 Query: 262 QLQQLIRLPGQQYDEESGLYYNRHRYYDPLQGRYITQDPIGLKGGWNFYQYPLNPVQYID 321 ++ R GQ +D+ESGL+YNRHRYYDP GR+I++DPIGLKGG N Y Y LNP+ ++D Sbjct: 1329 GIRNPFRFQGQYHDDESGLHYNRHRYYDPEIGRFISRDPIGLKGGINIYGYALNPIVWMD 1388 Query: 322 SMGLASK 328 +GL K Sbjct: 1389 PLGLTGK 1395 Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 44/135 (32%), Positives = 59/135 (43%), Gaps = 29/135 (21%) Query: 5 NRIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEP 64 N +++ A YRYD G L EK R + T R +DS +RL A Sbjct: 1142 NLLSQYAGRHYRYDSRGNLVEK---------RVNGSLT-RLEWDSHNRLSRLI----APD 1187 Query: 65 LVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQT 124 + Y YDPLGRR+AK + + T YGWDGD L D + Sbjct: 1188 GQRTDYHYDPLGRRIAK---------------ISQGEATLYGWDGDVLAFETRDEAAVHY 1232 Query: 125 IYQPGSFTPLIRVET 139 +++P SF PL +V T Sbjct: 1233 LFEPDSFVPLAQVHT 1247 >UniRef50_Q2SFR5 Rhs family protein n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SFR5_HAHCH Length = 471 Score = 109 bits (272), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 52/117 (44%), Positives = 72/117 (61%), Gaps = 1/117 (0%) Query: 214 VYTPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQ 273 + ++++ +H DH G P + + EG W A Y +GNL ++ +Q +R GQ Sbjct: 25 AFIQDKQVYHFHLDHLGTPQEMTNAEGEVVWSARYKAYGNLA-LKDVEDVQNPLRFQGQY 83 Query: 274 YDEESGLYYNRHRYYDPLQGRYITQDPIGLKGGWNFYQYPLNPVQYIDSMGLASKYG 330 YDEE+GL+YNR RYYDP R+I QDP+GL GG N YQY LNP ++D GL +K G Sbjct: 84 YDEETGLHYNRRRYYDPSAARFINQDPVGLLGGDNNYQYALNPTGWVDPYGLTAKPG 140 >UniRef50_B2K1J9 YD repeat protein n=23 Tax=Yersinia RepID=B2K1J9_YERPB Length = 1494 Score = 108 bits (270), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 95/323 (29%), Positives = 138/323 (42%), Gaps = 74/323 (22%) Query: 15 YRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYLYDP 74 Y+ D+ G+L +TD + +R +++ RL + E Y YD Sbjct: 1112 YQLDKAGQLVSRTDRFSQLALR----------WNTFGRLAGIKNEHH-----EHAYTYDA 1156 Query: 75 LGRRVAKRVWRRERDLTGWMSL------SRKPQV----TWYGWDGDRLTTIQNDRTRIQT 124 LGRRV KR +R L + + SR V TW+ WDGD + +Q Sbjct: 1157 LGRRVGKRHLQRPTKLLDGLRVIDKETPSRGEPVWQDETWFMWDGDVMVG------ELQR 1210 Query: 125 IYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEI 184 P TP ++ + G V V D E Sbjct: 1211 EVAPRVVTP------------------------ETWDKPDGIVYSAQFYVYQPDSFEPRA 1246 Query: 185 LA--DRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGAT 242 L +V+E +A G +I+ Y D G+P+ L EG Sbjct: 1247 LQRYQQVAEAEDGEIAPLG----------------EEQIYFYQNDPNGMPIRLQDGEGEV 1290 Query: 243 EWCAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEESGLYYNRHRYYDPLQGRYITQDPIG 302 W A++ +G L + QL+Q +R+ GQ YD ESGL+YNR+RYYDP G +I+QDPIG Sbjct: 1291 VWEAQFTPFGQL-SVTGTSQLRQPLRMQGQYYDTESGLHYNRYRYYDPACGVFISQDPIG 1349 Query: 303 LKGGWNFYQYPLNPVQYIDSMGL 325 LKGG N YQ+ +N + ++D +GL Sbjct: 1350 LKGGLNPYQFAVNTLGWVDPLGL 1372 >UniRef50_A1TJG7 YD repeat protein n=4 Tax=Proteobacteria RepID=A1TJG7_ACIAC Length = 1604 Score = 108 bits (270), Expect = 5e-22, Method: Compositional matrix adjust. Identities = 111/419 (26%), Positives = 155/419 (36%), Gaps = 97/419 (23%) Query: 5 NRIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYA-- 62 NR+ + YD GRL K R YD+ HR++ + + Sbjct: 1151 NRVKVLQDKRFDYDGFGRLVRK---------RIGGHTELHCRYDALHRMIAASVIRAGRD 1201 Query: 63 -EPLVES-RYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRT 120 EP+ + RY YDPLGRR+AK E D T + W+G RL Sbjct: 1202 GEPIRQVFRYRYDPLGRRIAK-----EDDFG----------ETRFVWEGMRLLQESRGAH 1246 Query: 121 RIQTIYQPGSFTPLIRV-------------------ETATGELAKTQRRSLADTLQQSGG 161 +Y+P S+ PL R+ E G+ A + RS+ T Sbjct: 1247 NSTYLYEPSSYRPLARIDGTGPLEPEHPVAVLALAGEDPRGDPAAGKVRSIPVT--NGDA 1304 Query: 162 EDGGSVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKI 221 D V PV E E L + G Q Q+ TP+ +I Sbjct: 1305 SDARHAVAGPVGATARYLAEVEALERGAGPDEPGQSTGRGGQARQTQS----ASTPSARI 1360 Query: 222 HLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEE----------------------- 258 + +H GLP + G W A+Y WGN + EE Sbjct: 1361 YYFHLQPSGLPEEMSDRNGHLVWRAQYRLWGNAVAEEWQAFDATGRPVNAPMAETGIRAQ 1420 Query: 259 -NPHQLQQLIRLPGQQYDEESGLYYNRHRYYDPLQGRYITQDPIGLKGGWNFYQYPLNPV 317 + Q +R+ GQ D E+GL+YN RYYDP G + T DPIGL GG N + Y NP+ Sbjct: 1421 VSASPAPQNLRMQGQYLDRETGLHYNTFRYYDPDLGAFTTPDPIGLAGGLNLHGYAANPL 1480 Query: 318 QYIDSMGLASKYGHLNNGGYGARPNKPPTPDPSKLPDIAKQLRLPYPIDQASSAPNVFK 376 +ID G A P+K+ A++ R+ +D A NV + Sbjct: 1481 SWIDPWGWACI--------------------PNKVAGTAREARVGAKLDGKFGASNVLR 1519 >UniRef50_D0KEV6 RHS protein n=2 Tax=Enterobacteriaceae RepID=D0KEV6_PECWW Length = 1348 Score = 107 bits (267), Expect = 9e-22, Method: Compositional matrix adjust. Identities = 63/158 (39%), Positives = 86/158 (54%), Gaps = 18/158 (11%) Query: 178 DRLESEILADR-----VSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLP 232 +RL SEI R +E LA L + +++ +++ YH D GLP Sbjct: 1058 NRLLSEICGSRHHLWIYGDEGFAPLAQVSLQQGETEHEA--------QVYWYHNDVSGLP 1109 Query: 233 LALVSTEGATEWCAEYDEWGNLLNEEN---PHQ--LQQLIRLPGQQYDEESGLYYNRHRY 287 + +G W AEY WGN + E PH + Q +R GQ +D E+GL+YNR RY Sbjct: 1110 REMTGQDGGLVWRAEYRVWGNTVRVEQVEVPHSEPIHQPLRYQGQYFDAETGLHYNRFRY 1169 Query: 288 YDPLQGRYITQDPIGLKGGWNFYQYPLNPVQYIDSMGL 325 YDP GR+++QDPIGL GG N YQY NP+ +ID +GL Sbjct: 1170 YDPDAGRFVSQDPIGLAGGINLYQYAPNPITWIDPLGL 1207 >UniRef50_D1T3N4 YD repeat protein n=2 Tax=Betaproteobacteria RepID=D1T3N4_9BURK Length = 1584 Score = 107 bits (267), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 97/348 (27%), Positives = 132/348 (37%), Gaps = 69/348 (19%) Query: 5 NRIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYT---RTQY 61 NR+ Y YD GRL K R + YD+QHR+ H + Q Sbjct: 1162 NRVKVLQDKRYDYDGFGRLIRK---------RIGGHTELHFRYDAQHRMTHASVIRAGQN 1212 Query: 62 AEPLVES-RYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRT 120 EPL + RY YD +GRR+AK E D T + W+G RL Sbjct: 1213 GEPLRQVFRYHYDAIGRRIAK-----EDDFG----------ATLFTWEGMRLLQECRGGQ 1257 Query: 121 RIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRL 180 +Y+P S+ PL R++ A + A G P R Sbjct: 1258 SSTYLYEPESYVPLARIDGA----GAIEEHPAARYAFGPDARAGKQASVPDTNPDWSSRF 1313 Query: 181 ESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEG 240 + A+ G +V P +++ +H GLP + T G Sbjct: 1314 NAVA-------------ANAGGSVSGTSAPSSAPMEPTAQVYYFHVQPNGLPEEMSDTRG 1360 Query: 241 ATEWCAEYDEWGNLLNE--------------------ENPHQ----LQQLIRLPGQQYDE 276 W A Y WG + E + P Q + Q +R+ GQ D Sbjct: 1361 NLVWQARYLTWGATVQEHWQAFDATGRPADAPLAETCDRPQQSFAPMPQNLRMQGQYLDR 1420 Query: 277 ESGLYYNRHRYYDPLQGRYITQDPIGLKGGWNFYQYPLNPVQYIDSMG 324 E+GL+YN RYYDP G + T DPIGL GG N +QY NP+ +ID G Sbjct: 1421 ETGLHYNTFRYYDPDLGAFTTPDPIGLAGGINLHQYAPNPIAWIDPWG 1468 >UniRef50_B0VRR7 Putative uncharacterized protein n=1 Tax=Acinetobacter baumannii SDF RepID=B0VRR7_ACIBS Length = 296 Score = 107 bits (266), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 50/115 (43%), Positives = 68/115 (59%), Gaps = 7/115 (6%) Query: 221 IHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNE-------ENPHQLQQLIRLPGQQ 273 + YHCDH G P + GA W AEY WG E EN + IR GQ Sbjct: 43 VWFYHCDHLGTPQEMTDHTGAIIWKAEYKAWGECKAEKAKSNFFENSEIISNNIRFQGQY 102 Query: 274 YDEESGLYYNRHRYYDPLQGRYITQDPIGLKGGWNFYQYPLNPVQYIDSMGLASK 328 +DEE+GL+YNR+RYY P GR++++DPIGL GG N Y Y +P +++D +GL+ + Sbjct: 103 FDEETGLHYNRYRYYSPYVGRFVSKDPIGLLGGSNNYAYAPSPTEWVDPLGLSCQ 157 >UniRef50_Q39K64 Rhs family protein n=22 Tax=Burkholderia RepID=Q39K64_BURS3 Length = 1560 Score = 107 bits (266), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 51/113 (45%), Positives = 67/113 (59%), Gaps = 6/113 (5%) Query: 224 YHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNE-ENPHQLQQLI-----RLPGQQYDEE 277 YHCD G P L EG W A Y WG ++ ++ R GQQ D+E Sbjct: 1321 YHCDQIGTPQLLTDDEGDVVWEASYKAWGEAREVIARASKVAGIVPRSSLRFQGQQVDDE 1380 Query: 278 SGLYYNRHRYYDPLQGRYITQDPIGLKGGWNFYQYPLNPVQYIDSMGLASKYG 330 +GL+YNRHRYYDP GR++++DPIGL GG N YQY NPV+++D +GL+ G Sbjct: 1381 TGLHYNRHRYYDPRSGRFVSKDPIGLAGGINVYQYAPNPVKWVDPLGLSKSEG 1433 Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 34/111 (30%), Positives = 54/111 (48%), Gaps = 16/111 (14%) Query: 44 RYHYDSQHRLVHYTRTQYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVT 103 RY +++ +R+ T + A ESRY YD LGRR+AK V + T Sbjct: 1203 RYEWNAFNRMTAATVDEVARR-SESRYYYDALGRRIAKEV---------------NGERT 1246 Query: 104 WYGWDGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLAD 154 +GWDGD L ++ +Y+ GSF P+++ +A+ + +T R D Sbjct: 1247 VFGWDGDTLAYESGEQGSTHYLYEAGSFVPMVQYASASVDGFETPSRRETD 1297 >UniRef50_Q4ZLF3 YD repeat n=5 Tax=Pseudomonas syringae group RepID=Q4ZLF3_PSEU2 Length = 451 Score = 106 bits (265), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 59/151 (39%), Positives = 84/151 (55%), Gaps = 8/151 (5%) Query: 220 KIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEESG 279 K++ +H D G PL + EG W A+Y WG + + ++++Q +R GQ +D E+G Sbjct: 209 KVYYFHTDQIGTPLEMTDAEGQIVWQAKYRAWG-AVEKLVVNEVEQNLRFQGQYFDAETG 267 Query: 280 LYYNRHRYYDPLQGRYITQDPIGLKGGWNFYQYPLNPVQYIDSMGLASKYGHLNNGG--Y 337 L+YN RYYDP GR+ITQDPIGL GG+N Y Y NP +ID +GL Y N G Y Sbjct: 268 LHYNTFRYYDPEIGRFITQDPIGLLGGFNLYGYCRNPTAWIDPLGLDWNYFLSNEDGAYY 327 Query: 338 GARPNKPPTPDPSKLPDIAKQLRLPYPIDQA 368 R + D + L D+ ++ +D A Sbjct: 328 HGRAS-----DKTSLSDVMRRHGKNKGVDGA 353 Score = 59.7 bits (143), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 46/141 (32%), Positives = 68/141 (48%), Gaps = 20/141 (14%) Query: 4 DNRIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAE 63 DNR+ + A++ Y+YD G L EKT G++R + YD ++RLV + Sbjct: 86 DNRLKQWANHEYKYDAWGNLIEKT----VGIVRW-----QTFTYDCENRLVKTETMADTQ 136 Query: 64 PLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQ 123 S Y YD LGRRVAK + ++ G R + W G R+ ++ Sbjct: 137 VESTSSYQYDSLGRRVAK-----QSEIKGQTDHKR------FLWQGLRMLREESPGQSSL 185 Query: 124 TIYQPGSFTPLIRVETATGEL 144 IY+PGS+ PL RV+ GE+ Sbjct: 186 YIYEPGSYAPLARVDEKEGEV 206 >UniRef50_A1U3R9 YD repeat protein n=3 Tax=Gammaproteobacteria RepID=A1U3R9_MARAV Length = 1611 Score = 103 bits (258), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 49/109 (44%), Positives = 71/109 (65%), Gaps = 1/109 (0%) Query: 220 KIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEESG 279 +++ YH DH G P L + +G W Y +GN++ ++ ++ +R GQ +D E+G Sbjct: 1353 EVYYYHLDHLGTPQELTNQQGRLVWSVTYRAYGNVVQQQVA-EIDNPLRFQGQYHDPETG 1411 Query: 280 LYYNRHRYYDPLQGRYITQDPIGLKGGWNFYQYPLNPVQYIDSMGLASK 328 L+YNRHRYY+P GR+IT DPIGL GG N YQY NP ++D +GLAS+ Sbjct: 1412 LHYNRHRYYNPNTGRFITPDPIGLAGGLNNYQYVPNPTGWVDPLGLASR 1460 Score = 42.4 bits (98), Expect = 0.043, Method: Compositional matrix adjust. Identities = 39/134 (29%), Positives = 53/134 (39%), Gaps = 26/134 (19%) Query: 5 NRIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEP 64 NR+ Y YD G L E+ + ++ RY YD +HRL T + Sbjct: 1238 NRLTMHGDSHYEYDEFGNLIEERRGKGQKLVT-------RYTYDCEHRLTSVTTPDGST- 1289 Query: 65 LVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQT 124 Y YD GRR+AK L+R T + W GDRL + Sbjct: 1290 ---WHYEYDAFGRRIAKT-----------NGLTR----TEFLWQGDRLIAEETGDQYRTY 1331 Query: 125 IYQPGSFTPLIRVE 138 +Y+P SF PL V+ Sbjct: 1332 LYEPDSFKPLALVD 1345 >UniRef50_A1TR18 YD repeat protein n=8 Tax=Acidovorax RepID=A1TR18_ACIAC Length = 1654 Score = 103 bits (258), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 89/333 (26%), Positives = 134/333 (40%), Gaps = 59/333 (17%) Query: 15 YRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESR----Y 70 + YD RL EK R R+ +D + +LV T++ +R + Sbjct: 1222 FAYDGFARLREK---------RIGRHTVQRFEWDDEDQLVAVETTRHPGTAQATRQRVEF 1272 Query: 71 LYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQPGS 130 YD LGRR+AK+ D G T + W+G RL + + +Y+PGS Sbjct: 1273 RYDALGRRIAKQ------DAFG---------RTEFIWEGMRLIEERRGSKVVSYVYEPGS 1317 Query: 131 FTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVS 190 + PL R++ A G+ + S + P L+ + + + Sbjct: 1318 YVPLARID-ADGQRLEGSGHGGLVGGAGSDAAGRATSANPGTGYASLNPMAAPGSSAAGQ 1376 Query: 191 EESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDE 250 S Q + + ++ +H D GLP + G W A + Sbjct: 1377 AAS-----------ASAQTPAESRLRASAQVSYFHNDPSGLPEEVTDEAGEVRWRASWRT 1425 Query: 251 WGNLLNEE-------------------NPHQLQQLIRLPGQQYDEESGLYYNRHRYYDPL 291 WG+ L E N L+Q +RL GQ D E+GL+YN RYYDP Sbjct: 1426 WGSALEERWEAVRIDGSAIPAVQQRHRNEDTLEQNLRLQGQYLDRETGLHYNTFRYYDPD 1485 Query: 292 QGRYITQDPIGLKGGWNFYQYPLNPVQYIDSMG 324 GR+I+ DPIGL GG N +Y NP+ +ID +G Sbjct: 1486 VGRFISPDPIGLAGGLNLQRYAANPISWIDPLG 1518 >UniRef50_B1J8X0 YD repeat protein n=50 Tax=Gammaproteobacteria RepID=B1J8X0_PSEPW Length = 1411 Score = 102 bits (255), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 57/154 (37%), Positives = 85/154 (55%), Gaps = 3/154 (1%) Query: 210 QMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRL 269 ++D +KI+ +H D G PL L +EG W A Y WG + + +++ Q +R Sbjct: 1162 RVDQAEGDEQKIYYFHTDQIGTPLELTDSEGKIVWQATYRSWG-AIEQLTVNEIDQNLRF 1220 Query: 270 PGQQYDEESGLYYNRHRYYDPLQGRYITQDPIGLKGGWNFYQYPLNPVQYIDSMGLA-SK 328 GQ +D E+ L+YN RYYDP GR+I DPIGL+GG N ++Y +NP+ +ID GLA + Sbjct: 1221 QGQYFDRETSLHYNTLRYYDPDVGRFIGPDPIGLRGGVNLFRYNVNPIYWIDPTGLAPCQ 1280 Query: 329 YGHLNNGGYGARPNKPPTPDPSKLPD-IAKQLRL 361 +NN R TP + + IA +L + Sbjct: 1281 VRVVNNTKIHGRGQVDGTPGHDQFSEAIANKLAM 1314 Score = 58.2 bits (139), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 49/149 (32%), Positives = 67/149 (44%), Gaps = 32/149 (21%) Query: 4 DNRIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAE 63 DNRI R YRYD G L EK R+ + + YD ++RLV AE Sbjct: 1050 DNRIKRWRDQEYRYDPWGNLIEK---------RSGHSKLQSFSYDCENRLVR------AE 1094 Query: 64 PLVESR------YLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQN 117 LV + Y YD LGRR+AK + ++ G R + W G R+ + Sbjct: 1095 TLVNGKLESTGAYRYDSLGRRIAK-----QSEINGTTEQKR------FLWQGLRMLREET 1143 Query: 118 DRTRIQTIYQPGSFTPLIRVETATGELAK 146 I +Y+PGS+ PL RV+ A G+ K Sbjct: 1144 PGQSILYLYEPGSYAPLARVDQAEGDEQK 1172 >UniRef50_B2VH58 Rhs family protein n=5 Tax=Enterobacteriaceae RepID=B2VH58_ERWT9 Length = 1322 Score = 102 bits (254), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 62/156 (39%), Positives = 83/156 (53%), Gaps = 13/156 (8%) Query: 178 DRLESEILADRVSEESRRWL--ASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLAL 235 DRL SEI R S W+ S + + Q+ A +IH YH D G+P L Sbjct: 1054 DRLLSEIRGAR----SHTWVYEDSGFVPLAQISATQGDTEEQA-EIHWYHTDQAGMPREL 1108 Query: 236 VSTEGATEWCAEYDEWGN------LLNEENPHQLQQLIRLPGQQYDEESGLYYNRHRYYD 289 + G W A+Y WGN E + + Q +R GQ +D E+GL+YNR RYYD Sbjct: 1109 SNRSGDICWQADYRVWGNTRQVSYAQQEADAETIHQPLRYQGQYFDGETGLHYNRFRYYD 1168 Query: 290 PLQGRYITQDPIGLKGGWNFYQYPLNPVQYIDSMGL 325 P GR+I++DP+GL GG N YQY NP ++D +GL Sbjct: 1169 PDIGRFISRDPVGLSGGMNLYQYAPNPYGWVDPLGL 1204 Score = 41.6 bits (96), Expect = 0.070, Method: Compositional matrix adjust. Identities = 39/143 (27%), Positives = 62/143 (43%), Gaps = 31/143 (21%) Query: 4 DNRIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRL--VHYTRTQY 61 DNR+ + YD HG +TEK R R+ ++++H+L H R Sbjct: 973 DNRMRVYEDKRWEYDAHGNVTEK---------RIGRHTRQRFIWNAEHQLEEAHGERRGV 1023 Query: 62 AEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDR-LTTIQNDRT 120 + + Y YD GR R W+++ K VT + WDGDR L+ I+ R+ Sbjct: 1024 EQS---TTYGYDAFGR----RSWKKD-----------KFGVTHFVWDGDRLLSEIRGARS 1065 Query: 121 RIQTIYQPGSFTPLIRVETATGE 143 +Y+ F PL ++ G+ Sbjct: 1066 HTW-VYEDSGFVPLAQISATQGD 1087 >UniRef50_A6V8C8 Putative uncharacterized protein n=7 Tax=Pseudomonas aeruginosa RepID=A6V8C8_PSEA7 Length = 1319 Score = 102 bits (253), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 113/332 (34%), Positives = 137/332 (41%), Gaps = 83/332 (25%) Query: 2 WPDNRIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQY 61 W NR+ R A Y +D G L E+ + D ER R YD RLV TR Sbjct: 914 WLGNRVQRIAGNRYHFDAQGNLVER--------VGADGERL-RLAYDGAQRLVRLTREAA 964 Query: 62 AEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTR 121 VE+RY YD L RR+AK V R Q +GWDGDR Sbjct: 965 DGTRVEARYRYDALSRRIAKSVLR-----------DGVEQQVRFGWDGDR---------- 1003 Query: 122 IQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLE 181 + A+ R L T+ + GG F P+L RLE Sbjct: 1004 ---------------------QCAEAFERQLRTTVHEPGG-------FVPLL-----RLE 1030 Query: 182 S-------EILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLA 234 E+L E RR A+ G + + Q P AR +H DH G PL Sbjct: 1031 QAREPDTPELL------ELRRTFAAEG---QPLPAQCVPELGEAR-FAFFHTDHLGTPLQ 1080 Query: 235 LVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEESGLYYNRHRYYDPLQGR 294 L G W +W + + P Q IR GQ +DEESGLYYNR+RYY P GR Sbjct: 1081 LSDERGQLRWQGVAHDWRAVEPDREPG--AQPIRFQGQYHDEESGLYYNRYRYYLPEAGR 1138 Query: 295 YITQDPIGLKGGWNFYQYPLN-PVQYIDSMGL 325 Y +QDP+GL GG N Y Y LN P D GL Sbjct: 1139 YASQDPLGLGGGPNPYTYALNAPSVAYDPTGL 1170 >UniRef50_Q13ML3 YD repeat protein n=10 Tax=Proteobacteria RepID=Q13ML3_BURXL Length = 1531 Score = 101 bits (252), Expect = 5e-20, Method: Compositional matrix adjust. Identities = 52/109 (47%), Positives = 66/109 (60%), Gaps = 2/109 (1%) Query: 220 KIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENP--HQLQQLIRLPGQQYDEE 277 I+ YH D G P L S +G W A Y WGN + E P + ++Q +R GQ D E Sbjct: 1297 SIYYYHTDINGAPEELTSADGRIVWQAMYQLWGNTVRESEPESYAVRQNLRYQGQYLDRE 1356 Query: 278 SGLYYNRHRYYDPLQGRYITQDPIGLKGGWNFYQYPLNPVQYIDSMGLA 326 +GL+YN RYYDP GR+ T DPIGL GG N Y+Y NP+ +ID MGL+ Sbjct: 1357 TGLHYNTLRYYDPDIGRFTTPDPIGLAGGVNLYRYAPNPMSWIDPMGLS 1405 Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 44/141 (31%), Positives = 62/141 (43%), Gaps = 23/141 (16%) Query: 5 NRIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEP 64 NR+ R Y YD HGR + L G+ RY YD++HRLV + Q P Sbjct: 1173 NRVLRFRDRRYEYDAHGRTASR--LTAAGL--------QRYRYDAEHRLVEVSIEQTGGP 1222 Query: 65 LVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKP-QVTWYGWDGDRLT-TIQNDRTRI 122 + Y YD +GRRVAK M +P T + WDG R+ ++ D Sbjct: 1223 VRRYGYAYDAVGRRVAKFA----------MDGDGQPFGRTRFLWDGMRMVQEVRADGADS 1272 Query: 123 QTIYQ-PGSFTPLIRVETATG 142 +Y GS+ P+ R++ G Sbjct: 1273 LYLYNGEGSYEPVARIDGRNG 1293 >UniRef50_B9B9U8 YD repeat protein n=1 Tax=Burkholderia multivorans CGD1 RepID=B9B9U8_9BURK Length = 345 Score = 101 bits (252), Expect = 6e-20, Method: Compositional matrix adjust. Identities = 50/114 (43%), Positives = 63/114 (55%), Gaps = 6/114 (5%) Query: 220 KIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNL------LNEENPHQLQQLIRLPGQQ 273 K+ YHCD G P L +G W A Y WG ++ + +R GQQ Sbjct: 170 KLFYYHCDQIGTPQLLTDDDGDVVWEASYKAWGEAREVIARASKAAGIVARNSLRFQGQQ 229 Query: 274 YDEESGLYYNRHRYYDPLQGRYITQDPIGLKGGWNFYQYPLNPVQYIDSMGLAS 327 DEE+GL+YNR+RYYDP GR+ + DPI L GG N YQY LN V +ID G +S Sbjct: 230 EDEETGLHYNRYRYYDPTSGRFTSADPIRLAGGSNVYQYALNLVSWIDPFGFSS 283 >UniRef50_Q7MDR0 Rhs family protein n=3 Tax=Vibrio vulnificus RepID=Q7MDR0_VIBVY Length = 1498 Score = 100 bits (248), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 52/111 (46%), Positives = 66/111 (59%), Gaps = 2/111 (1%) Query: 220 KIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEESG 279 + + Y CD G PLALV +G+ W A YD +G E + +R GQ +D E+G Sbjct: 1026 QCYFYQCDQIGTPLALVDEQGSVVWQARYDTYGRAHIE--VESVGNPLRFQGQYHDVETG 1083 Query: 280 LYYNRHRYYDPLQGRYITQDPIGLKGGWNFYQYPLNPVQYIDSMGLASKYG 330 L+YN RYYDP GR+I DPIGL GG N YQY NPV ++D GL +K G Sbjct: 1084 LHYNLARYYDPRTGRFIQPDPIGLLGGINHYQYAPNPVMWVDPHGLCAKEG 1134 >UniRef50_Q48LL6 Rhs family protein n=1 Tax=Pseudomonas syringae pv. phaseolicola 1448A RepID=Q48LL6_PSE14 Length = 362 Score = 99.8 bits (247), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 48/107 (44%), Positives = 67/107 (62%), Gaps = 1/107 (0%) Query: 220 KIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEESG 279 K++ +H D G PL + EG W A+Y WG + + ++++Q +R GQ +D E+G Sbjct: 125 KVYYFHTDQIGTPLEMTDAEGQIVWQAKYRAWG-AVEKLVVNEVEQNLRFQGQYFDVETG 183 Query: 280 LYYNRHRYYDPLQGRYITQDPIGLKGGWNFYQYPLNPVQYIDSMGLA 326 L+YN RYYDP GR+ITQDPIGL GG N Y+Y NP ++D G A Sbjct: 184 LHYNTFRYYDPEIGRFITQDPIGLDGGDNLYKYVPNPTAWVDPWGWA 230 >UniRef50_C0Q6Q9 Rhs-family protein n=27 Tax=Enterobacteriaceae RepID=C0Q6Q9_SALPC Length = 1593 Score = 99.8 bits (247), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 47/108 (43%), Positives = 65/108 (60%) Query: 218 ARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEE 277 A ++ YH D G P + G W A Y WGNL +E+ +QQ +R GQ D E Sbjct: 1338 ADEVLYYHTDVNGAPEEMTDGGGNIVWEAGYQVWGNLTHEKETRPVQQNLRFQGQYLDRE 1397 Query: 278 SGLYYNRHRYYDPLQGRYITQDPIGLKGGWNFYQYPLNPVQYIDSMGL 325 +GL+YN +R+YDP G++I+ DPI L+GG N Y Y NP+ +ID +GL Sbjct: 1398 TGLHYNLYRFYDPDIGKFISGDPISLRGGINLYAYAPNPISWIDPLGL 1445 Score = 41.2 bits (95), Expect = 0.078, Method: Compositional matrix adjust. Identities = 47/142 (33%), Positives = 59/142 (41%), Gaps = 24/142 (16%) Query: 3 PDNRIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYA 62 P NRI YRYD +GR+ EK T Y +D++HRL + Sbjct: 1214 PFNRITSYRGLHYRYDEYGRVVEKWGR----------NGTQHYRWDAEHRLTEVAVIR-G 1262 Query: 63 EPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKP-QVTWYGWDGDRLT-TIQNDRT 120 + Y+YD GRRV K E D G KP T + WDG RL + R+ Sbjct: 1263 STVRRYGYVYDAPGRRVEK----HELDAEG------KPYNRTTFLWDGMRLAQECRLGRS 1312 Query: 121 RIQTIYQ-PGSFTPLIRVETAT 141 IY GS PL RV+ A Sbjct: 1313 SSLYIYSDQGSHEPLARVDRAA 1334 >UniRef50_C5AIF2 Rhs family protein n=1 Tax=Burkholderia glumae BGR1 RepID=C5AIF2_BURGB Length = 345 Score = 99.0 bits (245), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 49/121 (40%), Positives = 66/121 (54%), Gaps = 7/121 (5%) Query: 223 LYHCDHRGLPLALVSTEGATEWCAEYDEWGN---LLNEENPHQLQQLIRLP----GQQYD 275 YHCD G PL + G W A Y WG ++ + ++R P GQQ+D Sbjct: 109 FYHCDQIGTPLMMTDEAGELVWEASYRAWGEAQEVIERASAAAGIDVVRNPLRFQGQQFD 168 Query: 276 EESGLYYNRHRYYDPLQGRYITQDPIGLKGGWNFYQYPLNPVQYIDSMGLASKYGHLNNG 335 +E+G +YNR+RYYDP R++ +DPIGL GG N YQY NP+ +ID +GL G Sbjct: 169 DETGQHYNRYRYYDPGSSRFVNKDPIGLTGGINIYQYAPNPISWIDPLGLQRTLTGTTKG 228 Query: 336 G 336 G Sbjct: 229 G 229 >UniRef50_UPI0001BC4026 Rhs family protein n=6 Tax=Neisseria RepID=UPI0001BC4026 Length = 1477 Score = 98.2 bits (243), Expect = 6e-19, Method: Compositional matrix adjust. Identities = 48/123 (39%), Positives = 67/123 (54%), Gaps = 1/123 (0%) Query: 204 VEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEEN-PHQ 262 + Q+ N + + I+ +HCD G+P + +G W +YD WG L+ E N Sbjct: 1128 LAQIHNYTNEEGETHQDINYFHCDQIGIPREMTDEDGKLLWFGKYDVWGKLVKETNITGS 1187 Query: 263 LQQLIRLPGQQYDEESGLYYNRHRYYDPLQGRYITQDPIGLKGGWNFYQYPLNPVQYIDS 322 Q RL Q +D E+GL+YN RYYDP GR++ QDPIGL GG N Y + N + D Sbjct: 1188 AHQPFRLQNQYFDRETGLHYNFFRYYDPDIGRFVNQDPIGLDGGENLYGFAPNAAVWSDP 1247 Query: 323 MGL 325 +GL Sbjct: 1248 LGL 1250 >UniRef50_Q6LUC6 Hypothetical nucleotidyltransferase n=1 Tax=Photobacterium profundum RepID=Q6LUC6_PHOPR Length = 1352 Score = 98.2 bits (243), Expect = 6e-19, Method: Compositional matrix adjust. Identities = 48/108 (44%), Positives = 67/108 (62%), Gaps = 2/108 (1%) Query: 221 IHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEESGL 280 ++ YH DH G P + +EG W A Y+ G + + +R GQ +D+ESGL Sbjct: 1057 LYFYHTDHIGTPHTVTDSEGEVVWQATYNALGCAAISIDI--IHNPLRFQGQYHDQESGL 1114 Query: 281 YYNRHRYYDPLQGRYITQDPIGLKGGWNFYQYPLNPVQYIDSMGLASK 328 +YNR RYYDP G++I QDPIGL GG N Y+Y NP+Q++D +GL+ K Sbjct: 1115 HYNRFRYYDPSIGQFIHQDPIGLLGGINHYRYAPNPIQWVDPLGLSCK 1162 >UniRef50_Q6LUC4 Putative uncharacterized protein n=1 Tax=Photobacterium profundum RepID=Q6LUC4_PHOPR Length = 532 Score = 98.2 bits (243), Expect = 7e-19, Method: Compositional matrix adjust. Identities = 48/110 (43%), Positives = 68/110 (61%), Gaps = 2/110 (1%) Query: 221 IHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEESGL 280 + YH DH G P + +++G W A Y+ G + + +R GQ +D+ESGL Sbjct: 259 FYYYHTDHLGTPHTVTNSDGEVVWQATYNALGCAFISIDI--IHNPLRFQGQYHDQESGL 316 Query: 281 YYNRHRYYDPLQGRYITQDPIGLKGGWNFYQYPLNPVQYIDSMGLASKYG 330 +YNR RYYDP G++I QDPIGL GG N Y+Y NP+Q++D +GL+ K G Sbjct: 317 HYNRFRYYDPSIGQFIHQDPIGLLGGINHYRYAPNPIQWVDPLGLSCKEG 366 >UniRef50_Q4K3M9 Rhs family protein n=5 Tax=Pseudomonas RepID=Q4K3M9_PSEF5 Length = 1486 Score = 97.8 bits (242), Expect = 7e-19, Method: Compositional matrix adjust. Identities = 51/112 (45%), Positives = 67/112 (59%), Gaps = 2/112 (1%) Query: 219 RKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNE-ENPHQLQ-QLIRLPGQQYDE 276 +KI YH D GLP L +G + W A Y WGN + E P+ ++ Q +R GQ D Sbjct: 1242 QKIRYYHNDLNGLPQQLCEPDGHSVWQARYQVWGNTVEEIREPYYIEEQNLRFQGQYLDR 1301 Query: 277 ESGLYYNRHRYYDPLQGRYITQDPIGLKGGWNFYQYPLNPVQYIDSMGLASK 328 E+GL++N R+YDP GR+ T DPIGL GG N YQY NP+ +ID +G K Sbjct: 1302 ETGLHFNTFRFYDPDIGRFTTPDPIGLAGGLNLYQYAPNPIGWIDPLGWICK 1353 Score = 56.2 bits (134), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 41/125 (32%), Positives = 59/125 (47%), Gaps = 21/125 (16%) Query: 15 YRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHY-TRTQYAEPLVESRYLYD 73 YRYD GR+ EK R+ R+ YD++HRL+ +T E LV RY D Sbjct: 1132 YRYDAFGRMIEK---------RSGRRGVQRFAYDAEHRLIEVRNQTSSGETLVRMRY--D 1180 Query: 74 PLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQPGSFTP 133 LGRR++K + + +L G T + WDG RL Q ++ +Y+ P Sbjct: 1181 VLGRRISKSEYDSQGNLLG---------ETRFVWDGLRLLQEQRNQQTSLYVYEDLGHAP 1231 Query: 134 LIRVE 138 L RV+ Sbjct: 1232 LARVD 1236 >UniRef50_A7FDJ9 RHS/YD repeat protein n=30 Tax=Enterobacteriaceae RepID=A7FDJ9_YERP3 Length = 1418 Score = 97.8 bits (242), Expect = 9e-19, Method: Compositional matrix adjust. Identities = 49/112 (43%), Positives = 66/112 (58%), Gaps = 7/112 (6%) Query: 220 KIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLL--NEENPHQ-----LQQLIRLPGQ 272 +++ +H D G PL + EG W +Y WG + N +P Q Q +R PGQ Sbjct: 1179 QVYYFHTDINGTPLDVTDGEGKHRWSGKYHAWGKVTRQNVSDPRQSTVSRFAQPLRYPGQ 1238 Query: 273 QYDEESGLYYNRHRYYDPLQGRYITQDPIGLKGGWNFYQYPLNPVQYIDSMG 324 D+E+GL+YN RYYDP GR+ TQDPIGL GG N YQY NP+ ++D +G Sbjct: 1239 YSDDETGLHYNTFRYYDPEIGRFSTQDPIGLAGGINLYQYGPNPLGWVDPLG 1290 Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust. Identities = 45/144 (31%), Positives = 61/144 (42%), Gaps = 23/144 (15%) Query: 3 PDNRIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYA 62 +NR+ + HY + YD G +T R R + YD +RL+ R Sbjct: 1052 ANNRLTQWQHYRFEYDAWGNMT----------TRHAGGRMQHFAYDDDNRLL---RAWGT 1098 Query: 63 EPLVE--SRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRT 120 PL E S Y YD LGRR+ K V + + + T + W G RL Q+ Sbjct: 1099 GPLGEHDSHYRYDALGRRIHKSVTIKR-------GAEKTTRQTDFIWQGLRLLQEQHADG 1151 Query: 121 RIQTIYQPG-SFTPLIRVETATGE 143 IY P S+TPL RV+ GE Sbjct: 1152 NATYIYDPNESYTPLARVDQRHGE 1175 >UniRef50_Q12LF3 YD repeat n=2 Tax=Shewanella denitrificans OS217 RepID=Q12LF3_SHEDO Length = 927 Score = 97.8 bits (242), Expect = 9e-19, Method: Compositional matrix adjust. Identities = 56/120 (46%), Positives = 67/120 (55%), Gaps = 5/120 (4%) Query: 221 IHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEESGL 280 ++ H DH G P AL + G +W A Y +G + + +++Q IR PGQ YDEESGL Sbjct: 681 VYYVHTDHLGTPTALTDSTGTVQWQAHYTPFGQTI--VDIDKIKQAIRFPGQYYDEESGL 738 Query: 281 YYNRHRYYDPLQGRYITQDPIGLKGGWNFYQYPL-NPVQYIDSMGL--ASKYGHLNNGGY 337 +YN R YDP GRYI DPIGL GG N Y Y NPV D GL G L N GY Sbjct: 739 HYNYFRDYDPELGRYIQSDPIGLAGGINTYGYAYQNPVMNTDPTGLWVPQAIGALVNMGY 798 >UniRef50_A6GLW0 Rhs family protein n=1 Tax=Limnobacter sp. MED105 RepID=A6GLW0_9BURK Length = 1598 Score = 97.4 bits (241), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 50/114 (43%), Positives = 68/114 (59%), Gaps = 11/114 (9%) Query: 220 KIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLL----NE-ENPHQLQQLIRLPGQQY 274 ++ YH DH G P + + W + + +G L+ NE ENP +R GQ + Sbjct: 1356 EVFHYHTDHIGTPREITNASAEVVWSSTFKTYGALVLAHVNEVENP------LRFQGQYF 1409 Query: 275 DEESGLYYNRHRYYDPLQGRYITQDPIGLKGGWNFYQYPLNPVQYIDSMGLASK 328 D E+GL+YNRHRYYDP G++ TQDPIGL GG N YQY NP+ ++D GL+ K Sbjct: 1410 DSETGLHYNRHRYYDPNCGQFTTQDPIGLLGGMNTYQYAPNPMTWVDPWGLSCK 1463 Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust. Identities = 40/145 (27%), Positives = 62/145 (42%), Gaps = 32/145 (22%) Query: 3 PDNRIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYA 62 P NR+ R + + YD G E ++I G + + RY +++Q++LV Sbjct: 1236 PGNRLKRQGNRRFNYDERGNRIE--EIIERGARQG---QVTRYSHNAQNQLVEVNVAG-- 1288 Query: 63 EPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQN----- 117 V +RY YD LGRR++K S + T + W+GD L N Sbjct: 1289 ---VVTRYTYDALGRRISK---------------SSEHGNTIFYWNGDVLLGEINSGFDH 1330 Query: 118 --DRTRIQTIYQPGSFTPLIRVETA 140 +R +++P SF PL VE Sbjct: 1331 EQNRPSRTYLFEPFSFKPLALVENG 1355 >UniRef50_D0KES6 YD repeat protein n=15 Tax=Gammaproteobacteria RepID=D0KES6_PECWW Length = 1379 Score = 97.1 bits (240), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 57/158 (36%), Positives = 76/158 (48%), Gaps = 12/158 (7%) Query: 216 TPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNL---------LNEENPHQLQQL 266 P I ++ + G PL + EGA W +Y +G + L P + Q L Sbjct: 1158 APDGDIRWFNTELNGAPLEMTDAEGAVRWSGDYGSFGAINGQTQDSEGLRHGKPVESQSL 1217 Query: 267 IRLPGQQYDEESGLYYNRHRYYDPLQGRYITQDPIGLKGGWNFYQYPLNPVQYIDSMGLA 326 R GQ DEE+GL+YN RYYDP GR+ TQDPIGL GG N Y Y NP+ ++D +GLA Sbjct: 1218 -RYAGQYADEETGLHYNLFRYYDPTVGRFTTQDPIGLAGGLNLYAYAPNPLGWVDPLGLA 1276 Query: 327 SKY--GHLNNGGYGARPNKPPTPDPSKLPDIAKQLRLP 362 G + G G N P P ++ + P Sbjct: 1277 KILTDGVVYRMGSGTDSNLTPRPGKDTTTGLSTTIEKP 1314 >UniRef50_UPI0001C34A7C Rhs family protein n=1 Tax=Neisseria subflava NJ9703 RepID=UPI0001C34A7C Length = 335 Score = 97.1 bits (240), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 48/126 (38%), Positives = 68/126 (53%), Gaps = 1/126 (0%) Query: 204 VEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEEN-PHQ 262 + Q+ N + ++ H +HCD G+P + +G W Y WG L +E N Sbjct: 62 LAQVHNWTNEEGESRQQTHYFHCDQIGIPREMTDEDGNLLWFGNYTGWGKLKSETNISGT 121 Query: 263 LQQLIRLPGQQYDEESGLYYNRHRYYDPLQGRYITQDPIGLKGGWNFYQYPLNPVQYIDS 322 Q RL Q D E+GL+YN RYY+P GR++ QDPIGL GG NFY + N +++D Sbjct: 122 AHQPFRLQNQYCDRETGLHYNFFRYYEPDAGRFVNQDPIGLFGGSNFYMFAFNISRWLDP 181 Query: 323 MGLASK 328 +GL K Sbjct: 182 LGLKGK 187 >UniRef50_Q1I7Q5 Putative uncharacterized protein n=11 Tax=Pseudomonas RepID=Q1I7Q5_PSEE4 Length = 1595 Score = 96.7 bits (239), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 53/119 (44%), Positives = 62/119 (52%), Gaps = 17/119 (14%) Query: 220 KIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLL----------NEENPHQLQQLIRL 269 I Y CDH G P+ L EG W A Y WG+L N NP IR Sbjct: 1325 SIFWYQCDHLGTPMELTDEEGHVVWAAHYKAWGDLAELPGSSVAMSNARNP------IRF 1378 Query: 270 PGQQYDEESGLYYNRHRYYDPLQGRYITQDPIGLKGGWNFYQYP-LNPVQYIDSMGLAS 327 GQ D+E+GL+YNR RYYDP RY+++DPIG GG N Y Y +PV D MGL S Sbjct: 1379 QGQYQDQETGLHYNRFRYYDPKSARYVSKDPIGFMGGANAYTYTGGSPVTATDPMGLKS 1437 Score = 43.1 bits (100), Expect = 0.024, Method: Compositional matrix adjust. Identities = 40/152 (26%), Positives = 64/152 (42%), Gaps = 33/152 (21%) Query: 4 DNRIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAE 63 DNR+ + ++YD G L + R + + +D RL HY + Sbjct: 1151 DNRLRQFDGTHFKYDERGNL----------IHRLREGKHAHLAWDLFDRLAHYN-----D 1195 Query: 64 PLVESRYLYDPLGRRVAKRV----WRRERDLTGWMSLSR-------KPQVTWYGWDGDRL 112 ++ Y YD LGRR+ K W + TGW + R K T +GWDG+ L Sbjct: 1196 DRLKVEYSYDALGRRLHKHSVAHYWDKPDAGTGWNQMQRAKRQRELKCGFTLFGWDGNAL 1255 Query: 113 ----TTIQND---RTRIQTIYQPGSFTPLIRV 137 + ++D + + +Y PGSF P+ + Sbjct: 1256 AWESSPARDDGDTGSTVHYLYLPGSFVPVAQA 1287 >UniRef50_A7K3Q8 Rhs family protein n=7 Tax=Vibrio RepID=A7K3Q8_VIBSE Length = 1384 Score = 96.7 bits (239), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 47/110 (42%), Positives = 63/110 (57%), Gaps = 2/110 (1%) Query: 221 IHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEESGL 280 I+ Y CD G P L+ EG W A YD G + ++ +R GQ +D+E+ L Sbjct: 1029 IYWYQCDQVGKPERLIDCEGNVVWSASYDAHG--FAHVHIEKVVNPLRFQGQYFDQETNL 1086 Query: 281 YYNRHRYYDPLQGRYITQDPIGLKGGWNFYQYPLNPVQYIDSMGLASKYG 330 +YN RYYDP GR+I QDPI + GG N YQY +NP+Q+ID G + G Sbjct: 1087 HYNLARYYDPKLGRFIQQDPISIAGGINHYQYAINPIQWIDPTGFLCEEG 1136 >UniRef50_D0KES8 RHS protein n=3 Tax=Pectobacterium wasabiae WPP163 RepID=D0KES8_PECWW Length = 307 Score = 96.3 bits (238), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 50/123 (40%), Positives = 65/123 (52%), Gaps = 8/123 (6%) Query: 216 TPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNE--------ENPHQLQQLI 267 P I ++ + G PL + EGA W +Y +G + + Q + Sbjct: 69 APDGDIRWFNTELDGAPLEMTDAEGAVRWSGDYGSFGAVNGQTQDSEGLRHGKQAESQSL 128 Query: 268 RLPGQQYDEESGLYYNRHRYYDPLQGRYITQDPIGLKGGWNFYQYPLNPVQYIDSMGLAS 327 R GQ DEE+GL+YN RYYDP GR+ TQDPIGL GG N YQY NP+ +ID +GLA Sbjct: 129 RYAGQYADEETGLHYNLFRYYDPTVGRFTTQDPIGLAGGINLYQYAPNPLTWIDPLGLAC 188 Query: 328 KYG 330 G Sbjct: 189 TKG 191 >UniRef50_Q87U70 Rhs family protein n=2 Tax=Pseudomonas RepID=Q87U70_PSESM Length = 1572 Score = 95.5 bits (236), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 55/142 (38%), Positives = 78/142 (54%), Gaps = 11/142 (7%) Query: 224 YHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEESGLYYN 283 Y DH G P L G W A+Y +GNL + +++ +R GQ +D E+GL+YN Sbjct: 1311 YQLDHLGTPQELTDYSGEIMWSAKYRAYGNLATLDIA-EIENPLRFQGQYFDAETGLHYN 1369 Query: 284 RHRYYDPLQGRYITQDPIGLKGGWNFYQYPLNPVQYIDSMGLASKYGHLNNGGYGARPNK 343 RHRYY+P GR++T DPI L GG N YQY NP ++D +GL+ + + NK Sbjct: 1370 RHRYYNPGTGRFLTPDPIKLAGGLNNYQYVPNPTGWVDPLGLSGECPD-------SEKNK 1422 Query: 344 PPTPD---PSKLPDIAKQLRLP 362 P + PS D +++LR P Sbjct: 1423 IPVEEASSPSNSYDNSEELRPP 1444 Score = 41.6 bits (96), Expect = 0.059, Method: Compositional matrix adjust. Identities = 27/94 (28%), Positives = 40/94 (42%), Gaps = 19/94 (20%) Query: 45 YHYDSQHRLVHYTRTQYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTW 104 Y YD QHRL+ + + + Y YD GRR+ K + +T Sbjct: 1225 YRYDCQHRLIGVSLPGGSV----ASYKYDAFGRRIEKTI---------------DGHITE 1265 Query: 105 YGWDGDRLTTIQNDRTRIQTIYQPGSFTPLIRVE 138 + W G+RL D IY+PG+F PL ++ Sbjct: 1266 FLWQGERLIAESADNRYRSYIYEPGTFRPLAMLD 1299 >UniRef50_B1JCT8 RHS protein n=1 Tax=Pseudomonas putida W619 RepID=B1JCT8_PSEPW Length = 231 Score = 95.5 bits (236), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 46/96 (47%), Positives = 62/96 (64%), Gaps = 1/96 (1%) Query: 233 LALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEESGLYYNRHRYYDPLQ 292 + L ++EG W A Y WG + E H ++Q +R GQ ++ E+GL+YN RYYDP Sbjct: 1 MELSNSEGEIVWQATYRSWG-AIEELKVHDIEQNLRFQGQYFESETGLHYNTLRYYDPEV 59 Query: 293 GRYITQDPIGLKGGWNFYQYPLNPVQYIDSMGLASK 328 GR++TQDPIGL G NFYQY +PV ++D GLA K Sbjct: 60 GRFVTQDPIGLGDGMNFYQYAPSPVMWVDPWGLAFK 95 >UniRef50_A1TTQ1 Rhs family protein n=1 Tax=Acidovorax citrulli AAC00-1 RepID=A1TTQ1_ACIAC Length = 357 Score = 95.5 bits (236), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 57/166 (34%), Positives = 81/166 (48%), Gaps = 37/166 (22%) Query: 220 KIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGN-------------------------- 253 +I+ Y CD G PL L +G W A+Y WG Sbjct: 83 RIYWYQCDQIGAPLELTDAQGHVAWAADYKVWGEAALRKVLKSATGTDALPGPRHKGHGP 142 Query: 254 LLNEENPHQ----------LQQLIRLPGQQYDEESGLYYNRHRYYDPLQGRYITQDPIGL 303 +L+E + ++ L+Q R GQQ+D E+GL+YNR RYYDP GR+ +QDP+GL Sbjct: 143 VLDEHDAYKNQLSHSVSPFLEQPFRFQGQQFDAETGLHYNRFRYYDPSIGRFFSQDPVGL 202 Query: 304 KGGWNFYQYPLNPVQYIDSMGLASK-YGHLNNGGYGARPNKPPTPD 348 GG + + Y NP +ID +GL++K Y L P+KP T + Sbjct: 203 HGGIHGFAYAPNPNNWIDPLGLSNKCYNCLPKCTDINAPHKPKTAE 248 >UniRef50_C3JXH8 Putative Rhs protein n=1 Tax=Pseudomonas fluorescens SBW25 RepID=C3JXH8_PSEFS Length = 1597 Score = 95.5 bits (236), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 100/338 (29%), Positives = 140/338 (41%), Gaps = 52/338 (15%) Query: 15 YRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYLYDP 74 Y++D GRL ++ EG + R H Y YD L T+ E Y YDP Sbjct: 1123 YQHDHQGRLFNQSIGDAEGPVY----RRH-YDYDKSGNLTRLLDTRKGE----HHYHYDP 1173 Query: 75 LGR--RVAKRVWRRER---DLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQPG 129 L R R +ER D G + + +P G+RL IQ D Y Sbjct: 1174 LSRLTRADHSQGEQERFGHDPAGNLLMQNRPGPDIVA--GNRLM-IQGDHQ-----YDYD 1225 Query: 130 SFTPLIRVETATGELAKTQRR-----SLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEI 184 +F LIR G T+ R L T + +G S + P R S+ Sbjct: 1226 AFGNLIRERRGKGHRLVTEYRYDCQHRLIGTKKPNG--QTASYRYDP-----FGRRISKT 1278 Query: 185 LADRVSEESRRWLASCGLTVEQMQNQMDPVYTP---------------ARKIHLYHCDHR 229 + D +E W + + +Y P K + Y DH Sbjct: 1279 VGDVTTEFF--WKGDTLIAEHHAERHRSYLYEPDSFRPLALLEGFGPKETKAYHYQLDHL 1336 Query: 230 GLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEESGLYYNRHRYYD 289 G P L + +G W A Y +G + + ++ +R GQ +D+ESGL+YNRHRYY Sbjct: 1337 GTPQELTAADGEIVWSAHYRAYGEI-TRLDIGKIDNPLRFQGQYFDQESGLHYNRHRYYH 1395 Query: 290 PLQGRYITQDPIGLKGGWNFYQYPLNPVQYIDSMGLAS 327 P GRY+T DP+ L GG N YQY NP ++D +GL+S Sbjct: 1396 PDIGRYLTPDPVKLTGGINAYQYVPNPTGWVDPLGLSS 1433 Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust. Identities = 41/138 (29%), Positives = 55/138 (39%), Gaps = 34/138 (24%) Query: 5 NRIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHR----YHYDSQHRLVHYTRTQ 60 NR+ + Y YD G L IR + HR Y YD QHRL+ + Sbjct: 1212 NRLMIQGDHQYDYDAFGNL-----------IRERRGKGHRLVTEYRYDCQHRLIGTKKPN 1260 Query: 61 YAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRT 120 + Y YDP GRR++K V D+T T + W GD L + Sbjct: 1261 GQT----ASYRYDPFGRRISKTVG----DVT-----------TEFFWKGDTLIAEHHAER 1301 Query: 121 RIQTIYQPGSFTPLIRVE 138 +Y+P SF PL +E Sbjct: 1302 HRSYLYEPDSFRPLALLE 1319 >UniRef50_C5ALM7 YD repeat protein n=19 Tax=Proteobacteria RepID=C5ALM7_BURGB Length = 1425 Score = 94.7 bits (234), Expect = 6e-18, Method: Compositional matrix adjust. Identities = 46/113 (40%), Positives = 63/113 (55%), Gaps = 1/113 (0%) Query: 218 ARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLL-NEENPHQLQQLIRLPGQQYDE 276 A +I+ +H D G P + G W +Y WG + N+ P ++ Q +R GQ D+ Sbjct: 1178 ATRIYHFHTDVSGAPQEATNEAGDIVWAGQYSAWGKVAPNQHAPARIDQPLRYAGQYADD 1237 Query: 277 ESGLYYNRHRYYDPLQGRYITQDPIGLKGGWNFYQYPLNPVQYIDSMGLASKY 329 + L+YN R+YDP GR+I QDPIGL GG N YQY N + + D GLA Y Sbjct: 1238 STELHYNTFRFYDPDVGRFINQDPIGLMGGLNLYQYAPNSIAWTDWWGLAGSY 1290 Score = 54.3 bits (129), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 43/135 (31%), Positives = 66/135 (48%), Gaps = 16/135 (11%) Query: 5 NRIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEP 64 NR+ + + YD G L K +R ++R ++ YD Q RLV RTQ A Sbjct: 1041 NRLRMWQNLRFEYDPFGNLATK--------LRGANQR-QQFTYDGQDRLVA-VRTQDARG 1090 Query: 65 LVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQT 124 +VE+R+ YDPLGRR+AK R+ ++ + + + W+G RL D Sbjct: 1091 VVETRFAYDPLGRRIAKTDIVRDA-----RGVALREETKRFVWEGLRLAQEVRDTGVSSY 1145 Query: 125 IYQPGS-FTPLIRVE 138 +Y P + +TP RV+ Sbjct: 1146 VYSPDAPYTPAARVD 1160 >UniRef50_B4SV70 Rhs-family protein n=42 Tax=Enterobacteriaceae RepID=B4SV70_SALNS Length = 1359 Score = 94.7 bits (234), Expect = 7e-18, Method: Compositional matrix adjust. Identities = 47/111 (42%), Positives = 68/111 (61%), Gaps = 2/111 (1%) Query: 218 ARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWG-NLLNEENPHQ-LQQLIRLPGQQYD 275 +R++ YH D G P + + +G W +G N + N Q +RLPGQ +D Sbjct: 1142 SRQVWYYHTDVTGTPQEVTAADGTLVWAGYIRGFGENAADISNSGAYFHQPLRLPGQYFD 1201 Query: 276 EESGLYYNRHRYYDPLQGRYITQDPIGLKGGWNFYQYPLNPVQYIDSMGLA 326 +E+GL+YN RYY P GR+++QDPIGL+GG N Y Y NP+++ID +GLA Sbjct: 1202 DETGLHYNLFRYYAPECGRFVSQDPIGLRGGLNLYAYAPNPIRWIDPLGLA 1252 >UniRef50_C8QGI4 YD repeat protein n=1 Tax=Pantoea sp. At-9b RepID=C8QGI4_9ENTR Length = 465 Score = 94.0 bits (232), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 93/325 (28%), Positives = 128/325 (39%), Gaps = 89/325 (27%) Query: 4 DNRIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAE 63 DNR+ + + YD G L + R E H Y YD+++RL+ R E Sbjct: 109 DNRLGQWQNLFMEYDGWGNLIRR---------RRGTEEQH-YAYDAENRLIS-ARGTGPE 157 Query: 64 PLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQ 123 E+RY +D LGRR K V + +R + T + W G RL Q + Sbjct: 158 GAFEARYHWDALGRRTRKIV-----------TTARGTEETRFLWQGWRLLQEQQENGACS 206 Query: 124 T-IYQPG-SFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLE 181 T +Y P ++PL R++ Q + D L S +G P + +L Sbjct: 207 TYVYDPAEEWSPLARID-------HRQHEAQGDILWFSTDLNGA----PLEVTDASGKL- 254 Query: 182 SEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGA 241 RW G + ++ Q D VY A + L H Sbjct: 255 -------------RWSGQYG-SFGEVTRQTDGVYRRASQTSLSH---------------- 284 Query: 242 TEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEESGLYYNRHRYYDPLQGRYITQDPI 301 Q +R GQ D E+GL+YN RYYDP GR+ QDPI Sbjct: 285 -----------------------QPLRYAGQYADAETGLHYNLFRYYDPQTGRFTVQDPI 321 Query: 302 GLKGGWNFYQYPLNPVQYIDSMGLA 326 GL GGWN YQY NP+ +ID GL+ Sbjct: 322 GLAGGWNLYQYAPNPLTWIDPTGLS 346 >UniRef50_A1TSU8 YD repeat protein n=4 Tax=Acidovorax RepID=A1TSU8_ACIAC Length = 1586 Score = 94.0 bits (232), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 95/367 (25%), Positives = 127/367 (34%), Gaps = 123/367 (33%) Query: 3 PDNRIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYA 62 P NR+A + YD HG E+ R Y Y +H++V +Y Sbjct: 1177 PHNRLAVYQDLRFTYDLHGNTIER---------RIGWHTVQHYRYSPEHQIVEARVVRYR 1227 Query: 63 EPLVE-------------SRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDG 109 E E + Y YD LGRR+ KR D G T + +DG Sbjct: 1228 ERPAEGHAEPAPATTEQVTHYRYDALGRRIDKR------DAFG---------RTAFLYDG 1272 Query: 110 DRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVF 169 D L + +Y+P SF P Sbjct: 1273 DLLAGELRGSKLSEYLYEPDSFVP------------------------------------ 1296 Query: 170 PPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHR 229 L +LESE W ++ + P A + Y CD Sbjct: 1297 -------LAKLESE------------WKGEAAKERDEDKESARPKDFAA---YYYQCDQI 1334 Query: 230 GLPLALVSTEGATEWCAEYDEWGN----------------LLNEENPHQL---------- 263 G P L +G W A Y WG E P L Sbjct: 1335 GAPQELTDEQGRIVWAASYQVWGQTRALQVMRTGTDDAAVFTQAERPLALAAKGDVQALN 1394 Query: 264 --QQLIRLPGQQYDEESGLYYNRHRYYDPLQGRYITQDPIGLKGGWNFYQYPLNPVQYID 321 +Q +R GQ +D E+GL+YNR RYYDP+ GR++ QDPIGL GG N + Y NP+ + D Sbjct: 1395 FVEQPLRFQGQYFDGETGLHYNRFRYYDPVTGRFVHQDPIGLAGGNNLFFYAPNPLIWND 1454 Query: 322 SMGLASK 328 +GL K Sbjct: 1455 PLGLKPK 1461 >UniRef50_C9Y459 Putative uncharacterized protein n=1 Tax=Cronobacter turicensis RepID=C9Y459_CROTZ Length = 1523 Score = 94.0 bits (232), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 100/349 (28%), Positives = 153/349 (43%), Gaps = 60/349 (17%) Query: 16 RYDRHGRLTEKT------DLIPEGVIRTD--DERTHRYHYDSQHRLVHYTRTQY------ 61 RYD GR+T++T +L+ E R D D+ + H DS +QY Sbjct: 1066 RYDSAGRVTQRTVLDARRELVFERRYRWDRTDQIVQQIHTDSTPATPGEKYSQYLWGYDA 1125 Query: 62 -------AEPLVESRYLYDPLGRRVAKR---VWRRER--------DLTGWMSLSRKPQVT 103 EP E R+ +D G R + VW D G+ L+R+ Sbjct: 1126 AGQVTKAVEPQKEERFFWDAAGNRTEEHRNPVWHNLLLRLDGLKLDYDGFGRLTRRQ--- 1182 Query: 104 WYGWDGDRLTTIQ----NDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQS 159 D+ +Q +D R++ I G+ T RVE L + + L + Sbjct: 1183 ------DKSGVVQHFAYDDEQRVKEIRFEGN-TKFRRVEYRYDPLGRRTHK----ILWRY 1231 Query: 160 GGEDGGSVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPAR 219 G +D ++ F +Q+ +DR + +++ + G + E + ++D VY Sbjct: 1232 GEKDPETIRFDWQGLQLAGEQ-----SDREPDHYVQYVYTEG-SYEPLA-RVDSVYDDC- 1283 Query: 220 KIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQ--QLIRLPGQQYDEE 277 +I+ YH + GLP + G T W ++ WG E + Q Q Q +R GQ D E Sbjct: 1284 EIYWYHTELNGLPERVTDANGQTVWRGQFSTWGETERELSVPQWQVPQNLRFQGQYLDRE 1343 Query: 278 SGLYYNRHRYYDPLQGRYITQDPIGLKGGWNFYQYPLNPVQYIDSMGLA 326 SGL+YN RYYDP+ GRY DPIGL GG N Y Y +P+ ++D +GL Sbjct: 1344 SGLHYNLFRYYDPVAGRYTQMDPIGLLGGINTYGYVPDPLTWVDPLGLC 1392 >UniRef50_A8ZSG6 YD repeat protein n=1 Tax=Desulfococcus oleovorans Hxd3 RepID=A8ZSG6_DESOH Length = 423 Score = 92.8 bits (229), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 51/119 (42%), Positives = 68/119 (57%), Gaps = 4/119 (3%) Query: 212 DPVYTPAR-KIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRLP 270 DP++ + YH DH G P L ++ GA W A+Y+ +G+ E ++ +R P Sbjct: 236 DPLFMKVSGNYYFYHNDHLGTPQKLTASNGAVVWSAKYESFGDATVE--IETVENNLRFP 293 Query: 271 GQQYDEESGLYYNRHRYYDPLQGRYITQDPIGLKGGWNFYQYPLNPV-QYIDSMGLASK 328 GQ +D ESGL+YN HRYY P GR++ DPIGL+GG N Y Y N V D GL SK Sbjct: 294 GQYFDGESGLHYNLHRYYAPELGRFLKDDPIGLRGGINQYIYADNNVSNNTDPYGLFSK 352 >UniRef50_C6M9F5 RHS family protein n=2 Tax=Bacteria RepID=C6M9F5_NEISI Length = 448 Score = 92.8 bits (229), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 45/110 (40%), Positives = 61/110 (55%), Gaps = 1/110 (0%) Query: 219 RKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEEN-PHQLQQLIRLPGQQYDEE 277 ++IH +HCD G+P + +G W Y WG L E Q RL Q D E Sbjct: 209 QQIHYFHCDQIGIPREMTDKDGNLLWFGNYTGWGRLKEETKVTDSAYQPFRLQNQYADRE 268 Query: 278 SGLYYNRHRYYDPLQGRYITQDPIGLKGGWNFYQYPLNPVQYIDSMGLAS 327 +GL+YN RYY+P GR++ QDPIGL+GG N Y++ N ++D GL S Sbjct: 269 TGLHYNFFRYYEPDAGRFVNQDPIGLEGGENLYKFAPNAQNWVDIFGLWS 318 >UniRef50_C6M9F4 Rhs family protein n=8 Tax=Neisseria RepID=C6M9F4_NEISI Length = 632 Score = 92.4 bits (228), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 49/118 (41%), Positives = 66/118 (55%), Gaps = 3/118 (2%) Query: 219 RKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEEN-PHQLQQLIRLPGQQYDEE 277 ++ H +HCD G+P + +G W Y WG L E Q RL Q D E Sbjct: 415 QQTHYFHCDQIGIPREMTDKDGNLLWFGNYTGWGRLKEETRVTDSAYQPFRLQNQYADRE 474 Query: 278 SGLYYNRHRYYDPLQGRYITQDPIGLKGGWNFYQYPLNPVQYIDSMGL--ASKYGHLN 333 +GL+YN RYY+P GR++ QDPIGL GG N YQ+ N ++ID +GL +S+ G LN Sbjct: 475 TGLHYNFFRYYEPDAGRFVNQDPIGLLGGANPYQFASNITEWIDPLGLVKSSQSGGLN 532 >UniRef50_C9Y462 Putative uncharacterized protein n=1 Tax=Cronobacter turicensis RepID=C9Y462_CROTZ Length = 252 Score = 92.4 bits (228), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 50/119 (42%), Positives = 69/119 (57%), Gaps = 3/119 (2%) Query: 210 QMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQ--QLI 267 ++D V+ +I+ YH + GLP + +G T W ++ WG E + Q Q Q + Sbjct: 3 RVDSVFDDC-EIYWYHTELNGLPERVTDADGQTVWRGQFSTWGETERELSVPQWQVPQNL 61 Query: 268 RLPGQQYDEESGLYYNRHRYYDPLQGRYITQDPIGLKGGWNFYQYPLNPVQYIDSMGLA 326 R GQ D ESGL+YN RYYDP+ GRY DPIGL GG N Y Y +P+ ++D +GLA Sbjct: 62 RFQGQYLDRESGLHYNLFRYYDPVAGRYTQMDPIGLAGGINTYAYVGDPLTWVDPLGLA 120 >UniRef50_Q2SFS1 Rhs family protein n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SFS1_HAHCH Length = 295 Score = 91.7 bits (226), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 46/99 (46%), Positives = 59/99 (59%), Gaps = 1/99 (1%) Query: 235 LVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEESGLYYNRHRYYDPLQGR 294 + + EG W A Y +GNL ++ +Q +R GQ YDEE+GL+YNR RYYDP R Sbjct: 1 MTNAEGEVVWSARYKAYGNLA-LQDVEDVQNPLRFQGQYYDEETGLHYNRRRYYDPSAAR 59 Query: 295 YITQDPIGLKGGWNFYQYPLNPVQYIDSMGLASKYGHLN 333 +I QDP+GL GG N YQY NP ++D GL K N Sbjct: 60 FINQDPVGLLGGDNNYQYAPNPTGWVDPYGLTCKENSWN 98 >UniRef50_Q83LZ1 Putative Rhs-family protein n=1 Tax=Shigella flexneri RepID=Q83LZ1_SHIFL Length = 211 Score = 91.7 bits (226), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 41/92 (44%), Positives = 58/92 (63%) Query: 235 LVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEESGLYYNRHRYYDPLQGR 294 + ++G W Y WGN + E++ ++Q +R GQ D E+GL+YN HRYYDP GR Sbjct: 1 MTDSDGKIVWETGYQVWGNTIQEKDHGGVEQNLRYQGQYLDRETGLHYNLHRYYDPDVGR 60 Query: 295 YITQDPIGLKGGWNFYQYPLNPVQYIDSMGLA 326 ++ DPIGL+GG N Y Y NP++Y D +GL Sbjct: 61 FMVTDPIGLRGGLNLYSYAPNPLKYADPLGLT 92 >UniRef50_C8Q7Z5 YD repeat protein n=8 Tax=Enterobacteriaceae RepID=C8Q7Z5_9ENTR Length = 1507 Score = 91.7 bits (226), Expect = 6e-17, Method: Compositional matrix adjust. Identities = 53/137 (38%), Positives = 72/137 (52%), Gaps = 10/137 (7%) Query: 208 QNQMDPV-----YTPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENP-- 260 +N +P+ Y +++ YH + GLP + G T W + WG E Sbjct: 1246 ENSYEPIARVDSYQQHAEVYWYHTEINGLPDRVTDIRGDTVWQGAFAAWGRTTRESTGVD 1305 Query: 261 HQLQQLIRLPGQQYDEESGLYYNRHRYYDPLQGRYITQDPIGLKGGWNFYQYPLNPVQYI 320 ++ Q +R GQ D E+GL+YN RYYDP GRY DPIGL GG N YQY + + I Sbjct: 1306 WEVPQNLRFQGQYLDRETGLHYNTFRYYDPCGGRYTQLDPIGLMGGLNLYQYAPDVLTGI 1365 Query: 321 DSMGLASKYGHLNNGGY 337 D +GLA++ LNNG Y Sbjct: 1366 DPLGLATR---LNNGQY 1379 Score = 61.6 bits (148), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 42/139 (30%), Positives = 67/139 (48%), Gaps = 21/139 (15%) Query: 4 DNRIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAE 63 DN + R + YD GR++E+ D GV++ R+ YD +HR+ AE Sbjct: 1137 DNLLKRLEGIRWEYDGFGRMSERHD-SQRGVVQ-------RFSYDDEHRIREVLIEGDAE 1188 Query: 64 PLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQND---RT 120 ++Y YD LGRR+ K+VWRR +P+ T Y W G ++ +D Sbjct: 1189 -YTRAQYQYDALGRRIGKQVWRRH---------VAQPECTHYAWSGMQMVGEHSDSKPEA 1238 Query: 121 RIQTIYQPGSFTPLIRVET 139 +Q +Y S+ P+ RV++ Sbjct: 1239 AVQYVYAENSYEPIARVDS 1257 >UniRef50_Q2SGE8 Rhs family protein n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SGE8_HAHCH Length = 1452 Score = 90.5 bits (223), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 53/130 (40%), Positives = 71/130 (54%), Gaps = 3/130 (2%) Query: 226 CDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEESGLYYNRH 285 D+ G P A+ +EG W A WG L N + ++ R PGQ DEE+GLYYNR Sbjct: 1172 ADYLGTPNAMYDSEGRQVWSANISVWGELRNLKG-NRGACPFRWPGQYEDEETGLYYNRF 1230 Query: 286 RYYDPLQGRYITQDPIGLKGGWNFYQYPLNPVQYIDSMGLASKYGHLNNGGYGARPNKPP 345 RYYDP G+YI QDPI +KGG N Y+Y + +ID++GL G + G G R Sbjct: 1231 RYYDPDSGQYIRQDPIRIKGGLNLYKYVSDVTTWIDTLGLQG--GSASYGRSGRRIGHAD 1288 Query: 346 TPDPSKLPDI 355 T K+ ++ Sbjct: 1289 TDGLEKIGEL 1298 >UniRef50_B7LTT0 Putative uncharacterized protein n=4 Tax=Enterobacteriaceae RepID=B7LTT0_ESCF3 Length = 1543 Score = 90.5 bits (223), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 48/118 (40%), Positives = 62/118 (52%), Gaps = 4/118 (3%) Query: 217 PARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEEN----PHQLQQLIRLPGQ 272 P +++ YH G P + ++G W A WGN+ EEN QQ +R GQ Sbjct: 1290 PWQRVLYYHTLPNGYPQCMTDSDGGIVWRARVQLWGNIRFEENRDIYSVHPQQNLRFAGQ 1349 Query: 273 QYDEESGLYYNRHRYYDPLQGRYITQDPIGLKGGWNFYQYPLNPVQYIDSMGLASKYG 330 D E+GL+YN RY+ P GR+ DPIGL GG N Y Y NP+ YID +GL G Sbjct: 1350 YLDRETGLHYNTFRYFLPESGRFSQPDPIGLAGGLNLYAYAPNPLSYIDPLGLCKLRG 1407 Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 42/143 (29%), Positives = 65/143 (45%), Gaps = 21/143 (14%) Query: 3 PDNRIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYA 62 P N++ + Y +D GRL + + +RT ++ R HYD HRLV Sbjct: 1162 PANQVTLGGEFRYTWDGFGRLARREN------VRTGVKQ--RMHYDDAHRLV-TVEILND 1212 Query: 63 EPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRT-- 120 + YD LGRR KR WR+ + KP+ T + W G RL N+++ Sbjct: 1213 RDWSRVTFSYDALGRRTEKRAWRQG---------AEKPERTVFEWSGMRLCGEHNEKSPA 1263 Query: 121 -RIQTIYQPGSFTPLIRVETATG 142 +Y+ S+ PL RV+ ++G Sbjct: 1264 AHTLYLYEENSYQPLARVDRSSG 1286 >UniRef50_C1M4X0 Predicted protein n=1 Tax=Citrobacter sp. 30_2 RepID=C1M4X0_9ENTR Length = 1494 Score = 90.1 bits (222), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 45/118 (38%), Positives = 63/118 (53%), Gaps = 11/118 (9%) Query: 219 RKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQL-----------QQLI 267 +++ Y C H G+P AL +G W + + WG +E + ++ + Sbjct: 1255 QRVDYYRCSHNGMPQALTDEDGKLHWRQDVETWGETRSEYADEEGGRWRKIWGGAPEENL 1314 Query: 268 RLPGQQYDEESGLYYNRHRYYDPLQGRYITQDPIGLKGGWNFYQYPLNPVQYIDSMGL 325 R GQ D E+GL+YN RYY P GR+IT DPIGL GG N Y Y NP+ +ID +GL Sbjct: 1315 RFAGQYLDRETGLHYNTFRYYAPDMGRFITPDPIGLAGGINLYSYAPNPLSWIDPLGL 1372 Score = 42.7 bits (99), Expect = 0.026, Method: Compositional matrix adjust. Identities = 43/141 (30%), Positives = 65/141 (46%), Gaps = 21/141 (14%) Query: 5 NRIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYT-RTQYAE 63 NR + + RYD +GR+ +K P G+ R Y YDS+HR+ T A Sbjct: 1121 NRQTQCGNGACRYDVYGRMVQKPG--PGGMWR--------YGYDSEHRMTEAVLDTPDAT 1170 Query: 64 PLVESR----YLYDPLGRRVAKRVWRRERDLTG--WMSLSRKPQVTWYGWDGDRLTTIQN 117 +R + YDP GRR K R E ++ ++ +VT + W+G RL Sbjct: 1171 GAGNTRHRVIFTYDPFGRRTEK---RSEVTVSAPDDGRVTGAQEVTTFVWEGFRLLAETR 1227 Query: 118 DRTRIQTIYQ-PGSFTPLIRV 137 + + +Y+ GS+TPL RV Sbjct: 1228 NGQSLVYVYEGAGSYTPLARV 1248 >UniRef50_A7FDK7 YD/RHS repeat protein n=25 Tax=Enterobacteriaceae RepID=A7FDK7_YERP3 Length = 1527 Score = 90.1 bits (222), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 48/113 (42%), Positives = 63/113 (55%), Gaps = 8/113 (7%) Query: 220 KIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNL------LNEENPHQLQQLIRLPGQQ 273 K+H DH G P L++ +G W + WG NEE+ ++ +R GQ Sbjct: 1280 KLHYVVADHLGTPRELLNEQGKVVWASRLSTWGQAELWRQAANEED--RVSCNLRFAGQY 1337 Query: 274 YDEESGLYYNRHRYYDPLQGRYITQDPIGLKGGWNFYQYPLNPVQYIDSMGLA 326 D ESGL+YNR RYYD G+Y+ DPIGL GG N Y Y NPV+Y+D +GL Sbjct: 1338 ADAESGLHYNRFRYYDGETGQYLCPDPIGLAGGLNPYGYVHNPVKYVDPLGLC 1390 >UniRef50_A1TTP6 YD repeat protein n=2 Tax=Acidovorax citrulli AAC00-1 RepID=A1TTP6_ACIAC Length = 1554 Score = 90.1 bits (222), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 49/143 (34%), Positives = 69/143 (48%), Gaps = 36/143 (25%) Query: 220 KIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNL------------------------- 254 +I+ Y CD G PL L +G W A+Y WG Sbjct: 1283 RIYWYQCDQIGAPLELTDAQGYIAWAADYKVWGEATLRAVPRTATGTDGVSGERRRGHGP 1342 Query: 255 ---LNEEN--------PHQLQQLIRLPGQQYDEESGLYYNRHRYYDPLQGRYITQDPIGL 303 ++E P ++Q R GQQ+DEE+GL+YNR RYY+P GR+++QDPIGL Sbjct: 1343 VMDVHEGGGEKARPTPPAIIEQPFRFQGQQFDEETGLHYNRFRYYEPSVGRFVSQDPIGL 1402 Query: 304 KGGWNFYQYPLNPVQYIDSMGLA 326 GG N + Y +P ++D GL+ Sbjct: 1403 LGGVNSFTYAPSPNNWMDPFGLS 1425 Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 42/135 (31%), Positives = 55/135 (40%), Gaps = 20/135 (14%) Query: 4 DNRIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAE 63 DNR+ + YD HG + +T G R T +++ H+LV + Sbjct: 1160 DNRLRFYQDLHFEYDVHGNVVRRT----RGNRRAGHHETTELRWNADHQLVEAASHRNGV 1215 Query: 64 PLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQ 123 + Y YD LGRRVAK D G T Y WDGD + Q Sbjct: 1216 TQA-THYAYDALGRRVAKA------DAFG---------TTRYLWDGDLMVHSQRGGKASL 1259 Query: 124 TIYQPGSFTPLIRVE 138 IY+PGSF PL V+ Sbjct: 1260 FIYEPGSFVPLATVQ 1274 >UniRef50_B5MRU6 Rhs-family protein n=9 Tax=Gammaproteobacteria RepID=B5MRU6_SALET Length = 216 Score = 90.1 bits (222), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 44/103 (42%), Positives = 63/103 (61%) Query: 235 LVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEESGLYYNRHRYYDPLQGR 294 + G W A Y WGNL +E+ +QQ +R GQ D E+GL+YN +R+YDP G+ Sbjct: 1 MTDGGGNIVWEAGYQVWGNLTHEKETRPVQQNLRFQGQYLDRETGLHYNLYRFYDPDIGK 60 Query: 295 YITQDPIGLKGGWNFYQYPLNPVQYIDSMGLASKYGHLNNGGY 337 +I+ DPI ++GG N YQY NP+++ID +GL + G G Y Sbjct: 61 FISGDPISIRGGINLYQYAPNPIKWIDPLGLYNGEGQRELGKY 103 >UniRef50_C6AKX3 Rhs family protein n=4 Tax=Aggregatibacter aphrophilus NJ8700 RepID=C6AKX3_AGGAN Length = 1917 Score = 90.1 bits (222), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 44/108 (40%), Positives = 62/108 (57%), Gaps = 3/108 (2%) Query: 221 IHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNE---ENPHQLQQLIRLPGQQYDEE 277 I+ +H D G+P + ++G W YD WG+L+ + E Q RL Q +DEE Sbjct: 1675 INYFHSDQIGIPREMTDSDGKLIWKGRYDAWGSLIRDSYRETASDSHQPFRLQNQYFDEE 1734 Query: 278 SGLYYNRHRYYDPLQGRYITQDPIGLKGGWNFYQYPLNPVQYIDSMGL 325 +GL+YN RYY+P+ GR+ITQDPI L GG N Y++ D +GL Sbjct: 1735 TGLHYNFFRYYEPVLGRFITQDPIKLAGGNNLYRFEGTVQNQTDPLGL 1782 Score = 42.0 bits (97), Expect = 0.050, Method: Compositional matrix adjust. Identities = 46/144 (31%), Positives = 59/144 (40%), Gaps = 34/144 (23%) Query: 4 DNRIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHY-TRTQY- 61 DNR+ + YD G L E + + RY YD ++RLV R +Y Sbjct: 1539 DNRVVNYRGIRFTYDSLGNLVE---------CQAANGDYQRYTYDLKNRLVQADIRDRYK 1589 Query: 62 AEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLT-------- 113 AE V Y YDPLGRRVAK ++ G L T + WDG L Sbjct: 1590 AESWV---YEYDPLGRRVAKSKLNKQ----GEQQLH-----TQFIWDGSHLVQEIRTGNH 1637 Query: 114 ---TIQNDRTRIQTIYQPGSFTPL 134 + DRT +PGS+ PL Sbjct: 1638 QQNAEKTDRTFTYIYSEPGSYEPL 1661 >UniRef50_C5AA19 Rhs family protein n=1 Tax=Burkholderia glumae BGR1 RepID=C5AA19_BURGB Length = 1596 Score = 89.7 bits (221), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 43/110 (39%), Positives = 61/110 (55%), Gaps = 6/110 (5%) Query: 220 KIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNL------LNEENPHQLQQLIRLPGQQ 273 ++ YHCD G P + G W A Y WG +++ +++ +R GQ Sbjct: 1325 RLAFYHCDQIGTPRMITDELGEIVWEARYQAWGEARDVIERVSKATGERVRNPLRFQGQH 1384 Query: 274 YDEESGLYYNRHRYYDPLQGRYITQDPIGLKGGWNFYQYPLNPVQYIDSM 323 +D+ESGL YNRHRYY GRY+++DP L GG N + Y NPVQ+ID + Sbjct: 1385 FDDESGLAYNRHRYYAADVGRYVSKDPAELLGGLNEFAYVPNPVQWIDPL 1434 Score = 42.0 bits (97), Expect = 0.049, Method: Compositional matrix adjust. Identities = 37/120 (30%), Positives = 51/120 (42%), Gaps = 26/120 (21%) Query: 15 YRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYLYDP 74 + YD G +TEK R R+ +D +RLV RT+ A E+RY YD Sbjct: 1192 FEYDAQGNVTEKRS----------PGRVQRFEWDGFNRLVG-VRTETATTRTEARYFYDA 1240 Query: 75 LGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQPGSFTPL 134 GRR+A+ V Q + +GWDGD L +Y+ G+F PL Sbjct: 1241 FGRRIARVV---------------DGQASVFGWDGDTLAYESGPEYSRHYLYEAGTFVPL 1285 >UniRef50_A3NNM1 Protein RhsD n=20 Tax=pseudomallei group RepID=A3NNM1_BURP6 Length = 1539 Score = 89.7 bits (221), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 42/110 (38%), Positives = 64/110 (58%), Gaps = 1/110 (0%) Query: 216 TPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQYD 275 + A + Y D G P+ ++ EG W A YD G + + + Q +RL GQ +D Sbjct: 1292 SKADATYFYQSDPNGAPVRMLDVEGNVAWEASYDANGGI-EQFGIQAMPQPLRLQGQYFD 1350 Query: 276 EESGLYYNRHRYYDPLQGRYITQDPIGLKGGWNFYQYPLNPVQYIDSMGL 325 E+G+ YNRHRYYD G+++++DPI L GG N Y+Y +N + + D +GL Sbjct: 1351 AETGMSYNRHRYYDARIGQFVSEDPIRLSGGENLYRYCVNSISWADPLGL 1400 >UniRef50_A0LJM9 YD repeat protein n=3 Tax=Syntrophobacter fumaroxidans MPOB RepID=A0LJM9_SYNFM Length = 1433 Score = 89.7 bits (221), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 48/109 (44%), Positives = 60/109 (55%), Gaps = 8/109 (7%) Query: 221 IHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLI---RLPGQQYDEE 277 ++ H D G P + + W A YD +G E H ++ R PGQ YD E Sbjct: 1199 VYFTHNDLLGTPEFMTDSTNTAVWEAAYDAFG----EATIHPASTVVNNFRFPGQYYDAE 1254 Query: 278 SGLYYNRHRYYDPLQGRYITQDPIGLKGGWNFYQYPLN-PVQYIDSMGL 325 +GL+YN HRYYDP GRY+T DPIGL GG N Y Y N P+ +ID GL Sbjct: 1255 TGLHYNWHRYYDPKTGRYMTPDPIGLAGGINPYTYAENDPINFIDLYGL 1303 >UniRef50_Q1K295 YD repeat n=4 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1K295_DESAC Length = 1468 Score = 89.7 bits (221), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 47/105 (44%), Positives = 59/105 (56%), Gaps = 5/105 (4%) Query: 225 HCDHRGLPLALVSTEGATEWCAEYDEWGNL-LNEENPHQLQQLI---RLPGQQYDEESGL 280 H D G P+ L G W A+Y +G +N + +++ R PGQ +D ESGL Sbjct: 1276 HTDQIGAPILLTDATGTAVWSAQYAPFGQATINNDVDGDGTEVVCNLRFPGQYFDAESGL 1335 Query: 281 YYNRHRYYDPLQGRYITQDPIGLKGGWNFYQYP-LNPVQYIDSMG 324 +YN HRYY+P GRYIT DPIGL GG N Y Y NPV +D G Sbjct: 1336 HYNWHRYYEPRSGRYITLDPIGLAGGINLYAYANRNPVNVVDPTG 1380 >UniRef50_B8FBZ2 YD repeat protein n=1 Tax=Desulfatibacillum alkenivorans AK-01 RepID=B8FBZ2_DESAA Length = 685 Score = 89.4 bits (220), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 46/105 (43%), Positives = 61/105 (58%), Gaps = 2/105 (1%) Query: 222 HLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEESGLY 281 + YH D G P LV G+T W A Y +G + + ++ +R PGQ YD E+GL+ Sbjct: 240 YYYHNDRIGAPQVLVRANGSTAWSATYSAYGKASVDPDS-DVENNLRFPGQYYDAETGLH 298 Query: 282 YNRHRYYDPLQGRYITQDPIGLKGGWNFYQYPL-NPVQYIDSMGL 325 YN +RYYDP G Y + DP+GL GG N Y Y NP Y+D +GL Sbjct: 299 YNLNRYYDPEIGAYRSPDPLGLGGGVNLYAYTAGNPANYVDPLGL 343 >UniRef50_A4FJ21 YD repeat protein n=1 Tax=Saccharopolyspora erythraea NRRL 2338 RepID=A4FJ21_SACEN Length = 1670 Score = 89.4 bits (220), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 99/347 (28%), Positives = 129/347 (37%), Gaps = 106/347 (30%) Query: 5 NRIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEP 64 NR+ + YD GRL V R + R RY +DS +LV T + Sbjct: 1135 NRLVAAGAVQFEYDAQGRL----------VQRIEAGRGWRYAWDSYDQLVAVTTPEG--- 1181 Query: 65 LVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRL-----TTIQNDR 119 V RY YDP+GRR+AK+ + + QV + WDG L T Q R Sbjct: 1182 -VLWRYRYDPIGRRIAKQRLAADGAVA--------EQVDFV-WDGGTLIEQVHTDAQGRR 1231 Query: 120 TRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDR 179 T ++P TP+ + E G DG Sbjct: 1232 TVTTWEHRPDDDTPVAQHEI---------------------GADG--------------- 1255 Query: 180 LESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTE 239 SRR+ A DPV TP L++ Sbjct: 1256 -------------SRRFFAIV----------TDPVGTPTD---------------LIAPN 1277 Query: 240 GATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEESGLYYNRHRYYDPLQGRYITQD 299 G W WG L + P+ + +R PGQ D E+GL YN HRYYDP GRY++QD Sbjct: 1278 GVLAWHGRTSLWGKELPVQ-PNGVTTPLRFPGQYADAETGLNYNVHRYYDPATGRYLSQD 1336 Query: 300 PIGLKGGWNFYQYPLNPVQYIDSMGLASKYGHLNNGGYGARPNKPPT 346 P+GL N Y NP D +GLA + G G N+PPT Sbjct: 1337 PLGLAPAPNPVAYVDNPHSAADPLGLAKGGTKRKHDGSG---NQPPT 1380 >UniRef50_D0HCV2 Rhs protein n=3 Tax=Vibrio mimicus VM223 RepID=D0HCV2_VIBMI Length = 1617 Score = 89.4 bits (220), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 104/341 (30%), Positives = 140/341 (41%), Gaps = 80/341 (23%) Query: 13 YLYRYDRHGRLTEKTDLIPEG-----VIRTDDERTHRY--HYDSQHRLVHYTRTQYAEPL 65 +L+ YD L ++ G V+ DD R R YD R++ R Sbjct: 1197 HLFGYDSELNLNQQGFATEYGDSDSNVVSLDDARVKRQSRQYDKAGRVLDTGRF------ 1250 Query: 66 VESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGD-RLTTIQ---NDRTR 121 RY YD GR V K ++ +P+ T + W+GD RLT I+ R R Sbjct: 1251 ---RYHYDKCGRVVEKTEYKD----------GFRPKTTRFVWNGDDRLTHIELPDGGRYR 1297 Query: 122 IQTIYQPGSFTPLIRVETATGELAKTQRRSL-----ADTLQQSGGEDGGSVVFPPVLVQM 176 + + PL R E TQR + A+ +Q S GSV+ Q Sbjct: 1298 YR-------YDPLGR--RVAKECLSTQRITEYLWDGANIVQHSQKTADGSVI------QE 1342 Query: 177 LDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALV 236 ++ L ES R LA V NQ A ++H DH G P L Sbjct: 1343 IEYL--------YEPESFRPLAQ----VTHKANQ-------ASQLHYIVTDHAGTPQELC 1383 Query: 237 STEGATEWCAEYDEWG---------NLLNEENPH--QLQQLIRLPGQQYDEESGLYYNRH 285 S G W E WG N E+ H +L +R GQ D ESGLYYN + Sbjct: 1384 SENGEVVWQGEQALWGHYQQRNTFPNHGIREHAHNDELYCDLRYQGQIEDRESGLYYNVN 1443 Query: 286 RYYDPLQGRYITQDPIGLKGGWNFYQYPLNPVQYIDSMGLA 326 RYYD G+Y++QDPIG GG Y NP++++D +GLA Sbjct: 1444 RYYDADSGQYLSQDPIGFSGGLRPQAYVFNPLEWVDPLGLA 1484 Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 44/138 (31%), Positives = 60/138 (43%), Gaps = 28/138 (20%) Query: 6 RIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPL 65 R+ + Y YD+ GR+ EKT+ +G +T R+ ++ RL H Sbjct: 1243 RVLDTGRFRYHYDKCGRVVEKTEY-KDGF----RPKTTRFVWNGDDRLTHIELPDGGR-- 1295 Query: 66 VESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQN---DRTRI 122 RY YDPLGRRVAK +R +T Y WDG + D + I Sbjct: 1296 --YRYRYDPLGRRVAKECLSTQR-------------ITEYLWDGANIVQHSQKTADGSVI 1340 Query: 123 QTI---YQPGSFTPLIRV 137 Q I Y+P SF PL +V Sbjct: 1341 QEIEYLYEPESFRPLAQV 1358 >UniRef50_D1SWH5 RHS protein (Fragment) n=1 Tax=Acidovorax avenae subsp. avenae ATCC 19860 RepID=D1SWH5_9BURK Length = 280 Score = 89.4 bits (220), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 47/128 (36%), Positives = 65/128 (50%), Gaps = 19/128 (14%) Query: 220 KIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEE-------------------NP 260 ++ +H D GLP + G W A + WG+ L E + Sbjct: 14 QVSYFHNDPSGLPEEVTDEAGEVRWRASWRTWGSALEERWEAVRIDGSAIPAVQQRHRDE 73 Query: 261 HQLQQLIRLPGQQYDEESGLYYNRHRYYDPLQGRYITQDPIGLKGGWNFYQYPLNPVQYI 320 L+Q +RL GQ D E+GL+YN RYYDP GR+I+ DPIGL GG N +Y +NP+ +I Sbjct: 74 DTLEQNLRLQGQYLDRETGLHYNTFRYYDPDMGRFISPDPIGLAGGLNLQRYAINPLAWI 133 Query: 321 DSMGLASK 328 D GL + Sbjct: 134 DPWGLCGE 141 >UniRef50_A9EW02 Conserved exported carbohydrate-binding protein,Rhs family n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=A9EW02_SORC5 Length = 1310 Score = 89.0 bits (219), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 40/102 (39%), Positives = 61/102 (59%) Query: 227 DHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEESGLYYNRHR 286 D G+P LVS G W A++ WG +L EE+P ++ L G DEE+GL Y RHR Sbjct: 1087 DAMGVPKELVSGRGQVAWRADHTLWGRVLAEESPAGVRAPFSLLGHYVDEETGLAYVRHR 1146 Query: 287 YYDPLQGRYITQDPIGLKGGWNFYQYPLNPVQYIDSMGLASK 328 Y+DP R++++DP+G GG N + + P + +D +GL ++ Sbjct: 1147 YFDPETARWLSRDPLGFDGGPNLFGFDGMPTEEVDPLGLMTR 1188 >UniRef50_B4ETQ2 Rhs-family protein n=9 Tax=Enterobacteriaceae RepID=B4ETQ2_PROMH Length = 1703 Score = 88.6 bits (218), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 48/120 (40%), Positives = 62/120 (51%), Gaps = 8/120 (6%) Query: 220 KIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNL--------LNEENPHQLQQLIRLPG 271 K+H DH+G P + S G W + WG + E +P+ + R G Sbjct: 1427 KLHYVVTDHQGTPREIFSEGGQASWAGRLNTWGQMQFWRYRDGKAENDPNYTECPFRFAG 1486 Query: 272 QQYDEESGLYYNRHRYYDPLQGRYITQDPIGLKGGWNFYQYPLNPVQYIDSMGLASKYGH 331 Q DEESGLYYNR RYYD G+Y++ DPIGL GG N Y Y P ++D GLA G+ Sbjct: 1487 QYEDEESGLYYNRFRYYDRETGQYLSPDPIGLLGGLNPYGYVHCPTGWVDPFGLAGGKGN 1546 >UniRef50_C6M5B1 Rhs-related protein n=7 Tax=Proteobacteria RepID=C6M5B1_NEISI Length = 1934 Score = 88.6 bits (218), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 47/110 (42%), Positives = 60/110 (54%), Gaps = 1/110 (0%) Query: 218 ARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPH-QLQQLIRLPGQQYDE 276 R+I YH D G+P + EG W +Y WG L E + Q RL Q YDE Sbjct: 1717 VREILYYHNDQIGIPREMTDEEGNIVWSGDYSGWGKLTQEGRLKLDVYQPFRLQNQYYDE 1776 Query: 277 ESGLYYNRHRYYDPLQGRYITQDPIGLKGGWNFYQYPLNPVQYIDSMGLA 326 E+GL+YN RYYDP GR+ QDPI L GG + Y N ++D++GLA Sbjct: 1777 ETGLHYNFFRYYDPEIGRFTQQDPIKLLGGESLYALAPNVFVWLDTLGLA 1826 >UniRef50_Q88FK6 RHS family protein, putative n=1 Tax=Pseudomonas putida KT2440 RepID=Q88FK6_PSEPK Length = 1530 Score = 88.6 bits (218), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 44/111 (39%), Positives = 65/111 (58%), Gaps = 2/111 (1%) Query: 218 ARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQ--LQQLIRLPGQQYD 275 + IH +H G P L ++G T W +++ WG ++NE + Q +Q +R GQ D Sbjct: 1298 SEAIHYFHTTLVGQPEQLTDSDGNTIWRSDHHGWGKIINEWHSQQNGREQNLRNQGQYID 1357 Query: 276 EESGLYYNRHRYYDPLQGRYITQDPIGLKGGWNFYQYPLNPVQYIDSMGLA 326 E+GL++N R+YDP GR+ T DP+G++GG N Y Y N V Y D +GL Sbjct: 1358 RETGLHFNIFRFYDPDIGRFTTTDPLGIEGGVNLYSYAPNIVNYSDPLGLC 1408 Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust. Identities = 43/143 (30%), Positives = 63/143 (44%), Gaps = 21/143 (14%) Query: 5 NRIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLV--HYTRTQYA 62 NR+ YRYDR GRL EK R + YD++ RLV R+ Sbjct: 1177 NRVLVYQDKRYRYDRFGRLCEK---------RIGSNWVQYFEYDAEQRLVCVEQYRSGER 1227 Query: 63 EPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRI 122 E +V + YDPLGRR++K V++R+ + R+ W G+ L +Q+ + Sbjct: 1228 ERVV---FAYDPLGRRISKEVYQRD-----YPEPRRRVLFHWQGF--RLLQEVQSGLASL 1277 Query: 123 QTIYQPGSFTPLIRVETATGELA 145 S+ PL RV+ G A Sbjct: 1278 YVYATVESYDPLARVDGKPGSEA 1300 >UniRef50_D0KWY8 YD repeat protein n=1 Tax=Halothiobacillus neapolitanus c2 RepID=D0KWY8_HALNC Length = 1338 Score = 88.6 bits (218), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 52/130 (40%), Positives = 68/130 (52%), Gaps = 5/130 (3%) Query: 214 VYTPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENP---HQLQQLIRLP 270 V+T + +I +H G P+A + W A Y +G L+ + +R P Sbjct: 841 VHTGSGRISYLLDNHLGAPIAATDAQAQVIWRAHYGPYGQQLDVADSLVKDHFSLSLRNP 900 Query: 271 GQQYDEESGLYYNRHRYYDPLQGRYITQDPIGLKGGWNFYQY-PLNPVQYIDSMGLA-SK 328 GQ D+ESGLYYN HRYYDP GRY++ DP+GL GG N Y Y NP+ Y D GL Sbjct: 901 GQWQDKESGLYYNDHRYYDPATGRYLSPDPLGLAGGLNAYAYVAANPIAYTDPYGLMLFA 960 Query: 329 YGHLNNGGYG 338 + NNG G Sbjct: 961 FDGTNNGAPG 970 >UniRef50_B1KGR6 YD repeat protein n=1 Tax=Shewanella woodyi ATCC 51908 RepID=B1KGR6_SHEWM Length = 1699 Score = 87.8 bits (216), Expect = 8e-16, Method: Compositional matrix adjust. Identities = 93/338 (27%), Positives = 129/338 (38%), Gaps = 89/338 (26%) Query: 6 RIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPL 65 R+ + YRYD +GR EK + R +T Y +D + +L+ R + Sbjct: 1305 RVETVGDHTYRYDANGRAVEKC--TRKAGFRP---QTTFYQWDEEDQLIQ-VRLANGDCW 1358 Query: 66 VESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTI 125 Y YDP GRR+AK + T L P Y WDG N+ Q Sbjct: 1359 ---HYQYDPFGRRIAKI-----KQSTKEQELRNTPSQFRYLWDG-------NNLVEQQKC 1403 Query: 126 YQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEIL 185 Y G+ LA T Q V+ P Sbjct: 1404 YADGT---------------------LAHTTQW---------VYEP-------------- 1419 Query: 186 ADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWC 245 S R LA LT QN + A ++H D G P L + G EW Sbjct: 1420 ------NSFRPLAQ--LTQNHGQNSQETADNLASELHYIVTDQAGTPRELCTENGDIEWR 1471 Query: 246 AEYDEWGN------LLNEENPHQ----------LQQLIRLPGQQYDEESGLYYNRHRYYD 289 E WG + ++ H+ + +R GQ +D E+GLYYNRHRYYD Sbjct: 1472 GEQSLWGEHHKWRLSVQAKSKHKKYLEDAANDPVNCDLRYQGQVFDSETGLYYNRHRYYD 1531 Query: 290 PLQGRYITQDPIGLKGGWNFYQYPLNPVQYIDSMGLAS 327 P +Y++ DPIG+ GG Y NP++++D GLA+ Sbjct: 1532 PETCQYLSPDPIGMAGGLRTQAYVHNPMEWVDPFGLAA 1569 >UniRef50_UPI00016A9A82 Rhs family protein n=2 Tax=Burkholderia oklahomensis RepID=UPI00016A9A82 Length = 1489 Score = 87.4 bits (215), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 49/120 (40%), Positives = 61/120 (50%), Gaps = 12/120 (10%) Query: 217 PARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQ------------ 264 P KI+ +H + G P L G W Y WGN + +E + Q Sbjct: 1246 PEAKIYYFHANASGAPEELTDGGGRVVWRTRYRAWGNTVLQEYAPEFQANPAGDVMQPLP 1305 Query: 265 QLIRLPGQQYDEESGLYYNRHRYYDPLQGRYITQDPIGLKGGWNFYQYPLNPVQYIDSMG 324 Q +RL GQ D E+G Y+ RYYDP GR+IT DPIGL GG N YQY NP+ +ID G Sbjct: 1306 QALRLQGQYEDLETGFCYSTFRYYDPDVGRFITPDPIGLAGGLNQYQYAPNPLTWIDPWG 1365 Score = 57.8 bits (138), Expect = 9e-07, Method: Compositional matrix adjust. Identities = 45/136 (33%), Positives = 58/136 (42%), Gaps = 27/136 (19%) Query: 5 NRIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHY-TRTQYAE 63 NR+ YRYD HGRL EK RT YD +H+LV T + E Sbjct: 1111 NRLLMSGDRRYRYDAHGRLVEK---------RTGGHTIQHLKYDVEHQLVEVNTVRRGVE 1161 Query: 64 PLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQ 123 V R+ YD LGRR+AK RD G T + WDG RL Q + Sbjct: 1162 QTV--RFSYDALGRRIAK------RDAFG---------TTRFAWDGMRLVQEQRGHQAVT 1204 Query: 124 TIYQPGSFTPLIRVET 139 +Y+ + PL R++ Sbjct: 1205 YLYEGDGYVPLARIDA 1220 >UniRef50_C9Y441 Putative uncharacterized protein n=1 Tax=Cronobacter turicensis RepID=C9Y441_CROTZ Length = 1394 Score = 87.0 bits (214), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 46/112 (41%), Positives = 58/112 (51%), Gaps = 2/112 (1%) Query: 216 TPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENP--HQLQQLIRLPGQQ 273 T A I+ +H G P L EG W WG L +E P Q +R+ GQ Sbjct: 1137 TQAPDIYWFHNQPNGTPERLTDVEGRVRWEGRNSAWGKLAHESTPLPTGYNQNLRMQGQY 1196 Query: 274 YDEESGLYYNRHRYYDPLQGRYITQDPIGLKGGWNFYQYPLNPVQYIDSMGL 325 D E+GL+YN RYYDP GR+ DPIGL GG N YQ+ N + ++D GL Sbjct: 1197 LDRETGLHYNLFRYYDPDCGRFTQHDPIGLAGGINLYQFAPNALGWVDPWGL 1248 Score = 55.5 bits (132), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 46/138 (33%), Positives = 66/138 (47%), Gaps = 20/138 (14%) Query: 5 NRIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTH-RYHYDSQHRLVHYTRT--QY 61 NR+ + +RYD HGR EK D+ +T RY YD +HRL Sbjct: 1014 NRVTQLNGIQWRYDIHGRTVEK-----------DNGQTRWRYRYDGEHRLTDVISQPRDR 1062 Query: 62 AEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTR 121 +P VE + YDPLGRR++K R + L G + K T + W+G RL +D Sbjct: 1063 NKPQVEVSFRYDPLGRRISK---TRRQFLAG--QPTGKAVTTRFVWEGFRLLQEIHDEVP 1117 Query: 122 IQTIYQ-PGSFTPLIRVE 138 + +Y P S+ PL R++ Sbjct: 1118 LTYVYSDPHSYEPLARID 1135 >UniRef50_Q6D1M4 Rhs protein n=5 Tax=Enterobacteriaceae RepID=Q6D1M4_ERWCT Length = 1618 Score = 87.0 bits (214), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 106/398 (26%), Positives = 165/398 (41%), Gaps = 71/398 (17%) Query: 3 PDNRIARDAHYLYRYDRHGRLTEKTD---------LIPEGVI---RTDDERTHR---YHY 47 D R+ Y+YD RLT TD L G + R D+ R + + Y Sbjct: 1157 ADGRVNDVLERRYQYDVLDRLTGITDSHWGEQAFRLNGAGQMTAERRDEGRRRQARLFGY 1216 Query: 48 DSQHRLVHYTRT--------QYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSR- 98 DS+ L ++ + + +V+S YD GR + + + D G +++ R Sbjct: 1217 DSEQNLCEVSQIAPGLDETLKVQDAVVQSSARYDAAGRVIERGHTQYRYDDCGRLAMKRE 1276 Query: 99 -----KPQVTWYGWD-GDRLTTIQN-DRTRIQTIYQPGSFTPLIRVETATGELAKTQRRS 151 +P+ T++ WD DRL + D R + Y+ +F I + G++ Q + Sbjct: 1277 TRPGFRPKETYFDWDVQDRLVRVSLPDGARWR--YRYDAFGRRIN-KVREGQVPSAQ--A 1331 Query: 152 LADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLT--VEQMQN 209 +A + G+ Q++ + + AD + +W+ G + Q++ Sbjct: 1332 VARVAYRWDGD------------QLIG--QHQYRADGSAAREVQWVYEPGSFRPLAQLEA 1377 Query: 210 QMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLI-- 267 Q D ++H D G L S EG W E WG E P L++ + Sbjct: 1378 QGDST-----QLHYIVTDLTGTARELCSEEGEIRWRGEQGLWGAHREERRPIPLRRYLGD 1432 Query: 268 ----------RLPGQQYDEESGLYYNRHRYYDPLQGRYITQDPIGLKGGWNFYQYPLNPV 317 R GQ YD E+GLYYNRHRYYD G+Y++ DPIGL GG Y Y NP+ Sbjct: 1433 AANEEVYCELRYQGQLYDAETGLYYNRHRYYDAESGQYLSPDPIGLAGGKRAYGYVKNPL 1492 Query: 318 QYIDSMGLASKYGHLNNGGYGARPNKPPTPDPSKLPDI 355 ++D +GL K G NG K + + DI Sbjct: 1493 SWVDPLGLTPKEG--KNGSDKGPDKKNSRAKINNIEDI 1528 >UniRef50_A7FN18 RHS/YD repeat protein n=5 Tax=cellular organisms RepID=A7FN18_YERP3 Length = 1419 Score = 87.0 bits (214), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 50/136 (36%), Positives = 71/136 (52%), Gaps = 12/136 (8%) Query: 221 IHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPH---------QLQQLIRLPG 271 ++ YH D G P + + +G W +Y +G + + + Q +Q +R G Sbjct: 1180 LYWYHTDLNGSPQEVTNAQGEMVWSGQYGVFGQVTRQTDAMWRNVSKPLGQFRQPLRYAG 1239 Query: 272 QQYDEESGLYYNRHRYYDPLQGRYITQDPIGLKGGWNFYQYPLNPVQYIDSMGLA---SK 328 Q D+E+GL+Y +RYY P GR+IT DPIGL GG N YQY NP+ +ID GLA + Sbjct: 1240 QYLDDETGLHYTTYRYYAPEVGRFITPDPIGLAGGLNLYQYAPNPLGWIDPWGLAGSPTT 1299 Query: 329 YGHLNNGGYGARPNKP 344 H+ G A KP Sbjct: 1300 ATHITYQGIDAITGKP 1315 Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 48/144 (33%), Positives = 66/144 (45%), Gaps = 29/144 (20%) Query: 4 DNRIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAE 63 DNR+ R + Y YD G L+E R + RT RY YD +RLV + + Sbjct: 1059 DNRLTRWEQWQYHYDAFGNLSE----------RLEGYRTQRYRYDGDNRLVG-AKGDGQK 1107 Query: 64 PLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKP---QVTWYGWDGDRLTTIQNDRT 120 L E++Y YD LGRR++K V R P Q T + W G RL + D + Sbjct: 1108 GLFEAQYHYDALGRRLSKVV--------------RTPQGNQETHFLWQGLRLLQSRTDES 1153 Query: 121 RIQTIYQPG-SFTPLIRVETATGE 143 + Y P ++TPL +E GE Sbjct: 1154 QQTYCYDPNEAYTPLACIERRYGE 1177 >UniRef50_B2PVY9 Putative uncharacterized protein n=12 Tax=Enterobacteriaceae RepID=B2PVY9_PROST Length = 707 Score = 87.0 bits (214), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 46/125 (36%), Positives = 69/125 (55%), Gaps = 11/125 (8%) Query: 224 YHCDHRGLPLALVSTEGATEWCAEYDEWGNLLN---------EENPHQLQQLIRLPGQQY 274 +HCD PL + + +G T W +Y+ +G + + E +Q +R GQ + Sbjct: 479 HHCDINSAPLDVTNEQGNTVWSGKYERFGFVRSSPLSFYSDPERKMESFEQNLRYAGQYF 538 Query: 275 DEESGLYYNRHRYYDPLQGRYITQDPIGLKGGWNFYQYPLNPVQYIDSMG--LASKYGHL 332 D E+GL++N R+YDP GR+I DPIGL GG N YQY NP+ +ID G + Y + Sbjct: 539 DNETGLHFNTFRFYDPQIGRFIMPDPIGLLGGINLYQYAPNPLGWIDPWGWEIVRVYHYT 598 Query: 333 NNGGY 337 ++ GY Sbjct: 599 SSDGY 603 >UniRef50_UPI00019F181A conserved protein, rhs-like protein n=1 Tax=Citrobacter youngae ATCC 29220 RepID=UPI00019F181A Length = 63 Score = 86.7 bits (213), Expect = 2e-15, Method: Composition-based stats. Identities = 38/62 (61%), Positives = 46/62 (74%) Query: 416 TASDYLPQTNWPTTQLPPGYTCAEPYLFPDINKPDGPATAGIDDLGEILAKMKQRTSRGI 475 T Q +WP +LP GYTCAEPYLFPD N+P GPATAGIDDL E++ K QRT++G+ Sbjct: 2 TVKQMAAQLDWPIDKLPAGYTCAEPYLFPDFNQPGGPATAGIDDLAELVIKGMQRTAKGV 61 Query: 476 RK 477 RK Sbjct: 62 RK 63 >UniRef50_B5H9Z7 Rhs protein n=2 Tax=Streptomyces RepID=B5H9Z7_STRPR Length = 1054 Score = 86.7 bits (213), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 79/262 (30%), Positives = 106/262 (40%), Gaps = 37/262 (14%) Query: 69 RYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDG-DRLTTIQN-DRTRIQTIY 126 RY +D GR V ++ R LSRKP YGWD D L ++ D TR + +Y Sbjct: 611 RYEHDAQGRVVLRQKAR----------LSRKPDTWHYGWDAEDHLVSVTTPDGTRWRYVY 660 Query: 127 QPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRL--ESEI 184 A G QR S D +V D L ++ Sbjct: 661 D------------ALGRRIAKQRLSA----------DATTVAEEVTFTWDGDTLCEQTTS 698 Query: 185 LADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEW 244 L + W V Q++ ++ R+ D G P LV +G W Sbjct: 699 LTGSADSVALTWDHDGVKPVTQVERRLLDRSEVDRRFFAIVTDLVGTPRELVDEQGKVAW 758 Query: 245 CAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEESGLYYNRHRYYDPLQGRYITQDPIGLK 304 WG + L R PGQ +D ESGL+YNRHR+YDP GRY++ DP+GL Sbjct: 759 RTRATLWGTTTWNRSATAYTPL-RFPGQYFDPESGLHYNRHRHYDPESGRYLSPDPLGLV 817 Query: 305 GGWNFYQYPLNPVQYIDSMGLA 326 N Y NP ++ID +GLA Sbjct: 818 PAPNAVTYVDNPTRWIDPLGLA 839 >UniRef50_D2TGW0 Putative Rhs protein n=2 Tax=Citrobacter RepID=D2TGW0_CITRO Length = 1477 Score = 85.9 bits (211), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 45/106 (42%), Positives = 57/106 (53%) Query: 220 KIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEESG 279 ++H D G L++ +G W E WG +R PGQ DEESG Sbjct: 1237 RLHYVITDITGRIQELLTEDGTIVWRGEQQLWGREEGRNRDDAPACRLRFPGQYEDEESG 1296 Query: 280 LYYNRHRYYDPLQGRYITQDPIGLKGGWNFYQYPLNPVQYIDSMGL 325 LYYNR RYYD G+Y+ DP+GL GG N Y Y NP++YID +GL Sbjct: 1297 LYYNRFRYYDCEAGQYLCADPVGLAGGLNPYGYVNNPLKYIDPLGL 1342 Score = 52.4 bits (124), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 47/142 (33%), Positives = 66/142 (46%), Gaps = 31/142 (21%) Query: 6 RIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPL 65 R+ RD ++YD +GRL EK + + R T RY +D++ +L T P Sbjct: 1115 RVIRDERTTWKYDVNGRLVEKR--VGKSGYR---PLTWRYRWDARSQL-----TGLETPE 1164 Query: 66 VES-RYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTT--------IQ 116 E Y YDP GRR++KR R++ G + W+GD+LT Sbjct: 1165 GERWEYKYDPFGRRISKRCINRDKPGAG------------FHWNGDQLTEEIPAGTEGKP 1212 Query: 117 NDRTRIQTIYQPGSFTPLIRVE 138 R I+ IY+PGSF PL R E Sbjct: 1213 EYRNAIRWIYEPGSFPPLARYE 1234 >UniRef50_B3PEN8 Rhsfamily protein n=2 Tax=Cellvibrio japonicus Ueda107 RepID=B3PEN8_CELJU Length = 1401 Score = 85.9 bits (211), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 47/117 (40%), Positives = 65/117 (55%), Gaps = 5/117 (4%) Query: 212 DPVY--TPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRL 269 DP++ T A +++ YH DH G P ++ G W A+Y +G ++ +R Sbjct: 1163 DPLFQRTAAGEVYYYHNDHLGTPQQMLDDAGNIVWEAQYSAFGKA--HITIDTVENNLRF 1220 Query: 270 PGQQYDEESGLYYNRHRYYDPLQGRYITQDPIGLKGGWNFYQYPL-NPVQYIDSMGL 325 PGQ +D E+GL++N R YD GRYI DPIGL GG+N Y Y NP ID +GL Sbjct: 1221 PGQYFDSETGLHHNYFRDYDSALGRYIQSDPIGLGGGFNTYVYAYQNPAVLIDPLGL 1277 >UniRef50_B7H4M5 Uncharacterized protein ybfO n=3 Tax=Acinetobacter baumannii RepID=B7H4M5_ACIB3 Length = 229 Score = 85.9 bits (211), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 43/94 (45%), Positives = 55/94 (58%), Gaps = 7/94 (7%) Query: 240 GATEWCAEYDEWGNLLNE-------ENPHQLQQLIRLPGQQYDEESGLYYNRHRYYDPLQ 292 G W A+Y WG E EN + IR GQ +D E+GL+YNR+ YY P Sbjct: 6 GVVIWKAQYKAWGECKVEQAKSDFFENSEIISNNIRFQGQYFDGETGLHYNRYCYYSPYV 65 Query: 293 GRYITQDPIGLKGGWNFYQYPLNPVQYIDSMGLA 326 GR+I++DPIGL GG N Y Y NPV ++D +GLA Sbjct: 66 GRFISKDPIGLLGGSNIYAYAPNPVGWVDQLGLA 99 >UniRef50_Q2SPP3 Rhs family protein n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SPP3_HAHCH Length = 265 Score = 85.9 bits (211), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 38/62 (61%), Positives = 45/62 (72%) Query: 267 IRLPGQQYDEESGLYYNRHRYYDPLQGRYITQDPIGLKGGWNFYQYPLNPVQYIDSMGLA 326 +R GQ YDEE+G +YNRHRYYDP GR+I Q PIGL GG N YQY NPV ++D GL Sbjct: 20 LRFQGQYYDEETGFHYNRHRYYDPQSGRFINQAPIGLLGGANAYQYAPNPVGWVDPFGLT 79 Query: 327 SK 328 +K Sbjct: 80 AK 81 >UniRef50_B4ETQ7 Putative Rhs-family protein n=3 Tax=Enterobacteriaceae RepID=B4ETQ7_PROMH Length = 380 Score = 85.5 bits (210), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 46/116 (39%), Positives = 59/116 (50%), Gaps = 8/116 (6%) Query: 220 KIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNL--------LNEENPHQLQQLIRLPG 271 K+H DH+G P + G W + WG + E +P+ + R G Sbjct: 153 KLHYVVTDHQGTPREIFCEGGQASWAGRLNTWGQMQFWRYRDGKAENDPNYTECPFRFAG 212 Query: 272 QQYDEESGLYYNRHRYYDPLQGRYITQDPIGLKGGWNFYQYPLNPVQYIDSMGLAS 327 Q DEESGLYYNR RYYD G+Y++ DPIGL GG N Y Y P ++D GLA Sbjct: 213 QYEDEESGLYYNRFRYYDRETGQYLSPDPIGLLGGLNPYGYVHCPTGWVDPFGLAC 268 >UniRef50_UPI000196E06E Rhs family protein n=2 Tax=Neisseria mucosa ATCC 25996 RepID=UPI000196E06E Length = 280 Score = 85.5 bits (210), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 43/103 (41%), Positives = 57/103 (55%), Gaps = 1/103 (0%) Query: 224 YHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQ-LQQLIRLPGQQYDEESGLYY 282 +H D G+P + G W EY WG L +E ++ Q RL Q YDEE+GL+Y Sbjct: 40 FHTDQIGIPREMTDIHGNLLWYGEYTAWGRLKKDECVYRNAHQPFRLQNQYYDEETGLHY 99 Query: 283 NRHRYYDPLQGRYITQDPIGLKGGWNFYQYPLNPVQYIDSMGL 325 N RYY+P GR++ QDPI L GG N Y + N + D +GL Sbjct: 100 NLMRYYEPEAGRFVNQDPILLLGGSNLYSFASNTNAWFDPLGL 142 >UniRef50_Q395C2 Rhs family protein n=1 Tax=Burkholderia sp. 383 RepID=Q395C2_BURS3 Length = 190 Score = 85.1 bits (209), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 42/67 (62%), Positives = 45/67 (67%) Query: 261 HQLQQLIRLPGQQYDEESGLYYNRHRYYDPLQGRYITQDPIGLKGGWNFYQYPLNPVQYI 320 H + IR PGQ YD ESGL+YNR RY DP GRYI QDPIGLKGG N Y Y NPV Sbjct: 7 HAVDNPIRFPGQYYDRESGLHYNRFRYCDPQVGRYINQDPIGLKGGANSYVYAHNPVTLS 66 Query: 321 DSMGLAS 327 D +GL S Sbjct: 67 DPLGLQS 73 >UniRef50_C7MXD3 Rhs family protein n=1 Tax=Saccharomonospora viridis DSM 43017 RepID=C7MXD3_SACVD Length = 1485 Score = 85.1 bits (209), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 101/370 (27%), Positives = 152/370 (41%), Gaps = 64/370 (17%) Query: 4 DNRIARDAHYLYRYDRHGRLTEKTDLIPEGV------IRTDDERTHRYHYDSQHRLVHYT 57 + R+ A ++DR+GRL +++ I +G R +R++RY D + V T Sbjct: 1018 ERRLDNGATIAQQWDRNGRLIDQSISIADGTPTVPPRYRLLQQRSYRYGPDGSPQAVDDT 1077 Query: 58 RT--------------QYAEPLVESRYLYDPLGR-RVAKRVWRRERDLTGWMSLSRKPQV 102 T Q A P + +Y YD G R A W + S Q Sbjct: 1078 STGTVRLQLDGTGRVRQVAGPGGQEQYSYDRAGNIRNAS-----------WHTPSGHGQH 1126 Query: 103 TWYGWDGDRLTTIQN--------DRTRIQTIYQPGSFT-----------PLIRVETATGE 143 + Y +DG RLTT N R + Y+ G T L+ V T G Sbjct: 1127 S-YAYDGTRLTTAGNVRYTYDRQGRVVTKVRYEAGGTTLRWHYTWNAEDRLVEVGTPDG- 1184 Query: 144 LAKTQRRSLADTLQQSGGE-----DGGSVVFPPVLVQMLDRLESEILADRVSEESRRWLA 198 ++ R L D L + + DG +VV + RL ++LA V + W Sbjct: 1185 ---SRWRYLYDALGRRIAKHKLAPDGSTVVERTEFIWDGVRLAEQVLAG-VDATTWEWHP 1240 Query: 199 SCGLTVEQMQNQMDPVYT-PARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNE 257 + Q++ ++ P H D G L+ G W WG + + Sbjct: 1241 RRFRPLTQIRRRLSPAKQWVGGDFHAVITDGIGTSTELLDGSGNLAWRNRTTLWGKTVIK 1300 Query: 258 ENPHQLQQLIRLPGQQYDEESGLYYNRHRYYDPLQGRYITQDPIGLKGGWNFYQYPLNPV 317 + R PGQ D E+GL+YN HRYYDP GRY++ DP+GL+ N Y Y +NP+ Sbjct: 1301 HHG-SASTPWRFPGQYSDPETGLHYNYHRYYDPDTGRYVSCDPLGLRPSPNHYAYVVNPL 1359 Query: 318 QYIDSMGLAS 327 +++D +GL S Sbjct: 1360 RWLDPLGLMS 1369 >UniRef50_C7Q0A7 YD repeat protein n=2 Tax=Catenulispora acidiphila DSM 44928 RepID=C7Q0A7_CATAD Length = 1528 Score = 84.7 bits (208), Expect = 6e-15, Method: Compositional matrix adjust. Identities = 93/329 (28%), Positives = 128/329 (38%), Gaps = 98/329 (29%) Query: 7 IARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTH--RYHYDSQHRLVHYTRTQYAEP 64 I R A Y +D+ GRLT V RT D R+ +Y +DS+ RLVH + Sbjct: 1156 IRRSARARYEHDQAGRLTRS-------VRRTLDGRSKVTQYVWDSEDRLVHVITPENGT- 1207 Query: 65 LVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLT--TIQNDRTRI 122 Y YDPLGRR AK + + + +VT+ WDG RL ++Q + Sbjct: 1208 ---WHYSYDPLGRRTAKTRFADDGTVV--------DRVTFL-WDGPRLAEQSVQGPESFT 1255 Query: 123 QTI---YQPGSFTPLIRVETATGELAKTQRR--SLADTLQQSGGEDGGSVVFPPVLVQML 177 T+ Y PG+F P TQRR L D Q ++ Sbjct: 1256 VTLTWDYDPGTFRP------------ATQRRRNRLGDADQ-----------------TVI 1286 Query: 178 DRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVS 237 D I+AD V G P LV+ Sbjct: 1287 DEAFHAIVADLV----------------------------------------GSPTELVT 1306 Query: 238 TEGATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEESGLYYNRHRYYDPLQGRYIT 297 +G W WG + + +R PGQ +D+ESGL+YN +RYYD Y+T Sbjct: 1307 PDGRVVWHTTTSLWGRTIGTSAESGVDCPLRFPGQYHDDESGLHYNLNRYYDSETAAYLT 1366 Query: 298 QDPIGLKGGWNFYQYPLNPVQYIDSMGLA 326 DP+GL N + Y NP+ D +GL+ Sbjct: 1367 PDPLGLVPAPNDHAYVPNPLTVSDPLGLS 1395 >UniRef50_A1TSG3 RHS protein n=1 Tax=Acidovorax citrulli AAC00-1 RepID=A1TSG3_ACIAC Length = 384 Score = 84.7 bits (208), Expect = 7e-15, Method: Compositional matrix adjust. Identities = 52/165 (31%), Positives = 73/165 (44%), Gaps = 35/165 (21%) Query: 195 RWLASCGLTVEQMQN-----------QMDPVYTPARKIHLYHCDHRGLPLALVSTEGATE 243 RWLA+ G Q + P+ +I+ +H GLP + +G Sbjct: 88 RWLAALGARETSAQGAKPEPPDREPPPANDSSQPSARIYYFHLQPNGLPEEMSDRDGHLA 147 Query: 244 WCAEYDEWGNLLNEE------------------------NPHQLQQLIRLPGQQYDEESG 279 W A+Y WG+ + EE + + Q +R+ GQ D E+G Sbjct: 148 WRAQYRVWGSAVAEEWQAFDGVGRPVEAPRHETGQRPDNSAAPMPQNLRMQGQYLDRETG 207 Query: 280 LYYNRHRYYDPLQGRYITQDPIGLKGGWNFYQYPLNPVQYIDSMG 324 L+YN RYY P G + T DPIGL GG N +QY NPV +ID +G Sbjct: 208 LHYNTFRYYGPDVGAFTTPDPIGLAGGVNLHQYAPNPVSWIDPLG 252 >UniRef50_B2HAQ4 RhsD protein n=4 Tax=Burkholderia RepID=B2HAQ4_BURPS Length = 1531 Score = 84.7 bits (208), Expect = 7e-15, Method: Compositional matrix adjust. Identities = 48/119 (40%), Positives = 64/119 (53%), Gaps = 10/119 (8%) Query: 220 KIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNL--LNEE--NPHQLQQLIRLPGQQYD 275 +I Y D G P + + G W YDE G L +N + NP I L GQ D Sbjct: 1276 RIFYYRYDANGRPTQMTDSSGREVWATGYDENGRLVPINADIYNP------IHLQGQYRD 1329 Query: 276 EESGLYYNRHRYYDPLQGRYITQDPIGLKGGWNFYQYPLNPVQYIDSMGLASKYGHLNN 334 E+GL+YNRHRYYDP G +I++DP+GL G N Y+Y N + + D +G +K NN Sbjct: 1330 AETGLHYNRHRYYDPALGSFISKDPLGLAAGVNLYRYAPNSIGWADPLGFQAKPSPNNN 1388 >UniRef50_Q399U9 Rhs family protein n=3 Tax=Proteobacteria RepID=Q399U9_BURS3 Length = 1446 Score = 84.3 bits (207), Expect = 8e-15, Method: Compositional matrix adjust. Identities = 59/173 (34%), Positives = 75/173 (43%), Gaps = 27/173 (15%) Query: 179 RLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARK----IHLYHCDHRGLPLA 234 RL E DR EE+ +L V + V ++ +H D GLP Sbjct: 1141 RLVQETYHDRQGEEALTYLYESNSYVPLARIDQGKVAANDANARDAVYYFHNDVSGLPEE 1200 Query: 235 LVSTEGATEWCAEYDEWGNLLNEE-------------NPHQLQ----------QLIRLPG 271 L + EG W A Y WGN + EE QL Q +R G Sbjct: 1201 LTNAEGELIWQARYKVWGNAVQEEWIARTSQQSVPEWGEVQLASATPAHVPRPQNLRFQG 1260 Query: 272 QQYDEESGLYYNRHRYYDPLQGRYITQDPIGLKGGWNFYQYPLNPVQYIDSMG 324 Q D E+GL+YN R+YDP GR+I DPIGL GG N Y Y +P+ +ID G Sbjct: 1261 QYLDRETGLHYNTFRFYDPDIGRFINPDPIGLSGGHNLYAYAESPLIWIDPWG 1313 >UniRef50_A9FBU5 Conserved carbohydrate-binding protein, Rhs family n=2 Tax=Proteobacteria RepID=A9FBU5_SORC5 Length = 1300 Score = 84.3 bits (207), Expect = 9e-15, Method: Compositional matrix adjust. Identities = 55/154 (35%), Positives = 73/154 (47%), Gaps = 19/154 (12%) Query: 224 YHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEESGLYYN 283 Y D G P LV +G D WG+ + E Q +R GQ DEE+GL YN Sbjct: 1056 YLTDDSGAPEMLVGPDGQIGCELARDPWGSATSAEGA-QTSTPLRFRGQYADEETGLSYN 1114 Query: 284 RHRYYDPLQGRYITQDPIGLKGGWNFYQYPLN-PVQYIDSMGLASKY-----------GH 331 R+RYYDP GRYI+ DP+G++GG N + Y N P +D GL GH Sbjct: 1115 RYRYYDPELGRYISADPLGIEGGLNVFAYAANCPTSAVDVEGLMYSIIKDRAGNIVADGH 1174 Query: 332 LNNGG------YGARPNKPPTPDPSKLPDIAKQL 359 + G + A PN P + S L ++A +L Sbjct: 1175 SQDTGRPLPASHSAVPNGKPCAERSALTNLAHRL 1208 >UniRef50_D1YPP7 RHS repeat-associated core domain protein n=1 Tax=Veillonella parvula ATCC 17745 RepID=D1YPP7_9FIRM Length = 237 Score = 84.0 bits (206), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 41/107 (38%), Positives = 56/107 (52%), Gaps = 1/107 (0%) Query: 219 RKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEEN-PHQLQQLIRLPGQQYDEE 277 ++ H +HC+ G+P + EG W EY W L Q RL Q D E Sbjct: 10 QQTHYFHCNQIGIPREMTDKEGNLFWYVEYTIWARLKEATKVTDSAHQPFRLQNQYADRE 69 Query: 278 SGLYYNRHRYYDPLQGRYITQDPIGLKGGWNFYQYPLNPVQYIDSMG 324 +GL+YN RYY+P GR++ QDPIGL G N YQ+ N ++D +G Sbjct: 70 TGLHYNLMRYYEPEAGRFVNQDPIGLWGEENLYQFAPNATMWLDPLG 116 >UniRef50_C0EPY1 Putative uncharacterized protein n=7 Tax=Neisseria RepID=C0EPY1_NEIFL Length = 434 Score = 83.2 bits (204), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 44/109 (40%), Positives = 59/109 (54%), Gaps = 1/109 (0%) Query: 218 ARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQ-LQQLIRLPGQQYDE 276 A+ + +H D G+P + G W EY WG L + +Q Q RL Q YD Sbjct: 206 AQYLAYFHNDQIGIPREMTDIRGNLLWYGEYTAWGRLKKDGRVYQHAHQPFRLQNQYYDR 265 Query: 277 ESGLYYNRHRYYDPLQGRYITQDPIGLKGGWNFYQYPLNPVQYIDSMGL 325 E+GL+YN RYY+P GR+I+QDPIGL G N Y + N ++D GL Sbjct: 266 ETGLHYNYFRYYEPETGRFISQDPIGLLGEDNLYWFGPNTAIWVDLFGL 314 >UniRef50_A9C2K3 YD repeat protein n=1 Tax=Delftia acidovorans SPH-1 RepID=A9C2K3_DELAS Length = 1301 Score = 82.8 bits (203), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 56/184 (30%), Positives = 84/184 (45%), Gaps = 34/184 (18%) Query: 171 PVLVQML---DRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPAR-------- 219 P +Q L D + S +L ++ S A G + + +Y P Sbjct: 992 PATLQTLYAEDGIGSTVLGQYANQRSANSAAPAG-----QSDSTEIIYLPTASGPMPIAA 1046 Query: 220 ----KIHLYHCDHRGLPLALVSTEGATEW---CAEYDE---------WGNLLNEENPHQL 263 +++ H DH P L + +G W + + E +G ++ + Q Sbjct: 1047 EINGRLYAIHTDHLNTPRRLTNQQGQVAWQWLISGFGEVRPTTGDRGYGQTVSGPSYAQA 1106 Query: 264 QQL-IRLPGQQYDEESGLYYNRHRYYDPLQGRYITQDPIGLKGGWNFYQY-PLNPVQYID 321 + +R PGQ +DEE+GL YN HRYYD GRYI DPIGL GGWN + Y NP+ ++D Sbjct: 1107 VKFDLRYPGQVFDEETGLSYNLHRYYDAATGRYIQADPIGLAGGWNRFGYVGENPLSFVD 1166 Query: 322 SMGL 325 +GL Sbjct: 1167 PLGL 1170 >UniRef50_Q2T5B9 YD repeat protein n=39 Tax=Proteobacteria RepID=Q2T5B9_BURTA Length = 1553 Score = 82.8 bits (203), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 44/121 (36%), Positives = 60/121 (49%), Gaps = 21/121 (17%) Query: 226 CDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIR----------------- 268 CD G P L S++G W A WG+ ++ L+ +R Sbjct: 1280 CDPNGAPHTLYSSDGRALWRARRTAWGDTAGDDGRDSLRSAVREQLRLGHRDSDEFDPPD 1339 Query: 269 ----LPGQQYDEESGLYYNRHRYYDPLQGRYITQDPIGLKGGWNFYQYPLNPVQYIDSMG 324 PGQ DEESGL+YN HRYYDP G+Y++ DP+GL GG + Y +P+Q+ D G Sbjct: 1340 CELRFPGQWADEESGLHYNLHRYYDPSTGQYLSADPVGLAGGLRTHAYVHDPMQWGDPFG 1399 Query: 325 L 325 L Sbjct: 1400 L 1400 >UniRef50_C6CNW6 YD repeat protein n=8 Tax=Enterobacteriaceae RepID=C6CNW6_DICZE Length = 1679 Score = 82.0 bits (201), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 92/332 (27%), Positives = 133/332 (40%), Gaps = 64/332 (19%) Query: 14 LYRYDRHGRLTEKTDLIPEGVIRTDDERT---HRYHYDSQHRLVHYTRTQYAEPLVESRY 70 L+ YD L E + + P+G R YD+ R+V +SRY Sbjct: 1276 LFGYDSEQNLCEVSAIEPDGAGRLSASNAVVQASSGYDTAGRVVMRG---------DSRY 1326 Query: 71 LYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDG-DRLTTIQN-DRTRIQTIYQP 128 YD GR V+KR R +P+ T +GWD DRL + D +R + Y Sbjct: 1327 QYDACGRLVSKRESR----------AGFRPRDTQFGWDAQDRLVRVSLPDGSRWRYGYD- 1375 Query: 129 GSFTPLI-RVETATGELAKTQRRSLA--DTLQQSGGEDGGSVVFPPVLVQMLDRLESEIL 185 +F + +V G A+ R D Q SG +++ Sbjct: 1376 -AFGRRVSKVREGQGPSAQAVARVAYRWDGDQLSG--------------------QTQYR 1414 Query: 186 ADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWC 245 AD + +W+ G Q + T ++H D G L S G W Sbjct: 1415 ADGSVARAVQWVYEPGSFRPLAQVEEKGGRT---QLHYIVTDLTGTARELCSETGEVHWR 1471 Query: 246 AEYDEWGNLLNEENPHQLQQLI------------RLPGQQYDEESGLYYNRHRYYDPLQG 293 E WG E+ P L++ + R GQ YD E+GLYYNRHRYYDP Sbjct: 1472 GEQALWGAHREEKIPIPLRRWLGDAANEEVYCELRYQGQVYDSETGLYYNRHRYYDPETA 1531 Query: 294 RYITQDPIGLKGGWNFYQYPLNPVQYIDSMGL 325 +Y++ DP+G+ GG Y NP++++D GL Sbjct: 1532 QYLSGDPLGIAGGLRPQGYVHNPMEWVDPFGL 1563 >UniRef50_D0KZB0 YD repeat protein n=1 Tax=Halothiobacillus neapolitanus c2 RepID=D0KZB0_HALNC Length = 1467 Score = 82.0 bits (201), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 44/107 (41%), Positives = 57/107 (53%), Gaps = 1/107 (0%) Query: 220 KIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEESG 279 I+ H D G P + T W D +G+ + ++ +R PGQ YD E+G Sbjct: 1177 AIYYLHTDAMGTPRLATNANQQTVWRWNRDAFGDRQVNASSASIEMNLRYPGQYYDTETG 1236 Query: 280 LYYNRHRYYDPLQGRYITQDPIGLKGGWNFYQY-PLNPVQYIDSMGL 325 L+YN +RYYDP GRY T DPIGL GG N + Y NP+ ID GL Sbjct: 1237 LFYNWNRYYDPSTGRYATSDPIGLSGGVNTFGYVSANPLALIDPWGL 1283 >UniRef50_D0BWK2 YD repeat protein n=1 Tax=Acinetobacter sp. RUH2624 RepID=D0BWK2_9GAMM Length = 1361 Score = 82.0 bits (201), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 83/333 (24%), Positives = 129/333 (38%), Gaps = 61/333 (18%) Query: 15 YRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYLYDP 74 Y +DR R+ I+ ++ + YD + RL+ +R+ A + Y YD Sbjct: 847 YSFDRDNRIIS---------IKRNNNLNDNFSYDQEGRLLTESRSNDASSIYAITYTYDK 897 Query: 75 LGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQPGSFTPL 134 G R++ R L V Y + G++LTT+ + T QP ++T Sbjct: 898 NGNRLSLRASGTH--------LQPAANVD-YAYTGNKLTTLTKNGTA-----QPLNYTA- 942 Query: 135 IRVETATGEL---------------AKTQRRSLADTLQQSGGEDGGSVVFPPVLVQML-- 177 E GE+ + T R ++ G + + VQ + Sbjct: 943 -NAELYMGEILPSYDYAGRRRGEGTSTTINRYMSYNANNERTLSGSTSAWSNTAVQFIYD 1001 Query: 178 --DRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHC--DHRGLPL 233 L E A + WL + VY +Y+ D + P Sbjct: 1002 EKSHLIGEYTATGIPLVEYIWLG---------DKPVAAVYESGATTKIYYIVTDVQNTPR 1052 Query: 234 ALVSTEGATEWCAEYDEWGNLLNEENPHQLQQL-IRLPGQQYDEESGLYYNRHRYYDPLQ 292 L+ + G+ W + +G +P +R PGQ YD +G +YN +R+Y+P Sbjct: 1053 RLIDSNGSVVWSWDSTAFG----LGSPVSTITFNLRFPGQYYDATTGQFYNHNRFYNPEL 1108 Query: 293 GRYITQDPIGLKGGWNFYQYPL-NPVQYIDSMG 324 GRY+ DPIGL GG N Y Y L NPV Y+D G Sbjct: 1109 GRYMEPDPIGLAGGLNPYIYALNNPVMYVDMTG 1141 >UniRef50_Q7N2G0 Complete genome; segment 11/17 n=4 Tax=Gammaproteobacteria RepID=Q7N2G0_PHOLL Length = 1498 Score = 81.3 bits (199), Expect = 7e-14, Method: Compositional matrix adjust. Identities = 45/115 (39%), Positives = 61/115 (53%), Gaps = 7/115 (6%) Query: 220 KIHLYHC--DHRGLPLALVSTEGATEWCAEYDEWGN-----LLNEENPHQLQQLIRLPGQ 272 K LY+ DH+G +++ G W WG +L +P L R GQ Sbjct: 1272 KGQLYYVVSDHQGTVREILTEAGELIWAGRLLTWGEPECWPVLTVNDPRNLTCNFRFAGQ 1331 Query: 273 QYDEESGLYYNRHRYYDPLQGRYITQDPIGLKGGWNFYQYPLNPVQYIDSMGLAS 327 D ESGL+YNRHRYY+ G+Y++ DP+ L GG N Y Y +PV +ID GLA+ Sbjct: 1332 YEDRESGLFYNRHRYYESDTGQYLSPDPLNLSGGVNPYGYVHDPVNWIDPFGLAA 1386 Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 50/149 (33%), Positives = 66/149 (44%), Gaps = 34/149 (22%) Query: 5 NRIARDAHYLYRYDRHGRLTEKTD----LIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQ 60 R+ + YRYD +GR TEKT+ P RT RY +D+ RL + + Sbjct: 1142 GRVIQHGACTYRYDENGRRTEKTERRWGYRP---------RTWRYRWDAHDRLTGFISPE 1192 Query: 61 YAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTW---YGWDGDRL---TT 114 V RY YD GRR+ K R+E D G KP Y W G++L T Sbjct: 1193 G----VRWRYCYDAFGRRIGK---RQEVDAAG---PPVKPTAIIGYDYLWSGEQLIEETP 1242 Query: 115 IQNDRT-----RIQTIYQPGSFTPLIRVE 138 + D T I +Y+PG+ TPL R E Sbjct: 1243 VYADGTVDYEQSIHWLYEPGALTPLARFE 1271 >UniRef50_B2PW78 Putative uncharacterized protein n=1 Tax=Providencia stuartii ATCC 25827 RepID=B2PW78_PROST Length = 330 Score = 81.3 bits (199), Expect = 8e-14, Method: Compositional matrix adjust. Identities = 40/111 (36%), Positives = 62/111 (55%), Gaps = 9/111 (8%) Query: 232 PLALVSTEGATEWCAEYDEWGNLLN---------EENPHQLQQLIRLPGQQYDEESGLYY 282 PL + + +G T W +Y+ +G + + + +Q +R GQ +D E+GL++ Sbjct: 117 PLDVTNEQGNTVWSGKYERFGFVRSSPLSFYSDPDRKMESFEQNLRYAGQYFDNETGLHF 176 Query: 283 NRHRYYDPLQGRYITQDPIGLKGGWNFYQYPLNPVQYIDSMGLASKYGHLN 333 N R+YDP GR+I DPIGL GG N Y Y NP+ ++D GL + Y +N Sbjct: 177 NTFRFYDPQIGRFIMPDPIGLLGGMNLYAYAPNPMSWVDPFGLMTLYRGMN 227 >UniRef50_A9AKU8 Type VI secretion system Vgr family protein n=10 Tax=Burkholderia RepID=A9AKU8_BURM1 Length = 1981 Score = 81.3 bits (199), Expect = 8e-14, Method: Compositional matrix adjust. Identities = 44/94 (46%), Positives = 50/94 (53%), Gaps = 11/94 (11%) Query: 224 YHCDHRGLPLALVSTEGATEWCAEYDEWGNLLN-----EENPHQLQQLIRLPGQQYDEES 278 Y DH G P L + W A+ +G +NP IR PGQ DEES Sbjct: 1736 YVTDHLGTPQELYDEQREVLWAADLSAYGRTARWLTRVVDNP------IRFPGQYRDEES 1789 Query: 279 GLYYNRHRYYDPLQGRYITQDPIGLKGGWNFYQY 312 GL+YNR RYYDP+ GRYI QDPI GG NFY Y Sbjct: 1790 GLHYNRFRYYDPMVGRYINQDPIAFDGGINFYSY 1823 >UniRef50_Q2SIG5 Rhs family protein n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SIG5_HAHCH Length = 1427 Score = 80.9 bits (198), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 47/126 (37%), Positives = 68/126 (53%), Gaps = 7/126 (5%) Query: 217 PARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQYDE 276 + Y DH G P + S G W A Y+ +G + + + + +R PGQ +D+ Sbjct: 1148 AGENTYYYQNDHLGAPRQMASRNGQIVWKAAYEVFGRV--KIFVDKAENNLRFPGQYFDQ 1205 Query: 277 ESGLYYNRHRYYDPLQGRYITQDPIGLKGGWNFYQYPL-NPVQYIDSMGLASKYGHLNNG 335 ESG+++N R Y+P GRYI +DPI + GG N Y Y NPV Y+D +GLA +N G Sbjct: 1206 ESGMHHNYFRDYNPGYGRYIQRDPISVYGGINVYAYANGNPVVYMDPLGLAK----MNVG 1261 Query: 336 GYGARP 341 G+ P Sbjct: 1262 VGGSVP 1267 >UniRef50_D1JME6 Rhs family protein n=22 Tax=Bacteroides RepID=D1JME6_9BACE Length = 1494 Score = 80.5 bits (197), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 52/136 (38%), Positives = 68/136 (50%), Gaps = 10/136 (7%) Query: 227 DHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEESGLYYNRHR 286 D G P TEG W D GN++ E + + GQ YD E+GL YNR R Sbjct: 1256 DQLGTPTEAYDTEGNEVWSRVLDMDGNVIEETGNKGMVPFL-FQGQYYDRETGLAYNRFR 1314 Query: 287 YYDPLQGRYITQDPIGLKGG-WNFYQYPLNPVQYIDSMGLASKYGHLNNGG---YGARPN 342 YY P G Y++QDPIGL GG N Y Y + +IDS GL Y +N+ G Y R + Sbjct: 1315 YYSPKMGVYVSQDPIGLGGGILNLYGYVDDTNVWIDSFGLDWNYVLINSKGNVFYSGRAS 1374 Query: 343 KPPTPDPSKLPDIAKQ 358 D + L D+A++ Sbjct: 1375 -----DNANLSDVARR 1385 >UniRef50_A4SKJ3 Rhs family protein n=2 Tax=Bacteria RepID=A4SKJ3_AERS4 Length = 1590 Score = 80.5 bits (197), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 45/122 (36%), Positives = 62/122 (50%), Gaps = 12/122 (9%) Query: 220 KIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLI------------ 267 ++H D G L S G W E WGN + P L++ + Sbjct: 1338 RLHYIVTDVAGTARELCSEAGDIIWRGEQRLWGNYRADAIPQPLRRFLGDAANEETYCEL 1397 Query: 268 RLPGQQYDEESGLYYNRHRYYDPLQGRYITQDPIGLKGGWNFYQYPLNPVQYIDSMGLAS 327 R GQ YD+E+GLYYNRHRY+DP G+YI+ DPIG GG Y NP++++D +GL Sbjct: 1398 RYQGQIYDQETGLYYNRHRYFDPELGQYISPDPIGFAGGVRPQGYVHNPLEWVDPLGLKG 1457 Query: 328 KY 329 + Sbjct: 1458 FF 1459 Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 40/132 (30%), Positives = 62/132 (46%), Gaps = 22/132 (16%) Query: 15 YRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYLYDP 74 YRYD+ GRL++K ++ R + +D R++ +++ RY YDP Sbjct: 1218 YRYDKCGRLSDK--VVSRPGFRPQTTQFEWDGFDRLQRVILPDGSRW-------RYRYDP 1268 Query: 75 LGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRT------RIQTIYQP 128 GRR+ K + LT S+ Y WDGD+L Q+ R ++Q +Y+P Sbjct: 1269 FGRRIGKEREGQVSQLTAITSVH-------YRWDGDQLVQQQSYRADGNTARQVQWVYEP 1321 Query: 129 GSFTPLIRVETA 140 GSF PL + E Sbjct: 1322 GSFRPLAQWEVG 1333 >UniRef50_C0EPY5 Putative uncharacterized protein n=1 Tax=Neisseria flavescens NRL30031/H210 RepID=C0EPY5_NEIFL Length = 193 Score = 80.5 bits (197), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 42/96 (43%), Positives = 54/96 (56%), Gaps = 1/96 (1%) Query: 235 LVSTEGATEWCAEYDEWGNLLNEENPHQ-LQQLIRLPGQQYDEESGLYYNRHRYYDPLQG 293 + G W EY WG L +E ++ Q RL Q YD E+GL+YN RYYD G Sbjct: 1 MTDIHGNLLWYGEYTAWGRLKKDERVYKDAHQPFRLQNQYYDSETGLHYNYFRYYDSETG 60 Query: 294 RYITQDPIGLKGGWNFYQYPLNPVQYIDSMGLASKY 329 R+++QD IGL GG NFYQ+ N +ID +GL Y Sbjct: 61 RFVSQDVIGLVGGENFYQFSPNTQSWIDPLGLKELY 96 >UniRef50_C4NV50 Rhs repeat family protein n=10 Tax=Gammaproteobacteria RepID=C4NV50_ECOLX Length = 1374 Score = 80.5 bits (197), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 54/155 (34%), Positives = 72/155 (46%), Gaps = 24/155 (15%) Query: 173 LVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLP 232 L++ LD ++LA+ + WL L Q + + + H DH G P Sbjct: 1070 LIEELDAATGDVLAEYI------WLDGTPLGFVQ-----------SGQTYQVHVDHLGTP 1112 Query: 233 LALVSTEGATEWCAEYDEWG--NLLNEENPHQLQQLIRLPGQQYDEESGLYYNRHRYYDP 290 AL G W A Y +G +++ + L R PGQ YD E+G +YN RYYDP Sbjct: 1113 KALTDVSGQVVWKASYSPFGKASIIIQGPTFNL----RFPGQYYDAETGFHYNWRRYYDP 1168 Query: 291 LQGRYITQDPIGLKGGWNFYQYPL-NPVQYIDSMG 324 GRYIT DP+GL G N Y Y NP+ D G Sbjct: 1169 ATGRYITSDPLGLIDGVNTYGYVHGNPMSNTDPTG 1203 >UniRef50_A1WE65 Rhs family protein-like protein n=1 Tax=Verminephrobacter eiseniae EF01-2 RepID=A1WE65_VEREI Length = 303 Score = 79.7 bits (195), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 44/111 (39%), Positives = 59/111 (53%), Gaps = 6/111 (5%) Query: 221 IHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNL-----LNEENPHQLQQLIRLPGQQYD 275 + YH +H +PL G W A Y+ +G + ++ +RLPGQ D Sbjct: 66 VAYYHGNHLEVPLQATDNAGNVVWAANYNAFGRADVVTPRSATGDSRINSQLRLPGQYED 125 Query: 276 EESGLYYNRHRYYDPLQGRYITQDPIGLKGGWNFYQYPL-NPVQYIDSMGL 325 E+GL+YN HRYYD GRY DPIGL+GG N Y Y NP+ + D +GL Sbjct: 126 VETGLHYNFHRYYDLDIGRYSQIDPIGLRGGLNGYVYVNGNPLSFTDPLGL 176 >UniRef50_C7QG23 YD repeat protein n=2 Tax=Catenulispora acidiphila DSM 44928 RepID=C7QG23_CATAD Length = 1528 Score = 79.3 bits (194), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 45/137 (32%), Positives = 67/137 (48%), Gaps = 12/137 (8%) Query: 189 VSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWCAEY 248 V++ R W A + Q +D + H D G P LV+ +G+ +W Sbjct: 1234 VAQRRRSWAA------DAPQEAIDEAF------HTIVTDLVGTPTELVAPDGSIDWYTTT 1281 Query: 249 DEWGNLLNEENPHQLQQLIRLPGQQYDEESGLYYNRHRYYDPLQGRYITQDPIGLKGGWN 308 +G + + H +R PGQ D+E+GL+YN HRYYDP +G Y++ DP+GL N Sbjct: 1282 SLYGTTIATSSDHGADCPLRFPGQFRDDETGLHYNVHRYYDPERGSYLSPDPLGLAAAPN 1341 Query: 309 FYQYPLNPVQYIDSMGL 325 Y NP+ D +GL Sbjct: 1342 DQAYVANPMVSADPLGL 1358 >UniRef50_D1S833 YD repeat protein n=1 Tax=Micromonospora aurantiaca ATCC 27029 RepID=D1S833_9ACTO Length = 3829 Score = 79.3 bits (194), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 42/102 (41%), Positives = 52/102 (50%), Gaps = 5/102 (4%) Query: 226 CDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEESGLYYNRH 285 D G P LV G W + D WG + + PGQ D E+GL+YNR Sbjct: 2478 TDTIGTPTHLVEPGGGLRWWSRGDLWGR-----GADRTATPLAFPGQYVDAETGLHYNRF 2532 Query: 286 RYYDPLQGRYITQDPIGLKGGWNFYQYPLNPVQYIDSMGLAS 327 RYYDP GRY++ DP+GL GG N Y NP+ D +GL S Sbjct: 2533 RYYDPATGRYVSPDPLGLSGGPNPTAYVSNPLTVADPLGLTS 2574 >UniRef50_UPI0001AF2680 RHS/YD repeat-containing protein n=1 Tax=Streptomyces roseosporus NRRL 11379 RepID=UPI0001AF2680 Length = 1592 Score = 79.3 bits (194), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 83/267 (31%), Positives = 113/267 (42%), Gaps = 38/267 (14%) Query: 68 SRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGD-RLTTIQN-DRTRIQTI 125 + Y YD LGR +R R LSRKP Y WD + RL+++ D TR + Sbjct: 1222 THYEYDALGRVTLRRKTR----------LSRKPDTWQYAWDAENRLSSVTTPDGTRWRYR 1271 Query: 126 YQP-GSFTPLIRVETATGELAKTQRRSLADTL---QQSGGEDGGSVVFPPVLVQMLDRLE 181 Y P G T R+ ++ GE + R D L +Q+ E G P +V D Sbjct: 1272 YDPLGRRTAKQRL-SSDGESVVEEVRFAWDGLTLCEQTAREPG----LPNTVVLTWDHRA 1326 Query: 182 SEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGA 241 LA ++ R + T + Q ++D R+ D G P LV G Sbjct: 1327 GVPLA-----QTERII-----TADTRQEEVD------RRFFAIATDLVGAPTELVDPSGD 1370 Query: 242 TEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEESGLYYNRHRYYDPLQGRYITQDPI 301 W + WG L R PGQ D E+GL+YN R+YDP RY++ DP+ Sbjct: 1371 IAWRSRTTLWGATAWPRTSTAYTPL-RFPGQYDDPETGLHYNFFRHYDPDAARYVSPDPL 1429 Query: 302 GLKGGWNFYQYPLNPVQYIDSMGLASK 328 GL G N Y NP + D +GL K Sbjct: 1430 GLAAGPNPVAYVDNPFTWCDPLGLMPK 1456 >UniRef50_UPI000190F33A Rhs-family protein n=2 Tax=Salmonella enterica subsp. enterica serovar Typhi RepID=UPI000190F33A Length = 138 Score = 79.3 bits (194), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 35/63 (55%), Positives = 47/63 (74%) Query: 263 LQQLIRLPGQQYDEESGLYYNRHRYYDPLQGRYITQDPIGLKGGWNFYQYPLNPVQYIDS 322 Q +RLPGQ +D+E+GL+YN RYY P GR+++QDPIGL+GG N Y Y NP+ +ID Sbjct: 4 FHQPLRLPGQYFDDETGLHYNLFRYYAPECGRFVSQDPIGLRGGLNLYAYCPNPLTWIDP 63 Query: 323 MGL 325 +GL Sbjct: 64 LGL 66 >UniRef50_UPI0001B53B37 YD repeat protein n=1 Tax=Streptomyces sp. AA4 RepID=UPI0001B53B37 Length = 1465 Score = 79.3 bits (194), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 42/103 (40%), Positives = 54/103 (52%), Gaps = 1/103 (0%) Query: 226 CDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEESGLYYNRH 285 D G L+ G W A+ WG + +R PGQ +DEESGLYYN Sbjct: 1259 TDFAGAATELIDPGGNVAWHADRTLWGYRAGASQ-GGVSVPMRFPGQYHDEESGLYYNYF 1317 Query: 286 RYYDPLQGRYITQDPIGLKGGWNFYQYPLNPVQYIDSMGLASK 328 RYYDP GRY + DP+GL GG N + Y NP ++D GL++ Sbjct: 1318 RYYDPETGRYASPDPLGLHGGDNPHAYVANPTSWLDPFGLSAN 1360 >UniRef50_Q3JSF4 RhsD protein n=23 Tax=Burkholderia pseudomallei RepID=Q3JSF4_BURP1 Length = 1593 Score = 79.0 bits (193), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 43/116 (37%), Positives = 62/116 (53%), Gaps = 1/116 (0%) Query: 220 KIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEESG 279 + + + D G P+ + G W A Y G + + E +QQ IRL GQ +D ESG Sbjct: 1336 RTYFFENDLNGAPVRIYDDCGRIVWEARYGPHGGIASIET-DVIQQPIRLQGQIFDWESG 1394 Query: 280 LYYNRHRYYDPLQGRYITQDPIGLKGGWNFYQYPLNPVQYIDSMGLASKYGHLNNG 335 L YNR+RY+ G +++QDPIGL GG N Y++ N + D +GL + NG Sbjct: 1395 LSYNRYRYFLSSIGAFVSQDPIGLVGGVNLYRFAPNAFGWTDPLGLKKRKRKFVNG 1450 >UniRef50_C6WJA6 YD repeat protein n=3 Tax=Actinosynnema mirum DSM 43827 RepID=C6WJA6_ACTMD Length = 1509 Score = 79.0 bits (193), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 42/108 (38%), Positives = 59/108 (54%), Gaps = 1/108 (0%) Query: 220 KIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEESG 279 + H D G+P L+ GA W ++ WG +L E L R GQ +D E+G Sbjct: 1270 RFHAVVSDVVGMPSELLDDAGALVWRSQRTLWGAVLAELAGGPDCPL-RFAGQYHDRETG 1328 Query: 280 LYYNRHRYYDPLQGRYITQDPIGLKGGWNFYQYPLNPVQYIDSMGLAS 327 L+YN HRYYDP RY + DP+GL G N + Y +NP++ D +GL+ Sbjct: 1329 LFYNVHRYYDPETARYSSPDPLGLLAGPNPHAYVVNPLRLTDPLGLSG 1376 Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust. Identities = 46/133 (34%), Positives = 58/133 (43%), Gaps = 20/133 (15%) Query: 6 RIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPL 65 R A D H+ +D GR+ + G ERT RY +D++ R+V T A Sbjct: 1145 RRAGDVHF--EHDAQGRVVVRAHRTLSG-----RERTWRYGWDAEDRMVSATTPDGAR-- 1195 Query: 66 VESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTI 125 Y YD LGRRVAK ER G + R V WDG L T + Sbjct: 1196 --WAYRYDGLGRRVAK-----ERLDAGGAVVERVDFV----WDGLVLVEQITAGTALTWD 1244 Query: 126 YQPGSFTPLIRVE 138 Y+PGS PL +VE Sbjct: 1245 YEPGSHRPLTQVE 1257 >UniRef50_Q6FD94 Putative RHS-related protein n=1 Tax=Acinetobacter sp. ADP1 RepID=Q6FD94_ACIAD Length = 552 Score = 78.6 bits (192), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 45/108 (41%), Positives = 60/108 (55%), Gaps = 3/108 (2%) Query: 221 IHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEESGL 280 ++ H DH G P L + W ++ + + + + + + Q I LPGQ YD ESGL Sbjct: 309 LNFVHNDHLGRPEVLTNLSKTVVWKSQNNSYDSNVIQSSIGQFN--IGLPGQYYDVESGL 366 Query: 281 YYNRHRYYDPLQGRYITQDPIGLKGGWNFYQY-PLNPVQYIDSMGLAS 327 +YN +RY+D GRY DPIGL GG N Y Y NPV +ID GL S Sbjct: 367 WYNWNRYFDGTVGRYTQPDPIGLAGGVNTYTYVGNNPVNFIDPYGLWS 414 >UniRef50_D1AA66 YD repeat-containing protein n=1 Tax=Thermomonospora curvata DSM 43183 RepID=D1AA66_THECD Length = 1197 Score = 78.6 bits (192), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 41/108 (37%), Positives = 56/108 (51%), Gaps = 1/108 (0%) Query: 218 ARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEE 277 R+ H D G P+ LV+ +G+ W + WG Q+ + PGQ YD E Sbjct: 1012 VRRFHAIIADLVGTPVELVAPDGSISWRSHAAVWGAPY-VSRADQISCPLGFPGQYYDSE 1070 Query: 278 SGLYYNRHRYYDPLQGRYITQDPIGLKGGWNFYQYPLNPVQYIDSMGL 325 +GLY+N RYY P GRY++ DP+GL N Y Y +NP + D GL Sbjct: 1071 TGLYFNYFRYYSPFDGRYLSPDPLGLSPQPNPYIYVINPFVWADPFGL 1118 >UniRef50_B2STD6 RHS Repeat family n=18 Tax=Bacteria RepID=B2STD6_XANOP Length = 1579 Score = 78.2 bits (191), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 43/111 (38%), Positives = 65/111 (58%), Gaps = 5/111 (4%) Query: 219 RKIHLYH-CDHRGLPLALVSTEGATEWCAEYDEWGN-LLNEENPHQLQQLIRLPGQQYDE 276 R + LY+ D G P+ + + E W A Y G+ +++ EN + I GQ D+ Sbjct: 1331 RGVSLYYQVDPNGSPVRVFTKESEVVWSASYGAHGDRIVDVEN---IFNPISGQGQYRDD 1387 Query: 277 ESGLYYNRHRYYDPLQGRYITQDPIGLKGGWNFYQYPLNPVQYIDSMGLAS 327 ESGL+YNR+RYY+ G Y++QDP+G+ G N Y Y LN + ++D +GL S Sbjct: 1388 ESGLFYNRYRYYESSVGAYLSQDPMGMLTGSNVYSYGLNAMGWVDPLGLVS 1438 >UniRef50_B5I7B2 Rhs repeat protein n=1 Tax=Streptomyces sviceus ATCC 29083 RepID=B5I7B2_9ACTO Length = 1249 Score = 78.2 bits (191), Expect = 7e-13, Method: Compositional matrix adjust. Identities = 42/109 (38%), Positives = 56/109 (51%), Gaps = 1/109 (0%) Query: 219 RKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEES 278 R+ D G P L++ +G W + WG+ + + L R PGQ +D E+ Sbjct: 984 RRFFAIVTDLAGAPTDLIAPDGTIAWHSRSTAWGSTQSHRDATAYTPL-RYPGQYFDPET 1042 Query: 279 GLYYNRHRYYDPLQGRYITQDPIGLKGGWNFYQYPLNPVQYIDSMGLAS 327 GL+YN +RYYDP GRY T DP+GL N Y Y NP D +GLA Sbjct: 1043 GLHYNLNRYYDPELGRYTTPDPLGLAPAVNHYTYVPNPFTLADPLGLAG 1091 Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust. Identities = 46/157 (29%), Positives = 64/157 (40%), Gaps = 22/157 (14%) Query: 5 NRIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEP 64 +R+ + Y YD GRL +K G + T + +D++ RL TQ P Sbjct: 860 SRVTQAGRTHYTYDVQGRLAQKRVTTLSG-----KQLTWTFTWDAEDRL-----TQVQAP 909 Query: 65 L-VESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQ 123 V RY YD LGRR AK R + R VT Y WDG +L + + Sbjct: 910 GDVAWRYFYDALGRRTAKHRLRAD---------GRIEDVTTYCWDGGQLA--EQHTNGVT 958 Query: 124 TIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSG 160 I+ PL + E T E ++ RR A +G Sbjct: 959 LIWDYTGLHPLAQREAKTQEQGESDRRFFAIVTDLAG 995 >UniRef50_D1PUV1 RHS family protein n=1 Tax=Prevotella bergensis DSM 17361 RepID=D1PUV1_9BACT Length = 284 Score = 77.8 bits (190), Expect = 7e-13, Method: Compositional matrix adjust. Identities = 43/108 (39%), Positives = 60/108 (55%), Gaps = 6/108 (5%) Query: 226 CDHRGLPLALVSTEGATEWCAEYDEWGNLLNEE--NPHQLQQLIRLP----GQQYDEESG 279 DH G P+ + +G W D G ++ E N + +++P GQ YDEE Sbjct: 39 TDHLGTPMEAYNEQGEEVWYRRLDMNGKVIEERSMNYTSYKDYVKIPFLFQGQYYDEEVK 98 Query: 280 LYYNRHRYYDPLQGRYITQDPIGLKGGWNFYQYPLNPVQYIDSMGLAS 327 L YNR RYYDP GRYI++DP+ L GG N Y+Y N + + D +GL+S Sbjct: 99 LAYNRFRYYDPELGRYISEDPVRLLGGSNLYRYVENTILWCDPLGLSS 146 >UniRef50_D0KG38 Rhs family protein-like protein n=1 Tax=Pectobacterium wasabiae WPP163 RepID=D0KG38_PECWW Length = 230 Score = 77.4 bits (189), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 39/96 (40%), Positives = 52/96 (54%), Gaps = 5/96 (5%) Query: 235 LVSTEGATEWCAEYDEWGNLLNEENP-----HQLQQLIRLPGQQYDEESGLYYNRHRYYD 289 + E A W +Y +G + + H Q +R GQ DEE+GL+YN RYYD Sbjct: 1 MTDAESAVRWSGDYGSFGAVNGQTQDSEGLRHGKSQSLRYAGQYADEETGLHYNLFRYYD 60 Query: 290 PLQGRYITQDPIGLKGGWNFYQYPLNPVQYIDSMGL 325 P GR+ TQ IGL GG N YQY N + ++D +GL Sbjct: 61 PTVGRFTTQGLIGLAGGLNLYQYAPNSLGWVDPLGL 96 >UniRef50_A3KUM5 Rhs family protein n=10 Tax=Pseudomonas aeruginosa RepID=A3KUM5_PSEAE Length = 931 Score = 77.4 bits (189), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 55/153 (35%), Positives = 71/153 (46%), Gaps = 5/153 (3%) Query: 175 QMLDRLESEILADRVSEESRRWLASCGL-TVEQMQNQMDPVYTPARKIHLYHCDHRGLPL 233 Q+L E + ++ + WL S L T++ + V P + H DH P Sbjct: 630 QLLGEAEHDGSGRKLRAQYYLWLDSLPLATIDADYDVQGKVGNPT--LLYLHGDHLDTPR 687 Query: 234 ALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEESGLYYNRHRYYDPLQG 293 G W + D +G + Q +R PGQ YD ESGL+YN R YDP G Sbjct: 688 LATDASGQIAWQWQSDAFGRG-EALSQGSTQVNLRFPGQYYDAESGLHYNYFRDYDPETG 746 Query: 294 RYITQDPIGLKGGWNFYQYPL-NPVQYIDSMGL 325 RY+ DPIGLKGG N Y Y NP+ Y D GL Sbjct: 747 RYVESDPIGLKGGLNTYGYVYGNPLTYSDPKGL 779 >UniRef50_UPI0001B58169 YD repeat-containing protein n=1 Tax=Streptomyces sp. AA4 RepID=UPI0001B58169 Length = 1724 Score = 77.0 bits (188), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 46/126 (36%), Positives = 59/126 (46%), Gaps = 11/126 (8%) Query: 226 CDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEESGLYYNRH 285 D G P L+ G W A WG + P ++ PGQ D ESGL+YN Sbjct: 1213 TDAIGTPTELIDEHGGLAWSARRSLWGRVQPGGIP------LQFPGQYADAESGLHYNVF 1266 Query: 286 RYYDPLQGRYITQDPIGLKGGWNFYQYPLNPVQYIDSMGLASKYGHLNNGGYGARPNKPP 345 RYYDP RYI+QDP+GL+GG N Y +P D +GL + G G + PP Sbjct: 1267 RYYDPAAARYISQDPLGLEGGPNPSNYVPDPFAATDVLGL-----KCGDKGKGKATDPPP 1321 Query: 346 TPDPSK 351 +K Sbjct: 1322 ADSTAK 1327 >UniRef50_A4B8X0 YD repeat n=1 Tax=Reinekea blandensis MED297 RepID=A4B8X0_9GAMM Length = 1098 Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 46/107 (42%), Positives = 56/107 (52%), Gaps = 2/107 (1%) Query: 220 KIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEESG 279 ++ H DH G P L + G W +G + +E + L L PGQ D ESG Sbjct: 843 EVAFIHSDHLGTPKLLTDSLGNVVWQQHTTPFGEV-HETLGNGLGYLQSFPGQWRDSESG 901 Query: 280 LYYNRHRYYDPLQGRYITQDPIGLKGGWNFYQY-PLNPVQYIDSMGL 325 L YN +R YDP GRYI DPIGL GG N Y Y NP+ ID +GL Sbjct: 902 LSYNYYRDYDPSLGRYIQSDPIGLGGGLNTYAYVGGNPISRIDPLGL 948 >UniRef50_A9C2K7 Rhs family protein-like protein n=1 Tax=Delftia acidovorans SPH-1 RepID=A9C2K7_DELAS Length = 285 Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 46/120 (38%), Positives = 60/120 (50%), Gaps = 14/120 (11%) Query: 220 KIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNL----------LNEENPHQLQQL--- 266 +++ H DH P L + +G W +G + P Q + Sbjct: 10 RLYAIHTDHLNTPRRLTNQQGQVAWQWLISGFGEVRPTTGDRGYGQTVSGPSYAQAVKFD 69 Query: 267 IRLPGQQYDEESGLYYNRHRYYDPLQGRYITQDPIGLKGGWNFYQY-PLNPVQYIDSMGL 325 +R PGQ +DEE+GL YN HRYYD GRYI DPIGL+GGWN + Y NP+ Y D GL Sbjct: 70 LRYPGQVFDEETGLSYNLHRYYDAATGRYIQADPIGLEGGWNRFGYVGGNPLIYGDPQGL 129 >UniRef50_A5GE16 YD repeat protein n=1 Tax=Geobacter uraniireducens Rf4 RepID=A5GE16_GEOUR Length = 1600 Score = 76.6 bits (187), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 83/359 (23%), Positives = 133/359 (37%), Gaps = 69/359 (19%) Query: 7 IARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLV 66 IA + Y YD GR T + ++ T Y YD RL + T + Sbjct: 1156 IAPAGTFTYGYDALGRRTS---------LGYPNQVTAAYTYDDAGRLTSLSHTAGGSTIA 1206 Query: 67 ESRYLYDPLGRRVAKRVWRRERDLTGWM-----SLSRKPQVTWYGWDGDR---------- 111 Y D +G R +K E L + + S KP+ Y G+R Sbjct: 1207 AFSYALDNVGNRTSKATTEAENYLYDVVYRLLNAASPKPETFTYDAVGNRQTGPGAKDTG 1266 Query: 112 -LTTIQNDRTRIQTIY-------------QPGSFTP-----------LIRVETATGELAK 146 L N T+ + + PG+F L++VE G + Sbjct: 1267 YLHNAGNQMTQGRKLAYGYDNNGNQTNRAVPGAFDKSWTQTWDNENRLVKVEKVKGAEKR 1326 Query: 147 T--------QRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSEESRRWLA 198 T RR + Q + +DG + V D + E+ D ++ + Sbjct: 1327 TVSFSYDPFGRRIVK---QMTVVKDGVTKTSSSSYVYDNDNIALEVYTDETGAVTKTFYT 1383 Query: 199 SCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEE 258 E + + + + YH D G +++ EYD +G + + Sbjct: 1384 HGAGIDEHLALEH------GGQFYYYHADGLGSIVSITDANRNVVQSYEYDSFGMV---K 1434 Query: 259 NPHQLQQLIRLPGQQYDEESGLYYNRHRYYDPLQGRYITQDPIGLKGGWNFYQYPLNPV 317 G+++D+E+GLY+ R RYYDP++GR+I++DP+G KGG N Y Y N V Sbjct: 1435 PSTVFANSYTYTGREWDKETGLYFYRARYYDPMEGRFISKDPVGFKGGINIYAYVSNNV 1493 >UniRef50_C7PJF4 YD repeat protein n=2 Tax=Chitinophaga pinensis DSM 2588 RepID=C7PJF4_CHIPD Length = 1401 Score = 76.3 bits (186), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 86/327 (26%), Positives = 115/327 (35%), Gaps = 80/327 (24%) Query: 3 PDNRIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYA 62 P ++A + YD G L +K DL + +Y + L TR Sbjct: 1007 PGGKLAESTEARFIYDEEGFLVKKIDLKAADAV-------WQYEWYGNGMLKKVTRPD-- 1057 Query: 63 EPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRI 122 +VE RY D LGRR+ K+ K Q+T + WDG+ + Sbjct: 1058 NKVVEFRY--DALGRRIEKQY---------------KGQITRFVWDGN---------ITL 1091 Query: 123 QTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLES 182 + P S P I ++ L D Q PV Sbjct: 1092 HQWHYPASERPAIEID------------ELGDIRQHHP---------EPV---------- 1120 Query: 183 EILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGAT 242 +E W+ G + + D Y D+ G P G Sbjct: 1121 ------PAENLITWVFEEGTLIPVAKLTQDARYAIL-------SDYLGTPAEAYDASGEK 1167 Query: 243 EWCAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEESGLYYNRHRYYDPLQGRYITQDPIG 302 W E D +G L R GQ D E+GLYYNR RYY PL+G YI+QDPI Sbjct: 1168 VWEGELDIYGKLRKLAGASDFIPF-RRQGQYEDVETGLYYNRFRYYSPLEGLYISQDPIR 1226 Query: 303 LKGGWNFYQYPLNPVQYIDSMGLASKY 329 L+GG FY+Y P +D GL Y Sbjct: 1227 LEGGSRFYEYSRCPTLILDPFGLVDFY 1253 >UniRef50_Q30CR7 LipX3 n=4 Tax=Streptomyces RepID=Q30CR7_STRAU Length = 1560 Score = 76.3 bits (186), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 89/313 (28%), Positives = 114/313 (36%), Gaps = 80/313 (25%) Query: 5 NRIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEP 64 R+ R Y YD GRL KT + G RT +Y + ++ RLV A Sbjct: 1158 TRLHRAGRTTYAYDGQGRLIRKTVRLLSG-----GRRTSQYGWSAEDRLVR----TVAPD 1208 Query: 65 LVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTT-IQNDRTRIQ 123 E RY YDP GRRV K +R TG L + T + WDG RL I+ D T Sbjct: 1209 GSEWRYTYDPDGRRVGK-----QRLGTGGDVL----EETTFSWDGTRLAEQIETDGTVTT 1259 Query: 124 TIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESE 183 Y PGS+ P+ + + E R GG D G Sbjct: 1260 WDYAPGSYRPVAQTVSGGRERPAVNR----------GGSDPG------------------ 1291 Query: 184 ILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATE 243 + R+ A D V TP + S +G Sbjct: 1292 -------DTDARFYAIV----------TDLVGTPTELV---------------SADGRIV 1319 Query: 244 WCAEYDEWGNLLNEENPH-QLQQLIRLPGQQYDEESGLYYNRHRYYDPLQGRYITQDPIG 302 W + WG P + +R PGQ D E+G YN RYYDP RY++ DP+G Sbjct: 1320 WHRRFTAWGQPTGTPTPGPEADCPLRFPGQYADAETGWNYNYFRYYDPETARYVSADPLG 1379 Query: 303 LKGGWNFYQYPLN 315 L N Y Y N Sbjct: 1380 LAPDPNDYAYVTN 1392 >UniRef50_B4V251 LipX3 n=2 Tax=Streptomyces RepID=B4V251_9ACTO Length = 1253 Score = 76.3 bits (186), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 76/316 (24%), Positives = 120/316 (37%), Gaps = 75/316 (23%) Query: 15 YRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYLYDP 74 Y +D GRL KT + G Y ++++ RL + A Y YDP Sbjct: 904 YEHDAQGRLIRKTRKLLNG-----QRLVWTYAWNAEDRLTEAVTPEGAH----WHYAYDP 954 Query: 75 LGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQT-IYQPGSFTP 133 LGRR++K + + T + WD RL ++ ++ T Y PG+ P Sbjct: 955 LGRRISKHRLAADGSVV---------DRTEFSWDDVRLAERRSPDGQVTTWDYAPGTHRP 1005 Query: 134 LIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSEES 193 L + + P++ + L + + D ++ S Sbjct: 1006 LTQTD------------------------------HKPLVREQGTSLLANLAQDTTTDYS 1035 Query: 194 RRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWG- 252 R+ A D G P LV++ G W WG Sbjct: 1036 TRFYAVV-------------------------TDALGTPTELVASGGELAWQRRTTLWGT 1070 Query: 253 NLLNEENPHQLQQLIRLPGQQYDEESGLYYNRHRYYDPLQGRYITQDPIGLKGGWNFYQY 312 + + IR PGQ D E+GL+YN RYY+P RYI+ DP+GL+ N + Y Sbjct: 1071 DFPAPTDTTSADCPIRFPGQYADSETGLHYNFFRYYEPESARYISADPLGLEPAPNHHAY 1130 Query: 313 PLNPVQYIDSMGLASK 328 +N + + D +GLA++ Sbjct: 1131 VVNALGWTDPLGLAAR 1146 >UniRef50_D1VCV7 YD repeat protein n=1 Tax=Frankia sp. EuI1c RepID=D1VCV7_9ACTO Length = 1572 Score = 76.3 bits (186), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 55/164 (33%), Positives = 72/164 (43%), Gaps = 2/164 (1%) Query: 220 KIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEESG 279 + H D G P LV +G W + WG + P +R PGQ +D E+G Sbjct: 1349 QFHAIVTDLIGTPTELVDPDGRLAWHSRATLWG-VSPPSTPTTTDCPLRFPGQYHDPETG 1407 Query: 280 LYYNRHRYYDPLQGRYITQDPIGLKGGWNFYQYPLNPVQYIDSMGLASKYGHLNNGGYGA 339 L YN HRYYDP RY T D +GL N + Y NP+ +ID GLA L+ G Sbjct: 1408 LNYNFHRYYDPATARYKTSDALGLSPAPNPWTYVTNPLTWIDPFGLAPCKDLLHAFGNAQ 1467 Query: 340 RPNKPP-TPDPSKLPDIAKQLRLPYPIDQASSAPNVFKTFFRAL 382 P P D PD + P + AS+ +V K R + Sbjct: 1468 GPRAPRLGKDFDIGPDGMIIPQEPPEVKGASTFADVTKVPVRGI 1511 >UniRef50_C4KA75 YD repeat protein n=1 Tax=Thauera sp. MZ1T RepID=C4KA75_THASP Length = 1892 Score = 76.3 bits (186), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 49/152 (32%), Positives = 70/152 (46%), Gaps = 10/152 (6%) Query: 177 LDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALV 236 L L++ D ++ +RR LA G + P + H +H G P Sbjct: 1336 LAVLDTPARPDSATDSARRILADLGRIAQSW-------LAPQAGLAWLHTNHLGAPELAT 1388 Query: 237 STEGATEWCAEYDEWGNLLNEENPHQ--LQQLIRLPGQQYDEESGLYYNRHRYYDPLQGR 294 +G W A + +G +P +RLPGQ +D E+GL+YNR RYY P G Sbjct: 1389 DADGEPLWRARHAPFGAATVTTSPRHPDFTLDLRLPGQVFDAETGLHYNRRRYYAPTLGE 1448 Query: 295 YITQDPIGLKGGWNFYQY-PLNPVQYIDSMGL 325 Y+T DP+G G N Y Y NP++ +D GL Sbjct: 1449 YLTPDPLGTPDGPNPYAYAAFNPLRNVDPDGL 1480 >UniRef50_B6VUY0 Putative uncharacterized protein n=2 Tax=Bacteroides RepID=B6VUY0_9BACE Length = 1442 Score = 75.9 bits (185), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 48/141 (34%), Positives = 67/141 (47%), Gaps = 8/141 (5%) Query: 190 SEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWCAEYD 249 +E+ W+ G V + Q Y+ D+ G P+ + +G W D Sbjct: 1183 TEDITTWVFEAGTFVPTAKIQDGKQYSIV-------SDYLGTPIQMYDEQGNKTWDCTLD 1235 Query: 250 EWGNLLNEENPHQLQQLIRLPGQQYDEESGLYYNRHRYYDPLQGRYITQDPIGLKGG-WN 308 +G +L + + R GQ DEE+GLYYNR RYYD G YI+QDPIGL+ N Sbjct: 1236 IYGKVLAIDKGTEFDCPFRYQGQYEDEETGLYYNRFRYYDSNAGSYISQDPIGLESDTLN 1295 Query: 309 FYQYPLNPVQYIDSMGLASKY 329 FY Y + ID +GL + Y Sbjct: 1296 FYDYVCDLNDGIDPLGLYNPY 1316 >UniRef50_B4EGW8 RHS-family protein n=9 Tax=Burkholderiaceae RepID=B4EGW8_BURCJ Length = 1515 Score = 75.9 bits (185), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 42/108 (38%), Positives = 56/108 (51%), Gaps = 8/108 (7%) Query: 226 CDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQ--------LQQLIRLPGQQYDEE 277 D G P + +G W A Y WG LL + P + +R GQ D+E Sbjct: 1258 TDQIGRPKTVFDEQGRPVWKAAYSLWGKLLPVKRPANDADCGATSIDTTLRFSGQWADDE 1317 Query: 278 SGLYYNRHRYYDPLQGRYITQDPIGLKGGWNFYQYPLNPVQYIDSMGL 325 +GL YN +RYYDP G+Y++ DPIGL GG Y +P Q+ID +GL Sbjct: 1318 TGLNYNLNRYYDPDSGQYLSADPIGLLGGARTQAYVHDPSQWIDPLGL 1365 >UniRef50_C7QAC6 YD repeat protein n=2 Tax=Bacteria RepID=C7QAC6_CATAD Length = 1508 Score = 75.9 bits (185), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 51/159 (32%), Positives = 74/159 (46%), Gaps = 24/159 (15%) Query: 189 VSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWCAEY 248 V++ R W A E Q ++D ++ H + G+P LV+ +G W Sbjct: 1274 VAQRRRSWAA------EAAQERVDEMF------HAIVTNLVGMPTELVTPDGRVAWYQNT 1321 Query: 249 DEWGNLLNEENPHQ--LQQLIRLPGQQYDEESGLYYNRHRYYDPLQGRYITQDPIGLKGG 306 D +G + L+ +R GQ +D E+GL+YN RYYDP Y+T DP+GL Sbjct: 1322 DLYGQSVAVATGGDPDLECPLRFAGQYFDAETGLHYNVQRYYDPAIAAYLTPDPLGLAPA 1381 Query: 307 WNFYQYPLNPVQYIDSMGLASKYGHLNNGGYGARPNKPP 345 N + Y NP+ +D +GLAS GAR PP Sbjct: 1382 LNDHAYVPNPLTMVDPLGLAS----------GARVPSPP 1410 >UniRef50_UPI0001B56FBA YD repeat-containing protein n=1 Tax=Streptomyces sp. AA4 RepID=UPI0001B56FBA Length = 1624 Score = 75.9 bits (185), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 38/96 (39%), Positives = 55/96 (57%), Gaps = 2/96 (2%) Query: 230 GLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEESGLYYNRHRYYD 289 G P L+ G W A +G ++ E + +R GQ +DEE+GL+YN HRYYD Sbjct: 1270 GTPTELLDDRGEIAWQARSSLFGVVVAESGGTGIP--LRFQGQYFDEETGLHYNFHRYYD 1327 Query: 290 PLQGRYITQDPIGLKGGWNFYQYPLNPVQYIDSMGL 325 P+ RY++ DP+GL GG + + Y NP +D +GL Sbjct: 1328 PVLARYLSPDPLGLGGGLDPHAYVSNPHVSVDPLGL 1363 >UniRef50_C6CI62 YD repeat protein n=7 Tax=Enterobacteriaceae RepID=C6CI62_DICZE Length = 1475 Score = 75.5 bits (184), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 49/116 (42%), Positives = 61/116 (52%), Gaps = 3/116 (2%) Query: 230 GLPLALVSTEGATEWCA-EYDEWGNLLNEENPHQLQQLIRLPGQQYDEESGLYYNRHRYY 288 G P AL + +G W A WG E++ L GQ D ESGL YNR RYY Sbjct: 1222 GTPQALFTPDGTLRWQAPTATLWGQRQAEKSESPDPGLA-FAGQLRDSESGLCYNRFRYY 1280 Query: 289 DPLQGRYITQDPIGLKGGWNFYQYPLNPVQYIDSMGLASKYGHLNN-GGYGARPNK 343 DP G Y++ DPIG+ GG N Y Y NP+ ++D GLA +LN GG A+ K Sbjct: 1281 DPAGGCYVSPDPIGIAGGENNYGYVQNPMCWVDPFGLAGCSSYLNAWGGRNAKAFK 1336 >UniRef50_UPI00016B0868 Rhs family protein n=1 Tax=Burkholderia pseudomallei 112 RepID=UPI00016B0868 Length = 242 Score = 75.5 bits (184), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 40/100 (40%), Positives = 55/100 (55%), Gaps = 2/100 (2%) Query: 235 LVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEESGLYYNRHRYYDPLQGR 294 + + G W YDE G L+ + I L GQ D E+GL+YNRHRYYDP G Sbjct: 1 MTDSSGREVWATGYDENGRLVPIN--ADIYNPIHLQGQYRDAETGLHYNRHRYYDPALGS 58 Query: 295 YITQDPIGLKGGWNFYQYPLNPVQYIDSMGLASKYGHLNN 334 +I++DP+GL G N Y+Y N + + D +G +K NN Sbjct: 59 FISKDPLGLAAGVNLYRYAPNSIGWADPLGFQAKPSPNNN 98 >UniRef50_A9EVR3 Conserved carbohydrate-binding protein, Rhs family n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=A9EVR3_SORC5 Length = 1367 Score = 75.5 bits (184), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 42/99 (42%), Positives = 52/99 (52%), Gaps = 1/99 (1%) Query: 227 DHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEESGLYYNRHR 286 DH G P L T G W AE D G E+ + R PGQ D E+GLYYNR R Sbjct: 1140 DHLGAPTTLFDTSGVQVWAAETDTLGRTAVEQGAPE-DCPWRWPGQYEDPETGLYYNRFR 1198 Query: 287 YYDPLQGRYITQDPIGLKGGWNFYQYPLNPVQYIDSMGL 325 YYDP G Y++ DP+GL G Y Y + + + D +GL Sbjct: 1199 YYDPDAGNYVSPDPLGLLAGTAEYAYAPDSLVWFDPLGL 1237 >UniRef50_C9NF93 YD repeat protein n=1 Tax=Streptomyces flavogriseus ATCC 33331 RepID=C9NF93_9ACTO Length = 1536 Score = 75.1 bits (183), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 46/123 (37%), Positives = 61/123 (49%), Gaps = 1/123 (0%) Query: 204 VEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQL 263 E++ Q P T + D G P L+ G W WG ++ Sbjct: 1308 TERVATQGAPQDTVDERFFAIITDLVGTPTELIDESGFISWRVRRSVWGTTEWAKDSSAY 1367 Query: 264 QQLIRLPGQQYDEESGLYYNRHRYYDPLQGRYITQDPIGLKGGWNFYQYPLNPVQYIDSM 323 L R PGQ +D+ES L+YN RYYDP RYI+ DPIGL+GG N + Y NP +ID + Sbjct: 1368 TPL-RFPGQYFDQESLLHYNYLRYYDPDVSRYISPDPIGLEGGPNPHWYGPNPYTWIDPL 1426 Query: 324 GLA 326 GL+ Sbjct: 1427 GLS 1429 >UniRef50_C5T0D9 YD repeat protein n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T0D9_ACIDE Length = 1001 Score = 75.1 bits (183), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 34/60 (56%), Positives = 42/60 (70%), Gaps = 1/60 (1%) Query: 267 IRLPGQQYDEESGLYYNRHRYYDPLQGRYITQDPIGLKGGWNFYQY-PLNPVQYIDSMGL 325 +R PGQQ+D E+ L YN HRYYD GRYI DPIGL GGWN + Y NP+ ++D +GL Sbjct: 801 LRYPGQQWDAETKLAYNLHRYYDAATGRYIQADPIGLGGGWNRFGYVGGNPLSFVDPVGL 860 >UniRef50_C7Q0B8 YD repeat protein n=1 Tax=Catenulispora acidiphila DSM 44928 RepID=C7Q0B8_CATAD Length = 1489 Score = 75.1 bits (183), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 54/148 (36%), Positives = 71/148 (47%), Gaps = 5/148 (3%) Query: 213 PVYTPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDE-WGNLLNEENPHQLQQLIRLPG 271 PV L D G P LVS +G W WG + P + +R PG Sbjct: 1266 PVSASEPDFALVVTDPVGTPTELVSADGHVVWQQRRASIWGLPADIVPPDADEFPLRFPG 1325 Query: 272 QQYDEESGLYYNRHRYYDPLQGRYITQDPIGLKGGWNFYQYPLNPVQYIDSMGLASKYGH 331 Q +D E+GL+YN +RYYDP Y+T DP+GL+ N Y Y NP+ D +GL G+ Sbjct: 1326 QYHDSETGLHYNLNRYYDPEAAAYLTPDPLGLEPAPNQYGYVGNPLADSDPLGLYPASGN 1385 Query: 332 LNNGGYGARPNKPPTPDPSKLPDIAKQL 359 GG G+ N P S+ D+AK L Sbjct: 1386 A-RGGNGSNENVMP---KSQADDVAKYL 1409 Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust. Identities = 43/131 (32%), Positives = 64/131 (48%), Gaps = 19/131 (14%) Query: 7 IARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLV 66 I+ +YR+D GR+ KT + G +T D Y +D+++RLV + E +V Sbjct: 1132 ISSAGRTVYRHDAMGRVVSKTRRLLSGGTKTWD-----YRWDARNRLV---AARTPENVV 1183 Query: 67 ESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTI-QNDRTRIQTI 125 + Y YDPLGRRV K L G S++ + + T WD RL + D T Sbjct: 1184 WT-YQYDPLGRRVGK------VRLNGDGSVAEQIRFT---WDKTRLAAVTAADGTVTTWD 1233 Query: 126 YQPGSFTPLIR 136 Y P +FTP+ + Sbjct: 1234 YLPDTFTPIAQ 1244 >UniRef50_B2PYS3 Putative uncharacterized protein n=1 Tax=Providencia stuartii ATCC 25827 RepID=B2PYS3_PROST Length = 191 Score = 74.7 bits (182), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 42/107 (39%), Positives = 57/107 (53%), Gaps = 12/107 (11%) Query: 261 HQLQQLIRLPGQQYDEESGLYYNRHRYYDPLQGRYITQDPIGLKGGWNFYQYPLNPVQYI 320 +Q +R GQ +D E+GL++N R+YDP GR+I DPIGL GG N YQY NP+ +I Sbjct: 2 ESFEQNLRYAGQYFDNETGLHFNTFRFYDPQIGRFIMPDPIGLLGGVNLYQYAPNPLVWI 61 Query: 321 DSMGLASKYGHLNNGGYGARPNKPPTPDPSKLPDIAKQLRLPYPIDQ 367 D GL+ + N T P++ KQL+ YP Q Sbjct: 62 DPWGLSVVRDNYN------------TAKTLSEPEVLKQLQSKYPSAQ 96 >UniRef50_D1W448 RHS repeat-associated core domain protein n=1 Tax=Prevotella buccalis ATCC 35310 RepID=D1W448_9BACT Length = 195 Score = 74.7 bits (182), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 44/120 (36%), Positives = 62/120 (51%), Gaps = 7/120 (5%) Query: 215 YTPARKI-----HLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRL 269 YTP K+ + D+ P+ + ++G W D +G++L R Sbjct: 30 YTPVAKLTEEDSYSIVQDYMVTPIQALDSKGEVVWDCILDIYGDVLELRGKRDFIPF-RF 88 Query: 270 PGQQYDEESGLYYNRHRYYDPLQGRYITQDPIGLKGGWNFYQYPLNPVQYIDSMGLASKY 329 GQ D E+GLYYNR RYYDP G +I+QDPI + GG+N Y Y + ++D GL SKY Sbjct: 89 QGQYEDGETGLYYNRFRYYDPNSGTFISQDPISILGGFNIYAYVHDVNSWVDVFGL-SKY 147 >UniRef50_Q8GDM7 Rhs n=3 Tax=Photorhabdus RepID=Q8GDM7_PHOLU Length = 1469 Score = 74.7 bits (182), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 46/101 (45%), Positives = 55/101 (54%), Gaps = 4/101 (3%) Query: 230 GLPLALVSTEGATEWCAEYDEWGNLL---NEENPHQLQQLIRLPGQQYDEESGLYYNRHR 286 G PLAL G W L + ENP QL +R GQ +DEESGL+YNR R Sbjct: 1242 GEPLALFDPTGKRVWRRPKQSLYGLRLSGHGENP-QLDPGLRFAGQLFDEESGLFYNRFR 1300 Query: 287 YYDPLQGRYITQDPIGLKGGWNFYQYPLNPVQYIDSMGLAS 327 YY P Y++ DP+GL GG N Y Y NP +ID +GLA Sbjct: 1301 YYLPEAACYLSPDPLGLNGGPNPYAYVHNPANWIDPLGLAG 1341 >UniRef50_A9GD22 Conserved carbohydrate-binding protein, Rhs family n=2 Tax=Sorangium cellulosum 'So ce 56' RepID=A9GD22_SORC5 Length = 1351 Score = 74.7 bits (182), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 42/103 (40%), Positives = 55/103 (53%), Gaps = 3/103 (2%) Query: 224 YHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEESGLYYN 283 Y D G P LV G E E D + + +R PGQ DEE+GL YN Sbjct: 1039 YLNDDVGAPERLVGPAG--EVVCELDRSAFGAKVKEGGRTTTPLRFPGQYEDEETGLVYN 1096 Query: 284 RHRYYDPLQGRYITQDPIGLKGGWNFYQYPLN-PVQYIDSMGL 325 R+RY+DP GRY++ DP GL GG+N + Y N P +++D GL Sbjct: 1097 RYRYFDPALGRYLSADPAGLDGGFNGFDYAGNAPTRFVDPSGL 1139 >UniRef50_Q7NYN4 Probable rhs-related transmembrane protein related n=1 Tax=Chromobacterium violaceum RepID=Q7NYN4_CHRVO Length = 282 Score = 74.7 bits (182), Expect = 8e-12, Method: Compositional matrix adjust. Identities = 49/140 (35%), Positives = 64/140 (45%), Gaps = 6/140 (4%) Query: 194 RRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGN 253 +RWL L + + V PA I+ D G P +V + W E D +GN Sbjct: 6 KRWLVLGVLLSAGLLLNANVVAAPAPTIYYVQNDQLGTPREVVDSNNVEVWRWEGDAYGN 65 Query: 254 LLNEENPHQLQQL----IRLPGQQYDEESGLYYNRHRYYDPLQGRYITQDPIGLKGG-WN 308 ++P +R PGQ YD E+G YN R YDP GRY+ DP GL GG W+ Sbjct: 66 ERPNQDPSNTGNAFVFNLRYPGQYYDTETGRMYNGWRDYDPAVGRYVQSDPFGLLGGQWS 125 Query: 309 FYQY-PLNPVQYIDSMGLAS 327 Y Y NP ID G+ + Sbjct: 126 TYGYVNGNPTNAIDPSGMET 145 >UniRef50_C6WQE4 YD repeat protein n=1 Tax=Actinosynnema mirum DSM 43827 RepID=C6WQE4_ACTMD Length = 2144 Score = 73.9 bits (180), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 31/59 (52%), Positives = 41/59 (69%) Query: 267 IRLPGQQYDEESGLYYNRHRYYDPLQGRYITQDPIGLKGGWNFYQYPLNPVQYIDSMGL 325 +R PGQ +D E+GL+YN HRYYDP GRY+T+DP+GL N + Y NP +D +GL Sbjct: 1933 LRFPGQHHDAETGLHYNVHRYYDPATGRYLTRDPLGLAPAANPWTYADNPTAAVDPVGL 1991 >UniRef50_B3PHE6 RHS Repeat family n=5 Tax=cellular organisms RepID=B3PHE6_CELJU Length = 3998 Score = 73.9 bits (180), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 88/326 (26%), Positives = 136/326 (41%), Gaps = 42/326 (12%) Query: 13 YLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYLY 72 Y Y+ G++ KT+ +P+G T D Y YD+++RL R +VE+ Y Y Sbjct: 3576 YDLEYNLTGQIVRKTEYLPDGSTATFD-----YTYDNRYRLTEVKRNN---EIVEA-YGY 3626 Query: 73 DPLGRR-----VAKRVWRRERDLTGWMSLSRKPQVTWY----GWDGDRLTTIQNDRTRIQ 123 D G R V + + T L T+ G G +L + Sbjct: 3627 DANGNRTLHTSVDMGITNQSATYTQGDQLQSHGNTTYLYDANGRLGSKLKATDDGLALTT 3686 Query: 124 TIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESE 183 IY GS L++V+T + R L + L G +V V Q L + + Sbjct: 3687 YIY--GSQGQLLQVDTPDKSI-----RYLHNAL----GNRVAKLVNGTVTEQYLWQDLTT 3735 Query: 184 ILA--DRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGA 241 +LA D +R+ + G T +T + + H DH G P + + G Sbjct: 3736 LLAIYDGSGNLKQRFEYTLGHTPTS--------FTQNNQRYFIHTDHLGSPRIITDSNGN 3787 Query: 242 TEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEESGLYYNRHRYYDPLQGRYITQDPI 301 YD +GN++ + NP + Q G D+++GL +R YDP GR+ +DPI Sbjct: 3788 IVKTVSYDSYGNIIEDSNP-EFQIPFGFAGGLKDDDTGLIRFGYRDYDPETGRWTARDPI 3846 Query: 302 GLKGG-WNFYQYPL-NPVQYIDSMGL 325 G +GG N Y Y L + + +ID GL Sbjct: 3847 GFEGGDTNLYGYVLGDAINFIDIDGL 3872 >UniRef50_A9C2K9 Putative uncharacterized protein n=1 Tax=Delftia acidovorans SPH-1 RepID=A9C2K9_DELAS Length = 222 Score = 73.9 bits (180), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 34/63 (53%), Positives = 45/63 (71%), Gaps = 1/63 (1%) Query: 267 IRLPGQQYDEESGLYYNRHRYYDPLQGRYITQDPIGLKGGWNFYQY-PLNPVQYIDSMGL 325 +R PGQ +DEE+GL Y+ HRYYD GRYI DPIGL+GGWN++ Y NP+ +I GL Sbjct: 39 LRYPGQVFDEETGLSYSLHRYYDAATGRYIQADPIGLEGGWNWFGYVGGNPLNFIGPKGL 98 Query: 326 ASK 328 ++ Sbjct: 99 EAQ 101 >UniRef50_A9BX63 YD repeat protein n=2 Tax=cellular organisms RepID=A9BX63_DELAS Length = 1390 Score = 73.6 bits (179), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 41/110 (37%), Positives = 56/110 (50%), Gaps = 2/110 (1%) Query: 216 TPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQYD 275 T R H H DH P G + W A + +G L E + ++ + +R GQ +D Sbjct: 1156 TSTRIYHYLHSDHLSTPQVASDAAGRSSWQALNESFGQTL-ERSGNRTRMNLRFAGQYFD 1214 Query: 276 EESGLYYNRHRYYDPLQGRYITQDPIGLKGGWNFYQYP-LNPVQYIDSMG 324 EE+G +YN R Y P GRY+ DPIG+ GG N + Y NPV+ D G Sbjct: 1215 EETGTHYNYQRDYSPGVGRYLQTDPIGIDGGVNVFVYAEENPVKLNDPTG 1264 >UniRef50_Q12LF5 Putative uncharacterized protein n=1 Tax=Shewanella denitrificans OS217 RepID=Q12LF5_SHEDO Length = 232 Score = 73.6 bits (179), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 38/65 (58%), Positives = 44/65 (67%), Gaps = 1/65 (1%) Query: 262 QLQQLIRLPGQQYDEESGLYYNRHRYYDPLQGRYITQDPIGLKGGWNFYQY-PLNPVQYI 320 +++Q IR P Q YDEESGL+YN R YDP GRYI DPIGL GG N Y Y NP+ Y+ Sbjct: 5 KIKQAIRFPRQYYDEESGLHYNYFRDYDPELGRYIQSDPIGLAGGINTYGYVGGNPISYV 64 Query: 321 DSMGL 325 D GL Sbjct: 65 DPYGL 69 >UniRef50_B4SR21 YD repeat protein n=2 Tax=Stenotrophomonas maltophilia RepID=B4SR21_STRM5 Length = 738 Score = 73.2 bits (178), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 45/102 (44%), Positives = 53/102 (51%), Gaps = 3/102 (2%) Query: 225 HCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEESGLYYNR 284 H DH G P + S T W A +G + ++ L I PGQ YD ESGL+YN Sbjct: 496 HTDHLGRPEFVTSPSQQTVWKAYNYAYGRSVQKDEIGGLN--IGFPGQYYDVESGLWYNG 553 Query: 285 HRYYDPLQGRYITQDPIGLKGGWNFYQYP-LNPVQYIDSMGL 325 R YD GRY+ DPIGL GG N Y Y NPV D +GL Sbjct: 554 FRDYDASIGRYVQSDPIGLAGGLNTYAYAEGNPVTGFDPLGL 595 >UniRef50_B9XHG9 YD repeat protein n=1 Tax=bacterium Ellin514 RepID=B9XHG9_9BACT Length = 1915 Score = 73.2 bits (178), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 38/112 (33%), Positives = 63/112 (56%), Gaps = 1/112 (0%) Query: 216 TPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQYD 275 + +++ YH D G AL++ + YD +GN+L++ P L + +++ Sbjct: 1701 SASQQNAFYHADGNGNITALINAQQVIVAKYLYDPFGNILSKSGPLAEANLYQFSSKEFH 1760 Query: 276 EESGLYYNRHRYYDPLQGRYITQDPIGLKGGWNFYQYPLN-PVQYIDSMGLA 326 + SGL HRYYDP R++T+DP+G GG+N YQ+ N P++ +D GLA Sbjct: 1761 QNSGLVCYLHRYYDPNLQRWLTRDPLGELGGYNLYQFVGNDPMEGVDPFGLA 1812 >UniRef50_C5ID01 RhsK n=50 Tax=cellular organisms RepID=C5ID01_ECOLX Length = 1616 Score = 73.2 bits (178), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 47/113 (41%), Positives = 59/113 (52%), Gaps = 14/113 (12%) Query: 227 DHRGLPLALVSTEGATEWC-AEYDEWGNLLN------------EENPHQLQQLIRLPGQQ 273 D G PL L ++EG T W + WG L+ E +P L+ GQ Sbjct: 1351 DLTGRPLMLFNSEGKTVWRPGQTSLWGLALSLPADTDYPDPRGERDPEADPGLL-YAGQW 1409 Query: 274 YDEESGLYYNRHRYYDPLQGRYITQDPIGLKGGWNFYQYPLNPVQYIDSMGLA 326 D ESGL YNR RYY+P G Y+ DP+GL+GG Y+Y NP YID +GLA Sbjct: 1410 QDAESGLCYNRFRYYEPETGMYLVSDPLGLQGGEQTYRYVPNPCGYIDPLGLA 1462 >UniRef50_A9GLF7 Conserved exported carbohydrate-binding protein,Rhs family n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=A9GLF7_SORC5 Length = 773 Score = 73.2 bits (178), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 39/120 (32%), Positives = 63/120 (52%), Gaps = 4/120 (3%) Query: 207 MQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQL 266 + +D P + H D +PL LV+ +G+ + E D +G ++ + L Sbjct: 421 VAQAIDTEAGPGAWKYFVHRDGAPVPLGLVNADGSVDQVFETDAYGRVIAGD---AAATL 477 Query: 267 IRLPGQQYDEESGLYYNRHRYYDPLQGRYITQDPIGLKGGWNFYQYPLN-PVQYIDSMGL 325 +R PG Y+ E+GL+YNR RY+DP Y++ +P+GL+GG Y Y P+ +D GL Sbjct: 478 VRFPGHWYEPETGLHYNRWRYFDPASATYLSPEPLGLEGGLEAYGYVSGRPLALVDLDGL 537 >UniRef50_Q4ZU10 YD repeat n=2 Tax=Pseudomonas syringae group RepID=Q4ZU10_PSEU2 Length = 913 Score = 73.2 bits (178), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 44/115 (38%), Positives = 58/115 (50%), Gaps = 5/115 (4%) Query: 218 ARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEEN----PHQLQQLIRLPGQQ 273 + K+ H DH P + A W D +G EE+ +R PGQ Sbjct: 675 SSKLIYLHVDHLNTPRLATDSSQALLWRWNSDAYGVGSPEEDVDGDGKATTIALRFPGQI 734 Query: 274 YDEESGLYYNRHRYYDPLQGRYITQDPIGLKGGWNFYQY-PLNPVQYIDSMGLAS 327 YD ++ L YN +R Y+P GRY+ DPIGL GG N Y Y NP+ +ID MGLA+ Sbjct: 735 YDAQTQLSYNYYRDYNPDTGRYVQSDPIGLGGGLNTYAYVNANPMSFIDPMGLAA 789 >UniRef50_C6CPH2 YD repeat protein n=11 Tax=Enterobacteriaceae RepID=C6CPH2_DICZE Length = 1423 Score = 72.8 bits (177), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 43/97 (44%), Positives = 54/97 (55%), Gaps = 2/97 (2%) Query: 232 PLALVSTEGATEWCA-EYDEWGNLLNEENPHQLQQLIRLPGQQYDEESGLYYNRHRYYDP 290 P AL + +G W A + WG E++ L GQ D ESGL YNR RYYDP Sbjct: 1209 PQALFTPDGTLRWQAPKATLWGQRQAEKSESPDPGLA-FAGQLRDSESGLCYNRFRYYDP 1267 Query: 291 LQGRYITQDPIGLKGGWNFYQYPLNPVQYIDSMGLAS 327 G Y++ DPIG+ GG N Y Y NP+ +ID +GLA Sbjct: 1268 AGGCYVSPDPIGIAGGDNNYAYAPNPITWIDPLGLAG 1304 >UniRef50_Q396B9 Rhs family protein n=1 Tax=Burkholderia sp. 383 RepID=Q396B9_BURS3 Length = 1556 Score = 72.8 bits (177), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 34/96 (35%), Positives = 50/96 (52%) Query: 230 GLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEESGLYYNRHRYYD 289 G+P + G W A ++ + L+ +R PG + E+GL+ NR R Y+ Sbjct: 1203 GMPERIEDVSGRAVWLARKIHSYGVIEVAEGNSLEYDVRWPGHLFQRETGLHVNRFRSYN 1262 Query: 290 PLQGRYITQDPIGLKGGWNFYQYPLNPVQYIDSMGL 325 P+ GRY+ DP+G GG N Y Y NPV +D +GL Sbjct: 1263 PMLGRYLQSDPVGHAGGGNLYTYSANPVVEVDVLGL 1298 >UniRef50_A1AK54 YD repeat protein n=1 Tax=Pelobacter propionicus DSM 2379 RepID=A1AK54_PELPD Length = 1352 Score = 72.8 bits (177), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 42/104 (40%), Positives = 55/104 (52%), Gaps = 4/104 (3%) Query: 224 YHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEESGLYYN 283 YH D G +AL G YD +GN ++ + Q G+++D E+GLYY Sbjct: 1138 YHADGLGSIVALTDRHGTVVQEYNYDSFGNP--DQRGENIDQPFSYTGREWDRETGLYYY 1195 Query: 284 RHRYYDPLQGRYITQDPIGLKGG-WNFYQYPL-NPVQYIDSMGL 325 R RYYDP GR+I +DPI GG N Y Y L NP+ +D GL Sbjct: 1196 RARYYDPKIGRFIQKDPISFAGGDVNLYAYVLNNPINRLDPFGL 1239 >UniRef50_Q9L0E3 Putative Rhs protein n=2 Tax=Streptomyces RepID=Q9L0E3_STRCO Length = 927 Score = 72.4 bits (176), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 43/97 (44%), Positives = 53/97 (54%), Gaps = 1/97 (1%) Query: 230 GLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEESGLYYNRHRYYD 289 G P LVS +G W WG L + + +R PGQ +D E+GL+YN RYYD Sbjct: 725 GAPTELVSPDGDIGWRLRTTLWG-LPVDGSGGSTDCPLRFPGQYHDPETGLHYNYFRYYD 783 Query: 290 PLQGRYITQDPIGLKGGWNFYQYPLNPVQYIDSMGLA 326 P GRY + DP+GL GG N Y NP +ID GLA Sbjct: 784 PGLGRYCSLDPLGLAGGPNPAWYTPNPTAWIDPFGLA 820 >UniRef50_B2PW71 Putative uncharacterized protein n=1 Tax=Providencia stuartii ATCC 25827 RepID=B2PW71_PROST Length = 191 Score = 72.4 bits (176), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 34/66 (51%), Positives = 44/66 (66%) Query: 263 LQQLIRLPGQQYDEESGLYYNRHRYYDPLQGRYITQDPIGLKGGWNFYQYPLNPVQYIDS 322 +Q +R GQ +D E+GL++N R+YDP GR+I DPIGL GG N YQY NP+ +ID Sbjct: 4 FEQNLRYAGQYFDNETGLHFNTFRFYDPQIGRFIMPDPIGLLGGINLYQYAPNPLGWIDP 63 Query: 323 MGLASK 328 GLA Sbjct: 64 WGLAGN 69 >UniRef50_D1SVF0 Rhs family protein (Fragment) n=1 Tax=Acidovorax avenae subsp. avenae ATCC 19860 RepID=D1SVF0_9BURK Length = 218 Score = 72.4 bits (176), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 43/111 (38%), Positives = 54/111 (48%), Gaps = 24/111 (21%) Query: 240 GATEWCAEYDEWGNLLNE-----------------ENPHQLQQL-------IRLPGQQYD 275 G W A Y WG + E E H+ QQ +R+ GQ D Sbjct: 2 GNLVWQARYLTWGATVQEHWQAFDAAGRPVDAPVAETGHRPQQSFVLIPQNLRMQGQYLD 61 Query: 276 EESGLYYNRHRYYDPLQGRYITQDPIGLKGGWNFYQYPLNPVQYIDSMGLA 326 E+GL+YN RYYDP G + T DPIGL GG N +QY LNP+ ++D G A Sbjct: 62 RETGLHYNTFRYYDPDLGAFTTPDPIGLAGGINLHQYALNPIAWVDPWGWA 112 >UniRef50_D1YPL0 RHS repeat-associated core domain protein n=1 Tax=Veillonella parvula ATCC 17745 RepID=D1YPL0_9FIRM Length = 216 Score = 72.4 bits (176), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 39/94 (41%), Positives = 50/94 (53%), Gaps = 1/94 (1%) Query: 235 LVSTEGATEWCAEYDEWGNLLNEEN-PHQLQQLIRLPGQQYDEESGLYYNRHRYYDPLQG 293 + +G W Y WG L E Q RL Q D E+GL+YN RYY+P G Sbjct: 1 MTDKDGNLLWFGNYTGWGRLKEETKVTDSAYQPFRLQNQYCDRETGLHYNFFRYYEPDAG 60 Query: 294 RYITQDPIGLKGGWNFYQYPLNPVQYIDSMGLAS 327 R++ QDPIGL+GG N Y + N +ID +GL S Sbjct: 61 RFVNQDPIGLEGGDNIYLFSPNIQSWIDPLGLLS 94 >UniRef50_A3RZQ8 Core protein n=21 Tax=Ralstonia solanacearum RepID=A3RZQ8_RALSO Length = 782 Score = 72.0 bits (175), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 47/120 (39%), Positives = 59/120 (49%), Gaps = 7/120 (5%) Query: 213 PVYTPARKIHLY-HCDHRGLPLALVSTEGATEW-CAEYDEWGNLLNEENPHQLQQLI--- 267 PV T Y + D P + T W + D +G L +ENP L Sbjct: 504 PVVTIKNATPYYIYADQIDTPRVITDTNNLMVWRWDQTDPFGATLPDENPTSLGAFTYNP 563 Query: 268 RLPGQQYDEESGLYYNRHRYYDPLQGRYITQDPIGLKGG-WNFYQY-PLNPVQYIDSMGL 325 R PGQ YD+E+G +YN +R YDP GRY+ DPIGL GG W+ Y Y P +Y D GL Sbjct: 564 RFPGQVYDQETGKHYNANRDYDPASGRYVQSDPIGLNGGQWSTYAYVDGQPTRYTDPKGL 623 >UniRef50_B4SL73 YD repeat protein n=4 Tax=Stenotrophomonas maltophilia RepID=B4SL73_STRM5 Length = 1577 Score = 72.0 bits (175), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 41/110 (37%), Positives = 56/110 (50%), Gaps = 8/110 (7%) Query: 227 DHRGLPLALVSTE---GATEWCAEYDEWGNLLNEENPH----QLQQLIRLPGQQYDEESG 279 DH G P ++ EW + + +GN + +P + +R PGQQ + SG Sbjct: 1331 DHLGTPRVVIDPARDVAIWEWSNKSEVFGNQIPSTDPDGDGVAFELALRFPGQQATDASG 1390 Query: 280 LYYNRHRYYDPLQGRYITQDPIGLKGGWNFYQY-PLNPVQYIDSMGLASK 328 L+YN R YDP GRY DPIGL GG N + Y +P +D +GLA K Sbjct: 1391 LFYNYRREYDPAVGRYTQSDPIGLMGGLNSFAYGSGDPTGRVDPLGLADK 1440 >UniRef50_A9GIJ6 Conserved carbohydrate-binding protein, Rhs family n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=A9GIJ6_SORC5 Length = 1429 Score = 72.0 bits (175), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 42/103 (40%), Positives = 55/103 (53%), Gaps = 2/103 (1%) Query: 224 YHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEESGLYYN 283 Y D G P L+ G + WG E + + +R GQ YD+E+GL YN Sbjct: 1045 YLNDPVGRPERLLDAAGNVACELDRTVWGAARPREGA-RTETPLRFLGQYYDDETGLAYN 1103 Query: 284 RHRYYDPLQGRYITQDPIGLKGGWNFYQYPLN-PVQYIDSMGL 325 R+RYYDP GRYI+ DP+GL GG N + Y N P + +D GL Sbjct: 1104 RYRYYDPAVGRYISVDPVGLLGGQNGFSYAGNRPTKMVDPTGL 1146 >UniRef50_B9M2L6 YD repeat protein n=6 Tax=Geobacter sp. FRC-32 RepID=B9M2L6_GEOSF Length = 1348 Score = 71.6 bits (174), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 86/316 (27%), Positives = 123/316 (38%), Gaps = 42/316 (13%) Query: 15 YRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYLYDP 74 Y YD +G +T T+ + D+ + Y YDS RL T P + YD Sbjct: 941 YGYDANGNITAITNTL-------DNTKNKSYTYDSLDRLGSGT-----GPWGTITWTYDG 988 Query: 75 LGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQPGSFTPL 134 +G R + + D +G S S Y +RLT I T P +F Sbjct: 989 VGNR------QTQIDSSGTSSYS-------YQSGSNRLTGI--------TGANPATFGYD 1027 Query: 135 IRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSEESR 194 TAT E K + L Q+ + GS + Q + + + + ++ Sbjct: 1028 TNGNTAT-ENGKIYTYNQNQRLIQAAANETGSYSYN-AQGQRTKKTVNGVTTYFIFDQQG 1085 Query: 195 RWL---ASCGLTVEQMQNQMDPVY-TPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDE 250 + L A+ G E + P+ A + H DH G P + W E Sbjct: 1086 QLLTESATNGTQAEYIYLSNQPLAKIDATGTNYVHTDHLGTPTMMTDAAATKVWEIEARP 1145 Query: 251 WGNLLNEENPHQLQQLIRLPGQQYDEESGLYYNRHRYYDPLQGRYITQDPIGLKGGWNFY 310 +G+ N L +R PGQ D ESGL YN R Y+P GRYI DP+GL G + Sbjct: 1146 FGDSANITGTASLN--LRFPGQYADSESGLNYNYFRDYNPGIGRYIQADPVGLDEGVTLF 1203 Query: 311 QYPLN-PVQYIDSMGL 325 Y N P+ D +GL Sbjct: 1204 IYSGNDPILNEDPLGL 1219 >UniRef50_C1B7W9 Putative uncharacterized protein n=1 Tax=Rhodococcus opacus B4 RepID=C1B7W9_RHOOB Length = 514 Score = 70.9 bits (172), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 89/340 (26%), Positives = 129/340 (37%), Gaps = 70/340 (20%) Query: 4 DNRIARDA----HYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHY--T 57 D+ I RDA H + D GR+T + D T +Y YD + Sbjct: 124 DHNIRRDAIDAVHRSFDLDPAGRIT---------AVVQDGHPTEQYSYDPLGNITDSGSD 174 Query: 58 RTQYAEPLV----ESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLT 113 R +Y L+ +R+ YD +GR + K R S P V W+ Sbjct: 175 RREYLGNLLVRDGRTRFHYDAVGRLIRKTTTRP----------SHAPDV-WH-------- 215 Query: 114 TIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVL 173 Y+ +F L V T G +L + + G+V ++ Sbjct: 216 ------------YRYNAFDQLTDVTTPDGPHWHYTYDALGRRTTKHRLDHDGAVAVAELI 263 Query: 174 VQMLDRLESEILADRVSEESRRWLASCG----LTVEQMQNQMDPVYTPARKIHLYHCDHR 229 D + +L + + RW G LT Q +D + + D Sbjct: 264 RYTWD--GTHLLEQTAGDTTTRWTYQHGSYTPLTQAVDQGSVD------AEFYAIVTDLV 315 Query: 230 GLPLALVSTEGATEWC-AEYDEWGNLL--NEENPHQLQQLIRLPGQQYDEESGLYYNRHR 286 G P+ LV A A D WG+ + H +R PGQ +D E+GL+YN HR Sbjct: 316 GTPVELVDPRTADSVADATTDLWGHTTWRGATDTH-----LRFPGQYHDPETGLHYNLHR 370 Query: 287 YYDPLQGRYITQDPIGLKGGWNFYQYPLNPVQYIDSMGLA 326 YY+P RY+TQDP+GL N YP NP + D +GL Sbjct: 371 YYNPHTARYLTQDPLGLAPSPNPNTYPHNPTGWTDPLGLV 410 >UniRef50_B8FIJ1 YD repeat protein n=1 Tax=Desulfatibacillum alkenivorans AK-01 RepID=B8FIJ1_DESAA Length = 1630 Score = 70.9 bits (172), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 43/118 (36%), Positives = 57/118 (48%), Gaps = 19/118 (16%) Query: 224 YHCDHRGLPLALVSTEGATEWCAEYDEWGNLL------------NEENPHQLQQLIRLPG 271 YH D G +AL + GA Y +G + NE NP G Sbjct: 1309 YHADVLGSTIALTDSTGAVVETYRYTPYGQVSFFDGNGSSISQSNESNP------FLFTG 1362 Query: 272 QQYDEESGLYYNRHRYYDPLQGRYITQDPIGLKGGWNFYQYPL-NPVQYIDSMGLASK 328 Q+YDEE+GLYY R RY P GR++ DP G G N Y+Y + NP +Y+D G A++ Sbjct: 1363 QRYDEETGLYYYRARYLHPELGRFLNPDPKGFVDGMNLYEYAMSNPARYVDPRGTATE 1420 >UniRef50_C3JCI6 Rhs family protein n=4 Tax=Bacteria RepID=C3JCI6_9PORP Length = 1387 Score = 70.9 bits (172), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 41/109 (37%), Positives = 54/109 (49%), Gaps = 9/109 (8%) Query: 226 CDHRGLPLALVSTEGATEWCAEYDEWGNLLNEEN---PHQLQQLIRLPGQQYDEESGLYY 282 D+ G P + GA W D +G + ++ P Q GQ +DEE L Y Sbjct: 1182 TDYLGTPTHAFDSHGAKVWERNLDIYGKIRTGDSTLVPFLFQ------GQYFDEEIDLCY 1235 Query: 283 NRHRYYDPLQGRYITQDPIGLKGGWNFYQYPLNPVQYIDSMGLASKYGH 331 NR RYYDP G YI+QDPI + G N Y Y + +ID GL+ +GH Sbjct: 1236 NRFRYYDPSTGTYISQDPISIAGRLNVYAYVHDSNSWIDPFGLSGTHGH 1284 >UniRef50_A8ZTS1 YD repeat protein n=4 Tax=Desulfococcus oleovorans Hxd3 RepID=A8ZTS1_DESOH Length = 1935 Score = 70.5 bits (171), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 41/117 (35%), Positives = 59/117 (50%), Gaps = 2/117 (1%) Query: 216 TPARKIHLYHCDHRGLPLALVSTEGATEWCA-EYDEWGNLLNEENPHQLQQLIRLPGQQY 274 T +LY D G +VS T A EY +G L+++ + + R + + Sbjct: 1644 TDGVNTYLYCHDANGNVGRMVSAADGTVAAAYEYAPFGGLIHKSGVMADENVFRFSTKYW 1703 Query: 275 DEESGLYYNRHRYYDPLQGRYITQDPIGLKGGWNFYQYPLN-PVQYIDSMGLASKYG 330 D ESGLY RYYDP GR+I++DP+G GG N Y + +N P + D +GL G Sbjct: 1704 DGESGLYEYGLRYYDPETGRWISRDPVGESGGLNLYSFVMNDPTNFFDLLGLVQVGG 1760 >UniRef50_C2LFQ4 Putative uncharacterized protein n=1 Tax=Proteus mirabilis ATCC 29906 RepID=C2LFQ4_PROMI Length = 214 Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 37/75 (49%), Positives = 46/75 (61%) Query: 257 EENPHQLQQLIRLPGQQYDEESGLYYNRHRYYDPLQGRYITQDPIGLKGGWNFYQYPLNP 316 E +P+ + R GQ DEESGLYYNR RYYD G+Y++ DPIGL GG N Y Y P Sbjct: 12 ENDPNYTECPFRFAGQYEDEESGLYYNRFRYYDRETGQYLSPDPIGLLGGLNPYGYVHCP 71 Query: 317 VQYIDSMGLASKYGH 331 ++D GLA G+ Sbjct: 72 TGWVDPFGLAGGKGN 86 >UniRef50_C7MZM5 Rhs family protein n=1 Tax=Saccharomonospora viridis DSM 43017 RepID=C7MZM5_SACVD Length = 1259 Score = 70.1 bits (170), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 88/334 (26%), Positives = 125/334 (37%), Gaps = 104/334 (31%) Query: 7 IARDAHYLYRYDRHGRLT----EKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYA 62 I R Y +D GR+ ++ PE T RY +++ RL+ A Sbjct: 897 IRRAGKVRYEHDAQGRIILRQRKRLSRKPE---------TWRYFWNADDRLIEVLTPNGA 947 Query: 63 EPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTT------IQ 116 RY YDPLGRRVAK+ R D +G + Q+ + WDG L + Sbjct: 948 R----WRYRYDPLGRRVAKQ--RLTPDGSGVLE-----QIE-FTWDGAVLAEQAHTDGVA 995 Query: 117 N-----DRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPP 171 N DR + Y+PG+F PL++ E R L + QQ E S+V Sbjct: 996 NGPRLADRRVMVWDYEPGTFRPLVQRE----------RSQLRNAPQQWFDEQFYSIV--- 1042 Query: 172 VLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGL 231 D V TP I+++ Sbjct: 1043 ---------------------------------------TDIVGTPTELINIH------- 1056 Query: 232 PLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEESGLYYNRHRYYDPL 291 G W WG + +++ +R PGQ D E+G YN R+YDP Sbjct: 1057 --------GGIAWYHRTTLWG-ITTDQSRTGAYTPLRFPGQYADPETGFNYNFQRHYDPA 1107 Query: 292 QGRYITQDPIGLKGGWNFYQYPLNPVQYIDSMGL 325 RY DP+GL GG++ + Y NP +ID +GL Sbjct: 1108 SARYAGTDPLGLVGGFDPHSYVWNPYAWIDPLGL 1141 >UniRef50_C2M343 Rhs family protein n=2 Tax=Capnocytophaga gingivalis ATCC 33624 RepID=C2M343_CAPGI Length = 336 Score = 69.7 bits (169), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 46/121 (38%), Positives = 58/121 (47%), Gaps = 15/121 (12%) Query: 215 YTPARKI-----HLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEEN---PHQLQQL 266 + PA K+ + DH G P G W E D +GN + ++ P Q Sbjct: 99 FVPAAKLVGDKSYSILTDHLGTPYEAYDENGEKVWARELDLYGNAIAGDSSFIPFLYQ-- 156 Query: 267 IRLPGQQYDEESGLYYNRHRYYDPLQGRYITQDPIGLKGGW-NFYQYPLNPVQYIDSMGL 325 GQ YDEE GL YNR RYY P G YI+QDPI L G NFY Y + +D +GL Sbjct: 157 ----GQYYDEEIGLAYNRFRYYSPESGTYISQDPIRLAGNNPNFYGYTFDSNTEVDVLGL 212 Query: 326 A 326 + Sbjct: 213 S 213 >UniRef50_B4UB58 RHS protein n=1 Tax=Anaeromyxobacter sp. K RepID=B4UB58_ANASK Length = 572 Score = 69.7 bits (169), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 51/148 (34%), Positives = 70/148 (47%), Gaps = 22/148 (14%) Query: 210 QMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENP-----HQLQ 264 Q++ + A + + +H DH G+P AL S EGAT W A +G + P + Sbjct: 96 QLEYAPSAAPRPYYFHLDHIGMPRALSSLEGATVWSAATKPYGEVSETMTPDPVTGRPIV 155 Query: 265 QLIRLPGQQYDEE-------SGLYYNRHRYYDPLQGRYITQDPIGLKGGWN--------F 309 +RLPG QYDE G YYN R+Y P GRY+ DPI L GG+N + Sbjct: 156 TNLRLPG-QYDERLLRSVGLQGPYYNWSRWYLPGVGRYLELDPIALAGGFNGIGWFAPDW 214 Query: 310 YQY-PLNPVQYIDSMGLASKYGHLNNGG 336 Y Y NP+++ D S+ N G Sbjct: 215 YNYGGGNPLRWTDPTAYRSRIQSRTNAG 242 >UniRef50_B2Q762 Putative uncharacterized protein n=2 Tax=Providencia stuartii ATCC 25827 RepID=B2Q762_PROST Length = 173 Score = 69.3 bits (168), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 35/74 (47%), Positives = 46/74 (62%), Gaps = 4/74 (5%) Query: 263 LQQLIRLPGQQYDEESGLYYNRHRYYDPLQGRYITQDPIGLKGGWNFYQYPLNPVQYIDS 322 +Q +R GQ +D E+GL++N R+YDP GR+I DPIGL GG N Y Y NP+ +ID Sbjct: 4 FEQNLRYAGQYFDNETGLHFNTFRFYDPQIGRFIMPDPIGLLGGINLYAYAPNPLGWIDP 63 Query: 323 MGLASKYGHLNNGG 336 G + HLN G Sbjct: 64 WG----WSHLNTNG 73 >UniRef50_A9EZF2 Conserved carbohydrate-binding protein, Rhs family n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=A9EZF2_SORC5 Length = 1352 Score = 69.3 bits (168), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 35/109 (32%), Positives = 55/109 (50%), Gaps = 3/109 (2%) Query: 221 IHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQ---LQQLIRLPGQQYDEE 277 I+ DH G L+ EG W A + +G + P + RL GQ +DEE Sbjct: 1061 IYAVVTDHVGTTTELIGPEGEVAWSAHHSAFGIITEAARPKGGPLVASPFRLLGQYHDEE 1120 Query: 278 SGLYYNRHRYYDPLQGRYITQDPIGLKGGWNFYQYPLNPVQYIDSMGLA 326 + L Y R+RY+DP R+++ DP+ L G N + + +P + D +GL+ Sbjct: 1121 TELCYVRYRYFDPKTARFLSPDPLELFGSRNLFAFDGSPTTHADPLGLS 1169 >UniRef50_D2U9B6 Putative rhs family protein n=1 Tax=Xanthomonas albilineans RepID=D2U9B6_XANAL Length = 1547 Score = 68.9 bits (167), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 52/148 (35%), Positives = 73/148 (49%), Gaps = 13/148 (8%) Query: 191 EESRRWLA---SCGLTVEQMQNQMD-PVYTPARK-IHLYHCDHRGLPLALVSTE---GAT 242 +E+ WL S G V+Q D PV +K ++ DH G P A++ + Sbjct: 1275 DEAGHWLGDYDSNGAAVQQAIWLDDLPVGVVVKKSVNYIEPDHLGTPRAVIDSVRDIAIW 1334 Query: 243 EWCAEYDEWGNLLNEENPHQ----LQQLIRLPGQQYDEESGLYYNRHRYYDPLQGRYITQ 298 W + + +GN ++P + +R PGQ+YD SGL N R YD GRY+ Sbjct: 1335 RWDMKGEAFGNTPPNQDPDKDGTAFVFNLRFPGQRYDTLSGLNQNYFRDYDTSGGRYVQS 1394 Query: 299 DPIGLKGGWNFYQYPL-NPVQYIDSMGL 325 DPIGL GG N Y Y + NP+ Y D+ GL Sbjct: 1395 DPIGLVGGLNTYAYVMGNPLMYTDAGGL 1422 >UniRef50_C6M9F8 RhsG core protein with extension n=1 Tax=Neisseria sicca ATCC 29256 RepID=C6M9F8_NEISI Length = 194 Score = 68.9 bits (167), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 38/95 (40%), Positives = 51/95 (53%), Gaps = 1/95 (1%) Query: 235 LVSTEGATEWCAEYDEWGNLLNE-ENPHQLQQLIRLPGQQYDEESGLYYNRHRYYDPLQG 293 + +G W Y WG L E + Q RL Q D E+GL+YN RYY+ G Sbjct: 1 MTDKDGNLLWFGNYTGWGRLKEEIKVTDSAYQPFRLQNQYADPETGLHYNFFRYYESDAG 60 Query: 294 RYITQDPIGLKGGWNFYQYPLNPVQYIDSMGLASK 328 R++ QDPIGL GG N YQ+ N +++ D+ GL K Sbjct: 61 RFVNQDPIGLWGGSNSYQFAPNTLKWTDTWGLLPK 95 >UniRef50_UPI000196D8DA RHS family protein n=1 Tax=Neisseria mucosa ATCC 25996 RepID=UPI000196D8DA Length = 180 Score = 68.9 bits (167), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 31/60 (51%), Positives = 41/60 (68%) Query: 269 LPGQQYDEESGLYYNRHRYYDPLQGRYITQDPIGLKGGWNFYQYPLNPVQYIDSMGLASK 328 + Q D E+GL+YN RYY+P GR++ QDPIGL GG N Y + LN ++D +GLASK Sbjct: 1 MQNQYADCETGLHYNFFRYYEPDAGRFVNQDPIGLLGGENLYAFGLNTKAWMDPLGLASK 60 >UniRef50_C9PMJ2 Substrate-binding repeat protein n=2 Tax=Pasteurella dagmatis ATCC 43325 RepID=C9PMJ2_9PAST Length = 142 Score = 68.6 bits (166), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 36/90 (40%), Positives = 49/90 (54%), Gaps = 14/90 (15%) Query: 268 RLPGQQYDEESGLYYNRHRYYDPLQGRYITQDPIGLKGGWNFYQYPLNPVQYIDSMGLAS 327 R GQ YDEES L+Y R RYY P G+Y++ D IGL+GG+N Y Y +P ++D +GL Sbjct: 26 RFAGQYYDEESELHYKRFRYYSPETGQYLSHDLIGLQGGFNPYGYVFDPTGWVDVLGL-- 83 Query: 328 KYGHLNNGGYGARPNKPPTPDPSKLPDIAK 357 +P PP PS D+ + Sbjct: 84 ------------KPKIPPFDAPSLESDVVR 101 >UniRef50_A9C2L0 Putative uncharacterized protein n=1 Tax=Delftia acidovorans SPH-1 RepID=A9C2L0_DELAS Length = 187 Score = 68.6 bits (166), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 45/123 (36%), Positives = 61/123 (49%), Gaps = 8/123 (6%) Query: 267 IRLPGQQYDEESGLYYNRHRYYDPLQGRYITQDPIGLKGGWNFYQYPL-NPVQYIDSMGL 325 +R PGQ +DEE+GL YN HRYYD GRY+ DPIGL+ GWN + Y NP+ +D GL Sbjct: 65 LRYPGQVFDEETGLSYNLHRYYDAATGRYMQADPIGLEDGWNRFGYVANNPLNDVDPQGL 124 Query: 326 ASKYGHLNN-----GGYGA-RPNKPPTPDPSKLPDIAKQLRLPYPIDQASSAPNVFKTFF 379 + G GA P P + P+ KQ++ P+D N + F Sbjct: 125 HPLLTRMQGLYYRYGWQGAVNPGTPSKLQLRQAPE-DKQVQDTIPVDMRGKRKNQIRLAF 183 Query: 380 RAL 382 + Sbjct: 184 ICI 186 >UniRef50_Q8XSL8 Putative rsh-related protein n=1 Tax=Ralstonia solanacearum RepID=Q8XSL8_RALSO Length = 319 Score = 68.6 bits (166), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 42/109 (38%), Positives = 57/109 (52%), Gaps = 6/109 (5%) Query: 225 HCDHRGLPLALVSTEGATEW-CAEYDEWGNLLNEENPHQLQQLI---RLPGQQYDEESGL 280 + D P + T W + D +G L +ENP L R PGQ YD E+G Sbjct: 57 YADQIDTPRVITDTNNLMVWRWDQADPFGATLPDENPTSLGTFAYNPRFPGQVYDAETGK 116 Query: 281 YYNRHRYYDPLQGRYITQDPIGLKGGW-NFYQY-PLNPVQYIDSMGLAS 327 +YN +R YDP+ GRY+ DPIGL GG + Y Y +P+ +ID GL + Sbjct: 117 HYNANRDYDPVSGRYVQSDPIGLNGGQPSTYAYVDSDPLGFIDPEGLGA 165 >UniRef50_B4V6T6 Rhs protein n=2 Tax=Streptomyces RepID=B4V6T6_9ACTO Length = 1263 Score = 68.6 bits (166), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 39/96 (40%), Positives = 48/96 (50%), Gaps = 1/96 (1%) Query: 230 GLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEESGLYYNRHRYYD 289 G P LV GA W WG + + L R PGQ +D ESGL+YN RYYD Sbjct: 1028 GTPTELVDEAGAIAWRTRSTLWGATTWNADANAYTPL-RFPGQYFDPESGLHYNCFRYYD 1086 Query: 290 PLQGRYITQDPIGLKGGWNFYQYPLNPVQYIDSMGL 325 P RY++ DP+GL N Y NP + D +GL Sbjct: 1087 PETARYLSVDPLGLGPAPNPVAYVSNPHSWSDPLGL 1122 >UniRef50_C5B3X8 Putative uncharacterized protein n=1 Tax=Methylobacterium extorquens AM1 RepID=C5B3X8_METEA Length = 666 Score = 68.2 bits (165), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 72/284 (25%), Positives = 120/284 (42%), Gaps = 41/284 (14%) Query: 42 THRYHYDSQHRLVHYTRTQYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQ 101 T R+ YD RL+ T P Y YD +G R+++ R ++G ++ Q Sbjct: 268 TQRFSYDDTGRLLTAT-----GPYGSLSYTYDIVGNRLSE-----VRTISGAITT----Q 313 Query: 102 VTWYGWDGDRLTTIQNDRTRIQTIY--QPGSFTPLIRVETA----TGELAKTQRRSLADT 155 Y +RL+++ T +++ GS T R TA + + + S+ + Sbjct: 314 SYAYPATSNRLSSVSQGGTALRSFAYDAAGSVTSDTRSGTAYAYTISQAGRIAQVSVGGS 373 Query: 156 LQQSGGEDGGS--------VVFPPVLVQMLDRLESEILADR--VSEESRR--WLASCGLT 203 ++ + DG + + P ++ + +L + + R WL + Sbjct: 374 VKANYLYDGRNRLSVRQTLNMTPSGTTHLIHDVWDHVLVETNGAGQAVREYIWLGDLPVA 433 Query: 204 VEQMQNQMDPVYTPARKIHLY-HCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQ 262 V +D TP L+ H DH G P L + +W A+Y+ +G + + P Sbjct: 434 V------LDGSATPTNPTLLWVHADHLGRPELLTDASKSIKWKAQYEPFGTVWSITGPAA 487 Query: 263 LQQLIRLPGQQYDEESGLYYNRHRYYDPLQGRYITQDPIGLKGG 306 LQ +R PGQ + ESGL YN R+YD GRY DP+G+ G Sbjct: 488 LQ--MRFPGQWFQIESGLAYNWWRHYDSTLGRYTQVDPMGINQG 529 >UniRef50_C0FSB7 Putative uncharacterized protein n=1 Tax=Roseburia inulinivorans DSM 16841 RepID=C0FSB7_9FIRM Length = 306 Score = 68.2 bits (165), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 44/111 (39%), Positives = 52/111 (46%), Gaps = 11/111 (9%) Query: 226 CDHRGLPLALVSTEGATEWCAEYDEWGNLLNE----------ENPHQLQQLIRLPGQQYD 275 D+ G P+ EG W E D +G + N E Q R GQ D Sbjct: 120 SDYLGTPVEAYDGEGIKVWERELDIYGRVKNVGKGSDRSAAPETGEQCFIPFRFQGQYED 179 Query: 276 EESGLYYNRHRYYDPLQGRYITQDPIGLKGGW-NFYQYPLNPVQYIDSMGL 325 +E GLYYNR RYYDP G+Y QDPIGL GG Y Y N + +D GL Sbjct: 180 KEIGLYYNRFRYYDPSLGQYTQQDPIGLAGGNPTLYGYVFNTMWELDPFGL 230 >UniRef50_A7BNN3 Putative uncharacterized protein n=1 Tax=Beggiatoa sp. SS RepID=A7BNN3_9GAMM Length = 212 Score = 67.4 bits (163), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 39/103 (37%), Positives = 56/103 (54%), Gaps = 6/103 (5%) Query: 224 YHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEESGLYYN 283 Y DH G P L+ ++G W A Y+ +G + N ++ +R GQ +D E+ L+YN Sbjct: 18 YQTDHLGTPQKLIDSQGNVVWAAVYEAFGKARVDVN--LVENHLRFAGQYFDSETRLHYN 75 Query: 284 RHRYYDPLQGRYITQDPIGLKGGWNFYQYPL-NPVQYIDSMGL 325 +RYY+P GRY+ DPI N Y Y NP+ Y+D GL Sbjct: 76 YYRYYEPTIGRYLRVDPI---PSVNQYAYVSGNPLSYVDPFGL 115 >UniRef50_Q2Y6N6 RhsD protein n=1 Tax=Nitrosospira multiformis ATCC 25196 RepID=Q2Y6N6_NITMU Length = 187 Score = 67.4 bits (163), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 38/72 (52%), Positives = 43/72 (59%), Gaps = 4/72 (5%) Query: 257 EENPHQLQQL---IRLPGQQYDEESGLYYNRHRYYDPLQGRYITQDPIGLKGGWNFYQY- 312 +NP L +R PGQ +D E+GLYYN R YDP GRYI DPIGL GG N Y Y Sbjct: 10 NQNPSGLGTFSYNLRYPGQYHDAETGLYYNYFRDYDPKTGRYIQSDPIGLVGGINTYAYV 69 Query: 313 PLNPVQYIDSMG 324 NPV +DS G Sbjct: 70 EGNPVSKVDSTG 81 >UniRef50_D1YPL2 RHS repeat-associated core domain protein n=1 Tax=Veillonella parvula ATCC 17745 RepID=D1YPL2_9FIRM Length = 206 Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 27/52 (51%), Positives = 42/52 (80%) Query: 277 ESGLYYNRHRYYDPLQGRYITQDPIGLKGGWNFYQYPLNPVQYIDSMGLASK 328 E+GL+YN RYY+P GR++ QDPIGL+GG+NFY++ N +++D +GLA++ Sbjct: 17 ETGLHYNFFRYYEPDAGRFVNQDPIGLEGGFNFYRFAPNAQEWVDPLGLATR 68 >UniRef50_B4UIF2 YD repeat protein n=1 Tax=Anaeromyxobacter sp. K RepID=B4UIF2_ANASK Length = 2350 Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 38/103 (36%), Positives = 54/103 (52%), Gaps = 4/103 (3%) Query: 224 YHCDHRGLP-LALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEESGLYY 282 + DH G P L + ++ GA +YDEWG +L + NP Q G YD ++GL Sbjct: 2124 FLTDHLGSPRLVVNASTGAVVQRIDYDEWGQVLADSNPGF--QPFGFAGGLYDRDTGLVR 2181 Query: 283 NRHRYYDPLQGRYITQDPIGLKGGWNFYQYPL-NPVQYIDSMG 324 R YDP GR+ +D +GG NFY+Y +PV ++D G Sbjct: 2182 FGARDYDPTVGRWTAKDRSRFRGGLNFYEYAASDPVNFVDPTG 2224 >UniRef50_Q2Y592 Peptidase C39, bacteriocin processing n=1 Tax=Nitrosospira multiformis ATCC 25196 RepID=Q2Y592_NITMU Length = 1599 Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 58/182 (31%), Positives = 82/182 (45%), Gaps = 25/182 (13%) Query: 189 VSEESRRWLASCGLTVEQMQNQMDPV---YTP-------ARKIHLYHCDHRG-LPLALVS 237 ++E W CG T+ Q + D V Y P + Y DH G + + + Sbjct: 1316 ITETRHLW---CGATLCQARTAGDVVTRRYYPQGMAIPQGGTLLYYGTDHLGSVRDVMAA 1372 Query: 238 TEGATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEESGLYYNRHRYYDPLQGRYIT 297 GA +YD +GN + ++ R G Y ++SGLY R YDP ++++ Sbjct: 1373 QNGAKVASYDYDPYGNQI--AGSGRISVDFRYAGMFYHQQSGLYLTNFRAYDPKTAKWLS 1430 Query: 298 QDPIGLKGGWNFYQY-PLNPVQYIDSMGLASKYGHLNNGGYGARPNKPPTPDPSKLPDIA 356 +DPIG KGG N Y Y NP+ ID +GL + L G + TPDPS DIA Sbjct: 1431 RDPIGEKGGLNLYGYVGGNPINMIDPLGLRALPWIL-----GGASSDIATPDPS---DIA 1482 Query: 357 KQ 358 Q Sbjct: 1483 WQ 1484 >UniRef50_B3YAC7 YD repeat protein n=3 Tax=Salmonella enterica RepID=B3YAC7_SALET Length = 1499 Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 41/106 (38%), Positives = 55/106 (51%), Gaps = 4/106 (3%) Query: 230 GLPLALVSTEGATEWCAEYDEWG-NLLNEENPHQLQQL-IRLPGQQYDEESGLYYNRHRY 287 G P + S G W + WG + N+ +P + GQ DEESGL+YN HRY Sbjct: 1281 GAPQEMYSANGRKVWRRQRSLWGQSAANDASPDGRESCDAGFMGQWQDEESGLWYNLHRY 1340 Query: 288 YDPLQGRYITQDPIGLKGGWNFYQYPLNPVQYIDSMGLASKYGHLN 333 D G Y++QDP+ L GG N Y +PV + D +GL K G +N Sbjct: 1341 MDSRTGHYLSQDPLKLGGGLNTQSYVHDPVGWCDPLGL--KCGGVN 1384 >UniRef50_UPI0001BC9640 YD repeat-containing protein n=1 Tax=Pseudomonas syringae pv. tabaci ATCC 11528 RepID=UPI0001BC9640 Length = 920 Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 44/134 (32%), Positives = 62/134 (46%), Gaps = 18/134 (13%) Query: 218 ARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEEN----PHQLQQLIRLPGQQ 273 + K+ H DH P + A W D +G EE+ +R PGQ Sbjct: 667 SSKLIYLHVDHLNTPRLATDSTQALLWRWNSDAYGVGSPEEDVDGDGKATTIALRFPGQI 726 Query: 274 YDEESGLYYNRHRYYDPLQGRYITQDPIGLKGGWNFYQY-PLNPVQYIDSMGL------- 325 YD ++ L YN +R Y+P GRY DPIGL GG N Y Y NP+ ++D +GL Sbjct: 727 YDAQTQLSYNYYRDYNPDTGRYAQSDPIGLNGGLNTYGYVKGNPLSFVDPLGLETMVTVW 786 Query: 326 ------ASKYGHLN 333 +S +GH++ Sbjct: 787 QPVGFGSSSFGHVS 800 >UniRef50_UPI0001BC9B6D Rhs family protein n=2 Tax=Pseudomonas syringae group RepID=UPI0001BC9B6D Length = 161 Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 29/42 (69%), Positives = 34/42 (80%) Query: 286 RYYDPLQGRYITQDPIGLKGGWNFYQYPLNPVQYIDSMGLAS 327 RYYDP GR+ITQDPIGL GG+N YQY LNP+++ID GLA Sbjct: 3 RYYDPEIGRFITQDPIGLAGGYNLYQYNLNPIRWIDVTGLAG 44 >UniRef50_B8FCM0 YD repeat protein n=1 Tax=Desulfatibacillum alkenivorans AK-01 RepID=B8FCM0_DESAA Length = 1448 Score = 66.2 bits (160), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 40/100 (40%), Positives = 57/100 (57%), Gaps = 5/100 (5%) Query: 227 DHRGLPLALVSTEG-ATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEESGLYYNRH 285 + RG AL++ G A W A YD +GNLL+ N Q R ++YDEE+GLYY Sbjct: 1180 NARGDVTALLNATGNACAWYA-YDPYGNLLH--NTGAPVQPFRFSTKEYDEETGLYYFGR 1236 Query: 286 RYYDPLQGRYITQDPIGLKGGWNFYQYP-LNPVQYIDSMG 324 R+Y P+ R++T+DP G N Y++ NP+ Y D +G Sbjct: 1237 RFYSPVMARWLTRDPKGEGASLNLYEFSRSNPLAYFDPLG 1276 >UniRef50_UPI0001B4DD67 Rhs protein n=1 Tax=Streptomyces hygroscopicus ATCC 53653 RepID=UPI0001B4DD67 Length = 1730 Score = 66.2 bits (160), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 89/316 (28%), Positives = 121/316 (38%), Gaps = 83/316 (26%) Query: 15 YRYDRHGRLTEKTDL-IPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVES-RYLY 72 Y YD GR T + +P R D T RY +D++ RL T+ P + Y Y Sbjct: 1373 YEYDAAGRTTLRQKARLP----RKPD--TWRYTWDTEDRL-----TRVVTPDGTTWHYRY 1421 Query: 73 DPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQPGSFT 132 DPLGRR AK+ R D T ++ + + TW+G +T D T Q + T Sbjct: 1422 DPLGRRTAKQ--RLAADGT----VAEETRFTWHGATLIEQSTTSTDWTGRQNLTWDHDET 1475 Query: 133 PLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSEE 192 LI LA+T R + A Sbjct: 1476 GLI-------PLAQTTRYAPA--------------------------------------- 1489 Query: 193 SRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWG 252 V+ Q+++D + + D G P LV G T W + WG Sbjct: 1490 -----------VDTPQDEID------TRFYAIITDLVGTPTHLVDDTGHTAWQSRTTLWG 1532 Query: 253 NLLNEENPHQLQQLIRLPGQQYDEESGLYYNRHRYYDPLQGRYITQDPIGLKGGWNFYQY 312 + L R PGQ +D E+G +YN HR+YDP RY+T DP+GL N Y Sbjct: 1533 TTTWNTDAAAYIPL-RFPGQYHDLETGHHYNLHRHYDPETARYLTPDPLGLAPAPNPTTY 1591 Query: 313 PLNPVQYIDSMGLASK 328 NP + D GLA K Sbjct: 1592 VHNPHVWADPDGLAPK 1607 >UniRef50_D1YPK5 RHS repeat-associated core domain protein n=1 Tax=Veillonella parvula ATCC 17745 RepID=D1YPK5_9FIRM Length = 158 Score = 65.9 bits (159), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 34/67 (50%), Positives = 45/67 (67%), Gaps = 1/67 (1%) Query: 272 QQYDEESGLYYNRHRYYDPLQGRYITQDPIGLKGGWNFYQYPLNPVQYIDSMGLASKY-G 330 Q +DEE+ L+YN RYY+P GR++ QDPIGL GG N YQ+ N +ID GLA + G Sbjct: 4 QYFDEETWLHYNLMRYYEPEAGRFVNQDPIGLLGGDNLYQFAPNMQGWIDVWGLAKIFRG 63 Query: 331 HLNNGGY 337 ++GGY Sbjct: 64 MKDDGGY 70 >UniRef50_D1W844 RHS repeat-associated core domain protein (Fragment) n=1 Tax=Prevotella buccalis ATCC 35310 RepID=D1W844_9BACT Length = 186 Score = 65.9 bits (159), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 37/100 (37%), Positives = 51/100 (51%), Gaps = 2/100 (2%) Query: 227 DHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEESGLYYNRHR 286 D+ G P+ + ++G W D +G++L R GQ D+++GLYYNR R Sbjct: 27 DYLGTPIQALDSKGEVVWDCILDIYGDVLELRGKRDFIPF-RFQGQYEDQKTGLYYNRFR 85 Query: 287 YYDPLQGRYITQDPIGLKGGW-NFYQYPLNPVQYIDSMGL 325 YY P G YI+ DPIGL G Y Y + Y+D GL Sbjct: 86 YYSPQMGMYISSDPIGLAGNNPTLYGYVEDVNSYLDLFGL 125 >UniRef50_Q4UTI1 RhsD protein n=4 Tax=Xanthomonas RepID=Q4UTI1_XANC8 Length = 1465 Score = 65.5 bits (158), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 43/118 (36%), Positives = 58/118 (49%), Gaps = 8/118 (6%) Query: 218 ARKIHLYHCDHRGLPLALVS---TEGATEWCAEYDEWGNLLNEENP----HQLQQLIRLP 270 A K+H DH G P +V A W + + +GN ++P L +R P Sbjct: 1322 ANKLHYIEPDHLGSPRVVVDPVRNVAAWSWSLKGEAFGNTAPNQDPDGDGAALVLDMRFP 1381 Query: 271 GQQYDEESGLYYNRHRYYDPLQGRYITQDPIGLKGGWNFYQY-PLNPVQYIDSMGLAS 327 GQ++D SGL N R YD GRY DPIGL GG + + Y +P+ ID +GL S Sbjct: 1382 GQRFDAASGLNQNYFRDYDSATGRYGQSDPIGLGGGLSTFGYVGGSPLYLIDPLGLES 1439 >UniRef50_C0FSB4 Putative uncharacterized protein n=1 Tax=Roseburia inulinivorans DSM 16841 RepID=C0FSB4_9FIRM Length = 223 Score = 65.5 bits (158), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 43/103 (41%), Positives = 53/103 (51%), Gaps = 7/103 (6%) Query: 239 EGATEWCAEYDEWGNLLNEENPHQLQQL-IRLPGQQYDEESGLYYNRHRYYDPLQGRYIT 297 EG W D +G + EE + + R GQ DEE+GLYYNR RYY P +G Y Sbjct: 7 EGKKVWERNLDIYGRVKTEEALGEKNLIPFRFQGQYEDEETGLYYNRFRYYSPEEGCYTQ 66 Query: 298 QDPIGLKGGW-NFYQYPLNPVQYIDSMGLA-----SKYGHLNN 334 QDPIGL GG Y Y + + +D GLA YG LN+ Sbjct: 67 QDPIGLAGGNPTLYGYVYDTLCELDPFGLAILFETGTYGGLNS 109 >UniRef50_UPI0001AF39C0 YD repeat-containing protein n=1 Tax=Pseudomonas syringae pv. oryzae str. 1_6 RepID=UPI0001AF39C0 Length = 179 Score = 65.5 bits (158), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 30/51 (58%), Positives = 37/51 (72%) Query: 274 YDEESGLYYNRHRYYDPLQGRYITQDPIGLKGGWNFYQYPLNPVQYIDSMG 324 +D E+GL+YN RYYDP GR+ TQDPIGL GG+N YQY N +ID +G Sbjct: 1 FDVETGLHYNTFRYYDPEIGRFTTQDPIGLLGGFNLYQYAPNTNGWIDPLG 51 >UniRef50_B3E8D4 YD repeat protein n=1 Tax=Geobacter lovleyi SZ RepID=B3E8D4_GEOLS Length = 1464 Score = 65.1 bits (157), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 39/114 (34%), Positives = 59/114 (51%), Gaps = 9/114 (7%) Query: 229 RGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEESGLYYNRHRYY 288 RG A++++ G+ YD +G L L Q IR + YDE +GLYY HR+Y Sbjct: 1187 RGDVTAVLNSSGSVVASYAYDPFGGTLAASG--TLSQPIRYSTKLYDEGTGLYYFGHRFY 1244 Query: 289 DPLQGRYITQDPIGLKGGWNFYQYPL-NPVQYIDSMGLASKYGHLNNGGYGARP 341 P GR++++DP+ N Y++ NP+ + D G A +NGG+ RP Sbjct: 1245 SPQMGRWLSRDPLSEMASINLYRFAANNPLTHFDPFGAA------DNGGFWDRP 1292 >UniRef50_Q7MZK7 Similar to the N-terminal region of RhsC protein n=2 Tax=Enterobacteriaceae RepID=Q7MZK7_PHOLL Length = 174 Score = 64.7 bits (156), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 41/88 (46%), Positives = 48/88 (54%), Gaps = 3/88 (3%) Query: 279 GLYYNRHRYYDPLQGRYITQDPIGLKGGWNFYQYPLNPVQYIDSMGLASK---YGHLNNG 335 GL++N +RYY P GR+IT DPIGLKGG N YQY NPV +ID +G A H+ Sbjct: 2 GLHFNTYRYYAPEIGRFITPDPIGLKGGLNLYQYAPNPVTWIDPLGWAGNPKTATHITYQ 61 Query: 336 GYGARPNKPPTPDPSKLPDIAKQLRLPY 363 G A KP SK A Q L Y Sbjct: 62 GIDAETGKPYVGYASKQGRQAAQEILKY 89 >UniRef50_B8JCD4 YD repeat protein n=2 Tax=Anaeromyxobacter dehalogenans 2CP-1 RepID=B8JCD4_ANAD2 Length = 665 Score = 64.7 bits (156), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 49/133 (36%), Positives = 65/133 (48%), Gaps = 23/133 (17%) Query: 215 YTPARKI---HLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENP-----HQLQQL 266 YTP++ + +H DH G+P AL S EG T W A +G + P + Sbjct: 409 YTPSQAAPRPYYFHLDHIGMPRALSSPEGVTVWSAATKPYGEVSETMTPDPATGRTVVTN 468 Query: 267 IRLPGQQYDEE-------SGLYYNRHRYYDPLQGRYITQDPIGLKGGWN------FYQYP 313 +RLPG QYDE G YYN +R+Y P GRY+ DPI +G +N +Y Y Sbjct: 469 LRLPG-QYDERLLGSLGLQGPYYNWNRWYLPGVGRYLELDPIASRGFFNSGYGVDWYGYA 527 Query: 314 -LNPVQYIDSMGL 325 N V+Y D GL Sbjct: 528 GQNAVRYTDRRGL 540 >UniRef50_B7X4I1 Putative uncharacterized protein n=1 Tax=Comamonas testosteroni KF-1 RepID=B7X4I1_COMTE Length = 221 Score = 64.7 bits (156), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 34/62 (54%), Positives = 41/62 (66%), Gaps = 1/62 (1%) Query: 267 IRLPGQQYDEESGLYYNRHRYYDPLQGRYITQDPIGLKGGWNFYQYP-LNPVQYIDSMGL 325 +R PGQ D+E+GL+YN R YDP GRY+ DPIGL G N Y Y NP+ +D MGL Sbjct: 31 LRFPGQIRDDETGLHYNYFRDYDPETGRYVQSDPIGLLEGINTYAYVRGNPLSNVDPMGL 90 Query: 326 AS 327 AS Sbjct: 91 AS 92 >UniRef50_B4VFT3 Rhs protein n=4 Tax=Bacteria RepID=B4VFT3_9ACTO Length = 1253 Score = 64.7 bits (156), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 77/268 (28%), Positives = 103/268 (38%), Gaps = 60/268 (22%) Query: 69 RYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDG-DRLTTIQN-DRTRIQTIY 126 RY +D LGR ++ R LSRKP Y W+ DRL + D TR + Y Sbjct: 906 RYEHDALGRVTLRQKTR----------LSRKPDTWRYEWNAEDRLVGVTTPDGTRWRYRY 955 Query: 127 QPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILA 186 P RR+ L +SG VL + L + L Sbjct: 956 DP------------------LGRRTAKQRLSESG----------SVLEETLFAWDGTTLC 987 Query: 187 DRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHR---------GLPLALVS 237 EES + +TV + P+ T +I D R G P L++ Sbjct: 988 ----EES-----AGRVTVTWTHQGLHPL-TQTERIGQGDVDDRFFAIVTDLVGTPTHLLA 1037 Query: 238 TEGATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEESGLYYNRHRYYDPLQGRYIT 297 +G T W WG + L R PGQ YD ESGL++N R YDP Y++ Sbjct: 1038 EDGTTAWHTRATLWGTTTWNSDATAYTPL-RFPGQYYDPESGLHHNYFRTYDPETAHYLS 1096 Query: 298 QDPIGLKGGWNFYQYPLNPVQYIDSMGL 325 DP+GL N Y NP + D +GL Sbjct: 1097 PDPLGLAPAPNPTTYVHNPHTWSDPLGL 1124 >UniRef50_UPI0001B52689 Rhs core protein with extension n=1 Tax=Shigella sp. D9 RepID=UPI0001B52689 Length = 186 Score = 64.3 bits (155), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 31/56 (55%), Positives = 37/56 (66%) Query: 271 GQQYDEESGLYYNRHRYYDPLQGRYITQDPIGLKGGWNFYQYPLNPVQYIDSMGLA 326 GQ D ESGL YNR RYY+P G Y+ DP+GL GG Y+Y NP Y+D +GLA Sbjct: 1 GQWQDAESGLCYNRFRYYEPESGMYLVSDPLGLLGGEQTYRYVPNPCGYVDPLGLA 56 >UniRef50_Q2Y6W6 RhsD protein n=1 Tax=Nitrosospira multiformis ATCC 25196 RepID=Q2Y6W6_NITMU Length = 207 Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 38/81 (46%), Positives = 45/81 (55%), Gaps = 4/81 (4%) Query: 248 YDEWGNLLNEENPHQLQQL---IRLPGQQYDEESGLYYNRHRYYDPLQGRYITQDPIGLK 304 Y +G +NP L +R PGQ +D E+GL+YN R YDP GRYI DPIGL Sbjct: 5 YGPFGANPPNQNPSGLGTFSYNLRYPGQYHDAETGLHYNYFRDYDPKTGRYIQSDPIGLA 64 Query: 305 GGWNFYQY-PLNPVQYIDSMG 324 GG N Y Y NP+ ID G Sbjct: 65 GGINTYVYVEGNPLSKIDPTG 85 >UniRef50_B1HKQ3 Rhs family protein n=1 Tax=Burkholderia pseudomallei S13 RepID=B1HKQ3_BURPS Length = 1749 Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 41/121 (33%), Positives = 58/121 (47%), Gaps = 3/121 (2%) Query: 224 YHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEESGLYYN 283 + D G +AL + GA YD +GN ++ + G++ D +GLYYN Sbjct: 1513 FLTDSLGSTIALTDSAGAIRQRYSYDPYGNTEQSDSTTGFTNPYQYTGREMDA-AGLYYN 1571 Query: 284 RHRYYDPLQGRYITQDPIGLKGG-WNFYQYP-LNPVQYIDSMGLASKYGHLNNGGYGARP 341 R RYY PL +I++DPI GG +FY Y +PV + D +GL S N G Sbjct: 1572 RARYYSPLMSGFISEDPITFGGGQLSFYGYSDSDPVNHTDRLGLFSLTRTFANAAGGVFC 1631 Query: 342 N 342 N Sbjct: 1632 N 1632 >UniRef50_D2KTW4 Putative uncharacterized protein n=2 Tax=Streptomyces RepID=D2KTW4_9ACTO Length = 1097 Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 39/109 (35%), Positives = 52/109 (47%), Gaps = 3/109 (2%) Query: 218 ARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQL-IRLPGQQYDE 276 + + H D G P L++ +G W WG L P +R PGQ D Sbjct: 896 STRFHTIVTDPIGTPTELITPDGHLAWQHRTTLWGTPL--PTPSDTTTCPLRFPGQYADP 953 Query: 277 ESGLYYNRHRYYDPLQGRYITQDPIGLKGGWNFYQYPLNPVQYIDSMGL 325 E+GL YN HRYYDP +Y+T DP+GL + Y NP + D +GL Sbjct: 954 ETGLNYNHHRYYDPETAQYLTPDPLGLAPAPHPRAYVHNPHTWQDPLGL 1002 >UniRef50_D0KFB3 Putative uncharacterized protein n=1 Tax=Pectobacterium wasabiae WPP163 RepID=D0KFB3_PECWW Length = 283 Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 38/98 (38%), Positives = 47/98 (47%) Query: 230 GLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEESGLYYNRHRYYD 289 G P AL +G W A + GQ D ESGL YNR RYYD Sbjct: 45 GEPQALYKPDGTLRWQAPKSTLWGQRRSAYADNADPGLGFAGQYRDTESGLCYNRFRYYD 104 Query: 290 PLQGRYITQDPIGLKGGWNFYQYPLNPVQYIDSMGLAS 327 G Y++ DPIG+ GG N Y Y NP+ ++D +GLA Sbjct: 105 SNGGCYVSPDPIGVAGGDNNYGYVQNPLDWVDPLGLAG 142 >UniRef50_D1WVZ1 YD repeat protein n=1 Tax=Streptomyces sp. ACT-1 RepID=D1WVZ1_9ACTO Length = 2294 Score = 63.5 bits (153), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 40/108 (37%), Positives = 54/108 (50%), Gaps = 12/108 (11%) Query: 222 HLYHCDHRGLPLALVSTEGATEWCAEYDEWG----NLLNEENPHQLQQLIRLPGQQYDEE 277 +Y D G + + +T+G YD G + NP+ G++ D Sbjct: 1887 QIYLTDALGSIVGMANTDGTIATRYTYDPNGQPTTSGAASSNPYTFT------GRESDG- 1939 Query: 278 SGLYYNRHRYYDPLQGRYITQDPIGLKGGWNFYQYPL-NPVQYIDSMG 324 +GL Y R+RYYDP GR+I+QDPIG GG N YQY L +P Y D G Sbjct: 1940 TGLLYYRNRYYDPESGRFISQDPIGHAGGTNLYQYALSSPTTYTDPSG 1987 >UniRef50_Q7UK50 Probable wall-associated protein n=1 Tax=Rhodopirellula baltica RepID=Q7UK50_RHOBA Length = 381 Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 47/147 (31%), Positives = 69/147 (46%), Gaps = 11/147 (7%) Query: 226 CDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEESGLYYNRH 285 D G +V ++G E YD +GN+++E + + L G++ DE SGL Y+R Sbjct: 116 SDQLGSVRDVVDSDGTVENHLVYDAYGNVVSETD-TDIDFLYGFTGRERDEASGLNYHRA 174 Query: 286 RYYDPLQGRYITQDPIGLKGG-WNFYQYPLN-PVQYIDSMGLASKYGHLNNGGYGARPNK 343 RY+D GR+++QDPI K G + Y+Y N ++ D GL GG G P + Sbjct: 175 RYFDTNNGRWMSQDPIRFKAGDYKLYRYVGNEATRFNDPSGLIQASDDEMIGGQGPTPQE 234 Query: 344 PP--------TPDPSKLPDIAKQLRLP 362 PDP D + RLP Sbjct: 235 QSISVLEEVVVPDPKFFWDPGFKWRLP 261 >UniRef50_Q2SM81 Rhs family protein n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SM81_HAHCH Length = 239 Score = 62.8 bits (151), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 39/124 (31%), Positives = 57/124 (45%), Gaps = 7/124 (5%) Query: 221 IHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEESGL 280 ++ H DH G P + E W +G + E + Q +R PGQ D+ESGL Sbjct: 32 LYFIHSDHLGTPQVMTDNEQNVVWKTLQTPFGERVEETG--SIIQPLRFPGQYADQESGL 89 Query: 281 YYNRHRYYDPLQGRYITQDPIGLKGGWNFYQYPLN-----PVQYIDSMGLASKYGHLNNG 335 YN R YDP GRY+ DP G+ +N Q + + Y+DS + Y ++ N Sbjct: 90 RYNYFRDYDPSLGRYVQSDPRGILFDFNDPQRIVAGMTGISIPYVDSTQINDSYTYVKNS 149 Query: 336 GYGA 339 G+ Sbjct: 150 PIGS 153 >UniRef50_UPI0001B52686 Rhs core protein with extension n=1 Tax=Shigella sp. D9 RepID=UPI0001B52686 Length = 205 Score = 62.8 bits (151), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 30/57 (52%), Positives = 38/57 (66%) Query: 271 GQQYDEESGLYYNRHRYYDPLQGRYITQDPIGLKGGWNFYQYPLNPVQYIDSMGLAS 327 GQ D ESGL YNR RYY+P G Y+ DP+GL GG Y+Y NP ++D +GLA+ Sbjct: 1 GQWQDAESGLCYNRFRYYEPETGMYLVSDPLGLLGGEQTYRYVPNPCGWVDPLGLAA 57 >UniRef50_A6EH31 Rhs family protein n=2 Tax=cellular organisms RepID=A6EH31_9SPHI Length = 1409 Score = 62.8 bits (151), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 37/103 (35%), Positives = 52/103 (50%), Gaps = 1/103 (0%) Query: 226 CDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEESGLYYNRH 285 D G P+ S +G W E D +G + + + GQ D E+GL YNR Sbjct: 1173 ADQLGTPVQGYSDDGELIWQRELDSYGRMKMQRGDAGFCNYL-YQGQLMDPETGLAYNRF 1231 Query: 286 RYYDPLQGRYITQDPIGLKGGWNFYQYPLNPVQYIDSMGLASK 328 RYY+P +G Y++QDPI L GG Y Y + ++D GLA + Sbjct: 1232 RYYNPEEGIYVSQDPIRLLGGSRLYGYVKDTNIWLDPFGLACE 1274 >UniRef50_B5S3N8 Rhs-related protein n=1 Tax=Ralstonia solanacearum RepID=B5S3N8_RALSO Length = 1714 Score = 62.4 bits (150), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 37/118 (31%), Positives = 56/118 (47%), Gaps = 1/118 (0%) Query: 223 LYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEESGLYY 282 +Y +H G ++ +G EY +G L+ + + + G QY SG+Y Sbjct: 1488 IYARNHLGSVTDTLTPDGRAVTHTEYGPYGELVKSQGRAEYRSDFGYAGMQYHAASGMYL 1547 Query: 283 NRHRYYDPLQGRYITQDPIGLKGGWNFYQY-PLNPVQYIDSMGLASKYGHLNNGGYGA 339 R YDP GR++++DPIG +GG+N Y Y NP+ Y D G G L G+ Sbjct: 1548 TLFRAYDPGTGRWVSRDPIGERGGFNLYGYVNGNPIGYRDPRGTNPLTGALTGAEIGS 1605 >UniRef50_Q07833 Wall-associated protein n=18 Tax=Bacillaceae RepID=WAPA_BACSU Length = 2334 Score = 62.4 bits (150), Expect = 4e-08, Method: Composition-based stats. Identities = 42/116 (36%), Positives = 57/116 (49%), Gaps = 6/116 (5%) Query: 215 YTPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQ-QLIRLPGQQ 273 YT K + YH + G +A+ + G T +YD WGN E +++ R G Q Sbjct: 2071 YTENGKKYFYHYNAHGDIIAISDSTGKTVAKYQYDAWGNPTKTEASDEVKDNRYRYAGYQ 2130 Query: 274 YDEESGLYYNRHRYYDPLQGRYITQDPIGLKGG----WNFYQY-PLNPVQYIDSMG 324 YDEE+GLYY RYY+P G +++ DP G N Y Y NPV +D G Sbjct: 2131 YDEETGLYYLMARYYEPRNGVFLSLDPDPGSDGDSLDQNGYAYGNNNPVMNVDPDG 2186 >UniRef50_C5ALD9 Rhs family protein n=1 Tax=Burkholderia glumae BGR1 RepID=C5ALD9_BURGB Length = 1136 Score = 62.0 bits (149), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 39/123 (31%), Positives = 62/123 (50%), Gaps = 3/123 (2%) Query: 204 VEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLL--NEENPH 261 ++Q ++ + A +++ YH D G LAL + A W AE WG L Sbjct: 969 LDQTLDENGEIDAAATQLYHYHTDGIGTALALSDSGSAMVWRAESRAWGEPLPPLALGHE 1028 Query: 262 QLQQLIRLPGQQYDEESGLYYNRHRYYDPLQGRYITQDPIGLKGGWNFYQYPLNPVQYID 321 ++Q +R GQ DEE+ L++N R YDP GRY++ D G + Y+Y NP+ + + Sbjct: 1029 AVEQPLRFAGQYADEETSLHHNGRRIYDPGSGRYLSPDRTA-PDGLSPYRYAPNPLTWCN 1087 Query: 322 SMG 324 +G Sbjct: 1088 PLG 1090 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_P77779 Putative uncharacterized protein ybfO n=67 Tax=E... 705 0.0 UniRef50_Q328Z1 RhsA protein in rhs element n=7 Tax=Enterobacter... 451 e-125 UniRef50_Q31U53 Putative uncharacterized protein n=1 Tax=Shigell... 445 e-123 UniRef50_P16919 Protein rhsD n=261 Tax=Bacteria RepID=RHSD_ECOLI 422 e-116 UniRef50_UPI0001B52C8C protein, rhs-like protein n=4 Tax=Enterob... 401 e-110 UniRef50_C1M8X5 Core protein n=2 Tax=Citrobacter RepID=C1M8X5_9ENTR 389 e-107 UniRef50_UPI0001C341D4 protein RhsA n=1 Tax=Citrobacter youngae ... 388 e-106 UniRef50_B5PJT7 Protein RhsD n=2 Tax=Enterobacteriaceae RepID=B5... 319 2e-85 UniRef50_O52663 Core protein (Fragment) n=5 Tax=Enterobacteriace... 272 3e-71 UniRef50_A1TV35 YD repeat protein n=2 Tax=Acidovorax RepID=A1TV3... 260 6e-68 UniRef50_A1TJG7 YD repeat protein n=4 Tax=Proteobacteria RepID=A... 259 2e-67 UniRef50_Q7NY44 Probable Rhs-family protein n=2 Tax=Chromobacter... 257 1e-66 UniRef50_Q1LDW7 YD repeat n=2 Tax=Burkholderiaceae RepID=Q1LDW7_... 253 8e-66 UniRef50_A9C0N8 YD repeat protein n=5 Tax=cellular organisms Rep... 253 1e-65 UniRef50_Q39K64 Rhs family protein n=22 Tax=Burkholderia RepID=Q... 253 1e-65 UniRef50_Q0JZD5 RHS family protein n=9 Tax=Bacteria RepID=Q0JZD5... 252 2e-65 UniRef50_A1TR18 YD repeat protein n=8 Tax=Acidovorax RepID=A1TR1... 252 2e-65 UniRef50_D1T3N5 YD repeat protein n=1 Tax=Acidovorax avenae subs... 250 7e-65 UniRef50_D1T3Q3 YD repeat protein (Fragment) n=2 Tax=Acidovorax ... 250 7e-65 UniRef50_C5CZG8 RHS protein n=1 Tax=Variovorax paradoxus S110 Re... 250 9e-65 UniRef50_D1T3N4 YD repeat protein n=2 Tax=Betaproteobacteria Rep... 250 1e-64 UniRef50_UPI00016A9A82 Rhs family protein n=2 Tax=Burkholderia o... 242 2e-62 UniRef50_B2HXH5 Rhs family protein n=5 Tax=Acinetobacter baumann... 241 6e-62 UniRef50_A9AE26 Rhs family protein n=10 Tax=cellular organisms R... 232 2e-59 UniRef50_P32109 Putative uncharacterized protein yibJ n=14 Tax=B... 232 2e-59 UniRef50_A8A655 Rhs family protein n=14 Tax=Enterobacteriaceae R... 231 3e-59 UniRef50_C3JXH8 Putative Rhs protein n=1 Tax=Pseudomonas fluores... 229 2e-58 UniRef50_Q147B5 Rhs family protein n=2 Tax=Betaproteobacteria Re... 228 3e-58 UniRef50_Q6D1M4 Rhs protein n=5 Tax=Enterobacteriaceae RepID=Q6D... 227 6e-58 UniRef50_D1VCV7 YD repeat protein n=1 Tax=Frankia sp. EuI1c RepI... 226 1e-57 UniRef50_Q4ZLF3 YD repeat n=5 Tax=Pseudomonas syringae group Rep... 225 3e-57 UniRef50_Q2SPP2 Rhs family protein n=3 Tax=Hahella chejuensis KC... 225 3e-57 UniRef50_C5AA19 Rhs family protein n=1 Tax=Burkholderia glumae B... 224 6e-57 UniRef50_A1U3R9 YD repeat protein n=3 Tax=Gammaproteobacteria Re... 224 7e-57 UniRef50_B1J8X0 YD repeat protein n=50 Tax=Gammaproteobacteria R... 222 2e-56 UniRef50_Q2SKM2 Rhs family protein n=3 Tax=Hahella chejuensis KC... 220 8e-56 UniRef50_Q87U70 Rhs family protein n=2 Tax=Pseudomonas RepID=Q87... 220 1e-55 UniRef50_Q1I7Q5 Putative uncharacterized protein n=11 Tax=Pseudo... 218 4e-55 UniRef50_D0KEV6 RHS protein n=2 Tax=Enterobacteriaceae RepID=D0K... 215 2e-54 UniRef50_Q7MDR0 Rhs family protein n=3 Tax=Vibrio vulnificus Rep... 215 3e-54 UniRef50_C5CXA7 YD repeat protein n=1 Tax=Variovorax paradoxus S... 215 3e-54 UniRef50_C7MXD3 Rhs family protein n=1 Tax=Saccharomonospora vir... 215 4e-54 UniRef50_Q12LF3 YD repeat n=2 Tax=Shewanella denitrificans OS217... 211 3e-53 UniRef50_B2K1J9 YD repeat protein n=23 Tax=Yersinia RepID=B2K1J9... 210 7e-53 UniRef50_B7GX39 Protein rhsD n=4 Tax=Acinetobacter baumannii Rep... 210 9e-53 UniRef50_A1TSU8 YD repeat protein n=4 Tax=Acidovorax RepID=A1TSU... 210 1e-52 UniRef50_Q13ML3 YD repeat protein n=10 Tax=Proteobacteria RepID=... 209 2e-52 UniRef50_D0KES6 YD repeat protein n=15 Tax=Gammaproteobacteria R... 208 4e-52 UniRef50_B2VH58 Rhs family protein n=5 Tax=Enterobacteriaceae Re... 207 6e-52 UniRef50_Q4K3M9 Rhs family protein n=5 Tax=Pseudomonas RepID=Q4K... 207 7e-52 UniRef50_B5JS46 NHL repeat containing protein n=2 Tax=gamma prot... 207 7e-52 UniRef50_C9Y459 Putative uncharacterized protein n=1 Tax=Cronoba... 207 7e-52 UniRef50_A7FN18 RHS/YD repeat protein n=5 Tax=cellular organisms... 206 1e-51 UniRef50_A7FDJ9 RHS/YD repeat protein n=30 Tax=Enterobacteriacea... 206 2e-51 UniRef50_C6M5B1 Rhs-related protein n=7 Tax=Proteobacteria RepID... 205 4e-51 UniRef50_A5GE16 YD repeat protein n=1 Tax=Geobacter uraniireduce... 205 4e-51 UniRef50_A6GLW0 Rhs family protein n=1 Tax=Limnobacter sp. MED10... 204 7e-51 UniRef50_B3PHE6 RHS Repeat family n=5 Tax=cellular organisms Rep... 203 9e-51 UniRef50_UPI0001B52595 rhsE element core protein RshE n=1 Tax=Es... 203 1e-50 UniRef50_C8QGI4 YD repeat protein n=1 Tax=Pantoea sp. At-9b RepI... 202 3e-50 UniRef50_C9Y441 Putative uncharacterized protein n=1 Tax=Cronoba... 201 6e-50 UniRef50_C0Q6Q9 Rhs-family protein n=27 Tax=Enterobacteriaceae R... 201 6e-50 UniRef50_C6CNW6 YD repeat protein n=8 Tax=Enterobacteriaceae Rep... 200 7e-50 UniRef50_UPI0001BC4026 Rhs family protein n=6 Tax=Neisseria RepI... 200 8e-50 UniRef50_A7FDK7 YD/RHS repeat protein n=25 Tax=Enterobacteriacea... 200 1e-49 UniRef50_A4SKJ3 Rhs family protein n=2 Tax=Bacteria RepID=A4SKJ3... 200 1e-49 UniRef50_C6AKX3 Rhs family protein n=4 Tax=Aggregatibacter aphro... 199 2e-49 UniRef50_Q6LUC4 Putative uncharacterized protein n=1 Tax=Photoba... 199 2e-49 UniRef50_B7LTT0 Putative uncharacterized protein n=4 Tax=Enterob... 199 2e-49 UniRef50_Q6LUC6 Hypothetical nucleotidyltransferase n=1 Tax=Phot... 198 5e-49 UniRef50_C1M4X0 Predicted protein n=1 Tax=Citrobacter sp. 30_2 R... 197 6e-49 UniRef50_A6V8C8 Putative uncharacterized protein n=7 Tax=Pseudom... 196 1e-48 UniRef50_B3PEN8 Rhsfamily protein n=2 Tax=Cellvibrio japonicus U... 196 2e-48 UniRef50_C9NF93 YD repeat protein n=1 Tax=Streptomyces flavogris... 195 4e-48 UniRef50_B5H9Z7 Rhs protein n=2 Tax=Streptomyces RepID=B5H9Z7_STRPR 195 4e-48 UniRef50_B1KGR6 YD repeat protein n=1 Tax=Shewanella woodyi ATCC... 194 5e-48 UniRef50_Q3JSF4 RhsD protein n=23 Tax=Burkholderia pseudomallei ... 194 7e-48 UniRef50_C5ALM7 YD repeat protein n=19 Tax=Proteobacteria RepID=... 193 1e-47 UniRef50_C6M9F4 Rhs family protein n=8 Tax=Neisseria RepID=C6M9F... 193 1e-47 UniRef50_A8ZSG6 YD repeat protein n=1 Tax=Desulfococcus oleovora... 192 2e-47 UniRef50_C5AIF2 Rhs family protein n=1 Tax=Burkholderia glumae B... 192 2e-47 UniRef50_A7K3Q8 Rhs family protein n=7 Tax=Vibrio RepID=A7K3Q8_V... 192 3e-47 UniRef50_D0HCV2 Rhs protein n=3 Tax=Vibrio mimicus VM223 RepID=D... 192 3e-47 UniRef50_C8Q7Z5 YD repeat protein n=8 Tax=Enterobacteriaceae Rep... 192 3e-47 UniRef50_D0BWK2 YD repeat protein n=1 Tax=Acinetobacter sp. RUH2... 192 3e-47 UniRef50_Q2SGE8 Rhs family protein n=1 Tax=Hahella chejuensis KC... 191 4e-47 UniRef50_B4ETQ2 Rhs-family protein n=9 Tax=Enterobacteriaceae Re... 191 5e-47 UniRef50_A3KUM5 Rhs family protein n=10 Tax=Pseudomonas aerugino... 190 7e-47 UniRef50_C7HJS3 YD repeat protein (Fragment) n=3 Tax=Clostridium... 189 2e-46 UniRef50_C0EPY1 Putative uncharacterized protein n=7 Tax=Neisser... 188 3e-46 UniRef50_Q2SFR5 Rhs family protein n=1 Tax=Hahella chejuensis KC... 188 3e-46 UniRef50_UPI0001B53B37 YD repeat protein n=1 Tax=Streptomyces sp... 188 4e-46 UniRef50_Q2SIG5 Rhs family protein n=1 Tax=Hahella chejuensis KC... 187 7e-46 UniRef50_A1AK54 YD repeat protein n=1 Tax=Pelobacter propionicus... 187 8e-46 UniRef50_B8FBZ2 YD repeat protein n=1 Tax=Desulfatibacillum alke... 186 1e-45 UniRef50_A1TTP6 YD repeat protein n=2 Tax=Acidovorax citrulli AA... 186 2e-45 UniRef50_Q399U9 Rhs family protein n=3 Tax=Proteobacteria RepID=... 186 2e-45 UniRef50_A4FJ21 YD repeat protein n=1 Tax=Saccharopolyspora eryt... 186 2e-45 UniRef50_B4EGW8 RHS-family protein n=9 Tax=Burkholderiaceae RepI... 186 2e-45 UniRef50_B2TKH9 YD repeat protein n=1 Tax=Clostridium botulinum ... 186 2e-45 UniRef50_UPI0001AF2680 RHS/YD repeat-containing protein n=1 Tax=... 185 4e-45 UniRef50_C7Q0B8 YD repeat protein n=1 Tax=Catenulispora acidiphi... 185 5e-45 UniRef50_C7PJF4 YD repeat protein n=2 Tax=Chitinophaga pinensis ... 184 7e-45 UniRef50_Q7N2G0 Complete genome; segment 11/17 n=4 Tax=Gammaprot... 184 7e-45 UniRef50_B4V6T6 Rhs protein n=2 Tax=Streptomyces RepID=B4V6T6_9ACTO 184 7e-45 UniRef50_Q30CR7 LipX3 n=4 Tax=Streptomyces RepID=Q30CR7_STRAU 184 9e-45 UniRef50_Q9L0E3 Putative Rhs protein n=2 Tax=Streptomyces RepID=... 183 1e-44 UniRef50_D0KZB0 YD repeat protein n=1 Tax=Halothiobacillus neapo... 183 1e-44 UniRef50_B0VRR7 Putative uncharacterized protein n=1 Tax=Acineto... 183 2e-44 UniRef50_Q48LL6 Rhs family protein n=1 Tax=Pseudomonas syringae ... 183 2e-44 UniRef50_UPI0001B4DD67 Rhs protein n=1 Tax=Streptomyces hygrosco... 183 2e-44 UniRef50_C6M9F5 RHS family protein n=2 Tax=Bacteria RepID=C6M9F5... 181 4e-44 UniRef50_UPI0001B56FBA YD repeat-containing protein n=1 Tax=Stre... 181 5e-44 UniRef50_Q2T5B9 YD repeat protein n=39 Tax=Proteobacteria RepID=... 181 6e-44 UniRef50_C1B7W9 Putative uncharacterized protein n=1 Tax=Rhodoco... 180 7e-44 UniRef50_D1JME6 Rhs family protein n=22 Tax=Bacteroides RepID=D1... 180 8e-44 UniRef50_B9B9U8 YD repeat protein n=1 Tax=Burkholderia multivora... 180 9e-44 UniRef50_B4SV70 Rhs-family protein n=42 Tax=Enterobacteriaceae R... 179 1e-43 UniRef50_B1HM94 Cell wall-associated protein n=5 Tax=Lysinibacil... 179 1e-43 UniRef50_UPI00019F17FA RhsC core protein with extension n=1 Tax=... 179 1e-43 UniRef50_C6CI62 YD repeat protein n=7 Tax=Enterobacteriaceae Rep... 179 1e-43 UniRef50_A0LJM9 YD repeat protein n=3 Tax=Syntrophobacter fumaro... 179 2e-43 UniRef50_C6WJA6 YD repeat protein n=3 Tax=Actinosynnema mirum DS... 179 3e-43 UniRef50_B4V251 LipX3 n=2 Tax=Streptomyces RepID=B4V251_9ACTO 178 3e-43 UniRef50_D1AA66 YD repeat-containing protein n=1 Tax=Thermomonos... 178 4e-43 UniRef50_A1TQS0 YD repeat protein n=2 Tax=Acidovorax RepID=A1TQS... 178 5e-43 UniRef50_B2HAQ4 RhsD protein n=4 Tax=Burkholderia RepID=B2HAQ4_B... 178 5e-43 UniRef50_D1S833 YD repeat protein n=1 Tax=Micromonospora auranti... 178 6e-43 UniRef50_B9M2L6 YD repeat protein n=6 Tax=Geobacter sp. FRC-32 R... 177 8e-43 UniRef50_A3NNM1 Protein RhsD n=20 Tax=pseudomallei group RepID=A... 177 1e-42 UniRef50_A6M1K5 YD repeat protein n=4 Tax=Clostridium RepID=A6M1... 176 1e-42 UniRef50_A9C2K3 YD repeat protein n=1 Tax=Delftia acidovorans SP... 176 1e-42 UniRef50_C7QG23 YD repeat protein n=2 Tax=Catenulispora acidiphi... 176 2e-42 UniRef50_B5I7B2 Rhs repeat protein n=1 Tax=Streptomyces sviceus ... 176 2e-42 UniRef50_A9FBU5 Conserved carbohydrate-binding protein, Rhs fami... 176 2e-42 UniRef50_A9AKU8 Type VI secretion system Vgr family protein n=10... 175 2e-42 UniRef50_B4B5R8 YD repeat protein n=1 Tax=Cyanothece sp. PCC 782... 175 2e-42 UniRef50_D2TGW0 Putative Rhs protein n=2 Tax=Citrobacter RepID=D... 175 3e-42 UniRef50_B4ETQ7 Putative Rhs-family protein n=3 Tax=Enterobacter... 175 3e-42 UniRef50_C7Q0A7 YD repeat protein n=2 Tax=Catenulispora acidiphi... 174 4e-42 UniRef50_C7MZM5 Rhs family protein n=1 Tax=Saccharomonospora vir... 173 1e-41 UniRef50_C7QAC6 YD repeat protein n=2 Tax=Bacteria RepID=C7QAC6_... 173 1e-41 UniRef50_A9GIJ6 Conserved carbohydrate-binding protein, Rhs fami... 173 1e-41 UniRef50_C9RZN2 YD repeat protein n=2 Tax=Geobacillus RepID=C9RZ... 173 2e-41 UniRef50_B7GLY4 Rhs family protein n=3 Tax=Anoxybacillus flavith... 172 2e-41 UniRef50_A7BPL6 Protein containing RHS repeats n=2 Tax=Beggiatoa... 172 2e-41 UniRef50_Q8GDM7 Rhs n=3 Tax=Photorhabdus RepID=Q8GDM7_PHOLU 172 2e-41 UniRef50_B4UIF2 YD repeat protein n=1 Tax=Anaeromyxobacter sp. K... 171 4e-41 UniRef50_C5SIF6 YD repeat protein n=1 Tax=Asticcacaulis excentri... 171 4e-41 UniRef50_C6CPH2 YD repeat protein n=11 Tax=Enterobacteriaceae Re... 171 6e-41 UniRef50_Q2SFR1 Rhs family protein n=9 Tax=cellular organisms Re... 170 9e-41 UniRef50_A9GD22 Conserved carbohydrate-binding protein, Rhs fami... 170 1e-40 UniRef50_A6EH31 Rhs family protein n=2 Tax=cellular organisms Re... 170 1e-40 UniRef50_Q88FK6 RHS family protein, putative n=1 Tax=Pseudomonas... 170 1e-40 UniRef50_C4NV50 Rhs repeat family protein n=10 Tax=Gammaproteoba... 170 1e-40 UniRef50_B4VFT3 Rhs protein n=4 Tax=Bacteria RepID=B4VFT3_9ACTO 170 1e-40 UniRef50_B2PVY9 Putative uncharacterized protein n=12 Tax=Entero... 169 1e-40 UniRef50_C8QVK4 YD repeat protein n=4 Tax=Desulfurivibrio alkali... 169 1e-40 UniRef50_C8W2A7 YD repeat protein n=3 Tax=Desulfotomaculum aceto... 169 2e-40 UniRef50_C3JCI6 Rhs family protein n=4 Tax=Bacteria RepID=C3JCI6... 169 2e-40 UniRef50_D0KWY8 YD repeat protein n=1 Tax=Halothiobacillus neapo... 169 2e-40 UniRef50_UPI0001B58169 YD repeat-containing protein n=1 Tax=Stre... 167 7e-40 UniRef50_C4SEH6 Insecticidal toxin complex protein n=5 Tax=Yersi... 167 9e-40 UniRef50_A1TTQ1 Rhs family protein n=1 Tax=Acidovorax citrulli A... 165 3e-39 UniRef50_Q07833 Wall-associated protein n=18 Tax=Bacillaceae Rep... 165 4e-39 UniRef50_B1C8M0 Putative uncharacterized protein n=2 Tax=Anaerof... 164 4e-39 UniRef50_Q1K295 YD repeat n=4 Tax=Desulfuromonas acetoxidans DSM... 164 5e-39 UniRef50_D0THP1 YD repeat protein n=1 Tax=Bacteroides sp. 2_1_33... 164 6e-39 UniRef50_D0KES8 RHS protein n=3 Tax=Pectobacterium wasabiae WPP1... 164 6e-39 UniRef50_A9EVR3 Conserved carbohydrate-binding protein, Rhs fami... 164 7e-39 UniRef50_C4KA75 YD repeat protein n=1 Tax=Thauera sp. MZ1T RepID... 163 1e-38 UniRef50_A0LQM7 NHL repeat containing protein n=1 Tax=Syntrophob... 163 1e-38 UniRef50_UPI0001C34A7C Rhs family protein n=1 Tax=Neisseria subf... 163 1e-38 UniRef50_B8FIJ1 YD repeat protein n=1 Tax=Desulfatibacillum alke... 163 1e-38 UniRef50_B3YAC7 YD repeat protein n=3 Tax=Salmonella enterica Re... 163 1e-38 UniRef50_B3X3P2 RhsH n=1 Tax=Shigella dysenteriae 1012 RepID=B3X... 163 1e-38 UniRef50_Q4ZU10 YD repeat n=2 Tax=Pseudomonas syringae group Rep... 163 1e-38 UniRef50_B4SR21 YD repeat protein n=2 Tax=Stenotrophomonas malto... 163 2e-38 UniRef50_A3DF74 YD repeat protein n=17 Tax=Clostridium thermocel... 163 2e-38 UniRef50_A9BX63 YD repeat protein n=2 Tax=cellular organisms Rep... 163 2e-38 UniRef50_B6VUY0 Putative uncharacterized protein n=2 Tax=Bactero... 163 2e-38 UniRef50_C5SID5 YD repeat protein n=1 Tax=Asticcacaulis excentri... 162 3e-38 UniRef50_Q10YX3 YD repeat protein n=1 Tax=Trichodesmium erythrae... 162 3e-38 UniRef50_Q396B9 Rhs family protein n=1 Tax=Burkholderia sp. 383 ... 162 3e-38 UniRef50_A6GBQ3 Putative uncharacterized protein n=1 Tax=Plesioc... 161 4e-38 UniRef50_B3PEK8 RHS Repeat family n=1 Tax=Cellvibrio japonicus U... 161 7e-38 UniRef50_Q2Y592 Peptidase C39, bacteriocin processing n=1 Tax=Ni... 160 1e-37 UniRef50_Q2SFS1 Rhs family protein n=1 Tax=Hahella chejuensis KC... 159 1e-37 UniRef50_D1SWH5 RHS protein (Fragment) n=1 Tax=Acidovorax avenae... 159 1e-37 UniRef50_Q6FD94 Putative RHS-related protein n=1 Tax=Acinetobact... 159 2e-37 UniRef50_A3RZQ8 Core protein n=21 Tax=Ralstonia solanacearum Rep... 159 2e-37 UniRef50_UPI0001BC9640 YD repeat-containing protein n=1 Tax=Pseu... 159 2e-37 UniRef50_A9GT29 Insecticidal toxin complex-like protein n=1 Tax=... 159 2e-37 UniRef50_B4SL73 YD repeat protein n=4 Tax=Stenotrophomonas malto... 159 2e-37 UniRef50_Q466C0 Putative uncharacterized protein n=1 Tax=Methano... 158 4e-37 UniRef50_B1HKQ3 Rhs family protein n=1 Tax=Burkholderia pseudoma... 158 5e-37 UniRef50_C8W2V9 YD repeat protein n=3 Tax=Desulfotomaculum aceto... 158 6e-37 UniRef50_D2UF28 Putative rhs family protein n=2 Tax=Xanthomonas ... 158 7e-37 UniRef50_P77759 Putative uncharacterized protein ylbH n=12 Tax=E... 157 7e-37 UniRef50_Q3BS17 Rhs family protein n=18 Tax=Xanthomonas RepID=Q3... 157 9e-37 UniRef50_A9EZF2 Conserved carbohydrate-binding protein, Rhs fami... 157 1e-36 UniRef50_A4B8X0 YD repeat n=1 Tax=Reinekea blandensis MED297 Rep... 156 1e-36 UniRef50_Q6MNG4 Putative uncharacterized protein n=1 Tax=Bdellov... 156 2e-36 UniRef50_D2KTW4 Putative uncharacterized protein n=2 Tax=Strepto... 156 2e-36 UniRef50_C9Y462 Putative uncharacterized protein n=1 Tax=Cronoba... 156 3e-36 UniRef50_B5S3N8 Rhs-related protein n=1 Tax=Ralstonia solanacear... 155 3e-36 UniRef50_B2PW78 Putative uncharacterized protein n=1 Tax=Provide... 155 3e-36 UniRef50_D1YPP7 RHS repeat-associated core domain protein n=1 Ta... 154 4e-36 UniRef50_Q2PC71 Putative uncharacterized protein Rub7 n=1 Tax=St... 154 5e-36 UniRef50_C0FSB7 Putative uncharacterized protein n=1 Tax=Rosebur... 154 6e-36 UniRef50_UPI000196E06E Rhs family protein n=2 Tax=Neisseria muco... 154 6e-36 UniRef50_C8W2T8 YD repeat protein n=2 Tax=Desulfotomaculum aceto... 154 9e-36 UniRef50_C5ID01 RhsK n=50 Tax=cellular organisms RepID=C5ID01_ECOLX 153 1e-35 UniRef50_B1JCT8 RHS protein n=1 Tax=Pseudomonas putida W619 RepI... 153 1e-35 UniRef50_UPI00019F181C rhsC element core protein RshC n=2 Tax=En... 153 1e-35 UniRef50_C5T0D9 YD repeat protein n=1 Tax=Acidovorax delafieldii... 153 1e-35 UniRef50_A9FQL9 Putative uncharacterized protein n=1 Tax=Sorangi... 153 2e-35 UniRef50_Q4UTI1 RhsD protein n=4 Tax=Xanthomonas RepID=Q4UTI1_XANC8 152 3e-35 UniRef50_C4DNE3 Putative uncharacterized protein n=1 Tax=Stackeb... 151 4e-35 UniRef50_A6Q9U6 Putative uncharacterized protein n=1 Tax=Sulfuro... 151 6e-35 UniRef50_C0EUA4 Putative uncharacterized protein n=1 Tax=Eubacte... 151 7e-35 UniRef50_D2U9B6 Putative rhs family protein n=1 Tax=Xanthomonas ... 151 8e-35 UniRef50_C5B3X8 Putative uncharacterized protein n=1 Tax=Methylo... 150 9e-35 UniRef50_A9EW02 Conserved exported carbohydrate-binding protein,... 150 1e-34 UniRef50_Q2T916 Rhs1 protein n=30 Tax=Burkholderia RepID=Q2T916_... 150 1e-34 UniRef50_B1ZNT0 YD repeat protein n=1 Tax=Opitutus terrae PB90-1... 150 1e-34 UniRef50_C0B4J4 Putative uncharacterized protein n=3 Tax=Coproco... 150 1e-34 UniRef50_Q39VL5 YD repeat protein n=2 Tax=Geobacter metallireduc... 149 2e-34 UniRef50_Q1CXS7 Putative uncharacterized protein n=1 Tax=Myxococ... 149 2e-34 UniRef50_C5SNJ4 YD repeat protein n=1 Tax=Asticcacaulis excentri... 149 3e-34 UniRef50_A9FZA9 Rhs family protein n=1 Tax=Sorangium cellulosum ... 148 3e-34 UniRef50_B0ACW0 Putative uncharacterized protein n=1 Tax=Clostri... 148 5e-34 UniRef50_A6G340 Putative uncharacterized protein n=2 Tax=Plesioc... 148 7e-34 UniRef50_D1PUV1 RHS family protein n=1 Tax=Prevotella bergensis ... 147 7e-34 UniRef50_Q0K1I3 Insecticidal toxin complex protein n=2 Tax=Prote... 147 8e-34 UniRef50_A8YHM6 Genome sequencing data, contig C314 n=1 Tax=Micr... 147 1e-33 UniRef50_A7BNN3 Putative uncharacterized protein n=1 Tax=Beggiat... 147 1e-33 UniRef50_A1TSG3 RHS protein n=1 Tax=Acidovorax citrulli AAC00-1 ... 146 1e-33 UniRef50_A7B690 Putative uncharacterized protein n=3 Tax=Clostri... 146 1e-33 UniRef50_B7H4M5 Uncharacterized protein ybfO n=3 Tax=Acinetobact... 146 2e-33 UniRef50_C5ALD9 Rhs family protein n=1 Tax=Burkholderia glumae B... 146 2e-33 UniRef50_B5MRU6 Rhs-family protein n=9 Tax=Gammaproteobacteria R... 146 2e-33 UniRef50_A6DLJ6 Putative uncharacterized protein n=1 Tax=Lentisp... 146 2e-33 UniRef50_C6IX89 Putative uncharacterized protein n=1 Tax=Paeniba... 146 2e-33 Sequences not found previously or not previously below threshold: UniRef50_A9FBB8 Conserved carbohydrate-binding protein, Rhs fami... 158 5e-37 UniRef50_Q73C66 Wall associated protein, putative n=73 Tax=Bacil... 155 3e-36 UniRef50_B0MES5 Putative uncharacterized protein n=3 Tax=Clostri... 151 5e-35 UniRef50_Q8PMX0 Wall-associated protein n=2 Tax=Xanthomonas RepI... 149 2e-34 UniRef50_Q2SKC0 Rhs family protein n=8 Tax=Hahella chejuensis KC... 148 6e-34 UniRef50_D1W397 RHS repeat-associated core domain protein n=3 Ta... 147 8e-34 >UniRef50_P77779 Putative uncharacterized protein ybfO n=67 Tax=Enterobacteriaceae RepID=YBFO_ECOLI Length = 477 Score = 705 bits (1818), Expect = 0.0, Method: Composition-based stats. Identities = 477/477 (100%), Positives = 477/477 (100%) Query: 1 MWPDNRIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQ 60 MWPDNRIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQ Sbjct: 1 MWPDNRIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQ 60 Query: 61 YAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRT 120 YAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRT Sbjct: 61 YAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRT 120 Query: 121 RIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRL 180 RIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRL Sbjct: 121 RIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRL 180 Query: 181 ESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEG 240 ESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEG Sbjct: 181 ESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEG 240 Query: 241 ATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEESGLYYNRHRYYDPLQGRYITQDP 300 ATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEESGLYYNRHRYYDPLQGRYITQDP Sbjct: 241 ATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEESGLYYNRHRYYDPLQGRYITQDP 300 Query: 301 IGLKGGWNFYQYPLNPVQYIDSMGLASKYGHLNNGGYGARPNKPPTPDPSKLPDIAKQLR 360 IGLKGGWNFYQYPLNPVQYIDSMGLASKYGHLNNGGYGARPNKPPTPDPSKLPDIAKQLR Sbjct: 301 IGLKGGWNFYQYPLNPVQYIDSMGLASKYGHLNNGGYGARPNKPPTPDPSKLPDIAKQLR 360 Query: 361 LPYPIDQASSAPNVFKTFFRALSPYDYTLYCRKWVKPNLTCTPQDDSQYPGMDTKTASDY 420 LPYPIDQASSAPNVFKTFFRALSPYDYTLYCRKWVKPNLTCTPQDDSQYPGMDTKTASDY Sbjct: 361 LPYPIDQASSAPNVFKTFFRALSPYDYTLYCRKWVKPNLTCTPQDDSQYPGMDTKTASDY 420 Query: 421 LPQTNWPTTQLPPGYTCAEPYLFPDINKPDGPATAGIDDLGEILAKMKQRTSRGIRK 477 LPQTNWPTTQLPPGYTCAEPYLFPDINKPDGPATAGIDDLGEILAKMKQRTSRGIRK Sbjct: 421 LPQTNWPTTQLPPGYTCAEPYLFPDINKPDGPATAGIDDLGEILAKMKQRTSRGIRK 477 >UniRef50_Q328Z1 RhsA protein in rhs element n=7 Tax=Enterobacteriaceae RepID=Q328Z1_SHIDS Length = 1213 Score = 451 bits (1161), Expect = e-125, Method: Composition-based stats. Identities = 316/339 (93%), Positives = 322/339 (94%), Gaps = 4/339 (1%) Query: 1 MWPDNRIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQ 60 MWPDNRIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQ Sbjct: 847 MWPDNRIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQ 906 Query: 61 YAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRT 120 YAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKP+VTWYGWDGDRLTTIQNDRT Sbjct: 907 YAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPEVTWYGWDGDRLTTIQNDRT 966 Query: 121 RIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRL 180 RIQTIYQPGSFTPLIRVETATGELAKTQRRSLAD LQQSGGEDGGSVVFPPVLVQMLDRL Sbjct: 967 RIQTIYQPGSFTPLIRVETATGELAKTQRRSLADALQQSGGEDGGSVVFPPVLVQMLDRL 1026 Query: 181 ESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEG 240 ESEILADRVSEESRRWLASCGLTV QMQ+QMDPVYTPARKIHLYHCDH GLPLALVSTEG Sbjct: 1027 ESEILADRVSEESRRWLASCGLTVAQMQSQMDPVYTPARKIHLYHCDHHGLPLALVSTEG 1086 Query: 241 ATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEESGLYYNRHRYYDPLQGRYITQDP 300 ATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEESGLYYNRHRYYDPLQGRYITQDP Sbjct: 1087 ATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEESGLYYNRHRYYDPLQGRYITQDP 1146 Query: 301 IGLKGGWNFYQYPLNPVQYIDSMGLA----SKYGHLNNG 335 IGLKGGWN Y Y LNP+ ID +GL+ +K G NG Sbjct: 1147 IGLKGGWNLYGYQLNPISDIDPLGLSMWEDAKSGACTNG 1185 Score = 51.0 bits (120), Expect = 1e-04, Method: Composition-based stats. Identities = 50/281 (17%), Positives = 85/281 (30%), Gaps = 39/281 (13%) Query: 12 HYLYRYDRHGRLTEKT-----------DLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQ 60 H +RYD RL ++T DL + + D+ +HYD RL H T Sbjct: 653 HTTFRYDVLDRLIQETGFDGRTQRYHHDLTGKLIRSEDEGLVTHWHYDEADRLTHRT--- 709 Query: 61 YAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKP--------QVTWYGWDGDRL 112 + R+ YD G ++ L R+ T Y G +L Sbjct: 710 -VKGETAERWRYDERGWLSGMKLGDTPLVDFTRDRLHRETLRGFGRYELTTAYTPAG-QL 767 Query: 113 TTIQNDRTRIQTIYQPGSFTPLIRVETATGELA------------KTQRRSLADTLQQSG 160 + + Y LIR+ + + T +L + + Sbjct: 768 QRQHLNSLQYDRDYTWNDNCELIRISSPRQTRSYSYSDSGRLTGVHTTAANLDIRIPYAT 827 Query: 161 GEDGGSVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARK 220 G + P + + + R + R+ LT + + T + Sbjct: 828 DPAGNRLPDPELHPDSTLSMWPDNRIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDER 887 Query: 221 IHLYHCDHRGLPLALVSTEGA---TEWCAEYDEWGNLLNEE 258 H YH D + + T+ A E YD G + + Sbjct: 888 THRYHYDSQHRLVHYTRTQYAEPLVESRYLYDPLGRRVAKR 928 Score = 49.8 bits (117), Expect = 2e-04, Method: Composition-based stats. Identities = 59/374 (15%), Positives = 99/374 (26%), Gaps = 87/374 (23%) Query: 14 LYRYDRHGRLTEKTDLIPEGVIRTDDERTH------------RYHYDSQHRLVHYTRTQY 61 Y +DR G++T R D R RY Y++ L Sbjct: 551 RYDHDRLGQMTAVHREKGLSQYRAYDSRGQLIAVKDMQGHEMRYEYNAAGDLTAVIAPDG 610 Query: 62 AEPLVESRY----------------LYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWY 105 + + YD GR + + L R Q T + Sbjct: 611 SRNGTQYDAWGKAIRTTQGGLTRNMEYDAAGRVIRLTSENGSHTTFRYDVLDRLIQETGF 670 Query: 106 G-----WDGD---RLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRR------- 150 + D +L +++ Y V+ T E + R Sbjct: 671 DGRTQRYHHDLTGKLIRSEDEGLVTHWHYDEADRLTHRTVKGETAERWRYDERGWLSGMK 730 Query: 151 --------SLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGL 202 D L + G +L+ + L + W +C L Sbjct: 731 LGDTPLVDFTRDRLHRETLRGFGRYELTTAYT-PAGQLQRQHLNSLQYDRDYTWNDNCEL 789 Query: 203 T-VEQMQNQMDPVYTPARKIHLYHCDHRGLPLAL---VSTEGATE-------------W- 244 + + Y+ + ++ H L + + G W Sbjct: 790 IRISSPRQTRSYSYSDSGRLTGVHTTAANLDIRIPYATDPAGNRLPDPELHPDSTLSMWP 849 Query: 245 ----------CAEYDEWGNLLNEEN--PHQL--QQLIRLPGQQYDEESGL-YYNRHRYYD 289 YD G L + + P + R YD + L +Y R +Y + Sbjct: 850 DNRIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAE 909 Query: 290 PLQ-GRYITQDPIG 302 PL RY+ DP+G Sbjct: 910 PLVESRYL-YDPLG 922 Score = 45.6 bits (106), Expect = 0.004, Method: Composition-based stats. Identities = 46/269 (17%), Positives = 82/269 (30%), Gaps = 61/269 (22%) Query: 2 WPDNRIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQY 61 +PDN + Y + G L D + + + YD ++R Sbjct: 302 YPDN-LPAAPLVRYGWTPRGELAAVYDRS--------NTQVRSFTYDDKYRGRMVAHRHT 352 Query: 62 AEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQN-DRT 120 P E RY YD GR L+ Y ++ DR+T + DR Sbjct: 353 GRP--EIRYRYDRDGRVTE--------------QLNPAGLSYTYQYEKDRITITDSLDRR 396 Query: 121 RIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRL 180 + G +++ E A G + ++Q ++ Q+ + P V+ ++ R Sbjct: 397 EVLHTQGEGGLKRVVKKEHADGSVTQSQFDAVGRLKAQTDAAGRTTEYSPDVVTGLITR- 455 Query: 181 ESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEG 240 + TP + ++ +H + +G Sbjct: 456 ---------------------------------ITTPDGRASAFYYNHHSQLTSATGPDG 482 Query: 241 ATEWCAEYDEWGNLLNEENPHQLQQLIRL 269 EYDE G L+ E + R Sbjct: 483 LEL-RREYDESGRLIQETAHNGDITRYRY 510 Score = 44.8 bits (104), Expect = 0.007, Method: Composition-based stats. Identities = 49/319 (15%), Positives = 93/319 (29%), Gaps = 59/319 (18%) Query: 12 HYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYH-YDSQHR-----------LVHYTRT 59 YRYDR GR+TE+ + P G+ T R DS R L + Sbjct: 356 EIRYRYDRDGRVTEQLN--PAGLSYTYQYEKDRITITDSLDRREVLHTQGEGGLKRVVKK 413 Query: 60 QYAEPLVESRYLYDPLGRRVAK--------------------RVWRRERDLTGWMSLSRK 99 ++A+ V +D +GR A+ R+ + + + Sbjct: 414 EHADGSVTQS-QFDAVGRLKAQTDAAGRTTEYSPDVVTGLITRITTPDGRASAFYYNHHS 472 Query: 100 PQVTWYGWDGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQS 159 + G DG L ++ R+ R + + + + Sbjct: 473 QLTSATGPDGLELRREYDESGRLIQETAHNGDITRYRYDNPHSDFPCATEDATGSRKTMT 532 Query: 160 GGEDGGSVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPAR 219 G + F + DR+ + + ++ + Sbjct: 533 WSRYGQLLSFT-----DCSGYVTRYDHDRLGQMTAVHREKGLSQYRAYDSRGQLIAVKDM 587 Query: 220 KIH--LYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQYD-- 275 + H Y + G A+++ +G+ +YD WG + + +YD Sbjct: 588 QGHEMRYEYNAAGDLTAVIAPDGS-RNGTQYDAWGKAIRTTQGGLTRN------MEYDAA 640 Query: 276 -------EESGLYYNRHRY 287 E+G + RY Sbjct: 641 GRVIRLTSENGSH-TTFRY 658 >UniRef50_Q31U53 Putative uncharacterized protein n=1 Tax=Shigella boydii Sb227 RepID=Q31U53_SHIBS Length = 927 Score = 445 bits (1145), Expect = e-123, Method: Composition-based stats. Identities = 309/325 (95%), Positives = 316/325 (97%) Query: 1 MWPDNRIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQ 60 MWPDNRIARDAHYLYRYDRHGRLTEKTDLIPEG IRTDDERTH YHYDSQHRLVHYTRTQ Sbjct: 578 MWPDNRIARDAHYLYRYDRHGRLTEKTDLIPEGGIRTDDERTHWYHYDSQHRLVHYTRTQ 637 Query: 61 YAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRT 120 YAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKP+VTWYGWDGDRLTTIQNDRT Sbjct: 638 YAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPEVTWYGWDGDRLTTIQNDRT 697 Query: 121 RIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRL 180 RIQT+YQPGSFTPLIRVETATGELAKTQRRSLAD LQQSGGEDGGSVVFPPVLVQMLDRL Sbjct: 698 RIQTVYQPGSFTPLIRVETATGELAKTQRRSLADALQQSGGEDGGSVVFPPVLVQMLDRL 757 Query: 181 ESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEG 240 ESEILADRVSEESRRWLASCGLTV QM+NQMDPVYTPARKIHLYHCDHRGLPL L+STEG Sbjct: 758 ESEILADRVSEESRRWLASCGLTVAQMKNQMDPVYTPARKIHLYHCDHRGLPLVLISTEG 817 Query: 241 ATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEESGLYYNRHRYYDPLQGRYITQDP 300 ATEWCAEYDEWGNLLNEENPH LQQLIRLPGQQYDEESGLYYNRHRYYDPLQGRYITQDP Sbjct: 818 ATEWCAEYDEWGNLLNEENPHHLQQLIRLPGQQYDEESGLYYNRHRYYDPLQGRYITQDP 877 Query: 301 IGLKGGWNFYQYPLNPVQYIDSMGL 325 IGLKGGWNFYQYPL+PV +D +GL Sbjct: 878 IGLKGGWNFYQYPLSPVNSMDPLGL 902 >UniRef50_P16919 Protein rhsD n=261 Tax=Bacteria RepID=RHSD_ECOLI Length = 1426 Score = 422 bits (1084), Expect = e-116, Method: Composition-based stats. Identities = 261/336 (77%), Positives = 286/336 (85%) Query: 1 MWPDNRIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQ 60 +WPDNRIA DAHY+YR+D +GRLTEKTD IP GVIRTDDERTH YHYDSQHRLV YTR Q Sbjct: 934 VWPDNRIAEDAHYVYRHDEYGRLTEKTDRIPAGVIRTDDERTHHYHYDSQHRLVFYTRIQ 993 Query: 61 YAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRT 120 + EPLVESRYLYDPLGRR+AKRVWRRERDLTGWMSLSRKP+VTWYGWDGDRLTT+Q D T Sbjct: 994 HGEPLVESRYLYDPLGRRMAKRVWRRERDLTGWMSLSRKPEVTWYGWDGDRLTTVQTDTT 1053 Query: 121 RIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRL 180 RIQT+Y+PGSFTPLIRVET GE K QRRSLA+TLQQ G E+G VVFP LV++LDRL Sbjct: 1054 RIQTVYEPGSFTPLIRVETENGEREKAQRRSLAETLQQEGSENGHGVVFPAELVRLLDRL 1113 Query: 181 ESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEG 240 E EI ADRVS ESR WLA CGLTVEQ+ Q++P YTPARK HLYHCDHRGLPLAL+S +G Sbjct: 1114 EEEIRADRVSSESRAWLAQCGLTVEQLARQVEPEYTPARKAHLYHCDHRGLPLALISEDG 1173 Query: 241 ATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEESGLYYNRHRYYDPLQGRYITQDP 300 T W AEYDEWGN LNEENPH + Q RLPGQQ+DEESGLYYNRHRYYDPLQGRYITQDP Sbjct: 1174 NTAWSAEYDEWGNQLNEENPHHVYQPYRLPGQQHDEESGLYYNRHRYYDPLQGRYITQDP 1233 Query: 301 IGLKGGWNFYQYPLNPVQYIDSMGLASKYGHLNNGG 336 +GLKGGWN YQYPLNP+Q ID MGL + +G Sbjct: 1234 MGLKGGWNLYQYPLNPLQQIDPMGLLQTWDDARSGA 1269 Score = 59.4 bits (142), Expect = 3e-07, Method: Composition-based stats. Identities = 58/276 (21%), Positives = 83/276 (30%), Gaps = 52/276 (18%) Query: 12 HYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYL 71 Y YDR G++T + R YD++ RL Q E+RY Sbjct: 553 QTRYEYDRFGQMTAVHREEGISLYR---------RYDNRGRLTSVKDAQG----RETRYE 599 Query: 72 YDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQPGSF 131 Y+ G DLT ++ T Y G ++T Q TR G Sbjct: 600 YNAAG------------DLTAVITPDGNRSETQYDAWGKAVSTTQGGLTRSMEYDAAGRV 647 Query: 132 TPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSE 191 L + D L Q GG DG + + L L + E E L Sbjct: 648 ISLTNENGS----HSVFSYDALDRLVQQGGFDGRTQRYHYDLTGKLTQSEDEGL------ 697 Query: 192 ESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEW 251 W + +P H + D ++ +S YD+ Sbjct: 698 -VILWYYDESDRITHRTVNGEPAEQWQYDGHGWLTD-----ISHLSEGHRVAVHYGYDDK 751 Query: 252 GNLLNE----ENPHQLQQLIRLPGQQYDEESGLYYN 283 G L E ENP + L + E+ YN Sbjct: 752 GRLTGECQTVENPETGELL-------WQHETKHAYN 780 Score = 58.3 bits (139), Expect = 7e-07, Method: Composition-based stats. Identities = 46/283 (16%), Positives = 92/283 (32%), Gaps = 33/283 (11%) Query: 5 NRIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEP 64 +R A YRYD GR+ E+ + ++ DS +R T+ Sbjct: 353 HRYAGRPEMRYRYDDTGRVVEQLNPAGLSYRYLYEQDRITVT-DSLNR-REVLHTEGGAG 410 Query: 65 LVE-----------SRYLYDPLGRRVAKRVWRRERDLTGWMSLSR---------KPQVTW 104 L +R YD GR A+ R G +S + + Sbjct: 411 LKRVVKKELADGSVTRSGYDAAGRLTAQTDAAGRRTEYGLNVVSGDITDITTPDGRETKF 470 Query: 105 YGWDGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDG 164 Y DG++LT + + +++ + L+ + +GE + + L + + Sbjct: 471 YYNDGNQLTAVVSPDG-LESRREYDEPGRLVSETSRSGETVRYRYDDAHSELPATTTDAT 529 Query: 165 GSVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQM---------QNQMDPVY 215 GS ++ + E R+ + E+ + ++ V Sbjct: 530 GSTRQMTWSRYGQLLAFTDCSGYQTRYEYDRFGQMTAVHREEGISLYRRYDNRGRLTSVK 589 Query: 216 TPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEE 258 + Y + G A+++ +G +YD WG ++ Sbjct: 590 DAQGRETRYEYNAAGDLTAVITPDGN-RSETQYDAWGKAVSTT 631 Score = 48.6 bits (114), Expect = 5e-04, Method: Composition-based stats. Identities = 45/290 (15%), Positives = 71/290 (24%), Gaps = 61/290 (21%) Query: 14 LYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQH--RLVHYTRTQYAEPLVESRYL 71 Y Y G L D + + + YD+QH R+V + E RY Sbjct: 317 RYTYTEAGELLAVYDRS--------NTQVRAFTYDAQHPGRMVAHRYAGRP----EMRYR 364 Query: 72 YDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQPGSF 131 YD GR V L+ Y ++ DR+T + R + G+ Sbjct: 365 YDDTGRVVE--------------QLNPAGLSYRYLYEQDRITVTDSLNRREVLHTEGGAG 410 Query: 132 TPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVF-----------------PPVLV 174 + + A L G + Sbjct: 411 LKRVVKKELADGSVTRSGYDAAGRLTAQTDAAGRRTEYGLNVVSGDITDITTPDGRETKF 470 Query: 175 QMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPV----YTPARKIHLYHCDHRG 230 D + + ESRR G V + + V ++ D G Sbjct: 471 YYNDGNQLTAVVSPDGLESRREYDEPGRLVSETSRSGETVRYRYDDAHSELPATTTDATG 530 Query: 231 LPLAL-----------VSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRL 269 + G EYD +G + + R Sbjct: 531 STRQMTWSRYGQLLAFTDCSGYQT-RYEYDRFGQMTAVHREEGISLYRRY 579 >UniRef50_UPI0001B52C8C protein, rhs-like protein n=4 Tax=Enterobacteriaceae RepID=UPI0001B52C8C Length = 243 Score = 401 bits (1031), Expect = e-110, Method: Composition-based stats. Identities = 243/243 (100%), Positives = 243/243 (100%) Query: 235 LVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEESGLYYNRHRYYDPLQGR 294 LVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEESGLYYNRHRYYDPLQGR Sbjct: 1 LVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEESGLYYNRHRYYDPLQGR 60 Query: 295 YITQDPIGLKGGWNFYQYPLNPVQYIDSMGLASKYGHLNNGGYGARPNKPPTPDPSKLPD 354 YITQDPIGLKGGWNFYQYPLNPVQYIDSMGLASKYGHLNNGGYGARPNKPPTPDPSKLPD Sbjct: 61 YITQDPIGLKGGWNFYQYPLNPVQYIDSMGLASKYGHLNNGGYGARPNKPPTPDPSKLPD 120 Query: 355 IAKQLRLPYPIDQASSAPNVFKTFFRALSPYDYTLYCRKWVKPNLTCTPQDDSQYPGMDT 414 IAKQLRLPYPIDQASSAPNVFKTFFRALSPYDYTLYCRKWVKPNLTCTPQDDSQYPGMDT Sbjct: 121 IAKQLRLPYPIDQASSAPNVFKTFFRALSPYDYTLYCRKWVKPNLTCTPQDDSQYPGMDT 180 Query: 415 KTASDYLPQTNWPTTQLPPGYTCAEPYLFPDINKPDGPATAGIDDLGEILAKMKQRTSRG 474 KTASDYLPQTNWPTTQLPPGYTCAEPYLFPDINKPDGPATAGIDDLGEILAKMKQRTSRG Sbjct: 181 KTASDYLPQTNWPTTQLPPGYTCAEPYLFPDINKPDGPATAGIDDLGEILAKMKQRTSRG 240 Query: 475 IRK 477 IRK Sbjct: 241 IRK 243 >UniRef50_C1M8X5 Core protein n=2 Tax=Citrobacter RepID=C1M8X5_9ENTR Length = 1359 Score = 389 bits (1000), Expect = e-107, Method: Composition-based stats. Identities = 223/330 (67%), Positives = 261/330 (79%), Gaps = 3/330 (0%) Query: 1 MWPDNRIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQ 60 +W DNRI DA YLYRYDR+GRLTEKTD IP+G IR DERTHRY YD+QHRLVHY RTQ Sbjct: 901 VWADNRITEDAQYLYRYDRYGRLTEKTDRIPDGAIRMYDERTHRYSYDNQHRLVHYLRTQ 960 Query: 61 YAEPLVESRYLYDPLGRRVAKRVWRRERDL--TGWMSLSRKPQVTWYGWDGDRLTTIQND 118 Y + E RYLYDPLGRR+ K++W+RER+ M+LS +P TWYGWDGDRLTT Q Sbjct: 961 YGKKQAEGRYLYDPLGRRIGKQMWKREREHPDHDQMALSHRPYTTWYGWDGDRLTTTQTA 1020 Query: 119 RTRIQTIYQPGSFTPLIRVETATGELAKTQR-RSLADTLQQSGGEDGGSVVFPPVLVQML 177 + R+QTIY+PGSFTPLIRVETAT L +R R+LA+ L+Q G EDG VVFPP LVQML Sbjct: 1021 QRRVQTIYEPGSFTPLIRVETATEALDALRRHRTLAEKLRQEGSEDGAGVVFPPALVQML 1080 Query: 178 DRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVS 237 DRLE E+ A +S+E+R+WLA CGLT EQM QM+P+ P R ++LYHCDHRGLPLAL+ Sbjct: 1081 DRLEGEMRAGVISDENRQWLAGCGLTPEQMVAQMEPLPVPERTLYLYHCDHRGLPLALIR 1140 Query: 238 TEGATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEESGLYYNRHRYYDPLQGRYIT 297 +GA W AEYDEWGN+L E+NPH LQQLIRLPGQQYD+ESGL+YNRHRYY+P GRYIT Sbjct: 1141 QDGAISWRAEYDEWGNVLREDNPHNLQQLIRLPGQQYDDESGLHYNRHRYYNPGLGRYIT 1200 Query: 298 QDPIGLKGGWNFYQYPLNPVQYIDSMGLAS 327 QDPIGL GG N YQYPLNPV +D +GL + Sbjct: 1201 QDPIGLAGGLNPYQYPLNPVTEVDPLGLWA 1230 Score = 52.5 bits (124), Expect = 3e-05, Method: Composition-based stats. Identities = 39/249 (15%), Positives = 61/249 (24%), Gaps = 36/249 (14%) Query: 12 HYLYRYDRHGRLTEKTDLIPEGVIRTDD------------ERTHRYHYDSQHRLVHYTRT 59 Y YDR G++T R D R RY Y L Sbjct: 527 ETRYDYDRFGQVTAIHQEDGLSQYRAYDTRGRLVSQRDAAGRETRYEYSDAGDLTTVIAP 586 Query: 60 QYAEPLVES----------------RYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVT 103 + + R YD GR + L R Q T Sbjct: 587 DSSRTETQYDAGGRPVSITAGGLTRRMQYDAAGRVTQLTNENGSHTSFTYDLLDRLTQQT 646 Query: 104 -------WYGWD-GDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADT 155 YG++ G +L +++ Y V E + R Sbjct: 647 GFDGRTQRYGYNTGGQLVRSEDEGLVTLWHYDESDRLTHRTVNGEPAEQWQYNERGWLAE 706 Query: 156 LQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVY 215 + +V + L R + + E G + + ++M Sbjct: 707 ISHLSEGHRVTVHYGYDEKGRLIREQQVVHHPETDEPLWHHETQHGYSDAGLAHRMTSDK 766 Query: 216 TPARKIHLY 224 PA + Y Sbjct: 767 LPAVEWLTY 775 Score = 50.6 bits (119), Expect = 1e-04, Method: Composition-based stats. Identities = 55/307 (17%), Positives = 91/307 (29%), Gaps = 53/307 (17%) Query: 12 HYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHR-----------LVHYTRTQ 60 YRYD GR+ E+ + R + + DS HR L + + Sbjct: 334 QTTYRYDAAGRVVEQYNPAG-LSYRYEYGKNAVTITDSLHRREVLHTAGEGGLKRVVKKE 392 Query: 61 YAEPLVE-SRY--------LYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWY------ 105 YA+ V S Y D GR+ R ++T +S + V +Y Sbjct: 393 YADGSVTCSEYNPVGWLTAQTDAAGRKTEYRYSIASGNVTEIISPDGRKTVFYYNGGRQL 452 Query: 106 ----GWDGDR-----------LTTIQNDRTRIQTIY-QPGSFTPLIRVETATGELAKTQR 149 DG R + +Y P S +P E ATG + Sbjct: 453 TSVIHPDGLREKREYDEHGRLTAQTSRQGNTTRYVYADPHSESPCT-SEDATGSKKQMTW 511 Query: 150 RSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSEESRRWL-----ASCGLTV 204 L + + Q+ + + L+ + ++R L A+ T Sbjct: 512 SRHGQLLSFTDCSGYETRYDYDRFGQVTAIHQEDGLSQYRAYDTRGRLVSQRDAAGRETR 571 Query: 205 EQMQNQMD--PVYTPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQ 262 + + D V P D G P+++ G +YD G + N + Sbjct: 572 YEYSDAGDLTTVIAPDSSRTETQYDAGGRPVSIT--AGGLTRRMQYDAAGRVTQLTNENG 629 Query: 263 LQQLIRL 269 Sbjct: 630 SHTSFTY 636 Score = 50.2 bits (118), Expect = 2e-04, Method: Composition-based stats. Identities = 58/313 (18%), Positives = 94/313 (30%), Gaps = 46/313 (14%) Query: 2 WPDNRIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQ--HRLVHYTRT 59 +PDN + Y Y G L V + R+ YD+ R+V + Sbjct: 280 YPDN-LPTSPLVRYDYSPRGEL--------AAVYDRGGVQVRRFDYDADTPGRMVAHQYA 330 Query: 60 QYAEPLVESRYLYDPLGRRVAK--------RVWRRERDLTGWMSLSRKPQVTWYGWDGDR 111 ++ Y YD GR V + R + +T SL R+ + G G + Sbjct: 331 GRP----QTTYRYDAAGRVVEQYNPAGLSYRYEYGKNAVTITDSLHRREVLHTAGEGGLK 386 Query: 112 LTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPP 171 + T + L A G + + + + + DG VF Sbjct: 387 RVVKKEYADGSVTCSEYNPVGWLTAQTDAAGRKTEYRYSIASGNVTEIISPDGRKTVFYY 446 Query: 172 VLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCD-HRG 230 + L + +R G Q Q + + D H Sbjct: 447 NGGRQLTSVIHP-----DGLREKREYDEHGRLTAQTSRQGNT-------TRYVYADPHSE 494 Query: 231 LPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLI---RLPGQQY--DEESGLYYNRH 285 P G+ + + G LL+ + + R GQ +E GL R Sbjct: 495 SPCTSEDATGSKK-QMTWSRHGQLLSFTDCSGYETRYDYDRF-GQVTAIHQEDGLSQYRA 552 Query: 286 RYYDPLQGRYITQ 298 YD GR ++Q Sbjct: 553 --YDTR-GRLVSQ 562 Score = 45.2 bits (105), Expect = 0.005, Method: Composition-based stats. Identities = 35/213 (16%), Positives = 59/213 (27%), Gaps = 17/213 (7%) Query: 12 HYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYL 71 + Y YD G LT + +T Y Y RL T + Y Sbjct: 832 NRDYGYDGAGHLTRISTP----------RQTREYDYSQTGRLTGVRMTADGLD-IRLPYA 880 Query: 72 YDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQ----TIYQ 127 DP G R+ + + W +R + Y + DR + RI +Y Sbjct: 881 TDPAGNRLPDPEFYPDSSRKVWAD-NRITEDAQYLYRYDRYGRLTEKTDRIPDGAIRMYD 939 Query: 128 PGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESE-ILA 186 + + +TQ + G + + + L+ Sbjct: 940 ERTHRYSYDNQHRLVHYLRTQYGKKQAEGRYLYDPLGRRIGKQMWKREREHPDHDQMALS 999 Query: 187 DRVSEESRRWLASCGLTVEQMQNQMDPVYTPAR 219 R W T + Q ++ +Y P Sbjct: 1000 HRPYTTWYGWDGDRLTTTQTAQRRVQTIYEPGS 1032 >UniRef50_UPI0001C341D4 protein RhsA n=1 Tax=Citrobacter youngae ATCC 29220 RepID=UPI0001C341D4 Length = 1365 Score = 388 bits (996), Expect = e-106, Method: Composition-based stats. Identities = 226/343 (65%), Positives = 262/343 (76%), Gaps = 3/343 (0%) Query: 1 MWPDNRIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQ 60 +W DNRI DA YLYRYDR+GRLTEKTD IP+G IR DERTHRY YD+QHRLVH RTQ Sbjct: 900 IWADNRITEDAQYLYRYDRYGRLTEKTDRIPDGAIRMYDERTHRYSYDNQHRLVHCVRTQ 959 Query: 61 YAEPLVESRYLYDPLGRRVAKRVWRRERD--LTGWMSLSRKPQVTWYGWDGDRLTTIQND 118 + E E RY+YDP GRRV KRVW+RE +LS +P TWYGWDGDRLTT Q Sbjct: 960 HGETQAEGRYIYDPQGRRVGKRVWKREPVHWSDTRTALSHRPYTTWYGWDGDRLTTTQTA 1019 Query: 119 RTRIQTIYQPGSFTPLIRVETATGELAKTQR-RSLADTLQQSGGEDGGSVVFPPVLVQML 177 +TR+QTIY+PGSFTPLIRVETAT L +R R+LA+ L+Q G DG VVFPP LV ML Sbjct: 1020 QTRVQTIYEPGSFTPLIRVETATEALDALRRHRTLAEKLRQEGSGDGAGVVFPPALVNML 1079 Query: 178 DRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVS 237 DRLE E+ A +S+ +R+WLA CGLT EQM QM+P+ P R +HLYHCDHRGLPLAL+S Sbjct: 1080 DRLEGELRAGVISDANRQWLAGCGLTPEQMAAQMEPLPVPERTLHLYHCDHRGLPLALIS 1139 Query: 238 TEGATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEESGLYYNRHRYYDPLQGRYIT 297 +GA W AEYDEWGN+L E+NPH LQQLIRLPGQQYD+ESGL+YNRHRYY+P GRYIT Sbjct: 1140 QDGAISWRAEYDEWGNVLREDNPHNLQQLIRLPGQQYDDESGLHYNRHRYYNPGLGRYIT 1199 Query: 298 QDPIGLKGGWNFYQYPLNPVQYIDSMGLASKYGHLNNGGYGAR 340 QDPIGLKGGWN Y+YPLNPV+YID GL + + + G R Sbjct: 1200 QDPIGLKGGWNLYKYPLNPVEYIDPSGLDVRLVNTDAVGGWHR 1242 Score = 54.8 bits (130), Expect = 7e-06, Method: Composition-based stats. Identities = 48/305 (15%), Positives = 87/305 (28%), Gaps = 28/305 (9%) Query: 1 MWPDNRIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQ--HRLVHYTR 58 ++PDN + Y Y G L D + R+ YD++ R+V + Sbjct: 279 LYPDN-LPASPLARYAYSPRGELAAVYDR--------GGVQVRRFDYDAETPGRMVAHQY 329 Query: 59 TQYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQND 118 ++ Y YD GR V + + + + + Sbjct: 330 AGRP----QTSYRYDAAGRVVEQLNPAGLSYRYEYQRDHVAITDSLHRREVLHTAGEGGL 385 Query: 119 RTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLD 178 + ++ Y GS T T R A + V + Sbjct: 386 KRVVKKEYADGSVT----CSEYNPAGWLTARTDAAGRKTEYRYSIASGNVTEIISPDGRK 441 Query: 179 RLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCD-HRGLPLALVS 237 +++ + L ++ + D H P A Sbjct: 442 TAFYYNGGRQLTSVTHPDGLREKLAYDEQGRLTAQTSRQGSTTRYVYADPHSEYPCARED 501 Query: 238 TEGATEWCAEYDEWGNLLNEENPHQLQQLIRLP--GQQ--YDEESGLYYNRHRYYDPLQG 293 G+ + + +G LL+ + + GQ +E GL R+R YD G Sbjct: 502 ATGSKK-QMTWSHYGQLLSVSDCSGYETRYEYDRFGQLTAMHQEEGLS--RYRAYDTR-G 557 Query: 294 RYITQ 298 R ++Q Sbjct: 558 RPVSQ 562 Score = 51.7 bits (122), Expect = 5e-05, Method: Composition-based stats. Identities = 58/307 (18%), Positives = 91/307 (29%), Gaps = 53/307 (17%) Query: 12 HYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHR-----------LVHYTRTQ 60 YRYD GR+ E+ + R + +R H DS HR L + + Sbjct: 334 QTSYRYDAAGRVVEQLNPAG-LSYRYEYQRDHVAITDSLHRREVLHTAGEGGLKRVVKKE 392 Query: 61 YAEPLVE-SRY--------LYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWY------ 105 YA+ V S Y D GR+ R ++T +S + +Y Sbjct: 393 YADGSVTCSEYNPAGWLTARTDAAGRKTEYRYSIASGNVTEIISPDGRKTAFYYNGGRQL 452 Query: 106 ----GWDGDR-----------LTTIQNDRTRIQTIY-QPGSFTPLIRVETATGELAKTQR 149 DG R + + +Y P S P R E ATG + Sbjct: 453 TSVTHPDGLREKLAYDEQGRLTAQTSRQGSTTRYVYADPHSEYPCAR-EDATGSKKQMTW 511 Query: 150 RSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSEESR-----RWLASCGLTV 204 L S + Q+ + E L+ + ++R + A+ T Sbjct: 512 SHYGQLLSVSDCSGYETRYEYDRFGQLTAMHQEEGLSRYRAYDTRGRPVSQHDAAGRETY 571 Query: 205 EQMQNQMD--PVYTPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQ 262 + D V P D G P+++ G YD G + N + Sbjct: 572 YEYSEAGDLTAVIAPDGSRTETQHDAGGRPVSIT--AGGLTRQITYDAAGRVTQLTNENG 629 Query: 263 LQQLIRL 269 Sbjct: 630 SHTEFTY 636 Score = 50.2 bits (118), Expect = 2e-04, Method: Composition-based stats. Identities = 33/248 (13%), Positives = 53/248 (21%), Gaps = 36/248 (14%) Query: 12 HYLYRYDRHGRLTEKTDLIPEGVIRTDD------------ERTHRYHYDSQHRLVHYTRT 59 Y YDR G+LT R D R Y Y L Sbjct: 527 ETRYEYDRFGQLTAMHQEEGLSRYRAYDTRGRPVSQHDAAGRETYYEYSEAGDLTAVIAP 586 Query: 60 QYAEPLVES----------------RYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVT 103 + + + YD GR + +L R Q T Sbjct: 587 DGSRTETQHDAGGRPVSITAGGLTRQITYDAAGRVTQLTNENGSHTEFTYDALDRLTQQT 646 Query: 104 -------WYGWD-GDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADT 155 YG++ G +L +++ Y V E + Sbjct: 647 GFDGRTQRYGYNTGGQLVRSEDEDLVTLWHYDDADRLTHRTVNGEPAEQWQYNDHGWLTG 706 Query: 156 LQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVY 215 + +V + L + + A + L Sbjct: 707 ISHLSEGHRVAVHYGYDEKGRLLSEKQTVHAPQTQTLLWEHLTQHDYQNGLANKTTHDHL 766 Query: 216 TPARKIHL 223 P + Sbjct: 767 PPVAWLTY 774 Score = 49.0 bits (115), Expect = 4e-04, Method: Composition-based stats. Identities = 36/213 (16%), Positives = 59/213 (27%), Gaps = 17/213 (7%) Query: 12 HYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYL 71 + Y YD G LT + +T Y Y RL R + Y Sbjct: 831 NRDYGYDGAGHLTRISTP----------HQTREYGYSQTGRLTGV-RMIADGLDIRLPYA 879 Query: 72 YDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQ----TIYQ 127 DP G R+ + + W +R + Y + DR + RI +Y Sbjct: 880 TDPAGNRLPDPEFYPDSSRKIWAD-NRITEDAQYLYRYDRYGRLTEKTDRIPDGAIRMYD 938 Query: 128 PGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQML-DRLESEILA 186 + + +TQ + G V + + L+ Sbjct: 939 ERTHRYSYDNQHRLVHCVRTQHGETQAEGRYIYDPQGRRVGKRVWKREPVHWSDTRTALS 998 Query: 187 DRVSEESRRWLASCGLTVEQMQNQMDPVYTPAR 219 R W T + Q ++ +Y P Sbjct: 999 HRPYTTWYGWDGDRLTTTQTAQTRVQTIYEPGS 1031 >UniRef50_B5PJT7 Protein RhsD n=2 Tax=Enterobacteriaceae RepID=B5PJT7_SALET Length = 429 Score = 319 bits (816), Expect = 2e-85, Method: Composition-based stats. Identities = 186/305 (60%), Positives = 212/305 (69%), Gaps = 6/305 (1%) Query: 58 RTQYAEPLVESRYLYDPLGRRVAKRVWRRERD--LTGWMSLSRKPQVTWYGWDGDRLTTI 115 R Q+ E RYLYDPLGRRV KRVW+RE M LSR+P VTWYGW+GDRLTTI Sbjct: 2 RIQHNTIQAEGRYLYDPLGRRVGKRVWKRELVHWSNTRMELSRRPYVTWYGWEGDRLTTI 61 Query: 116 QNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQ 175 Q ++RIQT+Y PGSFTPL+R+ET E AK Q RSLA+ L Q G EDG +V P L Sbjct: 62 QTGQSRIQTVYAPGSFTPLVRIETDAAEQAKAQHRSLAEKLSQEGSEDGQAVQLPAALTA 121 Query: 176 MLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLAL 235 MLDRLE E+ + VSEESR WLA CGLT EQM Q++P YTP RKIHLYHCD RGLPLAL Sbjct: 122 MLDRLEGELRRNAVSEESRAWLAGCGLTPEQMAGQLEPEYTPQRKIHLYHCDQRGLPLAL 181 Query: 236 VSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEESGLYYNRHRYYDPLQGRY 295 ++ + W EYDEWGNL EENP L+Q+IRLPGQQYDEESGLYYNRHRYY+P QGRY Sbjct: 182 ITPDNTVAWRGEYDEWGNLSGEENPAHLEQVIRLPGQQYDEESGLYYNRHRYYNPGQGRY 241 Query: 296 ITQDPIGLKGGWNFYQYPLNPVQYIDSMGLA----SKYGHLNNGGYGARPNKPPTPDPSK 351 ITQDPIGL+GGWN Y YPLNPV ID +GL+ +K G +G A Sbjct: 242 ITQDPIGLRGGWNLYNYPLNPVSEIDPLGLSMWDDAKSGSCTDGFCNALSFIIGPSKFDS 301 Query: 352 LPDIA 356 D A Sbjct: 302 EEDAA 306 >UniRef50_O52663 Core protein (Fragment) n=5 Tax=Enterobacteriaceae RepID=O52663_ECOLX Length = 350 Score = 272 bits (694), Expect = 3e-71, Method: Composition-based stats. Identities = 153/213 (71%), Positives = 171/213 (80%) Query: 120 TRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDR 179 TRIQT+YQPGSF PLIR+ET GE K QRRSLA+ LQQ G EDG VVFP LV++LDR Sbjct: 1 TRIQTVYQPGSFAPLIRIETDNGEREKAQRRSLAEKLQQEGSEDGHGVVFPAELVRLLDR 60 Query: 180 LESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTE 239 LE EI ADRVS ESR WLA CGLTVEQ+ Q++P YTPARK+H YHCDHRGLPLAL+S + Sbjct: 61 LEEEIRADRVSSESRAWLAQCGLTVEQLARQVEPEYTPARKVHFYHCDHRGLPLALISED 120 Query: 240 GATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEESGLYYNRHRYYDPLQGRYITQD 299 G T W EYDEWGN LNEENP+ L Q RLPGQQ+DEESGLYYNR+RYYDPLQGRYITQD Sbjct: 121 GNTAWRGEYDEWGNQLNEENPYYLHQPYRLPGQQHDEESGLYYNRNRYYDPLQGRYITQD 180 Query: 300 PIGLKGGWNFYQYPLNPVQYIDSMGLASKYGHL 332 PIGL GGWN Y YPLNP+ +D +GL + Y L Sbjct: 181 PIGLAGGWNLYNYPLNPIIRMDPLGLYNLYQLL 213 >UniRef50_A1TV35 YD repeat protein n=2 Tax=Acidovorax RepID=A1TV35_ACIAC Length = 1679 Score = 260 bits (665), Expect = 6e-68, Method: Composition-based stats. Identities = 113/366 (30%), Positives = 158/366 (43%), Gaps = 49/366 (13%) Query: 2 WPDNRI-----------ARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQ 50 WP NRI +DA Y+YD G + + D R R HYD+ Sbjct: 1192 WPGNRIGWSTVQRADSHQKDALIRYQYDAFGNRVQ---------VLHPDGRIQRLHYDAL 1242 Query: 51 HRLVHYTRTQYAEPLVE--SRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWD 108 H+L + + + Y YD LGRR++K V+ L T+ GWD Sbjct: 1243 HQLREVCQREQLGGAWRLIASYRYDALGRRLSKTVY---------DQLDHGGTTTYAGWD 1293 Query: 109 GDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGG-SV 167 GDRL + + T+Y+PGSF PL+R+E + Q D+ + + Sbjct: 1294 GDRLIHTEGAKGFFHTLYEPGSFVPLLRLERSKAIPTAMQVLLALDSTEDDDSDAPALGR 1353 Query: 168 VFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQ-----MQNQMDPVYTPARK-- 220 F L + L +L + + LA+ + + N +D + Sbjct: 1354 NFFAALPRAQRDLLEGVLHSAIGTCAEASLANLSSNLPLDVRVLLANGLDEIRGRRTNFA 1413 Query: 221 ------IHLYHCDHRGLPLALVSTEGA----TEWCAEYDEWGNLLNEENPHQLQQLIRLP 270 I CDH G P+A+V G W A Y WG L E NP+ + Q IR Sbjct: 1414 RAEDTCIRHILCDHLGTPIAMVDANGRHSGLLTWAATYHSWGALREEYNPNDISQPIRFQ 1473 Query: 271 GQQYDEESGLYYNRHRYYDPLQGRYITQDPIGLKGGWNFYQYPLNPVQYIDSMGLASKYG 330 GQQ+D E+GL+YNR RYYDP G+Y+TQDPIGL GG + Y YP++P +ID GL Sbjct: 1474 GQQFDAETGLHYNRLRYYDPSLGQYLTQDPIGLLGGNDKYIYPVSPTGWIDPTGLNPLAA 1533 Query: 331 HLNNGG 336 G Sbjct: 1534 CAVPGP 1539 Score = 56.3 bits (134), Expect = 2e-06, Method: Composition-based stats. Identities = 46/260 (17%), Positives = 76/260 (29%), Gaps = 64/260 (24%) Query: 15 YRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYLYD- 73 YRYD G L E V+ D R+ YD+ HR+ + Q RY+Y+ Sbjct: 322 YRYDSAGNLAE--------VLGADGTVLRRFGYDALHRMTEHQVRQGP----RHRYVYED 369 Query: 74 --PLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGD------------RLTTIQND- 118 GRR + W + + ++ + G R +T+ D Sbjct: 370 QTAQGRR---QGWAARPGARVAEQHNEEGLSYFFDYGGAPVAAGDGPAASVRSSTVVRDS 426 Query: 119 -RTRIQTIYQ-PGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQM 176 ++ G L+R+ G + S L + + ++ Sbjct: 427 LGRTTTYHFEGEGGLKRLVRLTGPDGAEQSYRHDSAGRRLSATDALGRTTWWRYDGAGRL 486 Query: 177 LDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALV 236 L + + +RW A+ GL LA Sbjct: 487 LGVQGPDGRS-----TQQRWGAAGSA-------------------------QDGLLLASQ 516 Query: 237 STEGATEWCAEYDEWGNLLN 256 G YD+WG L+ Sbjct: 517 DAAG-LRTHYRYDDWGRLVE 535 Score = 52.1 bits (123), Expect = 5e-05, Method: Composition-based stats. Identities = 41/249 (16%), Positives = 70/249 (28%), Gaps = 47/249 (18%) Query: 7 IARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLV 66 + A Y+YD G+L RY YD+ RL E + Sbjct: 1079 LRTIAQRRYQYDALGQLVGVQTP----------GEATRYGYDAWQRLTAM-HRAGPEGEL 1127 Query: 67 ESRYLYDPLGRR------------------------VAKRVWRRERDLTGWMSLSRKPQV 102 ++ D G R V + + DL + Sbjct: 1128 HEHWVLDAAGNRLPSFGGAQAAIPHAGRQPEAWAREVRENLHDAGFDLLRANGGPGESSG 1187 Query: 103 TWYGWDGDRLTTIQNDRTRIQT-----IYQPGSFTPLIRVETATGELAKTQRRSLADTLQ 157 T W G+R+ R YQ +F ++V G + + +L + Sbjct: 1188 TVTHWPGNRIGWSTVQRADSHQKDALIRYQYDAFGNRVQVLHPDGRIQRLHYDALHQLRE 1247 Query: 158 QSGGEDGGSVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTP 217 E G +++ + L R+S+ L G T + ++T Sbjct: 1248 VCQREQLGGA------WRLIASYRYDALGRRLSKTVYDQLDHGGTTTYAGWDGDRLIHTE 1301 Query: 218 ARKIHLYHC 226 K +H Sbjct: 1302 GAKG-FFHT 1309 Score = 51.0 bits (120), Expect = 1e-04, Method: Composition-based stats. Identities = 40/299 (13%), Positives = 69/299 (23%), Gaps = 51/299 (17%) Query: 9 RDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVES 68 A YR+D GR TD + RT + YD RL+ Sbjct: 451 DGAEQSYRHDSAGRRLSATDAL---------GRTTWWRYDGAGRLLGVQGPDGRSTQQRW 501 Query: 69 ----------------------RYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYG 106 Y YD GR V + R + + + Sbjct: 502 GAAGSAQDGLLLASQDAAGLRTHYRYDDWGRLVEVAMLPEGRTDEAATLQALITRFEYEQ 561 Query: 107 WDGDRLTTIQN----------------DRTRIQTIYQPGSFTPLIRVETATGELAKTQRR 150 D T D ++ Y + + R +G + Sbjct: 562 PQQDAGTGAVTFPPHTLAWCDQPVAVIDAQGGRSQYAYNACGQITRHTDCSGHSQTWRHG 621 Query: 151 SLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQ 210 + + ++ + + + L + + + + Sbjct: 622 AWGEVVEAVDALGQRTRLHHAMQQGALRLVGVQQPGNTAVRYRWNETGRMAAITHGTHDV 681 Query: 211 MDPVYTPARK--IHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLI 267 ++ PA Y D G + V G YD G L N + Sbjct: 682 LEGTGEPAGTSATIAYRHDLWGRVVEQV-QAGRGV-QLRYDVAGRLQELVNENGDVTRF 738 Score = 48.6 bits (114), Expect = 5e-04, Method: Composition-based stats. Identities = 47/251 (18%), Positives = 68/251 (27%), Gaps = 41/251 (16%) Query: 19 RHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYLYDPLGRR 78 GR+T G +RT +R RY YD+ +LV P +RY YD R Sbjct: 1068 AAGRIT-----PALGPLRTIAQR--RYQYDALGQLVGVQT-----PGEATRYGYDAWQRL 1115 Query: 79 VAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQPGSFTPLIRVE 138 A E +L + G+RL + + I Sbjct: 1116 TAMHRAGPEGELH---------EHWVLDAAGNRLPSFGGAQAAIPHA------------G 1154 Query: 139 TATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSEESRRWLA 198 A+ R +L D +GG + R + L Sbjct: 1155 RQPEAWAREVRENLHDAGFDLLRANGGPGESSGTVTHWPGNRIGWSTVQRADSHQKDALI 1214 Query: 199 SCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEG-----ATEWCAEYDEWGN 253 + Q V P +I H D + E YD G Sbjct: 1215 RYQYDAFGNRVQ---VLHPDGRIQRLHYDALHQLREVCQREQLGGAWRLIASYRYDALGR 1271 Query: 254 LLNEENPHQLQ 264 L++ QL Sbjct: 1272 RLSKTVYDQLD 1282 Score = 45.6 bits (106), Expect = 0.005, Method: Composition-based stats. Identities = 33/208 (15%), Positives = 49/208 (23%), Gaps = 20/208 (9%) Query: 62 AEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTR 121 P Y YD G + + + +G+D T R Sbjct: 314 PRPQPLVGYRYDSAGN-------------LAEVLGADGTVLRRFGYDALHRMTEHQVRQG 360 Query: 122 IQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLE 181 + Y T R + + + GG+ V R Sbjct: 361 PRHRYVYEDQTAQGRRQGWAARPGARVAEQHNEEGLSYFFDYGGAPVAAGDGPAASVRSS 420 Query: 182 SEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGA 241 + + + + GL D Y D G L+ G Sbjct: 421 TVVRDSLGRTTTYHFEGEGGLKRLVRLTGPDGAEQS------YRHDSAGRRLSATDALGR 474 Query: 242 TEWCAEYDEWGNLLNEENPHQLQQLIRL 269 T W YD G LL + P R Sbjct: 475 TTW-WRYDGAGRLLGVQGPDGRSTQQRW 501 Score = 43.3 bits (100), Expect = 0.020, Method: Composition-based stats. Identities = 34/205 (16%), Positives = 57/205 (27%), Gaps = 33/205 (16%) Query: 10 DAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESR 69 A YR+D GR+ E+ R + YD RL +R Sbjct: 692 SATIAYRHDLWGRVVEQVQA----------GRGVQLRYDVAGRLQELVNENGD----VTR 737 Query: 70 YLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQPG 129 +++D R V + + QV Y G +LT + PG Sbjct: 738 FVHDVADRLV------------QEVGFDGRSQVYGYDAAG-QLTHTGDGHGEGHH---PG 781 Query: 130 SFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRV 189 + R E + + + +L E + Sbjct: 782 A---AARPELGAVVRTRLHYDLGGRLVARVAVRLPAPEPSDTEPHAILQIQRFEHTSAGA 838 Query: 190 SEESRRWLASCGLTVEQMQNQMDPV 214 +++R W A VE M + + Sbjct: 839 LQQTRTWEAELPHGVEPMASPTGSM 863 >UniRef50_A1TJG7 YD repeat protein n=4 Tax=Proteobacteria RepID=A1TJG7_ACIAC Length = 1604 Score = 259 bits (661), Expect = 2e-67, Method: Composition-based stats. Identities = 106/420 (25%), Positives = 149/420 (35%), Gaps = 97/420 (23%) Query: 4 DNRIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAE 63 NR+ + YD GRL K R YD+ HR++ + + Sbjct: 1150 HNRVKVLQDKRFDYDGFGRLVRK---------RIGGHTELHCRYDALHRMIAASVIRAGR 1200 Query: 64 PL----VESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDR 119 RY YDPLGRR+AK T + W+G RL Sbjct: 1201 DGEPIRQVFRYRYDPLGRRIAKE---------------DDFGETRFVWEGMRLLQESRGA 1245 Query: 120 TRIQTIYQPGSFTPLIRVET-------------------ATGELAKTQRRSLADTLQQSG 160 +Y+P S+ PL R++ G+ A + RS+ T Sbjct: 1246 HNSTYLYEPSSYRPLARIDGTGPLEPEHPVAVLALAGEDPRGDPAAGKVRSIPVT--NGD 1303 Query: 161 GEDGGSVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARK 220 D V PV E E L + G Q Q+ TP+ + Sbjct: 1304 ASDARHAVAGPVGATARYLAEVEALERGAGPDEPGQSTGRGGQARQTQSAS----TPSAR 1359 Query: 221 IHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEE---------------------- 258 I+ +H GLP + G W A+Y WGN + EE Sbjct: 1360 IYYFHLQPSGLPEEMSDRNGHLVWRAQYRLWGNAVAEEWQAFDATGRPVNAPMAETGIRA 1419 Query: 259 --NPHQLQQLIRLPGQQYDEESGLYYNRHRYYDPLQGRYITQDPIGLKGGWNFYQYPLNP 316 + Q +R+ GQ D E+GL+YN RYYDP G + T DPIGL GG N + Y NP Sbjct: 1420 QVSASPAPQNLRMQGQYLDRETGLHYNTFRYYDPDLGAFTTPDPIGLAGGLNLHGYAANP 1479 Query: 317 VQYIDSMGLASKYGHLNNGGYGARPNKPPTPDPSKLPDIAKQLRLPYPIDQASSAPNVFK 376 + +ID G A P+K+ A++ R+ +D A NV + Sbjct: 1480 LSWIDPWGWACI--------------------PNKVAGTAREARVGAKLDGKFGASNVLR 1519 Score = 58.3 bits (139), Expect = 6e-07, Method: Composition-based stats. Identities = 55/285 (19%), Positives = 89/285 (31%), Gaps = 54/285 (18%) Query: 5 NRIARDAHYLYRYDRHGRLTEKTDLIPEGV------------IRTDDERTHRYHYDSQHR 52 NR+ YRYD HG+L V + +++ +R+ YD+ +R Sbjct: 770 NRLT-----HYRYDIHGKLLALQRPDGSTVHLGYDAAHRLASLVSENGANYRFAYDTANR 824 Query: 53 LVHYTRTQYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQ---VTWYGWDG 109 LV R + + +D LGR V R E D+ G P T DG Sbjct: 825 LVQEQRPDGS----RHTFSHDSLGRVVELREDPGEDDVVGQAIRGHAPAAPIRTTCERDG 880 Query: 110 D---------RLTTIQNDRTRIQTIYQPGSFTPLIRVETATG-----ELAKTQRRSLADT 155 +T + + I+ + L+R ET +L Sbjct: 881 IGRLIAKRVQAMTGAPSSQDTIEQRFAYDKMNRLVRAETLDAAGQSPAQVAEFGYTLLGD 940 Query: 156 LQQSGGED---GGSVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMD 212 L Q ED G V + +RL +E+ R+ E G + + + Sbjct: 941 LAQEAAEDVVSGTRSVMRHTCDPLGNRLATELPDGRLLRELH---YGSGHVHQISLDGVV 997 Query: 213 PVYTPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNE 257 +H ++ T+G YD G + Sbjct: 998 VADIERDDLH----------REVLRTQGRWASRWAYDPLGRQRAQ 1032 Score = 55.2 bits (131), Expect = 6e-06, Method: Composition-based stats. Identities = 45/254 (17%), Positives = 72/254 (28%), Gaps = 42/254 (16%) Query: 18 DRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAE--PLVESRYLYDPL 75 D GRL K G + D R+ YD +RLV A P + + Y L Sbjct: 879 DGIGRLIAKRVQAMTGAPSSQDTIEQRFAYDKMNRLVRAETLDAAGQSPAQVAEFGYTLL 938 Query: 76 GRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQPGSFTPLI 135 G + +S +R G+RL T D ++ ++ Sbjct: 939 G-------DLAQEAAEDVVSGTRSVMRHTCDPLGNRLATELPDGRLLRELHYGSGHVH-- 989 Query: 136 RVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSEESRR 195 ++ +A +R L + ++ G + P+ Q + Sbjct: 990 QISLDGVVVADIERDDLHREVLRTQGRWASRWAYDPLGRQR-----------------AQ 1032 Query: 196 WLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLL 255 W S L V Q P A P L +YD G L+ Sbjct: 1033 WTQSASLRVGGNWAQQMPDAANASG-----------PGMLTD---GLRKQWDYDAAGELV 1078 Query: 256 NEENPHQLQQLIRL 269 + + R Sbjct: 1079 RTRHSRNGETQYRY 1092 Score = 52.9 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 50/282 (17%), Positives = 74/282 (26%), Gaps = 40/282 (14%) Query: 15 YRYDRHGRLTEKTDLIPEGVIR------------TDDERTHRYHYDS---QHRLVHYTRT 59 YRYD G+L + D + V R RY +D Q R+V + Sbjct: 450 YRYDTRGQLAQVIDRLGRCVRRFTWEGATLVAQTFASGLVARYRWDGPAPQGRVVQHWLE 509 Query: 60 QYAE--PLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQN 117 A P + YD G R R R +V + D D+ T Sbjct: 510 DAAPGMPATAWTFEYDLPGERPGDRRTR---------VTDHLGRVQLFDHDADQNVTRIE 560 Query: 118 DRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPP------ 171 D + L+ A G T L + G + Sbjct: 561 DPLGQVQRMEWNDLWQLLAWTRADGSRF-TFTYDRLGNLNGATDPLGQTARLDWHERLQR 619 Query: 172 --VLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHR 229 + DR + T + + D V +H D R Sbjct: 620 VRAATAVDGTRWHYTYDDRGNRTEVLGPPLKPGTPPHIPSDGDEVRWRESTLH----DPR 675 Query: 230 GLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRLPG 271 GLP+ + G +DE L+ + G Sbjct: 676 GLPVVTIDANGG-RQQWTWDERALLVRHTDCSGKTTRFEYDG 716 Score = 48.3 bits (113), Expect = 7e-04, Method: Composition-based stats. Identities = 40/267 (14%), Positives = 73/267 (27%), Gaps = 39/267 (14%) Query: 8 ARDAHYLYRYDRHGRLTEKTDLIPEGVI-------------RTDDERTHRYHYDSQHRLV 54 A + + + YDR G L TD + + D Y YD + Sbjct: 583 ADGSRFTFTYDRLGNLNGATDPLGQTARLDWHERLQRVRAATAVDGTRWHYTYDDRGNRT 642 Query: 55 HY--------TRTQYAEPLVESRYL----YDPLGRRV-------AKRVWRRERDLTGWMS 95 T E R+ +DP G V ++ W + Sbjct: 643 EVLGPPLKPGTPPHIPSDGDEVRWRESTLHDPRGLPVVTIDANGGRQQWTWDERALLVRH 702 Query: 96 LSRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADT 155 + T + +DG+ + D T Y + L+ V A G + Sbjct: 703 TDCSGKTTRFEYDGNGFLSKHIDALGQITHYVHDALGRLLSVTRADGTAERYTYDGADQL 762 Query: 156 LQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSEESRRWLASCG-------LTVEQMQ 208 + + + + ++L + + ++ LAS Sbjct: 763 VSAGDSSNRLTHYRYDIHGKLLALQRPDGSTVHLGYDAAHRLASLVSENGANYRFAYDTA 822 Query: 209 NQMDPVYTPARKIHLYHCDHRGLPLAL 235 N++ P H + D G + L Sbjct: 823 NRLVQEQRPDGSRHTFSHDSLGRVVEL 849 Score = 45.9 bits (107), Expect = 0.003, Method: Composition-based stats. Identities = 45/264 (17%), Positives = 72/264 (27%), Gaps = 31/264 (11%) Query: 18 DRHGRLTEKTDLIPEGVIR-----TDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYLY 72 D +G + +GV+R RY RLV T Y Y Sbjct: 394 DFNGNTID-FHRDADGVVRHVTDSAGHRLALRYAQAGGLRLVRVDLTAGGPAGTLVEYRY 452 Query: 73 DPLGR------RVAKRVWRRERDLTGWMSLSRKPQ-VTWYGWDGDRLTTIQNDRTRIQTI 125 D G+ R+ + V R + ++ + V Y WDG Sbjct: 453 DTRGQLAQVIDRLGRCVRRFTWEGATLVAQTFASGLVARYRWDGP--APQGRVVQHWLED 510 Query: 126 YQPG------SFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPP---VLVQM 176 PG +F + E + L + + + P V Sbjct: 511 AAPGMPATAWTFEYDLPGERPGDRRTRVTDHLGRVQLFDHDADQNVTRIEDPLGQVQRME 570 Query: 177 LDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALV 236 + L + R + + + DP+ AR + A Sbjct: 571 WNDLWQLLAWTRADGSRFTFTYD---RLGNLNGATDPLGQTARLDWH---ERLQRVRAAT 624 Query: 237 STEGATEWCAEYDEWGNLLNEENP 260 + +G T W YD+ GN P Sbjct: 625 AVDG-TRWHYTYDDRGNRTEVLGP 647 >UniRef50_Q7NY44 Probable Rhs-family protein n=2 Tax=Chromobacterium violaceum RepID=Q7NY44_CHRVO Length = 1513 Score = 257 bits (655), Expect = 1e-66, Method: Composition-based stats. Identities = 96/329 (29%), Positives = 129/329 (39%), Gaps = 78/329 (23%) Query: 4 DNRIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAE 63 N +++ A YRYD G L EK + R +DS +RL Sbjct: 1141 GNLLSQYAGRHYRYDSRGNLVEK----------RVNGSLTRLEWDSHNRLSRLIAPDG-- 1188 Query: 64 PLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQ 123 + Y YDPLGRR+AK + + T YGWDGD L D + Sbjct: 1189 --QRTDYHYDPLGRRIAKI---------------SQGEATLYGWDGDVLAFETRDEAAVH 1231 Query: 124 TIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESE 183 +++P SF PL +V T K S Sbjct: 1232 YLFEPDSFVPLAQVHTDAIRGVKVPAWSQHHPYDPDKDP--------------------- 1270 Query: 184 ILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATE 243 Q P + ++ YH DH G P AL GA Sbjct: 1271 ------------------------LRQPAPEPEAPKAVYYYHTDHLGTPQALTDEHGALA 1306 Query: 244 WCAEYDEWGN----LLNEENPHQLQQLIRLPGQQYDEESGLYYNRHRYYDPLQGRYITQD 299 +Y WG + + ++ R GQ +D+ESGL+YNRHRYYDP GR+I++D Sbjct: 1307 LEMDYQAWGQAREVIADAAGKAGIRNPFRFQGQYHDDESGLHYNRHRYYDPEIGRFISRD 1366 Query: 300 PIGLKGGWNFYQYPLNPVQYIDSMGLASK 328 PIGLKGG N Y Y LNP+ ++D +GL K Sbjct: 1367 PIGLKGGINIYGYALNPIVWMDPLGLTGK 1395 Score = 67.9 bits (164), Expect = 7e-10, Method: Composition-based stats. Identities = 62/289 (21%), Positives = 96/289 (33%), Gaps = 53/289 (18%) Query: 6 RIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPL 65 ++ D YRYDR GRL E++ + + YD RL Q Sbjct: 912 QVEGDVATDYRYDRAGRLIERSAPNSK----------ESFGYDPAGRL-----FQAKNRY 956 Query: 66 VESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTI 125 R++YDP+G V + + + Y G+R+ TI+ D R+ + Sbjct: 957 ASLRWVYDPVGNVVEEHHGYHVAGVKETYRWQHE-----YDKLGNRIATIRPDGHRVDVL 1011 Query: 126 YQPGS-------FTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLD 178 GS F +L + +R L + LQQ+ D Sbjct: 1012 -NYGSGHVHGLLFGQRDIFNLERDKLHRETQRVLGNALQQTLAYDKA------------G 1058 Query: 179 RLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVST 238 RL S+ L + + G V N+ + Y D G L + Sbjct: 1059 RLSSQRLMGATQWSRQYQYDAAGQLVGIADNRHGQLS--------YRYDPVGRLLEAATP 1110 Query: 239 EGATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEESGLYYNRHRY 287 +G +D GNLL+ Q L G + +G +Y RY Sbjct: 1111 KG--VESFRFDPAGNLLDNAPAADGHQDYSLLGNLLSQYAGRHY---RY 1154 Score = 58.7 bits (140), Expect = 5e-07, Method: Composition-based stats. Identities = 45/244 (18%), Positives = 64/244 (26%), Gaps = 41/244 (16%) Query: 9 RDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVES 68 +D RL + TD + G Y YD RL T Sbjct: 811 DGQATQLEHDAEARLLKITDPLGRG---------THYEYDKAGRLQKRTDANGHS----L 857 Query: 69 RYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQN-DRTRIQTIYQ 127 Y YD LGR A R + DG RLT D + + +Y Sbjct: 858 GYQYDKLGRLTALRNENHRYYRFDYD-------------DGGRLTAETGFDGSATRYVYD 904 Query: 128 PGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILAD 187 L + G++A R A L + P + Sbjct: 905 NA--GRLAQ--QVEGDVATDYRYDRAGRLIERSA--------PNSKESFGYDPAGRLFQA 952 Query: 188 RVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYH-CDHRGLPLALVSTEGATEWCA 246 + S RW+ V + + V H D G +A + +G Sbjct: 953 KNRYASLRWVYDPVGNVVEEHHGYH-VAGVKETYRWQHEYDKLGNRIATIRPDGHRVDVL 1011 Query: 247 EYDE 250 Y Sbjct: 1012 NYGS 1015 Score = 56.0 bits (133), Expect = 3e-06, Method: Composition-based stats. Identities = 61/332 (18%), Positives = 99/332 (29%), Gaps = 63/332 (18%) Query: 8 ARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVE 67 A + + YD L E D + E +R YD + +L+ T Sbjct: 684 ADGSEVHFVYDEQDNLVEIIDPMGEKWLR---------AYDDKGQLIEET---------- 724 Query: 68 SRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQ 127 DPLG + K + + + Y DG + + Q Y Sbjct: 725 -----DPLGHKT-KYAYNEQGLPVAITDAKGGAKKIAYRPDGLLESYTDCSGSATQWQYD 778 Query: 128 PGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILAD 187 PL+ V+ A G + Q + TLQ DG + L ++ D Sbjct: 779 ERG-RPLLIVD-AMGNATRYQ-YAANGTLQAIVQPDGQATQLEHDAEARLLKI-----TD 830 Query: 188 RVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWCAE 247 + + G ++ + Y D G AL + + + Sbjct: 831 PLGRGTHYEYDKAGRLQKRTDANGHSLG--------YQYDKLGRLTALRNEN-HRYYRFD 881 Query: 248 YDEWGNLLNEENPHQLQQLIRL--PGQQYDEESGLYYNRHRYYDPLQGRYITQ------- 298 YD+ G L E G+ + G +RY GR I + Sbjct: 882 YDDGGRLTAETGFDGSATRYVYDNAGRLAQQVEGDVATDYRYD--RAGRLIERSAPNSKE 939 Query: 299 ----DPIG-LKGGWNFYQYPLNPVQYI-DSMG 324 DP G L N Y ++++ D +G Sbjct: 940 SFGYDPAGRLFQAKNRYA----SLRWVYDPVG 967 Score = 45.2 bits (105), Expect = 0.005, Method: Composition-based stats. Identities = 38/259 (14%), Positives = 72/259 (27%), Gaps = 31/259 (11%) Query: 17 YDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRL---VHYTRTQYAEPLVESRYLYD 73 YD+ GR+ PE + + Y Y +L + E Y Y Sbjct: 508 YDKAGRIVRIEQHDPETGLAM--RKLAEYRYTDIPQLDGDAGDLLSATDENGQSWSYQY- 564 Query: 74 PLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQPGSFTP 133 + R + T WDG I+ GS Sbjct: 565 --------------QHHLITRYTDRTGRGTTLEWDG-----SHAKARAIREYADDGSLDI 605 Query: 134 LIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSEES 193 + + T VFP + L+ ++ L + ++ Sbjct: 606 RLAWDARIDLTYVTDAYGRTTEYYFDEKGYHYRTVFPDKSEEWLNYDANKRLIIHIHPDA 665 Query: 194 RRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGN 253 + + + N + ++H + D + + ++ G +W YD+ G Sbjct: 666 TQ----ENYSYDDRGNLVLHERADGSEVHFVY-DEQDNLVEIIDPMGE-KWLRAYDDKGQ 719 Query: 254 LLNEENPHQLQQLIRLPGQ 272 L+ E +P + Q Sbjct: 720 LIEETDPLGHKTKYAYNEQ 738 >UniRef50_Q1LDW7 YD repeat n=2 Tax=Burkholderiaceae RepID=Q1LDW7_RALME Length = 1626 Score = 253 bits (647), Expect = 8e-66, Method: Composition-based stats. Identities = 97/352 (27%), Positives = 138/352 (39%), Gaps = 60/352 (17%) Query: 4 DNRIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTR----- 58 N + + Y +D +G L +T+ + T Y YD+ +RL R Sbjct: 1190 GNVLRELSRTRYAHDAYGNLVRRTE---------PNGVTWLYQYDAANRLERADRYATPP 1240 Query: 59 -------------------TQYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRK 99 EP ++ R+LYD GRR K V R + Sbjct: 1241 PAEALKRIERTPDGVLHAFPARVEPDMQVRFLYDAFGRRTLKAVERAG-----------R 1289 Query: 100 PQVTWYGWDGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQS 159 + T++ WDGD L + + P + P+ + + TL QS Sbjct: 1290 LERTFFTWDGDVLLMEERFLQAKPQAFTPHEYQPIPVIREHPEDAHSVPVAQRQHTLAQS 1349 Query: 160 GGEDGGS-VVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPA 218 G S + P L RL+ ++ E + + G V+ Sbjct: 1350 HQWQGASLYLHEPDSFVPLARLDETLV-----EPAFMATGTDGRYVQVPAKSRHA----- 1399 Query: 219 RKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNL---LNEENPHQLQQLIRLPGQQYD 275 Y DH G P LV G W A Y WG L +P + IR PGQ +D Sbjct: 1400 --TLFYLNDHLGTPQELVDESGKVVWLARYKAWGGLKTPRKSTDPTETTNAIRFPGQYHD 1457 Query: 276 EESGLYYNRHRYYDPLQGRYITQDPIGLKGGWNFYQYPLNPVQYIDSMGLAS 327 E+GL+YNRHRYYDP GR+I++DP+GL GG N Y Y NPV ++D +GL Sbjct: 1458 VETGLHYNRHRYYDPGSGRFISKDPVGLAGGINVYTYAPNPVGWVDPLGLRC 1509 Score = 72.5 bits (176), Expect = 3e-11, Method: Composition-based stats. Identities = 48/247 (19%), Positives = 92/247 (37%), Gaps = 39/247 (15%) Query: 12 HYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYL 71 Y YD +G L ++ D + + Y +D+ +L+ T + E R+ Sbjct: 751 ETRYSYDANGFLLQRIDA---------EGHSTGYRHDASGQLLTRTHPDKS----EERFT 797 Query: 72 YDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQPGSF 131 YD G A QVT Y ++ T++ D + Y Sbjct: 798 YDHEGNLTA--------------YTDAAGQVTEYSYNARHQPTLRRDAAGRELWYFYDKQ 843 Query: 132 TPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSE 191 L R++ GE + ++ ++Q+G +D +++ +E E+ D + Sbjct: 844 WRLARLQNEAGEATRFTYDAVGQLVKQTGFDDRTVQYAYDAAGRLVGTVEGEMRTDYERD 903 Query: 192 ESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEW 251 R L + E +++ +D +H D +G + +T G + YD+ Sbjct: 904 PLGR-LTRRSVRAEGLRSSVDE---------HFHYDAQG--RLVTATSGVSTVHLHYDDA 951 Query: 252 GNLLNEE 258 GNL+ E+ Sbjct: 952 GNLVAEQ 958 Score = 62.5 bits (150), Expect = 3e-08, Method: Composition-based stats. Identities = 50/285 (17%), Positives = 78/285 (27%), Gaps = 33/285 (11%) Query: 4 DNRIARDAH-----YLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTR 58 NRI H + +D H + T+ + + R+ YD Q R T Sbjct: 612 HNRIVMVEHPDGSSERFEWDDHNNVVGVTNA---------EGQVQRFAYDEQGRATAVTD 662 Query: 59 TQYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSR-------KPQVTWYGWDGDR 111 E YD G V E T + L ++T Y W G Sbjct: 663 ALGNTTRTE----YDAAGLPVKVTAPTGEVTQTAYDELGHPVSVTDPAGRMTQYAWSGAG 718 Query: 112 LTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPP 171 L D + L V+ +G + + LQ+ E + Sbjct: 719 LLLALTDPKGGVQTFTYDHGGRLTCVQDCSGHETRYSYDANGFLLQRIDAEGHSTGYRHD 778 Query: 172 VLVQML-----DRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYT--PARKIHLY 224 Q+L D+ E D + A+ +T + P A + Y Sbjct: 779 ASGQLLTRTHPDKSEERFTYDHEGNLTAYTDAAGQVTEYSYNARHQPTLRRDAAGRELWY 838 Query: 225 HCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRL 269 D + L + G YD G L+ + Sbjct: 839 FYDKQWRLARLQNEAGEAT-RFTYDAVGQLVKQTGFDDRTVQYAY 882 Score = 56.7 bits (135), Expect = 2e-06, Method: Composition-based stats. Identities = 54/291 (18%), Positives = 85/291 (29%), Gaps = 57/291 (19%) Query: 2 WPDNRIARDAH--YLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRT 59 W R+ +A + YD G+L ++T D+RT +Y YD+ RLV Sbjct: 844 WRLARLQNEAGEATRFTYDAVGQLVKQTGF---------DDRTVQYAYDAAGRLVGTV-- 892 Query: 60 QYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDR 119 E + + Y DPLGR + V S + Y G RL T + Sbjct: 893 ---EGEMRTDYERDPLGRLTRRSVRAEGLR-------SSVDEHFHYDAQG-RLVTATSGV 941 Query: 120 TRIQTIYQPGSF-------------TPLIRVETATGELAKTQRRSLADTLQQSGGEDGGS 166 + + Y + L R +L +T G Sbjct: 942 STVHLHYDDAGNLVAEQQRYGSAGSGYVTVSRHEYDALGHRTRTTLPNTRTVDWLRYGSG 1001 Query: 167 VVFPPVL-VQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMD------------- 212 + L Q L +E + L V+ + R W + V +++ Sbjct: 1002 HLHGVQLDGQALLDVERDGLHREVARQHRGWRQTRAYDVNGRLDRIAVHAGTGEGKGNID 1061 Query: 213 --PVYTPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPH 261 + R+ H YD G LL +P Sbjct: 1062 VPGAWIAQRQFLYSQTGHLARIQ----DHARGVTDYTYDPVGRLLKAVSPD 1108 Score = 54.4 bits (129), Expect = 9e-06, Method: Composition-based stats. Identities = 36/230 (15%), Positives = 63/230 (27%), Gaps = 28/230 (12%) Query: 7 IARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTR---TQYAE 63 + + YD GRL T + T HYD LV + + + Sbjct: 918 LRSSVDEHFHYDAQGRLVTATSGVS----------TVHLHYDDAGNLVAEQQRYGSAGSG 967 Query: 64 PLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQ 123 + SR+ YD LG R +L V W + L +Q D + Sbjct: 968 YVTVSRHEYDALGHRTR-------------TTLPNTRTVDWLRYGSGHLHGVQLDGQALL 1014 Query: 124 TIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESE 183 + + G + R + D + G G + R Sbjct: 1015 DVERDGLHREVARQHRGWRQTRAYDVNGRLDRIAVHAGTGEGKGNIDVPGAWIAQRQFLY 1074 Query: 184 ILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPL 233 ++ T + + + V ++ + D G P+ Sbjct: 1075 SQTGHLARIQDHARGVTDYTYDPVGRLLKAVSPDLTEVFAF--DPAGNPV 1122 Score = 47.1 bits (110), Expect = 0.001, Method: Composition-based stats. Identities = 42/248 (16%), Positives = 68/248 (27%), Gaps = 26/248 (10%) Query: 17 YDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVES--RYLYDP 74 YD HG L T E T R Y + R+ R + + RY YD Sbjct: 463 YDNHGNLIGMTG---------GAEATIRLDY-VEGRVSAIHRVDLNGDIQLTLARYRYDR 512 Query: 75 LGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQPGSFTPL 134 G V ++ + +G+ + R + P Sbjct: 513 AGDLVRHENVLGHTRSFAYVQHLLTQYTDF---NGNAHHLEWSWPGRAHGLPAPAD---A 566 Query: 135 IRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSEESR 194 V T G+ A R + + + Q D ++ + S Sbjct: 567 KCVRTWIGKHADDPREDTRFEYHREHWYTKVTDADGGITYQRYDYHNRIVMVEHPDGSSE 626 Query: 195 RWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNL 254 R+ N + V ++ + D +G A+ G T EYD G Sbjct: 627 RFEWDD-------HNNVVGVTNAEGQVQRFAYDEQGRATAVTDALGNTT-RTEYDAAGLP 678 Query: 255 LNEENPHQ 262 + P Sbjct: 679 VKVTAPTG 686 Score = 42.5 bits (98), Expect = 0.035, Method: Composition-based stats. Identities = 42/258 (16%), Positives = 76/258 (29%), Gaps = 31/258 (12%) Query: 14 LYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYLYD 73 YRYDR G L +++ T + Y QH L YT +E + Sbjct: 507 RYRYDRAGDLVRHENVL---------GHTRSFAY-VQHLLTQYTDFNGNAHHLEWSWP-- 554 Query: 74 PLGRRVAKRVWRRERDLTGWMS--LSRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQPGSF 131 GR + + W+ + T + + + T D T + Sbjct: 555 --GRAHGLPAPADAKCVRTWIGKHADDPREDTRFEYHREHWYTKVTDADGGITYQRYDYH 612 Query: 132 TPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSE 191 ++ VE G + + + + + E + + + D + Sbjct: 613 NRIVMVEHPDGSSERFEWDDHNNVVGVTNAEGQVQRFAYDEQGR------ATAVTDALGN 666 Query: 192 ESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEW 251 +R + GL V V P ++ D G P+++ G + Sbjct: 667 TTRTEYDAAGLPV--------KVTAPTGEVTQTAYDELGHPVSVTDPAGRMT-QYAWSGA 717 Query: 252 GNLLNEENPHQLQQLIRL 269 G LL +P Q Sbjct: 718 GLLLALTDPKGGVQTFTY 735 >UniRef50_A9C0N8 YD repeat protein n=5 Tax=cellular organisms RepID=A9C0N8_DELAS Length = 1528 Score = 253 bits (645), Expect = 1e-65, Method: Composition-based stats. Identities = 122/358 (34%), Positives = 159/358 (44%), Gaps = 51/358 (14%) Query: 2 WPDNRIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQY 61 W DNRI ++RYD G + D + HYD H+L+ +Q Sbjct: 1038 WEDNRIGFTEDRVWRYDPCGNRIAQMQA---------DHSQQQLHYDGAHQLIAVRSSQI 1088 Query: 62 AEPLVE----SRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQ- 116 + SRY YD LGRR+ ++V + + T + +YGWDGDRL + Sbjct: 1089 QGNAEQLRHHSRYTYDALGRRLKQQVESADGNPT---------RTHYYGWDGDRLIHTER 1139 Query: 117 ---NDRTRI--QTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPP 171 D TR TIY+PGSFTPL+R+ T + + L + +G D P Sbjct: 1140 QQHGDDTRHIEHTIYEPGSFTPLVRLSTTASGDPQNEPHLLVQAIA-AGLPDQDDPNHRP 1198 Query: 172 VLVQMLDRLESEILADRVSEESR-RWLASCGLTVEQMQNQMDPVYTPAR----------- 219 L M L + + R GL + + AR Sbjct: 1199 ALALMQTMLSAMPRDMQQDAARHLRHTLEHGLPPGAQAMLGEQAESTARLLSGMQAKLQE 1258 Query: 220 ---------KIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRLP 270 IH YHCDH G P+AL G W A+ D WGN+L E NP + Q IRLP Sbjct: 1259 QEKEQHARIAIHHYHCDHLGTPMALTDQTGQVAWAAKLDPWGNVLQEYNPQGIHQAIRLP 1318 Query: 271 GQQYDEESGLYYNRHRYYDPLQGRYITQDPIGLKGGWNFYQYP-LNPVQYIDSMGLAS 327 GQ +D E+GLYYNRHRYYDP+ G Y+ QDPIGL GG N Y +P ID GL + Sbjct: 1319 GQHHDRETGLYYNRHRYYDPVVGSYVNQDPIGLAGGVNKILYSESSPTSKIDPTGLNT 1376 Score = 62.5 bits (150), Expect = 4e-08, Method: Composition-based stats. Identities = 58/296 (19%), Positives = 88/296 (29%), Gaps = 38/296 (12%) Query: 8 ARDAHYLYRYDRHGRLTEKTDLIPEGV------------IRTDDERTHRYHYD-SQHRLV 54 A + +L YD GRL +TD + V ++ D R+ + +D + RL+ Sbjct: 420 ADGSRWLQAYDSFGRLASRTDPLGRSVHLRRDGQGRLIGVQLPDGRSTQQEHDEATGRLL 479 Query: 55 HYTRTQYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQV------------ 102 T T A Y YD GR + + P Sbjct: 480 QSTDTAGATTG----YQYDAWGRLTQITQADGSTERYHYPDPQEAPLTCDSPRRIEDAQG 535 Query: 103 --TWYGWDGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSG 160 W D + T Y + LI V+ A G+ + Q R + S Sbjct: 536 GSKQLAWSDAGQLLSYTDCSGHSTHYHYDRWGALIEVDNALGQRQRHQ-RDGQGRIVASE 594 Query: 161 GEDGGSVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARK 220 +G + L R++ A S A + + T Sbjct: 595 LPNGQIERYHYDSAGHLTRIDP---AQPAGTSSETQTADPSIHLRYDLWGRLVQRTHGGL 651 Query: 221 IHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRL--PGQQY 274 + D G L LV+ G+ +D L+ EE Q Q R GQ Sbjct: 652 TLAFEYDSAGRLLRLVNENGSQ-SRFAWDALDRLVQEEGFDQRLQRYRWDAAGQLM 706 Score = 59.4 bits (142), Expect = 3e-07, Method: Composition-based stats. Identities = 59/322 (18%), Positives = 96/322 (29%), Gaps = 69/322 (21%) Query: 6 RIARDAHYLYRYDRHGRLTE-------KTDLIPEGVIRT-----DDERTHRYHYDSQHRL 53 R + YD GRL ++ + + R D+R RY +D+ +L Sbjct: 646 RTHGGLTLAFEYDSAGRLLRLVNENGSQSRFAWDALDRLVQEEGFDQRLQRYRWDAAGQL 705 Query: 54 VHYTRTQYAE-------------------------PLVESRYLYDPLGRRVAKRVWRRER 88 + T A+ P RY +D GR A VW+ Sbjct: 706 MEATDGNAAQQSSSHYRWDEGGRLAERQLPATPHAPAQTHRYEWDAAGRLTAASVWQHTG 765 Query: 89 DLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQ 148 + T ++ R+ ++ + D L I +Q +Y+PG G Sbjct: 766 ENTAENTIQRQSRIAL---ERDALGRIT---AEVQQLYRPGKDG-----NVGGGADQIEY 814 Query: 149 RRSLADTLQQSGGEDGGSVVFPPVLVQMLD--------RLESEILADRVSEESRRWLASC 200 +A TL + GG + + + +L L D + R + Sbjct: 815 EHRIAHTLDRLGGRQHSQLQGLGEIAWLTYGSGHVHGLQLNGASLIDFERDNLHREVRRS 874 Query: 201 GLTVEQMQNQMDPVYTPARKIHLYHCDHRGLP--LAL--VSTE-----GATE-WCAEYDE 250 + P+ + L G AL + G YD Sbjct: 875 LHPPTPAADAHHPLQVQRQWDSLGRLTALGTTGLQALQPTDAQAHALIGQILGRRYHYDS 934 Query: 251 WGNLLNEE---NPHQLQQLIRL 269 G L+ E P Q QL+R Sbjct: 935 LGQLVAIEQAGAPGQAAQLLRY 956 Score = 59.0 bits (141), Expect = 4e-07, Method: Composition-based stats. Identities = 47/268 (17%), Positives = 72/268 (26%), Gaps = 53/268 (19%) Query: 3 PDNRIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYA 62 I + Y YD G+L G + RY YDS RL T +Q Sbjct: 918 AHALIGQILGRRYHYDSLGQLVAIEQAGAPGQ----AAQLLRYGYDSAGRLRAATDSQ-- 971 Query: 63 EPLVESRYLYDPLGRRV-------------------AKRVWRRERDLTGWMSLSR----- 98 P +R+ DP G R+ A+ M L Sbjct: 972 HPQTTTRWQLDPAGNRLPAPGAPGATGQTNTQDNWAAQVHAHWRHTDFNLMGLGHLAGQR 1031 Query: 99 ---------------KPQVTWYGWDGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGE 143 + +V Y G+R+ +Q D ++ Q Y +R G Sbjct: 1032 QGPVQRWEDNRIGFTEDRVWRYDPCGNRIAQMQADHSQQQLHYDGAHQLIAVRSSQIQGN 1091 Query: 144 LAKTQRRS------LADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSEESR--R 195 + + S L L+Q G+ DRL + Sbjct: 1092 AEQLRHHSRYTYDALGRRLKQQVESADGNPTRTHYYGWDGDRLIHTERQQHGDDTRHIEH 1151 Query: 196 WLASCGLTVEQMQNQMDPVYTPARKIHL 223 + G ++ P + HL Sbjct: 1152 TIYEPGSFTPLVRLSTTASGDPQNEPHL 1179 Score = 55.2 bits (131), Expect = 5e-06, Method: Composition-based stats. Identities = 39/242 (16%), Positives = 72/242 (29%), Gaps = 33/242 (13%) Query: 12 HYLYRYDRHGRLTE-------KTDLIPEGVIRT-----DDERTHRYHYDSQHRLVHYTRT 59 Y YDR G L E + +G R + + RYHYDS L Sbjct: 558 STHYHYDRWGALIEVDNALGQRQRHQRDGQGRIVASELPNGQIERYHYDSAGHLTRIDPA 617 Query: 60 QYAEPLVES-------RYLYDPLGRRVAKRV------WRRERDLTGWMSLSRKPQVTWYG 106 Q A E+ YD GR V + + + ++ + + Sbjct: 618 QPAGTSSETQTADPSIHLRYDLWGRLVQRTHGGLTLAFEYDSAGRLLRLVNENGSQSRFA 677 Query: 107 WDG-DRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGG 165 WD DRL + R+Q Y+ + L+ T ++ D + Sbjct: 678 WDALDRLVQEEGFDQRLQ-RYRWDAAGQLMEA-TDGNAAQQSSSHYRWDEGGRLAERQLP 735 Query: 166 SVVFPPVLVQML-----DRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARK 220 + P RL + + E + + ++ + + ++ Sbjct: 736 ATPHAPAQTHRYEWDAAGRLTAASVWQHTGENTAENTIQRQSRIALERDALGRITAEVQQ 795 Query: 221 IH 222 ++ Sbjct: 796 LY 797 Score = 54.4 bits (129), Expect = 8e-06, Method: Composition-based stats. Identities = 47/244 (19%), Positives = 76/244 (31%), Gaps = 45/244 (18%) Query: 12 HYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYL 71 RYD GRL ++T T + YDS RL+ + +SR+ Sbjct: 632 SIHLRYDLWGRLVQRTH----------GGLTLAFEYDSAGRLLRLVNENGS----QSRFA 677 Query: 72 YDPLGRRVAKRVWRRERDLTGWMSLSRKPQVT----------WYGWD-GDRLTTIQNDRT 120 +D L R V + + + W + + + T Y WD G RL Q Sbjct: 678 WDALDRLVQEEGFDQRLQRYRWDAAGQLMEATDGNAAQQSSSHYRWDEGGRLAERQLPA- 736 Query: 121 RIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRL 180 TP +T E R + A Q +G + + + + Sbjct: 737 -----------TPHAPAQTHRYEWDAAGRLTAASVWQHTGENTAENTIQRQSRIALERDA 785 Query: 181 ESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEG 240 I A+ + G +Q++ + +T R H +GL G Sbjct: 786 LGRITAEVQQLYRPGKDGNVGGGADQIEYEHRIAHTLDRLGGRQHSQLQGL--------G 837 Query: 241 ATEW 244 W Sbjct: 838 EIAW 841 Score = 53.7 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 53/283 (18%), Positives = 89/283 (31%), Gaps = 28/283 (9%) Query: 4 DNRIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAE 63 D A+ + YR+D GRL E+ +THRY +D+ RL + Q+ Sbjct: 710 DGNAAQQSSSHYRWDEGGRLAER----QLPATPHAPAQTHRYEWDAAGRLTAASVWQHTG 765 Query: 64 P-------LVESRYLY--DPLGRRVA--KRVWRRERDLTGWMSLSRKPQVTWYGWDGDRL 112 +SR D LGR A ++++R +D + DRL Sbjct: 766 ENTAENTIQRQSRIALERDALGRITAEVQQLYRPGKDGNVGGGADQIEYEHRIAHTLDRL 825 Query: 113 TTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPV 172 Q+ + + ++ + + SL D + + + + PP Sbjct: 826 GGRQHSQLQGLGEIAWLTYG------SGHVHGLQLNGASLIDFERDNLHREVRRSLHPPT 879 Query: 173 LVQMLDR-LESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGL 231 L+ + D + + L + GL Q + YH D G Sbjct: 880 PAADAHHPLQVQRQWDSLGRLTA--LGTTGLQALQPTDAQAHALIGQILGRRYHYDSLGQ 937 Query: 232 PLAL--VSTEGATEW--CAEYDEWGNLLNEENPHQLQQLIRLP 270 +A+ G YD G L + Q R Sbjct: 938 LVAIEQAGAPGQAAQLLRYGYDSAGRLRAATDSQHPQTTTRWQ 980 Score = 49.0 bits (115), Expect = 4e-04, Method: Composition-based stats. Identities = 54/305 (17%), Positives = 92/305 (30%), Gaps = 62/305 (20%) Query: 5 NRIARDAHYL-----YRYDRHGRLTEKTDLIP-----------------EGVIRTDD--E 40 R+ + Y+YD GRLT+ T + R +D Sbjct: 476 GRLLQSTDTAGATTGYQYDAWGRLTQITQADGSTERYHYPDPQEAPLTCDSPRRIEDAQG 535 Query: 41 RTHRYHYDSQHRLVHYTRTQYAEPLVESRYLYDPLGRRVA-------KRVWRRERDLTGW 93 + + + +L+ YT + Y YD G + ++ +R+ Sbjct: 536 GSKQLAWSDAGQLLSYTDCSGHS----THYHYDRWGALIEVDNALGQRQRHQRDGQGRIV 591 Query: 94 MSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLA 153 S Q+ Y +D T + T + + P I + R L Sbjct: 592 ASELPNGQIERYHYDSAGHLTRIDPAQPAGTSSETQTADPSIHL-----------RYDLW 640 Query: 154 DTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDP 213 L Q G ++ F L RL +E S+ W A L E+ +Q Sbjct: 641 GRLVQ-RTHGGLTLAFEYDSAGRLLRLVNE----NGSQSRFAWDALDRLVQEEGFDQ--- 692 Query: 214 VYTPARKIHLYHCDHRGLPLALVSTEGATEWCAEY--DEWGNLLNEENPHQLQQLIRLPG 271 ++ Y D G + A + + Y DE G L + P + Sbjct: 693 ------RLQRYRWDAAGQLMEATDGNAAQQSSSHYRWDEGGRLAERQLPATPHAPAQTHR 746 Query: 272 QQYDE 276 ++D Sbjct: 747 YEWDA 751 Score = 46.3 bits (108), Expect = 0.003, Method: Composition-based stats. Identities = 50/294 (17%), Positives = 81/294 (27%), Gaps = 36/294 (12%) Query: 6 RIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYA--- 62 ++ + + D R ++ P + +DS RL T Sbjct: 853 QLNGASLIDFERDNLHREVRRSLHPPTPAADAHHPLQVQRQWDSLGRLTALGTTGLQALQ 912 Query: 63 ----------EPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWD-GDR 111 ++ RY YD LG+ VA + + + Q+ YG+D R Sbjct: 913 PTDAQAHALIGQILGRRYHYDSLGQLVA---------IEQAGAPGQAAQLLRYGYDSAGR 963 Query: 112 L---TTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVV 168 L T Q+ +T + P TQ A D + Sbjct: 964 LRAATDSQHPQTTTRWQLDPAGNRLPAPGAPGATGQTNTQDNWAAQVHAHWRHTDFNLMG 1023 Query: 169 FPPVLVQMLDRLESEILADRVSEESRRW-LASCGLTVEQMQ---NQMDPVYTPARKIHLY 224 + Q ++ E R W CG + QMQ +Q Y A ++ Sbjct: 1024 LGHLAGQRQGPVQRWEDNRIGFTEDRVWRYDPCGNRIAQMQADHSQQQLHYDGAHQLIAV 1083 Query: 225 HCDHR-GLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEE 277 G L YD G L ++ R +D + Sbjct: 1084 RSSQIQGNAEQL-----RHHSRYTYDALGRRLKQQVESADGNPTRTHYYGWDGD 1132 >UniRef50_Q39K64 Rhs family protein n=22 Tax=Burkholderia RepID=Q39K64_BURS3 Length = 1560 Score = 253 bits (645), Expect = 1e-65, Method: Composition-based stats. Identities = 98/349 (28%), Positives = 141/349 (40%), Gaps = 79/349 (22%) Query: 4 DNRIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAE 63 N + + A + YD G L + E RY +++ +R+ T + A Sbjct: 1173 GNLLKQYAGEHFAYDARGNLVHRRSPAGE----------QRYEWNAFNRMTAATVDEVAR 1222 Query: 64 PLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQ 123 ESRY YD LGRR+AK V + T +GWDGD L ++ Sbjct: 1223 R-SESRYYYDALGRRIAKEV---------------NGERTVFGWDGDTLAYESGEQGSTH 1266 Query: 124 TIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESE 183 +Y+ GSF P+++ +A+ + +T R D + Sbjct: 1267 YLYEAGSFVPMVQYASASVDGFETPSRRETDRYVPEDDP-------------------LQ 1307 Query: 184 ILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATE 243 L +RV + YHCD G P L EG Sbjct: 1308 RLPERVGDAHA---------------------------FYYHCDQIGTPQLLTDDEGDVV 1340 Query: 244 WCAEYDEWGNLLNEENPHQ------LQQLIRLPGQQYDEESGLYYNRHRYYDPLQGRYIT 297 W A Y WG + +R GQQ D+E+GL+YNRHRYYDP GR+++ Sbjct: 1341 WEASYKAWGEAREVIARASKVAGIVPRSSLRFQGQQVDDETGLHYNRHRYYDPRSGRFVS 1400 Query: 298 QDPIGLKGGWNFYQYPLNPVQYIDSMGLASKYGHLN-NGGYGARPNKPP 345 +DPIGL GG N YQY NPV+++D +GL+ G + + G KP Sbjct: 1401 KDPIGLAGGINVYQYAPNPVKWVDPLGLSKSEGGCSCSCGINPVTGKPR 1449 Score = 71.8 bits (174), Expect = 5e-11, Method: Composition-based stats. Identities = 72/376 (19%), Positives = 123/376 (32%), Gaps = 54/376 (14%) Query: 3 PDNRIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYA 62 P NR + Y YD GR+ +TD + ++ Y YD R+V T +A Sbjct: 841 PLNR-----NTRYGYDASGRINIRTDAL---------GQSLSYRYDRLGRIVGLTNQNHA 886 Query: 63 EPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRI 122 + YD GR + + + + + S + + ++ + R Sbjct: 887 N----YSFRYDVAGRMIEEIDFDGKATRYSYDEASSRLESVDEAGQVMTMSHDRGGRLNG 942 Query: 123 QTIYQPG---SFTPLIRVETATGELAKTQRRS--LADTLQQSGGEDGGSVVFPPVLVQML 177 +++ + S+ PL R+ A+ ++ QR + +++ D V Sbjct: 943 RSVGEEAERFSYDPLGRLIEASNRYSRVQRFFDPAGNLVREHHAYDLFGSSRSFVWHHRY 1002 Query: 178 DRLESEILADRVSEESRRWL-ASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALV 236 D + + I R + WL G M + + V + HR L Sbjct: 1003 DEIGNRIGTVRPDGHAVDWLTYGSGHVHGLMLDGKELVQIERDDL------HRETLRTLP 1056 Query: 237 STEGATEWCAEYDEWGNLLNEENPHQ------LQQLIRL--PGQQ---YDEESGLYYNRH 285 S + YD G L ++ R GQ D GL R Sbjct: 1057 S---KIDQHTAYDRAGRLAQRTVQRANAPAPLAERRYRYDAAGQLVQIEDNRRGLTDYR- 1112 Query: 286 RYYDPLQGRYITQDPIGLKGGWNFYQYPLNPVQY-IDSMGLASKYGHLNNGGYGARPNKP 344 YDP GR + IG G ++ +P ID + + + A + Sbjct: 1113 --YDP-VGRLLES--IGPAGKE---RFAFDPASNIIDPVRVEAPRTESRPSPVRATESTL 1164 Query: 345 PTPDPSKLPDIAKQLR 360 P P L ++ KQ Sbjct: 1165 PAEVPKVLGNLLKQYA 1180 Score = 59.0 bits (141), Expect = 4e-07, Method: Composition-based stats. Identities = 54/297 (18%), Positives = 80/297 (26%), Gaps = 48/297 (16%) Query: 7 IARDAHY-LYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPL 65 I RD YD G RTD YD + +LV T P Sbjct: 672 IHRDGTVEQMEYDVRGNFVR--------HQRTDGSVVEM-AYDQKDQLVRVTDP-LGHPW 721 Query: 66 VESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTI 125 + YD G VA + T Y +DG L T D Sbjct: 722 LRE---YDDAGNMVA--------------EVDPLGHKTEYAYDGRGLLTRIKDAKGGVKA 764 Query: 126 YQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEIL 185 + L +G+ ++ + + G + Q+++ + Sbjct: 765 LKYDDVGQLTGYTDCSGKTSQWAYDAQGRLSEAKDAAGGVTAYRYGANGQLIEVVSPAGR 824 Query: 186 ADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWC 245 + R L +DP+ R Y D G G + Sbjct: 825 EQLSYDAEGRLL-----------THIDPLNRNTR----YGYDASGRINIRTDALGQSL-S 868 Query: 246 AEYDEWGNLLNEENPHQLQQLIRL--PGQQYDEESGLYYNRHRY-YDPLQGRYITQD 299 YD G ++ N + R G+ EE RY YD R + D Sbjct: 869 YRYDRLGRIVGLTNQNHANYSFRYDVAGRMI-EEIDFDGKATRYSYDEASSRLESVD 924 Score = 55.6 bits (132), Expect = 4e-06, Method: Composition-based stats. Identities = 50/288 (17%), Positives = 81/288 (28%), Gaps = 57/288 (19%) Query: 4 DNRIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQ--- 60 + R + + YD GRL E ++ R R+ +D LV Sbjct: 941 NGRSVGEEAERFSYDPLGRLIEASNRY---------SRVQRF-FDPAGNLVREHHAYDLF 990 Query: 61 YAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDR- 119 + + YD +G R+ R + W++ V DG L I+ D Sbjct: 991 GSSRSFVWHHRYDEIGNRIG--TVRPDGHAVDWLTYG-SGHVHGLMLDGKELVQIERDDL 1047 Query: 120 ---------TRIQTIYQPGSFTPLIR--VETATGELAKTQRRSLADTLQQSGGEDGGSVV 168 ++I L + V+ A +RR D Q + Sbjct: 1048 HRETLRTLPSKIDQHTAYDRAGRLAQRTVQRANAPAPLAERRYRYDAAGQLVQIEDNRRG 1107 Query: 169 FPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDH 228 + RL ES + N +DPV A + + Sbjct: 1108 LTDYRYDPVGRLL----------ESIGPAGKERFAFDPASNIIDPVRVEAPR-----TES 1152 Query: 229 RGLPLALVSTE---------GATEWCA-----EYDEWGNLLNEENPHQ 262 R P+ + G YD GNL++ +P Sbjct: 1153 RPSPVRATESTLPAEVPKVLGNLLKQYAGEHFAYDARGNLVHRRSPAG 1200 Score = 54.8 bits (130), Expect = 7e-06, Method: Composition-based stats. Identities = 75/423 (17%), Positives = 115/423 (27%), Gaps = 81/423 (19%) Query: 4 DNRIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAE 63 IA +R+D GR+ T +G Y YD Q+ L+ T Sbjct: 514 HRLIASHVQVAFRHDVRGRIVGITHHDAQGEYV---GTLASYEYDDQNDLIGA--TDRYG 568 Query: 64 PLVESRYLY-------DPLGRRVAKRVWRRERDLTGWMSL-SRKPQVTWYGWDGD-RLTT 114 E RY + D GR V + W D R+ + Sbjct: 569 NRREYRYRHHLVTRYTDRTGRGVNLEWNGDGPKAKCFREYADDGSDEVRLAWHPDFRMVS 628 Query: 115 IQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLV 174 + + + Y S RV G R D L Q DG + Sbjct: 629 VTDALGNVTHHY-YDSKGYSFRVIHPDGSEEWMY-RDANDKLVQYIHRDGTVEQMEYDVR 686 Query: 175 ------QMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIH--LYHC 226 Q D E+ D+ + R + + + + V H Y Sbjct: 687 GNFVRHQRTDGSVVEMAYDQKDQLVRVTDPLGHPWLREYDDAGNMVAEVDPLGHKTEYAY 746 Query: 227 DHRGLPLALVSTEGATEW--------------------CAEYDEWGNLLNEENPHQLQQL 266 D RGL + +G + YD G L ++ Sbjct: 747 DGRGLLTRIKDAKGGVKALKYDDVGQLTGYTDCSGKTSQWAYDAQGRLSEAKDAAGGVTA 806 Query: 267 IRL--PGQQ-------------YDEESGLYYNRHRYYDPLQGRYITQ-DPIGLKGGWNFY 310 R GQ YD E GR +T DP+ Y Sbjct: 807 YRYGANGQLIEVVSPAGREQLSYDAE---------------GRLLTHIDPLNRN---TRY 848 Query: 311 QYPLNPVQYI--DSMGLASKYGHLNNGGYGARPNKPPTPDPSKLPDIAKQLRLPYPIDQA 368 Y + I D++G + Y + G N+ + S D+A ++ D Sbjct: 849 GYDASGRINIRTDALGQSLSYRYDRLGRIVGLTNQNH-ANYSFRYDVAGRMIEEIDFDGK 907 Query: 369 SSA 371 ++ Sbjct: 908 ATR 910 >UniRef50_Q0JZD5 RHS family protein n=9 Tax=Bacteria RepID=Q0JZD5_RALEH Length = 1585 Score = 252 bits (644), Expect = 2e-65, Method: Composition-based stats. Identities = 99/356 (27%), Positives = 139/356 (39%), Gaps = 92/356 (25%) Query: 4 DNRIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAE 63 DN + + A Y +D G L+ +R + R+ +D+ +RLV + Sbjct: 1180 DNLLKQYAGTHYEWDERGNLS----------LRVVNGVHERFAWDAFNRLVG-----WHN 1224 Query: 64 PLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQV-----------TWYGWDGDRL 112 P VE RY YD LGRR++K + + R+ + T YGWDGD+L Sbjct: 1225 PKVEVRYRYDALGRRLSKSSSANYFENQNDGEIYRRNERARLNQEYGCAFTLYGWDGDQL 1284 Query: 113 TTIQ----------------NDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTL 156 +Y+PGS PL + RR D L Sbjct: 1285 AWESRQEPEAGVGDHFRIIPGAERTTHYLYEPGSLVPLAQ----------AVRREAIDLL 1334 Query: 157 QQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYT 216 + E + P+ + + E LA Sbjct: 1335 PEPAWEGDYDLDDDPLWTREIAPQPFEALA------------------------------ 1364 Query: 217 PARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWG----NLLNEENPHQLQQLIRLPGQ 272 Y CDH G P L G W A+Y WG + N +Q +R GQ Sbjct: 1365 ------WYQCDHLGTPQELTDEAGELAWSAQYKAWGAAQEAISNAARKAGIQNPLRFQGQ 1418 Query: 273 QYDEESGLYYNRHRYYDPLQGRYITQDPIGLKGGWNFYQYPLNPVQYIDSMGLASK 328 YD E+GL+YNRHRYYDP GR++++DPIGL GG N QY NP+ ++D +GLA Sbjct: 1419 YYDHENGLHYNRHRYYDPGTGRFVSKDPIGLAGGLNLNQYAPNPISWVDPLGLACS 1474 Score = 55.6 bits (132), Expect = 4e-06, Method: Composition-based stats. Identities = 40/251 (15%), Positives = 80/251 (31%), Gaps = 19/251 (7%) Query: 14 LYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYLYD 73 + +D GRLT + + + R T + Y+ RL+ ++ +D Sbjct: 927 DFVFDAMGRLTRRRAGLIDADNRVPHVLTETFAYNGNGRLILAENAD-----SRLQWFHD 981 Query: 74 PLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQPGSFTP 133 G V R + Y R+ T++ D R+ + Sbjct: 982 AAGNVV-----REHQHYRCLKEPLVAVWRHEYDALNQRIATVRPDGHRVGVLTYGSGHVH 1036 Query: 134 LIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSEES 193 + ++ EL + +R +L + ++ G ++L++ S + + Sbjct: 1037 GVMLD--DRELVQFERDNLHRDIARTQGNRLAQSQVYDPAGRLLEQTLSHVEGAHAGQRM 1094 Query: 194 RRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGN 253 R Q+ + R Y D G L S G ++D GN Sbjct: 1095 LRREYQYD-----AAGQLSSIRDLRRGTLQYRYDPVGRLLEANSALG--VETFDFDPAGN 1147 Query: 254 LLNEENPHQLQ 264 LL++ + + Sbjct: 1148 LLHDPDTRVFK 1158 Score = 53.3 bits (126), Expect = 2e-05, Method: Composition-based stats. Identities = 52/281 (18%), Positives = 95/281 (33%), Gaps = 42/281 (14%) Query: 9 RDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVES 68 A ++YD GRL ++ D +T Y+YD L+ +T + + Sbjct: 879 NSASTEFQYDPVGRLLRESGF---------DGKTTEYNYDPASGLLDWT---VDSGQLMT 926 Query: 69 RYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGD-RLTTIQNDRTRIQTIYQ 127 +++D +GR + RR L + + ++G+ RL +N +R+Q + Sbjct: 927 DFVFDAMGR-----LTRRRAGLIDADNRVPHVLTETFAYNGNGRLILAENADSRLQWFHD 981 Query: 128 -PGSFTPLIRVETATGELAKTQRRSLADTLQQ------SGGEDGGSVVFPPVLVQ----- 175 G+ + E R D L Q G G + + V Sbjct: 982 AAGNVVREHQHYRCLKEPLVAVWRHEYDALNQRIATVRPDGHRVGVLTYGSGHVHGVMLD 1041 Query: 176 --MLDRLESEILADRVSEESRRWLAS------CGLTVEQMQNQMDPVYTPARKIHL-YHC 226 L + E + L ++ LA G +EQ + ++ + R + Y Sbjct: 1042 DRELVQFERDNLHRDIARTQGNRLAQSQVYDPAGRLLEQTLSHVEGAHAGQRMLRREYQY 1101 Query: 227 DHRGLPLALVS-TEGATEWCAEYDEWGNLLNEENPHQLQQL 266 D G ++ G YD G LL + ++ Sbjct: 1102 DAAGQLSSIRDLRRGTL--QYRYDPVGRLLEANSALGVETF 1140 Score = 47.9 bits (112), Expect = 0.001, Method: Composition-based stats. Identities = 52/315 (16%), Positives = 88/315 (27%), Gaps = 48/315 (15%) Query: 4 DNRIARDAHYLYRY--DRHGR-------------LTEKTDLIPEGVIR----------TD 38 D R+ D + Y D HG + D + E R Sbjct: 610 DTRLEWDENIRLTYVTDAHGNETWHYYDILGYTYRIQHPDGLSEWFFRDHAKNVVKHVHT 669 Query: 39 DERTHRYHYDSQHRLVHYTRTQYAEPLVESRYLYD-----PLGRRVAKRVWRRERDLTGW 93 D RY YD + LV + R + Y +D R +W R+ D+ G Sbjct: 670 DGAVDRYAYDERGNLVEHIRPDDS----VVHYAWDDKDQLIKIRDAEGGLWLRDYDIKGN 725 Query: 94 MSLSRKP--QVTWYGWDGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRS 151 ++ P T Y ++ L D + + L +G+ + + Sbjct: 726 LTEEIDPLGHKTAYAYNKSGLPVEITDAKGGKKQLAFTATGQLASYTDCSGKTSAWKYGE 785 Query: 152 LADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQM 211 + ++ + + + + + R L + + Sbjct: 786 RGELVRFTDAAGNATQYHYEAGQLASVTHPDQRVERFERDAEGRLLVHTDALHRRTAWRY 845 Query: 212 DPVY------TPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQ 265 + V A + Y D G L + A+ +YD G LL E Sbjct: 846 NEVGLIAERTDAAGQTLGYRWDRLGRLATLTNENSAST-EFQYDPVGRLLRESGFDGKTT 904 Query: 266 LIRLPGQQYDEESGL 280 YD SGL Sbjct: 905 EYN-----YDPASGL 914 Score = 44.0 bits (102), Expect = 0.012, Method: Composition-based stats. Identities = 48/268 (17%), Positives = 81/268 (30%), Gaps = 30/268 (11%) Query: 3 PDNRIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLV--HYTRTQ 60 DNR+ + Y+ +GRL + D R +H D+ +V H Sbjct: 946 ADNRVPHVLTETFAYNGNGRLILAENA---------DSRLQWFH-DAAGNVVREHQHYRC 995 Query: 61 YAEPLVE-SRYLYDPLGRRVAKRVWRRERDLTGWMSLSR-------KPQVTWYGWDGDR- 111 EPLV R+ YD L +R+A R ++ + D Sbjct: 996 LKEPLVAVWRHEYDALNQRIATVRPDGHRVGVLTYGSGHVHGVMLDDRELVQFERDNLHR 1055 Query: 112 -LTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFP 170 + Q +R +Y P L + + QR + + G+ Sbjct: 1056 DIARTQGNRLAQSQVYDPAG-RLLEQTLSHVEGAHAGQRMLRREYQYDAAGQLSSIRDLR 1114 Query: 171 PVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRG 230 +Q +L + + + + PAR +H +G Sbjct: 1115 RGTLQYRYDPVGRLLEANSALGVETFDFDPAGNLLHDPDTRVFKADPARGRPEFHSRLQG 1174 Query: 231 LPLALVST----EGATEWCAEYDEWGNL 254 P + + G E+DE GNL Sbjct: 1175 RPKLVDNLLKQYAGT---HYEWDERGNL 1199 >UniRef50_A1TR18 YD repeat protein n=8 Tax=Acidovorax RepID=A1TR18_ACIAC Length = 1654 Score = 252 bits (643), Expect = 2e-65, Method: Composition-based stats. Identities = 89/344 (25%), Positives = 135/344 (39%), Gaps = 59/344 (17%) Query: 4 DNRIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAE 63 DN + + YD RL EK R R+ +D + +LV T++ Sbjct: 1211 DNLVRVYEDKRFAYDGFARLREK---------RIGRHTVQRFEWDDEDQLVAVETTRHPG 1261 Query: 64 PLVESR----YLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDR 119 +R + YD LGRR+AK+ T + W+G RL + Sbjct: 1262 TAQATRQRVEFRYDALGRRIAKQ---------------DAFGRTEFIWEGMRLIEERRGS 1306 Query: 120 TRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDR 179 + +Y+PGS+ PL R++ A G+ + S + P L+ Sbjct: 1307 KVVSYVYEPGSYVPLARID-ADGQRLEGSGHGGLVGGAGSDAAGRATSANPGTGYASLNP 1365 Query: 180 LESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTE 239 + + + S Q + + ++ +H D GLP + Sbjct: 1366 MAAPGSSAAGQAASAS-----------AQTPAESRLRASAQVSYFHNDPSGLPEEVTDEA 1414 Query: 240 GATEWCAEYDEWGNLLNEE-------------------NPHQLQQLIRLPGQQYDEESGL 280 G W A + WG+ L E N L+Q +RL GQ D E+GL Sbjct: 1415 GEVRWRASWRTWGSALEERWEAVRIDGSAIPAVQQRHRNEDTLEQNLRLQGQYLDRETGL 1474 Query: 281 YYNRHRYYDPLQGRYITQDPIGLKGGWNFYQYPLNPVQYIDSMG 324 +YN RYYDP GR+I+ DPIGL GG N +Y NP+ +ID +G Sbjct: 1475 HYNTFRYYDPDVGRFISPDPIGLAGGLNLQRYAANPISWIDPLG 1518 Score = 62.5 bits (150), Expect = 4e-08, Method: Composition-based stats. Identities = 44/248 (17%), Positives = 70/248 (28%), Gaps = 21/248 (8%) Query: 18 DRHGRLTEK---TDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYLYDP 74 D GRLT + D T RY YD Q LV T +RY YD Sbjct: 601 DPLGRLTRTLWDSQWFEPLRTTGPDGATWRYEYDRQGLLVQETAPDGG----VTRYAYDA 656 Query: 75 LGRRV-------AKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQ 127 G+ V R + + T YGWDG D QT Sbjct: 657 QGQVVQIQDALGGARTLQWNERGLLVRHTDCSGRTTRYGWDGWGQLQSVTDALGQQTQGV 716 Query: 128 PGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILAD 187 + L + G + + ++ + + V Q+L R +++ Sbjct: 717 VDARGQLRSLRLPDGSSQGFEYDAGGRLVEHTDALSRATRYGHNVRGQLLWRRDAQGREI 776 Query: 188 RVS-EESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLAL-VSTEGATEWC 245 + + + R A + + D + G + L +G Sbjct: 777 GAAHDGAHRLSALATENGGVYRFRYDDADRMVEEER-----LEGTRVGLEYDADGHVVAV 831 Query: 246 AEYDEWGN 253 + G Sbjct: 832 VHHPARGE 839 Score = 49.4 bits (116), Expect = 3e-04, Method: Composition-based stats. Identities = 45/289 (15%), Positives = 82/289 (28%), Gaps = 39/289 (13%) Query: 14 LYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYLY- 72 +++DR LT T+ + T R ++ + L+ TR A + + Y Sbjct: 545 RWQWDRWHNLTAYTNAVGA---------TWRLAWNERRELLSCTRPSGA----TTTFQYD 591 Query: 73 ---------DPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQ 123 DPLGR R + + Y +D L + Sbjct: 592 DNGMQTGVVDPLGRLT--RTLWDSQWFEPLRTTGPDGATWRYEYDRQGLLVQETAPDGGV 649 Query: 124 TIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESE 183 T Y + +++++ A G A+T + + L + G + + L + Sbjct: 650 TRYAYDAQGQVVQIQDALGG-ARTLQWNERGLLVRHTDCSGRTTRYGWDGWGQLQSVTDA 708 Query: 184 ILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGL-PLALVSTEGAT 242 + R + Y ++ H D + G Sbjct: 709 LGQQTQGVVDAR--GQLRSLRLPDGSSQGFEYDAGGRLVE-HTDALSRATRYGHNVRGQL 765 Query: 243 EWCAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEESGLYYNRHRYYDPL 291 W D G + + + E+G Y R RY D Sbjct: 766 LWRR--DAQGREIGAAHDGAHRLSALAT------ENGGVY-RFRYDDAD 805 Score = 49.4 bits (116), Expect = 3e-04, Method: Composition-based stats. Identities = 38/246 (15%), Positives = 69/246 (28%), Gaps = 27/246 (10%) Query: 6 RIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRY------------HYDSQHRL 53 R+ + + YD GRL E TD + + R +D HRL Sbjct: 727 RLPDGSSQGFEYDAGGRLVEHTDALSRATRYGHNVRGQLLWRRDAQGREIGAAHDGAHRL 786 Query: 54 VHYTRTQYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDG-DRL 112 R+ YD R V + R + + V + G D Sbjct: 787 SALATENGG----VYRFRYDDADRMVEEERLEGTRVGLEYDADGHVVAVVHHPARGEDVF 842 Query: 113 TTIQNDRTRIQTIYQPGSFTPLI--RVETATGELAKTQRRSLADTLQQSGGEDGGSVVFP 170 ++ P R + L + + + ++ + + GG +V Sbjct: 843 HELETQAQEGTLREGPAGQNAQAPRRTDLQRDALGRLVEKRVGGSVLRYRYDAGGRLVEA 902 Query: 171 P-----VLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYH 225 Q + ++E + +R + G V ++ D + H Sbjct: 903 SRWRRQAGAQAESKADTEAETLELQHTTRFEYDALGRIV--AEHAQDAASGQVHTLRHEH 960 Query: 226 CDHRGL 231 D G Sbjct: 961 -DALGN 965 Score = 47.1 bits (110), Expect = 0.002, Method: Composition-based stats. Identities = 48/278 (17%), Positives = 76/278 (27%), Gaps = 36/278 (12%) Query: 18 DRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLV----------- 66 D GRL EK RY YD+ RLV +R + Sbjct: 874 DALGRLVEK----------RVGGSVLRYRYDAGGRLVEASRWRRQAGAQAESKADTEAET 923 Query: 67 -----ESRYLYDPLGRRVAKRVWRRERDLTGWMSLSR---KPQVTWYGWDGDRLTTIQND 118 +R+ YD LGR VA+ + + + Sbjct: 924 LELQHTTRFEYDALGRIVAEHAQDAASGQVHTLRHEHDALGNRTRTQLPAVNSRAGRAVL 983 Query: 119 RTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGED-----GGSVVFPPVL 173 R + ++ I + A + + SL Q+ G D V + Sbjct: 984 RRSLNYLHYGSGHLHQINLGLAEELAQEAPQESLPGETLQASGLDNVLPEPVREVHRLIA 1043 Query: 174 VQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPL 233 D L E+L + + +R L + G + A + + L Sbjct: 1044 DIERDALHREVLRTQGTLATRYALDALGRRTGSWTRSGLGLQDAAGEDWRAAWQQQVEAL 1103 Query: 234 ALVSTEGAT--EWCAEYDEWGNLLNEENPHQLQQLIRL 269 A A YD G L + H+ + R Sbjct: 1104 AQRGPSAAVGLLKQYRYDAVGELRESVHSHKGRTSWRY 1141 Score = 45.6 bits (106), Expect = 0.004, Method: Composition-based stats. Identities = 48/303 (15%), Positives = 72/303 (23%), Gaps = 69/303 (22%) Query: 16 RYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVE----SRYL 71 RYD RL D + R R Y + RLV A P + + Y Sbjct: 380 RYDGERRLAGIADHL---------GRLLRLDYQAGTRLVAAIHLVQAAPGEQLGLLATYR 430 Query: 72 YDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQPGSF 131 YD G L +R + +G + ++ + Sbjct: 431 YDAGG------------QLADVQDRTRATVRRFAYSEGLMVRQEDAAGFACHYAWEDAA- 477 Query: 132 TPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVF----------PPVLVQMLDRLE 181 E G R + + EDG S P Sbjct: 478 -QASGPERQDGARGPDGRHLRDRRVVRHWTEDGESYAIAYGVDGSFDGGPAGETGGWTRS 536 Query: 182 SEILADRVSEESRRWLASCGLTVE---------QMQNQMDPVYTPARKIHLYHCDHRGLP 232 ++ L + RW T + ++ P+ + D G+ Sbjct: 537 TDQLGREERWQWDRWHNLTAYTNAVGATWRLAWNERRELLSCTRPSGATTTFQYDDNGMQ 596 Query: 233 LALVSTEGATE---------------------WCAEYDEWGNLLNEENPHQLQQLIRL-- 269 +V G W EYD G L+ E P Sbjct: 597 TGVVDPLGRLTRTLWDSQWFEPLRTTGPDGATWRYEYDRQGLLVQETAPDGGVTRYAYDA 656 Query: 270 PGQ 272 GQ Sbjct: 657 QGQ 659 Score = 42.9 bits (99), Expect = 0.028, Method: Composition-based stats. Identities = 21/130 (16%), Positives = 35/130 (26%), Gaps = 28/130 (21%) Query: 6 RIARDAHYLYRYDRHGRLT-----------------------EKTDLIPEGVIRTDDERT 42 R Y D GR T ++ + + + Sbjct: 1056 RTQGTLATRYALDALGRRTGSWTRSGLGLQDAAGEDWRAAWQQQVEALAQRGPSAAVGLL 1115 Query: 43 HRYHYDSQHRLVHYTRTQYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQV 102 +Y YD+ L + + + YD G RV + + G R +V Sbjct: 1116 KQYRYDAVGELRESVHSHKG----RTSWRYDATG-RVEQVLRAGPGAQPGGGVQGRSEEV 1170 Query: 103 TWYGWDGDRL 112 Y G+ L Sbjct: 1171 FRYDPAGNLL 1180 >UniRef50_D1T3N5 YD repeat protein n=1 Tax=Acidovorax avenae subsp. avenae ATCC 19860 RepID=D1T3N5_9BURK Length = 598 Score = 250 bits (639), Expect = 7e-65, Method: Composition-based stats. Identities = 116/368 (31%), Positives = 159/368 (43%), Gaps = 47/368 (12%) Query: 2 WPDNRIA----------RDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQH 51 WP NRI + YRYD G + D R R YD+ H Sbjct: 116 WPGNRIGWSTPERDSDGQGTPIRYRYDAFGNRVQALHA---------DGRAQRLRYDALH 166 Query: 52 RLVHYTRTQYAEPLVE--SRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDG 109 +L + + + + Y YDP GRR+A+ V R G + T+ GWDG Sbjct: 167 QLREVWQREGTRGAWQRVACYRYDPFGRRLARTVIGDSRYNHG--AALGSAATTYAGWDG 224 Query: 110 DRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVF 169 DRL ++ + +Y+P SF PL+R+E Q L+ GGE + +F Sbjct: 225 DRLMHVEGPQGLQHILYEPDSFVPLLRLERDRAIPTPVQAMF---ALENQGGESHAAALF 281 Query: 170 PPVLVQMLDRLESEI--------------LADRVSEESRRWLASCGLTVEQMQNQMDPVY 215 + + LE + L + EE+ L++ +V Q + Sbjct: 282 GELPRAQREWLEQTLNDALGPHGDALRARLQAGLPEETGVLLSAGLRSVHQQRQSAAQ-- 339 Query: 216 TPARKIHLYHCDHRGLPLALVSTEGA----TEWCAEYDEWGNLLNEENPHQLQQLIRLPG 271 A +I CDH G P+ALV G W A Y WG + E +PH + Q IR G Sbjct: 340 AHATRIRHVLCDHLGTPIALVDANGPQAGLVTWAATYHAWGAVREEYDPHGIGQDIRFQG 399 Query: 272 QQYDEESGLYYNRHRYYDPLQGRYITQDPIGLKGGWNFYQYPL-NPVQYIDSMGLASKYG 330 QQ+D E+GL+YNR RYYDP+ G+Y+TQDPIGLKGG N Y +P D GL K Sbjct: 400 QQFDAETGLHYNRFRYYDPMLGQYVTQDPIGLKGGLNKSNYSGSSPAINCDPKGLDFKDK 459 Query: 331 HLNNGGYG 338 G G Sbjct: 460 ATKGGEVG 467 Score = 54.0 bits (128), Expect = 1e-05, Method: Composition-based stats. Identities = 39/230 (16%), Positives = 63/230 (27%), Gaps = 41/230 (17%) Query: 7 IARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLV 66 ++ A Y YD G+L RY YD+ RL R V Sbjct: 4 LSTLAQRRYWYDPLGQLVGVQTP----------GEATRYGYDAWQRLSGLHRAGQGTQEV 53 Query: 67 ESRYLYDPLGRRV-------------AKRVWRRERDL-----------TGWMSLSRKPQV 102 + DP G R+ ++ W RE G R V Sbjct: 54 RQHWALDPAGNRLPAPPEAGVMAPHADRQAWAREVRDHLQDPDFDLLRAGDGPGERAGPV 113 Query: 103 TWYGWDGDRLT----TIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQ 158 T W G+R+ +D Y+ +F ++ A+ R L++ Sbjct: 114 TH--WPGNRIGWSTPERDSDGQGTPIRYRYDAFGNRVQA-LHADGRAQRLRYDALHQLRE 170 Query: 159 SGGEDGGSVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQ 208 +G + V D + + + A+ G Sbjct: 171 VWQREGTRGAWQRVACYRYDPFGRRLARTVIGDSRYNHGAALGSAATTYA 220 >UniRef50_D1T3Q3 YD repeat protein (Fragment) n=2 Tax=Acidovorax avenae subsp. avenae ATCC 19860 RepID=D1T3Q3_9BURK Length = 561 Score = 250 bits (639), Expect = 7e-65, Method: Composition-based stats. Identities = 120/371 (32%), Positives = 160/371 (43%), Gaps = 57/371 (15%) Query: 2 WPDNRIA-----RDAH----------------YLYRYDRHGRLTEKTDLIPEGVIRTDDE 40 WP NRI DA YRYD G + D Sbjct: 49 WPGNRIGWNTPEPDADGAGSDGNDGSAGKGILIRYRYDAFGNRVQALHT---------DG 99 Query: 41 RTHRYHYDSQHRLVHYTRTQYAEPLVE--SRYLYDPLGRRVAKRVWRRERDLTGWMSLSR 98 R R YD+ HRL + + E + + Y YDP GRR+AK V+ D + + + Sbjct: 100 RAQRLRYDALHRLREVWQREAGEAGWQRVACYRYDPFGRRLAKTVFGHGNDNSN--AAAE 157 Query: 99 KPQVTWYGWDGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQ 158 T+ GWDGDRL + + +Y+PGSF PL+R+E Q + + + Sbjct: 158 PSTTTYAGWDGDRLVHTEGPQGLQHVLYEPGSFAPLLRLEREQAIPTAMQALLVMEEDRG 217 Query: 159 SGGEDGGSVVFPPV------LVQMLDRLESEILADRVSEESRRWLA--SCGLTVEQMQNQ 210 S +DG P L + L L D + LA GL E Sbjct: 218 SVADDGPDGGESPAAVLFAGLPRTQRELLERALQDATGPQGDALLARLQAGLPDEAGALL 277 Query: 211 MDPVYT-----------PARKIHLYHCDHRGLPLALVSTEGA----TEWCAEYDEWGNLL 255 V + A +I + CDH G P+ALV G W A + WG + Sbjct: 278 AAGVQSVRQQQQAATQAHATRIRHFLCDHLGTPIALVDANGPQAGLVTWAATHHAWGAVR 337 Query: 256 NEENPHQLQQLIRLPGQQYDEESGLYYNRHRYYDPLQGRYITQDPIGLKGGWNFYQYPLN 315 E +P + Q IR GQQ D E+GL+YNRHRYYDP+ G+Y+TQDPIGL GG + YPLN Sbjct: 338 EEYDPLGIGQPIRFQGQQLDAETGLHYNRHRYYDPMLGQYVTQDPIGLMGGIHKQAYPLN 397 Query: 316 PVQYIDSMGLA 326 P+Q D +GL Sbjct: 398 PIQASDPLGLF 408 >UniRef50_C5CZG8 RHS protein n=1 Tax=Variovorax paradoxus S110 RepID=C5CZG8_VARPS Length = 1609 Score = 250 bits (638), Expect = 9e-65, Method: Composition-based stats. Identities = 97/362 (26%), Positives = 140/362 (38%), Gaps = 81/362 (22%) Query: 4 DNRIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAE 63 DN + A Y +D G L E++ + + +D +R+ Sbjct: 1212 DNLLKDYAGTHYTWDERGNLIERSR----------NGEITTFTWDGFNRMRSAETF---- 1257 Query: 64 PLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRT--- 120 + + YD LGRR+AKR T +GWDGD L T Sbjct: 1258 -GETTSFSYDALGRRIAKRSSHA---------------TTLFGWDGDTLAFESTQSTEGQ 1301 Query: 121 ---------RIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPP 171 + I++PGSF PL+++ A+ S ++ +GG Sbjct: 1302 QELQAWRGDSVHYIHEPGSFVPLVQIRQ-----AQAVALSQTTDVKALIAANGGRYDIEQ 1356 Query: 172 VLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGL 231 + ++L++ P +I Y CDH G Sbjct: 1357 DPLWNGEQLKT------------------------------PQAFAREEIAFYQCDHLGT 1386 Query: 232 PLALVSTEGATEWCAEYDEWGN----LLNEENPHQLQQLIRLPGQQYDEESGLYYNRHRY 287 P L EG W A+Y WG + + IR GQ +D+E+GL+YNRHRY Sbjct: 1387 PQELTDHEGRIAWSAQYKAWGEAKQAISEAGRKAGFRNPIRFQGQYFDDETGLHYNRHRY 1446 Query: 288 YDPLQGRYITQDPIGLKGGWNFYQYPLNPVQYIDSMGLASKYGHLNNGGYGARPNKPPTP 347 YDP GR++++DPIGL GG N QY NP+ +ID +GLA K NN G P Sbjct: 1447 YDPSCGRFVSKDPIGLAGGSNLQQYAPNPLGWIDPLGLAGKGITPNNKGTRTTIEGGNLP 1506 Query: 348 DP 349 P Sbjct: 1507 QP 1508 Score = 80.2 bits (196), Expect = 2e-13, Method: Composition-based stats. Identities = 56/282 (19%), Positives = 82/282 (29%), Gaps = 42/282 (14%) Query: 14 LYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYLYD 73 Y YD HG L T D + Y YD++HR+ + + YD Sbjct: 698 DYVYDAHGNLKTHT---------RADGSSVHYAYDARHRITGILDAEGG----AWKRDYD 744 Query: 74 PLGRRVAKRVWRRERDLTGWMSLSRKPQVT---------WYGWDGDRLTTIQNDRTRIQT 124 G + + + + R ++T Y DG + Q Sbjct: 745 ASGNLTEEIDPLGHKTEYAYDNAGRPVRITDAKGGIKTLAYTPDGQLASHTDCSGKTTQW 804 Query: 125 IYQPGSFTPLIRVETATGELAKTQRRSLADTLQ-------QSGGEDGGSVVFPPVLVQML 177 Y L R+ A G+ + + + Q + +V P + Sbjct: 805 AYD--GRGRLARITNALGQATRFRYTEAGEAAQSAMPGQANNHPGQLEEIVHPDNTSEYF 862 Query: 178 DRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVS 237 L RR S G T + Q K YH D G L + Sbjct: 863 AHDAEGRLLAHTDALGRR--TSYGYTRAGLVAQRTDAAGHTLK---YHWDLLGRLRELHN 917 Query: 238 TEGATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEESG 279 G+ + YD G LL E + R YDE SG Sbjct: 918 ENGS-RYDFRYDPVGKLLEETGFDRKGTQYR-----YDEASG 953 Score = 55.2 bits (131), Expect = 6e-06, Method: Composition-based stats. Identities = 63/339 (18%), Positives = 96/339 (28%), Gaps = 68/339 (20%) Query: 15 YRYDRHGRLTEKTDLIPE----GVIRTD--------DERTHRYHYDSQHRLVHYTRTQYA 62 + +D GRL TD + G R T +YH+D RL + Sbjct: 862 FAHDAEGRLLAHTDALGRRTSYGYTRAGLVAQRTDAAGHTLKYHWDLLGRLREL----HN 917 Query: 63 EPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLS---------RKPQVTWYGWDGDRLT 113 E + YDP+G+ + + + R+ + S + G RL+ Sbjct: 918 ENGSRYDFRYDPVGKLLEETGFDRKGTQYRYDEASGVLAEVIEAGHSTRLAFDPLG-RLS 976 Query: 114 TIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVL 173 Q + Y L+ A L R+ + D G V Sbjct: 977 ERQAGDDAERFAYDRN--GRLVEATNAEARLQWFYDRAGNLVREHQHYLDHG---HTAVW 1031 Query: 174 VQMLDRLESEILADRVSEESRRWL-ASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLP 232 D L I + R +WL G + + D + +H Sbjct: 1032 QHGYDELNQRIASIRPDGHVTQWLTYGSGHVHGLLVDGQDILGFERDDLH---------- 1081 Query: 233 LALVSTEGA-TEWCAEYDEWGNLLNEENPHQLQQLIRLPG----QQYDEESGLY------ 281 + +G YD G LL ++ I G YD+ L Sbjct: 1082 REIGREQGNGLTQKLHYDPAGRLLEQQISQTRPGAIEAVGIRRSYAYDKAGQLVAIGDSR 1141 Query: 282 --YNRHRYYDPLQGRYITQ-----------DPIGLKGGW 307 +R YDP GR + DP G G Sbjct: 1142 RGNLSYR-YDP-VGRLLEAHSRLGRETFAFDPAGNIGSP 1178 Score = 52.5 bits (124), Expect = 3e-05, Method: Composition-based stats. Identities = 42/286 (14%), Positives = 75/286 (26%), Gaps = 43/286 (15%) Query: 2 WPDNRIARDAHYL-----YRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHY 56 + + + R +YD G D D +D RL + Sbjct: 593 YSHHLVTRYTDRTGRGMNLQYDGTG-----ADAKAVREWSDDGSFALTLEWDKNIRLTYL 647 Query: 57 TRTQYAEPLVESRYLYDPLG---------RRVAKRVWRRERDLTGWMSLSRKPQVTWYGW 107 T E Y YD LG +R + +++T + Y Sbjct: 648 TDAMGGETW----YYYDVLGYTYRIIHPDKREEWFLRDDAKNITRHIHTDGTTDDYVYDA 703 Query: 108 DGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSV 167 G+ T + D + + Y R+ +R + + D Sbjct: 704 HGNLKTHTRADGSSVHYAYDARH-----RITGILDAEGGAWKRDYDASGNLTEEID---- 754 Query: 168 VFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCD 227 P+ + ++ R+++ Q+ + D + + D Sbjct: 755 ---PLGHKTEYAYDNAGRPVRITDAKGGIKTLAYTPDGQLASHTDCSGKTTQWAY----D 807 Query: 228 HRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQ 273 RG + + G Y E G P Q PGQ Sbjct: 808 GRGRLARITNALGQAT-RFRYTEAGEAAQSAMPGQANN---HPGQL 849 Score = 49.8 bits (117), Expect = 2e-04, Method: Composition-based stats. Identities = 42/261 (16%), Positives = 79/261 (30%), Gaps = 35/261 (13%) Query: 7 IARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLV 66 I +D GRL+E R + R+ YD RLV T + Sbjct: 959 IEAGHSTRLAFDPLGRLSE----------RQAGDDAERFAYDRNGRLVEATNAE-----A 1003 Query: 67 ESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWD--GDRLTTIQNDRTRIQT 124 ++ YD G V + + V +G+D R+ +I+ D Q Sbjct: 1004 RLQWFYDRAGNLVREHQHYLD---------HGHTAVWQHGYDELNQRIASIRPDGHVTQW 1054 Query: 125 IYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEI 184 + + V+ ++ +R L + + G + ++L++ S+ Sbjct: 1055 LTYGSGHVHGLLVDGQ--DILGFERDDLHREIGREQGNGLTQKLHYDPAGRLLEQQISQT 1112 Query: 185 LADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEW 244 + R + + + + Y D G L S G Sbjct: 1113 RPGAIEAVGIRRSYAYDKAGQLVAIGDSRRGNLS-----YRYDPVGRLLEAHSRLGRET- 1166 Query: 245 CAEYDEWGNLLNEENPHQLQQ 265 +D GN+ + + Q Sbjct: 1167 -FAFDPAGNIGSPSDVGADTQ 1186 >UniRef50_D1T3N4 YD repeat protein n=2 Tax=Betaproteobacteria RepID=D1T3N4_9BURK Length = 1584 Score = 250 bits (637), Expect = 1e-64, Method: Composition-based stats. Identities = 93/349 (26%), Positives = 129/349 (36%), Gaps = 69/349 (19%) Query: 4 DNRIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRT---Q 60 NR+ Y YD GRL K R + YD+QHR+ H + Q Sbjct: 1161 HNRVKVLQDKRYDYDGFGRLIRK---------RIGGHTELHFRYDAQHRMTHASVIRAGQ 1211 Query: 61 YAEPLVES-RYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDR 119 EPL + RY YD +GRR+AK T + W+G RL Sbjct: 1212 NGEPLRQVFRYHYDAIGRRIAKE---------------DDFGATLFTWEGMRLLQECRGG 1256 Query: 120 TRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDR 179 +Y+P S+ PL R++ A + A G P R Sbjct: 1257 QSSTYLYEPESYVPLARIDGA----GAIEEHPAARYAFGPDARAGKQASVPDTNPDWSSR 1312 Query: 180 LESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTE 239 + A+ G +V P +++ +H GLP + T Sbjct: 1313 FNAVA-------------ANAGGSVSGTSAPSSAPMEPTAQVYYFHVQPNGLPEEMSDTR 1359 Query: 240 GATEWCAEYDEWGNLLNE------------------------ENPHQLQQLIRLPGQQYD 275 G W A Y WG + E ++ + Q +R+ GQ D Sbjct: 1360 GNLVWQARYLTWGATVQEHWQAFDATGRPADAPLAETCDRPQQSFAPMPQNLRMQGQYLD 1419 Query: 276 EESGLYYNRHRYYDPLQGRYITQDPIGLKGGWNFYQYPLNPVQYIDSMG 324 E+GL+YN RYYDP G + T DPIGL GG N +QY NP+ +ID G Sbjct: 1420 RETGLHYNTFRYYDPDLGAFTTPDPIGLAGGINLHQYAPNPIAWIDPWG 1468 Score = 49.8 bits (117), Expect = 2e-04, Method: Composition-based stats. Identities = 53/305 (17%), Positives = 79/305 (25%), Gaps = 31/305 (10%) Query: 4 DNRIARDAHYLYRYDRHGRLTEKTDLIPEGVIR--TDDERTHRYHYDSQHRLVHYTRTQY 61 +R+ + Y + R V+R TDD +R+ YD HR T Q Sbjct: 499 HHRLPAGLNCHYAWQRFDADLGHRAGPHWRVVRHWTDDGADYRFDYDLSHRTTQVTDAQG 558 Query: 62 AEPLVES-------RYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTT 114 Y D LG + + R + Y G+ + Sbjct: 559 RTRRWCWNGDHEITAYT-DALG-ATWTQEYNELRQCLRHVDPLGHATTWVYDDAGNPIAQ 616 Query: 115 IQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLV 174 + +TP+ S + E+ + Sbjct: 617 TDPLGRTQRWR-----WTPVPASLMQASIGPAGDAWSYRYDDNGNLLEETDPLGHRTAYA 671 Query: 175 QMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLA 234 L I + +W A + ++ DHRG PL Sbjct: 672 NDDRGLPIVITDAHGGRKRLQWDARG------LPTAFTDCSGQTTRLSY---DHRGHPLE 722 Query: 235 LVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRL--PGQQYDEESGLYYNRHRYYDPL- 291 G T E+D G LL P R GQ L + H Y+P Sbjct: 723 ETDALGQTT-RTEHDALGRLLRITFPDGASHAWRYDAAGQCVQARDALGHTTHYSYNPRG 781 Query: 292 --QGR 294 GR Sbjct: 782 QLLGR 786 Score = 48.3 bits (113), Expect = 7e-04, Method: Composition-based stats. Identities = 48/291 (16%), Positives = 76/291 (26%), Gaps = 36/291 (12%) Query: 12 HYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHY-------TRTQYAEP 64 YRY G L + P+G R HYD +++ E Sbjct: 914 RLAYRYTPTGELAGAEEYAPDG--RRLSRHAW--HYDRLGQMLREHSDCTIGGHGTDTEH 969 Query: 65 LVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQ-------VTWYGWDGDRLTTIQN 117 R+ YD LG+R+A + Q V+ + DG ++ Sbjct: 970 ASVVRHAYDALGQRIATVLPDGRTVNYLHYGSGHLHQINLDGIVVSDFERDGLHREVLRT 1029 Query: 118 DRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQML 177 G+ T R A + + P + +L Sbjct: 1030 QGRLASRFAYDGAGRRSATWVRPAVLRMGTARG--AGGWSPGDADWMRRLRHPGLEDTLL 1087 Query: 178 DRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGL------ 231 R + + V EE R A+ E + +H D G Sbjct: 1088 KRYGHDANGELVHEEHSRHGATVRRYDEAGRIVASLAERHPALQEAFHFDPAGNRIGALE 1147 Query: 232 PLALVSTEGATE----------WCAEYDEWGNLLNEENPHQLQQLIRLPGQ 272 AL S +YD +G L+ + + R Q Sbjct: 1148 AQALSSQGRGWVRHNRVKVLQDKRYDYDGFGRLIRKRIGGHTELHFRYDAQ 1198 Score = 45.2 bits (105), Expect = 0.006, Method: Composition-based stats. Identities = 45/304 (14%), Positives = 78/304 (25%), Gaps = 60/304 (19%) Query: 7 IARDAHYLYRYDRHGRL-------TEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRT 59 +A A Y++ G ++ + + H YD+ HRL H + Sbjct: 370 LAVTAQGHYQW--FGNAQDALPGGVASGGVLQLQRVEDRNGNFHALRYDAHHRLAHLADS 427 Query: 60 QYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQN-- 117 + Y P RR+ + V R + L+R +L + + Sbjct: 428 AG----RLLAFEYFPESRRLRQIVLRTGVEGETPEVLARYEHHGDLQSLQAQLAKVTDRC 483 Query: 118 DRTRIQTIYQPGSFTP----------------LIRVETATGELAKTQRR---SLADTLQQ 158 + Y+ G + G + R AD Sbjct: 484 GEVVRRFTYEHGLLVHHRLPAGLNCHYAWQRFDADLGHRAGPHWRVVRHWTDDGADYRFD 543 Query: 159 SGGEDGGSVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPA 218 + V + ++ + Q +DP+ Sbjct: 544 YDLSHRTTQVTDAQGRTRRWCWNGDHEITAYTDALGATWTQEYNELRQCLRHVDPLGHAT 603 Query: 219 RKIHLYHCDHRGLPLALVSTEGAT----------------------EWCAEYDEWGNLLN 256 ++ D G P+A G T W YD+ GNLL Sbjct: 604 TWVY----DDAGNPIAQTDPLGRTQRWRWTPVPASLMQASIGPAGDAWSYRYDDNGNLLE 659 Query: 257 EENP 260 E +P Sbjct: 660 ETDP 663 Score = 43.3 bits (100), Expect = 0.023, Method: Composition-based stats. Identities = 33/242 (13%), Positives = 66/242 (27%), Gaps = 38/242 (15%) Query: 18 DRHGRLTEKTDLIPEGVI--RTDDERTHRYHY-----DSQHRLVHYTR--TQYAEPLVES 68 DR G + + ++ R Y + D HR + R + + + Sbjct: 481 DRCGEVVRRFTYEHGLLVHHRLPAGLNCHYAWQRFDADLGHRAGPHWRVVRHWTDDGADY 540 Query: 69 RYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQP 128 R+ YD ++ R + + + + W+GD T D + Sbjct: 541 RFDYD-----LSHRTTQ---------VTDAQGRTRRWCWNGDHEITAYTDALGATWTQEY 586 Query: 129 GSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADR 188 +R G + + Q+ + + ++ Sbjct: 587 NELRQCLRHVDPLGHATTWVYDDAGNPIAQTDP-------LGRTQRWRWTPVPASLMQAS 639 Query: 189 VSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEG---ATEWC 245 + W + + DP+ Y D RGLP+ + G +W Sbjct: 640 IGPAGDAWSYRYDDN-GNLLEETDPLGHRTA----YANDDRGLPIVITDAHGGRKRLQWD 694 Query: 246 AE 247 A Sbjct: 695 AR 696 Score = 43.3 bits (100), Expect = 0.023, Method: Composition-based stats. Identities = 43/238 (18%), Positives = 69/238 (28%), Gaps = 37/238 (15%) Query: 13 YLYRYDRHGRLTEKTDLIPEGVIRTDDER------------THRYHYDS----------Q 50 + YRYD +G L E+TD + +D+R R +D+ Sbjct: 647 WSYRYDDNGNLLEETDPLGHRTAYANDDRGLPIVITDAHGGRKRLQWDARGLPTAFTDCS 706 Query: 51 HRLVHYTRTQYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGW--D 108 + + PL E+ D LG + R E D G + P + W D Sbjct: 707 GQTTRLSYDHRGHPLEET----DALG-----QTTRTEHDALGRLLRITFPDGASHAWRYD 757 Query: 109 GDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQR--RSLADTLQQSGGEDGGS 166 D T Y L+ G LA T A L E+ + Sbjct: 758 AAGQCVQARDALGHTTHYSYNPRGQLLGRTRNVGGLASTIHLGYDAAHRLAALVNENRQT 817 Query: 167 VVFPPVLV--QMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIH 222 F Q+ + + + + + + P + P + IH Sbjct: 818 YQFAYDAADQQVGETRIDGSRHVLERDTAGQVVGVTEYPMPPGAWDDVPGHAPVQPIH 875 >UniRef50_UPI00016A9A82 Rhs family protein n=2 Tax=Burkholderia oklahomensis RepID=UPI00016A9A82 Length = 1489 Score = 242 bits (617), Expect = 2e-62, Method: Composition-based stats. Identities = 98/364 (26%), Positives = 131/364 (35%), Gaps = 93/364 (25%) Query: 3 PDNRIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYA 62 NR+ YRYD HGRL EK RT YD +H+LV + Sbjct: 1109 EGNRLLMSGDRRYRYDAHGRLVEK---------RTGGHTIQHLKYDVEHQLVEVNTVRRG 1159 Query: 63 EPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRI 122 R+ YD LGRR+AKR T + WDG RL Q + Sbjct: 1160 VEQ-TVRFSYDALGRRIAKR---------------DAFGTTRFAWDGMRLVQEQRGHQAV 1203 Query: 123 QTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLES 182 +Y+ + PL R++ + L RL Sbjct: 1204 TYLYEGDGYVPLARIDAINDD------------------------------SHWLWRLYH 1233 Query: 183 EILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGAT 242 E + E++ P KI+ +H + G P L G Sbjct: 1234 EDERGGPTVEAK----------------------PEAKIYYFHANASGAPEELTDGGGRV 1271 Query: 243 EWCAEYDEWGNLLNEENPHQLQ------------QLIRLPGQQYDEESGLYYNRHRYYDP 290 W Y WGN + +E + Q Q +RL GQ D E+G Y+ RYYDP Sbjct: 1272 VWRTRYRAWGNTVLQEYAPEFQANPAGDVMQPLPQALRLQGQYEDLETGFCYSTFRYYDP 1331 Query: 291 LQGRYITQDPIGLKGGWNFYQYPLNPVQYIDSMGLA----SKYGHLNNGGYGARPNKPPT 346 GR+IT DPIGL GG N YQY NP+ +ID G G+ G Y ++P Sbjct: 1332 DVGRFITPDPIGLAGGLNQYQYAPNPLTWIDPWGWVETPLDAPGYSTYGLYHPGASEPYY 1391 Query: 347 PDPS 350 + Sbjct: 1392 VGHT 1395 Score = 59.0 bits (141), Expect = 3e-07, Method: Composition-based stats. Identities = 36/270 (13%), Positives = 66/270 (24%), Gaps = 25/270 (9%) Query: 12 HYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYL 71 + +D GR+T +TD + T Y YD + R+ + RY Sbjct: 710 TTRFEHDARGRMTARTDAL---------GHTTHYRYDGRDRIAEAQLPNGG----DERYR 756 Query: 72 YDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQPG-- 129 + A + + R T +G ++ + ++T+Y Sbjct: 757 WSLADELTAFVDGNGHTTAFAYDAAGRL--TTRIDANGHQIGLEYDAAGNLRTLYNELRD 814 Query: 130 ----SFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEIL 185 ++ R+ G + D L + Sbjct: 815 SYRFAYDAADRLIEQVGPDGVRVEYQRDARGAPVVVRQAAGTPEQITIELERDALGRLVR 874 Query: 186 ADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCD-HRGLPLALVSTEGATEW 244 + + G + +D A D G +V +G Sbjct: 875 KRTPETVTTYGYDATGRLDRVTRTHLDGRPMDAVTFAYDELDRLVGETSEVVGDDGRIRM 934 Query: 245 CA---EYDEWGNLLNEENPHQLQQLIRLPG 271 E+D GN P G Sbjct: 935 TRLAHEHDALGNRTGTTLPDGRTLSWLYYG 964 Score = 55.2 bits (131), Expect = 6e-06, Method: Composition-based stats. Identities = 49/291 (16%), Positives = 78/291 (26%), Gaps = 49/291 (16%) Query: 8 ARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVE 67 + YD HGRL E + T + YD+ HR YA E Sbjct: 409 RNANQLHFHYDAHGRLDE---------LATMAGHRVQIEYDASHRERMSRVILYAGGATE 459 Query: 68 --SRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTI 125 Y Y G + R+ + Y G Sbjct: 460 CLVSYAYTADG-----------LLASVSDGEGRERRRFGYDPAGRMTMHRLPGGKTAHYA 508 Query: 126 YQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDG---GSVVFPPVLVQMLDRLES 182 ++ L T A+ D + D + V + L + Sbjct: 509 WEAFERNALAEENGLTDREARVVEHWTDDGERYRFAYDFTRQATRVTDHLGRTRLCEWNA 568 Query: 183 EILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGAT 242 + L ++ + ++ ++P R + D RGLP LV+ G T Sbjct: 569 DYLVTAHTDALGQIWRFDWSPNRELVGFVEPNGATTRLRY---DDGRGLPTELVNALGET 625 Query: 243 E---------------------WCAEYDEWGNLLNEENPHQLQQLIRLPGQ 272 W ++D GN + E +P + RL Q Sbjct: 626 TQFAWHPLWMALEQQTLADGRQWQYQFDMRGNRVGETDPLGQRTEFRLNRQ 676 Score = 53.3 bits (126), Expect = 2e-05, Method: Composition-based stats. Identities = 49/295 (16%), Positives = 83/295 (28%), Gaps = 53/295 (17%) Query: 11 AHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHY---------------DSQHRLVH 55 + YD GR+T + R +T Y + D + R+V Sbjct: 482 ERRRFGYDPAGRMT---------MHRLPGGKTAHYAWEAFERNALAEENGLTDREARVVE 532 Query: 56 YTRTQYAEPLVESRYLY----------DPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWY 105 + R+ Y D LGR R+ D Q+ + Sbjct: 533 HWTDDGE----RYRFAYDFTRQATRVTDHLGR---TRLCEWNADYLVTAHTDALGQIWRF 585 Query: 106 GWDGDR--LTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGED 163 W +R + ++ + + Y G P + A GE + L L+Q D Sbjct: 586 DWSPNRELVGFVEPNGATTRLRYDDGRGLP-TELVNALGETTQFAWHPLWMALEQQTLAD 644 Query: 164 GGSVVF------PPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTP 217 G + V +E +R + A G+T + + Sbjct: 645 GRQWQYQFDMRGNRVGETDPLGQRTEFRLNRQGRPAAIVDARGGITQFGWDTRHRLIART 704 Query: 218 --ARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRLP 270 + + D RG A G T YD + + P+ + R Sbjct: 705 DCSGITTRFEHDARGRMTARTDALGHTT-HYRYDGRDRIAEAQLPNGGDERYRWS 758 Score = 49.0 bits (115), Expect = 4e-04, Method: Composition-based stats. Identities = 45/282 (15%), Positives = 80/282 (28%), Gaps = 63/282 (22%) Query: 7 IARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDD------------ERTHRYHYDSQHRLV 54 +A + Y++D G +TD + + + ++ +D++HRL+ Sbjct: 642 LADGRQWQYQFDMRGNRVGETDPLGQRTEFRLNRQGRPAAIVDARGGITQFGWDTRHRLI 701 Query: 55 HYTRTQYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTT 114 T + +R+ +D GR A+ T Y +DG Sbjct: 702 ARTDCSG----ITTRFEHDARGRMTART--------------DALGHTTHYRYDGR---- 739 Query: 115 IQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLV 174 + + G + R SLAD L +G + F Sbjct: 740 -----------------DRIAEAQLPNGGDER-YRWSLADELTAFVDGNGHTTAFAYDAA 781 Query: 175 QML--------DRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHC 226 L ++ E A L +++ P Y Sbjct: 782 GRLTTRIDANGHQIGLEYDAAGNLRTLYNELRDSYRFAYDAADRLIEQVGPDGVRVEYQR 841 Query: 227 DHRGLPLALVSTEG---ATEWCAEYDEWGNLLNEENPHQLQQ 265 D RG P+ + G E D G L+ + P + Sbjct: 842 DARGAPVVVRQAAGTPEQITIELERDALGRLVRKRTPETVTT 883 >UniRef50_B2HXH5 Rhs family protein n=5 Tax=Acinetobacter baumannii RepID=B2HXH5_ACIBC Length = 1635 Score = 241 bits (614), Expect = 6e-62, Method: Composition-based stats. Identities = 95/333 (28%), Positives = 128/333 (38%), Gaps = 76/333 (22%) Query: 4 DNRIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAE 63 +N + Y+YD G+L + + +D RLV QY Sbjct: 1221 NNIVQEYLDQQYQYDAFGQLIRQKSSQGD----------LNLEWDVFGRLVRSRNNQY-- 1268 Query: 64 PLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQ 123 + Y YD LGRR+ KR + + Q YGWDGD L + Sbjct: 1269 ---TAEYRYDALGRRIQKRSKHHH---------TGQEQNISYGWDGDTLAYESSADLTKH 1316 Query: 124 TIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESE 183 Y+ SF PL++ + Q + S+ P+ Sbjct: 1317 YFYEKDSFVPLLQ---------AAYHHPIELHQTQDWSDKTYSIYKDPLW---------- 1357 Query: 184 ILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATE 243 TV+Q Q D + YHCDH G P + GA Sbjct: 1358 ------------------NTVKQSQGFDD--------VWFYHCDHLGTPQEMSDQTGAII 1391 Query: 244 WCAEYDEWGNLLNEENPHQL-------QQLIRLPGQQYDEESGLYYNRHRYYDPLQGRYI 296 W AEY WG E+ IR GQ +DEE+GL+YNR+RYY P GR+I Sbjct: 1392 WKAEYKAWGECKLEQTNSDFFEKSEIISNNIRFQGQYFDEETGLHYNRYRYYSPYVGRFI 1451 Query: 297 TQDPIGLKGGWNFYQYPLNPVQYIDSMGLASKY 329 ++DPIGL GG+N Y Y NPVQ++D GLA Sbjct: 1452 SKDPIGLLGGFNVYAYTANPVQWVDPYGLAPCS 1484 Score = 63.3 bits (152), Expect = 2e-08, Method: Composition-based stats. Identities = 52/261 (19%), Positives = 91/261 (34%), Gaps = 43/261 (16%) Query: 3 PDNRIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYA 62 P +RI + + +D GRL ++T ++++T + YD LV + Sbjct: 957 PKDRIQQ-----FIFDSMGRLEQRTAGYGYQGQELEEKQTEEFSYDGLGNLVQAKNAE-- 1009 Query: 63 EPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWD--GDRLTTIQNDRT 120 ++ YD G + + +++K V + +D +R TTI+ D Sbjct: 1010 ---TNLQWFYDAAGNLIKEHH---------QDVVTQKTAVWKHVYDELNNRTTTIRPDGQ 1057 Query: 121 RIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRL 180 +I + GS +L S D + L + L Sbjct: 1058 KIDWL-SYGS--------------GHVYGMALNGEDVVSFERDD---LHRETLRHYANGL 1099 Query: 181 ESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKI-HLYHCDHRGLPLALVST- 238 + D V +++ + S Q Q Q + + + I LYH D G + T Sbjct: 1100 SQQQSYDEVGRLTQQLMLSGHDKGYQAQTQNNAIQHTNQLIERLYHYDKTGELTLIKDTR 1159 Query: 239 EGATEWCAEYDEWGNLLNEEN 259 GA +YD G LL + Sbjct: 1160 RGAI--HYKYDPVGRLLEATS 1178 Score = 62.1 bits (149), Expect = 4e-08, Method: Composition-based stats. Identities = 48/298 (16%), Positives = 97/298 (32%), Gaps = 50/298 (16%) Query: 9 RDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVES 68 + Y YD G +T++TD + +T +Y +D RL A Sbjct: 859 KGQQTRYEYDAAGLITKRTDPL---------NQTLKYQWDRLSRLKRLINENGAS----Y 905 Query: 69 RYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQP 128 ++YD GR V + + + + + + RLTT + ++ Sbjct: 906 EFVYDAAGRLVKEIDFDGKETVYAYDEYNG------------RLTTSIEVASTYGQDFKD 953 Query: 129 GSFTPLIRVETAT-GELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILAD 187 + P R++ + + ++R+ Q E+ + F + ++ Sbjct: 954 RA-APKDRIQQFIFDSMGRLEQRTAGYGYQGQELEEKQTEEFSYDGL-------GNLVQA 1005 Query: 188 RVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWCAE 247 + +E + +W + + +Q A H+Y D + +G Sbjct: 1006 KNAETNLQWFYDAAGNLIKEHHQDVVTQKTAVWKHVY--DELNNRTTTIRPDGQKIDWLS 1063 Query: 248 YDE---WGNLLNEENPHQLQQLIRLPGQQYDEESGLYYNR----HRYYDPLQGRYITQ 298 Y +G LN E+ ++ E+ +Y + YD GR Q Sbjct: 1064 YGSGHVYGMALNGEDVVSFERDD------LHRETLRHYANGLSQQQSYD-EVGRLTQQ 1114 Score = 59.8 bits (143), Expect = 2e-07, Method: Composition-based stats. Identities = 55/317 (17%), Positives = 99/317 (31%), Gaps = 38/317 (11%) Query: 18 DRHGRLTEKTDLIPEGVIRT---DDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYLYDP 74 D G +TE I R D+ + + D + + T E+ Y YD Sbjct: 630 DIDGNVTEYYYGITGYTYRIIYPDNLQEWFFR-DQAKNITSHIATDG----TETSYTYDE 684 Query: 75 LGRRVAKRVWRRERDLTGWMSLSR------KPQVTWY-GWDGDRLTTIQNDRTRIQTIYQ 127 G ++ + Q W+ +D + D + +T+Y Sbjct: 685 RGNVLSMVQADGSTFYYEYDEKDNLIGFVDAEQGRWFKEYDASGNIIKEIDPLKRETVYA 744 Query: 128 PGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPV-----LVQMLDRLES 182 + + + A G + + + + + ++ + + Sbjct: 745 YNAMGLVTSITDAKGGKKTLKYDDRGNLISYTDCSGKETKWHYDDRGRVKFIENALKQKV 804 Query: 183 EILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGAT 242 E ++ E R+ +A GL + + + H H D G L + +G Sbjct: 805 EYFYTELTTELRQPIA-KGLPLNAFGQLEKIKHADGAEEHFIH-DAEGRLLVHIDPKGQQ 862 Query: 243 EWCAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEESGL----YYNRHRY---YDPLQGRY 295 EYD G + +P L Q ++ Q+D S L N Y YD GR Sbjct: 863 T-RYEYDAAGLITKRTDP--LNQTLKY---QWDRLSRLKRLINENGASYEFVYD-AAGRL 915 Query: 296 ITQDPIGLKGGWNFYQY 312 + + I G Y Y Sbjct: 916 VKE--IDFDGKETVYAY 930 Score = 46.7 bits (109), Expect = 0.002, Method: Composition-based stats. Identities = 34/281 (12%), Positives = 74/281 (26%), Gaps = 35/281 (12%) Query: 7 IARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLV 66 + + YD G L + + E ++ YD+ L+ Sbjct: 986 LEEKQTEEFSYDGLGNLVQAKNA----------ETNLQWFYDAAGNLIKEHHQDVVTQKT 1035 Query: 67 E-SRYLYDPLGRRVA-------KRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQND 118 +++YD L R K W + V + D T+++ Sbjct: 1036 AVWKHVYDELNNRTTTIRPDGQKIDWLSYGSGHVYGMALNGEDVVSFERDDLHRETLRHY 1095 Query: 119 RTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLD 178 + L + +G Q ++ + +Q + + L Sbjct: 1096 ANGLSQQQSYDEVGRLTQQLMLSGHDKGYQAQTQNNAIQHTNQLIERLYHYDKTGELTLI 1155 Query: 179 RLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVST 238 + + R L + ++ N DP + Y+ + Sbjct: 1156 KDTRRGAIHYKYDPVGRLLEATSKLGKETFN-FDPASNILER---YNSTKEQSSQHISDE 1211 Query: 239 EG--------ATE-----WCAEYDEWGNLLNEENPHQLQQL 266 +G +YD +G L+ +++ L Sbjct: 1212 KGYGYNRLVNNIVQEYLDQQYQYDAFGQLIRQKSSQGDLNL 1252 >UniRef50_A9AE26 Rhs family protein n=10 Tax=cellular organisms RepID=A9AE26_BURM1 Length = 1547 Score = 232 bits (592), Expect = 2e-59, Method: Composition-based stats. Identities = 93/333 (27%), Positives = 127/333 (38%), Gaps = 78/333 (23%) Query: 4 DNRIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAE 63 N + A + YD G L K E Y +D+ +RL+ R Sbjct: 1160 GNLLKAYAGMHFEYDARGNLVRKRTPAGE----------QEYEWDAFNRLLSA-RVAETS 1208 Query: 64 PLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQ 123 E+RY YD GRR+AK V + T +GWDGD L Sbjct: 1209 RQSEARYFYDAFGRRIAKEV---------------NGERTVFGWDGDTLAYE-------- 1245 Query: 124 TIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESE 183 S GE G ++ P L + +E Sbjct: 1246 -----------------------------------SDGERGTHYIYEPGTFVPLAQYVAE 1270 Query: 184 ILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATE 243 + V E+ W +S E Q P K+ YHCD G P L +G Sbjct: 1271 PV---VGIETPEWKSSDRYVPEADPLQKVPQRRADAKLFYYHCDQIGTPQLLTDDDGDVV 1327 Query: 244 WCAEYDEWGNLLNEENPHQ------LQQLIRLPGQQYDEESGLYYNRHRYYDPLQGRYIT 297 W A Y WG + +R GQQ DEE+GL+YNR+RYYDP GR+++ Sbjct: 1328 WEASYKAWGEAREVIARASKAAGIVARNSLRFQGQQEDEETGLHYNRYRYYDPNSGRFVS 1387 Query: 298 QDPIGLKGGWNFYQYPLNPVQYIDSMGLASKYG 330 +DP+G+ GG N YQY N V ++D +GL + G Sbjct: 1388 KDPVGMVGGINVYQYAPNAVAWVDPLGLRKRIG 1420 Score = 71.4 bits (173), Expect = 6e-11, Method: Composition-based stats. Identities = 61/324 (18%), Positives = 100/324 (30%), Gaps = 64/324 (19%) Query: 3 PDNRIARDAH-----YLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYT 57 + R+ R Y YD GR+ + D + +T Y YD RL T Sbjct: 820 AEGRLLRHTDQLNRSTRYSYDAAGRIASRADAL---------GQTIAYRYDRLGRLTALT 870 Query: 58 RTQYAEPLVESRYLYDPLGRRVAK-------RVWRRERDLTGWMSLSRKPQVTWYGWDGD 110 +A ++ YDP GR + + ++ +++ +S+ VT D + Sbjct: 871 DANFA----TYQFHYDPAGRLIEEIGFDGKSTRYQYDKESGSLVSVDEAGCVTSVDLDAN 926 Query: 111 -RLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRS-----LADTLQQSGGEDG 164 RL + + + Y R + + R + + +++ + Sbjct: 927 GRLLKRASGESEERFAYD--------RSGRLIDAVNRYSRVQFFFDPVGNLVREHHAYNL 978 Query: 165 GSVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLY 224 V D L + R + WL V M D ++ Sbjct: 979 FGERRSYVWHHEYDELGNRRRTVRPDGHAIDWLMYGSGHVHGMLLDGD------ERVQFE 1032 Query: 225 HCD-HRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQ------LQQLIRL--PGQQ-- 273 D HR L S G YD G +L + +++ R GQ Sbjct: 1033 RDDLHRETVRMLSSKVGQ---RTHYDPAGRVLQQTIQRSSSPAPLVERRYRYDAAGQLSR 1089 Query: 274 -YDEESGLYYNRHRYYDPLQGRYI 296 D G R YDP GR I Sbjct: 1090 IEDSRKGGIDYR---YDP-VGRLI 1109 Score = 59.8 bits (143), Expect = 2e-07, Method: Composition-based stats. Identities = 52/262 (19%), Positives = 80/262 (30%), Gaps = 39/262 (14%) Query: 12 HYLYRYDRHGRLTEKTDLIPEGVIRTDDERTH-----------RYHYDSQHRLVHYTRTQ 60 +RYD GR+ E D V YD++ RL+ +T Sbjct: 772 KTEWRYDDIGRVVEAKDAAGGVVAYGYGPNGQLSEIRSPAGVEHVQYDAEGRLLRHTDQL 831 Query: 61 YAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRT 120 +RY YD GR ++ + + L R +T + Sbjct: 832 NRS----TRYSYDAAGRIASRADALGQTIAYRYDRLGRLTALT------------DANFA 875 Query: 121 RIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRL 180 Q Y P LI G+ + Q + +L + V ++L R Sbjct: 876 TYQFHYDPA--GRLIEEIGFDGKSTRYQYDKESGSLVSVDEAGCVTSVDLDANGRLLKRA 933 Query: 181 ESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEG 240 E + S R + + ++Q DPV R+ H Y+ L Sbjct: 934 SGESEERFAYDRSGRLIDAVNR-YSRVQFFFDPVGNLVREHHAYN---------LFGERR 983 Query: 241 ATEWCAEYDEWGNLLNEENPHQ 262 + W EYDE GN P Sbjct: 984 SYVWHHEYDELGNRRRTVRPDG 1005 Score = 53.7 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 67/337 (19%), Positives = 108/337 (32%), Gaps = 84/337 (24%) Query: 16 RYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYA------EPLVESR 69 +DRHGR+ + ++ +G RT Y YD+ LV + +R Sbjct: 512 EHDRHGRIVQIEQVLKDGERRTLAS----YEYDANGDLVRAVDRHGNARTYQYHRHLVTR 567 Query: 70 YLYDPLGRRVAKRVWRRERDLTGWMSLSRK-----PQVTWYGWDGD-RLTTIQNDRTRIQ 123 Y D GR ++ + + R+ W+ + RLT + + ++ Sbjct: 568 YT-DRTGRGMSLEWDGADAEDNADAKCIREYADDGSLDIRLAWNPNIRLTYVTDALGQMT 626 Query: 124 TIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESE 183 Y + R+ G + RR L +DG ++ E + Sbjct: 627 RYYF-NIHGYVYRIVYPDGN-QEWFRRDANHNLVLHIRQDGS-----------IEHREYD 673 Query: 184 ILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATE 243 + V E + G +E + D + + LV G Sbjct: 674 ARGNLVRHER-----ADGSIIEMAYDDKDQM------------------IRLVDPNGH-V 709 Query: 244 WCAEYDEWGNLLNEENPHQ-----LQQLIRLPGQQYDEESG---LYYNRH---------- 285 W +YD+ GNL+ E +P + LP Q D + G L YN Sbjct: 710 WQRKYDDAGNLVEEIDPLEHATKYAYNDKGLPTQITDAKGGTKTLEYNDAGQLTSYTDCS 769 Query: 286 ------RYYDPLQGRYI-TQDPIGLKGGWNFYQYPLN 315 RY D GR + +D GG Y Y N Sbjct: 770 GKKTEWRYDD--IGRVVEAKDA---AGGVVAYGYGPN 801 Score = 52.1 bits (123), Expect = 5e-05, Method: Composition-based stats. Identities = 63/416 (15%), Positives = 113/416 (27%), Gaps = 86/416 (20%) Query: 6 RIARDAHYL----YRYDRHGRLTEKTDLIPEGVIRTDD-ERTHRYH----------Y--- 47 ++ +D Y YD +G L D RY + Sbjct: 524 QVLKDGERRTLASYEYDANGDLVRAVDRHGNARTYQYHRHLVTRYTDRTGRGMSLEWDGA 583 Query: 48 DSQHRLVHYTRTQYA-----------EPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSL 96 D++ +YA P + Y+ D LG+ + + + Sbjct: 584 DAEDNADAKCIREYADDGSLDIRLAWNPNIRLTYVTDALGQMT---RYYFNIHGYVYRIV 640 Query: 97 SRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTL 156 W+ D + + + + + L+R E A G + + + Sbjct: 641 YPDGNQEWFRRDANHNLVLHIRQDGSIEHREYDARGNLVRHERADGSIIEMAYDDKDQMI 700 Query: 157 ---------QQSGGEDGGSVVF--PPVLVQMLDRLESEILADRVSEESRRWLASCGLTVE 205 Q +D G++V P+ + L ++++ Sbjct: 701 RLVDPNGHVWQRKYDDAGNLVEEIDPLEHATKYAYNDKGLPTQITDAKGGTKTLEYNDAG 760 Query: 206 QMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQ 265 Q+ + D + D G + G Y G L +P ++ Sbjct: 761 QLTSYTDCSGKKTEWRY----DDIGRVVEAKDAAGGVVA-YGYGPNGQLSEIRSPAGVEH 815 Query: 266 LIRLPGQQYDEESGLYYNR------HRY-YDPLQGRYITQ-DPIGLKGGWNFYQYPLNPV 317 + QYD E L + RY YD GR ++ D +G Y+Y Sbjct: 816 V------QYDAEGRLLRHTDQLNRSTRYSYD-AAGRIASRADALGQTI---AYRY----- 860 Query: 318 QYIDSMGLASKYGHLNNGGYGARPNKPPTPDPSKLPDIAKQLRLPYPIDQASSAPN 373 D +G + N Y D A +L D S+ Sbjct: 861 ---DRLGRLTALTDANFATY------------QFHYDPAGRLIEEIGFDGKSTRYQ 901 Score = 49.0 bits (115), Expect = 4e-04, Method: Composition-based stats. Identities = 45/296 (15%), Positives = 72/296 (24%), Gaps = 72/296 (24%) Query: 7 IARDAHYLYR-YDRHGRLTEKT------------DLIPEGVIRTDDERTHRYHYDSQHRL 53 I +D +R YD G L D + + + YD L Sbjct: 661 IRQDGSIEHREYDARGNLVRHERADGSIIEMAYDDKDQMIRLVDPNGHVWQRKYDDAGNL 720 Query: 54 VHYTRTQYAEPLVESRYLY----------DPLGRRVAKRVWRRERDLTGWMSLSRKPQVT 103 V ++Y Y D G + LT + S K Sbjct: 721 VEEIDPLEH----ATKYAYNDKGLPTQITDAKGG-TKTLEYNDAGQLTSYTDCSGKKTEW 775 Query: 104 WYGWDGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGED 163 Y G + + Y P L + + G + Q + L+ + + Sbjct: 776 RYDDIGRVVEAKDAAGGVVAYGYGPN--GQLSEIRSPAG-VEHVQYDAEGRLLRHTDQLN 832 Query: 164 GGSVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHL 223 + R+ + + + + Sbjct: 833 RST----------------------------RYSYDAAGRIASRADAL-------GQTIA 857 Query: 224 YHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEESG 279 Y D G AL + YD G L+ E QYD+ESG Sbjct: 858 YRYDRLGRLTALTDAN-FATYQFHYDPAGRLIEEIGFDGKSTRY-----QYDKESG 907 >UniRef50_P32109 Putative uncharacterized protein yibJ n=14 Tax=Bacteria RepID=YIBJ_ECOLI Length = 233 Score = 232 bits (592), Expect = 2e-59, Method: Composition-based stats. Identities = 139/151 (92%), Positives = 144/151 (95%) Query: 175 QMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLA 234 QMLDRLESEILADRVSEESRRWLASCGLTVEQM+NQMDPVYTPARKIHLYHCDHRGLPLA Sbjct: 2 QMLDRLESEILADRVSEESRRWLASCGLTVEQMKNQMDPVYTPARKIHLYHCDHRGLPLA 61 Query: 235 LVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEESGLYYNRHRYYDPLQGR 294 L+STEGAT WCAEYDEWGNLL++ENPH LQQLIRLPGQQYDEESGLYYNRHRYYDPL GR Sbjct: 62 LISTEGATAWCAEYDEWGNLLSDENPHHLQQLIRLPGQQYDEESGLYYNRHRYYDPLLGR 121 Query: 295 YITQDPIGLKGGWNFYQYPLNPVQYIDSMGL 325 YITQDPIGLKGGWNFYQYPLNPV +D GL Sbjct: 122 YITQDPIGLKGGWNFYQYPLNPVINVDPQGL 152 >UniRef50_A8A655 Rhs family protein n=14 Tax=Enterobacteriaceae RepID=A8A655_ECOHS Length = 314 Score = 231 bits (590), Expect = 3e-59, Method: Composition-based stats. Identities = 140/151 (92%), Positives = 145/151 (96%) Query: 175 QMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLA 234 QMLDRLESEILADRVSEESRRWLASCGLTVEQM+NQMDPVYTPARKIHLYHCDHRGLPLA Sbjct: 2 QMLDRLESEILADRVSEESRRWLASCGLTVEQMKNQMDPVYTPARKIHLYHCDHRGLPLA 61 Query: 235 LVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEESGLYYNRHRYYDPLQGR 294 L+STEGAT WCAEYDEWGNLL++ENPH LQQLIRLPGQQYDEESGLYYNRHRYYDPLQGR Sbjct: 62 LISTEGATAWCAEYDEWGNLLSDENPHHLQQLIRLPGQQYDEESGLYYNRHRYYDPLQGR 121 Query: 295 YITQDPIGLKGGWNFYQYPLNPVQYIDSMGL 325 YITQDPIGLKGGWNFYQYPLNPV +D GL Sbjct: 122 YITQDPIGLKGGWNFYQYPLNPVINVDPQGL 152 >UniRef50_C3JXH8 Putative Rhs protein n=1 Tax=Pseudomonas fluorescens SBW25 RepID=C3JXH8_PSEFS Length = 1597 Score = 229 bits (583), Expect = 2e-58, Method: Composition-based stats. Identities = 94/336 (27%), Positives = 134/336 (39%), Gaps = 40/336 (11%) Query: 14 LYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYLYD 73 Y++D GRL ++ EG + Y YD L T+ E Y YD Sbjct: 1122 TYQHDHQGRLFNQSIGDAEGPVYR-----RHYDYDKSGNLTRLLDTRKG----EHHYHYD 1172 Query: 74 PLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWD---GDRLTTIQNDRTRIQTIYQPGS 130 PL R + E++ G G D G+RL IQ D Y + Sbjct: 1173 PLSRLTRADHSQGEQERFGHDPAGNLLMQNRPGPDIVAGNRLM-IQGDHQ-----YDYDA 1226 Query: 131 FTPLIRVETATGELAKTQRRSLA-DTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRV 189 F LIR G T+ R L + +G + + R S+ + D Sbjct: 1227 FGNLIRERRGKGHRLVTEYRYDCQHRLIGTKKPNGQTASYRYDPF---GRRISKTVGDVT 1283 Query: 190 SEESRRWLASCGLTVEQMQNQMDPVYTPAR---------------KIHLYHCDHRGLPLA 234 +E W + + +Y P K + Y DH G P Sbjct: 1284 TEFF--WKGDTLIAEHHAERHRSYLYEPDSFRPLALLEGFGPKETKAYHYQLDHLGTPQE 1341 Query: 235 LVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEESGLYYNRHRYYDPLQGR 294 L + +G W A Y +G + + ++ +R GQ +D+ESGL+YNRHRYY P GR Sbjct: 1342 LTAADGEIVWSAHYRAYGEITRL-DIGKIDNPLRFQGQYFDQESGLHYNRHRYYHPDIGR 1400 Query: 295 YITQDPIGLKGGWNFYQYPLNPVQYIDSMGLASKYG 330 Y+T DP+ L GG N YQY NP ++D +GL+S G Sbjct: 1401 YLTPDPVKLTGGINAYQYVPNPTGWVDPLGLSSCPG 1436 Score = 64.8 bits (156), Expect = 6e-09, Method: Composition-based stats. Identities = 51/290 (17%), Positives = 84/290 (28%), Gaps = 59/290 (20%) Query: 6 RIARDAHYLYRYDRH--GRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAE 63 R+ R +++Y+R+ G + +TD D Y Y+ +LV ++ Sbjct: 774 RVVRRGEAVWKYERNDQGDVIRRTD---------PDGNATDYSYNKYGQLVGVWYPDHSC 824 Query: 64 PLVES-----------------RYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYG 106 + RY YD LGR++++ +T + Sbjct: 825 QTLVWNERGQLLEEQCPNGGIKRYRYDDLGRKISQE--------------DEHGALTQFE 870 Query: 107 W-DGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGG 165 W D RL I + Y + + G + + + + + DG Sbjct: 871 WNDVGRLVQIVLPSGDTRK-YTYNPYGKITSERDELGNITRYEYADGLHLISRRLNADGS 929 Query: 166 SVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYH 225 V + V RL + + V E R S GL Q + D T Y Sbjct: 930 QVNYRYDNV----RLLLTEIENEVGETYRLQYHSNGLI--QQETGFDGQRTA------YV 977 Query: 226 CDHRGLPLALV---STEGATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQ 272 D G E D G L+ + P Q Sbjct: 978 YDLNGNLQEKTEHGDDGSQLVTRYERDHAGRLVRKTLPDGNSVNYAYDRQ 1027 Score = 58.3 bits (139), Expect = 7e-07, Method: Composition-based stats. Identities = 49/283 (17%), Positives = 78/283 (27%), Gaps = 28/283 (9%) Query: 11 AHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRY 70 Y +Y +G + ++T D + Y YD L T + +RY Sbjct: 951 ETYRLQYHSNGLIQQETGF---------DGQRTAYVYDLNGNLQEKTEHGDDGSQLVTRY 1001 Query: 71 LYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVT------WYGWD-GDRLTTIQNDRTRIQ 123 D GR V K + + V Y +D +RLT ++ Sbjct: 1002 ERDHAGRLVRKTLPDGNSVNYAYDRQGNLLSVDDGNWFLAYEYDVQNRLTAEHQGWGTLR 1061 Query: 124 TIYQP-GSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLES 182 Y G T L + + L+ + +L S Sbjct: 1062 YGYDACGQLTNLRLPDNNRLTFNHDKGGHLSTVELNGAVLTSHQFNADREQQRTQGKLLS 1121 Query: 183 EILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKI------HLYHCDHRGLPLALV 236 D + + V + D R + H YH D Sbjct: 1122 TYQHDHQGRLFNQSIGDAEGPVYRRHYDYDKSGNLTRLLDTRKGEHHYHYDPLSRLTRAD 1181 Query: 237 STEGATEWCAEYDEWGNLLNEENPHQ---LQQLIRLPG-QQYD 275 ++G +D GNLL + P + + G QYD Sbjct: 1182 HSQGEQ-ERFGHDPAGNLLMQNRPGPDIVAGNRLMIQGDHQYD 1223 Score = 55.2 bits (131), Expect = 5e-06, Method: Composition-based stats. Identities = 50/328 (15%), Positives = 96/328 (29%), Gaps = 63/328 (19%) Query: 15 YRYDRHGRLTEKTDLIPEGVIRTDDER------------THRYHYDSQHRLVHYTRTQYA 62 Y YD GRL T+ + E + DE+ + + ++ + R + Sbjct: 616 YAYDGAGRLVSATNAVGESEVYRYDEQHVILERGLAGGASFYWEWEQAGKAARCVRHWAS 675 Query: 63 EPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDG----------DRL 112 +++RY +D G+ V+ + ++ R V DG RL Sbjct: 676 FSQMDTRYAWDDNGQVT---VFNADGSQEIYVHDQRARLVQRVDPDGAEHFKSYDEKGRL 732 Query: 113 TTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRS-------LADTLQQSGGEDGG 165 T Q+ ++ YQ L+ + E + + + + + D G Sbjct: 733 TVEQDPLGAVK-AYQYDDAARLVALFPGEDEPTTYEHDNGFVRVVRRGEAVWKYERNDQG 791 Query: 166 SVVFPPVLVQMLDRLESEILADRVSEESRRWL--ASCGLTVEQMQNQMDPVYTPARKIHL 223 V+ D ++ ++ + W SC V + Q+ P I Sbjct: 792 DVIRRTDP----DGNATDYSYNKYGQLVGVWYPDHSCQTLVWNERGQLLEEQCPNGGIKR 847 Query: 224 YHCDHRGLPLALVSTEGATEW--------------------CAEYDEWGNLLNEENPHQL 263 Y D G ++ GA Y+ +G + +E + Sbjct: 848 YRYDDLGRKISQEDEHGALTQFEWNDVGRLVQIVLPSGDTRKYTYNPYGKITSERDELGN 907 Query: 264 QQLIRLPGQQYDEESGLY----YNRHRY 287 + L +RY Sbjct: 908 ITRYEYADGLHLISRRLNADGSQVNYRY 935 Score = 53.7 bits (127), Expect = 2e-05, Method: Composition-based stats. Identities = 52/316 (16%), Positives = 97/316 (30%), Gaps = 31/316 (9%) Query: 4 DNRIARDAHYLYRYDRHGRLTEKTDLIPEGV-IRTDDERTHRYHYDSQHRLVHYTRTQYA 62 DNR+ +L GR+ + + + +R R Y R+V + Sbjct: 556 DNRLRIARDFL------GRIERLDNGVGRSLFLRYASGRIVAVDY-QIQRIVDEGPYVWV 608 Query: 63 EPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQV-----TWYGWDGDRLTTIQN 117 Y YD GR V+ E ++ + + + W+ ++ Sbjct: 609 TEQTVVSYAYDGAGRLVSATNAVGESEVYRYDEQHVILERGLAGGASFYWEWEQAGKAAR 668 Query: 118 --------DRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVF 169 + + + + + + QR L + G E S Sbjct: 669 CVRHWASFSQMDTRYAWDDNGQVTVFNADGSQEIYVHDQRARLVQRVDPDGAEHFKSYDE 728 Query: 170 PPVLVQMLDRLES--EILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCD 227 L D L + D + + T + N V + Y + Sbjct: 729 KGRLTVEQDPLGAVKAYQYDDAARLVALFPGEDEPTTYEHDNGFVRVVRRGEAVWKYERN 788 Query: 228 HRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRLP--GQQYDEE--SGLYYN 283 +G + +G Y+++G L+ P Q + GQ +E+ +G Sbjct: 789 DQGDVIRRTDPDGNAT-DYSYNKYGQLVGVWYPDHSCQTLVWNERGQLLEEQCPNG-GIK 846 Query: 284 RHRYYDPLQGRYITQD 299 R+RY D GR I+Q+ Sbjct: 847 RYRYDD--LGRKISQE 860 >UniRef50_Q147B5 Rhs family protein n=2 Tax=Betaproteobacteria RepID=Q147B5_BURXL Length = 1362 Score = 228 bits (581), Expect = 3e-58, Method: Composition-based stats. Identities = 115/430 (26%), Positives = 157/430 (36%), Gaps = 49/430 (11%) Query: 12 HYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRT----QYAEPLVE 67 YRYD G + E TD HRY YD +L+ A +++ Sbjct: 943 SRTYRYDEVGNVREMTDR---------QSGVHRYRYDPLGQLIESEHETFALDPAHNILD 993 Query: 68 SRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQ 127 SR L +G RV + Y G+ + I TRI+ Y Sbjct: 994 SRDLSPVVGNRV----------------MQFGQHRYVYDMHGNVVEKISGAHTRIRLDYS 1037 Query: 128 PGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILAD 187 P RV E G ++ V +RL SE+ D Sbjct: 1038 PAHRIERARVARNGTEERVEYGYDALGRRVFRKNASGITL-----FVWEGNRLLSEVRDD 1092 Query: 188 RVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWCAE 247 R + + + +N + I YH D GLP G T+W A Sbjct: 1093 RTFVYVYAHNSFVPVAQIESRNAQNGRARDDLPIRYYHTDQIGLPYESTDDAGRTQWRAR 1152 Query: 248 YDEWGNLLNEENPH--------QLQQLIRLPGQQYDEESGLYYNRHRYYDPLQGRYITQD 299 Y WG LL H Q Q +R GQ +DEE+GL+YNRHRYYDP GR++TQD Sbjct: 1153 YAAWGRLLGANGGHEQMHESGRQAHQPLRFQGQYFDEETGLHYNRHRYYDPDAGRFMTQD 1212 Query: 300 PIGLKGGWNFYQYPLNPVQYIDSMGLASKYGHLNNGGYGARPNKPPTPDPSKLPDIAKQL 359 PIGL+GG N Y+Y NP ++ID +GLA + G N P+ ++ Sbjct: 1213 PIGLRGGINLYRYAPNPGRWIDPLGLAVDLSLV---GPHYACNLNNFPNTFQVLGHGSPG 1269 Query: 360 RLPYPIDQASSAPNVFKTFFRALSPY----DYTLYCRKWVKPNLTCTPQDDSQYPGMDTK 415 + + P+ + R S Y TLY Q S Y G D Sbjct: 1270 GNIADLSGETLTPSELGDYMREASNYRQGQPVTLYACHLGAGGKNSYAQQLSNYLGADVN 1329 Query: 416 TASDYLPQTN 425 +D L + Sbjct: 1330 APTDVLKTID 1339 Score = 62.5 bits (150), Expect = 4e-08, Method: Composition-based stats. Identities = 47/283 (16%), Positives = 80/283 (28%), Gaps = 41/283 (14%) Query: 9 RDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVH----------YTR 58 A Y + YD GRL E+ D R RY YD+ L Sbjct: 721 NGAPYRFTYDTAGRLVEQQGF---------DGRLIRYRYDAAGWLTEQIELGAYEDHAAA 771 Query: 59 TQYAEPLVESRYLYDPLGR------------RVAKRVWRRERDLTGWMSLSRKPQVTW-Y 105 + + Y D GR R + WR + + + ++ Y Sbjct: 772 DGNHPDTLRTTYERDKAGRITATTISRAGDERTERITWRYDAAGRLIEASNDCCRLERGY 831 Query: 106 GWDGDRLTTIQN--DRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGED 163 G RL++ + + Y+ + IR G Q S + Sbjct: 832 DAVG-RLSSETSHVAGRSLTVSYEHDALGNHIRTTLPDGRHIDYLYYGSGHLHQISIDGE 890 Query: 164 GGSVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHL 223 S + L + + R + E+++ + R + G T + + Sbjct: 891 VISDIERDALHREVSRTQGELVSHYQYDLQGRHI---GQQTMGRAVSGHSAITLISRTYR 947 Query: 224 YHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQL 266 Y D G + + YD G L+ E+ Sbjct: 948 Y--DEVGNVREMTDRQSGVH-RYRYDPLGQLIESEHETFALDP 987 Score = 61.7 bits (148), Expect = 5e-08, Method: Composition-based stats. Identities = 53/286 (18%), Positives = 72/286 (25%), Gaps = 49/286 (17%) Query: 8 ARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVE 67 A A YD G L +T+ + Y YD R++ T Sbjct: 552 AMGAATRVAYDAAGNLIRRTNAL---------GHVTGYAYDDDGRVIRITDAHGKHR--- 599 Query: 68 SRYLYDPLGRRVAKRVWRRERDLTGWMSLSR-------KPQVTWYGWD--GDRLTTIQND 118 + YD GR + GW + T Y + G L T D Sbjct: 600 -HFAYDVHGRLTSHIDCSGRATHYGWDDWGHLALVTNAAGETTRYWRNRRGRLLRTRHAD 658 Query: 119 RTRIQTIYQ--------PGSFTPLIRVETATGELAKT----------QRRSLADTLQQSG 160 T + Y + + E A L T A LQ Sbjct: 659 GTGEEFTYDIHGRLIAHTDAHGASTQWERAADGLPVTRIDALGHCLRYEYDAARRLQTLT 718 Query: 161 GEDGGSVVFPPVLVQMLDRLES-EILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPAR 219 E+G F L + + R ++ WL + P Sbjct: 719 NENGAPYRFTYDTAGRLVEQQGFDGRLIRYRYDAAGWLTEQIELGAYEDHAAADGNHPDT 778 Query: 220 KIHLYHCDHRGLPLALV-STEG-----ATEWCAEYDEWGNLLNEEN 259 Y D G A S G W YD G L+ N Sbjct: 779 LRTTYERDKAGRITATTISRAGDERTERITWR--YDAAGRLIEASN 822 Score = 59.8 bits (143), Expect = 2e-07, Method: Composition-based stats. Identities = 72/416 (17%), Positives = 122/416 (29%), Gaps = 57/416 (13%) Query: 3 PDNRIARDAH-YLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQY 61 P RI H Y YD RL T+ ++ +R+ YD+ RLV Q Sbjct: 693 PVTRIDALGHCLRYEYDAARRLQTLTN---------ENGAPYRFTYDTAGRLVE----QQ 739 Query: 62 AEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWD--GDRLTTIQNDR 119 RY YD G + D T Y D G T + Sbjct: 740 GFDGRLIRYRYDAAGWLTEQIELGAYEDHAAADGNHPDTLRTTYERDKAGRITATTISRA 799 Query: 120 TRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDR 179 +T + R+ A+ + + +R D + + E + D Sbjct: 800 GDERTERITWRYDAAGRLIEASNDCCRLERGY--DAVGRLSSETSHVAGRSLTVSYEHDA 857 Query: 180 LESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTE 239 L + I +L + Q+ + + R + T+ Sbjct: 858 LGNHIRTTLPDGRHIDYLYYGSGHLHQISIDGEVISDIERDALH---------REVSRTQ 908 Query: 240 GATEWCAEYDEWGNLLNEENPHQ----------LQQLIRL-----PGQQYDEESGLYYNR 284 G +YD G + ++ + + + R + D +SG++ R Sbjct: 909 GELVSHYQYDLQGRHIGQQTMGRAVSGHSAITLISRTYRYDEVGNVREMTDRQSGVH--R 966 Query: 285 HRYYDPLQGRYITQDPIGLKGGWNFYQYPLNPVQYI-DSMGLASKYGH-LNNGGYGARPN 342 +RY DP+G + L+P I DS L+ G+ + G Sbjct: 967 YRY-----------DPLGQLIESEHETFALDPAHNILDSRDLSPVVGNRVMQFGQHRYVY 1015 Query: 343 KPPTPDPSKLPDIAKQLRLPYPIDQASSAPNVFKTFFRALSPYDYTLYCRKWVKPN 398 K+ ++RL Y V + Y Y R+ + N Sbjct: 1016 DMHGNVVEKISGAHTRIRLDYSPAHRIERARVARNGTEERVEYGYDALGRRVFRKN 1071 Score = 55.2 bits (131), Expect = 5e-06, Method: Composition-based stats. Identities = 43/268 (16%), Positives = 68/268 (25%), Gaps = 39/268 (14%) Query: 17 YDRHGRLTEKTDLIPEGVIRTDDERTH-------------RYHYDSQHRLVHYTRTQYAE 63 YD G +T TD + R YD+ L+ T Sbjct: 518 YDARGNMTSLTDAAGRRTEIQYHPQWQRPTLIVDAMGAATRVAYDAAGNLIRRTNALGH- 576 Query: 64 PLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSR-------KPQVTWYGWDGDRLTTIQ 116 + Y YD GR + + + R + T YGWD + Sbjct: 577 ---VTGYAYDDDGRVIRITDAHGKHRHFAYDVHGRLTSHIDCSGRATHYGWDDWGHLALV 633 Query: 117 NDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQM 176 + T Y L+R A G + + L G S + Sbjct: 634 TNAAGETTRYWRNRRGRLLRTRHADG-TGEEFTYDIHGRLIAHTDAHGASTQW------- 685 Query: 177 LDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALV 236 E AD + L C ++ + + + D G + Sbjct: 686 ------ERAADGLPVTRIDALGHCLRYEYDAARRLQTLTNENGAPYRFTYDTAGRLVEQQ 739 Query: 237 STEGATEWCAEYDEWGNLLNEENPHQLQ 264 +G YD G L + + Sbjct: 740 GFDGRLI-RYRYDAAGWLTEQIELGAYE 766 Score = 54.0 bits (128), Expect = 1e-05, Method: Composition-based stats. Identities = 46/304 (15%), Positives = 80/304 (26%), Gaps = 46/304 (15%) Query: 4 DNRIARDAH-----YLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDS--------- 49 D R+ R + YD HGRLT D R Y +D Sbjct: 585 DGRVIRITDAHGKHRHFAYDVHGRLTSHIDC---------SGRATHYGWDDWGHLALVTN 635 Query: 50 ---------QHRLVHYTRTQYAEPLVESRYLYDPLGRRVAK-------RVWRRERDLTGW 93 ++R RT++A+ E + YD GR +A W R D Sbjct: 636 AAGETTRYWRNRRGRLLRTRHADGTGEE-FTYDIHGRLIAHTDAHGASTQWERAADGLPV 694 Query: 94 MSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLA 153 + Y +D R + + + L+ + G L + + + Sbjct: 695 TRIDALGHCLRYEYDAARRLQTLTNENGAPYRFTYDTAGRLVEQQGFDGRLIRYRYDAAG 754 Query: 154 DTLQQS--GGEDGGSVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQM 211 +Q G + + + E + + R + + Sbjct: 755 WLTEQIELGAYEDHAAADGNHPDTLRTTYERDKAGRITATTISRAGDERTERITWRYDAA 814 Query: 212 DPVYTPARKIHLYH--CDHRGLPLALVS--TEGATEWCAEYDEWGNLLNEENPHQLQQLI 267 + + D G + S + E+D GN + P Sbjct: 815 GRLIEASNDCCRLERGYDAVGRLSSETSHVAGRSLTVSYEHDALGNHIRTTLPDGRHIDY 874 Query: 268 RLPG 271 G Sbjct: 875 LYYG 878 Score = 42.9 bits (99), Expect = 0.024, Method: Composition-based stats. Identities = 52/305 (17%), Positives = 80/305 (26%), Gaps = 51/305 (16%) Query: 18 DRHGRLTEKTDLIPEGVIRTDD--ERTHRYHYDSQHRLVHYTRTQYAEPLVESRYLYDPL 75 D G T +R D YD++ + T D Sbjct: 487 DAAGNATRIDVDGQGNPLRVTDPAGGVRLATYDARGNMTSLT---------------DAA 531 Query: 76 GRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQPGSFTPLI 135 GRR + + + T + Y G+ + Y +I Sbjct: 532 GRRTEIQYHPQWQRPTLIVDAMGAATRVAYDAAGNLIRRTNALGHVTGYAYDDD--GRVI 589 Query: 136 RVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSEESRR 195 R+ A G+ + L G + + L ++ + E +R Sbjct: 590 RITDAHGKHRHF-AYDVHGRLTSHIDCSGRATHYGWDDWGHLA-----LVTNAAGETTRY 643 Query: 196 WLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGA-TEWCAEYDEWGNL 254 W G + + D G +A GA T+W D Sbjct: 644 WRNRRGRLLRTRHADG-----TGEEFTY---DIHGRLIAHTDAHGASTQWERAAD----G 691 Query: 255 LNEENPHQLQQLIRLPGQQYDEESGL----YYNRHRY---YDPLQGRYITQDPIGLKGGW 307 L L +R +YD L N Y YD GR + Q G G Sbjct: 692 LPVTRIDALGHCLRY---EYDAARRLQTLTNENGAPYRFTYD-TAGRLVEQ--QGFDGRL 745 Query: 308 NFYQY 312 Y+Y Sbjct: 746 IRYRY 750 >UniRef50_Q6D1M4 Rhs protein n=5 Tax=Enterobacteriaceae RepID=Q6D1M4_ERWCT Length = 1618 Score = 227 bits (579), Expect = 6e-58, Method: Composition-based stats. Identities = 102/424 (24%), Positives = 157/424 (37%), Gaps = 74/424 (17%) Query: 3 PDNRIARDAHYLYRYDRHGRLTEKTDLI------------PEGVIRTDDERTHR---YHY 47 D R+ Y+YD RLT TD R D+ R + + Y Sbjct: 1157 ADGRVNDVLERRYQYDVLDRLTGITDSHWGEQAFRLNGAGQMTAERRDEGRRRQARLFGY 1216 Query: 48 DSQHRLVHYTRTQYA--------EPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSR- 98 DS+ L ++ + +V+S YD GR + + + D G +++ R Sbjct: 1217 DSEQNLCEVSQIAPGLDETLKVQDAVVQSSARYDAAGRVIERGHTQYRYDDCGRLAMKRE 1276 Query: 99 -----KPQVTWYGWD-GDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSL 152 +P+ T++ WD DRL + + Y+ +F R + Sbjct: 1277 TRPGFRPKETYFDWDVQDRLVRVSLPDGA-RWRYRYDAFGR---------------RINK 1320 Query: 153 ADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSEESRRWLASCG--LTVEQMQNQ 210 Q + V + Q++ + + AD + +W+ G + Q++ Q Sbjct: 1321 VREGQVPSAQAVARVAYRWDGDQLIG--QHQYRADGSAAREVQWVYEPGSFRPLAQLEAQ 1378 Query: 211 MDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENP---------- 260 D + ++H D G L S EG W E WG E P Sbjct: 1379 GD-----STQLHYIVTDLTGTARELCSEEGEIRWRGEQGLWGAHREERRPIPLRRYLGDA 1433 Query: 261 --HQLQQLIRLPGQQYDEESGLYYNRHRYYDPLQGRYITQDPIGLKGGWNFYQYPLNPVQ 318 ++ +R GQ YD E+GLYYNRHRYYD G+Y++ DPIGL GG Y Y NP+ Sbjct: 1434 ANEEVYCELRYQGQLYDAETGLYYNRHRYYDAESGQYLSPDPIGLAGGKRAYGYVKNPLS 1493 Query: 319 YIDSMGLASKYGHLNNGGYGARPNKPPTPDPSKLPDIAKQLRLPYPIDQASSAPNVFKTF 378 ++D +GL K G NG K + + DI P P K Sbjct: 1494 WVDPLGLTPKEG--KNGSDKGPDKKNSRAKINNIEDI-----FDNPDVLKGHTPESLKEE 1546 Query: 379 FRAL 382 + Sbjct: 1547 LGGI 1550 Score = 62.5 bits (150), Expect = 4e-08, Method: Composition-based stats. Identities = 53/286 (18%), Positives = 83/286 (29%), Gaps = 41/286 (14%) Query: 9 RDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVES 68 + + Y +D GRL+E R D R +RY YD RLV T + Sbjct: 966 QGRDWTYGFDHSGRLSE---------ERHYDGRVYRYRYDVADRLVQRTAPDGS----AL 1012 Query: 69 RYLYDPLGR--RVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTIY 126 Y +D GR R+ R E D + RLT + ++ +Y Sbjct: 1013 HYEHDTAGRITRITARRADGETDGITELEYDVAG----------RLTQAASPDAVVEYVY 1062 Query: 127 QPGSFT--PLIRVETATGELAKTQRRSLADTL--------QQSGGEDGGSVVFPPVLVQM 176 + E +R++ D + Q G P+ Sbjct: 1063 NRAGQVTSETVNGEAVQSGYDAGGQRAIVDGILAPLQLAWQSGRLSSLGIGSHQPLQFSH 1122 Query: 177 LDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALV 236 E + ++ R + GL Q D + Y D + Sbjct: 1123 TAAGEEQRRSNGSGFALRHEWSPTGLLQRQALEGADGRVNDVLERR-YQYDVLDRLTGIT 1181 Query: 237 STE-GATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEESGLY 281 + G + G + E ++ RL G YD E L Sbjct: 1182 DSHWGEQAFRLNGA--GQMTAERRDEGRRRQARLFG--YDSEQNLC 1223 Score = 58.7 bits (140), Expect = 5e-07, Method: Composition-based stats. Identities = 51/280 (18%), Positives = 88/280 (31%), Gaps = 36/280 (12%) Query: 2 WPDNRIAR-----DAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHY 56 W DN++ Y+ + G++TE + D TH+Y YD +L+ Y Sbjct: 740 WVDNQLVAETDPLGGRTAYQRNDWGQVTE---------VALPDGATHQYAYDENGQLLAY 790 Query: 57 TRTQYAEPLVESRYLYDPLGRRVAK-----RVWRRERDLTGWMSLSRKPQVTWYGWDGDR 111 T + E Y + G+ V R W TG ++ P + +R Sbjct: 791 TDPLCS----EWHYQRNAAGQVVEVNDPEGREWLYSYGETGQLATVIGPDGVLQRYHYNR 846 Query: 112 --LTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVF 169 L + + +++ L E G A Q R + E VV+ Sbjct: 847 RGLLSSLERDNALPVMFRYDDLDRLT--ERHIGHEAGVQVRRWEYDCVR---ESPSKVVY 901 Query: 170 PPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHR 229 L +R+ G + + DP+ R YH + Sbjct: 902 EDGSETQFGYDVEGNLTAVTDALGQRYQFRYG-AFDNLLEATDPLGATVR----YHYNAE 956 Query: 230 GLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRL 269 + +++G +W +D G L E + R Sbjct: 957 AEFAGVTNSQGR-DWTYGFDHSGRLSEERHYDGRVYRYRY 995 Score = 57.5 bits (137), Expect = 1e-06, Method: Composition-based stats. Identities = 52/280 (18%), Positives = 80/280 (28%), Gaps = 47/280 (16%) Query: 3 PDNRIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYA 62 PDNR+ + R T L R + Y YDS L+ + Sbjct: 599 PDNRLIHVETHRQR---------ITCLTLCDTHRKPLKTLASYTYDSLGHLLSVRADEGR 649 Query: 63 EPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRI 122 Y Y P G W+ +TW D D+ + DRT Sbjct: 650 N----FDYRYSPEG----------------WLLRWSDLALTWVEHDYDKKGRVIRDRTS- 688 Query: 123 QTIYQPGSFTPLIRVETATGELAK----TQRRSLADTLQQSGGEDGGSVVFPPVLVQMLD 178 Y PG F T+ + R + + DGG +F V Q++ Sbjct: 689 -EGYWPGRFEYDDDTLTSHYYSGFGGVISYVRDERNNILLKRTPDGGETLFEWVDNQLV- 746 Query: 179 RLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHL---------YHCDHR 229 E++ L R + + W + + + + Y + Sbjct: 747 -AETDPLGGRTAYQRNDWGQVTEVALPDGATHQYAYDENGQLLAYTDPLCSEWHYQRNAA 805 Query: 230 GLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRL 269 G + + EG W Y E G L P + Q Sbjct: 806 GQVVEVNDPEGRE-WLYSYGETGQLATVIGPDGVLQRYHY 844 Score = 47.5 bits (111), Expect = 0.001, Method: Composition-based stats. Identities = 35/212 (16%), Positives = 64/212 (30%), Gaps = 34/212 (16%) Query: 15 YRYDRHGRLTEKTDLIPEGV----------------IRTDDERTHRYHYDSQHRLVHYTR 58 +RYD RLTE+ GV + +D ++ YD + L T Sbjct: 863 FRYDDLDRLTERHIGHEAGVQVRRWEYDCVRESPSKVVYEDGSETQFGYDVEGNLTAVTD 922 Query: 59 TQYAEPLVESRYLY----------DPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWD 108 ++ Y DPLG + + E + G + + + Sbjct: 923 ALG----QRYQFRYGAFDNLLEATDPLG-ATVRYHYNAEAEFAGVTNSQGRDWTYGFDHS 977 Query: 109 GDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQ-QSGGEDGGSV 167 G RL+ ++ R+ Y+ L++ G + + + + DG + Sbjct: 978 G-RLSEERHYDGRV-YRYRYDVADRLVQRTAPDGSALHYEHDTAGRITRITARRADGETD 1035 Query: 168 VFPPVLVQMLDRLESEILADRVSEESRRWLAS 199 + + RL D V E Sbjct: 1036 GITELEYDVAGRLTQAASPDAVVEYVYNRAGQ 1067 >UniRef50_D1VCV7 YD repeat protein n=1 Tax=Frankia sp. EuI1c RepID=D1VCV7_9ACTO Length = 1572 Score = 226 bits (577), Expect = 1e-57, Method: Composition-based stats. Identities = 90/393 (22%), Positives = 128/393 (32%), Gaps = 89/393 (22%) Query: 4 DNRIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAE 63 I + Y +D GR+ + L P G RY +D+ L T Sbjct: 1194 GTLIRQAGKTRYEHDAQGRIILRRQLRPAGETDD-----WRYTWDADDHLTAVTTPDG-- 1246 Query: 64 PLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQ------- 116 +Y YD GRR+AK+ D+ + + WDG L Sbjct: 1247 --TVWQYRYDAFGRRIAKQRLSSAGDIV---------EQITFVWDGLVLAEQHHTVQAEP 1295 Query: 117 ------NDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFP 170 + T ++P +F PL + E + S Sbjct: 1296 GETAGPSTTTVTTWDWEPNTFRPLTQSERRPTGDQASSANS------------------- 1336 Query: 171 PVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRG 230 R + + W + + H D G Sbjct: 1337 -----------------RPDDPDQAWYDT--------------------QFHAIVTDLIG 1359 Query: 231 LPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEESGLYYNRHRYYDP 290 P LV +G W + WG + P +R PGQ +D E+GL YN HRYYDP Sbjct: 1360 TPTELVDPDGRLAWHSRATLWG-VSPPSTPTTTDCPLRFPGQYHDPETGLNYNFHRYYDP 1418 Query: 291 LQGRYITQDPIGLKGGWNFYQYPLNPVQYIDSMGLASKYGHLNNGGYGARPNKPP-TPDP 349 RY T D +GL N + Y NP+ +ID GLA L+ G P P D Sbjct: 1419 ATARYKTSDALGLSPAPNPWTYVTNPLTWIDPFGLAPCKDLLHAFGNAQGPRAPRLGKDF 1478 Query: 350 SKLPDIAKQLRLPYPIDQASSAPNVFKTFFRAL 382 PD + P + AS+ +V K R + Sbjct: 1479 DIGPDGMIIPQEPPEVKGASTFADVTKVPVRGI 1511 Score = 75.2 bits (183), Expect = 5e-12, Method: Composition-based stats. Identities = 60/327 (18%), Positives = 89/327 (27%), Gaps = 71/327 (21%) Query: 14 LYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYLYD 73 Y YD G+LT+ + R R+ YD R+V + E RY YD Sbjct: 569 RYGYDATGQLTQVVNS---------SGRALRFDYDPDGRIVRWLDRNG----TEYRYTYD 615 Query: 74 PLGRRV-----------------AKRVWRRERDLTGWMSLSRK------------PQVTW 104 GR V + V L + +VT Sbjct: 616 ATGRVVRTAGSDDYLAGTLAYDDERHVTTETNSLGHVTAHHFTDRLRPARHVDPLGRVTA 675 Query: 105 YGWDGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDG 164 +GWD T D Y+ L+ VE G T + L Sbjct: 676 FGWDRFDNRTEVTDPLGRTIRYRYDDIGNLVTVERPDGTQTTTTWNAQRRPLVSVDANGA 735 Query: 165 G-SVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHL 223 + + D V ++ R +A + Q + Sbjct: 736 RWEREYDTRGNLAAVVDPTGGRTDLVHDDRGRLIALTDALGQLTQVE------------- 782 Query: 224 YHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRLP--GQQY-----DE 276 D GLP+A++ GA + D G ++ +P + G D Sbjct: 783 --TDAAGLPIAVIDPAGAVT-SWDRDALGRVVATTDPLGGVTRLSWTPEGHLTSRGRPDG 839 Query: 277 ESGLYYNRHRYYDPLQGRYITQDPIGL 303 + Y YDP DP G Sbjct: 840 ATDTYR-----YDPEGNLVEQVDPAGF 861 Score = 62.5 bits (150), Expect = 3e-08, Method: Composition-based stats. Identities = 58/296 (19%), Positives = 84/296 (28%), Gaps = 52/296 (17%) Query: 9 RDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQY------- 61 + + Y YD G+L +TD D RT RY YD+ +LV T Sbjct: 901 QGLRWSYEYDAAGQLVAETDF---------DGRTIRYDYDAAGQLVGRTNGAGETVTFAR 951 Query: 62 ---------AEPLVESRYLYDPLGRRVAKR-------VWRRERDLTGWMSLSRKPQVTWY 105 + P S + YD GR V V R + + Y Sbjct: 952 DSGGDIVARSGPDGTSTFAYDATGRVVRATSPDAEVLVERDLLGRVTAEICDGRRLASRY 1011 Query: 106 GWDGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGED-- 163 G R + P PL G+L + L++ D Sbjct: 1012 DPLGHRTRRTTPSGAISSWEHDPAG-RPLA--LRTAGQLLTFTHDAAGHELERHLVRDAP 1068 Query: 164 GGSVVFPPVLVQMLDRLESEILADRVSEESRRWLASC---GLTVEQMQNQMDPVYTPARK 220 GG+ V D+L S+ L G ++ + D YT Sbjct: 1069 GGAEVVLTQRWDARDQLRSQALVVGPGPAGPGPAGLGQPAGAGTARLLQRRDFAYTSDGY 1128 Query: 221 ----------IHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQL 266 +H + D A+ GA YD GNL + P + Sbjct: 1129 LAETDDLLAGVHHFELDAMRRVTAV--RGGAWAERYAYDPAGNLTHAAWPASVDPD 1182 Score = 55.6 bits (132), Expect = 4e-06, Method: Composition-based stats. Identities = 44/274 (16%), Positives = 77/274 (28%), Gaps = 28/274 (10%) Query: 15 YRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRY---- 70 + +DR TE TD + RT RY YD LV R + Sbjct: 676 FGWDRFDNRTEVTDPL---------GRTIRYRYDDIGNLVTVERPDGTQTTTTWNAQRRP 726 Query: 71 --LYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQP 128 D G R + R + D RL + + ++ + Sbjct: 727 LVSVDANGARWEREYDTRGNLAAVVDPTGGR--TDLVHDDRGRLIALTDALGQLTQVETD 784 Query: 129 GSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADR 188 + P+ ++ G + R +L + + G + + + R + D Sbjct: 785 AAGLPIAVID-PAGAVTSWDRDALGRVVATTDPLGGVTRLSWTPEGHLTSRGRPDGATDT 843 Query: 189 VSEESR----RWLASCGLTVEQMQNQMDP---VYTPARKIHLYHCDHRGLPLALVSTEGA 241 + + G T D +P + D ++ + +G Sbjct: 844 YRYDPEGNLVEQVDPAGFTTRTEYTHFDLPTVRTSPDGSRMAFGYDTELRLTSVTNPQG- 902 Query: 242 TEWCAEYDEWGNLLNEENPHQLQQLIRL--PGQQ 273 W EYD G L+ E + GQ Sbjct: 903 LRWSYEYDAAGQLVAETDFDGRTIRYDYDAAGQL 936 Score = 53.7 bits (127), Expect = 2e-05, Method: Composition-based stats. Identities = 51/312 (16%), Positives = 82/312 (26%), Gaps = 67/312 (21%) Query: 6 RIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTD----------DERTHRYHYDSQHRLVH 55 R D + YD GR+ T E ++ D D R YD Sbjct: 960 RSGPDGTSTFAYDATGRVVRATSPDAEVLVERDLLGRVTAEICDGRRLASRYDPLGHRTR 1019 Query: 56 YTRTQYAEPLVESRYLYDPLGR----RVAKRVWRRERDLTG--------WMSLSRKPQVT 103 T A S + +DP GR R A ++ D G + V Sbjct: 1020 RTTPSGA----ISSWEHDPAGRPLALRTAGQLLTFTHDAAGHELERHLVRDAPGGAEVVL 1075 Query: 104 WYGWDG-DRL----------------------TTIQNDRTRIQTIYQPGSFTPLIRVETA 140 WD D+L R + + S L + Sbjct: 1076 TQRWDARDQLRSQALVVGPGPAGPGPAGLGQPAGAGTARLLQRRDFAYTSDGYLAETDDL 1135 Query: 141 TGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSEESRRWLA-- 198 + + ++ GG + P + + D E+ R Sbjct: 1136 LAGVHHFELDAMRRVTAVRGGAWAERYAYDPAGNLTHAAWPASVDPDTADEQGERGYDGT 1195 Query: 199 ---SCGLTVEQMQNQMDPV---------YTPARKIHLYHCDHRGLPLALVSTEGATEWCA 246 G T + Q + T + DH A+ + +G T W Sbjct: 1196 LIRQAGKTRYEHDAQGRIILRRQLRPAGETDDWRYTWDADDHL---TAVTTPDG-TVWQY 1251 Query: 247 EYDEWGNLLNEE 258 YD +G + ++ Sbjct: 1252 RYDAFGRRIAKQ 1263 Score = 53.3 bits (126), Expect = 2e-05, Method: Composition-based stats. Identities = 43/259 (16%), Positives = 73/259 (28%), Gaps = 29/259 (11%) Query: 18 DRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYLYDPLGR 77 D GR+ TD + R + + L R A Y YDP G Sbjct: 805 DALGRVVATTDPL---------GGVTRLSWTPEGHLTSRGRPDGATD----TYRYDPEGN 851 Query: 78 RVAK-------RVWRRERDLTGWMSLSRKPQVTWYGWDGD-RLTTIQNDRTRIQTIYQPG 129 V + + S +G+D + RLT++ N + ++ Y+ Sbjct: 852 LVEQVDPAGFTTRTEYTHFDLPTVRTSPDGSRMAFGYDTELRLTSVTNPQG-LRWSYEYD 910 Query: 130 SFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRV 189 + L+ ET A L G +V F + Sbjct: 911 AAGQLV-AETDFDGRTIRYDYDAAGQLVGRTNGAGETVTFARDSGGDIVARSGPDGTSTF 969 Query: 190 SEESRRWLASCGLTVEQMQNQMDPVYTPARKI-----HLYHCDHRGLPLALVSTEGATEW 244 + ++ + ++ + D + +I D G + GA Sbjct: 970 AYDATGRVVRATSPDAEVLVERDLLGRVTAEICDGRRLASRYDPLGHRTRRTTPSGAI-S 1028 Query: 245 CAEYDEWGNLLNEENPHQL 263 E+D G L QL Sbjct: 1029 SWEHDPAGRPLALRTAGQL 1047 Score = 42.9 bits (99), Expect = 0.026, Method: Composition-based stats. Identities = 43/268 (16%), Positives = 70/268 (26%), Gaps = 37/268 (13%) Query: 25 EKTDLIPEGVIRTDDERTHRYHYDSQ--------------------HRLVHYTRTQYAEP 64 ++ +P + + YD+ HR+V Sbjct: 505 QRDVALPLAAVVDRNGNRIELGYDADGELAQISHSGGYQLTVRTDGHRIVAVAAATAEGE 564 Query: 65 LVESRYLYDPLGRRV-----AKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDR 119 RY YD G+ + R R + D G + T Y + D + Sbjct: 565 QTLVRYGYDATGQLTQVVNSSGRALRFDYDPDGRIVRWLDRNGTEYRYTYDATGRVVRTA 624 Query: 120 TRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDR 179 + ++ V T T L D L+ + D V Sbjct: 625 GSDDYLAGTLAYDDERHVTTETNSLGHVTAHHFTDRLRPARHVDPLGRV--TAFGWDRFD 682 Query: 180 LESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTE 239 +E+ R+ L + + T + PL V Sbjct: 683 NRTEVTDPLGRTIRYRYDDIGNLVTVERPDGTQTTTTWNAQRR---------PLVSVDAN 733 Query: 240 GATEWCAEYDEWGNLLNEENPHQLQQLI 267 GA W EYD GNL +P + + Sbjct: 734 GA-RWEREYDTRGNLAAVVDPTGGRTDL 760 >UniRef50_Q4ZLF3 YD repeat n=5 Tax=Pseudomonas syringae group RepID=Q4ZLF3_PSEU2 Length = 451 Score = 225 bits (573), Expect = 3e-57, Method: Composition-based stats. Identities = 84/359 (23%), Positives = 142/359 (39%), Gaps = 26/359 (7%) Query: 12 HYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYL 71 H Y YD G L+ D + +Y Y++ +L+ + + + Sbjct: 19 HRRYEYDPAGELSRTLDKL---------RGETQYEYEANGQLLARNTGRVVDG---EEFR 66 Query: 72 YDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQPGSF 131 YD R+ + R + ++ Y +D + + Sbjct: 67 YDAAANRL---NFNTSRFDHVKDNRLKQWANHEYKYDAWGNLIEKTVGIVRWQTFTYDCE 123 Query: 132 TPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSE 191 L++ ET ++ D+L + + + L +L + Sbjct: 124 NRLVKTETMADTQVESTSSYQYDSLGRRVAKQSEIKGQTDHKRFLWQGL--RMLREESPG 181 Query: 192 ESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEW 251 +S ++ G + + K++ +H D G PL + EG W A+Y W Sbjct: 182 QSSLYIYEPGSYAPLARV-DEKEGEVENKVYYFHTDQIGTPLEMTDAEGQIVWQAKYRAW 240 Query: 252 GNLLNEENPHQLQQLIRLPGQQYDEESGLYYNRHRYYDPLQGRYITQDPIGLKGGWNFYQ 311 G + + ++++Q +R GQ +D E+GL+YN RYYDP GR+ITQDPIGL GG+N Y Sbjct: 241 GAV-EKLVVNEVEQNLRFQGQYFDAETGLHYNTFRYYDPEIGRFITQDPIGLLGGFNLYG 299 Query: 312 YPLNPVQYIDSMGLASKYGHLNNGG--YGARPNKPPTPDPSKLPDIAKQLRLPYPIDQA 368 Y NP +ID +GL Y N G Y R + D + L D+ ++ +D A Sbjct: 300 YCRNPTAWIDPLGLDWNYFLSNEDGAYYHGRAS-----DKTSLSDVMRRHGKNKGVDGA 353 Score = 118 bits (295), Expect = 5e-25, Method: Composition-based stats. Identities = 52/227 (22%), Positives = 83/227 (36%), Gaps = 22/227 (9%) Query: 4 DNRIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAE 63 DNR+ + A++ Y+YD G L EKT G++R + YD ++RLV + Sbjct: 86 DNRLKQWANHEYKYDAWGNLIEKTV----GIVRW-----QTFTYDCENRLVKTETMADTQ 136 Query: 64 PLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQ 123 S Y YD LGRRVAK+ + + + W G R+ ++ Sbjct: 137 VESTSSYQYDSLGRRVAKQ-----------SEIKGQTDHKRFLWQGLRMLREESPGQSSL 185 Query: 124 TIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESE 183 IY+PGS+ PL RV+ GE+ D + + Sbjct: 186 YIYEPGSYAPLARVDEKEGEVENKVYYFHTDQIGTPLEMTDAEGQIVWQAKYRAWGAVEK 245 Query: 184 ILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRG 230 ++ + V E++ R+ + Y P D G Sbjct: 246 LVVNEV-EQNLRFQGQYFDAETGLHYNTFRYYDP-EIGRFITQDPIG 290 >UniRef50_Q2SPP2 Rhs family protein n=3 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SPP2_HAHCH Length = 1434 Score = 225 bits (573), Expect = 3e-57, Method: Composition-based stats. Identities = 87/321 (27%), Positives = 129/321 (40%), Gaps = 34/321 (10%) Query: 12 HYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYL 71 Y+YD HG L DL + RYHYD+ RL E ++ Sbjct: 935 DRRYQYDHHGNLALIDDL---------QKGATRYHYDALDRLKQV------ESYCNEQFD 979 Query: 72 YDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQPGSF 131 +DP G ++ + Y G+ + + +++T Y Sbjct: 980 FDPAGNILSDTQSGVSHTKKANRLDFYGDRHFDYDDAGNLVRERRGKGGKLETRYVYNKQ 1039 Query: 132 TPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSE 191 L+ VE G+ + + +L + + Q ++L + Sbjct: 1040 NQLVAVE-KDGQRTEYRYDALGRRISKQDA-----------FGQTEFLWNGDVLLSEQRQ 1087 Query: 192 ESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEW 251 R+ T + D K++ YH DH G P + +EG W A Y + Sbjct: 1088 HLRKVYVYEPDTFRPLAFIQD------EKVYHYHLDHLGTPQEMTDSEGTLVWSARYKAY 1141 Query: 252 GNLLNEENPHQLQQLIRLPGQQYDEESGLYYNRHRYYDPLQGRYITQDPIGLKGGWNFYQ 311 G L + + + +R GQ YDEE+G +YNRHRYYDP GR+I QDPIGL GG N YQ Sbjct: 1142 GALALQ-DVESVHNPLRFQGQYYDEETGFHYNRHRYYDPQSGRFINQDPIGLLGGANAYQ 1200 Query: 312 YPLNPVQYIDSMGLASKYGHL 332 Y NPV ++D GL +K G Sbjct: 1201 YAPNPVGWVDPFGLTAKPGDC 1221 Score = 61.0 bits (146), Expect = 1e-07, Method: Composition-based stats. Identities = 76/463 (16%), Positives = 128/463 (27%), Gaps = 90/463 (19%) Query: 9 RDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVES 68 + + D GRL EK D ++HYD+ RL + P + Sbjct: 782 QANTTRFSRDPLGRLREKHS---------PDGEVSQFHYDAAGRLTEAS-----NPHRQL 827 Query: 69 RYLYDPLGR----RVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDR------------- 111 R+ Y+ LG+ R + V R + D G + ++ T + D+ Sbjct: 828 RFAYNALGQLTEERQDQHVLRHDYDPLGLRTQTQLADGTRLNFAYDQHGLFSEARYNDHL 887 Query: 112 LTTIQNDRT---------RIQTIYQPGSFTPLIRVE-----TATGELAKTQRRSLADTLQ 157 LT I D +Q+ Y+ L R T T + + + L Sbjct: 888 LTQITRDEQGREIARQQGALQSQYEYDLMGRLSRHRVSHEATKTQLIDRRYQYDHHGNLA 947 Query: 158 QSGGEDGGSVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTP 217 G+ + + L ++ES + + L+ V + + Sbjct: 948 LIDDLQKGATRYHYDALDRLKQVESYCNEQFDFDPAGNILSDTQSGVSHTKKANRLDFYG 1007 Query: 218 ARKIHLYHCDHRGL-------------PLALVSTEGATEW--------CAEYDEWGNLLN 256 R D G + + + YD G ++ Sbjct: 1008 DRHFDY---DDAGNLVRERRGKGGKLETRYVYNKQNQLVAVEKDGQRTEYRYDALGRRIS 1064 Query: 257 EENPHQLQQLIRLPGQQYDEESGLYYNRHRYYDPLQGRYITQDPIGLKGGWNFYQYPLN- 315 +++ Q G E + + Y+P R P+ Y Y L+ Sbjct: 1065 KQDAFG-QTEFLWNGDVLLSEQRQHLRKVYVYEPDTFR-----PLAFIQDEKVYHYHLDH 1118 Query: 316 ---PVQYIDSMG------LASKYGHLNNGGYGARPNKPPTPDPSKLPDIAK---QLRLPY 363 P + DS G YG L + N + + R Sbjct: 1119 LGTPQEMTDSEGTLVWSARYKAYGALALQDVESVHNPLRFQGQYYDEETGFHYNRHRYYD 1178 Query: 364 PIDQASSAPNVFKTFFRALSPYDYTLYCRKWVKP-NLTCTPQD 405 P + + Y Y WV P LT P D Sbjct: 1179 PQSGRFINQDPIGL-LGGANAYQYAPNPVGWVDPFGLTAKPGD 1220 Score = 59.4 bits (142), Expect = 2e-07, Method: Composition-based stats. Identities = 74/387 (19%), Positives = 109/387 (28%), Gaps = 90/387 (23%) Query: 9 RDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDER------------THRYHYDSQHRLVHY 56 Y YD G LT+ TD + R + R Y+ + L Sbjct: 523 EGGVTRYVYDEQGLLTQLTDAAGATYKIRYNHRGQPVEMINPLGHSWRREYNGKGLLTCV 582 Query: 57 TRTQYAEPLVESRYLY----------DPLGRRVAKR-VWRRERDLTGWMSLSRKPQ---- 101 T ++RY Y D G K VW L R+ + Sbjct: 583 TDPLGN----QTRYAYNERGLPQTITDAAGN--EKTFVWNAMAQLVSESVNGRRTEYLLN 636 Query: 102 --------------VTWYGWD--GDRLTTIQNDRTRIQTIYQPGS--------------- 130 T Y +D G+ D + +Q Y S Sbjct: 637 EDGDIGAVVDADQRTTEYEYDLLGNVTRVQHLDGSAVQLRYNANSQLTHFIDAAGRCTEY 696 Query: 131 -FTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRV 189 + L +V + L D + G + +RL EI D Sbjct: 697 LYDGLSQVRKKIDANGQVFEY-LYDKERNLIGLINEKGERYKLGYDRNERLIREIGFDGR 755 Query: 190 SEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWCAEYD 249 +E + G + ++ + + + D G S +G YD Sbjct: 756 MQEYQ--YNRAGHLIAHLEGAHLDIPSEQANTTRFSRDPLGRLREKHSPDGE-VSQFHYD 812 Query: 250 EWGNLLNEENPHQLQQLIRLP----GQQYDEESGLYYNRHRYYDPLQGRYITQDPIGLKG 305 G L NPH+ +R GQ +E + RH YDPL R TQ L Sbjct: 813 AAGRLTEASNPHR---QLRFAYNALGQLTEERQDQHVLRH-DYDPLGLRTQTQ----LAD 864 Query: 306 GWNF-YQYPLNPVQYIDSMGLASKYGH 331 G + Y D GL S+ + Sbjct: 865 GTRLNFAY--------DQHGLFSEARY 883 Score = 46.3 bits (108), Expect = 0.003, Method: Composition-based stats. Identities = 42/273 (15%), Positives = 74/273 (27%), Gaps = 43/273 (15%) Query: 23 LTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRT-QYAEPLVESRYLYDPLGRRVAK 81 L E++ R R Y + +L + L D LG R+ Sbjct: 292 LIEQSSRNA--AERMTLHRVDENTY-ALQQLGQPDKVFVGGNGAYRLEALIDALGNRIDI 348 Query: 82 RVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRT--------------RIQTIYQ 127 W+ +++ + W G RL + N + Y Sbjct: 349 AYWQDVEGYAHPITILQAN------W-GPRLHILHNAQGLMCEIQSIQSNGAFATLASYD 401 Query: 128 PGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILAD 187 LIR G R+ + + + G S F + + Sbjct: 402 YDEQQDLIRAADRAGASESYAYRN--HIITRRTLKTGFSFYFEWSQYSPSGKCLRQWGDR 459 Query: 188 RVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWCAE 247 + + W ++ N + + Y DHRG + + EG Sbjct: 460 GIYDYRFEWDTQNKVSHAFDSNG-------GKTTYYY--DHRGKIIKEIDPEGGVT-RMA 509 Query: 248 YDEWGNLLNEENPHQLQQLIRLPGQQYDEESGL 280 Y++ G L+ +P +E GL Sbjct: 510 YNKNGQLIEHIDPEGGVTRYVY------DEQGL 536 >UniRef50_C5AA19 Rhs family protein n=1 Tax=Burkholderia glumae BGR1 RepID=C5AA19_BURGB Length = 1596 Score = 224 bits (571), Expect = 6e-57, Method: Composition-based stats. Identities = 96/393 (24%), Positives = 131/393 (33%), Gaps = 83/393 (21%) Query: 4 DNRIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAE 63 N + A + YD G +TEK R R+ +D +RLV Sbjct: 1181 GNLLRDYAGTHFEYDAQGNVTEKRSP----------GRVQRFEWDGFNRLVGVRTETATT 1230 Query: 64 PLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQ 123 Y YD GRR+A+ V Q + +GWDGD L Sbjct: 1231 RTEAR-YFYDAFGRRIARVV---------------DGQASVFGWDGDTLAYESGPEYSRH 1274 Query: 124 TIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESE 183 +Y+ G+F PL + A T + Sbjct: 1275 YLYEAGTFVPLAQYTGAPVTGMPTPVAREHERYTPEDDPLLRV----------------- 1317 Query: 184 ILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATE 243 P ++ YHCD G P + G Sbjct: 1318 -----------------------------PERGAEARLAFYHCDQIGTPRMITDELGEIV 1348 Query: 244 WCAEYDEWG------NLLNEENPHQLQQLIRLPGQQYDEESGLYYNRHRYYDPLQGRYIT 297 W A Y WG +++ +++ +R GQ +D+ESGL YNRHRYY GRY++ Sbjct: 1349 WEARYQAWGEARDVIERVSKATGERVRNPLRFQGQHFDDESGLAYNRHRYYAADVGRYVS 1408 Query: 298 QDPIGLKGGWNFYQYPLNPVQYIDSMGLASKYGHLNNGGYGARPNKPPTPDPSKLPDIAK 357 +DP L GG N + Y NPVQ+ID +GLA G P P A+ Sbjct: 1409 KDPAELLGGLNEFAYVPNPVQWIDPLGLAGTPAGGAGGKPARCPKCNPCEG-RNPTATAR 1467 Query: 358 QLRLPYPIDQASSAPNVFKTFFRALSPYDYTLY 390 + P S NV L YTLY Sbjct: 1468 SWQGTDPYSGVDSYQNVVVKRGTVL----YTLY 1496 Score = 64.8 bits (156), Expect = 7e-09, Method: Composition-based stats. Identities = 50/292 (17%), Positives = 80/292 (27%), Gaps = 57/292 (19%) Query: 12 HYLYRYDRHGRLTEKTDLIPEGVIRTDD------------ERTHRYHYDSQHRLVHYTRT 59 Y YD GR E TD + D +T + YD++ RLV T Sbjct: 747 KTRYVYDGAGRPVEVTDAKGGTKLMAYDDAGQLASYTDCSGKTSTWTYDARGRLVAATDA 806 Query: 60 QYAEPLVE----------------SRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVT 103 R+ YD GR +A S +VT Sbjct: 807 AGGTTAYRYAANGTLEEASSAAGVERFQYDAEGRLLA--------------STDALQRVT 852 Query: 104 WYGWDGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGED 163 + +D + D Y L+R+ A + + +L L+ G + Sbjct: 853 RFTYDAAGRIGARTDAAGHTLSYGYDRIGRLVRLTDANHASFQFRYDALGRLLETVGFDG 912 Query: 164 GGSVVFPPVLVQMLDRLESEILADRVSEESRRWLA-------SCGLTVEQMQNQMDPVYT 216 + L ++ +V + L + + +D Sbjct: 913 KLTRYEYDADSGQLASIDDAGRITQVEYDRGGRLVRHVSGEVEERFAYDALGRLIDARNA 972 Query: 217 PARKIHLYHCDHRGLPLA------LVSTEGATEWCAEYDEWGNLLNEENPHQ 262 +R H Y D G + L + W YDE G + P Sbjct: 973 HSRVQHFY--DPVGNLVREHHASMLFGEARSVVWHHAYDELGARVRTVRPDG 1022 Score = 64.1 bits (154), Expect = 1e-08, Method: Composition-based stats. Identities = 47/250 (18%), Positives = 79/250 (31%), Gaps = 36/250 (14%) Query: 11 AHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRY 70 YRY +G L E + R+ YD++ RL+ T +R+ Sbjct: 809 GTTAYRYAANGTLEEASSAAG----------VERFQYDAEGRLLASTDAL----QRVTRF 854 Query: 71 LYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVT---------WYGWDGDRLTTIQNDRTR 121 YD GR A+ G+ + R ++T Y G L T+ D Sbjct: 855 TYDAAGRIGARTDAAGHTLSYGYDRIGRLVRLTDANHASFQFRYDALGRLLETVGFDGKL 914 Query: 122 IQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLE 181 + Y S L ++ G + + + ++ GE + D L Sbjct: 915 TRYEYDADS-GQLASID-DAGRITQVEYDRGGRLVRHVSGEVEERFAY--------DALG 964 Query: 182 SEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYH-CDHRGLPLALVSTEG 240 I A + + G V + M ++ AR + +H D G + V +G Sbjct: 965 RLIDARNAHSRVQHFYDPVGNLVREHHASM--LFGEARSVVWHHAYDELGARVRTVRPDG 1022 Query: 241 ATEWCAEYDE 250 Y Sbjct: 1023 HRVDWLTYGS 1032 Score = 62.1 bits (149), Expect = 5e-08, Method: Composition-based stats. Identities = 52/283 (18%), Positives = 84/283 (29%), Gaps = 64/283 (22%) Query: 8 ARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQ----------HRLVHYT 57 A A + +RYD GRL E D + RY YD+ R+ Sbjct: 889 ANHASFQFRYDALGRLLE---------TVGFDGKLTRYEYDADSGQLASIDDAGRITQVE 939 Query: 58 RTQYA------EPLVESRYLYDPLGR----RVAKRVWRRERDLTGWMSLSR--------- 98 + VE R+ YD LGR R A + D G + Sbjct: 940 YDRGGRLVRHVSGEVEERFAYDALGRLIDARNAHSRVQHFYDPVGNLVREHHASMLFGEA 999 Query: 99 KPQVTWYGWD--GDRLTTIQNDRTRIQTIYQPGSFTP------LIRVETATGELAKTQRR 150 + V + +D G R+ T++ D R+ + + RV+ +L + RR Sbjct: 1000 RSVVWHHAYDELGARVRTVRPDGHRVDWLTYGSGYVHGMALDGEERVQFERDDLHREVRR 1059 Query: 151 SLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQ 210 +L L D L + + +R + + Q+ + Sbjct: 1060 ALPGKLVGETTRDPAG---------RLAKQALHREDAPAALAARHYCYDAASQLTQVDDS 1110 Query: 211 MDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGN 253 Y D G + V+ +D GN Sbjct: 1111 QAGSTG-------YRYDPVGRLIEAVTP--NLGERFAFDPAGN 1144 Score = 61.7 bits (148), Expect = 6e-08, Method: Composition-based stats. Identities = 64/309 (20%), Positives = 90/309 (29%), Gaps = 45/309 (14%) Query: 7 IARDAHYLYRY-DRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPL 65 I D + Y D + L + T D R HYD++ LV + R + + Sbjct: 657 IHPDGGEEWMYRDANHNLVQHT---------YADGGVERMHYDARDNLVRHQRVDGS--V 705 Query: 66 VESRY--------LYDPLGRRVAKRVWRRERDLTGWMSLSRKP--QVTWYGWDGDRLTTI 115 +E Y L DP G W+RE D G +S P T Y +DG Sbjct: 706 LEMHYDEKDQMVRLVDPQG-----YAWQREYDDQGNVSADIDPLGHKTRYVYDGAGRPVE 760 Query: 116 QNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQ 175 D + L T T L + GG+ + Sbjct: 761 VTDAKGGTKLMAYDDAGQLASY-TDCSGKTSTWTYDARGRLVAATDAAGGTTAYRYAANG 819 Query: 176 MLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLAL 235 L+ S E ++ A L Q +T D G A Sbjct: 820 TLEEASS-----AAGVERFQYDAEGRLLASTDALQRVTRFT---------YDAAGRIGAR 865 Query: 236 VSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRL-PGQQYDEESGLYYNRHRY-YDPLQG 293 G T YD G L+ + + R + E G RY YD G Sbjct: 866 TDAAGHTL-SYGYDRIGRLVRLTDANHASFQFRYDALGRLLETVGFDGKLTRYEYDADSG 924 Query: 294 RYITQDPIG 302 + + D G Sbjct: 925 QLASIDDAG 933 Score = 56.7 bits (135), Expect = 2e-06, Method: Composition-based stats. Identities = 47/303 (15%), Positives = 83/303 (27%), Gaps = 40/303 (13%) Query: 3 PDNRIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYA 62 P IA A ++ +D GR+ E EG RY YD LV Sbjct: 519 PARLIAPQAIVVFLHDDAGRIVEAVHHDREGARLA---TLARYSYDRDGDLVAAFDEYGN 575 Query: 63 EPLVE------SRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQV-TWYGWDGD-RLTT 114 + Y D GR + + T + W + R+ + Sbjct: 576 RREYRYQHHLLTHYT-DRTGRGMHLEWNGTGARAKCVREYADDGSFDTRFAWHPNFRMVS 634 Query: 115 IQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPV-- 172 + + + Y R+ G R + + +Q + + G + Sbjct: 635 VTDAHGGVTRHY-YDRHGYTFRIIHPDGGEEWMYRDANHNLVQHTYADGGVERMHYDARD 693 Query: 173 LVQMLDRLESEILADRVSEESR--RWLASCGLTVEQMQNQMDPVYT---PARKIHLYHCD 227 + R++ +L E+ + R + G ++ + V P Y D Sbjct: 694 NLVRHQRVDGSVLEMHYDEKDQMVRLVDPQGYAWQREYDDQGNVSADIDPLGHKTRYVYD 753 Query: 228 HRGLPLALVSTEGAT--------------------EWCAEYDEWGNLLNEENPHQLQQLI 267 G P+ + +G T YD G L+ + Sbjct: 754 GAGRPVEVTDAKGGTKLMAYDDAGQLASYTDCSGKTSTWTYDARGRLVAATDAAGGTTAY 813 Query: 268 RLP 270 R Sbjct: 814 RYA 816 >UniRef50_A1U3R9 YD repeat protein n=3 Tax=Gammaproteobacteria RepID=A1U3R9_MARAV Length = 1611 Score = 224 bits (570), Expect = 7e-57, Method: Composition-based stats. Identities = 88/356 (24%), Positives = 145/356 (40%), Gaps = 44/356 (12%) Query: 5 NRIAR-DAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAE 63 R+ A Y+YD +G L K+ +R +Y YD RLV Sbjct: 1161 GRLKDISAQRDYQYDPNGNL--KSIQDSRKGLR-------QYVYDPMDRLVGV------R 1205 Query: 64 PLVESRYLYDPLGRRVAK---RVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRT 120 + + ++DP G + + + ++ G Y G+ + + Sbjct: 1206 GDLYEQLIHDPAGNLLEQNLGASSGQSANVRGNRLTMHGDSHYEYDEFGNLIEERRGKGQ 1265 Query: 121 RIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRL 180 ++ T Y L V T G + + + ++ G + + DRL Sbjct: 1266 KLVTRYTYDCEHRLTSVTTPDGSTWHYEYDAFGRRIAKTNG------LTRTEFLWQGDRL 1319 Query: 181 ESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEG 240 +E ++ R +L +D +++ YH DH G P L + +G Sbjct: 1320 IAE----ETGDQYRTYLYEPDSFKPLAL--VDGQGPEEAEVYYYHLDHLGTPQELTNQQG 1373 Query: 241 ATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEESGLYYNRHRYYDPLQGRYITQDP 300 W Y +GN++ ++ + +R GQ +D E+GL+YNRHRYY+P GR+IT DP Sbjct: 1374 RLVWSVTYRAYGNVVQQQVAE-IDNPLRFQGQYHDPETGLHYNRHRYYNPNTGRFITPDP 1432 Query: 301 IGLKGGWNFYQYPLNPVQYIDSMGLASKYGHL------------NNGGYGARPNKP 344 IGL GG N YQY NP ++D +GLAS+ + ++G +G P P Sbjct: 1433 IGLAGGLNNYQYVPNPTGWVDPLGLASRQKNDPDSAGSPEGIGGDSGPFGGEPKTP 1488 Score = 112 bits (280), Expect = 3e-23, Method: Composition-based stats. Identities = 48/228 (21%), Positives = 69/228 (30%), Gaps = 31/228 (13%) Query: 4 DNRIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAE 63 NR+ Y YD G L E + RY YD +HRL T + Sbjct: 1237 GNRLTMHGDSHYEYDEFGNLIE-------ERRGKGQKLVTRYTYDCEHRLTSVTTPDGS- 1288 Query: 64 PLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQ 123 Y YD GRR+AK T + W GDRL + Sbjct: 1289 ---TWHYEYDAFGRRIAKT---------------NGLTRTEFLWQGDRLIAEETGDQYRT 1330 Query: 124 TIYQPGSFTPLIRVETATGELAKTQRRSLAD-TLQQSGGEDGGSVVFPPVLVQMLDRLES 182 +Y+P SF PL V+ E A+ L Q G +V+ + ++ Sbjct: 1331 YLYEPDSFKPLALVDGQGPEEAEVYYYHLDHLGTPQELTNQQGRLVWSVTYRAYGNVVQQ 1390 Query: 183 EILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRG 230 ++ + R+ + Y P D G Sbjct: 1391 QV---AEIDNPLRFQGQYHDPETGLHYNRHRYYNP-NTGRFITPDPIG 1434 Score = 66.4 bits (160), Expect = 2e-09, Method: Composition-based stats. Identities = 52/301 (17%), Positives = 93/301 (30%), Gaps = 50/301 (16%) Query: 3 PDNRIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYA 62 P RI Y Y G+LT+ + D R H++ ++SQ +L+ T A Sbjct: 819 PKGRIT-----RYTYSPQGQLTQ---------VDLPDGRAHKWGWNSQGQLIEETTPTGA 864 Query: 63 EPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRI 122 +Y YD G+ +AK+ + +T Y +DG T + Sbjct: 865 F----YQYRYDEFGQLLAKK--------------DARGAITRYRYDGLGRVTEEILSGNR 906 Query: 123 QTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVL--------- 173 YQ ++ + R G + + + L + DG + + Sbjct: 907 SRHYQYNAYNKVTRFVDEQGRETRYEYDNNLHLLTRRINPDGSELCYRYDHHRFLLTHIE 966 Query: 174 -----VQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDH 228 +D + ++ + + R L + + + Y D Sbjct: 967 NERGEAYRIDYYPNGLVKQETAFDGHRTAYQYDLNGHLTEKAEYGTSSEVLQTTTYERDE 1026 Query: 229 RGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRLP--GQQYDEESGLYYNRHR 286 G L +G Y+ G L+ ++ H G E G R+R Sbjct: 1027 LGQLLKKTLPDGREI-QYGYNADGKLIGVDDGH-WPLAFEYDEFGLLKTEHQGWASLRYR 1084 Query: 287 Y 287 Y Sbjct: 1085 Y 1085 Score = 47.1 bits (110), Expect = 0.001, Method: Composition-based stats. Identities = 46/305 (15%), Positives = 90/305 (29%), Gaps = 53/305 (17%) Query: 9 RDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYA------ 62 A +L YD GRL K + P G Y YD RL T Sbjct: 738 DGAKHLSEYDEQGRL--KVSIDPMGA-------RTEYQYDKSGRLQSKTGPDGQPILFTY 788 Query: 63 ---------EPLVESRYLY----------DPLGRRVAKRVWRRERDLTGWMSLSRKPQVT 103 ++ Y DP G R+ + + + LT + Sbjct: 789 RKGRIAEIHRNGQTWKFDYTRHGDLACEADPKG-RITRYTYSPQGQLTQVDLPDGRAHKW 847 Query: 104 WYGWDGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGED 163 GW+ + T Y+ F L+ + A G + + + L ++ + Sbjct: 848 --GWNSQGQLIEETTPTGAFYQYRYDEFGQLLAKKDARGAITRYRYDGLGRVTEEILSGN 905 Query: 164 GGSVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQ------------NQM 211 ++ ++ + R ++ L + + + + + Sbjct: 906 RSRHYQYNAYNKVTRFVDEQGRETRYEYDNNLHLLTRRINPDGSELCYRYDHHRFLLTHI 965 Query: 212 DPVYTPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRLPG 271 + A +I Y GL + +G +YD G+L + ++++ Sbjct: 966 ENERGEAYRIDYY---PNGLVKQETAFDGHRTA-YQYDLNGHLTEKAEYGTSSEVLQTTT 1021 Query: 272 QQYDE 276 + DE Sbjct: 1022 YERDE 1026 Score = 44.0 bits (102), Expect = 0.013, Method: Composition-based stats. Identities = 40/240 (16%), Positives = 69/240 (28%), Gaps = 34/240 (14%) Query: 40 ERTHRYHYDSQHRLVHYTRTQYAEPLVESRY--------LYDPLGRRVAKRVWRRERDLT 91 + R+ +D+++ + + + RY DP G AK + + Sbjct: 697 QVDTRFEWDNENHTCTVSYVDGSREI--WRYDGTAQLQEKVDPDG---AKHLSEYDEQGR 751 Query: 92 GWMSLSRKPQVTWYGWD--GDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQR 149 +S+ T Y +D G + D I Y+ G + R G+ K Sbjct: 752 LKVSIDPMGARTEYQYDKSGRLQSKTGPDGQPILFTYRKGRIAEIHR----NGQTWKFDY 807 Query: 150 RSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQN 209 D ++ + + Q+ + A W + L E Sbjct: 808 TRHGDLACEADPKGRITRYTYSPQGQLTQVDLPDGRA-----HKWGWNSQGQLIEET--- 859 Query: 210 QMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRL 269 TP + Y D G LA GA YD G + E + + Sbjct: 860 ------TPTGAFYQYRYDEFGQLLAKKDARGAIT-RYRYDGLGRVTEEILSGNRSRHYQY 912 >UniRef50_B1J8X0 YD repeat protein n=50 Tax=Gammaproteobacteria RepID=B1J8X0_PSEPW Length = 1411 Score = 222 bits (566), Expect = 2e-56, Method: Composition-based stats. Identities = 88/352 (25%), Positives = 148/352 (42%), Gaps = 22/352 (6%) Query: 12 HYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYL 71 H Y+YD G L D + + +Y Y++ +L + + Sbjct: 983 HRRYQYDPAGELVRTLDKLRGEI---------KYEYEANGQL---HSRDTGSLVGSEEFR 1030 Query: 72 YDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQPGSF 131 YDP R+ R+ + + Q Y G+ L ++ +++Q+ + Sbjct: 1031 YDPAANRLD-FNARQFEKVKDNRIKRWRDQEYRYDPWGN-LIEKRSGHSKLQS-FSYDCE 1087 Query: 132 TPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSE 191 L+R ET ++ D+L + + + L +L + Sbjct: 1088 NRLVRAETLVNGKLESTGAYRYDSLGRRIAKQSEINGTTEQKRFLWQGL--RMLREETPG 1145 Query: 192 ESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEW 251 +S +L G + +D +KI+ +H D G PL L +EG W A Y W Sbjct: 1146 QSILYLYEPGSYAPLAR--VDQAEGDEQKIYYFHTDQIGTPLELTDSEGKIVWQATYRSW 1203 Query: 252 GNLLNEENPHQLQQLIRLPGQQYDEESGLYYNRHRYYDPLQGRYITQDPIGLKGGWNFYQ 311 G + + +++ Q +R GQ +D E+ L+YN RYYDP GR+I DPIGL+GG N ++ Sbjct: 1204 GAI-EQLTVNEIDQNLRFQGQYFDRETSLHYNTLRYYDPDVGRFIGPDPIGLRGGVNLFR 1262 Query: 312 YPLNPVQYIDSMGLAS-KYGHLNNGGYGARPNKPPTPDPSKLPD-IAKQLRL 361 Y +NP+ +ID GLA + +NN R TP + + IA +L + Sbjct: 1263 YNVNPIYWIDPTGLAPCQVRVVNNTKIHGRGQVDGTPGHDQFSEAIANKLAM 1314 Score = 59.4 bits (142), Expect = 3e-07, Method: Composition-based stats. Identities = 60/324 (18%), Positives = 104/324 (32%), Gaps = 52/324 (16%) Query: 8 ARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVE 67 A+ Y YD+ RLT + ++ +R+ YD+ RL R + Sbjct: 729 AKGQWVRYEYDKALRLT---------ALVNENSAAYRFAYDASDRLSEEVRVDN----LT 775 Query: 68 SRYLYDPLGRRVA-------------KRVWRRERDLTGWMSLS-RKPQVTWYGWD-GDRL 112 R+ YD G V +R ERD G + + + +D DRL Sbjct: 776 RRFSYDAGGNLVRLDEIGYGENGERPERDTVFERDAIGRLLAKVNRDARQDFEYDEADRL 835 Query: 113 TTIQN---------DRTRIQTIYQPGSFTPLIRVETATGELA-KTQRRSLADTLQQSGGE 162 +IQ T + Y+ L + T +G L + S TL G Sbjct: 836 LSIQRTPSSLGKQLGITGEKLSYRYDLLGRLTQELTPSGALDYEYDPLSNLTTLTLPDGR 895 Query: 163 DGGSVVFPPVLVQMLDRLESEILADRVSEESRRWLASC--------GLTVEQMQNQMDPV 214 + + + L+ L+ ++++D ++ R + G + Sbjct: 896 KVNHLYYGSGHLHQLN-LDGQVISDMERDDLHREVYRTQGKLTSCFGYDAMGRKAWQFAS 954 Query: 215 YTPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRL--PGQ 272 PA K+ L + +YD G L+ + + + GQ Sbjct: 955 TLPAEKLSQVQNPGINTSLLVEHAYNPIHRRYQYDPAGELVRTLDKLRGEIKYEYEANGQ 1014 Query: 273 QYDEESGLYY--NRHRYYDPLQGR 294 + ++G R YDP R Sbjct: 1015 LHSRDTGSLVGSEEFR-YDPAANR 1037 Score = 45.2 bits (105), Expect = 0.005, Method: Composition-based stats. Identities = 47/251 (18%), Positives = 74/251 (29%), Gaps = 38/251 (15%) Query: 12 HYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYL 71 H Y + GRLTE ++ + + E RY YD +L + + + + Y Sbjct: 389 HLHYEH-PLGRLTEVKRIVDQQAV----ETLVRYRYDDSGQLTEVI-NRNGDSVRQFHY- 441 Query: 72 YDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQPGSF 131 G V W + + KP+V + W +D Y F Sbjct: 442 --AEGLMVRHSNALGLICEYRWQTQNDKPRVVEH-W--------TSDGEHYHFRYD---F 487 Query: 132 TPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSE 191 T + + S G + L D Sbjct: 488 AQRTSWATDVLGRELEIHYNEDHRVVASRDFGGERYGME---FDAFGNIIGFTLPDG--- 541 Query: 192 ESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVS--TEGATEWCAEYD 249 GL + ++ RKI H H PL + +G+ W + YD Sbjct: 542 ------NRLGLKYDDFGRLVEETDPLGRKISYKH--HLATPLVTETRFPDGSI-WKSRYD 592 Query: 250 EWGNLLNEENP 260 GNL+ E +P Sbjct: 593 GKGNLIAEIDP 603 Score = 42.1 bits (97), Expect = 0.046, Method: Composition-based stats. Identities = 44/263 (16%), Positives = 80/263 (30%), Gaps = 45/263 (17%) Query: 9 RDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVES 68 HY +RYD R + TD++ R HY+ HR+V +E Sbjct: 477 DGEHYHFRYDFAQRTSWATDVL---------GRELEIHYNEDHRVVASRDFGGERYGMEF 527 Query: 69 RYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQP 128 D G + + DG+RL +D R+ P Sbjct: 528 ----DAFGNIIG-----------------------FTLPDGNRLGLKYDDFGRLVEETDP 560 Query: 129 GSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFP--PVLVQMLDRLESEILA 186 I + T+ R ++ +S + G+++ P+ + + L Sbjct: 561 --LGRKISYKHHLATPLVTETRFPDGSIWKSRYDGKGNLIAEIDPLGHKTEYLNGEDGLP 618 Query: 187 DRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWCA 246 + + + + T Q++ D + K Y D R +A+ T Sbjct: 619 HTIIDANFKSKYLWWNTYAQVERFEDC----SGKSTYYRYDERQHLIAVTDALNQTT-TL 673 Query: 247 EYDEWGNLLNEENPHQLQQLIRL 269 E G +L +P + Sbjct: 674 ERKPDGEVLRIHHPDGTAESFTY 696 >UniRef50_Q2SKM2 Rhs family protein n=3 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SKM2_HAHCH Length = 1552 Score = 220 bits (560), Expect = 8e-56, Method: Composition-based stats. Identities = 88/350 (25%), Positives = 132/350 (37%), Gaps = 37/350 (10%) Query: 15 YRYDRHGRLTEKT-----------DLIPEGVIRTDDERTHRYHYDSQHRLVH--YTRTQY 61 + YDRHG T+ + D + R RY YD RL+ + Q Sbjct: 1018 FGYDRHGLFTQASFNGDVLASIERDEDGRELRRRQGAAESRYDYDVMGRLIRHRVSHRQS 1077 Query: 62 AEPLVESRYLYDPLGRR-----VAKRVWRRERDLTGWMSLSRK--PQVTWYGWDGDRLTT 114 ++E Y YD G + K D + + + G+ L Sbjct: 1078 KARIIERSYGYDASGNLALIDDLKKGTTHYRYDALDRLKTVEGYCNEEFAFDPAGNILDG 1137 Query: 115 IQNDRTRIQTIYQPGSFTPLIR---VETATGELAKTQRRSLADTLQQSGGEDGGSVVFPP 171 + + F + G+ + + R + Q + Sbjct: 1138 QNQAKGNRLNFHGDRHFEYDAAGNLILEKRGKGGRLETRYQYNKQNQLIAIEKDGQKTEY 1197 Query: 172 VLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPA----------RKI 221 + R+ + D + W L+ ++ VY P +++ Sbjct: 1198 QYDALGRRIAKQ---DAFGKTEFLWNGDVLLSEQRNHLHKIYVYEPNSFRPLAFIQDKQV 1254 Query: 222 HLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEESGLY 281 + YH DH G P + + EG W A Y +GNL ++ +Q +R GQ YDEE+GL+ Sbjct: 1255 YHYHLDHLGTPQEMTNAEGEVVWSARYKAYGNLAL-KDVEDVQNPLRFQGQYYDEETGLH 1313 Query: 282 YNRHRYYDPLQGRYITQDPIGLKGGWNFYQYPLNPVQYIDSMGLASKYGH 331 YNRHRYYDP R+I QDP+GL GG N YQY NP + D GL K G Sbjct: 1314 YNRHRYYDPSAARFINQDPVGLLGGDNNYQYAPNPTGWGDPFGLTCKEGK 1363 Score = 92.2 bits (227), Expect = 4e-17, Method: Composition-based stats. Identities = 49/275 (17%), Positives = 83/275 (30%), Gaps = 54/275 (19%) Query: 4 DNRIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAE 63 NR+ + YD G L RY Y+ Q++L+ + Sbjct: 1143 GNRLNFHGDRHFEYDAAGNLI-------LEKRGKGGRLETRYQYNKQNQLIAIEKD---- 1191 Query: 64 PLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQ 123 ++ Y YD LGRR+AK+ T + W+GD L + Q + Sbjct: 1192 -GQKTEYQYDALGRRIAKQ---------------DAFGKTEFLWNGDVLLSEQRNHLHKI 1235 Query: 124 TIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESE 183 +Y+P SF PL ++ + + GE S + L +E Sbjct: 1236 YVYEPNSFRPLAFIQDKQVYHYHLDHLGTPQEMTNAEGEVVWSARYKAYGNLALKDVED- 1294 Query: 184 ILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATE 243 + R+ + Y P+ + D P+ L+ + Sbjct: 1295 ------VQNPLRFQGQYYDEETGLHYNRHRYYDPSAA-RFINQD----PVGLLGGDNN-- 1341 Query: 244 WCAEYDEWGNLLNEENPHQLQQLIRLP---GQQYD 275 +Y NP L G++ D Sbjct: 1342 --YQYAP--------NPTGWGDPFGLTCKEGKELD 1366 Score = 58.7 bits (140), Expect = 4e-07, Method: Composition-based stats. Identities = 60/312 (19%), Positives = 92/312 (29%), Gaps = 66/312 (21%) Query: 9 RDAHYLYRY----------DRHGRLTE-KTDLIPEGVIRTDDERTHRYHYDSQHRLVHYT 57 A Y Y D G+ E + + + V TD++ T RY Y++Q ++ T Sbjct: 734 EGAQTQYEYNEQGLPQKIIDALGQARELQWNREGQLVSETDNQHTTRYAYNAQGQVRAAT 793 Query: 58 RTQYAEPLVESRYLYDPLGRRVA---------KRVWRRERDLTGWMSLSRKPQVTWYGWD 108 Q Y YD G K + LT ++ + + T Y +D Sbjct: 794 DHQGQTTA----YQYDRNGNVTEVKRPDGSVLKMRYNANDQLTHFIDAAGRC--TEYVYD 847 Query: 109 GDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVV 168 G + D Y LI + GE + + L Q G DG Sbjct: 848 GLAQVRKRIDPAGQTFEYLYDKERNLIGLINEKGERYEL-AYDRNERLIQEIGFDGRVQQ 906 Query: 169 FPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDH 228 + G ++ D A+ L+ D Sbjct: 907 YQYD--------------------------PAGHLKAHIEGVHDDERIRAQHTTLFKRDP 940 Query: 229 RGLPLALVSTEGATEWCAEYDEWGNLLNEENPH-----QLQQLIRLPGQQYDEESGLYYN 283 G S +G Y+ G L NP+ RL + D + Sbjct: 941 LGRLREKHSPDGDI-SRFAYNANGQLTQASNPYRTLEFAYTPTGRLAEEIQDGQ------ 993 Query: 284 RHRY-YDPLQGR 294 R R+ Y+PL R Sbjct: 994 RLRHEYNPLGAR 1005 Score = 50.2 bits (118), Expect = 2e-04, Method: Composition-based stats. Identities = 48/296 (16%), Positives = 85/296 (28%), Gaps = 71/296 (23%) Query: 4 DNRIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRT---- 59 D RI L++ D GRL EK D R+ Y++ +L + Sbjct: 925 DERIRAQHTTLFKRDPLGRLREKHS---------PDGDISRFAYNANGQLTQASNPYRTL 975 Query: 60 -----------QYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWD 108 + + R+ Y+PLG R+ + G+ R T ++ Sbjct: 976 EFAYTPTGRLAEEIQDGQRLRHEYNPLGARIQSLLPNGGVLGFGYD---RHGLFTQASFN 1032 Query: 109 GDRLTTIQNDR---------TRIQTIYQPGSFTPLIRV-----ETATGELAKTQRRSLAD 154 GD L +I+ D ++ Y LIR ++ + ++ + Sbjct: 1033 GDVLASIERDEDGRELRRRQGAAESRYDYDVMGRLIRHRVSHRQSKARIIERSYGYDASG 1092 Query: 155 TLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPV 214 L G+ + + L +E + + + L N Sbjct: 1093 NLALIDDLKKGTTHYRYDALDRLKTVEGYCNEEFAFDPAGNILDGQNQAKGNRLN----- 1147 Query: 215 YTPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRLP 270 +H D EYD GNL+ E+ + R Sbjct: 1148 ---------FHGD----------------RHFEYDAAGNLILEKRGKGGRLETRYQ 1178 Score = 47.9 bits (112), Expect = 0.001, Method: Composition-based stats. Identities = 45/320 (14%), Positives = 84/320 (26%), Gaps = 70/320 (21%) Query: 10 DAHYLYR-YDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVES 68 LY ++ G + E L +G D + RY YD L A Sbjct: 516 WGKRLYVLHNAQGLICEIQSLRADG----DVDTLVRYEYDDAQDLAQVRDPAGAGESYAY 571 Query: 69 R---------------Y----LYDPLGRRVAKRVWRRERDLTGWMSLSRK--------PQ 101 R Y YD R V + + D + K Sbjct: 572 RNHVITRRTLKTGFSFYFEWSRYDKAARCVRQWGDQGVYDYRFEWDPANKTSHAIDSNGG 631 Query: 102 VTWYGWD-----------------------GDRLTTIQNDRTRIQTIYQPG--------S 130 T + +D G+ + + Y + Sbjct: 632 RTTFHYDDRGQIVKEIDPEGGITRRAYDNAGNLVEQTDPNGHSTHYAYNDNGQLTALIDA 691 Query: 131 FTPLIRVETATGELAKTQRRSLADTLQQSGGEDG-GSVVFPPVLVQMLDRLESEILADRV 189 +++ + +L ++ E G + + P Q + L ++ Sbjct: 692 NGGHYKIDYNDDGMPVAITNALGHVWRREYNEQGLLARITDPEGAQTQYEYNEQGLPQKI 751 Query: 190 SEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWCAEYD 249 + + Q+ ++ D +T Y + +G A +G T +YD Sbjct: 752 IDALGQARELQWNREGQLVSETDNQHTTR-----YAYNAQGQVRAATDHQGQTTA-YQYD 805 Query: 250 EWGNLLNEENPHQLQQLIRL 269 GN+ + P +R Sbjct: 806 RNGNVTEVKRPDGSVLKMRY 825 >UniRef50_Q87U70 Rhs family protein n=2 Tax=Pseudomonas RepID=Q87U70_PSESM Length = 1572 Score = 220 bits (559), Expect = 1e-55, Method: Composition-based stats. Identities = 100/402 (24%), Positives = 150/402 (37%), Gaps = 55/402 (13%) Query: 6 RIARDAHYLYRY---------DRHG-RLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVH 55 R+ + Y + D +G RLT R +Y YD Q RL Sbjct: 1053 RLPDGSKLDYHHQRGGQLGSIDLNGSRLTTHQFSAGREQQRQQGLLLSQYQYDEQGRLQA 1112 Query: 56 YTRTQYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSR-------KPQVTWYGWD 108 ++ +Q L Y YD G R+ + L R P+ + Sbjct: 1113 HSVSQQDRHLFHRHYAYDANGNLAGVNDSRKGNRSYHYDPLDRLINVRGTTPESFAHDPA 1172 Query: 109 GDRLTTIQNDRTRIQTI------------YQPGSFTPLIRVETATGELAKTQRRSLADTL 156 G+ L + + Y ++ IR TG+ T+ R Sbjct: 1173 GNLLGQGDQPAANLANVKGNRLLMQGDRHYDYDAYGNQIRERRGTGQKLVTEYRYDCQHR 1232 Query: 157 QQSGGEDGGSVV------FPPVLVQMLDRLESEIL-------ADRVSEESRRWLASCGLT 203 GGSV F + + +D +E L A+ R ++ G Sbjct: 1233 LIGVSLPGGSVASYKYDAFGRRIEKTIDGHITEFLWQGERLIAESADNRYRSYIYEPGTF 1292 Query: 204 VEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQL 263 + A Y DH G P L G W A+Y +GNL + ++ Sbjct: 1293 RPLAMLDGEGPLKAAP--FYYQLDHLGTPQELTDYSGEIMWSAKYRAYGNLATL-DIAEI 1349 Query: 264 QQLIRLPGQQYDEESGLYYNRHRYYDPLQGRYITQDPIGLKGGWNFYQYPLNPVQYIDSM 323 + +R GQ +D E+GL+YNRHRYY+P GR++T DPI L GG N YQY NP ++D + Sbjct: 1350 ENPLRFQGQYFDAETGLHYNRHRYYNPGTGRFLTPDPIKLAGGLNNYQYVPNPTGWVDPL 1409 Query: 324 GLASKYGHLNNGGYGARPNKPPTPD---PSKLPDIAKQLRLP 362 GL+ + + NK P + PS D +++LR P Sbjct: 1410 GLSGEC-------PDSEKNKIPVEEASSPSNSYDNSEELRPP 1444 Score = 77.5 bits (189), Expect = 1e-12, Method: Composition-based stats. Identities = 44/267 (16%), Positives = 82/267 (30%), Gaps = 43/267 (16%) Query: 9 RDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVES 68 Y YD GRL E IR D H+ ++ +L+ + Sbjct: 779 DGNETHYSYDLRGRLLE---------IRHPDGSRHQLGWNGLGQLLEERLPDGG----QR 825 Query: 69 RYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWD-GDRLTTIQNDRTRIQTIYQ 127 +Y YD LGR++ ++ +T Y WD +RL + + Sbjct: 826 KYRYDALGRQITRQ--------------EETGAITHYQWDAANRLAQATLPGGATR-AFS 870 Query: 128 PGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQML---------- 177 ++ + G + + + + + DG + + ++L Sbjct: 871 YNAYGKVTAERDELGRITRYEYADNLHLVSRRINPDGSQLRYRYDNARLLLTEIENERGE 930 Query: 178 ---DRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLA 234 S L R + R A Q+ + + + Y D G L Sbjct: 931 HYHLDYYSNGLIQRETGFDGRSTAYEYDLNGQLLKKTEFGDDGSELSTEYQRDAAGRLLV 990 Query: 235 LVSTEGATEWCAEYDEWGNLLNEENPH 261 +G+ YD G L++ ++ H Sbjct: 991 KTLADGSAI-HYRYDALGRLVSVDDGH 1016 Score = 66.0 bits (159), Expect = 3e-09, Method: Composition-based stats. Identities = 56/295 (18%), Positives = 99/295 (33%), Gaps = 60/295 (20%) Query: 6 RIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPL 65 R+ YRYD GR + + + Y +D+ +RL T A Sbjct: 818 RLPDGGQRKYRYDALGRQITRQE---------ETGAITHYQWDAANRLAQATLPGGATRA 868 Query: 66 VESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQN----DRTR 121 + Y+ G+ A+R ++T Y + D L + D ++ Sbjct: 869 ----FSYNAYGKVTAER--------------DELGRITRYEY-ADNLHLVSRRINPDGSQ 909 Query: 122 IQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLE 181 ++ Y + L +E GE S +++G + + + Q+L + E Sbjct: 910 LRYRYD-NARLLLTEIENERGEHYHLDYYSNGLIQRETGFDGRSTAYEYDLNGQLLKKTE 968 Query: 182 SEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGA 241 +S E +R A+ L V+ + + Y D G +++ +G Sbjct: 969 FGDDGSELSTEYQR-DAAGRLLVKTLADGSAI---------HYRYDALGRLVSV--DDGH 1016 Query: 242 TEWCAEYDE----------WGNLLNEENPHQLQQLIRLPGQQYDEESGLYYNRHR 286 EYD WG L E + + RLP + S L Y+ R Sbjct: 1017 WPLAYEYDLQDRLITEHQGWGTLRYEYDTVGQLKHCRLP-----DGSKLDYHHQR 1066 Score = 59.8 bits (143), Expect = 2e-07, Method: Composition-based stats. Identities = 55/286 (19%), Positives = 85/286 (29%), Gaps = 37/286 (12%) Query: 5 NRIARDA-HYLYRYD-RHGRLTEK---------TDLIPEGVIRTD---DERTHRYHYDSQ 50 RI D YRYD LTE D G+I+ + D R+ Y YD Sbjct: 901 RRINPDGSQLRYRYDNARLLLTEIENERGEHYHLDYYSNGLIQRETGFDGRSTAYEYDLN 960 Query: 51 HRLVHYTRTQYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVT------W 104 +L+ T + + Y D GR + K + + +L R V Sbjct: 961 GQLLKKTEFGDDGSELSTEYQRDAAGRLLVKTLADGSAIHYRYDALGRLVSVDDGHWPLA 1020 Query: 105 YGWD-GDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGED 163 Y +D DRL T ++ Y+ + L G L Sbjct: 1021 YEYDLQDRLITEHQGWGTLR--YEYDTVGQLKHCRLPDGSKL-DYHHQRGGQLGSIDLNG 1077 Query: 164 GGSVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKI-- 221 + R + +L+ +E R A ++ Y + Sbjct: 1078 SRLTTHQFSAGREQQRQQGLLLSQYQYDEQGRLQAHSVSQQDRHLFHRHYAYDANGNLAG 1137 Query: 222 --------HLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEEN 259 YH D L++ G T +D GNLL + + Sbjct: 1138 VNDSRKGNRSYHYDPL---DRLINVRGTTPESFAHDPAGNLLGQGD 1180 Score = 49.4 bits (116), Expect = 3e-04, Method: Composition-based stats. Identities = 42/288 (14%), Positives = 75/288 (26%), Gaps = 45/288 (15%) Query: 4 DNRIARDAHYLYRYDRH----GRLTEKTDLIPEGVIRTDDERTHR---YHYDSQHRLVHY 56 DN R Y DRH ++ D +G + Y Y+ + +LV Sbjct: 548 DNNAGRSLLLRYE-DRHIVAVDYQQQRPDYTDQGERQDPWATVQTLVTYQYNVKGQLVSA 606 Query: 57 TRTQYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGW--------- 107 T Y Y+ + +R K + + W Sbjct: 607 TTAAGES----EHYRYNEQ-NVIQERQLAGGASFFWEWENEGKSSRSIHHWANFSQMDSR 661 Query: 108 ----DGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGED 163 D ++T + D + ++ + LI T G + + L Sbjct: 662 YIWDDAGQVTVLNADGSEQVYVHDENA--RLISETTPDGAETQ-KAYDEKGRLIAEKDPL 718 Query: 164 GGSVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHL 223 G + +L L E R +++ + Sbjct: 719 GAITEYRYDEDGLLIALIPPEDEPVAYEYHRGFVSDVRRGKATWK--------------- 763 Query: 224 YHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRLPG 271 Y + +G +G YD G LL +P + + G Sbjct: 764 YQRNEQGDITVQTDPDGNET-HYSYDLRGRLLEIRHPDGSRHQLGWNG 810 >UniRef50_Q1I7Q5 Putative uncharacterized protein n=11 Tax=Pseudomonas RepID=Q1I7Q5_PSEE4 Length = 1595 Score = 218 bits (555), Expect = 4e-55, Method: Composition-based stats. Identities = 95/347 (27%), Positives = 129/347 (37%), Gaps = 83/347 (23%) Query: 4 DNRIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAE 63 DNR+ + ++YD G L R + + +D RL HY + Sbjct: 1151 DNRLRQFDGTHFKYDERGNLI----------HRLREGKHAHLAWDLFDRLAHYNDDR--- 1197 Query: 64 PLVESRYLYDPLGRRVAKR----VWRRERDLTGWMSLSR-------KPQVTWYGWDGDRL 112 ++ Y YD LGRR+ K W + TGW + R K T +GWDG+ L Sbjct: 1198 --LKVEYSYDALGRRLHKHSVAHYWDKPDAGTGWNQMQRAKRQRELKCGFTLFGWDGNAL 1255 Query: 113 TTIQND-------RTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGG 165 + + + +Y PGSF P+ + R+ L + G Sbjct: 1256 AWESSPARDDGDTGSTVHYLYLPGSFVPVAQA-----------VRNGPVRLHKRPDWSGR 1304 Query: 166 SVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYH 225 F + Q D I Y Sbjct: 1305 EYDFEQDPLW----------------------------------QTDVKPQAFDSIFWYQ 1330 Query: 226 CDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPH----QLQQLIRLPGQQYDEESGLY 281 CDH G P+ L EG W A Y WG+L + IR GQ D+E+GL+ Sbjct: 1331 CDHLGTPMELTDEEGHVVWAAHYKAWGDLAELPGSSVAMSNARNPIRFQGQYQDQETGLH 1390 Query: 282 YNRHRYYDPLQGRYITQDPIGLKGGWNFYQY-PLNPVQYIDSMGLAS 327 YNR RYYDP RY+++DPIG GG N Y Y +PV D MGL S Sbjct: 1391 YNRFRYYDPKSARYVSKDPIGFMGGANAYTYTGGSPVTATDPMGLKS 1437 Score = 54.8 bits (130), Expect = 7e-06, Method: Composition-based stats. Identities = 54/313 (17%), Positives = 101/313 (32%), Gaps = 53/313 (16%) Query: 3 PDNRIARDAH-YLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQY 61 P R+ H +D+ GRL + +E + YD RL+ T Sbjct: 842 PSERVDATEHTLRCHWDKLGRLV---------GLDNQNESRATFSYDVVGRLLAETGFDG 892 Query: 62 AEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVT----------WYGWDGD- 110 + +Y YDPL R+A + R + + R + T Y ++G+ Sbjct: 893 ----LVKQYHYDPLTGRLAHTQVGQRRITMRFDRMGRLIERTASLGEQVESEHYAYNGNG 948 Query: 111 RLTTIQNDRTRIQTIYQPG-----SFTPLIRVETATGELAKTQRRSLADTLQ--QSGGED 163 +L +N + +Q + + + T + + + L + + G Sbjct: 949 QLLQARNAASLLQWFHDEAGNMVREHQHYLAIGTPMVAVWQHEYDVLNRRVATLRPDGHK 1008 Query: 164 GGSVVFPPVLVQMLDRLESEILADRVSEESRRWL-------------ASCGLTVEQMQNQ 210 + + + + E+LA + R + + G +EQ+ Sbjct: 1009 VSWLTYGSGHLLGMMLDHHEMLAFERDDLHREIVRHQGNKLMHKQQWSMRGRPLEQVIGG 1068 Query: 211 MDPVYTPARKIHLYHCDHRGLPLALVST-EGATEWCAEYDEWGNLLNEENPHQLQQLIRL 269 D T ++ + Y D G + T G +YD G LL + ++ Sbjct: 1069 ADGETTLLKRGYEY--DTVGQLAGIHDTRRGQLT--YQYDPLGRLLQANSRLGVET-FSF 1123 Query: 270 --PGQQYDEESGL 280 G DE L Sbjct: 1124 DPAGNLVDEALQL 1136 Score = 52.5 bits (124), Expect = 3e-05, Method: Composition-based stats. Identities = 44/257 (17%), Positives = 73/257 (28%), Gaps = 31/257 (12%) Query: 14 LYRYDRHGRLTEKTDLIPEGV-----------IRTDDERTHRYHYDSQHRLVHYTRTQYA 62 + YD GRL + T+ + E V + D+ R+ D++ RL Sbjct: 771 QWAYDEFGRLVQATNAMGEQVQYAYKAGQLAKVTHPDQTEERFERDAEGRL--LAHVDAL 828 Query: 63 EPLVESRYLYDPLG----RR-----VAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLT 113 + Y P G R + W + L G + + Y G L Sbjct: 829 DRCTTWSYT--PAGLPSERVDATEHTLRCHWDKLGRLVGLDNQNESRATFSYDVVGRLLA 886 Query: 114 TIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVL 173 D Q Y P + L T G+ T R L + G V Sbjct: 887 ETGFDGLVKQYHYDPLT-GRLA--HTQVGQRRITMRFDRMGRLIERTASLGEQV----ES 939 Query: 174 VQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPL 233 ++L R + +W + + + TP + + D + Sbjct: 940 EHYAYNGNGQLLQARNAASLLQWFHDEAGNMVREHQHYLAIGTPMVAVWQHEYDVLNRRV 999 Query: 234 ALVSTEGATEWCAEYDE 250 A + +G Y Sbjct: 1000 ATLRPDGHKVSWLTYGS 1016 Score = 49.8 bits (117), Expect = 3e-04, Method: Composition-based stats. Identities = 49/287 (17%), Positives = 82/287 (28%), Gaps = 62/287 (21%) Query: 2 WPDNRIARDAHY-----LYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHY 56 + + I R +D G D R +D+ RL Sbjct: 561 YQHHLITRYTDRTGRGQHLEWDGSG-----PHARAIREWADDGSFETRLAWDTHIRLTTV 615 Query: 57 TRTQYAEPLVESRYLYDPLGR--RVAKRVWR-----RERDLTGWMSLSRKPQVTWYGWD- 108 T ++R+ YD G R+ R R+ L Y +D Sbjct: 616 TDAHGG----QTRHYYDAEGYTYRIQHADGRSEWLFRDTRKNVIRHLHADGGQDRYVYDE 671 Query: 109 -GDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSV 167 +RL I+ D + + Y LI++ A G L + ++ + Sbjct: 672 RSNRLQHIRADHSVVHYAYDDQ--DQLIKLLDAEGGLWRRDYDAVGN------------- 716 Query: 168 VFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCD 227 LV+ +D L ++ +E + + N+ Y A ++ Y Sbjct: 717 -----LVETVDPLGNK------TEFAYTSTGQLKAIKDANGNEKKLAYNAAGQLLEY--- 762 Query: 228 HRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRL-PGQQ 273 G YDE+G L+ N Q GQ Sbjct: 763 --------TDCSGK-SSQWAYDEFGRLVQATNAMGEQVQYAYKAGQL 800 Score = 47.1 bits (110), Expect = 0.002, Method: Composition-based stats. Identities = 45/283 (15%), Positives = 86/283 (30%), Gaps = 32/283 (11%) Query: 6 RIARDAHYLYRYDRHGR--LTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAE 63 R A Y + GR L++ + + + D + + + Sbjct: 473 RNGVGATLHYEHFHEGRPVLSDINTYQDDDPTKVHLQLGTLL--DEHGHIQGLWQVVDGK 530 Query: 64 PLVESR-YLYDPLGRRVAKR-----VWRRERDLTGWMSLSRKPQVTWYG-WDGD----RL 112 PL + Y YD G +A + W+ + + + + WDG R Sbjct: 531 PLRQLCAYHYDDHGDLIAAQDEHGAAWQYQYQHHLITRYTDRTGRGQHLEWDGSGPHARA 590 Query: 113 TTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPV 172 D +T + L V A G + + T + + +F Sbjct: 591 IREWADDGSFETRLAWDTHIRLTTVTDAHGGQTRHYYDAEGYTYRIQHADGRSEWLFRDT 650 Query: 173 LVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLP 232 ++ L ++ DR ++ N++ + +H + D Sbjct: 651 RKNVIRHLHADGGQDRY-------------VYDERSNRLQHIRADHSVVHYAYDDQD-QL 696 Query: 233 LALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRL--PGQQ 273 + L+ EG W +YD GNL+ +P + GQ Sbjct: 697 IKLLDAEGGL-WRRDYDAVGNLVETVDPLGNKTEFAYTSTGQL 738 >UniRef50_D0KEV6 RHS protein n=2 Tax=Enterobacteriaceae RepID=D0KEV6_PECWW Length = 1348 Score = 215 bits (548), Expect = 2e-54, Method: Composition-based stats. Identities = 88/345 (25%), Positives = 129/345 (37%), Gaps = 67/345 (19%) Query: 10 DAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEP----- 64 + Y YD GRLT D R+ +D H L+ + Q Sbjct: 937 TGDHRYEYDALGRLTRSGD--------------ERFAFDPAHNLLSSAQAQPLPDNRLQV 982 Query: 65 LVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQT 124 + R+ YD G K + R W + + + + T +T Sbjct: 983 FEDKRWKYDNFGNVAEKHIGRHTVQQFSWNAEHQLAE-----------AISTRNGTAQRT 1031 Query: 125 IYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEI 184 Y +F ++S D + + +RL SEI Sbjct: 1032 TYGYDAFG------------------------RRSWKRDTFGITH---FIWDGNRLLSEI 1064 Query: 185 LADRVSEESRRWLA-SCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATE 243 R W+ G + +++ YH D GLP + +G Sbjct: 1065 CGSR----HHLWIYGDEGFAPLAQVSLQQGETEHEAQVYWYHNDVSGLPREMTGQDGGLV 1120 Query: 244 WCAEYDEWGNLLNEE-----NPHQLQQLIRLPGQQYDEESGLYYNRHRYYDPLQGRYITQ 298 W AEY WGN + E + + Q +R GQ +D E+GL+YNR RYYDP GR+++Q Sbjct: 1121 WRAEYRVWGNTVRVEQVEVPHSEPIHQPLRYQGQYFDAETGLHYNRFRYYDPDAGRFVSQ 1180 Query: 299 DPIGLKGGWNFYQYPLNPVQYIDSMGLASKYGHLNNGGYGARPNK 343 DPIGL GG N YQY NP+ +ID +GL G ++ G K Sbjct: 1181 DPIGLAGGINLYQYAPNPITWIDPLGLTPCMGLPSSRKAGGTGGK 1225 Score = 57.5 bits (137), Expect = 1e-06, Method: Composition-based stats. Identities = 48/253 (18%), Positives = 77/253 (30%), Gaps = 31/253 (12%) Query: 9 RDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAE-PLVE 67 Y +D G L +T+ +G R RT RY D+ RL+ + + Sbjct: 732 DGNTTRYEFDDGGYLQARTE---DGDGRGPGIRT-RYQRDAAGRLLEKLTARSGDARWQR 787 Query: 68 SRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQ 127 +RY YD LGR +A +L + + T + YQ Sbjct: 788 TRYGYDALGRLIAGVNHGGRVELEWDDAGQLTAERTL------------TRGVSHELSYQ 835 Query: 128 PGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILAD 187 G K LQ + G S L + + R + I +D Sbjct: 836 YDELGNCTHTRLPDGHELKHFYYGSGHRLQVNLGSRVISESERDTLHREVRRTQGAITSD 895 Query: 188 RVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVST-EGATEWCA 246 V +E R ++ + D V+ ++ + +V G Sbjct: 896 YVHDEMGRLVSQRAGGEGKTTVARDYVWRRDGQL-----------MQMVDKYTGDH--RY 942 Query: 247 EYDEWGNLLNEEN 259 EYD G L + Sbjct: 943 EYDALGRLTRSGD 955 Score = 54.8 bits (130), Expect = 7e-06, Method: Composition-based stats. Identities = 33/196 (16%), Positives = 48/196 (24%), Gaps = 27/196 (13%) Query: 8 ARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVE 67 AR Y YD GRL + +D +L RT E Sbjct: 783 ARWQRTRYGYDALGRLIA----------GVNHGGRVELEWDDAGQLT-AERTLTRGVSHE 831 Query: 68 SRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQ 127 Y YD LG R+ + + QV G R+ + T + Sbjct: 832 LSYQYDELGNCTHTRLPDGHELKHFYYGSGHRLQVNL----GSRVISESERDTLHR---- 883 Query: 128 PGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILAD 187 V G + L G V D +++ Sbjct: 884 --------EVRRTQGAITSDYVHDEMGRLVSQRAGGEGKTTVARDYVWRRDGQLMQMVDK 935 Query: 188 RVSEESRRWLASCGLT 203 + + A LT Sbjct: 936 YTGDHRYEYDALGRLT 951 Score = 52.9 bits (125), Expect = 3e-05, Method: Composition-based stats. Identities = 50/275 (18%), Positives = 78/275 (28%), Gaps = 42/275 (15%) Query: 11 AHYLYRYDRHGRLTEKTDLIPEGVIRTDDER------------THRYHYDSQHRLVHYTR 58 Y YD G L D I D+R + ++S LV +T Sbjct: 545 GTREYHYDIAGNLIRMMDEIGRITEYNHDDRGNLVRIRDAAAGVQQLCWNSADFLVSHTD 604 Query: 59 TQYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGD-------- 110 + + YD G + ++ T + +PQ + DG Sbjct: 605 CSG----RITTFEYDKYG-WLKQQTDAAGHHTTLYHGRDGQPQRVVHA-DGSTERAEFDR 658 Query: 111 --RLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVV 168 RLT + + +I PL R + ++ A L E+G Sbjct: 659 WRRLTAWHDAQGQITRWTLAADGLPLTRTDALGHQVG--YEYDHARRLTALINENGARHT 716 Query: 169 FPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDH 228 F L + + R+ G ++ D P + Y D Sbjct: 717 FSYDARDNL------VCERGFDGNTTRYEFDDGGYLQARTEDGDGR-GPGIRTR-YQRDA 768 Query: 229 RGLPLA-LVSTEGATEW---CAEYDEWGNLLNEEN 259 G L L + G W YD G L+ N Sbjct: 769 AGRLLEKLTARSGDARWQRTRYGYDALGRLIAGVN 803 Score = 51.7 bits (122), Expect = 5e-05, Method: Composition-based stats. Identities = 46/273 (16%), Positives = 73/273 (26%), Gaps = 35/273 (12%) Query: 14 LYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYLYD 73 YRYD G T ++ D +T R+ Y + L Y YD Sbjct: 505 RYRYDERGNCTAVSE---------PDGQTTRFDYHERWNLPVRVTDMLGGTR---EYHYD 552 Query: 74 PLGRRVAK-------RVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTIY 126 G + + + V W+ D + T + Sbjct: 553 IAGNLIRMMDEIGRITEYNHDDRGNLVRIRDAAAGVQQLCWNSADFLVSHTDCSGRITTF 612 Query: 127 QPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILA 186 + + L + +T T Q+ DG + + L Sbjct: 613 EYDKYGWLKQ-QTDAAGHHTTLYHGRDGQPQRVVHADGSTERAEFDRWRRLTAW-----H 666 Query: 187 DRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWCA 246 D + +R LA+ GL + + V Y DH AL++ GA Sbjct: 667 DAQGQITRWTLAADGLPLTRTDALGHQVG--------YEYDHARRLTALINENGARH-TF 717 Query: 247 EYDEWGNLLNEENPHQLQQLIRL-PGQQYDEES 278 YD NL+ E G + Sbjct: 718 SYDARDNLVCERGFDGNTTRYEFDDGGYLQART 750 >UniRef50_Q7MDR0 Rhs family protein n=3 Tax=Vibrio vulnificus RepID=Q7MDR0_VIBVY Length = 1498 Score = 215 bits (547), Expect = 3e-54, Method: Composition-based stats. Identities = 89/347 (25%), Positives = 132/347 (38%), Gaps = 32/347 (9%) Query: 14 LYRYDRHGRLTE----------KTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAE 63 + YD GR+ + D I + + R+ +YHYD+ H+L Sbjct: 820 HFDYDSMGRICSVYYGQDQEQKRFDGIGRLSQQQWNNRSRKYHYDTAHQLA----IIIDS 875 Query: 64 PLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQN----DR 119 S Y YD LG+ + + + + + S + GDRL Sbjct: 876 VQGASHYQYDSLGQ-LTRAKTAHQEETYRFDSFGNPSEADCLLM-GDRLVEHNGWRFQYD 933 Query: 120 TRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDR 179 I G + R A +L + + + V + + Sbjct: 934 AHGNQICAEGEGSAQYRCFNALNQLVQVDSDGVLSHFEYDALGRRSRKVTESGTTEFIW- 992 Query: 180 LESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTE 239 + L RW + + D + + Y CD G PLALV + Sbjct: 993 -QGSQLIGEYHNGKYRWYFYLPNSHTPIMLVED------EQCYFYQCDQIGTPLALVDEQ 1045 Query: 240 GATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEESGLYYNRHRYYDPLQGRYITQD 299 G+ W A YD +G E + +R GQ +D E+GL+YN RYYDP GR+I D Sbjct: 1046 GSVVWQARYDTYGRAHIE--VESVGNPLRFQGQYHDVETGLHYNLARYYDPRTGRFIQPD 1103 Query: 300 PIGLKGGWNFYQYPLNPVQYIDSMGLASKYGH--LNNGGYGARPNKP 344 PIGL GG N YQY NPV ++D GL +K G + G +P +P Sbjct: 1104 PIGLLGGINHYQYAPNPVMWVDPHGLCAKEGSPAIKAGVNDTQPQQP 1150 Score = 64.4 bits (155), Expect = 8e-09, Method: Composition-based stats. Identities = 28/138 (20%), Positives = 47/138 (34%), Gaps = 30/138 (21%) Query: 4 DNRIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAE 63 +R+ + ++YD HG + +++ ++LV Q Sbjct: 919 GDRLVEHNGWRFQYDAHGNQI----------CAEGEGSAQYRCFNALNQLV-----QVDS 963 Query: 64 PLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQ 123 V S + YD LGRR K + T + W G +L ++ Sbjct: 964 DGVLSHFEYDALGRRSRKVT---------------ESGTTEFIWQGSQLIGEYHNGKYRW 1008 Query: 124 TIYQPGSFTPLIRVETAT 141 Y P S TP++ VE Sbjct: 1009 YFYLPNSHTPIMLVEDEQ 1026 Score = 52.9 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 43/272 (15%), Positives = 84/272 (30%), Gaps = 38/272 (13%) Query: 12 HYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYL 71 + + ++ HG+L+ K R+ + R R+ YD RLV + Y Sbjct: 415 QWSFEHNAHGKLSSK---------RSPEGREWRWEYDDNGRLVRAIQPSGE----TVCYQ 461 Query: 72 YDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTW-------YGWDGDRLTTIQNDRTRIQT 124 Y+ G++ +R + +L ++ + + ++ L T +D +T Sbjct: 462 YNAYGQKTKERHSSGATTGYQYNALGQQTAIRYPNGSLEQRQYNILGLLTALSDANGKRT 521 Query: 125 IYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEI 184 + F LI + + GE + + + + + LD + Sbjct: 522 DCRYDKFGRLIERKASDGESHQWWWNDAHQMIAHQA--NQTLLRYSYNQEHRLDGIAFPN 579 Query: 185 LADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEW 244 E + T + + V Y D G L++ G Sbjct: 580 GMVTAFEHDTNGHLTKTFTYSEEDDLQHEVR--------YRYDECGRVTHLITPAGT--- 628 Query: 245 CAEYDEWGNLLNEE---NPHQLQQLIRLPGQQ 273 EWG L P + R G++ Sbjct: 629 --STIEWGLLAQPNAIIRPDGGELAFRYDGER 658 Score = 47.5 bits (111), Expect = 0.001, Method: Composition-based stats. Identities = 41/302 (13%), Positives = 85/302 (28%), Gaps = 45/302 (14%) Query: 9 RDAHYLYRYDRHGRLTEKTDLIP------------EGVIRTDDERTHRYHYDSQHRLVHY 56 +RYD L + + D T +Y+YD RL Sbjct: 646 DGGELAFRYDGERNLVGISRSDACDFLFTLSPDDYVTETQNFDGVTTQYYYDLAGRL--- 702 Query: 57 TRTQYAEPLVESRYLYDPLGRR----------VAKRVWRRERDLTGWMSLSRKPQVTWYG 106 ++ + + YD G V++ ++ ++ ++ + + Sbjct: 703 --SRLESCESQVVFSYDAEGNLCLVKAGATHGVSENRYQFSHGSQLRLATNQACTIQYQY 760 Query: 107 WDGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGS 166 G +L+ + RI + + L ++ A G + S GE Sbjct: 761 SSGGQLSQQIQGQHRIGYYH--NASGQLSQLCLADGSQVNYAYTAYGQLAAISMGEKPPC 818 Query: 167 VVFPPVLVQML-----DRLESEILADRVSEES-RRWLASCGLTVEQMQNQMDPVYTPARK 220 V F + + + + + D + S ++W +Q+ + + Sbjct: 819 VHFDYDSMGRICSVYYGQDQEQKRFDGIGRLSQQQWNNRSRKYHYDTAHQLAIIIDSVQG 878 Query: 221 IHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEE-----NPHQLQQLIRLPGQQYD 275 Y D G + +D +GN + + R QYD Sbjct: 879 ASHYQYDSLGQLTRAKTAHQEET--YRFDSFGNPSEADCLLMGDRLVEHNGWRF---QYD 933 Query: 276 EE 277 Sbjct: 934 AH 935 Score = 44.8 bits (104), Expect = 0.007, Method: Composition-based stats. Identities = 37/247 (14%), Positives = 68/247 (27%), Gaps = 23/247 (9%) Query: 34 VIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGW 93 IR + + YD + LV V + Y YD A + + + Sbjct: 298 GIRYNKQHCAELQYDRRGHLVEVRLPD--SGKVLASYQYDAQDNLTAATNQHGQTESYFY 355 Query: 94 MS---LSRKPQV----TWYGWDGD----RLTTIQNDRTRIQTIYQPGSFTPLIRVE---- 138 L R+ + ++ W + + D + T R Sbjct: 356 SESHLLKRRQRQSGFSHYFEWSAEGPEAKCLRNYGDDGTYDYQFYYQDETSSYRDTLGHQ 415 Query: 139 ---TATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSEESRR 195 + +RS + +D G +V + + ++E Sbjct: 416 WSFEHNAHGKLSSKRSPEGREWRWEYDDNGRLVRAIQPSGETVCYQYNAYGQK-TKERHS 474 Query: 196 WLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLL 255 A+ G + Q Y P + + GL AL G YD++G L+ Sbjct: 475 SGATTGYQYNALGQQTAIRY-PNGSLEQRQYNILGLLTALSDANGKRT-DCRYDKFGRLI 532 Query: 256 NEENPHQ 262 + Sbjct: 533 ERKASDG 539 >UniRef50_C5CXA7 YD repeat protein n=1 Tax=Variovorax paradoxus S110 RepID=C5CXA7_VARPS Length = 1434 Score = 215 bits (547), Expect = 3e-54, Method: Composition-based stats. Identities = 99/324 (30%), Positives = 135/324 (41%), Gaps = 59/324 (18%) Query: 6 RIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPL 65 R + Y +DR G LT +T R ++ +D+ RL + Sbjct: 1053 REGEHEGWHYVFDRAGNLTSRTQ------TRAPNQPALHLAWDTNQRLTQSRWERGPHHG 1106 Query: 66 VESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTI 125 + Y YDPLGRRV KR TW+ WDGD L Sbjct: 1107 EVTTYGYDPLGRRVFKR---------------NTTHTTWFFWDGDALLGE---------A 1142 Query: 126 YQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEIL 185 Q + P + T L +RR D L+Q + V+ P E L Sbjct: 1143 CQENALVPKTKKSPVTSLL---ERRKQEDALRQLHAKTREFVLKPGTF-------EPLAL 1192 Query: 186 ADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWC 245 D+ E + +D AR +H YH D G PL + + +G W Sbjct: 1193 IDK----------------EMPPSSVDTSEDTARVLH-YHNDPDGRPLRMTTRDGQIVWA 1235 Query: 246 AEYDEWGNLLNEENPHQLQQLIRLPGQQYDEESGLYYNRHRYYDPLQGRYITQDPIGLKG 305 YD WG + ++ L Q IR GQQ D E+GL+YNRHRY+DP+ G Y++ DPIGL+G Sbjct: 1236 VRYDVWGGIA-RKDCELLAQPIRCQGQQEDAETGLFYNRHRYFDPIIGAYVSADPIGLRG 1294 Query: 306 GWNFYQY-PLNPVQYIDSMGLASK 328 G N Y Y NP +ID +GLA+ Sbjct: 1295 GVNPYAYGCSNPYFWIDPLGLAAS 1318 Score = 50.6 bits (119), Expect = 1e-04, Method: Composition-based stats. Identities = 52/294 (17%), Positives = 78/294 (26%), Gaps = 51/294 (17%) Query: 10 DAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESR 69 D + YD GR T G +RT + YD++ L+ + +V Sbjct: 545 DGVTTFEYDDVGRTVAVT---APGGLRTG------FTYDARGNLLGVRHPDGS--IVGCE 593 Query: 70 YLY--------DPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGD-RLTTIQNDRT 120 Y DPLG R R + L VT + D +L N R Sbjct: 594 YDSDDQLLAVIDPLGHRWEHASDARGLPSSQTDPLG---AVTRFEHDDRGQLVRHVNARG 650 Query: 121 RIQTIYQPG-----------------SFTPLIRVETATGELAKTQRR--SLADTLQQSGG 161 + + + L R+ T L + R LQ+ Sbjct: 651 AVTQLRYDRYGLPAQMIDALTHVTRFDYDALGRLRTQVNALGQRSRYHCDAKGRLQRITQ 710 Query: 162 EDGGSVVFPPVLVQMLDRLESE--------ILADRVSEESRRWLASCGLTVEQMQNQMDP 213 DG + L R E + + + Q+ Sbjct: 711 HDGAQLTCAYDAEDRLVRYADENGAITELTYSGTGLIARRVQPDGHAVRYDYDSEEQLVA 770 Query: 214 VYTPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLI 267 V P + H D G + + G YD G LL +P Sbjct: 771 VVNPRGERHELTRDPLGRIVEEIDYWGQCR-RFHYDASGRLLRSIDPMGRTISF 823 Score = 49.0 bits (115), Expect = 4e-04, Method: Composition-based stats. Identities = 49/299 (16%), Positives = 82/299 (27%), Gaps = 53/299 (17%) Query: 9 RDAHYLYRY-DRHGRLTEKTDLIPEGVIRT--DDERTHRYHYDSQHRLVHYTRTQYAEPL 65 L RY D +G +TE T + R D RY YDS+ +LV + Sbjct: 721 DAEDRLVRYADENGAITELTYSGTGLIARRVQPDGHAVRYDYDSEEQLVAVVNPRGERHE 780 Query: 66 VE-----------------SRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTW---- 104 + R+ YD GR + ++ R TW Sbjct: 781 LTRDPLGRIVEEIDYWGQCRRFHYDASGRLLRSIDPMGRTISFHTDAMGRITHKTWPEIS 840 Query: 105 ---------YGWD-GDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLAD 154 + +D RL +N + ++ + L VE G + A Sbjct: 841 GGAPAGAEDFRYDAAGRLVEARNAHS--HFKHRFDALGHL--VEEQQGSFRIERAYDAAG 896 Query: 155 TLQQSGGEDGGSVVFPPVLVQMLDR----------LESEILADRVSEESRRWLASCGLTV 204 + G V L+ +E L +E + Sbjct: 897 NSVERKTSAGNRVAVRYDLLNRPAEIAINDEPPITIERNALGQATAEHLSEHVVRTLRYN 956 Query: 205 EQMQNQMDPVYTPARKIH--LYHCDHRGLPLALVST-EGATEWCAEYDEWGNLLNEENP 260 +Q V + + D G + +G +D G +L+ +P Sbjct: 957 DQGLVAAQAVAKDGAPLFDTRFDYDAAGNLTRRTDSQQGNDL--YTHDPMGRILSHVDP 1013 >UniRef50_C7MXD3 Rhs family protein n=1 Tax=Saccharomonospora viridis DSM 43017 RepID=C7MXD3_SACVD Length = 1485 Score = 215 bits (546), Expect = 4e-54, Method: Composition-based stats. Identities = 89/358 (24%), Positives = 143/358 (39%), Gaps = 32/358 (8%) Query: 4 DNRIARDAHYLYRYDRHGRLTEKTDLIPEGV------IRTDDERTHRYHYDSQHRLVHYT 57 + R+ A ++DR+GRL +++ I +G R +R++RY D + V T Sbjct: 1018 ERRLDNGATIAQQWDRNGRLIDQSISIADGTPTVPPRYRLLQQRSYRYGPDGSPQAVDDT 1077 Query: 58 RT--------------QYAEPLVESRYLYDPLGR-RVAK-----RVWRRERDLTGWMSLS 97 T Q A P + +Y YD G R A + G + Sbjct: 1078 STGTVRLQLDGTGRVRQVAGPGGQEQYSYDRAGNIRNASWHTPSGHGQHSYAYDGTRLTT 1137 Query: 98 RKPQVTWYGWDGDRLTTI--QNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADT 155 Y G +T + + T ++ Y + L+ V T G + +L Sbjct: 1138 AGNVRYTYDRQGRVVTKVRYEAGGTTLRWHYTWNAEDRLVEVGTPDGSRWRYLYDALGRR 1197 Query: 156 LQQSG-GEDGGSVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPV 214 + + DG +VV + RL ++LA V + W + Q++ ++ P Sbjct: 1198 IAKHKLAPDGSTVVERTEFIWDGVRLAEQVLA-GVDATTWEWHPRRFRPLTQIRRRLSPA 1256 Query: 215 YT-PARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQ 273 H D G L+ G W WG + + + R PGQ Sbjct: 1257 KQWVGGDFHAVITDGIGTSTELLDGSGNLAWRNRTTLWGKTVIKHHGSA-STPWRFPGQY 1315 Query: 274 YDEESGLYYNRHRYYDPLQGRYITQDPIGLKGGWNFYQYPLNPVQYIDSMGLASKYGH 331 D E+GL+YN HRYYDP GRY++ DP+GL+ N Y Y +NP++++D +GL S Sbjct: 1316 SDPETGLHYNYHRYYDPDTGRYVSCDPLGLRPSPNHYAYVVNPLRWLDPLGLMSCGDD 1373 Score = 72.1 bits (175), Expect = 4e-11, Method: Composition-based stats. Identities = 57/255 (22%), Positives = 80/255 (31%), Gaps = 22/255 (8%) Query: 14 LYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYLYD 73 YRYD G L E + R+ R+ YD Q RLV +T Y YD Sbjct: 527 RYRYDDAGLLAEVVNS---------SGRSLRFSYDDQSRLVRWTDRNGHW----YHYFYD 573 Query: 74 PLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQPGSFTP 133 GR VA + L+G S ++T + D +T+ + I + Sbjct: 574 DAGRCVANH--SSSKYLSGTFSYDPDNRITRFT-DALGHSTVYQLDAKGNVIAETDPLGH 630 Query: 134 LIRVETATGELAKTQRRSLADTLQQSGGEDGG-SVVFPPVLVQMLDRLESEILADRVSEE 192 E ++ L T + S +DG + V P Q L V + Sbjct: 631 TTTSEWDEHNRLISRTDPLGRTTRYSYDDDGNLTGVSGPDGTQSRAEYNEWGLPTSVVDP 690 Query: 193 SRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWG 252 + DP R Y D RG A+ G T EYD G Sbjct: 691 DGAVWRQSYDERGNRVSLTDPTGATTR----YSYDERGNATAITDALGQTR-RIEYDPAG 745 Query: 253 NLLNEENPHQLQQLI 267 L +P + Sbjct: 746 LPLAVTDPSGATRRF 760 Score = 71.4 bits (173), Expect = 7e-11, Method: Composition-based stats. Identities = 61/317 (19%), Positives = 85/317 (26%), Gaps = 64/317 (20%) Query: 3 PDNRIARDAHYL-----YRYDRHGRLTEKTDLIPEGVIRTDD------------ERTHRY 45 PDNRI R L Y+ D G + +TD + D RT RY Sbjct: 596 PDNRITRFTDALGHSTVYQLDAKGNVIAETDPLGHTTTSEWDEHNRLISRTDPLGRTTRY 655 Query: 46 HYDSQHRLVHYTRTQYAEPLVE-----------------SRYLYDPLGRRVAKRVWRRER 88 YD L + + E R YD G RV+ Sbjct: 656 SYDDDGNLTGVSGPDGTQSRAEYNEWGLPTSVVDPDGAVWRQSYDERGNRVS-------- 707 Query: 89 DLTGWMSLSRKPQVTWYGWDGDRLTTIQND--RTRIQTIYQPGSFTPLIRVETATGELAK 146 T Y +D T D + Y P PL T + Sbjct: 708 ------LTDPTGATTRYSYDERGNATAITDALGQTRRIEYDPAGL-PLAV--TDPSGATR 758 Query: 147 TQRRSLADTLQQSGGEDGGSVVFPPVLV-QMLDRLESEILADRVSEESRR----WLASCG 201 R + E G F + + R + +R + ++ G Sbjct: 759 RFERDHFGRITAIIDEVGAVTRFGWTVEGKRAWRTLPDGTTERWEYDGEGNEIAYVGPSG 818 Query: 202 LTVEQMQNQMD---PVYTPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEE 258 LT Q D V Y D A+ + G W E D GN++ E Sbjct: 819 LTRRISYTQFDLPVSVTDAEGNTLTYTYDPLLRLTAVTNAHG-LTWRYERDAAGNVVREI 877 Query: 259 NPHQLQQLIRL--PGQQ 273 + + GQ Sbjct: 878 DYDGREIRYFYDAAGQL 894 Score = 61.4 bits (147), Expect = 7e-08, Method: Composition-based stats. Identities = 42/261 (16%), Positives = 68/261 (26%), Gaps = 35/261 (13%) Query: 9 RDAHYLYRYDRHGRLTE-----------KTDLIPEGVIRTDDERTHRYHYDSQHRLVHYT 57 Y YD G+LT + DL V R +R + YD R++ T Sbjct: 880 DGREIRYFYDAAGQLTSRVNGAGETTTFRRDLSGRVVERRAQDRVSTFEYDPMGRMLSAT 939 Query: 58 RTQYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQN 117 P RY D GR +++++ + + Y G R+ + Sbjct: 940 -----SPDATVRYRRDARGRVLSEQI-------------NGHTVTSRYDALGRRVHRRTS 981 Query: 118 DRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQML 177 Y +R + T A + ++G ++ L Sbjct: 982 TGVESTWSYDVRGCPRELR----MADRMITFGFDGAGREIERRLDNGATIAQQWDRNGRL 1037 Query: 178 DRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVS 237 I + R L V + D G + Sbjct: 1038 IDQSISIADGTPTVPPRYRLLQQRSYRYGPDGSPQAVDDTSTGTVRLQLDGTGRVRQVAG 1097 Query: 238 TEGATEWCAEYDEWGNLLNEE 258 G YD GN+ N Sbjct: 1098 PGGQE--QYSYDRAGNIRNAS 1116 Score = 53.7 bits (127), Expect = 2e-05, Method: Composition-based stats. Identities = 48/270 (17%), Positives = 75/270 (27%), Gaps = 41/270 (15%) Query: 6 RIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPL 65 R A+D + YD GR+ T T RY D++ R++ Q Sbjct: 918 RRAQDRVSTFEYDPMGRMLSATSPDA----------TVRYRRDARGRVLS---EQINGHT 964 Query: 66 VESRYLYDPLGRRVAKRVWRRERDLTGWM------SLSRKPQVTWYGWD--GDRLTTIQN 117 V SR YD LGRRV +R + L ++ +G+D G + + Sbjct: 965 VTSR--YDALGRRVHRRTSTGVESTWSYDVRGCPRELRMADRMITFGFDGAGREIERRLD 1022 Query: 118 DRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQML 177 + I + + A G R L G DG Sbjct: 1023 NGATIAQQWDRNGRLIDQSISIADGTPTVPPRYRLLQQRSYRYGPDGSPQAVDDTST--- 1079 Query: 178 DRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKI------HLYHCDH--- 228 + R +A G + ++ + + H Y D Sbjct: 1080 ----GTVRLQLDGTGRVRQVAGPGGQEQYSYDRAGNIRNASWHTPSGHGQHSYAYDGTRL 1135 Query: 229 --RGLPLALVSTEGATEWCAEYDEWGNLLN 256 G +G Y+ G L Sbjct: 1136 TTAGNVRYTYDRQGRVVTKVRYEAGGTTLR 1165 Score = 44.8 bits (104), Expect = 0.008, Method: Composition-based stats. Identities = 49/308 (15%), Positives = 88/308 (28%), Gaps = 62/308 (20%) Query: 4 DNRIARD----AHYLYRYDRHGRLTEKTDLIPEG------------VIRTDDERTHRYHY 47 NR++ A Y YD G T TD + + + T R+ Sbjct: 703 GNRVSLTDPTGATTRYSYDERGNATAITDALGQTRRIEYDPAGLPLAVTDPSGATRRFER 762 Query: 48 DSQHRLVHYTRTQYAEP-----------------LVESRYLYDPLGRRVA--------KR 82 D R+ A R+ YD G +A +R Sbjct: 763 DHFGRITAIIDEVGAVTRFGWTVEGKRAWRTLPDGTTERWEYDGEGNEIAYVGPSGLTRR 822 Query: 83 VWRRERDLTGWMSLSRKPQVTWYGWD-GDRLTTIQNDRTRIQTIYQPGSFTPLIRVETAT 141 + + DL ++ + +T Y +D RLT + N + Y+ + ++R Sbjct: 823 ISYTQFDLPVSVTDAEGNTLT-YTYDPLLRLTAVTNAHG-LTWRYERDAAGNVVREIDYD 880 Query: 142 GELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSEESRRWLASCG 201 G + + + G G + F L ++ R + + Sbjct: 881 GREIRYFYDAAGQLTSRVNG-AGETTTFRRD-------LSGRVVERRAQDRVSTFEYDPM 932 Query: 202 LTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPH 261 + + V Y D RG L+ G T + YD G ++ Sbjct: 933 GRMLSATSPDATVR--------YRRDARGRVLSEQ-INGHTV-TSRYDALGRRVHRRTST 982 Query: 262 QLQQLIRL 269 ++ Sbjct: 983 GVESTWSY 990 >UniRef50_Q12LF3 YD repeat n=2 Tax=Shewanella denitrificans OS217 RepID=Q12LF3_SHEDO Length = 927 Score = 211 bits (538), Expect = 3e-53, Method: Composition-based stats. Identities = 85/352 (24%), Positives = 130/352 (36%), Gaps = 36/352 (10%) Query: 11 AHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRY 70 Y YD +G + + + ++ +++YD +RL TQ + Y Sbjct: 474 QQLSYAYDANGNIETINNTLFS-------RQSQQFNYDELNRL-----TQASGDYGSLNY 521 Query: 71 LYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQN--DRTRIQTIYQP 128 YD + R AK + G Y D ++L + Q + Sbjct: 522 AYDAVHNRTAKHALQ-----VGQAPAEVSIDSYTYAADSNQLQQVSKSAPGITTQRDFSY 576 Query: 129 GSFTPL-IRVETATGELAKTQRRSLADTLQQSGGE----------DGGSVVFPPVLVQML 177 + + ++ ++ DTL + + Sbjct: 577 DANGQIITDIDDTRALTLNYNAQNRLDTLTNNALPVAQYSYNALGQRVQKNVNGKVTHFH 636 Query: 178 DRLESEILADRVSE-ESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALV 236 L +++A+ +++ R G D + ++ H DH G P AL Sbjct: 637 YDLNGQLIAETLADGTLLREYFFAGRQQIATAITNDNQGSTTTYVYYVHTDHLGTPTALT 696 Query: 237 STEGATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEESGLYYNRHRYYDPLQGRYI 296 + G +W A Y +G + + + +++Q IR PGQ YDEESGL+YN R YDP GRYI Sbjct: 697 DSTGTVQWQAHYTPFGQTIVDID--KIKQAIRFPGQYYDEESGLHYNYFRDYDPELGRYI 754 Query: 297 TQDPIGLKGGWNFYQYPL-NPVQYIDSMGLA--SKYGHLNNGGYGARPNKPP 345 DPIGL GG N Y Y NPV D GL G L N GY Sbjct: 755 QSDPIGLAGGINTYGYAYQNPVMNTDPTGLWVPQAIGALVNMGYEGYTQYQS 806 Score = 51.0 bits (120), Expect = 1e-04, Method: Composition-based stats. Identities = 42/295 (14%), Positives = 82/295 (27%), Gaps = 48/295 (16%) Query: 5 NRIARD-----AHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRT 59 NR+ + Y Y+ ++T TD T Y YD +L+ T Sbjct: 236 NRVKQLKDAKLGQTQYSYNGKDQITSVTDAR---------GNTTSYEYDGLGQLLKTTSP 286 Query: 60 QYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTW---------YGWDGD 110 ++++YD G K + + +L+R + Y +D Sbjct: 287 DTG----ITQFVYDEAGNLTQKTDNKGNIVTYTFDALNRLLSAEFAAAPELNVNYSYDST 342 Query: 111 --------RLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGE 162 LT + + Y + + + + L+Q Sbjct: 343 DDDNHGLGLLTLMTDSSGTTAYRYNQQGQVISETRNILGADYITSYQYDVNSALKQMIYP 402 Query: 163 DGGSVVFPPVLVQMLDRLESE-ILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKI 221 G S+ + Q L + ++ ++ + + ++ + T + Sbjct: 403 SGRSLSYQYDNQQRLIAITTQSAISSQAQPLINNLSYKPFGPIASLRYGNNLTNTYNYDL 462 Query: 222 HLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQYDE 276 D L YD GN+ N +Q + YDE Sbjct: 463 DYQLIDINSGIQQL---------SYAYDANGNIETINNTLFSRQSQQFN---YDE 505 Score = 48.6 bits (114), Expect = 5e-04, Method: Composition-based stats. Identities = 38/278 (13%), Positives = 80/278 (28%), Gaps = 38/278 (13%) Query: 6 RIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPL 65 RI + Y+ +G+L+ T+ + + +YD+ Y + Sbjct: 42 RIDVSDVTRFDYNSNGQLSRITNAL--------GHKVEYQNYDAFG----YPQKIINANG 89 Query: 66 VESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTI 125 + YD LG + V R + T+ G L + Sbjct: 90 GQVTLTYDRLGNILTNTVHTRLG----------ANKTTYTYIVGTSLVQSIKNSANFTLT 139 Query: 126 YQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEIL 185 Y + L + + E + + A + S ++ + + D L I Sbjct: 140 YSYNNANQLTSINGSNRERIEFE-LDAAGNILSSKIKNTATNTLMYEHTRQYDELSRIIK 198 Query: 186 ADRVSEESRRWLA-SCGLTVEQMQNQMDPVYTPARKIH-------------LYHCDHRGL 231 + ++ + + G + +++P ++ Y + + Sbjct: 199 DVGAANQTTQIAYDAEGNPLSLTDAKLNPTEQTFDALNRVKQLKDAKLGQTQYSYNGKDQ 258 Query: 232 PLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRL 269 ++ G T EYD G LL +P Sbjct: 259 ITSVTDARGNTT-SYEYDGLGQLLKTTSPDTGITQFVY 295 >UniRef50_B2K1J9 YD repeat protein n=23 Tax=Yersinia RepID=B2K1J9_YERPB Length = 1494 Score = 210 bits (535), Expect = 7e-53, Method: Composition-based stats. Identities = 93/328 (28%), Positives = 135/328 (41%), Gaps = 74/328 (22%) Query: 10 DAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESR 69 D Y+ D+ G+L +TD + +R +++ RL + E Sbjct: 1107 DNGTAYQLDKAGQLVSRTDRFSQLALR----------WNTFGRLAGIKNEHH-----EHA 1151 Query: 70 YLYDPLGRRVAKRVWRRERDLTGWMSLSRKP----------QVTWYGWDGDRLTTIQNDR 119 Y YD LGRRV KR +R L + + K TW+ WDGD + Sbjct: 1152 YTYDALGRRVGKRHLQRPTKLLDGLRVIDKETPSRGEPVWQDETWFMWDGDVMVGE---- 1207 Query: 120 TRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDR 179 +Q P TP ++ + G V V D Sbjct: 1208 --LQREVAPRVVTP------------------------ETWDKPDGIVYSAQFYVYQPDS 1241 Query: 180 LESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTP--ARKIHLYHCDHRGLPLALVS 237 E L +Q+ D P +I+ Y D G+P+ L Sbjct: 1242 FEPRALQRY----------------QQVAEAEDGEIAPLGEEQIYFYQNDPNGMPIRLQD 1285 Query: 238 TEGATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEESGLYYNRHRYYDPLQGRYIT 297 EG W A++ +G L+ QL+Q +R+ GQ YD ESGL+YNR+RYYDP G +I+ Sbjct: 1286 GEGEVVWEAQFTPFGQ-LSVTGTSQLRQPLRMQGQYYDTESGLHYNRYRYYDPACGVFIS 1344 Query: 298 QDPIGLKGGWNFYQYPLNPVQYIDSMGL 325 QDPIGLKGG N YQ+ +N + ++D +GL Sbjct: 1345 QDPIGLKGGLNPYQFAVNTLGWVDPLGL 1372 Score = 57.1 bits (136), Expect = 2e-06, Method: Composition-based stats. Identities = 48/292 (16%), Positives = 79/292 (27%), Gaps = 37/292 (12%) Query: 6 RIARDAHYLYR--YDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAE 63 RI +R +D G++ +T T + + YD +LV Sbjct: 655 RITDPGGRFWRQSWDAQGKVISQT---------TPGKIATHFTYDDLGQLVAV----VDA 701 Query: 64 PLVESRYLYDPLG--RRVAKRVWRRERDLTGWMS-----LSRKPQVTWYGWDGDRLTTIQ 116 + YD G R + + ++ +T Y +D + T Sbjct: 702 SQQRTELAYDAWGFLRVITDARGNATSFKHDFCGNLLKKVAANGDITRYQYDKKQRLTGC 761 Query: 117 NDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQM 176 + L+ + G LQ DG + + Sbjct: 762 TLPDARTIRCEYDREDNLL-LYNENGSRITRFGYFGQGRLQSRTDPDGSLTEYLYDTEEQ 820 Query: 177 LDRLESEI---------LADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCD 227 L ++++ R+ EE W S G + + P +I CD Sbjct: 821 LIGVKNQRGETWQLKRNAEGRLIEEVDYWGQSRGYQ-YNAVGHLTGSHDPLGQILAVTCD 879 Query: 228 HRGLPLALVSTEGATEW-CAEYDEWGNLLNEENPHQLQQLIRLP--GQQYDE 276 G W EY+ G L+ NP R GQ E Sbjct: 880 KLGRITEKSIAGDEQAWERYEYNVQGQLIGAVNPAVTVTR-RYNQDGQLAQE 930 Score = 48.6 bits (114), Expect = 5e-04, Method: Composition-based stats. Identities = 38/223 (17%), Positives = 64/223 (28%), Gaps = 31/223 (13%) Query: 61 YAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRT 120 E Y +D G +A + P Y D + + Sbjct: 484 NGERRFLVGYRHDGEGNLIA------------TLDADNHPYQFEYIADSQMVRHTDRNGL 531 Query: 121 RIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRL 180 YQ S L RVE A G+ R D + Q S+ +L L Sbjct: 532 SFYYRYQRHS-DGLDRVEHAWGDGGLFDYRFHYDRVYQETQITD-SLGHTTLLRYDERGL 589 Query: 181 ESEILADRVSEESRRWLASC-------------GLTVEQMQNQMDPVYTPARKI-HLYHC 226 + S ++ A C G +Q N + + + Y Sbjct: 590 PFARVTPLGGVYSYQYDAQCRTIAEIDPAGNTHGWVYDQYANLTEETFADRSSVKTEYGD 649 Query: 227 DHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRL 269 DH+ P+ + G W +D G ++++ P ++ Sbjct: 650 DHK--PVRITDPGGRF-WRQSWDAQGKVISQTTPGKIATHFTY 689 Score = 48.3 bits (113), Expect = 7e-04, Method: Composition-based stats. Identities = 45/264 (17%), Positives = 70/264 (26%), Gaps = 36/264 (13%) Query: 15 YRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYLYDP 74 YR+D G L D D +++ Y + ++V +T + D Sbjct: 493 YRHDGEGNLIATLDA---------DNHPYQFEYIADSQMVRHTDRNGLSFYYRYQRHSDG 543 Query: 75 LGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQPGSFTPL 134 L R + W R Q T I + + P Sbjct: 544 LDRV--EHAWGDGGLFDYRFHYDRVYQET----------QITDSLGHTTLLRYDERGLPF 591 Query: 135 IRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSEESR 194 RV T G + Q + T+ + D V Q + E + Sbjct: 592 ARV-TPLGGVYSYQYDAQCRTIAE---IDPAGNTHGWVYDQYANLTEETFADRSSVKTEY 647 Query: 195 -------RWLASCGLTVEQMQNQMDPVY---TPARKIHLYHCDHRGLPLALVSTEGATEW 244 R G Q + V TP + + D G +A+V Sbjct: 648 GDDHKPVRITDPGGRFWRQSWDAQGKVISQTTPGKIATHFTYDDLGQLVAVVDASQQRTE 707 Query: 245 CAEYDEWGNLLNEENPHQLQQLIR 268 A YD WG L + + Sbjct: 708 LA-YDAWGFLRVITDARGNATSFK 730 Score = 46.3 bits (108), Expect = 0.003, Method: Composition-based stats. Identities = 38/268 (14%), Positives = 77/268 (28%), Gaps = 38/268 (14%) Query: 14 LYRYDRHGRLTEKTDLIPEGVIRTDDER--------------THRYHYDSQHR------L 53 Y Y+ G+L + R + + T Y Y++ + L Sbjct: 898 RYEYNVQGQLIGAVNPAVTVTRRYNQDGQLAQEIQQQPQVSATVEYGYNAAGQQAEQRHL 957 Query: 54 VHYTRTQYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLT 113 + + + RY YD LG+ +++++ + + R + RLT Sbjct: 958 LQHADEDDIQVQQRIRYGYDVLGQCISQQIDDHRPMAFSYDKIGRLTEQ--------RLT 1009 Query: 114 TIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVL 173 + Q + R + + Q+ G VL Sbjct: 1010 PSLSHHLSYSAAGQLAGYQ--TRRKGMVWSETDYFYDQHGNLTQREDSRQGSERYHYDVL 1067 Query: 174 VQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPL 233 Q++ D + R +CG + + + +T Y D G + Sbjct: 1068 GQIVG------YQDPLGTLHRYRYDACGDRFSTVADNAEGRHTQHDNGTAYQLDKAGQLV 1121 Query: 234 ALVSTEGATEWCAEYDEWGNLLNEENPH 261 + ++ +G L +N H Sbjct: 1122 SRTDRFSQLA--LRWNTFGRLAGIKNEH 1147 >UniRef50_B7GX39 Protein rhsD n=4 Tax=Acinetobacter baumannii RepID=B7GX39_ACIB3 Length = 1590 Score = 210 bits (534), Expect = 9e-53, Method: Composition-based stats. Identities = 86/333 (25%), Positives = 131/333 (39%), Gaps = 80/333 (24%) Query: 4 DNRIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAE 63 +N I Y+YD G +TE + + +D+Q+RL+ Sbjct: 1136 NNLIKSYKGKHYQYDVQGNVTEIIQA----------GKNLKLTWDNQNRLIRSD-----N 1180 Query: 64 PLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQ----NDR 119 + + Y YD GRR+ K+ + ++T +GWDGD + Sbjct: 1181 NGLVTEYGYDVFGRRLYKKTAK---------------ELTLFGWDGDLMIWESFKSAQTN 1225 Query: 120 TRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDR 179 IY+P SF PL+ Q+G +D ++ P + + Sbjct: 1226 YTKHYIYEPDSFVPLL----------------------QAGYKDFIQLIETPDYQEYQTK 1263 Query: 180 LESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTE 239 S + T + YHCD G P + + Sbjct: 1264 PYSIYKD------------------PVWNRNLGKERTALEQFTFYHCDQVGTPQTMTNIR 1305 Query: 240 GATEWCAEYDEWGNL-----LNEENPHQLQQLIRLPGQQYDEESGLYYNRHRYYDPLQGR 294 G W D WG + LN++NP + Q +R GQ YD E+ L+YNR+RYY+P R Sbjct: 1306 GECVWEILQDTWGAVSQIKALNQDNPFE-QNNLRFQGQYYDRETELHYNRYRYYEPHSAR 1364 Query: 295 YITQDPIGLKGGWNFYQYPLNPVQYIDSMGLAS 327 Y+++DPIGL+GG N Y +P Q+ID GL S Sbjct: 1365 YVSKDPIGLEGGMNTSSYVSDPNQWIDPKGLNS 1397 Score = 51.7 bits (122), Expect = 5e-05, Method: Composition-based stats. Identities = 45/230 (19%), Positives = 84/230 (36%), Gaps = 16/230 (6%) Query: 45 YHYDSQHRLVHYTRTQYAEPLVESRYLYDPLGRR---VAKRVWRRERDLTGWMSLSRKPQ 101 + ++ Q +++ AEPL +RY YD G + + R + + L+R Sbjct: 496 FAFNEQVKIIAVFLDDKAEPL--ARYEYDTQGNLIKAIDQNGHTRTYEYNQFHQLTRYTD 553 Query: 102 VTWYGWDGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGG 161 T G + R + + I+ GSF ++ ++A + Sbjct: 554 RTGRGQN-IRYESTEAKAKAIEEWADDGSFHTKLKWHPRLRQVAVYDAYDVPTYY--YFD 610 Query: 162 EDGGSVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQM--QNQMDPVYTPAR 219 DG + ++ D ES D +R+ T ++ Q+Q+ + P Sbjct: 611 LDGFTYR-----TRLADGRESWYSRDGKKRITRQIDFDGRETQQEYNDQDQLVKIVQPNG 665 Query: 220 KIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRL 269 I + + +G + + EG+ W EYDE N+ E NP + Sbjct: 666 GIIRFAYNKQGNLVEIKDPEGSI-WKREYDENRNVSKEINPLGHITQYKY 714 Score = 49.4 bits (116), Expect = 3e-04, Method: Composition-based stats. Identities = 45/275 (16%), Positives = 85/275 (30%), Gaps = 46/275 (16%) Query: 13 YLYRYDRHGRLTEKTDLIPEGVIRTDD------------ERTHRYHYDSQHRLVHYTRTQ 60 + Y++ G L E D R D +Y Y++ ++LV + Sbjct: 668 IRFAYNKQGNLVEIKDPEGSIWKREYDENRNVSKEINPLGHITQYKYNNDNQLVEVIDAK 727 Query: 61 YAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRT 120 ++ Y+ LG+ ++ + S K Y DG + Sbjct: 728 GGVKKIQ----YNELGQMIS------------YTDCSGKSSTWEYDEDGALTAEQTANNK 771 Query: 121 RIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRL 180 +Q Y T + + Q D L++ D + L Sbjct: 772 VVQYFYS-----------TKGRDKGQLQSIIYPDGLKEYFEHDEEGRLLKHT---DTKGL 817 Query: 181 ESEILADRVSEESRRWLASCGLTVEQMQNQ--MDPVYTPARKIHLYHCDHRGLPLALVST 238 +E ++V +R A+ Q Q + + + +L+ + G + + Sbjct: 818 VTEYKYNQVGLLEQRIDANRHSVAYQWDKQGRIQKLINQNQAEYLFGYNPYGYLIREQAF 877 Query: 239 EGATEWCAEYDEWGNLLNEENPHQLQQLIRLP-GQ 272 +G + Y+E G L P+ L Q GQ Sbjct: 878 DGEEK-HYSYNENGRLFQIRRPNILTQFDYYADGQ 911 Score = 47.1 bits (110), Expect = 0.001, Method: Composition-based stats. Identities = 37/262 (14%), Positives = 76/262 (29%), Gaps = 34/262 (12%) Query: 14 LYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYLYD 73 + YD G LT +T + + +Y Y ++ R ++ ++ + +D Sbjct: 753 TWEYDEDGALT---------AEQTANNKVVQYFYSTKGRDKGQLQSIIYPDGLKEYFEHD 803 Query: 74 PLGRRVAKRVWRRERDLTGWMSLSRKPQV-------TWYGWDGDRLTTIQNDRTRIQTIY 126 GR + + + + Q Y WD ++ + + ++ Sbjct: 804 EEGRLLKHTDTKGLVTEYKYNQVGLLEQRIDANRHSVAYQWDKQGRIQKLINQNQAEYLF 863 Query: 127 QPGSFTPLIRVETATGELAKTQRR--------SLADTLQQSGGEDGGSVVFPPVLVQMLD 178 + LIR + GE + L Q G + Sbjct: 864 GYNPYGYLIREQAFDGEEKHYSYNENGRLFQIRRPNILTQFDYYADGQIASKSFTHLHTG 923 Query: 179 RLESE----------ILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDH 228 + ++E A + + + G V + Q+ P P + Y D Sbjct: 924 QKQTEQFDYNLNSQLSRASNEVSQIDLYRNALGQLVREHQHYKIPELKPLTAVLHYEYDE 983 Query: 229 RGLPLALVSTEGATEWCAEYDE 250 G + + +G T Y Sbjct: 984 LGNLIKTIRPDGHTLNHLVYGS 1005 >UniRef50_A1TSU8 YD repeat protein n=4 Tax=Acidovorax RepID=A1TSU8_ACIAC Length = 1586 Score = 210 bits (533), Expect = 1e-52, Method: Composition-based stats. Identities = 92/391 (23%), Positives = 129/391 (32%), Gaps = 124/391 (31%) Query: 3 PDNRIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYA 62 P NR+A + YD HG E+ R Y Y +H++V +Y Sbjct: 1177 PHNRLAVYQDLRFTYDLHGNTIER---------RIGWHTVQHYRYSPEHQIVEARVVRYR 1227 Query: 63 EPLVE-------------SRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDG 109 E E + Y YD LGRR+ KR T + +DG Sbjct: 1228 ERPAEGHAEPAPATTEQVTHYRYDALGRRIDKR---------------DAFGRTAFLYDG 1272 Query: 110 DRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVF 169 D L + ++ Sbjct: 1273 DLLAGELRGSKLSEY-------------------------------------------LY 1289 Query: 170 PPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHR 229 P L +LESE W ++ + P A + Y CD Sbjct: 1290 EPDSFVPLAKLESE------------WKGEAAKERDEDKESARPKDFAA---YYYQCDQI 1334 Query: 230 GLPLALVSTEGATEWCAEYDEWGNLLN----------------------------EENPH 261 G P L +G W A Y WG + + Sbjct: 1335 GAPQELTDEQGRIVWAASYQVWGQTRALQVMRTGTDDAAVFTQAERPLALAAKGDVQALN 1394 Query: 262 QLQQLIRLPGQQYDEESGLYYNRHRYYDPLQGRYITQDPIGLKGGWNFYQYPLNPVQYID 321 ++Q +R GQ +D E+GL+YNR RYYDP+ GR++ QDPIGL GG N + Y NP+ + D Sbjct: 1395 FVEQPLRFQGQYFDGETGLHYNRFRYYDPVTGRFVHQDPIGLAGGNNLFFYAPNPLIWND 1454 Query: 322 SMGLASKYGHLNNGGYG-ARPNKPPTPDPSK 351 +GL K G A+ P+P PS Sbjct: 1455 PLGLKPKRCGCRPDPCGIAKHGHQPSPRPSD 1485 Score = 66.7 bits (161), Expect = 2e-09, Method: Composition-based stats. Identities = 47/256 (18%), Positives = 84/256 (32%), Gaps = 15/256 (5%) Query: 12 HYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYL 71 ++R D GRL K L P+G+ + YD R++H + Sbjct: 901 RTVFRRDAVGRLVAKAHLGPDGMEEGAGSGLTTFAYDLLGRMLHA-----GNGDARVHFT 955 Query: 72 YDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQPGSF 131 YDPL R + + G +L R Y G+R + +Q +Y Sbjct: 956 YDPLSRLTEEVQEHLAPEGAG--TLGRYAWHHAYDALGNRTDSRMPGGRHVQWLYYGSGH 1013 Query: 132 TPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSE 191 IRV+ L+ +R +L ++++ G + P+ + ++ + Sbjct: 1014 LHQIRVDGHV--LSDIERDALHQEIERTQGALESRYGWDPMGRLVAHKV---GRRQALQG 1068 Query: 192 ESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVST-EGATEWCAEYDE 250 + +Q + + + R Y D G +A G YD Sbjct: 1069 QPGMPSPQALRDRDQGLPALPQLPSGDRIARQYRYDPTGHLIATRDGLRGE--SHYRYDP 1126 Query: 251 WGNLLNEENPHQLQQL 266 G +L + QQ Sbjct: 1127 LGRILAAQRGEGKQQP 1142 Score = 63.7 bits (153), Expect = 2e-08, Method: Composition-based stats. Identities = 49/283 (17%), Positives = 68/283 (24%), Gaps = 59/283 (20%) Query: 6 RIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDE------------RTHRYHYDSQHRL 53 R A +R+D G L TD R HYD + L Sbjct: 626 RDALGRTTRWRFDARGNLLAVTDAAGATTRLAYGHLDLPVEITDALGHVWRQHYDERGNL 685 Query: 54 VHYTRTQYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSR-------KPQVTWYG 106 +R+ YD G VA + W + Q T Y Sbjct: 686 AERVDPLGH----ATRWRYDARGLPVAIEDAHGKTRRLLWDDAGQLVAYTDCSGQTTRYT 741 Query: 107 WDGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGS 166 WD D T Y+ + L V G + L G + Sbjct: 742 WDTLGNLLTSTDALGQTTRYRHDALGRLRHVVGPDGSEHRYD-FDAQGNLTAYTDPQGAA 800 Query: 167 VVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHC 226 + ++Q + D + R Y Sbjct: 801 TRYAYNG------------------------------LDQPVLRQDALGGTLR----YQH 826 Query: 227 DHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRL 269 D G +AL + G YD NL+ E Q R Sbjct: 827 DAVGRIVALQNENGDIT-RFTYDAADNLIEEIGFDGRIQRYRY 868 Score = 61.0 bits (146), Expect = 9e-08, Method: Composition-based stats. Identities = 50/277 (18%), Positives = 81/277 (29%), Gaps = 47/277 (16%) Query: 11 AHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRY 70 Y +D G L TD + +T RY +D+ RL H + E RY Sbjct: 736 QTTRYTWDTLGNLLTSTDAL---------GQTTRYRHDALGRLRHVVGPDGS----EHRY 782 Query: 71 LYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQPGS 130 +D G A + T Y ++G ++ D YQ + Sbjct: 783 DFDAQGNLTA--------------YTDPQGAATRYAYNGLDQPVLRQDALGGTLRYQHDA 828 Query: 131 FTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRL---------- 180 ++ ++ G++ + AD L + G DG + L L Sbjct: 829 VGRIVALQNENGDITRF-TYDAADNLIEEIGFDGRIQRYRYNAAGELAELHERDARLPPD 887 Query: 181 --ESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARK-IHLYHCDHRGLPLALVS 237 A + + + + G V + D + A + + D G L + Sbjct: 888 TPYDPDPAAPLPKRTVFRRDAVGRLVAKAHLGPDGMEEGAGSGLTTFAYDLLG--RMLHA 945 Query: 238 TEGATEWCAEYDEWGNLLNEE----NPHQLQQLIRLP 270 G YD L E P L R Sbjct: 946 GNGDARVHFTYDPLSRLTEEVQEHLAPEGAGTLGRYA 982 Score = 57.5 bits (137), Expect = 1e-06, Method: Composition-based stats. Identities = 42/269 (15%), Positives = 74/269 (27%), Gaps = 35/269 (13%) Query: 12 HYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYL 71 + YD R T TD + R Y Y++ H +V T V + Sbjct: 565 DTRFEYDLGRRTTHVTDAL---------GRRSSYEYNAAHEVVAITEPGPDGRPVRTETR 615 Query: 72 YDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQPGSF 131 D G + + G+ L + Y G Sbjct: 616 LDAAGN------------PEEARDALGRTTRWRFDARGNLLAVTDAAGATTRLAY--GHL 661 Query: 132 TPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFP------PVLVQMLDRLESEIL 185 + + A G + + Q L + G + + PV ++ +L Sbjct: 662 DLPVEITDALGHVWR-QHYDERGNLAERVDPLGHATRWRYDARGLPVAIEDAHGKTRRLL 720 Query: 186 ADRVSEESRRWLASCGLTVEQMQNQMDPVYTPA---RKIHLYHCDHRGLPLALVSTEGAT 242 D + + G T + + + T + Y D G +V +G+ Sbjct: 721 WDDAGQLVA-YTDCSGQTTRYTWDTLGNLLTSTDALGQTTRYRHDALGRLRHVVGPDGSE 779 Query: 243 EWCAEYDEWGNLLNEENPHQLQQLIRLPG 271 ++D GNL +P G Sbjct: 780 H-RYDFDAQGNLTAYTDPQGAATRYAYNG 807 Score = 51.7 bits (122), Expect = 5e-05, Method: Composition-based stats. Identities = 68/346 (19%), Positives = 102/346 (29%), Gaps = 60/346 (17%) Query: 14 LYRYDRHGRLTEKTDLIPEGVIRTDD-ERTHRYHYDSQHRLVHYTRTQYAEPLVESRYLY 72 Y Y G E DL D T RY Y H +V Y + + Sbjct: 492 RYAYGTEGN--EAGDLRANLAEAADALGGTARYRY-RHHLMVAYATRNGFTHHQQWS-RH 547 Query: 73 DPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWD--GDRLTTIQNDRTRIQTIYQPGS 130 D GR V R W + L + T + D G R + N + I +PG Sbjct: 548 DAGGRVV--RTWTDTQGLLDTRFEYDLGRRTTHVTDALGRRSSYEYNAAHEVVAITEPGP 605 Query: 131 FTPLIRVETATGELA-KTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILAD-- 187 +R ET + R + + G+++ RL L Sbjct: 606 DGRPVRTETRLDAAGNPEEARDALGRTTRWRFDARGNLLAVTDAAGATTRLAYGHLDLPV 665 Query: 188 RVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEG---ATEW 244 +++ + ++DP+ R + D RGLP+A+ G W Sbjct: 666 EITDALGHVWRQHYDERGNLAERVDPLGHATRWRY----DARGLPVAIEDAHGKTRRLLW 721 Query: 245 -----------------CAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEESGLYYNRHRY 287 +D GNLL + GQ RY Sbjct: 722 DDAGQLVAYTDCSGQTTRYTWDTLGNLLTSTDAL---------GQ-----------TTRY 761 Query: 288 YDPLQGRYITQDPIGLKGGWNFYQYP--LNPVQYIDSMGLASKYGH 331 GR +G G + Y + N Y D G A++Y + Sbjct: 762 RHDALGRLRHV--VGPDGSEHRYDFDAQGNLTAYTDPQGAATRYAY 805 >UniRef50_Q13ML3 YD repeat protein n=10 Tax=Proteobacteria RepID=Q13ML3_BURXL Length = 1531 Score = 209 bits (531), Expect = 2e-52, Method: Composition-based stats. Identities = 93/376 (24%), Positives = 133/376 (35%), Gaps = 49/376 (13%) Query: 17 YDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYLYDPLG 76 YD +GRL + + D YHYD+ RLV + ++ Y YD G Sbjct: 1070 YDVNGRLARRQSYRGMNGVVPDRVIDRGYHYDALDRLVSKRHSL----QQQTVYRYDDSG 1125 Query: 77 R------------------------RVAKRVWRRERDLTGWMSLSRKPQV-----TWYGW 107 R R RV + ++ R +V Y + Sbjct: 1126 RISGCHNEAYWDTLQYDAAANLVEVRERARVKGEPAPVEREGNVVRFNRVLRFRDRRYEY 1185 Query: 108 DGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGE----D 163 D T Y+ + L+ V + D + + + Sbjct: 1186 DA-HGRTASRLTAAGLQRYRYDAEHRLVEVSIEQTGGPVRRYGYAYDAVGRRVAKFAMDG 1244 Query: 164 GGSVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHL 223 G + R+ E+ AD G + ++D I+ Sbjct: 1245 DGQPFGRTRFLWDGMRMVQEVRADGADSL----YLYNGEGSYEPVARIDGRNGLGHSIYY 1300 Query: 224 YHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQ--QLIRLPGQQYDEESGLY 281 YH D G P L S +G W A Y WGN + E P Q +R GQ D E+GL+ Sbjct: 1301 YHTDINGAPEELTSADGRIVWQAMYQLWGNTVRESEPESYAVRQNLRYQGQYLDRETGLH 1360 Query: 282 YNRHRYYDPLQGRYITQDPIGLKGGWNFYQYPLNPVQYIDSMGLASKYGHLN-----NGG 336 YN RYYDP GR+ T DPIGL GG N Y+Y NP+ +ID MGL+ + + G Sbjct: 1361 YNTLRYYDPDIGRFTTPDPIGLAGGVNLYRYAPNPMSWIDPMGLSCTSNLKDIENQLSRG 1420 Query: 337 YGARPNKPPTPDPSKL 352 GA + +L Sbjct: 1421 KGATVTVSSKAEAEEL 1436 Score = 66.0 bits (159), Expect = 3e-09, Method: Composition-based stats. Identities = 51/297 (17%), Positives = 88/297 (29%), Gaps = 36/297 (12%) Query: 8 ARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERT------------HRYHYDSQHRLVH 55 AR R++ G+L+ TD D R RY D+ RLV Sbjct: 758 ARGGERHLRWNEDGQLSSHTDCSGSVTAFYYDARGALECVTNAEGDCTRYRRDALGRLVT 817 Query: 56 YTRTQYAEPLVESRYLYDPLGRRVAK-------RVWRRERDLTGWMSLSRKPQVTWYGWD 108 E R+ D GR + ++R+R + + +D Sbjct: 818 MVHPDG----REERFTVDAAGRLLTHTDASGRTTRYQRDRRGLVQARIDGAGHRVGFEYD 873 Query: 109 G-DRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSV 167 RL + N+ + + + L R G +T +L G + Sbjct: 874 SYGRLLALVNENGE-RYGFAYDAKNRLTRQTDLDGRRQETDYDALDQVAAVRYAAGGDAQ 932 Query: 168 VFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCD 227 + L RL D ++ + G + + + D ++ + D Sbjct: 933 IEHTFGRDALGRLIGRYTPDAITFHD---YDASGNLLTISRKRHDAPRKRDVEVIAFRYD 989 Query: 228 HRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRL--PGQQY----DEES 278 G L +++G EYD GN + P G + D E+ Sbjct: 990 RLGRLLEEATSQGKL--RHEYDVLGNRIATTLPDGRTINHLYYGSGHLHQINVDGET 1044 Score = 66.0 bits (159), Expect = 3e-09, Method: Composition-based stats. Identities = 55/297 (18%), Positives = 88/297 (29%), Gaps = 36/297 (12%) Query: 5 NRIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEP 64 R DA + YD G L + + R D + YD RL+ +Q Sbjct: 947 GRYTPDAITFHDYDASGNLLTISRKRHDAP-RKRDVEVIAFRYDRLGRLLEEATSQG--- 1002 Query: 65 LVESRYLYDPLGRRVAK-----RVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTI---Q 116 + R+ YD LG R+A R +G + T + DRL Sbjct: 1003 --KLRHEYDVLGNRIATTLPDGRTINHLYYGSGHLHQINVDGETVSDFQRDRLHREVLRS 1060 Query: 117 NDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTL-----------------QQS 159 + +++Y L R ++ G R + Q Sbjct: 1061 QGKLDTRSLYDVN--GRLARRQSYRGMNGVVPDRVIDRGYHYDALDRLVSKRHSLQQQTV 1118 Query: 160 GGEDGGSVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPAR 219 D + D L+ + A+ V R + VE+ N + Sbjct: 1119 YRYDDSGRISGCHNEAYWDTLQYDAAANLVEVRERARVKGEPAPVEREGNVVRFNRVLRF 1178 Query: 220 KIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQYDE 276 + Y D G + ++ G YD + L E + Q +R G YD Sbjct: 1179 RDRRYEYDAHGRTASRLTAAG--LQRYRYDA-EHRLVEVSIEQTGGPVRRYGYAYDA 1232 Score = 56.0 bits (133), Expect = 3e-06, Method: Composition-based stats. Identities = 59/296 (19%), Positives = 93/296 (31%), Gaps = 45/296 (15%) Query: 9 RDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVES 68 Y + YD RLT +TDL D R YD+ ++ + +E Sbjct: 885 NGERYGFAYDAKNRLTRQTDL---------DGRRQETDYDALDQVAAVRYAAGGDAQIEH 935 Query: 69 RYLYDPLGRRVAKRVWRR----ERDLTGWMSL----------SRKPQVTWYGWDGD-RLT 113 + D LGR + + + D +G + R +V + +D RL Sbjct: 936 TFGRDALGRLIGRYTPDAITFHDYDASGNLLTISRKRHDAPRKRDVEVIAFRYDRLGRLL 995 Query: 114 TIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVL 173 + +++ Y V R++ SG +V V Sbjct: 996 EEATSQGKLRHEYD---------VLGNRIATTLPDGRTINHLYYGSGHLHQINVDGETVS 1046 Query: 174 VQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKI-HLYHCDHRGLP 232 DRL E+L + ++R G + + P R I YH D Sbjct: 1047 DFQRDRLHREVLRSQGKLDTRSLYDVNGRLARRQSYRGMNGVVPDRVIDRGYHYDAL--- 1103 Query: 233 LALVSTEGATEWC--AEYDEWGNLLNEENPHQLQQLIRLPGQQYDEESGLYYNRHR 286 LVS + + YD+ G + N L QYD + L R R Sbjct: 1104 DRLVSKRHSLQQQTVYRYDDSGRISGCHNEAYWDTL------QYDAAANLVEVRER 1153 Score = 42.5 bits (98), Expect = 0.033, Method: Composition-based stats. Identities = 58/340 (17%), Positives = 86/340 (25%), Gaps = 77/340 (22%) Query: 3 PDN----RIARDAHY-----LYRYDRHGRLTEKTDLIPEGVIRT-DDERTHRYHYDSQHR 52 P N R+ + + Y+ GRL D +R +E H Y R Sbjct: 472 PHNAERQRLLQLSDRNRNALRLHYNDAGRLEAIADSTGHQCVRLHYEEPVHPYR---VSR 528 Query: 53 LVHYTRTQYAEPLVESRYLYDPLG------RRVAKRVWRRERDLTGWMSLSRKPQ--VTW 104 L + V RY YD G R + + D M + R P Sbjct: 529 LERLYGEDLQQRDVLVRYRYDADGNLAEVRNRDDTILRQFAYDAGHRMVMHRLPAGMECH 588 Query: 105 YGW------DGDRLTTIQN-DRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLAD--- 154 YGW DG+ +++ T +RV + G Q L Sbjct: 589 YGWGRFDGPDGEEWRVVEHWTDTGEHYWLDYQIEARTLRVRDSLGRSTFRQWDELYQITC 648 Query: 155 ---------TLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSE----ESRRWLASCG 201 + S +V V D E+ ++ E +W Sbjct: 649 FEDELGHVSRFEWSRERQLLAVTDAKGGVWRWDYDEAGRVSAVTDPLGRVEQTQWHPVWA 708 Query: 202 LTVEQMQNQMDP-------------VYTPARKIHLYHCDHRGLPLALVSTEG---ATEWC 245 L + + P + LYH D G + + G W Sbjct: 709 LPTLEADTGGNTWRHFYDERGNRIVTIDPLMQRTLYHRDAHGQVMMITDARGGERHLRWN 768 Query: 246 AE-----------------YDEWGNLLNEENPHQLQQLIR 268 + YD G L N R Sbjct: 769 EDGQLSSHTDCSGSVTAFYYDARGALECVTNAEGDCTRYR 808 >UniRef50_D0KES6 YD repeat protein n=15 Tax=Gammaproteobacteria RepID=D0KES6_PECWW Length = 1379 Score = 208 bits (528), Expect = 4e-52, Method: Composition-based stats. Identities = 90/396 (22%), Positives = 138/396 (34%), Gaps = 46/396 (11%) Query: 4 DNRIARDAHYLYR---YDRHGRLTEKTDLIPE---------------------GVIRTDD 39 I+R + YD GRLT + + + +R Sbjct: 928 HREISRTQGRRTQQRAYDSLGRLTSQRSGLWDVAEPEQQLLSRALRYTASGELASVRDSL 987 Query: 40 ERTHRYHYDSQHRLVHYTRTQYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRK 99 +Y YD++ RL R + Y YD R L+ L+ + Sbjct: 988 RGDVQYDYDAEGRL--LKRIDVHWQVHHRAYGYDAADNLQDSAYSPSARPLSDNRLLNWR 1045 Query: 100 PQVTWYGWDGDRLTTIQNDRTRIQTIYQPGSFTPL--IRVETATGELAKTQRRS-LADTL 156 Y G+ I+ + YQ + L R GE L Sbjct: 1046 HLWNQYDGQGN---LIRRREGTTEQFYQYDADNRLVEARGRGPQGEFVARYGYDALGRRT 1102 Query: 157 QQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYT 216 +++ + RL L R ++ + +L + + Sbjct: 1103 RKTVTWGDSGKQEETRFLWEGFRL----LQARQADRTETYLYDPTIWWSPLARITQQPGA 1158 Query: 217 PARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQL--------QQLIR 268 P I ++ + G PL + EGA W +Y +G + + + Q +R Sbjct: 1159 PDGDIRWFNTELNGAPLEMTDAEGAVRWSGDYGSFGAINGQTQDSEGLRHGKPVESQSLR 1218 Query: 269 LPGQQYDEESGLYYNRHRYYDPLQGRYITQDPIGLKGGWNFYQYPLNPVQYIDSMGLAS- 327 GQ DEE+GL+YN RYYDP GR+ TQDPIGL GG N Y Y NP+ ++D +GLA Sbjct: 1219 YAGQYADEETGLHYNLFRYYDPTVGRFTTQDPIGLAGGLNLYAYAPNPLGWVDPLGLAKI 1278 Query: 328 -KYGHLNNGGYGARPNKPPTPDPSKLPDIAKQLRLP 362 G + G G N P P ++ + P Sbjct: 1279 LTDGVVYRMGSGTDSNLTPRPGKDTTTGLSTTIEKP 1314 Score = 53.3 bits (126), Expect = 2e-05, Method: Composition-based stats. Identities = 50/308 (16%), Positives = 80/308 (25%), Gaps = 32/308 (10%) Query: 14 LYRYDRHGRLTEKTDLIPEGVIRT------------DDERTHRYHYDSQHRLVHYTRTQY 61 + YD G+L D R D R ++++ +L + Q Sbjct: 655 TFEYDHDGQLLASVDAEGHTTRREWDACGHLTSVIYPDGRRETLRWNARGQLQAWRDAQN 714 Query: 62 AEPLVESRYLYDPLG---------RRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRL 112 + E R+ Y+ LG RR + + L + + Y G RL Sbjct: 715 S----EVRWHYNVLGQPVSVTDRLRRTTRWHYDARGLLLRLENGNGAAYQFGYDAVG-RL 769 Query: 113 TTIQN-DRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPP 171 Q D + Y D Q + VF Sbjct: 770 VNEQRVDGVELTFHYDAAGHLCQRSQRGHAANDEAISHIYQHDAAGQLVRREHAHAVFHY 829 Query: 172 VLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGL 231 L + LT + + + Y D G Sbjct: 830 QHNNRGQLLSLKREPTGEGLALGLTADEVRLTYDAAGDLSGEHGSEGDIG--YTRDALGN 887 Query: 232 PLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLI-RLPGQQYDEESGLYYNRHRYYDP 290 AL +G T Y G++ + HQ+ R + + + R YD Sbjct: 888 VSALSLPDGDTLRWLRYGS-GHVSAVKFNHQVVSEFTRDRLHREISRTQGRRTQQRAYD- 945 Query: 291 LQGRYITQ 298 GR +Q Sbjct: 946 SLGRLTSQ 953 Score = 52.1 bits (123), Expect = 4e-05, Method: Composition-based stats. Identities = 54/278 (19%), Positives = 84/278 (30%), Gaps = 68/278 (24%) Query: 17 YDRHGRLTEKTDLIPE-------------GVIRTDDERTHRYHYDSQHRLVHYTRTQYAE 63 +D +GRL +TD + ++ D + YD +RLV + Sbjct: 550 WDDYGRLLSETDPLGRETCYQWYRLTGHITLVTYPDGSREQMQYDDLNRLVEEIDARGNS 609 Query: 64 PLVESRYLY------------DPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDR 111 +RY Y D LG V VW R+ LT S + Y DG Sbjct: 610 ----TRYQYPTAQESLPDSITDALGGTVT-LVWNRQGLLTARTDCSGQCSTFEYDHDGQL 664 Query: 112 LTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPP 171 L ++ + + + + L V G +T R + LQ Sbjct: 665 LASVDAEGHTTRR--EWDACGHLTSVIYPDGRR-ETLRWNARGQLQAWRDAQ------NS 715 Query: 172 VLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGL 231 + + L + + RW H D RGL Sbjct: 716 EVRWHYNVLGQPVSVTDRLRRTTRW----------------------------HYDARGL 747 Query: 232 PLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRL 269 L L + GA + YD G L+NE+ ++ Sbjct: 748 LLRLENGNGA-AYQFGYDAVGRLVNEQRVDGVELTFHY 784 Score = 50.2 bits (118), Expect = 2e-04, Method: Composition-based stats. Identities = 39/259 (15%), Positives = 69/259 (26%), Gaps = 39/259 (15%) Query: 6 RIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPL 65 R+ R + YD G L + + +++ YD+ RLV+ R Sbjct: 733 RLRRT--TRWHYDARGLLLR---------LENGNGAAYQFGYDAVGRLVNEQRVDG---- 777 Query: 66 VESRYLYDPLG---RRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRI 122 VE + YD G +R + + ++ Q L ++ Sbjct: 778 VELTFHYDAAGHLCQRSQRGHAANDEAISHIYQHDAAGQ----------LVRREHAHAVF 827 Query: 123 QTIYQP-GSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLE 181 + G L R T G + T +G G + Sbjct: 828 HYQHNNRGQLLSLKREPTGEGLALGLTADEVRLTYDAAGDLSGEHGSEGDIGYTRDALGN 887 Query: 182 SEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGA 241 L+ + R G N ++H + T+G Sbjct: 888 VSALSLPDGDTLRWLRYGSGHVSAVKFNHQVVSEFTRDRLH----------REISRTQGR 937 Query: 242 TEWCAEYDEWGNLLNEENP 260 YD G L ++ + Sbjct: 938 RTQQRAYDSLGRLTSQRSG 956 Score = 44.8 bits (104), Expect = 0.006, Method: Composition-based stats. Identities = 45/262 (17%), Positives = 74/262 (28%), Gaps = 28/262 (10%) Query: 18 DRHGRLTEKTDLIPEG-VIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYLYDPLG 76 D GR T + E + + + +D RL+ T DPLG Sbjct: 520 DYDGRETTLSYADGELCDVIMPGGASRKTTWDDYGRLLSET---------------DPLG 564 Query: 77 RRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQPGSFTPLIR 136 R + +R +T + Y D +RL + R P + L Sbjct: 565 RETCYQWYRLTGHITLVTYPDGSREQMQYD-DLNRLVEEIDARGNSTRYQYPTAQESLPD 623 Query: 137 VETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVL-VQMLDRLESEILADRVSEES-- 193 T T + L G F Q+L +++E R ++ Sbjct: 624 SITDALGGTVTLVWNRQGLLTARTDCSGQCSTFEYDHDGQLLASVDAEGHTTRREWDACG 683 Query: 194 --RRWLASCGLTVEQMQNQMDPV----YTPARKIHLYHCDHRGLPLALVSTEGATEWCAE 247 + G N + ++ H + G P+++ T Sbjct: 684 HLTSVIYPDGRRETLRWNARGQLQAWRDAQNSEVRW-HYNVLGQPVSVTDRLRRTT-RWH 741 Query: 248 YDEWGNLLNEENPHQLQQLIRL 269 YD G LL EN + Sbjct: 742 YDARGLLLRLENGNGAAYQFGY 763 >UniRef50_B2VH58 Rhs family protein n=5 Tax=Enterobacteriaceae RepID=B2VH58_ERWT9 Length = 1322 Score = 207 bits (527), Expect = 6e-52, Method: Composition-based stats. Identities = 89/342 (26%), Positives = 126/342 (36%), Gaps = 68/342 (19%) Query: 9 RDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYT-----RTQYAE 63 + Y+YD GR+T+ + R+ +D H L+ R Sbjct: 932 NSGVHRYQYDVLGRITQAGE--------------ERFAFDPAHNLLSAATDAPLRDNRMR 977 Query: 64 PLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQ 123 + R+ YD G KR+ R R + W+ + + Sbjct: 978 VYEDKRWEYDAHGNVTEKRIGRHTRQ--------------RFIWNAEHQLEEAHG----- 1018 Query: 124 TIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESE 183 E E + T + G + V DRL SE Sbjct: 1019 --------------ERRGVEQSTTYGYDAFGRRSWKKDKFGVTH-----FVWDGDRLLSE 1059 Query: 184 ILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPAR-KIHLYHCDHRGLPLALVSTEGAT 242 I R S W+ V Q T + +IH YH D G+P L + G Sbjct: 1060 IRGAR----SHTWVYEDSGFVPLAQISATQGDTEEQAEIHWYHTDQAGMPRELSNRSGDI 1115 Query: 243 EWCAEYDEWGNLLN------EENPHQLQQLIRLPGQQYDEESGLYYNRHRYYDPLQGRYI 296 W A+Y WGN E + + Q +R GQ +D E+GL+YNR RYYDP GR+I Sbjct: 1116 CWQADYRVWGNTRQVSYAQQEADAETIHQPLRYQGQYFDGETGLHYNRFRYYDPDIGRFI 1175 Query: 297 TQDPIGLKGGWNFYQYPLNPVQYIDSMGLASKYGHLNNGGYG 338 ++DP+GL GG N YQY NP ++D +GL H G Sbjct: 1176 SRDPVGLSGGMNLYQYAPNPYGWVDPLGLMKCSPHKKTTYEG 1217 Score = 56.7 bits (135), Expect = 2e-06, Method: Composition-based stats. Identities = 50/300 (16%), Positives = 82/300 (27%), Gaps = 51/300 (17%) Query: 14 LYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVH-YTRTQYAEPLVESRYLY 72 Y YD LT + + G E Y D+ RL+ ++ +R+ Y Sbjct: 731 RYEYDAGDMLTARREYGDSGNG--SSEIRTHYQRDNAGRLLEKLVSRAGSKRWQRTRFRY 788 Query: 73 DPLGR---------RVAKRVWRRERDLTGWMSLSRKPQVTWYGWD--GDRLTTIQNDRTR 121 D +GR RV + L K +V + +D G+R + D Sbjct: 789 DTVGRLAAGINHGGRVELEYDAAGQLLLERSLTRGKERVLRHQYDELGNRTLSTLPDGRE 848 Query: 122 IQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLE 181 +++ Y GS I++ +++ R L ++S G V + R Sbjct: 849 LKSFY-YGS-GHRIQINLGKRVISEISRDVLHRETRRSQGGLISEYVRDETGRLITQRAS 906 Query: 182 SEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLA------L 235 E R V+ +H Y D G Sbjct: 907 QGGKLKVAREYGWRRNGELQQMVDL-----------NSGVHRYQYDVLGRITQAGEERFA 955 Query: 236 VSTEGATEW------------------CAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEE 277 EYD GN+ + +Q + EE Sbjct: 956 FDPAHNLLSAATDAPLRDNRMRVYEDKRWEYDAHGNVTEKRIGRHTRQRFIWNAEHQLEE 1015 Score = 55.2 bits (131), Expect = 6e-06, Method: Composition-based stats. Identities = 53/265 (20%), Positives = 83/265 (31%), Gaps = 38/265 (14%) Query: 9 RDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLV---HYTRTQYAEPL 65 A Y YD L + + D RY YD+ L Y + Sbjct: 705 NGAQYHMEYDERDNLV---------MEQGFDGCITRYEYDAGDMLTARREYGDSGNGSSE 755 Query: 66 VESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDG-DRLTTIQNDRTRIQT 124 + + Y D GR + K V R S++ Q T + +D RL N R++ Sbjct: 756 IRTHYQRDNAGRLLEKLVSRAG---------SKRWQRTRFRYDTVGRLAAGINHGGRVEL 806 Query: 125 IYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPP------VLVQMLD 178 Y L R T E + S DG + + + + Sbjct: 807 EYDAAGQLLLERSLTRGKERVLRHQYDELGNRTLSTLPDGRELKSFYYGSGHRIQINLGK 866 Query: 179 RLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARK-------IHLYHCDHRGL 231 R+ SEI D + E+RR + GL E ++++ + T Y G Sbjct: 867 RVISEISRDVLHRETRR--SQGGLISEYVRDETGRLITQRASQGGKLKVAREYGWRRNGE 924 Query: 232 PLALVSTEGATEWCAEYDEWGNLLN 256 +V +YD G + Sbjct: 925 LQQMVDLNSGVH-RYQYDVLGRITQ 948 Score = 44.0 bits (102), Expect = 0.013, Method: Composition-based stats. Identities = 48/273 (17%), Positives = 85/273 (31%), Gaps = 32/273 (11%) Query: 14 LYRYDRHGRLTEKTDLIPEGVIRTDDERTH-RYHYDSQHRLVHYTRTQYAEPLVES---- 68 + ++ G L TD D+ + D+ ++ + + +PL+ + Sbjct: 584 RFSWNSVGFLLAHTDCSGSQTKYAYDKYGWLKERTDAAGQMTRFHHGRDGQPLIVTQADG 643 Query: 69 ---RYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTI 125 + YD R +A + + DG L + R+ Sbjct: 644 TTESFEYDRWRRLIA------------FTDAEGRATRWQLAADGLPLMRTDALQQRVSYC 691 Query: 126 YQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEIL 185 Y L+ E + R D L G DG + ML Sbjct: 692 YDNARRLALLANENGAQYHMEYDER---DNLVMEQGFDGCITRYEYDAGDMLTARREYGD 748 Query: 186 ADRVSEESRRWL--ASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATE 243 + S E R + G +E++ ++ + D G A ++ G Sbjct: 749 SGNGSSEIRTHYQRDNAGRLLEKLVSRAGSKRWQRTRFRY---DTVGRLAAGINHGGRV- 804 Query: 244 WCAEYDEWGNLLNEENPHQLQQLIRLPGQQYDE 276 EYD G LL E + + ++ R+ QYDE Sbjct: 805 -ELEYDAAGQLLLERSLTRGKE--RVLRHQYDE 834 Score = 42.9 bits (99), Expect = 0.025, Method: Composition-based stats. Identities = 48/296 (16%), Positives = 83/296 (28%), Gaps = 58/296 (19%) Query: 5 NRIARDAHYLYRYDR---HGRLTEKTDLIPE--------GVIRTDD--ERTHRYHYDSQH 51 +R++ + Y YDR G++ + + E G R D R RY +D+ H Sbjct: 405 HRLSGELACFYHYDRLVPEGKVLAHRNSLGEEWHFEYGQGYTRVTDVLGRQTRYEFDANH 464 Query: 52 RLVHYTRTQYAEP-----------------LVESRYLYDPLGRRVAKRVWRRERDLTGWM 94 L +T + Y YD G T Sbjct: 465 DLTGFTDASGGHTRLKLNGRGQPLKVIEPLGRTTHYRYDERGN------------TTAIT 512 Query: 95 SLSRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLAD 154 + + Q Y + L D + LIR A G + + + Sbjct: 513 APDGQMQRIDYHPQWN-LPVRITDMAGNLREFTYDVVGNLIREMDALGRITEYNHDDEGN 571 Query: 155 TLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPV 214 ++ G + +L + + + + WL Sbjct: 572 LVRICDAASGIQRFSWNSVGFLLAHTDCSGSQTKYAYDKYGWL--------------KER 617 Query: 215 YTPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRLP 270 A ++ +H G PL + +G T EYD W L+ + +L Sbjct: 618 TDAAGQMTRFHHGRDGQPLIVTQADGTT-ESFEYDRWRRLIAFTDAEGRATRWQLA 672 >UniRef50_Q4K3M9 Rhs family protein n=5 Tax=Pseudomonas RepID=Q4K3M9_PSEF5 Length = 1486 Score = 207 bits (527), Expect = 7e-52, Method: Composition-based stats. Identities = 88/355 (24%), Positives = 132/355 (37%), Gaps = 32/355 (9%) Query: 6 RIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPL 65 R YDR GRL + YD LV ++A Sbjct: 1015 RTQGQISTRSEYDRCGRLRARLQHSSLLANTLPTAPERHLEYDDSDNLVGLA-ERHATGQ 1073 Query: 66 VESRYLYDPLGRRVAKRV-WRRERDLTGWMSLSR------------------KPQVTWYG 106 + YD GR +A + + +++ + + + Q Y Sbjct: 1074 HRQLFHYDATGRIIASQDGLQGQKETFAYDAAANLLDGPKAGAGLVVHNKLLTYQDKRYR 1133 Query: 107 WDGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGE---LAKTQRRSLADTLQQSGGED 163 +D + R + + LI V T L + + L + +S + Sbjct: 1134 YDAFGRMIEKRSGRRGVQRFAYDAEHRLIEVRNQTSSGETLVRMRYDVLGRRISKSEYDS 1193 Query: 164 GGSVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHL 223 G+++ V RL E + S L L ++D + +KI Sbjct: 1194 QGNLLGETRFVWDGLRLLQEQRNQQTSLYVYEDLGHAPLA------RVDGLGAQ-QKIRY 1246 Query: 224 YHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQL--QQLIRLPGQQYDEESGLY 281 YH D GLP L +G + W A Y WGN + E +Q +R GQ D E+GL+ Sbjct: 1247 YHNDLNGLPQQLCEPDGHSVWQARYQVWGNTVEEIREPYYIEEQNLRFQGQYLDRETGLH 1306 Query: 282 YNRHRYYDPLQGRYITQDPIGLKGGWNFYQYPLNPVQYIDSMGLASKYGHLNNGG 336 +N R+YDP GR+ T DPIGL GG N YQY NP+ +ID +G K + G Sbjct: 1307 FNTFRFYDPDIGRFTTPDPIGLAGGLNLYQYAPNPIGWIDPLGWICKSAYSGRRG 1361 Score = 67.9 bits (164), Expect = 8e-10, Method: Composition-based stats. Identities = 47/274 (17%), Positives = 83/274 (30%), Gaps = 30/274 (10%) Query: 13 YLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYLY 72 + + D GRL K TDD R+ Y YD ++L + T + Y Sbjct: 895 HRFERDAVGRLLAKI---------TDDGRSQ-YTYDPLNQLTAASFTDNLGNQQALSFSY 944 Query: 73 DPLGRRVAKRVWRRE----RDLTGWMSLSRKPQVTWYG---WDGDRLTTIQNDRTRIQTI 125 D LG+ + + D G ++ ++ P W + L I D + Sbjct: 945 DALGQLLEEHTVAGSLIHRYDELGNLTQTQLPDKRWLNRLYYGSGHLHQINLDGQVVSDF 1004 Query: 126 YQPGSFTPLIRVETATGELAKTQR-RSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEI 184 + ++R + ++ R L LQ S P ++ D Sbjct: 1005 QRDRLHREVLRTQGQISTRSEYDRCGRLRARLQHSSLLANTLPTAPERHLEYDDSDNLVG 1064 Query: 185 LADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATE- 243 LA+R + R L T + +Q + + P A G Sbjct: 1065 LAERHATGQHRQLFHYDATGRIIASQDGLQGQKETFAYDAAANLLDGPKA---GAGLVVH 1121 Query: 244 --------WCAEYDEWGNLLNEENPHQLQQLIRL 269 YD +G ++ + + + Q Sbjct: 1122 NKLLTYQDKRYRYDAFGRMIEKRSGRRGVQRFAY 1155 Score = 62.9 bits (151), Expect = 3e-08, Method: Composition-based stats. Identities = 65/344 (18%), Positives = 106/344 (30%), Gaps = 73/344 (21%) Query: 1 MWPDN-----RIARDAHYL----YRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQH 51 +WP R+ D Y YD G L + D ++ + R+ YD+ H Sbjct: 474 LWPGRIAQVERLYPDQQREVLVSYDYDAAGDLAQVRD--------SEGQVQRRFAYDAGH 525 Query: 52 RLVH----------YTRTQYAEPLVES---------RYLYD---PLG--------RRVAK 81 R++ Y TQ+A+ Y YD G +R+++ Sbjct: 526 RMIEHQLATGLRCFYQWTQFADQQWRVTRHWTDEGDSYQYDYDLEAGITQVTDSLQRLSR 585 Query: 82 RVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETAT 141 R W + + + Q + W+ +R D + Y LI Sbjct: 586 RRWNSQLQIVEY--TDNLNQTWAFEWNDERQLLSATDPLGGRYAYSYDETGNLIAETDPL 643 Query: 142 GELAKT---QRRSLADTLQQSGGEDGGSVVFP---------PVLVQMLDRLESEILADRV 189 G T + SL TL GE P P+ R ++ + Sbjct: 644 GHSHSTLWLEHWSLPQTLTDPAGESWHLRYDPRGNCIAEVDPLGQVTQYRHDAHGQVVEI 703 Query: 190 SEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWCAEYD 249 + + R + Q+ +D P R + D RG A++ G YD Sbjct: 704 IDAAGRSRKMRWNSSGQLLEHLDCSGYPTR----FEYDRRGNVKAIIDALGEHT-RFHYD 758 Query: 250 EWGNLLNEENPHQLQQLIRLP--GQ---QYDEE--SGLYYNRHR 286 G LL+ + + + GQ D + LY R Sbjct: 759 CQGRLLSSQLADGRAEHFQRSSNGQLQGYTDPSGYTTLYQYNRR 802 Score = 44.0 bits (102), Expect = 0.013, Method: Composition-based stats. Identities = 41/264 (15%), Positives = 64/264 (24%), Gaps = 45/264 (17%) Query: 39 DERTHRYHYDSQHRL--------------------------VHYTRTQYAEPLVESRYLY 72 ++ YDS RL V ++ S Y Y Sbjct: 441 NDNRLHLEYDSSGRLWLLRDTFEQAQLELSYSTLWPGRIAQVERLYPDQQREVLVS-YDY 499 Query: 73 DPLGR----RVAKRVWRRERDLTGWMSLSRKPQVT----WYGWDGDRLTTIQNDRTRIQT 124 D G R ++ +R + T +Y W Q R Sbjct: 500 DAAGDLAQVRDSEGQVQRRFAYDAGHRMIEHQLATGLRCFYQWTQF---ADQQWRVTRHW 556 Query: 125 IYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEI 184 + S+ +E G T + + + + Sbjct: 557 TDEGDSYQYDYDLE--AGITQVTDSLQRLSRRRWNSQLQIVEYTDNLNQTWAFEWNDERQ 614 Query: 185 LADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEW 244 L R+ S T + + DP+ + L H P L G W Sbjct: 615 LLSATDPLGGRYAYSYDET-GNLIAETDPLGHSHSTLWLEHWSL---PQTLTDPAGE-SW 669 Query: 245 CAEYDEWGNLLNEENPHQLQQLIR 268 YD GN + E +P R Sbjct: 670 HLRYDPRGNCIAEVDPLGQVTQYR 693 >UniRef50_B5JS46 NHL repeat containing protein n=2 Tax=gamma proteobacterium HTCC5015 RepID=B5JS46_9GAMM Length = 2515 Score = 207 bits (527), Expect = 7e-52, Method: Composition-based stats. Identities = 89/385 (23%), Positives = 136/385 (35%), Gaps = 47/385 (12%) Query: 15 YRYDRHGRLTEKTDLIPEGVIRTDDE-------RTHRYHYDSQHRLVHYTRTQYAEPLVE 67 Y D+ GR+T+KT+ +P E T Y YD+ RL TR Sbjct: 2115 YIRDKLGRITQKTEKLPSPTSGEAGEEPGERVETTTVYGYDTAGRLQTVTR-----NGAT 2169 Query: 68 SRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYG-------WDGDRLTTIQNDRT 120 Y YD G R++K + T + ++T YG +GD + + Sbjct: 2170 ITYSYDANGNRLSK----ADPSGTVTGQYDEQDRLTQYGNNSYEYNANGDLMAK---NTQ 2222 Query: 121 RIQTIYQPGSFTPL--IRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQML- 177 Y F L + + A+ + D L +V + L Sbjct: 2223 AGTIEYDYDVFGNLISATIPSPLAGEAQGEGAVEIDYLIDGQNRRVAKLVNGTQVQGFLY 2282 Query: 178 -DRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALV 236 D+L D R++ + + + + DH G P +V Sbjct: 2283 KDQLNPIAELDGSGNVVSRFVYADKANIPSY-------MIKGGQTYRIISDHLGSPRMVV 2335 Query: 237 S-TEGATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEESGLYYNRHRYYDPLQGRY 295 + +GA YDE+G ++ + NP Q G YD+ + L R YD GR+ Sbjct: 2336 NTADGAIAQQMSYDEFGQVVEDSNPGF--QPFGFAGGIYDQHTKLTRFGARDYDAETGRW 2393 Query: 296 ITQDPIGLKGGWNFYQYPLN-PVQYIDSMGLASKYGHLN------NGGYGARPNKPPTPD 348 T+DPI +GG N + Y N PV ++D GL + + AR N P P Sbjct: 2394 TTKDPIRFEGGLNLFGYVANDPVNWVDIWGLEGEQATVELVNPRGADWSEARENNPHLPG 2453 Query: 349 PSKLPDIAKQLRLPYPIDQASSAPN 373 P D A + D + PN Sbjct: 2454 PQYPGDYATEYTDKAERDVCVTCPN 2478 Score = 52.1 bits (123), Expect = 5e-05, Method: Composition-based stats. Identities = 37/226 (16%), Positives = 75/226 (33%), Gaps = 28/226 (12%) Query: 6 RIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPL 65 ++A Y+YD GRL + G D ++ Y++ ++ ++ Sbjct: 1819 QVAGFHTLHYQYDNKGRLAAMSSKNAAGTALRDA----QFTYNTLGKVSLFSDAL----Q 1870 Query: 66 VESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVT-------WYGWDG-DRLTT--- 114 E+ Y YD GR + + L + + ++T + ++G D+ T Sbjct: 1871 RETHYEYDVAGRVTRMTLPGQREVLYDYDANGNLTRLTPPGKTAHVFHYNGVDQETGYIP 1930 Query: 115 ---IQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDG-GSVVFP 170 + T YQ L ++ G+ + Q + L G S + Sbjct: 1931 PSPSTGEGDTYATHYQYNLDQQLTQMTRPDGQQVQLQYGATTGNLDSVQTPRGTYSYTYD 1990 Query: 171 PVLVQML-----DRLESEILADRVSEESRRWLASCGLTVEQMQNQM 211 P + Q+ D + + + D ++ W +V N Sbjct: 1991 PNIGQLSSVTSPDSVTVQTVYDGFLVTAQHWSGPISGSVSWQYNND 2036 Score = 49.4 bits (116), Expect = 3e-04, Method: Composition-based stats. Identities = 51/298 (17%), Positives = 94/298 (31%), Gaps = 37/298 (12%) Query: 15 YRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDS-----QHRLVHYTRTQYAEPLVESR 69 Y YD GRL T+ G + + Y++ + R+ YT + + R Sbjct: 1634 YEYDAMGRLLRTTNEEEGGWQLSRQYDASQKGYEASIESREGRVRVYTVGEESGSSTLYR 1693 Query: 70 YLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVT---WYG----WDGDRLTTIQND---- 118 Y L +++ +RV +LT + Q +G + R+ + Sbjct: 1694 TTYPNLTQKI-RRVIGSTTELTQTNGMVVTSQTAPDPRFGRSAKYTASRVLETPSGLIYN 1752 Query: 119 --RTRIQTIYQPG---SFTPLIRVETATGELAKT---------QRRSLADTLQQSGGEDG 164 R + T+ S T L T G ++ + S ++ + + Sbjct: 1753 EQRNKSATLADDNDLLSHTKLTETRTVNGRTSQALFTRADNNWRFESPEGRVRNTQVDGA 1812 Query: 165 GSVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVY---TPARKI 221 G V V + + + S+ + + N + V ++ Sbjct: 1813 GRPVNVQVAGFHTLHYQYDNKGRLAAMSSKNAAGTALRDAQFTYNTLGKVSLFSDALQRE 1872 Query: 222 HLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEESG 279 Y D G + G E +YD GNL P + + G D+E+G Sbjct: 1873 THYEYDVAGRVTRMTLP-GQREVLYDYDANGNLTRLTPPGKTAHVFHYNG--VDQETG 1927 Score = 43.6 bits (101), Expect = 0.018, Method: Composition-based stats. Identities = 40/215 (18%), Positives = 65/215 (30%), Gaps = 26/215 (12%) Query: 6 RIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRT------ 59 R+ + + Y Y+ +G L K T Y YD L+ T Sbjct: 2199 RLTQYGNNSYEYNANGDLMAKNTQAG----------TIEYDYDVFGNLISATIPSPLAGE 2248 Query: 60 QYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSL--------SRKPQVTWYGW-DGD 110 E VE YL D RRVAK V + + V+ + + D Sbjct: 2249 AQGEGAVEIDYLIDGQNRRVAKLVNGTQVQGFLYKDQLNPIAELDGSGNVVSRFVYADKA 2308 Query: 111 RLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFP 170 + + + I +P + V TA G +A+ + + F Sbjct: 2309 NIPSYMIKGGQTYRIISDHLGSPRMVVNTADGAIAQQMSYDEFGQVVEDSNPGFQPFGFA 2368 Query: 171 PVLVQMLDRLESEILADRVSEESRRWLASCGLTVE 205 + +L + A E+ RW + E Sbjct: 2369 GGIYDQHTKL-TRFGARDYDAETGRWTTKDPIRFE 2402 Score = 41.3 bits (95), Expect = 0.070, Method: Composition-based stats. Identities = 37/246 (15%), Positives = 68/246 (27%), Gaps = 9/246 (3%) Query: 24 TEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYLYDPLGRRVAKRV 83 T + Y YD+ RL+ T + E + YD + + Sbjct: 1613 VSYTQGGLLTAFTYPNNNQSFYEYDAMGRLLRTTNEE--EGGWQLSRQYDASQKGYEASI 1670 Query: 84 WRRERDLTGWMSLSRKPQVTWYGWDGDRLTT-IQNDRTRIQTIYQPGSFTPLIRVETATG 142 RE + + T Y LT I+ + Q V T+ Sbjct: 1671 ESREGRVRVYTVGEESGSSTLYRTTYPNLTQKIRRVIGSTTELTQTNGM-----VVTSQT 1725 Query: 143 ELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGL 202 RS T + G + ++++L+ E+R Sbjct: 1726 APDPRFGRSAKYTASRVLETPSGLIYNEQRNKSATLADDNDLLSHTKLTETRTVNGRTSQ 1785 Query: 203 TVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQ 262 + + +P ++ D G P+ + G +YD G L + + Sbjct: 1786 ALFTRADNNWRFESPEGRVRNTQVDGAGRPVNVQ-VAGFHTLHYQYDNKGRLAAMSSKNA 1844 Query: 263 LQQLIR 268 +R Sbjct: 1845 AGTALR 1850 >UniRef50_C9Y459 Putative uncharacterized protein n=1 Tax=Cronobacter turicensis RepID=C9Y459_CROTZ Length = 1523 Score = 207 bits (527), Expect = 7e-52, Method: Composition-based stats. Identities = 86/350 (24%), Positives = 139/350 (39%), Gaps = 28/350 (8%) Query: 12 HYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYL 71 YR+DR ++ ++ + + + YD+ ++ EP E R+ Sbjct: 1088 ERRYRWDRTDQIVQQIHTDSTPATPGEKYSQYLWGYDAAGQVTKAV-----EPQKEERFF 1142 Query: 72 YDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDG-DRLTTIQN-DRTRIQTIYQPG 129 +D G R + W +L + +DG RLT Q+ Y Sbjct: 1143 WDAAGNRTEEHR------NPVWHNLLLRLDGLKLDYDGFGRLTRRQDKSGVVQHFAYDDE 1196 Query: 130 SFTPLIRVETATGELAKTQRRSLADT-----LQQSGGEDGGSVVFPPVLVQMLDRLESEI 184 IR E T R L + G +D ++ F +Q+ Sbjct: 1197 QRVKEIRFEGNTKFRRVEYRYDPLGRRTHKILWRYGEKDPETIRFDWQGLQLAGEQ---- 1252 Query: 185 LADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEW 244 +DR + +++ + G + +D VY +I+ YH + GLP + G T W Sbjct: 1253 -SDREPDHYVQYVYTEGSYEPLAR--VDSVYDDC-EIYWYHTELNGLPERVTDANGQTVW 1308 Query: 245 CAEYDEWGNLLNEENPHQLQ--QLIRLPGQQYDEESGLYYNRHRYYDPLQGRYITQDPIG 302 ++ WG E + Q Q Q +R GQ D ESGL+YN RYYDP+ GRY DPIG Sbjct: 1309 RGQFSTWGETERELSVPQWQVPQNLRFQGQYLDRESGLHYNLFRYYDPVAGRYTQMDPIG 1368 Query: 303 LKGGWNFYQYPLNPVQYIDSMGLASKYGHLNNGGYGARPNKPPTPDPSKL 352 L GG N Y Y +P+ ++D +GL + G + + + + + Sbjct: 1369 LLGGINTYGYVPDPLTWVDPLGLCFSKRLGDFGESHVKSQLERSGNYADV 1418 Score = 98.7 bits (244), Expect = 4e-19, Method: Composition-based stats. Identities = 49/233 (21%), Positives = 79/233 (33%), Gaps = 24/233 (10%) Query: 1 MWPDNRIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQ 60 +W N + R YD GRLT + D + YD + R V R + Sbjct: 1157 VW-HNLLLRLDGLKLDYDGFGRLTRRQDK---------SGVVQHFAYDDEQR-VKEIRFE 1205 Query: 61 YAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDR- 119 Y YDPLGRR K +WR + P+ + W G +L Q+DR Sbjct: 1206 GNTKFRRVEYRYDPLGRRTHKILWRYG---------EKDPETIRFDWQGLQLAGEQSDRE 1256 Query: 120 --TRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQML 177 +Q +Y GS+ PL RV++ + + + L + + G V+ Sbjct: 1257 PDHYVQYVYTEGSYEPLARVDSVYDDCEIYWYHTELNGLPERVTDANGQTVWRGQFSTWG 1316 Query: 178 DRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRG 230 + + ++ R+ + + Y P D G Sbjct: 1317 ETERELSVPQWQVPQNLRFQGQYLDRESGLHYNLFRYYDPVAG-RYTQMDPIG 1368 Score = 58.3 bits (139), Expect = 6e-07, Method: Composition-based stats. Identities = 45/281 (16%), Positives = 71/281 (25%), Gaps = 34/281 (12%) Query: 6 RIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTH------------RYHYDSQHRL 53 R A Y YD G L + D T + R R YD RL Sbjct: 803 RRADGRETHYEYDNAGLLCGQDDDGLRERKVTRNARGQVVSAADPAGHLTRLRYDRFGRL 862 Query: 54 VHYTRTQYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSR--------------K 99 R+ YD GR +R + +L + Sbjct: 863 TTLVNPNRES----WRFEYDAAGRLTGQRDYAGRLTEYRHDALGQVTEVIRHPLPGSPDA 918 Query: 100 PQVTWYGWDGD-RLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADT-LQ 157 P VT + +D RLT + R + + S + +R D L Sbjct: 919 PLVTAFEYDVLGRLTARETAEHRTEYRHDTLSLEIRRATRAEWRQALLEEREPAWDAVLV 978 Query: 158 QSGGEDGGSVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTP 217 + G V + ++ + R LA+ + Sbjct: 979 FTRNAAGELVSEENHGGKFEYEYDALGNLSSTTFPDGRELATLRYGTGHLLEMQLRHGGA 1038 Query: 218 ARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEE 258 + Y D + ++G YD G + Sbjct: 1039 THTLAAYGRDRL--HREISRSQGVLSQETRYDSAGRVTQRT 1077 Score = 53.7 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 46/276 (16%), Positives = 81/276 (29%), Gaps = 52/276 (18%) Query: 9 RDAHYLYRYDRHGRLTEKTDLIPEGVIRT-------------DDERTHRYHYDSQHRLVH 55 + ++Y YD HG LTE D + T D +Y Y+++ +V Sbjct: 658 DGSRWVYGYDEHGNLTEVRDPLGNSTFTTWHPVFAFPVKEVLPDGAAWQYEYNARGDVVA 717 Query: 56 YTRTQYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGD-RLTT 114 T + +R+ ++ G + W+ +L Sbjct: 718 LTDPKGG----VTRFEWNEQG--------------DLVQQTDALNNTHRFWWNERGQLVR 759 Query: 115 IQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSL--ADTLQQSGGEDGGSVVFPPV 172 ++ + PL +A+ T R +L A L+ DG + Sbjct: 760 DEDCSGNQSQRLYDDAGRPL----SASDAEGNTDRWALTAAGRLRTWRRADGRETHYEYD 815 Query: 173 LVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLP 232 +L + + L +R + Q+ PA + D G Sbjct: 816 NAGLLCGQDDDGLRER-------------KVTRNARGQVVSAADPAGHLTRLRYDRFGRL 862 Query: 233 LALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIR 268 LV+ W EYD G L + + R Sbjct: 863 TTLVNPN-RESWRFEYDAAGRLTGQRDYAGRLTEYR 897 Score = 48.3 bits (113), Expect = 7e-04, Method: Composition-based stats. Identities = 50/350 (14%), Positives = 90/350 (25%), Gaps = 58/350 (16%) Query: 15 YRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYLYDP 74 Y +D HGRL + + E++H RL + E + Y Y+ Sbjct: 477 YSWDEHGRLARISGDNEALDVELAYEKSH-------GRLASVHQVCNGERRLLVTYGYNE 529 Query: 75 LGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWD--GDRLT-TIQNDRTRIQTIYQPGSF 131 G+ + +GWD D + + + +QP + Sbjct: 530 NGQLIEVTDADGIV-------------TRRFGWDRASDMMGWHSYSTNLSVHYQWQPAAD 576 Query: 132 TPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSE 191 P RV + + + R++E Sbjct: 577 APNWRVCSYQVLDDQDNVLERWRIDADEAKRCATVSCDAGFSTRHCWDFLY-----RITE 631 Query: 192 ESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGA---------- 241 + R + TP +Y D G + G Sbjct: 632 YTDRHGGVWRYEWADYAELLKAATTPDGSRWVYGYDEHGNLTEVRDPLGNSTFTTWHPVF 691 Query: 242 -----------TEWCAEYDEWGNLLNEENPHQLQQLIRL--PG---QQYDEESGLYYNRH 285 W EY+ G+++ +P G QQ D N H Sbjct: 692 AFPVKEVLPDGAAWQYEYNARGDVVALTDPKGGVTRFEWNEQGDLVQQTDA----LNNTH 747 Query: 286 RYYDPLQGRYITQDPIGLKGGWNFYQYPLNPVQYIDSMGLASKYGHLNNG 335 R++ +G+ + + Y P+ D+ G ++ G Sbjct: 748 RFWWNERGQLVRDEDCSGNQSQRLYDDAGRPLSASDAEGNTDRWALTAAG 797 Score = 44.0 bits (102), Expect = 0.013, Method: Composition-based stats. Identities = 41/257 (15%), Positives = 77/257 (29%), Gaps = 32/257 (12%) Query: 14 LYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYLYD 73 Y Y+ +G+L E TD D T R+ +D ++ + + Y + Sbjct: 524 TYGYNENGQLIEVTDA--------DGIVTRRFGWDRASDMMGWHSY---STNLSVHYQWQ 572 Query: 74 PLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWD-GDRLTTIQNDRTRIQTIYQPGSFT 132 P A R + D R T+ D + Sbjct: 573 PA----ADAPNWRVCSYQVLDDQDNVLERWRIDADEAKRCATVSCDAGFSTRHCWDFLYR 628 Query: 133 PLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSEE 192 + G + + + A+ L+ + DG V+ +E+ + Sbjct: 629 -ITEYTDRHGGVWRYEWADYAELLKAATTPDGSRWVYGYDE----HGNLTEVRDPLGNST 683 Query: 193 SRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWG 252 W V+++ P Y + RG +AL +G E++E G Sbjct: 684 FTTWHPVFAFPVKEVL--------PDGAAWQYEYNARGDVVALTDPKGGVT-RFEWNEQG 734 Query: 253 NLLNEENPHQLQQLIRL 269 +L+ + + L R Sbjct: 735 DLVQQTD--ALNNTHRF 749 >UniRef50_A7FN18 RHS/YD repeat protein n=5 Tax=cellular organisms RepID=A7FN18_YERP3 Length = 1419 Score = 206 bits (525), Expect = 1e-51, Method: Composition-based stats. Identities = 95/401 (23%), Positives = 147/401 (36%), Gaps = 57/401 (14%) Query: 16 RYDRHGRL---TEKTDLIPEGVIRTDDERTHR-YHYDSQHRLVHYTRTQYAEPLVESRYL 71 +YD GR + + + E + + R YHYD H L + Y Sbjct: 954 QYDVLGRRRWQSSISSRLTEALTTPEQGILWRAYHYDELHELAAVEDSNRG----MLSYG 1009 Query: 72 YDPLGRRVA-------KRVWRRERDLTGWMSLSRKPQVTWYGWDG-----DRLTTIQNDR 119 YD GR + + +R M + P+ + Y +RLT + Sbjct: 1010 YDEEGRLRSTVSPHSGQTTVHYDRADNALMLPLQTPESSPYARSSQPYCDNRLTRWE--- 1066 Query: 120 TRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDR 179 Q Y +F L E G + R + L + G+ + L R Sbjct: 1067 ---QWQYHYDAFGNLS--ERLEGYRTQRYRYDGDNRLVGAKGDGQKGLFEAQYHYDALGR 1121 Query: 180 LESEILADRVSEESRRWLASCGLTVEQMQNQM--------DPVYTP---------ARKIH 222 S+++ + +L ++ ++ + YTP ++ Sbjct: 1122 RLSKVVRTPQGNQETHFLWQGLRLLQSRTDESQQTYCYDPNEAYTPLACIERRYGEDTLY 1181 Query: 223 LYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENP---------HQLQQLIRLPGQQ 273 YH D G P + + +G W +Y +G + + + Q +Q +R GQ Sbjct: 1182 WYHTDLNGSPQEVTNAQGEMVWSGQYGVFGQVTRQTDAMWRNVSKPLGQFRQPLRYAGQY 1241 Query: 274 YDEESGLYYNRHRYYDPLQGRYITQDPIGLKGGWNFYQYPLNPVQYIDSMGLASKY---G 330 D+E+GL+Y +RYY P GR+IT DPIGL GG N YQY NP+ +ID GLA Sbjct: 1242 LDDETGLHYTTYRYYAPEVGRFITPDPIGLAGGLNLYQYAPNPLGWIDPWGLAGSPTTAT 1301 Query: 331 HLNNGGYGARPNKPPTPDPSKLPDIAKQLRLPYPIDQASSA 371 H+ G A KP S + Q L Y S Sbjct: 1302 HITYQGIDAITGKPYVGYASMQGNQIAQDVLKYRYANDFSR 1342 Score = 60.6 bits (145), Expect = 1e-07, Method: Composition-based stats. Identities = 46/274 (16%), Positives = 81/274 (29%), Gaps = 30/274 (10%) Query: 11 AHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRY 70 +RYD G+L + D + + + RYH+D RL T + ++ Sbjct: 660 QPTQWRYDALGQLLLRRDALQQEI---------RYHWDPVGRLTKVTLPDGS----TEQF 706 Query: 71 LYDPLGRRVAKR-------VWRRERDLTGWMSLSRKPQVTWYGWDGD-RLTTIQNDRTRI 122 + P G+ V + W + R +V Y +D + RL + ND Sbjct: 707 DWSPAGQLVRHQQGHNQPRHWHYSVRGQILSTTDRLSRVIRYRYDAEGRLVHLDNDNG-G 765 Query: 123 QTIYQPGSFTPLIRVETATGELAKTQRR---SLADTLQQSGGEDGGSVVFPPVLVQMLDR 179 Q + + L+ + D Q+ E+ S P + Sbjct: 766 QYHFNRDAEGRLLEEQRPDDTRYSYTYNADGQATDITQRGLSENHASPPEKPTRLTYDAV 825 Query: 180 LESEILADRVSEESRRW--LASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVS 237 + +W + + + Q + + + D G + Sbjct: 826 GRLIARHTLTEQTCYQWDKMGNLLSAIRTPTEQGEKLGILTNTVTF-ERDALGRITQEHN 884 Query: 238 TEGATEWCAEYDEWGNLLNEENPHQLQQLIRLPG 271 GA YD GNL E P+ G Sbjct: 885 --GAEALAYHYDALGNLTRLELPNDDHFQWLHYG 916 Score = 55.2 bits (131), Expect = 5e-06, Method: Composition-based stats. Identities = 49/266 (18%), Positives = 83/266 (31%), Gaps = 23/266 (8%) Query: 9 RDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVES 68 D Y Y Y+ G+ T+ T + E+ R YD+ RL+ ++ Sbjct: 784 DDTRYSYTYNADGQATDITQRGLSENHASPPEKPTRLTYDAVGRLIARHTLTE-----QT 838 Query: 69 RYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGD-RLTTIQNDRTRIQTIYQ 127 Y +D +G ++ E L + D R+T N + Y Sbjct: 839 CYQWDKMGNLLSAIRTPTE----QGEKLGILTNTVTFERDALGRITQEHNGAEALAYHYD 894 Query: 128 PGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILAD 187 + L R+E + + + S L + R + + Sbjct: 895 --ALGNLTRLELPNDDHFQWLHYGSGHVSAIRFNDQLVSEFERDALHRETRRTQGILTQQ 952 Query: 188 RVSEE--SRRWLASCGLTVEQMQNQMDPVYTPARKIHL--YHCDHRGLPLALVSTEGATE 243 R + RRW +S + + TP + I YH D A+ + Sbjct: 953 RQYDVLGRRRWQSSISSRLTEALT------TPEQGILWRAYHYDELHELAAVEDSNRGML 1006 Query: 244 WCAEYDEWGNLLNEENPHQLQQLIRL 269 YDE G L + +PH Q + Sbjct: 1007 -SYGYDEEGRLRSTVSPHSGQTTVHY 1031 Score = 52.1 bits (123), Expect = 4e-05, Method: Composition-based stats. Identities = 45/261 (17%), Positives = 76/261 (29%), Gaps = 35/261 (13%) Query: 6 RIARDAHYLYRYDRHGRLTEKTDLIPE-------------GVIRTDDERTHRYHYDSQHR 52 R R ++D GRL TD + D R +D+Q R Sbjct: 547 RSPRGHQRQCQWDELGRLVSVTDANGAETRWQYERNTDRQTFVFWPDGTQERQQWDAQGR 606 Query: 53 LVHYTRTQYAEPLVESRYLY------------DPLGRRVAKRVWRRERDLTGWMSLSRKP 100 L+ T + Y Y D LG + ++ +W ++ LTG+ S +P Sbjct: 607 LLQETDRLGQS----THYTYPHPRTLLPDSITDALGGQ-SQLLWSQQGQLTGYTDCSGQP 661 Query: 101 QVTWYGWDGDRLTTIQNDRTRIQTIYQP-GSFTPLIRVETATGELAKTQRRSLADTLQQS 159 Y G L + I+ + P G T + + +T + + L Q Sbjct: 662 TQWRYDALGQLLLRRDALQQEIRYHWDPVGRLTKVTLPDGSTEQFDWSPAGQLVRHQQGH 721 Query: 160 GGEDGGSVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDP----VY 215 ++ DRL I +E L + + Sbjct: 722 NQPRHWHYSVRGQILSTTDRLSRVIRYRYDAEGRLVHLDNDNGGQYHFNRDAEGRLLEEQ 781 Query: 216 TPARKIHLYHCDHRGLPLALV 236 P + Y + G + Sbjct: 782 RPDDTRYSYTYNADGQATDIT 802 Score = 47.1 bits (110), Expect = 0.001, Method: Composition-based stats. Identities = 49/321 (15%), Positives = 93/321 (28%), Gaps = 54/321 (16%) Query: 6 RIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDD-ERTHRYHYDSQHRLVHYTRTQYAEP 64 R Y++D+ G L E + T + D+ R+ TQ Sbjct: 831 RHTLTEQTCYQWDKMGNLLSAIRTPTEQGEKLGILTNTVTFERDALGRI-----TQEHNG 885 Query: 65 LVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTI-QNDRTRIQ 123 Y YD LG + + + + D+L + + D + Sbjct: 886 AEALAYHYDALGNLTRLELPNDDHFQWLHYGSGHVSAIRF----NDQLVSEFERDALHRE 941 Query: 124 TIYQPGSFTPLIRVE---------------------TATGELAKTQRRSLADTLQQSGGE 162 T G T + + G L + L Sbjct: 942 TRRTQGILTQQRQYDVLGRRRWQSSISSRLTEALTTPEQGILWRAYHYDELHELAAVEDS 1001 Query: 163 DGGSVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIH 222 + G + + L S + + + + + +Q Y + + + Sbjct: 1002 NRGMLSYGYDEEGRLRSTVSP----HSGQTTVHYDRADNALMLPLQTPESSPYARSSQPY 1057 Query: 223 LYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLN-----EENPHQLQQLIRLPGQQYDEE 277 CD+R +W YD +GNL ++ RL G + D + Sbjct: 1058 ---CDNRLTRWE--------QWQYHYDAFGNLSERLEGYRTQRYRYDGDNRLVGAKGDGQ 1106 Query: 278 SGLYYNRHRYYDPLQGRYITQ 298 GL+ ++ +YD GR +++ Sbjct: 1107 KGLFEAQY-HYD-ALGRRLSK 1125 Score = 45.6 bits (106), Expect = 0.004, Method: Composition-based stats. Identities = 52/322 (16%), Positives = 91/322 (28%), Gaps = 65/322 (20%) Query: 3 PDNRIARDAH-----YLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYT 57 P ++ R + Y G++ TD + R RY YD++ RLVH Sbjct: 710 PAGQLVRHQQGHNQPRHWHYSVRGQILSTTDRL---------SRVIRYRYDAEGRLVHLD 760 Query: 58 RTQYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVT-------------- 103 + + D GR + ++ R + + + +T Sbjct: 761 NDNGG----QYHFNRDAEGRLLEEQRPDDTRYSYTYNADGQATDITQRGLSENHASPPEK 816 Query: 104 ----WYGWDGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGE-------LAKTQRRSL 152 Y G + + G+ IR T GE +R +L Sbjct: 817 PTRLTYDAVGRLIARHTLTEQTCYQWDKMGNLLSAIRTPTEQGEKLGILTNTVTFERDAL 876 Query: 153 ADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMD 212 Q+ G + + + + L ++ + S A + + D Sbjct: 877 GRITQEHNGAEALAYHYDALGNLTRLELPNDDHFQWLHYGSGHVSAIRFNDQLVSEFERD 936 Query: 213 PVYTPARKIHLYHC-----DHRGL-----------PLALVSTEGATEWC-AEYDEWGNLL 255 ++ R+ D G AL + E W YDE L Sbjct: 937 ALHRETRRTQGILTQQRQYDVLGRRRWQSSISSRLTEALTTPEQGILWRAYHYDELHELA 996 Query: 256 NEENPHQLQQLIRLPGQQYDEE 277 E+ ++ YDEE Sbjct: 997 AVEDSNRGMLSYG-----YDEE 1013 >UniRef50_A7FDJ9 RHS/YD repeat protein n=30 Tax=Enterobacteriaceae RepID=A7FDJ9_YERP3 Length = 1418 Score = 206 bits (523), Expect = 2e-51, Method: Composition-based stats. Identities = 78/346 (22%), Positives = 135/346 (39%), Gaps = 27/346 (7%) Query: 13 YLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYLY 72 + +D G L+ TD I +Y YD++ RL + + V + Y Sbjct: 978 RKFSFDTAGELSMATDFI---------RGEQQYRYDAEGRLTDS--RERHQLSVAEDFAY 1026 Query: 73 DPLGRRVAKRVWRRERDLTGWMSLSRKPQVT-----WYGWDGDRLTTIQNDRTRIQTIYQ 127 D + R + + + ++T + +D T ++ R+Q + Sbjct: 1027 DNADNLLNLRKLPFDTVDPLYDTPVANNRLTQWQHYRFEYDAWGNMTTRHAGGRMQH-FA 1085 Query: 128 PGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLES--EIL 185 L+R TG L + D L + + + D + +L Sbjct: 1086 YDDDNRLLRA-WGTGPLGEHDSHYRYDALGRRIHKSVTIKRGAEKTTRQTDFIWQGLRLL 1144 Query: 186 ADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWC 245 ++ ++ + ++ + + +++ +H D G PL + EG W Sbjct: 1145 QEQHADGNATYIYDPNESYTPLARVDQRHGETESQVYYFHTDINGTPLDVTDGEGKHRWS 1204 Query: 246 AEYDEWGNLLNE-------ENPHQLQQLIRLPGQQYDEESGLYYNRHRYYDPLQGRYITQ 298 +Y WG + + + Q +R PGQ D+E+GL+YN RYYDP GR+ TQ Sbjct: 1205 GKYHAWGKVTRQNVSDPRQSTVSRFAQPLRYPGQYSDDETGLHYNTFRYYDPEIGRFSTQ 1264 Query: 299 DPIGLKGGWNFYQYPLNPVQYIDSMGLASKYGHLNNGGYGARPNKP 344 DPIGL GG N YQY NP+ ++D +G + N G+ P Sbjct: 1265 DPIGLAGGINLYQYGPNPLGWVDPLGWMPWAWNPNGMGHHLIPRNK 1310 Score = 47.1 bits (110), Expect = 0.001, Method: Composition-based stats. Identities = 47/270 (17%), Positives = 74/270 (27%), Gaps = 39/270 (14%) Query: 15 YRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYLYDP 74 + YD G+L + + GV ++ RLV + P RY Y+ Sbjct: 375 FSYDDIGQLKKISTTSGYGVYCQYEK----------GRLVSVACVKGGTPGTLVRYQYNE 424 Query: 75 LGRRVAKRVWRRERDLTGWMSLSR---------KPQVTWYGW---DGDRLTTIQNDRTRI 122 + V+ V RE +T + Y W G T Sbjct: 425 QHQLVS--VTNREGQITRQFGYHGHLINKLADVRGLECRYTWADIGGTPRITHSATNLGE 482 Query: 123 QTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLES 182 Q + + + + DGG F + L Sbjct: 483 QWQFDYDIDNQQTTLTDLNTGQTACWGYNAQHLITDYRDFDGGKYAFDY------NDLNM 536 Query: 183 EILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHL-YHCDHRGLPLALVSTEGA 241 + E + Q+ + + R+IH+ YH + + +G Sbjct: 537 PVRVVLAGERTLVLAYDALARPIQITDPLK------REIHIDYHRNSL-RVMRRQYPDGQ 589 Query: 242 TEWCAEYDEWGNLLNEENPHQLQQLIRLPG 271 W EYD G LL E P PG Sbjct: 590 -VWKGEYDRTGRLLKENAPDGGVTRYHYPG 618 Score = 46.3 bits (108), Expect = 0.003, Method: Composition-based stats. Identities = 46/298 (15%), Positives = 87/298 (29%), Gaps = 51/298 (17%) Query: 5 NRIARDAHYLY--------RYDRHGRLTEKTDLIPEGVIRTDD------------ERTHR 44 NR+ + Y RY+ G + + TD + + + +R +R Sbjct: 681 NRLGQLTGVRYADGRKEQLRYNAQGLVEQFTDPVGRQLHWRYNLRGQPVSFTDRLQRQYR 740 Query: 45 YHYDSQHRLVHYTRTQYAEPLVESRYLYDPLGRRVAKRVWRR--ERDLTGWMSLSRKPQV 102 Y YD +++ + + + G+ V ++ R G + + Sbjct: 741 YRYDCHGQMIELDNANGG----QYHFRWSSGGQLVEEQYPDNLVRRYRYGESGMLMALET 796 Query: 103 TW-------------YGWD-GDRLTTIQNDRTRIQTIYQPGSFTPLI-RVETATGELAKT 147 T + +D G R+T + + + L RV TA GE A Sbjct: 797 TAPTVDDLTVSRQVSFDYDAGGRMTQRLTGMSATRYDWDIMDRLLLAERVPTAVGEQAGI 856 Query: 148 QRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQM 207 + ++G S V Q D L ++ WL V + Sbjct: 857 VGHGVRLAYDKAGHLLTESGDLGAVTYQ-WDPLHHLAALTLPDGQTLSWLRYGAGHVSAI 915 Query: 208 QNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQ 265 ++ + +R + T+G +YD G L + Sbjct: 916 RHGDTLISEFSRDNLH---------REVSRTQGILTQYRDYDAMGRRLWQSAGSDAPT 964 Score = 45.6 bits (106), Expect = 0.004, Method: Composition-based stats. Identities = 56/328 (17%), Positives = 101/328 (30%), Gaps = 45/328 (13%) Query: 8 ARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDD------------ERTHRYHYDSQHRLVH 55 A A + ++RHG+LTE TD + D Y Y+ +L Sbjct: 629 AVGAQTHFGWERHGQLTEHTDCSGKLTRYEYDIDGHLLTVIDAENHATHYSYNRLGQLTG 688 Query: 56 YTRTQYAEPLVE-------SRYLYDPLGRRVAKRVWRRERDLTGWMSLSRK--------- 99 + + ++ DP+GR++ R R + ++ L R+ Sbjct: 689 VRYADGRKEQLRYNAQGLVEQFT-DPVGRQLHWRYNLRGQPVSFTDRLQRQYRYRYDCHG 747 Query: 100 ---------PQVTWYGW-DGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQR 149 + W G +L Q ++ Y+ G L+ +ET + Sbjct: 748 QMIELDNANGGQYHFRWSSGGQLVEEQYPDNLVR-RYRYGESGMLMALETTAPTVDDLTV 806 Query: 150 RSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQN 209 +GG + D ++ +LA+RV G V + Sbjct: 807 SRQVSFDYDAGGRMTQRLTGMSATRYDWDIMDRLLLAERVPTAVGEQAGIVGHGVRLAYD 866 Query: 210 QMDPVYTPARKIHL--YHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLI 267 + + T + + Y D AL +G T Y G++ + L Sbjct: 867 KAGHLLTESGDLGAVTYQWDPLHHLAALTLPDGQTLSWLRYGA-GHVSAIRHGDTLISEF 925 Query: 268 -RLPGQQYDEESGLYYNRHRYYDPLQGR 294 R + + ++R YD GR Sbjct: 926 SRDNLHREVSRTQGILTQYRDYD-AMGR 952 Score = 43.6 bits (101), Expect = 0.015, Method: Composition-based stats. Identities = 49/304 (16%), Positives = 80/304 (26%), Gaps = 69/304 (22%) Query: 6 RIARDAHYLY--RYDRHGRLTEKTDLIPEGV-------------IRTDDERTHRYHYDSQ 50 R+ YD R + TD + + + D + + YD Sbjct: 539 RVVLAGERTLVLAYDALARPIQITDPLKREIHIDYHRNSLRVMRRQYPDGQVWKGEYDRT 598 Query: 51 HRLVHYTRTQYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGD 110 RL+ +RY Y + T +GW+ Sbjct: 599 GRLLKENAPDGG----VTRYHY-------------PGASSLPERITNAVGAQTHFGWERH 641 Query: 111 RLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFP 170 T D + T Y+ L+ V A L Sbjct: 642 GQLTEHTDCSGKLTRYEYDIDGHLLTVIDAENHATHYSYNRLGQ---------------- 685 Query: 171 PVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRG 230 + + +E R+ A ++ DPV R++H + RG Sbjct: 686 ----------LTGVRYADGRKEQLRYNAQG-----LVEQFTDPV---GRQLHW-RYNLRG 726 Query: 231 LPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRL-PGQQYDEESGLYYNRHRYYD 289 P++ + YD G ++ +N + Q R G Q EE RY Sbjct: 727 QPVSFTDRLQRQ-YRYRYDCHGQMIELDNANGGQYHFRWSSGGQLVEEQYPDNLVRRYRY 785 Query: 290 PLQG 293 G Sbjct: 786 GESG 789 >UniRef50_C6M5B1 Rhs-related protein n=7 Tax=Proteobacteria RepID=C6M5B1_NEISI Length = 1934 Score = 205 bits (521), Expect = 4e-51, Method: Composition-based stats. Identities = 88/341 (25%), Positives = 124/341 (36%), Gaps = 50/341 (14%) Query: 12 HYLYRYDRHGRLTE-------KTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYA-- 62 Y+YD G L + + + R Y YD H L +R Sbjct: 1541 GRRYQYDTIGNLVRTDDQTNGSRNYTYDALGRITQSADEHYRYDPAHNLTDGSRISGNRL 1600 Query: 63 EPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRI 122 + Y YDPLG + K+ ++ Y ++ D T Sbjct: 1601 TQYKGTSYRYDPLGNLIEKQ--------------QHDGEIQHYRYNADNQLTEAE----- 1641 Query: 123 QTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLES 182 I++PG T L R R DG + + ++L Sbjct: 1642 --IHRPGQNTVLYR-----------YRYDPIGRRIAKAHPDGNEIQYLWDGSRLLQEYRK 1688 Query: 183 EILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGAT 242 + + E R + L N D V R+I YH D G+P + EG Sbjct: 1689 DRTYTYIYTEDRNY---EPLAQITTYNGSDKV----REILYYHNDQIGIPREMTDEEGNI 1741 Query: 243 EWCAEYDEWGNLLNEEN-PHQLQQLIRLPGQQYDEESGLYYNRHRYYDPLQGRYITQDPI 301 W +Y WG L E + Q RL Q YDEE+GL+YN RYYDP GR+ QDPI Sbjct: 1742 VWSGDYSGWGKLTQEGRLKLDVYQPFRLQNQYYDEETGLHYNFFRYYDPEIGRFTQQDPI 1801 Query: 302 GLKGGWNFYQYPLNPVQYIDSMGLASKYGHLNNGGYGARPN 342 L GG + Y N ++D++GLA KY + + G Sbjct: 1802 KLLGGESLYALAPNVFVWLDTLGLA-KYKCIADEKEGGGTR 1841 Score = 62.1 bits (149), Expect = 5e-08, Method: Composition-based stats. Identities = 66/336 (19%), Positives = 107/336 (31%), Gaps = 65/336 (19%) Query: 14 LYRYDRHGRLTEKTDLIPEGV-IRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYLY 72 Y Y+ G L + + + +RT RT YH D R+ ++ + Y Y Sbjct: 1336 RYTYNPAGELIREEEYASGNIDVRTRPLRTITYHRDRIGRIRQKDSHLDGGEILSTHYRY 1395 Query: 73 DPLGRRV----AKRVWRRERDLTG-------------------WMSLSRKPQVTWYGWD- 108 D L R + A R D G S Q+T + +D Sbjct: 1396 DKLNRLIQAHNAHSELRFGYDHNGLIKEQLIHLDEPITSSTSRSQSKDVAAQITEHRYDV 1455 Query: 109 -GDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSV 167 G+R TI + +Y GS L + LA +R +L ++++ G+ Sbjct: 1456 LGNRTQTILPTGEVLNRLY-YGS-GHLHHINLDGTTLADIERDALHRPIERTIGKLNTQF 1513 Query: 168 VFPPV--LVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYH 225 P+ L Q + + S AD RR+ + + +Q + Y Sbjct: 1514 QLDPLGRLKQQIAQPNSHNKADPAVLIGRRYQYDTIGNLVRTDDQTNGSRN-------YT 1566 Query: 226 CDHRGLPLALVST-----------EGATEW----------CAEYDEWGNLLNEENPHQLQ 264 D G +G+ YD GNL+ ++ Sbjct: 1567 YDALGRITQSADEHYRYDPAHNLTDGSRISGNRLTQYKGTSYRYDPLGNLIEKQQHDGEI 1626 Query: 265 QLIRLPGQQYDEESGLYY-----NRHRY-YDPLQGR 294 Q R E+ ++ +RY YDP GR Sbjct: 1627 QHYRYNADNQLTEAEIHRPGQNTVLYRYRYDP-IGR 1661 Score = 53.7 bits (127), Expect = 2e-05, Method: Composition-based stats. Identities = 51/277 (18%), Positives = 78/277 (28%), Gaps = 44/277 (15%) Query: 11 AHYLYRYDRHGRLTEKTDLIP---------EGVIRTD--DERTHRYHYDSQHRLVHYTRT 59 Y Y+ G+L TD +RTD D + + YD RL T Sbjct: 1208 QQTRYTYNDEGKLESITDAAGHTTHYHYQNSKPLRTDYPDGSSEHFSYDHAGRLSVLTDA 1267 Query: 60 QYAEP-----------------LVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQV 102 + +Y YD +GR + + R + Sbjct: 1268 EGNRTAYDYDNDSKPTIRYNALGGAFQYRYDSVGRLKTLVNENGDSYAFEYDERDRLIRE 1327 Query: 103 TWYGWDGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGE 162 T + R T + Y G+ I V T R + Q+ Sbjct: 1328 TGFDGKMTRYTYNPAGELIREEEYASGN----IDVRTRPLRTITYHRDRIGRIRQKDSHL 1383 Query: 163 DGGSVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTP----- 217 DGG ++ D+L I A E R GL EQ+ + +P+ + Sbjct: 1384 DGGEIL---STHYRYDKLNRLIQAHNAHSELRFGYDHNGLIKEQLIHLDEPITSSTSRSQ 1440 Query: 218 ----ARKIHLYHCDHRGLPLALVSTEGATEWCAEYDE 250 A +I + D G + G Y Sbjct: 1441 SKDVAAQITEHRYDVLGNRTQTILPTGEVLNRLYYGS 1477 Score = 50.6 bits (119), Expect = 1e-04, Method: Composition-based stats. Identities = 71/381 (18%), Positives = 99/381 (25%), Gaps = 96/381 (25%) Query: 14 LYRYDRHGRLTEKTDLIPEGVIRTDDER------------THRYHYD---SQHRLVHYTR 58 YRYD +G L D R R Y YD Q R++ Sbjct: 979 RYRYDDNGDLVAVEDAEGFVHRRFGYRRHMMIRHQTTAGLNTYYQYDHYNPQGRVLRSYT 1038 Query: 59 TQYAEPLVESRYLY--------DPLGR-----------RVAKRVWRRERDLTGWMSLSR- 98 E R+ Y D LGR V K LT +L R Sbjct: 1039 DNGE----EWRFAYADGHTQITDALGRSEHLYYDHHGEVVKKVFADGSSILTERDALGRP 1094 Query: 99 ------KPQVTWYGWDG-DRLTTIQNDRTRIQTIYQPGSFTP------------------ 133 + T Y ++ LT + + + Q I P Sbjct: 1095 IKITDEMGRETRYRYNECGLLTFVGGEGGQNQHIRYDQERRPVEITLPHNQKTLIEYNEQ 1154 Query: 134 -LIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRL-----ESEILAD 187 L ++ + R + + Q + F L L + Sbjct: 1155 GLPATQSDSKGNTTRYRYNENGQITQITDAKNNTYTFEYDLHHRLSTQTDCSGQQTRYTY 1214 Query: 188 RVSEESRRWLASCGLTVEQMQNQMDPVYT--PARKIHLYHCDHRGLPLALVSTEGATEWC 245 + + G T P+ T P + DH G L EG Sbjct: 1215 NDEGKLESITDAAGHTTHYHYQNSKPLRTDYPDGSSEHFSYDHAGRLSVLTDAEGNRTA- 1273 Query: 246 AEYDEWGNLLNEENPHQLQQLIRLPGQQ-YDE---------ESGLYYNRHRYYDPLQGRY 295 +YD N+ P + Q YD E+G Y YD + R Sbjct: 1274 YDYD------NDSKPTIRYNALGGAFQYRYDSVGRLKTLVNENGDSYAF--EYD-ERDRL 1324 Query: 296 ITQDPIGLKGGWNFYQYPLNP 316 I + G G Y Y NP Sbjct: 1325 IRE--TGFDGKMTRYTY--NP 1341 >UniRef50_A5GE16 YD repeat protein n=1 Tax=Geobacter uraniireducens Rf4 RepID=A5GE16_GEOUR Length = 1600 Score = 205 bits (520), Expect = 4e-51, Method: Composition-based stats. Identities = 87/391 (22%), Positives = 137/391 (35%), Gaps = 70/391 (17%) Query: 4 DNRIAR----DAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRT 59 NR+ + Y YD GR T + ++ T Y YD RL + T Sbjct: 1149 GNRLTDIIAPAGTFTYGYDALGRRTS---------LGYPNQVTAAYTYDDAGRLTSLSHT 1199 Query: 60 QYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWM-----SLSRKPQVTWYGWDGDR--- 111 + Y D +G R +K E L + + S KP+ Y G+R Sbjct: 1200 AGGSTIAAFSYALDNVGNRTSKATTEAENYLYDVVYRLLNAASPKPETFTYDAVGNRQTG 1259 Query: 112 ---------------------LTTIQNDRTRIQTIYQPGSFTP-----------LIRVET 139 L ++ PG+F L++VE Sbjct: 1260 PGAKDTGYLHNAGNQMTQGRKLAYGYDNNGNQTNRAVPGAFDKSWTQTWDNENRLVKVEK 1319 Query: 140 ATGELAKTQRRS-----LADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSEESR 194 G +T S Q + +DG + V D + E+ D ++ Sbjct: 1320 VKGAEKRTVSFSYDPFGRRIVKQMTVVKDGVTKTSSSSYVYDNDNIALEVYTDETGAVTK 1379 Query: 195 RWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNL 254 + E + + + + YH D G +++ EYD +G + Sbjct: 1380 TFYTHGAGIDEHLALE------HGGQFYYYHADGLGSIVSITDANRNVVQSYEYDSFGMV 1433 Query: 255 LNEENPHQLQQLIRLPGQQYDEESGLYYNRHRYYDPLQGRYITQDPIGLKGGWNFYQYP- 313 G+++D+E+GLY+ R RYYDP++GR+I++DP+G KGG N Y Y Sbjct: 1434 KPST---VFANSYTYTGREWDKETGLYFYRARYYDPMEGRFISKDPVGFKGGINIYAYVS 1490 Query: 314 LNPVQYIDSMGLASKYGHLNNGGYGARPNKP 344 N V D GL G N + P+ P Sbjct: 1491 NNVVNDTDPSGLYP--GPCGNDSHQWVPDSP 1519 Score = 65.6 bits (158), Expect = 4e-09, Method: Composition-based stats. Identities = 48/252 (19%), Positives = 84/252 (33%), Gaps = 35/252 (13%) Query: 3 PDNRIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYA 62 N++ + Y YD +G T + +++ +D+++RLV + + A Sbjct: 1271 AGNQMTQGRKLAYGYDNNGNQTNRAVPGAF-------DKSWTQTWDNENRLVKVEKVKGA 1323 Query: 63 EPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLT-TIQNDRTR 121 E + YDP GRR+ K++ + +T S S Y +D D + + D T Sbjct: 1324 E-KRTVSFSYDPFGRRIVKQMTVVKDGVTKTSSSS-------YVYDNDNIALEVYTDETG 1375 Query: 122 IQTIYQPGSFTPLIRVETATGELAKTQ-RRSLADTLQQ--SGGEDGGSVVFPPVLVQMLD 178 T +T ++ Q AD L S + +VV Sbjct: 1376 AVTKTF---YTHGAGIDEHLALEHGGQFYYYHADGLGSIVSITDANRNVVQSYEYDSFGM 1432 Query: 179 RLESEILADRVSEESRRWLASCGLTVEQMQN---------QMDPVYTPAR-KIHLYHCDH 228 S + A+ + R W GL + + DPV I+ Y + Sbjct: 1433 VKPSTVFANSYTYTGREWDKETGLYFYRARYYDPMEGRFISKDPVGFKGGINIYAYVSN- 1491 Query: 229 RGLPLALVSTEG 240 + G Sbjct: 1492 --NVVNDTDPSG 1501 Score = 61.4 bits (147), Expect = 7e-08, Method: Composition-based stats. Identities = 48/301 (15%), Positives = 77/301 (25%), Gaps = 55/301 (18%) Query: 11 AHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYH-----------YDSQHRLVHYTRT 59 Y YD + +T TD + T + R YD+ L+ T Sbjct: 793 GTTTYSYDANDYMTSLTDPLSNTTSYTYNSRGQVLTVSGPAGTTTNTYDANGNLLTVTDP 852 Query: 60 QYAEPLVESRYLYDPLGRRV----AKRV------------------------WRRERDLT 91 A + Y YDP G AK + + + + Sbjct: 853 ARA----TTTYEYDPKGNVTKITDAKGKATTFVYDASGMLTSTTDQTGATTTYTHDANGS 908 Query: 92 GWMSLSRKPQVTWYGWDG-DRLTTIQND-RTRIQTIYQP-GSFTPLIRVETATGELAKTQ 148 S +VT + +DG +RL T+ + Y G+ T + T Sbjct: 909 MATSTDTTGKVTTFTYDGMNRLATVTDPLGHVTTYDYDKIGNRTSVTDANGNTTTYKYNY 968 Query: 149 RRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQ 208 R + + G + + L D + + G + Sbjct: 969 RGQVIEAKDAQGSTTTYTYGATGCTSCGGGVDKLTALTDAKGQTTSWQYDLLGHLASETD 1028 Query: 209 NQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIR 268 P +K+ Y D G GA YD L + P Sbjct: 1029 --------PLQKVTAYMYDPAGRMNLKTDANGAAVA-YGYDPLRRLTGKTYPDGSSLSYT 1079 Query: 269 L 269 Sbjct: 1080 Y 1080 Score = 59.8 bits (143), Expect = 2e-07, Method: Composition-based stats. Identities = 44/298 (14%), Positives = 71/298 (23%), Gaps = 47/298 (15%) Query: 9 RDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEP---- 64 + Y YD G L K D Y YD HR++ T + Sbjct: 679 DSGQWSYTYDPAGFLLTKAD---------PGGNVVTYVYDDTHRVISGTDPEGRSRDLDY 729 Query: 65 -------------------LVESRYLYD-PLGRRVAKRVWRRERDLTGWMS-------LS 97 E +Y YD G +K + S Sbjct: 730 AASVPGSDTAKTTTFKEKDGGEWQYTYDTSAGTLTSKTDPLGNTTSFTYDSRKKMLTKTE 789 Query: 98 RKPQVTWYGWDGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQ 157 T Y +D + T D T Y S ++ V G T + Sbjct: 790 PVIGTTTYSYDANDYMTSLTDPLSNTTSYTYNSRGQVLTVSGPAGTTTNTYDANGNLLTV 849 Query: 158 QSGGEDGGSVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTP 217 + + P V + S ++ T D + Sbjct: 850 TDPARATTTYEYDPKGNVTKITDAKGKATTFVYDASGMLTSTTDQTGATTTYTHDANGSM 909 Query: 218 A------RKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRL 269 A K+ + D + G +YD+ GN + + + + Sbjct: 910 ATSTDTTGKVTTFTYDGMNRLATVTDPLGHVT-TYDYDKIGNRTSVTDANGNTTTYKY 966 Score = 52.1 bits (123), Expect = 4e-05, Method: Composition-based stats. Identities = 46/253 (18%), Positives = 70/253 (27%), Gaps = 34/253 (13%) Query: 13 YLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYLY 72 Y + YD G L T+ D Y YD L+ T+ Y+Y Sbjct: 663 YTFGYDG-GNLITVTN---------PDSGQWSYTYDPAGFLL----TKADPGGNVVTYVY 708 Query: 73 DPLGRRVAKRVWR---RERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQPG 129 D R ++ R+ D + S + T + + D Q Y Sbjct: 709 DDTHRVISGTDPEGRSRDLDYAASVPGSDTAKTTTF---------KEKDGGEWQYTYDTS 759 Query: 130 SFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRV 189 + T L G S L ++ G + M + Sbjct: 760 AGT-LTSKTDPLGNTTSFTYDSRKKMLTKTEPVIGTTTYSYDANDYMTSLTDPLSNTTSY 818 Query: 190 SEESRRWLASCGLTVEQMQNQMD------PVYTPARKIHLYHCDHRGLPLALVSTEGATE 243 + SR + + N D V PAR Y D +G + +G Sbjct: 819 TYNSRGQVLTVSGPAGTTTNTYDANGNLLTVTDPARATTTYEYDPKGNVTKITDAKGKAT 878 Query: 244 WCAEYDEWGNLLN 256 YD G L + Sbjct: 879 -TFVYDASGMLTS 890 Score = 49.4 bits (116), Expect = 3e-04, Method: Composition-based stats. Identities = 44/309 (14%), Positives = 74/309 (23%), Gaps = 70/309 (22%) Query: 5 NRIARDAH-----YLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYH------------- 46 NR+A Y YD+ G T TD + R Sbjct: 928 NRLATVTDPLGHVTTYDYDKIGNRTSVTDANGNTTTYKYNYRGQVIEAKDAQGSTTTYTY 987 Query: 47 ------------------YDSQHRLVHYTRTQYAEPLVES-------RYLYDPLGRRVAK 81 D++ + + E+ Y+YDP GR K Sbjct: 988 GATGCTSCGGGVDKLTALTDAKGQTTSWQYDLLGHLASETDPLQKVTAYMYDPAGRMNLK 1047 Query: 82 RVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETAT 141 G+ L R T+ D + + Y A Sbjct: 1048 TDANGAAVAYGYDPLRRLTGKTY------------PDGSSLSYTYDTAGHVQTA----AN 1091 Query: 142 GELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSEESRRWLASCG 201 + A G ++ + L + +R + + E + G Sbjct: 1092 SNVTYIYAYDAAGRATSVTDSRGYTLAYEYDL--LGNRTKMKFQPGTADERITTYAYDDG 1149 Query: 202 LTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPH 261 N++ + PA Y D G +L YD+ G L + + Sbjct: 1150 -------NRLTDIIAPAGTFT-YGYDALGRRTSLGYPN-QVTAAYTYDDAGRLTSLSHTA 1200 Query: 262 QLQQLIRLP 270 + Sbjct: 1201 GGSTIAAFS 1209 >UniRef50_A6GLW0 Rhs family protein n=1 Tax=Limnobacter sp. MED105 RepID=A6GLW0_9BURK Length = 1598 Score = 204 bits (518), Expect = 7e-51, Method: Composition-based stats. Identities = 85/349 (24%), Positives = 146/349 (41%), Gaps = 49/349 (14%) Query: 17 YDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVH---------------YTRTQY 61 YD GRL + + + + RY Y+ +++LV R + Sbjct: 1127 YDPQGRLVGQVNRREKSSELSPTVSRRRYCYNQRNQLVRIDDQGHGTSLYHYDLLDRLRV 1186 Query: 62 AEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSL-------SRKPQVT----------- 103 E +L+DP + V + D +L +R+PQ T Sbjct: 1187 VEGPAPEAFLFDPASNLLEALVGQEATDAQVNKALPEPSSPNARRPQQTPGNRLKRQGNR 1246 Query: 104 WYGWD--GDRLTT--IQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQS 159 + +D G+R+ + R T Y + L+ V G + + +L + +S Sbjct: 1247 RFNYDERGNRIEEIIERGARQGQVTRYSHNAQNQLVEVN-VAGVVTRYTYDALGRRISKS 1305 Query: 160 GGEDGGSVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPAR 219 + G+ +F +L + S ++ + SR +L + Sbjct: 1306 S--EHGNTIFYWNGDVLLGEINSGFDHEQ-NRPSRTYLFEPFSFKPLALVE-------NG 1355 Query: 220 KIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEESG 279 ++ YH DH G P + + W + + +G L+ + ++++ +R GQ +D E+G Sbjct: 1356 EVFHYHTDHIGTPREITNASAEVVWSSTFKTYGALVL-AHVNEVENPLRFQGQYFDSETG 1414 Query: 280 LYYNRHRYYDPLQGRYITQDPIGLKGGWNFYQYPLNPVQYIDSMGLASK 328 L+YNRHRYYDP G++ TQDPIGL GG N YQY NP+ ++D GL+ K Sbjct: 1415 LHYNRHRYYDPNCGQFTTQDPIGLLGGMNTYQYAPNPMTWVDPWGLSCK 1463 Score = 87.9 bits (216), Expect = 8e-16, Method: Composition-based stats. Identities = 42/187 (22%), Positives = 65/187 (34%), Gaps = 32/187 (17%) Query: 3 PDNRIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYA 62 P NR+ R + + YD G E+ + RY +++Q++LV Sbjct: 1236 PGNRLKRQGNRRFNYDERGNRIEEIIERGAR-----QGQVTRYSHNAQNQLVEVNV---- 1286 Query: 63 EPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQN----- 117 V +RY YD LGRR++K T + W+GD L N Sbjct: 1287 -AGVVTRYTYDALGRRISKSSEHGN---------------TIFYWNGDVLLGEINSGFDH 1330 Query: 118 --DRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQ 175 +R +++P SF PL VE T + + E S F Sbjct: 1331 EQNRPSRTYLFEPFSFKPLALVENGEVFHYHTDHIGTPREITNASAEVVWSSTFKTYGAL 1390 Query: 176 MLDRLES 182 +L + Sbjct: 1391 VLAHVNE 1397 Score = 54.4 bits (129), Expect = 9e-06, Method: Composition-based stats. Identities = 47/274 (17%), Positives = 80/274 (29%), Gaps = 36/274 (13%) Query: 11 AHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRY 70 Y++D GRL T+ + R+ Y YD R T + + + Y Sbjct: 838 QGNTYQFDAWGRLASVTNPL---------GRSAYYAYDLMGRCTRATNHEG----LSTEY 884 Query: 71 LYDPLGR--RVAKRVWRRERDLTGWMSLSRKPQVT------WYGWDGDRLTTIQNDRTRI 122 Y PLG+ R+ R ++ Y +D +R + Sbjct: 885 AYSPLGQLERITDPTGRSTVYEYADKLSQPTARIDAQGFTLRYRYDTERNLIELLNENSQ 944 Query: 123 QTIYQPGSFTPLIRVETATGELAKTQRRSLADTL--QQSGGEDGGSVVFPPVLVQMLDRL 180 ++ L++ G + Q + Q+ G +V+ L RL Sbjct: 945 SCRFEYDLAEHLVKESGFDGRVQTYQYNLAGHLVEKQEWGVCGQAPLVYTRYTRDALGRL 1004 Query: 181 ESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEG 240 +D E + + Q N V + D G LA + +G Sbjct: 1005 LQTRHSDG---EEATFAYCPQGPLIQANNSNRSVQ--------WEVDAEGRVLAEL--QG 1051 Query: 241 ATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQY 274 +Y+ G L + G QY Sbjct: 1052 QHRVEHQYNPAGWLKQSSWGSMGGLPSGVLGYQY 1085 Score = 50.6 bits (119), Expect = 1e-04, Method: Composition-based stats. Identities = 40/289 (13%), Positives = 76/289 (26%), Gaps = 30/289 (10%) Query: 14 LYRYDRHGRLTEKTDLIPEGVIRTDDERTH------------RYHYDSQHRLVHYTRTQY 61 YRY+ G+L TD + + R + ++ TR Sbjct: 605 QYRYNPQGQLVAATDAAGFEELYAYNARNVLVRRTLKSGYNIHFEWEQVGEQSRCTRQWG 664 Query: 62 ----AEPLVESRYLYD----PLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLT 113 +P R+ +D + R A+ ++ + + VT ++ + Sbjct: 665 DPIEGKPTYHYRFEWDDKHVAIDSRGARTEYQFNAQGLPVLEKGPEGGVTRTRYNANGQV 724 Query: 114 TIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVL 173 D +Q S L+ +L + + + L+ Sbjct: 725 LECVDALGHSEKFQYNSQGHLVGYTNKLRQLHRFEVDAQGQVLKHINAAGHVRSNTYTSE 784 Query: 174 VQMLDRLESEILADRVSE-------ESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHC 226 + ++ R E L C + Q Q+ + + Y Sbjct: 785 GLLASHTDATGATTRYRYNNLGLLCEITNPLGQCTRMLYNAQGQVQAQINALGQGNTYQF 844 Query: 227 DHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRLP--GQQ 273 D G ++ + G YD G N L GQ Sbjct: 845 DAWGRLASVTNPLGR-SAYYAYDLMGRCTRATNHEGLSTEYAYSPLGQL 892 Score = 49.8 bits (117), Expect = 2e-04, Method: Composition-based stats. Identities = 62/420 (14%), Positives = 116/420 (27%), Gaps = 54/420 (12%) Query: 18 DRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESR----YLYD 73 D G + + T Y+ Q + + + VE R Y Y+ Sbjct: 550 DAFGNTLRIDYSEGKATHLYSSQTTWALGYNEQGLVSQIAQIGATQIGVEQRVLVQYRYN 609 Query: 74 PLGRRVAKRVWRRERDLTGWMSLSRKPQVT-------WYGWDGDRLTTIQNDRTRIQTIY 126 P G+ VA +L + + + + T + W+ + + Sbjct: 610 PQGQLVAATDAAGFEELYAYNARNVLVRRTLKSGYNIHFEWE-----QVGEQSRCTRQWG 664 Query: 127 QP--GSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEI 184 P G T R E +A R + + + G + + ++ Sbjct: 665 DPIEGKPTYHYRFEWDDKHVAIDSRGARTEYQFNAQGLPVLEKGPEGGVTRTRYNANGQV 724 Query: 185 LADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEW 244 L + L Q + R++H + D +G L ++ G Sbjct: 725 LECVDA------LGHSEKFQYNSQGHLVGYTNKLRQLHRFEVDAQGQVLKHINAAGHVR- 777 Query: 245 CAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEE--------SGLYYNRHRYYDPLQGRYI 296 Y G L + + R E + + YN QG+ Sbjct: 778 SNTYTSEGLLASHTDATGATTRYRYNNLGLLCEITNPLGQCTRMLYN-------AQGQ-- 828 Query: 297 TQDPIGLKGGWNFYQYPLNPVQY------IDSMGLASKYGHLNNGGYGARPNKP--PTPD 348 Q I G N YQ+ + + +G ++ Y + G N T Sbjct: 829 VQAQINALGQGNTYQFDA----WGRLASVTNPLGRSAYYAYDLMGRCTRATNHEGLSTEY 884 Query: 349 PSKLPDIAKQLRLPYPIDQASSAPNVFKTFFRALSPYDYTLYCRKWVKPNLTCTPQDDSQ 408 +++ P + + +TL R + NL ++SQ Sbjct: 885 AYSPLGQLERITDPTGRSTVYEYADKLSQPTARIDAQGFTLRYRYDTERNLIELLNENSQ 944 >UniRef50_B3PHE6 RHS Repeat family n=5 Tax=cellular organisms RepID=B3PHE6_CELJU Length = 3998 Score = 203 bits (517), Expect = 9e-51, Method: Composition-based stats. Identities = 90/372 (24%), Positives = 138/372 (37%), Gaps = 47/372 (12%) Query: 12 HYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYL 71 Y Y+ G++ KT+ +P+G T D Y YD+++RL R + Y Sbjct: 3575 GYDLEYNLTGQIVRKTEYLPDGSTATFD-----YTYDNRYRLTEVKR----NNEIVEAYG 3625 Query: 72 YDPLGRRVAKR-----VWRRERDLTGWMSLSRKPQVTWYGWD-----GDRLTTIQNDRTR 121 YD G R + + T L T Y +D G +L + Sbjct: 3626 YDANGNRTLHTSVDMGITNQSATYTQGDQLQSHGNTT-YLYDANGRLGSKLKATDDGLAL 3684 Query: 122 IQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLE 181 IY GS L++V+T + L + G +V V Q L + Sbjct: 3685 TTYIY--GSQGQLLQVDTPDKSI---------RYLHNALGNRVAKLVNGTVTEQYLWQDL 3733 Query: 182 SEILA--DRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTE 239 + +LA D +R+ + G T +T + + H DH G P + + Sbjct: 3734 TTLLAIYDGSGNLKQRFEYTLGHTPTS--------FTQNNQRYFIHTDHLGSPRIITDSN 3785 Query: 240 GATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEESGLYYNRHRYYDPLQGRYITQD 299 G YD +GN++ + NP Q G D+++GL +R YDP GR+ +D Sbjct: 3786 GNIVKTVSYDSYGNIIEDSNPE-FQIPFGFAGGLKDDDTGLIRFGYRDYDPETGRWTARD 3844 Query: 300 PIGLKGG-WNFYQYP-LNPVQYIDSMGL---ASKYGHLNNGGYGARPNKPPTPDPSKLPD 354 PIG +GG N Y Y + + +ID GL S + + YG D Sbjct: 3845 PIGFEGGDTNLYGYVLGDAINFIDIDGLQRNTSNSWNRHQQYYGGTGMTRSQLSQQYRAD 3904 Query: 355 IAKQLRLPYPID 366 KQ D Sbjct: 3905 QLKQWASGRNPD 3916 Score = 78.3 bits (191), Expect = 5e-13, Method: Composition-based stats. Identities = 49/272 (18%), Positives = 78/272 (28%), Gaps = 28/272 (10%) Query: 8 ARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVE 67 Y YD G L+E T D R Y YD R+ T Sbjct: 3323 TNTRAIHYAYDAFGNLSEITSA---------DGRKTHYEYDLLGRVTRITYPDGHSTQT- 3372 Query: 68 SRYLYDPLGRRV-------AKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQN--D 118 YD G A+ P+ T Y ++ DR T Sbjct: 3373 ---RYDANGNATKVIVPSFAEHDMTFNGVNLVETETRPAPETTQYSYNRDRQLTEIKLPS 3429 Query: 119 RTRIQTIYQPGSFTPLIRVETATGELA-KTQRRSLADTLQQSGGEDGGSVVFPPVLVQML 177 + IYQ G L R++T G+ + Q+ +QQ + S + Q Sbjct: 3430 GETLHYIYQEG---RLARLQTPEGDTHYRYQQGDQLHEIQQGSEKVNYSYDGTLLTQQTY 3486 Query: 178 DRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVS 237 + + + + R S + D + T + H + GLP L Sbjct: 3487 QGQLNATINFGYNTDFRVNNLSYAGGNTTLSYDKDGLLTGIHGFTIEHHPNNGLPQRL-- 3544 Query: 238 TEGATEWCAEYDEWGNLLNEENPHQLQQLIRL 269 + G +++ +G + Q Sbjct: 3545 SRGQWNKNWQWNAYGETTSVNYRWGSQVNFGY 3576 Score = 52.1 bits (123), Expect = 4e-05, Method: Composition-based stats. Identities = 41/237 (17%), Positives = 76/237 (32%), Gaps = 17/237 (7%) Query: 4 DNRIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAE 63 +++ + Y YD +GRL K +G+ Y Y SQ +L+ + Sbjct: 3652 GDQLQSHGNTTYLYDANGRLGSKLKATDDGLA------LTTYIYGSQGQLLQVDTPDKS- 3704 Query: 64 PLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQ 123 RYL++ LG RVAK V + W L+ +DG + + T Sbjct: 3705 ----IRYLHNALGNRVAKLVNGTVTEQYLWQDLT----TLLAIYDGSGNLKQRFEYTLGH 3756 Query: 124 TIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESE 183 T + T + S + ++ + G+++ + + Sbjct: 3757 TPTSFTQNNQRYFIHTDHLGSPRIITDSNGNIVKTVSYDSYGNIIEDSNPEFQIPFGFAG 3816 Query: 184 ILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEG 240 L D + R+ DP+ +LY G + + +G Sbjct: 3817 GLKDDDTGLI-RFGYRDYDPETGRWTARDPIGFEGGDTNLYGY-VLGDAINFIDIDG 3871 Score = 50.2 bits (118), Expect = 2e-04, Method: Composition-based stats. Identities = 55/293 (18%), Positives = 84/293 (28%), Gaps = 44/293 (15%) Query: 9 RDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYA------ 62 +HY + Y G LTEK D E R HY++ RL + Sbjct: 3094 DGSHYRFNYQDGGLLTEKIDPRNERFTR---------HYNAIGRLSWSSDPMGGLWQLFD 3144 Query: 63 --EPLVESRYLY-DPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQND- 118 P SRY Y R + E + +++ D L+ + Sbjct: 3145 ERLPDNTSRYGYTTAENNRHQTTRQKLENGDIQTIQVTKTGGQHTQLTSADGLSETSSAY 3204 Query: 119 --RTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQM 176 T I + S P+ + T + T L T ++G D Sbjct: 3205 GMTTHIHYVLDEKSLRPVPNLVTVSTPSGLTNITHLTKTYAENGA-DTSRYTLVTENNSN 3263 Query: 177 LDRLESEILAD----RVSEESRRWLASCGLTVEQMQNQMDPVY----------------T 216 + + A +EE S T+ + Q+ ++ T Sbjct: 3264 TSTTQVDGRAGIHSFTSAEERSNTTYSDPQTLLTQRTQVSGLHDTHYEYDNRGRLTKTRT 3323 Query: 217 PARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRL 269 R IH Y D G + S +G EYD G + P R Sbjct: 3324 NTRAIH-YAYDAFGNLSEITSADGRKT-HYEYDLLGRVTRITYPDGHSTQTRY 3374 >UniRef50_UPI0001B52595 rhsE element core protein RshE n=1 Tax=Escherichia sp. 4_1_40B RepID=UPI0001B52595 Length = 273 Score = 203 bits (516), Expect = 1e-50, Method: Composition-based stats. Identities = 100/158 (63%), Positives = 116/158 (73%) Query: 202 LTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPH 261 +TVEQ+ Q++P YTPARK+H YHCDHRGLPLAL+S +G T W EYDEWGN LNEENPH Sbjct: 1 MTVEQLARQVEPEYTPARKVHFYHCDHRGLPLALISEDGNTAWRGEYDEWGNQLNEENPH 60 Query: 262 QLQQLIRLPGQQYDEESGLYYNRHRYYDPLQGRYITQDPIGLKGGWNFYQYPLNPVQYID 321 L Q RLPGQQ+DEESGLYYNRHR+YDPLQGRYIT DPIGL+GGWN YQYPLNP+Q ID Sbjct: 61 HLHQPYRLPGQQHDEESGLYYNRHRHYDPLQGRYITPDPIGLRGGWNMYQYPLNPIQVID 120 Query: 322 SMGLASKYGHLNNGGYGARPNKPPTPDPSKLPDIAKQL 359 MGL + + G A P + + + A Q Sbjct: 121 PMGLDAIENMTSGGLIYAVSGVPGLIAANSITNSAYQF 158 >UniRef50_C8QGI4 YD repeat protein n=1 Tax=Pantoea sp. At-9b RepID=C8QGI4_9ENTR Length = 465 Score = 202 bits (513), Expect = 3e-50, Method: Composition-based stats. Identities = 91/341 (26%), Positives = 127/341 (37%), Gaps = 89/341 (26%) Query: 4 DNRIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAE 63 DNR+ + + YD G L R Y YD+++RL+ R E Sbjct: 109 DNRLGQWQNLFMEYDGWGNLIR----------RRRGTEEQHYAYDAENRLIS-ARGTGPE 157 Query: 64 PLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTR-I 122 E+RY +D LGRR K V +R + T + W G RL Q + Sbjct: 158 GAFEARYHWDALGRRTRKIVT-----------TARGTEETRFLWQGWRLLQEQQENGACS 206 Query: 123 QTIYQPG-SFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLE 181 +Y P ++PL R++ Q + D L S +G + ++ Sbjct: 207 TYVYDPAEEWSPLARID-------HRQHEAQGDILWFSTDLNGAPLEVTDASGKL----- 254 Query: 182 SEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGA 241 RW G + ++ Q D VY A + L H Sbjct: 255 -------------RWSGQYG-SFGEVTRQTDGVYRRASQTSLSH---------------- 284 Query: 242 TEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEESGLYYNRHRYYDPLQGRYITQDPI 301 Q +R GQ D E+GL+YN RYYDP GR+ QDPI Sbjct: 285 -----------------------QPLRYAGQYADAETGLHYNLFRYYDPQTGRFTVQDPI 321 Query: 302 GLKGGWNFYQYPLNPVQYIDSMGLASKYGHLNNGGYGARPN 342 GL GGWN YQY NP+ +ID GL+ G +G P+ Sbjct: 322 GLAGGWNLYQYAPNPLTWIDPTGLSRYPGVDFSGSDALYPD 362 >UniRef50_C9Y441 Putative uncharacterized protein n=1 Tax=Cronobacter turicensis RepID=C9Y441_CROTZ Length = 1394 Score = 201 bits (510), Expect = 6e-50, Method: Composition-based stats. Identities = 88/348 (25%), Positives = 127/348 (36%), Gaps = 36/348 (10%) Query: 6 RIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPL 65 R YDR GRLT + + + R+ YD ++ L+ R P Sbjct: 911 RTQGLLTSRSEYDRLGRLTRRDVFTGDAQRPAPRRWSRRWDYDYRNNLIREERDD--NPF 968 Query: 66 VESRYLYDPLGRRVAK-----RVWRRERDLTGWMSLSRKPQVTWY---------GWDGD- 110 R+ YD GR + + + + D G Q + W D Sbjct: 969 SWYRWKYDSAGRLLTQDGTLPGQEQWQWDAAGNPLDDSATQTVRFNRVTQLNGIQWRYDI 1028 Query: 111 RLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQR----------RSLADTLQQSG 160 T++ D + + Y+ L V + + K Q R ++ T +Q Sbjct: 1029 HGRTVEKDNGQTRWRYRYDGEHRLTDVISQPRDRNKPQVEVSFRYDPLGRRISKTRRQFL 1088 Query: 161 GEDGGSVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARK 220 V RL EI E ++ S + E + T A Sbjct: 1089 AGQPTGKAVTTRFVWEGFRLLQEIH----DEVPLTYVYSDPHSYEPLARIDG---TQAPD 1141 Query: 221 IHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENP--HQLQQLIRLPGQQYDEES 278 I+ +H G P L EG W WG L +E P Q +R+ GQ D E+ Sbjct: 1142 IYWFHNQPNGTPERLTDVEGRVRWEGRNSAWGKLAHESTPLPTGYNQNLRMQGQYLDRET 1201 Query: 279 GLYYNRHRYYDPLQGRYITQDPIGLKGGWNFYQYPLNPVQYIDSMGLA 326 GL+YN RYYDP GR+ DPIGL GG N YQ+ N + ++D GL Sbjct: 1202 GLHYNLFRYYDPDCGRFTQHDPIGLAGGINLYQFAPNALGWVDPWGLN 1249 Score = 62.1 bits (149), Expect = 5e-08, Method: Composition-based stats. Identities = 44/290 (15%), Positives = 80/290 (27%), Gaps = 47/290 (16%) Query: 12 HYLYRYDRHGRLTEKTDLIPEGVIRT------------DDERTHRYHYDSQHRLVHYTRT 59 Y+ G++ TD D RYHYD+ R + R Sbjct: 611 SRHQEYNDAGQVIRATDCSGRVTRYRYHPLGWLSTAISADGEETRYHYDAAGRPIQLERP 670 Query: 60 QY-----------------AEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQV 102 + S + YD GR V+ + + K + Sbjct: 671 EGWEERLLWNARGLPEAHEGADGKRSEFTYDAAGRLVS--------------TSNPKGET 716 Query: 103 TWYGWDGD-RLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGG 161 WD RL ++N++ ++ G+ + L+ E+ G + + + T+ ++ Sbjct: 717 VRRRWDSRGRLIELENEKGEA-YQFRWGADSRLLEEESLDGVITRYGYDACGRTIARTFA 775 Query: 162 EDGGSVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKI 221 + +L S + + A + Sbjct: 776 AGHPEAITHTFAWSAAGQLLSRTTPEGQIRYDYTPAGLISRIALHASLAENVWSREAEQE 835 Query: 222 HLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRLPG 271 + D G + S GA W YD GN + + P G Sbjct: 836 LRFEYDALGRVIGEQSENGALGW--TYDALGNRTSVQLPDGRMLKNHFYG 883 Score = 56.3 bits (134), Expect = 2e-06, Method: Composition-based stats. Identities = 44/271 (16%), Positives = 77/271 (28%), Gaps = 35/271 (12%) Query: 8 ARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVE 67 YRYD G+LT TD T Y Y+ ++ + +E Sbjct: 393 KTWPLVTYRYDGRGQLTAVTDATGIT--------TREYRYNDAGLMIWHRLP----GGLE 440 Query: 68 SRYLYDPLG--RRVAKRVWRRERDLTGWMSLSRKPQVTWYG-------WDGDRLTTIQND 118 S Y ++ R V R + + + VT Y W+ L T D Sbjct: 441 SEYRWEKFDHWRVVENRTSTGDGCRIAYDLTAGLTTVTQYDGQTRQHYWNKQGLITRFVD 500 Query: 119 RTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLD 178 Y+ L R G + + +Q+ E Q L+ Sbjct: 501 ERGETWRYEWNEHDLLTRRIDPLGNATTFVYDDMGNRVQEVDAEG------NIRATQWLE 554 Query: 179 RLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVST 238 + R+ +E++ + + + L D G + V Sbjct: 555 HRALPAAITEADGTATRFYYDEHHGLERIVDAL-------GQTTLLRRDECGQIVEEVDA 607 Query: 239 EGATEWCAEYDEWGNLLNEENPHQLQQLIRL 269 G + EY++ G ++ + R Sbjct: 608 AGNSR-HQEYNDAGQVIRATDCSGRVTRYRY 637 >UniRef50_C0Q6Q9 Rhs-family protein n=27 Tax=Enterobacteriaceae RepID=C0Q6Q9_SALPC Length = 1593 Score = 201 bits (510), Expect = 6e-50, Method: Composition-based stats. Identities = 81/361 (22%), Positives = 130/361 (36%), Gaps = 28/361 (7%) Query: 2 WPDNRIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQY 61 W R+ YDR GRLT K + + Y Y Q L+ ++ Sbjct: 1108 WSQGRL----DTRRMYDRTGRLTRKLTCKGMRGVVPETFIDREYAYSGQDELLKKRHSRQ 1163 Query: 62 A----------------EPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTW- 104 + YD + +R + G + + Sbjct: 1164 GVTDYFYDMTGRITACRNEAYLDSWQYDAAANLLDRRQGETAQAGAGSVVPFNRITSYRG 1223 Query: 105 --YGWD--GDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSG 160 Y +D G + + T+ T + + +T + +++ Sbjct: 1224 LHYRYDEYGRVVEKWGRNGTQHYRWDAEHRLTEVAVIRGSTVRRYGYVYDAPGRRVEKHE 1283 Query: 161 GEDGGSVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARK 220 + G + RL E R S ++ S + E + A + Sbjct: 1284 LDAEGKPYNRTTFLWDGMRLAQECRLGRSSSL---YIYSDQGSHEPLARVDRAAPGEADE 1340 Query: 221 IHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEESGL 280 + YH D G P + G W A Y WGNL +E+ +QQ +R GQ D E+GL Sbjct: 1341 VLYYHTDVNGAPEEMTDGGGNIVWEAGYQVWGNLTHEKETRPVQQNLRFQGQYLDRETGL 1400 Query: 281 YYNRHRYYDPLQGRYITQDPIGLKGGWNFYQYPLNPVQYIDSMGLASKYGHLNNGGYGAR 340 +YN +R+YDP G++I+ DPI L+GG N Y Y NP+ +ID +GL ++ AR Sbjct: 1401 HYNLYRFYDPDIGKFISGDPISLRGGINLYAYAPNPISWIDPLGLRKSCSGFSSADDAAR 1460 Query: 341 P 341 Sbjct: 1461 S 1461 Score = 60.6 bits (145), Expect = 1e-07, Method: Composition-based stats. Identities = 55/265 (20%), Positives = 83/265 (31%), Gaps = 34/265 (12%) Query: 8 ARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVE 67 A Y YD +G LTE D RT RY D+ RLV YT Sbjct: 849 AESNSTRYSYDGNGHLTEVMFA---------DGRTERYQPDAAGRLVKYTSPAG----QI 895 Query: 68 SRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDG-DRLTTIQNDRTRIQTIY 126 +R+ D GR RR+ D TG + T Y +D RLTT+ N+ + Sbjct: 896 TRWQRDGQGRV------RRQTDATG--------RRTAYEYDAYGRLTTLTNENGES-YRF 940 Query: 127 QPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILA 186 + + G +L G + G + + RL ++I Sbjct: 941 RYDVLDRVTEQTDPGGSRRAYGYNALNAVTAVIYGGERGGEIRHGLERDAAGRLTAKITP 1000 Query: 187 DRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWCA 246 + +E + +E + + D ++ + D G L Sbjct: 1001 ETRTEYR---YDAADRLLEIRRRRHDAAEGGEPEVIRFSYDSAGN--LLSEETAQGVLQH 1055 Query: 247 EYDEWGNLLNEENPHQLQQLIRLPG 271 YD GN + P G Sbjct: 1056 RYDVQGNRTETQMPDGRTLRYLYYG 1080 Score = 56.3 bits (134), Expect = 3e-06, Method: Composition-based stats. Identities = 53/317 (16%), Positives = 93/317 (29%), Gaps = 67/317 (21%) Query: 11 AHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVES-- 68 A + Y YD G L +D + + Y YD ++V T + + ++ Sbjct: 768 AAWRYEYDERGNLQAVSDPL---------HQRTVYGYDRHGQVVRITDARGGDKYLQWNE 818 Query: 69 -----RYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQ 123 R+ D G ++ W + + T Y +DG+ T Sbjct: 819 DGQLMRHT-DCSG---SQTAWFYDERTRLERVTDAESNSTRYSYDGNGHLTEVMFADGRT 874 Query: 124 TIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESE 183 YQP + L++ + G++ + QR +Q+ G + L L +E Sbjct: 875 ERYQPDAAGRLVKYTSPAGQITRWQRDGQGRVRRQTDA-TGRRTAYEYDAYGRLTTLTNE 933 Query: 184 ILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALV------- 236 + ES R+ V + + P Y + A++ Sbjct: 934 ------NGESYRFRYDVLDRVTEQTD-------PGGSRRAYGYNALNAVTAVIYGGERGG 980 Query: 237 --------STEGATEWC--------AEYDEWGNLLN------EENPHQLQQLIRL----P 270 G YD LL + ++IR Sbjct: 981 EIRHGLERDAAGRLTAKITPETRTEYRYDAADRLLEIRRRRHDAAEGGEPEVIRFSYDSA 1040 Query: 271 GQQYDEESGLYYNRHRY 287 G EE+ +HRY Sbjct: 1041 GNLLSEETAQGVLQHRY 1057 Score = 54.4 bits (129), Expect = 8e-06, Method: Composition-based stats. Identities = 45/279 (16%), Positives = 76/279 (27%), Gaps = 31/279 (11%) Query: 6 RIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPL 65 +I + YRYD RL E + + R+ YDS L+ Q Sbjct: 997 KITPETRTEYRYDAADRLLEIRRRRHDAAEG-GEPEVIRFSYDSAGNLLSEETAQGV--- 1052 Query: 66 VESRYLYDPLGRRVAKR-----VWRRERDLTGWMSLSRKPQVTWYGWDGDRLT-TIQNDR 119 ++ YD G R + R +G + + + D L +Q + Sbjct: 1053 --LQHRYDVQGNRTETQMPDGRTLRYLYYGSGHLQQINLGRDVISEFTRDHLHREVQWSQ 1110 Query: 120 TRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLV-QMLD 178 R+ T L R T G + SG ++ V Sbjct: 1111 GRLDTRRMYDRTGRLTRKLTCKGMRGVVPETFIDREYAYSGQDELLKKRHSRQGVTDYFY 1170 Query: 179 RLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVST 238 + I A R W + + + + S Sbjct: 1171 DMTGRITACRNEAYLDSWQYDAAANLLDRRQGETAQAGAGSVVPF---------NRITSY 1221 Query: 239 EGATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEE 277 G YDE+G ++ + + Q ++D E Sbjct: 1222 RGL---HYRYDEYGRVVEKWGRNGTQH------YRWDAE 1251 Score = 53.3 bits (126), Expect = 2e-05, Method: Composition-based stats. Identities = 57/290 (19%), Positives = 79/290 (27%), Gaps = 47/290 (16%) Query: 5 NRIARDAHY-----LYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRT 59 R+ YD HGRL E + IR Y + + V Sbjct: 528 RRLKMLGDRNSNCQHLTYDNHGRLVEISGDRQRPCIRL------HYELAAHPQRVTRIFR 581 Query: 60 QY--AEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQN 117 Y EP + RY YD GR D G + +D + T+ Sbjct: 582 HYPEGEPELLRRYRYDEAGR------LNGVVDNAGQYQ-------REFAYDDNDCMTMHR 628 Query: 118 DRTRIQTIYQ----PGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVL 173 + + Y G RV + + R L L + S+ Sbjct: 629 EPGGERYYYSWAWFEGPDDAAWRVTGHHTDSGEQYR--LDWNLAERSLCVTDSLGRMRCH 686 Query: 174 VQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDP-VYTPARKIHLYHC-DHRGL 231 L + + + RW L + Q Y R HL D G Sbjct: 687 WWDAQGLVTAYRDEAGQMTTFRWSDEERLLLGMTDAQGGKWRYVYDRLGHLTETHDPLGR 746 Query: 232 ------------PLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRL 269 P V GA W EYDE GNL +P + + Sbjct: 747 VEQTQWHPVWHQPETEVDAAGA-AWRYEYDERGNLQAVSDPLHQRTVYGY 795 Score = 49.4 bits (116), Expect = 3e-04, Method: Composition-based stats. Identities = 51/365 (13%), Positives = 77/365 (21%), Gaps = 122/365 (33%) Query: 13 YLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYLY 72 YRYD GRL GV+ + + YD + + RY Y Sbjct: 592 RRYRYDEAGRL--------NGVVDNAGQYQREFAYDDNDCMTMHREPGG------ERYYY 637 Query: 73 ---------DPLGRRVAKRVWRRERDLTGWMSLSR------------------------- 98 D R E+ W R Sbjct: 638 SWAWFEGPDDAAWRVTGHHTDSGEQYRLDWNLAERSLCVTDSLGRMRCHWWDAQGLVTAY 697 Query: 99 ---KPQVTWYGW-DGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLAD 154 Q+T + W D +RL D + Y L G + +TQ + Sbjct: 698 RDEAGQMTTFRWSDEERLLLGMTDAQGGKWRYVYDRLGHLTETHDPLGRVEQTQWHPVWH 757 Query: 155 TLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSEESRR------------------- 195 + G + + L + + V R Sbjct: 758 QPETEVDAAGAAWRYEYDERGNLQAVSDPLHQRTVYGYDRHGQVVRITDARGGDKYLQWN 817 Query: 196 -----------------WLASCGLTVEQMQNQMD--------------PVYTPARKIHLY 224 W +E++ + V + Y Sbjct: 818 EDGQLMRHTDCSGSQTAWFYDERTRLERVTDAESNSTRYSYDGNGHLTEVMFADGRTERY 877 Query: 225 HCDHRGLPLALVSTEGAT-EWC-------------------AEYDEWGNLLNEENPHQLQ 264 D G + S G W EYD +G L N + Sbjct: 878 QPDAAGRLVKYTSPAGQITRWQRDGQGRVRRQTDATGRRTAYEYDAYGRLTTLTNENGES 937 Query: 265 QLIRL 269 R Sbjct: 938 YRFRY 942 >UniRef50_C6CNW6 YD repeat protein n=8 Tax=Enterobacteriaceae RepID=C6CNW6_DICZE Length = 1679 Score = 200 bits (509), Expect = 7e-50, Method: Composition-based stats. Identities = 87/336 (25%), Positives = 127/336 (37%), Gaps = 56/336 (16%) Query: 8 ARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDE---RTHRYHYDSQHRLVHYTRTQYAEP 64 R L+ YD L E + + P+G R YD+ R+V Sbjct: 1270 RRQQARLFGYDSEQNLCEVSAIEPDGAGRLSASNAVVQASSGYDTAGRVVM--------- 1320 Query: 65 LVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDG-DRLTTIQNDRTRIQ 123 +SRY YD GR V+KR R +P+ T +GWD DRL + + Sbjct: 1321 RGDSRYQYDACGRLVSKRESRA----------GFRPRDTQFGWDAQDRLVRVSLPDGS-R 1369 Query: 124 TIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESE 183 Y +F R S Q + V + Q+ +++ Sbjct: 1370 WRYGYDAFGR---------------RVSKVREGQGPSAQAVARVAYRWDGDQLSG--QTQ 1412 Query: 184 ILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATE 243 AD + +W+ G Q + T ++H D G L S G Sbjct: 1413 YRADGSVARAVQWVYEPGSFRPLAQVEEKGGRT---QLHYIVTDLTGTARELCSETGEVH 1469 Query: 244 WCAEYDEWGNLLNEENP------------HQLQQLIRLPGQQYDEESGLYYNRHRYYDPL 291 W E WG E+ P ++ +R GQ YD E+GLYYNRHRYYDP Sbjct: 1470 WRGEQALWGAHREEKIPIPLRRWLGDAANEEVYCELRYQGQVYDSETGLYYNRHRYYDPE 1529 Query: 292 QGRYITQDPIGLKGGWNFYQYPLNPVQYIDSMGLAS 327 +Y++ DP+G+ GG Y NP++++D GL Sbjct: 1530 TAQYLSGDPLGIAGGLRPQGYVHNPMEWVDPFGLVG 1565 Score = 74.1 bits (180), Expect = 1e-11, Method: Composition-based stats. Identities = 53/285 (18%), Positives = 87/285 (30%), Gaps = 36/285 (12%) Query: 2 WPDNRIARDAHYLYRYDRHGRLTE--KTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRT 59 W DN++A ++ D G TE + D + D THRY YD +L+ Y Sbjct: 807 WVDNQLAAES------DPLGGRTEYQRNDWGQVTAVTLPDGATHRYEYDDDGQLLAYIDP 860 Query: 60 QYAEPLVESRYLYDPLGR---------RVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGD 110 + RY D GR R + + + L+G + Q Y G Sbjct: 861 LGS----AWRYTRDAAGRVDTASDPEGRTWQHRYSPQGLLSGVTGPDGRVQRYHYNRRG- 915 Query: 111 RLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFP 170 L + L A + + +R + + G E V++ Sbjct: 916 -LLERLEAEGTSPVTFFYDGHDRLTERHIAHEQGVQVRRW-----VYEGGRETPEKVIYE 969 Query: 171 PVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRG 230 L +R+ G + + DP+ R YH + Sbjct: 970 DGSETRFGYDGEGNLTSVTDALGQRYQFRYG-AFDNLLEATDPLGASVR----YHYNAES 1024 Query: 231 LPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRL--PGQQ 273 + +++G T W +D G L E + GQ Sbjct: 1025 EFAGVTNSQGQT-WQYRFDTAGRLSEERHYDGRVYRYDYDVAGQL 1068 Score = 62.5 bits (150), Expect = 3e-08, Method: Composition-based stats. Identities = 51/281 (18%), Positives = 81/281 (28%), Gaps = 36/281 (12%) Query: 11 AHYLYRYDRHGRLTEKTDLIPEGVIRTDD------------ERTHRYHYDSQHRLVHYTR 58 Y +RY L E TD + V + +T +Y +D+ RL Sbjct: 993 QRYQFRYGAFDNLLEATDPLGASVRYHYNAESEFAGVTNSQGQTWQYRFDTAGRLSEERH 1052 Query: 59 TQYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQND 118 RY YD G+ +++ R G+ + R + DG Sbjct: 1053 YDG----RVYRYDYDVAGQLASRQAPDGSRLAYGYDAGGRLRTIEAVSADG-------AG 1101 Query: 119 RTRIQTIYQPG-----SFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVL 173 Y + +P VE A + ++ ++G +DGG L Sbjct: 1102 EGTTTFAYDLSGRLLKAASPDAVVEYAYNRAGQVVSETVNGEEVRTGYDDGGQRSVVEGL 1161 Query: 174 VQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYH---CDHRG 230 + L + S LT + + + L H Sbjct: 1162 LASLSLGWQGGRLTTLGIGSH-----LPLTFSHTASGEEQRRSNGSGFALRHEWSAAGLL 1216 Query: 231 LPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRLPG 271 AL G E YD L + H +Q +RL G Sbjct: 1217 SRQALEGVSGVLERRYRYDVLDRLTGLSDSHWGEQALRLNG 1257 Score = 57.9 bits (138), Expect = 7e-07, Method: Composition-based stats. Identities = 43/278 (15%), Positives = 75/278 (26%), Gaps = 45/278 (16%) Query: 13 YLYRYDRHGRLTEKTDLIPEGVIRT------------DDERTHRYHYDSQHRLVHYTRTQ 60 + Y D GR+ +D D R RYHY+ + L+ + Sbjct: 865 WRYTRDAAGRVDTASDPEGRTWQHRYSPQGLLSGVTGPDGRVQRYHYNRRG-LLERLEAE 923 Query: 61 YAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQV-----------TWYGWDG 109 P+ + YD R + + + + T +G+DG Sbjct: 924 GTSPV---TFFYDGHDRLTERHIAHEQGVQVRRWVYEGGRETPEKVIYEDGSETRFGYDG 980 Query: 110 DRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVF 169 + T D + ++ G+F L+ G + + ++ F Sbjct: 981 EGNLTSVTDALGQRYQFRYGAFDNLLEATDPLGASVRYHYNAESE--------------F 1026 Query: 170 PPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHR 229 V + E R + + Q+ P Y D Sbjct: 1027 AGVTNSQGQTWQYRFDTAGRLSEERHYDGRVYRYDYDVAGQLASRQAPDGSRLAYGYDAG 1086 Query: 230 G---LPLALV-STEGATEWCAEYDEWGNLLNEENPHQL 263 G A+ G YD G LL +P + Sbjct: 1087 GRLRTIEAVSADGAGEGTTTFAYDLSGRLLKAASPDAV 1124 Score = 54.4 bits (129), Expect = 1e-05, Method: Composition-based stats. Identities = 52/265 (19%), Positives = 74/265 (27%), Gaps = 60/265 (22%) Query: 14 LYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYLYD 73 Y+YD G L +R + R Y Y Q L+ ++ A VE YD Sbjct: 698 RYQYDAQGYLL---------NVRAGEGRNFDYQYAPQGWLLRWS--DLAHTWVEHE--YD 744 Query: 74 PLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQPGSFTP 133 GR SR+ + W G+ Y +FT Sbjct: 745 EQGR-------------------SRRDRTADGFWPGE-------------FRYDDDAFT- 771 Query: 134 LIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSEES 193 + + G + T R + + DGG F V Q+ ES+ L R + Sbjct: 772 -SQYHSGFGGV-TTYVRDARNNILLRREPDGGEYRFEWVDNQL--AAESDPLGGRTEYQR 827 Query: 194 RRWLASCGLTVEQMQNQMDPVYTPARKIHL---------YHCDHRGLPLALVSTEGATEW 244 W +T+ + + Y D G EG T W Sbjct: 828 NDWGQVTAVTLPDGATHRYEYDDDGQLLAYIDPLGSAWRYTRDAAGRVDTASDPEGRT-W 886 Query: 245 CAEYDEWGNLLNEENPHQLQQLIRL 269 Y G L P Q Sbjct: 887 QHRYSPQGLLSGVTGPDGRVQRYHY 911 Score = 51.0 bits (120), Expect = 9e-05, Method: Composition-based stats. Identities = 59/290 (20%), Positives = 88/290 (30%), Gaps = 50/290 (17%) Query: 9 RDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVES 68 + Y YD GRL + +G E T + YD RL+ A P Sbjct: 1075 DGSRLAYGYDAGGRLRTIEAVSADGA----GEGTTTFAYDLSGRLLKA-----ASPDAVV 1125 Query: 69 RYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTW------YGWDGDRLTTIQNDRTRI 122 Y Y+ G+ V++ V E TG+ ++ V GW G RLTT+ Sbjct: 1126 EYAYNRAGQVVSETV-NGEEVRTGYDDGGQRSVVEGLLASLSLGWQGGRLTTLGIGS--- 1181 Query: 123 QTIYQPGSFTPLIRVETATGELAK----TQRRSLADTLQQSGGEDGGSVVFPPVLVQMLD 178 + P +F+ E S A L + E V+ +LD Sbjct: 1182 ---HLPLTFSHTASGEEQRRSNGSGFALRHEWSAAGLLSRQALEGVSGVLERRYRYDVLD 1238 Query: 179 RLESEILADRVSEESRRWLASCGLTVEQMQNQMD---------PVYTPARKIHLYHCDHR 229 RL L+D E L G V + + Q ++ D Sbjct: 1239 RLTG--LSDSHWGEQALRLNGTGQVVAERREQGRRQQARLFGYDSEQNLCEVSAIEPDGA 1296 Query: 230 GLPLAL---------VSTEGATE----WCAEYDEWGNLLNEENPHQLQQL 266 G A T G +YD G L+++ + Sbjct: 1297 GRLSASNAVVQASSGYDTAGRVVMRGDSRYQYDACGRLVSKRESRAGFRP 1346 >UniRef50_UPI0001BC4026 Rhs family protein n=6 Tax=Neisseria RepID=UPI0001BC4026 Length = 1477 Score = 200 bits (509), Expect = 8e-50, Method: Composition-based stats. Identities = 83/363 (22%), Positives = 129/363 (35%), Gaps = 47/363 (12%) Query: 6 RIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTH-----RYHYDSQHRLVHYTRTQ 60 R Y D GRL ++ + + TH Y YD L H T + Sbjct: 896 RTQGALTSRYELDTLGRLKKQIAQLTALTKTNKGKYTHAAVSRNYGYDRTGNLTHTTDQR 955 Query: 61 YAEPLVESRYLYDPLGRRVAKRVWRR-ERDLTGWMSLSRKPQV----------------- 102 + + Y+ LG R+AK D + ++ Sbjct: 956 SG----TTHFEYNKLG-RIAKADSELFAFDPAHNLLSTQTNNTSDSAATPLSDGLKAVSD 1010 Query: 103 --------TWYGWDG--DRLTTIQNDRTRIQTIYQ-------PGSFTPLIRVETATGELA 145 T + +DG + + D T Y +F E Sbjct: 1011 NRIREYNGTKFFYDGFGNTIHKEHLDGTTQNLYYDLFHQLVKTETFRHNPNTGGWEKETW 1070 Query: 146 KTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVE 205 ++ +++ + GS+ + RL E+ + S + Sbjct: 1071 VYDYDAMGRRIRKGSLKADGSLGEATEFIWSGSRLLQEVYDNGRYTYIYTDTDSY-EPLA 1129 Query: 206 QMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEEN-PHQLQ 264 Q+ N + + I+ +HCD G+P + +G W +YD WG L+ E N Sbjct: 1130 QIHNYTNEEGETHQDINYFHCDQIGIPREMTDEDGKLLWFGKYDVWGKLVKETNITGSAH 1189 Query: 265 QLIRLPGQQYDEESGLYYNRHRYYDPLQGRYITQDPIGLKGGWNFYQYPLNPVQYIDSMG 324 Q RL Q +D E+GL+YN RYYDP GR++ QDPIGL GG N Y + N + D +G Sbjct: 1190 QPFRLQNQYFDRETGLHYNFFRYYDPDIGRFVNQDPIGLDGGENLYGFAPNAAVWSDPLG 1249 Query: 325 LAS 327 L Sbjct: 1250 LEP 1252 Score = 87.2 bits (214), Expect = 1e-15, Method: Composition-based stats. Identities = 39/150 (26%), Positives = 53/150 (35%), Gaps = 24/150 (16%) Query: 4 DNRIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQ--- 60 DNRI + YD G K L D T +YD H+LV + Sbjct: 1010 DNRIREYNGTKFFYDGFGNTIHKEHL---------DGTTQNLYYDLFHQLVKTETFRHNP 1060 Query: 61 --YAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQND 118 Y YD +GRR+ K + + L + T + W G RL D Sbjct: 1061 NTGGWEKETWVYDYDAMGRRIRKGSLKADGSL---------GEATEFIWSGSRLLQEVYD 1111 Query: 119 RTRIQTIY-QPGSFTPLIRVETATGELAKT 147 R IY S+ PL ++ T E +T Sbjct: 1112 NGRYTYIYTDTDSYEPLAQIHNYTNEEGET 1141 Score = 52.5 bits (124), Expect = 3e-05, Method: Composition-based stats. Identities = 67/311 (21%), Positives = 98/311 (31%), Gaps = 52/311 (16%) Query: 5 NRIARDAHYLYRY-DRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAE 63 NR + + + Y D + TE TD++ RT +YHYD + L + Sbjct: 406 NRTSLGEEWRFTYHDGY---TEVTDVL---------GRTEQYHYDYNNELTKRVFADGSA 453 Query: 64 PLVESRYLYDPLGRRVAK-----RVWRRERDLTGWMSLSRKPQVTWYGWDGD---RLTTI 115 L+E D LGR ++ RV R + G + +P +D D RL Sbjct: 454 VLMER----DGLGRLLSHTDAMGRVTRYQYSNEGQVETIVRPDGAILHFDYDDCYRLIRK 509 Query: 116 QNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADT--LQQSGGEDGGSVVF---- 169 + R Y ++ + T T L T R AD L +G S + Sbjct: 510 SDAEGR----YDGYTYDEAGNLLTHTDPLKHTTRFEYADNGLLLSVTDPNGSSTAYHYNE 565 Query: 170 --PPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYT--PARKIHLYH 225 P L+ E+ + + +R A T + P + Sbjct: 566 NRQPDLITDCSGYETRLAYTPEGQLARITDALGQHTEYHYDADQNLTLALYPDGSKETFG 625 Query: 226 CDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEESGLY---- 281 D G EG T EY + G N G YD+ L Sbjct: 626 YDAAGRLKTHTDGEGHTT-SYEYGQDGLPTRRTNALGHTF-----GYHYDKARRLVGLTN 679 Query: 282 YNRHRY---YD 289 N RY YD Sbjct: 680 ENGARYRFAYD 690 Score = 52.1 bits (123), Expect = 5e-05, Method: Composition-based stats. Identities = 55/299 (18%), Positives = 92/299 (30%), Gaps = 60/299 (20%) Query: 14 LYRYDRHGRLTEKTDLIPEGVIRTDD------------ERTHRYHYDSQHRLVHYTRTQY 61 + YD GRL TD T YHYD RLV T Sbjct: 623 TFGYDAAGRLKTHTDGEGHTTSYEYGQDGLPTRRTNALGHTFGYHYDKARRLVGLTNENG 682 Query: 62 AEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYG--------------- 106 A R+ YD L R +A+ + + + + + + +G Sbjct: 683 A----RYRFAYDVLDRLIAESGFDHKLTGYRYNAGNELVEQREFGILNIPVDTNLSDGLN 738 Query: 107 -----------WDGD-RLTTIQ---NDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRS 151 DG RL I+ + + Y + L+R T+ G + + Sbjct: 739 DCTPLIVNDYIRDGSGRLKHIEVHSQNGSVQHRSYHYDTDGRLVRAATS-GHSSAFDYNA 797 Query: 152 LADTLQQSGGEDGGSVVFPPVLVQMLDRLESE---ILADRVSEESRRWLASCGLTVEQMQ 208 D + + + + LD E L DR ++ + + LT ++ Sbjct: 798 GGDLIGEYALRLPDAASCAAQGLPELDWQNPEHDMFLLDRSADIRYFYSSGGNLTTVELP 857 Query: 209 NQ--MDPVYTPARKIHLYHCD--------HRGLPLALVSTEGATEWCAEYDEWGNLLNE 257 + + +Y + +H D H L + T+GA E D G L + Sbjct: 858 DGQRIQNLYYGSGHLHSILFDGDTVTDIEHDKLHREISRTQGALTSRYELDTLGRLKKQ 916 Score = 45.6 bits (106), Expect = 0.004, Method: Composition-based stats. Identities = 47/299 (15%), Positives = 86/299 (28%), Gaps = 36/299 (12%) Query: 7 IARDAHYLYRYDRHGRLTEKTDLIPEGVIRT------------DDERTHRYHYDSQHRLV 54 + R A Y Y G LT + + D + +D HR Sbjct: 835 LDRSADIRYFYSSGGNLTTVELPDGQRIQNLYYGSGHLHSILFDGDTVTDIEHDKLHR-- 892 Query: 55 HYTRTQYAEPLVESRYLYDPLGRRVAKRVWRRER-DLTGWMSLSRKPQVTWYGWDGDRLT 113 +RTQ A + SRY D LG R+ K++ + T + YG+D Sbjct: 893 EISRTQGA---LTSRYELDTLG-RLKKQIAQLTALTKTNKGKYTHAAVSRNYGYDRTGNL 948 Query: 114 TIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVL 173 T D+ T ++ + + ++ A +L T + + + + + Sbjct: 949 THTTDQRSGTTHFEYNKLGRIAKADSEL--FAFDPAHNLLSTQTNNTSDSAATPLSDGLK 1006 Query: 174 VQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPL 233 +R+ + + L D + + H + G Sbjct: 1007 AVSDNRIREYNGTKFFYDGFGNTIHKEHLDGTTQNLYYDLFHQLVKTETFRHNPNTGGWE 1066 Query: 234 ALVSTEGATEWCAEYDEWGNLL-----NEENPHQLQQLIRLPGQQYDEESGLYYNRHRY 287 W +YD G + + G + +E Y+ RY Sbjct: 1067 KET-------WVYDYDAMGRRIRKGSLKADGSLGEATEFIWSGSRLLQE---VYDNGRY 1115 Score = 41.3 bits (95), Expect = 0.080, Method: Composition-based stats. Identities = 41/246 (16%), Positives = 74/246 (30%), Gaps = 18/246 (7%) Query: 14 LYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYLYD 73 Y D GRL G + + YHYD+ RLV + ++ S + Y+ Sbjct: 747 DYIRDGSGRLKHIEVHSQNGSV-----QHRSYHYDTDGRLVRAATSGHS-----SAFDYN 796 Query: 74 PLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQPGSFTP 133 G + + R + + P++ W + D ++ R Y S Sbjct: 797 AGGDLIGEYALRLPDAAS--CAAQGLPELDWQNPEHDMFLLDRSADIR----YFYSSGGN 850 Query: 134 LIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSEES 193 L VE G+ + D + + L + + R + + + + Sbjct: 851 LTTVELPDGQRIQNLYYGSGHLHSILFDGDTVTDIEHDKLHREISRTQGALTSRYELDTL 910 Query: 194 RRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGN 253 R + YT A Y D G T EY++ G Sbjct: 911 GRLKKQIAQLTALTKTN-KGKYTHAAVSRNYGYDRTGNLTHTTDQRSGTT-HFEYNKLGR 968 Query: 254 LLNEEN 259 + ++ Sbjct: 969 IAKADS 974 Score = 41.3 bits (95), Expect = 0.086, Method: Composition-based stats. Identities = 51/325 (15%), Positives = 88/325 (27%), Gaps = 68/325 (20%) Query: 11 AHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHY-----DSQHR----LVHYTRTQY 61 H Y YD GRL + Y D+ L Sbjct: 769 QHRSYHYDTDGRLVRAATSGHSSAFDYNAGGDLIGEYALRLPDAASCAAQGLPELDWQNP 828 Query: 62 AE------PLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTI 115 + RY Y G + +R + + +DGD +T I Sbjct: 829 EHDMFLLDRSADIRYFYSSGGNLTTVELPDGQRIQNLYYGSGHLHSI---LFDGDTVTDI 885 Query: 116 QND---------RTRIQTIYQPGSFTPLIRVETATGELAKTQ--RRSLADTLQQSGGEDG 164 ++D + + + Y+ + L + L KT + + A + G + Sbjct: 886 EHDKLHREISRTQGALTSRYELDTLGRLKKQIAQLTALTKTNKGKYTHAAVSRNYGYDRT 945 Query: 165 GSVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTV--EQMQNQMDPVYTPARKIH 222 G++ E L +S + + Q N D TP Sbjct: 946 GNLTHTTDQRSGTTHFEYNKLGRIAKADSELFAFDPAHNLLSTQTNNTSDSAATP----- 1000 Query: 223 LYHCDHRGLPLALVSTEGATEWCAE-----YDEWGNLLNEENPHQLQQLIRLPGQQYD-- 275 D A+ YD +GN +++E+ Q + YD Sbjct: 1001 --LSDGL---KAVSD---NRIREYNGTKFFYDGFGNTIHKEHLDGTTQNL-----YYDLF 1047 Query: 276 -----EESGLYYNRHRYYDPLQGRY 295 E+ R+ +P G + Sbjct: 1048 HQLVKTET------FRH-NPNTGGW 1065 >UniRef50_A7FDK7 YD/RHS repeat protein n=25 Tax=Enterobacteriaceae RepID=A7FDK7_YERP3 Length = 1527 Score = 200 bits (508), Expect = 1e-49, Method: Composition-based stats. Identities = 80/341 (23%), Positives = 125/341 (36%), Gaps = 50/341 (14%) Query: 8 ARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVH------------ 55 R Y+YDR+ ++ + ++ YD L Sbjct: 1078 GRWGKTQYQYDRNDQVVRADFGGFLPL-------QEQFSYDVNQNLREHRCLPRGAQAVL 1130 Query: 56 -----YTRTQYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWD-G 109 + +S Y YD GR V KR + +PQ+ Y W+ Sbjct: 1131 AQASQQQQAGRVVKRGDSEYRYDAGGRLVEKRSQKD----------GYRPQLWRYRWNEQ 1180 Query: 110 DRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVF 169 D+L+ + T + Y +F IR + + T + G + ++ Sbjct: 1181 DQLSELITP-TGARWRYGYDAFGRRIR-KLRVVDTPPLNEMDAPSTGPATASLAGYAYLW 1238 Query: 170 PPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHR 229 Q+++ + E+ WL + G + K+H DH Sbjct: 1239 SGD--QLIEEVPVYADGTVAYEQGIHWLYAPGGLTPMARYAQ-------GKLHYVVADHL 1289 Query: 230 GLPLALVSTEGATEWCAEYDEWGNL----LNEENPHQLQQLIRLPGQQYDEESGLYYNRH 285 G P L++ +G W + WG ++ +R GQ D ESGL+YNR Sbjct: 1290 GTPRELLNEQGKVVWASRLSTWGQAELWRQAANEEDRVSCNLRFAGQYADAESGLHYNRF 1349 Query: 286 RYYDPLQGRYITQDPIGLKGGWNFYQYPLNPVQYIDSMGLA 326 RYYD G+Y+ DPIGL GG N Y Y NPV+Y+D +GL Sbjct: 1350 RYYDGETGQYLCPDPIGLAGGLNPYGYVHNPVKYVDPLGLC 1390 Score = 90.6 bits (223), Expect = 1e-16, Method: Composition-based stats. Identities = 55/262 (20%), Positives = 75/262 (28%), Gaps = 27/262 (10%) Query: 5 NRIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEP 64 R+ + YRYD GRL EK + R + RY ++ Q +L A Sbjct: 1140 GRVVKRGDSEYRYDAGGRLVEK--RSQKDGYRP---QLWRYRWNEQDQLSELITPTGA-- 1192 Query: 65 LVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQV-----TWYGWDGDRLTTI---- 115 RY YD GRR+ K L + S P Y W GD+L Sbjct: 1193 --RWRYGYDAFGRRIRKLRVVDTPPLNEMDAPSTGPATASLAGYAYLWSGDQLIEEVPVY 1250 Query: 116 ----QNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPP 171 I +Y PG TP+ R T ++ E G V Sbjct: 1251 ADGTVAYEQGIHWLYAPGGLTPMAR---YAQGKLHYVVADHLGTPRELLNEQGKVVWASR 1307 Query: 172 VLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGL 231 + L + + A E + Y D GL Sbjct: 1308 LSTWGQAELWRQAANEEDRVSCNLRFAGQYADAESGLHYNRFRYYDGETGQYLCPDPIGL 1367 Query: 232 PLALVSTEGATEWCAEY-DEWG 252 L + G +Y D G Sbjct: 1368 AGGL-NPYGYVHNPVKYVDPLG 1388 Score = 57.1 bits (136), Expect = 1e-06, Method: Composition-based stats. Identities = 47/286 (16%), Positives = 80/286 (27%), Gaps = 45/286 (15%) Query: 12 HYLYRYDRHGRLTEKTDLIPEGVIRTDDER------------THRYHYDSQHRLVHYTRT 59 + Y+YDR G L + T + + ++ RYHYD L Sbjct: 673 SWQYQYDRQGLLRQVTYPSGQTMSFRYGKKGEVLRKIIAEDQVWRYHYDHHGCLSTIIDP 732 Query: 60 QYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQ------------VTWYGW 107 + V D LGR + + E P + Sbjct: 733 KGNSTAVTL----DVLGRLFSHQNALGELTRYTHSDAHASPAGSVTKMVMPDGVEQAIAY 788 Query: 108 DGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAK---------TQRRSLADTLQQ 158 D ++ D T Y+ G F L + G+ Q + + + Sbjct: 789 DSEKRIAALTDGAGKTTRYEYGGFDLLTGLIRPDGQRLTFGYDTLTRLNQVTNASGDTYR 848 Query: 159 SGGEDGGSVVFPPVLVQMLDRLESEILADRVSEESR-----RWLASC-GLTVEQMQNQMD 212 + G V+ + + + R+ RW S + Q D Sbjct: 849 YTRDRAGQVISETDFTGRTVHYQYDAVGRRIGARYPDQRLVRWHYSMQDQVLAQQTWHCD 908 Query: 213 PVYTPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEE 258 + + Y D G L+ + + +YDE G L+ E Sbjct: 909 ALSSTLVGTVSYGYDRAGRLLSATNADA--VVEFDYDEAGQLVAER 952 Score = 52.5 bits (124), Expect = 3e-05, Method: Composition-based stats. Identities = 44/294 (14%), Positives = 79/294 (26%), Gaps = 35/294 (11%) Query: 6 RIARDAHYLYRYDRHGRLTEK-------------TDLIPEGVIRTDDERTHRYHYDSQHR 52 R RYD GR+ D + R + YHY+ + Sbjct: 541 RDTDSTDVAVRYDISGRVVALKTSTGFFADHFIYHDKERYTIYRDGEGGETGYHYNENNL 600 Query: 53 LVHYTRTQYAEPLVESRYLY-----DPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGW 107 L+ L + D LG R+ + ++ DLT + Y Sbjct: 601 LIKLVDPLGNITLTDWDLTQKIKETDALG-RITRFIYNERGDLTAVIHPDETRTEYEYNP 659 Query: 108 DGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSV 167 G + Q Y L +V +G+ + + L++ ED Sbjct: 660 SGVVTAFTSSAGDSWQYQYDRQGL--LRQVTYPSGQTMSFRYGKKGEVLRKIIAED---- 713 Query: 168 VFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHL-YHC 226 + + + A + ++ + + + R H H Sbjct: 714 ------QVWRYHYDHHGCLSTIIDPKGNSTAVTLDVLGRLFSHQNALGELTRYTHSDAHA 767 Query: 227 DHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEESGL 280 G +V +G E YD + + G +D +GL Sbjct: 768 SPAGSVTKMVMPDG-VEQAIAYDSEKRIAALTDGAGKTTRYEYGG--FDLLTGL 818 Score = 48.3 bits (113), Expect = 6e-04, Method: Composition-based stats. Identities = 36/180 (20%), Positives = 63/180 (35%), Gaps = 23/180 (12%) Query: 5 NRIARDAHYLYRY--DRHGRLTEKTDLIPEGV------------IRTDDERTHRYHYDSQ 50 N++ + YRY DR G++ +TD V R D+R R+HY Q Sbjct: 837 NQVTNASGDTYRYTRDRAGQVISETDFTGRTVHYQYDAVGRRIGARYPDQRLVRWHYSMQ 896 Query: 51 HRLVHYTRTQ----YAEPLVESRYLYDPLGRRV----AKRVWRRERDLTGWMSLSR-KPQ 101 +++ + + Y YD GR + A V + D G + R + Sbjct: 897 DQVLAQQTWHCDALSSTLVGTVSYGYDRAGRLLSATNADAVVEFDYDEAGQLVAERLNGR 956 Query: 102 VTWYGWDGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGG 161 + WD T + + + G+ L R++ A + + Q L + Sbjct: 957 EVRHQWDALNGTPVARQVGELGLTFVYGAQGELTRLQLAGHQPLQLQHDRLGRETVRESA 1016 >UniRef50_A4SKJ3 Rhs family protein n=2 Tax=Bacteria RepID=A4SKJ3_AERS4 Length = 1590 Score = 200 bits (507), Expect = 1e-49, Method: Composition-based stats. Identities = 101/417 (24%), Positives = 148/417 (35%), Gaps = 70/417 (16%) Query: 6 RIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHR---YHYDSQHRLVHYTRTQYA 62 R L+ YD L E + ++P ++ YD+ R+ Q Sbjct: 1160 RGHERQARLFGYDSELNLCELSHILPSDGQPLSSQQAQAEPVRRYDTAGRVSQMGPNQ-- 1217 Query: 63 EPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDG-DRLTTIQN-DRT 120 Y YD GR K V R +PQ T + WDG DRL + D + Sbjct: 1218 -------YRYDKCGRLSDKVVSR----------PGFRPQTTQFEWDGFDRLQRVILPDGS 1260 Query: 121 RIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRL 180 R + Y P G+ + Q L DG +V Sbjct: 1261 RWRYRYDP--------FGRRIGKEREGQVSQLTAITSVHYRWDGDQLV-----------Q 1301 Query: 181 ESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEG 240 + AD + +W+ G Q + V ++H D G L S G Sbjct: 1302 QQSYRADGNTARQVQWVYEPGSFRPLAQWE---VGEQDERLHYIVTDVAGTARELCSEAG 1358 Query: 241 ATEWCAEYDEWGNLLNEENPHQLQQLI------------RLPGQQYDEESGLYYNRHRYY 288 W E WGN + P L++ + R GQ YD+E+GLYYNRHRY+ Sbjct: 1359 DIIWRGEQRLWGNYRADAIPQPLRRFLGDAANEETYCELRYQGQIYDQETGLYYNRHRYF 1418 Query: 289 DPLQGRYITQDPIGLKGGWNFYQYPLNPVQYIDSMGLASKYGHLNNGGYGARPNKPPTPD 348 DP G+YI+ DPIG GG Y NP++++D +GL + P+ Sbjct: 1419 DPELGQYISPDPIGFAGGVRPQGYVHNPLEWVDPLGLKGFFTRTV--------FHAPSGS 1470 Query: 349 PSKLPDIAKQLRLPYPIDQASSAPNVFKTFFRALSPYDYTLYCRKWVKPNLTCTPQD 405 + A L P++ S SP + + K+ + NL + QD Sbjct: 1471 THTVYQQAIDWDL--PVNTRSGVKTNLDIALDGGSP--FVVKNGKYSQVNLHHSKQD 1523 Score = 67.9 bits (164), Expect = 9e-10, Method: Composition-based stats. Identities = 58/298 (19%), Positives = 94/298 (31%), Gaps = 46/298 (15%) Query: 3 PDNRIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDER----THRYHYDSQHRLVHYTR 58 PDNR Y YD GRL +G + R + YD+ RL+ Sbjct: 999 PDNR-----ELHYHYDVLGRLARIEAWRAQGELNDPTARAKESETHFAYDAAARLL---- 1049 Query: 59 TQYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTW-YGWDGDRLTTIQN 117 Q + + +D LGR V +RV + + R+ GW L Q+ Sbjct: 1050 -QASNADAVVEFEWDALGRVVCERVNGETIESHYGEAGQREAGFALSQGWSSTGLLLSQS 1108 Query: 118 --------DRTRIQTIYQPGSFTPLIRVETA---------TGELAKTQRRSLADTLQQSG 160 T + YQ + L+ V + G RS +Q+ Sbjct: 1109 LVPASGAVPDTLSRH-YQYDALDRLVGVNDSHWGEQGWKLNGNGQVVAERSKRGHERQAR 1167 Query: 161 GEDGGSVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQ---------- 210 S + L +L + + + E R + G + NQ Sbjct: 1168 LFGYDSELNLCELSHILPSDGQPLSSQQAQAEPVRRYDTAGRVSQMGPNQYRYDKCGRLS 1227 Query: 211 MDPVYTPA--RKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQL 266 V P + + D ++ +G+ W YD +G + +E Q+ QL Sbjct: 1228 DKVVSRPGFRPQTTQFEWDGFDRLQRVILPDGS-RWRYRYDPFGRRIGKEREGQVSQL 1284 Score = 66.4 bits (160), Expect = 2e-09, Method: Composition-based stats. Identities = 56/314 (17%), Positives = 94/314 (29%), Gaps = 53/314 (16%) Query: 2 WPDNRIAR-----DAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHY 56 W +N++A + + G++T T D HRY YD RL+ Y Sbjct: 732 WVNNQLAALVNPLGQRTEFERNAWGQVTCVT---------LPDGSAHRYGYDDAGRLLAY 782 Query: 57 TRTQYAEPLVESRYLYDPLGRRVAK-----RVWRRERDLTGWMSLSRKPQVTWYGWDGDR 111 +Y Y+P G + WR E G ++ P W Sbjct: 783 IDPLGQP----WQYSYNPQGLVEGVTNPLGQCWRHEYTPQGLLAAVTDPVGQRSQWHY-- 836 Query: 112 LTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTL-----QQSGGEDGGS 166 + Y+P + P V L + L + Sbjct: 837 ------GEQGLPVRYEPANGAPWRFVYDQQDRLVARYQEGEQGALVRRWEYRHHARQPSK 890 Query: 167 VVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHC 226 V++ D L + G + +Q+ DP+ R YH Sbjct: 891 VIYEDGTESRFDYDIEGNLVRLTDALGHHHQLTYG-AFDNLQSVTDPLGATTR----YHY 945 Query: 227 DHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRL--PGQQYD----EESGL 280 + + +++G W E+D G + E + + R GQ + L Sbjct: 946 NAESEFAGVTNSQGH-HWRYEFDACGRVAAEVHYDGRRYDYRYDVAGQLVLRRAPDNREL 1004 Query: 281 YYNRHRYYDPLQGR 294 +Y +YD + GR Sbjct: 1005 HY----HYD-VLGR 1013 Score = 61.7 bits (148), Expect = 6e-08, Method: Composition-based stats. Identities = 63/325 (19%), Positives = 100/325 (30%), Gaps = 83/325 (25%) Query: 9 RDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVES 68 + H+ Y +D GR+ + D R + Y YD +LV E Sbjct: 958 QGHHWRYEFDACGRVAAEVHY---------DGRRYDYRYDVAGQLVLRRAPDN----REL 1004 Query: 69 RYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWD-GDRLTTIQNDRTRIQTIYQ 127 Y YD LGR WR + +L + +++ + T + +D RL N Sbjct: 1005 HYHYDVLGRLARIEAWRAQGELNDPTARAKESE-THFAYDAAARLLQASN---------- 1053 Query: 128 PGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILAD 187 AD + + + G VV V + ++ E Sbjct: 1054 -------------------------ADAVVEFEWDALGRVVCERVNGETIESHYGEAGQR 1088 Query: 188 RVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTE-GATEWCA 246 + +S GL + Q P Y D + + + G W Sbjct: 1089 EAGFALSQGWSSTGLLLSQSLVPASG-AVPDTLSRHYQYDALDRLVGVNDSHWGEQGWKL 1147 Query: 247 EYDEWGNLLNEENPHQLQQLIRLPGQQYDEESGLYYNRH-------------------RY 287 + G ++ E + ++ RL G YD E L H R Sbjct: 1148 NGN--GQVVAERSKRGHERQARLFG--YDSELNLCELSHILPSDGQPLSSQQAQAEPVRR 1203 Query: 288 YDPLQGRYITQDPIGLKGGWNFYQY 312 YD GR ++Q G N Y+Y Sbjct: 1204 YD-TAGR-VSQ------MGPNQYRY 1220 Score = 46.7 bits (109), Expect = 0.002, Method: Composition-based stats. Identities = 59/300 (19%), Positives = 86/300 (28%), Gaps = 75/300 (25%) Query: 14 LYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYLYD 73 Y YD G L +R R+ Y Y Q L + A+ VE YD Sbjct: 623 RYEYDDSGALLR---------VRAGAGRSFDYQYSPQGWLTRW--NDLAQTWVEH--DYD 669 Query: 74 PLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQPGSFTP 133 GR +A R + +D LT+ Y +F Sbjct: 670 SQGRCLANRCAGGYWK-------------DHFSYDDANLTS-----------YYHSAFGG 705 Query: 134 LIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSEES 193 + R + + DGG F V Q+ + L R E Sbjct: 706 VT-----------AYVRDERNNILLRREPDGGETRFEWVNNQLAALVNP--LGQRTEFER 752 Query: 194 RRWLASCGLTVEQMQNQMDPVYTPARKIHL---------YHCDHRGLPLALVSTEGATEW 244 W +T+ R + Y + +GL + + G W Sbjct: 753 NAWGQVTCVTLPDGSAHRYGYDDAGRLLAYIDPLGQPWQYSYNPQGLVEGVTNPLGQC-W 811 Query: 245 CAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEESGLYYNRHRYYDPLQG---RYI--TQD 299 EY G L +P + Q + E GL R Y+P G R++ QD Sbjct: 812 RHEYTPQGLLAAVTDPVGQRS------QWHYGEQGL---PVR-YEPANGAPWRFVYDQQD 861 >UniRef50_C6AKX3 Rhs family protein n=4 Tax=Aggregatibacter aphrophilus NJ8700 RepID=C6AKX3_AGGAN Length = 1917 Score = 199 bits (506), Expect = 2e-49, Method: Composition-based stats. Identities = 80/357 (22%), Positives = 127/357 (35%), Gaps = 36/357 (10%) Query: 4 DNRIARDAHY---LYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQ 60 I+R Y YD GRL ++ + +RT Y YD L Sbjct: 1431 HREISRSQGRLNGRYYYDDMGRLVQQQAGLANQQNAVQIDRT--YGYDELGHLSQTRTYF 1488 Query: 61 YAEPL---VESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQV--------------- 102 +P +++Y YD LG R+AK + + S Sbjct: 1489 PHKPFDAPQQTQYQYDNLG-RIAKADSQGHSQHFYFDPASNLINDPTEKVIDNRVVNYRG 1547 Query: 103 TWYGWDGDRLTTIQNDRTRIQTIYQPGSFTPLIRVE---TATGELAKTQRRSLADTLQQS 159 + +D Y L++ + E + L + +S Sbjct: 1548 IRFTYDSLGNLVECQAANGDYQRYTYDLKNRLVQADIRDRYKAESWVYEYDPLGRRVAKS 1607 Query: 160 GGEDGGSVVFPPVLVQMLDRLESEILAD------RVSEESRRWLASCGLTVEQMQNQMDP 213 G + L EI ++ + ++ S + E + Sbjct: 1608 KLNKQGEQQLHTQFIWDGSHLVQEIRTGNHQQNAEKTDRTFTYIYSEPGSYEPLAQCYKD 1667 Query: 214 VYTPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNE---ENPHQLQQLIRLP 270 I+ +H D G+P + ++G W YD WG+L+ + E Q RL Sbjct: 1668 GDNAEHTINYFHSDQIGIPREMTDSDGKLIWKGRYDAWGSLIRDSYRETASDSHQPFRLQ 1727 Query: 271 GQQYDEESGLYYNRHRYYDPLQGRYITQDPIGLKGGWNFYQYPLNPVQYIDSMGLAS 327 Q +DEE+GL+YN RYY+P+ GR+ITQDPI L GG N Y++ D +GL + Sbjct: 1728 NQYFDEETGLHYNFFRYYEPVLGRFITQDPIKLAGGNNLYRFEGTVQNQTDPLGLFA 1784 Score = 70.2 bits (170), Expect = 1e-10, Method: Composition-based stats. Identities = 48/285 (16%), Positives = 85/285 (29%), Gaps = 47/285 (16%) Query: 18 DRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYLYDPLGR 77 D+ GR+ +T +T + Y+ Q ++ TR A +LYD GR Sbjct: 1038 DKLGRVLRQTS---------PSGQTSYFEYNPQGQMTKLTRPDNA----MLYFLYDNDGR 1084 Query: 78 RVAK-------RVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQPGS 130 + + +R + L Q + Y ++ L + D T++ Sbjct: 1085 LIGQTDALGNMTRYRYDDSGNLIERLDALSQKSVYAYNDKGLLSSSTDPLGNNTLFAYDE 1144 Query: 131 FTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRL-----ESEIL 185 L +V +G + L Q+ + Q++ L ++ Sbjct: 1145 NFQLNQVTDCSGNQTCFKYNELGQLTSQTDALGNTTAYQYNDRQQLIAVLLPNQSQTRYQ 1204 Query: 186 ADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHL--YHCDHRGLPLALV------- 236 D+V S+ T Q + P + H YH D G + L Sbjct: 1205 YDKVGRLSQVIDPQGNQTSYQYRIDGLPTSKTNAQGHHFQYHYDQAGRLVGLTNENHATY 1264 Query: 237 ----STEGATEW---------CAEYDEWGNLLNEENPHQLQQLIR 268 + W EYD G L+ + + R Sbjct: 1265 RFVYDEQDRLIWEKGFDDKLTQYEYDAKGQLIRRTDYGVTEAPKR 1309 Score = 57.1 bits (136), Expect = 1e-06, Method: Composition-based stats. Identities = 40/259 (15%), Positives = 81/259 (31%), Gaps = 31/259 (11%) Query: 8 ARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVE 67 A+ H+ Y YD+ GRL T+ ++ T+R+ YD Q RL+ + Sbjct: 1238 AQGHHFQYHYDQAGRLVGLTN---------ENHATYRFVYDEQDRLIW----EKGFDDKL 1284 Query: 68 SRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQ 127 ++Y YD G+ + + + R + + ++L + + R Sbjct: 1285 TQYEYDAKGQLIRRTDYGVTEAPKRNKPAIRTAEFKY-----NQLGQMTEEHIRQGEQSS 1339 Query: 128 PGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILAD 187 +F+ + + D + E G +RL++ + Sbjct: 1340 RTTFSFDLNGQMTQVACGGQHIDFRYDATGRLIEEAHGDKKIAYEYDANNNRLKTVL--- 1396 Query: 188 RVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWCAE 247 + R + G N +H + ++G Sbjct: 1397 PSGDSIRYFYYGTGHLSGIKLNSQLISEMERDDLH----------REISRSQGRLNGRYY 1446 Query: 248 YDEWGNLLNEENPHQLQQL 266 YD+ G L+ ++ QQ Sbjct: 1447 YDDMGRLVQQQAGLANQQN 1465 >UniRef50_Q6LUC4 Putative uncharacterized protein n=1 Tax=Photobacterium profundum RepID=Q6LUC4_PHOPR Length = 532 Score = 199 bits (506), Expect = 2e-49, Method: Composition-based stats. Identities = 79/354 (22%), Positives = 127/354 (35%), Gaps = 49/354 (13%) Query: 13 YLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYLY 72 Y YD+ G + + D + Y YDSQ +L A+ L R Sbjct: 30 LQYEYDQKGNRKQ---------LILPDGQCLGYDYDSQQQL-SAITLNGADVLKVQR--- 76 Query: 73 DPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDG-DRLTTIQNDRTRIQTIYQ---- 127 D LGR + + + + +D ++L + T + Sbjct: 77 DKLGRELKRHQSNGITQHCDFAIQDNALGRQQFSYDALNQLQAHHQNNTTTHYQFDSFGN 136 Query: 128 -----------PGSFTPLIRVETAT------GELAKTQRRSLADTLQQSGGEDGGSVVFP 170 + L R ++ G A + A Q +G + Sbjct: 137 PSLGNPDFEESESTNDRLQRYQSKLFDYDKCGNQATVRDEDSAQHRQFNGFNQLTQLSHN 196 Query: 171 PVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMD--PVYTP----------A 218 + + +L + + +Y P Sbjct: 197 GRYSHYDYDALGRRSRKTTEQSTVDFLWDGDQLIGEHSQGQYRWYIYAPDDFTPLALIEN 256 Query: 219 RKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEES 278 + YH DH G P + +++G W A Y+ G + + +R GQ +D+ES Sbjct: 257 GTFYYYHTDHLGTPHTVTNSDGEVVWQATYNALGCAFISIDI--IHNPLRFQGQYHDQES 314 Query: 279 GLYYNRHRYYDPLQGRYITQDPIGLKGGWNFYQYPLNPVQYIDSMGLASKYGHL 332 GL+YNR RYYDP G++I QDPIGL GG N Y+Y NP+Q++D +GL+ K G + Sbjct: 315 GLHYNRFRYYDPSIGQFIHQDPIGLLGGINHYRYAPNPIQWVDPLGLSCKEGII 368 Score = 81.4 bits (199), Expect = 7e-14, Method: Composition-based stats. Identities = 50/227 (22%), Positives = 74/227 (32%), Gaps = 39/227 (17%) Query: 4 DNRIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAE 63 ++R+ R L+ YD+ G + +R +D HR ++ ++L TQ + Sbjct: 151 NDRLQRYQSKLFDYDKCGN---------QATVRDEDSAQHR-QFNGFNQL-----TQLSH 195 Query: 64 PLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQ 123 S Y YD LGRR K + D + WDGD+L + Sbjct: 196 NGRYSHYDYDALGRRSRKTTEQSTVD---------------FLWDGDQLIGEHSQGQYRW 240 Query: 124 TIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESE 183 IY P FTPL +E T T T+ S GE VV+ + S Sbjct: 241 YIYAPDDFTPLALIENGTFYYYHTDHLGTPHTVTNSDGE----VVWQATYNALGCAFISI 296 Query: 184 ILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRG 230 + ++ DP H D G Sbjct: 297 DIIHNPLRFQGQYHDQESGLHYNRFRYYDPSIGQ-----FIHQDPIG 338 >UniRef50_B7LTT0 Putative uncharacterized protein n=4 Tax=Enterobacteriaceae RepID=B7LTT0_ESCF3 Length = 1543 Score = 199 bits (506), Expect = 2e-49, Method: Composition-based stats. Identities = 79/348 (22%), Positives = 128/348 (36%), Gaps = 18/348 (5%) Query: 7 IARDAHYLYRYDRHGRLTEKTDLIPEGV--IRTDDERTHRYHYDSQHRLVHYTRTQYAEP 64 + Y D L + + + +R + + YD++ ++V + + ++E Sbjct: 1080 VTPLLDSRYHRDSRDNLRRLSCQYSQTMPMLREGAPQEDEFSYDARGQVVRHDQDGHSET 1139 Query: 65 LVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDG-DRLTTIQNDRTRIQ 123 + YD + + ++ + Y WDG RL +N RT ++ Sbjct: 1140 -----FRYDAAMNGLRSGGYPPRLPDAPANQVTLGGEF-RYTWDGFGRLARRENVRTGVK 1193 Query: 124 TIYQPGSFTPLIRVETATGELAKT---QRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRL 180 L+ VE +L ++ G V RL Sbjct: 1194 QRMHYDDAHRLVTVEILNDRDWSRVTFSYDALGRRTEKRAWRQGAEKPERTVFEWSGMRL 1253 Query: 181 ESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEG 240 E + + ++ P +++ YH G P + ++G Sbjct: 1254 CGEHNEKSPAAHTLYLYEENSYQPLARVDRSSGGNEPWQRVLYYHTLPNGYPQCMTDSDG 1313 Query: 241 ATEWCAEYDEWGNLLNEENPHQL----QQLIRLPGQQYDEESGLYYNRHRYYDPLQGRYI 296 W A WGN+ EEN QQ +R GQ D E+GL+YN RY+ P GR+ Sbjct: 1314 GIVWRARVQLWGNIRFEENRDIYSVHPQQNLRFAGQYLDRETGLHYNTFRYFLPESGRFS 1373 Query: 297 TQDPIGLKGGWNFYQYPLNPVQYIDSMGLASKYGHLNNGGYGARPNKP 344 DPIGL GG N Y Y NP+ YID +GL G ++G Y + N Sbjct: 1374 QPDPIGLAGGLNLYAYAPNPLSYIDPLGLCKLRG--SDGRYRSAQNIQ 1419 Score = 57.1 bits (136), Expect = 2e-06, Method: Composition-based stats. Identities = 51/271 (18%), Positives = 82/271 (30%), Gaps = 28/271 (10%) Query: 3 PDNRIAR-----DAHYLYRYDRHGRLTEKT--DLIPEGVIRTDDERTHRYHYDSQHRLVH 55 P N + R D + +D G + R +R R+HYD RL H Sbjct: 730 PLNNVTRLEWDTDGNNTVVHDAAGNTLHRRYNGRGQITEYRDCSDRLTRWHYDEWGRLTH 789 Query: 56 YTRTQYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGW-------MSLSRKPQVTWYGWD 108 +RY Y R + +VT + + Sbjct: 790 EVNAAGN----ITRYGYTTTDRLNTLTRPDGCTMQFAYNPAGELLRQQGFGGEVTLFTRN 845 Query: 109 GDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVV 168 T++ D + L R+ GE + ++++G Sbjct: 846 ARGQVTLRTDPAGYPLRFSYDPLGRLTRLYNEKGEAYSFEYDVRDHLIKETGLTGTEKTY 905 Query: 169 FPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDH 228 VL +L + E+ + + A LT + A + YH D Sbjct: 906 QRDVLGNLLAQTETPVDGGAPLLTRFEYDALGRLT----------ARSTASRRTEYHHDA 955 Query: 229 RGLPLALVSTEGATEWCAEYDEWGNLLNEEN 259 L ++ +GATE EYD+ G L E N Sbjct: 956 WQTTLRDITEDGATELRFEYDKLGQLTAEHN 986 Score = 49.4 bits (116), Expect = 3e-04, Method: Composition-based stats. Identities = 46/309 (14%), Positives = 79/309 (25%), Gaps = 54/309 (17%) Query: 14 LYRYDRHGRLTEKTDLIPE------------GVIRTDDERTHRYHYDSQHRLVH------ 55 + YD GRLT + + + D T ++ Y+ L+ Sbjct: 778 RWHYDEWGRLTHEVNAAGNITRYGYTTTDRLNTLTRPDGCTMQFAYNPAGELLRQQGFGG 837 Query: 56 --YTRTQYAEPLVESR---------YLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVT- 103 T+ A V R + YDPLGR + E + + T Sbjct: 838 EVTLFTRNARGQVTLRTDPAGYPLRFSYDPLGRLTRLYNEKGEAYSFEYDVRDHLIKETG 897 Query: 104 ------WYGWD--GDRLTTIQN---DRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSL 152 Y D G+ L + + T ++ + L +T Sbjct: 898 LTGTEKTYQRDVLGNLLAQTETPVDGGAPLLTRFEYDALGRLT--ARSTASRRTEYHHDA 955 Query: 153 ADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMD 212 T + EDG + + R E + L +E + + Sbjct: 956 WQTTLRDITEDGATEL----------RFEYDKLGQLTAEHNHSGCYRFDHDAPGNRTAEH 1005 Query: 213 PVYTPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDE-WGNLLNEENPHQLQQLIRLPG 271 + Y H E DE + + + + G Sbjct: 1006 FPDGRTLRHLYYGSGHLLQTRLDSDRGSEVIAEYERDELHREIRRSQGRLSQYRAYNICG 1065 Query: 272 QQYDEESGL 280 + SGL Sbjct: 1066 HLTRQSSGL 1074 Score = 46.3 bits (108), Expect = 0.002, Method: Composition-based stats. Identities = 47/284 (16%), Positives = 71/284 (25%), Gaps = 45/284 (15%) Query: 18 DRHGRLTEKTDLIPE----GVIRTDDERTHRYHY-------DSQH-------RLVHYTRT 59 D G +T + + + R Y + D R+V + Sbjct: 534 DADGNVTLRCEYGKPHGLIQALYYPGGRGSHYRWQHFAAWTDDTGDARPAHWRVVEHWIQ 593 Query: 60 QYAE----PLVESRYL--YDPLGRRVAKRVWRRERDLTGWMSLSRKPQVT-------WYG 106 + A P+ YL YD G+ + R L W +L + + T Sbjct: 594 EGATGNTPPVRLEHYLFDYDVPGQSLRLVQEGRGESLWRWDALGQITEQTDELGAVWKNV 653 Query: 107 WDGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGS 166 W+ R D Y + + A G+ L G Sbjct: 654 WNSSRQLLSHTDPLGNTETYSYDDYGNVAVFTDALGQKTAITW--LPGFSFPVKWIQPGQ 711 Query: 167 VVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHC 226 V+ D L + V+ W TV V+ A Sbjct: 712 AVWTYDYNNAGDVLSITDPLNNVTRL--EWDTDGNNTV---------VHDAAGNTLHRRY 760 Query: 227 DHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRLP 270 + RG YDEWG L +E N Sbjct: 761 NGRGQITEYRDCSDRLT-RWHYDEWGRLTHEVNAAGNITRYGYT 803 >UniRef50_Q6LUC6 Hypothetical nucleotidyltransferase n=1 Tax=Photobacterium profundum RepID=Q6LUC6_PHOPR Length = 1352 Score = 198 bits (502), Expect = 5e-49, Method: Composition-based stats. Identities = 81/333 (24%), Positives = 127/333 (38%), Gaps = 54/333 (16%) Query: 17 YDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYLYDPLG 76 +D HGRL ++ + D +YHYDS +L+ L ++ YD L Sbjct: 863 FDSHGRLQQQ-----KWTSEHDSRHRRQYHYDSASQLIAIQ----DNALGRQQFSYDAL- 912 Query: 77 RRVAKRVWRRERDLTGWMSLSR-------------------KPQVTWYGWD--GDRLTTI 115 ++ + + S + Q + +D G++ T Sbjct: 913 NQLQEHHQNNTTTNYQFDSFGNPSLGNLDFEECESTNDRLQRYQSKLFDYDKCGNQSTVR 972 Query: 116 QNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQ 175 D + + F L + L+ R S D + + Sbjct: 973 DEDSAQHRQF---NGFNQLTQ-------LSHNGRYSHYDYDALGRRSRKTTEQHTVDFLW 1022 Query: 176 MLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLAL 235 D+L E RW + + ++ YH DH G P + Sbjct: 1023 DGDQLIGEHCQG-----QYRWYIYAPNDFTPLALIDNGA------LYFYHTDHIGTPHTV 1071 Query: 236 VSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEESGLYYNRHRYYDPLQGRY 295 +EG W A Y+ G + + +R GQ +D+ESGL+YNR RYYDP G++ Sbjct: 1072 TDSEGEVVWQATYNALGCAAISIDI--IHNPLRFQGQYHDQESGLHYNRFRYYDPSIGQF 1129 Query: 296 ITQDPIGLKGGWNFYQYPLNPVQYIDSMGLASK 328 I QDPIGL GG N Y+Y NP+Q++D +GL+ K Sbjct: 1130 IHQDPIGLLGGINHYRYAPNPIQWVDPLGLSCK 1162 Score = 77.9 bits (190), Expect = 8e-13, Method: Composition-based stats. Identities = 48/227 (21%), Positives = 72/227 (31%), Gaps = 39/227 (17%) Query: 4 DNRIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAE 63 ++R+ R L+ YD+ G + +R +D HR ++ ++L TQ + Sbjct: 949 NDRLQRYQSKLFDYDKCGN---------QSTVRDEDSAQHR-QFNGFNQL-----TQLSH 993 Query: 64 PLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQ 123 S Y YD LGRR K + D + WDGD+L Sbjct: 994 NGRYSHYDYDALGRRSRKTTEQHTVD---------------FLWDGDQLIGEHCQGQYRW 1038 Query: 124 TIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESE 183 IY P FTPL ++ T T+ S GE VV+ + S Sbjct: 1039 YIYAPNDFTPLALIDNGALYFYHTDHIGTPHTVTDSEGE----VVWQATYNALGCAAISI 1094 Query: 184 ILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRG 230 + ++ DP H D G Sbjct: 1095 DIIHNPLRFQGQYHDQESGLHYNRFRYYDPSIGQ-----FIHQDPIG 1136 Score = 55.6 bits (132), Expect = 4e-06, Method: Composition-based stats. Identities = 59/370 (15%), Positives = 96/370 (25%), Gaps = 86/370 (23%) Query: 6 RIARDAHYLYRYDRHGRLTEK-TDLIPEGVIRTDDE------------------RTHRYH 46 RI + Y +RY GR+ T+ V+R D YH Sbjct: 289 RIDQTTQYGFRYSSAGRMIGIETNGFLRLVLRYDASGHLVTVEMPSKEDDSIVNVIASYH 348 Query: 47 YDSQHRLVHYTRTQYAEPLVESRYLY--DPLGRRVAKRVWRRERDLTGWMSLS------- 97 Y++ +LV T RY Y D L ++ W+ Sbjct: 349 YNADGQLVAATNRN----KQTERYQYRDDHL--LTCRQRASGFSHYFEWLGSGSTAKCRA 402 Query: 98 ----RKPQVTWYGWDGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLA 153 + +D +TI D Q Y L++ + G + + L Sbjct: 403 QWGDNHCYQYQFDYDNSASSTISTDSRGHQWHYYHNEQGLLVKKISPAGAAWRYEYNQLG 462 Query: 154 DTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSEESRRWL----ASCGLTVEQMQN 209 + + + R L ++ G N Sbjct: 463 LKVAGIDPNGSITRYDYNAQGLLCALHAPSGAITRYCYNRFGQLTEQCSALGHITTHRFN 522 Query: 210 QMDPVYT---PARKIHLYHCDHRGLPLALVSTEGA-------------------TEWCAE 247 + + P Y DH+G + ++ G Sbjct: 523 SLGLLLETRHPEGNKDHYEYDHQGRLIKHLAAGGQCYGYWWNAEGLLTAFKQNHAVTRYS 582 Query: 248 YDEWGNLLNEENPHQLQQLIRLPGQQYDEESGLYYNRHRYYDP--------------LQG 293 YD +G + NP +Y +S + R+Y P G Sbjct: 583 YDVYGEINGLANPDGSII-------EYQRDSAGNIAQTRHYHPDHETPAVEQSYTYDDAG 635 Query: 294 RYIT-QDPIG 302 R I+ DPIG Sbjct: 636 RLISHTDPIG 645 Score = 50.2 bits (118), Expect = 2e-04, Method: Composition-based stats. Identities = 45/287 (15%), Positives = 75/287 (26%), Gaps = 52/287 (18%) Query: 14 LYRYDRHGRLTEKTDLIPEGVIRT-----------DDERTHRYHYDSQHRL--------- 53 Y YD GRL + + + RY YD + Sbjct: 539 HYEYDHQGRLIKHLAAGGQCYGYWWNAEGLLTAFKQNHAVTRYSYDVYGEINGLANPDGS 598 Query: 54 --------------VHYTRTQYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRK 99 + + P VE Y YD GR ++ W LS+ Sbjct: 599 IIEYQRDSAGNIAQTRHYHPDHETPAVEQSYTYDDAGRLISHTDPIGRMSQIVWGGLSQP 658 Query: 100 PQV-------TWYGWDGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRR-- 150 + Y +D +R T + + + R G Sbjct: 659 ETIIQPDGSYVAYQYDQERNLTGITRSDGCHYQLEWDAEERVSRTIGFDGRDQHYAYDAN 718 Query: 151 ------SLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTV 204 D + G V+ + + R D + + L Sbjct: 719 SQLMTVREGDRTVHLVRDTAGRVIEKQTVAESGTRDSQLYDYDVIGRLLNANTTARKLRF 778 Query: 205 E-QMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDE 250 E Q Q++ + A ++ Y D +G L+ +G +YDE Sbjct: 779 EWQGSKQLNTTWQDAWQLQ-YEYDQQGNRTQLILPDG-LRLGYQYDE 823 Score = 49.0 bits (115), Expect = 4e-04, Method: Composition-based stats. Identities = 58/346 (16%), Positives = 96/346 (27%), Gaps = 63/346 (18%) Query: 2 WPDNRIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQY 61 W DN + + YD + + Y+++ Q LV Sbjct: 404 WGDNHCYQYQ---FDYD---------NSASSTISTDSRGHQWHYYHNEQGLLVKKISPAG 451 Query: 62 AEPLVESRYLYDPLGRRVAK-----RVWRRERDLTGWMSLSRKPQ--VTWYGWDGDRLTT 114 A RY Y+ LG +VA + R + + G + P +T Y ++ T Sbjct: 452 A----AWRYEYNQLGLKVAGIDPNGSITRYDYNAQGLLCALHAPSGAITRYCYNRFGQLT 507 Query: 115 IQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLV 174 Q T ++ S L+ G + L + G + Sbjct: 508 EQCSALGHITTHRFNSLGLLLETRHPEGNKDHYE-YDHQGRLIKHLAAGGQCYGYWWNAE 566 Query: 175 QMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLA 234 +L + R S + + + + YH DH Sbjct: 567 GLLTAFKQNHAVTRYSYDVYGEINGLANPDGSIIEYQRDSAGNIAQTRHYHPDH------ 620 Query: 235 LVSTEGATEWCAEYDEWGNLLNEENPHQ----------------LQQLIRLPGQQYDEE- 277 A E YD+ G L++ +P +Q QYD+E Sbjct: 621 ---ETPAVEQSYTYDDAGRLISHTDPIGRMSQIVWGGLSQPETIIQPDGSYVAYQYDQER 677 Query: 278 --SGLYYNRHRYYDPL------QGRYITQDPIGLKGGWNFYQYPLN 315 +G+ + +Y R IG G Y Y N Sbjct: 678 NLTGITRSDGCHYQLEWDAEERVSR-----TIGFDGRDQHYAYDAN 718 >UniRef50_C1M4X0 Predicted protein n=1 Tax=Citrobacter sp. 30_2 RepID=C1M4X0_9ENTR Length = 1494 Score = 197 bits (501), Expect = 6e-49, Method: Composition-based stats. Identities = 83/384 (21%), Positives = 128/384 (33%), Gaps = 37/384 (9%) Query: 4 DNRIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAE 63 +N + + ++YD L +T + D R YHYD R+ + + Sbjct: 1046 ENGMRPVEAWHWQYDSRHNLLSETQIS--------DYRYQGYHYDDGDRVCRHDTSFRG- 1096 Query: 64 PLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQ 123 + + YD G + + + LT Y G R+ + Sbjct: 1097 ---VTHHTYDAAGNLL--TAPQAGQSLTHNRQTQCGNGACRYDVYG-RMVQKPGPGGMWR 1150 Query: 124 TIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESE 183 Y ++T A R + T G ++ Sbjct: 1151 YGYDSEHRMTEAVLDTPDATGAGNTRHRVIFTYDPFGRRTEKRSEVTVSAPDDGRVTGAQ 1210 Query: 184 ILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIH---------LYHCDHRGLPLA 234 + V E R + + YTP +++ Y C H G+P A Sbjct: 1211 EVTTFVWEGFRLLAETRNGQSLVYVYEGAGSYTPLARVYGTGDKQRVDYYRCSHNGMPQA 1270 Query: 235 LVSTEGATEWCAEYDEWGNLLNEENPHQLQQ-----------LIRLPGQQYDEESGLYYN 283 L +G W + + WG +E + + +R GQ D E+GL+YN Sbjct: 1271 LTDEDGKLHWRQDVETWGETRSEYADEEGGRWRKIWGGAPEENLRFAGQYLDRETGLHYN 1330 Query: 284 RHRYYDPLQGRYITQDPIGLKGGWNFYQYPLNPVQYIDSMGL--ASKYGHLNNGGYGARP 341 RYY P GR+IT DPIGL GG N Y Y NP+ +ID +GL G+ Sbjct: 1331 TFRYYAPDMGRFITPDPIGLAGGINLYSYAPNPLSWIDPLGLLKCGLTGNEVGDASNLPV 1390 Query: 342 NKPPTPDPSKLPDIAKQLRLPYPI 365 KP T + D + P Sbjct: 1391 IKPGTKEWKLAVDTMRNNGSGKPN 1414 Score = 59.4 bits (142), Expect = 3e-07, Method: Composition-based stats. Identities = 53/298 (17%), Positives = 86/298 (28%), Gaps = 44/298 (14%) Query: 6 RIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHY--------- 56 R+ + ++YD GR++ TD + V R YD+++RL Sbjct: 803 RVGHNNPVRWQYDACGRVSVVTDPLGHTVRR---------EYDARNRLTRLYNESGELYR 853 Query: 57 --------TRTQYAEPLVESRYLYDPLGRRVAKRVWRRERD-LTGWMSLSRKPQVT-WYG 106 + + +RY YD R V+K D LT + +VT Sbjct: 854 FIHGINGHLTEERGLDGIITRYEYDVCDRVVSKTWAAGTPDALTHRWQYNAAGEVTDKQT 913 Query: 107 WDGDRLTTIQNDRTRIQTI-YQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGG 165 DG + T + Y PG+ +P RV L + ++ G Sbjct: 914 PDGHTVYRYTTGGTLQAALFYPPGAESPAQRVLLEHDRLGRLTAEENDSGRVSYSLDELG 973 Query: 166 SVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYH 225 + + + +S L + + + Sbjct: 974 NRTSVQLPDGRSLKTLYYGSGHALSISLDERLITEFTRDNLHREISRTQGGLTTRTRY-- 1031 Query: 226 CDHRGLPLALVS----TEG---ATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQYDE 276 D G A G W +YD NLL+E R G YD+ Sbjct: 1032 -DRLGR-QARRDIYRKENGMRPVEAWHWQYDSRHNLLSETQ----ISDYRYQGYHYDD 1083 Score = 43.3 bits (100), Expect = 0.020, Method: Composition-based stats. Identities = 54/349 (15%), Positives = 90/349 (25%), Gaps = 72/349 (20%) Query: 15 YRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQ---HRLVHYTRTQYAEPLVESRYL 71 Y Y G L TD + +R D Y D+ HR+ R +Y + Sbjct: 513 YDYTPQGELCRVTDAD-DVCLREFD-----YTPDALMAGHRMPGGARHRYQWKKFSDGW- 565 Query: 72 YDPLGRRVAKRVWRRERDLTGWMSLSR-------KPQVTWYGWDGDRLTTIQNDRTRIQT 124 R VA + G+ + + WD L D + Sbjct: 566 -----RVVAYESSGGDSATIGYDLTQGVTTVTHGGGETHRHEWDHRYLVEKYTDESGQVW 620 Query: 125 IYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEI 184 Y L R G + + + ++ V + L+ + Sbjct: 621 GYDWNEDGQLSRTVDPLGASRAYHYDNAGNMILETDPLGRA------VCTRWLEDRALPV 674 Query: 185 LADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEW 244 ++ + N + Y D G + +G Sbjct: 675 QVSGPEGSVHQYFYDANFGLRAEINALGLCC-------YYRRDEWGQVVEFTDEKGG-VQ 726 Query: 245 CAEYDEWGNLLNEENPHQLQQLIRL-PGQQYDEESGLYYNRHRY-YDPLQGR-------- 294 +E G L++ ++ R + EE RY Y P GR Sbjct: 727 RFSCNERGQLISVQDCSGKTTQYRYDAAYRLAEEVDAAGESTRYVYSP-AGRLKTVSGAE 785 Query: 295 -------YITQD-PIGLKGGWNFYQYPLNPVQY-----------IDSMG 324 + Q P + G N NPV++ D +G Sbjct: 786 DWTASLSWTAQGLPESYRVGHN------NPVRWQYDACGRVSVVTDPLG 828 >UniRef50_A6V8C8 Putative uncharacterized protein n=7 Tax=Pseudomonas aeruginosa RepID=A6V8C8_PSEA7 Length = 1319 Score = 196 bits (499), Expect = 1e-48, Method: Composition-based stats. Identities = 109/325 (33%), Positives = 134/325 (41%), Gaps = 69/325 (21%) Query: 2 WPDNRIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQY 61 W NR+ R A Y +D G L E+ D R YD RLV TR Sbjct: 914 WLGNRVQRIAGNRYHFDAQGNLVERVGA---------DGERLRLAYDGAQRLVRLTREAA 964 Query: 62 AEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTR 121 VE+RY YD L RR+AK V R + Q +GWDGDR +R Sbjct: 965 DGTRVEARYRYDALSRRIAKSVLRDGVE-----------QQVRFGWDGDRQCAEAFERQL 1013 Query: 122 IQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLE 181 T+++PG F PL+R+E A P ++L Sbjct: 1014 RTTVHEPGGFVPLLRLEQAR----------------------------EPDTPELL---- 1041 Query: 182 SEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGA 241 E RR A+ G + Q P AR +H DH G PL L G Sbjct: 1042 ----------ELRRTFAAEGQPLP---AQCVPELGEAR-FAFFHTDHLGTPLQLSDERGQ 1087 Query: 242 TEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEESGLYYNRHRYYDPLQGRYITQDPI 301 W +W + + P Q IR GQ +DEESGLYYNR+RYY P GRY +QDP+ Sbjct: 1088 LRWQGVAHDWRAVEPDREPGA--QPIRFQGQYHDEESGLYYNRYRYYLPEAGRYASQDPL 1145 Query: 302 GLKGGWNFYQYPLN-PVQYIDSMGL 325 GL GG N Y Y LN P D GL Sbjct: 1146 GLGGGPNPYTYALNAPSVAYDPTGL 1170 Score = 68.7 bits (166), Expect = 4e-10, Method: Composition-based stats. Identities = 56/290 (19%), Positives = 87/290 (30%), Gaps = 44/290 (15%) Query: 9 RDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVES 68 A +RYD RL E+T D R RY Y++ LV E+ Sbjct: 609 NGAQAHFRYDPLDRLVEETGF---------DGRRQRYRYNAADELVAREDADG----RET 655 Query: 69 RYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGD-RLTTIQNDRTRIQTIYQ 127 Y YD GR + R+ + V Y W D RL + ++ Y Sbjct: 656 AYAYDRDGRLASVRIPASDAAPAL---------VERYRWLADGRLASAVGPDCEVRYEYD 706 Query: 128 P----------GSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQML 177 + + VE + EL Q D + G + ++ + Sbjct: 707 EVGNLRLESQLHADGWVYSVEHSHDELGMRQTSRYGDAPPVTWLTYGAGHLHGALVGAIE 766 Query: 178 DRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHL--------YHCDHR 229 E + L V ++R S L V++ + +R Y D Sbjct: 767 LAFERDALQREVRRDARHGGKSDALFVQERRYGALGRLQESRLRLAGGADWQRGYRYDGL 826 Query: 230 GLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRL--PGQQYDEE 277 G + + EYD G LL + G + D+E Sbjct: 827 GQLVGI-DDNQQPAVRYEYDLAGRLLGSRRAGLPDRRYHYDAAGNRLDDE 875 Score = 64.4 bits (155), Expect = 9e-09, Method: Composition-based stats. Identities = 38/202 (18%), Positives = 62/202 (30%), Gaps = 24/202 (11%) Query: 11 AHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRY 70 + Y YD GRLT +TD + + R YD +L+ + Y Sbjct: 506 QTWRYEYDSEGRLTCETDPLGQVTRR---------RYDPLGQLIGLALADGS----ALGY 552 Query: 71 LYDPLGR--RVAKRVWRRERDLTGWMSL-------SRKPQVTWYGWDGDRLTTIQNDRTR 121 YD LGR R++ R G L S + + G LT + + Sbjct: 553 AYDALGRQTRISDAEGRATLFSWGHGDLLALVSDASGRELSYQHDEAGRLLTLTNENGAQ 612 Query: 122 IQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLE 181 Y P L+ G + + + + + + + + ++ Sbjct: 613 AHFRYDP--LDRLVEETGFDGRRQRYRYNAADELVAREDADGRETAYAYDRDGRLASVRI 670 Query: 182 SEILADRVSEESRRWLASCGLT 203 A E RWLA L Sbjct: 671 PASDAAPALVERYRWLADGRLA 692 Score = 61.7 bits (148), Expect = 5e-08, Method: Composition-based stats. Identities = 48/292 (16%), Positives = 80/292 (27%), Gaps = 57/292 (19%) Query: 8 ARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRY--------HY------------ 47 A + + YD GRL D + R D + Y Sbjct: 374 ADGSRTEFDYDLFGRLVALRDPLGRETRRRRDGQGRTLEEETPGKARYRKTLDEETGLLV 433 Query: 48 ---DSQHRLVHYTRTQYA------EPLVESRYLY-DPLGRRVAKRVWRRERDLTGWMSLS 97 D+ R + R + P +RY Y D R+ R R + Sbjct: 434 ELEDAMQRRWRFERDERGNPVTVHGPAGSTRYRYEDA---RLPDRPTR---------IVD 481 Query: 98 RKPQVTWYGWDGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQ 157 + W+ L D + Y+ S L G++ + + L + Sbjct: 482 PRGGERRLEWNRLGLLAALTDCSGQTWRYEYDSEGRLTCETDPLGQVTRRRYDPLGQLI- 540 Query: 158 QSGGEDGGSVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTP 217 G ++ L D L + + + G + + + Sbjct: 541 ------GLALADGSALGYAYDALGRQTRISDAEGRATLFSWGHGDLLALVSD------AS 588 Query: 218 ARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRL 269 R++ H D G L L + GA YD L+ E +Q R Sbjct: 589 GRELSYQH-DEAGRLLTLTNENGAQA-HFRYDPLDRLVEETGFDGRRQRYRY 638 Score = 61.0 bits (146), Expect = 1e-07, Method: Composition-based stats. Identities = 54/257 (21%), Positives = 80/257 (31%), Gaps = 31/257 (12%) Query: 9 RDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVES 68 R ++R G L TD +T RY YDS+ RL T + Sbjct: 483 RGGERRLEWNRLGLLAALTDC---------SGQTWRYEYDSEGRLTCETDPLG----QVT 529 Query: 69 RYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQV-------TWYGWDGDRLTTIQNDRTR 121 R YDPLG+ + + + +L R+ ++ T + W L + +D + Sbjct: 530 RRRYDPLGQLIGLALADGSALGYAYDALGRQTRISDAEGRATLFSWGHGDLLALVSDASG 589 Query: 122 IQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLE 181 + YQ L+ + G A R D L + G DG + L E Sbjct: 590 RELSYQHDEAGRLLTLTNENGAQAHF-RYDPLDRLVEETGFDGRRQRYRYNAADELVARE 648 Query: 182 SEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGA 241 D E+ G D + G + V + Sbjct: 649 -----DADGRETAYAYDRDGRLASVRIPASDAAPALVERYRWL---ADGRLASAVGPDCE 700 Query: 242 TEWCAEYDEWGNLLNEE 258 EYDE GNL E Sbjct: 701 V--RYEYDEVGNLRLES 715 Score = 44.4 bits (103), Expect = 0.010, Method: Composition-based stats. Identities = 40/296 (13%), Positives = 74/296 (25%), Gaps = 36/296 (12%) Query: 3 PDNR----IARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDER------THRYHYDSQHR 52 D R + D Y YD G L ++ L +G + + + Y Sbjct: 687 ADGRLASAVGPDCEVRYEYDEVGNLRLESQLHADGWVYSVEHSHDELGMRQTSRYGDAPP 746 Query: 53 LVHYTRTQYA-----EPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGW 107 + T +E + D L R V + + ++ R + Sbjct: 747 VTWLTYGAGHLHGALVGAIELAFERDALQREVRRDARHGGKSDALFVQERRYGALGRLQE 806 Query: 108 DGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSV 167 RL Q Y+ L+ ++ + + L Sbjct: 807 SRLRLA----GGADWQRGYRYDGLGQLVGIDDNQQPAVRYEYDLAGRLLGSRRAGLPDRR 862 Query: 168 VFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVE---QMQNQMDPVYTPARKI--- 221 LD + L G T + + P ++ Sbjct: 863 YHYDAAGNRLDDEVANRREAGRQAFEHNELYRSGFTRSASGESETGEAPQRWLGNRVQRI 922 Query: 222 --HLYHCDHRGLPLALVSTEGATEWCAEYDEWGN------LLNEENPHQLQQLIRL 269 + YH D +G + V +G YD G + +++ R Sbjct: 923 AGNRYHFDAQGNLVERVGADGERL-RLAYD--GAQRLVRLTREAADGTRVEARYRY 975 Score = 44.0 bits (102), Expect = 0.011, Method: Composition-based stats. Identities = 43/215 (20%), Positives = 64/215 (29%), Gaps = 31/215 (14%) Query: 12 HYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYL 71 + D R + ++D Y + RL + Y Sbjct: 766 ELAFERDALQREVRR---DARHGGKSDALFVQERRYGALGRLQESRLRLAGGADWQRGYR 822 Query: 72 YDPLGRRVA-----KRVWRRERDLTGWMSLSRKP----QVTWYGWDGDRL-TTIQNDRTR 121 YD LG+ V + R E DL G + SR+ + Y G+RL + N R Sbjct: 823 YDGLGQLVGIDDNQQPAVRYEYDLAGRLLGSRRAGLPDRRYHYDAAGNRLDDEVANRREA 882 Query: 122 IQTIYQPGS-----FTPLIRVETATGELAK-------------TQRRSLADTLQQSGGED 163 + ++ FT E+ TGE + L + G D Sbjct: 883 GRQAFEHNELYRSGFTRSASGESETGEAPQRWLGNRVQRIAGNRYHFDAQGNLVERVGAD 942 Query: 164 GGSVVFPPVLVQMLDRLESEILADRVSEESRRWLA 198 G + Q L RL E E R+ A Sbjct: 943 GERLRLAYDGAQRLVRLTREAADGTRVEARYRYDA 977 >UniRef50_B3PEN8 Rhsfamily protein n=2 Tax=Cellvibrio japonicus Ueda107 RepID=B3PEN8_CELJU Length = 1401 Score = 196 bits (497), Expect = 2e-48, Method: Composition-based stats. Identities = 90/419 (21%), Positives = 154/419 (36%), Gaps = 53/419 (12%) Query: 8 ARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVE 67 A +Y YD + K EG+ Y YD+ +RL + + Sbjct: 980 TELAKAVYEYDLEQNI--KKIERGEGIFN--------YGYDNLYRLTTADSPE-GYAAND 1028 Query: 68 SRYLYDPLGRRVAKRV----WRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQ 123 + YD +G R + + + T Y ++ + T Q + I Sbjct: 1029 ETFGYDGVGNRTTHTENGISANQSYNQKNQLQAIDDANDTTYTYNANGHTKTQTKNS-IT 1087 Query: 124 TIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESE 183 T Y+ LI V+ +A+ ++++ ++ + + Sbjct: 1088 TEYRYNHEERLIEVKRDDTTIAEYAYNPHGQRVKKTVNGVTTWYLYNGNGLAAEYSSTGQ 1147 Query: 184 ILADRVSEESRRWLASCGLTVEQMQNQMDPVY--TPARKIHLYHCDHRGLPLALVSTEGA 241 ++ + + W+ DP++ T A +++ YH DH G P ++ G Sbjct: 1148 LIKEYHFHPQKTWM-------------TDPLFQRTAAGEVYYYHNDHLGTPQQMLDDAGN 1194 Query: 242 TEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEESGLYYNRHRYYDPLQGRYITQDPI 301 W A+Y +G ++ +R PGQ +D E+GL++N R YD GRYI DPI Sbjct: 1195 IVWEAQYSAFGK--AHITIDTVENNLRFPGQYFDSETGLHHNYFRDYDSALGRYIQSDPI 1252 Query: 302 GLKGGWNFYQYPL-NPVQYIDSMGLASKYGH------LNNGGYGARPNKPPTPDPSKLPD 354 GL GG+N Y Y NP ID +GL + G N P+K+ Sbjct: 1253 GLGGGFNTYVYAYQNPAVLIDPLGLYVPSDLPENCKVITTGSGIRDENDVKMGPPTKVFQ 1312 Query: 355 IA-------KQLRLPYPIDQASSAPNVFKTFFRALSPYDYTLYCRKWVKPNLTCTPQDD 406 + K++R +D ++K Y Y Y KW+ + C +D+ Sbjct: 1313 VIIPFIKFKKKVRDHNDVDGKILKYELWKQTI----TYMYKSY--KWMTYYVECQEEDE 1365 Score = 50.2 bits (118), Expect = 2e-04, Method: Composition-based stats. Identities = 38/233 (16%), Positives = 60/233 (25%), Gaps = 19/233 (8%) Query: 40 ERTHRYHYDSQHRLVHYTRTQYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRK 99 T Y YD+ L+ + +RY YD G+ K + T Sbjct: 444 GITTTYEYDTSGNLITLVEAKGTPDERTTRYTYDEFGQIKTKITGESVANNTELA----- 498 Query: 100 PQVTWYGWDGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQS 159 VT+Y +D + I I L +T A T + + Sbjct: 499 --VTYYEYD--QYGNIIQVMDPEGNITHYSDHDALGNAQTIIDARAHLLPVVEQYTWKNT 554 Query: 160 GGEDGGSVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYT--- 216 G +L + + E + + +A+ G V N T Sbjct: 555 YDAAG------NLLTRRDPYNKGETYTYTKTGDLETVIAAGGSKVTLTSNANGQPLTITD 608 Query: 217 PARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRL 269 K+ D G G A YD G + + Sbjct: 609 DNNKVTKLQYDKAGRLTVTTDANGNKSQTA-YDAQGRVFRSVDGEGNTTQYNY 660 Score = 49.4 bits (116), Expect = 3e-04, Method: Composition-based stats. Identities = 22/111 (19%), Positives = 38/111 (34%), Gaps = 12/111 (10%) Query: 8 ARDAHYLYRYDRHGRLTEKTDLIPE------------GVIRTDDERTHRYHYDSQHRLVH 55 A+D +Y YD R+ + TD ++ + R Y YD RL+ Sbjct: 715 AQDNETVYEYDVLSRVKKITDAEGGVTEFSYDARDNLLQVKDPEGRLTIYTYDKNDRLLT 774 Query: 56 YTRTQYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYG 106 T+ + RY YD G + +E + +R + + Sbjct: 775 ETKDGDQNTDRQRRYAYDQNGNLIGSINPEQEMTTYEFDQANRLVKTQVFA 825 Score = 47.1 bits (110), Expect = 0.001, Method: Composition-based stats. Identities = 40/273 (14%), Positives = 78/273 (28%), Gaps = 35/273 (12%) Query: 17 YDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYLYDPLG 76 YD G L + R + Y Y L ++ + S + G Sbjct: 555 YDAAGNLLTR---------RDPYNKGETYTYTKTGDLETVIAAGGSKVTLTS----NANG 601 Query: 77 ---------RRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTIY- 126 +V K + + LT + T Y G ++ + Q Y Sbjct: 602 QPLTITDDNNKVTKLQYDKAGRLTVTTDANGNKSQTAYDAQGRVFRSVDGEGNTTQYNYV 661 Query: 127 -------QPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDR 179 Q ++ L+ + TQ+ + + +++ G + G++ Sbjct: 662 EDLLRSIQYPTYKELLEYDNRNRVKQTTQQANSRNYIRKHGYDPLGNITNSTDAQDNETV 721 Query: 180 LESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALV--- 236 E ++L+ ++ + V P ++ +Y D L Sbjct: 722 YEYDVLSRVKKITDAE--GGVTEFSYDARDNLLQVKDPEGRLTIYTYDKNDRLLTETKDG 779 Query: 237 STEGATEWCAEYDEWGNLLNEENPHQLQQLIRL 269 + YD+ GNL+ NP Q Sbjct: 780 DQNTDRQRRYAYDQNGNLIGSINPEQEMTTYEF 812 Score = 45.9 bits (107), Expect = 0.004, Method: Composition-based stats. Identities = 36/229 (15%), Positives = 62/229 (27%), Gaps = 42/229 (18%) Query: 7 IARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLV 66 I Y Y+ +G +T + T Y Y+ + RL+ R Sbjct: 1062 IDDANDTTYTYNANG----------HTKTQTKNSITTEYRYNHEERLIEVKRDD----TT 1107 Query: 67 ESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTIY 126 + Y Y+P G+RV K V TWY ++G+ L + ++ Y Sbjct: 1108 IAEYAYNPHGQRVKKTV---------------NGVTTWYLYNGNGLAAEYSSTGQLIKEY 1152 Query: 127 QPGS-----FTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLE 181 PL + T + Q +D G++V+ Sbjct: 1153 HFHPQKTWMTDPLFQ---RTAAGEVYYYHNDHLGTPQQMLDDAGNIVWEAQYSAFGKAHI 1209 Query: 182 SEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRG 230 + + ++ S D D G Sbjct: 1210 TIDTVENNLRFPGQYFDSETGLHHNYFRDYDSALG-----RYIQSDPIG 1253 >UniRef50_C9NF93 YD repeat protein n=1 Tax=Streptomyces flavogriseus ATCC 33331 RepID=C9NF93_9ACTO Length = 1536 Score = 195 bits (494), Expect = 4e-48, Method: Composition-based stats. Identities = 82/335 (24%), Positives = 118/335 (35%), Gaps = 56/335 (16%) Query: 10 DAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYT------RTQYAE 63 + D GR+T T RY YD+ + R + A Sbjct: 1133 SGVRRFDLDAVGRVTSSHSA----------HWTERYAYDAAGNQTSASLPKSHPRQEAAG 1182 Query: 64 P----------LVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDG-DRL 112 P RY +D GR V ++ LSRK Y WD DRL Sbjct: 1183 PRSYKGTRVSRAGNVRYEHDAQGRVVLRQKTH----------LSRKADTWRYQWDAEDRL 1232 Query: 113 TTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPV 172 ++ + YQ + RR+ L ++F Sbjct: 1233 VSLTTPDGTL-WRYQYDALG----------------RRTAKQRLADDSQTVLDEIIFVWD 1275 Query: 173 LVQMLDRLESEILADRVSEESRRWLASCGLT-VEQMQNQMDPVYTPARKIHLYHCDHRGL 231 V + + ++ R + L E++ Q P T + D G Sbjct: 1276 GVTLCEESSYDLAMLRYVTLTWDHDGIRPLAQTERVATQGAPQDTVDERFFAIITDLVGT 1335 Query: 232 PLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEESGLYYNRHRYYDPL 291 P L+ G W WG ++ +R PGQ +D+ES L+YN RYYDP Sbjct: 1336 PTELIDESGFISWRVRRSVWGTTEWAKDSSAYT-PLRFPGQYFDQESLLHYNYLRYYDPD 1394 Query: 292 QGRYITQDPIGLKGGWNFYQYPLNPVQYIDSMGLA 326 RYI+ DPIGL+GG N + Y NP +ID +GL+ Sbjct: 1395 VSRYISPDPIGLEGGPNPHWYGPNPYTWIDPLGLS 1429 Score = 54.0 bits (128), Expect = 1e-05, Method: Composition-based stats. Identities = 48/334 (14%), Positives = 83/334 (24%), Gaps = 72/334 (21%) Query: 3 PDNRIA-----RDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTH-----------RYH 46 P RI Y YD RL + + + + +E + Sbjct: 932 PAGRIQCEIDFDHRTLSYAYDSASRLVSRKNGLGQTTFFEHNELGQVLHKKTVDSVTTFE 991 Query: 47 YDSQHRLVHYTRTQYAEPLVESRY---------------LYDPLGRRVAKRVWRRERDLT 91 YD L + + RY YD LGRR + Sbjct: 992 YDIFDELAKAASSDTTITRMRDRYGRLKSETVNGRTSTFAYDDLGRRTGRTTPSGAISTW 1051 Query: 92 GWMSLSRKPQVT------WYGWDGD----------------------RLTTIQ---NDRT 120 + + R+ +T + D RLT Q +RT Sbjct: 1052 TYDAAGRRTSLTSSGRTLTFEHDAMGQELVRRVGADITLRNTFDVMGRLTDEQVISGERT 1111 Query: 121 RIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRL 180 Q Y L + + + ++ + Q L Sbjct: 1112 IQQRGYHYRGDGGLTSINDRLSGVRRFDLDAVGRVTSSHSAHWTERYAYDAAGNQTSASL 1171 Query: 181 -ESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHL--------YHCDHRGL 231 +S + S + + ++ +K HL Y D Sbjct: 1172 PKSHPRQEAAGPRSYKGTRVSRAGNVRYEHDAQGRVVLRQKTHLSRKADTWRYQWDAEDR 1231 Query: 232 PLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQ 265 ++L + +G W +YD G ++ Q Sbjct: 1232 LVSLTTPDGTL-WRYQYDALGRRTAKQRLADDSQ 1264 Score = 47.9 bits (112), Expect = 8e-04, Method: Composition-based stats. Identities = 43/260 (16%), Positives = 79/260 (30%), Gaps = 34/260 (13%) Query: 5 NRIARDA-HYLYRYDRHGRLTEKTDLIPEGVIRT------------DDERTHRYHYDSQH 51 R+ D + YD G TD + + D + + YDS Sbjct: 854 RRLEADGTEQSWVYDGEGNCIRHTDALGGVTVHEYTDFDLLTGRTDPDGARYEFSYDSNL 913 Query: 52 RLVHYTRTQYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSR-------KPQVTW 104 +L + Q + +YLYDP GR + + + S SR Q T+ Sbjct: 914 QLTQVSNPQG----LTWKYLYDPAGRIQCEIDFDHRTLSYAYDSASRLVSRKNGLGQTTF 969 Query: 105 YGWDGDRLTTIQNDRTR-IQTIYQPGSFTPLIRVETATGELAKTQRRSLA---DTLQQSG 160 + + + L + + +T T ++ F L + ++ + + + R +T+ Sbjct: 970 F--EHNELGQVLHKKTVDSVTTFEYDIFDELAKAASSDTTITRMRDRYGRLKSETVNGRT 1027 Query: 161 GEDGGSVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARK 220 + S D + + LT E + V Sbjct: 1028 STFAYDDLGRRTGRTTPSGAISTWTYDAAGRRTSLTSSGRTLTFEHDAMGQELVRRVGAD 1087 Query: 221 IHLYHC-DHRGLPLALVSTE 239 I L + D G L + Sbjct: 1088 ITLRNTFDVMG---RLTDEQ 1104 >UniRef50_B5H9Z7 Rhs protein n=2 Tax=Streptomyces RepID=B5H9Z7_STRPR Length = 1054 Score = 195 bits (494), Expect = 4e-48, Method: Composition-based stats. Identities = 91/351 (25%), Positives = 126/351 (35%), Gaps = 59/351 (16%) Query: 3 PDNRIARDAHYLYRYDRH---------GRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRL 53 +R + Y YR D H GR + T + + RY YD Sbjct: 523 AGDRTLQHRTYTYRADGHLTSVDDQLGGRRRLELTREGRVTGVTAENWSERYAYDEAGNQ 582 Query: 54 VHYTRTQYAEP-------------LVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKP 100 + + RY +D GR V ++ R LSRKP Sbjct: 583 TTASSPGGGDTDGPREYVGTRITRAGRVRYEHDAQGRVVLRQKAR----------LSRKP 632 Query: 101 QVTWYGWDG-DRLTTIQN-DRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQ 158 YGWD D L ++ D TR + +Y A G QR S Sbjct: 633 DTWHYGWDAEDHLVSVTTPDGTRWRYVYD------------ALGRRIAKQRLSA------ 674 Query: 159 SGGEDGGSVVFPPVLVQMLDRL--ESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYT 216 D +V D L ++ L + W V Q++ ++ Sbjct: 675 ----DATTVAEEVTFTWDGDTLCEQTTSLTGSADSVALTWDHDGVKPVTQVERRLLDRSE 730 Query: 217 PARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQYDE 276 R+ D G P LV +G W WG + +R PGQ +D Sbjct: 731 VDRRFFAIVTDLVGTPRELVDEQGKVAWRTRATLWGTTTWNRSATAYT-PLRFPGQYFDP 789 Query: 277 ESGLYYNRHRYYDPLQGRYITQDPIGLKGGWNFYQYPLNPVQYIDSMGLAS 327 ESGL+YNRHR+YDP GRY++ DP+GL N Y NP ++ID +GLA Sbjct: 790 ESGLHYNRHRHYDPESGRYLSPDPLGLVPAPNAVTYVDNPTRWIDPLGLAG 840 Score = 63.7 bits (153), Expect = 1e-08, Method: Composition-based stats. Identities = 57/291 (19%), Positives = 85/291 (29%), Gaps = 63/291 (21%) Query: 14 LYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYLYD 73 Y YD G L + R R+ YD+ R+ +T + RY+YD Sbjct: 2 RYGYDARGNL---------DAVINSSGRPLRFTYDADARITSWTDRNDS----TFRYVYD 48 Query: 74 PLGRRV---------------------------------AKRVWRRERDLTGWMSLSRKP 100 GR V A +V+ L Sbjct: 49 SAGRVVRTIGPDGYLSSTFVHDVHGETGAPITRYTNSVGATKVFHFNDHLQVVAETDPLG 108 Query: 101 QVTWYGWD-GDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQS 159 T +D DRL + + D T Y L RV+ G A T + + L Sbjct: 109 NTTHQTFDRYDRLLS-RTDALGRTTAYTYDDRGNLTRVDHPDG-TAATVEYNELNQLASV 166 Query: 160 GGEDGGSVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPAR 219 G DG + Q D + L R + + R + + + + + Sbjct: 167 TGPDGSTS------RQEYDERGNPTLFTRPNGSTTRLTHGPRGQLTGVDDSLGALDR--- 217 Query: 220 KIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRLP 270 HCD GLPLA+ GA D +G +P + Sbjct: 218 ----VHCDAAGLPLAVRGPLGAVT-RYTRDAFGRATRITDPQGRTTELEWT 263 Score = 54.8 bits (130), Expect = 8e-06, Method: Composition-based stats. Identities = 47/320 (14%), Positives = 79/320 (24%), Gaps = 64/320 (20%) Query: 9 RDAHYLYRYDRHGRLTEKTDLIPEGV-----------IRTDDERTHRYHYDSQHRLVHYT 57 Y +D GRL+ +T+ + + V + D R+ YD L Sbjct: 359 DGRTLTYAHDAMGRLSARTNGLGQTVRYERDSAGRVITKDADGAVTRFTYDIHGHLASAV 418 Query: 58 RTQYAEPLVESRYL---------------YDPLGRRVAKR-------VWRRERDLTGWMS 95 V YD GRR+ + W DL ++ Sbjct: 419 SPDVQLSFVRDSSGRILREICNGRELANVYDETGRRLRRTTPSGAVSTWSFPADLHAELN 478 Query: 96 LSRKPQVTWYGWDG------------------------DRLTTIQNDRTRIQTIYQPGSF 131 S P V + G D+ DRT Y + Sbjct: 479 ASGHPVVFEFDESGRESTRRIGDTLAIEHAYDAGGRLTDQRVRGAGDRTLQHRTYTYRAD 538 Query: 132 TPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSE 191 L V+ G + + + + Q D E Sbjct: 539 GHLTSVDDQLGGRRRLELTREGRVTGVTAENWSERYAYDEAGNQTTASSPGGGDTDGPRE 598 Query: 192 ESRRWLASCGLTVEQMQNQMDPVYTPARKI------HLYHCDHRGLPLALVSTEGATEWC 245 + G + Q V ++ Y D +++ + +G T W Sbjct: 599 YVGTRITRAGRVRYEHDAQGRVVLRQKARLSRKPDTWHYGWDAEDHLVSVTTPDG-TRWR 657 Query: 246 AEYDEWGNLLNEENPHQLQQ 265 YD G + ++ Sbjct: 658 YVYDALGRRIAKQRLSADAT 677 Score = 47.1 bits (110), Expect = 0.001, Method: Composition-based stats. Identities = 49/295 (16%), Positives = 81/295 (27%), Gaps = 54/295 (18%) Query: 9 RDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVES 68 A + + +D RL TD T Y YDS RL T Sbjct: 317 DGARHEFAHDTELRLAAVTD---------PQGLTWSYEYDSAGRLTSETDFDG----RTL 363 Query: 69 RYLYDPLGRRVAKRVWRRERDLTGWMSLSR------KPQVTWYGWD-GDRLTTIQNDRTR 121 Y +D +GR A+ + S R VT + +D L + + + Sbjct: 364 TYAHDAMGRLSARTNGLGQTVRYERDSAGRVITKDADGAVTRFTYDIHGHLASAVSPDVQ 423 Query: 122 IQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLE 181 + + S ++R ELA + + + + FP L L+ Sbjct: 424 LSFVRD--SSGRILREICNGRELANVYDETGRRLRRTTPSGAVSTWSFPADLHAELNASG 481 Query: 182 SEIL--ADRVSEESRRWL---------ASCGLTVEQMQNQMDPVYTPARKIHLYHCDHR- 229 ++ D ES R + G + + + T + + Y D Sbjct: 482 HPVVFEFDESGRESTRRIGDTLAIEHAYDAGGRLTDQRVRGAGDRTLQHRTYTYRADGHL 541 Query: 230 ------------------GLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQL 266 G + + YDE GN +P Sbjct: 542 TSVDDQLGGRRRLELTREGRVTGVTAE--NWSERYAYDEAGNQTTASSPGGGDTD 594 >UniRef50_B1KGR6 YD repeat protein n=1 Tax=Shewanella woodyi ATCC 51908 RepID=B1KGR6_SHEWM Length = 1699 Score = 194 bits (493), Expect = 5e-48, Method: Composition-based stats. Identities = 81/332 (24%), Positives = 120/332 (36%), Gaps = 69/332 (20%) Query: 5 NRIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEP 64 R+ + YRYD +GR EK +T Y +D + +L+ Sbjct: 1304 GRVETVGDHTYRYDANGRAVEKCTRKAG-----FRPQTTFYQWDEEDQLIQVRLANGD-- 1356 Query: 65 LVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQN---DRT- 120 Y YDP GRR+AK + T L P Y WDG+ L Q D T Sbjct: 1357 --CWHYQYDPFGRRIAK-----IKQSTKEQELRNTPSQFRYLWDGNNLVEQQKCYADGTL 1409 Query: 121 --RIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLD 178 Q +Y+P SF PL ++ G+ ++ +LA L + G+ Sbjct: 1410 AHTTQWVYEPNSFRPLAQLTQNHGQNSQETADNLASELHYIVTDQAGTP----------- 1458 Query: 179 RLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVST 238 W L E + ++ K + Sbjct: 1459 ------RELCTENGDIEWRGEQSLWGEHHKWRLSVQAKSKHKKY---------------- 1496 Query: 239 EGATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEESGLYYNRHRYYDPLQGRYITQ 298 L + + +R GQ +D E+GLYYNRHRYYDP +Y++ Sbjct: 1497 ----------------LEDAANDPVNCDLRYQGQVFDSETGLYYNRHRYYDPETCQYLSP 1540 Query: 299 DPIGLKGGWNFYQYPLNPVQYIDSMGLASKYG 330 DPIG+ GG Y NP++++D GLA+ Sbjct: 1541 DPIGMAGGLRTQAYVHNPMEWVDPFGLAACPT 1572 Score = 57.9 bits (138), Expect = 7e-07, Method: Composition-based stats. Identities = 49/289 (16%), Positives = 90/289 (31%), Gaps = 50/289 (17%) Query: 11 AHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRY 70 A + Y YD G LT +D + + Y Y S ++ + A ++ Y Sbjct: 782 ATWKYEYDVQGNLTCMSDPL---------NQQWFYQYTSLGQVAWVISPEGA----QTGY 828 Query: 71 LYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQPGS 130 Y+ G+ E+ + + L R T + + +R R+Q + GS Sbjct: 829 QYNDSGQLTEILPPLGEKLMLDYDVLGRLSTQTRVSSEASVGEGVAAERKRVQRWHYQGS 888 Query: 131 FTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPP-VLVQMLDRLESEILADRV 189 P R T + + + G + +ML L+ + Sbjct: 889 L-PYPRAITHEDGTQSVYDYDIEGNVTRFTDALGHQFHYEYGAFDKMLASLDPQG----- 942 Query: 190 SEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWCAEYD 249 ++ R+ C Q + V ++ YH +T G YD Sbjct: 943 AKTQYRYNGEC---------QFEGVINSQQQEWCYH----------YNTSGQIIEERHYD 983 Query: 250 EWGNLLNEENPHQLQQLIRLPGQQYDEESGLYYNRHRYYDPLQGRYITQ 298 G + + R+ + + + L+Y YD GR + Sbjct: 984 --GRITK----FTYEGAGRISSKTAADGTSLHYF----YD-AVGRLTQK 1021 Score = 56.0 bits (133), Expect = 3e-06, Method: Composition-based stats. Identities = 47/258 (18%), Positives = 74/258 (28%), Gaps = 37/258 (14%) Query: 8 ARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVE 67 A Y YD GRLT+K + I + YD +L+ + L+E Sbjct: 1003 ADGTSLHYFYDAVGRLTQKQSRDLDARI----TGNTYFEYDEASQLLKA---ENDHALIE 1055 Query: 68 SRYLYDPLGRRVAKR---------------VWRRERDLTGWMSLSRKPQVTWYGWDGDRL 112 + YD LGRR+ ++ R ER+ T S + W +L Sbjct: 1056 --FEYDELGRRITEQLNGHRVSSQYTNTGLRSRIERENTEGESYHPAADAIEFNWQLGQL 1113 Query: 113 TTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPV 172 +Q G++ PL G+ K QQ G G ++ + Sbjct: 1114 KGLQI-----------GAYHPLAFSHNQLGQETKRSNGLGFHLAQQHG--PDGLLLNQQL 1160 Query: 173 LVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLP 232 + + A Q Y +I H GL Sbjct: 1161 IPSAHHAESLMGEGSEPFNNVHQATARGKGDSRYQHLQRSYQYNALNQISQIDDSHWGLS 1220 Query: 233 LALVSTEGATEWCAEYDE 250 ++ G +Y Sbjct: 1221 EFEHNSVGQITQHKQYAP 1238 Score = 51.7 bits (122), Expect = 7e-05, Method: Composition-based stats. Identities = 25/121 (20%), Positives = 44/121 (36%), Gaps = 23/121 (19%) Query: 9 RDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVES 68 + + Y Y+ G++ E R D R ++ Y+ R+ T Sbjct: 962 QQQEWCYHYNTSGQIIE---------ERHYDGRITKFTYEGAGRISSKTAADGTS----L 1008 Query: 69 RYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWD-GDRLTTIQNDRTRIQTIYQ 127 Y YD +GR K+ + +TG T++ +D +L +ND I+ Y Sbjct: 1009 HYFYDAVGRLTQKQSRDLDARITGN---------TYFEYDEASQLLKAENDHALIEFEYD 1059 Query: 128 P 128 Sbjct: 1060 E 1060 Score = 49.8 bits (117), Expect = 2e-04, Method: Composition-based stats. Identities = 54/340 (15%), Positives = 93/340 (27%), Gaps = 71/340 (20%) Query: 17 YDRHGRLTEKT--DLIPEGVIRTDDERT-----------HRYHYDSQHRLVHYTRTQYAE 63 YD GR + IR DD +Y++D ++ +V E Sbjct: 662 YDDKGRAIASRGAEGRFSDQIRFDDANRIVYYKSAIDGIQQYYHDERNNIVRIIFPNGDE 721 Query: 64 PLVESRY-----LYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGD-RLTTIQN 117 E + LG R + + ++ VT Y +D + RL N Sbjct: 722 IHNEWLDNQLVAQSNALGERTE---FSYDAWGQVEQVIAADGSVTSYQYDDNGRLIGHIN 778 Query: 118 DRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQ---QSGGEDGGSVVFPPVLV 174 Y+ L + + Q SL G + G L Sbjct: 779 PLGA-TWKYEYDVQGNLTCMSDPLNQQWFYQYTSLGQVAWVISPEGAQTGYQYNDSGQLT 837 Query: 175 QMLDRLESEILAD------------------------RVSEESRRWLASCGLTVEQMQNQ 210 ++L L +++ D + +RW L + Sbjct: 838 EILPPLGEKLMLDYDVLGRLSTQTRVSSEASVGEGVAAERKRVQRWHYQGSLPYPRAITH 897 Query: 211 MDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRLP 270 D + ++ Y D G G EY + +L +P + R Sbjct: 898 EDG----TQSVYDY--DIEGNVTRFTDALGHQF-HYEYGAFDKMLASLDPQGAKTQYRYN 950 Query: 271 GQ--------QYDEESGLYYNRH------RYYDPLQGRYI 296 G+ +E +YN R+YD ++ Sbjct: 951 GECQFEGVINSQQQEWCYHYNTSGQIIEERHYDGRITKFT 990 Score = 48.3 bits (113), Expect = 6e-04, Method: Composition-based stats. Identities = 42/262 (16%), Positives = 78/262 (29%), Gaps = 44/262 (16%) Query: 14 LYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYLYD 73 Y YDRHG++ R + Y Y + L+ ++ ++ VE YD Sbjct: 617 RYEYDRHGQMLS---------CRAAPGCSFDYQYSEEGYLLRWS--DLSQTWVEH--DYD 663 Query: 74 PLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQPGSFTP 133 GR +A R + R + D +R+ ++ IQ Y Sbjct: 664 DKGRAIASR-----------GAEGRFSDQIRFD-DANRIVYYKSAIDGIQQ-YYHDERNN 710 Query: 134 LIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSEES 193 ++R+ G+ + L ++ +++A S S Sbjct: 711 IVRIIFPNGDEIHNEW------LDNQLVAQSNALGERTEFSYDAWGQVEQVIAADGSVTS 764 Query: 194 RRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGN 253 ++ + L P Y D +G + +W +Y G Sbjct: 765 YQYDDNGRLI---------GHINPLGATWKYEYDVQGNLTCMSDPL-NQQWFYQYTSLGQ 814 Query: 254 LLNEENPHQLQQLIRL--PGQQ 273 + +P Q + GQ Sbjct: 815 VAWVISPEGAQTGYQYNDSGQL 836 >UniRef50_Q3JSF4 RhsD protein n=23 Tax=Burkholderia pseudomallei RepID=Q3JSF4_BURP1 Length = 1593 Score = 194 bits (492), Expect = 7e-48, Method: Composition-based stats. Identities = 84/345 (24%), Positives = 125/345 (36%), Gaps = 36/345 (10%) Query: 6 RIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQY---- 61 R Y YDR G L K + +R +D+ +LV + Sbjct: 1127 REGEYDGCYYAYDRVGNLIRKLGADEDLTLR----------WDAAGQLVETVSLRPVLAK 1176 Query: 62 -AEPLVESR--YLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVT---WYGWDGDRLTTI 115 A V R Y YD RRV K V ++ +L T Y WD D L Sbjct: 1177 DAGHRVRIRAVYEYDAFQRRVRKVVDVKQDRHESPETLENASAPTHICRYFWDADTLIAE 1236 Query: 116 QNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQ 175 Y + PL+ + A T +++ + V +P Sbjct: 1237 ----------YGHDAEDPLLFLGDADASARPTLLHRDCVAVERPFRGNREWVYYPRTFQV 1286 Query: 176 M-----LDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRG 230 + D + +S + A G + + + + D G Sbjct: 1287 LAVALCCDPHRDDPNLASISANNVTGSAPLGAADAALSLIPAVPTLSGNRTYFFENDLNG 1346 Query: 231 LPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEESGLYYNRHRYYDP 290 P+ + G W A Y G + + E +QQ IRL GQ +D ESGL YNR+RY+ Sbjct: 1347 APVRIYDDCGRIVWEARYGPHGGIASIE-TDVIQQPIRLQGQIFDWESGLSYNRYRYFLS 1405 Query: 291 LQGRYITQDPIGLKGGWNFYQYPLNPVQYIDSMGLASKYGHLNNG 335 G +++QDPIGL GG N Y++ N + D +GL + NG Sbjct: 1406 SIGAFVSQDPIGLVGGVNLYRFAPNAFGWTDPLGLKKRKRKFVNG 1450 Score = 66.7 bits (161), Expect = 2e-09, Method: Composition-based stats. Identities = 49/297 (16%), Positives = 90/297 (30%), Gaps = 56/297 (18%) Query: 3 PDNRIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDD------------ERTHRYHYDSQ 50 P R+ + YD +G L +T V + R +Y +D + Sbjct: 630 PAGRVT-----TWEYDAYGNLLAQTLPDGSAVRAEYNADHKPVQVTDTSGRQRQYAWDER 684 Query: 51 HRLVHYTRTQYAEPLVESRYLYDPLGRRVAKR-----VWRRERDLTGWMS--LSRKPQVT 103 + L+ Q + S+Y YD G+ V+ V R D G ++ ++ T Sbjct: 685 NNLLG----QISPTQASSQYGYDAHGQVVSHTGPCGAVTRFLYDHDGNLAEIVNALGHCT 740 Query: 104 WYGWDGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGED 163 Y +D + Y+ L R GE + L + + Sbjct: 741 RYTYDARANVIETVSALGQVSRYEYDRNGNLTRA-IEPGEREISCSYDADGNLVRYRDPN 799 Query: 164 GGSVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQ--MDPVYTPARKI 221 G + + ++R L G+ + + + V ++ Sbjct: 800 GHVTQLEYSPLSQI---------------TKRLLPGGGVVEYRYDTEERLVGVVNERGEL 844 Query: 222 HLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEES 278 +L + G + V G EY G++ +P GQ D E+ Sbjct: 845 YLLKRNAVGQIVEEVDYWGQLR-RYEYSARGDVQRSIDPL---------GQSIDYET 891 Score = 64.8 bits (156), Expect = 7e-09, Method: Composition-based stats. Identities = 49/267 (18%), Positives = 81/267 (30%), Gaps = 28/267 (10%) Query: 11 AHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRY 70 Y DR GR+ +K R D R R+ YD LV P Sbjct: 885 QSIDYETDRLGRIVQKRIPDLR---RPDRMRVERFEYDRGGNLVIAE-----SPDSRVEL 936 Query: 71 LYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQPGS 130 YD GR V +R T + + + + RL + + Y + Sbjct: 937 SYDAAGRVVEERQGDEFVIATAYDAAGNRIKR------QTRL-NARGEIVTHTVRYGYDA 989 Query: 131 FTPLIRVETATGELAKTQRRSLAD-TLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRV 189 + ++ +R +L ++ G E + + + L S Sbjct: 990 LDAVTSIQVDDAAPITFERDALGQIRVEHLGTELRRELSYTSEGLLAKQTLFSGTSPLFA 1049 Query: 190 SEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWCAEYD 249 SE + + G +E++ +++ P Y D G + G YD Sbjct: 1050 SEYA---YDANGELLEKIDSRLGPER--------YQYDPMGRLTRHLDPAGKLH-RFLYD 1097 Query: 250 EWGNLLNEENPHQLQQLIRLPGQQYDE 276 G+LL Q + G Q D Sbjct: 1098 PVGDLLTTRVGLVHQTSMSGQGPQADP 1124 Score = 54.0 bits (128), Expect = 1e-05, Method: Composition-based stats. Identities = 54/345 (15%), Positives = 92/345 (26%), Gaps = 63/345 (18%) Query: 12 HYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYL 71 Y + YD R T TD + I +ER + Y Sbjct: 571 DYRFVYDIERRETRITDSLGHSTILQANER-------------GMPVARINPLGGVWSYR 617 Query: 72 YDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQ-PGS 130 YD GR + + + Y G+ L D + ++ Y Sbjct: 618 YDAQGR------------ASAETDPAGRVTTWEYDAYGNLLAQTLPDGSAVRAEYNADHK 665 Query: 131 FTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEIL----A 186 + + A +R +L + + +V + Sbjct: 666 PVQVTDTSGRQRQYAWDERNNLLGQISPTQASSQYGYDAHGQVVSHTGPCGAVTRFLYDH 725 Query: 187 DRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWCA 246 D E L C + + + ++ Y D G + G E Sbjct: 726 DGNLAEIVNALGHCTRYTYDARANVIETVSALGQVSRYEYDRNGNLTRAIEP-GEREISC 784 Query: 247 EYDEWGNLLNEENPHQLQQLIRL-----------PG-----QQYDE---------ESGLY 281 YD GNL+ +P+ + PG +YD E G Sbjct: 785 SYDADGNLVRYRDPNGHVTQLEYSPLSQITKRLLPGGGVVEYRYDTEERLVGVVNERGEL 844 Query: 282 YNRHRYYDPLQGRYITQDPIGLKGGWNFYQYP--LNPVQYIDSMG 324 Y R G+ + + + G Y+Y + + ID +G Sbjct: 845 YLLKRN---AVGQIVEE--VDYWGQLRRYEYSARGDVQRSIDPLG 884 Score = 48.6 bits (114), Expect = 5e-04, Method: Composition-based stats. Identities = 50/337 (14%), Positives = 96/337 (28%), Gaps = 83/337 (24%) Query: 14 LYRYDRHGRLTEKTDLIPEGV------------IRTDDERTHR----------------- 44 Y YDR+G LT + + R + + Sbjct: 762 RYEYDRNGNLTRAIEPGEREISCSYDADGNLVRYRDPNGHVTQLEYSPLSQITKRLLPGG 821 Query: 45 ----YHYDSQHRLVHYTRTQY---------AEPLVES--------RYLY----------D 73 Y YD++ RLV + +VE RY Y D Sbjct: 822 GVVEYRYDTEERLVGVVNERGELYLLKRNAVGQIVEEVDYWGQLRRYEYSARGDVQRSID 881 Query: 74 PLGRRVAKRVWRRERDLTGWMSLSRKP---QVTWYGWD-GDRLTTIQNDRTRIQTIYQPG 129 PLG+ + R R + + R+P +V + +D G L ++ +R++ Y Sbjct: 882 PLGQSIDYETDRLGRIVQKRIPDLRRPDRMRVERFEYDRGGNLVIAESPDSRVELSYDAA 941 Query: 130 SFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLE--SEILAD 187 ++ + T + + +++ + + + D L+ + I D Sbjct: 942 --GRVVEERQGDEFVIATAYDAAGNRIKRQTRLNARGEIVTHTVRYGYDALDAVTSIQVD 999 Query: 188 RVSEESRRWLASCGLTVEQMQNQM--DPVYTP----ARKIHLYHCDHRGLPLALVSTEGA 241 + + A + VE + ++ + YT A++ G Sbjct: 1000 DAAPITFERDALGQIRVEHLGTELRRELSYTSEGLLAKQTLFSGTSPLFASEYAYDANGE 1059 Query: 242 TE---------WCAEYDEWGNLLNEENPHQLQQLIRL 269 +YD G L +P Sbjct: 1060 LLEKIDSRLGPERYQYDPMGRLTRHLDPAGKLHRFLY 1096 Score = 45.2 bits (105), Expect = 0.005, Method: Composition-based stats. Identities = 42/225 (18%), Positives = 65/225 (28%), Gaps = 36/225 (16%) Query: 3 PDNRIAR-----------DAHYLYRYDRHGRLT------------EKTDLIPEGVIRTDD 39 NRI R Y YD +T E+ L V Sbjct: 962 AGNRIKRQTRLNARGEIVTHTVRYGYDALDAVTSIQVDDAAPITFERDALGQIRVEHLGT 1021 Query: 40 ERTHRYHYDSQHRLVHYTRTQYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRK 99 E Y S+ L T PL S Y YD G + K R + + + R Sbjct: 1022 ELRRELSYTSEGLLAKQTLFSGTSPLFASEYAYDANGELLEKIDSRLGPERYQYDPMGRL 1081 Query: 100 PQ---------VTWYGWDGDRLTT-IQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQR 149 + Y GD LTT + + P + P IR G R Sbjct: 1082 TRHLDPAGKLHRFLYDPVGDLLTTRVGLVHQTSMSGQGPQA-DPWIREGEYDGCYYAYDR 1140 Query: 150 RSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSEESR 194 + + +++ G ++ ++ + + +LA R Sbjct: 1141 --VGNLIRKLGADEDLTLRWDAAGQLVETVSLRPVLAKDAGHRVR 1183 >UniRef50_C5ALM7 YD repeat protein n=19 Tax=Proteobacteria RepID=C5ALM7_BURGB Length = 1425 Score = 193 bits (491), Expect = 1e-47, Method: Composition-based stats. Identities = 79/331 (23%), Positives = 124/331 (37%), Gaps = 42/331 (12%) Query: 11 AHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAE------- 63 + YD G LT++ + T D + + +D+ L+ + + Sbjct: 992 GSTQFSYDPAGYLTQR--------VNTADRQLESFAWDAAGNLLDDAQRRSRGYVEGNRL 1043 Query: 64 -PLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDG-DRLTTIQNDRTR 121 R+ YDP G K L Q + +DG DRL ++ R Sbjct: 1044 RMWQNLRFEYDPFGNLATK--------------LRGANQRQQFTYDGQDRLVAVRTQDAR 1089 Query: 122 IQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLE 181 + ++ PL R T + D + E+ V+ + + R Sbjct: 1090 GVVETRF-AYDPLGRRIAKTDI--------VRDARGVALREETKRFVWEGLRLAQEVRDT 1140 Query: 182 SEILADRVSEESRRWLA-SCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEG 240 + A + E M A +I+ +H D G P + G Sbjct: 1141 GVSSYVYSPDAPYTPAARVDAVLAEAMAAAAIEQARQATRIYHFHTDVSGAPQEATNEAG 1200 Query: 241 ATEWCAEYDEWGNLLNEEN-PHQLQQLIRLPGQQYDEESGLYYNRHRYYDPLQGRYITQD 299 W +Y WG + ++ P ++ Q +R GQ D+ + L+YN R+YDP GR+I QD Sbjct: 1201 DIVWAGQYSAWGKVAPNQHAPARIDQPLRYAGQYADDSTELHYNTFRFYDPDVGRFINQD 1260 Query: 300 PIGLKGGWNFYQYPLNPVQYIDSMGLASKYG 330 PIGL GG N YQY N + + D GLA Y Sbjct: 1261 PIGLMGGLNLYQYAPNSIAWTDWWGLAGSYT 1291 Score = 54.4 bits (129), Expect = 1e-05, Method: Composition-based stats. Identities = 50/283 (17%), Positives = 76/283 (26%), Gaps = 69/283 (24%) Query: 12 HYLYRYDRHGRLTEKTDLIPEGV-------------IRTDDERTHRYHYDSQHRLVHYTR 58 + YD GR+ +TD + I D YD Q RL+ Sbjct: 543 TVTFEYDDAGRIVAETDPLGRTTKTRYDGNSRRPVEIIAPDGSAWHAEYDRQGRLLATRD 602 Query: 59 TQYAEPLVESRYLY------------DPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYG 106 E RY Y D LG R W R +L + S K +Y Sbjct: 603 PLDREN----RYEYPKALSALPIAHVDALGGRKT-FEWNRLGELVAYTDCSGKTTRNFYD 657 Query: 107 WDGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGS 166 G L R+ +P T R T ++ A + + G G + Sbjct: 658 AFGLPLARENALGHRVTFDLRP---TGEARRVTYPDGSTESYEYDAAGLMIRHVGLGGRT 714 Query: 167 VVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHC 226 + + + Q+ PA + Y Sbjct: 715 QI----------------------------------ALRNARGQIVEAVDPAGRRTCYRY 740 Query: 227 DHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRL 269 D G L +G + Y G L +E P +++ Sbjct: 741 DAEGRLREL--QQGHARYAFTYSAGGRLTSETRPDGVRRRFEY 781 Score = 52.1 bits (123), Expect = 5e-05, Method: Composition-based stats. Identities = 51/272 (18%), Positives = 79/272 (29%), Gaps = 20/272 (7%) Query: 15 YRYDRHGRLTEKTDLIPEGVIR--TDDERTHR----------YHYDSQHRLVHYTRTQYA 62 Y YD HG++ TD V R D R Y + + T + Sbjct: 417 YGYDEHGQMASVTDANGALVRRFTYADGRMTSHSNALGFTSGYTWQAVGGAPRVVATHTS 476 Query: 63 EPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRI 122 E + YD GRR V + W ++ V + +DG R ND Sbjct: 477 EGEA-WAFEYDIEGRRT--HVRHADGRHAQWRYDAQFQIVEYLDFDGRRYGLKYNDAGMP 533 Query: 123 QTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLES 182 + PG T + A +A+T + G + P + Sbjct: 534 VMLTLPGERTVTFEYDDAGRIVAETDPLGRTTKTRYDGNSRRPVEIIAPDGSAWHAEYDR 593 Query: 183 EILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGAT 242 + + R RK + + G +A G T Sbjct: 594 QGRLLATRDPLDRENRYEYPKALSALPIAHVDALGGRKT--FEWNRLGELVAYTDCSGKT 651 Query: 243 EWCAEYDEWGNLLNEENP--HQLQQLIRLPGQ 272 YD +G L EN H++ +R G+ Sbjct: 652 T-RNFYDAFGLPLARENALGHRVTFDLRPTGE 682 Score = 51.7 bits (122), Expect = 5e-05, Method: Composition-based stats. Identities = 52/293 (17%), Positives = 80/293 (27%), Gaps = 37/293 (12%) Query: 6 RIARDAHYLYRYDRHGRLTEKTDLIPEG------------VIRTDDERTHRYHYDSQHRL 53 R A H +RYD ++ E D ++ ERT + YD R+ Sbjct: 495 RHADGRHAQWRYDAQFQIVEYLDFDGRRYGLKYNDAGMPVMLTLPGERTVTFEYDDAGRI 554 Query: 54 VHYTRTQYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLT 113 V T DPLGR R R ++ Y G L Sbjct: 555 VAET---------------DPLGRTTKTRYDGNSRRPVEIIAPDGSAWHAEYDRQGRLLA 599 Query: 114 TIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVL 173 T + Y P + + L KT + L G + Sbjct: 600 TRDPLDRENRYEY-PKALSALPIAHVDALGGRKTFEWNRLGELVAYTDCSGKTTRNFYDA 658 Query: 174 VQMLDRLESEILADRVSE-----ESRRWLASCGLTVEQMQNQMDPVYTP---ARKIHLYH 225 + E+ + + E+RR G T + + + + Sbjct: 659 FGLPLARENALGHRVTFDLRPTGEARRVTYPDGSTESYEYDAAGLMIRHVGLGGRTQIAL 718 Query: 226 CDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEES 278 + RG + V G C YD G L + H G + E+ Sbjct: 719 RNARGQIVEAVDPAGRRT-CYRYDAEGRLRELQQGHARYAFTYSAGGRLTSET 770 Score = 48.3 bits (113), Expect = 6e-04, Method: Composition-based stats. Identities = 49/282 (17%), Positives = 80/282 (28%), Gaps = 45/282 (15%) Query: 8 ARDAHYLYRYDRHGRLTEKTDLIPEGVIRTD-DERTHRYHYDSQHRLVHYTRTQYAEPLV 66 Y D GRL E + + T + YD RL + Sbjct: 824 TPTEVTRYTRDTGGRLLEVACVPTAAGLALGIAPDTLTFEYDKAGRL-----SAEHGANG 878 Query: 67 ESRYLYDPLGRRV-----AKRVWRRERDLTGWMSLSRKPQVTWYGWDGD----------- 110 RY D L + ++ + R +G + R ++ D Sbjct: 879 SVRYTLDALDNVMKLALPHEQTLQMLRYGSGHVHQIRCGDQVVSDFERDDLHRELTRTQG 938 Query: 111 RLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFP 170 RLT + I+Q F P + G++ + A L +S GS F Sbjct: 939 RLTERTAYDLLGRKIWQSAGFQPDA-LARGQGQVWRNYGYDAAGELAESHDSLRGSTQFS 997 Query: 171 PVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRG 230 L + + ES W A+ L + + Y ++ ++ Sbjct: 998 YDPAGYLTQRVNTADRQL---ESFAWDAAGNLLDDAQRRSRG--YVEGNRLRMWQN---- 1048 Query: 231 LPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQ 272 EYD +GNL + +Q GQ Sbjct: 1049 -------------LRFEYDPFGNLATKLRGANQRQQFTYDGQ 1077 Score = 42.5 bits (98), Expect = 0.039, Method: Composition-based stats. Identities = 42/269 (15%), Positives = 78/269 (28%), Gaps = 36/269 (13%) Query: 14 LYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQH-RLVHYTRTQYAEPLVESRYLY 72 + D GR+ E I+T Y+ +H RL + + + Y Y Sbjct: 369 QFERDSRGRVRE---------IQTCGGLLAVLDYEPEHGRLAGVSLVSGDQRRLVVAYGY 419 Query: 73 ----------DPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRI 122 D G V + + R + +L TW G + Sbjct: 420 DEHGQMASVTDANGALVRRFTYADGRMTSHSNALGFTSGYTWQAVGGAPRVVATHTSEGE 479 Query: 123 QTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLES 182 ++ V A G R + + DG + Sbjct: 480 AWAFEYDIEGRRTHVRHADG-RHAQWRYDAQFQIVEYLDFDGRRYGLKY------NDAGM 532 Query: 183 EILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRG-LPLALVSTEGA 241 ++ E + + ++ + DP+ + + D P+ +++ +G+ Sbjct: 533 PVMLTLPGERTVTFEYDDAG---RIVAETDPLGRTTKTRY----DGNSRRPVEIIAPDGS 585 Query: 242 TEWCAEYDEWGNLLNEENPHQLQQLIRLP 270 W AEYD G LL +P + P Sbjct: 586 -AWHAEYDRQGRLLATRDPLDRENRYEYP 613 >UniRef50_C6M9F4 Rhs family protein n=8 Tax=Neisseria RepID=C6M9F4_NEISI Length = 632 Score = 193 bits (490), Expect = 1e-47, Method: Composition-based stats. Identities = 89/392 (22%), Positives = 142/392 (36%), Gaps = 42/392 (10%) Query: 14 LYRYDRHGRLTEKTDLI------PEGVIRTDDERTHR-----YHYDSQHRLVHYTRTQYA 62 Y D GRL + + +G + Y YD L H T + Sbjct: 187 RYELDPLGRLKRQIATLNDLTEGGKGKTKVAAGYGQTAVKRSYGYDRTGNLTHSTDQRTG 246 Query: 63 EPLVESRYLYDPLGRRV-----------AKRVWRRERDLTGWMSLSRKPQVTWYGWDGDR 111 + + YD LGR A + + L T+Y D Sbjct: 247 ----TTHFEYDKLGRITKAGSELFAFDPAHNILSDGLNAIPDNRLKTYNGTTYYYDDLGN 302 Query: 112 LTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPP 171 L + +Q Y L++ E + K D L + G+ Sbjct: 303 LIHRELADGEVQN-YFYDLHDQLVKAEIFKKDGTKETWFYTYDALGRRIGKGRLKNEEVS 361 Query: 172 VLVQMLDR---LESEILADRVSEESRRWLASCG---LTVEQMQNQMDPVYTPARKIHLYH 225 ++ R S +L + + ++ + + Q+++ ++ H +H Sbjct: 362 GSLENHTRFVWDGSHLLQEIHPDGRYTYIYTDPDSYEPLAQVRDWTTEDGENRQQTHYFH 421 Query: 226 CDHRGLPLALVSTEGATEWCAEYDEWGNLLNEEN-PHQLQQLIRLPGQQYDEESGLYYNR 284 CD G+P + +G W Y WG L E Q RL Q D E+GL+YN Sbjct: 422 CDQIGIPREMTDKDGNLLWFGNYTGWGRLKEETRVTDSAYQPFRLQNQYADRETGLHYNF 481 Query: 285 HRYYDPLQGRYITQDPIGLKGGWNFYQYPLNPVQYIDSMGL--ASKYGHLNNGGYGARPN 342 RYY+P GR++ QDPIGL GG N YQ+ N ++ID +GL +S+ G LN G Sbjct: 482 FRYYEPDAGRFVNQDPIGLLGGANPYQFASNITEWIDPLGLVKSSQSGGLNWNWKGVGDR 541 Query: 343 KPPTPD------PSKLPDIAKQLRLPYPIDQA 368 + D P+K + + +++A Sbjct: 542 QAHVIDNHGSVNPNKPKQSIFKQKPVPTVNKA 573 Score = 97.6 bits (241), Expect = 9e-19, Method: Composition-based stats. Identities = 52/235 (22%), Positives = 73/235 (31%), Gaps = 25/235 (10%) Query: 3 PDNRIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYA 62 PDNR+ Y YD G L + D Y YD +LV + Sbjct: 283 PDNRLKTYNGTTYYYDDLGNLIHRE---------LADGEVQNYFYDLHDQLVKAEIFKKD 333 Query: 63 EPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRI 122 Y YD LGRR+ K + E T + WDG L + R Sbjct: 334 GTKETWFYTYDALGRRIGKGRLKNEEVS------GSLENHTRFVWDGSHLLQEIHPDGRY 387 Query: 123 QTIY-QPGSFTPLIRVE---TATGELAKTQRRSLADTL---QQSGGEDGGSVVFPPVLVQ 175 IY P S+ PL +V T GE + D + ++ +DG + F Sbjct: 388 TYIYTDPDSYEPLAQVRDWTTEDGENRQQTHYFHCDQIGIPREMTDKDGNLLWFGNYTGW 447 Query: 176 MLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRG 230 RL+ E + + R + Y P + D G Sbjct: 448 --GRLKEETRVTDSAYQPFRLQNQYADRETGLHYNFFRYYEPDAG-RFVNQDPIG 499 Score = 41.3 bits (95), Expect = 0.083, Method: Composition-based stats. Identities = 42/326 (12%), Positives = 88/326 (26%), Gaps = 70/326 (21%) Query: 9 RDAHYLYRYDRHGRLTEKTDLIPEG--VIRTDDERTHRYHY-------DSQHRLVHYTRT 59 + Y+YD G L + + + ++ + ++++ L Sbjct: 50 KVQETAYQYDLDGNLVRAANCHSITCFDYNENGQLIAQHQWKVPSKEENARNGLPDTDWR 109 Query: 60 QYAEPLV------ESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLT 113 ++ RY YD G R A + + + Q++ D + +T Sbjct: 110 DAQYDMLYLPVTETVRYHYDFNGNRTATVLPDGRQINYLYYGSGHLHQISL---DDEVIT 166 Query: 114 TIQND---------RTRIQTIYQPGSFTPLIR--------VETATGELAKTQRRSLADTL 156 I+ D + ++ + Y+ L R E G+ Sbjct: 167 DIERDKLHREIYRTQGKLASRYELDPLGRLKRQIATLNDLTEGGKGKTKVAAGYGQTAVK 226 Query: 157 QQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYT 216 + G + G++ E + L S + + + + ++ + Sbjct: 227 RSYGYDRTGNLTHSTDQRTGTTHFEYDKLGRITKAGSELFAFDPAHNI--LSDGLNAIPD 284 Query: 217 PARKIH---LYHCDHRGLPLALVSTEGAT------------------------EWCAEYD 249 K + Y+ D G + +G W YD Sbjct: 285 NRLKTYNGTTYYYDDLGNLIHRELADGEVQNYFYDLHDQLVKAEIFKKDGTKETWFYTYD 344 Query: 250 EWGNLL------NEENPHQLQQLIRL 269 G + NEE L+ R Sbjct: 345 ALGRRIGKGRLKNEEVSGSLENHTRF 370 >UniRef50_A8ZSG6 YD repeat protein n=1 Tax=Desulfococcus oleovorans Hxd3 RepID=A8ZSG6_DESOH Length = 423 Score = 192 bits (488), Expect = 2e-47, Method: Composition-based stats. Identities = 88/329 (26%), Positives = 128/329 (38%), Gaps = 35/329 (10%) Query: 12 HYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYL 71 +Y Y +D +T K + Y YD HRL T A L + + Sbjct: 55 NYTYAHDAMDNITAKQTEHGDYG----------YGYDDLHRL--ATVDNPAAGLADEAFT 102 Query: 72 YDPLGRRVAKRVWRRERDLTGWMSLSRKPQVT---WYGWDGDRLTTIQNDRTRIQTIYQP 128 YD +G R+ + L VT Y +D + T + + + Y Sbjct: 103 YDSVGNRLTSAQAAGDWTYNDNNELLSSVGVTGGSTYEYDANGNTIKKTVGGVVTS-YVY 161 Query: 129 GSFTPLIRVETA---TGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEIL 185 + L +V + +G L T G + + L +EI Sbjct: 162 NTEDRLTQVWSGLPGSGSLTATYYYDPFGRRLWKGVGGTRTYFHYSD-----EGLVAEIN 216 Query: 186 ADRVSEESRRWLASCGLTVEQMQNQMDPVYTP-ARKIHLYHCDHRGLPLALVSTEGATEW 244 A +S W DP++ + + YH DH G P L ++ GA W Sbjct: 217 ASGTVVKSYGWQPGG-------TWGTDPLFMKVSGNYYFYHNDHLGTPQKLTASNGAVVW 269 Query: 245 CAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEESGLYYNRHRYYDPLQGRYITQDPIGLK 304 A+Y+ +G+ E ++ +R PGQ +D ESGL+YN HRYY P GR++ DPIGL+ Sbjct: 270 SAKYESFGDATVE--IETVENNLRFPGQYFDGESGLHYNLHRYYAPELGRFLKDDPIGLR 327 Query: 305 GGWNFYQYPLNPV-QYIDSMGLASKYGHL 332 GG N Y Y N V D GL SK Sbjct: 328 GGINQYIYADNNVSNNTDPYGLFSKKTKC 356 Score = 62.1 bits (149), Expect = 4e-08, Method: Composition-based stats. Identities = 23/108 (21%), Positives = 33/108 (30%), Gaps = 16/108 (14%) Query: 7 IARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLV 66 + Y YD +G +KT Y Y+++ RL + Sbjct: 131 VGVTGGSTYEYDANGNTIKKTV----------GGVVTSYVYNTEDRLTQVWSGLPGSGSL 180 Query: 67 ESRYLYDPLGRRVAKRVWRRERDLTGWMSL------SRKPQVTWYGWD 108 + Y YDP GRR+ K V + V YGW Sbjct: 181 TATYYYDPFGRRLWKGVGGTRTYFHYSDEGLVAEINASGTVVKSYGWQ 228 >UniRef50_C5AIF2 Rhs family protein n=1 Tax=Burkholderia glumae BGR1 RepID=C5AIF2_BURGB Length = 345 Score = 192 bits (488), Expect = 2e-47, Method: Composition-based stats. Identities = 76/272 (27%), Positives = 100/272 (36%), Gaps = 68/272 (25%) Query: 72 YDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQPGSF 131 YD GRR+AK V T YGWDGD L D +Y+ +F Sbjct: 19 YDAFGRRIAKEVNGA---------------RTVYGWDGDTLAYESADEHSTHYLYELETF 63 Query: 132 TPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSE 191 P+ + A +T + D Sbjct: 64 VPMAQYAGAPVNGIETPAAASTDRY----------------------------------- 88 Query: 192 ESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEW 251 T E Q P A + YHCD G PL + G W A Y W Sbjct: 89 -----------TPEDDPLQRVPAAAAAAHLVFYHCDQIGTPLMMTDEAGELVWEASYRAW 137 Query: 252 GNLLN-------EENPHQLQQLIRLPGQQYDEESGLYYNRHRYYDPLQGRYITQDPIGLK 304 G ++ +R GQQ+D+E+G +YNR+RYYDP R++ +DPIGL Sbjct: 138 GEAQEVIERASAAAGIDVVRNPLRFQGQQFDDETGQHYNRYRYYDPGSSRFVNKDPIGLT 197 Query: 305 GGWNFYQYPLNPVQYIDSMGLASKYGHLNNGG 336 GG N YQY NP+ +ID +GL GG Sbjct: 198 GGINIYQYAPNPISWIDPLGLQRTLTGTTKGG 229 >UniRef50_A7K3Q8 Rhs family protein n=7 Tax=Vibrio RepID=A7K3Q8_VIBSE Length = 1384 Score = 192 bits (487), Expect = 3e-47, Method: Composition-based stats. Identities = 87/345 (25%), Positives = 137/345 (39%), Gaps = 56/345 (16%) Query: 5 NRIARDAHYLYR----YDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQ 60 R+++ + YD GRL E+ +R +Y Y++Q+R+ Sbjct: 829 GRVSQIKTAHFNERIIYDGVGRLVEQHWP----------DREKKYVYNAQNRISSII--- 875 Query: 61 YAEPLVESRYLYDPLG--RRV--AKRVWRRERDLTGWMSLS-----------RKPQVTWY 105 + Y YD LG +RV + V + E D G +L Y Sbjct: 876 -DNTAGATHYQYDALGQLKRVNASGEVTKFEYDSFGNPTLPSSEVFADRIEVHDDVRFKY 934 Query: 106 GWDGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGG 165 G++ + + + LI V T G +++ + +L ++ + Sbjct: 935 DAQGNQTKREGQGHVQTRVF---DALNQLIEVHTDDG-ISQYEYDALGRRTKKITQQGVT 990 Query: 166 SVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYH 225 ++ E E L S + RW T + + V I+ Y Sbjct: 991 EFLW-----------EGERLIGERSSGAFRWYLYQPETYTPVALLENDV------IYWYQ 1033 Query: 226 CDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEESGLYYNRH 285 CD G P L+ EG W A YD G + ++ +R GQ +D+E+ L+YN Sbjct: 1034 CDQVGKPERLIDCEGNVVWSASYDAHG--FAHVHIEKVVNPLRFQGQYFDQETNLHYNLA 1091 Query: 286 RYYDPLQGRYITQDPIGLKGGWNFYQYPLNPVQYIDSMGLASKYG 330 RYYDP GR+I QDPI + GG N YQY +NP+Q+ID G + G Sbjct: 1092 RYYDPKLGRFIQQDPISIAGGINHYQYAINPIQWIDPTGFLCEEG 1136 Score = 58.7 bits (140), Expect = 5e-07, Method: Composition-based stats. Identities = 52/284 (18%), Positives = 92/284 (32%), Gaps = 54/284 (19%) Query: 9 RDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVES 68 +H Y YD+ LT+ + D + YD + +L ++S Sbjct: 647 DGSHISYEYDQQRNLTK---------LVRSDGLEFEFLYDDEGQLSGTVGFDN----LQS 693 Query: 69 RYLYDPLGRRVAKRVWRR----ERDLTGWMSLSRKPQ-----VTWYGWD-GDRLTTIQND 118 ++ YD +GR K+V R D G++ + + + G RLT N Sbjct: 694 QFDYDDMGRIHRKQVADRTVLYRYDAAGYLKHVKAGNGSSIVENHFNYTFGGRLTFASNR 753 Query: 119 RTRIQTIYQPGSFTPLI---------------------RVETATGELAKTQRRSLADTLQ 157 +Q YQ SF L +V EL + R + Sbjct: 754 HQTLQ--YQYSSFGHLTKRIQGQFEIAQEFNRVGQRVSQVLPDNTELNFSYDRYGRFSAI 811 Query: 158 QSGGEDGGSVVFPPVLVQMLDRLESEILADRVSEE------SRRWLASCGLTVEQMQNQM 211 + G D + F + + ++++ +R+ + + W V QN++ Sbjct: 812 RFGNLDLPQIKFHYDEMGRVSQIKTAHFNERIIYDGVGRLVEQHWPDREKKYVYNAQNRI 871 Query: 212 DPVYTPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLL 255 + Y D G + + G EYD +GN Sbjct: 872 SSIIDNTAGATHYQYDALGQLKRV-NASGEVT-KFEYDSFGNPT 913 Score = 54.0 bits (128), Expect = 1e-05, Method: Composition-based stats. Identities = 45/308 (14%), Positives = 90/308 (29%), Gaps = 50/308 (16%) Query: 15 YRYDRHGRLTEKT-----------DLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAE 63 Y YD+HG++ +K D + D RY Y+ + + Sbjct: 524 YDYDKHGQVVKKESEDGKKSQWWWDEQQRLIANEIDGTLLRYSYNEEDLVNGVAYPDGCI 583 Query: 64 PLVESRYLYDPLGRRVAKRVWRRE-----RDLTGWMSLSRKPQ------VTWYGWDGDRL 112 + YD GRR + R + E + + SR Q +T Y W Sbjct: 584 AQL----AYDQFGRRTSVRYFNDEDKVGYSEEYSYDEHSRVAQIRTPAGITSYQWGALAQ 639 Query: 113 TTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPV 172 Y+ L ++ + G + G+V F + Sbjct: 640 QEAVIFPDGSHISYEYDQQRNLTKLVRSDGLEFEFLYDDEGQL--------SGTVGFDNL 691 Query: 173 LVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLP 232 Q I +V++ + + ++ ++ + + G Sbjct: 692 QSQFDYDDMGRIHRKQVADRTVLYRYDAAGYLKHVKAGNGSSIVENHFNYTFG----GRL 747 Query: 233 LALVSTEGATEWCAEYDEWGNLLNE-ENPHQLQQLIRLPGQQYDE----ESGLYYNRHRY 287 + +Y +G+L + ++ Q GQ+ + + L ++ RY Sbjct: 748 TFASNRHQTL--QYQYSSFGHLTKRIQGQFEIAQEFNRVGQRVSQVLPDNTELNFSYDRY 805 Query: 288 YDPLQGRY 295 GR+ Sbjct: 806 -----GRF 808 Score = 45.6 bits (106), Expect = 0.005, Method: Composition-based stats. Identities = 49/275 (17%), Positives = 85/275 (30%), Gaps = 31/275 (11%) Query: 12 HYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYL 71 + ++YD GR + D+ T Y Y+ +LV ++ E +Y Sbjct: 437 TWRWQYDELGR---------KAQAIYPDQSTVNYQYNQHGQLVS----KFHSSGKEVQYG 483 Query: 72 YDPLGRRVAKRVWRRERDLTGWMSLSRK-------PQVTWYGWD--GDRLTTIQNDRTRI 122 YD LG+ V + + + SL ++ VT Y +D G + D + Sbjct: 484 YDGLGKLVKTVSPDGDIEKAYYNSLGQRVWDTDQFGCVTEYDYDKHGQVVKKESEDGKKS 543 Query: 123 QTIYQPGS-------FTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQ 175 Q + L+R +L Q + + G + Sbjct: 544 QWWWDEQQRLIANEIDGTLLRYSYNEEDLVNGVAYPDGCIAQLAYDQFGRRTSVRYFNDE 603 Query: 176 MLDRLESEILADRVSEESRRWLASCGLTVEQ-MQNQMDPVYTPARKIHLYHCDHRGLPLA 234 E D S ++ + + + Q + V P Y D + Sbjct: 604 DKVGYSEEYSYDEHSRVAQIRTPAGITSYQWGALAQQEAVIFPDGSHISYEYDQQRNLTK 663 Query: 235 LVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRL 269 LV ++G E+ YD+ G L LQ Sbjct: 664 LVRSDG-LEFEFLYDDEGQLSGTVGFDNLQSQFDY 697 Score = 44.4 bits (103), Expect = 0.008, Method: Composition-based stats. Identities = 38/250 (15%), Positives = 73/250 (29%), Gaps = 27/250 (10%) Query: 22 RLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYLYDPLGRRVAK 81 R +K D +R T + Y HRL+ P++E YD GR V Sbjct: 267 RFEQKDDRWLVKQVRNGTFSTFQLQYSRNHRLIEIAY--NKRPVLEC--QYDKQGRLVEL 322 Query: 82 RVWRRERDLTGWM---------SLSRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQPGSFT 132 + ++ LT + + + Y + G + G Sbjct: 323 LNAKSQKVLTTYTYDEHDDLVSATNHLGLKEQYQYRGHLIVKRVRPTGFTHYFEWDG--- 379 Query: 133 PLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSEE 192 E A + + + + + S E L +++S Sbjct: 380 -----EGANAKCIRNVGDAGIYDYRFHYQGNHSSYSDSLDHQWSFLHDEQGNLLEKISPT 434 Query: 193 SRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWG 252 + W +++ + +Y P + Y + G ++ + G YD G Sbjct: 435 GKTWRWQ----YDELGRKAQAIY-PDQSTVNYQYNQHGQLVSKFHSSGKEV-QYGYDGLG 488 Query: 253 NLLNEENPHQ 262 L+ +P Sbjct: 489 KLVKTVSPDG 498 Score = 44.0 bits (102), Expect = 0.011, Method: Composition-based stats. Identities = 43/265 (16%), Positives = 77/265 (29%), Gaps = 41/265 (15%) Query: 16 RYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYLYDPL 75 +YD+ GRL E + + V+ Y YD LV T ++ +Y Y Sbjct: 312 QYDKQGRLVELLNAKSQKVL-------TTYTYDEHDDLVSATN----HLGLKEQYQY--R 358 Query: 76 GRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQPGSFTPLI 135 G + KRV ++ WDG + I+ + G + Sbjct: 359 GHLIVKRV-------------RPTGFTHYFEWDG-----EGANAKCIRNVGDAGIYDYRF 400 Query: 136 RVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSEESRR 195 + + + + + G D L + A + + Sbjct: 401 HYQGNHSSYSDSLDHQWSFLHDEQGNLLEKISPTGKTWRWQYDELGRKAQAIYPDQSTVN 460 Query: 196 WLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLL 255 + Q+ + + K Y D G + VS +G A Y+ G + Sbjct: 461 YQY-------NQHGQLVSKFHSSGKEVQYGYDGLGKLVKTVSPDGDI-EKAYYNSLGQRV 512 Query: 256 NEENPHQLQQLIRL--PGQQYDEES 278 + + GQ +ES Sbjct: 513 WDTDQFGCVTEYDYDKHGQVVKKES 537 >UniRef50_D0HCV2 Rhs protein n=3 Tax=Vibrio mimicus VM223 RepID=D0HCV2_VIBMI Length = 1617 Score = 192 bits (487), Expect = 3e-47, Method: Composition-based stats. Identities = 93/336 (27%), Positives = 130/336 (38%), Gaps = 66/336 (19%) Query: 13 YLYRYDRHGRLTEKTDLIPEG-----VIRTDDERTHRYH--YDSQHRLVHYTRTQYAEPL 65 +L+ YD L ++ G V+ DD R R YD R++ R Sbjct: 1197 HLFGYDSELNLNQQGFATEYGDSDSNVVSLDDARVKRQSRQYDKAGRVLDTGR------- 1249 Query: 66 VESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGD-RLTTIQN-DRTRIQ 123 RY YD GR V K ++ +P+ T + W+GD RLT I+ D R + Sbjct: 1250 --FRYHYDKCGRVVEKTEYKD----------GFRPKTTRFVWNGDDRLTHIELPDGGRYR 1297 Query: 124 TIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESE 183 Y P + E + + A+ +Q S GSV+ + Sbjct: 1298 YRYDP--LGRRVAKECLSTQRITEYLWDGANIVQHSQKTADGSVIQEIEYLYE------- 1348 Query: 184 ILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATE 243 ES R LA Q A ++H DH G P L S G Sbjct: 1349 -------PESFRPLAQVTHKANQ-----------ASQLHYIVTDHAGTPQELCSENGEVV 1390 Query: 244 WCAEYDEWG-----------NLLNEENPHQLQQLIRLPGQQYDEESGLYYNRHRYYDPLQ 292 W E WG + + +L +R GQ D ESGLYYN +RYYD Sbjct: 1391 WQGEQALWGHYQQRNTFPNHGIREHAHNDELYCDLRYQGQIEDRESGLYYNVNRYYDADS 1450 Query: 293 GRYITQDPIGLKGGWNFYQYPLNPVQYIDSMGLASK 328 G+Y++QDPIG GG Y NP++++D +GLA Sbjct: 1451 GQYLSQDPIGFSGGLRPQAYVFNPLEWVDPLGLAPS 1486 Score = 96.4 bits (238), Expect = 2e-18, Method: Composition-based stats. Identities = 54/241 (22%), Positives = 87/241 (36%), Gaps = 37/241 (15%) Query: 5 NRIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEP 64 R+ + Y YD+ GR+ EKT+ + R +T R+ ++ RL H Sbjct: 1242 GRVLDTGRFRYHYDKCGRVVEKTEY--KDGFRP---KTTRFVWNGDDRLTHIELPDGG-- 1294 Query: 65 LVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDR----- 119 RY YDPLGRRVAK +R +T Y WDG + Sbjct: 1295 --RYRYRYDPLGRRVAKECLSTQR-------------ITEYLWDGANIVQHSQKTADGSV 1339 Query: 120 -TRIQTIYQPGSFTPLIRV--ETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQM 176 I+ +Y+P SF PL +V + A T Q+ E+G V + Sbjct: 1340 IQEIEYLYEPESFRPLAQVTHKANQASQLHYIVTDHAGTPQELCSENGEVVWQGEQALWG 1399 Query: 177 LDRLESEILADRVSEESRRWLASCGLTVE-QMQNQMDPVYTPARKIH------LYHCDHR 229 + + + E + C L + Q++++ +Y + + D Sbjct: 1400 HYQQRNTFPNHGIREHAHNDELYCDLRYQGQIEDRESGLYYNVNRYYDADSGQYLSQDPI 1459 Query: 230 G 230 G Sbjct: 1460 G 1460 Score = 62.1 bits (149), Expect = 5e-08, Method: Composition-based stats. Identities = 49/301 (16%), Positives = 89/301 (29%), Gaps = 36/301 (11%) Query: 11 AHYLYRYDRHGRLTEKTDLIPEGVIRTDDER------------THRYHYDSQHRLVHYTR 58 Y YD G +T + +E+ Y Y+ + T Sbjct: 744 ETVQYSYDEWGNVTRAIEPNGAEHAYDYNEQGWLLCYTNPMGAVWSYEYNKFGDVTAITD 803 Query: 59 TQYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMS---LSRKPQVTWYGWD------G 109 + +++ Y+ G+R + + L+R YG D G Sbjct: 804 PE----ARQTQITYNEFGQRATVTGPDGSTTHYSYYNNGLLARVEPPVGYGMDLFYDKQG 859 Query: 110 DRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVF 169 + + +++ + +Y+ S P RV+ G A + + L ++ G S F Sbjct: 860 RLIKRVTDNKQVREWVYEKNSKQP-CRVQYEDGTHAHFE-YDIEGNLTKATDALGNSQHF 917 Query: 170 PPVLVQMLDRLESEILADR--VSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHL---- 223 L ++ + A + ++ D A + H Sbjct: 918 NYGPFDKLSKVVDPLGAATHYHYNAEAEFAGVTNRHGQKWYYDFDKGGRVAAEHHYDARV 977 Query: 224 --YHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEESGLY 281 Y D G + +G YD G LL +Q + +YD S L Sbjct: 978 DHYQYDAAGRLNRHIKPDGVQHCH-SYDPSGKLLETVTLDHNEQPLGKAWYEYDAASRLT 1036 Query: 282 Y 282 Y Sbjct: 1037 Y 1037 Score = 45.9 bits (107), Expect = 0.003, Method: Composition-based stats. Identities = 42/241 (17%), Positives = 65/241 (26%), Gaps = 41/241 (17%) Query: 64 PLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQ 123 +E + Y +G + + R DG RL ++ R RIQ Sbjct: 547 NGLEYHFEY-AVGTTLRLTKQQDAYGNATQFVYDRGCLKWVVLCDG-RLIQVETQRNRIQ 604 Query: 124 TIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESE 183 T+ L + + + LQ + G + + L R Sbjct: 605 TLT-------LCEADKTPTVVLARYSYDNSGFLQSVRADAGRNFDYQYSKEGYLTRWND- 656 Query: 184 ILADRVSEESRRWLASCGLTVEQMQNQMDPV-YTPARKIHLYHC----------DHRGLP 232 L+ E T D + Y IH YH D + P Sbjct: 657 -LSQTWVEHDYDEKGRTIATRCSGGYWDDGITYDDENHIHYYHTAFGGTQVLHLDDQNRP 715 Query: 233 LALVSTEGA---TEW----------------CAEYDEWGNLLNEENPHQLQQLIRLPGQQ 273 L +V G + W YDEWGN+ P+ + Q Sbjct: 716 LQMVDEFGNPTKSVWQNDLLISQENALGETVQYSYDEWGNVTRAIEPNGAEHAYDYNEQG 775 Query: 274 Y 274 + Sbjct: 776 W 776 Score = 44.8 bits (104), Expect = 0.006, Method: Composition-based stats. Identities = 74/383 (19%), Positives = 114/383 (29%), Gaps = 110/383 (28%) Query: 4 DNRIARDAHY-----LYRYDRHGRLTEKTDLIPEGVIR--------------TDDERTH- 43 R+A + HY Y+YD GRL + P+GV T D Sbjct: 964 GGRVAAEHHYDARVDHYQYDAAGRLNR--HIKPDGVQHCHSYDPSGKLLETVTLDHNEQP 1021 Query: 44 ----RYHYDSQHRLVHYTRTQYAEPLVESRYL------------------YDPLGRRVAK 81 Y YD+ RL T+ + V Y YD GRR+ Sbjct: 1022 LGKAWYEYDAASRLT---YTENGDAWVSFVYSQSGLLLEENLNGTPIVHEYDEHGRRIGS 1078 Query: 82 RVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQ-NDRTRIQTIYQPGSFTPLIRVETA 140 + R Y W +L + + T +Q Y P T Sbjct: 1079 SGSKTARQ---------------YEWAKHQLQQLSVGEHTPLQFAYHPSGHEKTR--ATE 1121 Query: 141 TGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSEESRRWLASC 200 G Q L+Q G +G S+ D L+ + D + R+ + Sbjct: 1122 QGFSLHHQWSETGLLLEQQLGRNGDSLR-----QYQYDALDRLVGIDDAKRGNSRFSLNA 1176 Query: 201 GLTVEQMQNQMDPVYTPARKIHLYHCD------HRGLPLALVSTEGATE---------WC 245 V Q + + R +HL+ D +G ++ Sbjct: 1177 NGQV-QAERLQKGWDSQYRFVHLFGYDSELNLNQQGFATEYGDSDSNVVSLDDARVKRQS 1235 Query: 246 AEYDEWGNLLNEENPHQLQQLIRLPGQQYDE-----ESGLYYNRHRYYDPLQGRYI-TQD 299 +YD+ G +L+ R YD+ E Y + R P R++ D Sbjct: 1236 RQYDKAGRVLD-------TGRFRY---HYDKCGRVVEKTEYKDGFR---PKTTRFVWNGD 1282 Query: 300 P----IGLKGGWNFYQYPLNPVQ 318 I L G Y+Y +P+ Sbjct: 1283 DRLTHIELPDG-GRYRYRYDPLG 1304 >UniRef50_C8Q7Z5 YD repeat protein n=8 Tax=Enterobacteriaceae RepID=C8Q7Z5_9ENTR Length = 1507 Score = 192 bits (487), Expect = 3e-47, Method: Composition-based stats. Identities = 87/405 (21%), Positives = 143/405 (35%), Gaps = 25/405 (6%) Query: 4 DN-RIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYA 62 DN R + Y++DR ++ + + + YD+ R+ + Sbjct: 1057 DNLRQRLVSERRYQWDRADQIIRQIVTDGAPSSPAEKYSQSLWGYDAAGRMTRSIQ---- 1112 Query: 63 EPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDG-DRLTTIQNDRTR 121 P E R+ YD R + E W +L ++ + + +DG R++ + + Sbjct: 1113 -PGGEERFWYDAADNRTS------EDLHPVWDNLLKRLEGIRWEYDGFGRMSERHDSQRG 1165 Query: 122 IQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLE 181 + + + V + ++ G + V P Sbjct: 1166 VVQRFSYDDEHRIREVLIEGDAEYTRAQYQYDALGRRIGKQVWRRHVAQPECTHYAWSGM 1225 Query: 182 SEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGA 241 + S+ + ++D Y +++ YH + GLP + G Sbjct: 1226 QMVGEHSDSKPEAAVQYVYAENSYEPIARVDS-YQQHAEVYWYHTEINGLPDRVTDIRGD 1284 Query: 242 TEWCAEYDEWGNLLNEENPHQ--LQQLIRLPGQQYDEESGLYYNRHRYYDPLQGRYITQD 299 T W + WG E + Q +R GQ D E+GL+YN RYYDP GRY D Sbjct: 1285 TVWQGAFAAWGRTTRESTGVDWEVPQNLRFQGQYLDRETGLHYNTFRYYDPCGGRYTQLD 1344 Query: 300 PIGLKGGWNFYQYPLNPVQYIDSMGLASKYGHLNNGGYGARPNKPPTPDPSKLPDIAKQL 359 PIGL GG N YQY + + ID +GLA++ LNNG Y + D + Sbjct: 1345 PIGLMGGLNLYQYAPDVLTGIDPLGLATR---LNNGQYNVFQEHTINAEHIYSSDGVQFN 1401 Query: 360 RLPYPIDQASSAPNVFKTFFRALSPYDYTLYCRKWVK-PNLTCTP 403 R + F+ P W+K PN +P Sbjct: 1402 RANTEFINRMNTDATFRRDMLGRYP-----ELSDWMKNPNKASSP 1441 Score = 117 bits (292), Expect = 1e-24, Method: Composition-based stats. Identities = 50/233 (21%), Positives = 83/233 (35%), Gaps = 23/233 (9%) Query: 1 MWPDNRIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQ 60 +W DN + R + YD GR++E+ D + R+ YD +HR+ Sbjct: 1135 VW-DNLLKRLEGIRWEYDGFGRMSERHD--------SQRGVVQRFSYDDEHRIREVLIEG 1185 Query: 61 YAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQND-- 118 AE ++Y YD LGRR+ K+VWRR +P+ T Y W G ++ +D Sbjct: 1186 DAE-YTRAQYQYDALGRRIGKQVWRRHVA---------QPECTHYAWSGMQMVGEHSDSK 1235 Query: 119 -RTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQML 177 +Q +Y S+ P+ RV++ + + L + G V+ Sbjct: 1236 PEAAVQYVYAENSYEPIARVDSYQQHAEVYWYHTEINGLPDRVTDIRGDTVWQGAFAAWG 1295 Query: 178 DRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRG 230 D ++ R+ + Y P D G Sbjct: 1296 RTTRESTGVDWEVPQNLRFQGQYLDRETGLHYNTFRYYDPCGG-RYTQLDPIG 1347 Score = 49.0 bits (115), Expect = 4e-04, Method: Composition-based stats. Identities = 46/277 (16%), Positives = 85/277 (30%), Gaps = 52/277 (18%) Query: 11 AHYLYRYDRHGRLTEKTDLIPEGVIRT-------------DDERTHRYHYDSQHRLVHYT 57 A + Y +D G LT + D + I T D +Y Y+ +V T Sbjct: 637 ARWEYAWDERGNLTMERDPLDRTRITTWHPLYALPLKEVLPDGAQWQYEYNLAGDVVALT 696 Query: 58 RTQYAEPLVESRYLYDPLG---RRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTT 114 +R+ ++ G RR+ + WD Sbjct: 697 DPAGG----VTRFEWNEQGDLTRRI-----------------DALENSHQFWWDMRGQLI 735 Query: 115 IQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLV 174 + D + Q+ Q + L+ A G + Q S A L DG +F Sbjct: 736 REEDCSGYQSQRQYDACGKLLSTTDALGNTDRYQ-WSAAGRLHSYVRADGRETLFKYNKA 794 Query: 175 QMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLA 234 +L + + +R + Q+ PA ++ Y + G + Sbjct: 795 GLLCGQNIDGMLER-------------KVTLNARGQVIEAIDPAGQVTRYDFNRAGRLVT 841 Query: 235 LVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRLPG 271 L + +W +Y G L+ +++ + + G Sbjct: 842 LTNGN-RQQWRFDYTPAGLLMQQQDYAGRKTEYQYNG 877 Score = 47.9 bits (112), Expect = 7e-04, Method: Composition-based stats. Identities = 48/269 (17%), Positives = 84/269 (31%), Gaps = 50/269 (18%) Query: 14 LYRYDRHGRLTE---------KTDLIPEGVI---RTDDERTHRYHYDSQHR---LVHYTR 58 Y ++R GRL + D P G++ + R Y Y+ + L+ + Sbjct: 830 RYDFNRAGRLVTLTNGNRQQWRFDYTPAGLLMQQQDYAGRKTEYQYNGVQQVETLIRHPV 889 Query: 59 TQYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQND 118 + Y YD LGR VA+ + T + + ++ + +D R Sbjct: 890 RDSQLAPLVVNYEYDVLGRMVARETAQHR---TEYHYHALSTEIHRFPYDAWR------- 939 Query: 119 RTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLD 178 I +P ++ G L Q S A + + + V+P D Sbjct: 940 -QAIINECEPTDAEVVVFQRDTLGRLVSEQNHSGAYHHRYDALGNLSASVYP-------D 991 Query: 179 RLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVST 238 E + L L S G T Q D ++ + Sbjct: 992 GREMQFLRYGTGHLLEMRLTSGGRTHSLASYQRDRLHRETHRT----------------- 1034 Query: 239 EGATEWCAEYDEWGNLLNEENPHQLQQLI 267 +G E +YD G + + L+Q + Sbjct: 1035 QGELELETQYDIAGRITQRRSVDNLRQRL 1063 >UniRef50_D0BWK2 YD repeat protein n=1 Tax=Acinetobacter sp. RUH2624 RepID=D0BWK2_9GAMM Length = 1361 Score = 192 bits (487), Expect = 3e-47, Method: Composition-based stats. Identities = 73/323 (22%), Positives = 119/323 (36%), Gaps = 41/323 (12%) Query: 15 YRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYLYDP 74 Y +DR R+ I+ ++ + YD + RL+ +R+ A + Y YD Sbjct: 847 YSFDRDNRIIS---------IKRNNNLNDNFSYDQEGRLLTESRSNDASSIYAITYTYDK 897 Query: 75 LGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQPGSFTPL 134 G R++ R + Y + G++LTT+ + T Y + + Sbjct: 898 NGNRLSLRASGTHLQPAANVD---------YAYTGNKLTTLTKNGTAQPLNYTANAELYM 948 Query: 135 IRV--------ETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLD----RLES 182 + + T R ++ G + + VQ + L Sbjct: 949 GEILPSYDYAGRRRGEGTSTTINRYMSYNANNERTLSGSTSAWSNTAVQFIYDEKSHLIG 1008 Query: 183 EILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGAT 242 E A + WL + KI+ D + P L+ + G+ Sbjct: 1009 EYTATGIPLVEYIWLGDKPVAAV-------YESGATTKIYYIVTDVQNTPRRLIDSNGSV 1061 Query: 243 EWCAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEESGLYYNRHRYYDPLQGRYITQDPIG 302 W + +G + +R PGQ YD +G +YN +R+Y+P GRY+ DPIG Sbjct: 1062 VWSWDSTAFG---LGSPVSTITFNLRFPGQYYDATTGQFYNHNRFYNPELGRYMEPDPIG 1118 Query: 303 LKGGWNFYQYP-LNPVQYIDSMG 324 L GG N Y Y NPV Y+D G Sbjct: 1119 LAGGLNPYIYALNNPVMYVDMTG 1141 >UniRef50_Q2SGE8 Rhs family protein n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SGE8_HAHCH Length = 1452 Score = 191 bits (486), Expect = 4e-47, Method: Composition-based stats. Identities = 83/344 (24%), Positives = 125/344 (36%), Gaps = 62/344 (18%) Query: 14 LYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYLYD 73 + YD G L K++ + RY ++ L R + YD Sbjct: 1015 RFEYDAEGNLITKSE---------PGGKIWRYEWNVSGTLKKVIRPDG----RIVTFEYD 1061 Query: 74 PLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQPGSFTP 133 LGRR++K + ++T + WDG+ P Sbjct: 1062 ALGRRLSK---------------AFNGRITRWVWDGN---------------------NP 1085 Query: 134 LIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSEES 193 L L+ ++ + P+ Q + ES Sbjct: 1086 LHEWVEMQDAQEARAAFDLSSAPAETVSGRPA-IARSPIQPQAPPATSPQAHPAGAGGES 1144 Query: 194 R--RWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEW 251 + WL + D ++ D+ G P A+ +EG W A W Sbjct: 1145 KLITWLFEPESFTPMAKQVGDAYFS-------ILADYLGTPNAMYDSEGRQVWSANISVW 1197 Query: 252 GNLLNEENPHQLQQLIRLPGQQYDEESGLYYNRHRYYDPLQGRYITQDPIGLKGGWNFYQ 311 G L N + ++ R PGQ DEE+GLYYNR RYYDP G+YI QDPI +KGG N Y+ Sbjct: 1198 GELRNLKG-NRGACPFRWPGQYEDEETGLYYNRFRYYDPDSGQYIRQDPIRIKGGLNLYK 1256 Query: 312 YPLNPVQYIDSMGLASKYGHLNNGGYGARPNKPPTPDPSKLPDI 355 Y + +ID++GL G + G G R T K+ ++ Sbjct: 1257 YVSDVTTWIDTLGLQG--GSASYGRSGRRIGHADTDGLEKIGEL 1298 Score = 52.9 bits (125), Expect = 3e-05, Method: Composition-based stats. Identities = 46/277 (16%), Positives = 80/277 (28%), Gaps = 26/277 (9%) Query: 8 ARDAHYLYRYDRHGRLTEKTDLIPE-----------GVIRTDDERTHRYHYDSQHRLVHY 56 A +L+ YD H RLT K D + + + YD + + + Sbjct: 573 ANGGAWLWEYDEHCRLTAKVDPLDRRTRYSYEGAMLTSVAGPAGQETHIEYDGYNNPIGF 632 Query: 57 TRTQYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQ 116 P + YD GR + + + L R QV DG+ T Sbjct: 633 ATPDGGLP----EWRYDNHGRITLAIDAQGVQRRLQYDLLGRVTQVNE--PDGNLRTFSY 686 Query: 117 NDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQM 176 + + V + + R+ A T Q + + Sbjct: 687 DPEGNLVRATDAQ-----FDVHFTYQGMGRIASRTQAGTTIQFEYDTEEQLTAITNEHGD 741 Query: 177 LDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALV 236 + R E + +SE + Q+ + P + Y D G + ++ Sbjct: 742 VYRFELGPTGETLSES--GFDGLLRRYERNAAGQVRRLLKPGGRHTDYAYDTLGRVMRIL 799 Query: 237 STEGATEWCAEYDEWGNLLNEENPHQLQQLIRLP-GQ 272 ++G +Y G L+ N R GQ Sbjct: 800 HSDGEE-ERFQYRPDGELMMAVNSSATLSFERNALGQ 835 Score = 52.5 bits (124), Expect = 4e-05, Method: Composition-based stats. Identities = 42/261 (16%), Positives = 69/261 (26%), Gaps = 34/261 (13%) Query: 12 HYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYL 71 Y YD G LT+ T D + YD + +V + Sbjct: 535 STRYEYDPRGNLTQITQ---------PDGSVLQMEYDERDNVVKAQDANGG----AWLWE 581 Query: 72 YDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQPGSF 131 YD R AK + + T Y ++G LT++ + I + + Sbjct: 582 YDEHCRLTAK--------------VDPLDRRTRYSYEGAMLTSVAGPAGQETHI-EYDGY 626 Query: 132 TPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVL-----VQMLDRLESEILA 186 I T G L + + + + + +L V D Sbjct: 627 NNPIGFATPDGGLPEWRYDNHGRITLAIDAQGVQRRLQYDLLGRVTQVNEPDGNLRTFSY 686 Query: 187 DRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWCA 246 D R A + T A + D A+ + G + Sbjct: 687 DPEGNLVRATDAQFDVHFTYQGMGRIASRTQAGTTIQFEYDTEEQLTAITNEHGD-VYRF 745 Query: 247 EYDEWGNLLNEENPHQLQQLI 267 E G L+E L + Sbjct: 746 ELGPTGETLSESGFDGLLRRY 766 Score = 49.4 bits (116), Expect = 3e-04, Method: Composition-based stats. Identities = 63/363 (17%), Positives = 105/363 (28%), Gaps = 106/363 (29%) Query: 3 PDNRIARDAHYLYRYDRHGRLTEKTDL----------IPEGVIRTDDERTHRYHYDSQHR 52 PD + + YD G L TD + RT T ++ YD++ + Sbjct: 677 PDGNL-----RTFSYDPEGNLVRATDAQFDVHFTYQGMGRIASRTQAGTTIQFEYDTEEQ 731 Query: 53 LVHYTRTQY----------AEPLVES-------RYLYDPLG--RRVAKRVWRRERDLTGW 93 L T E L ES RY + G RR+ K R Sbjct: 732 LTAITNEHGDVYRFELGPTGETLSESGFDGLLRRYERNAAGQVRRLLKPGGRHTDYAYDT 791 Query: 94 MSLSRK-------PQVTWYGWDGDRLTTIQNDRTRIQTI-----------------YQPG 129 + + + Y DG+ + + + T + Sbjct: 792 LGRVMRILHSDGEEERFQYRPDGELMMAVNSSATLSFERNALGQVTKEICGDLWVSSEYD 851 Query: 130 SFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPV---------------LV 174 + R+ ++ G + QR D + + G+ S F Sbjct: 852 ALGLRSRMRSSLGAGQQIQRNVAGDVMGVTTGDAQFSAQFKRDELGRELERSLPGGVRSR 911 Query: 175 QMLDRL----ESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRG 230 DRL E+L V E +R + +E++ + ++ V + D G Sbjct: 912 WRRDRLGRPSLHEVLKADVPESARTYFWGVNGRLEKIHDSLNGVSV-------FEHDELG 964 Query: 231 LPL-----------ALVSTEGATEWCA-----EYDEWGNLLNEENPHQLQQLIRLPGQQY 274 + + GA EY G LL+ P+ L +R +Y Sbjct: 965 NLVSARYGDGVMDLRMPDAIGALFQSYNRKDREYGPAGQLLSMRRPNGL---VRF---EY 1018 Query: 275 DEE 277 D E Sbjct: 1019 DAE 1021 >UniRef50_B4ETQ2 Rhs-family protein n=9 Tax=Enterobacteriaceae RepID=B4ETQ2_PROMH Length = 1703 Score = 191 bits (485), Expect = 5e-47, Method: Composition-based stats. Identities = 83/331 (25%), Positives = 126/331 (38%), Gaps = 37/331 (11%) Query: 11 AHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRY 70 ++YD + +TE P + + + Q + TR A+ + Y Sbjct: 1243 QDEKFQYDNNLNITE-HLTTPSSSMVPSEAQGAMLQLFQQQQAGRVTRRYTAKGYQD--Y 1299 Query: 71 LYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWD-GDRLTTIQNDRTRIQTIYQPG 129 YD GR K V R +P+ Y W+ ++LT + Y Sbjct: 1300 HYDVNGRLAKKIVHTR----------GFRPREWRYLWNTQNQLTACFTPKGDC-WHYTYD 1348 Query: 130 SF-TPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADR 188 +F L + +T +LA D L + + Q+++ Sbjct: 1349 AFGRRLSKTKTVDSDLAHI------DPLFPQIKPKITTWRYLWSGDQLIEETPIYADGTL 1402 Query: 189 VSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWCAEY 248 + + +WL G + Q K+H DH+G P + S G W Sbjct: 1403 ANAQQVQWLYQPGEITPTARYQQ-------GKLHYVVTDHQGTPREIFSEGGQASWAGRL 1455 Query: 249 DEWGNL--------LNEENPHQLQQLIRLPGQQYDEESGLYYNRHRYYDPLQGRYITQDP 300 + WG + E +P+ + R GQ DEESGLYYNR RYYD G+Y++ DP Sbjct: 1456 NTWGQMQFWRYRDGKAENDPNYTECPFRFAGQYEDEESGLYYNRFRYYDRETGQYLSPDP 1515 Query: 301 IGLKGGWNFYQYPLNPVQYIDSMGLASKYGH 331 IGL GG N Y Y P ++D GLA G+ Sbjct: 1516 IGLLGGLNPYGYVHCPTGWVDPFGLAGGKGN 1546 Score = 59.0 bits (141), Expect = 4e-07, Method: Composition-based stats. Identities = 56/309 (18%), Positives = 88/309 (28%), Gaps = 67/309 (21%) Query: 5 NRIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEP 64 N I Y Y Y+ I D + Y Y+ +L H+T Sbjct: 764 NEIGERTEYGYHYNGL-----------LAYIYLPDGKAIYYDYNDYGQLTHFTSAFGD-- 810 Query: 65 LVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQT 124 E + YD G LT + QV Y G+ L I + + Q Sbjct: 811 --EWQLSYDENGN------------LTIVTDPQGRQQVYEYSQHGELLKAITPNGAQWQY 856 Query: 125 IYQPGSF----------------TPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVV 168 Y P L R+ T L T R + + G ++ Sbjct: 857 HYNPAHQLIKTTNPYQHSTEYHSDELGRLLHYTDALNHTTRYQYSTEHASTNG-SLSKIL 915 Query: 169 FPPVLVQMLDRLESE---ILADRVSEESRRWLASCGLTVEQMQ-------------NQMD 212 P + Q +D + D + +R + + ++ ++ Sbjct: 916 LPDGVEQQIDYDSERRVIAVTDGEGKTTRYRYGPFDVLLAMIRPDGSEIRFEYDSLTRLK 975 Query: 213 PVYTPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQ 272 V +++LY D G + V G C YD G + P + R Sbjct: 976 KVVNANGEVYLYERDKAGQIIREVDFTGREI-CYRYDRLGRRIATRYPDNHELRWRY--- 1031 Query: 273 QYDEESGLY 281 ESGL Sbjct: 1032 ---NESGLV 1037 Score = 47.1 bits (110), Expect = 0.001, Method: Composition-based stats. Identities = 42/254 (16%), Positives = 64/254 (25%), Gaps = 36/254 (14%) Query: 2 WPDNRIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQY 61 W D YD GR+ R+ YD R+ Y + Sbjct: 678 WGD---TDSTELTIDYDEQGRVV--------ATHSPSGFWNDRFIYDDYQRMTTYIDAEG 726 Query: 62 AEPLVESRYLY--DPLGRRVAKRVWRRER----DLTGWMSLSRKPQVTWYGWDGDRLTTI 115 SRY Y D L R +WR ++ + T YG+ + L Sbjct: 727 GF----SRYYYNDDNLVTRTIDPLWRETYTEWEQRKKIAEINEIGERTEYGYHYNGLLAY 782 Query: 116 QNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQ 175 Y + L +A G+ + L G V+ Sbjct: 783 IYLPDGKAIYYDYNDYGQLTHFTSAFGDEWQLS-YDENGNLTIVTDPQGRQQVYEYS--- 838 Query: 176 MLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLAL 235 + L ++ +W Q+ +P YH D G L Sbjct: 839 -----QHGELLKAITPNGAQWQYHYN-PAHQLIKTTNPYQHSTE----YHSDELGRLLHY 888 Query: 236 VSTEGATEWCAEYD 249 T +Y Sbjct: 889 TDALNHTT-RYQYS 901 Score = 42.1 bits (97), Expect = 0.052, Method: Composition-based stats. Identities = 38/261 (14%), Positives = 76/261 (29%), Gaps = 38/261 (14%) Query: 9 RDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVES 68 + + YD RL + + + + Y D +++ + E Sbjct: 960 DGSEIRFEYDSLTRLKKVVNA---------NGEVYLYERDKAGQIIR----EVDFTGREI 1006 Query: 69 RYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQP 128 Y YD LGRR+A R + + + + D Q R T Y Sbjct: 1007 CYRYDRLGRRIATRYPDNHELRWRYNESGLVVEQSEWFED------EQESRCLSTTQYSY 1060 Query: 129 GSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADR 188 + LI+ T S+ + G + ++ + ++ + R Sbjct: 1061 NARQQLIK---------ATNPDSVVEFEYDDQGRLCSERINGQEIIHQWNEADNTLALTR 1111 Query: 189 VSEESRRW-LASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWCAE 247 E + + G NQ P+ + + G L + + Sbjct: 1112 FGERELHYAFGALGELTSLQVNQHAPL-----QFSY---NAVGQ-EYLRRSRAGFVNSSH 1162 Query: 248 YDEWGNLLNEENPHQLQQLIR 268 Y G L ++ +Q ++ Sbjct: 1163 YTATGLLAHQRAGRGTEQFLQ 1183 >UniRef50_A3KUM5 Rhs family protein n=10 Tax=Pseudomonas aeruginosa RepID=A3KUM5_PSEAE Length = 931 Score = 190 bits (483), Expect = 7e-47, Method: Composition-based stats. Identities = 82/333 (24%), Positives = 119/333 (35%), Gaps = 25/333 (7%) Query: 6 RIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPL 65 ++ Y++D +G + + R T Y YD RL Q Sbjct: 473 KVGPWQS-DYQHDANGNIQQ---------HRHSLWGTLDYQYDPLDRLTEERGGQGGR-- 520 Query: 66 VESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTI 125 Y YD +G R + P G + T Q Sbjct: 521 ---SYAYDAVGNRTQRSDNPASGGTASSQDYQYAPDSNRLTAIGAQAVTSDAAGNLTQDR 577 Query: 126 YQ----PGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLE 181 + L V ++A+ + +L + + E + ++ P Q+L E Sbjct: 578 AARKLAYDAQGRLQSVSLDGQQVAEYRYNALGQRIVKLTPESVTTYLYGPDG-QLLGEAE 636 Query: 182 SEILADRVSEESRRWLASCGL-TVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEG 240 + ++ + WL S L T++ + V P + H DH P G Sbjct: 637 HDGSGRKLRAQYYLWLDSLPLATIDADYDVQGKVGNPT--LLYLHGDHLDTPRLATDASG 694 Query: 241 ATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEESGLYYNRHRYYDPLQGRYITQDP 300 W + D +G + Q +R PGQ YD ESGL+YN R YDP GRY+ DP Sbjct: 695 QIAWQWQSDAFGR-GEALSQGSTQVNLRFPGQYYDAESGLHYNYFRDYDPETGRYVESDP 753 Query: 301 IGLKGGWNFYQYP-LNPVQYIDSMGLASKYGHL 332 IGLKGG N Y Y NP+ Y D GL L Sbjct: 754 IGLKGGLNTYGYVYGNPLTYSDPKGLTPAAAGL 786 Score = 51.7 bits (122), Expect = 6e-05, Method: Composition-based stats. Identities = 52/312 (16%), Positives = 83/312 (26%), Gaps = 69/312 (22%) Query: 6 RIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDD-------------------------- 39 R LY YD G LT+ T+ + + V R D Sbjct: 47 RTDVQDVTLYAYDSRGNLTQVTNALGQ-VTRLGDYDERGKPGSITDANGVTSSLAYTGVD 105 Query: 40 ---------ERTHRYHYDSQHRLVHYTRTQYAEPLVESRYLYD----------PLGRRVA 80 T R+ YD+ ++ TR + Y YD LG R+ Sbjct: 106 GWLASVSTAGSTTRFDYDAVGQITRVTRGDGSW----LSYEYDDARRLVAIGNNLGERLE 161 Query: 81 KRVWRRERDLTGWMSLSRKPQVTWYGWDGD---RLTTIQNDRTRIQTIYQPGSFTPLIRV 137 V + + + V W D RL + ++ + P+ Sbjct: 162 YDVDTKGNRTAQRIKDASGSLVRQQQWAYDELGRLLRAVGAGGQTRSFAYDLNDNPVG-- 219 Query: 138 ETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSEESRRWL 197 ET + A +Q D L GG L +E+ R + Sbjct: 220 ETNPRQFAHSQAFDALDRLVGQSDPLGGKTQLAYDAQDNL----TEVKDPRGVTTRYEYD 275 Query: 198 ASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNE 257 LT + +P + D G + G YD L+ Sbjct: 276 GLGNLTR---------LVSPDSGTTTFEHDAAGNVIRRTDARGTVT-EYRYDALNRLIER 325 Query: 258 ENPHQLQQLIRL 269 +P ++ Sbjct: 326 HSPSDPSLDVQY 337 Score = 48.3 bits (113), Expect = 7e-04, Method: Composition-based stats. Identities = 45/264 (17%), Positives = 79/264 (29%), Gaps = 42/264 (15%) Query: 9 RDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVES 68 + +D G + +TD Y YD+ +RL+ R ++P ++ Sbjct: 287 DSGTTTFEHDAAGNVIRRTDAR---------GTVTEYRYDALNRLIE--RHSPSDPSLDV 335 Query: 69 RYLYD--PLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTI- 125 +Y YD G + G + +R V Y G+ + +++ R QT+ Sbjct: 336 QYRYDLTADGN--------KGIGRLGAIEGARDSLVYRYDERGNLVEQVRSIRLDQQTLL 387 Query: 126 ----YQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLE 181 Y+ + L+ + +G R A S G P++ Q+ Sbjct: 388 DRVTYRYDAANQLLDIGYPSGLAIGYPRN--AGGQVASVTLAVGDKAPSPLVGQIAYLPF 445 Query: 182 SEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGA 241 +L W L+ E Q+ Y D G Sbjct: 446 GPLL-------RLTWGNGITLSREYDQDYQLLRQKVGPWQSDYQHDANGNIQQ----HRH 494 Query: 242 TEW---CAEYDEWGNLLNEENPHQ 262 + W +YD L E Sbjct: 495 SLWGTLDYQYDPLDRLTEERGGQG 518 >UniRef50_C7HJS3 YD repeat protein (Fragment) n=3 Tax=Clostridium thermocellum DSM 2360 RepID=C7HJS3_CLOTM Length = 783 Score = 189 bits (479), Expect = 2e-46, Method: Composition-based stats. Identities = 87/386 (22%), Positives = 143/386 (37%), Gaps = 49/386 (12%) Query: 13 YLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYLY 72 Y Y YD +G ++ ++++ Y YD+ +RL ++ R++Y Sbjct: 229 YRYAYDGNGNQI----------LKEENDKVTAYSYDALNRLKEVAYP----GSIKERFIY 274 Query: 73 DPLGRRVAKRVWRRERDLTGWMSLSRKPQV------TWYGWDGDRLTTIQNDRTRIQTIY 126 D G R+ KR + + + S +R Q T Y +D R I+ + +Y Sbjct: 275 DANGNRL-KREYGDIFEQYEYDSCNRLIQRIKNGLLTEYEYDA-RGNLIKEKEGELTKLY 332 Query: 127 QPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILA 186 F LIRV+ G + + V+ + + E L Sbjct: 333 SYDGFDRLIRVQNPDGTYMENIYDAENLRTVSIENGRYNRYVYNGRNIA-CEVDEDWSLK 391 Query: 187 DRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWCA 246 DR+ G T+ Q ++ Y + H H G AL +G Sbjct: 392 DRI---------VFGHTILQREDSDKNEY------YYIHNAH-GDITALTDGKGEVINSY 435 Query: 247 EYDEWGNLLNEENPHQLQQLIRLPGQQYDEESGLYYNRHRYYDPLQGRYITQDPIGLKGG 306 YD +GN+L ++ +++ + G+ D +G YY R RYY+P GR++ +D G Sbjct: 436 SYDAFGNIL--DSVEKIENRFKYSGEMLDPVTGQYYLRARYYNPSIGRFMQEDTFR-GDG 492 Query: 307 WNFYQYP-LNPVQYIDSMGLASKYGHLNNGGYG-----ARPNKPPTPDPSKLPDIAKQLR 360 N Y Y NP++YID G + + R S L D + Sbjct: 493 LNLYTYVANNPIKYIDPTGHCKENAAIAYQVENILRRLRRNPIISLSKVSILLDYLIEGL 552 Query: 361 LPYPID-QASSAPNVFKTFFRALSPY 385 P+D A+S P V + A Y Sbjct: 553 SYNPVDHTATSGPTVMEAALIAKHVY 578 Score = 62.1 bits (149), Expect = 4e-08, Method: Composition-based stats. Identities = 50/280 (17%), Positives = 96/280 (34%), Gaps = 41/280 (14%) Query: 3 PDNRIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYA 62 PD R ++YDR GR+ ++ D R+ Y+Y++ + + ++ Sbjct: 52 PDGR-----KITFKYDRQGRMVQRIGK---------DGRSTYYNYNADNNITG----RWE 93 Query: 63 EPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVT------WYGWDGDRLTTIQ 116 E +Y Y+ G A ++ K + T Y ++ + L + Sbjct: 94 EEGQMEKYEYNVDGSLAASISGTTIHTYAYTLAGRLKSKTTNGQKVLEYDYNKNGLISRL 153 Query: 117 NDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQM 176 D + Y L V T G+++ ++ +T+ Q G + L +M Sbjct: 154 PDISGTPVEYTYDVLGRLTTV-TNGGKVSARYEYNIDNTIAQVLYGSGVCARYEYNLDKM 212 Query: 177 LDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALV 236 + RL + D +E + + Q+ + + K+ Y D + Sbjct: 213 ITRL---LNIDPTGKEMFAYRYAYDGNGNQILKEEND------KVTAYSYDALNRLKEVA 263 Query: 237 STEGATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQYDE 276 G+ + YD GN L E +Q +YD Sbjct: 264 YP-GSIKERFIYDANGNRLKREYGDIFEQ------YEYDS 296 Score = 59.8 bits (143), Expect = 2e-07, Method: Composition-based stats. Identities = 45/267 (16%), Positives = 85/267 (31%), Gaps = 39/267 (14%) Query: 9 RDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVES 68 + Y YD G L TD + T RY Y+S + L + Sbjct: 11 DGTNIKYDYDYAGNLVSTTD---------GNGNTTRYTYNSLNLLSEIIDPDG----RKI 57 Query: 69 RYLYDPLGR---RVAK------RVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDR 119 + YD GR R+ K + + ++TG + + Y DG L + Sbjct: 58 TFKYDRQGRMVQRIGKDGRSTYYNYNADNNITGRWEEEGQMEKYEYNVDGS-LAASISGT 116 Query: 120 TRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDR 179 T Y + ++ +T G+ + + + G V + ++ L Sbjct: 117 TIHTYAY---TLAGRLKSKTTNGQKVLEYDYNKNGLISRLPDISGTPVEYTYDVLGRLTT 173 Query: 180 LESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTE 239 + + + S R+ + T+ Q+ + Y+ D L + Sbjct: 174 VTNG------GKVSARYEYNIDNTIAQVLYGSGVCAR-----YEYNLDKMITRLLNIDPT 222 Query: 240 GAT--EWCAEYDEWGNLLNEENPHQLQ 264 G + YD GN + +E ++ Sbjct: 223 GKEMFAYRYAYDGNGNQILKEENDKVT 249 Score = 51.7 bits (122), Expect = 5e-05, Method: Composition-based stats. Identities = 40/224 (17%), Positives = 61/224 (27%), Gaps = 17/224 (7%) Query: 105 YGWDGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDG 164 Y +D D T Y S L + G + +Q+ G + Sbjct: 17 YDYDYAGNLVSTTDGNGNTTRYTYNSLNLLSEIIDPDGRKITFKYDRQGRMVQRIGKDGR 76 Query: 165 GSVVFPPVLVQMLDRLESEILADRVSEESRRWLAS--CGLTVEQMQNQMDPVY----TPA 218 + + R E E ++ LA+ G T+ + T Sbjct: 77 STYYNYNADNNITGRWEEEGQMEKYEYNVDGSLAASISGTTIHTYAYTLAGRLKSKTTNG 136 Query: 219 RKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEES 278 +K+ Y + GL L G YD G L N ++ D Sbjct: 137 QKVLEYDYNKNGLISRLPDISGTPV-EYTYDVLGRLTTVTNGGKVSARYEYN---IDNTI 192 Query: 279 GLYYNR----HRY-YDPL--QGRYITQDPIGLKGGWNFYQYPLN 315 RY Y+ R + DP G + Y Y N Sbjct: 193 AQVLYGSGVCARYEYNLDKMITRLLNIDPTGKEMFAYRYAYDGN 236 Score = 41.3 bits (95), Expect = 0.075, Method: Composition-based stats. Identities = 27/152 (17%), Positives = 43/152 (28%), Gaps = 38/152 (25%) Query: 6 RIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYA--- 62 RI Y YD G L ++ + E T Y YD RL+ Sbjct: 303 RIKNGLLTEYEYDARGNLIKE----------KEGELTKLYSYDGFDRLIRVQNPDGTYME 352 Query: 63 -------------EPLVESRYLYDPLGRRVA---------KRVWRRERDLTGWMSLSRKP 100 E +RY+Y GR +A K + + Sbjct: 353 NIYDAENLRTVSIENGRYNRYVY--NGRNIACEVDEDWSLKDRIVFGHTILQREDSDKNE 410 Query: 101 QVTWYGWDGDRLTTIQNDRTRIQTIYQPGSFT 132 + GD +T + + + + Y +F Sbjct: 411 YYYIHNAHGD-ITALTDGKGEVINSYSYDAFG 441 >UniRef50_C0EPY1 Putative uncharacterized protein n=7 Tax=Neisseria RepID=C0EPY1_NEIFL Length = 434 Score = 188 bits (478), Expect = 3e-46, Method: Composition-based stats. Identities = 74/322 (22%), Positives = 121/322 (37%), Gaps = 22/322 (6%) Query: 12 HYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYL 71 + Y YD+ G L + D Y YD R++ +Q + Sbjct: 7 NRRYAYDKAGNLIQSADQRSG---------VLHYVYDKIGRILEARNSQSGRS---ETFA 54 Query: 72 YDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTI---QNDRTRIQTIYQP 128 +DP ++ + + + S +R + + D L + Q Q Y+ Sbjct: 55 FDPAHNILSDKTAEGKGKGSNISSGNRLKEYNGIEYTYDALGNLIYRQLPNGENQY-YRY 113 Query: 129 GSFTPLIRVE----TATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEI 184 L+R E E+ + L + + P + + + Sbjct: 114 DLENQLVRAEIKKPAGNTEIWEYAYDPFGRRLSKERQDKLAWTSTDPKRTHFVW-DGTRL 172 Query: 185 LADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEW 244 L + + S +L + + E + A+ + +H D G+P + G W Sbjct: 173 LQEYTYKGSYTYLYTDQDSYEPLAQVFHNNRDEAQYLAYFHNDQIGIPREMTDIRGNLLW 232 Query: 245 CAEYDEWGNLLNEENPHQ-LQQLIRLPGQQYDEESGLYYNRHRYYDPLQGRYITQDPIGL 303 EY WG L + +Q Q RL Q YD E+GL+YN RYY+P GR+I+QDPIGL Sbjct: 233 YGEYTAWGRLKKDGRVYQHAHQPFRLQNQYYDRETGLHYNYFRYYEPETGRFISQDPIGL 292 Query: 304 KGGWNFYQYPLNPVQYIDSMGL 325 G N Y + N ++D GL Sbjct: 293 LGEDNLYWFGPNTAIWVDLFGL 314 Score = 101 bits (250), Expect = 8e-20, Method: Composition-based stats. Identities = 35/154 (22%), Positives = 55/154 (35%), Gaps = 16/154 (10%) Query: 4 DNRIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAE 63 NR+ Y YD G L + + Y YD +++LV + A Sbjct: 79 GNRLKEYNGIEYTYDALGNLIYRQ---------LPNGENQYYRYDLENQLVRAEIKKPAG 129 Query: 64 PLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQ 123 Y YDP GRR++K + + P+ T + WDG RL + Sbjct: 130 NTEIWEYAYDPFGRRLSKERQDKLAWTST------DPKRTHFVWDGTRLLQEYTYKGSYT 183 Query: 124 TIYQP-GSFTPLIRVETATGELAKTQRRSLADTL 156 +Y S+ PL +V + A+ D + Sbjct: 184 YLYTDQDSYEPLAQVFHNNRDEAQYLAYFHNDQI 217 >UniRef50_Q2SFR5 Rhs family protein n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SFR5_HAHCH Length = 471 Score = 188 bits (478), Expect = 3e-46, Method: Composition-based stats. Identities = 52/119 (43%), Positives = 72/119 (60%), Gaps = 1/119 (0%) Query: 214 VYTPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQ 273 + ++++ +H DH G P + + EG W A Y +GNL ++ +Q +R GQ Sbjct: 25 AFIQDKQVYHFHLDHLGTPQEMTNAEGEVVWSARYKAYGNLAL-KDVEDVQNPLRFQGQY 83 Query: 274 YDEESGLYYNRHRYYDPLQGRYITQDPIGLKGGWNFYQYPLNPVQYIDSMGLASKYGHL 332 YDEE+GL+YNR RYYDP R+I QDP+GL GG N YQY LNP ++D GL +K G Sbjct: 84 YDEETGLHYNRRRYYDPSAARFINQDPVGLLGGDNNYQYALNPTGWVDPYGLTAKPGDC 142 >UniRef50_UPI0001B53B37 YD repeat protein n=1 Tax=Streptomyces sp. AA4 RepID=UPI0001B53B37 Length = 1465 Score = 188 bits (477), Expect = 4e-46, Method: Composition-based stats. Identities = 88/359 (24%), Positives = 123/359 (34%), Gaps = 67/359 (18%) Query: 10 DAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTR----------- 58 + D GR T T Y YD+ + H Sbjct: 1067 TGARRFDLDPLGRATRVT----------GAGWHESYQYDASGNVRHAEHGHPHAASALSG 1116 Query: 59 -TQYAEPLVE----SRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWD-GDRL 112 YA L+ Y YD GR V L LSR P V Y WD D+L Sbjct: 1117 PRGYAGTLLREAGPVSYQYDAQGRVV----------LAHKKRLSRPPAVWRYSWDPDDQL 1166 Query: 113 TTIQN-DRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPP 171 + D R + +Y P + + GSV Sbjct: 1167 VELATPDGVRWRYLYDP-----------------------FGRRIAKLRLAADGSVAGRV 1203 Query: 172 VLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMD---PVYTPARKIHLYHCDH 228 + L ++ A RV+ + W ++ + Q + + P + + D Sbjct: 1204 DFLWDGHVLAEQVAAGRVT--TWDWDSAEFRPLAQRERTIAADRPQDRVDEEFYAIVTDF 1261 Query: 229 RGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEESGLYYNRHRYY 288 G L+ G W A+ WG + +R PGQ +DEESGLYYN RYY Sbjct: 1262 AGAATELIDPGGNVAWHADRTLWGYRAGASQ-GGVSVPMRFPGQYHDEESGLYYNYFRYY 1320 Query: 289 DPLQGRYITQDPIGLKGGWNFYQYPLNPVQYIDSMGLASKYGHLNNGGYGARPNKPPTP 347 DP GRY + DP+GL GG N + Y NP ++D GL++ + G R P Sbjct: 1321 DPETGRYASPDPLGLHGGDNPHAYVANPTSWLDPFGLSANQRRWIDHSDGWRLGIDRFP 1379 Score = 64.4 bits (155), Expect = 8e-09, Method: Composition-based stats. Identities = 48/272 (17%), Positives = 73/272 (26%), Gaps = 48/272 (17%) Query: 13 YLYRYDRHGRLTEKTDLIPEGVIRTDDERTH-------------RYHYDSQHRLVHYTRT 59 Y + YD GR+T+ D E D R YD ++RL T Sbjct: 535 YAFAYDHAGRVTKWVDRNGEWYSYEYDHRGRCVATDGSGGAVSGTLEYDDENRLTVET-- 592 Query: 60 QYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDG-DRLTTIQND 118 D GR R + + L + T WDG DRL + Sbjct: 593 -------------DSQGRVTRHCFNERRQLIRQVDPLGNE---TRQVWDGYDRLAATVDP 636 Query: 119 RTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLD 178 R Y L+ G TL G D V P Sbjct: 637 LGRTT-AYGYDDRGNLVTATRPDGS----------QTLVTYGEFDLPVVRIDPDGGVWRY 685 Query: 179 RLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVST 238 + +++ + ++ + + D + R D GLP+ + Sbjct: 686 AYDERGNPVALTDPAGAVVSYGRNERGHLTSVTDALGNVRR----IRADAAGLPVEITDP 741 Query: 239 EGATEWCAEYDEWGNLLNEENPHQLQQLIRLP 270 G D +G +P + R Sbjct: 742 LGGVT-RCVRDPFGRPSEISDPLGQVRRFRWT 772 Score = 57.9 bits (138), Expect = 8e-07, Method: Composition-based stats. Identities = 44/289 (15%), Positives = 79/289 (27%), Gaps = 47/289 (16%) Query: 13 YLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYLY 72 + Y Y+ G+L + D + R RY YD+ +L ++T A VE + Y Sbjct: 851 WSYEYNEAGKLIREIDY---------NGREVRYAYDAAGQLT--SQTNGAGETVE--FRY 897 Query: 73 DPLGRRVAKRVWR---RERDLTGWMSLSRKPQVTWYGWDGD---RLTTIQNDRTRIQTIY 126 D LG V +R R + + + D R+ + + + Y Sbjct: 898 DLLGNVVERRHAGGVSRFEYNAARQVVRAANEASEVVLQRDPLGRVLAETGNGRTVSSRY 957 Query: 127 QPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILA 186 R +L+ S + P + L+S + Sbjct: 958 DAAGRRIARRTHAGAESWWGYDAAGRPTSLRT--AARTMSFSYDPAGHLVEWLLDSGAML 1015 Query: 187 DRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHC-------------------D 227 + + + R +A TV + + D Sbjct: 1016 AQSWDSNDRLVAQTVSTVAGRAGAAGSARRTQHRAFQFRADGVVSAIEDQLTGARRFDLD 1075 Query: 228 HRGLPLALVSTEGATEWCAEYDEWGNLLNEEN-----PHQLQQLIRLPG 271 G + +YD GN+ + E+ L G Sbjct: 1076 PLGRATRVTGA--GWHESYQYDASGNVRHAEHGHPHAASALSGPRGYAG 1122 Score = 56.0 bits (133), Expect = 3e-06, Method: Composition-based stats. Identities = 48/254 (18%), Positives = 77/254 (30%), Gaps = 41/254 (16%) Query: 15 YRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYLYDP 74 + YD GRL E + + + + YD R+ + Y YD Sbjct: 516 FDYDEAGRLREVVNS---------SRKPYAFAYDHAGRVTKWVDRNGEW----YSYEYDH 562 Query: 75 LGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQPGSFTPL 134 GR VA ++G + D +RLT + + R+ L Sbjct: 563 RGRCVA--TDGSGGAVSGTLEYD----------DENRLTVETDSQGRVTRHCF-NERRQL 609 Query: 135 IRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSEESR 194 IR G + Q D L + G + + DR ++ Sbjct: 610 IRQVDPLGNETR-QVWDGYDRLAATVDPLGRTTAYGYD-----DRGNLVTATRPDGSQTL 663 Query: 195 RWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNL 254 L V ++ P + Y D RG P+AL GA + G+L Sbjct: 664 VTYGEFDLPVVRID--------PDGGVWRYAYDERGNPVALTDPAGAVVSYGRNER-GHL 714 Query: 255 LNEENPHQLQQLIR 268 + + + IR Sbjct: 715 TSVTDALGNVRRIR 728 Score = 54.0 bits (128), Expect = 1e-05, Method: Composition-based stats. Identities = 47/320 (14%), Positives = 85/320 (26%), Gaps = 76/320 (23%) Query: 12 HYLYRYDRHGRLTEKT-----------DLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQ 60 Y YD G+LT +T DL+ V R R+ Y++ ++V Sbjct: 871 EVRYAYDAAGQLTSQTNGAGETVEFRYDLLGNVVERRHAGGVSRFEYNAARQVVRAANEA 930 Query: 61 Y---------------AEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSR------K 99 YD GRR+A+R G+ + R Sbjct: 931 SEVVLQRDPLGRVLAETGNGRTVSSRYDAAGRRIARRTHAGAESWWGYDAAGRPTSLRTA 990 Query: 100 PQVTWYGWD-GDRLTTIQNDRTRIQTIYQPGSFTPLIRVETA--TGELAKTQRRSLADTL 156 + + +D L D + + + + + A R Sbjct: 991 ARTMSFSYDPAGHLVEWLLDSGAMLAQSWDSNDRLVAQTVSTVAGRAGAAGSARRTQHRA 1050 Query: 157 QQSGGEDGGSVVFPPVLVQMLDRLESEILADRVS----EESRRWLASCGLTVEQMQNQMD 212 Q + S + + L+ A RV+ ES ++ AS + + + Sbjct: 1051 FQFRADGVVSAIEDQLTGARRFDLDPLGRATRVTGAGWHESYQYDASGNVRHAEHGHPHA 1110 Query: 213 PVYTPARKIHL-----------YHCDHRGLP-------------------------LALV 236 + + Y D +G + L Sbjct: 1111 ASALSGPRGYAGTLLREAGPVSYQYDAQGRVVLAHKKRLSRPPAVWRYSWDPDDQLVELA 1170 Query: 237 STEGATEWCAEYDEWGNLLN 256 + +G W YD +G + Sbjct: 1171 TPDG-VRWRYLYDPFGRRIA 1189 Score = 46.7 bits (109), Expect = 0.002, Method: Composition-based stats. Identities = 50/306 (16%), Positives = 80/306 (26%), Gaps = 44/306 (14%) Query: 6 RIARDAH-YLYRYDRHGRLTEKTDLIPEGVIRTDDERTH-RYHYDSQHRLVHYTRTQYAE 63 RI D + Y YD G TD V +ER H D+ + Sbjct: 675 RIDPDGGVWRYAYDERGNPVALTDPAGAVVSYGRNERGHLTSVTDALGNVRRIRADAAGL 734 Query: 64 PL-------VESRYLYDPLGR---------RVAKRVWRRERDLTGWMSLSRKPQVTWYGW 107 P+ +R + DP GR +V + W E L+ + Sbjct: 735 PVEITDPLGGVTRCVRDPFGRPSEISDPLGQVRRFRWTVEGRLSSRTMPDGSVERWIRDA 794 Query: 108 DGDRLTTIQNDRTRIQTI----------YQPGSFTPLIRVETATGELAKT--------QR 149 +G+ + + +T +P R +T L+ T Sbjct: 795 EGNEVAYVDALGQTTKTWLTHFDLPAAQLEPDGGRYEFRYDTEMRLLSTTNPQGLVWSYE 854 Query: 150 RSLADTLQQSGGEDGGSVVFPPVLVQMLDRLES------EILADRVSEESRRWLASCGLT 203 + A L + +G V + L + E D + R A Sbjct: 855 YNEAGKLIREIDYNGREVRYAYDAAGQLTSQTNGAGETVEFRYDLLGNVVERRHAGGVSR 914 Query: 204 VEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQL 263 E + + D G LA G T + YD G + Sbjct: 915 FEYNAARQVVRAANEASEVVLQRDPLGRVLAET-GNGRTV-SSRYDAAGRRIARRTHAGA 972 Query: 264 QQLIRL 269 + Sbjct: 973 ESWWGY 978 >UniRef50_Q2SIG5 Rhs family protein n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SIG5_HAHCH Length = 1427 Score = 187 bits (475), Expect = 7e-46, Method: Composition-based stats. Identities = 84/340 (24%), Positives = 137/340 (40%), Gaps = 37/340 (10%) Query: 11 AHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQ-YAEPLVESR 69 A YD G +T ++ + ++Y YD +RL+ + A L + Sbjct: 956 ARVTLGYDSVGNITSQSTEHGD----------YQYSYDKLYRLIDADYPESDAFNLQDES 1005 Query: 70 YLYDPLGRRVAKRVWRRERDLTGWMSLSR---KPQVTWYGWDGDRLT---TIQNDRTRIQ 123 + YD + RVA + R + + + T+Y +D + +I + Sbjct: 1006 FEYDGVSNRVAHTILARPEREELEYNEANQLIRQGDTYYHYDHNGHLISKSIDKNGDHPT 1065 Query: 124 TIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESE 183 Y + LIRVE + + + + DG F M+ Sbjct: 1066 YKYIYNNKERLIRVEAGGDGIVASYGYNPFGH-RMWKEVDGLKTYFLYNHSGMVGEY--- 1121 Query: 184 ILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARK-IHLYHCDHRGLPLALVSTEGAT 242 D + + + G T P++ A + + Y DH G P + S G Sbjct: 1122 ---DSFGALIKEYHYTPGNT-----WMTSPLFQRAGENTYYYQNDHLGAPRQMASRNGQI 1173 Query: 243 EWCAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEESGLYYNRHRYYDPLQGRYITQDPIG 302 W A Y+ +G + + + +R PGQ +D+ESG+++N R Y+P GRYI +DPI Sbjct: 1174 VWKAAYEVFGRVKIFVDKA--ENNLRFPGQYFDQESGMHHNYFRDYNPGYGRYIQRDPIS 1231 Query: 303 LKGGWNFYQYPL-NPVQYIDSMGLASKYGHLNNGGYGARP 341 + GG N Y Y NPV Y+D +GLA +N G G+ P Sbjct: 1232 VYGGINVYAYANGNPVVYMDPLGLA----KMNVGVGGSVP 1267 Score = 62.5 bits (150), Expect = 4e-08, Method: Composition-based stats. Identities = 49/294 (16%), Positives = 96/294 (32%), Gaps = 44/294 (14%) Query: 6 RIARDAHYLYR--YDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAE 63 R A Y D +G K+ + PEG + T Y Y++ + + TR + Sbjct: 489 RTASIGGATYTENLDTYGN--AKSVVNPEGNVST-------YTYNALGQAITETRPEGG- 538 Query: 64 PLVESRYLYDPLGRRVA-----KRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQND 118 Y YD G ++ KRV E D G + + P + ++L + Sbjct: 539 ---VYTYSYDDAGNLLSIEDPLKRVTSFEYDPAGNLIKTTLPNTGEVRYGYNKLNEQTSV 595 Query: 119 RTRIQTIY--QPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQM 176 + +++ + ++ A G + ++ Q +V F + Sbjct: 596 TSHYGSVFKSEYNHNNRVLTFTDALGNQSLIRKTPHGQIDYQRDANGNETVYFFDDF--L 653 Query: 177 LDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALV 236 + E ++ + RW A+ + + + + + D G L Sbjct: 654 VKEAEYPTFTQQIDYDKSRWAAAVTNKFDGQEQRSN-----------FERDSIGRVSNLT 702 Query: 237 STEGATEWCAEYDEWGNLLNEENPHQLQQLIRLPG-----QQYDEE---SGLYY 282 E + EYD +G ++ + Q + G + D E +G Y Sbjct: 703 DAESNST-QFEYDVFGRVVKSTDAEQGVTQLAYDGWDNLIKLIDPENRVTGFTY 755 Score = 55.6 bits (132), Expect = 4e-06, Method: Composition-based stats. Identities = 30/193 (15%), Positives = 66/193 (34%), Gaps = 18/193 (9%) Query: 5 NRIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEP 64 N++ R Y YD +G L K+ + + D T++Y Y+++ RL+ + Sbjct: 1034 NQLIRQGDTYYHYDHNGHLISKS------IDKNGDHPTYKYIYNNKERLIRV---EAGGD 1084 Query: 65 LVESRYLYDPLGRRVAKRV--------WRRERDLTGWMSLSRKPQVTWYGWDGDRLTT-I 115 + + Y Y+P G R+ K V + + + S + Y +T+ + Sbjct: 1085 GIVASYGYNPFGHRMWKEVDGLKTYFLYNHSGMVGEYDSFGALIKEYHYTPGNTWMTSPL 1144 Query: 116 QNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQ 175 YQ ++ + G++ + ++ + ++ FP Sbjct: 1145 FQRAGENTYYYQNDHLGAPRQMASRNGQIVWKAAYEVFGRVKIFVDKAENNLRFPGQYFD 1204 Query: 176 MLDRLESEILADR 188 + D Sbjct: 1205 QESGMHHNYFRDY 1217 Score = 53.7 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 47/310 (15%), Positives = 94/310 (30%), Gaps = 46/310 (14%) Query: 8 ARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDE------------RTHRYHYDSQHRLVH 55 A + YD GR+ + TD D R + YD +++ Sbjct: 704 AESNSTQFEYDVFGRVVKSTDAEQGVTQLAYDGWDNLIKLIDPENRVTGFTYDKNNQVKS 763 Query: 56 YTRTQYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSR--------------KPQ 101 R V Y YD G + + ++ + + Q Sbjct: 764 ERRFPDGVNAVTRFYFYDENGNLIKEITPNGQKIFYHYDLADQLEKIEYFATEIAVAPEQ 823 Query: 102 VTWYGWDGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGG 161 VT + ++ D Y+ LI G +KT + S + Sbjct: 824 VTTFTYNSLGQIETYGDGDTSGQ-YRYNLMGQLIESTINYGPFSKTIKYSYDKNGRVRTY 882 Query: 162 EDGGSVVF-----PPVLVQMLDRLESEILA--DRVSEESRRWLASCGLTVEQMQNQM--- 211 + +V + P +Q ++ +L + + G+T+ ++ + + Sbjct: 883 TNPENVTYSYGYDPKGQIQTINIPGEGLLTFNRYSWNQPTQITLPGGMTINRVYDGLQRV 942 Query: 212 ------DPVYTPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQ 265 DP P ++ L D G + + G + YD+ L++ + P Sbjct: 943 KENQLDDPANNPIARVTL-GYDSVGNITSQSTEHGD--YQYSYDKLYRLIDADYPESDAF 999 Query: 266 LIRLPGQQYD 275 ++ +YD Sbjct: 1000 NLQDESFEYD 1009 Score = 44.8 bits (104), Expect = 0.008, Method: Composition-based stats. Identities = 40/276 (14%), Positives = 71/276 (25%), Gaps = 20/276 (7%) Query: 6 RIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPL 65 R Y+ D +G T T + YD R ++ Sbjct: 627 RKTPHGQIDYQRDANGNETVYFFDDFLVKEAEYPTFTQQIDYDK-SRWAAAVTNKFDGQE 685 Query: 66 VESRYLYDPLGRRVAKRVWRRERDLTGWMSLSR-------KPQVTWYGWDG-DRLTTIQN 117 S + D +GR + R + VT +DG D L + + Sbjct: 686 QRSNFERDSIGRVSNLTDAESNSTQFEYDVFGRVVKSTDAEQGVTQLAYDGWDNLIKLID 745 Query: 118 DRTRIQ-TIYQPGSFTPL-IRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQ 175 R+ Y + R + + L + +G + + L Sbjct: 746 PENRVTGFTYDKNNQVKSERRFPDGVNAVTRFYFYDENGNLIKEITPNGQKIFYHYDLAD 805 Query: 176 MLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLAL 235 L+++E V+ E L + D Y + G + Sbjct: 806 QLEKIEYFATEIAVAPEQVTTFTYNSLGQIETYGDGDTSGQ-------YRYNLMGQLIES 858 Query: 236 VSTEG--ATEWCAEYDEWGNLLNEENPHQLQQLIRL 269 G + YD+ G + NP + Sbjct: 859 TINYGPFSKTIKYSYDKNGRVRTYTNPENVTYSYGY 894 >UniRef50_A1AK54 YD repeat protein n=1 Tax=Pelobacter propionicus DSM 2379 RepID=A1AK54_PELPD Length = 1352 Score = 187 bits (474), Expect = 8e-46, Method: Composition-based stats. Identities = 78/354 (22%), Positives = 127/354 (35%), Gaps = 31/354 (8%) Query: 9 RDAHYLYRYD------------RHGRLTEK----TDLIPEGVIRTDDERTHRYHYDSQHR 52 A YRYD RHGR + D + + T+ T Y YD+ +R Sbjct: 898 NGATISYRYDNSERLVKLEHKTRHGRTIDSFSYTLDRVGNRLSTTEANATTNYGYDAIYR 957 Query: 53 LVHYTRTQYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRL 112 L++ +++ +Y YDP+G R+ ++ G + K + +D + Sbjct: 958 LLYAQQSRRHNSRDNEQYSYDPVGNRLI-GPHQQTGYSYGTGNQLLKNDQASFTYDKNGN 1016 Query: 113 TTI---------QNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGED 163 + Y L++ E ++ +++ Sbjct: 1017 LAERSLDNDQHGHHGHQSTSWKYTFDYENRLVKAENGAVNVSFAYDPFGRRIEKRTEITG 1076 Query: 164 GGSVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPAR-KIH 222 G + L E R S ++ N +P+ + + Sbjct: 1077 PGERGHDVEEGITRYLYDGMNLIRETRERHRHAGRSETISYLHGPNIDEPLAAMSDHRSW 1136 Query: 223 LYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEESGLYY 282 YH D G +AL G YD +GN ++ + Q G+++D E+GLYY Sbjct: 1137 YYHADGLGSIVALTDRHGTVVQEYNYDSFGN--PDQRGENIDQPFSYTGREWDRETGLYY 1194 Query: 283 NRHRYYDPLQGRYITQDPIGLKGG-WNFYQYP-LNPVQYIDSMGLASKYGHLNN 334 R RYYDP GR+I +DPI GG N Y Y NP+ +D GL + N Sbjct: 1195 YRARYYDPKIGRFIQKDPISFAGGDVNLYAYVLNNPINRLDPFGLWNSKTFPTN 1248 Score = 79.5 bits (194), Expect = 2e-13, Method: Composition-based stats. Identities = 49/250 (19%), Positives = 88/250 (35%), Gaps = 22/250 (8%) Query: 4 DNRIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAE 63 N++ ++ + YD++G L E++ + + +Y +D ++RLV Sbjct: 998 GNQLLKNDQASFTYDKNGNLAERSLDNDQHGHHGHQSTSWKYTFDYENRLVKAE-----N 1052 Query: 64 PLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQ 123 V + YDP GRR+ KR E G + +T Y +DG L +R R Sbjct: 1053 GAVNVSFAYDPFGRRIEKRT---EITGPGERGHDVEEGITRYLYDGMNLIRETRERHRHA 1109 Query: 124 TIYQPGSFTPLIRVETATGELA-KTQRRSLADTLQQSGG--EDGGSVVFPPVLVQMLDRL 180 + S+ ++ ++ AD L + G+VV + Sbjct: 1110 GRSETISYLHGPNIDEPLAAMSDHRSWYYHADGLGSIVALTDRHGTVVQEYNYDSFGNPD 1169 Query: 181 E-SEILADRVSEESRRWLASCGLTVEQMQN---------QMDPVYTPARKIHLYHCDHRG 230 + E + S R W GL + + Q DP+ ++LY Sbjct: 1170 QRGENIDQPFSYTGREWDRETGLYYYRARYYDPKIGRFIQKDPISFAGGDVNLYAY-VLN 1228 Query: 231 LPLALVSTEG 240 P+ + G Sbjct: 1229 NPINRLDPFG 1238 Score = 61.0 bits (146), Expect = 1e-07, Method: Composition-based stats. Identities = 49/288 (17%), Positives = 79/288 (27%), Gaps = 39/288 (13%) Query: 12 HYLYRYDRHGRLTEKTDLIPEGVIRTDD------------ERTHRYHYDSQHRLVHYTRT 59 + + YD +GR+ KTD D RT Y++ + T Sbjct: 412 SWRFVYDEYGRMIRKTDPGNNTSENGYDAAGRNISSTDAEGRTKTISYNATG---SSSVT 468 Query: 60 QYAEPLVESRY---------LYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGD 110 + + Y DPLG V + + T Y +D Sbjct: 469 EKDGSVWTHAYDPTLNVPTATTDPLGNTVRRS---YDAKGNLLSITDPDGNTTRYTYDAA 525 Query: 111 RLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFP 170 D T Y S ++ + T L +S GG+ +F Sbjct: 526 NNPLTVTDPLGNTTSYTYDSLGRVLTI-TDPDGRITINSYDERGNLLRSVDPTGGAYLFA 584 Query: 171 PVLVQMLDRLESEILADRVSEESRRW------LASCGLTVEQMQNQMDPVYT---PARKI 221 L + ++ +RV + G T+ + + T P KI Sbjct: 585 YDAAGNLTSV-TDPRGNRVGYVYDTYNTIAAITDQNGKTIRFSHDISGNLLTMKDPDGKI 643 Query: 222 HLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRL 269 Y D +A+ G T YD GN + + Sbjct: 644 TTYSYDALNRLVAITDPLGTTT-KFTYDNLGNRTAVTDGNGNLTSYTY 690 Score = 60.2 bits (144), Expect = 2e-07, Method: Composition-based stats. Identities = 40/261 (15%), Positives = 77/261 (29%), Gaps = 37/261 (14%) Query: 12 HYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYL 71 + +D G L ++ D + Y YD+ +RLV T +++ Sbjct: 622 TIRFSHDISGNLL---------TMKDPDGKITTYSYDALNRLVAITDPLG----TTTKFT 668 Query: 72 YDPLGRRVAKRVWRRERDLTGW----------------MSLSRKPQVTWYGWDGDRLTTI 115 YD LG R A + +L+ + G D+LT++ Sbjct: 669 YDNLGNRTAVTDGNGNLTSYTYNFRNKPLTIRDALGSTTTLAYGGCGSCGGGGNDKLTSL 728 Query: 116 QNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQ 175 + + Y+ L R G + S + ++ + + Sbjct: 729 TDANNNLT-GYEYDQLGRLARETDPLGNVTGYGYDSRDNLTARTDANGSTATYAYDANNR 787 Query: 176 MLDRLESEILADRVSEESRRWLASCG------LTVEQMQNQMDPVYTPARKIHLYHCDHR 229 +L + + + S ++R + + N+M Y D Sbjct: 788 LLRKTYPDGSVESFSYDARGNILTAANKHISYAFSYDANNRMLSSTGSNNGTLKYEYDPA 847 Query: 230 GLPLALVSTEGATEWCAEYDE 250 G +V+ EG YD Sbjct: 848 GNRTTMVTPEGERI-SYRYDA 867 Score = 57.9 bits (138), Expect = 8e-07, Method: Composition-based stats. Identities = 55/340 (16%), Positives = 99/340 (29%), Gaps = 50/340 (14%) Query: 22 RLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYLYDPLGRRVAK 81 LT + I+ R + Y S + L T R++YD GR + K Sbjct: 372 NLTIGSSDGRIIAIQDPAGRMTSFAY-SGNLLTSVTDPAGTS----WRFVYDEYGRMIRK 426 Query: 82 RVWRRERDLTGWMSLSR---------KPQVTWYGWDGDRLTTIQNDRTRIQTIYQPGSFT 132 G+ + R + + Y G T + D + Y P Sbjct: 427 TDPGNNTSENGYDAAGRNISSTDAEGRTKTISYNATGSSSVTEK-DGSVWTHAYDPTLNV 485 Query: 133 PLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVF------PPVLVQMLDRLESEILA 186 P + + ++ L DG + + P+ V + Sbjct: 486 PTATTDPLGNTVRRS--YDAKGNLLSITDPDGNTTRYTYDAANNPLTVTDPLGNTTSYTY 543 Query: 187 DRVSEESRRWLASCGLTVEQMQNQMDPVYT--PARKIHLYHCDHRGLPLALVSTEGATEW 244 D + +T+ + + + + P +L+ D G ++ G Sbjct: 544 DSLGRVLTITDPDGRITINSYDERGNLLRSVDPTGGAYLFAYDAAGNLTSVTDPRGNRV- 602 Query: 245 CAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEESGLYYNRHRYYDPLQGRYITQDPIGLK 304 YD + + + + IR +D L +DP Sbjct: 603 GYVYDTYNTIAAITDQNGKT--IRFS---HDISGNL--------------LTMKDP---D 640 Query: 305 GGWNFYQY-PLNPVQYI-DSMGLASKYGHLNNGGYGARPN 342 G Y Y LN + I D +G +K+ + N G A + Sbjct: 641 GKITTYSYDALNRLVAITDPLGTTTKFTYDNLGNRTAVTD 680 Score = 55.2 bits (131), Expect = 5e-06, Method: Composition-based stats. Identities = 50/326 (15%), Positives = 91/326 (27%), Gaps = 65/326 (19%) Query: 14 LYRYDRHGRLTEKT-----------DLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYA 62 Y YD + RL KT D + + ++ + YD+ +R++ T + Sbjct: 779 TYAYDANNRLLRKTYPDGSVESFSYDARGNILTAANKHISYAFSYDANNRMLSSTGSNNG 838 Query: 63 EPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSR-----KPQVTW---YGWDGDRLTT 114 +Y YDP G R ER + + + P+ T+ Y G R Sbjct: 839 ----TLKYEYDPAGNRTTMVTPEGERISYRYDAANHLTAIVSPRGTFDITYNDLGRRTKL 894 Query: 115 IQNDRTRIQTIYQP-----------------GSFTP-LIRVETATG----------ELAK 146 + I Y SF+ L RV Sbjct: 895 SYPNGATISYRYDNSERLVKLEHKTRHGRTIDSFSYTLDRVGNRLSTTEANATTNYGYDA 954 Query: 147 TQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSEE-------SRRWLAS 199 R A ++ D + PV +++ + + + S + + Sbjct: 955 IYRLLYAQQSRRHNSRDNEQYSYDPVGNRLIGPHQQTGYSYGTGNQLLKNDQASFTYDKN 1014 Query: 200 CGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEEN 259 L + N + Y D+ + + GA YD +G + + Sbjct: 1015 GNLAERSLDNDQHGHHGHQSTSWKYTFDYEN--RLVKAENGAVNVSFAYDPFGRRIEKRT 1072 Query: 260 PHQLQQLIRLPGQQYDEESGLYYNRH 285 +D E G+ + Sbjct: 1073 EITGPGERG-----HDVEEGITRYLY 1093 >UniRef50_B8FBZ2 YD repeat protein n=1 Tax=Desulfatibacillum alkenivorans AK-01 RepID=B8FBZ2_DESAA Length = 685 Score = 186 bits (473), Expect = 1e-45, Method: Composition-based stats. Identities = 74/317 (23%), Positives = 118/317 (37%), Gaps = 29/317 (9%) Query: 18 DRHGRLTEKTDLIPEGVIRTDDERTHR----YHYDSQHRLVHYTRTQYAEPLVESRYLYD 73 D G + + + + +H Y YD RL+ ++ + YD Sbjct: 47 DPAGNVFASNEYTLDKSGNVTNRISHNDSIGYAYDDLGRLIS----HVSQSSGTETFTYD 102 Query: 74 PLGRRVAKRVWRRERDLTGWMS----LSRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQPG 129 + +A + + + LS Y +G ++ +N+ T Y Sbjct: 103 EVAN-IATALENGQPITFTRNANNELLSYGDATFQYDENGAVISRTENNETV---NYFYD 158 Query: 130 SFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRV 189 +IRVE +G + + F + + + L Sbjct: 159 VDGRMIRVENGSGGVIAEYCYDPFGRRLWKEVNGTRTCYFYSDEGLIGEFTSTGTL---- 214 Query: 190 SEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWCAEYD 249 + S G + M + + YH D G P LV G+T W A Y Sbjct: 215 -------IKSYGYKPDSMWSSNPLFMVQDGVYYYYHNDRIGAPQVLVRANGSTAWSATYS 267 Query: 250 EWGNLLNEENPHQLQQLIRLPGQQYDEESGLYYNRHRYYDPLQGRYITQDPIGLKGGWNF 309 +G + + ++ +R PGQ YD E+GL+YN +RYYDP G Y + DP+GL GG N Sbjct: 268 AYGKASVDPD-SDVENNLRFPGQYYDAETGLHYNLNRYYDPEIGAYRSPDPLGLGGGVNL 326 Query: 310 YQY-PLNPVQYIDSMGL 325 Y Y NP Y+D +GL Sbjct: 327 YAYTAGNPANYVDPLGL 343 Score = 62.9 bits (151), Expect = 2e-08, Method: Composition-based stats. Identities = 48/280 (17%), Positives = 78/280 (27%), Gaps = 52/280 (18%) Query: 3 PDNRIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYA 62 +N + ++YD +G + +T+ + T Y YD R++ + Sbjct: 123 ANNELLSYGDATFQYDENGAVISRTE----------NNETVNYFYDVDGRMIRV---ENG 169 Query: 63 EPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRI 122 V + Y YDP GRR+ K V + +Y +G Sbjct: 170 SGGVIAEYCYDPFGRRLWKEV-------------NGTRTCYFYSDEGLIGEFTSTGTLIK 216 Query: 123 QTIYQPGSF---TPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDR 179 Y+P S PL V+ R L ++ G S + +D Sbjct: 217 SYGYKPDSMWSSNPLFMVQDGVYYYYHNDRIGAPQVLVRANGSTAWSATYSAYGKASVDP 276 Query: 180 LESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTE 239 D E + R+ + ++ Y P D GL Sbjct: 277 -------DSDVENNLRFPGQYYDAETGLHYNLNRYYDP-EIGAYRSPDPLGL-------- 320 Query: 240 GATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEESG 279 G Y NP + L D +G Sbjct: 321 GGGVNLYAYTA-------GNPANYVDPLGLLFSSMDNPTG 353 >UniRef50_A1TTP6 YD repeat protein n=2 Tax=Acidovorax citrulli AAC00-1 RepID=A1TTP6_ACIAC Length = 1554 Score = 186 bits (472), Expect = 2e-45, Method: Composition-based stats. Identities = 90/397 (22%), Positives = 135/397 (34%), Gaps = 81/397 (20%) Query: 6 RIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTH---RYHYDSQHRLVHYTRTQYA 62 R H Y YD GRL + + Y YD+ +LV T Sbjct: 1036 RSQGALHSRYDYDPAGRLVRHRAAVGASSTSSSATTVRLERAYAYDALGQLVARADTLRG 1095 Query: 63 EPLVESRYLYDPLGRRVAK---RVWRRERDLTGWM-----------SLSRKPQVTWYGWD 108 + YDP+GR +A + R+L + + R Q +G Sbjct: 1096 SQ----EFRYDPVGRILAALPGQGSHAPRELFAFDPAGNLLDATEAQMQRAQQPQAHGSS 1151 Query: 109 GDRLTTIQNDR----TRIQTIYQP-GSFTPLIRVETATGELAKTQ-RRSLADTLQQSGGE 162 L + ++R + Y G+ R G T+ R + L ++ Sbjct: 1152 SSGLGVVGDNRLRFYQDLHFEYDVHGNVVRRTRGNRRAGHHETTELRWNADHQLVEAASH 1211 Query: 163 DGGSVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPAR--- 219 G L R ++ AD W + ++ +Y P Sbjct: 1212 RNGVTQATHYAYDALGRRVAK--ADAFGTTRYLWDGDLMVHSQRGGKASLFIYEPGSFVP 1269 Query: 220 -------------KIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQ---- 262 +I+ Y CD G PL L +G W A+Y WG P Sbjct: 1270 LATVQGTQQPGDSRIYWYQCDQIGAPLELTDAQGYIAWAADYKVWGEATLRAVPRTATGT 1329 Query: 263 --------------------------------LQQLIRLPGQQYDEESGLYYNRHRYYDP 290 ++Q R GQQ+DEE+GL+YNR RYY+P Sbjct: 1330 DGVSGERRRGHGPVMDVHEGGGEKARPTPPAIIEQPFRFQGQQFDEETGLHYNRFRYYEP 1389 Query: 291 LQGRYITQDPIGLKGGWNFYQYPLNPVQYIDSMGLAS 327 GR+++QDPIGL GG N + Y +P ++D GL+ Sbjct: 1390 SVGRFVSQDPIGLLGGVNSFTYAPSPNNWMDPFGLSC 1426 Score = 62.5 bits (150), Expect = 4e-08, Method: Composition-based stats. Identities = 44/244 (18%), Positives = 72/244 (29%), Gaps = 32/244 (13%) Query: 14 LYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYLYD 73 Y YD G L E D + T RY +D+Q RL A RY +D Sbjct: 745 RYAYDALGHLAESADAL---------GHTTRYRHDAQGRLREVIEPTGA----THRYEWD 791 Query: 74 PLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQPGSFTP 133 G+ +A T Y + G + + D Y Sbjct: 792 GEGQLLA--------------YTDPLGGTTRYRYHGSGQPSERTDARGGVLRYHYDLGER 837 Query: 134 LIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSEES 193 L+ + G + + + G + ++ +E+ + + Sbjct: 838 LVALTNENGAHTRFTYDAADHLTDEIGFDGRHQRYVYNAAGELTHVIEAGGSDAGPGKVT 897 Query: 194 RRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGN 253 + G V + + D +R + Y D G A + A W YD G Sbjct: 898 HLERDALGRLVGK-RAHGDASAEDSRATYTY--DPLGRLTAATNPAAAIAWR--YDPVGQ 952 Query: 254 LLNE 257 +L E Sbjct: 953 ILQE 956 Score = 54.0 bits (128), Expect = 1e-05, Method: Composition-based stats. Identities = 57/295 (19%), Positives = 79/295 (26%), Gaps = 49/295 (16%) Query: 8 ARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDD------------ERTHRYHYDSQHRLVH 55 AR Y YD RL T+ T D R RY Y++ L H Sbjct: 823 ARGGVLRYHYDLGERLVALTNENGAHTRFTYDAADHLTDEIGFDGRHQRYVYNAAGELTH 882 Query: 56 YTRTQY--AEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLT 113 A P + D LGR V KR G S Y G RLT Sbjct: 883 VIEAGGSDAGPGKVTHLERDALGRLVGKR-------AHGDASAEDSRATYTYDPLG-RLT 934 Query: 114 TIQNDRTRIQTIYQP--------GSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGG 165 N I Y P + PL + E A + ++ DG Sbjct: 935 AATNPAAAIAWRYDPVGQILQEVQTLQPLPGQKGQPEERALSHEYDELGHRIRTTLPDGR 994 Query: 166 SVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYH 225 ++ + +I +R + + Q +R Y Sbjct: 995 AL----DWLHYGSGHLHQIGLTEAGPGTRTVITDIERDALHRETQRSQGALHSR----YD 1046 Query: 226 CDHRGLPLALVSTEG-----------ATEWCAEYDEWGNLLNEENPHQLQQLIRL 269 D G + + G E YD G L+ + + Q R Sbjct: 1047 YDPAGRLVRHRAAVGASSTSSSATTVRLERAYAYDALGQLVARADTLRGSQEFRY 1101 Score = 52.9 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 45/277 (16%), Positives = 90/277 (32%), Gaps = 18/277 (6%) Query: 7 IARDAHYLYRYD---RHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAE 63 +A A + YD GR+T +L + ER + +D+ R + + + Sbjct: 543 LADGARHHNEYDTLSPQGRVTVSRNLDSGAAHQFTYERHRTWMHDALGRTMGFAFDER-R 601 Query: 64 PLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQ 123 +V R D LG V++ + + + T + G+ + + Sbjct: 602 DIVAVR---DALGH-VSRTPFDANGHPEAAVDALGRETRTVFDRRGNLTLHLDAAGHATR 657 Query: 124 TIY--QPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLE 181 Y + G+ +RV A G + + + ++ + + + + Sbjct: 658 IEYGTEGGARDRPVRVTDALGHTWTHEYDARGNRIRSTDPLGRSTATQYDARGLPVALTD 717 Query: 182 SEILADR----VSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHL---YHCDHRGLPLA 234 + R S + + G T + + + A + Y D +G Sbjct: 718 AAGRIRRLQWDASAQLIAYTDCSGRTSRYAYDALGHLAESADALGHTTRYRHDAQGRLRE 777 Query: 235 LVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRLPG 271 ++ GAT E+D G LL +P R G Sbjct: 778 VIEPTGATH-RYEWDGEGQLLAYTDPLGGTTRYRYHG 813 Score = 51.3 bits (121), Expect = 7e-05, Method: Composition-based stats. Identities = 41/247 (16%), Positives = 65/247 (26%), Gaps = 34/247 (13%) Query: 11 AHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRY 70 A + Y +D G+L TD + T RY Y + T + RY Sbjct: 784 ATHRYEWDGEGQLLAYTDPL---------GGTTRYRYHGSGQPSERTDARGG----VLRY 830 Query: 71 LYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWD-GDRLTTIQN-DRTRIQTIYQ- 127 YD LG R+ + T + +D D LT D + +Y Sbjct: 831 HYD-LGERL-------------VALTNENGAHTRFTYDAADHLTDEIGFDGRHQRYVYNA 876 Query: 128 PGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILAD 187 G T +I + K + G G + A Sbjct: 877 AGELTHVIEAGGSDAGPGKVTHLERDALGRLVGKRAHGDASAEDSRATYTYDPLGRLTAA 936 Query: 188 RVSEESRRWLASCGLTVEQMQNQMDPVY----TPARKIHLYHCDHRGLPLALVSTEGATE 243 + W + Q + P+ P + + D G + +G Sbjct: 937 TNPAAAIAWRYDPVGQILQEVQTLQPLPGQKGQPEERALSHEYDELGHRIRTTLPDGRAL 996 Query: 244 WCAEYDE 250 Y Sbjct: 997 DWLHYGS 1003 Score = 45.6 bits (106), Expect = 0.004, Method: Composition-based stats. Identities = 54/269 (20%), Positives = 78/269 (28%), Gaps = 35/269 (13%) Query: 3 PDNRIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYA 62 PD R HY G L + RT R D+ HR TQ + Sbjct: 991 PDGRALDWLHY-----GSGHLHQIGLTEAGPGTRTVITDIER---DALHR-----ETQRS 1037 Query: 63 EPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRI 122 + + SRY YDP GR V R + + R + Y G + R Sbjct: 1038 QGALHSRYDYDPAGRLVRHRAAVGASSTSSSATTVRLERAYAYDALGQLVARADTLRGSQ 1097 Query: 123 QTIYQP-----------GSFTP--LIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVF 169 + Y P GS P L + A L T+ + Q+ G + Sbjct: 1098 EFRYDPVGRILAALPGQGSHAPRELFAFDPAGNLLDATEAQMQRAQQPQAHGSSSSGLGV 1157 Query: 170 PPVLVQMLDRL---ESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPAR------K 220 + E ++ + V A T E N + A + Sbjct: 1158 VGDNRLRFYQDLHFEYDVHGNVVRRTRGNRRAGHHETTELRWNADHQLVEAASHRNGVTQ 1217 Query: 221 IHLYHCDHRGLPLALVSTEGATEWCAEYD 249 Y D G +A G T + + D Sbjct: 1218 ATHYAYDALGRRVAKADAFGTTRYLWDGD 1246 Score = 43.3 bits (100), Expect = 0.019, Method: Composition-based stats. Identities = 60/339 (17%), Positives = 94/339 (27%), Gaps = 62/339 (18%) Query: 11 AHYLYRYDRHGRLTEKTDLIPEGVIRTDD--ERTHRYHYDSQHRLVHYTRTQYAEPLVES 68 AHY Y D + +L P ++ + R R+ ++ +H LV YT A Sbjct: 498 AHYHYAPDAQD---PRGELAPPNLVAHTNAAGRVRRFEWN-RHLLVGYTLADGA----RH 549 Query: 69 RYLYD---PLGRRVAKRVWRRERDLTGWMSLSRK------PQVTWYGWDGDR-LTTIQND 118 YD P GR R R + + +D R + +++ Sbjct: 550 HNEYDTLSPQGRVTVSRNLDSGAAHQFTYERHRTWMHDALGRTMGFAFDERRDIVAVRDA 609 Query: 119 RTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLD 178 + + P V+ E R TL + + Sbjct: 610 LGHVSRTPFDANGHPEAAVDALGRETRTVFDRRGNLTLHLDAAGHATRIEYGTEGGAR-- 667 Query: 179 RLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVST 238 + W +++ DP+ + D RGLP+AL Sbjct: 668 ----DRPVRVTDALGHTWTHEYDARGNRIR-STDPLGRSTATQY----DARGLPVALTDA 718 Query: 239 EGATE---W-----------------CAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEE- 277 G W YD G+L + R Q E Sbjct: 719 AGRIRRLQWDASAQLIAYTDCSGRTSRYAYDALGHLAESADALGHTTRYRHDAQGRLREV 778 Query: 278 ---SGLYYNRHRY-YDPLQGRYITQDPIGLKGGWNFYQY 312 +G HRY +D DP+G G Y+Y Sbjct: 779 IEPTG---ATHRYEWDGEGQLLAYTDPLG---GTTRYRY 811 >UniRef50_Q399U9 Rhs family protein n=3 Tax=Proteobacteria RepID=Q399U9_BURS3 Length = 1446 Score = 186 bits (471), Expect = 2e-45, Method: Composition-based stats. Identities = 82/365 (22%), Positives = 125/365 (34%), Gaps = 55/365 (15%) Query: 6 RIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPL 65 R + YD GR + + + D+ ++ YD+ ++ +Y Sbjct: 958 RTQGKLTSHFGYDAVGRRARQ---LAQRGRAADELLAKQWQYDAAGDVIQKRDLRYG--- 1011 Query: 66 VESRYLYDPLGR--------------RVAKRVWRRERDLTGWMSLSRK---PQVTWYGWD 108 + Y YD GR R D G + + + +D Sbjct: 1012 -TTSYRYDATGRIEQAAGPGLPSEVFRWDAAANLVSSDHPGGFVEHNRLKMFEDKRFEYD 1070 Query: 109 --GDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGS 166 G + + + + + + L V T T ++ +GG Sbjct: 1071 VYGRLVRKLSGHGPAKELVLEYDDWNQLKTVVTKDRLGVGTTHFEYDAFGRRIRKLNGG- 1129 Query: 167 VVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPV----YTPARKIH 222 + RL E DR EE+ +L V + V ++ Sbjct: 1130 -YASTDFLWDGMRLVQETYHDRQGEEALTYLYESNSYVPLARIDQGKVAANDANARDAVY 1188 Query: 223 LYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQL------------------- 263 +H D GLP L + EG W A Y WGN + EE + Sbjct: 1189 YFHNDVSGLPEELTNAEGELIWQARYKVWGNAVQEEWIARTSQQSVPEWGEVQLASATPA 1248 Query: 264 ----QQLIRLPGQQYDEESGLYYNRHRYYDPLQGRYITQDPIGLKGGWNFYQYPLNPVQY 319 Q +R GQ D E+GL+YN R+YDP GR+I DPIGL GG N Y Y +P+ + Sbjct: 1249 HVPRPQNLRFQGQYLDRETGLHYNTFRFYDPDIGRFINPDPIGLSGGHNLYAYAESPLIW 1308 Query: 320 IDSMG 324 ID G Sbjct: 1309 IDPWG 1313 Score = 57.9 bits (138), Expect = 9e-07, Method: Composition-based stats. Identities = 46/283 (16%), Positives = 78/283 (27%), Gaps = 36/283 (12%) Query: 18 DRHGRLTEKTDLIPEGVIRT-----DDERTHRYHYDSQH--RLVHYTRTQYAE---PLVE 67 DR+G E + V R R YD H R+ T+ + P Sbjct: 393 DRNGNWIEVEREARDEVARPVRLHDSAGRLLTLSYDKLHPQRIAAIELTRGVDGEQPDTL 452 Query: 68 SRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVT-------WYGWDGDRLTTIQNDRT 120 RY Y G VA Q T +Y W G + D Sbjct: 453 VRYAYSNAGELVAVTDRSGHIGRRFAYEHGLMVQHTLRGGLQCFYAWQG-----VGRDAR 507 Query: 121 RIQTIYQPG-SFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDR 179 ++ G ++T + + + R T + + V + Sbjct: 508 VVRHWTNDGEAYTFNADLAQRSVTITDQIGRVTRWTWNEDQQPTSHTDAEGHVWQLEWNA 567 Query: 180 LESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTE 239 + + + R+ Q + + V + D P+A Sbjct: 568 KRQLVSTTDPAGNTTRFEYDERGRQTQRIDALGQVERTEWNGYY---DL---PVAETDPA 621 Query: 240 GATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEESGLYY 282 + W YD+ GNL +P + + +E GL + Sbjct: 622 -NSRWIYRYDDLGNLTMTRDPA------GFATEYHRDERGLVH 657 Score = 56.0 bits (133), Expect = 3e-06, Method: Composition-based stats. Identities = 56/303 (18%), Positives = 85/303 (28%), Gaps = 51/303 (16%) Query: 8 ARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDD------------ERTHRYHYDSQHRLVH 55 A A + YD GRL E D + R R+ YD RL Sbjct: 725 ADGARQAFFYDVAGRLIEVVDANQRSTRYELNPRGLLLSRTDAANRVVRFGYDDAFRLAS 784 Query: 56 YTRTQYAEPLVESRYLYDPLGRRV----------AKRVWRRERDLTGWMSLSRKPQVTWY 105 T R+ YD RR KR + + G + K + T Y Sbjct: 785 LTNENRES----YRFQYD---RRDLVAEQIGLDGHKRAYEYDVCGQGTIVRDGKIE-TRY 836 Query: 106 GWDGD-RLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDG 164 D RLT Q R + +Y S + T + + R + GE Sbjct: 837 ERDAIGRLTAKQATHERCEYLYDKASRIASAELYTLAARGSSLKNRVSLKYGAR--GEVL 894 Query: 165 GSVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVY--------- 215 L D L + + E + WL V Q++ V Sbjct: 895 EEYTPTGWLAHTYDELGNRVSTTISGERTIDWLHYGSGHVHQIRVDGAAVADIERDDLHR 954 Query: 216 ----TPARKIHLYHCDHRGLPLALVSTEGA-----TEWCAEYDEWGNLLNEENPHQLQQL 266 T + + D G ++ G +YD G+++ + + Sbjct: 955 EVLRTQGKLTSHFGYDAVGRRARQLAQRGRAADELLAKQWQYDAAGDVIQKRDLRYGTTS 1014 Query: 267 IRL 269 R Sbjct: 1015 YRY 1017 Score = 53.3 bits (126), Expect = 2e-05, Method: Composition-based stats. Identities = 40/256 (15%), Positives = 80/256 (31%), Gaps = 27/256 (10%) Query: 12 HYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYL 71 + YD GR T++ D + + R ++ + L + Y Sbjct: 581 TTRFEYDERGRQTQRIDAL---------GQVERTEWNGYYDLPVAETDPANSRWI---YR 628 Query: 72 YDPLGRRVAKR-------VWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQT 124 YD LG R + R+ + + W+G T D + T Sbjct: 629 YDDLGNLTMTRDPAGFATEYHRDERGLVHTIRDARGGYKFLEWNGRAQLTSYTDCSGKVT 688 Query: 125 IYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEI 184 + + L RV A G+ + ++ + F V ++++ +++ Sbjct: 689 RFAYDARGALARVTDAAGQSTVYETDAMGRVTGIGTADGARQAFFYDVAGRLIEVVDANQ 748 Query: 185 LADRVSEESRRWLASCGLTVEQMQN-------QMDPVYTPARKIHLYHCDHRGLPLALVS 237 + R R L S ++ ++ + R+ + + D R L + Sbjct: 749 RSTRYELNPRGLLLSRTDAANRVVRFGYDDAFRLASLTNENRESYRFQYDRRDLVAEQIG 808 Query: 238 TEGATEWCAEYDEWGN 253 +G EYD G Sbjct: 809 LDGHKRA-YEYDVCGQ 823 Score = 48.6 bits (114), Expect = 4e-04, Method: Composition-based stats. Identities = 49/271 (18%), Positives = 80/271 (29%), Gaps = 35/271 (12%) Query: 11 AHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRY 70 Y ++YDR + E+ L D Y YD + T + +E+RY Sbjct: 791 ESYRFQYDRRDLVAEQIGL---------DGHKRAYEYDVCGQ-----GTIVRDGKIETRY 836 Query: 71 LYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDG------DRLTTIQNDRTRIQT 124 D +GR AK+ + + SR Y +R++ R + Sbjct: 837 ERDAIGRLTAKQATHERCEYL-YDKASRIASAELYTLAARGSSLKNRVSLKYGARGEVLE 895 Query: 125 IYQP-----GSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDR 179 Y P ++ L + T +T + G+ V D Sbjct: 896 EYTPTGWLAHTYDELGNRVSTTISGERTIDWLHYGSGHVHQIRVDGAAVAD----IERDD 951 Query: 180 LESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTE 239 L E+L + S + G Q+ + K Y D G + Sbjct: 952 LHREVLRTQGKLTSHFGYDAVGRRARQLAQRGRAADELLAKQWQY--DAAGDVIQKRDLR 1009 Query: 240 -GATEWCAEYDEWGNLLNEENPHQLQQLIRL 269 G T YD G + P ++ R Sbjct: 1010 YGTT--SYRYDATGRIEQAAGPGLPSEVFRW 1038 >UniRef50_A4FJ21 YD repeat protein n=1 Tax=Saccharopolyspora erythraea NRRL 2338 RepID=A4FJ21_SACEN Length = 1670 Score = 186 bits (471), Expect = 2e-45, Method: Composition-based stats. Identities = 97/392 (24%), Positives = 137/392 (34%), Gaps = 33/392 (8%) Query: 6 RIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQ-----HRLVHYTRTQ 60 RI A YD RL +T G + R+ RY D + RL R Q Sbjct: 1032 RIDDAATAEENYDSEHRLVSQTVTGHSGQLVLA--RSFRYRPDGELIGTDDRLSGSIRYQ 1089 Query: 61 ---------YAEPLVESRYLYDPLGRRV----AKRVWRRERDLTGWMSLSRKPQVTWYGW 107 P Y YD LG + A R G ++ Y Sbjct: 1090 IDRTGRVVEVISPDRRENYQYDGLGNILNAGGAPDAATGPRRYAGNRLVAAGAVQFEYDA 1149 Query: 108 DGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSV 167 G RL + Y S+ L+ V T G L + + + + + G+V Sbjct: 1150 QG-RLVQRIEAGRGWR--YAWDSYDQLVAVTTPEGVLWRYRYDPIGRRIAKQRLAADGAV 1206 Query: 168 VFPPVLVQMLDRLESEILADRVSEES-RRWLASCGLTVEQMQNQMDPVYTPARKIHLYHC 226 V L ++ D + W Q+++ +R+ Sbjct: 1207 AEQVDFVWDGGTLIEQVHTDAQGRRTVTTWEHRPDDDTPVAQHEIG--ADGSRRFFAIVT 1264 Query: 227 DHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEESGLYYNRHR 286 D G P L++ G W WG L + P+ + +R PGQ D E+GL YN HR Sbjct: 1265 DPVGTPTDLIAPNGVLAWHGRTSLWGKELPVQ-PNGVTTPLRFPGQYADAETGLNYNVHR 1323 Query: 287 YYDPLQGRYITQDPIGLKGGWNFYQYPLNPVQYIDSMGLASKYGHLNNGGYGARP----- 341 YYDP GRY++QDP+GL N Y NP D +GLA + G G +P Sbjct: 1324 YYDPATGRYLSQDPLGLAPAPNPVAYVDNPHSAADPLGLAKGGTKRKHDGSGNQPPTTGN 1383 Query: 342 -NKPPTPDPSKLPDIAKQLRLPYPIDQASSAP 372 NK DP + D+ S+ P Sbjct: 1384 GNKRTKKDPWDRKPFSHDTEKKTQADKTSTPP 1415 Score = 96.0 bits (237), Expect = 3e-18, Method: Composition-based stats. Identities = 53/246 (21%), Positives = 83/246 (33%), Gaps = 36/246 (14%) Query: 2 WPDNRIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQY 61 + NR+ + YD GRL + R + R RY +DS +LV T + Sbjct: 1132 YAGNRLVAAGAVQFEYDAQGRLVQ----------RIEAGRGWRYAWDSYDQLVAVTTPEG 1181 Query: 62 AEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRL-----TTIQ 116 V RY YDP+GRR+AK+ + + + + WDG L T Q Sbjct: 1182 ----VLWRYRYDPIGRRIAKQRLAADGAVA---------EQVDFVWDGGTLIEQVHTDAQ 1228 Query: 117 NDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQM 176 RT ++P TP+ + E + + D + + V Sbjct: 1229 GRRTVTTWEHRPDDDTPVAQHEIGADGSRRFFA-IVTDPVGTPTDLIAPNGVLAWHGRTS 1287 Query: 177 LDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRG-----L 231 L E + + V+ R+ + + Y PA D G Sbjct: 1288 LWGKELPVQPNGVT-TPLRFPGQYADAETGLNYNVHRYYDPATG-RYLSQDPLGLAPAPN 1345 Query: 232 PLALVS 237 P+A V Sbjct: 1346 PVAYVD 1351 Score = 57.9 bits (138), Expect = 9e-07, Method: Composition-based stats. Identities = 51/287 (17%), Positives = 88/287 (30%), Gaps = 47/287 (16%) Query: 9 RDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRT--------- 59 + + Y D GR+ E+TD D R RY YD+ +LV Sbjct: 871 QGQTWRYVRDLAGRVVEETDF---------DGRVLRYVYDAAGQLVRSVNGAGEATDYVF 921 Query: 60 -------QYAEPLVESRYLYDPLGRRVA----KRVWRRERDLTGWMSLSRKPQVT-WYGW 107 ++ P + Y Y P+G V V E D G ++ Q T + + Sbjct: 922 DLLGNLVEWRTPSSVTTYTYSPVGHLVRATNDDAVLELELDEQGRITAETVNQRTVAFDY 981 Query: 108 DG-DRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGS 166 D +++ + G+ P+ + G + A + ++ +D + Sbjct: 982 DDTNKVVRRRTPSGVDSAWACDGTSRPIA---LSMGGHSLRYTTGEAGRVARTRIDDAAT 1038 Query: 167 VVFPPVLVQML-DRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYH 225 L + + V S R+ L + Y Sbjct: 1039 AEENYDSEHRLVSQTVTGHSGQLVLARSFRYRPDGELIGTDDRLSGSIR---------YQ 1089 Query: 226 CDHRGLPLALVSTEGATEWCAEYDEWGNLLNEEN-PHQLQQLIRLPG 271 D G + ++S + +YD GN+LN P R G Sbjct: 1090 IDRTGRVVEVISPD--RRENYQYDGLGNILNAGGAPDAATGPRRYAG 1134 Score = 48.3 bits (113), Expect = 7e-04, Method: Composition-based stats. Identities = 48/309 (15%), Positives = 74/309 (23%), Gaps = 79/309 (25%) Query: 14 LYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYLYD 73 Y YD GRL + + R+ YDS RL + RY+YD Sbjct: 555 RYGYDDQGRL---------AAVINSSGKALRFQYDSAGRLTEWQDRNGFW----FRYIYD 601 Query: 74 PLGRRV------------------AKRVWRRERDLTGWM-------------SLSRKPQV 102 GR V +R R D G + + Sbjct: 602 EHGRVVRTVGDKGYFDSQFSYSDDGQRAITRYTDSLGGVKEFEFNAAKQLVREVDALGNT 661 Query: 103 TWYGWD-GDRLTTIQND-RTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSG 160 T WD DRL + + Y LI + ++ + Sbjct: 662 TLSTWDRHDRLLSRTDPLGRTTHYEYDAAGRPWLITRPDGSVVELDLSTDDTVASIIVTD 721 Query: 161 GEDGGSVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARK 220 GE+ + V+ V + R G + + P+ Sbjct: 722 GENTWTRVYAGEAPDPFSGKVGTAPDLDVDDL--RSDRGAGTSEPRSAQPDRPLL----- 774 Query: 221 IHLYHCDHRGLPLALVSTEGATEW--------------------CAEYDEWGNLLNEENP 260 D G P + +G+ YD GN + +P Sbjct: 775 ------DLFGRPREEAAPDGSRIQLGWTVDGHRSWRVDSLGAREQWRYDPEGNQIARIDP 828 Query: 261 HQLQQLIRL 269 Sbjct: 829 MGGVTAAEY 837 Score = 44.0 bits (102), Expect = 0.013, Method: Composition-based stats. Identities = 50/346 (14%), Positives = 85/346 (24%), Gaps = 88/346 (25%) Query: 5 NRIARDAH-----YLYRYDRHGRLTE----KTDLIPEGVIRTDDERT-HRY--------- 45 R+ + Y YD HGR+ K + D +R RY Sbjct: 583 GRLTEWQDRNGFWFRYIYDEHGRVVRTVGDKGYFDSQFSYSDDGQRAITRYTDSLGGVKE 642 Query: 46 ----------------------HYDSQHRLVHYTRTQYAEPLVESRYLYDPLGRRVAKRV 83 +D RL+ T + Y YD GR + Sbjct: 643 FEFNAAKQLVREVDALGNTTLSTWDRHDRLLSRTDPLG----RTTHYEYDAAGR--PWLI 696 Query: 84 WRRERDLTGWMSLSRKPQVTWYGWDGD-----RLTTIQNDRTRIQTIYQPGSFTPLIRVE 138 R + + + + DG+ D + P +R + Sbjct: 697 TRPDGSVVELDLSTDDTVASIIVTDGENTWTRVYAGEAPDPFSGKVGTAPDLDVDDLRSD 756 Query: 139 TATG---ELAKTQRRSLAD---TLQQSGGEDGGSVVFPPVL-VQMLDRLES-----EILA 186 G + R L D ++ DG + + R++S + Sbjct: 757 RGAGTSEPRSAQPDRPLLDLFGRPREEAAPDGSRIQLGWTVDGHRSWRVDSLGAREQWRY 816 Query: 187 DRVSEESRRWLASCGLTVEQ-----------------------MQNQMDPVYTPARKIHL 223 D + R G+T + + ++ V P + Sbjct: 817 DPEGNQIARIDPMGGVTAAEYGPFETELACVDENGARTERTFDTERRLTSVTNPQGQTWR 876 Query: 224 YHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRL 269 Y D G + +G YD G L+ N Sbjct: 877 YVRDLAGRVVEETDFDGRVL-RYVYDAAGQLVRSVNGAGEATDYVF 921 >UniRef50_B4EGW8 RHS-family protein n=9 Tax=Burkholderiaceae RepID=B4EGW8_BURCJ Length = 1515 Score = 186 bits (471), Expect = 2e-45, Method: Composition-based stats. Identities = 104/455 (22%), Positives = 166/455 (36%), Gaps = 80/455 (17%) Query: 3 PDNRIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTH------------RYHYDSQ 50 P + + +Y YD G+L E+ D + + DER + YD+ Sbjct: 1053 PARALEQLTRQVYHYDAAGQL-ERVDTGADTLTYQRDERGQIICAESLLQPSEHFRYDAV 1111 Query: 51 HRLV-----------HYTRTQYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRK 99 + HY R E + +RY YD GR + K V + + Sbjct: 1112 MNIAAHGQRAPVDAHHYRRGGLPEQVGYARYKYDARGRTIEKTVEQ----------PGVR 1161 Query: 100 PQVTWYGWDG-DRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQ 158 P+ Y WDG +RL + R Y+ +F R+E QQ Sbjct: 1162 PKTWQYTWDGLNRLVRVVTPE-RGVWAYRYDAFNR--RIEK-----------------QQ 1201 Query: 159 SGGEDGGSVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPA 218 GG + ++ ++ + D + + W G + Q D ++ Sbjct: 1202 VGGRETVKFLWDGPMLAERWIEQ----RDGTTGQVVTWHIEPGSFLPLAQETDDGLFP-- 1255 Query: 219 RKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENP--------HQLQQLIRLP 270 D G P + +G W A Y WG LL + P + +R Sbjct: 1256 -----ILTDQIGRPKTVFDEQGRPVWKAAYSLWGKLLPVKRPANDADCGATSIDTTLRFS 1310 Query: 271 GQQYDEESGLYYNRHRYYDPLQGRYITQDPIGLKGGWNFYQYPLNPVQYIDSMGL----- 325 GQ D+E+GL YN +RYYDP G+Y++ DPIGL GG Y +P Q+ID +GL Sbjct: 1311 GQWADDETGLNYNLNRYYDPDSGQYLSADPIGLLGGARTQAYVHDPSQWIDPLGLQGCKP 1370 Query: 326 ASKYGHLNNGGYGARPNKPPTPDPSKLPDIAKQLRLPYPIDQASSAPNVFKTFFRALSPY 385 A K + Y T D + ++A + R + T ++ + Sbjct: 1371 AGKKISMRAYRYEMPERFDTTWD-AHEWNVAARHRYTKKGLGGVYGADSPATALAEVTHW 1429 Query: 386 DYTLYCRKWVKPNLTCTPQDDSQYPGMDTKTASDY 420 D L R+ + ++T D P + +TA+ Sbjct: 1430 DVDLSTRELISKDVTLNNVLDLTDPSVRKQTAAAM 1464 Score = 75.6 bits (184), Expect = 3e-12, Method: Composition-based stats. Identities = 52/272 (19%), Positives = 82/272 (30%), Gaps = 38/272 (13%) Query: 11 AHYLYRYDRHGRLT-------EKTDLIPEGVIRT-----DDERTHRYHYDSQHRLVHYTR 58 Y YRYD GRL T+ + V R D RY YD+ RL+ Sbjct: 862 ETYTYRYDAAGRLAAEIDWGGRATEYDRDAVGRLLTKTLPDGGQWRYTYDASDRLIEIDA 921 Query: 59 TQYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGD-RLTTIQN 117 V+ Y YD GR + V VT + +D + RL Sbjct: 922 GD-----VKLAYRYDASGRLASAEV------------QGEHTHVTRFAYDRNGRLIGEDQ 964 Query: 118 DRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQML 177 ++ +Y L T T ++ L Q G + + Sbjct: 965 HGELLRHVYDADGQRRL----RMTPRRETTYAYDVSGALTQVGQLTIRRDGLGREIGREA 1020 Query: 178 DRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVS 237 ++ D + R+ + + R++ YH D G + Sbjct: 1021 GDFVAQQQYDALGRIRRQIAGPAVAFDALQADPARALEQLTRQV--YHYDAAGQLERV-- 1076 Query: 238 TEGATEWCAEYDEWGNLLNEENPHQLQQLIRL 269 GA + DE G ++ E+ Q + R Sbjct: 1077 DTGADTLTYQRDERGQIICAESLLQPSEHFRY 1108 Score = 55.6 bits (132), Expect = 4e-06, Method: Composition-based stats. Identities = 50/284 (17%), Positives = 83/284 (29%), Gaps = 45/284 (15%) Query: 9 RDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVES 68 + + Y YD HG +T+ R D+ RY YD+ R+V Q Sbjct: 544 QFGQFYYAYDEHGWMTQ---------WRDTDQTDVRYRYDTAGRVVETGTRQGYHTG--- 591 Query: 69 RYLYDPLGRRV----AKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQT 124 R++Y+ RV + + + T+ W+ RL + R +T Sbjct: 592 RFIYEAGCTRVIDVDGEWTYAYNDEGLVTAETDPLGHCTYSEWELGRLMARIDPLGR-RT 650 Query: 125 IYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQML------- 177 Y+ L V ++G L + +GG++ + L Sbjct: 651 DYRYDERGQLTSVVESSGRTVDFDYDDE-QRLTGARLPNGGTIKLEYDHLSRLIARTEPD 709 Query: 178 -------DRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRG 230 E+L + R L + ++ + RKI D G Sbjct: 710 GNKTTYRYGPRGELLRVVQGDRETRLDYDDRLRLTDIELPTGARFR--RKI-----DALG 762 Query: 231 LPLALVSTEGATEWCAEYD-----EWGNLLNEENPHQLQQLIRL 269 L S +G +Y G L P R Sbjct: 763 RLLEETSPDGHVT-RYDYADGPANPRGLLSAVTRPDGSVSRARY 805 Score = 54.8 bits (130), Expect = 6e-06, Method: Composition-based stats. Identities = 44/301 (14%), Positives = 77/301 (25%), Gaps = 35/301 (11%) Query: 6 RIARDAHYLYRYDRHGRLTEKTDLIPEGVIR----------TDDERTHRYHYDSQHRLVH 55 R YRYD GR+ E R D + Y Y+ + + Sbjct: 562 RDTDQTDVRYRYDTAGRVVETGTRQGYHTGRFIYEAGCTRVIDVDGEWTYAYNDEGLVTA 621 Query: 56 YTRTQYAEPLVESR-----YLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGD 110 T E DPLGRR +R + + + + +D + Sbjct: 622 ETDPLGHCTYSEWELGRLMARIDPLGRRTD---YRYDERGQLTSVVESSGRTVDFDYDDE 678 Query: 111 RLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFP 170 + T + + LI G + + L+ G+ + + Sbjct: 679 QRLTGARLPNGGTIKLEYDHLSRLIARTEPDGNKTTYRYGPRGELLRVVQGDRETRLDYD 738 Query: 171 PVLVQMLDRLESEILADRVSEESRRWL-----------ASCGLTVEQMQNQMDPVYTPAR 219 L L + R + R L + + V P Sbjct: 739 DRLRLTDIELPTGARFRRKIDALGRLLEETSPDGHVTRYDYADGPANPRGLLSAVTRPDG 798 Query: 220 KIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEESG 279 + + LP+ + G T Y + L + +YD + Sbjct: 799 SVSRARYNSESLPVEWIDPLGRTIQR-TYGPFDLLTASIDAAGHATRF-----EYDHATR 852 Query: 280 L 280 L Sbjct: 853 L 853 Score = 52.5 bits (124), Expect = 3e-05, Method: Composition-based stats. Identities = 57/313 (18%), Positives = 92/313 (29%), Gaps = 45/313 (14%) Query: 6 RIARDAHYLYRYDRHGRLTEKTDLIPEGVIRT-----------DDERTHRYHYDSQHRLV 54 R+ YD RL +T+ +R R YD + RL Sbjct: 685 RLPNGGTIKLEYDHLSRLIARTEPDGNKTTYRYGPRGELLRVVQGDRETRLDYDDRLRLT 744 Query: 55 HYTRTQYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTT 114 A R D LGR + + + P+ G Sbjct: 745 DIELPTGA----RFRRKIDALGRLLEETSPDGHVTRYDYADGPANPR-------GLLSAV 793 Query: 115 IQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLV 174 + D + + Y S P+ ++ + +T D L S G + F Sbjct: 794 TRPDGSVSRARYNSESL-PVEWIDPLGRTIQRTYGPF--DLLTASIDAAGHATRFEYDHA 850 Query: 175 QMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLA 234 L ++++ + R+ A+ L E Y D G L Sbjct: 851 TRL----TKVINALGETYTYRYDAAGRLAAEIDWGGRATEYDR---------DAVGRLLT 897 Query: 235 LVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRL--PGQQYDEE-SGLYYNRHRY-YDP 290 +G W YD L+ E + ++ R G+ E G + + R+ YD Sbjct: 898 KTLPDGGQ-WRYTYDASDRLI-EIDAGDVKLAYRYDASGRLASAEVQGEHTHVTRFAYD- 954 Query: 291 LQGRYITQDPIGL 303 GR I +D G Sbjct: 955 RNGRLIGEDQHGE 967 >UniRef50_B2TKH9 YD repeat protein n=1 Tax=Clostridium botulinum B str. Eklund 17B RepID=B2TKH9_CLOBB Length = 2634 Score = 186 bits (471), Expect = 2e-45, Method: Composition-based stats. Identities = 74/369 (20%), Positives = 139/369 (37%), Gaps = 34/369 (9%) Query: 12 HYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYL 71 Y Y YD +G +K + + Y YDS +RLV + E + Sbjct: 2112 DYKYAYDLNGSRLQKVS----------SKHKNFYSYDSMNRLVGSSYDDRCE-----SFT 2156 Query: 72 YDPLGRRVAKRVWRRERDL-----TGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTIY 126 YD +G R++K L K V ++ +D + TI+ + T I+ Sbjct: 2157 YDKVGNRLSKTTNDITEKYVYNVKNQLKELHNKNGVNYFTYD-KQGNTIKEETTTGNNIF 2215 Query: 127 QPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILA 186 + + ++ T G ++ + + E +F + +E++ Sbjct: 2216 EYNTLNQAVKAITKEGNTLVSRYDTEDLRTEIEENEKLSKFIFNKNGDIL---VETDSDN 2272 Query: 187 DRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWCA 246 + +S+ +R + ++ + ++ + + Y D +G ++ Sbjct: 2273 NVISKFTRGYEIVAAEIADKTNSSINYSLSR----YYYCVDEQGSTAFIIDENQKVRNEY 2328 Query: 247 EYDEWGNLLNEENPHQLQQLIRLPGQQYDEESGLYYNRHRYYDPLQGRYITQDPIGLKGG 306 YD +GN+L ++ ++ I GQQ+D + YY R RYY+P+ GR+ +D + G Sbjct: 2329 YYDAFGNVL--DSREEVHNRITYTGQQFDGITQQYYLRARYYNPVIGRFTQED-VYRGDG 2385 Query: 307 WNFYQYP-LNPVQYIDSMGLASKY--GHLNNGGYGARPNKPPTPDPSKLPDIAKQLRLPY 363 N Y Y NPV+Y D G + NN + D +KL + + Sbjct: 2386 LNLYAYCGNNPVRYYDPSGYIKDWVTPKNNNDLLNIYSSNMSQADKNKLLGVDIIEVEKF 2445 Query: 364 PIDQASSAP 372 I+ P Sbjct: 2446 DIENFIKNP 2454 Score = 62.9 bits (151), Expect = 2e-08, Method: Composition-based stats. Identities = 43/295 (14%), Positives = 88/295 (29%), Gaps = 50/295 (16%) Query: 10 DAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESR 69 + Y YD++G LT+ +++ YD R++ + SR Sbjct: 1547 WSITKYEYDKNGNLTKIITPKGYEIVKV---------YDEIDRIIEEHEKDETNNIFRSR 1597 Query: 70 -YLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRT-------- 120 Y YD ++ + E S + + +D D L +N + Sbjct: 1598 VYAYDKANNIISINEYSGEEAKLINSKYSSE-----FNYDLDILKRYENKKENEKLLKEL 1652 Query: 121 -----RIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQ 175 + + Y S L +G A+ ++Q + V Sbjct: 1653 DFKIDKRKKNYTYDSQNRLTHFTNVSGNTARLFYDKNDRIIKQVLPKQYDETKDNGVGTT 1712 Query: 176 MLDRLESEI------LADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKI-------- 221 ++ ++ L + V++ + + +V+ N+++ YT +I Sbjct: 1713 YKYNIKGQVVEVKNALGETVTKNTYDPKGNLKTSVDGENNKVEYTYTLLGQIKDVVTPNS 1772 Query: 222 -------HLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRL 269 Y D RG + G D+WG ++ P + Sbjct: 1773 KKEERLAQSYKYDARGNITGITDGNGNET-SYLLDDWGRIIQITTPEGGIEKYTY 1826 Score = 59.0 bits (141), Expect = 3e-07, Method: Composition-based stats. Identities = 43/313 (13%), Positives = 85/313 (27%), Gaps = 55/313 (17%) Query: 8 ARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVE 67 + YD+ RL E D RY YD + ++ + Sbjct: 1464 NNYNEIYFTYDKENRLIEVKDKCGAKA---------RYKYDCLNNKIYESFKINDTTNKI 1514 Query: 68 SRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTI------------ 115 Y+YD +G + K+ + ++ +T Y +D + T Sbjct: 1515 IHYVYDKVGNLIEKKEEIDGKFISSKNKGKNIWSITKYEYDKNGNLTKIITPKGYEIVKV 1574 Query: 116 --------------QNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGG 161 + + +Y +I + +GE AK S + Sbjct: 1575 YDEIDRIIEEHEKDETNNIFRSRVYAYDKANNIISINEYSGEEAKLI-NSKYSSEFNYDL 1633 Query: 162 EDGGSVVFPPVLVQMLDRLESEIL-----------------ADRVSEESRRWLASCGLTV 204 + ++L L+ +I + +R + + Sbjct: 1634 DILKRYENKKENEKLLKELDFKIDKRKKNYTYDSQNRLTHFTNVSGNTARLFYDKNDRII 1693 Query: 205 EQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQ 264 +Q+ + Y + +G + + + G T YD GNL + + Sbjct: 1694 KQVLPKQYDETKDNGVGTTYKYNIKGQVVEVKNALGETVTKNTYDPKGNLKTSVDGENNK 1753 Query: 265 QLIRLP--GQQYD 275 GQ D Sbjct: 1754 VEYTYTLLGQIKD 1766 Score = 57.5 bits (137), Expect = 1e-06, Method: Composition-based stats. Identities = 49/306 (16%), Positives = 92/306 (30%), Gaps = 47/306 (15%) Query: 6 RIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQY---- 61 R L+ YD G L EK I G +T Y YDS R+ Sbjct: 1099 RDNLGKEILFTYDNKGNLLEKKTKISVGEY-----KTESYTYDSYGRITAKVDGNGNISN 1153 Query: 62 ---------------------AEPLVESRYLYDPLGRRVAKRV--------WRRERDLTG 92 + Y YD +GR + + ++ Sbjct: 1154 YEYDSGSFIEGKKGKDPVRVITNSGYDYEYEYDEVGRNTSISTDYGTIEFGYNNLDYVSK 1213 Query: 93 WMSLSRKPQVTWYGWDGDR------LTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAK 146 + + +Y G+ + N + Y+ LI ++ G + K Sbjct: 1214 IKDGNGNVTLKYYDKMGNLISIYTPNACLNNKQNGQGYYYKYDHMDRLISIKNPLGIIDK 1273 Query: 147 TQRRSLADTLQQ-SGGEDGGSVVFPPVLVQMLDRLESEILADRVSEESRRWLA-SCGLTV 204 + R S + +++ + + + D+ +I + R+ + G + Sbjct: 1274 SIRDSEGNIIKEINPNYYDDKTDNGLGIEHVYDKDNRKIKTIYLDGGIERFYYDANGNVI 1333 Query: 205 EQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTE-GATEWCAEYDEWGNLLNEENPHQL 263 + + T Y D ++ + E G TE EYD GN++ E + + Sbjct: 1334 RHISPEYYNKETDNGTGFSYTYDSMNKLTSIYNEETGITEKTFEYDLHGNIIKEIDNDKN 1393 Query: 264 QQLIRL 269 L + Sbjct: 1394 ATLFKY 1399 Score = 54.0 bits (128), Expect = 1e-05, Method: Composition-based stats. Identities = 45/290 (15%), Positives = 86/290 (29%), Gaps = 41/290 (14%) Query: 15 YRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYLYDP 74 Y YD L + D + + ++ + YD++ L+ Y YD Sbjct: 1087 YVYDEEQNLLNERDNLGKEIL---------FTYDNKGNLLEKKTKISVGEYKTESYTYDS 1137 Query: 75 LGRRVAK---------RVWRRERDLTGWMSLSRKPQVTWYGWDGD-------RLTTIQND 118 GR AK + + G +T G+D + R T+I D Sbjct: 1138 YGRITAKVDGNGNISNYEYDSGSFIEGKKGKDPVRVITNSGYDYEYEYDEVGRNTSISTD 1197 Query: 119 RTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQM-- 176 I+ Y + + +++ G + + + + + Sbjct: 1198 YGTIEFGY--NNLDYVSKIKDGNGNVTLKYYDKMGNLISIYTPNACLNNKQNGQGYYYKY 1255 Query: 177 --LDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLA 234 +DRL S + ++S R + D H+Y D + Sbjct: 1256 DHMDRLISIKNPLGIIDKSIRDSEGNIIKEINPNYYDDKTDNGLGIEHVYDKD--NRKIK 1313 Query: 235 LVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEESGLYYNR 284 + +G YD GN++ +P ++ D +G Y Sbjct: 1314 TIYLDGGI-ERFYYDANGNVIRHISPE-------YYNKETDNGTGFSYTY 1355 Score = 49.0 bits (115), Expect = 4e-04, Method: Composition-based stats. Identities = 48/310 (15%), Positives = 89/310 (28%), Gaps = 51/310 (16%) Query: 4 DNR----IARDAHY-LYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTR 58 DNR I D + YD +G + + TD+ Y YDS ++L Sbjct: 1308 DNRKIKTIYLDGGIERFYYDANGNVI-RHISPEYYNKETDNGTGFSYTYDSMNKLTSIYN 1366 Query: 59 TQYAEPLVESRY-------------------LYDPLGRRVAKRVWRRERDLTGWMSLSRK 99 + Y YD + K V D+ S Sbjct: 1367 EETGITEKTFEYDLHGNIIKEIDNDKNATLFKYDLANNLIEKNVPVEIIDIDSNESADNN 1426 Query: 100 P-------QVTWYGWD--GDRLTTIQNDRT----RIQTIYQPGSFTPLIRVETATGELAK 146 QVT Y +D G+++ I Y FT E Sbjct: 1427 NLESKTKYQVTSYCYDKNGNKILEKHGIDAIFEDEICNNYNEIYFTYD-------KENRL 1479 Query: 147 TQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQ 206 + + + + + ++ + + D+V + G + Sbjct: 1480 IEVKDKCGAKARYKYDCLNNKIYESFKINDTTNKIIHYVYDKVGNLIEKKEEIDGKFISS 1539 Query: 207 MQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQL 266 +N+ +++ + Y D G +++ +G YDE ++ E + + Sbjct: 1540 -KNKGKNIWSITK----YEYDKNGNLTKIITPKGYEIVK-VYDEIDRIIEEHEKDETNNI 1593 Query: 267 IRLPGQQYDE 276 R YD+ Sbjct: 1594 FRSRVYAYDK 1603 Score = 43.3 bits (100), Expect = 0.020, Method: Composition-based stats. Identities = 29/140 (20%), Positives = 44/140 (31%), Gaps = 31/140 (22%) Query: 5 NRIARDAHYLYRYDRHGRLTE---------KTDLIPEGVI-----------RTDDERTHR 44 N Y Y+YD RL K+ EG I +TD+ Sbjct: 1243 NNKQNGQGYYYKYDHMDRLISIKNPLGIIDKSIRDSEGNIIKEINPNYYDDKTDNGLGIE 1302 Query: 45 YHYDSQHRLVHYTRTQYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTW 104 + YD +R + R+ YD G + T + Sbjct: 1303 HVYDKDNRKIKTIYLDGG----IERFYYDANGNVIRHISPEYYNKETDNGTG------FS 1352 Query: 105 YGWDG-DRLTTIQNDRTRIQ 123 Y +D ++LT+I N+ T I Sbjct: 1353 YTYDSMNKLTSIYNEETGIT 1372 >UniRef50_UPI0001AF2680 RHS/YD repeat-containing protein n=1 Tax=Streptomyces roseosporus NRRL 11379 RepID=UPI0001AF2680 Length = 1592 Score = 185 bits (468), Expect = 4e-45, Method: Composition-based stats. Identities = 87/360 (24%), Positives = 115/360 (31%), Gaps = 63/360 (17%) Query: 4 DNRIARDAHYLYRYDRH---------GRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLV 54 R Y YR D H G T D + T RY YD+ Sbjct: 1125 GGRAVNSRSYTYRPDGHLTALTDGLSGTRTFDLDAVGRVTTVHARGWTERYVYDADGNQA 1184 Query: 55 HYTRTQYAEPLVE------------------------SRYLYDPLGRRVAKRVWRRERDL 90 + Y YD LGR +R R Sbjct: 1185 EAAWPAGHPGGGGAGHPGGDGAGPRSYAGTKLVRAGGTHYEYDALGRVTLRRKTR----- 1239 Query: 91 TGWMSLSRKPQVTWYGWDG-DRLTTIQN-DRTRIQTIYQPGSFTPLIRVETATGELAKTQ 148 LSRKP Y WD +RL+++ D TR + Y P + ++ GE + Sbjct: 1240 -----LSRKPDTWQYAWDAENRLSSVTTPDGTRWRYRYDPLGRRTAKQRLSSDGESVVEE 1294 Query: 149 RRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQ 208 R D L + P +V D LA E++ Sbjct: 1295 VRFAWDGLTLCEQTAREPGL-PNTVVLTWDHRAGVPLAQT----------------ERII 1337 Query: 209 NQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIR 268 R+ D G P LV G W + WG +R Sbjct: 1338 TADTRQEEVDRRFFAIATDLVGAPTELVDPSGDIAWRSRTTLWGATAWPRTSTAYT-PLR 1396 Query: 269 LPGQQYDEESGLYYNRHRYYDPLQGRYITQDPIGLKGGWNFYQYPLNPVQYIDSMGLASK 328 PGQ D E+GL+YN R+YDP RY++ DP+GL G N Y NP + D +GL K Sbjct: 1397 FPGQYDDPETGLHYNFFRHYDPDAARYVSPDPLGLAAGPNPVAYVDNPFTWCDPLGLMPK 1456 Score = 54.0 bits (128), Expect = 1e-05, Method: Composition-based stats. Identities = 47/262 (17%), Positives = 74/262 (28%), Gaps = 29/262 (11%) Query: 9 RDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVES 68 R + Y YD GR +TD D RT Y YD+ +L T+ Sbjct: 939 RGMTWTYVYDAAGRTVAETDF---------DGRTVSYGYDAAGQL----STRTDALGQTI 985 Query: 69 RYLYDPLGRRVAK----RVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQT 124 + D LGR + K RV D G + + P + + DR ++ + Sbjct: 986 SFKRDQLGRVIEKDADGRVTTYAYDQAGRLLHATGPD-SELLYQYDRRGQVKAELVDGYA 1044 Query: 125 I-YQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESE 183 + Y + R T TG++ S + G+ + Sbjct: 1045 MTYAYDALGRRTRRTTPTGQVTTYAYDSGGRPEHLTAGDHRIGFAHDVAGRETSRVFGDT 1104 Query: 184 ILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHR-GLPLALVSTEGAT 242 + + + R + N Y P + D G + G Sbjct: 1105 LTLTSTWDAAGRLATENLTVGGRAVNSRSYTYRPDGHLTAL-TDGLSGTRTFDLDAVGRV 1163 Query: 243 E------W--CAEYDEWGNLLN 256 W YD GN Sbjct: 1164 TTVHARGWTERYVYDADGNQAE 1185 Score = 52.5 bits (124), Expect = 3e-05, Method: Composition-based stats. Identities = 51/281 (18%), Positives = 72/281 (25%), Gaps = 43/281 (15%) Query: 12 HYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQH-----------RLV-----H 55 + YDRHGRL +TD + RT + YD Q RL Sbjct: 711 TTRFTYDRHGRLLTRTDPL---------GRTTSFTYDEQGHPHTVTQPDGSRLTTTRDAS 761 Query: 56 YTRTQYAEPLVESRYL-YDPLGRRVAKRVWRRERDLTGWMSLSRK-------PQVTWYGW 107 RT+ P R +D G A R VT Sbjct: 762 ERRTETRGPDGARRLQEFDERGNLTALTDAAGHTTRWLVDPYGRTTSVTDALGAVTTVRC 821 Query: 108 DGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQ--------RRSLADTLQQS 159 D + D T+ + F + A G + + RR + +S Sbjct: 822 DAAGMPMEVTDPAGATTVVRRDVFGRPAHITDAAGGTTRLEWDADGRLARRVAPGGVTES 881 Query: 160 GGEDGGSVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPAR 219 DG D + + + Q+ V P Sbjct: 882 WTYDGEGNCLTYTDPAGGVSSFEYTHFDLPAARTH-PDGARYTFRYDAHLQLTHVVNPRG 940 Query: 220 KIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENP 260 Y D G +A +G T YD G L + Sbjct: 941 MTWTYVYDAAGRTVAETDFDGRTV-SYGYDAAGQLSTRTDA 980 Score = 50.6 bits (119), Expect = 1e-04, Method: Composition-based stats. Identities = 52/292 (17%), Positives = 81/292 (27%), Gaps = 41/292 (14%) Query: 12 HYLYRYDRHGRLTEK-------------TDLIPEGVIR-----TDDERTHRYHYDSQHRL 53 Y Y YD H R+ +D P R T D T R+ D+ R+ Sbjct: 642 RYTYAYDEHDRVVSAGGEAGHVALTLAYSDPAPGTGHRVTTLTTADGHTTRHLIDAGCRV 701 Query: 54 VHYTRTQYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLT 113 + T +R+ YD GR + + + VT DG RLT Sbjct: 702 LSTTDPLGH----TTRFTYDRHGRLLTRTDPLGRTTSFTYDEQGHPHTVTQ--PDGSRLT 755 Query: 114 TIQNDRTRIQTIYQPGSFTPLIRVETA------TGELAKTQRRSLADTLQQSGGEDGGSV 167 T ++ R P L + T T R + + + D Sbjct: 756 TTRDASERRTETRGPDGARRLQEFDERGNLTALTDAAGHTTRWLVDPYGRTTSVTDALGA 815 Query: 168 VFP--------PVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQ--MQNQMDPVYTP 217 V P+ V + + D + A+ G T + ++ P Sbjct: 816 VTTVRCDAAGMPMEVTDPAGATTVVRRDVFGRPAHITDAAGGTTRLEWDADGRLARRVAP 875 Query: 218 ARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRL 269 + D G L G EY + +P + R Sbjct: 876 GGVTESWTYDGEGNCLTYTDPAGG-VSSFEYTHFDLPAARTHPDGARYTFRY 926 Score = 50.2 bits (118), Expect = 2e-04, Method: Composition-based stats. Identities = 52/335 (15%), Positives = 83/335 (24%), Gaps = 81/335 (24%) Query: 15 YRYDRHGRLTEKTDLIPEGV-----------IRTDDERTHRYHYDSQHRLVHYTRTQYA- 62 Y YD G+L+ +TD + + + + D R Y YD RL+H T Sbjct: 966 YGYDAAGQLSTRTDALGQTISFKRDQLGRVIEKDADGRVTTYAYDQAGRLLHATGPDSEL 1025 Query: 63 --------------EPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTW---- 104 Y YD LGRR + + + S R +T Sbjct: 1026 LYQYDRRGQVKAELVDGYAMTYAYDALGRRTRRTTPTGQVTTYAYDSGGRPEHLTAGDHR 1085 Query: 105 --YGWD----------GDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSL 152 + D GD LT + + + + +L Sbjct: 1086 IGFAHDVAGRETSRVFGDTLTLTSTWDAAGRLATENLTVGGRAVNSRSYTYRPDGHLTAL 1145 Query: 153 ADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSEES--------RRWLASCGLTV 204 D L + D +V + AD E+ G Sbjct: 1146 TDGLSGTRTFDLDAVGRVTTVHARGWTERYVYDADGNQAEAAWPAGHPGGGGAGHPGGDG 1205 Query: 205 EQMQNQMDPVYTPARKIHLYHCDHRGLPLA-------------------------LVSTE 239 ++ A H Y D G + + + Sbjct: 1206 AGPRSYAGTKLVRAGGTH-YEYDALGRVTLRRKTRLSRKPDTWQYAWDAENRLSSVTTPD 1264 Query: 240 GATEWCAEYDEWGNLLN----EENPHQLQQLIRLP 270 G T W YD G + + + +R Sbjct: 1265 G-TRWRYRYDPLGRRTAKQRLSSDGESVVEEVRFA 1298 Score = 49.4 bits (116), Expect = 3e-04, Method: Composition-based stats. Identities = 38/257 (14%), Positives = 65/257 (25%), Gaps = 25/257 (9%) Query: 33 GVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYLYDPLGRRVAKRVWRRERDLTG 92 + + YD HR + + + Y YD R V+ LT Sbjct: 612 TTVAQPSGSALTFAYDEAHRTTAWIDSNGS----RYTYAYDEHDRVVSAGGEAGHVALTL 667 Query: 93 WMS----LSRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQ 148 S + T DG + + R+ + P T + L +T Sbjct: 668 AYSDPAPGTGHRVTTLTTADGHTTRHLIDAGCRVLSTTDPLGHTTRFTYDRHGRLLTRTD 727 Query: 149 RRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVS----------EESRRWLA 198 + +V P R SE + +E A Sbjct: 728 PLGRTTSFTYDEQGHPHTVTQPDGSRLTTTRDASERRTETRGPDGARRLQEFDERGNLTA 787 Query: 199 SCGLTVEQMQNQMDPVYTPA------RKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWG 252 + +DP + CD G+P+ + GAT D +G Sbjct: 788 LTDAAGHTTRWLVDPYGRTTSVTDALGAVTTVRCDAAGMPMEVTDPAGATTVVRR-DVFG 846 Query: 253 NLLNEENPHQLQQLIRL 269 + + + Sbjct: 847 RPAHITDAAGGTTRLEW 863 Score = 44.0 bits (102), Expect = 0.012, Method: Composition-based stats. Identities = 37/238 (15%), Positives = 66/238 (27%), Gaps = 20/238 (8%) Query: 11 AHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRY 70 +D GRL + T + YD + T T A + Y Sbjct: 857 GTTRLEWDADGRLARRV---------APGGVTESWTYDGEGN--CLTYTDPAGGVSSFEY 905 Query: 71 LY-DPLGRRV----AKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTI 125 + D R A+ +R + L ++ + Y +D T + D Sbjct: 906 THFDLPAARTHPDGARYTFRYDAHLQLTHVVNPRGMTWTYVYDAAGRTVAETDFDGRTVS 965 Query: 126 YQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLV---QMLDRLES 182 Y + L A G+ +R L +++ + + E Sbjct: 966 YGYDAAGQLSTRTDALGQTISFKRDQLGRVIEKDADGRVTTYAYDQAGRLLHATGPDSEL 1025 Query: 183 EILADRVSEESRRWLASCGLTVEQMQNQ-MDPVYTPARKIHLYHCDHRGLPLALVSTE 239 DR + + +T TP ++ Y D G P L + + Sbjct: 1026 LYQYDRRGQVKAELVDGYAMTYAYDALGRRTRRTTPTGQVTTYAYDSGGRPEHLTAGD 1083 >UniRef50_C7Q0B8 YD repeat protein n=1 Tax=Catenulispora acidiphila DSM 44928 RepID=C7Q0B8_CATAD Length = 1489 Score = 185 bits (468), Expect = 5e-45, Method: Composition-based stats. Identities = 86/380 (22%), Positives = 137/380 (36%), Gaps = 49/380 (12%) Query: 6 RIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPL 65 R R + + GR+ + Y YD+ L T +Q +E + Sbjct: 1075 RDVRTGTRRFELTKAGRV----------AGVQAEGWHESYAYDALGNL-ASTNSQNSESV 1123 Query: 66 VESR------------YLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDG-DRL 112 V Y +D +GR V+K LS + Y WD +RL Sbjct: 1124 VYVHDGTLISSAGRTVYRHDAMGRVVSKTR----------RLLSGGTKTWDYRWDARNRL 1173 Query: 113 TTIQND-RTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPP 171 + Y P + G++ S+A+ ++ + + + V Sbjct: 1174 VAARTPENVVWTYQYDP--------LGRRVGKVRLNGDGSVAEQIRFTWDKTRLAAVTAA 1225 Query: 172 VLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGL 231 + +++ + A + + PV L D G Sbjct: 1226 DGTVTTWDYLPDTFT-PIAQHTHTPAAGSVDPDVAVTYDVAPVSASEPDFALVVTDPVGT 1284 Query: 232 PLALVSTEGATEWCAEY-DEWGNLLNEENPHQLQQLIRLPGQQYDEESGLYYNRHRYYDP 290 P LVS +G W WG + P + +R PGQ +D E+GL+YN +RYYDP Sbjct: 1285 PTELVSADGHVVWQQRRASIWGLPADIVPPDADEFPLRFPGQYHDSETGLHYNLNRYYDP 1344 Query: 291 LQGRYITQDPIGLKGGWNFYQYPLNPVQYIDSMGLASKYGHLNNGGYGARPNKPPTPDPS 350 Y+T DP+GL+ N Y Y NP+ D +GL G+ GG G+ N P S Sbjct: 1345 EAAAYLTPDPLGLEPAPNQYGYVGNPLADSDPLGLYPASGN-ARGGNGSNENVMPK---S 1400 Query: 351 KLPDIAKQLRLPYPIDQASS 370 + D+AK L + ++ Sbjct: 1401 QADDVAKYLGYKKTKEMSAG 1420 Score = 63.7 bits (153), Expect = 1e-08, Method: Composition-based stats. Identities = 62/313 (19%), Positives = 97/313 (30%), Gaps = 88/313 (28%) Query: 15 YRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYLYDP 74 + YD GRL+ D + + +Y +D Q+R+ + ++ Y YD Sbjct: 537 FGYDERGRLSRVMD---------PEGNSLQYSWDEQNRITGWQDRLG----MDYHYTYDE 583 Query: 75 LGRRVAKRVWRRERDLTGWMSLSRKPQVTWYG-WDGDRLTTIQNDRTRIQTIYQPGSFTP 133 GR V + LT + + T DG+ ++R RI + P Sbjct: 584 RGRVVHGQ--GNHGFLTASFDYHDEERFTLVTDSDGNVTRYGYDERGRIVAVTDPAGNVE 641 Query: 134 LIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSEES 193 L ++ +L+ A T ++ G L ++ ++AD +E + Sbjct: 642 LRELDRYGNQLSVVDEMGRATTFERDG----------------LGQVLRSVMADG-AETT 684 Query: 194 RRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGN 253 W A GLP + GA W YD G Sbjct: 685 TTWAAP------------------------------GLPEQITDAIGA-VWQYSYDAMGR 713 Query: 254 LLNEENPHQLQQLIRLPGQQYDEESGLYYNRHRYYDPLQGRYITQ--DPIGLKGGWNFYQ 311 L E +P Y R DP G IT D +GL Sbjct: 714 LATETDPLGAVTSYEYTANGYLS---------RMTDP-AGHAITVECDAVGL-------- 755 Query: 312 YPLNPVQYIDSMG 324 PV+ +D G Sbjct: 756 ----PVRVMDPDG 764 Score = 55.6 bits (132), Expect = 4e-06, Method: Composition-based stats. Identities = 53/287 (18%), Positives = 78/287 (27%), Gaps = 44/287 (15%) Query: 8 ARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAE---- 63 A A Y + YD RLT T RY Y+ LV T Sbjct: 846 ADGAAYRFAYDGQMRLTTVTG---------PTGAAWRYEYNPVGHLVAETDFNGRRIDYE 896 Query: 64 -------------PLVESRYLYDPLGRRVAK----RVWRRERDLTGWMSLSRKPQV---T 103 ++L+DP+GR +A V R D G M + P Sbjct: 897 RDAVGQMTVLSQAEGRRQQFLHDPVGRVLAMDADGDVTRYSFDAAGRMIAATAPGTELSR 956 Query: 104 WYGWDGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGED 163 Y G RL T D + Y +R+ + L SG E Sbjct: 957 TYDAVG-RLVTETVDGHAVSYRYDAAGRAAGLRLSQGHEASWEFSPGGALTRLSSSGHE- 1014 Query: 164 GGSVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHL 223 + + ++ R + + R A D Y+P + Sbjct: 1015 -IAFTTDAAGRATGWVADRKLSMTRGFDAAGRLAAQRVTFGTSALVARDFAYSPTDLLSE 1073 Query: 224 YHCDHRGLPLALVSTEGATE------WC--AEYDEWGNLLNEENPHQ 262 G ++ G W YD GNL + + + Sbjct: 1074 IRDVRTGTRRFELTKAGRVAGVQAEGWHESYAYDALGNLASTNSQNS 1120 Score = 52.1 bits (123), Expect = 4e-05, Method: Composition-based stats. Identities = 52/293 (17%), Positives = 87/293 (29%), Gaps = 50/293 (17%) Query: 14 LYRYDRHGRLTEKT----------DLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAE 63 Y +D GR+ T D + V T D Y YD+ R +Q E Sbjct: 935 RYSFDAAGRMIAATAPGTELSRTYDAVGRLVTETVDGHAVSYRYDAAGRAAGLRLSQGHE 994 Query: 64 PLVESR----------------YLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGW 107 E + D GR TGW++ + + Sbjct: 995 ASWEFSPGGALTRLSSSGHEIAFTTDAAGR------------ATGWVADRKLSMTRGFDA 1042 Query: 108 DGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGE-DGGS 166 G RL + + + +++P + T+R L + +G + +G Sbjct: 1043 AG-RLAAQRVTFGTSALVARDFAYSPTDLLSEIRDVRTGTRRFELTKAGRVAGVQAEGWH 1101 Query: 167 VVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPAR------K 220 + + L S+ V ++S G TV + V R K Sbjct: 1102 ESYAYDALGNLASTNSQNSESVVYVHDGTLISSAGRTVYRHDAMGRVVSKTRRLLSGGTK 1161 Query: 221 IHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNE---ENPHQLQQLIRLP 270 Y D R +A + E W +YD G + + + + IR Sbjct: 1162 TWDYRWDARNRLVAARTPE-NVVWTYQYDPLGRRVGKVRLNGDGSVAEQIRFT 1213 Score = 46.7 bits (109), Expect = 0.002, Method: Composition-based stats. Identities = 42/248 (16%), Positives = 66/248 (26%), Gaps = 42/248 (16%) Query: 18 DRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYLYDPLGR 77 D GR++ TD R HYDS+ L+ A + YD Sbjct: 772 DAAGRISTLTD---------GSGRVTEQHYDSRGNLLTRIMPDGA----TWTFSYDLESN 818 Query: 78 RVAKR-------VWRRERDLTGWMSLSRKPQVTWYGWDG-DRLTTIQNDRTRIQTIYQPG 129 ++ W+ T + +DG RLTT+ Y+ Sbjct: 819 LSGEQAPDGSVRTWQYTFLNTLVGRTEADGAAYRFAYDGQMRLTTVTGPTGAA-WRYEYN 877 Query: 130 SFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILA-DR 188 L+ G +R ++ S E Q L +LA D Sbjct: 878 PVGHLVAETDFNGRRIDYERDAVGQMTVLSQAEGRRQ--------QFLHDPVGRVLAMDA 929 Query: 189 VSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWCAEY 248 + +R + G + + T D G + +G Y Sbjct: 930 DGDVTRYSFDAAGRMIAATAPGTELSRT---------YDAVGRLVTET-VDGHAV-SYRY 978 Query: 249 DEWGNLLN 256 D G Sbjct: 979 DAAGRAAG 986 >UniRef50_C7PJF4 YD repeat protein n=2 Tax=Chitinophaga pinensis DSM 2588 RepID=C7PJF4_CHIPD Length = 1401 Score = 184 bits (467), Expect = 7e-45, Method: Composition-based stats. Identities = 78/334 (23%), Positives = 110/334 (32%), Gaps = 80/334 (23%) Query: 3 PDNRIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYA 62 P ++A + YD G L +K DL + +Y + L TR Sbjct: 1007 PGGKLAESTEARFIYDEEGFLVKKIDLKAADAV-------WQYEWYGNGMLKKVTRPDN- 1058 Query: 63 EPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRI 122 + YD LGRR+ K+ K Q+T + WDG+ + Sbjct: 1059 ---KVVEFRYDALGRRIEKQ---------------YKGQITRFVWDGN---------ITL 1091 Query: 123 QTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLES 182 + P S P I ++ Sbjct: 1092 HQWHYPASERPAIEIDELGDIRQHHPE--------------------------------- 1118 Query: 183 EILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGAT 242 +E W+ G + + D + D+ G P G Sbjct: 1119 ----PVPAENLITWVFEEGTLIPVAKLTQDAR-------YAILSDYLGTPAEAYDASGEK 1167 Query: 243 EWCAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEESGLYYNRHRYYDPLQGRYITQDPIG 302 W E D +G L R GQ D E+GLYYNR RYY PL+G YI+QDPI Sbjct: 1168 VWEGELDIYGKLRKLAGASDFI-PFRRQGQYEDVETGLYYNRFRYYSPLEGLYISQDPIR 1226 Query: 303 LKGGWNFYQYPLNPVQYIDSMGLASKYGHLNNGG 336 L+GG FY+Y P +D GL Y ++ G Sbjct: 1227 LEGGSRFYEYSRCPTLILDPFGLVDFYHATSSPG 1260 Score = 51.0 bits (120), Expect = 1e-04, Method: Composition-based stats. Identities = 45/289 (15%), Positives = 79/289 (27%), Gaps = 40/289 (13%) Query: 3 PDNRIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTD-----------DERTHRYHYDSQH 51 +R + Y Y+ G +T D + + + ++ + YD + Sbjct: 397 AHHRGQQKQLVRYEYNTAGDMTAIIDALEQTTRMQYHQHLMMKKTDRNGQSFYWEYDGKG 456 Query: 52 RLVHYTRTQYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDR 111 R V T E L+E R Y+P + + Q T Y + D Sbjct: 457 RCV---HTWGDEGLLEGRIEYNP--------------QEGYNLVTNALGQTTTYYYTPDF 499 Query: 112 LTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPP 171 L T D + R E Q DG ++ F Sbjct: 500 LVTQIKDPLGNSQFTAYTEDAEIYR-EIDEEANVTGYAYDEKGNRTQIIHPDGSTIFFNY 558 Query: 172 VLVQMLD-RLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCD-HR 229 L + ++ + L + + +M +K+ + D R Sbjct: 559 DDEDRLLLSVGAQGGSRSYVYYEEGPLKGLLHSFTEADGRMSIFSYNEKKLLVKVEDRQR 618 Query: 230 GLPLALVSTEGATEW---------CAEYDEWGNLLNEENPHQLQQLIRL 269 L + +YD WG ++ N Q +Q R Sbjct: 619 NSTLLEYDEDHNISALILQNGGHSSWQYDAWGQCIHTVNSLQQEQHFRY 667 >UniRef50_Q7N2G0 Complete genome; segment 11/17 n=4 Tax=Gammaproteobacteria RepID=Q7N2G0_PHOLL Length = 1498 Score = 184 bits (466), Expect = 7e-45, Method: Composition-based stats. Identities = 84/346 (24%), Positives = 127/346 (36%), Gaps = 59/346 (17%) Query: 8 ARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRL-------------- 53 R Y Y + ++ G R DE ++ YD+ L Sbjct: 1080 TRWDETRYGY----NVNDQVVTTQFGGPRACDE---QFVYDAGQHLHYQKRVPERLSEDL 1132 Query: 54 VHYTRTQYAEPLVES---RYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDG- 109 TQ A +++ Y YD GRR K R +P+ Y WD Sbjct: 1133 RQSYHTQQAGRVIQHGACTYRYDENGRRTEKTERR----------WGYRPRTWRYRWDAH 1182 Query: 110 DRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVF 169 DRLT + ++ Y +F I K Q A + G ++ Sbjct: 1183 DRLTGFISPEG-VRWRYCYDAFGRRI---------GKRQEVDAAGPPVKPTAIIGYDYLW 1232 Query: 170 PPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHR 229 + + ++ D E+S WL G + + +++ DH+ Sbjct: 1233 SGEQLIEETPVYADGTVDY--EQSIHWLYEPGALTPLARFE-------KGQLYYVVSDHQ 1283 Query: 230 GLPLALVSTEGATEWCAEYDEWGN-----LLNEENPHQLQQLIRLPGQQYDEESGLYYNR 284 G +++ G W WG +L +P L R GQ D ESGL+YNR Sbjct: 1284 GTVREILTEAGELIWAGRLLTWGEPECWPVLTVNDPRNLTCNFRFAGQYEDRESGLFYNR 1343 Query: 285 HRYYDPLQGRYITQDPIGLKGGWNFYQYPLNPVQYIDSMGLASKYG 330 HRYY+ G+Y++ DP+ L GG N Y Y +PV +ID GLA+ Sbjct: 1344 HRYYESDTGQYLSPDPLNLSGGVNPYGYVHDPVNWIDPFGLAACPT 1389 Score = 99.9 bits (247), Expect = 2e-19, Method: Composition-based stats. Identities = 44/145 (30%), Positives = 60/145 (41%), Gaps = 20/145 (13%) Query: 5 NRIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEP 64 R+ + YRYD +GR TEKT+ R T RY +D+ RL + + Sbjct: 1142 GRVIQHGACTYRYDENGRRTEKTERRWGYRPR-----TWRYRWDAHDRLTGFISPEG--- 1193 Query: 65 LVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQ-------- 116 V RY YD GRR+ KR +E D G Y W G++L Sbjct: 1194 -VRWRYCYDAFGRRIGKR---QEVDAAGPPVKPTAIIGYDYLWSGEQLIEETPVYADGTV 1249 Query: 117 NDRTRIQTIYQPGSFTPLIRVETAT 141 + I +Y+PG+ TPL R E Sbjct: 1250 DYEQSIHWLYEPGALTPLARFEKGQ 1274 Score = 59.4 bits (142), Expect = 3e-07, Method: Composition-based stats. Identities = 49/311 (15%), Positives = 90/311 (28%), Gaps = 55/311 (17%) Query: 8 ARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVE 67 A Y Y+ G +T + D + D D R Y + Y E Sbjct: 587 AEGGCTRYHYNADGLVTRQVDPLGHDTRTEWDFSHKVAETDPLGRTTAYEYSPYGELTGV 646 Query: 68 SR-------YLYDPLGRRVAKR---------VWRRERDLTGWMSLSRKPQVTWYGWDGDR 111 Y YD G+ + + +L + + + T YG G+ Sbjct: 647 MSSTGDLTAYDYDEYGQLTRVTQPDGARWQLHYSEQGNLASVIDPQGRVEETRYGPRGEI 706 Query: 112 LTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFP- 170 L + D + Y+ L ++ G L + L L+ + + P Sbjct: 707 LRRVLPDGRTWRYGYE---RQQLSEIQAPDGALTRFDTDGLGRLLRVTDALHQQTHYHPS 763 Query: 171 ---------------PVLVQMLDRLESEILADRVSE---ESRRWLASCGLTVEQMQN--- 209 P ++ +SE V++ + R+ + ++ Sbjct: 764 PFHANPAGSISEIGLPDGIRQTIDYDSERRVSAVTDGEGRTTRYTYDAFDRLSRLTRPDG 823 Query: 210 -----------QMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEE 258 ++ V + + Y D G ++ G T +YD G L Sbjct: 824 TALTFGYDRLTRLKTVTSETGDTYHYTRDPAGRVISETDFTGRTI-HYQYDAAGRRLTAR 882 Query: 259 NPHQLQQLIRL 269 P+ QL+R Sbjct: 883 YPN--HQLLRW 891 Score = 50.2 bits (118), Expect = 2e-04, Method: Composition-based stats. Identities = 64/304 (21%), Positives = 93/304 (30%), Gaps = 51/304 (16%) Query: 17 YDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQY--------------- 61 YD R++ TD + RT RY YD+ RL TR Sbjct: 788 YDSERRVSAVTD---------GEGRTTRYTYDAFDRLSRLTRPDGTALTFGYDRLTRLKT 838 Query: 62 --AEPLVESRYLYDPLGRRVAK-----RVWRRERDLTGWMSLSRKPQVTWYGW---DGDR 111 +E Y DP GR +++ R + D G +R P W D DR Sbjct: 839 VTSETGDTYHYTRDPAGRVISETDFTGRTIHYQYDAAGRRLTARYPNHQLLRWCYTDDDR 898 Query: 112 LTTIQ--NDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVF 169 LT + + T+ ++ + G L + T Sbjct: 899 LTRQEAWQEEAEQCTLCSVTTYDHDAQ-----GRLIRATNPDAVVTFAYDESGRLTKETI 953 Query: 170 PPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHR 229 V S + A R + GL MQ Q+D + P + H D Sbjct: 954 NGRAVSHQWDPRSGLPAGRQMDTLPAVSWYYGLNGRLMQWQLDG-HAPLQMQH----DGL 1008 Query: 230 GLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEE---SGLYYNRHR 286 G +A S G + A Y G LL + + + + D G RH Sbjct: 1009 GREIARESAAGFIQSQA-YTPVG-LLAHQTAGRSSDWFKQTLYEADPHFPPRGSAVTRHW 1066 Query: 287 YYDP 290 +Y P Sbjct: 1067 HYTP 1070 Score = 42.9 bits (99), Expect = 0.031, Method: Composition-based stats. Identities = 37/246 (15%), Positives = 67/246 (27%), Gaps = 18/246 (7%) Query: 39 DERTHRYHYDSQHRLVHYTRTQYAEPLVESRYLYDPLG----------RRVAKRVWRRER 88 + + YD HRL + Y + L +R+ + Sbjct: 458 NGNQTVFRYDEHHRLTRLVHADMTT--LALHYEHQQLTAIDWLHAGQRQRLVTCRYDNPG 515 Query: 89 DLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQ-PGSFTPLIRVETATGELAKT 147 L + Y G+ D+T + Y G T + + + Sbjct: 516 YLAECDTFQFHHLWHEYTPQGNMTRWHDTDKTDVTVHYDNAGRVTATTTPQGYWQDRFEY 575 Query: 148 -QRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVE- 205 R + GG ++ + +D L + + G T Sbjct: 576 DDERRVTTYFDAEGGCTRYHYNADGLVTRQVDPLGHDTRTEWDFSHKVAETDPLGRTTAY 635 Query: 206 --QMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQL 263 ++ V + + Y D G + +GA W Y E GNL + +P Sbjct: 636 EYSPYGELTGVMSSTGDLTAYDYDEYGQLTRVTQPDGA-RWQLHYSEQGNLASVIDPQGR 694 Query: 264 QQLIRL 269 + R Sbjct: 695 VEETRY 700 Score = 42.5 bits (98), Expect = 0.038, Method: Composition-based stats. Identities = 54/335 (16%), Positives = 84/335 (25%), Gaps = 82/335 (24%) Query: 14 LYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAE---------- 63 Y +D GRL T+ + YD RL T A Sbjct: 919 TYDHDAQGRLIRATNPDA----------VVTFAYDESGRLTKETINGRAVSHQWDPRSGL 968 Query: 64 ---------PLVESRY-------------------LYDPLGRRVAKRVWRRERDLTGWMS 95 P V Y +D LGR +A+ + Sbjct: 969 PAGRQMDTLPAVSWYYGLNGRLMQWQLDGHAPLQMQHDGLGREIARESAAGFIQSQAYTP 1028 Query: 96 LSRKPQVT------WY---GWDGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAK 146 + T W+ ++ D + Y P I +T E Sbjct: 1029 VGLLAHQTAGRSSDWFKQTLYEADPHFPPRGSAVTRHWHYTPAYNVACIE-DTRWDETRY 1087 Query: 147 TQRRSLADTLQQSGGEDGGSVVFPPVLVQML-------DRLESEILADRVSEESRRWLAS 199 + Q GG F Q L +RL ++ ++++ R + Sbjct: 1088 GYNVNDQVVTTQFGGPRACDEQFVYDAGQHLHYQKRVPERLSEDLRQSYHTQQAGRVIQH 1147 Query: 200 CGLTVEQMQNQMDPVYTPAR-----KIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNL 254 T +N T R + Y D +S EG W YD +G Sbjct: 1148 GACTYRYDENGRRTEKTERRWGYRPRTWRYRWDAHDRLTGFISPEG-VRWRYCYDAFGRR 1206 Query: 255 LNEENPHQLQQL-----------IRLPGQQYDEES 278 + + G+Q EE+ Sbjct: 1207 IGKRQEVDAAGPPVKPTAIIGYDYLWSGEQLIEET 1241 >UniRef50_B4V6T6 Rhs protein n=2 Tax=Streptomyces RepID=B4V6T6_9ACTO Length = 1263 Score = 184 bits (466), Expect = 7e-45, Method: Composition-based stats. Identities = 78/338 (23%), Positives = 108/338 (31%), Gaps = 61/338 (18%) Query: 10 DAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYA------- 62 Y D GR+T + + RY YD+ Sbjct: 828 AGARTYELDPAGRVTAV----------KAEGWSERYAYDAVGNQTEAAWPAAHPGGSDAT 877 Query: 63 ----------EPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDG-DR 111 RY YD +GR ++ R LSRKP Y WD DR Sbjct: 878 GPRTYEGTRLTGAGRVRYEYDAMGRITLRQRTR----------LSRKPDTWRYEWDAEDR 927 Query: 112 LTTIQN-DRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFP 170 L + D T + Y RRS + G + F Sbjct: 928 LRAVTTPDGTLWRYAYD------------------ALGRRSAKRRMAADGVTLAEEITFV 969 Query: 171 PVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTP-ARKIHLYHCDHR 229 + + + ++ D + W + Q + D + D Sbjct: 970 WDGMTLCE--QTTTSPDLPHAVTLTWDHDGLQPLAQTERLADADGREIDSRFFGIVTDLI 1027 Query: 230 GLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEESGLYYNRHRYYD 289 G P LV GA W WG + + +R PGQ +D ESGL+YN RYYD Sbjct: 1028 GTPTELVDEAGAIAWRTRSTLWGATTWNADANAYT-PLRFPGQYFDPESGLHYNCFRYYD 1086 Query: 290 PLQGRYITQDPIGLKGGWNFYQYPLNPVQYIDSMGLAS 327 P RY++ DP+GL N Y NP + D +GL Sbjct: 1087 PETARYLSVDPLGLGPAPNPVAYVSNPHSWSDPLGLTP 1124 Score = 57.5 bits (137), Expect = 1e-06, Method: Composition-based stats. Identities = 56/292 (19%), Positives = 88/292 (30%), Gaps = 45/292 (15%) Query: 11 AHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQY--------- 61 A YD GRL TD + RT + D + RLV R Sbjct: 387 ATTRSTYDTRGRLVALTDAL---------RRTTVFGRDDEGRLVTVVRPDGRELSTGYDD 437 Query: 62 -AEPLVE-------SRYLYDPLGRRVAKR-----VWRRERDLTGWMS--LSRKPQVTWYG 106 PLV+ R+ YD G RV++ R D G ++ T Sbjct: 438 DGRPLVQTEADRTAWRFTYDERGNRVSRTSPVGGTTRYTYDTAGGLASVTDALGATTRVR 497 Query: 107 WDGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGS 166 D L D T Y+ +R+ A G++ + + + + DG S Sbjct: 498 CDRAGLPVEITDPLGAVTRYERDMLGRPVRITDALGKITVLE-WTTEGRIARRIDPDGSS 556 Query: 167 VVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLT---------VEQMQNQMDPVYTP 217 + R ++ L + E + T V + ++ V P Sbjct: 557 QAWAYDGEGNCIR-HTDALGRTTNVEYGDFDLVKARTGPDGARYSFVHDARLRLTEVVNP 615 Query: 218 ARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRL 269 Y D G+P + +G T +D G L+ N + Sbjct: 616 HGLSWQYTYDASGMPESETDFDGRTV-RYVHDAAGRLVTRVNAAGQAVRVEY 666 Score = 53.3 bits (126), Expect = 2e-05, Method: Composition-based stats. Identities = 44/314 (14%), Positives = 81/314 (25%), Gaps = 71/314 (22%) Query: 9 RDAHYLYRYDRHGRLTEK-----------TDLIPEGVIRTDDERTHRYHYDSQHRLVHYT 57 Y +D GRL + D + +++ D RY YD RL T Sbjct: 637 DGRTVRYVHDAAGRLVTRVNAAGQAVRVEYDALDNRILKEVDGAVTRYEYDYSDRLAAIT 696 Query: 58 RTQYAEPLVESRY---------------LYDPLGRRVAKRVWRRERDLTGWMSLSRKPQV 102 + + R+ YD L R V++ R + + R+ ++ Sbjct: 697 GAEGTLTYLRDRFGRTREETADGRSLLRTYDELSRVVSRTTPSGARAEWTYDAAGRRSEL 756 Query: 103 T------WYGWDGD---------------------------RLTTIQNDRTRIQTIYQPG 129 T + D RLT + + + Y Sbjct: 757 TSSRRRITFERDATGRETGRRIGDAAALSLQHDDLGRLVDQRLTGVDGSLLQ-RRGYAYR 815 Query: 130 SFTPLIRVETATGELAKTQ--RRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILAD 187 + L+ VE + ++ G + + + +D Sbjct: 816 ADGHLVGVEDELAGARTYELDPAGRVTAVKAEGWSERYAYDAVGNQTEAAWPAAHPGGSD 875 Query: 188 RVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHL--------YHCDHRGLPLALVSTE 239 + G + + T ++ L Y D A+ + + Sbjct: 876 ATGPRTYEGTRLTGAGRVRYEYDAMGRITLRQRTRLSRKPDTWRYEWDAEDRLRAVTTPD 935 Query: 240 GATEWCAEYDEWGN 253 G W YD G Sbjct: 936 GTL-WRYAYDALGR 948 Score = 46.3 bits (108), Expect = 0.002, Method: Composition-based stats. Identities = 58/291 (19%), Positives = 78/291 (26%), Gaps = 75/291 (25%) Query: 12 HYLYRYDRHGRLTEKTDLI-------------PEGVIRT-----DDERTHRYHYDSQHRL 53 Y Y YD R + P +RT D Y D +R+ Sbjct: 319 RYTYAYDDLDRCVSQGGANGHMTLAFAYGGPDPRTGLRTTTTTTPDGEVCSYVVDEAYRI 378 Query: 54 VHYTRTQYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSR---------KPQVTW 104 V A +R YD GR VA R + G R + T Sbjct: 379 VESRDPLGA----TTRSTYDTRGRLVALTDALRRTTVFGRDDEGRLVTVVRPDGRELSTG 434 Query: 105 YGWDGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDG 164 Y DG L + DRT + Y +R + GG Sbjct: 435 YDDDGRPLVQTEADRTAWRFTYD--------------------ERGNRVSRTSPVGGTTR 474 Query: 165 GSVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLY 224 + L + D L +R GL VE DP+ R Y Sbjct: 475 YTYDTAGGLASVTDAL---------GATTRVRCDRAGLPVE----ITDPLGAVTR----Y 517 Query: 225 HCDHRGLPLALVSTEGATE---WCAEYDEWGNLLNEENPHQLQQLIRLPGQ 272 D G P+ + G W E G + +P Q G+ Sbjct: 518 ERDMLGRPVRITDALGKITVLEWTTE----GRIARRIDPDGSSQAWAYDGE 564 Score = 44.8 bits (104), Expect = 0.008, Method: Composition-based stats. Identities = 45/254 (17%), Positives = 76/254 (29%), Gaps = 29/254 (11%) Query: 39 DERTHRYHYDSQHRLVHYTRTQYAEPLVESRYLYDPLGRRVAKRVWRRERDLT----GWM 94 R R+ YD + R+ +T T Y YD L R V++ L G Sbjct: 295 SGRPLRFAYDERARITSWTDTNGC----RYTYAYDDLDRCVSQGGANGHMTLAFAYGGPD 350 Query: 95 SLSRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQP------GSFTPLIRVETATGELAKTQ 148 + T DG+ + + ++ RI P ++ R+ T L +T Sbjct: 351 PRTGLRTTTTTTPDGEVCSYVVDEAYRIVESRDPLGATTRSTYDTRGRLVALTDALRRTT 410 Query: 149 RRSLADTLQ------------QSGGEDGGSVVFPPVLVQMLDRLESEILADRVSEESRRW 196 D + +G +D G + + R + +RVS S Sbjct: 411 VFGRDDEGRLVTVVRPDGRELSTGYDDDGRPLVQTEADRTAWRFTYDERGNRVSRTSP-- 468 Query: 197 LASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLN 256 + + V CD GLP+ + GA E D G + Sbjct: 469 VGGTTRYTYDTAGGLASVTDALGATTRVRCDRAGLPVEITDPLGAVT-RYERDMLGRPVR 527 Query: 257 EENPHQLQQLIRLP 270 + ++ Sbjct: 528 ITDALGKITVLEWT 541 >UniRef50_Q30CR7 LipX3 n=4 Tax=Streptomyces RepID=Q30CR7_STRAU Length = 1560 Score = 184 bits (466), Expect = 9e-45, Method: Composition-based stats. Identities = 83/314 (26%), Positives = 109/314 (34%), Gaps = 80/314 (25%) Query: 4 DNRIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAE 63 R+ R Y YD GRL KT + G R T +Y + ++ RLV + Sbjct: 1157 GTRLHRAGRTTYAYDGQGRLIRKTVRLLSGGRR-----TSQYGWSAEDRLVRTVAPDGS- 1210 Query: 64 PLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLT-TIQNDRTRI 122 E RY YDP GRRV K+ D+ + T + WDG RL I+ D T Sbjct: 1211 ---EWRYTYDPDGRRVGKQRLGTGGDVL---------EETTFSWDGTRLAEQIETDGTVT 1258 Query: 123 QTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLES 182 Y PGS+ P+ + + E R Sbjct: 1259 TWDYAPGSYRPVAQTVSGGRERPAVNRG-------------------------------- 1286 Query: 183 EILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGAT 242 + R+ A D V TP LVS +G Sbjct: 1287 ---GSDPGDTDARFYAIV----------TDLVGTP---------------TELVSADGRI 1318 Query: 243 EWCAEYDEWGNLLNEENPH-QLQQLIRLPGQQYDEESGLYYNRHRYYDPLQGRYITQDPI 301 W + WG P + +R PGQ D E+G YN RYYDP RY++ DP+ Sbjct: 1319 VWHRRFTAWGQPTGTPTPGPEADCPLRFPGQYADAETGWNYNYFRYYDPETARYVSADPL 1378 Query: 302 GLKGGWNFYQYPLN 315 GL N Y Y N Sbjct: 1379 GLAPDPNDYAYVTN 1392 Score = 69.8 bits (169), Expect = 2e-10, Method: Composition-based stats. Identities = 51/281 (18%), Positives = 76/281 (27%), Gaps = 45/281 (16%) Query: 13 YLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYLY 72 Y YD G L +D R R YD++ R+ +T RY Y Sbjct: 553 RRYGYDAEGNLRAVSD---------GQGRDFRLTYDAESRITSWTDRNGGW----YRYTY 599 Query: 73 DPLGRRVAKRVWRRERDLTGWMSLSRK--------PQVTWYGWDG-DRLTTIQNDRTRIQ 123 D R A R D + + + + T Y +D +L + + Sbjct: 600 DERHRVTAGRGADGFLDCSLTYDDAARVNTYRNSLGRTTTYRFDERLQLVQVTDPLGAST 659 Query: 124 TIYQPGS------FTPLIRVETA----TGELAKTQRRSLADTLQQSGGEDGGSVVFPPVL 173 + PL R G L + R L+ + + P Sbjct: 660 HREWDENGRLVAWTDPLGRTTRQVFDAAGHLIEVVRPDLSSVRAEYDEAGRTRRLTDPDG 719 Query: 174 VQML----DRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHR 229 DR + D +R + G + D Sbjct: 720 SFWSYTYDDRGNRLTVTDPSGATTRHRYDALGRPLSVTDALGH--------TRHIETDPA 771 Query: 230 GLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRLP 270 GLPLAL EG T A D +G + +P Sbjct: 772 GLPLALTDPEGRTT-RARRDSFGRVTAVTDPTGATDRFGWT 811 Score = 52.9 bits (125), Expect = 3e-05, Method: Composition-based stats. Identities = 57/341 (16%), Positives = 100/341 (29%), Gaps = 81/341 (23%) Query: 5 NRIARDAHY-----LYRYDRHGRLTEKT-----------DLIPEGVIRTDDERTHRYHYD 48 NR+ R+ + Y +D G+ T T DL+ + Y YD Sbjct: 898 NRLMRETDFNGRTLTYTHDAAGQRTSWTNGAGQTTDVTVDLLGRPRQYRTADEVTTYEYD 957 Query: 49 SQHRL---------VHYTRTQYAEPLVES------RYLYDPLGRRVAKRV---------- 83 S L V T L E+ Y YD LGRR+++R Sbjct: 958 SAGSLLRAANRDTTVERTYDSMGRTLTETVNGRTTTYTYDALGRRISRRTPSSITSTWTY 1017 Query: 84 ----------WRRERDLTGWMSLSRKPQVT-------WYGWDGD-RLTTIQ--------- 116 R + + R+ + T WDG RLT Sbjct: 1018 EATGHPQTLSGTGSRLRFDYDTAHREIRRTLGAEAVLHQSWDGSGRLTGQSVTTPGRAGG 1077 Query: 117 --NDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSL--------ADTLQQSGGEDGGS 166 Y+ L ++ GE + + AD ++ G + G+ Sbjct: 1078 DAGGELLQHRTYEYDPDGALREIDELLGESRRFDVDPVGRLTAVRTADREERYGYDRAGN 1137 Query: 167 VVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHC 226 +V + + R+ R A G ++ + + + R+ Y Sbjct: 1138 LVTSSPYDGTAEPRPHHVDGTRLHRAGRTTYAYDG--QGRLIRKTVRLLSGGRRTSQYGW 1195 Query: 227 DHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLI 267 + V+ +G+ W YD G + ++ ++ Sbjct: 1196 SAEDRLVRTVAPDGSE-WRYTYDPDGRRVGKQRLGTGGDVL 1235 Score = 51.3 bits (121), Expect = 9e-05, Method: Composition-based stats. Identities = 54/311 (17%), Positives = 79/311 (25%), Gaps = 71/311 (22%) Query: 3 PDNRIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYA 62 PD R Y + YD LT + D RT Y YD +RL+ T Sbjct: 864 PDGR-----RYTFAYDTELNLT---------GVHNADGRTWEYAYDDANRLMRETDFNG- 908 Query: 63 EPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSR------KPQVTWYGWD-------- 108 Y +D G+R + + L R +VT Y +D Sbjct: 909 ---RTLTYTHDAAGQRTSWTNGAGQTTDVTVDLLGRPRQYRTADEVTTYEYDSAGSLLRA 965 Query: 109 --------------GDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLAD 154 G LT N RT Y + I T + + + Sbjct: 966 ANRDTTVERTYDSMGRTLTETVNGRTTT---YTYDALGRRISRRTPSSITSTWTYEATGH 1022 Query: 155 TLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPV 214 SG + ++ L +E + + + S R T + Sbjct: 1023 PQTLSGTGSRLRFDYDTAHREIRRTLGAEAVLHQSWDGSGRLTGQSVTTPGRAGGDAGGE 1082 Query: 215 YTPARKIHLYHCDHRGLPLAL-----------VSTEGATEW--------CAEYDEWGNLL 255 R Y D G + V G YD GNL+ Sbjct: 1083 LLQHRT---YEYDPDGALREIDELLGESRRFDVDPVGRLTAVRTADREERYGYDRAGNLV 1139 Query: 256 NEENPHQLQQL 266 + Sbjct: 1140 TSSPYDGTAEP 1150 Score = 47.1 bits (110), Expect = 0.001, Method: Composition-based stats. Identities = 42/269 (15%), Positives = 71/269 (26%), Gaps = 35/269 (13%) Query: 30 IPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYLYDPLGRRVAKRVWRRERD 89 +P + + + YD + + V + GR + V D Sbjct: 485 LPLTAMSDRNGHRIDFLYDEAGVVAEMRHSGGYRVAVATED-----GRVTSLSVLSSPED 539 Query: 90 LTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQPGS----------------FTP 133 G + S V YG+D + +D + +T Sbjct: 540 GYGVEADSPWAVVRRYGYDAEGNLRAVSDGQGRDFRLTYDAESRITSWTDRNGGWYRYTY 599 Query: 134 LIRVETATG-------ELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILA 186 R G + + T + ++ + F L + Sbjct: 600 DERHRVTAGRGADGFLDCSLTYDDAARVNTYRNSLGRTTTYRFDERLQLVQVTDPLGAST 659 Query: 187 DRVSEESRR---WLASCGLTVEQMQNQMD---PVYTPARKIHLYHCDHRGLPLALVSTEG 240 R +E+ R W G T Q+ + V P D G L +G Sbjct: 660 HREWDENGRLVAWTDPLGRTTRQVFDAAGHLIEVVRPDLSSVRAEYDEAGRTRRLTDPDG 719 Query: 241 ATEWCAEYDEWGNLLNEENPHQLQQLIRL 269 + W YD+ GN L +P R Sbjct: 720 SF-WSYTYDDRGNRLTVTDPSGATTRHRY 747 Score = 44.0 bits (102), Expect = 0.012, Method: Composition-based stats. Identities = 30/204 (14%), Positives = 50/204 (24%), Gaps = 19/204 (9%) Query: 9 RDAHYLYRYDRHGRLTEKTDLIPEGVIR------------TDDERTHRYHYDSQHRLVHY 56 A + +D G L T T D R + + YD++ L Sbjct: 823 DGATEAWSWDGEGNLASHTARNGAVTTYEFTHFHQPTSRTTPDGRRYTFAYDTELNLTGV 882 Query: 57 TRTQYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQ 116 Y YD R + + + + ++ T + T + Sbjct: 883 HNADG----RTWEYAYDDANRLMRETDFNGRTLTYTHDAAGQRTSWTN---GAGQTTDVT 935 Query: 117 NDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQM 176 D Y+ ++A L R + + S G V Sbjct: 936 VDLLGRPRQYRTADEVTTYEYDSAGSLLRAANRDTTVERTYDSMGRTLTETVNGRTTTYT 995 Query: 177 LDRLESEILADRVSEESRRWLASC 200 D L I S + W Sbjct: 996 YDALGRRISRRTPSSITSTWTYEA 1019 >UniRef50_Q9L0E3 Putative Rhs protein n=2 Tax=Streptomyces RepID=Q9L0E3_STRCO Length = 927 Score = 183 bits (465), Expect = 1e-44, Method: Composition-based stats. Identities = 90/366 (24%), Positives = 117/366 (31%), Gaps = 50/366 (13%) Query: 10 DAHYLYRYDRHGRLTEKTDLIPEGVIRTDD-----------------ERTHRYHYDSQHR 52 RYD GR TE+ R D +Y Y + Sbjct: 456 SQSLTVRYDAAGRETERRTGPMAMAQRWDGYDRLVEQRLLDVHKEQFALLRQYSYRADDH 515 Query: 53 LVHYTRTQYAEPLVE----------------SRYLYDPLGRR--------VAKRVWRRER 88 LV + E +Y YDP G A+ R Sbjct: 516 LVEVADSFAGRRRFELDAGTHVTAVRADHWSEQYAYDPAGDVSHGDWPLSAAQGDARSAV 575 Query: 89 DLTGWMSLS-RKPQVTWYGWDG----DRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGE 143 G SL R+ T Y D R T +R Y L V T G Sbjct: 576 GDRGEGSLGVRRAGRTTYEHDAQGRMTRRVTRALSGSRRVWEYAWNDQDQLREVVTPDGA 635 Query: 144 LAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLT 203 + L + + D G L + A S W G Sbjct: 636 RWQYLYDGLGRRIAKQLMGDDGGSRERVDFTWDGTDLAEQASATEDRVVSWDWSPHTGDP 695 Query: 204 VEQMQNQMDPVYTPAR---KIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENP 260 + Q + P + + + D G P LVS +G W WG L + + Sbjct: 696 LVQTERPCGPELSQREVDTRFYAIVTDLVGAPTELVSPDGDIGWRLRTTLWG-LPVDGSG 754 Query: 261 HQLQQLIRLPGQQYDEESGLYYNRHRYYDPLQGRYITQDPIGLKGGWNFYQYPLNPVQYI 320 +R PGQ +D E+GL+YN RYYDP GRY + DP+GL GG N Y NP +I Sbjct: 755 GSTDCPLRFPGQYHDPETGLHYNYFRYYDPGLGRYCSLDPLGLAGGPNPAWYTPNPTAWI 814 Query: 321 DSMGLA 326 D GLA Sbjct: 815 DPFGLA 820 Score = 53.3 bits (126), Expect = 2e-05, Method: Composition-based stats. Identities = 54/285 (18%), Positives = 75/285 (26%), Gaps = 66/285 (23%) Query: 8 ARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTR--------- 58 AR + Y YD G L R R Y YD+ +LV T Sbjct: 311 ARSREWSYTYDAVGNLV---------GERDFFGRALEYAYDAADQLVTRTNALGRSTHYR 361 Query: 59 -------TQYAEPLVESRYLYDPLGRRVAK------------------------RVWRRE 87 + +RY YD LGR R R + Sbjct: 362 HDLMGNVIEQRSGDGVARYSYDALGRMARAENADSVVILERDPVGRIVAESCNGRTLRNK 421 Query: 88 RDLTGWMSLSRKPQVTWYGWD---GDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGEL 144 D G P + W+ DR T + + Y E TG + Sbjct: 422 YDALGRRIHRHTPGGAFSVWEYDAADRPTALHTGSQSLTVRYDAAG----RETERRTGPM 477 Query: 145 AKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTV 204 A QR D L + D F + + + RR+ G V Sbjct: 478 AMAQRWDGYDRLVEQRLLDVHKEQFALLRQYSYRADDHLVEVADSFAGRRRFELDAGTHV 537 Query: 205 EQMQ---NQMDPVYTPARKIHLYHCD-----HRGLPLALVSTEGA 241 ++ Y PA + H D +G + V G Sbjct: 538 TAVRADHWSEQYAYDPAGDVS--HGDWPLSAAQGDARSAVGDRGE 580 Score = 51.3 bits (121), Expect = 7e-05, Method: Composition-based stats. Identities = 42/265 (15%), Positives = 67/265 (25%), Gaps = 41/265 (15%) Query: 6 RIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPL 65 R Y Y YD HGR I +D ++ + YD Sbjct: 14 RDRNGTEYRYEYDAHGRCVR--------TIGSDGYQSGTFRYDPA----AGETVHVDSLG 61 Query: 66 VESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTI 125 + + Y+ RDL ++ T WD D + D T Sbjct: 62 HATTFRYN--------------RDLRITAEINALGNSTATEWDEDGRVLTETDALGRTTR 107 Query: 126 YQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEIL 185 Y + L V G T + ++ DG F L + Sbjct: 108 YTYDAQDNLRTVIRPDGS-HVTAEHGVLGLPERVVEADGSQWSFEYDTAGNLLSITDPAN 166 Query: 186 ADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWC 245 A + R+ + N + Y D G ++ GA Sbjct: 167 A------TARYTYGESGRLLAATNALGAEEA-------YAYDSFGRVVSHFDALGAET-K 212 Query: 246 AEYDEWGNLLNEENPHQLQQLIRLP 270 YD +G + + + Sbjct: 213 FTYDSFGRMESTTDSLGHVTRYGWT 237 Score = 51.3 bits (121), Expect = 8e-05, Method: Composition-based stats. Identities = 55/327 (16%), Positives = 92/327 (28%), Gaps = 86/327 (26%) Query: 16 RYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAE------------ 63 +D GR+ +TD + RT RY YD+Q L R + Sbjct: 88 EWDEDGRVLTETDAL---------GRTTRYTYDAQDNLRTVIRPDGSHVTAEHGVLGLPE 138 Query: 64 -----PLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVT-------WYGWDGDR 111 + + YD G ++ + R T Y +D Sbjct: 139 RVVEADGSQWSFEYDTAGNLLSITDPANATARYTYGESGRLLAATNALGAEEAYAYDSFG 198 Query: 112 LTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKT--------QRRSLADTLQQSGGED 163 D +T + SF + + G + + R+ +D ++ D Sbjct: 199 RVVSHFDALGAETKFTYDSFGRMESTTDSLGHVTRYGWTLEGLMAWRTSSDGAREHWTYD 258 Query: 164 GGSVVFP------------------------PVLVQMLDRLESEILADRVSE-ESRRWLA 198 G P ++ R ++E+ V++ SR W Sbjct: 259 GEGNETEHHDAVGGVTTSQYTHFGLLASRTQPDGARLSFRHDTELRLTSVTDARSREWSY 318 Query: 199 SC-------------GLTVEQMQNQMDPVYTP----ARKIHLYHCDHRGLPLALVSTEGA 241 + G +E + D + T R H H D G + S +G Sbjct: 319 TYDAVGNLVGERDFFGRALEYAYDAADQLVTRTNALGRSTHYRH-DLMGNVIEQRSGDG- 376 Query: 242 TEWCAEYDEWGNLLNEENPHQLQQLIR 268 YD G + EN + L R Sbjct: 377 -VARYSYDALGRMARAENADSVVILER 402 Score = 50.6 bits (119), Expect = 1e-04, Method: Composition-based stats. Identities = 43/226 (19%), Positives = 71/226 (31%), Gaps = 13/226 (5%) Query: 45 YHYDSQHRLVHYTRTQYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTW 104 YD +HR+V + E RY YD GR V R + +G T Sbjct: 2 LSYDREHRIVGWRDRNG----TEYRYEYDAHGRCV--RTIGSDGYQSGTFRYDPAAGETV 55 Query: 105 YGWDGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQS-GGED 163 + D T ++ + + E T+ +L T + + +D Sbjct: 56 HV-DSLGHATTFRYNRDLRITAEINALGNSTATEWDEDGRVLTETDALGRTTRYTYDAQD 114 Query: 164 GGSVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHL 223 V P + L +RV E + T + + DP AR + Sbjct: 115 NLRTVIRPDGSHVTAEHGVLGLPERVVEADGSQWSFEYDTAGNLLSITDPANATARYTY- 173 Query: 224 YHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRL 269 G LA + GA E YD +G +++ + + Sbjct: 174 ---GESGRLLAATNALGAEEA-YAYDSFGRVVSHFDALGAETKFTY 215 Score = 45.9 bits (107), Expect = 0.003, Method: Composition-based stats. Identities = 43/327 (13%), Positives = 77/327 (23%), Gaps = 77/327 (23%) Query: 9 RDAHYLYRYDRHGRLTEKTDLIPEGVIR------------TDDERTHRYHYDSQHRLVHY 56 A + YD G TE D + D + +D++ RL Sbjct: 249 DGAREHWTYDGEGNETEHHDAVGGVTTSQYTHFGLLASRTQPDGARLSFRHDTELRLTSV 308 Query: 57 TRTQYAEPLVESRYLYDPLGRRVAKR---------VWRRERDLTGWMSLSRKPQVTWYGW 107 T + E Y YD +G V +R + L + + + Sbjct: 309 TDAR----SREWSYTYDAVGNLVGERDFFGRALEYAYDAADQLVTRTNALGRSTHYRHDL 364 Query: 108 DGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATG------------------ELAKTQR 149 G+ + D Y + + R E A + Sbjct: 365 MGNVIEQRSGDGVA---RYSYDALGRMARAENADSVVILERDPVGRIVAESCNGRTLRNK 421 Query: 150 RSLADTLQQSGGEDGGSVVFPPVLVQMLDRLES-----EILADRVSEES----------R 194 G V+ L + + D E+ + Sbjct: 422 YDALGRRIHRHTPGGAFSVWEYDAADRPTALHTGSQSLTVRYDAAGRETERRTGPMAMAQ 481 Query: 195 RWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHR--------GLPLALVSTEGATEW-- 244 RW L +++ + + R+ DH G + Sbjct: 482 RWDGYDRLVEQRLLDVHKEQFALLRQYSYRADDHLVEVADSFAGRRRFELDAGTHVTAVR 541 Query: 245 ------CAEYDEWGNLLNEENPHQLQQ 265 YD G++ + + P Q Sbjct: 542 ADHWSEQYAYDPAGDVSHGDWPLSAAQ 568 >UniRef50_D0KZB0 YD repeat protein n=1 Tax=Halothiobacillus neapolitanus c2 RepID=D0KZB0_HALNC Length = 1467 Score = 183 bits (464), Expect = 1e-44, Method: Composition-based stats. Identities = 74/318 (23%), Positives = 115/318 (36%), Gaps = 26/318 (8%) Query: 12 HYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYL 71 +Y Y YD +G +T ++ Y YD RL+ + + + + Sbjct: 994 NYGYSYDANGNMTGQSGPDGAAA----------YQYDPLDRLIDES---WGTGNYHNAFS 1040 Query: 72 YDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQPGSF 131 YD G R+ + + + ++ +G L N Y + Sbjct: 1041 YDNNGNRL--TSLDSGGNTVDYSYDLQSNRLNQHGSQKITLDAAGNTTNDGTYQYLYDAA 1098 Query: 132 TPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSE 191 L V + R L++ G+ F L ++ Sbjct: 1099 GRLSEV--LLSGVTVASYRYDYRGLRREKIIAAGTTEFTYGPSGHLLSEQNTASGG---- 1152 Query: 192 ESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEW 251 R ++ S + Q+ A I+ H D G P + T W D + Sbjct: 1153 --RDYVWSDTSPIAQIDVNGSNQANDA--IYYLHTDAMGTPRLATNANQQTVWRWNRDAF 1208 Query: 252 GNLLNEENPHQLQQLIRLPGQQYDEESGLYYNRHRYYDPLQGRYITQDPIGLKGGWNFYQ 311 G+ + ++ +R PGQ YD E+GL+YN +RYYDP GRY T DPIGL GG N + Sbjct: 1209 GDRQVNASSASIEMNLRYPGQYYDTETGLFYNWNRYYDPSTGRYATSDPIGLSGGVNTFG 1268 Query: 312 YPL-NPVQYIDSMGLASK 328 Y NP+ ID GL Sbjct: 1269 YVSANPLALIDPWGLFGS 1286 Score = 62.9 bits (151), Expect = 3e-08, Method: Composition-based stats. Identities = 44/256 (17%), Positives = 83/256 (32%), Gaps = 16/256 (6%) Query: 16 RYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYLYDPL 75 YD GRL +KTD + Y YD + RL T+ + + Y P Sbjct: 589 AYDADGRLLQKTD---------PNGLVTSYAYDPRGRLSRITQQASGSSARVTTFAYTPS 639 Query: 76 GRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQPGSFTPLI 135 + + + + +T D +IY P S + + Sbjct: 640 SKLASTSLPDGRTLTYSYDDAQELTAITDNLGDKVSYAYDSRGNRSQTSIYDPDS-SLVR 698 Query: 136 RVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSEESRR 195 ++++ + + ++ Q + G++V + + D ++ + Sbjct: 699 QIKSVYDLRNHLASSNDSGSITQQVTDALGNLV---QQTDPNNNAPTTHSYDPLNRLIQT 755 Query: 196 WLASCGLTVEQ--MQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGN 253 A G T + +++ V TP Y D G L VS + T YD GN Sbjct: 756 VNAIGGTTSYGYDVNAEINQVITPNGATTGYQNDDFGDLLQEVSPDRGTT-TYAYDAAGN 814 Query: 254 LLNEENPHQLQQLIRL 269 L+ + + + Sbjct: 815 LIQKTDARGVIANYSY 830 Score = 51.3 bits (121), Expect = 7e-05, Method: Composition-based stats. Identities = 47/316 (14%), Positives = 81/316 (25%), Gaps = 71/316 (22%) Query: 3 PDNRIARD-----AHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYT 57 P NR+ + Y YD + + + + T + T Y D L+ Sbjct: 748 PLNRLIQTVNAIGGTTSYGYDVNAEINQ---------VITPNGATTGYQNDDFGDLLQEV 798 Query: 58 RTQYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSR------------------- 98 + Y YD G + K R + +L+R Sbjct: 799 SPDRG----TTTYAYDAAGNLIQKTDARGVIANYSYDALNRLTATHFSGMSQASDADITL 854 Query: 99 --------------------KPQVTWYGWD--GDRLTTIQNDRTRIQTI-YQPGSFTPLI 135 + T Y +D G+ L I + T TI Y+ + + Sbjct: 855 TYDHGQNCSNGIGHLCTAQDQSGTTIYAYDAFGNILNQIHSAGTTTSTISYRYDNGNRIA 914 Query: 136 RVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSEESRR 195 + G R + T G G + ++ + E Sbjct: 915 MIIYPDG-------REVGYTRDAIGRVQGITTTAAGNSQTLVSARQYHADGSLTGETFGN 967 Query: 196 WLASCGLTVEQMQNQMDPVYTPARKIHL-YHCDHRGLPLALVSTEGATEWCAEYDEWGNL 254 LA Q + + ++ Y D G +GA +YD L Sbjct: 968 GLADQRQYTAQGRLSSWTLGGSNVNLNYGYSYDANGNMTGQSGPDGA--AAYQYDPLDRL 1025 Query: 255 LNEE-NPHQLQQLIRL 269 ++E Sbjct: 1026 IDESWGTGNYHNAFSY 1041 Score = 48.3 bits (113), Expect = 7e-04, Method: Composition-based stats. Identities = 40/277 (14%), Positives = 76/277 (27%), Gaps = 44/277 (15%) Query: 8 ARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVE 67 ++D + +T+ D +T +Y YDSQ+RL T+ Sbjct: 426 GDGKGLTQQFDARNNVISRTNA---------DGQTTQYTYDSQNRLASETQAAGTSQART 476 Query: 68 SRYLYDPLG-------RRVAKRVWRRERDLTGWMSLSRKPQVTWYGW------------- 107 Y Y G R + ++ + + + Q+T G+ Sbjct: 477 VSYQYGTDGLALPAEIDRPSVCAGSSQQTVITYDAHHNPIQITENGYTPACSAISRSLSL 536 Query: 108 -----------DGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTL 156 DG R G+ L+ + A G + L Sbjct: 537 GYNSAGQVTRIDGPRTDVSDVTTMSYNNCTTGGACGQLLSLTDALGHITTFNAYDADGRL 596 Query: 157 QQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQ--MDPV 214 Q +G + L R+ + + + S L + + + Sbjct: 597 LQKTDPNGLVTSYAYDPRGRLSRITQQASGSSARVTTFAYTPSSKLASTSLPDGRTLTYS 656 Query: 215 YTPARKIHLYHCDHRGL-PLALVSTEGATEWCAEYDE 250 Y A+++ D+ G + G + YD Sbjct: 657 YDDAQELTAI-TDNLGDKVSYAYDSRGNRSQTSIYDP 692 Score = 47.9 bits (112), Expect = 9e-04, Method: Composition-based stats. Identities = 44/285 (15%), Positives = 73/285 (25%), Gaps = 77/285 (27%) Query: 5 NRIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEP 64 NR+ + D G T ++ T++Y YD+ RL Sbjct: 1067 NRLNQHGSQKITLDAAGNTT--------------NDGTYQYLYDAAGRLSEVL----LSG 1108 Query: 65 LVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQT 124 + + Y YD G R K + + T YG G L+ Sbjct: 1109 VTVASYRYDYRGLRREKIIAAGTTEFT-------------YGPSGHLLSEQNTASGGRDY 1155 Query: 125 IYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEI 184 ++ S P+ +++ A L G + Q + R + Sbjct: 1156 VWSDTS--PIAQIDVNGSNQANDAIYYL------HTDAMGTPRLATNANQQTVWRWNRDA 1207 Query: 185 LADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIH------LYHCDHRG-------- 230 DR S + Q + ++ + + D G Sbjct: 1208 FGDRQVNASSASIEMNLRYPGQYYDTETGLFYNWNRYYDPSTGRYATSDPIGLSGGVNTF 1267 Query: 231 -----LPLALVST-----------------EGATEWCAEYDEWGN 253 PLAL+ G YD +GN Sbjct: 1268 GYVSANPLALIDPWGLFGSAQVSPIPPGYNSGDV--RGAYDSYGN 1310 >UniRef50_B0VRR7 Putative uncharacterized protein n=1 Tax=Acinetobacter baumannii SDF RepID=B0VRR7_ACIBS Length = 296 Score = 183 bits (463), Expect = 2e-44, Method: Composition-based stats. Identities = 50/116 (43%), Positives = 68/116 (58%), Gaps = 7/116 (6%) Query: 221 IHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNE-------ENPHQLQQLIRLPGQQ 273 + YHCDH G P + GA W AEY WG E EN + IR GQ Sbjct: 43 VWFYHCDHLGTPQEMTDHTGAIIWKAEYKAWGECKAEKAKSNFFENSEIISNNIRFQGQY 102 Query: 274 YDEESGLYYNRHRYYDPLQGRYITQDPIGLKGGWNFYQYPLNPVQYIDSMGLASKY 329 +DEE+GL+YNR+RYY P GR++++DPIGL GG N Y Y +P +++D +GL+ + Sbjct: 103 FDEETGLHYNRYRYYSPYVGRFVSKDPIGLLGGSNNYAYAPSPTEWVDPLGLSCQK 158 >UniRef50_Q48LL6 Rhs family protein n=1 Tax=Pseudomonas syringae pv. phaseolicola 1448A RepID=Q48LL6_PSE14 Length = 362 Score = 183 bits (463), Expect = 2e-44, Method: Composition-based stats. Identities = 56/167 (33%), Positives = 84/167 (50%), Gaps = 3/167 (1%) Query: 185 LADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEW 244 L + +S +L G + + K++ +H D G PL + EG W Sbjct: 91 LREESPGQSSLYLYEPGSYAPLARV-DEKEGEVENKVYYFHTDQIGTPLEMTDAEGQIVW 149 Query: 245 CAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEESGLYYNRHRYYDPLQGRYITQDPIGLK 304 A+Y WG + + ++++Q +R GQ +D E+GL+YN RYYDP GR+ITQDPIGL Sbjct: 150 QAKYRAWGAV-EKLVVNEVEQNLRFQGQYFDVETGLHYNTFRYYDPEIGRFITQDPIGLD 208 Query: 305 GGWNFYQYPLNPVQYIDSMGLAS-KYGHLNNGGYGARPNKPPTPDPS 350 GG N Y+Y NP ++D G A + G +G N P + + Sbjct: 209 GGDNLYKYVPNPTAWVDPWGWACNRPGGYKSGDVDTHGNLSPGVNRA 255 Score = 65.2 bits (157), Expect = 6e-09, Method: Composition-based stats. Identities = 30/160 (18%), Positives = 51/160 (31%), Gaps = 13/160 (8%) Query: 71 LYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQPGS 130 YD LGRRVAK+ + + + W G R+ ++ +Y+PGS Sbjct: 60 QYDSLGRRVAKQ-----------SEIKGQTDHKRFLWQGLRMLREESPGQSSLYLYEPGS 108 Query: 131 FTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVS 190 + PL RV+ GE+ D + +++ + V Sbjct: 109 YAPLARVDEKEGEVENKVYYFHTDQIGTPLEMTDAEGQIVWQAKYRAWGAVEKLVVNEV- 167 Query: 191 EESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRG 230 E++ R+ + Y P D G Sbjct: 168 EQNLRFQGQYFDVETGLHYNTFRYYDP-EIGRFITQDPIG 206 >UniRef50_UPI0001B4DD67 Rhs protein n=1 Tax=Streptomyces hygroscopicus ATCC 53653 RepID=UPI0001B4DD67 Length = 1730 Score = 183 bits (463), Expect = 2e-44, Method: Composition-based stats. Identities = 83/334 (24%), Positives = 107/334 (32%), Gaps = 54/334 (16%) Query: 14 LYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPL-------- 65 Y D GR+T+ Y YD H T Sbjct: 1311 HYTLDPVGRVTQV----------RAATWQESYAYDPAGNQAHATWPHQHPGADSTGERAY 1360 Query: 66 --------VESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDG-DRLTTIQ 116 +RY YD GR ++ R L RKP Y WD DRLT + Sbjct: 1361 TGTQIRAAGTTRYEYDAAGRTTLRQKAR----------LPRKPDTWRYTWDTEDRLTRVV 1410 Query: 117 N-DRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQ 175 D T Y P G QR + T+ + Sbjct: 1411 TPDGTTWHYRYDP------------LGRRTAKQRLAADGTVAEETRFTWHGATLIEQSTT 1458 Query: 176 MLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLAL 235 D + L E LA + D + T + + D G P L Sbjct: 1459 STDWTGRQNLTWDHDETGLIPLAQTTRYAPAVDTPQDEIDT---RFYAIITDLVGTPTHL 1515 Query: 236 VSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEESGLYYNRHRYYDPLQGRY 295 V G T W + WG + +R PGQ +D E+G +YN HR+YDP RY Sbjct: 1516 VDDTGHTAWQSRTTLWGTTTWNTDAAAYI-PLRFPGQYHDLETGHHYNLHRHYDPETARY 1574 Query: 296 ITQDPIGLKGGWNFYQYPLNPVQYIDSMGLASKY 329 +T DP+GL N Y NP + D GLA K Sbjct: 1575 LTPDPLGLAPAPNPTTYVHNPHVWADPDGLAPKK 1608 Score = 67.5 bits (163), Expect = 9e-10, Method: Composition-based stats. Identities = 58/342 (16%), Positives = 91/342 (26%), Gaps = 78/342 (22%) Query: 12 HYLYRYDRHGRLTEKTDLIPEGVIRTD------------------------------DER 41 Y YD GRL + R D D R Sbjct: 1141 RTDYTYDALGRLVAQDAAGQVSTFRWDPDGELLEAVGPDTELNRAYDPLGRMLSETVDGR 1200 Query: 42 THRYHYDSQHRLVHYTRTQYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQ 101 T YD+ +L A E+ Y YD G R RE + + R+ + Sbjct: 1201 TLHLAYDAAGQLTSRRTPAGA----ETAYAYDAAGNRTTLTTGGRELTVAH-DASGREIR 1255 Query: 102 VTWYG-------WD-GDRLTT---IQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRR 150 +W G W+ DRL R+ ++ Y L VE T + Sbjct: 1256 RSWAGGLSLTQAWNPADRLIGQSCTAGTRSLLRRTYTWRPDGYLSGVEDTTAGPSHYTLD 1315 Query: 151 SLADTLQQSGGEDGGSVVFPPVLVQ--------------MLDRLESEILADRVSEESRRW 196 + Q S + P Q +R + + Sbjct: 1316 PVGRVTQVRAATWQESYAYDPAGNQAHATWPHQHPGADSTGERAYTGTQIRAAGTTRYEY 1375 Query: 197 LASCGLTVEQ----------------MQNQMDPVYTPARKIHLYHCDHRG--LPLALVST 238 A+ T+ Q ++++ V TP Y D G ++ Sbjct: 1376 DAAGRTTLRQKARLPRKPDTWRYTWDTEDRLTRVVTPDGTTWHYRYDPLGRRTAKQRLAA 1435 Query: 239 EGATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEESGL 280 +G + G L E++ R +E+GL Sbjct: 1436 DGTVAEETRFTWHGATLIEQSTTSTDWTGRQNLTWDHDETGL 1477 Score = 63.7 bits (153), Expect = 2e-08, Method: Composition-based stats. Identities = 47/285 (16%), Positives = 79/285 (27%), Gaps = 48/285 (16%) Query: 12 HYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVE---- 67 + + +D RLT+ T+ T Y YD+ RL+ T E Sbjct: 1078 RHEFEHDAALRLTKVTN---------PQGLTWNYTYDAAGRLIAETDFDDRRVAYEHDTA 1128 Query: 68 -------------SRYLYDPLGRRVAK----RVWRRERDLTGWMSLSRKPQV---TWYGW 107 + Y YD LGR VA+ +V D G + + P Y Sbjct: 1129 GQLLSRTDPMGRRTDYTYDALGRLVAQDAAGQVSTFRWDPDGELLEAVGPDTELNRAYDP 1188 Query: 108 DGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSV 167 G R+ + D + Y L T G + + + G +V Sbjct: 1189 LG-RMLSETVDGRTLHLAYDAA--GQLTSRRTPAGAETAYAYDAAGNRTTLTTGGRELTV 1245 Query: 168 VFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKI------ 221 ++ + + + R + + + + P + Sbjct: 1246 AHDASGREIRRSWAGGLSLTQAWNPADRLIGQSCTAGTRSLLRRTYTWRPDGYLSGVEDT 1305 Query: 222 ----HLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQ 262 Y D G + + YD GN + PHQ Sbjct: 1306 TAGPSHYTLDPVGRVTQV--RAATWQESYAYDPAGNQAHATWPHQ 1348 Score = 61.7 bits (148), Expect = 6e-08, Method: Composition-based stats. Identities = 64/339 (18%), Positives = 94/339 (27%), Gaps = 82/339 (24%) Query: 9 RDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRT--------- 59 D Y +D G+L +TD + R Y YD+ RLV Sbjct: 1117 DDRRVAYEHDTAGQLLSRTDPM---------GRRTDYTYDALGRLVAQDAAGQVSTFRWD 1167 Query: 60 ------QYAEPLVESRYLYDPLGRRVAKRVWRRE----RDLTGWMSLSRKP--QVTWYGW 107 + P E YDPLGR +++ V R D G ++ R P T Y + Sbjct: 1168 PDGELLEAVGPDTELNRAYDPLGRMLSETVDGRTLHLAYDAAGQLTSRRTPAGAETAYAY 1227 Query: 108 DGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSV 167 D T R T+ S + R + G L+ TQ + AD L G Sbjct: 1228 DAAGNRTTLTTGGRELTVAHDASGREIRR--SWAGGLSLTQAWNPADRLIGQSCTAGTRS 1285 Query: 168 VFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCD 227 + D S + +T + + Y D Sbjct: 1286 LLRRTYTWRPDGYLSGVEDTTAGPSHYTLDPVGRVTQVRAATWQES----------YAYD 1335 Query: 228 HRGLPLALV--------STEGATEW-----------CAEYDEWGNLLNEENPHQLQQL-- 266 G + G + EYD G + ++ Sbjct: 1336 PAGNQAHATWPHQHPGADSTGERAYTGTQIRAAGTTRYEYDAAGRTTLRQKARLPRKPDT 1395 Query: 267 IRLPGQQYDEE-----------SGLYYNRHRYYDPLQGR 294 R +D E + +Y YDP GR Sbjct: 1396 WRYT---WDTEDRLTRVVTPDGTTWHYR----YDP-LGR 1426 Score = 54.4 bits (129), Expect = 8e-06, Method: Composition-based stats. Identities = 42/287 (14%), Positives = 76/287 (26%), Gaps = 49/287 (17%) Query: 8 ARDAHYLYRYDRHG-----------RLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHY 56 + +D G RL ++ + D R Y Y + L Sbjct: 712 RNGNRITFTHDASGAPVEVLHSGGYRLRLTSENGRITGLYAGDVRVMGYGY-TDGHLTET 770 Query: 57 TRTQYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQ 116 T + R++YD GR + + + DR+T + Sbjct: 771 T----GSSGLPLRFVYDRAGRITSWTDTNNRWFSYAYDAF-------------DRVTAER 813 Query: 117 NDRTRIQTIYQPGSFTPL---IRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVL 173 + P +++ T T R + + Q G D + Sbjct: 814 GEGGHFTFRIGYDETDPDFPGLKITTLTSPDGAVTRYLVDEAHQVVGEIDAAGAISRTAY 873 Query: 174 VQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPL 233 Q+ + D + + G ++ + D +G P+ Sbjct: 874 DQVG---RTVAETDPLGRTTGFRYDEHGHLTAVIRPDGSEIGA--------VLDAQGNPV 922 Query: 234 ALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEESGL 280 + GA W +D GN + +P YD GL Sbjct: 923 QITGPGGA-VWRQTFDAAGNRTSLTDPLDATTRY-----LYDARGGL 963 Score = 54.4 bits (129), Expect = 9e-06, Method: Composition-based stats. Identities = 58/325 (17%), Positives = 89/325 (27%), Gaps = 61/325 (18%) Query: 13 YLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYLY 72 + YDR GR+T TD + R Y YD+ R+ + R Y Sbjct: 778 LRFVYDRAGRITSWTDT---------NNRWFSYAYDAFDRVTA---ERGEGGHFTFRIGY 825 Query: 73 D----------------PLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQ 116 D P G + + + G + + T Y G T + Sbjct: 826 DETDPDFPGLKITTLTSPDGAVT-RYLVDEAHQVVGEIDAAGAISRTAYDQVGR--TVAE 882 Query: 117 NDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQM 176 D T ++ L V G Q G G V Q Sbjct: 883 TDPLGRTTGFRYDEHGHLTAVIRPDGSEIGA-VLDAQGNPVQITGPGGA------VWRQT 935 Query: 177 LDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALV 236 D + + + R+L + + + + CD GLP+ + Sbjct: 936 FDAAGNRTSLTDPLDATTRYLYDARGGLLAVTDALGATTR-------VRCDGAGLPVEIT 988 Query: 237 STEGATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEESGLYYNRHRY-------YD 289 GAT + D G + E +P ++ E L YD Sbjct: 989 DPLGATT-RYQRDTLGRAVAETDPLGAITRY-----EWSPEGRLLRRTAPDGSAESWTYD 1042 Query: 290 PLQGRYITQDPIGLKGGWNFYQYPL 314 DP+G G Y+Y Sbjct: 1043 GEGNCLTHTDPVG---GTAAYEYTH 1064 >UniRef50_C6M9F5 RHS family protein n=2 Tax=Bacteria RepID=C6M9F5_NEISI Length = 448 Score = 181 bits (460), Expect = 4e-44, Method: Composition-based stats. Identities = 68/303 (22%), Positives = 114/303 (37%), Gaps = 23/303 (7%) Query: 26 KTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYLYDPLGRRVAKRVWR 85 K + + R + Y D++ + Y + Y YD LG + + + Sbjct: 38 KPQDRLKSIFRRSFPISDLYLPDARSAVTDNRLKTYNG----TTYYYDDLGNLIHRELAD 93 Query: 86 RERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELA 145 E + + + + + D T+ Y + I ++ Sbjct: 94 GEMQNYFYDLHDQLVKAEIF----------KKDGTKETWSYTYDALGRRI-GKSRLKTSQ 142 Query: 146 KTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVE 205 + S L + E+ V+ + + ++S LA Sbjct: 143 EVSETSFPHDLSGNDLENQTRFVWDGSHLLQEIHPDGRYTYIYADQDSYEPLA------- 195 Query: 206 QMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEEN-PHQLQ 264 Q+++ ++IH +HCD G+P + +G W Y WG L E Sbjct: 196 QVRDWATEDGESRQQIHYFHCDQIGIPREMTDKDGNLLWFGNYTGWGRLKEETKVTDSAY 255 Query: 265 QLIRLPGQQYDEESGLYYNRHRYYDPLQGRYITQDPIGLKGGWNFYQYPLNPVQYIDSMG 324 Q RL Q D E+GL+YN RYY+P GR++ QDPIGL+GG N Y++ N ++D G Sbjct: 256 QPFRLQNQYADRETGLHYNFFRYYEPDAGRFVNQDPIGLEGGENLYKFAPNAQNWVDIFG 315 Query: 325 LAS 327 L S Sbjct: 316 LWS 318 Score = 101 bits (250), Expect = 8e-20, Method: Composition-based stats. Identities = 50/239 (20%), Positives = 77/239 (32%), Gaps = 24/239 (10%) Query: 4 DNRIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAE 63 DNR+ Y YD G L + D Y YD +LV + Sbjct: 67 DNRLKTYNGTTYYYDDLGNLIHRE---------LADGEMQNYFYDLHDQLVKAEIFKKDG 117 Query: 64 PLVESRYLYDPLGRRVAKRVWRRERDLTGW-----MSLSRKPQVTWYGWDGDRLTTIQND 118 Y YD LGRR+ K + ++++ +S + T + WDG L + Sbjct: 118 TKETWSYTYDALGRRIGKSRLKTSQEVSETSFPHDLSGNDLENQTRFVWDGSHLLQEIHP 177 Query: 119 RTRIQTIYQP-GSFTPLIRVE---TATGELAKTQRRSLADTL---QQSGGEDGGSVVFPP 171 R IY S+ PL +V T GE + D + ++ +DG + F Sbjct: 178 DGRYTYIYADQDSYEPLAQVRDWATEDGESRQQIHYFHCDQIGIPREMTDKDGNLLWFGN 237 Query: 172 VLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRG 230 RL+ E + + R + Y P + D G Sbjct: 238 YTGW--GRLKEETKVTDSAYQPFRLQNQYADRETGLHYNFFRYYEPDAG-RFVNQDPIG 293 >UniRef50_UPI0001B56FBA YD repeat-containing protein n=1 Tax=Streptomyces sp. AA4 RepID=UPI0001B56FBA Length = 1624 Score = 181 bits (459), Expect = 5e-44, Method: Composition-based stats. Identities = 75/338 (22%), Positives = 116/338 (34%), Gaps = 35/338 (10%) Query: 3 PDNRIARDAHYLYRYDR---------HGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRL 53 + +D Y YR D G D+ + +Y YD RL Sbjct: 1050 ANGEFGQDRQYHYRPDGLPDRIDDGTAGSRWLAMDVRGRVISVRARGWNEQYAYDPTGRL 1109 Query: 54 VHYTRTQYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLT 113 V E D GRR G S+ + Y +D Sbjct: 1110 VDADWPAPEEE--------DRRGRR------------AGPASVITEAGGVRYTYDQAGRM 1149 Query: 114 TIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQ-QSGGEDGGSVVFPPV 172 + Y G L+ VE G + L ++ + DG +++ Sbjct: 1150 RTRRHEDGRTWTYTWGPLNRLVAVEVPDGTRWRYTYDPLGRRIRKEHFAADGTTLLERVD 1209 Query: 173 LVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPAR---KIHLYHCDHR 229 + L + E+ W V +Q + R + + Sbjct: 1210 FAWDGETLAEATTSGPAGAETTVWDYEPDSFVPLLQRRRTASADQQRVDEQFFAIVAEPS 1269 Query: 230 GLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEESGLYYNRHRYYD 289 G P L+ G W A +G ++ E + +R GQ +DEE+GL+YN HRYYD Sbjct: 1270 GTPTELLDDRGEIAWQARSSLFGVVVAESGGTGI--PLRFQGQYFDEETGLHYNFHRYYD 1327 Query: 290 PLQGRYITQDPIGLKGGWNFYQYPLNPVQYIDSMGLAS 327 P+ RY++ DP+GL GG + + Y NP +D +GL Sbjct: 1328 PVLARYLSPDPLGLGGGLDPHAYVSNPHVSVDPLGLVG 1365 Score = 77.9 bits (190), Expect = 7e-13, Method: Composition-based stats. Identities = 55/285 (19%), Positives = 85/285 (29%), Gaps = 52/285 (18%) Query: 11 AHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAE------- 63 A Y +D RL +TD + R Y YD + LV R E Sbjct: 631 AARSYEWDALDRLVGETDEL---------GRRRAYRYDEMNNLVALRRPDGTELTIERDD 681 Query: 64 ----------PLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLT 113 P VE+R+ YD G + VT +G LT Sbjct: 682 FGQAVRMVEAPGVETRWEYDERGNVTRVVEPGGGTTSYTYDEWGHIASVT--DPNGSTLT 739 Query: 114 TIQNDRTR---------IQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDG 164 + +D T Y F L + G + ++ L DG Sbjct: 740 VVSDDAGNPITVTDARGATTAYAYDCFGRLSAIVDPNGATEEF-GYTIDGALSWHRLPDG 798 Query: 165 GSVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLY 224 + + + +RL S+ + E + ++ E + YT ++ L Sbjct: 799 STEEWRYDG-EGNNRLHSDAASAITQREMTHFDL---VSAEIRPDGTRLEYTYDTELRL- 853 Query: 225 HCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRL 269 A+ + +G W EYD GNL E + R Sbjct: 854 --------TAVTNEQGQ-VWRYEYDLAGNLSRETDFGGASSSYRY 889 Score = 77.9 bits (190), Expect = 8e-13, Method: Composition-based stats. Identities = 51/269 (18%), Positives = 84/269 (31%), Gaps = 42/269 (15%) Query: 13 YLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYLY 72 + Y YD GR+ E TD + +R+HYD + R+V RT+ + + Y Sbjct: 548 FRYAYDSSGRIVEWTDR---------NGEWYRFHYDREGRVV---RTEGSGDCLTVTMEY 595 Query: 73 ----------DPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDG-DRLTTIQNDRTR 121 D LGRR A +R + Y WD DRL ++ R Sbjct: 596 DLAARITHVVDSLGRRSA---YRLNETGRVVREVDPTGAARSYEWDALDRLVGETDELGR 652 Query: 122 IQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLE 181 + Y+ L+ + G +R ++ + + +E Sbjct: 653 -RRAYRYDEMNNLVALRRPDGTELTIERDDFGQAVRMVEAPGVETRWEYDERGNVTRVVE 711 Query: 182 SEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGA 241 + + +AS V P D G P+ + GA Sbjct: 712 PGGGTTSYTYDEWGHIAS--------------VTDPNGSTLTVVSDDAGNPITVTDARGA 757 Query: 242 TEWCAEYDEWGNLLNEENPHQLQQLIRLP 270 T YD +G L +P+ + Sbjct: 758 TTA-YAYDCFGRLSAIVDPNGATEEFGYT 785 Score = 56.0 bits (133), Expect = 3e-06, Method: Composition-based stats. Identities = 69/396 (17%), Positives = 115/396 (29%), Gaps = 62/396 (15%) Query: 5 NRIARDAHYLYRYDRHGR------------LTEKTDLIPEGVIRTDDERTHRYHYDSQHR 52 +R+ + +RYD G E T D Y YD++ R Sbjct: 793 HRLPDGSTEEWRYDGEGNNRLHSDAASAITQREMTHFDLVSAEIRPDGTRLEYTYDTELR 852 Query: 53 LVHYTRTQYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRL 112 L T Q RY YD G L+ Y G+ L Sbjct: 853 LTAVTNEQG----QVWRYEYDLAGN------------LSRETDFGGASSSYRYNAAGE-L 895 Query: 113 TTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPV 172 T I+N + T+ + + E G + R D L + D G+ Sbjct: 896 TEIRNAEGEVITLRRD--VRGNLVEEIVEGPSGTLRTRFEYDVLGELIALDDGTTRIEYT 953 Query: 173 -------LVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYT-PARKIHLY 224 + + ++ D + RR S +V + + P A + + Sbjct: 954 RDAASRIVRETVNGRTVRSEFDSSGNQIRRQTPSGAESVWEYREASVPAAVRAAGRTTRF 1013 Query: 225 HCDHRGL-PLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEESGLYY- 282 D G + + + A + G L +Q +R ++ ++ +Y Sbjct: 1014 EYDPAGRETVRVFGQDAAIL--RSWTPAGRLA--------RQAVRSANGEFGQDRQYHYR 1063 Query: 283 ---NRHRYYDPLQG-RYITQDPIG-----LKGGWNFYQYPLNPV-QYIDSMGLASKYGHL 332 R D G R++ D G GWN QY +P + +D+ A + Sbjct: 1064 PDGLPDRIDDGTAGSRWLAMDVRGRVISVRARGWNE-QYAYDPTGRLVDADWPAPEEEDR 1122 Query: 333 NNGGYGARPNKPPTPDPSKLPDIAKQLRLPYPIDQA 368 G D A ++R D Sbjct: 1123 RGRRAGPASVITEAGGVRYTYDQAGRMRTRRHEDGR 1158 >UniRef50_Q2T5B9 YD repeat protein n=39 Tax=Proteobacteria RepID=Q2T5B9_BURTA Length = 1553 Score = 181 bits (458), Expect = 6e-44, Method: Composition-based stats. Identities = 86/381 (22%), Positives = 140/381 (36%), Gaps = 46/381 (12%) Query: 13 YLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYLY 72 Y +D G + + R+ YD++ ++V + RY Y Sbjct: 1059 RHYEWDVAGHCVGMQEERKGLPVEAG-----RWRYDARGQMVDAYHERTESRSARERYRY 1113 Query: 73 DPLGRRVAKRVWR---RERDLTGWMSLSRKPQVTWYGWDGDRLTTIQ--NDRTRIQTIYQ 127 D LG V +++ R D G +S P V Y G + + + Y+ Sbjct: 1114 DALGHVVEQQIDGGEIRTHDYLGDQLISAGPNVYKYDARGRMVARTELRDGFRPRSWRYR 1173 Query: 128 PGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSV-----VFPPVLVQMLDRLES 182 F L V T GE + + + + G + +M++ + Sbjct: 1174 WDDFDRLREVTTPGGERWAYRYDAFGRRISKVCTHGGRRNRLKRAAYLWCGSRMIEAWRT 1233 Query: 183 EILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKI---HLYHCDHRGLPLALVSTE 239 D + +RW + Q ++ P + + CD G P L S++ Sbjct: 1234 YDERDGSRHDIQRWHYRPSTHIPLAQERLRFDDQPDPQTSEWYPLACDPNGAPHTLYSSD 1293 Query: 240 GATEWCAEYDEWGNLLNEENPHQLQQL---------------------IRLPGQQYDEES 278 G W A WG+ ++ L+ +R PGQ DEES Sbjct: 1294 GRALWRARRTAWGDTAGDDGRDSLRSAVREQLRLGHRDSDEFDPPDCELRFPGQWADEES 1353 Query: 279 GLYYNRHRYYDPLQGRYITQDPIGLKGGWNFYQYPLNPVQYIDSMGLASKYGHLNNGG-- 336 GL+YN HRYYDP G+Y++ DP+GL GG + Y +P+Q+ D GL N+ Sbjct: 1354 GLHYNLHRYYDPSTGQYLSADPVGLAGGLRTHAYVHDPMQWGDPFGLQGYDTVRNHRAGN 1413 Query: 337 -----YGARPNKPPTPDPSKL 352 G R N P +P+++ Sbjct: 1414 KQIDYDGQRWNVPKGKNPTEV 1434 Score = 62.5 bits (150), Expect = 3e-08, Method: Composition-based stats. Identities = 56/301 (18%), Positives = 87/301 (28%), Gaps = 55/301 (18%) Query: 2 WPDNRIARDAHY-LYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQ 60 W R YRYD GR + D+ R RY ++ +L+ T Sbjct: 608 WLSARTDPIGRVSQYRYDARGRPVKVIDVY---------GRESRYRWNGAGQLIERTDPF 658 Query: 61 YA---------------EPLVESRYLYDPLGRRVAKR-------VWRRERDLTGWMSLSR 98 A P E+R+ YDP G V++ WR + Sbjct: 659 GALRWHFSAEGNLVAFEGPSGETRFRYDPRGLLVSRTDPDGATYAWRHDEAGRPDRWTDP 718 Query: 99 KPQVTWYGWD--GDRLTTIQNDRTRIQTIYQPGSFTP-------------LIRVETATGE 143 + T D G + R Y+PG P + R + Sbjct: 719 LGRHTHLDRDRYGRLRSRTDAAGHRTVYGYEPGPSNPREALSSVTYPDGAIARFHYDSEG 778 Query: 144 LAKTQRRSLADTLQQSGGEDG--GSVVFPPVLVQMLDRLESEILADRVSEESRRWLASCG 201 + + L ++ + G SV P V R + L + +RW Sbjct: 779 MLREAVNPLGHGIRYTWGAFDLLASVTDPSGAVTQYHRDGTARLTGVTNALGQRWTLERD 838 Query: 202 LTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPH 261 Q+ + D R Y + G +G EYD + L++ P Sbjct: 839 AA-GQVIAETDWRGRCTR----YVRNRLGQVTEKHLPDG-VVLRYEYDAYDRLISLAGPL 892 Query: 262 Q 262 Q Sbjct: 893 Q 893 Score = 59.0 bits (141), Expect = 4e-07, Method: Composition-based stats. Identities = 44/273 (16%), Positives = 71/273 (26%), Gaps = 31/273 (11%) Query: 12 HYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYH-YDSQHRLVHYTRTQYAEPLVE--- 67 + YD R T D + R D + D R++H + + Sbjct: 556 DDRFEYDDEQRRTTYIDALGHRHQRWFDAQNRLIRSQDPLGRVMHASFDERGWLSARTDP 615 Query: 68 ----SRYLYDPLGR---------RVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTT 114 S+Y YD GR R ++ W L + +G+ L Sbjct: 616 IGRVSQYRYDARGRPVKVIDVYGRESRYRWNGAGQLIERTDP-FGALRWHFSAEGN-LVA 673 Query: 115 IQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLV 174 + + Y P L+ T R A + G Sbjct: 674 FEGPSGETRFRYDP---RGLLVSRTDPDGATYAWRHDEAGRPDRWTDPLGRHT------- 723 Query: 175 QMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLA 234 LDR L R R + + + V P I +H D G+ Sbjct: 724 -HLDRDRYGRLRSRTDAAGHRTVYGYEPGPSNPREALSSVTYPDGAIARFHYDSEGMLRE 782 Query: 235 LVSTEGATEWCAEYDEWGNLLNEENPHQLQQLI 267 V+ G + + L + +P Sbjct: 783 AVNPLGHGI-RYTWGAFDLLASVTDPSGAVTQY 814 Score = 57.9 bits (138), Expect = 9e-07, Method: Composition-based stats. Identities = 60/387 (15%), Positives = 118/387 (30%), Gaps = 76/387 (19%) Query: 6 RIARDAHY-----LYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQ 60 R+ R + Y+ GRL +R T DS+ L+ + Sbjct: 437 RLTRIEDRNGNTIDFEYNALGRLC---------TVRHSGGMTLWVTCDSRG-LLQSVSER 486 Query: 61 YAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRT 120 RY +D G+R+ R + + +G+ D Sbjct: 487 PGGEGELVRYRFD--GKRLTDVHSRFQGEF-------------HFGY---------TDEG 522 Query: 121 RIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRL 180 + G+ +R + +A +L D + E + + + Sbjct: 523 WLNHWRDSGATEVALRYDERARVIATRTNTALYDDRFEYDDEQRRTTYIDALGHRHQRWF 582 Query: 181 ESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEG 240 +++ R + R + + + + DP+ ++ Y D RG P+ ++ G Sbjct: 583 DAQNRLIRSQDPLGRVMHASFDERGWLSARTDPI----GRVSQYRYDARGRPVKVIDVYG 638 Query: 241 AT---EWCA------EYDEWGNLLNEENPHQLQQLIRLPGQQYDEESGLYYNRHRYYDPL 291 W D +G L + P E+ R R YDP Sbjct: 639 RESRYRWNGAGQLIERTDPFGALRWHFSAEGNLVAFEGPSG----ET-----RFR-YDPR 688 Query: 292 QGRYITQ-DPIGLKGGWNFYQYPLN----PVQYIDSMGLASKYGHLNNGGYGARPNKPPT 346 G +++ DP G Y + + P ++ D +G ++ HL+ YG ++ Sbjct: 689 -GLLVSRTDPDG-----ATYAWRHDEAGRPDRWTDPLG---RHTHLDRDRYGRLRSRTDA 739 Query: 347 PDPSKLPDIAKQLRLPYPIDQASSAPN 373 + P + + P+ Sbjct: 740 AGHRTVYGYEPGPSNPREALSSVTYPD 766 Score = 52.1 bits (123), Expect = 5e-05, Method: Composition-based stats. Identities = 62/349 (17%), Positives = 104/349 (29%), Gaps = 79/349 (22%) Query: 8 ARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHY-DSQHRLVHYTRTQYAEPLV 66 +RYD G L +TD DE + D R H R +Y Sbjct: 676 GPSGETRFRYDPRGLLVSRTDPDGATYAWRHDEAGRPDRWTDPLGRHTHLDRDRYGRLRS 735 Query: 67 ESRYLYDPLGRRV-----------------------AKRVWRRERDLTGWMSLSRKPQVT 103 + D G R A + + + +++ Sbjct: 736 RT----DAAGHRTVYGYEPGPSNPREALSSVTYPDGAIARFHYDSEGMLREAVNPLGHGI 791 Query: 104 WYGWDG-DRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGE 162 Y W D L ++ + + ++ G+ L V A G+ +R + + ++ Sbjct: 792 RYTWGAFDLLASVTDPSGAVTQYHRDGT-ARLTGVTNALGQRWTLERDAAGQVIAETDWR 850 Query: 163 DGGSVVFPPVLVQMLDRLESE---------------ILADRVSEESRRWLASCGLTVEQM 207 + L Q+ ++ + LA + + + W + LT Q+ Sbjct: 851 GRCTRYVRNRLGQVTEKHLPDGVVLRYEYDAYDRLISLAGPLQKHTFAWGSRGQLTRAQV 910 Query: 208 QNQMDPVY---------------------TPARKIHLYHCDHRGLPLALVSTEGATEWCA 246 + D + + + Y D G P +L + G T W Sbjct: 911 WERSDDADAWRADNDVCLEYDDAFRLIEESQSGQAIRYEYDVMGRPASLGTPSGQTRWQ- 969 Query: 247 EYDEWGNL-LNEENPHQLQQLIRLPGQQYDEESGLYYNRHRYYDPLQGR 294 YD G L + E N HQ R YD L HR Y P + R Sbjct: 970 -YDLAGQLDVIESNGHQ----FRFG---YDV---LGRESHRRYLPTEQR 1007 >UniRef50_C1B7W9 Putative uncharacterized protein n=1 Tax=Rhodococcus opacus B4 RepID=C1B7W9_RHOOB Length = 514 Score = 180 bits (457), Expect = 7e-44, Method: Composition-based stats. Identities = 82/346 (23%), Positives = 120/346 (34%), Gaps = 58/346 (16%) Query: 4 DNRIARDA----HYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRT 59 D+ I RDA H + D GR+T + D T +Y YD + Sbjct: 124 DHNIRRDAIDAVHRSFDLDPAGRIT---------AVVQDGHPTEQYSYDPLGNITDSGSD 174 Query: 60 QYAE------PLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLT 113 + +R+ YD +GR + K R S P V Sbjct: 175 RREYLGNLLVRDGRTRFHYDAVGRLIRKTTTR----------PSHAPDV----------- 213 Query: 114 TIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVL 173 Y+ +F L V T G +L + + G+V ++ Sbjct: 214 ----------WHYRYNAFDQLTDVTTPDGPHWHYTYDALGRRTTKHRLDHDGAVAVAELI 263 Query: 174 VQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPL 233 D + +L + + RW G Q + + + D G P+ Sbjct: 264 RYTWDG--THLLEQTAGDTTTRWTYQHGSYTPLT--QAVDQGSVDAEFYAIVTDLVGTPV 319 Query: 234 ALVST-EGATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEESGLYYNRHRYYDPLQ 292 LV + A D WG+ +R PGQ +D E+GL+YN HRYY+P Sbjct: 320 ELVDPRTADSVADATTDLWGHTTWR---GATDTHLRFPGQYHDPETGLHYNLHRYYNPHT 376 Query: 293 GRYITQDPIGLKGGWNFYQYPLNPVQYIDSMGLASKYGHLNNGGYG 338 RY+TQDP+GL N YP NP + D +GL G G Sbjct: 377 ARYLTQDPLGLAPSPNPNTYPHNPTGWTDPLGLVPCPPTTIEGPNG 422 Score = 98.3 bits (243), Expect = 6e-19, Method: Composition-based stats. Identities = 44/229 (19%), Positives = 65/229 (28%), Gaps = 20/229 (8%) Query: 2 WPDNRIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQY 61 + N + RD + YD GRL KT P Y Y++ +L T Sbjct: 178 YLGNLLVRDGRTRFHYDAVGRLIRKTTTRPSHA-----PDVWHYRYNAFDQLTDVTTPDG 232 Query: 62 AEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTR 121 Y YD LGRR K + + ++ Y WDG L T Sbjct: 233 PH----WHYTYDALGRRTTKHRLDHDGAVA-------VAELIRYTWDGTHLLEQTAGDTT 281 Query: 122 IQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLE 181 + YQ GS+TPL + A+ D + + L Sbjct: 282 TRWTYQHGSYTPLTQAVDQGSVDAEFYAIVTDLVGTPVELVDPRTA---DSVADATTDLW 338 Query: 182 SEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRG 230 ++ R+ + + Y P D G Sbjct: 339 GHTTWRGATDTHLRFPGQYHDPETGLHYNLHRYYNPHTA-RYLTQDPLG 386 >UniRef50_D1JME6 Rhs family protein n=22 Tax=Bacteroides RepID=D1JME6_9BACE Length = 1494 Score = 180 bits (457), Expect = 8e-44, Method: Composition-based stats. Identities = 91/389 (23%), Positives = 129/389 (33%), Gaps = 53/389 (13%) Query: 13 YLYRYDRHGRLTEKTDLIPEGVIRTDDERTH--RYHYDSQHRLVHYTRTQYAEPLVESRY 70 + YD GRL + R D H RY + RL+ ++ E+RY Sbjct: 1025 RSFAYDDIGRLV-------DARTRKDSRTRHMRRYRWGVADRLLSVEDSRRG----ETRY 1073 Query: 71 LY---------------------DPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDG 109 Y D G R R L G Y DG Sbjct: 1074 SYTPTGQLERAEYPDGREQWRKSDQTGNLYPDPDMRLRRYLGGGRLEQDGEWHCEYDADG 1133 Query: 110 D---RLTTIQN--DRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDG 164 + R D + + Y+ + L +V + +L L +S G Sbjct: 1134 NLTERYLGTGRWLDGKKDRWRYRWNADGSLAKVVRPDKREVEFTYDALGRRLSKSFGTTV 1193 Query: 165 GSVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKI--- 221 V+ + + S RW + + + P I Sbjct: 1194 TRWVWNGNVPLHQWKQ-----HREYSVMEDRWNTDTEHRDMTVWLFDEDSFVPVAMIKEG 1248 Query: 222 --HLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEESG 279 + D G P TEG W D GN++ E + GQ YD E+G Sbjct: 1249 RSYSILTDQLGTPTEAYDTEGNEVWSRVLDMDGNVIEETGNKGMV-PFLFQGQYYDRETG 1307 Query: 280 LYYNRHRYYDPLQGRYITQDPIGLKGG-WNFYQYPLNPVQYIDSMGLASKYGHLNNGGYG 338 L YNR RYY P G Y++QDPIGL GG N Y Y + +IDS GL Y +N+ G Sbjct: 1308 LAYNRFRYYSPKMGVYVSQDPIGLGGGILNLYGYVDDTNVWIDSFGLDWNYVLINSKGNV 1367 Query: 339 ARPNKPPTPDPSKLPDIAKQLRLPYPIDQ 367 + D + L D+A++ D Sbjct: 1368 FYSGRAS--DNANLSDVARRHAGTKGADG 1394 Score = 61.4 bits (147), Expect = 7e-08, Method: Composition-based stats. Identities = 59/315 (18%), Positives = 92/315 (29%), Gaps = 50/315 (15%) Query: 9 RDAHYLYRYDRHGRLTEKTDLIPE-----------GVIRTDDERTHRYHYDSQHRLVHYT 57 + + YDR G L +T+ ++ R YD H L + Sbjct: 680 DGGTWEFGYDRSGNLVSRTNPEGAVTRMTYRNGAVASVKDPYGVVTRLAYDRFHNLTEAS 739 Query: 58 RTQYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYG-------WDGD 110 ++ L Y YD LGR V+ + + + R +V + +DG Sbjct: 740 DSRGNTSL----YGYDLLGRCVSVTNPKGAVQKREYDPVGRVVRVLDFDGNDIRLSYDGI 795 Query: 111 RLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFP 170 T D + Y L R G R + L++ E S F Sbjct: 796 DNLTEYRDNVQ-HVEYGYSGMWKLTRRRDHRG--VVNFRYDREERLRRVTNERLQSYEFA 852 Query: 171 PVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRG 230 LD + + R +L G V + P+ Y D Sbjct: 853 ------LDAVGNVTAEKGFDGAVRHYLRDRGGRVVRETL-------PSGTEREYGYDACS 899 Query: 231 LPLALVSTE-GATEWCAEYDEWGNLLN----EENPHQLQQLIRLPGQQ-YDEESGLYYNR 284 + G + Y G L+ E + LP ++ D + L Sbjct: 900 RVTRVSYPTAGDPDQTYAYGLSGRLVQASRGESTVEFAYNSLGLPTRETADGNTIL---- 955 Query: 285 HRYYDPLQGRYITQD 299 R YD GR +T D Sbjct: 956 -RTYD-HTGRILTLD 968 Score = 50.6 bits (119), Expect = 1e-04, Method: Composition-based stats. Identities = 42/279 (15%), Positives = 79/279 (28%), Gaps = 31/279 (11%) Query: 12 HYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVE---S 68 + Y + G L TD + D R+ R++ EP E + Sbjct: 461 GIRFDYTKEGLLRSITDSAGRRLRVEHDTRS--------GRILEICGPHPEEPEKEITLA 512 Query: 69 RYLYDPLGRRVAKRVWRRERDLTGWMS------LSRKPQVTWYGWDGD----RLTTIQND 118 Y YD G +R + + R ++ +DG R D Sbjct: 513 SYEYDADGNMTLQRNAAGDVMTYEYAGRLIVKETWRNGLAWYFEYDGTGVGSRCVHTWGD 572 Query: 119 RTRIQTIYQP--------GSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFP 170 S L G + K + + L + Sbjct: 573 GGIYDHRLTFREGVTEVLDSHGELTVYHHRGGLVWKKVDANGGEHLWRYDDSRRLLAQTD 632 Query: 171 PVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRG 230 P+ L R + S+ +++ ++N+ V TP + D G Sbjct: 633 PLGNSTLYRYDRWGNCTDSSDPCGGSVSAVYPAKGNLRNRPVSVTTPDGGTWEFGYDRSG 692 Query: 231 LPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRL 269 ++ + EGA Y G + + ++P+ + + Sbjct: 693 NLVSRTNPEGAVT-RMTYR-NGAVASVKDPYGVVTRLAY 729 >UniRef50_B9B9U8 YD repeat protein n=1 Tax=Burkholderia multivorans CGD1 RepID=B9B9U8_9BURK Length = 345 Score = 180 bits (457), Expect = 9e-44, Method: Composition-based stats. Identities = 89/323 (27%), Positives = 121/323 (37%), Gaps = 48/323 (14%) Query: 22 RLTEKTDLIPEGVIRTDDERT-HRYHYDSQHRLVHYT--RTQYAEPLVESRYLYDPLGRR 78 R T D + +R + R HYD R++ T R+ PLVE RY YD G Sbjct: 8 RRTGSGDDLHRETVRMLSSKVGQRTHYDPAGRVLQQTIQRSSSPAPLVERRYRYDAAG-- 65 Query: 79 VAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQPGSFTPLIRVE 138 ++ R E G + Y G RL + + + + P S Sbjct: 66 ---QLSRIEDSRKGGIDY-------RYDPVG-RLIEAISRVAKERFAFDPAS-------- 106 Query: 139 TATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSEESRRWLA 198 ++ D ++ S P + V E+ W + Sbjct: 107 ------------NIVDPVRSSDTPASRPRPVRPESTLPAEA------GPVVGIETPEWKS 148 Query: 199 SCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEE 258 S + Q P K+ YHCD G P L +G W A Y WG Sbjct: 149 SDRYVPQDDPLQKVPQRRADAKLFYYHCDQIGTPQLLTDDDGDVVWEASYKAWGEAREVI 208 Query: 259 NPHQ------LQQLIRLPGQQYDEESGLYYNRHRYYDPLQGRYITQDPIGLKGGWNFYQY 312 + +R GQQ DEE+GL+YNR+RYYDP GR+ + DPI L GG N YQY Sbjct: 209 ARASKAAGIVARNSLRFQGQQEDEETGLHYNRYRYYDPTSGRFTSADPIRLAGGSNVYQY 268 Query: 313 PLNPVQYIDSMGLASKYGHLNNG 335 LN V +ID G +S N Sbjct: 269 ALNLVSWIDPFGFSSTTDGTGNQ 291 >UniRef50_B4SV70 Rhs-family protein n=42 Tax=Enterobacteriaceae RepID=B4SV70_SALNS Length = 1359 Score = 179 bits (455), Expect = 1e-43, Method: Composition-based stats. Identities = 74/287 (25%), Positives = 115/287 (40%), Gaps = 26/287 (9%) Query: 45 YHYDSQHRLVHYTRTQYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQ--V 102 Y YD L + Y RY YD G + + + G + +R P Sbjct: 987 YSYDRSGYLTGRSGQMYDHD----RYYYDKAGNLL-------DNEGQGPVMNNRLPGCGR 1035 Query: 103 TWYGWDGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELA-KTQRRSLADTLQQSGG 161 YG++ T + D+ + + L RV + E G Sbjct: 1036 DRYGYNEWGELTTRRDQQL-----EWNAQGQLTRVISGNTETHYGYDALGRRIRKATYGR 1090 Query: 162 EDGGSVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKI 221 G + V RL E + + R +L + + +R++ Sbjct: 1091 HTGHTARSRTDFVWEGFRLLQE---NVQQQGWRTYLYDAEQPYTPVASVTGK--GESRQV 1145 Query: 222 HLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNE--ENPHQLQQLIRLPGQQYDEESG 279 YH D G P + + +G W +G + + Q +RLPGQ +D+E+G Sbjct: 1146 WYYHTDVTGTPQEVTAADGTLVWAGYIRGFGENAADISNSGAYFHQPLRLPGQYFDDETG 1205 Query: 280 LYYNRHRYYDPLQGRYITQDPIGLKGGWNFYQYPLNPVQYIDSMGLA 326 L+YN RYY P GR+++QDPIGL+GG N Y Y NP+++ID +GLA Sbjct: 1206 LHYNLFRYYAPECGRFVSQDPIGLRGGLNLYAYAPNPIRWIDPLGLA 1252 Score = 74.1 bits (180), Expect = 1e-11, Method: Composition-based stats. Identities = 39/223 (17%), Positives = 63/223 (28%), Gaps = 20/223 (8%) Query: 8 ARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTR--------- 58 H Y YD+ G L + P R RY Y+ L Sbjct: 1001 QMYDHDRYYYDKAGNLLDNEGQGPVMNNRLPGCGRDRYGYNEWGELTTRRDQQLEWNAQG 1060 Query: 59 --TQYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQ 116 T+ E+ Y YD LGRR+ K + R T T + W+G RL Sbjct: 1061 QLTRVISGNTETHYGYDALGRRIRKATYGRHTGHTARS-------RTDFVWEGFRLLQEN 1113 Query: 117 NDRTRIQ-TIYQ-PGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLV 174 + + +Y +TP+ V + Q G++V+ + Sbjct: 1114 VQQQGWRTYLYDAEQPYTPVASVTGKGESRQVWYYHTDVTGTPQEVTAADGTLVWAGYIR 1173 Query: 175 QMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTP 217 + + + R + + Y P Sbjct: 1174 GFGENAADISNSGAYFHQPLRLPGQYFDDETGLHYNLFRYYAP 1216 Score = 56.3 bits (134), Expect = 2e-06, Method: Composition-based stats. Identities = 53/307 (17%), Positives = 85/307 (27%), Gaps = 37/307 (12%) Query: 3 PDNRIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHY-DSQHRLVHYTRTQY 61 P+ R+ + Y YD G++ +TD V+ D R Y D R Y + Sbjct: 594 PEGRVTQ-----YAYDEQGQMCSRTDAAGGTVVTAFDSRGQMTRYTDCSGRSTGYDHDED 648 Query: 62 AE-------PLVESRYLYDPLG-----RRVAKRVWRRERDLTGWMSLSRKP----QVTWY 105 R Y+ LG K+ R + G MS R+ + Y Sbjct: 649 GNLTRVTDAEGKVVRISYNRLGLPETVNSPGKQQDRYTWNALGLMSSHRRITGSVESWRY 708 Query: 106 GWDGDRLTTIQNDRTRIQTIYQPGSFTPL------IRVETATGELAKTQRRSLADTLQQS 159 G ++ + Y P + + + R D L ++ Sbjct: 709 TPRGLLAAHTDEEKRETRWQYTPEGRVAALTNGNGAQYRFSHDADGRLVREVRPDGLSRT 768 Query: 160 GGEDGGSVVFPPVLVQMLDRLESEILA-DRVSEESRRWLASCGLTVE--QMQNQMDPVYT 216 D + + E D + R C T ++ T Sbjct: 769 FILDDSGYLTAIQTTGTQGGVRRETQQRDALGRLLRTENEHCQRTFSYNRLDQITAVTLT 828 Query: 217 PARKIHLYHCDHRGLPLALVSTEGATEW-CAEYDEWGNLLNEENPHQLQQLIRLPGQQYD 275 P H G W AE+ G++ + + I LP Q+ Sbjct: 829 PTEAGQQQHRMQADTVRFEYDRSG---WLTAEHAGNGSIRYQRDALGNPTDITLPDGQHL 885 Query: 276 EESGLYY 282 LYY Sbjct: 886 TH--LYY 890 Score = 49.8 bits (117), Expect = 2e-04, Method: Composition-based stats. Identities = 47/294 (15%), Positives = 85/294 (28%), Gaps = 39/294 (13%) Query: 8 ARDAHYLYRYDRHGRLTEKTDLIPEGVIR------------TDDERTHRYHY---DSQHR 52 R YRYD +G+LT + V + T RY + D R Sbjct: 401 TRGNLVEYRYDDNGQLTGVVNRAGTQVRQFAYENGLMTAHSNAAGFTCRYRWQELDGAPR 460 Query: 53 LVHYTRTQYAEPLVESRYLYD-------PLGRRVAKRVWRRERDLTGWMSLSRKPQVTWY 105 + + + R+ YD GR+ W +R+ + + + Sbjct: 461 VTEHDTSDGEH----YRFDYDFAAGTTTVTGRQGESWQWWYDRETYITAHRTPGGGMYRF 516 Query: 106 GWDGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGG 165 ++ D Y+ +++ G + +TQ D + ++ +D Sbjct: 517 TYNEDHFPVNIELPGGRTVAYEYDIQNRVVKTTDPEGRVTQTQWNGEFDEITRTALDDDA 576 Query: 166 ------SVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMD---PVYT 216 + PV + ++ D + R A+ G V ++ Sbjct: 577 VWKTQYNAHGQPVQETDPEGRVTQYAYDEQGQMCSRTDAAGGTVVTAFDSRGQMTRYTDC 636 Query: 217 PARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRLP 270 R H D G + EG Y+ G L E +Q R Sbjct: 637 SGRSTGYDH-DEDGNLTRVTDAEGKVV-RISYNRLG--LPETVNSPGKQQDRYT 686 Score = 44.4 bits (103), Expect = 0.010, Method: Composition-based stats. Identities = 49/280 (17%), Positives = 85/280 (30%), Gaps = 33/280 (11%) Query: 5 NRIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEP 64 +R Y + Y+ + I RT Y YD Q+R+V T + Sbjct: 506 HRTPGGGMYRFTYN---------EDHFPVNIELPGGRTVAYEYDIQNRVVKTTDPEGRVT 556 Query: 65 LVESRYLYDPLGR--RVAKRVWRRERDLTG--WMSLSRKPQVTWYGWDGDRLTTIQNDRT 120 + +D + R VW+ + + G + +VT Y +D + D Sbjct: 557 QTQWNGEFDEITRTALDDDAVWKTQYNAHGQPVQETDPEGRVTQYAYDEQGQMCSRTDAA 616 Query: 121 RIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRL 180 + S + R T + L + +G V + L Sbjct: 617 GGTVVTAFDSRGQMTRY-TDCSGRSTGYDHDEDGNLTRVTDAEGKVVRISYNRL----GL 671 Query: 181 ESEILADRVSEESRRWLASCGLTVEQMQNQMDPV--YTPARKIHLYHCD----------- 227 + + ++ W A ++ + YTP R + H D Sbjct: 672 PETVNSPGKQQDRYTWNALGLMSSHRRITGSVESWRYTP-RGLLAAHTDEEKRETRWQYT 730 Query: 228 HRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLI 267 G AL + GA + +D G L+ E P L + Sbjct: 731 PEGRVAALTNGNGAQ-YRFSHDADGRLVREVRPDGLSRTF 769 Score = 42.5 bits (98), Expect = 0.034, Method: Composition-based stats. Identities = 34/245 (13%), Positives = 58/245 (23%), Gaps = 48/245 (19%) Query: 52 RLVHYTRTQYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDR 111 RL Q Y YD G LTG ++ + QV + ++ + Sbjct: 390 RLSRIELVQGGTRGNLVEYRYDDNG------------QLTGVVNRAGT-QVRQFAYE-NG 435 Query: 112 LTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPP 171 L T ++ Y+ RV + R + G + Sbjct: 436 LMTAHSNAAGFTCRYRWQELDGAPRVTEHDTSDGEHYRFD----YDFAAGTTTVTGRQGE 491 Query: 172 VLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGL 231 DR R+ + ++ P + Y D + Sbjct: 492 SWQWWYDRETYITAHRTPGGGMYRFTYNEDHFPVNIEL-------PGGRTVAYEYDIQNR 544 Query: 232 PLALVSTEGAT---------------------EWCAEYDEWGNLLNEENPHQLQQLIRL- 269 + EG W +Y+ G + E +P Sbjct: 545 VVKTTDPEGRVTQTQWNGEFDEITRTALDDDAVWKTQYNAHGQPVQETDPEGRVTQYAYD 604 Query: 270 -PGQQ 273 GQ Sbjct: 605 EQGQM 609 >UniRef50_B1HM94 Cell wall-associated protein n=5 Tax=Lysinibacillus sphaericus C3-41 RepID=B1HM94_LYSSC Length = 995 Score = 179 bits (455), Expect = 1e-43, Method: Composition-based stats. Identities = 79/379 (20%), Positives = 135/379 (35%), Gaps = 40/379 (10%) Query: 5 NRIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEP 64 N Y YD + ++++ T+ D+ + Y YD ++LV + Sbjct: 581 NSSTTWRTNEYEYDNNQQISKVTN----------DDGSVTYTYDVLNQLVEEQYSNG--- 627 Query: 65 LVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQT 124 + Y YD +G R +K + T + Q+ G G T N Sbjct: 628 -LTISYTYDTVGNRNSKTTLQNGSTTTTNYGYNDANQMKAVG--GKAYTVSPNGNVTNDG 684 Query: 125 IYQP--GSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLES 182 ++Q +F L V++ T + R S +G + + L + Sbjct: 685 VFQYVWNAFDQLTEVKSLTDATVASYRYDENGRRVYSKDNNGETY-------YRYNGLSN 737 Query: 183 EIL--ADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEG 240 ++L D ++ + M NQ + Y ++RG LAL +T G Sbjct: 738 QVLFEEDASGAITKAYTYDASGHPLTMTNQGS--------TYYYLTNYRGDVLALTNTNG 789 Query: 241 ATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEESGLYYNRHRYYDPLQGRYITQDP 300 YD WGN+L++ R G +YDE++ LYY RYY+P G ++++DP Sbjct: 790 DIVAQYTYDAWGNILSQSGTMAAINPYRYAGYRYDEKTKLYYLMARYYNPDTGVFLSRDP 849 Query: 301 IGLKG----GWNFYQYP-LNPVQYIDSMGLASKYGHLNNGGYGARPNKPPTPDPSKLPDI 355 + +N Y Y NPV +D G ++ ++ Y L Sbjct: 850 VRGDTMTPISFNGYSYTNNNPVMNVDPSGKFIQFVYIAEYIYIGYRTYKTYKKIKVLVKS 909 Query: 356 AKQLRLPYPIDQASSAPNV 374 + A+ A V Sbjct: 910 GLKFAETPAKHMANPARQV 928 Score = 41.3 bits (95), Expect = 0.084, Method: Composition-based stats. Identities = 35/276 (12%), Positives = 75/276 (27%), Gaps = 35/276 (12%) Query: 15 YRYDRHGRLTEKT------------DLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYA 62 Y DR + T D + T Y D + ++ Sbjct: 159 YSLDRTNNIVSVTSPEGTVTRYGLNDNFSVTKLFDPSGDTITYTLDGNYNVLSQKVVYTD 218 Query: 63 EPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSR---------KPQVTWYGWDGDRLT 113 Y+YD G ++ + + + + S + Y +D L Sbjct: 219 GATYTKDYIYDTKGNMLSTTDSKGVTESYTYNAYSNFLTLTDANGQTNTNTY-YDKGNLK 277 Query: 114 TIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVL 173 T + T Y + + +VE G++ + + +D V Sbjct: 278 TSTTPKGETTT-YTYNDYGDMTQVEYPDGKIETFNTNYENNQKTTTYRDDQLKVTTITTT 336 Query: 174 VQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPL 233 + L + +++ ++N++ V A K Y D Sbjct: 337 DFHGNILSYQDGKGEITKYRYN-----------LKNELVEVQDAANKTTTYTYDANSNLT 385 Query: 234 ALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRL 269 ++ + G +Y+ + E N + + Sbjct: 386 SVTNDAGKKT-SFKYNAQNAIEKETNAEEKVTTYKY 420 >UniRef50_UPI00019F17FA RhsC core protein with extension n=1 Tax=Citrobacter youngae ATCC 29220 RepID=UPI00019F17FA Length = 274 Score = 179 bits (455), Expect = 1e-43, Method: Composition-based stats. Identities = 85/121 (70%), Positives = 97/121 (80%) Query: 207 MQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQL 266 M NQ+ PVYTP RK HLYHCDHRGLPLAL++ +GA W AEYDEWGN+L E+NPH LQ+L Sbjct: 1 MLNQLAPVYTPRRKFHLYHCDHRGLPLALINQDGAISWRAEYDEWGNVLREDNPHNLQRL 60 Query: 267 IRLPGQQYDEESGLYYNRHRYYDPLQGRYITQDPIGLKGGWNFYQYPLNPVQYIDSMGLA 326 IRLPGQQ DEESGLYYNRHRY P Q RY+T DPIGL+GG N Y YP NP++ ID +GL Sbjct: 61 IRLPGQQCDEESGLYYNRHRYDSPGQDRYLTLDPIGLEGGLNPYTYPRNPIRKIDPLGLQ 120 Query: 327 S 327 Sbjct: 121 P 121 >UniRef50_C6CI62 YD repeat protein n=7 Tax=Enterobacteriaceae RepID=C6CI62_DICZE Length = 1475 Score = 179 bits (455), Expect = 1e-43, Method: Composition-based stats. Identities = 90/383 (23%), Positives = 131/383 (34%), Gaps = 63/383 (16%) Query: 4 DNRIARDAHYLYRYDRHGRLTE----------------KTDLIPEGVIRTDDERTHRYHY 47 D + YRYD G LT + + G + T R+HY Sbjct: 1013 DGHLLAAQTREYRYDGAGNLTGVRHNRDAEGYRLDATGRVQAVLSGGAGKPVDTTARFHY 1072 Query: 48 ------DSQHRLVHYTRTQYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQ 101 RL + + + ++ Y YD GR + K+V + +PQ Sbjct: 1073 TRTGLPQEAGRLTEWQAGRLVQHD-DTHYQYDRAGRLIRKQVVQ----------PGYRPQ 1121 Query: 102 VTWYGWDGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGG 161 V Y WD + + T + +Y+ F RV + A+ R Sbjct: 1122 VWQYRWDSRNQLRVVDTPTGERWLYRYDPFGR--RVGKRCDQKAEETRYQ---------- 1169 Query: 162 EDGGSVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKI 221 + + + L R R W+ + V Q + + Sbjct: 1170 -------WDGDQIAEIRHYRHGQLVAR-----RHWVYNGWELVVQQRQHTGGDWETD--- 1214 Query: 222 HLYHCDHRGLPLALVSTEGATEWCA-EYDEWGNLLNEENPHQLQQLIRLPGQQYDEESGL 280 G P AL + +G W A WG E++ + GQ D ESGL Sbjct: 1215 -FVTSSQNGTPQALFTPDGTLRWQAPTATLWGQRQAEKSESPDPG-LAFAGQLRDSESGL 1272 Query: 281 YYNRHRYYDPLQGRYITQDPIGLKGGWNFYQYPLNPVQYIDSMGLASKYGHLNNGGYGAR 340 YNR RYYDP G Y++ DPIG+ GG N Y Y NP+ ++D GLA +LN G Sbjct: 1273 CYNRFRYYDPAGGCYVSPDPIGIAGGENNYGYVQNPMCWVDPFGLAGCSSYLNAWGGRNA 1332 Query: 341 PNKPPTPDPSKLPDIAKQLRLPY 363 + S D K P Sbjct: 1333 KAFKNFWNNSSHADFMKAWNNPA 1355 Score = 65.2 bits (157), Expect = 5e-09, Method: Composition-based stats. Identities = 47/261 (18%), Positives = 79/261 (30%), Gaps = 32/261 (12%) Query: 15 YRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYLYDP 74 YR D GRL E + Y YD+ HRL + + +RY YD Sbjct: 478 YRQDEQGRLVEANATHAYHLY---------YEYDAAHRLTRW----HDNDQTWARYEYDT 524 Query: 75 LGRRVAKR------VWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQP 128 GR V R + + Q + +G++ L + + T Y+ Sbjct: 525 QGRCVYTTCADGFLTARFDYLPDRVVMTDGLGQRSEFGFNDLHLMSWEQSPLGHVTRYEY 584 Query: 129 GSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADR 188 L+R + G + + + G + D L + D Sbjct: 585 DEVGNLLREISPAGRVVEFGYLDDTGRVSTFTDASGHQWRYDYD-----DALRLCGVTDP 639 Query: 189 VSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWCAEY 248 + E RW+ E++ A + GL + G + +Y Sbjct: 640 LGRE-WRWVYDAEGNPERLTGPEASEVRFAWNRY-------GLLTQVSDAAGEVQARLQY 691 Query: 249 DEWGNLLNEENPHQLQQLIRL 269 D LL+ + Q +R Sbjct: 692 DHRQRLLSATDAESRTQQMRY 712 Score = 57.1 bits (136), Expect = 1e-06, Method: Composition-based stats. Identities = 53/315 (16%), Positives = 87/315 (27%), Gaps = 54/315 (17%) Query: 14 LYRYDRHGRLTEKTDLIPE-------------GVIRTDDERTHRYHYDSQHRLVHYTRTQ 60 Y YD G L + RY YD RL T Sbjct: 581 RYEYDEVGNLLREISPAGRVVEFGYLDDTGRVSTFTDASGHQWRYDYDDALRLCGVTDPL 640 Query: 61 YAEPLVESRYLYDPLGR--RVA-------KRVWRRERDLTGWMSLSRKPQVTWYGWDGDR 111 E R++YD G R+ + W R LT + + Q R Sbjct: 641 G----REWRWVYDAEGNPERLTGPEASEVRFAWNRYGLLTQVSDAAGEVQARLQYDHRQR 696 Query: 112 LTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTL--------------Q 157 L + + +R Q + + +++ + A G + R + L Q Sbjct: 697 LLSATDAESRTQQM-RYDMQDRVVQWQRADGARFRLGYRRASWALPEQLIRPDDKEEQRQ 755 Query: 158 QSGGEDGGSVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTP 217 + S V + ++L R E W + +Q+ + P + Sbjct: 756 YDRHNNLLSYVDGNGALWRQSFGPFDLLTARTDAEGHTWRYAYDKESQQLTTVIAPDGSR 815 Query: 218 ARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRL-PGQQYDE 276 + D G + G YDE G ++ N + Sbjct: 816 WQWW----LDADGRVVRERDMTGTET-HYGYDEDGLCVSVRNGEGDTRHFLYDARGLLLR 870 Query: 277 ES----GLYYNRHRY 287 E+ L+Y RY Sbjct: 871 ETAPDDTLHY---RY 882 Score = 56.7 bits (135), Expect = 2e-06, Method: Composition-based stats. Identities = 50/310 (16%), Positives = 99/310 (31%), Gaps = 44/310 (14%) Query: 3 PDNRIARDAH-----YLYRYDRHGR----------LTEKTDLIPEGVIRTDD-ERTHRYH 46 +R+ R Y YD GR LT + D +P+ V+ TD + + Sbjct: 503 AAHRLTRWHDNDQTWARYEYDTQGRCVYTTCADGFLTARFDYLPDRVVMTDGLGQRSEFG 562 Query: 47 YDSQHRLVHYTRTQYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQV---- 102 ++ H L+ + ++ +RY YD +G + + G++ + + Sbjct: 563 FNDLH-LMSWEQSPLGH---VTRYEYDEVGNLLREISPAGRVVEFGYLDDTGRVSTFTDA 618 Query: 103 ----TWYGW-DGDRLTTIQNDRTR-IQTIYQPGSFTPLIRVETATGELAKTQRRSLADTL 156 Y + D RL + + R + +Y + A+ R L + Sbjct: 619 SGHQWRYDYDDALRLCGVTDPLGREWRWVYDAEGNPERLTGPEASEVRFAWNRYGLLTQV 678 Query: 157 QQSGGEDGGSVVFP---PVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQM-- 211 + GE + + +L ++ + + + +W + G + Sbjct: 679 SDAAGEVQARLQYDHRQRLLSATDAESRTQQMRYDMQDRVVQWQRADGARFRLGYRRASW 738 Query: 212 ---DPVYTPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIR 268 + + P K D L+ V GA W + + L + R Sbjct: 739 ALPEQLIRPDDKEEQRQYDRHNNLLSYVDGNGAL-WRQSFGPFDLLTARTDAEGHT--WR 795 Query: 269 LPGQQYDEES 278 YD+ES Sbjct: 796 YA---YDKES 802 Score = 49.8 bits (117), Expect = 2e-04, Method: Composition-based stats. Identities = 49/254 (19%), Positives = 72/254 (28%), Gaps = 42/254 (16%) Query: 14 LYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYLYD 73 +YD RL TD + RT + YD Q R+V + R A R Y Sbjct: 688 RLQYDHRQRLLSATDA---------ESRTQQMRYDMQDRVVQWQRADGA----RFRLGY- 733 Query: 74 PLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQPGSFTP 133 RR + + K + Y + L+ + + + + P F Sbjct: 734 ---RRAS------WALPEQLIRPDDKEEQRQYDRHNNLLSYVDGNGALWRQSFGP--FDL 782 Query: 134 LIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILA-DRVSEE 192 L A G + + L DG LD + D E Sbjct: 783 LTARTDAEGHTWRYAYDKESQQLTTVIAPDGSR------WQWWLDADGRVVRERDMTGTE 836 Query: 193 SRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWG 252 + GL V + D + D RGL L + + YD G Sbjct: 837 THYGYDEDGLCVSVRNGEGD--------TRHFLYDARGLLLRETAPDDTL--HYRYDAVG 886 Query: 253 NLLNEENPHQLQQL 266 L + QL Sbjct: 887 RLTEVSSATAHVQL 900 Score = 48.6 bits (114), Expect = 5e-04, Method: Composition-based stats. Identities = 52/309 (16%), Positives = 88/309 (28%), Gaps = 35/309 (11%) Query: 8 ARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVE 67 A D YRYD GRLTE + + YD + R+V Sbjct: 873 APDDTLHYRYDAVGRLTEVSSATAHV----------QLDYDLRDRVVREWHNGTLLTRQV 922 Query: 68 SRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQ 127 D R V + + +L+ + Y G+ L +Q T+ Sbjct: 923 -----DDNARTVTRTLTWDGDAGDTTGTLAPLTSLFHYTRTGE-LRQVQLPDGADLTLTY 976 Query: 128 PGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILAD 187 + R + + T + SG + G ++ D + Sbjct: 977 DAAGRESHRRGGSGFVQQREYDVMGWLTREMSGAQHDGHLLAAQTREYRYDGAGNLTGVR 1036 Query: 188 RVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLA---LVS-TEGATE 243 + L + G + + H GLP L G Sbjct: 1037 HNRDAEGYRLDATGRVQAVLSGGAGKPVDTTARFHYTRT---GLPQEAGRLTEWQAGRLV 1093 Query: 244 W----CAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEESGLYYNRHRYYDPLQG-RYITQ 298 +YD G L+ ++ + ++D N+ R D G R++ + Sbjct: 1094 QHDDTHYQYDRAGRLIRKQVVQPGYRPQVWQ-YRWDS-----RNQLRVVDTPTGERWLYR 1147 Query: 299 -DPIGLKGG 306 DP G + G Sbjct: 1148 YDPFGRRVG 1156 Score = 42.9 bits (99), Expect = 0.030, Method: Composition-based stats. Identities = 50/312 (16%), Positives = 82/312 (26%), Gaps = 67/312 (21%) Query: 8 ARDAHYLYRYDRHGRLTE---------------KTDLIPEGVIRTDDERTHRYHYDSQHR 52 A RYD R+ + + +PE +IR DD+ R YD + Sbjct: 703 AESRTQQMRYDMQDRVVQWQRADGARFRLGYRRASWALPEQLIRPDDKEEQR-QYDRHNN 761 Query: 53 LVHYTRTQYA-----------------EPLVESRYLYDPLGRRVAKRVWRRERDLTGWMS 95 L+ Y A RY YD + + LT ++ Sbjct: 762 LLSYVDGNGALWRQSFGPFDLLTARTDAEGHTWRYAYD-----------KESQQLTTVIA 810 Query: 96 LSRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQPGS--------------FTPLIR----V 137 W DG + T Y F R Sbjct: 811 PDGSRWQWWLDADGRVVRERDMTGTETHYGYDEDGLCVSVRNGEGDTRHFLYDARGLLLR 870 Query: 138 ETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSEESRRWL 197 ETA + + ++ + S + + + + +L +V + +R Sbjct: 871 ETAPDDTLHYRYDAVGRLTEVSSATAHVQLDYDLRDRVVREWHNGTLLTRQVDDNART-- 928 Query: 198 ASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNE 257 T+ + D T A L+H G + +GA YD G + Sbjct: 929 --VTRTLTWDGDAGDTTGTLAPLTSLFHYTRTGELRQVQLPDGADL-TLTYDAAGRESHR 985 Query: 258 ENPHQLQQLIRL 269 Q Sbjct: 986 RGGSGFVQQREY 997 Score = 41.3 bits (95), Expect = 0.078, Method: Composition-based stats. Identities = 39/271 (14%), Positives = 75/271 (27%), Gaps = 15/271 (5%) Query: 2 WPDNRIARDAHYLYR--YDRHGRLTE--KTDLIPEGVIRTDDERTHRYHYDSQHRLVHYT 57 W D + + L +D H E + +R D T + ++ L Sbjct: 407 WRDFSVVQGERRLLSAIHDSHDNRIELVRDPKGYLRQVRHSDGVTLLLVWRGEY-LHQIQ 465 Query: 58 RTQYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQN 117 R + + + Y D GR V + + R W+ D D+ Sbjct: 466 RIDGGQKTLLAEYRQDEQGRLVEANATHAYHLYYEYDAAHRL--TRWH--DNDQTWARYE 521 Query: 118 DRTRIQTIYQPGSFTPL-IRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQM 176 T+ + +Y + L R + + T + G D + + + Sbjct: 522 YDTQGRCVYTTCADGFLTARFDYLPDRVVMTDG---LGQRSEFGFNDLHLMSWEQSPLGH 578 Query: 177 LDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALV 236 + R E + + + + E S ++ + + D + Sbjct: 579 VTRYEYDEVGNLLREISPAGRVVEFGYLDDTGRVSTFTDASGHQWRYDYDDAL-RLCGVT 637 Query: 237 STEGATEWCAEYDEWGNLLNEENPHQLQQLI 267 G W YD GN P + Sbjct: 638 DPLGRE-WRWVYDAEGNPERLTGPEASEVRF 667 >UniRef50_A0LJM9 YD repeat protein n=3 Tax=Syntrophobacter fumaroxidans MPOB RepID=A0LJM9_SYNFM Length = 1433 Score = 179 bits (454), Expect = 2e-43, Method: Composition-based stats. Identities = 79/343 (23%), Positives = 123/343 (35%), Gaps = 40/343 (11%) Query: 16 RYDRHGRLT--EKTDLIPEGVIRTDDERTHR-------------YHYDSQHRLVHYTRTQ 60 YD +GRLT + + + + H Y YD+ RL R Sbjct: 984 EYDLNGRLTTANRGAPMQRDFTYYPNGQLHTVAGTASTPWVNRVYAYDTLDRLSLAER-- 1041 Query: 61 YAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRK------PQVTWYGWDGDRLTT 114 P + Y +D G R+ V + + + + + Q + +D + T Sbjct: 1042 ---PQLTKAYDFDSAGNRLHTIVDASVSETYAYAAGTNRLSAVAAAQGKTFDYDANGNTI 1098 Query: 115 IQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLV 174 + T ++ LI V L ++ G ++ Sbjct: 1099 LIASGT--NRVFTYNQENRLIGVAEDGNPLGTYVYNGFGQRAAKTAGGVATLYIYDFSGN 1156 Query: 175 QMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARK---IHLYHCDHRGL 231 + E+E + +E G + M + ++ H D G Sbjct: 1157 LVC---EAEGTGGGIQKE----YIHHGRSRLAMADPGAGAVCSGNTKVCVYFTHNDLLGT 1209 Query: 232 PLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEESGLYYNRHRYYDPL 291 P + + W A YD +G + R PGQ YD E+GL+YN HRYYDP Sbjct: 1210 PEFMTDSTNTAVWEAAYDAFGEATIHP-ASTVVNNFRFPGQYYDAETGLHYNWHRYYDPK 1268 Query: 292 QGRYITQDPIGLKGGWNFYQYPLN-PVQYIDSMGLASKYGHLN 333 GRY+T DPIGL GG N Y Y N P+ +ID GL +++ Sbjct: 1269 TGRYMTPDPIGLAGGINPYTYAENDPINFIDLYGLWRFPDYVS 1311 Score = 54.8 bits (130), Expect = 8e-06, Method: Composition-based stats. Identities = 41/235 (17%), Positives = 67/235 (28%), Gaps = 28/235 (11%) Query: 12 HYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYL 71 H +YD G + D + Y YD+ +R++ TR A + + Sbjct: 723 HTRTQYDASGNVRSVVD---------PNGNQTDYAYDAFNRVISITRPGNA----VTHFE 769 Query: 72 YDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQPGSF 131 YD G +AK V + + T Y G+ + D Y+P Sbjct: 770 YDSQGN-LAKVV---DPEGDPANPALGHTTTTTYDDMGNLIGVGSPDSGTTTYGYRPEG- 824 Query: 132 TPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSE 191 I + T + Q+ G + V R + V++ Sbjct: 825 --TIWWRIDARNIQTTYSNDALYRINQASYPAVGDLAAYTVTYSHDQRANGKGHLTTVTD 882 Query: 192 ESRRWL---ASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATE 243 S L + G E+ +T +R G L G T Sbjct: 883 PSGTTLLNYDARGRLKEKKSTVSGFQFTLSRTFS-----PAGRVNQLTYPSGRTV 932 Score = 47.1 bits (110), Expect = 0.002, Method: Composition-based stats. Identities = 36/239 (15%), Positives = 72/239 (30%), Gaps = 24/239 (10%) Query: 36 RTDDERTHRYHYDSQ-HRLVHYTRTQYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWM 94 R+ T + YD+ + L+ TR + +D G Sbjct: 557 RSGTGDTTTFAYDATTNDLLSVTRPLVGATVFS---NFDAAGN------------PRKLT 601 Query: 95 SLSRKPQVTWYGWDGDRLTTIQN-DRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLA 153 ++ + Q Y G R+ I N + ++T+ + P R + + T + Sbjct: 602 DVNAQEQTFVYDSRG-RIKEIHNTADSSVRTVTYNVAGLPATRTDEDGVNESHTYDNTYG 660 Query: 154 DTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDP 213 ++ +G V L ++ AD ++ E R W S + + + Sbjct: 661 Q-PRRVTDHEGNYVKTIFNAAGNLTSVQHLTAADEITRE-RTWSYSGSDYPGLLFKEYEA 718 Query: 214 VYTPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQ 272 + D G ++V G YD + +++ P Q Sbjct: 719 DGVTHTRTQY---DASGNVRSVVDPNGNQT-DYAYDAFNRVISITRPGNAVTHFEYDSQ 773 Score = 44.0 bits (102), Expect = 0.011, Method: Composition-based stats. Identities = 33/248 (13%), Positives = 63/248 (25%), Gaps = 17/248 (6%) Query: 22 RLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYLYDPLGRRVAK 81 R EK E Y++ +++ + + + YD Sbjct: 519 RKIEKGYRKTVAGTVASYEYVTALTYNAGGQVLTIDGPRSGTGD-TTTFAYDA------- 570 Query: 82 RVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETAT 141 L+ L + + G+ + +Y S + + Sbjct: 571 ---TTNDLLSVTRPLVGATVFSNFDAAGNPRKLTDVNAQEQTFVYD--SRGRIKEIHNTA 625 Query: 142 GELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSEESRRWLASCG 201 +T ++A EDG + R + D + + G Sbjct: 626 DSSVRTVTYNVAGLPATRTDEDGVNESHTYDNTYGQPRRVT----DHEGNYVKTIFNAAG 681 Query: 202 LTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPH 261 T R D+ GL +G T +YD GN+ + +P+ Sbjct: 682 NLTSVQHLTAADEITRERTWSYSGSDYPGLLFKEYEADGVTHTRTQYDASGNVRSVVDPN 741 Query: 262 QLQQLIRL 269 Q Sbjct: 742 GNQTDYAY 749 >UniRef50_C6WJA6 YD repeat protein n=3 Tax=Actinosynnema mirum DSM 43827 RepID=C6WJA6_ACTMD Length = 1509 Score = 179 bits (453), Expect = 3e-43, Method: Composition-based stats. Identities = 79/336 (23%), Positives = 116/336 (34%), Gaps = 27/336 (8%) Query: 6 RIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPL 65 R AR YRY G L DL+ RY D R+ + ++E Sbjct: 1066 RGARVQRRDYRYRADGNLLAVDDLLAGP---------RRYELDPAGRVTSVLGSGWSEG- 1115 Query: 66 VESRYLYDPLGRRV---AKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQND--RT 120 Y YD G R G + + G + Sbjct: 1116 ----YAYDRAGELTWATGPGETSGARSYAGTLIRRAGDVHFEHDAQGRVVVRAHRTLSGR 1171 Query: 121 RIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRL 180 Y + ++ T G + L + + + GG+VV V L Sbjct: 1172 ERTWRYGWDAEDRMVSATTPDGARWAYRYDGLGRRVAKERLDAGGAVVERVDFVWDGLVL 1231 Query: 181 ESEILADRVSEESRRWLASCGLTVEQMQNQ---MDPVYTPARKIHLYHCDHRGLPLALVS 237 +I A + W G Q + P + H D G+P L+ Sbjct: 1232 VEQITAG----TALTWDYEPGSHRPLTQVERVLAAPQEWVDARFHAVVSDVVGMPSELLD 1287 Query: 238 TEGATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEESGLYYNRHRYYDPLQGRYIT 297 GA W ++ WG +L E +R GQ +D E+GL+YN HRYYDP RY + Sbjct: 1288 DAGALVWRSQRTLWGAVLAELAGGP-DCPLRFAGQYHDRETGLFYNVHRYYDPETARYSS 1346 Query: 298 QDPIGLKGGWNFYQYPLNPVQYIDSMGLASKYGHLN 333 DP+GL G N + Y +NP++ D +GL+ Sbjct: 1347 PDPLGLLAGPNPHAYVVNPLRLTDPLGLSGCERARK 1382 Score = 105 bits (261), Expect = 4e-21, Method: Composition-based stats. Identities = 54/254 (21%), Positives = 78/254 (30%), Gaps = 34/254 (13%) Query: 2 WPDNRIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQY 61 + I R + +D GR+ + G R T RY +D++ R+V T Sbjct: 1139 YAGTLIRRAGDVHFEHDAQGRVVVRAHRTLSGRER-----TWRYGWDAEDRMVSATTPDG 1193 Query: 62 AEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTR 121 A Y YD LGRRVAK + + + WDG L T Sbjct: 1194 A----RWAYRYDGLGRRVAKERLDAGGAVV---------ERVDFVWDGLVLVEQITAGTA 1240 Query: 122 IQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDR-L 180 + Y+PGS PL +VE + + G + LV R L Sbjct: 1241 LTWDYEPGSHRPLTQVERVLAAPQEWVDARFHAVVSDVVGMPSELLDDAGALVWRSQRTL 1300 Query: 181 ESEILADRVS--EESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRG-------- 230 +LA+ + R+ + + Y P D G Sbjct: 1301 WGAVLAELAGGPDCPLRFAGQYHDRETGLFYNVHRYYDP-ETARYSSPDPLGLLAGPNPH 1359 Query: 231 ----LPLALVSTEG 240 PL L G Sbjct: 1360 AYVVNPLRLTDPLG 1373 Score = 61.7 bits (148), Expect = 6e-08, Method: Composition-based stats. Identities = 50/279 (17%), Positives = 78/279 (27%), Gaps = 43/279 (15%) Query: 13 YLYRYDRHGRLTEKTDLIPEGVI--RTDDERT----------HRYHYDSQHRLVHYTRTQ 60 Y YD RLTE + + DD+R +RY YD + R V + Sbjct: 549 IRYGYDAERRLTEVVNSSGAALRFSYDDDQRVVGWQDRNGMWYRYGYDDRGRCVL---NE 605 Query: 61 YAEPLVESRYLY--------DPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWD-GDR 111 A+ + + Y D LG R + R + V WD DR Sbjct: 606 GADDYLSGTFAYLDGRTVYTDALGNRTE---FHLNRAHQVVREVDAGGGVVVSEWDRHDR 662 Query: 112 LTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPP 171 L + + R T + V E T + + + P Sbjct: 663 LLSRTDQLGRTTTHRYDEDGNLVALVRPDGRESTATYDAGRMPLVVEDVDGAVWRREYDP 722 Query: 172 VLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGL 231 + S +E +A G P ++ D GL Sbjct: 723 RGNLLAVTDPSGARTRFDRDERGNAVAITG---------------PLGEVRRIDYDLAGL 767 Query: 232 PLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRLP 270 P+A+ EG D +G + +P + Sbjct: 768 PVAITDAEGGRT-GYRRDRFGRVREVTDPLGSTTTLGWT 805 Score = 53.3 bits (126), Expect = 2e-05, Method: Composition-based stats. Identities = 45/291 (15%), Positives = 78/291 (26%), Gaps = 36/291 (12%) Query: 9 RDAHYLYRYDRHGRLTEKTDLIPEGVIRTD------------DERTHRYHYDSQHRLVHY 56 A + YD + RLT + + D R+ Y +D+ +L Sbjct: 859 DGARLEFGYDPNLRLTSVVNARGQAWTYRYGPTGALVVETDFDGRSTTYVHDATGQLTA- 917 Query: 57 TRTQYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTT-- 114 + Y +D LGR AKR + + V+ D D L Sbjct: 918 ---KVNGAGERIAYEHDELGRLRAKRTPHGDTTYDHDPAGRLIRAVSR---DADVLVERD 971 Query: 115 -----IQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVF 169 + + + +R T TG +++ + G + + Sbjct: 972 LLGRIVAETVNGRTLRSEHDASGNRVRRVTPTGAVSEWEHDGTGRATALLAGGRRTAFGY 1031 Query: 170 PPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHR 229 ++ + +V + + R LA + D Y + L D Sbjct: 1032 DAAGREVQRLVGDSTRLGQVWDANHRLLAQDLTARGARVQRRDYRYRADGNL-LAVDDLL 1090 Query: 230 GLPLA-LVSTEGATE------WC--AEYDEWGNLLNEENPHQLQQLIRLPG 271 P + G W YD G L P + G Sbjct: 1091 AGPRRYELDPAGRVTSVLGSGWSEGYAYDRAGELTWATGPGETSGARSYAG 1141 Score = 51.0 bits (120), Expect = 1e-04, Method: Composition-based stats. Identities = 42/280 (15%), Positives = 78/280 (27%), Gaps = 34/280 (12%) Query: 8 ARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVE 67 Y +D GRL + ++ D R+V T Sbjct: 941 TPHGDTTYDHDPAGRLIRAVSRDADVLVER----------DLLGRIVAETV-----NGRT 985 Query: 68 SRYLYDPLGRRVAKRVWRRERDLTGWMSLSRK------PQVTWYGWD--GDRLTTIQNDR 119 R +D G RV + R + T +G+D G + + D Sbjct: 986 LRSEHDASGNRVRRVTPTGAVSEWEHDGTGRATALLAGGRRTAFGYDAAGREVQRLVGDS 1045 Query: 120 TRIQTIYQPGSFTPLIRVETATGELA--KTQRRSLADTLQQSGGEDGGSVVFPPVLVQML 177 TR+ ++ L + TA G + R L G + + Sbjct: 1046 TRLGQVWDAN-HRLLAQDLTARGARVQRRDYRYRADGNLLAVDDLLAGPRRYELDPAGRV 1104 Query: 178 DRLESEILADRVSEESR---RWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLA 234 + ++ + + W G T ++ + A +H H D +G + Sbjct: 1105 TSVLGSGWSEGYAYDRAGELTWATGPGET-SGARSYAGTLIRRAGDVHFEH-DAQGRVVV 1162 Query: 235 ---LVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRLPG 271 + W +D +++ P + R G Sbjct: 1163 RAHRTLSGRERTWRYGWDAEDRMVSATTPDGARWAYRYDG 1202 Score = 51.0 bits (120), Expect = 1e-04, Method: Composition-based stats. Identities = 49/264 (18%), Positives = 76/264 (28%), Gaps = 42/264 (15%) Query: 8 ARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVE 67 A YR DR GR+ E TD + T + + RL T + Sbjct: 774 AEGGRTGYRRDRFGRVREVTDPL---------GSTTTLGWTVEGRLASRTLPDGS----V 820 Query: 68 SRYLYDPLGRRVAKRVWRRERDLTGWMS-------LSRKPQVTWYGWDGD-RLTTIQND- 118 R+ YD G V TG+ + +G+D + RLT++ N Sbjct: 821 ERWRYDGEGNPVEHVDAAGAVSRTGYTGFDQPAWHVGPDGARLEFGYDPNLRLTSVVNAR 880 Query: 119 RTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLD 178 Y P T + VET + T L G + + Sbjct: 881 GQAWTYRYGP---TGALVVETDFDGRSTTYVHDATGQLTAKVNGAGERIAYE-------H 930 Query: 179 RLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVST 238 + A R + + + ++ V D G +A Sbjct: 931 DELGRLRAKRTPHGDTTYDHDPAGRLIRAVSRDADVLVER--------DLLGRIVAET-V 981 Query: 239 EGATEWCAEYDEWGNLLNEENPHQ 262 G T +E+D GN + P Sbjct: 982 NGRTL-RSEHDASGNRVRRVTPTG 1004 >UniRef50_B4V251 LipX3 n=2 Tax=Streptomyces RepID=B4V251_9ACTO Length = 1253 Score = 178 bits (452), Expect = 3e-43, Method: Composition-based stats. Identities = 72/337 (21%), Positives = 110/337 (32%), Gaps = 42/337 (12%) Query: 6 RIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPL 65 R + D+ GR+T T Y YDS L + + P Sbjct: 838 RELSSGTRRFELDQVGRVTSV----------RAHGWTESYAYDSAGNLTSASAPAHETPG 887 Query: 66 ------------VESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDG-DRL 112 + Y +D GR + K L+ + V Y W+ DRL Sbjct: 888 DREFTGTLIRSAGRTAYEHDAQGRLIRKTRK----------LLNGQRLVWTYAWNAEDRL 937 Query: 113 TTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPV 172 T Y ++ PL R + + T P Sbjct: 938 TEAVTPEGA-HWHY---AYDPLGR--RISKHRLAADGSVVDRTEFSWDDVRLAERRSPDG 991 Query: 173 LVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLP 232 V D ++ + + Y+ + + D G P Sbjct: 992 QVTTWDYAPGTHRPLTQTDHKPLVREQGTSLLANLAQDTTTDYST--RFYAVVTDALGTP 1049 Query: 233 LALVSTEGATEWCAEYDEWGNLLNE-ENPHQLQQLIRLPGQQYDEESGLYYNRHRYYDPL 291 LV++ G W WG + IR PGQ D E+GL+YN RYY+P Sbjct: 1050 TELVASGGELAWQRRTTLWGTDFPAPTDTTSADCPIRFPGQYADSETGLHYNFFRYYEPE 1109 Query: 292 QGRYITQDPIGLKGGWNFYQYPLNPVQYIDSMGLASK 328 RYI+ DP+GL+ N + Y +N + + D +GLA++ Sbjct: 1110 SARYISADPLGLEPAPNHHAYVVNALGWTDPLGLAAR 1146 Score = 68.7 bits (166), Expect = 5e-10, Method: Composition-based stats. Identities = 48/277 (17%), Positives = 82/277 (29%), Gaps = 38/277 (13%) Query: 14 LYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYLYD 73 Y YD G LTE + E + R+ YD++ R+ +T Y YD Sbjct: 293 RYGYDEVGNLTEVVNSSGEPL---------RFTYDAKGRVTSWTDRND----TTFAYFYD 339 Query: 74 PLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYG-WDGDRLTTIQNDRTRIQTIYQPGSFT 132 GR +R + L+G ++ + + T Y G R T N + P T Sbjct: 340 TRGRV--ERTEGSDGFLSGTLAYDDQARTTTYTDSLGRRSTHQYNSGGMVVEETDPLGHT 397 Query: 133 PLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRV--- 189 +R + + ++ + + Q + R L Sbjct: 398 --VRTQWTARGDRPVSVTDPLGRTTRYTYDEAEHLTAVTLPDQSIARAAYNTLGQPTEVI 455 Query: 190 ----SEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLY-HCDHR-----------GLPL 233 + + + + YT HL D GLP+ Sbjct: 456 EPGGATWRHTYDERGNVLTTTDPLGAETRYTYDESGHLVTVTDALGHSRRVTSNAAGLPV 515 Query: 234 ALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRLP 270 A+ G T A D +G ++ +P + Sbjct: 516 AVTDELGHTTA-ARRDAFGRVVEMTDPLGQTTRMGWT 551 Score = 59.8 bits (143), Expect = 2e-07, Method: Composition-based stats. Identities = 51/286 (17%), Positives = 79/286 (27%), Gaps = 49/286 (17%) Query: 13 YLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYLY 72 + Y YD GRL +TD + RT Y +D+ L T R+ Sbjct: 630 WSYAYDEAGRLVTETDF---------NGRTLAYTHDASDGLTSRTNGAGE----TLRFTR 676 Query: 73 DPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWD--------GDRLTTIQNDRTRIQT 124 D LGR + +R + + + + G LT N RT Sbjct: 677 DALGRVIEQRTDTGDTTTYAYGASGDLTHTANADAEVAIERDALGRTLTETVNGRTTTY- 735 Query: 125 IYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEI 184 ++ PL RV T S + +G + E E Sbjct: 736 -----AYDPLGRVVRRTTPSGLNSTWSYDAAGRPAGLGADAGSL---AFAYDASGREIER 787 Query: 185 LADRVSEESRRWLASCGLTVEQMQNQMDPVYTPAR-KIHLYHCDH---------RGLPLA 234 + ++ W LT + + + + + + Y D G Sbjct: 788 HLGDGARLTQSWDIDHRLTEQTLSGRSSGSDRLLQHRTYAYREDGYLTEIRELSSGTRRF 847 Query: 235 LVSTEGATE------W--CAEYDEWGNLLNEENPHQLQQLIR-LPG 271 + G W YD GNL + P R G Sbjct: 848 ELDQVGRVTSVRAHGWTESYAYDSAGNLTSASAPAHETPGDREFTG 893 Score = 56.7 bits (135), Expect = 2e-06, Method: Composition-based stats. Identities = 37/193 (19%), Positives = 62/193 (32%), Gaps = 14/193 (7%) Query: 18 DRHGRLTEKTDL-IPEGVIRTD-DERTHRYHYDSQHRLVHYTRTQYAEPLVESRYLYDPL 75 D G T T RTD D T+ + YD++ RL T Q + Y YD Sbjct: 582 DPAGNTTRHTATHFGVPATRTDPDGTTYAFAYDTELRLTGVTNPQG----LIWSYAYDEA 637 Query: 76 GRRVAKRVWRRERDLTGWMS-------LSRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQP 128 GR V + + + + + + D Q T T Y Sbjct: 638 GRLVTETDFNGRTLAYTHDASDGLTSRTNGAGETLRFTRDALGRVIEQRTDTGDTTTYAY 697 Query: 129 GSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADR 188 G+ L A E+ +R +L TL ++ + + P+ + S + + Sbjct: 698 GASGDLTHTANADAEV-AIERDALGRTLTETVNGRTTTYAYDPLGRVVRRTTPSGLNSTW 756 Query: 189 VSEESRRWLASCG 201 + + R Sbjct: 757 SYDAAGRPAGLGA 769 Score = 52.9 bits (125), Expect = 3e-05, Method: Composition-based stats. Identities = 51/289 (17%), Positives = 79/289 (27%), Gaps = 46/289 (15%) Query: 11 AHYLYRYDRHGRLTEKTDLIPEGVIRTDD------------ERTHRYHYDSQHRLVHYT- 57 A Y YD G L TD + T + T D+ R+V T Sbjct: 481 AETRYTYDESGHLVTVTDALGHSRRVTSNAAGLPVAVTDELGHTTAARRDAFGRVVEMTD 540 Query: 58 ---------RTQYAEPLVESR-------YLYDPLGRRVAKR-----VWRRERDLTGWMSL 96 T +P + + +D G + R G + Sbjct: 541 PLGQTTRMGWTTEGKPTWRTHADGRRESWTWDGEGNPLTHTDPAGNTTRHTATHFGVPAT 600 Query: 97 SRKPQVTWYGWDGD---RLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLA 153 P T Y + D RLT + N + I Y L+ ET + Sbjct: 601 RTDPDGTTYAFAYDTELRLTGVTNPQGLI-WSYAYDEAGRLV-TETDFNGRTLAYTHDAS 658 Query: 154 DTLQQSGGEDGGSVVFP-----PVLVQMLDRLESEILADRV-SEESRRWLASCGLTVEQM 207 D L G ++ F V+ Q D ++ A + + A + +E+ Sbjct: 659 DGLTSRTNGAGETLRFTRDALGRVIEQRTDTGDTTTYAYGASGDLTHTANADAEVAIERD 718 Query: 208 QNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLN 256 T + Y D G + + G YD G Sbjct: 719 ALGRTLTETVNGRTTTYAYDPLGRVVRRTTPSG-LNSTWSYDAAGRPAG 766 Score = 51.0 bits (120), Expect = 1e-04, Method: Composition-based stats. Identities = 62/325 (19%), Positives = 87/325 (26%), Gaps = 72/325 (22%) Query: 2 WPDNRIARDAHYLYRYDRHGR--LTEKTDLIPEGVIRTDDE-RTHRYHYDSQHR------ 52 W D D + Y YD GR TE +D G + DD+ RT Y DS R Sbjct: 326 WTD---RNDTTFAYFYDTRGRVERTEGSDGFLSGTLAYDDQARTTTYT-DSLGRRSTHQY 381 Query: 53 ------------LVHYTRTQYAEPL-----------VESRYLYDPLGRR---------VA 80 L H RTQ+ +RY YD +A Sbjct: 382 NSGGMVVEETDPLGHTVRTQWTARGDRPVSVTDPLGRTTRYTYDEAEHLTAVTLPDQSIA 441 Query: 81 KRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQP--------GSFT 132 + + T + Y G+ LTT + Y + Sbjct: 442 RAAYNTLGQPTEVIEPGGATWRHTYDERGNVLTTTDPLGAETRYTYDESGHLVTVTDALG 501 Query: 133 PLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQ---MLDRLESEILADRV 189 RV + L L T G V L Q M E + Sbjct: 502 HSRRVTSNAAGLPVAVTDELGHTTAARRDAFGRVVEMTDPLGQTTRMGWTTEGKPTWRTH 561 Query: 190 SE---ESRRWLASCGLTVEQMQNQMDPVYT------------PARKIHLYHCDHRGLPLA 234 ++ ES W +T P + + D Sbjct: 562 ADGRRESWTWDGEGNPLTHTDPAGNTTRHTATHFGVPATRTDPDGTTYAFAYDTELRLTG 621 Query: 235 LVSTEGATEWCAEYDEWGNLLNEEN 259 + + +G W YDE G L+ E + Sbjct: 622 VTNPQG-LIWSYAYDEAGRLVTETD 645 Score = 49.0 bits (115), Expect = 4e-04, Method: Composition-based stats. Identities = 49/302 (16%), Positives = 77/302 (25%), Gaps = 67/302 (22%) Query: 11 AHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVH---------YTRTQY 61 + D GR+ E+ RTD T Y Y + L H R Sbjct: 670 ETLRFTRDALGRVIEQ---------RTDTGDTTTYAYGASGDLTHTANADAEVAIERDAL 720 Query: 62 AEPLVES------RYLYDPLGRRVAKRVWRRERDLTGWMSLSR----------------- 98 L E+ Y YDPLGR V + + + R Sbjct: 721 GRTLTETVNGRTTTYAYDPLGRVVRRTTPSGLNSTWSYDAAGRPAGLGADAGSLAFAYDA 780 Query: 99 -KPQVTWYGWDGDRLTT-----------------IQNDRTRIQTIYQPGSFTPLIRVETA 140 ++ + DG RLT +DR Y L + Sbjct: 781 SGREIERHLGDGARLTQSWDIDHRLTEQTLSGRSSGSDRLLQHRTYAYREDGYLTEIREL 840 Query: 141 TGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSEESRRWLASC 200 + + + + S + + E + + S Sbjct: 841 SSGTRRFELDQVGRVTSVRAHGWTESYAYDSAGNLTSASAPAHETPGD-REFTGTLIRSA 899 Query: 201 GLTVEQMQNQMDPVYTPA------RKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNL 254 G T + Q + R + Y + V+ EGA W YD G Sbjct: 900 GRTAYEHDAQGRLIRKTRKLLNGQRLVWTYAWNAEDRLTEAVTPEGA-HWHYAYDPLGRR 958 Query: 255 LN 256 ++ Sbjct: 959 IS 960 >UniRef50_D1AA66 YD repeat-containing protein n=1 Tax=Thermomonospora curvata DSM 43183 RepID=D1AA66_THECD Length = 1197 Score = 178 bits (451), Expect = 4e-43, Method: Composition-based stats. Identities = 88/384 (22%), Positives = 128/384 (33%), Gaps = 78/384 (20%) Query: 10 DAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEP----- 64 H + D GR+T RY YDS ++H +P Sbjct: 814 SGHRAFELDAVGRITAV----------QGQGGNERYTYDSAGNIIHALWPTDGDPSALSA 863 Query: 65 ---------------LVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDG 109 Y YD GR V +R R LS KP + + W+ Sbjct: 864 DAAGERSYTGVRIRRAGRIHYEYDAQGRVVLRRHAR----------LSSKPLIWRFYWNA 913 Query: 110 -DRLTTIQNDRTRI-QTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSV 167 DRLT++Q + +Y P RR L G + Sbjct: 914 EDRLTSVQTPDGHWWRYLYDP------------------LGRRIAKQHLAPDGKTLLEQI 955 Query: 168 VFPPVLVQMLDRL-ESEILADRVSEESRRWLASCGLTV-----EQMQNQMDPVYTPARKI 221 F + +++ + ++ W G E + + R+ Sbjct: 956 DFIWEGPSIAEQIHYAWSAGQLSADHVTTWDYEPGTFQPLTQSEHITSGASQHGRAVRRF 1015 Query: 222 HLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEESGLY 281 H D G P+ LV+ +G+ W + WG Q+ + PGQ YD E+GLY Sbjct: 1016 HAIIADLVGTPVELVAPDGSISWRSHAAVWGAP-YVSRADQISCPLGFPGQYYDSETGLY 1074 Query: 282 YNRHRYYDPLQGRYITQDPIGLKGGWNFYQYPLNPVQYIDSMGLASKYGHLNNGGYGARP 341 +N RYY P GRY++ DP+GL N Y Y +NP + D GL Y R Sbjct: 1075 FNYFRYYSPFDGRYLSPDPLGLSPQPNPYIYVINPFVWADPFGL-----------YPHRQ 1123 Query: 342 NKPPTPDPSKLPDIAKQLRLPYPI 365 K P +L R+ P Sbjct: 1124 GKEPRYGSHELSRKVIDYRVENPN 1147 Score = 69.4 bits (168), Expect = 3e-10, Method: Composition-based stats. Identities = 51/293 (17%), Positives = 80/293 (27%), Gaps = 57/293 (19%) Query: 6 RIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPL 65 R+ A + YD LTE + R+ YD RL +T T Sbjct: 258 RMGETALKTFDYDEAANLTE---------VAGPTGAPTRFDYDEAGRLTRWTDTNGNW-- 306 Query: 66 VESRYLYDPLGRRVA---------------------------KRVWRRERDLTGWMSLSR 98 Y YD GR + + V+ + Sbjct: 307 --YAYTYDERGRAIRGTGSGGYLNVALEYHDDRTVLTDSLGHRTVYHFNERRQLVAETNP 364 Query: 99 KPQVTWYGW-DGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQ 157 VT Y W D DRL T+ + R Y F+ + + G + Q Sbjct: 365 LGAVTRYEWDDNDRLLTVTDPLGR-TVRYTYDEFSNITSITRPDGAVTTITYNDQCRPTQ 423 Query: 158 QSGGEDGGSVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTP 217 + +L + + R + + R L S V P Sbjct: 424 IVEFDGAIWNSTYDERGNLLTQTDPTGAVIRCTYDERGALTS--------------VTDP 469 Query: 218 ARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRLP 270 A C+ GLP+A+ ++ G Y+ G + +P Sbjct: 470 AGGTTRIECNPAGLPIAVTNSRGGVT-RYRYNPLGRITELVDPIGGVSTFTWT 521 Score = 60.6 bits (145), Expect = 1e-07, Method: Composition-based stats. Identities = 50/268 (18%), Positives = 82/268 (30%), Gaps = 42/268 (15%) Query: 13 YLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVE----- 67 + Y YD G L +TD + R Y YD+ +L YT Sbjct: 600 WRYAYDVAGNLISETDF---------NGRVVHYAYDAAGQLTTYTNGAGQVTAFTRDVLG 650 Query: 68 -----------SRYLYDPLGRRVA----KRVWRRERDLTGWMS---LSRKPQVTWYGWDG 109 + + YD GR V R ERDL G ++ + + Y G Sbjct: 651 AIVRKDAGGEITTFTYDRAGRLVRAVNTHADLRLERDLLGRVTAEICNGRVLRWTYDEVG 710 Query: 110 DRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVF 169 +R+ Y P L T G++ + + +++ G+ V Sbjct: 711 NRVRRRTPSGAESVWTYDPAG---LPLSLTTAGQVITFEHDAAGREVRR----RIGTGVI 763 Query: 170 PPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIH-LYHCDH 228 + RL S+ L + + + T + T H + D Sbjct: 764 LDQQWDAVHRLTSQALWGAPASPTAQPRLLQHRTYSYRPDDYPIAITDRLSGHRAFELDA 823 Query: 229 RGLPLALVSTEGATEWCAEYDEWGNLLN 256 G A+ G YD GN+++ Sbjct: 824 VGRITAVQGQGGNE--RYTYDSAGNIIH 849 Score = 49.8 bits (117), Expect = 2e-04, Method: Composition-based stats. Identities = 59/298 (19%), Positives = 94/298 (31%), Gaps = 48/298 (16%) Query: 9 RDAHYLYRYDRHGRLTEKTDLIPE------------GVIRTDDERTHRYHYDSQHRLVHY 56 R YRY+ GR+TE D I T D + + YD + LV Y Sbjct: 491 RGGVTRYRYNPLGRITELVDPIGGVSTFTWTPDGRLTSRTTPDGASEHWSYDHEGNLVEY 550 Query: 57 TRTQYAEPLVESRYLYD-------PLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDG 109 TR E +D P G R+ + + +L + + V Y +D Sbjct: 551 TRPTGQTTRWEIG-PFDQPIAWIGPDGGRLE---FAYDTELRLTSVTNPQGLVWRYAYDV 606 Query: 110 DRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGG-------E 162 + D Y + L G++ R L +++ G Sbjct: 607 AGNLISETDFNGRVVHYAYDAAGQLTTYTNGAGQVTAFTRDVLGAIVRKDAGGEITTFTY 666 Query: 163 DGGSVVFPPVLVQMLDRLESEILADRVSE----ESRRWLASCGLTVEQMQNQMDPVYTPA 218 D + V RLE ++L +E RW + + TP+ Sbjct: 667 DRAGRLVRAVNTHADLRLERDLLGRVTAEICNGRVLRWTYDEVGNRVRRR-------TPS 719 Query: 219 RKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQYDE 276 ++ D GLPL+L + G E+D G + + QQ+D Sbjct: 720 GAESVWTYDPAGLPLSLTTA-GQVI-TFEHDAAGREVRRRIGTGVILD-----QQWDA 770 >UniRef50_A1TQS0 YD repeat protein n=2 Tax=Acidovorax RepID=A1TQS0_ACIAC Length = 1602 Score = 178 bits (450), Expect = 5e-43, Method: Composition-based stats. Identities = 84/368 (22%), Positives = 127/368 (34%), Gaps = 73/368 (19%) Query: 12 HYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYL 71 Y YD G+L + D + + YD R++ L + Sbjct: 1121 ERAYAYDATGQLVARADTL---------RGRQDFRYDPTGRILAAL-PALGSALARELFA 1170 Query: 72 YDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQ-PGS 130 +DP G + + +R G + V +RL + Y G+ Sbjct: 1171 FDPAGNLLDASEAQMQRQQAGQATPQGLGVV-----GDNRL----RFYQDLHFEYDIHGN 1221 Query: 131 FTPLIRVETATGELAKTQ-RRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRV 189 T R G + R + L +S G L R ++ +DR Sbjct: 1222 VTKRTRGNRKAGHHETIELRWNADHQLVESTTTRHGVTQATRYAYDALGRRVAK--SDRF 1279 Query: 190 SEESRRWLASCGLTVEQMQNQMDPVYTPA--------------RKIHLYHCDHRGLPLAL 235 W + ++ + +Y P + + HCD G PL L Sbjct: 1280 GTTHYLWDGDLMVHSQRGRRGSLFIYEPDSFVPLATVQGTGEEQHTYWSHCDQIGAPLEL 1339 Query: 236 VSTEGATEWCAEYDEWGN------------------------------------LLNEEN 259 G W +Y WG ++ Sbjct: 1340 TDVNGQIAWAVDYKVWGEATLRAVPRSDTGTDGVPGPRRQGHGPEAKSHAADSEVVCARE 1399 Query: 260 PHQLQQLIRLPGQQYDEESGLYYNRHRYYDPLQGRYITQDPIGLKGGWNFYQYPLNPVQY 319 P +++Q R GQQ+DEE+GL+YNR RYYDP GR+I++DPIG GG N + YPL+P + Sbjct: 1400 PQRVEQPFRFQGQQFDEETGLHYNRSRYYDPAVGRFISEDPIGFLGGINTFIYPLDPYSW 1459 Query: 320 IDSMGLAS 327 ID GLA Sbjct: 1460 IDPTGLAG 1467 Score = 66.7 bits (161), Expect = 2e-09, Method: Composition-based stats. Identities = 58/268 (21%), Positives = 82/268 (30%), Gaps = 40/268 (14%) Query: 11 AHYLYRYDRHGRLTEKTDLIPEGVIRTDD------------ERTHRYHYDSQHRLVHYTR 58 Y YD HGR E TD D RT R+ Y +++ T Sbjct: 729 QATSYAYDAHGRPVEITDARGGTRRLAWDEASNLVATTDCSGRTTRFAYGPMGQILERTD 788 Query: 59 TQYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGD-RLTTIQN 117 +RY YD GR V + P V Y W+G+ +L + Sbjct: 789 ALGH----TTRYAYDGTGRLVR----------VEEPGTNGAPAVHQYAWNGEGQLLAYSD 834 Query: 118 DRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQML 177 + G+ PL R + A LA A L E+ F L Sbjct: 835 PLGQTTRYTYDGAGRPLTRQDAAGRILA--YHYDAAGRLVSLVNENRAQTTFRYDLR--- 889 Query: 178 DRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVS 237 D+L EI D +R++ + + + P K+ + D G LA Sbjct: 890 DQLTDEIGFDG---RWQRYVYNAAGELTHVIEAGGCEAGPG-KVTRFERDALGRLLAK-R 944 Query: 238 TEGATE---WCAEYDEWGNLLNEENPHQ 262 + G YD G L N Sbjct: 945 SHGHCTVEESSYRYDALGRLTQANNGAA 972 Score = 65.6 bits (158), Expect = 4e-09, Method: Composition-based stats. Identities = 71/361 (19%), Positives = 112/361 (31%), Gaps = 59/361 (16%) Query: 16 RYDR-HGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESR----- 69 +D G + +L+ G T+ RY YD+ +LV R Sbjct: 506 AHDALQGERIARVELLVPGHAPTE---LARYDYDAHGQLVATHHGAAPYRQYAWRSGVLV 562 Query: 70 -YL----------YD---PLGRRVAKRVWRRERDLTGWMSLSRKP------------QVT 103 Y YD P GR + + P +VT Sbjct: 563 GYRKASGHRYFAQYDNEGPEGRVLRSWCADAPVPGQDDDRFAYFPAERITRHIDGLGRVT 622 Query: 104 WYGWDG--DRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGG 161 Y WD + + T+ + T + TP T G + RR+ T + Sbjct: 623 AYHWDARFNIVATVTAEGTPEAVRVE----TPFDATGTPRGSVDALGRRTSLRTDARGNV 678 Query: 162 EDGGSVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKI 221 + +Q + +L D + RR + G V +DP+ Sbjct: 679 VQVIDALGQSTQLQYDQQDLVTVLRDAMGHAWRREYDARGHLV----RSIDPLEQATS-- 732 Query: 222 HLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRL--PGQQYDEESG 279 Y D G P+ + G T +DE NL+ + GQ E + Sbjct: 733 --YAYDAHGRPVEITDARGGTR-RLAWDEASNLVATTDCSGRTTRFAYGPMGQIL-ERTD 788 Query: 280 LYYNRHRY-YDPLQGRYITQDPIGLKGGWNFYQYPLNP----VQYIDSMGLASKYGHLNN 334 + RY YD GR + + G G +QY N + Y D +G ++Y + Sbjct: 789 ALGHTTRYAYD-GTGRLVRVEEPGTNGAPAVHQYAWNGEGQLLAYSDPLGQTTRYTYDGA 847 Query: 335 G 335 G Sbjct: 848 G 848 Score = 62.1 bits (149), Expect = 4e-08, Method: Composition-based stats. Identities = 54/284 (19%), Positives = 79/284 (27%), Gaps = 65/284 (22%) Query: 18 DRHGRLTEKTDLIPE------------GVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPL 65 D G + + D + + V+R R YD++ LV Sbjct: 673 DARGNVVQVIDALGQSTQLQYDQQDLVTVLRDAMGHAWRREYDARGHLVRSIDPL----E 728 Query: 66 VESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTI 125 + Y YD GR V + WD D + T Sbjct: 729 QATSYAYDAHGRPVE--------------ITDARGGTRRLAWDEASNLVATTDCSGRTTR 774 Query: 126 YQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEIL 185 + G P+ ++ T L T R + T + E+ G+ P V Sbjct: 775 FAYG---PMGQILERTDALGHTTRYAYDGTGRLVRVEEPGTNGAPAV------------- 818 Query: 186 ADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWC 245 W Q+ DP+ R + D G PL G Sbjct: 819 ------HQYAWNGEG-----QLLAYSDPLGQTTRYTY----DGAGRPLTRQDAAGRILA- 862 Query: 246 AEYDEWGNLLNEENPHQLQQLIRL--PGQQYDEESGLYYNRHRY 287 YD G L++ N ++ Q R Q D E G RY Sbjct: 863 YHYDAAGRLVSLVNENRAQTTFRYDLRDQLTD-EIGFDGRWQRY 905 Score = 58.7 bits (140), Expect = 5e-07, Method: Composition-based stats. Identities = 47/248 (18%), Positives = 75/248 (30%), Gaps = 32/248 (12%) Query: 12 HYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYL 71 + Y G++ E+TD + T RY YD RLV +Y Sbjct: 772 TTRFAYGPMGQILERTDAL---------GHTTRYAYDGTGRLVRVEEPGTNGAPAVHQYA 822 Query: 72 YDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQPGSF 131 ++ G+ +A Q T Y +DG + D Y + Sbjct: 823 WNGEGQLLA--------------YSDPLGQTTRYTYDGAGRPLTRQDAAGRILAYHYDAA 868 Query: 132 TPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPP-VLVQMLDRLESEILADRVS 190 L+ + T R L D L G DG + ++ +E+ Sbjct: 869 GRLVSLVNENRA-QTTFRYDLRDQLTDEIGFDGRWQRYVYNAAGELTHVIEAGGCEAGPG 927 Query: 191 EESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDE 250 + +R + G + + + V + Y D G GA YD Sbjct: 928 KVTRFERDALGRLLAKRSHGHCTVEESS-----YRYDALGRLTQA--NNGAAHLAFAYDP 980 Query: 251 WGNLLNEE 258 G LL+E Sbjct: 981 VGQLLSET 988 Score = 42.5 bits (98), Expect = 0.035, Method: Composition-based stats. Identities = 41/254 (16%), Positives = 63/254 (24%), Gaps = 50/254 (19%) Query: 11 AHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLV---- 66 YRYD GRLT+ + + YD +L+ T+T + Sbjct: 952 EESSYRYDALGRLTQANNGAAHLA----------FAYDPVGQLLSETQTLIGQGGAGMGR 1001 Query: 67 -------------ESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLT 113 + YDPLG R+ + R L S D+ Sbjct: 1002 DRPGHPASDDLVRTLSHAYDPLGNRI-RTCLPDGRTLNWLFYGSGHLHQINIAPVDDQDA 1060 Query: 114 TIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGE-DGGSVVFPPV 172 +++ E + G A L + G V Sbjct: 1061 HEVITDIERDALHR--------ETERSQGAATSHYGWDPAGRLVRHRASLRGSGNVATAA 1112 Query: 173 LVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLP 232 LE D + R + ++ + D Y P +I G Sbjct: 1113 SAASSTVLERAYAYDATGQLVAR--------ADTLRGRQDFRYDPTGRILAALP-ALGSA 1163 Query: 233 LA----LVSTEGAT 242 LA G Sbjct: 1164 LARELFAFDPAGNL 1177 >UniRef50_B2HAQ4 RhsD protein n=4 Tax=Burkholderia RepID=B2HAQ4_BURPS Length = 1531 Score = 178 bits (450), Expect = 5e-43, Method: Composition-based stats. Identities = 90/354 (25%), Positives = 127/354 (35%), Gaps = 60/354 (16%) Query: 15 YRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQH----------RLVHY------TR 58 Y+YD GRLT L P G +R + YDS RL R Sbjct: 1061 YQYDPMGRLT--GHLDPTGKLRE-------FSYDSAGDLLKTHFRCGRLTEIVNQGTEAR 1111 Query: 59 TQYAEPLVESRY-LYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQN 117 + + RY YD LG V KR +++ L WD L Sbjct: 1112 DWIRDGEYDGRYWAYDQLGNLVRKRELQQDLVL---------------QWDAQGLLIESL 1156 Query: 118 DRTRIQTIYQPGSFTPLIRVETATGELAKTQR---RSLADTLQQSGGEDGGSVVFP-PVL 173 + G P +R A + R + D Q+ + +V+ Sbjct: 1157 IVRSPSADPESGGDVPDVRTHYAYDAFHRRTRKIAHVVRDAGTQTAAKSDATVLRRVSRF 1216 Query: 174 VQMLDRLESEILADRVSE-------ESRRWLASCGLTVEQMQNQMDPVY------TPARK 220 D L E+ ++ E R W+ V + + Sbjct: 1217 FWDGDALAGELAEIDGAQRVAAGNWEHREWIYYPDTFVPLVSVIDAGTSCDLSRNRHGCR 1276 Query: 221 IHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEESGL 280 I Y D G P + + G W YDE G L+ + I L GQ D E+GL Sbjct: 1277 IFYYRYDANGRPTQMTDSSGREVWATGYDENGRLVPIN--ADIYNPIHLQGQYRDAETGL 1334 Query: 281 YYNRHRYYDPLQGRYITQDPIGLKGGWNFYQYPLNPVQYIDSMGLASKYGHLNN 334 +YNRHRYYDP G +I++DP+GL G N Y+Y N + + D +G +K NN Sbjct: 1335 HYNRHRYYDPALGSFISKDPLGLAAGVNLYRYAPNSIGWADPLGFQAKPSPNNN 1388 Score = 69.1 bits (167), Expect = 4e-10, Method: Composition-based stats. Identities = 68/379 (17%), Positives = 101/379 (26%), Gaps = 56/379 (14%) Query: 2 WPDNRIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDER------------THRYHYDS 49 W DN + A Y + YD R T+ TD + I +ER Y YD+ Sbjct: 552 WGDNGL---ADYRFIYDVGHRETQITDSLGHVTILQANERDLPVARIDPLGAVTSYRYDA 608 Query: 50 QHRLVHYTRTQYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMS-------LSRKPQV 102 Q R T + YD G + + + R + + + Sbjct: 609 QGRTNAQTDPAG----RTITWRYDAYGNLLMQTLPDRSVVRAEYNADHKPICLTVPGDRQ 664 Query: 103 TWYGWDGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGE 162 Y WD Q T+ Y L+ G R S Sbjct: 665 WRYAWDKRGNLVAQTTPTQASMRYGYDRHGQLV---AHMGPRGAVTRFDYDHDGNLSAVV 721 Query: 163 DGGSVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIH 222 D + + + + +VS + +E P + Sbjct: 722 DALGHLTRYTHDARANLIHTVNALGQVSRYEYDRNGNLTRAIE-----------PGGREI 770 Query: 223 LYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQYD----EES 278 D G G EY + P R ++ E Sbjct: 771 FCRYDSSGNLTRYRDPNGQVT-QLEYSPLRQIAKRLTPDGGVVEYRYDTEERLIGVVNER 829 Query: 279 GLYYNRHRYYDPLQGRYITQDPIGLKGGWNFYQY--PLNPVQYIDSMGLASKYGHLNNGG 336 G Y R GR + + I G YQY ++ +D +G A Y G Sbjct: 830 GELYQLKRD---ALGRIVEE--IDYWGQSRRYQYGAAGELLRSVDPLGQAIDYETDVLG- 883 Query: 337 YGARPNKPPTPDPSKLPDI 355 R K PDP + I Sbjct: 884 ---RIVKKRVPDPRQPGGI 899 Score = 64.1 bits (154), Expect = 1e-08, Method: Composition-based stats. Identities = 52/277 (18%), Positives = 92/277 (33%), Gaps = 36/277 (12%) Query: 7 IARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLV 66 + D + Y +D+ G L +T T + + RY YD +LV + + A Sbjct: 659 VPGDRQWRYAWDKRGNLVAQT---------TPTQASMRYGYDRHGQLVAHMGPRGA---- 705 Query: 67 ESRYLYDPLGRRVAK-------RVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDR 119 +R+ YD G A + + +++ QV+ Y +D + T + Sbjct: 706 VTRFDYDHDGNLSAVVDALGHLTRYTHDARANLIHTVNALGQVSRYEYDRNGNLTRAIEP 765 Query: 120 TRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDR 179 + + S L R G++ + + L ++ DGG V + + L Sbjct: 766 GGREIFCRYDSSGNLTRYRDPNGQVTQLEYSPLRQIAKRL-TPDGGVVEYRYDTEERLIG 824 Query: 180 LESEI---------LADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRG 230 + +E R+ EE W ++ P + Y D G Sbjct: 825 VVNERGELYQLKRDALGRIVEEIDYW-GQSRRYQYGAAGELLRSVDPLGQAIDYETDVLG 883 Query: 231 LPL--ALVSTE---GATEWCAEYDEWGNLLNEENPHQ 262 + + G YD GNL+ ENP Sbjct: 884 RIVKKRVPDPRQPGGIRTETFSYDRSGNLIVAENPDS 920 Score = 49.8 bits (117), Expect = 2e-04, Method: Composition-based stats. Identities = 37/278 (13%), Positives = 78/278 (28%), Gaps = 30/278 (10%) Query: 14 LYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHY-DSQHRLVHYTRT-------QYAEPL 65 Y YDR+G LT + + D + Y D ++ + + Sbjct: 750 RYEYDRNGNLTRAIEPGGREIFCRYDSSGNLTRYRDPNGQVTQLEYSPLRQIAKRLTPDG 809 Query: 66 VESRYLYDPLGRRVAKRVWRRERDLTGWMSLSR---------KPQVTWYGWDGDRLTTIQ 116 Y YD R + R E +L R + + YG G+ L ++ Sbjct: 810 GVVEYRYDTEERLIGVVNERGELYQLKRDALGRIVEEIDYWGQSRRYQYGAAGELLRSVD 869 Query: 117 NDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQM 176 I L R+ + +T + P V++ Sbjct: 870 PLGQAIDYETDV-----LGRIVKKRVPDPRQPGGIRTETFSYDRSGNLIVAENPDSRVEL 924 Query: 177 LDRLESEILADRVSEE---SRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPL 233 ++ +R ++ + + A+ + + + Y + G Sbjct: 925 AYDAAGRVVEERQGDDFVIAHAYDAAGNRIERRTRLNAGGEVIAHTVRYDY--NALGAVS 982 Query: 234 AL-VSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRLP 270 ++ + E D G + E +L++ + Sbjct: 983 SIQIDDAAPIT--FERDALGQIRVEHLRAELRRELSYT 1018 Score = 47.5 bits (111), Expect = 0.001, Method: Composition-based stats. Identities = 57/315 (18%), Positives = 94/315 (29%), Gaps = 61/315 (19%) Query: 15 YRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYA------------ 62 Y++DR+ L D + + HRY Y HR+V +T + Sbjct: 494 YQHDRNVDLVAAIDAM---------GQPHRYAYTDGHRMVRHTSARGVSFYYSHRQHDDG 544 Query: 63 ----------EPLVESRYLYDPLGRRVAK--------RVWRRERDLTGWMSLSRKPQVTW 104 L + R++YD +G R + + + + VT Sbjct: 545 VWRVDHAWGDNGLADYRFIYD-VGHRETQITDSLGHVTILQANERDLPVARIDPLGAVTS 603 Query: 105 YGWDGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRS---------LADT 155 Y +D T Q D ++ ++ L+ + + + + D Sbjct: 604 YRYDAQGRTNAQTDPAGRTITWRYDAYGNLLMQTLPDRSVVRAEYNADHKPICLTVPGDR 663 Query: 156 LQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVY 215 + + G++V Q R + V+ R A + N V Sbjct: 664 QWRYAWDKRGNLVAQTTPTQASMRYGYDRHGQLVAHMGPR-GAVTRFDYDHDGNLSAVVD 722 Query: 216 TPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQYD 275 H D R + V+ G EYD GNL P + R Sbjct: 723 ALGHLTRYTH-DARANLIHTVNALGQ-VSRYEYDRNGNLTRAIEPGGREIFCRY------ 774 Query: 276 EESGLYYNRHRYYDP 290 + SG N RY DP Sbjct: 775 DSSG---NLTRYRDP 786 >UniRef50_D1S833 YD repeat protein n=1 Tax=Micromonospora aurantiaca ATCC 27029 RepID=D1S833_9ACTO Length = 3829 Score = 178 bits (450), Expect = 6e-43, Method: Composition-based stats. Identities = 80/322 (24%), Positives = 113/322 (35%), Gaps = 33/322 (10%) Query: 7 IARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLV 66 IA A Y YD R+T D + + D R+ V Sbjct: 2285 IADAAERRYTYDAADRVTAIADSLAGD---------QSFTADDTGRIRAVD------GDV 2329 Query: 67 ESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTIY 126 RY YD G V + TG M + Y G RLT +D + + Sbjct: 2330 PQRYDYDEAGNLVG--AGGGRWEFTGTMLVRSDDATFSYDAKG-RLTGRVDDAGAWR--F 2384 Query: 127 QPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILA 186 + + ++ T G+ + + + + DG V+ D + + Sbjct: 2385 EWDAEDRMVLAVTPGGDRWRYRYDGFGRRIAKQRLGDGDRVLEEVSFAWSGDLMLEQTHR 2444 Query: 187 DRVSEESRR-WLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWC 245 D + W V Q T + D G P LV G W Sbjct: 2445 DAAGATTTTTWDYRPDAAVPVAQ-------TDDGTLRAVITDTIGTPTHLVEPGGGLRWW 2497 Query: 246 AEYDEWGNLLNEENPHQLQQLIRLPGQQYDEESGLYYNRHRYYDPLQGRYITQDPIGLKG 305 + D WG + + PGQ D E+GL+YNR RYYDP GRY++ DP+GL G Sbjct: 2498 SRGDLWGR-----GADRTATPLAFPGQYVDAETGLHYNRFRYYDPATGRYVSPDPLGLSG 2552 Query: 306 GWNFYQYPLNPVQYIDSMGLAS 327 G N Y NP+ D +GL S Sbjct: 2553 GPNPTAYVSNPLTVADPLGLTS 2574 Score = 66.7 bits (161), Expect = 2e-09, Method: Composition-based stats. Identities = 57/292 (19%), Positives = 88/292 (30%), Gaps = 52/292 (17%) Query: 3 PDNRIARDAHYL-YRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQY 61 P R+ + + + YD RL T+ RT Y YD+ RL T Sbjct: 2074 PTARVDQAGNRTEFTYDTELRLVGVTN---------PAGRTWHYEYDAAGRLCGQTDFDG 2124 Query: 62 AEPLVE-----------------SRYLYDPLG----RRVAKRVWRRERDLTGWMSLSRKP 100 E +RY +D G RRV V R E D G ++ P Sbjct: 2125 RTQRYEHDEAGRLVAHTDAAGTVTRYRWDARGRVVERRVGDAVTRVEYDADGHVAAVLSP 2184 Query: 101 Q-VTWYGWD--GDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQ 157 + D G L+ N RT S+T VE T ++ R + + Sbjct: 2185 DAQVRFTRDAEGRVLSETINGRTVRT------SYTASGTVEARTTPSGRSSRWTFDAAGR 2238 Query: 158 QSGGEDGGSVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYT- 216 G ++ E + + + A+ LT + + + + YT Sbjct: 2239 PESLTAGEHLL---GFTHDDAGREIGRTVGGLVALRQTFDAAGRLTGQHIADAAERRYTY 2295 Query: 217 -PARKIHLYHCDHRGLPLALVSTEGATE-------WCAEYDEWGNLLNEENP 260 A ++ G G +YDE GNL+ Sbjct: 2296 DAADRVTAIADSLAGDQSFTADDTGRIRAVDGDVPQRYDYDEAGNLVGAGGG 2347 Score = 66.0 bits (159), Expect = 3e-09, Method: Composition-based stats. Identities = 61/345 (17%), Positives = 96/345 (27%), Gaps = 81/345 (23%) Query: 2 WPDNRIARDAH-----YLYRYDRHGR--------------------LTEKTDLIPEGVIR 36 + D R+ R Y Y YD GR T TD + + Sbjct: 3407 YADGRLVRWEDRNGEWYTYTYDEAGRCVATDGKGGYLRYRFDYQPGRTVVTDSLGAVRVY 3466 Query: 37 TDDER------------THRYHYDSQHRLVHYTRTQYAEPLVESRYLYDPLGRRVAKRVW 84 ++R T R +D +RL T E YD GR VA Sbjct: 3467 ELNDRFQVVAETDALGATTRNVWDEAYRLRSTTDPLGRTTASE----YDAYGRLVAVTRP 3522 Query: 85 RRERDLTGWMSLSRKPQVT---------WYGWDGDRLTTIQNDRTRIQTIYQPGS----- 130 R +T + L R T +G DG + + ++ QP + Sbjct: 3523 DGSRSVTTYDELGRAVSWTDFDGSTRNRQFGPDGLLIAEVDASGEVVRYE-QPAADGRGT 3581 Query: 131 ---FTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILAD 187 P V ++ S+ L + LE ++ Sbjct: 3582 TTHVGPTAVVHDPARQITAVSTGQGETEYTYDALGRLFSIQDDTGLTEFGWTLEGDLAWR 3641 Query: 188 RVSEES------------RRWLASCGLTVEQMQNQMDPVYTP-----ARKIHLYHCDHRG 230 + S W+ + G + D V R + Y + R Sbjct: 3642 ENPDGSVEEFLYDGEGNLVEWVDATGRRTIREYGAFDLVTAEIDDEGNRTEYAYDTELR- 3700 Query: 231 LPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRL--PGQQ 273 + + + GAT W YD G +++E + Q GQ Sbjct: 3701 -LVRVTNPAGAT-WSYTYDPNGRMVSETDFDGRTQRYVYDAAGQL 3743 Score = 61.7 bits (148), Expect = 5e-08, Method: Composition-based stats. Identities = 34/172 (19%), Positives = 51/172 (29%), Gaps = 28/172 (16%) Query: 15 YRYDRHGRLTEKTDLIPEGVIRT------------DDERTHRYHYDSQHRLVHYTRTQYA 62 + YD G L E D IR D+ Y YD++ RLV T A Sbjct: 3651 FLYDGEGNLVEWVDATGRRTIREYGAFDLVTAEIDDEGNRTEYAYDTELRLVRVTNPAGA 3710 Query: 63 EPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSR-------KPQVTWYGWDGD-RLTT 114 Y YDP GR V++ + + + + +VT Y +D R+ Sbjct: 3711 ----TWSYTYDPNGRMVSETDFDGRTQRYVYDAAGQLVERTDAAGEVTHYTYDLLGRVVE 3766 Query: 115 IQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGS 166 + + + Y V G A + S Sbjct: 3767 RRTGESVTRIAYDAAGRV----VPAEDGGSQARLEHDAAGRVASGATMSTSS 3814 Score = 57.9 bits (138), Expect = 7e-07, Method: Composition-based stats. Identities = 28/81 (34%), Positives = 38/81 (46%), Gaps = 13/81 (16%) Query: 11 AHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRY 70 A + Y YD +GR+ +TD D RT RY YD+ +LV RT A + + Y Sbjct: 3710 ATWSYTYDPNGRMVSETDF---------DGRTQRYVYDAAGQLVE--RTDAAGEV--THY 3756 Query: 71 LYDPLGRRVAKRVWRRERDLT 91 YD LGR V +R + Sbjct: 3757 TYDLLGRVVERRTGESVTRIA 3777 Score = 57.5 bits (137), Expect = 1e-06, Method: Composition-based stats. Identities = 52/274 (18%), Positives = 77/274 (28%), Gaps = 34/274 (12%) Query: 15 YRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYLYDP 74 + YD RL E +R R YD RLV + Y YD Sbjct: 1850 FGYDDRRRLVE---------VRNSSGHETRLRYDDAGRLVRWQDRNGEW----FGYDYDE 1896 Query: 75 LGRRVAKR------VWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQP 128 GR V + D + +VT Y +D L T D + Sbjct: 1897 AGRCVRAGGGGDVLRYSLRYDDGVTHVTNSLGEVTRYEFDERHLVTAIVDPLGGTVRQE- 1955 Query: 129 GSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILAD- 187 + R+ + T L + R + DG + PP D +E + L Sbjct: 1956 --WDAAHRLLSRTDPLGRVTRFD--HEARTLTLPDGSTHPVPPRPPAHADDIEFDALGRV 2011 Query: 188 RVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWCAE 247 R + + + G T E ++ D G + ++ G E Sbjct: 2012 RATRAPDGAVTTYGWTAEGDLAWRVRPDGSTQRWFY---DGEGNLVDVIDASGRAV-SFE 2067 Query: 248 YDEWGNLLNEENPHQLQQLIRLPGQQYDEESGLY 281 Y + L Q YD E L Sbjct: 2068 YGPFD--LPTARVDQAGNRTEFT---YDTELRLV 2096 Score = 56.7 bits (135), Expect = 2e-06, Method: Composition-based stats. Identities = 40/251 (15%), Positives = 75/251 (29%), Gaps = 27/251 (10%) Query: 18 DRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYLYDPLGR 77 D G + +G T +D ++ + Q E+ Y YD LGR Sbjct: 3563 DASGEVVRYEQPAADGRGTTTHVGPTAVVHDPARQITAVSTGQG-----ETEYTYDALGR 3617 Query: 78 R------VAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQPGSF 131 + + + V + +DG+ D T +TI + G+F Sbjct: 3618 LFSIQDDTGLTEFGWTLEGDLAWRENPDGSVEEFLYDGEGNLVEWVDATGRRTIREYGAF 3677 Query: 132 TPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSE 191 L+ E L + G + + R+ SE D Sbjct: 3678 D-LVTAEIDDEGNRTEYAYDTELRLVRVTNPAGATWSYTY---DPNGRMVSETDFDG--- 3730 Query: 192 ESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEW 251 ++R++ + + + A ++ Y D G + G + YD Sbjct: 3731 RTQRYVYDAAGQLVERTD-------AAGEVTHYTYDLLGRVVE--RRTGESVTRIAYDAA 3781 Query: 252 GNLLNEENPHQ 262 G ++ E+ Sbjct: 3782 GRVVPAEDGGS 3792 Score = 54.4 bits (129), Expect = 1e-05, Method: Composition-based stats. Identities = 57/287 (19%), Positives = 83/287 (28%), Gaps = 41/287 (14%) Query: 14 LYRYDRHGRLTEKTDLIPEG---------VIRTDDERTHR--YHYDSQHRLVHYTRTQYA 62 + YD L E T+ + ++R +D Y YD R V T Sbjct: 3383 QFGYDGDLNLIEVTNSSGDPERFTYADGRLVRWEDRNGEWYTYTYDEAGRCVA---TDGK 3439 Query: 63 EPLVESRYLYDPLGRRV------AKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQ 116 + R+ Y P GR V A RV+ T WD Sbjct: 3440 GGYLRYRFDYQP-GRTVVTDSLGAVRVYELNDRFQVVAETDALGATTRNVWDEAYRLRST 3498 Query: 117 NDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQM 176 D T + ++ L+ V G + T L + + GS Sbjct: 3499 TDPLGRTTASEYDAYGRLVAVTRPDGSRSVTTYDELGRAVSWTDF--DGSTRNRQFGPDG 3556 Query: 177 LDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHL---------YHCD 227 L E + + V E A+ G V+ PAR+I Y D Sbjct: 3557 LLIAEVDASGEVVRYEQP---AADGRGTTTHVGPTAVVHDPARQITAVSTGQGETEYTYD 3613 Query: 228 HRGLPLALVSTEG--ATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQ 272 G ++ G W E G+L ENP + G+ Sbjct: 3614 ALGRLFSIQDDTGLTEFGWTLE----GDLAWRENPDGSVEEFLYDGE 3656 Score = 51.0 bits (120), Expect = 1e-04, Method: Composition-based stats. Identities = 58/292 (19%), Positives = 81/292 (27%), Gaps = 41/292 (14%) Query: 12 HYLYRYDRHGRLTEKTDLIPEG-----------VIRTDDERTHRY--HYDS-----QHRL 53 RYD GRL D E V RY YD + L Sbjct: 1868 ETRLRYDDAGRLVRWQDRNGEWFGYDYDEAGRCVRAGGGGDVLRYSLRYDDGVTHVTNSL 1927 Query: 54 VHYTRTQYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLT 113 TR ++ E + + + DPLG V + R L+ L R VT + + LT Sbjct: 1928 GEVTRYEFDERHLVTAIV-DPLGGTVRQEWDAAHRLLSRTDPLGR---VTRFDHEARTLT 1983 Query: 114 TIQNDRT----RIQTIYQPGSFTPLIRVETATGELAK--TQRRSLADTLQQSGGEDGGSV 167 R F L RV T + L DG + Sbjct: 1984 LPDGSTHPVPPRPPAHADDIEFDALGRVRATRAPDGAVTTYGWTAEGDLAWRVRPDGSTQ 2043 Query: 168 VFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYT----------P 217 + L + + R V+Q N+ + Y P Sbjct: 2044 RWFYDGEGNLVDVID--ASGRAVSFEYGPFDLPTARVDQAGNRTEFTYDTELRLVGVTNP 2101 Query: 218 ARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRL 269 A + Y D G +G T E+DE G L+ + R Sbjct: 2102 AGRTWHYEYDAAGRLCGQTDFDGRT-QRYEHDEAGRLVAHTDAAGTVTRYRW 2152 Score = 47.1 bits (110), Expect = 0.001, Method: Composition-based stats. Identities = 21/82 (25%), Positives = 30/82 (36%), Gaps = 19/82 (23%) Query: 3 PDNRIARDAHY-----LYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYT 57 P+ R+ + + Y YD G+L E+TD Y YD R+V Sbjct: 3718 PNGRMVSETDFDGRTQRYVYDAAGQLVERTDA---------AGEVTHYTYDLLGRVVERR 3768 Query: 58 RTQYAEPLVESRYLYDPLGRRV 79 + +R YD GR V Sbjct: 3769 TGE-----SVTRIAYDAAGRVV 3785 Score = 42.9 bits (99), Expect = 0.025, Method: Composition-based stats. Identities = 45/336 (13%), Positives = 79/336 (23%), Gaps = 75/336 (22%) Query: 11 AHYLYRYDRHGRLTEKTDLIPE-------------------------------------- 32 +D RL +TD + Sbjct: 1950 GTVRQEWDAAHRLLSRTDPLGRVTRFDHEARTLTLPDGSTHPVPPRPPAHADDIEFDALG 2009 Query: 33 --GVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYLYDPLGRRVAKRVWRRERDL 90 R D Y + ++ L R + R+ YD G V Sbjct: 2010 RVRATRAPDGAVTTYGWTAEGDLAWRVRPDGSTQ----RWFYDGEGNLVDVIDASGRAVS 2065 Query: 91 TGWM-------SLSRKPQVTWYGWDGD-RLTTIQNDRTRIQTIYQPGSFTPLIRVETATG 142 + + + T + +D + RL + N R Y+ + L +T Sbjct: 2066 FEYGPFDLPTARVDQAGNRTEFTYDTELRLVGVTNPAGR-TWHYEYDAAGRL-CGQTDFD 2123 Query: 143 ELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGL 202 + A L G + + ++ RV + R Sbjct: 2124 GRTQRYEHDEAGRLVAHTDAAG-------TVTRYRWDARGRVVERRVGDAVTRVEYD--- 2173 Query: 203 TVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQ 262 + V +P ++ D G L+ G T Y G + P Sbjct: 2174 ----ADGHVAAVLSPDAQVRF-TRDAEGRVLSET-INGRTV-RTSYTASGTVEARTTPSG 2226 Query: 263 LQQLIRL--PGQQYDEESGLYYNRHRYYDP--LQGR 294 G+ +G + + D GR Sbjct: 2227 RSSRWTFDAAGRPESLTAGEHLLGFTHDDAGREIGR 2262 >UniRef50_B9M2L6 YD repeat protein n=6 Tax=Geobacter sp. FRC-32 RepID=B9M2L6_GEOSF Length = 1348 Score = 177 bits (449), Expect = 8e-43, Method: Composition-based stats. Identities = 85/323 (26%), Positives = 123/323 (38%), Gaps = 42/323 (13%) Query: 11 AHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRY 70 + Y YD +G +T T+ + D+ + Y YDS RL P + Sbjct: 937 QNLTYGYDANGNITAITNTL-------DNTKNKSYTYDSLDRLGS-----GTGPWGTITW 984 Query: 71 LYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQPGS 130 YD +G R + + D +G S S Y +RLT I P + Sbjct: 985 TYDGVGNR------QTQIDSSGTSSYS-------YQSGSNRLTGITGAN--------PAT 1023 Query: 131 FTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVS 190 F TAT E K + L Q+ + GS + Q + + + + Sbjct: 1024 FGYDTNGNTAT-ENGKIYTYNQNQRLIQAAANETGSYSYN-AQGQRTKKTVNGVTTYFIF 1081 Query: 191 EESRRWL---ASCGLTVEQMQNQMDPVYT-PARKIHLYHCDHRGLPLALVSTEGATEWCA 246 ++ + L A+ G E + P+ A + H DH G P + W Sbjct: 1082 DQQGQLLTESATNGTQAEYIYLSNQPLAKIDATGTNYVHTDHLGTPTMMTDAAATKVWEI 1141 Query: 247 EYDEWGNLLNEENPHQLQQLIRLPGQQYDEESGLYYNRHRYYDPLQGRYITQDPIGLKGG 306 E +G+ N L +R PGQ D ESGL YN R Y+P GRYI DP+GL G Sbjct: 1142 EARPFGDSANITGTASL--NLRFPGQYADSESGLNYNYFRDYNPGIGRYIQADPVGLDEG 1199 Query: 307 WNFYQYPLN-PVQYIDSMGLASK 328 + Y N P+ D +GL K Sbjct: 1200 VTLFIYSGNDPILNEDPLGLWVK 1222 Score = 64.4 bits (155), Expect = 9e-09, Method: Composition-based stats. Identities = 48/306 (15%), Positives = 86/306 (28%), Gaps = 58/306 (18%) Query: 15 YRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYLYDP 74 Y YD G ++ P G++ ++T Y YD +RL + + YD Sbjct: 632 YSYDSEGNKLKEEIKDPSGIL----QKTISYQYDVINRLKQIKNPDATY----TEFGYDA 683 Query: 75 LGRRVAKRVWRRERDLTGWMSLSR-------KPQVTWYGWDGDRLTTIQNDRTRIQTIYQ 127 LG R + + ++ + + +LSR T + +D + T D T Y+ Sbjct: 684 LGNRTSSKDPKQNLTTSQYDALSRLTATIQPGNVTTGFTYDTNNNLTTVTDANSNSTTYK 743 Query: 128 PGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILAD 187 + + + T A L+ G + + L R + D Sbjct: 744 YDDLGRVYQTISPDTN-TTTYSYDPAGNLKTKTDAKGIIIAYTYDDANRLTR--TSFPTD 800 Query: 188 RVSEESRRWLASCGLTVEQMQNQMDP---VYTPARKIH-------------LYHCDHRGL 231 S + V + +Q YT +I Y D G Sbjct: 801 PAITYSYDTCINGKGRVCTITDQSGTTTYEYTKKGQIAKETRTIDGIAYITQYTYDMNGN 860 Query: 232 PLALVSTEGATEWCA------------------------EYDEWGNLLNEENPHQLQQLI 267 ++ G + Y +G + + L + I Sbjct: 861 TKTIIYPSGRVITYSYSNDKPTTVSSTYAGITTTIANNISYKPFGGMTALTYGNGLARTI 920 Query: 268 RLPGQQ 273 Q Sbjct: 921 TYDNQY 926 Score = 54.0 bits (128), Expect = 1e-05, Method: Composition-based stats. Identities = 42/299 (14%), Positives = 76/299 (25%), Gaps = 54/299 (18%) Query: 6 RIARDAHYLYRYDRHGRLTEKTDLI-------------PEGVIRTDDERTHRYHYDSQHR 52 R + YD +G + KT+ + G I + Y YD+ R Sbjct: 507 RTDVQDVTTFTYDANGNMLTKTEALIGTTRYDNYDALGNPGTITDPNGNATTYTYDTAGR 566 Query: 53 LVHYTRTQYAEPLVESRYLYD-------------------PLGRRVAKRVWRRERDLTGW 93 + P + Y Y P G R+ + LT Sbjct: 567 ALFVKAPGDINP---TEYTYTTGGCGSCGGSTNRIASIIQPEGNRID-YTYDTNGKLTKI 622 Query: 94 MSLSRKPQVTWYGWDGDRLTTIQNDRTRI---QTIYQPGSFTPLIRVETATGELAKTQRR 150 Y +G++L D + I YQ L +++ + Sbjct: 623 ADSQNNSINYSYDSEGNKLKEEIKDPSGILQKTISYQYDVINRLKQIKNPDATYTEFGYD 682 Query: 151 SLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQ 210 +L + + + D L + + + + + + Sbjct: 683 ALGNRTSSKDPKQ-------NLTTSQYDALSRLTATIQPGNVTTGFTYDTNNNLTTVTDA 735 Query: 211 MDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRL 269 T Y D G +S + T YD GNL + + + Sbjct: 736 NSNSTT-------YKYDDLGRVYQTISPDTNTT-TYSYDPAGNLKTKTDAKGIIIAYTY 786 Score = 47.1 bits (110), Expect = 0.002, Method: Composition-based stats. Identities = 43/273 (15%), Positives = 74/273 (27%), Gaps = 42/273 (15%) Query: 9 RDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVES 68 Y YD G L KTD + Y YD +RL + Sbjct: 757 DTNTTTYSYDPAGNLKTKTDAKGIIIA---------YTYDDANRLTRTSFPTDP----AI 803 Query: 69 RYLYDPL----GRR--VAKRVWRRERDLTGWMSLSRKPQV-------TWYGWD--GDRLT 113 Y YD GR + + + T ++++ + T Y +D G+ T Sbjct: 804 TYSYDTCINGKGRVCTITDQSGTTTYEYTKKGQIAKETRTIDGIAYITQYTYDMNGNTKT 863 Query: 114 TIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVL 173 I I Y S V + + T +++ + Sbjct: 864 IIYPSGRVITYSY---SNDKPTTVSSTYAGITTTIANNISYKPFGGMTALTYGNGLARTI 920 Query: 174 VQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHC-DHRGLP 232 S ++ + + + A+ +T + + K + Y D G Sbjct: 921 TYDNQYRISTMITGTLQNLTYGYDANGNIT-----AITNTLDNTKNKSYTYDSLDRLGS- 974 Query: 233 LALVSTEGATEWCAEYDEWGNLLNEENPHQLQQ 265 G W YD GN + + Sbjct: 975 --GTGPWGTITW--TYDGVGNRQTQIDSSGTSS 1003 Score = 46.3 bits (108), Expect = 0.002, Method: Composition-based stats. Identities = 48/313 (15%), Positives = 91/313 (29%), Gaps = 61/313 (19%) Query: 16 RYDRHGRLTEKTDLIPEGVIRTDDERTH------------------------RYHYDSQH 51 +D +G++ ++TD + +++T Y YDS Sbjct: 357 EFDDNGQVAKETDTLGNVTTYIRNQQTWITRKEQWENTGTIASPTLVLKAAINYTYDSIG 416 Query: 52 RLVHYTRTQYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWD--G 109 ++ T+ ++ Y YDP + + + ++T + +D G Sbjct: 417 NVLTSTQAPGTPQEKQAIYTYDP-------TFNHQTSESAASVVNPAISKITSHTYDSKG 469 Query: 110 DRLTTIQ----NDRTRIQTI--YQPGSFTPLIRVE---------------------TATG 142 +R +T + D T Y+ + + R++ T T Sbjct: 470 NRQSTTETGLLGDGTPYSYATTYENDANGRVTRIDGPRTDVQDVTTFTYDANGNMLTKTE 529 Query: 143 ELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGL 202 L T R D L G + R ++ + Sbjct: 530 ALIGTTRYDNYDALGNPGTITDPNGNATTYTYDTAGRALFVKAPGDINPTEYTYTTGGCG 589 Query: 203 TVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQ 262 + N++ + P Y D G + ++ + YD GN L EE Sbjct: 590 SCGGSTNRIASIIQPEGNRIDYTYDTNGKLTKIADSQNNSIN-YSYDSEGNKLKEEIKDP 648 Query: 263 LQQLIRLPGQQYD 275 L + QYD Sbjct: 649 SGILQKTISYQYD 661 Score = 42.9 bits (99), Expect = 0.031, Method: Composition-based stats. Identities = 29/168 (17%), Positives = 43/168 (25%), Gaps = 47/168 (27%) Query: 8 ARDAHYLYRYDRHG---------------------RLTEKTDLIPEGVIRTDDERTHR-- 44 + YD G RLT T P + T Sbjct: 977 GPWGTITWTYDGVGNRQTQIDSSGTSSYSYQSGSNRLTGITGANPATFGYDTNGNTATEN 1036 Query: 45 ---YHYDSQHRLVHYTRTQYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQ 101 Y Y+ RL+ + Y Y+ G+R K V Sbjct: 1037 GKIYTYNQNQRLIQAAANETG------SYSYNAQGQRTKKTVNGVTTYF----------- 1079 Query: 102 VTWYGWDGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQR 149 + G LT + T+ + IY S PL +++ T Sbjct: 1080 --IFDQQGQLLTESATNGTQAEYIY--LSNQPLAKIDATGTNYVHTDH 1123 Score = 42.5 bits (98), Expect = 0.040, Method: Composition-based stats. Identities = 41/286 (14%), Positives = 70/286 (24%), Gaps = 38/286 (13%) Query: 10 DAHYLYRYDRHGRLTEKTDLIP----EGVIRTDDERTHRYHYDSQHRLV-----HYTRTQ 60 D Y YD+ GR+ +T E + + D L+ Sbjct: 301 DGPYANTYDKAGRVVRQTHGTGQIDIEYTVPRKTTKVTTTIKDGTGLLLNTNIRTVEFDD 360 Query: 61 YAEPLVESRYLYDPLGRR-----------VAKRVWRRERDLTGWMSLSRKPQVTWYGWDG 109 + E+ D LG K W + + + Y G Sbjct: 361 NGQVAKET----DTLGNVTTYIRNQQTWITRKEQWENTGTIASPTLVLKAAINYTYDSIG 416 Query: 110 DRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVF 169 + LT+ Q T + +T T E A + + + G+ Sbjct: 417 NVLTSTQAPGTPQEKQ---AIYTYDPTFNHQTSESAASVVNPAISKITSHTYDSKGNRQS 473 Query: 170 PPVLVQMLDRLESEILADRVSEESRRWLASCG----------LTVEQMQNQMDPVYTPAR 219 + D ++ + R G T + N + Sbjct: 474 TTETGLLGDGTPYSYATTYENDANGRVTRIDGPRTDVQDVTTFTYDANGNMLTKTEALIG 533 Query: 220 KIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQ 265 + D G P + G YD G L + P + Sbjct: 534 TTRYDNYDALGNPGTITDPNGNAT-TYTYDTAGRALFVKAPGDINP 578 >UniRef50_A3NNM1 Protein RhsD n=20 Tax=pseudomallei group RepID=A3NNM1_BURP6 Length = 1539 Score = 177 bits (448), Expect = 1e-42, Method: Composition-based stats. Identities = 74/327 (22%), Positives = 114/327 (34%), Gaps = 44/327 (13%) Query: 6 RIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPL 65 R +DR G + R D E+ +D +L + A Sbjct: 1111 RDGEYEGCYCAFDRAGNMV----------HRRDAEQNLALCWDPAGQLRETIALRPATAD 1160 Query: 66 V-------ESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQND 118 V ++Y YD L RR K V S V+ + WDGD L + Sbjct: 1161 VASARKRTRTQYEYDALRRRTRKLVQIESEGEPD----SVFSYVSCFFWDGDALVGERTT 1216 Query: 119 RTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLD 178 G R E + S A + + V Sbjct: 1217 G---------GWVGRAGRAEEDERDATSLAPPSPAGSKNGNWLTLQPDHVCEWFYYPRTF 1267 Query: 179 RLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVST 238 + + ++ + A + Y D G P+ ++ Sbjct: 1268 HPLGVVHCYAGEKR-------------ELARATVGSPSKADATYFYQSDPNGAPVRMLDV 1314 Query: 239 EGATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEESGLYYNRHRYYDPLQGRYITQ 298 EG W A YD G + + + Q +RL GQ +D E+G+ YNRHRYYD G+++++ Sbjct: 1315 EGNVAWEASYDANGGI-EQFGIQAMPQPLRLQGQYFDAETGMSYNRHRYYDARIGQFVSE 1373 Query: 299 DPIGLKGGWNFYQYPLNPVQYIDSMGL 325 DPI L GG N Y+Y +N + + D +GL Sbjct: 1374 DPIRLSGGENLYRYCVNSISWADPLGL 1400 Score = 68.7 bits (166), Expect = 5e-10, Method: Composition-based stats. Identities = 52/273 (19%), Positives = 83/273 (30%), Gaps = 30/273 (10%) Query: 12 HYLYRYDRHGRLTEKTDLIPEGVIRTDDE------------RTHRYHYDSQHRLVHYTRT 59 + YD +G L +T V D R RY +D L R+ Sbjct: 619 TTAWEYDAYGSLVAQTLPDGSVVRAEYDADGRPVCITMPTARQLRYEWDEHGHL----RS 674 Query: 60 QYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDR 119 + SRY+YD G+ V+ R + VT G+R +++ R Sbjct: 675 RTTSSRAVSRYVYDAYGQLVSYSGSRGAITRFEYDRDGNLAAVT--DALGNRTRYVRDAR 732 Query: 120 TRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDR 179 R+ + P L + ++ +DG V + Q Sbjct: 733 GRVVWMADPRGQVGLYEYDGNGNLTRAVLPG--GKEIRCEFDDDGNLVHYRDAAGQ---- 786 Query: 180 LESEILADRVSEESRRWLASCGLTVEQMQN---QMDPVYTPARKIHLYHCDHRGLPLALV 236 S LA R +A G V+ + Q+ V + + D G ++ Sbjct: 787 --STTLAYSPIGLVERRIAPSGGIVDCRYDTEGQLVGVVNERGEQYALKRDPLGRIVSES 844 Query: 237 STEGATEWCAEYDEWGNLLNEENPHQLQQLIRL 269 G T W Y G LL +P + Sbjct: 845 DYWGQT-WHYRYGGSGELLCSTDPLGRVVEYQY 876 Score = 55.2 bits (131), Expect = 6e-06, Method: Composition-based stats. Identities = 47/264 (17%), Positives = 83/264 (31%), Gaps = 32/264 (12%) Query: 9 RDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVES 68 R Y + D GR+ ++D +T Y Y L T +VE Sbjct: 826 RGEQYALKRDPLGRIVSESDY---------WGQTWHYRYGGSGEL--LCSTDPLGRVVE- 873 Query: 69 RYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWD--GDRLTTIQNDRTRIQTIY 126 Y YD GR V K D QV + +D G+ L +ND +R++ + Sbjct: 874 -YQYDRCGRIVEKLARASADDAF--------VQVHRFAYDQCGN-LILAENDDSRVEFCH 923 Query: 127 QPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILA 186 +E G+ A + E ++ L++ + E ++L Sbjct: 924 DADGRV----IEEKQGDDFTINNVFDA---AGNRIERRTRLLSEGALIEHVVHYEYDVLN 976 Query: 187 DRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGAT-EWC 245 VS A + Q + + R+ Y + L ++ G Sbjct: 977 AVVSIRIDGSAAVVIERDDLGQAVSEGLGPALRRAFSYEAGGQLAVQTLFASTGTMFASE 1036 Query: 246 AEYDEWGNLLNEENPHQLQQLIRL 269 YD G ++ + + + Sbjct: 1037 YAYDPNGEVIEKRDERGRMERFEY 1060 Score = 47.5 bits (111), Expect = 0.001, Method: Composition-based stats. Identities = 48/271 (17%), Positives = 88/271 (32%), Gaps = 36/271 (13%) Query: 9 RDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVES 68 R A + YDR G L TD + RY D++ R+V + L Sbjct: 700 RGAITRFEYDRDGNLAAVTDAL---------GNRTRYVRDARGRVVWMADPRGQVGL--- 747 Query: 69 RYLYDPLGRRVA---------KRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDR 119 Y YD G + + + +L + + + Y G L + Sbjct: 748 -YEYDGNGNLTRAVLPGGKEIRCEFDDDGNLVHYRDAAGQSTTLAYSPIG--LVERRIAP 804 Query: 120 TRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDR 179 + + + L+ V GE +R L + +S G + + L Sbjct: 805 SGGIVDCRYDTEGQLVGVVNERGEQYALKRDPLGRIVSESDYW-GQTWHYRYGGSGEL-L 862 Query: 180 LESEILADRVSEESRRWLASCGLTVEQ-MQNQMDPVYTPARKIHLYHCDHRGLPLALVST 238 ++ L V + R CG VE+ + D + ++H + D G + + Sbjct: 863 CSTDPLGRVVEYQYDR----CGRIVEKLARASADDAFV---QVHRFAYDQCGNLILAEND 915 Query: 239 EGATEWCAEYDEWGNLLNEENPHQLQQLIRL 269 + E+C + D G ++ E+ Sbjct: 916 DSRVEFCHDAD--GRVIEEKQGDDFTINNVF 944 Score = 42.5 bits (98), Expect = 0.038, Method: Composition-based stats. Identities = 24/119 (20%), Positives = 35/119 (29%), Gaps = 23/119 (19%) Query: 3 PDNRIARDAHY-----------LYRYDRHGRLT------------EKTDLIPEGVIRTDD 39 NRI R Y YD + E+ DL Sbjct: 947 AGNRIERRTRLLSEGALIEHVVHYEYDVLNAVVSIRIDGSAAVVIERDDLGQAVSEGLGP 1006 Query: 40 ERTHRYHYDSQHRLVHYTRTQYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSR 98 + Y++ +L T + S Y YDP G + KR R + + S+ R Sbjct: 1007 ALRRAFSYEAGGQLAVQTLFASTGTMFASEYAYDPNGEVIEKRDERGRMERFEYDSVGR 1065 >UniRef50_A6M1K5 YD repeat protein n=4 Tax=Clostridium RepID=A6M1K5_CLOB8 Length = 2553 Score = 176 bits (447), Expect = 1e-42, Method: Composition-based stats. Identities = 80/365 (21%), Positives = 134/365 (36%), Gaps = 46/365 (12%) Query: 12 HYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYL 71 Y Y YD +G +K + + Y YDS +RLV E + Sbjct: 2036 DYNYAYDLNGNRLQKVS----------SKHKNFYSYDSMNRLVDSRYDDRCE-----SFT 2080 Query: 72 YDPLGRRVAKRVWRRERDLTGWM-----SLSRKPQVTWYGWDGDRLTTIQNDRTRIQTIY 126 YD +G R+ K + L + + +D + TI+ + I+ Sbjct: 2081 YDKVGNRLTKTTNDITEKYVYNVKNQLKELHNNSGINHFTYD-KQGNTIKEETQNGNNIF 2139 Query: 127 QPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILA 186 + S ++ T G ++ + + E +F V +E++ Sbjct: 2140 EYNSLNQQVKAITKEGNTLVSRYDTEGLRAEIEENEKLTKFIFHKENVL----VEADKDF 2195 Query: 187 DRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWCA 246 + +S +R + VE + D ++ + Y D +G + + + Sbjct: 2196 NAISRFTRGYEVVAADIVEASKYS-DSKFSSNIGRYYYTTDEQGSTVLITDKYRNVKNEY 2254 Query: 247 EYDEWGNLLNEENPHQLQQLIRLPGQQYDEESGLYYNRHRYYDPLQGRYITQDPIGLKGG 306 YD + N+L + Q+ + GQQYD + YY R R+Y+PL GR+ +D I G Sbjct: 2255 YYDPFCNVLG--SNEQVHNRVTYTGQQYDSITKQYYLRARFYNPLIGRFAQED-IYRGDG 2311 Query: 307 WNFYQYP-LNPVQYIDSMGLASKYGHLNNGGYGARPNKPPTPDPSKLPDIAKQLRLPYPI 365 N Y Y NPV+Y D G Y L+N Y + L DIAK++R Sbjct: 2312 LNLYAYCGNNPVRYYDPSG----YAFLDNLQYDS------------LKDIAKRMRQVPGK 2355 Query: 366 DQASS 370 Sbjct: 2356 KAKYG 2360 Score = 73.7 bits (179), Expect = 1e-11, Method: Composition-based stats. Identities = 49/304 (16%), Positives = 93/304 (30%), Gaps = 48/304 (15%) Query: 8 ARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQY------ 61 D +Y YD G L EK + + T R+ YDS R++ T Sbjct: 1081 NEDKEIIYTYDSQGNLLEKKTKLSAA-----NWITERFTYDSYGRILSKTDGNGNTSKYE 1135 Query: 62 -------------------AEPLVESRYLYDPLGRRVAKRV--------WRRERDLTGWM 94 E Y YD +GR + + Sbjct: 1136 YENASSLEGKQGKDPVRVITSSGYEYEYTYDKVGRNTEITTDYGTIEFGYNNLNFVASIK 1195 Query: 95 SLSRKPQVTWYGWDGDRLTTIQNDRTRIQ-------TIYQPGSFTPLIRVETATGELAKT 147 + + Y G+ LT++ I+ Y LI ++ G + K Sbjct: 1196 DANGNVTIKNYDNMGN-LTSLYTPNACIKGSISDEGYKYTYDHMDRLISIKNPIGIIEKN 1254 Query: 148 QRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSE--ESRRWLASCGLTVE 205 R S + +++ + + V+ ++ + + R + S G ++ Sbjct: 1255 IRDSEGNIIKEINPNYYNPETYDGIGVEYAYDKDNRKIKTIYPDGGIERFFYDSNGNVIK 1314 Query: 206 QMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQ 265 + + T + Y D ++++ +G E EYD GN++ E + Sbjct: 1315 HISPEYYNEETDDGLGYSYTYDSTNRLSSIINEDGVVEKRFEYDLHGNIIKEVDVEGNST 1374 Query: 266 LIRL 269 L + Sbjct: 1375 LFKY 1378 Score = 61.7 bits (148), Expect = 5e-08, Method: Composition-based stats. Identities = 43/310 (13%), Positives = 81/310 (26%), Gaps = 53/310 (17%) Query: 10 DAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESR 69 + YD RL E D RY YD ++ + + Sbjct: 1433 YHEIYFEYDEENRLIEVKDKYGAKA---------RYKYDCLNKKTYESFKINDTTTKAIH 1483 Query: 70 YLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWD--------------------- 108 Y+YD +G K+ ++ +T Y +D Sbjct: 1484 YIYDKVGNLTQKKEEINGGFVSPETKGRNVWAITSYEYDKNGNITKITTPKGYEIGRVYD 1543 Query: 109 -GDRLTTIQN----DRTRIQTIYQPGSFTPLIRVETATGELAKTQ------------RRS 151 DR+ + +Y +I + +GE AK S Sbjct: 1544 KADRVIEQHEKDEANGIFRSYVYNYDKTDNIISISEYSGEEAKLISNKYTSENNYMVHWS 1603 Query: 152 LADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADR----VSEESRRWLASCGLTVEQM 207 ++ + + F + +S+ +R + ++Q+ Sbjct: 1604 ERYENRKENEKLFEKIGFKEEQKKKAYTYDSQNRLTHFINFSGNITRLFYDKNDRIIKQV 1663 Query: 208 QNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLI 267 + Y + +G + + + G T YD GNL + + Sbjct: 1664 LPEQYDNEKDDGVGTTYSYNLKGQVIEVKNALGETVTKNTYDPKGNLKTRVDGENNKVEY 1723 Query: 268 RLP--GQQYD 275 GQ D Sbjct: 1724 TYTLLGQIKD 1733 Score = 61.0 bits (146), Expect = 9e-08, Method: Composition-based stats. Identities = 44/292 (15%), Positives = 85/292 (29%), Gaps = 40/292 (13%) Query: 8 ARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVE 67 A Y YD++G +T+ T + R YD R++ A + Sbjct: 1512 NVWAITSYEYDKNGNITKITTPKGYEIGRV---------YDKADRVIEQHEKDEANGIFR 1562 Query: 68 SR-YLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQ--VTWYGWDGDRLTTIQNDRT---- 120 S Y YD ++ + E + + V W +R + Sbjct: 1563 SYVYNYDKTDNIISISEYSGEEAKLISNKYTSENNYMVHWSERYENRKENEKLFEKIGFK 1622 Query: 121 --RIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLD 178 + + Y S L +G + + ++Q E + V Sbjct: 1623 EEQKKKAYTYDSQNRLTHFINFSGNITRLFYDKNDRIIKQVLPEQYDNEKDDGVGTTYSY 1682 Query: 179 RLESEI------LADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKI----------- 221 L+ ++ L + V++ + + V+ N+++ YT +I Sbjct: 1683 NLKGQVIEVKNALGETVTKNTYDPKGNLKTRVDGENNKVEYTYTLLGQIKDIVTPNSRKE 1742 Query: 222 ----HLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRL 269 Y D RG + G D+WG ++ P + Sbjct: 1743 NKSAQSYKYDARGNITGITDGNGNET-SYLLDDWGRIIQITTPEGGSEKYTY 1793 Score = 55.6 bits (132), Expect = 4e-06, Method: Composition-based stats. Identities = 56/308 (18%), Positives = 95/308 (30%), Gaps = 64/308 (20%) Query: 1 MWPDNRIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQ 60 ++PD I + YD +G + K TDD + Y YDS +RL Sbjct: 1295 IYPDGGIE-----RFFYDSNGNVI-KHISPEYYNEETDDGLGYSYTYDSTNRLSSIINED 1348 Query: 61 YAEPLVESRY---------------------LYDPLGRRVAKRVWRRERDLTGWMSLSRK 99 +VE R+ YD G + KRV E+D G + + Sbjct: 1349 G---VVEKRFEYDLHGNIIKEVDVEGNSTLFKYDLAGNLIEKRVP-AEKDNIGNVKYN-- 1402 Query: 100 PQVTWYGWD----------GDRLTTIQNDRTRIQTIY-QPGSFTPLIRVETATGELAKTQ 148 +T Y +D G L + IY + LI V+ G A+ + Sbjct: 1403 --LTCYAYDKNSNKILERHGINLVSENEICNYYHEIYFEYDEENRLIEVKDKYGAKARYK 1460 Query: 149 RRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQ 208 L +S + + + D+V +++ G V Sbjct: 1461 YDCLNKKTYESFKINDTTTK------------AIHYIYDKVGNLTQKKEEINGGFVSP-- 1506 Query: 209 NQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIR 268 + I Y D G + + +G YD+ ++ + + + R Sbjct: 1507 ---ETKGRNVWAITSYEYDKNGNITKITTPKGYEIGR-VYDKADRVIEQHEKDEANGIFR 1562 Query: 269 LPGQQYDE 276 YD+ Sbjct: 1563 SYVYNYDK 1570 Score = 44.8 bits (104), Expect = 0.006, Method: Composition-based stats. Identities = 41/246 (16%), Positives = 79/246 (32%), Gaps = 29/246 (11%) Query: 22 RLTEKTDLIPEGVIR---TDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYLYDPLGRR 78 + TE+T EG+I +D T Y YD ++ E+ +YD G Sbjct: 999 QRTERTRFNKEGLITHLFYEDGTTEEYKYDDYQNKIYIKDRNG----FETHKVYDEFGNL 1054 Query: 79 VAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQPGSFTPLIRVE 138 + + + VT Y +D + + D + IY S L+ + Sbjct: 1055 LKETLPNGL--------------VTDYTYDENGNLIKETDNEDKEIIYTYDSQGNLLEKK 1100 Query: 139 TATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSEESRRWLA 198 T R D+ + + G+ + + L + ++ R + Sbjct: 1101 TKLSAANWITERFTYDSYGRILSKTDGN-----GNTSKYEYENASSLEGKQGKDPVRVIT 1155 Query: 199 SCGLTVEQMQNQM--DPVYTPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLN 256 S G E +++ + T + ++ ++ G YD GNL + Sbjct: 1156 SSGYEYEYTYDKVGRNTEITTDYGTIEFGYNNLNFVASIKDANGNVTIK-NYDNMGNLTS 1214 Query: 257 EENPHQ 262 P+ Sbjct: 1215 LYTPNA 1220 Score = 44.8 bits (104), Expect = 0.008, Method: Composition-based stats. Identities = 19/100 (19%), Positives = 34/100 (34%), Gaps = 13/100 (13%) Query: 3 PDNRIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYA 62 P++R + Y+YD G +T TD + Y D R++ T + Sbjct: 1737 PNSRKENKSAQSYKYDARGNITGITD---------GNGNETSYLLDDWGRIIQITTPEGG 1787 Query: 63 EPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQV 102 +Y YD G + + SL + ++ Sbjct: 1788 S----EKYTYDYAGNITSTTDANGGTIEYIYNSLGQVCEI 1823 >UniRef50_A9C2K3 YD repeat protein n=1 Tax=Delftia acidovorans SPH-1 RepID=A9C2K3_DELAS Length = 1301 Score = 176 bits (447), Expect = 1e-42, Method: Composition-based stats. Identities = 78/378 (20%), Positives = 126/378 (33%), Gaps = 57/378 (15%) Query: 5 NRIARDAHYLYRYDRHGR--LTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYA 62 ++A +D GR L ++ ++P + + + YD+ RL + + Sbjct: 793 GQLASSQLLNLTWDAAGRISLIQQRHMLPGTAAAQQAKLSSAFSYDAVGRLTASAHSAPS 852 Query: 63 E-------------PLVESRYLYDPLGRRVAKRVWRRERDLTG-----WMSLSRKPQVTW 104 L S Y +D G R T + + + ++ Sbjct: 853 GLTLPTGWSLADTIELSASGYAWDANGNRTQVHYSNALASGTSTLQRNYQTAAGTNRLQS 912 Query: 105 YGWDGDR-LTTIQNDRTRIQTIYQ------------PGSFTPLIRVETATGELAKTQRRS 151 Y R + QN G+ + + Sbjct: 913 YAQTLQRPGSAAQNSNVTFSYDAAGALVKKGDNHLHYGADGRIAKAGEYADAADARAVSY 972 Query: 152 LADTLQQSGGEDGGSVVFPPVLVQML---DRLESEILADRVSEESRRWLASCGLT----- 203 + + L Q + P +Q L D + S +L ++ S A G + Sbjct: 973 VYNALGQRVLKSDARGAGQPATLQTLYAEDGIGSTVLGQYANQRSANSAAPAGQSDSTEI 1032 Query: 204 --VEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPH 261 + M +++ H DH P L + +G W +G + Sbjct: 1033 IYLPTASGPMPIAAEINGRLYAIHTDHLNTPRRLTNQQGQVAWQWLISGFGEVRPTTGDR 1092 Query: 262 QLQQ-------------LIRLPGQQYDEESGLYYNRHRYYDPLQGRYITQDPIGLKGGWN 308 Q +R PGQ +DEE+GL YN HRYYD GRYI DPIGL GGWN Sbjct: 1093 GYGQTVSGPSYAQAVKFDLRYPGQVFDEETGLSYNLHRYYDAATGRYIQADPIGLAGGWN 1152 Query: 309 FYQYPL-NPVQYIDSMGL 325 + Y NP+ ++D +GL Sbjct: 1153 RFGYVGENPLSFVDPLGL 1170 Score = 42.1 bits (97), Expect = 0.052, Method: Composition-based stats. Identities = 41/267 (15%), Positives = 78/267 (29%), Gaps = 17/267 (6%) Query: 3 PDNRIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYA 62 P+ L+ YD G + T+ + H++ +D R++ T A Sbjct: 361 PETYTDAAGQTLFGYDTRGNRNKVTNAL---------GHVHQFAHDGAGRIL----TAMA 407 Query: 63 EPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRI 122 +E Y Y+P G+ V ++ LT ++ R +T+ +G +T +D RI Sbjct: 408 PSGLERSYSYNPRGQLTRVSVGGQQTTLT-YLPNDRLGTITF--ANGHAITYQYDDARRI 464 Query: 123 QTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLES 182 + ++ ++ + S A T Q G ++ Sbjct: 465 NRWSDNRGNSGQYVLDQWDNRTSELIKDSAAQTALQMQRSINGINRISSETIRGNQSTAL 524 Query: 183 EILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGAT 242 A+ + L ++ + P + A +G Sbjct: 525 TYDANGDLATASNGLGQTTTLDVDGLRRLTKITDPLNASATLSYNALDAVTAAQDFKG-V 583 Query: 243 EWCAEYDEWGNLLNEENPHQLQQLIRL 269 D GN E P Sbjct: 584 TTTYTRDALGNAKAETTPDAGNSTTTY 610 >UniRef50_C7QG23 YD repeat protein n=2 Tax=Catenulispora acidiphila DSM 44928 RepID=C7QG23_CATAD Length = 1528 Score = 176 bits (446), Expect = 2e-42, Method: Composition-based stats. Identities = 83/353 (23%), Positives = 126/353 (35%), Gaps = 37/353 (10%) Query: 7 IARDAHYLYRYDRHGRLTEK------TDLIPEGVIRTDD---------ERTHRYHYDSQH 51 I A ++D GRL + T L R D +Y D++ Sbjct: 1013 IDGGARLTQQFDALGRLAGQRLAGDTTLLERSYSYRADGIPVAVSDSLRGARQYEVDAEG 1072 Query: 52 RLVHYTRTQYAEPLVESRYLYDPLGR-----RVAKRVWRRERDLTGWMSLSRKPQVTWYG 106 R++ ++E Y YD G R A R + + RK T Y Sbjct: 1073 RVLSVQAQTWSE-----SYSYDAFGNVAQDVRPAGRSDDSLDTPSFEGTRVRKTGRTHYD 1127 Query: 107 WDG----DRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQ-----RRSLADTLQ 157 +D R R + Y S L +V G + + RR+ L Sbjct: 1128 YDAQGRTIRAVRRTLSGQRREWNYSWDSNDQLTQVTLPDGAVWQYTYDPTGRRTGKIRLS 1187 Query: 158 QSGGEDGGSVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQ---MDPV 214 GG V F ++++++ R + V Q + P Sbjct: 1188 DDGGTPAERVWFSWDGSRLVEQVTEGADGVRTALVWDYEANDGWRPVAQRRRSWAADAPQ 1247 Query: 215 YTPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQY 274 H D G P LV+ +G+ +W +G + + H +R PGQ Sbjct: 1248 EAIDEAFHTIVTDLVGTPTELVAPDGSIDWYTTTSLYGTTIATSSDHGADCPLRFPGQFR 1307 Query: 275 DEESGLYYNRHRYYDPLQGRYITQDPIGLKGGWNFYQYPLNPVQYIDSMGLAS 327 D+E+GL+YN HRYYDP +G Y++ DP+GL N Y NP+ D +GL Sbjct: 1308 DDETGLHYNVHRYYDPERGSYLSPDPLGLAAAPNDQAYVANPMVSADPLGLIC 1360 Score = 64.8 bits (156), Expect = 7e-09, Method: Composition-based stats. Identities = 46/275 (16%), Positives = 79/275 (28%), Gaps = 48/275 (17%) Query: 11 AHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYA-------- 62 A + Y +D G + +TD R RY +D+ +L Sbjct: 853 ATWDYTFDGAGNIVAETDF---------GGRVLRYTHDAVGQLTARANGAGQVVRMERNP 903 Query: 63 --------EPLVESRYLYDPLGRRVAKRVWRRERDLT-----GWMSLSRKPQVTWYGWD- 108 P E+ Y YD GR +A T ++ + +VT + +D Sbjct: 904 MGQVVRRLAPEGETFYEYDTAGRVLAVTGPGSALSYTYDEAGRPLTEAVDGRVTEFAYDA 963 Query: 109 -GDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSV 167 G R+ + + Y P + R G +A + G + Sbjct: 964 AGRRVGRLTPSGAVSRWDYDPQA----RRATLTAGSRQVAFDFDIAGRETVRTIDGGARL 1019 Query: 168 VFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCD 227 L RL + LA + R + + + + Y D Sbjct: 1020 ---TQQFDALGRLAGQRLAGDTTLLERSYSYRADGIPVAVSDSLRGARQ-------YEVD 1069 Query: 228 HRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQ 262 G L++ YD +GN+ + P Sbjct: 1070 AEGRVLSV--QAQTWSESYSYDAFGNVAQDVRPAG 1102 Score = 61.4 bits (147), Expect = 7e-08, Method: Composition-based stats. Identities = 41/291 (14%), Positives = 79/291 (27%), Gaps = 56/291 (19%) Query: 5 NRIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHR-LVHYTRTQYAE 63 R+A + Y YD GR+ T Y YD R L + E Sbjct: 909 RRLAPEGETFYEYDTAGRVLAVT----------GPGSALSYTYDEAGRPLTEAVDGRVTE 958 Query: 64 PLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVT------WYGWD--GDRLTTI 115 + YD GRRV + + +R+ +T + +D G Sbjct: 959 ------FAYDAAGRRVGRLTPSGAVSRWDYDPQARRATLTAGSRQVAFDFDIAGRETVRT 1012 Query: 116 QNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQ 175 + R+ + R+ T L ++ G+ + Sbjct: 1013 IDGGARLTQQFDALGRLAGQRLAGDTTLLERSYSYRADGIPVAVSDSLRGARQYEVDAEG 1072 Query: 176 MLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIH-----LYHCDHRG 230 + ++++ ++ S ++ +A + + +D ++ Y D +G Sbjct: 1073 RVLSVQAQTWSESYSYDAFGNVAQDVRPAGRSDDSLDTPSFEGTRVRKTGRTHYDYDAQG 1132 Query: 231 LP-------------------------LALVSTEGATEWCAEYDEWGNLLN 256 + +GA W YD G Sbjct: 1133 RTIRAVRRTLSGQRREWNYSWDSNDQLTQVTLPDGA-VWQYTYDPTGRRTG 1182 Score = 56.7 bits (135), Expect = 2e-06, Method: Composition-based stats. Identities = 63/335 (18%), Positives = 95/335 (28%), Gaps = 55/335 (16%) Query: 15 YRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYLYDP 74 YRYD G + TD + ++ YD++ L+ T E YD Sbjct: 605 YRYDETGHVVAITDPLGGTLLS---------EYDARGHLLSGTDAIGRTTRRE----YDA 651 Query: 75 LGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQPGSFTPL 134 G A RV R + + DG +DR + ++ P Sbjct: 652 DGN--AVRVSRPDGTEITAAFAGPAQPLEVNLPDGTAWRYTYDDRGNLASVTDPAGAVST 709 Query: 135 IRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEI---LADRVSE 191 R + + T +A + +V P V R + V E Sbjct: 710 YRYDEHGAVVESTDALGMATRVANDSTGLALEIVDPVGEVTRAVRDAFGRIVEVHGAVGE 769 Query: 192 ESRRWLASCGLTVEQMQNQM-DPVYTPARKIHLY-HCDHRGLPLALVSTEGATEWCAEYD 249 GL + Q N+ +T + H H D G +EY Sbjct: 770 VVATEFTVEGLPLRQTTNEGLTTTWTYDAERHAIEHVDPLGTVT-----------RSEYG 818 Query: 250 EWGNLLNEENPHQLQQLIRLPGQQYDEESGLYYNRHRYYDPLQGRYITQDPIGLKGGWNF 309 +G L + ++ YD E L R +P + Sbjct: 819 PFGKLTARTDTTGVRHTFA-----YDTELNLV----RVTNPAGATW-------------D 856 Query: 310 YQY--PLNPVQYIDSMGLASKYGHLNNGGYGARPN 342 Y + N V D G +Y H G AR N Sbjct: 857 YTFDGAGNIVAETDFGGRVLRYTHDAVGQLTARAN 891 Score = 54.4 bits (129), Expect = 9e-06, Method: Composition-based stats. Identities = 46/279 (16%), Positives = 80/279 (28%), Gaps = 23/279 (8%) Query: 7 IARDAHYLYRYDRHGRLTEKTDLIPE-GVIRTDDERTHRYHYDSQHRLVHYTRT------ 59 + + Y YD G L TD R D+ D+ Sbjct: 681 LPDGTAWRYTYDDRGNLASVTDPAGAVSTYRYDEHGAVVESTDALGMATRVANDSTGLAL 740 Query: 60 QYAEPLVE-SRYLYDPLGRRVAKRVWRRERDLTGWM-------SLSRKPQVTWYGWDGDR 111 + +P+ E +R + D GR V E T + + + T + +D +R Sbjct: 741 EIVDPVGEVTRAVRDAFGRIVEVHGAVGEVVATEFTVEGLPLRQTTNEGLTTTWTYDAER 800 Query: 112 LTTIQNDRTRIQTIYQPGSFTPL-IRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFP 170 D T + G F L R +T L + F Sbjct: 801 HAIEHVDPLGTVTRSEYGPFGKLTARTDTTGVRHTFAYDTELNLVRVTNPAGATWDYTFD 860 Query: 171 PVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIH-----LYH 225 + + + + + A + ++ + +P+ R++ Y Sbjct: 861 GAGNIVAETDFGGRVLRYTHDAVGQLTARANGAGQVVRMERNPMGQVVRRLAPEGETFYE 920 Query: 226 CDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQ 264 D G LA+ A YDE G L E ++ Sbjct: 921 YDTAGRVLAVTGPGSAL--SYTYDEAGRPLTEAVDGRVT 957 Score = 50.6 bits (119), Expect = 1e-04, Method: Composition-based stats. Identities = 44/255 (17%), Positives = 75/255 (29%), Gaps = 41/255 (16%) Query: 13 YLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYLY 72 ++YDR GRLT D E RY +D+ R+ + Y Y Sbjct: 518 RAFQYDRPGRLTGVVDSSGEPF---------RYEHDTADRITAWVDRLG----YRYVYEY 564 Query: 73 DPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQPGSFT 132 GR V R G++S + + +D + D T+Y+ Sbjct: 565 GEDGRVV------RGIGDGGFLSAT-------FVYDDENEANTVLDSLGQPTVYRYDETG 611 Query: 133 PLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSEE 192 ++ + G ++ + L + + E AD + Sbjct: 612 HVVAITDPLGGTLLSEYDARGHLLSGTDAIGRTTRR--------------EYDADGNAVR 657 Query: 193 SRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWG 252 R + Q V P Y D RG ++ GA YDE G Sbjct: 658 VSRPDGTEITAAFAGPAQPLEVNLPDGTAWRYTYDDRGNLASVTDPAGA-VSTYRYDEHG 716 Query: 253 NLLNEENPHQLQQLI 267 ++ + + + Sbjct: 717 AVVESTDALGMATRV 731 Score = 50.6 bits (119), Expect = 1e-04, Method: Composition-based stats. Identities = 49/278 (17%), Positives = 84/278 (30%), Gaps = 53/278 (19%) Query: 18 DRHGRL---TEKTDLIPEGVIRTDDERTH--RYHYDSQHRLVHYTRTQYAEPLVESR-YL 71 DR+G P V + R D R+ ++ V R + Sbjct: 462 DRNGNRIDFVRDAQGTPTAVEHSGGYRVAVDTAATDGGLRVTGIRLLDGSQDGVIVRAFQ 521 Query: 72 YDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQPGSF 131 YD GR LTG + S +P + DR+T DR + +Y+ G Sbjct: 522 YDRPGR------------LTGVVDSSGEPFRYEHD-TADRITAWV-DRLGYRYVYEYGED 567 Query: 132 TPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSE 191 ++R G L+ T E+ + V + + R + +++ Sbjct: 568 GRVVRGIGDGGFLSATFVY---------DDENEANTVLDSLGQPTVYRYDETGHVVAITD 618 Query: 192 ESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGA---------- 241 L S + + D + R+ + D G + + +G Sbjct: 619 PLGGTLLSEYDARGHLLSGTDAIGRTTRREY----DADGNAVRVSRPDGTEITAAFAGPA 674 Query: 242 ----------TEWCAEYDEWGNLLNEENPHQLQQLIRL 269 T W YD+ GNL + +P R Sbjct: 675 QPLEVNLPDGTAWRYTYDDRGNLASVTDPAGAVSTYRY 712 >UniRef50_B5I7B2 Rhs repeat protein n=1 Tax=Streptomyces sviceus ATCC 29083 RepID=B5I7B2_9ACTO Length = 1249 Score = 176 bits (445), Expect = 2e-42, Method: Composition-based stats. Identities = 77/346 (22%), Positives = 116/346 (33%), Gaps = 66/346 (19%) Query: 9 RDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQH-------------RLVH 55 R Y D R+T T + + +Y Y++ + Sbjct: 803 RTGRRTYTLDAASRITAVTA----------EGWSEQYAYNTAGDQMHAALPPGTPGQDTA 852 Query: 56 YTRTQYAEPL---VESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDG-DR 111 RT + + Y YD GR KRV +LS K + WD DR Sbjct: 853 GERTYSGSRVTQAGRTHYTYDVQGRLAQKRVT----------TLSGKQLTWTFTWDAEDR 902 Query: 112 LTTIQNDR-TRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFP 170 LT +Q + Y +L + G + Sbjct: 903 LTQVQAPGDVAWRYFYD-----------------------ALGRRTAKHRLRADGRIEDV 939 Query: 171 PVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRG 230 +L + + + W + + Q + + R+ D G Sbjct: 940 TTYCWDGGQLAEQ----HTNGVTLIWDYTGLHPLAQREAKTQEQGESDRRFFAIVTDLAG 995 Query: 231 LPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEESGLYYNRHRYYDP 290 P L++ +G W + WG+ + + +R PGQ +D E+GL+YN +RYYDP Sbjct: 996 APTDLIAPDGTIAWHSRSTAWGSTQSHRDATAYT-PLRYPGQYFDPETGLHYNLNRYYDP 1054 Query: 291 LQGRYITQDPIGLKGGWNFYQYPLNPVQYIDSMGLASKYGHLNNGG 336 GRY T DP+GL N Y Y NP D +GLA GG Sbjct: 1055 ELGRYTTPDPLGLAPAVNHYTYVPNPFTLADPLGLAGCTADPTWGG 1100 Score = 98.3 bits (243), Expect = 5e-19, Method: Composition-based stats. Identities = 59/277 (21%), Positives = 85/277 (30%), Gaps = 39/277 (14%) Query: 2 WPDNRIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQY 61 + +R+ + Y YD GRL +K G + T + +D++ RL Sbjct: 857 YSGSRVTQAGRTHYTYDVQGRLAQKRVTTLSGK-----QLTWTFTWDAEDRLTQVQ---- 907 Query: 62 AEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTR 121 A V RY YD LGRR AK R + R VT Y WDG +L + Sbjct: 908 APGDVAWRYFYDALGRRTAKHRLRAD---------GRIEDVTTYCWDGGQLAEQHTNGVT 958 Query: 122 IQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLE 181 + Y PL + E T E ++ RR A +G + Sbjct: 959 LIWDYT--GLHPLAQREAKTQEQGESDRRFFAIVTDLAGAPTDLIAPDGTIAWHSRSTAW 1016 Query: 182 SEILA--DRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTE 239 + D + R+ + ++ Y P D GL A Sbjct: 1017 GSTQSHRDATAYTPLRYPGQYFDPETGLHYNLNRYYDP-ELGRYTTPDPLGLAPA----- 1070 Query: 240 GATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQYDE 276 Y NP L + L G D Sbjct: 1071 ---VNHYTYVP--------NPFTLADPLGLAGCTADP 1096 Score = 57.9 bits (138), Expect = 7e-07, Method: Composition-based stats. Identities = 44/265 (16%), Positives = 82/265 (30%), Gaps = 34/265 (12%) Query: 13 YLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYLY 72 + YD GR+T TD ++ T+RY YD+ R+V +T ++ S + Y Sbjct: 281 LRFTYDTLGRITSWTDR---------NDSTYRYIYDAAGRVV---QTVGPSGMLSSTFAY 328 Query: 73 DPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQPGSFT 132 D R T M T Y D + + D T Y + Sbjct: 329 D---------TTNRITRYTDSMGA-----TTVYQLDERQQIVAETDPLGHTTAYVFDARD 374 Query: 133 PLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFP-----PVLVQMLDRLESEILAD 187 ++ A G + +R + + + + PV + + D Sbjct: 375 RILEQTDALGHTVRFERDERGNLVGFVAPDGLRTTAVFNDLDLPVTITERGGRQRHFAYD 434 Query: 188 RVSEESRRWLASCGLTVEQMQNQMD--PVYTPARKIHLYHCDHRGLPLALVSTEGATEWC 245 + T ++ + V A ++ D GLP+ + + +GA Sbjct: 435 ARGNRTAVIDIDRARTDYEVDERGHVTAVRNAAGEVTRIRNDAAGLPVEITAPDGARVTL 494 Query: 246 AEYDEWGNLLNEENPHQLQQLIRLP 270 D +G + + + Sbjct: 495 VR-DRFGRVTEVTDALGGTMRMTWT 518 Score = 54.4 bits (129), Expect = 1e-05, Method: Composition-based stats. Identities = 45/254 (17%), Positives = 69/254 (27%), Gaps = 29/254 (11%) Query: 8 ARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVE 67 A+ + Y+YD GRLT +TD D RT Y +D+ RL T Sbjct: 592 AQGQQWRYQYDAAGRLTAETDF---------DGRTLTYEHDALGRLTRRTNAAGQS---- 638 Query: 68 SRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWD-------GDRLTTIQNDRT 120 Y D LGR V + + R +VT R+ T + Sbjct: 639 LAYERDLLGRIVRMQHDDGTTSTFTYDIAGRLVEVTNPHAQIHLERDLAGRVVTESVNGR 698 Query: 121 RIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRL 180 + Y R + R LA V + + LD Sbjct: 699 ALARAYDVLGRRTHRRTPSGATSTLTYDERGLAAYTVGEQTFRFERDVLGREVSRTLD-- 756 Query: 181 ESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEG 240 ++ + + R + + + YTP H G + Sbjct: 757 -DQLTFSQTWDPVGRIVNQAFTSAHDTLFERSFAYTPNGTPHTIEDSRTGRRTYTLDAAS 815 Query: 241 ATE------WCAEY 248 W +Y Sbjct: 816 RITAVTAEGWSEQY 829 Score = 47.5 bits (111), Expect = 0.001, Method: Composition-based stats. Identities = 36/231 (15%), Positives = 72/231 (31%), Gaps = 25/231 (10%) Query: 45 YHYDSQHRLVHYTRTQYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTW 104 + YD L + + R+ YD LGR +T W + Sbjct: 262 FGYDEDGDLTEVINSSG----IPLRFTYDTLGR------------ITSWTDRNDSTYRYI 305 Query: 105 YGWDGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDG 164 Y G R+ + + + + + R + G Q + ++ Sbjct: 306 YDAAG-RVVQTVGPSGMLSSTFAYDTTNRITRYTDSMGATTVYQLDERQQIVAETDPLGH 364 Query: 165 GSVVFPPVLVQMLDRLESEILADRVSEESR----RWLASCGLTVEQMQNQMD---PVYTP 217 + ++L++ ++ R + R ++A GL + N +D + Sbjct: 365 TTAYVFDARDRILEQTDALGHTVRFERDERGNLVGFVAPDGLRTTAVFNDLDLPVTITER 424 Query: 218 ARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIR 268 + + D RG A++ + E DE G++ N IR Sbjct: 425 GGRQRHFAYDARGNRTAVIDID-RARTDYEVDERGHVTAVRNAAGEVTRIR 474 Score = 47.5 bits (111), Expect = 0.001, Method: Composition-based stats. Identities = 47/283 (16%), Positives = 71/283 (25%), Gaps = 43/283 (15%) Query: 12 HYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQY---------- 61 Y +D R+ E+TD + T R+ D + LV + Sbjct: 365 TTAYVFDARDRILEQTDAL---------GHTVRFERDERGNLVGFVAPDGLRTTAVFNDL 415 Query: 62 -------AEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSR-------KPQVTWYGW 107 + + YD G R A R R +VT Sbjct: 416 DLPVTITERGGRQRHFAYDARGNRTAVIDIDRARTDYEVDERGHVTAVRNAAGEVTRIRN 475 Query: 108 DGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQ--------RRSLADTLQQS 159 D L + F + V A G + R L D ++ Sbjct: 476 DAAGLPVEITAPDGARVTLVRDRFGRVTEVTDALGGTMRMTWTIEGRPLWRELPDGTREE 535 Query: 160 GGEDGGSVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPAR 219 DG + + DR + A+ T + V + Sbjct: 536 WTWDGEGNLLAHTDRAGHTTTHAVTHFDRRTATRTADGAAYQFTHDSELRLATVVNAQGQ 595 Query: 220 KIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQ 262 + Y D G A +G T E+D G L N Sbjct: 596 QWR-YQYDAAGRLTAETDFDGRTL-TYEHDALGRLTRRTNAAG 636 >UniRef50_A9FBU5 Conserved carbohydrate-binding protein, Rhs family n=2 Tax=Proteobacteria RepID=A9FBU5_SORC5 Length = 1300 Score = 176 bits (445), Expect = 2e-42, Method: Composition-based stats. Identities = 102/441 (23%), Positives = 150/441 (34%), Gaps = 81/441 (18%) Query: 7 IARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDD--------------------------- 39 + A YD GRL+E+ + +R D Sbjct: 793 LKGGARIDMAYDALGRLSERRIVSSTSGVRGRDLSVQPAWVGRLPPGTVHAEWRRYTPAG 852 Query: 40 ---------ERTHRYHYDSQHRLVHYTRTQYAEPLVESRYLYDPLGRRVAKRVWRRERDL 90 +Y YD +L R + + YD G + Sbjct: 853 LLEEHWSARGGVTQYGYDPAGQLAGVRR----HGGEVASFRYDLAGN-LHDATPGAPPRS 907 Query: 91 TGWMSLSRKPQVTWYGWDGD-RLTTIQNDRTRIQ---TIYQPGSFTPLIRVETATGELAK 146 ++ T Y WD D RL T + RT + T Y + L RVE GE+ Sbjct: 908 YAVGGRIQRAGDTEYTWDEDGRLVTKRIRRTAGEEELTRYLWSASGMLARVERPDGEIVA 967 Query: 147 TQR----RSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADR-------VSEESRR 195 + R +A L + +V V L EI V E + Sbjct: 968 FEYDPFGRRVAKRLLARTADGSERLVEATRFVWDGGALVHEIRRKTDAGGDPIVDERTYV 1027 Query: 196 WLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLL 255 + + V + + Y D G P LV +G D WG+ Sbjct: 1028 FEHDRTVPVAHREARAQGGARTVSAWWHYLTDDSGAPEMLVGPDGQIGCELARDPWGSAT 1087 Query: 256 NEENPHQLQQLIRLPGQQYDEESGLYYNRHRYYDPLQGRYITQDPIGLKGGWNFYQYPLN 315 + E Q +R GQ DEE+GL YNR+RYYDP GRYI+ DP+G++GG N + Y N Sbjct: 1088 SAEGA-QTSTPLRFRGQYADEETGLSYNRYRYYDPELGRYISADPLGIEGGLNVFAYAAN 1146 Query: 316 -PVQYIDSMGLA-----SKYGHLNNGG------------YGARPNKPPTPDPSKLPDIAK 357 P +D GL + G++ G + A PN P + S L ++A Sbjct: 1147 CPTSAVDVEGLMYSIIKDRAGNIVADGHSQDTGRPLPASHSAVPNGKPCAERSALTNLAH 1206 Query: 358 QLRLPYPIDQASSAPNVFKTF 378 +L + +V + F Sbjct: 1207 RLGPGA------TKADVARMF 1221 Score = 66.4 bits (160), Expect = 2e-09, Method: Composition-based stats. Identities = 61/367 (16%), Positives = 103/367 (28%), Gaps = 74/367 (20%) Query: 14 LYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYLYD 73 Y YD GRL E D D RY YD+ HRL T + + YD Sbjct: 274 RYAYDAGGRLVEAADA---------DGYVTRYEYDASHRLTSIT----GPTGLMFSFRYD 320 Query: 74 PLGR----------------------RVAKRVWRRERDLTGWMSLSRKPQ------VTWY 105 GR +A V R L + S V + Sbjct: 321 DQGRCVETWGEYLGKADPSLTDDVPEMLADHVTRARGILHTKLEYSGDGYSEAVDSVALH 380 Query: 106 GWDGDRLTTIQNDRTRIQTI-YQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDG 164 + G+ + T + L G +R ++ + Sbjct: 381 RYFGNAHGLVDKAVTPLGVFGRTYDKRGFLASFTDPLGARTTWKRDAMGRETEVVDPLGR 440 Query: 165 GSVVF---PPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYT--PAR 219 +V+ + ++ DR + + + + P+ P Sbjct: 441 RTVIERDASGEITAVIGPDGETTRVDRAGDSLFWTDPIGAVCSARFDARGLPIEVRWPDG 500 Query: 220 KIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEESG 279 + ++ D +G + + GA A YD WG + + + +G Sbjct: 501 RTLVFRRDVQGNVIEHIDQAGAQT-RARYDAWGRCVELWDARGGRTAFTYS-------TG 552 Query: 280 LYYNRHRYYDPLQGRYITQDPIGLKGGWNFYQY--PLNPVQYIDSMGLASK--YGHLNNG 335 GR ++ I G Y+Y N + + G ++ YG L+ Sbjct: 553 -------------GRVLSV--ISPDGSVERYEYDGAGNLISLTEPDGQTTRITYGGLHKP 597 Query: 336 GYGARPN 342 RPN Sbjct: 598 VRVERPN 604 Score = 45.2 bits (105), Expect = 0.005, Method: Composition-based stats. Identities = 52/323 (16%), Positives = 89/323 (27%), Gaps = 71/323 (21%) Query: 2 WPDNRI----------------ARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRY 45 WPD R A RYD GR E D + Sbjct: 497 WPDGRTLVFRRDVQGNVIEHIDQAGAQTRARYDAWGRCVELWDAR---------GGRTAF 547 Query: 46 HYDSQHRLVHYTRTQYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTW- 104 Y + R++ + RY YD G ++ + + L + +V Sbjct: 548 TYSTGGRVLSVISPDGS----VERYEYDGAGNLISLTEPDGQTTRITYGGLHKPVRVERP 603 Query: 105 --------YGWDGDRLTTIQNDRTRIQT--------------------IYQPGSFTPLIR 136 Y +G L + N R + + Y + ++ Sbjct: 604 NGEVTELKYNREGW-LMRVTNGRGEVHSYERNLAGLVIAERTFDGRVLRYGYDAMGRVVW 662 Query: 137 VETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSEESRRW 196 E G+ ++ +R LA + + +DG F + E+ + W Sbjct: 663 SENGLGQRSE-YKRDLAGQMTRRIFDDGTEESFEYNGRGEIIFAENAAGRFAFDRNEKGW 721 Query: 197 LASCGLTVEQMQNQMDPVY-----TPARKIHLYHC-----DHRGLPLALVSTEGATEWCA 246 + + V + Y AR+ L H D +AL +G E + Sbjct: 722 IVAETQEVAGAPVTVQTEYRITGEVAARRTSLGHTAQWSHDFARQQVALF-LDGQAEAVS 780 Query: 247 EYDEWGNLLNEENPHQLQQLIRL 269 D WG L + + Sbjct: 781 TRDPWGRELTRSLKGGARIDMAY 803 >UniRef50_A9AKU8 Type VI secretion system Vgr family protein n=10 Tax=Burkholderia RepID=A9AKU8_BURM1 Length = 1981 Score = 175 bits (444), Expect = 2e-42, Method: Composition-based stats. Identities = 83/338 (24%), Positives = 118/338 (34%), Gaps = 40/338 (11%) Query: 12 HYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQY---------- 61 YRYD RLT+ +HYD L+ ++ Sbjct: 1518 QKAYRYDALSRLTQVMAASGPEA----------FHYDPAGNLLAAAPSRDNMQAWKASGD 1567 Query: 62 --------AEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLT 113 P + YD G R+A+ V + + + LT Sbjct: 1568 RLLRFAPQTRPDRPVDFTYDGHGNRIARTVPLPPKPALTEAEKRSQRGTDNLLRVMEVLT 1627 Query: 114 TIQNDRTRIQ----TIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVF 169 + T Y+ LI +E A G ++ + +L + + GG+ Sbjct: 1628 GTPKYEEPSEVPEVTRYRYDGSHQLIAIEHADGARSEYEYDALGRRVAKHHTPAGGA-QQ 1686 Query: 170 PPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHR 229 + + D + E+ R S E R V ++ + Y DH Sbjct: 1687 TTLFMWDGDWMMQEVRTGRTSHEDRAVTY-----VPHPDHEGPLTRLADGQAWHYVTDHL 1741 Query: 230 GLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEESGLYYNRHRYYD 289 G P L + W A+ +G + IR PGQ DEESGL+YNR RYYD Sbjct: 1742 GTPQELYDEQREVLWAADLSAYGRTA-RWLTRVVDNPIRFPGQYRDEESGLHYNRFRYYD 1800 Query: 290 PLQGRYITQDPIGLKGGWNFYQYPLN-PVQYIDSMGLA 326 P+ GRYI QDPI GG NFY Y + P D GL Sbjct: 1801 PMVGRYINQDPIAFDGGINFYSYADSAPNIAYDPKGLF 1838 Score = 71.4 bits (173), Expect = 7e-11, Method: Composition-based stats. Identities = 48/280 (17%), Positives = 70/280 (25%), Gaps = 63/280 (22%) Query: 6 RIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDER------------------------ 41 + D + YD HG +T +P T+ E+ Sbjct: 1575 QTRPDRPVDFTYDGHGNRIARTVPLPPKPALTEAEKRSQRGTDNLLRVMEVLTGTPKYEE 1634 Query: 42 ------THRYHYDSQHRLVHYTRTQYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMS 95 RY YD H+L+ A S Y YD LGRRVAK Sbjct: 1635 PSEVPEVTRYRYDGSHQLIAIEHADGA----RSEYEYDALGRRVAKHHTPA--------- 1681 Query: 96 LSRKPQVTWYGWDGDRLTTIQNDRTRIQ------TIYQPGSFTPLIR---------VETA 140 Q T + WDGD + + P PL R V Sbjct: 1682 -GGAQQTTLFMWDGDWMMQEVRTGRTSHEDRAVTYVPHPDHEGPLTRLADGQAWHYVTDH 1740 Query: 141 TGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSEESRRWLASC 200 G + G + + +V R + + R+ Sbjct: 1741 LGTPQELYDEQREVLWAADLSAYGRTARWLTRVVDNPIRFPGQYRDEESGLHYNRFRYYD 1800 Query: 201 GLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEG 240 + DP+ + D P +G Sbjct: 1801 PMV--GRYINQDPIAFDGGINFYSYADS--APNIAYDPKG 1836 Score = 62.1 bits (149), Expect = 5e-08, Method: Composition-based stats. Identities = 49/287 (17%), Positives = 75/287 (26%), Gaps = 37/287 (12%) Query: 5 NRIARDAHYL-----YRYDRHGRLTEKTDLIPEGVI---------------RTDDERTHR 44 NR+ + YRY+ G L E+ D +G I R+ D Sbjct: 1297 NRLIEQTGFDGRRQSYRYNAAGELVERIDHGQDGQIATHVTYDVLGRPVERRSSDGSQAS 1356 Query: 45 YHYDSQHRLVHYTRTQYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTW 104 Y YD + L V Y YD GRR A+ R + W Sbjct: 1357 YRYDERGLLTQAQAIVPGRAPVHVTYEYDAAGRRTAEVQAHHGRVWRLTHGVDAIGNRDW 1416 Query: 105 YGWDGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDG 164 T + + + + Y G ++ E + Q Sbjct: 1417 --------THVPDIGSLVWQRYGSGHVHGILLDEHPLASFERDALHREIRRTQGPASHHF 1468 Query: 165 GSVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLY 224 G + V L+ + R W + + + R Y Sbjct: 1469 GYGANGLLAVHRWQNLDERGRSLEHPRPWRAWAYDDAGQLTTLDD-------AWRDQKAY 1521 Query: 225 HCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRLPG 271 D +++ G YD GNLL Q + G Sbjct: 1522 RYDALSRLTQVMAASGPEA--FHYDPAGNLLAAAPSRDNMQAWKASG 1566 Score = 57.5 bits (137), Expect = 1e-06, Method: Composition-based stats. Identities = 54/272 (19%), Positives = 77/272 (28%), Gaps = 42/272 (15%) Query: 15 YRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESR----- 69 Y YD HG L E TD + T RY YD+ H L Y A + E Sbjct: 945 YVYDEHGDLVEATDR---------ENLTWRYGYDN-HLLTTYRTPAGATHVSEWSDDTPN 994 Query: 70 ------YLYD--PLGRRVAKRVWRRER--DLTGWMSLSRKPQVTWYGWDG-DRLTTIQND 118 Y Y G+RV R R + L T Y ++G + I + Sbjct: 995 AYCLRTYAYTEGADGQRVVTREMRFDYLPSLRATRVTDGLGHTTEYHYNGLWAVEKIVHP 1054 Query: 119 RTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLD 178 ++ + F V T L +T R + D V + Sbjct: 1055 DGSVEQTH----FDETGSVAGYTDALGRTTRIVNDARGNPTSIIDPAGNVTRISYGE--H 1108 Query: 179 RLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALV-S 237 L +I R + A LT E Y + + D G + Sbjct: 1109 NLPEQITDPAGQIWQRGYDAHGHLTSETDPLGNVTRYAYENGLPVARTDALGNVTKMQWD 1168 Query: 238 TEGATEWC---------AEYDEWGNLLNEENP 260 G +YD +G L + Sbjct: 1169 DAGQLVARTDCSGHTTTYDYDPFGQLTETTDA 1200 Score = 52.1 bits (123), Expect = 5e-05, Method: Composition-based stats. Identities = 40/256 (15%), Positives = 65/256 (25%), Gaps = 41/256 (16%) Query: 37 TDDERTHRYHYDSQHRLVHYTRTQYAE--PLVESRYLYDPLGRRVAKRVWRRERDLTGWM 94 ++ T R D R+ Q PL + Y+YD G V Sbjct: 910 RNNVHTVRCALDDAGRITSVLLDQGVGNQPLHLTSYVYDEHGDLVE-------------- 955 Query: 95 SLSRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLAD 154 + R+ YG+D LTT + + T +R + Sbjct: 956 ATDRENLTWRYGYDNHLLTTYRTPAGATHVSEWSDDTPNAYCLRTYAYTEGADGQRVVTR 1015 Query: 155 TLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPV 214 ++ + L E E+ S T + Sbjct: 1016 EMRFDYLPSLRATRVTDGLGHTT---EYHYNGLWAVEKIVHPDGSVEQTHFDETGSVAGY 1072 Query: 215 YTPARKIHLYHCDHRGLPLALVSTEGAT--------------------EWCAEYDEWGNL 254 + D RG P +++ G W YD G+L Sbjct: 1073 TDALGRTTRIVNDARGNPTSIIDPAGNVTRISYGEHNLPEQITDPAGQIWQRGYDAHGHL 1132 Query: 255 LNEENPHQLQQLIRLP 270 +E +P L + R Sbjct: 1133 TSETDP--LGNVTRYA 1146 Score = 51.3 bits (121), Expect = 7e-05, Method: Composition-based stats. Identities = 32/187 (17%), Positives = 53/187 (28%), Gaps = 15/187 (8%) Query: 16 RYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYLYDPL 75 YD GR TD + ER R +D + + YD + Sbjct: 1229 EYDEAGRAIAHTDPL---------ERVTRVDWDGYGQRTQIVDPAGGTQQ----FRYDAI 1275 Query: 76 GRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQPGSFTPLI 135 GR +E + S +R + T + DG R + N + G + Sbjct: 1276 GRLTKLTNANQETTTFRYDSRNRLIEQTGF--DGRRQSYRYNAAGELVERIDHGQDGQIA 1333 Query: 136 RVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSEESRR 195 T +RRS + ++ G + +V + D + Sbjct: 1334 THVTYDVLGRPVERRSSDGSQASYRYDERGLLTQAQAIVPGRAPVHVTYEYDAAGRRTAE 1393 Query: 196 WLASCGL 202 A G Sbjct: 1394 VQAHHGR 1400 Score = 49.4 bits (116), Expect = 3e-04, Method: Composition-based stats. Identities = 53/284 (18%), Positives = 83/284 (29%), Gaps = 57/284 (20%) Query: 16 RYDRHGRLTEKTDLIPE----------GVIRTDD-ERTHRYHYDSQHRLVHYTRTQYAEP 64 YD HG LT +TD + V RTD + +D +LV T Sbjct: 1125 GYDAHGHLTSETDPLGNVTRYAYENGLPVARTDALGNVTKMQWDDAGQLVARTDCSGH-- 1182 Query: 65 LVESRYLYDPLG---------------------RRVAKRVWRRERDLTGWMSLSRK---- 99 + Y YDP G R A + + R Sbjct: 1183 --TTTYDYDPFGQLTETTDALGQVSHHSGSVSARVTAVQPAGMGWWKVEYDEAGRAIAHT 1240 Query: 100 ---PQVTWYGWDGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTL 156 +VT WDG T D ++ + L ++ A E + S + Sbjct: 1241 DPLERVTRVDWDGYGQRTQIVDPAGGTQQFRYDAIGRLTKLTNANQETTTFRYDSRNRLI 1300 Query: 157 QQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYT 216 +Q+G + ++++R++ + + G VE+ + Sbjct: 1301 EQTGFDGRRQSYRYNAAGELVERIDHGQDGQIATHVT---YDVLGRPVERRSSDGSQAS- 1356 Query: 217 PARKIHLYHCDHRGL---PLALVSTEGATEWCAEYDEWGNLLNE 257 Y D RGL A+V EYD G E Sbjct: 1357 -------YRYDERGLLTQAQAIVPGRAPVHVTYEYDAAGRRTAE 1393 >UniRef50_B4B5R8 YD repeat protein n=1 Tax=Cyanothece sp. PCC 7822 RepID=B4B5R8_9CHRO Length = 7225 Score = 175 bits (444), Expect = 2e-42, Method: Composition-based stats. Identities = 76/317 (23%), Positives = 122/317 (38%), Gaps = 29/317 (9%) Query: 25 EKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVE-SRYLYDPLGRRVAKRV 83 E++ + I +D YDS RL A L+E Y YD G+R+ K Sbjct: 6688 ERSGIGEPTKIIREDGSYTLLAYDSALRLTQEAYYDGAGTLLEKMSYSYDESGKRITKID 6747 Query: 84 WRRERDL-----TGWMSLSRKPQVTWYGWDGD-RLTTIQNDRTRIQTIYQPGSFTPLIRV 137 + S++ + Y +D + RLT + D + + F L V Sbjct: 6748 KAGNHNYNYQSDYQLTSITEASETEAYTYDNNGRLTLVSRDGQTLDLNHDV--FDHLTEV 6805 Query: 138 ETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLES-EILADRVSEESRRW 196 E T T + ++ +G +V V M LES ++L+D + Sbjct: 6806 ENQTT--GTTLEYTYDGEGRRISAIEGSTVRQFLVAPAMGGGLESTDLLSDEQGNLLANY 6863 Query: 197 LASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLN 256 + + ++ +P+ Y D G + L + G YD +GN+ Sbjct: 6864 IYAGNTPFMRLDANGNPI--------YYLTDGIGSVIGLANATGQNIGKFVYDSFGNIRV 6915 Query: 257 EE----NPHQLQQLIRLPGQQYDEESGLYYNRHRYYDPLQGRYITQDPIGL----KGGWN 308 NP + R GQ + E+GLYY R R YDP GR++++DP+ + +N Sbjct: 6916 ASGSGINPAKTGGDFRFQGQWLESETGLYYLRARDYDPKTGRFLSRDPVDIIETEPESFN 6975 Query: 309 FYQYP-LNPVQYIDSMG 324 YQ+ NP Y D G Sbjct: 6976 AYQFAYNNPQIYSDPTG 6992 Score = 66.0 bits (159), Expect = 3e-09, Method: Composition-based stats. Identities = 47/270 (17%), Positives = 82/270 (30%), Gaps = 28/270 (10%) Query: 15 YRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYLYDP 74 Y YD G + KT + RY YDS +L + A ++ YD Sbjct: 6104 YTYDAQGNILTKT---------APNGELVRYAYDSYGQLTQLNLSTGAS----FKWDYDR 6150 Query: 75 LGRRVA------KRVWRRERDLTG-WMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQ 127 G ++ K + D +G +S ++Y +D Q D T + Sbjct: 6151 RGNLLSIKDGDGKVINFYTYDNSGRVISEGDSFGTSFYTYDNLGNLIEQKDPNGKITKME 6210 Query: 128 PGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILAD 187 + LI++ G +A GE + E + Sbjct: 6211 YNTAGNLIKMIDPDGRVATFSYDKQGRKTNADYGEGISVNYSYTGSLNEWTTAEGPTIGK 6270 Query: 188 RVSEES-----RRWLASCGLTVEQMQNQMD---PVYTPARKIHLYHCDHRGLPLALVSTE 239 + + W+A G T+ + P+ KI Y D G + + + Sbjct: 6271 IERKLTSNGKLAGWVAPDGSTLTYEYDAAGRLTKETDPSGKITEYTYDAAGRLIKIKNAT 6330 Query: 240 GATEWCAEYDEWGNLLNEENPHQLQQLIRL 269 +YD+ G ++ E +P Sbjct: 6331 TGATVTRDYDKVGRVIKEIDPFGNATTYTY 6360 Score = 64.8 bits (156), Expect = 7e-09, Method: Composition-based stats. Identities = 69/426 (16%), Positives = 120/426 (28%), Gaps = 92/426 (21%) Query: 12 HYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRY---------------HYDSQHRLVHY 56 Y+YD G L TD D+R Y Y+ + RLV Sbjct: 5972 KIQYQYDAKGDLIAITDRENNKTEFVYDDRQPHYLEEVIDPLDRNGAKAQYNDEGRLVKL 6031 Query: 57 TRTQYAEPLVE-----------------SRYLYDPLGRRV---------AKRVWRRERDL 90 +T + Y YD G + ++ + + +L Sbjct: 6032 IKTDGNAVEWVYDPDNFLQTVKDGLGNPTTYEYDERGNVITIIDPLGNISQFTYDDKNNL 6091 Query: 91 TGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRR 150 T + Y G+ LT + ++ Y S+ L ++ +TG K Sbjct: 6092 TSETDPLGNETIYTYDAQGNILTKTAPNGELVRYAYD--SYGQLTQLNLSTGASFKWDYD 6149 Query: 151 SLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQ 210 + L +DG V R+ SE + S + L + Q Sbjct: 6150 RRGNLL---SIKDGDGKVINFYTYDNSGRVISEGDSFGTSFYTYDNLG-------NLIEQ 6199 Query: 211 MDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRLP 270 DP + + + G + ++ +G YD+ G N + + Sbjct: 6200 KDPNGKITKMEY----NTAGNLIKMIDPDGRVA-TFSYDKQGRKTNADYGEGISVNYSYT 6254 Query: 271 G--QQYDEESGLYYNRHRYYDPLQGR-------------YITQDPIGLKGGWNFYQY--P 313 G ++ G P G+ ++ D G Y+Y Sbjct: 6255 GSLNEWTTAEG----------PTIGKIERKLTSNGKLAGWVAPD-----GSTLTYEYDAA 6299 Query: 314 LNPVQYIDSMGLASKYGHLNNGGYGARPNKPPTPDPSKLPDIAKQLRLPYPIDQASSAPN 373 + D G ++Y + G N T + D K R+ ID +A Sbjct: 6300 GRLTKETDPSGKITEYTYDAAGRLIKIKN--ATTGATVTRDYDKVGRVIKEIDPFGNATT 6357 Query: 374 VFKTFF 379 + Sbjct: 6358 YTYVPY 6363 Score = 60.2 bits (144), Expect = 2e-07, Method: Composition-based stats. Identities = 51/309 (16%), Positives = 90/309 (29%), Gaps = 85/309 (27%) Query: 7 IARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLV 66 ++ A + + YDR G L D D + + Y YD+ R++ + Sbjct: 6138 LSTGASFKWDYDRRGNLLSIKDG--------DGKVINFYTYDNSGRVISE-----GDSFG 6184 Query: 67 ESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTIY 126 S Y YD LG + ++ + + + ++ DG R+ T D+ +T Sbjct: 6185 TSFYTYDNLGNLIEQKDPNGKITKMEYNTAGNLIKMI--DPDG-RVATFSYDKQGRKTNA 6241 Query: 127 QPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILA 186 G + + + G + + ++E ++ + Sbjct: 6242 DYG------------------------EGISVNYSYTGSLNEWTTAEGPTIGKIERKLTS 6277 Query: 187 DRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWCA 246 + + W+A G T+ Y D G G Sbjct: 6278 NG---KLAGWVAPDGSTLT------------------YEYDAAGRLTKETDPSGKIT-EY 6315 Query: 247 EYDEWGNLLNEENPHQLQQLIRLPGQQYDEESGLYYNRHRYYDPLQGRYITQ-DPIGLKG 305 YD G L+ +N + R YD GR I + DP G Sbjct: 6316 TYDAAGRLIKIKNATTGATVT------------------RDYD-KVGRVIKEIDPFGNA- 6355 Query: 306 GWNFYQYPL 314 Y Y Sbjct: 6356 --TTYTYVP 6362 Score = 56.7 bits (135), Expect = 2e-06, Method: Composition-based stats. Identities = 54/336 (16%), Positives = 95/336 (28%), Gaps = 60/336 (17%) Query: 11 AHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRY 70 + D GR+T D + + +Y YD++ L+ T + + Sbjct: 5950 QQITFERDSKGRITAVIDPLGNKI---------QYQYDAKGDLIAITDRENNKTEFVYDD 6000 Query: 71 L---Y-----DPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRI 122 Y DPL R AK + E L + Y D D Sbjct: 6001 RQPHYLEEVIDPLDRNGAKAQYNDEGRLVKLIKTDGNAVEWVYDPDN--FLQTVKDGLGN 6058 Query: 123 QTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLES 182 T Y+ +I + G +++ + ++ ++ +L + Sbjct: 6059 PTTYEYDERGNVITIIDPLGNISQFTYDDKNNLTSETDPLGNETIYTYDAQGNILTKTAP 6118 Query: 183 EILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGAT 242 R + +S L L+ D RG L++ +G Sbjct: 6119 NGELVRYAYDSYGQLTQLNLSTGASFKWD--------------YDRRGNLLSIKDGDGKV 6164 Query: 243 EWCAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEESGLYYNRHRYYDPLQGRYITQ-DPI 301 YD G +++E + YD G I Q DP Sbjct: 6165 INFYTYDNSGRVISEGDSFGTSF---YT-----------------YD-NLGNLIEQKDP- 6202 Query: 302 GLKGGWNFYQY--PLNPVQYIDSMGLASKYGHLNNG 335 G +Y N ++ ID G + + + G Sbjct: 6203 --NGKITKMEYNTAGNLIKMIDPDGRVATFSYDKQG 6236 Score = 56.3 bits (134), Expect = 2e-06, Method: Composition-based stats. Identities = 42/254 (16%), Positives = 71/254 (27%), Gaps = 33/254 (12%) Query: 4 DNRIARD-----AHYLYRYDRHGRLTEKTDLIPEGV-----------IRTDDERTHRYHY 47 DNR+ + Y+YD G +T + E + + T YHY Sbjct: 6515 DNRLVKVTLPNGETLTYQYDEAGNVTSQVISTGETIETTYTTSGSIATSKNAAGTITYHY 6574 Query: 48 DSQHRLVHYTRTQYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGW 107 D+ L + Y D LG RV K +T + T Y + Sbjct: 6575 DTNGNLQGIEYPNGSSIF----YERDVLG-RVTKITETASGSITAAL--------TRYTY 6621 Query: 108 DGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSV 167 D D T T L+ G + + G+V Sbjct: 6622 DEVGNLKTITDPTGGVTTMTYDQINRLVERILPNGVKTTYTYNTQDHVISIVHKNTDGTV 6681 Query: 168 VFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCD 227 + + ++I+ + S + ++ LT E + + Y D Sbjct: 6682 LASVTYERSGIGEPTKIIREDGSYTLLAYDSALRLTQEAYYDGAGTLLEKMS----YSYD 6737 Query: 228 HRGLPLALVSTEGA 241 G + + G Sbjct: 6738 ESGKRITKIDKAGN 6751 Score = 54.8 bits (130), Expect = 8e-06, Method: Composition-based stats. Identities = 43/261 (16%), Positives = 80/261 (30%), Gaps = 36/261 (13%) Query: 9 RDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVES 68 + Y YD GRLT++TD + Y YD+ RL+ + Sbjct: 6288 DGSTLTYEYDAAGRLTKETD---------PSGKITEYTYDAAGRLIKIKNATTGATVTR- 6337 Query: 69 RYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQP 128 YD +GR + +E D G + Y D + ++ + + T Sbjct: 6338 --DYDKVGRVI------KEIDPFGNAT------TYTYVPYEDEIASVTDAKGNTWTYDYT 6383 Query: 129 GSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADR 188 + T + L K+ +T G + + L + Sbjct: 6384 ETTTTVTDPLGRKTTLVKSPYFLPIETRYSDGKKQSIEYLLNNSLQE---AENYPTRFVD 6440 Query: 189 VSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWCAEY 248 + R + ++ + + +YT + Y D ++S G T Y Sbjct: 6441 IGGNDRAFTYDSFGRLKTATDLGNAIYT-----YAYSDDGL---TQIISPTGETR-KYSY 6491 Query: 249 DEWGNLLNEENPHQLQQLIRL 269 D+ GNL + + + Sbjct: 6492 DDLGNLKTITYDNNTVKQLEY 6512 Score = 49.0 bits (115), Expect = 4e-04, Method: Composition-based stats. Identities = 45/263 (17%), Positives = 71/263 (26%), Gaps = 70/263 (26%) Query: 12 HYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESR-Y 70 + YD GRL TDL + Y Y TQ P E+R Y Sbjct: 6445 DRAFTYDSFGRLKTATDL---------GNAIYTYAYSDDG------LTQIISPTGETRKY 6489 Query: 71 LYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQPGS 130 YD LG L TI D ++ + + G+ Sbjct: 6490 SYDDLGN----------------------------------LKTITYDNNTVKQL-EYGN 6514 Query: 131 FTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVS 190 L++V GE Q G V+ ++ I + + Sbjct: 6515 DNRLVKVTLPNGETLTYQYD--------EAGNVTSQVISTGETIETTYTTSGSIATSKNA 6566 Query: 191 EESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALV-STEGATEW---CA 246 + + ++ ++ P Y D G + + G+ Sbjct: 6567 AGTITYHYDTNGNLQGIEY-------PNGSSIFYERDVLGRVTKITETASGSITAALTRY 6619 Query: 247 EYDEWGNLLNEENPHQLQQLIRL 269 YDE GNL +P + Sbjct: 6620 TYDEVGNLKTITDPTGGVTTMTY 6642 Score = 47.9 bits (112), Expect = 8e-04, Method: Composition-based stats. Identities = 29/155 (18%), Positives = 44/155 (28%), Gaps = 36/155 (23%) Query: 11 AHYLYRYDRHGRLTEKTDLIPEGVIR----------TDDERTHRYHYDSQHRLVHYTRT- 59 Y YD G+ K D T+ T Y YD+ RL +R Sbjct: 6730 EKMSYSYDESGKRITKIDKAGNHNYNYQSDYQLTSITEASETEAYTYDNNGRLTLVSRDG 6789 Query: 60 ----------------QYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVT 103 + Y YD GRR++ R ++ + T Sbjct: 6790 QTLDLNHDVFDHLTEVENQTTGTTLEYTYDGEGRRISAIEGSTVRQFLVAPAMGGGLEST 6849 Query: 104 WYGWDGDRLTTIQNDRTRIQTIYQPGSFTPLIRVE 138 D L+ Q + Y TP +R++ Sbjct: 6850 ------DLLSDEQGNLLA---NYIYAGNTPFMRLD 6875 >UniRef50_D2TGW0 Putative Rhs protein n=2 Tax=Citrobacter RepID=D2TGW0_CITRO Length = 1477 Score = 175 bits (444), Expect = 3e-42, Method: Composition-based stats. Identities = 82/377 (21%), Positives = 126/377 (33%), Gaps = 70/377 (18%) Query: 14 LYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVE------ 67 + YD++ + + + E + +R R+ + Sbjct: 1053 RFTYDKNLNIARRQTWMNEVMESETHQRQQH------GRVTSRKYRVWRHTTSRINPDSG 1106 Query: 68 ---------------SRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDG-DR 111 + + YD GR V KRV + +P Y WD + Sbjct: 1107 MPEEGKFVRVIRDERTTWKYDVNGRLVEKRVGKS----------GYRPLTWRYRWDARSQ 1156 Query: 112 LTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPP 171 LT ++ + Y+ F RR + + G F Sbjct: 1157 LTGLETPEGE-RWEYKYDPFG----------------RRISKRCINRDKPGAG----FHW 1195 Query: 172 VLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGL 231 Q+ + + + + RW+ G + + ++H D G Sbjct: 1196 NGDQLTEEIPAGTEGKPEYRNAIRWIYEPGSFPPLARYE-------KGRLHYVITDITGR 1248 Query: 232 PLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEESGLYYNRHRYYDPL 291 L++ +G W E WG +R PGQ DEESGLYYNR RYYD Sbjct: 1249 IQELLTEDGTIVWRGEQQLWGREEGRNRDDAPACRLRFPGQYEDEESGLYYNRFRYYDCE 1308 Query: 292 QGRYITQDPIGLKGGWNFYQYPLNPVQYIDSMGLA----SKYGHLNNGGYGARPNKPPTP 347 G+Y+ DP+GL GG N Y Y NP++YID +GL L G GA N P Sbjct: 1309 AGQYLCADPVGLAGGLNPYGYVNNPLKYIDPLGLNPLALPAPTSLEPWGTGATLNSIQIP 1368 Query: 348 DPSKLPDIAKQLRLPYP 364 + ++A P Sbjct: 1369 KGGIIVEMAMSPGQSTP 1385 Score = 53.7 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 49/290 (16%), Positives = 81/290 (27%), Gaps = 45/290 (15%) Query: 18 DRHGRLTEKTDLIPEGVIR--TDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYLYDPL 75 D GR + + ++R T ++ YD+ HRL T E D L Sbjct: 642 DPQGRRQQFSYSEHGDLLRQIMPGGVTWQWDYDALHRLRETTAPDGGVTQTEQ----DML 697 Query: 76 GRRVAKRVWRRERDLTGWMSLSRKPQ---VTWYGWDGDR---------LTTIQNDRTRIQ 123 GR ++ + PQ + DG R L D Sbjct: 698 GRLLSVQDPLGFTTQFRHSKHHAGPQGSVEEIHRPDGVRELMRQNSEKLPESVTDGEGRT 757 Query: 124 TIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESE 183 T Y+ G+F L + GE + + L + E + Q++ + Sbjct: 758 TRYEYGAFDLLTAIIRPDGERLECRYDKLTRLTEIINAEGESYRLTYDKAGQLVAETDFT 817 Query: 184 ILADRVSEES----------------RRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCD 227 S ++ RR+ + +T E++ D Sbjct: 818 GRTLTYSYDAAGRCIRTTFPDGTRLNRRYNVTDQVTDEEVTQGDSDRVLSRTTFRY---D 874 Query: 228 HRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEE 277 + + + EYD G L E R +YD E Sbjct: 875 TLCRLVEAKNDDATVT--LEYDSAGRLTAET------LNGRRTEYRYDAE 916 Score = 49.8 bits (117), Expect = 2e-04, Method: Composition-based stats. Identities = 78/459 (16%), Positives = 140/459 (30%), Gaps = 59/459 (12%) Query: 17 YDRHGRLTE--KTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYLYDP 74 +D +G + +TD + IR D T + Q +L+H T + + + YD Sbjct: 409 HDSYGNRADFHRTDDLL-TEIRHSDGYTLALAW-QQQQLMHIDLTAPQQQRLVTC-QYDD 465 Query: 75 LGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQPGSFTPL 134 G + G S W D R++ ++ R+ + P + Sbjct: 466 NGFLT--ECDTFQFTHIGHEYSSEGFMTCWRDTDKTRVSYRYDNAGRVTEVSTPEGY-YD 522 Query: 135 IRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSEESR 194 R E T + + EDG + L R E+ + + + Sbjct: 523 DRFIYNDQERCTTYTDAEGGETRFWYNEDG----LVTRSLDPLGREETSVWKNTQLQSRT 578 Query: 195 RWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNL 254 L + V P Y + G L G W +YD+ G++ Sbjct: 579 DALGRTTQYQYNDDGDISQVALPGGHSLYYDYNESGQLTRLTLP-GEQVWQWDYDDRGSM 637 Query: 255 LNEENPHQLQQLIRL-----------PGQ---QYDEESGLYYNRHRYYD---PLQGRY-I 296 ++ +P +Q PG Q+D Y HR + P G Sbjct: 638 VSLTDPQGRRQQFSYSEHGDLLRQIMPGGVTWQWD-----YDALHRLRETTAPDGGVTQT 692 Query: 297 TQDPIGLKGGWNFYQYPLNPVQYIDSMGLASKYGHLNNGGYGARPNKPPTPDPSKLPDIA 356 QD +G + D +G +++ H + G + + P + ++ Sbjct: 693 EQDMLGRL------------LSVQDPLGFTTQFRHSKHHA-GPQGSVEEIHRPDGVRELM 739 Query: 357 KQLRLPYPIDQASSAPNVFKTFFRA-------LSPYDYTLYCRKWVKPNLTCTPQDDSQY 409 +Q P + + A + P L CR LT + + Sbjct: 740 RQNSEKLPESVTDGEGRTTRYEYGAFDLLTAIIRPDGERLECRYDKLTRLTEIINAEGES 799 Query: 410 PGMDTKTASDYLPQTNWPTTQLPPGYTCAEPYL---FPD 445 + A + +T++ L Y A + FPD Sbjct: 800 YRLTYDKAGQLVAETDFTGRTLTYSYDAAGRCIRTTFPD 838 Score = 47.9 bits (112), Expect = 0.001, Method: Composition-based stats. Identities = 54/273 (19%), Positives = 84/273 (30%), Gaps = 62/273 (22%) Query: 6 RIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPL 65 R YRYD GR+TE + + R+ Y+ Q R YT + Sbjct: 494 RDTDKTRVSYRYDNAGRVTEVST--------PEGYYDDRFIYNDQERCTTYTDAEGG--- 542 Query: 66 VESRYLY----------DPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTI 115 E+R+ Y DPLG R VW+ + + +L R Q Y DGD ++ + Sbjct: 543 -ETRFWYNEDGLVTRSLDPLG-REETSVWKNTQLQSRTDALGRTTQ-YQYNDDGD-ISQV 598 Query: 116 QNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQ 175 Y L R+ + + Q +D GS+V Sbjct: 599 ALPGGHSLY-YDYNESGQLTRLTLPGEQ------------VWQWDYDDRGSMV------- 638 Query: 176 MLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLAL 235 L D + + G + Q+ P + D Sbjct: 639 --------SLTDPQGRRQQFSYSEHGDLLRQI--------MPGGVTWQWDYDALHRLRET 682 Query: 236 VSTEGATEWCAEYDEWGNLLNEENPHQLQQLIR 268 + +G E D G LL+ ++P R Sbjct: 683 TAPDGGVT-QTEQDMLGRLLSVQDPLGFTTQFR 714 Score = 43.6 bits (101), Expect = 0.018, Method: Composition-based stats. Identities = 41/229 (17%), Positives = 62/229 (27%), Gaps = 33/229 (14%) Query: 8 ARDAHYLYRYDRHGRLTEKTDLIPEGVIRT------------DDERTHRYHYDSQHRLVH 55 A Y YD+ G+L +TD + + D Y+ ++ Sbjct: 795 AEGESYRLTYDKAGQLVAETDFTGRTLTYSYDAAGRCIRTTFPDGTRLNRRYNVTDQVTD 854 Query: 56 YTRTQYAEPLVESR--YLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLT 113 TQ V SR + YD L R V + D T + RLT Sbjct: 855 EEVTQGDSDRVLSRTTFRYDTLCRLVE----AKNDDATVTLEYDSAG----------RLT 900 Query: 114 TIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVL 173 + R + Y + T + + RSL L D + L Sbjct: 901 AETLNGRRTEYRYDA---ERDYVTQRTTAGITERFTRSLTGKLSSWQLADHAPLTLEHDL 957 Query: 174 VQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIH 222 S+ A +S + DP Y +H Sbjct: 958 CGRETARRSD--AGFSLRQSHTPTGMLAEQQAGDLTEPDPHYRRNSTLH 1004 >UniRef50_B4ETQ7 Putative Rhs-family protein n=3 Tax=Enterobacteriaceae RepID=B4ETQ7_PROMH Length = 380 Score = 175 bits (443), Expect = 3e-42, Method: Composition-based stats. Identities = 83/335 (24%), Positives = 120/335 (35%), Gaps = 37/335 (11%) Query: 50 QHRLVHYTRTQYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWD- 108 Q + TR A+ + Y YD GR K V R +P+ Y W+ Sbjct: 7 QQQAGRVTRRYTAKGYQD--YHYDVNGRLAKKIVHTR----------GFRPREWRYLWNT 54 Query: 109 GDRLTTIQNDRTRIQTIYQPGSF-TPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSV 167 ++LT + Y +F L + +T +LA D L + Sbjct: 55 QNQLTACFTPKGDC-WHYTYDAFGRRLSKTKTVDSDLAHI------DPLFPQIKPKITTW 107 Query: 168 VFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCD 227 + Q+++ + + +WL G + Q K+H D Sbjct: 108 RYLWSGDQLIEETPIYADGTLANAQQVQWLYQPGEITPTARYQQ-------GKLHYVVTD 160 Query: 228 HRGLPLALVSTEGATEWCAEYDEWGNL--------LNEENPHQLQQLIRLPGQQYDEESG 279 H+G P + G W + WG + E +P+ + R GQ DEESG Sbjct: 161 HQGTPREIFCEGGQASWAGRLNTWGQMQFWRYRDGKAENDPNYTECPFRFAGQYEDEESG 220 Query: 280 LYYNRHRYYDPLQGRYITQDPIGLKGGWNFYQYPLNPVQYIDSMGLASK-YGHLNNGGYG 338 LYYNR RYYD G+Y++ DPIGL GG N Y Y P ++D GLA + G Sbjct: 221 LYYNRFRYYDRETGQYLSPDPIGLLGGLNPYGYVHCPTGWVDPFGLACCPPPKIKATQIG 280 Query: 339 ARPNKPPTPDPSKLPDIAKQLRLPYPIDQASSAPN 373 R K + D LP N Sbjct: 281 LRNPKQIDGMKKDMLDGTFDFSLPKNQVGGFVDSN 315 >UniRef50_C7Q0A7 YD repeat protein n=2 Tax=Catenulispora acidiphila DSM 44928 RepID=C7Q0A7_CATAD Length = 1528 Score = 174 bits (442), Expect = 4e-42, Method: Composition-based stats. Identities = 72/320 (22%), Positives = 109/320 (34%), Gaps = 51/320 (15%) Query: 15 YRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYLYDP 74 Y YD G LT + D + + + +RY +D Sbjct: 1119 YAYDAFGNLTVQDDAAGPLNLPAT----------AAGEGAGFATRTLIRRSARARYEHDQ 1168 Query: 75 LGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDG-DRLTTIQND-RTRIQTIYQPGSFT 132 GR + +L + +VT Y WD DRL + Y P Sbjct: 1169 AGRLTR----------SVRRTLDGRSKVTQYVWDSEDRLVHVITPENGTWHYSYDP---- 1214 Query: 133 PLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRL-ESEILADRVSE 191 L ++ D G+VV + RL E + Sbjct: 1215 -------------------LGRRTAKTRFADDGTVVDRVTFLWDGPRLAEQSVQGPESFT 1255 Query: 192 ESRRWLASCGLTVEQMQNQMDPVYTPARKI-----HLYHCDHRGLPLALVSTEGATEWCA 246 + W G Q + + + + + H D G P LV+ +G W Sbjct: 1256 VTLTWDYDPGTFRPATQRRRNRLGDADQTVIDEAFHAIVADLVGSPTELVTPDGRVVWHT 1315 Query: 247 EYDEWGNLLNEENPHQLQQLIRLPGQQYDEESGLYYNRHRYYDPLQGRYITQDPIGLKGG 306 WG + + +R PGQ +D+ESGL+YN +RYYD Y+T DP+GL Sbjct: 1316 TTSLWGRTIGTSAESGVDCPLRFPGQYHDDESGLHYNLNRYYDSETAAYLTPDPLGLVPA 1375 Query: 307 WNFYQYPLNPVQYIDSMGLA 326 N + Y NP+ D +GL+ Sbjct: 1376 PNDHAYVPNPLTVSDPLGLS 1395 Score = 59.8 bits (143), Expect = 2e-07, Method: Composition-based stats. Identities = 42/270 (15%), Positives = 82/270 (30%), Gaps = 29/270 (10%) Query: 14 LYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYLYD 73 + YD GRLT + + Y ++ R+ +T Y YD Sbjct: 531 RFSYDGQGRLT---------GVINSSDVPFSYEWNDTDRISAWTDQAG----YRYGYHYD 577 Query: 74 PLGRRVAKR------VWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQ 127 +GR V + + + + + VT + +D + + D T+ + Sbjct: 578 AIGRVVRGQGQFLAGSFTYDPAHRTTVHTNSLGHVTTFVYDENGHVCSETDALGHTTLTE 637 Query: 128 PGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILA- 186 + +I T T R A +++ DG + + + A Sbjct: 638 TDRYG-MILSRTDALGTRTTLVRDEAGNVRRLVATDGATAELEYNHLHQVVAATGRGGAT 696 Query: 187 -----DRVSEESRRWLASCGLTVEQMQNQMDPVYT--PARKIHLYHCDHRGLPLALVSTE 239 D + G+T + + T P + + D GLP+ ++ Sbjct: 697 WRRAHDDRGNLVSATDPAGGVTEFEYTAEGVLAATTDPLGAVTRFTTDAAGLPVTVLDAV 756 Query: 240 GATEWCAEYDEWGNLLNEENPHQLQQLIRL 269 G+ E D G ++ +P Sbjct: 757 GSLT-RVERDFAGRVVRLTDPMGAVTAFEW 785 Score = 59.4 bits (142), Expect = 3e-07, Method: Composition-based stats. Identities = 48/310 (15%), Positives = 79/310 (25%), Gaps = 76/310 (24%) Query: 12 HYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYL 71 + + YD +L T+ Y YD+ RL + Y Sbjct: 843 RHNFTYDSELKLVAVTN---------PHGAAWTYTYDAAGRLTGESDFIG----RRLGYE 889 Query: 72 YDPLGRRVAK-----RVWRRERDLTGWMSLSRKPQVTW-YGWD-GDRLTTIQNDRTRIQT 124 YD GR A+ + +RD TG + P+ + Y +D RL + + Sbjct: 890 YDVAGRLCARITGTGQRLTLDRDATGRIVARHTPEGDYGYTYDSAGRLVVATGPNSELS- 948 Query: 125 IYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLES-- 182 Y+ + L + T T + LA L + G + L++ Sbjct: 949 -YEYDTLGRL--LATTTDDRTMRYSYDLAGRLIRRTTASGVESTWTYDSAGRAVGLDTGG 1005 Query: 183 ---EILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYH-----CDHR----- 229 E D E R + S P+ + +H D Sbjct: 1006 DRLEFGFDASGREIERLIGSEVWLTRSYDVVGRPIAQSVGRGRRHHDQAAQTDLIIAGSR 1065 Query: 230 -----------------------------GLPLALVSTEGATEW--------CAEYDEWG 252 G G YD +G Sbjct: 1066 TGKAVQEVLQRSWVWRQDGVPEEIRDSLRGTSRIASDAAGRVTAISAHSWSESYAYDAFG 1125 Query: 253 NLLNEENPHQ 262 NL +++ Sbjct: 1126 NLTVQDDAAG 1135 Score = 54.8 bits (130), Expect = 7e-06, Method: Composition-based stats. Identities = 51/279 (18%), Positives = 82/279 (29%), Gaps = 40/279 (14%) Query: 2 WPDN-RIARDAH-----YLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVH 55 W D RI+ Y Y YD GR+ G + YD HR Sbjct: 555 WNDTDRISAWTDQAGYRYGYHYDAIGRVVRGQGQFLAGS----------FTYDPAHRTTV 604 Query: 56 YTRTQYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTI 115 +T + + ++YD G ++ LT T G R T + Sbjct: 605 HTNSLGH----VTTFVYDENGHVCSETDALGHTTLTETDRYGMILSRT--DALGTRTTLV 658 Query: 116 QNDRTRIQTIYQPG------SFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVF 169 +++ ++ + + L +V ATG T RR+ D D V Sbjct: 659 RDEAGNVRRLVATDGATAELEYNHLHQVVAATGRGGATWRRAHDDRGNLVSATDPAGGVT 718 Query: 170 PPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHR 229 + D + +R + GL V V + D Sbjct: 719 EFEYTAEGVLAAT---TDPLGAVTRFTTDAAGLPV--------TVLDAVGSLTRVERDFA 767 Query: 230 GLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIR 268 G + L GA E++ G ++ P + R Sbjct: 768 GRVVRLTDPMGAVTA-FEWNAEGLPVSRTLPDGARTTWR 805 >UniRef50_C7MZM5 Rhs family protein n=1 Tax=Saccharomonospora viridis DSM 43017 RepID=C7MZM5_SACVD Length = 1259 Score = 173 bits (439), Expect = 1e-41, Method: Composition-based stats. Identities = 83/377 (22%), Positives = 125/377 (33%), Gaps = 66/377 (17%) Query: 10 DAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVE-- 67 + DR GR+T T RY YD+ L H + +E Sbjct: 838 TGPRTFELDRIGRITAVT----------GTGWAERYAYDAAGNLTHASWPAPPSSDIEEL 887 Query: 68 ---------------SRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGD-R 111 RY +D GR + ++ R LSRKP+ Y W+ D R Sbjct: 888 GDREYSGTLIRRAGKVRYEHDAQGRIILRQRKR----------LSRKPETWRYFWNADDR 937 Query: 112 LTTIQND-RTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFP 170 L + R + Y P RR L G + F Sbjct: 938 LIEVLTPNGARWRYRYDP------------------LGRRVAKQRLTPDGSGVLEQIEFT 979 Query: 171 PVLVQMLDRLESEILADRVSEESRR---WLASCGLTVEQMQNQMDPVYTP-----ARKIH 222 + ++ ++ +A+ RR W G +Q + + + + Sbjct: 980 WDGAVLAEQAHTDGVANGPRLADRRVMVWDYEPGTFRPLVQRERSQLRNAPQQWFDEQFY 1039 Query: 223 LYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEESGLYY 282 D G P L++ G W WG ++ +R PGQ D E+G Y Sbjct: 1040 SIVTDIVGTPTELINIHGGIAWYHRTTLWGITTDQSRTGAYT-PLRFPGQYADPETGFNY 1098 Query: 283 NRHRYYDPLQGRYITQDPIGLKGGWNFYQYPLNPVQYIDSMGLASKYGHLNNGGYGARPN 342 N R+YDP RY DP+GL GG++ + Y NP +ID +GL A+ N Sbjct: 1099 NFQRHYDPASARYAGTDPLGLVGGFDPHSYVWNPYAWIDPLGLKKCDPDRPKHFEKAKEN 1158 Query: 343 KPPTPDPSKLPDIAKQL 359 + + A Q Sbjct: 1159 LAEFNSIDEAREAAIQY 1175 Score = 89.5 bits (220), Expect = 3e-16, Method: Composition-based stats. Identities = 49/251 (19%), Positives = 77/251 (30%), Gaps = 42/251 (16%) Query: 2 WPDNRIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQY 61 + I R Y +D GR+ + T RY +++ RL+ Sbjct: 892 YSGTLIRRAGKVRYEHDAQGRIILRQRKRLSRK-----PETWRYFWNADDRLIEVLTPNG 946 Query: 62 AEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQN---- 117 A RY YDPLGRRVAK+ + + + WDG L + Sbjct: 947 A----RWRYRYDPLGRRVAKQRLTPDGSGVL--------EQIEFTWDGAVLAEQAHTDGV 994 Query: 118 -------DRTRIQTIYQPGSFTPLIRVETAT---------GELAKTQRRSLADTLQQSGG 161 DR + Y+PG+F PL++ E + E + + T + Sbjct: 995 ANGPRLADRRVMVWDYEPGTFRPLVQRERSQLRNAPQQWFDEQFYSIVTDIVGTPTELIN 1054 Query: 162 EDGGSVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKI 221 GG + + + +S A ++ Q DP Sbjct: 1055 IHGGIAWYHRTTLWGITTDQSRTGAYTPLRFPGQYADPETGFNYNFQRHYDPASA----- 1109 Query: 222 HLYHCDHRGLP 232 D GL Sbjct: 1110 RYAGTDPLGLV 1120 Score = 62.9 bits (151), Expect = 3e-08, Method: Composition-based stats. Identities = 44/271 (16%), Positives = 78/271 (28%), Gaps = 36/271 (13%) Query: 7 IARDAHYLYRYDRHGRL------------TEKTDLIPEGVIRTDDERTHRYHYDSQHRLV 54 + A + YD G L TE T D R+ YD++ RLV Sbjct: 561 LPDGATERWIYDGEGNLRVHVDALGQETRTEVTHFDLPSEEIRPDGTRLRFDYDTECRLV 620 Query: 55 HYTRTQYAEPLVESRYLYDPLGRRVAKR-------VWRRERDLTGWMSLSRKPQVTWYGW 107 T Q + RY YD G V + ++ + + + T + Sbjct: 621 SVTNEQG----LVWRYDYDAAGNLVRETDFNGRVLTYQHDAAGQLIARTNGAGETTHFAR 676 Query: 108 D--GDRLTTIQNDRTRIQTIYQP-----GSFTPLIRVETATGELAKTQRRSLADTLQQSG 160 D G+ + T Y P + +V L + ++ S Sbjct: 677 DVFGNVIERRSGAVTA-TFTYDPLGRLVEAMDSDTQVTFRRDPLGRVLAETVNGRTVASV 735 Query: 161 GEDGGSVVFPPVLVQMLDRLESEILADRVSEES--RRWLASCGLTVEQMQNQMDPVYTPA 218 + G + E + V+ + ++Q Q+ P A Sbjct: 736 YDALGRRIRRRTPSGAETVWEYDANDQPVALHTGGHTLRFDYDRAGREVQRQLGPTAILA 795 Query: 219 RKIHLYHCDHRGLPLALVSTEGATEWCAEYD 249 ++ + +HR + A+ G Y Sbjct: 796 QE---WDTNHRLISQAVTGAAGQRIQQRSYT 823 Score = 61.4 bits (147), Expect = 7e-08, Method: Composition-based stats. Identities = 44/266 (16%), Positives = 78/266 (29%), Gaps = 38/266 (14%) Query: 14 LYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYLYD 73 + YD GR+ TD ++R +RY YDSQ R+V + + + YD Sbjct: 315 RFTYDHAGRIIGWTDR---------NDRWYRYTYDSQGRVVS---GEGSGGFLSGTMEYD 362 Query: 74 PLGRRV--------AKRVWRRERDLTGWMSLSRKPQVTWYGWD-GDRLTTIQNDRTRIQT 124 R+ A+ + + T WD DRL + + R Sbjct: 363 TE-NRITYWTDSQGARTTYHLNEAGQTIREIDPLGNETLSEWDEYDRLLSRTDPLGRTT- 420 Query: 125 IYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEI 184 Y+ LI + G A+ + L + + + + ++ Sbjct: 421 RYEYDDEGNLIVLTRPDGSQARFEYNELGLPVTIIAPDGTVTRREYDERGNLTKEIDPLG 480 Query: 185 LADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEW 244 + + R L S + + D GLP+ + G T Sbjct: 481 AVTGYAYDERGHLTSITDALGNVTRVK--------------TDAAGLPIKVTYPMGNT-S 525 Query: 245 CAEYDEWGNLLNEENPHQLQQLIRLP 270 D +G + +P Sbjct: 526 RYMRDAFGRVSEAIDPLGGTTRFGWT 551 Score = 60.2 bits (144), Expect = 2e-07, Method: Composition-based stats. Identities = 71/392 (18%), Positives = 107/392 (27%), Gaps = 78/392 (19%) Query: 13 YLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQY----------- 61 + Y YD G L +TD + R Y +D+ +L+ T Sbjct: 630 WRYDYDAAGNLVRETDF---------NGRVLTYQHDAAGQLIARTNGAGETTHFARDVFG 680 Query: 62 -----AEPLVESRYLYDPLGRRV----AKRVWRRERDLTGWMSLSRKPQVT---WYGWDG 109 V + + YDPLGR V + RD G + T Y G Sbjct: 681 NVIERRSGAVTATFTYDPLGRLVEAMDSDTQVTFRRDPLGRVLAETVNGRTVASVYDALG 740 Query: 110 DRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVF 169 R+ Y P+ G + +Q+ G Sbjct: 741 RRIRRRTPSGAETVWEYDAND-QPVALH--TGGHTLRFDYDRAGREVQRQLGPTAILAQE 797 Query: 170 PPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHR 229 +++ + + R+ + S + A LT D + P + D Sbjct: 798 WDTNHRLISQAVTGAAGQRIQQRSYTYRADGFLT-----KLDDKLTGPRT----FELDRI 848 Query: 230 GLPLALVSTEGATEWCAEYDEWGNLLNEE-------------NPHQLQQLIRLPGQ--QY 274 G A+ T YD GNL + + LIR G+ Sbjct: 849 GRITAVTGT--GWAERYAYDAAGNLTHASWPAPPSSDIEELGDREYSGTLIRRAGKVRYE 906 Query: 275 DEESGLYYNRHR---YYDPLQGRYI--TQDPIGLKGGWN----FYQYPLNPVQYIDSMGL 325 + G R R P RY D + N Y+Y D +G Sbjct: 907 HDAQGRIILRQRKRLSRKPETWRYFWNADDRLIEVLTPNGARWRYRY--------DPLGR 958 Query: 326 ASKYGHLNNGGYGARPNKPPTPDPSKLPDIAK 357 L G G T D + L + A Sbjct: 959 RVAKQRLTPDGSGVLEQIEFTWDGAVLAEQAH 990 Score = 58.3 bits (139), Expect = 6e-07, Method: Composition-based stats. Identities = 57/260 (21%), Positives = 97/260 (37%), Gaps = 32/260 (12%) Query: 16 RYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYLYDPL 75 +D + RL +TD + RT RY YD + L+ TR + ++R+ Y+ L Sbjct: 402 EWDEYDRLLSRTDPL---------GRTTRYEYDDEGNLIVLTRPDGS----QARFEYNEL 448 Query: 76 GRRV-----AKRVWRRERDLTGWMSLSRKP--QVTWYGWDGD-RLTTIQNDRTRIQTIYQ 127 G V V RRE D G ++ P VT Y +D LT+I + + + Sbjct: 449 GLPVTIIAPDGTVTRREYDERGNLTKEIDPLGAVTGYAYDERGHLTSITDALGNVTRVKT 508 Query: 128 PGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFP------PVLVQMLDRLE 181 + P I+V G ++ R + ++ GG+ F P + D Sbjct: 509 DAAGLP-IKVTYPMGNTSR-YMRDAFGRVSEAIDPLGGTTRFGWTVDGKPAWRTLPDGAT 566 Query: 182 SEILADRVSEESRRWLASCGLTVEQMQNQMDP--VYTPARKIHLYHCDHRGLPLALVSTE 239 + D A T ++ + P P + D +++ + + Sbjct: 567 ERWIYDGEGNLRVHVDALGQETRTEVTHFDLPSEEIRPDGTRLRFDYDTECRLVSVTNEQ 626 Query: 240 GATEWCAEYDEWGNLLNEEN 259 G W +YD GNL+ E + Sbjct: 627 G-LVWRYDYDAAGNLVRETD 645 Score = 46.3 bits (108), Expect = 0.002, Method: Composition-based stats. Identities = 47/286 (16%), Positives = 87/286 (30%), Gaps = 55/286 (19%) Query: 8 ARDAHYLYRYDRHG-------------RLTEKTDLIPEGVIRTDDERTH----RYHYDSQ 50 + YD G R+ + L+ +R D + RY Y+ + Sbjct: 242 RNGNRIDFEYDAAGTPVEVRHSGGYRIRVESEGGLVTALYLREADNGSDVLLMRYGYEDR 301 Query: 51 HRLVHYTRTQYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGD 110 RL + R+ YD GR + GW + + Y G Sbjct: 302 -RLTEVINASG----LPMRFTYDHAGRII------------GWTDRNDRWYRYTYDSQG- 343 Query: 111 RLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFP 170 R+ + + + + + + + G T+++ ++ Sbjct: 344 RVVSGEGSGGFLSGTMEYDTENRITYWTDSQGARTTYHLNEAGQTIREIDPLGNETLSEW 403 Query: 171 PVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRG 230 ++L R D + +R G + + P + + G Sbjct: 404 DEYDRLLSR------TDPLGRTTRYEYDDEGNLIVLTR--------PDGSQARFEYNELG 449 Query: 231 LPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQYDE 276 LP+ +++ +G EYDE GNL E +P G YDE Sbjct: 450 LPVTIIAPDGTVT-RREYDERGNLTKEIDPLGAV-----TGYAYDE 489 >UniRef50_C7QAC6 YD repeat protein n=2 Tax=Bacteria RepID=C7QAC6_CATAD Length = 1508 Score = 173 bits (439), Expect = 1e-41, Method: Composition-based stats. Identities = 88/377 (23%), Positives = 130/377 (34%), Gaps = 70/377 (18%) Query: 6 RIARDAHYLYRYDRHG---------RLTEKTDLIPEGV---IRTDDERTHRYHYDSQHRL 53 RI Y Y G R T++ P G +R Y YD + Sbjct: 1079 RIDPSLSRSYAYHADGVPAAVTDSLRGTQEYIADPRGRISEVRGPHGGGESYSYDGFGNI 1138 Query: 54 VHYT-------------RTQYAEPLVESRYLYDPLGR--RVAKRVWRRERDLTGWMSLSR 98 V R Y YD GR R+ K+ LS Sbjct: 1139 VQAASALSTDSIGGRDVRGTRVLRAGHVHYDYDAAGRVVRIRKQT------------LSG 1186 Query: 99 KPQVTWYGWDGD-RLTT-IQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTL 156 + ++ + WD D RL + D + Y P R LA Sbjct: 1187 QVRIQTFAWDADGRLKQAVLPDGSAWHYRYDP-------------------LGRRLAKQH 1227 Query: 157 QQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYT 216 + G + V F +++++ + A R + + + GL V Q + Sbjct: 1228 VLADGTEAERVEFAWDGPRLIEQHSLDA-AGRTTTVTWDYDPDTGLPVAQRRRSWAAEAA 1286 Query: 217 PAR---KIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQ--LQQLIRLPG 271 R H + G+P LV+ +G W D +G + L+ +R G Sbjct: 1287 QERVDEMFHAIVTNLVGMPTELVTPDGRVAWYQNTDLYGQSVAVATGGDPDLECPLRFAG 1346 Query: 272 QQYDEESGLYYNRHRYYDPLQGRYITQDPIGLKGGWNFYQYPLNPVQYIDSMGLASKYG- 330 Q +D E+GL+YN RYYDP Y+T DP+GL N + Y NP+ +D +GLAS Sbjct: 1347 QYFDAETGLHYNVQRYYDPAIAAYLTPDPLGLAPALNDHAYVPNPLTMVDPLGLASGARV 1406 Query: 331 ---HLNNGGYGARPNKP 344 + GGY N Sbjct: 1407 PSPPFSAGGYSTPGNNQ 1423 Score = 71.0 bits (172), Expect = 9e-11, Method: Composition-based stats. Identities = 45/274 (16%), Positives = 76/274 (27%), Gaps = 33/274 (12%) Query: 14 LYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYLYD 73 Y YD HGRLT + + Y +D HR+ + Y YD Sbjct: 554 RYEYDEHGRLT---------GVVNSSGMPYTYQWDDFHRITAW----VDRSGFRYSYEYD 600 Query: 74 PLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQPGSFTP 133 GR V R + L+G + + T + +R T D S Sbjct: 601 TNGRVV--RGVGADGYLSGDFAYDPAARTTVFTDSLNRAKTYHYDLNGHLDRAVEASGAA 658 Query: 134 LIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSEES 193 L+ ++ A G + R T+ V P + + V + Sbjct: 659 LVFLDDAYGRRLRGTDRRGMTTVFDRDAAGNTIRVQRPDGTTLSAEFNALNSPTSVVQAD 718 Query: 194 RRWLASCGLTVEQMQNQMDPVYTPARKIH-----------------LYHCDHRGLPLALV 236 + Q+DP+ + Y D G +++ Sbjct: 719 GTCWRQEHDAAGNVIVQLDPLDARTEFGYDSLGALVSITDDAGDRTAYEVDAAGQTVSVT 778 Query: 237 STEGATEWCAEYDEWGNLLNEENPHQLQQLIRLP 270 +G+ E D +G ++ P Sbjct: 779 GPDGSVH-RIERDAFGRVVAVTAPDGGVTRYAWS 811 Score = 65.2 bits (157), Expect = 5e-09, Method: Composition-based stats. Identities = 60/289 (20%), Positives = 97/289 (33%), Gaps = 39/289 (13%) Query: 5 NRIARDAHYLYRYDRHGRLTEKT----------DLIPEGVIRTDDERTHRYHYDSQHRLV 54 R DA Y Y YD +GR+ + D + V T D RT R YD+ R V Sbjct: 944 GRQTVDAEYTYGYDANGRMLSASGAGSRLEFAYDAVGRVVAETIDGRTTRSGYDALGRRV 1003 Query: 55 HYTRTQYAEPLVESRYLYDPLGRRV---AKRVWRRERDLTGWMSLSRKPQV------TWY 105 A ES + YD GR V A V + G +SR + + Sbjct: 1004 ARVTPAGA----ESSWRYDATGRAVVFAAGDVEQHIGYDLGGREVSRALGIGGAVLSRAF 1059 Query: 106 GWDG---------DRLTTIQNDRTRIQTIYQPGSFTPLIRVETATG--ELAKTQRRSLAD 154 G +R+ T + D + ++ P ++ G E R +++ Sbjct: 1060 DAAGRIATERIATERIATERIDPSLSRSYAYHADGVPAAVTDSLRGTQEYIADPRGRISE 1119 Query: 155 TLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPV 214 GG + S +VQ L ++ + R +R A ++ + Sbjct: 1120 VRGPHGGGESYSYDGFGNIVQAASALSTDSIGGRDVRGTRVLRAGHVHYDYDAAGRVVRI 1179 Query: 215 YTPA----RKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEEN 259 +I + D G V +G+ W YD G L +++ Sbjct: 1180 RKQTLSGQVRIQTFAWDADGRLKQAVLPDGS-AWHYRYDPLGRRLAKQH 1227 Score = 59.0 bits (141), Expect = 4e-07, Method: Composition-based stats. Identities = 52/294 (17%), Positives = 79/294 (26%), Gaps = 50/294 (17%) Query: 10 DAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESR 69 DA + YD G L TD D Y D+ + V T + +E Sbjct: 740 DARTEFGYDSLGALVSITD---------DAGDRTAYEVDAAGQTVSVTGPDGSVHRIER- 789 Query: 70 YLYDPLGRRVAKR-----VWRRERDLTGWMSLSRKPQVTWYGW--DGDRLTTIQNDRTRI 122 D GR VA V R + G + +P + W D D D+ Sbjct: 790 ---DAFGRVVAVTAPDGGVTRYAWSVEGGLRSRVRPDGSREAWETDADGNLVAYTDQLGA 846 Query: 123 QTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLES 182 T Y+ G P +V A +Q G V + Q + ++ Sbjct: 847 VTRYEVG---PFGKVAARIEADATRFEYRYDTEMQVVSVTGPGQVQWSYTYDQSGNLVQE 903 Query: 183 EILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKI---------HLYHCDHRGL-- 231 DR S +V+ + +M P ++ + Y D G Sbjct: 904 TDYNDRSLAYSYDADGWLAESVDALGQRMVFQRDPLGRVVGRQTVDAEYTYGYDANGRML 963 Query: 232 --------PLALVSTEGATEW--------CAEYDEWGNLLNEENPHQLQQLIRL 269 G + YD G + P + R Sbjct: 964 SASGAGSRLEFAYDAVGRVVAETIDGRTTRSGYDALGRRVARVTPAGAESSWRY 1017 Score = 56.3 bits (134), Expect = 3e-06, Method: Composition-based stats. Identities = 48/317 (15%), Positives = 81/317 (25%), Gaps = 70/317 (22%) Query: 2 WPD-NRIARDAH-----YLYRYDRHGRLTE------------KTDLIPEGVIRTDD-ERT 42 W D +RI Y Y YD +GR+ D + TD R Sbjct: 578 WDDFHRITAWVDRSGFRYSYEYDTNGRVVRGVGADGYLSGDFAYDPAARTTVFTDSLNRA 637 Query: 43 HRYHYDSQHRLVHYTRTQYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQV 102 YHYD L + +L D GRR+ R + + +V Sbjct: 638 KTYHYD----LNGHLDRAVEASGAALVFLDDAYGRRLRGTDRRGMTTVFDRDAAGNTIRV 693 Query: 103 TWYGWDGDRLTT-----------IQNDRTRIQTIYQ-------------------PGSFT 132 DG L+ +Q D T + + S Sbjct: 694 QR--PDGTTLSAEFNALNSPTSVVQADGTCWRQEHDAAGNVIVQLDPLDARTEFGYDSLG 751 Query: 133 PLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSEE 192 L+ + G+ + + T+ +G + + +++ + Sbjct: 752 ALVSITDDAGDRTAYEVDAAGQTVSVTGPDGSVHRIERDAFGRVVAVTAPDG-----GVT 806 Query: 193 SRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWG 252 W GL + + D G +A GA E +G Sbjct: 807 RYAWSVEGGLRSRVRPDGSREAWE---------TDADGNLVAYTDQLGAVT-RYEVGPFG 856 Query: 253 NLLNEENPHQLQQLIRL 269 + + R Sbjct: 857 KVAARIEADATRFEYRY 873 Score = 49.0 bits (115), Expect = 4e-04, Method: Composition-based stats. Identities = 58/331 (17%), Positives = 105/331 (31%), Gaps = 39/331 (11%) Query: 14 LYRYDRHGRLTEKTDLIPEGVIRTDDERTHR------------YHYDSQHRLVHYTRTQY 61 Y YD +G L + ++ DD R + D+ + R Sbjct: 639 TYHYDLNGHLDRAVEASGAALVFLDDAYGRRLRGTDRRGMTTVFDRDAAGNTIRVQRPDG 698 Query: 62 AEPLVESRYLYDPLGRRVAK-RVWRRERDLTGWMSLSRKP--QVTWYGWDGDRLTTIQND 118 E L P A WR+E D G + + P T +G+D D Sbjct: 699 TTLSAEFNALNSPTSVVQADGTCWRQEHDAAGNVIVQLDPLDARTEFGYDSLGALVSITD 758 Query: 119 RTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLD 178 +T Y+ + + V G + + +R + + + + G + V + Sbjct: 759 DAGDRTAYEVDAAGQTVSVTGPDGSVHRIERDAFGRVVAVTAPDGGVTRYAWSVEGGLRS 818 Query: 179 RLESEILADR-VSEESRRWLASCGLTVEQMQNQMDPVYTPARKI------HLYHCDHRGL 231 R+ + + ++ +A + ++ P A +I Y D Sbjct: 819 RVRPDGSREAWETDADGNLVAYTDQLGAVTRYEVGPFGKVAARIEADATRFEYRYDTEMQ 878 Query: 232 PLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEESGLYYNRHRYYDPL 291 +++ G +W YD+ GNL+ E + + + ES D L Sbjct: 879 VVSVTGP-GQVQWSYTYDQSGNLVQETDYNDRSLAYSYDADGWLAES---------VDAL 928 Query: 292 QGRYI-TQDPIGLKGGWN------FYQYPLN 315 R + +DP+G G Y Y N Sbjct: 929 GQRMVFQRDPLGRVVGRQTVDAEYTYGYDAN 959 Score = 46.3 bits (108), Expect = 0.003, Method: Composition-based stats. Identities = 47/284 (16%), Positives = 77/284 (27%), Gaps = 46/284 (16%) Query: 3 PDNRIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYA 62 PD + R D GR+ T D RY + + L R + Sbjct: 780 PDGSVHRIER-----DAFGRVVAVT---------APDGGVTRYAWSVEGGLRSRVRPDGS 825 Query: 63 EPLVES-----------------RYLYDPLGRRVAKRVWRRERDLTGWMS-------LSR 98 E+ RY P G+ A+ R + + Sbjct: 826 REAWETDADGNLVAYTDQLGAVTRYEVGPFGKVAARIEADATRFEYRYDTEMQVVSVTGP 885 Query: 99 KPQVTWYGWDGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQ 158 Y +D + D Y + L A G+ QR L + + Sbjct: 886 GQVQWSYTYDQSGNLVQETDYNDRSLAYSYDADGWLAESVDALGQRMVFQRDPLGRVVGR 945 Query: 159 SGGEDGGSVVFPPVLVQMLDRLESEILADRVSEESRRWLASC--GLTVEQMQNQMD---P 213 + + + +ML + + + R +A G T + + Sbjct: 946 QTVDAEYTYGYD-ANGRMLSASGAGSRLEFAYDAVGRVVAETIDGRTTRSGYDALGRRVA 1004 Query: 214 VYTPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNE 257 TPA + D G A+V G E YD G ++ Sbjct: 1005 RVTPAGAESSWRYDATG--RAVVFAAGDVEQHIGYDLGGREVSR 1046 >UniRef50_A9GIJ6 Conserved carbohydrate-binding protein, Rhs family n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=A9GIJ6_SORC5 Length = 1429 Score = 173 bits (438), Expect = 1e-41, Method: Composition-based stats. Identities = 87/382 (22%), Positives = 134/382 (35%), Gaps = 47/382 (12%) Query: 9 RDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVE- 67 R + +D G++ +T + +G + YD++ + Sbjct: 850 RSGAERWEHDPRGQVLARTGVHGQG---------EHFRYDAEGNVRELGPGAPEREYGRG 900 Query: 68 --------SRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTT--IQN 117 Y++D GR + +RV + S + T Y W+G L + ++ Sbjct: 901 NVLLRRGPVSYVWDGDGRLIKRRV----------VMPSGQEATTSYEWNGAGLLSAVVRP 950 Query: 118 DRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQML 177 D RI+ +Y P R+E + R T + D Sbjct: 951 DGVRIEHVYDP----FARRLEKRVVRRGEGGRMDTLSTTRFIWDGDTLVHEIKREWGPEG 1006 Query: 178 DRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVS 237 DR+ E E S W Q + + + + Y D G P L+ Sbjct: 1007 DRVTQERTYCTDEETSAPW--------AQKDARSGEGDAVSAEWYYYLNDPVGRPERLLD 1058 Query: 238 TEGATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEESGLYYNRHRYYDPLQGRYIT 297 G + WG E + + +R GQ YD+E+GL YNR+RYYDP GRYI+ Sbjct: 1059 AAGNVACELDRTVWGAARPREGA-RTETPLRFLGQYYDDETGLAYNRYRYYDPAVGRYIS 1117 Query: 298 QDPIGLKGGWNFYQYPLN-PVQYIDSMGLASKYGHLNNGGYGARPNKPPTPDPSKLPDIA 356 DP+GL GG N + Y N P + +D GL G A N P + Sbjct: 1118 VDPVGLLGGQNGFSYAGNRPTKMVDPTGLMFSTTT---GRKDANGNPLPDIQGKSSTVQS 1174 Query: 357 KQLRLPYPIDQASSAPNVFKTF 378 P D S++ FK Sbjct: 1175 DDDLDPALRDAVSNSREKFKDP 1196 Score = 61.7 bits (148), Expect = 6e-08, Method: Composition-based stats. Identities = 39/188 (20%), Positives = 62/188 (32%), Gaps = 31/188 (16%) Query: 9 RDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHR------------YHYDSQHRLVHY 56 LYRYD HG L E+TD T D R Y +D RL Sbjct: 490 NGGQTLYRYDDHGNLIERTDPTGAVTQYTYDYWGRRQSMLDASGAMVTYAHDDAGRLRSE 549 Query: 57 TRTQYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQ 116 +RY YDP G T + Y +R+ + Sbjct: 550 RTPDGG----VTRYEYDPSGN------------CTSIWHPNGHTTTHRYA-GYNRIVETR 592 Query: 117 NDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQM 176 RI Y+ L+ V + GE+ + R + A + + DG ++ + + Sbjct: 593 EPDGRISK-YRYNREGRLVEVHNSHGEVHRI-RLNAARLVSEEITFDGRTLRYRYDAMGR 650 Query: 177 LDRLESEI 184 + + E+ + Sbjct: 651 VVQFENGL 658 Score = 50.6 bits (119), Expect = 1e-04, Method: Composition-based stats. Identities = 49/284 (17%), Positives = 76/284 (26%), Gaps = 36/284 (12%) Query: 17 YDRHGRLTEKTDLIPEGVIRTDDERTHRYH-YDSQHRLVHYTRTQYAEPLVESRYLYDPL 75 YD G L TD D R D+ R+ + R DP Sbjct: 395 YDAWGNLLSFTDATGATTRWERDARGRELRITDALGRVTTFERDADGHIRRAV----DPA 450 Query: 76 ------GRRVAKRVWRRERDLTGWMSLSRKPQVTW----------YGWDGDRLTTIQNDR 119 GR VWR T + R+ T Y +D + D Sbjct: 451 GGVIETGRLTGGLVWRDAIGATFEVHFDRRGLTTRTVAPNGGQTLYRYDDHGNLIERTDP 510 Query: 120 TRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLV---QM 176 T T Y + + T A L+ DGG + Sbjct: 511 TGAVTQYTYDYWGR-RQSMLDASGAMVTYAHDDAGRLRSERTPDGGVTRYEYDPSGNCTS 569 Query: 177 LDRLESEILADRVS-----EESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGL 231 + R + E+R + ++ V+ ++H + L Sbjct: 570 IWHPNGHTTTHRYAGYNRIVETREPDGRISKYRYNREGRLVEVHNSHGEVHRIRLNAARL 629 Query: 232 PLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQYD 275 ++ +G T YD G ++ EN + G YD Sbjct: 630 VSEEITFDGRTL-RYRYDAMGRVVQFENGLGEK-----TGYVYD 667 Score = 49.4 bits (116), Expect = 3e-04, Method: Composition-based stats. Identities = 55/337 (16%), Positives = 86/337 (25%), Gaps = 80/337 (23%) Query: 6 RIARDAHYLYRYDRHGRLTEKTDLIPEGV------------IRTDDERTHRYHYDSQHRL 53 R Y YD G T R D R +Y Y+ + RL Sbjct: 550 RTPDGGVTRYEYDPSGNCTSIWHPNGHTTTHRYAGYNRIVETREPDGRISKYRYNREGRL 609 Query: 54 VHY-----------------TRTQYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSL 96 V + RY YD +GR V E+ + + Sbjct: 610 VEVHNSHGEVHRIRLNAARLVSEEITFDGRTLRYRYDAMGRVVQFENGLGEKTGYVYDLV 669 Query: 97 SRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQPGSFTPLIR-------------------V 137 R + + DG T ++ I + P R V Sbjct: 670 GRVVEHQY--PDGGVETFEYDELDYIIAAHGPSGDIFFERNLLGWVTCERQVSGGETFSV 727 Query: 138 ETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSEESRRWL 197 ET + R + Q+ D V + + ++ D + E+ R+L Sbjct: 728 ETKHDLMGNVVERKTSRGHHQTWVLDVAGRALR---VTLDGDEQLGVVRDALGRETARYL 784 Query: 198 ASCGLT------VEQMQNQMDPVYTPARKIHLYHCDHRGL-PLALV-------------- 236 G +++M + + D G P L Sbjct: 785 PGGGRVDVVYDGLDRMVQRTVSRGVAGPVVAAGQPDWIGALPHDLTLRQSVHYTPQGDVA 844 Query: 237 ----STEGATEWCAEYDEWGNLLNEENPHQLQQLIRL 269 GA W E+D G +L H + R Sbjct: 845 AIDDDRSGAERW--EHDPRGQVLARTGVHGQGEHFRY 879 Score = 48.3 bits (113), Expect = 6e-04, Method: Composition-based stats. Identities = 49/262 (18%), Positives = 73/262 (27%), Gaps = 32/262 (12%) Query: 18 DRHGRLTEKTDLIPEGVIRT--DDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYLYDPL 75 D G E RT + Y YD L+ T A ++Y YD Sbjct: 467 DAIGATFEVHFDRRGLTTRTVAPNGGQTLYRYDDHGNLIERTDPTGA----VTQYTYDYW 522 Query: 76 GRRVAK-----RVWRRERDLTGWMSLSRKPQ--VTWYGWDGDRLTTIQNDRTRIQTIYQP 128 GRR + + D G + R P VT Y +D T T ++ Sbjct: 523 GRRQSMLDASGAMVTYAHDDAGRLRSERTPDGGVTRYEYDPSGNCTSIWHPNGHTTTHRY 582 Query: 129 GSFTPLIRVETATGELA--KTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILA 186 + ++ G ++ + R + S GE + LV + L Sbjct: 583 AGYNRIVETREPDGRISKYRYNREGRLVEVHNSHGEVHRIRLNAARLVSEEITFDGRTLR 642 Query: 187 DRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWCA 246 R R GL + Y D G + +G Sbjct: 643 YRYDAMGRVVQFENGLGEKTG----------------YVYDLVGRVVEHQYPDGG-VETF 685 Query: 247 EYDEWGNLLNEENPHQLQQLIR 268 EYDE ++ P R Sbjct: 686 EYDELDYIIAAHGPSGDIFFER 707 Score = 45.6 bits (106), Expect = 0.005, Method: Composition-based stats. Identities = 55/330 (16%), Positives = 96/330 (29%), Gaps = 69/330 (20%) Query: 14 LYRYDRHGRLTEKTDLIPEGVIRTDDERTH-----------RYHYDSQHRLVHYTRTQYA 62 YRYD G L D + T + + YD + R V T A Sbjct: 266 RYRYDDAGDLVLAEDAMGAATRYTYTDHLLTCQEHPTGLCFYFVYDGEGRCVE---TWGA 322 Query: 63 EPLVE-SRYLYD-----PLGRRVAKRVWRR--ERDLTGWMSLSRKPQVTWY--------- 105 P E D G AK ++ E ++ + V + Sbjct: 323 YPGREDESLAADVPAVLADGITAAKGIFHTKLEYGPHNYVEAADSISVERFFGNDFGSVD 382 Query: 106 -----------GWDGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLAD 154 +D D T T ++ + +R+ A G T R Sbjct: 383 KAVTAAGVFCRTYDAWGNLLSFTDATGATTRWERDARGRELRITDALG-RVTTFERDADG 441 Query: 155 TLQQSGGEDGGSVVFPPVLVQMLDRLE----SEILADRVSEESRRWLASCGLTVEQMQNQ 210 ++++ GG + + ++ R E+ DR +R + G T+ + + Sbjct: 442 HIRRAVDPAGGVIETGRLTGGLVWRDAIGATFEVHFDRRGLTTRTVAPNGGQTLYRYDDH 501 Query: 211 MDPVYT--PARKIHLYHCDHRGLPLALVSTEGATEW--------------------CAEY 248 + + P + Y D+ G +++ GA EY Sbjct: 502 GNLIERTDPTGAVTQYTYDYWGRRQSMLDASGAMVTYAHDDAGRLRSERTPDGGVTRYEY 561 Query: 249 DEWGNLLNEENPHQLQQLIRLPGQQYDEES 278 D GN + +P+ R G E+ Sbjct: 562 DPSGNCTSIWHPNGHTTTHRYAGYNRIVET 591 >UniRef50_C9RZN2 YD repeat protein n=2 Tax=Geobacillus RepID=C9RZN2_GEOSY Length = 678 Score = 173 bits (437), Expect = 2e-41, Method: Composition-based stats. Identities = 70/316 (22%), Positives = 106/316 (33%), Gaps = 30/316 (9%) Query: 14 LYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYLYD 73 YRYD +G TE I T Y YD+ +LV Y YD Sbjct: 275 TYRYDENGNRTE---------IATPTGAKTLYRYDALDQLVEEQWPDG----TTIAYTYD 321 Query: 74 PLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQPGSFTP 133 G R + + T + Q+ +G + N Q Y+ Sbjct: 322 GFGNRKQIVKTKDGQSTTTTADYNAANQLVRFGDETITYDANGNRVEDGQYRYEWNEADQ 381 Query: 134 LIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSEES 193 L+ + + D + +G + D L D Sbjct: 382 LVSITRKGESTPFVTYQYDEDGRRIQKNVNGVITNYHY----QGDSLNVLYETDASGNVV 437 Query: 194 RRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGN 253 R ++ + M+ + YH + G +AL +G +YD GN Sbjct: 438 RSYIYGENGQLLAMKK--------GNATYFYHYNTHGDVIALTDEQGNIVARYQYDARGN 489 Query: 254 LLNEENPHQLQQLIRLPGQQYDEESGLYYNRHRYYDPLQGRYITQDPI-GLKGGW---NF 309 +L++ + R G QYD+E+GLYY RYY P G +++ DP G N Sbjct: 490 ILSQSGALADENPYRYAGYQYDQETGLYYLIARYYHPEHGVFLSLDPDPGDADDLLTQNG 549 Query: 310 YQYP-LNPVQYIDSMG 324 Y Y NPV ++D G Sbjct: 550 YAYANNNPVMFVDPDG 565 Score = 62.9 bits (151), Expect = 3e-08, Method: Composition-based stats. Identities = 40/248 (16%), Positives = 76/248 (30%), Gaps = 38/248 (15%) Query: 3 PDNRIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYA 62 N++ R YD +G E + +RY ++ +LV TR + Sbjct: 346 AANQLVRFGDETITYDANGNRVE--------------DGQYRYEWNEADQLVSITRKGES 391 Query: 63 EPLVESRYLYDPLGRRVAKRVWRRERDL----------TGWMSLSRKPQVTWYGWDGDRL 112 P V Y YD GRR+ K V + + + YG +G +L Sbjct: 392 TPFVT--YQYDEDGRRIQKNVNGVITNYHYQGDSLNVLYETDASGNVVRSYIYGENG-QL 448 Query: 113 TTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPV 172 ++ Y + + +A+ Q + + L QSG + Sbjct: 449 LAMKKGNATYFYHYNTHGDV-IALTDEQGNIVARYQYDARGNILSQSGALADEN------ 501 Query: 173 LVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLP 232 + + +R + G+ + + D + + Y + P Sbjct: 502 -PYRYAGYQYDQETGLYYLIARYYHPEHGVFLSLDPDPGDADDLLTQNGYAYANN---NP 557 Query: 233 LALVSTEG 240 + V +G Sbjct: 558 VMFVDPDG 565 Score = 53.3 bits (126), Expect = 2e-05, Method: Composition-based stats. Identities = 40/296 (13%), Positives = 74/296 (25%), Gaps = 54/296 (18%) Query: 7 IARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLV 66 + + Y YD RL + + + + Y YD + Sbjct: 25 VKKGNQKEYTYDLSDRLKQ---------LLLANGTSVNYDYDVNGNMTSKVIRTSDGQSQ 75 Query: 67 ESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTIY 126 Y YD G+ L + Y +G+++ T+ IQ Y Sbjct: 76 TFAYSYDAAGK------------LMKTVGPLHDVTTNEYDANGNKIKTVLPKGNTIQWTY 123 Query: 127 QPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILA 186 I + + ++Q + F + + Sbjct: 124 DGTERVKTISYNNVPYYEFRYDQNGNELSVQYVKDGTTKTRKFDSANRVIEQSDRGGLQK 183 Query: 187 ---DRVSEESRRWLASCGLTVEQMQNQ-----MDPVYTPARKIHLYHCDHRGLPLALVST 238 S++ ++++ S G + + Q + V + + D RG + Sbjct: 184 WTYPTTSDKLQQFMFSHGSFSQTVTYQYNALDQNTVVQDGTYTYRFDYDERGNVRTFTTG 243 Query: 239 EGA-------------------------TEWCAEYDEWGNLLNEENPHQLQQLIRL 269 GA YDE GN P + L R Sbjct: 244 NGAGSTFTYDDRGLVESVSVGTADGTEIVSETYRYDENGNRTEIATPTGAKTLYRY 299 >UniRef50_B7GLY4 Rhs family protein n=3 Tax=Anoxybacillus flavithermus WK1 RepID=B7GLY4_ANOFW Length = 563 Score = 172 bits (436), Expect = 2e-41, Method: Composition-based stats. Identities = 75/345 (21%), Positives = 116/345 (33%), Gaps = 48/345 (13%) Query: 14 LYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYLYD 73 YRYD +G T+ E ++ Y YD+ +LV + Y YD Sbjct: 121 TYRYDENGNRTKIESPTGEAIV---------YRYDALDQLVEEQWPDG----TKIEYTYD 167 Query: 74 PLGRR--VAKRVWRRERDLTGWMSLSRK-----PQVTWYGWDGDRLTTIQNDRTRIQTIY 126 G R + K + T + + + + Y +G+RL Q Y Sbjct: 168 GFGNRKQIVKTKDGQSTTTTADYNAANQLVRFGDETITYDANGNRLED-------GQYQY 220 Query: 127 QPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILA 186 + + L+ + + D + G + D L Sbjct: 221 EWNAADQLVSITRKGESTPFVTYQYDEDGRRIQKTVSGVVTNYHY----QGDSLNVLYET 276 Query: 187 DRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWCA 246 D + ++ + M+ + YH + G +AL +G Sbjct: 277 DASGNVVQSYVYGENGQLLAMKKGGA--------TYFYHYNAHGDVIALTDAQGNVVARY 328 Query: 247 EYDEWGNLLNEENPHQLQQLIRLPGQQYDEESGLYYNRHRYYDPLQGRYITQDPI-GLKG 305 EYD WG + ++ + R G QYDEE+GLYY RYY P G +++ DP G Sbjct: 329 EYDTWGQIRSQTGVLADENPYRYAGYQYDEETGLYYLMARYYHPTHGVFLSLDPDPGDAD 388 Query: 306 GW---NFYQYP-LNPVQYIDSMG----LASKYGHLNNGGYGARPN 342 N Y Y NPV +D G +A G GY A Sbjct: 389 DILTQNGYTYANNNPVMLVDPDGHFVWMAINAGFAAYDGYKAFKK 433 Score = 71.4 bits (173), Expect = 8e-11, Method: Composition-based stats. Identities = 46/265 (17%), Positives = 81/265 (30%), Gaps = 44/265 (16%) Query: 3 PDNRIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYA 62 N++ R YD +G E + ++Y +++ +LV TR + Sbjct: 192 AANQLVRFGDETITYDANGNRLE--------------DGQYQYEWNAADQLVSITRKGES 237 Query: 63 EPLVESRYLYDPLGRRVAKRVWRRERDL----------TGWMSLSRKPQVTWYGWDGDRL 112 P V Y YD GRR+ K V + + Q YG +G L Sbjct: 238 TPFVT--YQYDEDGRRIQKTVSGVVTNYHYQGDSLNVLYETDASGNVVQSYVYGENGQLL 295 Query: 113 TTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPV 172 + T Y + +I + A G + ++ G + Sbjct: 296 AMKKGGAT---YFYHYNAHGDVIALTDAQGNVVARYEYDTWGQIRSQTGVLADENPYRYA 352 Query: 173 LVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLP 232 Q + L R + + G+ + + D + + Y + P Sbjct: 353 GYQYDEETGLYYLMARY------YHPTHGVFLSLDPDPGDADDILTQNGYTYANN---NP 403 Query: 233 LALVSTEGATEW------CAEYDEW 251 + LV +G W A YD + Sbjct: 404 VMLVDPDGHFVWMAINAGFAAYDGY 428 >UniRef50_A7BPL6 Protein containing RHS repeats n=2 Tax=Beggiatoa sp. PS RepID=A7BPL6_9GAMM Length = 2594 Score = 172 bits (436), Expect = 2e-41, Method: Composition-based stats. Identities = 75/326 (23%), Positives = 123/326 (37%), Gaps = 35/326 (10%) Query: 14 LYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYLYD 73 Y D+ GR+T+K + + T Y YD RLV T+ +V +Y YD Sbjct: 2168 QYTRDKLGRITQKVETL------EGVNTTDVYGYDPAGRLVTVTQ----NGVVTEQYTYD 2217 Query: 74 PLGRRVAKRVWRRERDLTGWMSLSR----KPQVTWYGWDGDRLTTIQNDRTRIQTIYQPG 129 G R+ + R Y +G+ LT ++ Y+ Sbjct: 2218 ANGNRLTANTTTYGEVNGRYDEQDRLLEYGGNTYTYTANGELLTKNESGAIT---EYEYD 2274 Query: 130 SFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRV 189 L V+ TQ + D + G+ + L Q +E+ ++ Sbjct: 2275 VLGNLRSVQLPD----STQIEYVIDGRNRRIGKKINGQLVQGFLYQGALNPIAELDSNGN 2330 Query: 190 SEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVS-TEGATEWCAEY 248 + + + ++N K + DH G P ++ T+G+ +Y Sbjct: 2331 VVSIFIYGSKINVPDYMLKNG---------KTYRILSDHLGSPRLVIDITDGSVVQHMDY 2381 Query: 249 DEWGNLLNEENPHQLQQLIRLPGQQYDEESGLYYNRHRYYDPLQGRYITQDPIGLKGG-W 307 D +GN+L++ NP Q G YD +GL R Y+P GR+ +DPI GG Sbjct: 2382 DTFGNILSDSNPGF--QPFGFAGGLYDVNTGLIRFGARDYEPEIGRWTAKDPILFDGGDT 2439 Query: 308 NFYQYPLN-PVQYIDSMGLASKYGHL 332 N Y Y +N P+ ++D GL G + Sbjct: 2440 NLYGYVVNDPINFVDLFGLKVDTGKI 2465 Score = 51.3 bits (121), Expect = 8e-05, Method: Composition-based stats. Identities = 63/387 (16%), Positives = 101/387 (26%), Gaps = 96/387 (24%) Query: 12 HYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYL 71 + YRY+ GRL T+ +T +YD+Q + T +S Sbjct: 1883 DFQYRYNERGRLAMLTEGEGATA------KTVTINYDNQGNISTLTDML----TRQSSLA 1932 Query: 72 YDPLGRRVAKRVWRRERDLTGWMSLSRKPQVT-------WYGWDGDRLTTIQN-----DR 119 YD +GR +++ + + + + + +T + + L Sbjct: 1933 YDAVGRVISQTLPDQRQIDYSYDANDNVTSITPPKRPVHHFAYTEQELLKRYTPPAVAGV 1992 Query: 120 TRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLV---QM 176 T QT Y+ LI+V G+ + L +G Sbjct: 1993 TTPQTDYEYNLDKQLIKVVRPGGQNMVFNYGATTGRLDGMTLPNGQRQYAYDANTGHLVT 2052 Query: 177 LDRLESEILA---DRVSEESRRWL-----ASCGLTVEQMQNQMDPVYTPARKIHL-YHCD 227 + ++ L+ D S W LT + I+ Y D Sbjct: 2053 ITGIDGGTLSYSYDGFLPLSETWNNGTIQGKLSLTYDNDFRVTATRINEDNSINYQYDAD 2112 Query: 228 HR----GLPLALVSTE---------GATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQ- 273 G + G Y+ +G L N + Q Sbjct: 2113 SLLINAGDLSLTRDAQNGLLTGTQLGNITTQHTYNPFGELA--SNTASNSGNVLYSNQYT 2170 Query: 274 ------------------------YDE--------------ESGLYY-NRHR------YY 288 YD E Y N +R Y Sbjct: 2171 RDKLGRITQKVETLEGVNTTDVYGYDPAGRLVTVTQNGVVTEQYTYDANGNRLTANTTTY 2230 Query: 289 DPLQGRYITQDPIGLKGGWNFYQYPLN 315 + GRY QD + GG N Y Y N Sbjct: 2231 GEVNGRYDEQDRLLEYGG-NTYTYTAN 2256 >UniRef50_Q8GDM7 Rhs n=3 Tax=Photorhabdus RepID=Q8GDM7_PHOLU Length = 1469 Score = 172 bits (436), Expect = 2e-41, Method: Composition-based stats. Identities = 78/333 (23%), Positives = 117/333 (35%), Gaps = 84/333 (25%) Query: 3 PDNRIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYA 62 +R+ + + YDR GR+ EK L + +Y ++SQ++L Sbjct: 1097 EGHRLNWVDSHRFVYDRAGRMQEKQFLAEGCRLAL-----TKYRWNSQNQLTGIITPDG- 1150 Query: 63 EPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRI 122 + Y YD GRR KR + + T Y WDGD Sbjct: 1151 ---IPWEYRYDAFGRRTEKRCIQ-------------SGKRTTYVWDGDV----------- 1183 Query: 123 QTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLES 182 + K R + D Sbjct: 1184 -----------PAEIREYQHGRLKMVRHLVFDG--------------------------- 1205 Query: 183 EILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGAT 242 + ++++++ + + VE M ++ Y + G PLAL G Sbjct: 1206 ---WELIAQQTQAFTLNLDNRVELMAGEVQTQYAVSAPT--------GEPLALFDPTGKR 1254 Query: 243 EWCA-EYDEWG-NLLNEENPHQLQQLIRLPGQQYDEESGLYYNRHRYYDPLQGRYITQDP 300 W + +G L QL +R GQ +DEESGL+YNR RYY P Y++ DP Sbjct: 1255 VWRRPKQSLYGLRLSGHGENPQLDPGLRFAGQLFDEESGLFYNRFRYYLPEAACYLSPDP 1314 Query: 301 IGLKGGWNFYQYPLNPVQYIDSMGLASKYGHLN 333 +GL GG N Y Y NP +ID +GLA + Sbjct: 1315 LGLNGGPNPYAYVHNPANWIDPLGLAGCPTDYS 1347 Score = 61.0 bits (146), Expect = 1e-07, Method: Composition-based stats. Identities = 41/199 (20%), Positives = 66/199 (33%), Gaps = 44/199 (22%) Query: 3 PDNRIARDAHYLYRYDRHGRLTEKTDLIPEG------------VIRTDDERTHRYHYDSQ 50 PDN++ + +DRHG LT TD R + +Y YD+ Sbjct: 736 PDNQLE-----HFTHDRHGNLTCWTDARGVEWQVEYGPFDLPVARRDGEGHRWQYRYDAD 790 Query: 51 H-RLVHYTRTQYAE-----------------PLVESRYLYDPLGRRVAKR-----VWRRE 87 +L Q + Y YD G + KR V R + Sbjct: 791 TLQLTQVINPQGETYTYTLDADGRVITEQDYAGTQWHYRYDRSGNCIEKRDGEENVTRYD 850 Query: 88 RDLTGWMSLSRKPQ-VTWYGWD-GDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELA 145 D ++ P+ T Y +D RL T+++ + + Y ++R GE+ Sbjct: 851 YDAARRLTTLLAPEGTTRYHYDILGRLLTVESPDSALHFEYDEQ--GRIVREIQPHGEIL 908 Query: 146 KTQRRSLADTLQQSGGEDG 164 + + A Q GE Sbjct: 909 RHYPDNRAVERQLLTGEKT 927 Score = 56.0 bits (133), Expect = 3e-06, Method: Composition-based stats. Identities = 56/259 (21%), Positives = 82/259 (31%), Gaps = 41/259 (15%) Query: 13 YLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYLY 72 YD+H RL D ++ RT YDSQ RL T R+ Y Sbjct: 679 RTQEYDKHQRLVRVLD---------EENRTVSLGYDSQDRLRSLT-----AAGALWRWRY 724 Query: 73 DPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQPGSFT 132 D R + + + + G+ Q Y P Sbjct: 725 D------------RHHRVAVSDRPDNQLEHFTHDRHGNLTCWTDARGVEWQVEYGPFDL- 771 Query: 133 PLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSEE 192 P+ R + GE + Q R ADTLQ + + + L + + A Sbjct: 772 PVARRD---GEGHRWQYRYDADTLQLTQVINPQGETYTYTLDADGRVITEQDYAGTQWHY 828 Query: 193 SRRWLASCGLTVEQMQNQMDPVYTPARKIHL---------YHCDHRGLPLALVSTEGATE 243 +C + +N Y AR++ YH D G L + S + A Sbjct: 829 RYDRSGNCIEKRDGEENVTRYDYDAARRLTTLLAPEGTTRYHYDILGRLLTVESPDSAL- 887 Query: 244 WCAEYDEWGNLLNEENPHQ 262 EYDE G ++ E PH Sbjct: 888 -HFEYDEQGRIVREIQPHG 905 Score = 52.1 bits (123), Expect = 5e-05, Method: Composition-based stats. Identities = 50/293 (17%), Positives = 88/293 (30%), Gaps = 30/293 (10%) Query: 4 DNRIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAE 63 ++R D + Y+ H +LT+ D Y+ + +L RT Sbjct: 413 EHRDVYDNRLRFIYNEHSQLTQALHS---------DGPELTLLYNRRGQLTEILRTDEGL 463 Query: 64 PLVESRYLYDPLGRRVA-----KRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQND 118 V +RY Y GR E + G +S TW + D+ + Sbjct: 464 QEVMARYHYHDNGRLAEADSAQHFHLYYEYNAQGLISRWSDGDQTWVDYRYDKQGRCTDS 523 Query: 119 RTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLD 178 + P I T T + + + GG + L Sbjct: 524 VGAGGYYPVHLDYAPGITRSTTPQGHTTTWHYNDQQLITEIHTPRGGVTRYDYDRWGHLV 583 Query: 179 RLESE----------ILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDH 228 R S RV+ + A + E Q+ + P ++ L D Sbjct: 584 RQISPEGETLTLTYLADTGRVTSLTEATGAVWQYSYEADSLQLTGMTDPLQRTWLPQYDE 643 Query: 229 RGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEESGLY 281 +G P ++ +G + +G + E +P + Q+YD+ L Sbjct: 644 QGQPAGFIAPDGRKT-TLTRNAFGLVTAETDPDGNCRT-----QEYDKHQRLV 690 >UniRef50_B4UIF2 YD repeat protein n=1 Tax=Anaeromyxobacter sp. K RepID=B4UIF2_ANASK Length = 2350 Score = 171 bits (434), Expect = 4e-41, Method: Composition-based stats. Identities = 81/334 (24%), Positives = 120/334 (35%), Gaps = 37/334 (11%) Query: 15 YRY----DRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRY 70 Y Y D GR+T K++ I T Y YD RL R + + Y Sbjct: 1934 YAYAVSRDASGRITGKSETIQ------GTTATWVYGYDDAGRLTTVRR----DGRQVASY 1983 Query: 71 LYDPLGRRVAKRVWRRERDLTGWMS---LSRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQ 127 YD G R+ + + R + + YG +G+ + RT Y Sbjct: 1984 GYDDNGNRLLRTIERGTESGSYDDQDRLATYGGYTFSYGANGELASRSAGGRTTW---YD 2040 Query: 128 PGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILAD 187 L V G L + + D L + G+ L + +L D Sbjct: 2041 YDPLGNLRAVRLPDGALLEY----VVDGLNRRVGKKVNGAQLEGFLYE--GQLRPVAWLD 2094 Query: 188 RVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTE-GATEWCA 246 + R++ + V + A + DH G P +V+ GA Sbjct: 2095 GSGQVYARFVYGLHVNVPEY-------MVTAAGTFRFLTDHLGSPRLVVNASTGAVVQRI 2147 Query: 247 EYDEWGNLLNEENPHQLQQLIRLPGQQYDEESGLYYNRHRYYDPLQGRYITQDPIGLKGG 306 +YDEWG +L + NP Q G YD ++GL R YDP GR+ +D +GG Sbjct: 2148 DYDEWGQVLADSNPGF--QPFGFAGGLYDRDTGLVRFGARDYDPTVGRWTAKDRSRFRGG 2205 Query: 307 WNFYQY-PLNPVQYIDSMGLASKYGHLNNGGYGA 339 NFY+Y +PV ++D G G GA Sbjct: 2206 LNFYEYAASDPVNFVDPTGNYFAPPPAAGVGIGA 2239 Score = 45.9 bits (107), Expect = 0.003, Method: Composition-based stats. Identities = 38/232 (16%), Positives = 65/232 (28%), Gaps = 30/232 (12%) Query: 6 RIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPL 65 R+A Y + Y +G L R+ RT Y YD L A Sbjct: 2010 RLATYGGYTFSYGANGELAS----------RSAGGRTTWYDYDPLGNLRAVRLPDGA--- 2056 Query: 66 VESRYLYDPLGRRVAKRVWRRERDLTGWMS-------LSRKPQVT-WYGWDGDRLTTIQN 117 Y+ D L RRV K+V + + + L QV + + Sbjct: 2057 -LLEYVVDGLNRRVGKKVNGAQLEGFLYEGQLRPVAWLDGSGQVYARFVYGLHVNVPEYM 2115 Query: 118 DRTRIQTIY-QPGSFTPLIRVETATGELAKTQRRSLADTL-------QQSGGEDGGSVVF 169 + +P + V +TG + + + Q G GG Sbjct: 2116 VTAAGTFRFLTDHLGSPRLVVNASTGAVVQRIDYDEWGQVLADSNPGFQPFGFAGGLYDR 2175 Query: 170 PPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKI 221 LV+ R + +++ R+ + ++ V Sbjct: 2176 DTGLVRFGARDYDPTVGRWTAKDRSRFRGGLNFYEYAASDPVNFVDPTGNYF 2227 Score = 45.6 bits (106), Expect = 0.004, Method: Composition-based stats. Identities = 55/321 (17%), Positives = 83/321 (25%), Gaps = 47/321 (14%) Query: 3 PDNRI----ARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTR 58 P R+ + YD GRL I T D + + YD T Sbjct: 1796 PAGRLSSLTTQYGTSSVGYDTSGRLAS---------IVTHDGPSLSWTYDGHLPSSETTT 1846 Query: 59 TQYAEPLVES------------------RYLYDPLG-------RRVAKRVWRRERDLTGW 93 + +V Y YD G R+A+ T Sbjct: 1847 GESVTGIVGWSYDNDFRIATSAVNGVPVSYQYDADGLLTYAGALRIARDPSTGMISGTTL 1906 Query: 94 MSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLA 153 S+S YG D +R + + + T Sbjct: 1907 GSVSTSAGYDAYG-DLERFAASAGGISAYAYAVSRDASGRITGKSETIQGTTATWVYGYD 1965 Query: 154 DTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVS---EESRRWLASCGLTVEQMQNQ 210 D + + G V +RL I S ++ R G T N Sbjct: 1966 DAGRLTTVRRDGRQVASYGYDDNGNRLLRTIERGTESGSYDDQDRLATYGGYTFSYGANG 2025 Query: 211 MDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRLP 270 + + Y D G A+ +GA + + N QL+ + Sbjct: 2026 ELASRSAGGRTTWYDYDPLGNLRAVRLPDGALLEYVVDGLNRRVGKKVNGAQLEGFL-YE 2084 Query: 271 GQQ----YDEESGLYYNRHRY 287 GQ + + SG Y R Y Sbjct: 2085 GQLRPVAWLDGSGQVYARFVY 2105 Score = 43.3 bits (100), Expect = 0.022, Method: Composition-based stats. Identities = 49/282 (17%), Positives = 80/282 (28%), Gaps = 39/282 (13%) Query: 9 RDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVES 68 + Y YD +G + +T + P G+ H + +D+ RLV T + Sbjct: 1442 KGESRHYVYDANGLM--QTYMDPRGL-------AHAFEHDALGRLVLDTNPAGGSKTLSR 1492 Query: 69 RYL---Y-----DPLGRRVAK-----------RVWRRERDLTGWMSLSRKPQVTWYGWDG 109 Y LGR R R + S + + T DG Sbjct: 1493 TDRPGGYAVSVTTALGRTTVHDVQGVSAGQEVRTLTRPDGTGTTTTASARGERTTSASDG 1552 Query: 110 DRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVF 169 + G +PL T++ S ++ D SV Sbjct: 1553 TSTAETLGPDPQF------GMQSPLAATNAVILPSGLTRQHSRTASVVLQDPADPFSVTS 1606 Query: 170 PPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDP--VYTPARKIHLYHCD 227 V + R + D V+ A+ + P + P + + D Sbjct: 1607 RSDRVTVNGRTTTSTY-DVVTRTIVTTSAAGRKRTTVLDALGRPATLQLPGIERLAFQHD 1665 Query: 228 HRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRL 269 G A+V +G EYD G +P +R Sbjct: 1666 SSGRLQAVV--QGTRIATLEYDSAGRPWRVTDPIGRTTELRY 1705 >UniRef50_C5SIF6 YD repeat protein n=1 Tax=Asticcacaulis excentricus CB 48 RepID=C5SIF6_9CAUL Length = 800 Score = 171 bits (434), Expect = 4e-41, Method: Composition-based stats. Identities = 77/367 (20%), Positives = 131/367 (35%), Gaps = 60/367 (16%) Query: 15 YRYDRHGRLTEKTDLIPEGVIRT------------DDERTHRYHYDSQHRLVHYTRTQYA 62 Y YD GRL TD+ ++ D + Y YDS +RL T + Sbjct: 240 YSYDGLGRLQSSTDMFGRTLVYGYNQASARTGMVFPDGKNQYYAYDSTNRLT---YTDVS 296 Query: 63 EPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQ---NDR 119 V Y+ G+ A+ + G+ + R+ +V ++ D R T N Sbjct: 297 GSGVALYIKYNNKGKVEAQSRSNGTTSIFGYDGMGRRSEVRFHFPDSTRNTLWTLGYNPA 356 Query: 120 TRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTL--------QQSGGEDGGSVVFPP 171 ++I + + RV T + + T+ ++ + GS + Sbjct: 357 SQITNVSGTNTDAFDYRVPTGAADYRAFDGLNRDATVASVIGGYDRRGNLSNDGSRIMTY 416 Query: 172 VLVQMLDRLESEILADRVSEESRRWLA---SCGLTVEQMQNQMDPVY------------- 215 L L L S ++ ++ + +A + GLT + + + D + Sbjct: 417 DLFNRLISLNSNGMSLTITYDPEGRIASYTANGLTTQFLHDGSDLIAEFNASGDVARRYL 476 Query: 216 ----------------TPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEEN 259 + +H +++G + L GA +Y +G N + Sbjct: 477 HGVNEDDPWAELVGASVSPASVSYFHTNYQGSIVGLSDGFGALTETYKYGPYGEPRNASD 536 Query: 260 PHQLQ-QLIRLPGQQYDEESGLYYNRHRYYDPLQGRYITQDPIGLKGGWNFYQYP-LNPV 317 R GQ E+ LYY + R YDPLQGR++ DPIG K N Y Y +P+ Sbjct: 537 QLTFAGTRFRYTGQTVLPEAQLYYYKARVYDPLQGRFLQTDPIGTKDDLNLYAYVAGDPI 596 Query: 318 QYIDSMG 324 +D G Sbjct: 597 NKVDPKG 603 Score = 46.3 bits (108), Expect = 0.002, Method: Composition-based stats. Identities = 43/302 (14%), Positives = 75/302 (24%), Gaps = 56/302 (18%) Query: 9 RDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEP---- 64 R A Y Y +G++ D + R YD RL P Sbjct: 100 RRAARTYTYSPNGKIIHLIDS---------NGNRTRLSYDGYDRLSSLNYPDAGRPSNFD 150 Query: 65 ----------------LVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWD 108 Y YD G R W+ T Y Sbjct: 151 SSTPQSAIATAGDINVQDTEWYEYDANGNRTR------------WVRRDGNIVRTTYDAL 198 Query: 109 GDRLTTIQNDRTRIQTIY-QPGSFTPLIRVE-TATGELAKTQRRSLADTLQQSGGEDGGS 166 ++ I + + IY +++ + LQ S G + Sbjct: 199 NRQVVQIHENGNLSRPIYTSYDLVGHVVKKRFDHWDGPGVSYSYDGLGRLQSSTDMFGRT 258 Query: 167 VVFPP------VLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPAR- 219 +V+ + D D + + ++ G+ + N V +R Sbjct: 259 LVYGYNQASARTGMVFPDGKNQYYAYDSTNRLTYTDVSGSGVALYIKYNNKGKVEAQSRS 318 Query: 220 --KIHLYHCDHRGLPLALV----STEGATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQ 273 ++ D G + + T W Y+ + N + R+P Sbjct: 319 NGTTSIFGYDGMGRRSEVRFHFPDSTRNTLWTLGYNPASQITNVSGTNTDAFDYRVPTGA 378 Query: 274 YD 275 D Sbjct: 379 AD 380 >UniRef50_C6CPH2 YD repeat protein n=11 Tax=Enterobacteriaceae RepID=C6CPH2_DICZE Length = 1423 Score = 171 bits (432), Expect = 6e-41, Method: Composition-based stats. Identities = 83/349 (23%), Positives = 123/349 (35%), Gaps = 63/349 (18%) Query: 4 DNRIARDAHYLYRYDRHGRLTE-KTDLIPEGVIRTDDERTH---------------RYHY 47 D + YRYD G LT + + EG R R+HY Sbjct: 998 DGHLLAAQTREYRYDGAGNLTGVRHNRDAEGYRLDATGRVQAVLSGGAGKPVDTLARFHY 1057 Query: 48 ------DSQHRLVHYTRTQYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQ 101 RL + + + ++ Y YD GR + K+V + +PQ Sbjct: 1058 TRTGLPQEAGRLTEWQSGRLVQHD-DTHYQYDRAGRLIRKQVVQ----------PGYRPQ 1106 Query: 102 VTWYGWDGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGG 161 V Y WD + + + + +Y+ F RV + A+ R Sbjct: 1107 VWQYRWDSRNQLRVVDTPSGERWLYRYDPFGR--RVGKRCDQKAEEIRYQ---------- 1154 Query: 162 EDGGSVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKI 221 + + + L R R W+ + V Q + + Sbjct: 1155 -------WDGDQIAEIRHYRHGQLVAR-----RHWVYNGWELVVQQRQHTGGDWETD--- 1199 Query: 222 HLYHCDHRGLPLALVSTEGATEWCA-EYDEWGNLLNEENPHQLQQLIRLPGQQYDEESGL 280 P AL + +G W A + WG E++ + GQ D ESGL Sbjct: 1200 -FVTSSQNSTPQALFTPDGTLRWQAPKATLWGQRQAEKSESPDPG-LAFAGQLRDSESGL 1257 Query: 281 YYNRHRYYDPLQGRYITQDPIGLKGGWNFYQYPLNPVQYIDSMGLASKY 329 YNR RYYDP G Y++ DPIG+ GG N Y Y NP+ +ID +GLA Sbjct: 1258 CYNRFRYYDPAGGCYVSPDPIGIAGGDNNYAYAPNPITWIDPLGLAGCS 1306 Score = 67.9 bits (164), Expect = 8e-10, Method: Composition-based stats. Identities = 44/264 (16%), Positives = 76/264 (28%), Gaps = 32/264 (12%) Query: 15 YRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYLYDP 74 YR D GRL E + Y YD+ HRL + + +RY YD Sbjct: 463 YRQDEQGRLVEADATHAYHLY---------YEYDAAHRLTRW----HDNDQTWARYEYDA 509 Query: 75 LGRRVAKR------VWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQP 128 GR V R + + Q + +G++ L + + T Y+ Sbjct: 510 QGRCVYTTCADGFLTARFDYLPDRVVMTDGLGQRSEFGFNDLHLMSWEQSPLGHVTRYEY 569 Query: 129 GSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADR 188 L+R + G + + + G + Q L + + Sbjct: 570 DEVGNLLREISPAGRVVEFGYLDDTGRVSTFTDASGHQWQYAYDDEQRLCGVTDPL---- 625 Query: 189 VSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWCAEY 248 W E++ + GL + G + +Y Sbjct: 626 --GREWGWAYDAEGNPERLTGPDASEVRFTWNRY-------GLLTQVSDAAGEVQARLQY 676 Query: 249 DEWGNLLNEENPHQLQQLIRLPGQ 272 D LL+ + + +R GQ Sbjct: 677 DHRQRLLSATDAESRTRQLRYDGQ 700 Score = 52.9 bits (125), Expect = 3e-05, Method: Composition-based stats. Identities = 46/304 (15%), Positives = 88/304 (28%), Gaps = 64/304 (21%) Query: 3 PDNRIARDAH-----YLYRYDRHGR----------LTEKTDLIPEGVIRTDD-ERTHRYH 46 +R+ R Y YD GR LT + D +P+ V+ TD + + Sbjct: 488 AAHRLTRWHDNDQTWARYEYDAQGRCVYTTCADGFLTARFDYLPDRVVMTDGLGQRSEFG 547 Query: 47 YDSQHRLVHYTRTQYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQV---- 102 ++ H L+ + ++ +RY YD +G + + G++ + + Sbjct: 548 FNDLH-LMSWEQSPLGH---VTRYEYDEVGNLLREISPAGRVVEFGYLDDTGRVSTFTDA 603 Query: 103 ----TWYGWDGD-RLTTIQNDRTR-IQTIYQP-------------------GSFTPLIRV 137 Y +D + RL + + R Y + L +V Sbjct: 604 SGHQWQYAYDDEQRLCGVTDPLGREWGWAYDAEGNPERLTGPDASEVRFTWNRYGLLTQV 663 Query: 138 ETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLE-SEILADRVSEESRRW 196 A GE+ + L + + + + + + ++ R+ W Sbjct: 664 SDAAGEVQARLQYDHRQRLLSATDAESRTRQLRYDGQDRVVQWQRADGARFRLGYRRASW 723 Query: 197 LASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGL-----------PLALVSTEGATEWC 245 L + + + D G A EG T W Sbjct: 724 TLPEQLIRPDDKEEQRQYDRHNNLLSYV--DGNGALWRQTFGPFDLLTARTDAEGRT-WH 780 Query: 246 AEYD 249 YD Sbjct: 781 YAYD 784 Score = 49.4 bits (116), Expect = 3e-04, Method: Composition-based stats. Identities = 55/309 (17%), Positives = 95/309 (30%), Gaps = 35/309 (11%) Query: 8 ARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVE 67 A D YRYD GRLTE + + YD + R+V ++ + Sbjct: 858 APDDTLHYRYDAVGRLTEVSSATAHV----------QLDYDLRDRVVR----EWHNGTLL 903 Query: 68 SRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQ 127 +R YD R V + + +L+ + Y G+ L +Q T+ Q Sbjct: 904 TR-QYDDTARTVTRTLTWDGDAGDTTGTLAPLTSLFHYTRTGE-LRQVQLPDGADLTLTQ 961 Query: 128 PGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILAD 187 + R + + T + SG + G ++ D + Sbjct: 962 DAAGRESHRRGGSGFVQQREYDVMGWLTREMSGAQHDGHLLAAQTREYRYDGAGNLTGVR 1021 Query: 188 RVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLA---LVS-TEGATE 243 + L + G + + H GLP L G Sbjct: 1022 HNRDAEGYRLDATGRVQAVLSGGAGKPVDTLARFHYTRT---GLPQEAGRLTEWQSGRLV 1078 Query: 244 W----CAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEESGLYYNRHRYYDPLQG-RYITQ 298 +YD G L+ ++ + ++D N+ R D G R++ + Sbjct: 1079 QHDDTHYQYDRAGRLIRKQVVQPGYRPQVWQ-YRWDS-----RNQLRVVDTPSGERWLYR 1132 Query: 299 -DPIGLKGG 306 DP G + G Sbjct: 1133 YDPFGRRVG 1141 Score = 48.6 bits (114), Expect = 5e-04, Method: Composition-based stats. Identities = 49/254 (19%), Positives = 73/254 (28%), Gaps = 42/254 (16%) Query: 14 LYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYLYD 73 +YD RL TD + RT + YD Q R+V + R A R Y Sbjct: 673 RLQYDHRQRLLSATDA---------ESRTRQLRYDGQDRVVQWQRADGA----RFRLGY- 718 Query: 74 PLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQPGSFTP 133 RR + + + + K + Y + L+ + + + + P F Sbjct: 719 ---RRASWTLPEQ------LIRPDDKEEQRQYDRHNNLLSYVDGNGALWRQTFGP--FDL 767 Query: 134 LIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILA-DRVSEE 192 L A G + L DG LD I D E Sbjct: 768 LTARTDAEGRTWHYAYDKESQQLTTVIAPDGSR------WQWWLDADGRVIRERDMTGTE 821 Query: 193 SRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWG 252 + GL + + D + D RGL L + + YD G Sbjct: 822 THYGYDEDGLCISVRNGEGD--------TRHFLYDARGLLLRETAPDDTL--HYRYDAVG 871 Query: 253 NLLNEENPHQLQQL 266 L + QL Sbjct: 872 RLTEVSSATAHVQL 885 Score = 41.3 bits (95), Expect = 0.070, Method: Composition-based stats. Identities = 48/301 (15%), Positives = 80/301 (26%), Gaps = 45/301 (14%) Query: 8 ARDAHYLYRYDRHGRLTE---------------KTDLIPEGVIRTDDERTHRYHYDSQHR 52 A RYD R+ + + +PE +IR DD+ R YD + Sbjct: 688 AESRTRQLRYDGQDRVVQWQRADGARFRLGYRRASWTLPEQLIRPDDKEEQR-QYDRHNN 746 Query: 53 LVHYTRTQYA------EPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYG 106 L+ Y A P D GR + + LT ++ W Sbjct: 747 LLSYVDGNGALWRQTFGPFDLLTARTDAEGRTWHYAYDKESQQLTTVIAPDGSRWQWWLD 806 Query: 107 WDGDRLTTIQNDRTRIQTIYQPGS--------------FTPLIR----VETATGELAKTQ 148 DG + T Y F R ETA + + Sbjct: 807 ADGRVIRERDMTGTETHYGYDEDGLCISVRNGEGDTRHFLYDARGLLLRETAPDDTLHYR 866 Query: 149 RRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQ 208 ++ + S + + + + +L + + +R T+ Sbjct: 867 YDAVGRLTEVSSATAHVQLDYDLRDRVVREWHNGTLLTRQYDDTART----VTRTLTWDG 922 Query: 209 NQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIR 268 + D T A L+H G + +GA D G + Q Sbjct: 923 DAGDTTGTLAPLTSLFHYTRTGELRQVQLPDGADL-TLTQDAAGRESHRRGGSGFVQQRE 981 Query: 269 L 269 Sbjct: 982 Y 982 >UniRef50_Q2SFR1 Rhs family protein n=9 Tax=cellular organisms RepID=Q2SFR1_HAHCH Length = 138 Score = 170 bits (431), Expect = 9e-41, Method: Composition-based stats. Identities = 51/115 (44%), Positives = 74/115 (64%), Gaps = 1/115 (0%) Query: 214 VYTPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQ 273 + ++++ YH DH G P + + EG W A Y +GNL ++ +Q +R GQ Sbjct: 25 AFIQDKQVYHYHLDHLGTPQEMTNAEGEVVWSARYKAYGNLAL-KDVEDVQNPLRFQGQY 83 Query: 274 YDEESGLYYNRHRYYDPLQGRYITQDPIGLKGGWNFYQYPLNPVQYIDSMGLASK 328 YDEE+GL+YNRHRYYDP R+I QDP GL GG + Y+Y LNP++++D +GL +K Sbjct: 84 YDEETGLHYNRHRYYDPSAARFINQDPAGLLGGESNYEYVLNPIEWVDPLGLMAK 138 >UniRef50_A9GD22 Conserved carbohydrate-binding protein, Rhs family n=2 Tax=Sorangium cellulosum 'So ce 56' RepID=A9GD22_SORC5 Length = 1351 Score = 170 bits (430), Expect = 1e-40, Method: Composition-based stats. Identities = 86/370 (23%), Positives = 133/370 (35%), Gaps = 55/370 (14%) Query: 11 AHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVE--- 67 L+ +D G+L IR + R R+ YD+ L Q A Sbjct: 852 GRRLFEHDAAGQLL---------GIRDERGRGQRFAYDAAGNLHEPDGEQRAYGAGNRLV 902 Query: 68 ----SRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGD-RLTTIQNDRTRI 122 + Y +D GR ++ R + ++T Y W+ L ++ R+ Sbjct: 903 QKGGTTYAWDESGRLMSAR--------------DAEGRLTRYTWNALGLLAAVEKPGGRV 948 Query: 123 QTIYQPGSFTPLIR-VETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLE 181 S+ P R + T E A RR +++ VLV + R+ Sbjct: 949 V----EHSYDPFARRIGKRTFERAPDGRRREVSSVRFVWD--------GGVLVHEIKRVA 996 Query: 182 SEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGA 241 V E + + + ++ Y D G P LV G Sbjct: 997 QATGDPVVEERTYCFEEARYAPWAHRDTRVAGGRREESPWFHYLNDDVGAPERLVGPAGE 1056 Query: 242 TEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEESGLYYNRHRYYDPLQGRYITQDPI 301 + +G + E + +R PGQ DEE+GL YNR+RY+DP GRY++ DP Sbjct: 1057 VVCELDRSAFGAKVKEGG--RTTTPLRFPGQYEDEETGLVYNRYRYFDPALGRYLSADPA 1114 Query: 302 GLKGGWNFYQYPLN-PVQYIDSMGLASKYGHLNNGGYGARPNKPPTPDPSKLPDIAKQLR 360 GL GG+N + Y N P +++D GL N G PD D + Sbjct: 1115 GLDGGFNGFDYAGNAPTRFVDPSGLMPFSTVRNAAGNN--------PDNKDFTDPKNRRG 1166 Query: 361 LPYPIDQASS 370 +P I+ S Sbjct: 1167 VPGDIEGKSQ 1176 Score = 54.0 bits (128), Expect = 1e-05, Method: Composition-based stats. Identities = 45/269 (16%), Positives = 80/269 (29%), Gaps = 34/269 (12%) Query: 6 RIARDAHYLYRYDRHGRLTE------------KTDLIPEGVIRTDDERTHRYHYDSQHRL 53 R Y +DR+G + + L IR + +R YD + RL Sbjct: 551 RHPDGGVTRYAHDRNGDVVRVDHPDGTSTRFDRGGLHKVCAIRRPNGEVNRLGYDREGRL 610 Query: 54 VHYTRTQYAEPLVESRYLYDPLGRRVAKRV-------WRRERDLTGWMSLSRKPQVTWYG 106 V + L+ YD GR V +R +R + + ++T + Sbjct: 611 VRAENARGDVYLM----RYDTAGRMVYERTFAGLEKYYRHDMAGQLLHEKTGAGELTEFT 666 Query: 107 WD-GDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGG 165 +D +L ++ ++ LI T GEL T R+ + + G Sbjct: 667 YDAAGQLVQRTLPDGATES-FEYDHCGQLIAAVTPAGEL--TFTRNAVGWVVEERQIASG 723 Query: 166 SVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTP----ARKI 221 F ++ + + S R +CG + + + V R+I Sbjct: 724 DAFFVRRTYDLMGNVVQRTTSLGHSAAFAR--DACGRATQVVLDGRTAVGVAHDALGREI 781 Query: 222 HLYHCDHRGLPLALVSTEGATEWCAEYDE 250 D G + G Sbjct: 782 ARALPDG-GRIQVVYDALGRMAQRWVGHP 809 Score = 47.1 bits (110), Expect = 0.001, Method: Composition-based stats. Identities = 49/295 (16%), Positives = 77/295 (26%), Gaps = 58/295 (19%) Query: 13 YLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYLY 72 Y +D G L D + RY YD HRL T + + + Y Sbjct: 267 RSYTHDERGDLIADMDA---------EGCVTRYTYDD-HRLTSRTDPED----LTFHFRY 312 Query: 73 DPLGR------------RVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRT 120 D GR R+ + G + YG DG + + Sbjct: 313 DGRGRCVETWGDHPDPERLGLAKGVPDTLADGTKARGIYHCTLVYGDDG----YSEVVDS 368 Query: 121 RIQTIYQPGSFTPLIRVETATGELAKTQRRS---------LADTLQQSGGEDGGSV-VFP 170 Y F L + + + + L T G ++ V Sbjct: 369 ITVHRYFANEFGKLDKAVSGGAVYCRNYDENGNLRSFTDPLGATTTWVRDARGRTLRVSD 428 Query: 171 PVLVQMLDRLESEILADRVSEESRR------------WLASCGLTVEQMQNQ----MDPV 214 P+ + E + RV++ + W G T E + V Sbjct: 429 PLGRTTVIEREPDGHIRRVTDPAGGITEVTRTAGALYWTDPIGATFEVRVEARGLIKETV 488 Query: 215 YTPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRL 269 + H D G + + GA YD WG L+ + Sbjct: 489 APNGARTRFLH-DAHGNVIQKIDGTGAVTEH-VYDYWGRCLSVRDALGHITSYAY 541 Score = 45.2 bits (105), Expect = 0.005, Method: Composition-based stats. Identities = 40/252 (15%), Positives = 69/252 (27%), Gaps = 33/252 (13%) Query: 15 YRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYLYDP 74 + YD G+L ++T D T + YD +L+ P E + + Sbjct: 665 FTYDAAGQLVQRT---------LPDGATESFEYDHCGQLIAAVT-----PAGELTFTRNA 710 Query: 75 LGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQPGSFTPL 134 +G V +R +D + + + Sbjct: 711 VGWVVEERQIASGDAFFVRR-----------TYDLMGNVVQRTTSLGHSAAFARDACGRA 759 Query: 135 IRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSEESR 194 +V +L + ++ + G V L +M R E Sbjct: 760 TQVVLDGRTAVGVAHDALGREIARALPDGGRIQVVYDALGRMAQRWVGHPAKAGAGEGRP 819 Query: 195 RWLA--SCGLTVEQMQN-----QMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWCAE 247 W+ G TV Q ++ + A L+ D G L + G Sbjct: 820 EWVGPRPPGTTVYQAFRYGPCSELVESWDDALGRRLFEHDAAGQLLGIRDERGR-GQRFA 878 Query: 248 YDEWGNLLNEEN 259 YD GNL + Sbjct: 879 YDAAGNLHEPDG 890 >UniRef50_A6EH31 Rhs family protein n=2 Tax=cellular organisms RepID=A6EH31_9SPHI Length = 1409 Score = 170 bits (430), Expect = 1e-40, Method: Composition-based stats. Identities = 73/340 (21%), Positives = 118/340 (34%), Gaps = 67/340 (19%) Query: 2 WPDNRIA-----RDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRY--------HYD 48 W R+ L+++D HG L+E R D + + Y+ Sbjct: 989 WEGERLKGVTDSSTGDKLFKHDVHGNLSEVLYGDGTVEFRVPDAVGNLFESLSRKDRSYN 1048 Query: 49 SQHRLVHYTRTQYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWD 108 RL+ + + Y YD G + KR SR+ +V Y W+ Sbjct: 1049 RGGRLIESSN---------AVYKYDQQGNLIEKR--------------SRRGEVWQYYWN 1085 Query: 109 GDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVV 168 + L RV E +L L + + + Sbjct: 1086 EAGM---------------------LERVVRPDQEEVIFAYDALGRRLWKRFKKTTTRYL 1124 Query: 169 FPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDH 228 + L + + ++E W+ + G + + D K + D Sbjct: 1125 WDGNKP--LHEWKEFDARESTADEIITWVFNEGNFSPVAKIKGD-------KKYSIIADQ 1175 Query: 229 RGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEESGLYYNRHRYY 288 G P+ S +G W E D +G + + + GQ D E+GL YNR RYY Sbjct: 1176 LGTPVQGYSDDGELIWQRELDSYGRMKMQRGDAGFCNYL-YQGQLMDPETGLAYNRFRYY 1234 Query: 289 DPLQGRYITQDPIGLKGGWNFYQYPLNPVQYIDSMGLASK 328 +P +G Y++QDPI L GG Y Y + ++D GLA + Sbjct: 1235 NPEEGIYVSQDPIRLLGGSRLYGYVKDTNIWLDPFGLACE 1274 Score = 62.1 bits (149), Expect = 4e-08, Method: Composition-based stats. Identities = 42/279 (15%), Positives = 81/279 (29%), Gaps = 28/279 (10%) Query: 14 LYRYDRHGRLTEKTDLIP-----------EGVIRTDDERTHRYHYDSQHRLVHYTRTQYA 62 Y Y G + + R +D + YD + R Sbjct: 463 RYTYTAEGNMNGMYNAEGFLNRFAWRERFITARRFNDGTIFTFEYDDKGRCTAAL---GP 519 Query: 63 EPLVESRYLY-DPLG---RRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQND 118 + L + Y D L + D ++ Y +D +++ Sbjct: 520 DGLYSYTFAYIDGLTIATNSLGHSKKYYHADGVVSKIVNSLGGERLYTYDDSNNLIAESN 579 Query: 119 RTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQML- 177 + T Y+ F LI++ + R + ++ +GG ++ V L Sbjct: 580 EIGVATTYEYDDFGNLIKLH-LPAQGEVVIRYNELHQPVETVLPNGGVWIYEYDEVGKLL 638 Query: 178 -------DRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRG 230 D + E AD + +E + Q ++ V P LY+ D G Sbjct: 639 KRVNPLGDAITYEYNADGLIKEITNVVGQSSFFRYDDQYNLNGVLLPNETQVLYYYDALG 698 Query: 231 LPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRL 269 + L + T + +Y+ G + P + Sbjct: 699 RCIELNDPKKNTHYR-KYNLLGKVTEITGPDGGILKLTY 736 Score = 50.6 bits (119), Expect = 1e-04, Method: Composition-based stats. Identities = 49/316 (15%), Positives = 94/316 (29%), Gaps = 51/316 (16%) Query: 11 AHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVE--- 67 LY YD L +++ I Y YD L+ E ++ Sbjct: 562 GERLYTYDDSNNLIAESNEI---------GVATTYEYDDFGNLIKLHLPAQGEVVIRYNE 612 Query: 68 --------------SRYLYDPLGRRVAK-------RVWRRERDLTGWMSLSRKPQVTWYG 106 Y YD +G+ + + + D + Q +++ Sbjct: 613 LHQPVETVLPNGGVWIYEYDEVGKLLKRVNPLGDAITYEYNADGLIKEITNVVGQSSFFR 672 Query: 107 WDGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGS 166 +D Q +Y + I + ++ +L + + G DGG Sbjct: 673 YDDQYNLNGVLLPNETQVLYYYDALGRCIELNDPKKN-THYRKYNLLGKVTEITGPDGGI 731 Query: 167 VVFPPVLVQMLDRLES-----EILADRVSEESRRWLASCGL-TVEQMQNQMDPVYTPARK 220 + + L + E D RR L + V + Q++ + + Sbjct: 732 LKLTYDSMGNLTSAKDRHHKVEFKHDFFGNVVRRSLGDNSVEFVYDKEGQLNGMINEHNE 791 Query: 221 IHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRL--PGQ------ 272 +++ D G + +G + + G + E P+ + + GQ Sbjct: 792 HYVFELDSEGNVIVERGFDG-LVFKYLRNPAGQAVQIERPNGHRDIYEYDSAGQIITLFH 850 Query: 273 QYDE--ESGLYYNRHR 286 Q D+ ES Y N R Sbjct: 851 QADQTVESYAYDNMSR 866 Score = 47.9 bits (112), Expect = 9e-04, Method: Composition-based stats. Identities = 29/192 (15%), Positives = 55/192 (28%), Gaps = 27/192 (14%) Query: 12 HYLYRYDRHGRLTEKTDLIPEGVIRT------------DDERTHRYHYDSQHRLVHYTRT 59 LY YD GR E D R D + YDS L Sbjct: 689 QVLYYYDALGRCIELNDPKKNTHYRKYNLLGKVTEITGPDGGILKLTYDSMGNLTSAKDR 748 Query: 60 QYAEPLVESRYLYDPLGRRVAKR--------VWRRERDLTGWMSLSRKPQVTWYGWDGDR 111 + + + +D G V + V+ +E L G ++ + V +G+ Sbjct: 749 HH-----KVEFKHDFFGNVVRRSLGDNSVEFVYDKEGQLNGMINEHNEHYVFELDSEGNV 803 Query: 112 LTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPP 171 + D + + P +++E G + S + D + Sbjct: 804 IVERGFDGLVFKYLRNPA--GQAVQIERPNGHRDIYEYDSAGQIITLFHQADQTVESYAY 861 Query: 172 VLVQMLDRLESE 183 + + ++ Sbjct: 862 DNMSRMVAAVNQ 873 Score = 47.1 bits (110), Expect = 0.001, Method: Composition-based stats. Identities = 59/313 (18%), Positives = 94/313 (30%), Gaps = 46/313 (14%) Query: 19 RHGRLTEKTDLIPEGVIRTDDERTHRYHY-DSQHRLVHYTRTQYAE-------------- 63 G L D + T +E+ H DS R++ + + Sbjct: 396 GFGNLRSIVDRNGFAIRFTYNEKGHLISIKDSADRMITISSDENGLITALSLPNPDFGAS 455 Query: 64 --PLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTR 121 RY Y G ++ E L + R + DG T +D+ R Sbjct: 456 GMTFDAVRYTYTAEGNMNG--MYNAEGFLNRFAWRERFITARRFN-DGTIFTFEYDDKGR 512 Query: 122 IQTIYQPG-----SFTPLIRVETATGELAKTQRRSLADTL-----QQSGGEDGGSVVFPP 171 P +F + + AT L +++ AD + GGE + Sbjct: 513 CTAALGPDGLYSYTFAYIDGLTIATNSLGHSKKYYHADGVVSKIVNSLGGERLYTYDDSN 572 Query: 172 VLVQMLDRL--ESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYT--PARKIHLYHCD 227 L+ + + + D + L + G V + PV T P + +Y D Sbjct: 573 NLIAESNEIGVATTYEYDDFGNLIKLHLPAQGEVVIRYNELHQPVETVLPNGGVWIYEYD 632 Query: 228 HRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQYD------EESGLY 281 G L V+ G EY+ G + N R Q E+ + Sbjct: 633 EVGKLLKRVNPLGDAI-TYEYNADGLIKEITNVVGQSSFFRYDDQYNLNGVLLPNETQVL 691 Query: 282 YNRHRYYDPLQGR 294 Y YYD GR Sbjct: 692 Y----YYD-ALGR 699 >UniRef50_Q88FK6 RHS family protein, putative n=1 Tax=Pseudomonas putida KT2440 RepID=Q88FK6_PSEPK Length = 1530 Score = 170 bits (430), Expect = 1e-40, Method: Composition-based stats. Identities = 78/327 (23%), Positives = 123/327 (37%), Gaps = 49/327 (14%) Query: 10 DAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRL------VHYTRTQYAE 63 H Y YD L E+ + + + + YD L + Sbjct: 1125 SGHNRYGYD----LNEQLQTVHQSRPNWQATQVEDFKYDKAGNLFDGPKLNGLIKHNRVL 1180 Query: 64 PLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQ 123 + RY YD GR KR+ + + R V Y +R R+ Sbjct: 1181 VYQDKRYRYDRFGRLCEKRIGSNWVQYFEYDAEQRLVCVEQY---------RSGERERVV 1231 Query: 124 TIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESE 183 Y P RR + Q+ E V+F ++L ++S Sbjct: 1232 FAYDP------------------LGRRISKEVYQRDYPEPRRRVLFHWQGFRLLQEVQSG 1273 Query: 184 ILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATE 243 + + V + + P + IH +H G P L ++G T Sbjct: 1274 LASLYVYATVESYD-------PLARVDGKP---GSEAIHYFHTTLVGQPEQLTDSDGNTI 1323 Query: 244 WCAEYDEWGNLLNEENPHQ--LQQLIRLPGQQYDEESGLYYNRHRYYDPLQGRYITQDPI 301 W +++ WG ++NE + Q +Q +R GQ D E+GL++N R+YDP GR+ T DP+ Sbjct: 1324 WRSDHHGWGKIINEWHSQQNGREQNLRNQGQYIDRETGLHFNIFRFYDPDIGRFTTTDPL 1383 Query: 302 GLKGGWNFYQYPLNPVQYIDSMGLASK 328 G++GG N Y Y N V Y D +GL + Sbjct: 1384 GIEGGVNLYSYAPNIVNYSDPLGLCPE 1410 Score = 71.8 bits (174), Expect = 6e-11, Method: Composition-based stats. Identities = 50/287 (17%), Positives = 86/287 (29%), Gaps = 38/287 (13%) Query: 12 HYLYRYDRHGRLTEKTDLIPEG------------VIRTDDERTHRYHYDSQHRLVHYTRT 59 Y+YD GR+T+ TD + + R YHYD+ RL Sbjct: 708 ETQYQYDPEGRVTQVTDALEKSKYLSWNTCGQLLSYRDCSNAQTLYHYDAHGRLRESINA 767 Query: 60 QYAEPLVESRYLYDPLG---------RRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGD 110 + + + YD G R+ + LT ++ ++K Y G Sbjct: 768 RGEH----THFRYDARGYLVESERPDGRIDRYEIDVAGQLTRYIDPAQKTLQFRYDPSG- 822 Query: 111 RLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFP 170 RL + D ++ ++ L+++ E + D L DG ++ Sbjct: 823 RLV-ERTDAMGYSVKFRYDAYGRLLQLTNENDESYRF-GWDELDRLVAQKDLDGSGRLYA 880 Query: 171 PVLVQMLDRL-------ESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHL 223 ++ + RL E L+D + + Sbjct: 881 YNVLDEVIRLTHVPSPDEQPPLSDNAPPTRTTAIRHDFERDAIGRLVSKRTEDGTTDYRY 940 Query: 224 YHCDHRGLPLALVSTEGATEW-CAEYDEWGNLLNEENPHQLQQLIRL 269 D+ +G + YD G LL+E N L Q R Sbjct: 941 DAADNLLSITF-TDNKGEKQQLDYTYDANGQLLSETNSAGLLQ-YRY 985 Score = 62.1 bits (149), Expect = 4e-08, Method: Composition-based stats. Identities = 40/260 (15%), Positives = 73/260 (28%), Gaps = 26/260 (10%) Query: 18 DRHGRLTEKTDLIPEGVIRTD-DERTHRYHYDSQHRLVHYTRTQYAEPLVESRYLYDPLG 76 D G + + + R D RY YD RL+ DPLG Sbjct: 619 DPQGNCWLAEVIAGQLIKRIDPQGGEWRYSYDDIGRLIETR---------------DPLG 663 Query: 77 RRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQPGSFTPLIR 136 R + R + + + Y G+ L Q Y P + + Sbjct: 664 RSEHIKYLRHWALPIQVTDTAGRTRQYGYDSHGNLLWQQDPLGRETQYQYDP--EGRVTQ 721 Query: 137 VETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSEESRRW 196 V A + + L + ++ ++ + + + ++R + Sbjct: 722 VTDALEKSKYLSWNTCGQLLSYRDCSNAQTLYHYDAHGRLRESINARGEHTHFRYDARGY 781 Query: 197 LASCGLTVEQMQN-------QMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWCAEYD 249 L ++ Q+ PA+K + D G + G + YD Sbjct: 782 LVESERPDGRIDRYEIDVAGQLTRYIDPAQKTLQFRYDPSGRLVERTDAMGYSV-KFRYD 840 Query: 250 EWGNLLNEENPHQLQQLIRL 269 +G LL N + Sbjct: 841 AYGRLLQLTNENDESYRFGW 860 Score = 57.5 bits (137), Expect = 1e-06, Method: Composition-based stats. Identities = 54/283 (19%), Positives = 92/283 (32%), Gaps = 44/283 (15%) Query: 3 PDNRIARDA----------------HYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYH 46 PD RI R +RYD GRL E+TD + V ++ Sbjct: 788 PDGRIDRYEIDVAGQLTRYIDPAQKTLQFRYDPSGRLVERTDAMGYSV---------KFR 838 Query: 47 YDSQHRLVHYTRTQYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWY- 105 YD+ RL+ T R+ +D L R VA++ L + L ++T Sbjct: 839 YDAYGRLLQLTNENDES----YRFGWDELDRLVAQKDLDGSGRLYAYNVLDEVIRLTHVP 894 Query: 106 GWDGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRS--LADTLQQSGGED 163 D + TR I + R+ + E T R + L + ++ Sbjct: 895 SPDEQPPLSDNAPPTRTTAIRHDFERDAIGRLVSKRTEDGTTDYRYDAADNLLSITFTDN 954 Query: 164 GGSVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHL 223 G +L SE + + + L + V Q +++ +Y + +H Sbjct: 955 KGEKQQLDYTYDANGQLLSETNSAGLLQYRYDELGNLQTLVLPDQRELNHLYYGSGHLHQ 1014 Query: 224 YHCDHRGLPL----------ALVSTEGATEWCAEYDEWGNLLN 256 + G + ++ T+G YD G L Sbjct: 1015 I--NLNGRVISDFERDAVHDEVLRTQGKLVTRTRYDTSGRLAG 1055 Score = 55.6 bits (132), Expect = 4e-06, Method: Composition-based stats. Identities = 33/180 (18%), Positives = 56/180 (31%), Gaps = 13/180 (7%) Query: 12 HYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYL 71 + + D GRL K RT+D T Y YD+ L+ T T + Y Sbjct: 915 RHDFERDAIGRLVSK---------RTEDGTTD-YRYDAADNLLSITFTDNKGEKQQLDYT 964 Query: 72 YDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQPGSF 131 YD G+ +++ L + T D L + + I G Sbjct: 965 YDANGQLLSET---NSAGLLQYRYDELGNLQTLVLPDQRELNHLYYGSGHLHQINLNGRV 1021 Query: 132 TPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSE 191 + E+ +TQ + + T + G G + + L + S+ Sbjct: 1022 ISDFERDAVHDEVLRTQGKLVTRTRYDTSGRLAGKAIHYRDAPAEVLPLLDKAYRYDASD 1081 >UniRef50_C4NV50 Rhs repeat family protein n=10 Tax=Gammaproteobacteria RepID=C4NV50_ECOLX Length = 1374 Score = 170 bits (430), Expect = 1e-40, Method: Composition-based stats. Identities = 75/303 (24%), Positives = 106/303 (34%), Gaps = 35/303 (11%) Query: 39 DERTHRYHYDSQHRLVHYTRTQYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLS- 97 YD+ R+ Y YD G R + + T + Sbjct: 943 SSVNQSLGYDAVGRITSAE-----GIYGVLGYGYDATGNRTSITTDGLSQSYTINYMNNW 997 Query: 98 -RKPQVTWYGWDGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTL 156 K T +D + T Q T + S L+ T G L + Sbjct: 998 LVKAGQTSRSYDANGNLTKQGADT-----FTYDSQNRLV-AATVAGVTVSYTYNHLDQRV 1051 Query: 157 QQSGGEDGGSVVFPPV--LVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPV 214 ++ +V+ L++ LD ++LA+ + WL L Sbjct: 1052 TKTLNGHTRLLVYDLAGNLIEELDAATGDVLAEYI------WLDGTPLG----------- 1094 Query: 215 YTPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQY 274 + + + + H DH G P AL G W A Y +G +R PGQ Y Sbjct: 1095 FVQSGQTYQVHVDHLGTPKALTDVSGQVVWKASYSPFGKASIIIQGPTF--NLRFPGQYY 1152 Query: 275 DEESGLYYNRHRYYDPLQGRYITQDPIGLKGGWNFYQYPL-NPVQYIDSMGLASKYGHLN 333 D E+G +YN RYYDP GRYIT DP+GL G N Y Y NP+ D G + G Sbjct: 1153 DAETGFHYNWRRYYDPATGRYITSDPLGLIDGVNTYGYVHGNPMSNTDPTGEFAFVGAGI 1212 Query: 334 NGG 336 G Sbjct: 1213 GAG 1215 Score = 63.3 bits (152), Expect = 2e-08, Method: Composition-based stats. Identities = 48/345 (13%), Positives = 84/345 (24%), Gaps = 61/345 (17%) Query: 6 RIARDAHYLYRYDRHGRLTEKTDLIP-------------EGVIRTDDERTHRYHYDSQHR 52 R + YD G L T+ + G I+ + T YD++ R Sbjct: 498 RTDVSDVTTFDYDDQGNLIRTTNALGQVTQFGDYDANGRAGTIQGVNGVTQTLTYDARGR 557 Query: 53 LVHYTRTQYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRL 112 LV T P + Y YD +G + + + R T G+R Sbjct: 558 LVSST-----GPEGTTVYNYDAVGLLSSLTKPNGATVSYEYDAAHRLVAET--DAQGNRR 610 Query: 113 TTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPV 172 ND + L + + + + S V + Sbjct: 611 ELELNDLG---NPVEERLLDALGQTRWIERRIFNEIGWLSSVSDAYSNQSSFSYDVVANL 667 Query: 173 LVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYT---PARKIHLYHCDHR 229 + + + + G + + VY P ++ Y + Sbjct: 668 IQETSPSGNTHSYKYDGFHHRTQTTDPLGKVTQVLYKDTGDVYRVSDPRSRLTYYSYNGF 727 Query: 230 GLPLAL-----------VSTEGATEWC---------AEYDEWGNLLNEENPHQLQQLIRL 269 G + G YD ++ + + I Sbjct: 728 GEVTQVRSPDTGTTDITYDEAGNVATRKTAKGQTTSYSYDALNRIIETSSDVAGESPILY 787 Query: 270 PGQQYDEESGLYYNRHRYYDPLQGRYITQDPIGLKGGWNFYQYPL 314 YDE + Y GR + D G + Y Sbjct: 788 G---YDEATSPY---------GIGRLTSVDD---GNGVRRFGYTP 817 Score = 49.4 bits (116), Expect = 3e-04, Method: Composition-based stats. Identities = 46/292 (15%), Positives = 85/292 (29%), Gaps = 40/292 (13%) Query: 11 AHYLYRYDRHGRLTEKT----------------DLIPEGVIRTDDERTHRYHYDSQHRLV 54 Y+Y+ G+L E + G++ + R + YD+Q R V Sbjct: 268 GSIQYQYNSAGKLAEVIYQDNTSRSYLYDDPNAPGLLSGLVDENGNRFATWGYDTQGRAV 327 Query: 55 HYTRTQYAEPLVESRYLYDPLGRR--------VAKRVWRRERDLTGWMSLSRKPQV---- 102 AE S Y+ G V + + R + + P Sbjct: 328 LSEHAGGAEKTQVS---YNADGSVSVTNALGHVQRYTYSRHNGMLKPDVVEGAPCTGFVG 384 Query: 103 --TWYGWDGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSG 160 Y +D L + DR + + +ET + + + + Sbjct: 385 GKETYVYDSKGLVSSITDRAGQKRTFTHNDRG----LETTQIDQDGGKVTTDWLPSKSLP 440 Query: 161 GEDGGSVVFPPVLVQMLDRLESEILADRVSEESRRW---LASCGLTVEQMQNQMDPVYTP 217 + + R+ S + DR S SR W A G + +D T Sbjct: 441 AKITEPTRITELTYDTHLRVISRKVTDRSSGASRTWTYTYAPVGTGKPSLLASVDGPRTD 500 Query: 218 ARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRL 269 + + D +G + + G +YD G + + + Q + Sbjct: 501 VSDVTTFDYDDQGNLIRTTNALGQVTQFGDYDANGRAGTIQGVNGVTQTLTY 552 Score = 47.5 bits (111), Expect = 0.001, Method: Composition-based stats. Identities = 46/323 (14%), Positives = 80/323 (24%), Gaps = 89/323 (27%) Query: 17 YDRHGRLTEKTDLIPEGVIRTD-----------DERTHRYHYDSQHRLVHYTRTQYAEPL 65 YD GRL T V D + T Y YD+ HRLV T Q Sbjct: 552 YDARGRLVSSTGPEGTTVYNYDAVGLLSSLTKPNGATVSYEYDAAHRLVAETDAQGNRRE 611 Query: 66 VE-------------------------------------------SRYLYDPLGRRVAKR 82 +E S + YD + + + Sbjct: 612 LELNDLGNPVEERLLDALGQTRWIERRIFNEIGWLSSVSDAYSNQSSFSYDVVANLIQET 671 Query: 83 VWRRERDLTGWMSLSRKPQVT----------------------------WYGWDG-DRLT 113 + + Q T +Y ++G +T Sbjct: 672 SPSGNTHSYKYDGFHHRTQTTDPLGKVTQVLYKDTGDVYRVSDPRSRLTYYSYNGFGEVT 731 Query: 114 TIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVL 173 +++ T I + R +TA G+ +L ++ S G S + Sbjct: 732 QVRSPDTGTTDITYDEAGNVATR-KTAKGQTTSYSYDALNRIIETSSDVAGESPILYGYD 790 Query: 174 VQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPL 233 + + RR+ + + + + Y D GL Sbjct: 791 EATSPYGIGRLTSVDDGNGVRRFGYTPEGWLAYETWETHGQSLTTQ----YQYDGAGLVT 846 Query: 234 ALVSTEGATEWCAEYDEWGNLLN 256 + G D G+++ Sbjct: 847 KITYPSGREV-SYTRDSAGDVIE 868 Score = 41.3 bits (95), Expect = 0.076, Method: Composition-based stats. Identities = 41/247 (16%), Positives = 73/247 (29%), Gaps = 46/247 (18%) Query: 4 DNRIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAE 63 +N + + YD +G LT++ + YDSQ+RLV T Sbjct: 995 NNWLVKAGQTSRSYDANGNLTKQG--------------ADTFTYDSQNRLVAATV----- 1035 Query: 64 PLVESRYLYDPLGRRVAKR--------VWRRERDLTGWMSLSRKPQVTWYGW-DGDRLTT 114 V Y Y+ L +RV K V+ +L + + + Y W DG L Sbjct: 1036 AGVTVSYTYNHLDQRVTKTLNGHTRLLVYDLAGNLIEELDAATGDVLAEYIWLDGTPLGF 1095 Query: 115 IQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLV 174 +Q+ +T ++ TP + + + K S ++ P Sbjct: 1096 VQSGQT--YQVHVDHLGTPKALTDVSGQVVWKASY---------SPFGKASIIIQGPTFN 1144 Query: 175 QMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLA 234 + R + + G + + H G P++ Sbjct: 1145 LRFPGQYYDAETGFHYNWRRYYDPATGRYITSDPLG---LIDGVNTYGYVH----GNPMS 1197 Query: 235 LVSTEGA 241 G Sbjct: 1198 NTDPTGE 1204 >UniRef50_B4VFT3 Rhs protein n=4 Tax=Bacteria RepID=B4VFT3_9ACTO Length = 1253 Score = 170 bits (430), Expect = 1e-40, Method: Composition-based stats. Identities = 80/351 (22%), Positives = 113/351 (32%), Gaps = 67/351 (19%) Query: 4 DNRIARDAHYLYRYDRH---------GRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLV 54 D R + Y YR D + G T D + RY YD Sbjct: 816 DGRALQRRGYSYRADGYLTGIDDSTTGLRTFTLDAASRVTAVETASWSERYAYDEAGNQT 875 Query: 55 HYTRTQYA----------------EPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSR 98 + RY +D LGR ++ R LSR Sbjct: 876 SASWPGDHPGAEAQGDRTYTGTRITRAGSVRYEHDALGRVTLRQKTR----------LSR 925 Query: 99 KPQVTWYGWDG-DRLTTIQN-DRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTL 156 KP Y W+ DRL + D TR + Y P RR+ L Sbjct: 926 KPDTWRYEWNAEDRLVGVTTPDGTRWRYRYDP------------------LGRRTAKQRL 967 Query: 157 QQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYT 216 +SG SV+ + + + + + W + Q + Sbjct: 968 SESG-----SVLEETLFAWDG----TTLCEESAGRVTVTWTHQGLHPLTQTERIGQG--D 1016 Query: 217 PARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQYDE 276 + D G P L++ +G T W WG + +R PGQ YD Sbjct: 1017 VDDRFFAIVTDLVGTPTHLLAEDGTTAWHTRATLWGTTTWNSDATAYT-PLRFPGQYYDP 1075 Query: 277 ESGLYYNRHRYYDPLQGRYITQDPIGLKGGWNFYQYPLNPVQYIDSMGLAS 327 ESGL++N R YDP Y++ DP+GL N Y NP + D +GL Sbjct: 1076 ESGLHHNYFRTYDPETAHYLSPDPLGLAPAPNPTTYVHNPHTWSDPLGLTP 1126 Score = 96.8 bits (239), Expect = 2e-18, Method: Composition-based stats. Identities = 50/233 (21%), Positives = 71/233 (30%), Gaps = 29/233 (12%) Query: 2 WPDNRIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQY 61 + RI R Y +D GR+T + R D T RY ++++ RLV T Sbjct: 894 YTGTRITRAGSVRYEHDALGRVTLRQKTRLS---RKPD--TWRYEWNAEDRLVGVTTPDG 948 Query: 62 AEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTR 121 RY YDPLGRR AK+ + + T + WDG L R Sbjct: 949 ----TRWRYRYDPLGRRTAKQRLSESGSVL---------EETLFAWDGTTLCEESAGRVT 995 Query: 122 IQTIYQPGSFTPLIRVET----ATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQML 177 + +Q PL + E + L T EDG + + Sbjct: 996 VTWTHQ--GLHPLTQTERIGQGDVDDRFFAIVTDLVGTPTHLLAEDGTTAWHTRATLWGT 1053 Query: 178 DRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRG 230 S+ A ++ DP H D G Sbjct: 1054 TTWNSDATAYTPLRFPGQYYDPESGLHHNYFRTYDPETA-----HYLSPDPLG 1101 Score = 62.9 bits (151), Expect = 3e-08, Method: Composition-based stats. Identities = 54/318 (16%), Positives = 85/318 (26%), Gaps = 70/318 (22%) Query: 9 RDAHYLYRYDRHGRLTEKTDLIPEGVIRTDD-----------ERTHRYHYDSQHR----- 52 D Y YD G LT +T+ E + T Y YD+ Sbjct: 650 DDRTLTYGYDASGILTSRTNAAGEATTYEHNALGQVIRKDAAGLTTSYAYDTFDALASAA 709 Query: 53 ----LVHYTRTQYAEPLVES------RYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQV 102 + + R L E+ Y YD LGRR + L + + R+ + Sbjct: 710 SAESTITWLRDDAGRLLSETVDGRTLTYGYDALGRRTGRTTPGGSESLWTYDAAGRRTAL 769 Query: 103 T------WYGWD--GDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELA--KTQRRSL 152 T +G D G LT N + Y V G + Sbjct: 770 TTADRTLTFGRDAAGQELTRTLNPALSLTHEYDDMGRRTAQSVTGQDGRALQRRGYSYRA 829 Query: 153 ADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVS------EESRRWLAS-CGLTVE 205 L G F + +E+ ++R + + S W G + Sbjct: 830 DGYLTGIDDSTTGLRTFTLDAASRVTAVETASWSERYAYDEAGNQTSASWPGDHPGAEAQ 889 Query: 206 QMQNQMDPVYTPARKIHLYHCDHRGLP-------------------------LALVSTEG 240 + T A + H D G + + + +G Sbjct: 890 GDRTYTGTRITRAGSVRYEH-DALGRVTLRQKTRLSRKPDTWRYEWNAEDRLVGVTTPDG 948 Query: 241 ATEWCAEYDEWGNLLNEE 258 T W YD G ++ Sbjct: 949 -TRWRYRYDPLGRRTAKQ 965 Score = 53.3 bits (126), Expect = 2e-05, Method: Composition-based stats. Identities = 50/281 (17%), Positives = 87/281 (30%), Gaps = 43/281 (15%) Query: 13 YLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYLY 72 + YD GR+T TD ++R Y YD +HR + + T + R+ Y Sbjct: 319 LRFGYDALGRITSWTDT---------NDRHFDYVYDERHRCIAQSGTNGH---LNVRFAY 366 Query: 73 DPLGR------RVAKRVWRRERDLTGWMSLSRKPQVTWYGWDG-DRLTTIQNDRTRIQTI 125 +P GR R + + T + D +R + + R T+ Sbjct: 367 EP-GRTTRIDTRGHHTRFLVNDLAQITAEIGPTGATTRFTHDAYNRPLSYTDPLGRTTTL 425 Query: 126 YQPGSFTPLIRVETATGELAKTQRRSLA-----------DTLQQSGGEDGGSVVFPPVLV 174 + L+ V G ++ + +L T Q + + V P Sbjct: 426 TYDEA-GRLVCVTRPDGRTSRAEYNALGRPVTLIAPDGRGTRQTYDDQGKRTSVTDPTGA 484 Query: 175 QMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLA 234 ++ V++ + + DP+ D G P+A Sbjct: 485 TTHFAYDARGHLASVTDALGNTTTVRCDRAGLITSTTDPLGATTTCTR----DGFGRPVA 540 Query: 235 LVSTEGATE---WCAEYDEWGNLLNEENPHQLQQLIRLPGQ 272 + G T W E G LL NP ++ G+ Sbjct: 541 VTDPLGHTAHLTWSVE----GRLLRRVNPDGTEESWTYDGE 577 Score = 52.1 bits (123), Expect = 5e-05, Method: Composition-based stats. Identities = 51/277 (18%), Positives = 80/277 (28%), Gaps = 36/277 (12%) Query: 11 AHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRY 70 A + +D + R TD + RT YD RLV TR SR Sbjct: 400 ATTRFTHDAYNRPLSYTDPL---------GRTTTLTYDEAGRLVCVTRPDG----RTSRA 446 Query: 71 LYDPLGR---------RVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGD-RLTTIQNDRT 120 Y+ LGR R ++ + + T + T + +D L ++ + Sbjct: 447 EYNALGRPVTLIAPDGRGTRQTYDDQGKRTSVTDPTGA--TTHFAYDARGHLASVTDALG 504 Query: 121 RIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQML--- 177 T+ + LI T T R G + + L Sbjct: 505 NTTTVRCDRA--GLITSTTDPLGATTTCTRDGFGRPVAVTDPLGHTAHLTWSVEGRLLRR 562 Query: 178 ---DRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYT--PARKIHLYHCDHRGLP 232 D E D A G+TV + + + P H + D Sbjct: 563 VNPDGTEESWTYDGEGNCLTHTDAMGGVTVSEYGDFDLLLARTGPDGTRHTFTHDMELRL 622 Query: 233 LALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRL 269 + + +G W YDE G L +E + Sbjct: 623 TEVSNPQG-LTWSYVYDEAGRLASETDFDDRTLTYGY 658 Score = 50.6 bits (119), Expect = 1e-04, Method: Composition-based stats. Identities = 44/270 (16%), Positives = 78/270 (28%), Gaps = 29/270 (10%) Query: 5 NRIARDA-HYLYRYDRHGRLTEKTDLIPEGVIRT------------DDERTHRYHYDSQH 51 R+ D + YD G TD + + D H + +D + Sbjct: 561 RRVNPDGTEESWTYDGEGNCLTHTDAMGGVTVSEYGDFDLLLARTGPDGTRHTFTHDMEL 620 Query: 52 RLVHYTRTQYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWY-----G 106 RL + Q + Y+YD GR ++ + G+ + T Sbjct: 621 RLTEVSNPQG----LTWSYVYDEAGRLASETDFDDRTLTYGYDASGILTSRTNAAGEATT 676 Query: 107 WDGDRLTTIQN-DRTRIQTIYQPGSFTPLIRVETATGELA---KTQRRSLADTLQQSGGE 162 ++ + L + D + T Y +F L +A + R L++T+ Sbjct: 677 YEHNALGQVIRKDAAGLTTSYAYDTFDALASAASAESTITWLRDDAGRLLSETVDGRTLT 736 Query: 163 DGGSVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIH 222 G + ES D + A LT + + T + Sbjct: 737 YGYDALGRRTGRTTPGGSESLWTYDAAGRRTALTTADRTLTFGRDAAGQELTRTLNPALS 796 Query: 223 LYH-CDHRG--LPLALVSTEGATEWCAEYD 249 L H D G ++ +G Y Sbjct: 797 LTHEYDDMGRRTAQSVTGQDGRALQRRGYS 826 >UniRef50_B2PVY9 Putative uncharacterized protein n=12 Tax=Enterobacteriaceae RepID=B2PVY9_PROST Length = 707 Score = 169 bits (429), Expect = 1e-40, Method: Composition-based stats. Identities = 73/356 (20%), Positives = 127/356 (35%), Gaps = 48/356 (13%) Query: 8 ARDAHYLYR-YDRHGRLTE--KTDLIPEGVIRTDDERTHRYH------------------ 46 + A YR YD+ GR + P + R Y Sbjct: 242 TQGALTQYRQYDKLGRTISTFSSRNKPHPLNGIASSRKWFYDEQDNLGAMEDHYRGWVEY 301 Query: 47 -YDSQHRLVHYTRTQYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQV--- 102 YDS+ RL + + + ++ YD + + E +LS + Sbjct: 302 LYDSEQRLKKVSSGENMDAML----FYDRADNLLERPQSEIEAQTPSMPALSPQGDRLLQ 357 Query: 103 -----TWYGWDGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQ 157 + G+ ++ + ++ + Y + + + + + Sbjct: 358 FQGWQYRHDAYGNVISRVHPNQAKQTYQYDGDNRLVIAQTSDMKAQYHYDALGRRIHKVV 417 Query: 158 QSGGEDGGSVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTP 217 +S G V RL E + ++ + T + + Y Sbjct: 418 ESRAY-GTLKRHETHFVWQGLRLLQEQDINTSKHQTYCYEEHGSYTPLAVIVKQPSGYH- 475 Query: 218 ARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLN---------EENPHQLQQLIR 268 + +HCD PL + + +G T W +Y+ +G + + E +Q +R Sbjct: 476 ---YYWHHCDINSAPLDVTNEQGNTVWSGKYERFGFVRSSPLSFYSDPERKMESFEQNLR 532 Query: 269 LPGQQYDEESGLYYNRHRYYDPLQGRYITQDPIGLKGGWNFYQYPLNPVQYIDSMG 324 GQ +D E+GL++N R+YDP GR+I DPIGL GG N YQY NP+ +ID G Sbjct: 533 YAGQYFDNETGLHFNTFRFYDPQIGRFIMPDPIGLLGGINLYQYAPNPLGWIDPWG 588 Score = 90.2 bits (222), Expect = 2e-16, Method: Composition-based stats. Identities = 42/236 (17%), Positives = 76/236 (32%), Gaps = 30/236 (12%) Query: 4 DNRIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAE 63 +R+ + + YR+D +G + + ++ Y YD +RLV + Sbjct: 352 GDRLLQFQGWQYRHDAYGNVISRVH---------PNQAKQTYQYDGDNRLVIAQTSD--- 399 Query: 64 PLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQ 123 ++++Y YD LGRR+ K V R K T + W G RL Q+ T Sbjct: 400 --MKAQYHYDALGRRIHKVVESRAYGTL-------KRHETHFVWQGLRLLQEQDINTSKH 450 Query: 124 TIY---QPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRL 180 Y + GS+TPL + ++ + G+ V+ + Sbjct: 451 QTYCYEEHGSYTPLAVIVKQPSGYHYYWHHCDINSAPLDVTNEQGNTVWSGKYERFGFVR 510 Query: 181 ESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIH------LYHCDHRG 230 S + E Q + ++ + + D G Sbjct: 511 SSPLSFYSDPERKMESFEQNLRYAGQYFDNETGLHFNTFRFYDPQIGRFIMPDPIG 566 Score = 64.4 bits (155), Expect = 1e-08, Method: Composition-based stats. Identities = 43/288 (14%), Positives = 94/288 (32%), Gaps = 45/288 (15%) Query: 16 RYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRT------QYAEPLVESR 69 +YD G L ++ L +++Y +DS +RL+ +R + + Sbjct: 114 QYDPAGNLVQRETLTD----------SYQYQWDSLNRLLVASRQPNQLGLEMGLQANQVH 163 Query: 70 YLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQPG 129 + YD LG R+ + + + L+ +T GD L + I Sbjct: 164 FTYDALG-RITREQTGDDIVEFAYDELNNLSCLT--LPQGDSLNWLYYGSGHATAINHLV 220 Query: 130 SFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVV-----------FPPVLVQMLD 178 TP + E +L + R+ Q + G + + Sbjct: 221 DGTPHLITEFERDDLHREISRTQGALTQYRQYDKLGRTISTFSSRNKPHPLNGIASSRKW 280 Query: 179 RLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLA---- 234 + + + + R W+ + ++++ A + + P + Sbjct: 281 FYDEQDNLGAMEDHYRGWVEYLYDSEQRLKKVSSGENMDAMLFYDRADNLLERPQSEIEA 340 Query: 235 ------LVSTEGATE-----WCAEYDEWGNLLNEENPHQLQQLIRLPG 271 +S +G W +D +GN+++ +P+Q +Q + G Sbjct: 341 QTPSMPALSPQGDRLLQFQGWQYRHDAYGNVISRVHPNQAKQTYQYDG 388 Score = 45.6 bits (106), Expect = 0.005, Method: Composition-based stats. Identities = 45/277 (16%), Positives = 80/277 (28%), Gaps = 47/277 (16%) Query: 13 YLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYLY 72 ++Y+ GR+T + D + R YHY+++ L+ L+ Sbjct: 20 RQWQYNAFGRVTTEIDKLA---------RHIHYHYNAEGVLISIENANGGRYLLNR---- 66 Query: 73 DPLGRRVAKRVWRRERDLTGWMSLSRKPQVTW----------------YGWDGDRLTTIQ 116 D GR + + + S R + T Y G+ +Q Sbjct: 67 DAEGRLIEEIRPDDTLLQYRYNSFGRLAEETRLGDRVFPSPARTVLLQYDPAGN---LVQ 123 Query: 117 NDRTRIQTIYQPGSFTPLIRVETATGELA------KTQRRSLADTLQQSGGEDGGSVVFP 170 + YQ S L+ +L Q D L + E G + Sbjct: 124 RETLTDSYQYQWDSLNRLLVASRQPNQLGLEMGLQANQVHFTYDALGRITREQTGDDIVE 183 Query: 171 PVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRG 230 D L + +S WL + + +D TP D Sbjct: 184 FAY----DELNNLSCLTLPQGDSLNWLYYGSGHATAINHLVDG--TPHLITEFERDDLH- 236 Query: 231 LPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLI 267 + T+GA +YD+ G ++ + + Sbjct: 237 --REISRTQGALTQYRQYDKLGRTISTFSSRNKPHPL 271 >UniRef50_C8QVK4 YD repeat protein n=4 Tax=Desulfurivibrio alkaliphilus AHT2 RepID=C8QVK4_9DELT Length = 2439 Score = 169 bits (429), Expect = 1e-40, Method: Composition-based stats. Identities = 74/331 (22%), Positives = 116/331 (35%), Gaps = 35/331 (10%) Query: 18 DRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYLYDPLGR 77 D+ GR+TEKT+ I Y YD RL+ T+ Y YD G Sbjct: 2015 DQRGRITEKTETIAGTTTTFG------YLYDEAGRLIRVTQD-----GAIVEYTYDQNGN 2063 Query: 78 RVAKRVWRRERDLT---GWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQPGSFTPL 134 R+ + + Y +G+ L Q + ++ L Sbjct: 2064 RLQHSAGGTTITGSYEAQDRMTAYGNATYQYTANGELLRKTQGTQVTSY------TYDVL 2117 Query: 135 IRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSEESR 194 ++ + + + ++ G + G +V D+L D + Sbjct: 2118 GNLKAVNLPDGRNIEYIIDGSNRRIGKKIDGVLV---QGFLYQDQLNPVAELDANGQVIS 2174 Query: 195 RWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVS-TEGATEWCAEYDEWGN 253 R++ + V + DH G P +V+ + G +YDE+GN Sbjct: 2175 RFIYASRANVPDYL-------IKNGTTYRIITDHLGSPRLVVNTSTGEIAQRIDYDEFGN 2227 Query: 254 LLNEENPHQLQQLIRLPGQQYDEESGLYYNRHRYYDPLQGRYITQDPIGLKGG-WNFYQY 312 +L + NP Q G +D ++ L R YDP GR+ +DPI GG N Y Y Sbjct: 2228 VLQDTNPGF--QPFGFAGGLHDRDTNLTRFGARDYDPQTGRWTAKDPILFAGGDTNLYGY 2285 Query: 313 PLN-PVQYIDSMGLASKYGHLNNGGYGARPN 342 LN P+ +ID G G G GA Sbjct: 2286 VLNDPINWIDPEGKIGIAGAAVGGVIGAVSG 2316 Score = 51.0 bits (120), Expect = 1e-04, Method: Composition-based stats. Identities = 37/220 (16%), Positives = 59/220 (26%), Gaps = 37/220 (16%) Query: 3 PDNRIARDA-----HYLYRYDRHGRLTEKTDLIPE---------------GVIRTDDERT 42 + RI++ Y YD GRL+ I Sbjct: 1715 ANGRISQSRPAGLLEVGYHYDLRGRLSSIAQGDGAQGRYLDFTYDSQGYPAAISDGLGVL 1774 Query: 43 HRYHYDSQHRLVHYTRTQYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQ- 101 Y YD R+ E RY YD G A R L + + R+ + Sbjct: 1775 AAYEYDLAGRVTRQELADG----REIRYGYDANGNLTAITPPGRSPHLFTYTATDRQQEY 1830 Query: 102 ----------VTWYGWDGD-RLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRR 150 T Y ++ D LT I + + G L ++ G Sbjct: 1831 LPPAAGAQPAATRYAYNLDGELTQITRPDGQTLELGYSGCCGKLAYLDLPHG-RIDYSYH 1889 Query: 151 SLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVS 190 S L + ++ F L + + + V+ Sbjct: 1890 SATGRLSGITTPENNTLAFTYDGFLPLTQSWTGEINGSVA 1929 >UniRef50_C8W2A7 YD repeat protein n=3 Tax=Desulfotomaculum acetoxidans DSM 771 RepID=C8W2A7_DESAS Length = 1732 Score = 169 bits (429), Expect = 2e-40, Method: Composition-based stats. Identities = 71/319 (22%), Positives = 114/319 (35%), Gaps = 41/319 (12%) Query: 13 YLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYLY 72 Y Y Y +G ++ + + YD+ RL ++ T V+ Y+Y Sbjct: 1314 YDYSYYNNGNISSISSWAGIDN----------FVYDANGRLTSWSFTPQNGSPVQESYIY 1363 Query: 73 DPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQPGSFT 132 D G + K + S + Q+T G+ D + +D T Y + + Sbjct: 1364 DAAGNMLRK--------GSRDFSYNNANQITNSGFTYDNNGNMTSDGT---FNYTYDTES 1412 Query: 133 PLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSEE 192 L +V+ + D L+ V+ Q + D Sbjct: 1413 QLTQVKRVSDNSLVATYNYRHDGLR------TSKTVYSGQTSQT-----TYFNWDAFGRL 1461 Query: 193 SRRWLASCGLTVEQMQNQMDPV-YTPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEW 251 R ++ ++ NQ V + + H + RG L + +G YD W Sbjct: 1462 VRESDSAGNVSFYNYDNQGKLVCFRKNNYTYEVHLNLRGDVYLLTNIDGGFYAKYNYDPW 1521 Query: 252 GNLLNEENPHQLQQLIRLPGQQYDEESGLYYNRHRYYDPLQGRYITQDPIGL-----KGG 306 GN ++ + R G YDEE+GLYY + RYY P GR++T+D I Sbjct: 1522 GNQISYSG--WISAPFRYAGYYYDEETGLYYLKSRYYSPALGRFLTKDSIKYIKYKNPQT 1579 Query: 307 WNFYQYPL-NPVQYIDSMG 324 N Y Y NPV +D G Sbjct: 1580 LNLYSYAGSNPVNNVDPTG 1598 Score = 52.9 bits (125), Expect = 3e-05, Method: Composition-based stats. Identities = 39/258 (15%), Positives = 73/258 (28%), Gaps = 39/258 (15%) Query: 5 NRIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEP 64 N + + + YD +G +T + T Y YD++ +L R Sbjct: 1380 NNANQITNSGFTYDNNGNMTS--------------DGTFNYTYDTESQLTQVKRVSDNSL 1425 Query: 65 LVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQT 124 + Y +D G R +K V+ + Q T++ WD ++D + Sbjct: 1426 VATYNYRHD--GLRTSKTVYS-----------GQTSQTTYFNWDAFGRLVRESDSAGNVS 1472 Query: 125 IYQPGSFTPLI--RVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLES 182 Y + L+ R T E+ R + L G + P Q+ Sbjct: 1473 FYNYDNQGKLVCFRKNNYTYEVHLNLRGDV-YLLTNIDGGFYAKYNYDPWGNQISYSGWI 1531 Query: 183 EILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHR--------GL-PL 233 L + T ++ + + + G P+ Sbjct: 1532 SAPFRYAGYYYDEETGLYYLKSRYYSPALGRFLTKDSIKYIKYKNPQTLNLYSYAGSNPV 1591 Query: 234 ALVSTEGATEWCAEYDEW 251 V G A + + Sbjct: 1592 NNVDPTGEIPVRATWKAF 1609 Score = 47.5 bits (111), Expect = 0.001, Method: Composition-based stats. Identities = 15/83 (18%), Positives = 29/83 (34%), Gaps = 11/83 (13%) Query: 2 WPDNRIARDAH----YLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYT 57 W N + Y YD G + +KT + ++ YD ++L+ + Sbjct: 620 WSSNSLITAQDAKGTITYEYDTKGNIIKKTITVDNDA---NNNIIQTMTYDEYNQLLEF- 675 Query: 58 RTQYAEPLVESRYLYDPLGRRVA 80 ++ Y YD G ++ Sbjct: 676 ---VDGSGRKTSYKYDNRGNLLS 695 Score = 45.6 bits (106), Expect = 0.004, Method: Composition-based stats. Identities = 42/243 (17%), Positives = 74/243 (30%), Gaps = 31/243 (12%) Query: 7 IARDAHYLYRYDRHGR-LTEKTDLIPEGVIRTDDERT-------------HRYHYDSQHR 52 + RD Y Y G LT D + + R +E T Y YD+ +R Sbjct: 1020 VHRDGE-KYTYSASGNYLTTSEDALGKQSRRVYNENTGTQLSFTDASNNTTYYDYDNLNR 1078 Query: 53 LVHYTRTQYAEPLVESRYLYDPLGRRVA----KRVWRRERDLTGWMSLSRKPQVTWYGWD 108 LV T + Y YDP+ A K + + + Q+ Sbjct: 1079 LVRVTDPMSGH----AYYEYDPVSNLTATRDPKSSSSTDSTYRTLFAHNNINQLNTLADP 1134 Query: 109 GDRLTTIQNDRTR-IQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSV 167 R + DR+ + + P ++ + + L + + DG + Sbjct: 1135 LLRNISNTYDRSSNLTRVSLPNGL----QINYTYDSANRLTSKILDNGKHYNYSYDGANN 1190 Query: 168 VFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKI---HLY 224 + L A RV + + T ++ N + Y P+ ++Y Sbjct: 1191 LISVTDQDNKSCLWDYDGAGRVKYSTDSFGYRLDYTWDKSNNLVKESYPPSTYACISYIY 1250 Query: 225 HCD 227 D Sbjct: 1251 GSD 1253 Score = 43.3 bits (100), Expect = 0.023, Method: Composition-based stats. Identities = 42/271 (15%), Positives = 81/271 (29%), Gaps = 32/271 (11%) Query: 8 ARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLV- 66 + + YD GRL + +D +R Y Y++ +L T + Sbjct: 457 RDNNTTTFTYDASGRLYQLSD---------PSDRKLTYTYNTSGQLSAMTDPGNRTYQLA 507 Query: 67 ---------------ESRYLYDPLGRRVA-----KRVWRRERDLTGWMSLSRKPQVTWYG 106 + YD G + RV G + R + Sbjct: 508 YQNSRLAAVTDPLNKTVTFAYDANGYLASLTDPLNRVTSFINSSDGKLQTIRDARTNGQD 567 Query: 107 WDGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGS 166 + T + T+ PGS + +TG L K Q + + Sbjct: 568 IYDTLFSQSTQTNTIVTTVIDPGSHRFTFTHDYSTGNLTKYQDQLGNSWQYSWSSNSLIT 627 Query: 167 VVFPPVLVQMLDRLESEILADRVS-EESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYH 225 + + I+ ++ + +T ++ ++ V RK Y Sbjct: 628 AQDAKGTITYEYDTKGNIIKKTITVDNDANNNIIQTMTYDEYNQLLEFVDGSGRKTS-YK 686 Query: 226 CDHRGLPLALVSTEGATEWCAEYDEWGNLLN 256 D+RG L+ + + YD++GN++ Sbjct: 687 YDNRGNLLSTGNPDIKESNGRRYDQYGNVIE 717 >UniRef50_C3JCI6 Rhs family protein n=4 Tax=Bacteria RepID=C3JCI6_9PORP Length = 1387 Score = 169 bits (429), Expect = 2e-40, Method: Composition-based stats. Identities = 79/346 (22%), Positives = 116/346 (33%), Gaps = 61/346 (17%) Query: 11 AHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRY-HYDSQHRLVHYTRTQY-----AEP 64 L+ YD L + R + Y D+ L H + Sbjct: 1006 ETILFDYDPWDNL-------FKADYREGSQVETIYKAPDAIGNLFHTPDRKDRKYGKGGR 1058 Query: 65 LVE---SRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTR 121 L+E Y YD G V K+ R + L Y W G+ + Sbjct: 1059 LLEDKKFSYHYDGEGNLVLKQRLRPDETLAPLWQEGD----WAYEWQGNGM--------- 1105 Query: 122 IQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLE 181 L RV+ GE + + L + ++ V+ + E Sbjct: 1106 ------------LRRVKRPDGETVEFEYDPLGRRISKTYKGKTIRWVWDGNVPLHEWTEE 1153 Query: 182 SEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGA 241 S++ WL G V + D Y+ D+ G P + GA Sbjct: 1154 SDVT---------TWLFEEGTFVPTAKIVGDKSYS-------IITDYLGTPTHAFDSHGA 1197 Query: 242 TEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEESGLYYNRHRYYDPLQGRYITQDPI 301 W D +G + GQ +DEE L YNR RYYDP G YI+QDPI Sbjct: 1198 KVWERNLDIYGKIR---TGDSTLVPFLFQGQYFDEEIDLCYNRFRYYDPSTGTYISQDPI 1254 Query: 302 GLKGGWNFYQYPLNPVQYIDSMGLASKYGHLNNGGY-GARPNKPPT 346 + G N Y Y + +ID GL+ +GH ++ + G P + T Sbjct: 1255 SIAGRLNVYAYVHDSNSWIDPFGLSGTHGHHSDPKFMGGDPKQSLT 1300 Score = 74.8 bits (182), Expect = 6e-12, Method: Composition-based stats. Identities = 28/136 (20%), Positives = 48/136 (35%), Gaps = 21/136 (15%) Query: 4 DNRIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERT-HRYHYDSQHRLVHYTRTQYA 62 R+ D + Y YD G L K L P+ + + Y + L R Sbjct: 1056 GGRLLEDKKFSYHYDGEGNLVLKQRLRPDETLAPLWQEGDWAYEWQGNGMLRRVKRPDGE 1115 Query: 63 EPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRT-R 121 + YDPLGRR++K K + + WDG+ + + Sbjct: 1116 ----TVEFEYDPLGRRISKT---------------YKGKTIRWVWDGNVPLHEWTEESDV 1156 Query: 122 IQTIYQPGSFTPLIRV 137 +++ G+F P ++ Sbjct: 1157 TTWLFEEGTFVPTAKI 1172 Score = 54.8 bits (130), Expect = 7e-06, Method: Composition-based stats. Identities = 43/280 (15%), Positives = 77/280 (27%), Gaps = 52/280 (18%) Query: 11 AHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHY---------------------DS 49 YR+D L + I T D + R Y DS Sbjct: 387 EKRRYRFDA---LRNREGYKMLSTIETSDGFSIRLSYSIGGALRTITDSIGREIKVDTDS 443 Query: 50 QHRLVHYTRTQYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDG 109 + R++ + RY YD G V R + + +DG Sbjct: 444 KGRVLELRTIFDGKEKSLIRYTYDDAGNMVETR--------------DMQGAEKHFRYDG 489 Query: 110 DRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVF 169 L + N + G R G+ + + G ++ Sbjct: 490 HLLVQLTNQTGQNFYWEYEGKGD-DARCVHTWGDGGVLEHHTE--------YLPGHTLTR 540 Query: 170 PPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHR 229 + + L ++ +E+ E++ ++P + + + Sbjct: 541 NSLGFTSQYFYDERNLIYKIIDEAGGVTLQEYNEYEELIVTVNPEGGSRKYTY----NDL 596 Query: 230 GLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRL 269 G + + G + EYDE GNLLN P + Sbjct: 597 GDVTCIENENGEST-RYEYDEQGNLLNVTTPQGATHVWEY 635 Score = 49.4 bits (116), Expect = 3e-04, Method: Composition-based stats. Identities = 39/231 (16%), Positives = 76/231 (32%), Gaps = 28/231 (12%) Query: 6 RIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTD----------DERTHRYHYDSQHRLVH 55 R A + + YD G L D + E R + RT R+ YD++ +L Sbjct: 728 READGNEHRFTYDTSGNLVHAKDRLREVRWRYGSLGTLLSRTQNGRTVRFEYDTELQLTG 787 Query: 56 YTRTQYAEPLVESRYLYDPLGRRVAK-----RVWRRERDLTGWMSLSRKPQVTWYGWDGD 110 E R+ + G V + ERD G +S +P W ++ D Sbjct: 788 IAN----EGGELYRFALNGCGDVVDEWGFDGLHRHYERDGAGRVSKVLRPDERWSTYEYD 843 Query: 111 RLTTI----QNDRTRIQTIYQPG-----SFTPLIRVETATGELAKTQRRSLADTLQQSGG 161 + I +D + Y +F R+ G + + + + +S Sbjct: 844 GVGHIVSEQHSDGSASAYKYNKDGLLVAAFNDATRIALVRGRDGRVLQETQGERTVESHY 903 Query: 162 EDGGSVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMD 212 + G+ + + L+ + ++ W + G ++ Q + Sbjct: 904 DAYGNRIRLCSDLGADVALQYDKEGQLSGMQASDWSVAIGRDKSGLEMQRE 954 Score = 48.3 bits (113), Expect = 7e-04, Method: Composition-based stats. Identities = 44/310 (14%), Positives = 89/310 (28%), Gaps = 61/310 (19%) Query: 9 RDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTH-------------RYHYDSQHRLVH 55 + A +++ YD R+ +++ P G R+ + + + YDS+ R + Sbjct: 627 QGATHVWEYDEQDRVIKRS--YPNGNTRSYEYQGQDLSKITDERGNVFLFDYDSKRRPIQ 684 Query: 56 YTRTQYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSR-------KPQVTWYGWD 108 T +LYD G +R R R L + + +D Sbjct: 685 LTYPNGTYRG----WLYDAFGHLSEERDPRGNRTLYRSDEVGNLLWMREADGNEHRFTYD 740 Query: 109 -GDRLTTIQNDRTRIQTIYQPGSF-TPLIRVETATGELAKTQRRSLADTLQQSGGEDGGS 166 L ++ ++ Y GS T L R + + + GGE Sbjct: 741 TSGNLVHAKDRLREVRWRY--GSLGTLLSRTQNGRTVRFEYDTELQLTGIANEGGELYRF 798 Query: 167 VV---------FPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTP 217 + + + + +V RW V + ++ + Sbjct: 799 ALNGCGDVVDEWGFDGLHRHYERDGAGRVSKVLRPDERWSTYEYDGVGHIVSEQHSDGSA 858 Query: 218 ARKIHLYHCDHR------------------GLPLALVSTEGATEWCAEYDEWGNLLNEEN 259 + + Y+ D G L +G + YD +GN + + Sbjct: 859 SA--YKYNKDGLLVAAFNDATRIALVRGRDGRVLQET--QGERTVESHYDAYGNRIRLCS 914 Query: 260 PHQLQQLIRL 269 ++ Sbjct: 915 DLGADVALQY 924 Score = 45.6 bits (106), Expect = 0.004, Method: Composition-based stats. Identities = 42/250 (16%), Positives = 75/250 (30%), Gaps = 37/250 (14%) Query: 6 RIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPL 65 R R LYR D G L +R D HR+ YD+ LVH + L Sbjct: 707 RDPRGNRTLYRSDEVGNLL---------WMREADGNEHRFTYDTSGNLVHAK-----DRL 752 Query: 66 VESRYLYDPLGRRVAKRVWRRERDLTGWMSL------SRKPQVTWYGWDGDRLTTIQNDR 119 E R+ Y LG +++ R L + ++ + +G + Sbjct: 753 REVRWRYGSLGTLLSRTQNGRTVRFEYDTELQLTGIANEGGELYRFALNGCGDVVDEWGF 812 Query: 120 TRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDR 179 + Y+ + +V E T + DG + + Sbjct: 813 DGLHRHYERDGAGRVSKV-LRPDERWSTYEYDGVGHIVSEQHSDGSASAYKY-------- 863 Query: 180 LESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTE 239 ++ + + + + + ++ T + H D G + L S Sbjct: 864 -------NKDGLLVAAFNDATRIALVRGRDGRVLQETQGERTVESHYDAYGNRIRLCSDL 916 Query: 240 GATEWCAEYD 249 GA +YD Sbjct: 917 GADVA-LQYD 925 >UniRef50_D0KWY8 YD repeat protein n=1 Tax=Halothiobacillus neapolitanus c2 RepID=D0KWY8_HALNC Length = 1338 Score = 169 bits (429), Expect = 2e-40, Method: Composition-based stats. Identities = 87/360 (24%), Positives = 137/360 (38%), Gaps = 34/360 (9%) Query: 4 DNRIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTD--------------DERTHRYHYDS 49 + Y YD H L E ++R+ D R+ RY D Sbjct: 620 GRLVGDVTQSRYHYDMHNELIEAQYGHGSVLVRSGGSSHRKKWVAQAPKDARSWRYLLDG 679 Query: 50 -QHRLVHYTRTQYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWD 108 +RL + ++P Y P +R+A + + SL + W+ Sbjct: 680 NANRLYVQQDSTASQPATTQTIRYQPNSQRLAGAGYDANGQIQAIDSLQIR-------WN 732 Query: 109 GD-RLTTIQNDRTRI-QTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGS 166 + RL ++ N I + Y V++ +G +T +Q+ + G Sbjct: 733 AEGRLQSLWNGAHEIARYRYNATGERVAKIVDSRSGHSKETLYLYDQQRHRQAKLDAAGH 792 Query: 167 VVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQM---QNQMDPVYTPARKIHL 223 ++ + D+L + + + + Q V+T + +I Sbjct: 793 IL--RQYFWLGDKLVAVVDYPEGRKPLGNQEPDTFNKLNQYIGYLWGGSLVHTGSGRISY 850 Query: 224 YHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENP---HQLQQLIRLPGQQYDEESGL 280 +H G P+A + W A Y +G L+ + +R PGQ D+ESGL Sbjct: 851 LLDNHLGAPIAATDAQAQVIWRAHYGPYGQQLDVADSLVKDHFSLSLRNPGQWQDKESGL 910 Query: 281 YYNRHRYYDPLQGRYITQDPIGLKGGWNFYQYP-LNPVQYIDSMGLA-SKYGHLNNGGYG 338 YYN HRYYDP GRY++ DP+GL GG N Y Y NP+ Y D GL + NNG G Sbjct: 911 YYNDHRYYDPATGRYLSPDPLGLAGGLNAYAYVAANPIAYTDPYGLMLFAFDGTNNGAPG 970 Score = 61.4 bits (147), Expect = 7e-08, Method: Composition-based stats. Identities = 46/276 (16%), Positives = 90/276 (32%), Gaps = 30/276 (10%) Query: 14 LYRYDRHGRLTEKTD-------------LIPEGVIR--TDDERTHRYHYDSQHRLVHYTR 58 Y YD GR++ TD PE V+R + + YD+Q+RL+ +R Sbjct: 129 RYTYDAAGRISAVTDPDGITMHIDDNYFGRPEKVLRQVAGGGQGWSFQYDAQNRLIQVSR 188 Query: 59 TQYAEPLVESRYLYDPLGRRV--------AKRVWRRERD--LTGWMSLSRKPQVTWYGWD 108 ++ + R YD GR + K+ L+G + + Q YG+D Sbjct: 189 VDGSQERPQDRMAYDSAGRLLWQATALGTLKQASYDTEGHVLSGSVRTAGHEQSERYGYD 248 Query: 109 GDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVV 168 +D T Q +T ++++ L + R + L Sbjct: 249 DRGRLIFVSDGTGSTYRLQ---YTKNGQLQSVINPLGQITRLAFDVALHPVSVTTAADTR 305 Query: 169 FPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDH 228 + + E + ++ + + T++ ++ + +P Y D Sbjct: 306 LARTVSVSRNHAEQSLTVMPALKDQQAPTVTT-RTLKDDFGRIVAITSPNSGETTYRYDD 364 Query: 229 RGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQ 264 + + G +YD G L+ + Sbjct: 365 DNRLIRKTNALGQAR-HYQYDVAGRLIRQYTTQGTG 399 Score = 51.7 bits (122), Expect = 5e-05, Method: Composition-based stats. Identities = 52/305 (17%), Positives = 87/305 (28%), Gaps = 52/305 (17%) Query: 9 RDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAE----- 63 YRYD RL KT+ + + Y YD RL+ TQ Sbjct: 354 NSGETTYRYDDDNRLIRKTNAL---------GQARHYQYDVAGRLIRQYTTQGTGHAVPE 404 Query: 64 -----------------PLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQ----- 101 P +RY Y+ G+ AK V T + + Sbjct: 405 STTTYRYTGTRLVETIDPAQTTRYGYNQWGQLTAKTVVLHSHQGTEITATTNYAYDRQGR 464 Query: 102 -VTWYGWDGDRLTTIQNDRTRIQTIYQPGSFTPLIR-----VETATGELAKTQRRSLADT 155 T DG L +++ + +I ++ + R ++ G LA + Sbjct: 465 LATKTLPDGSLLRYLRDGQGQIVSMQWRDGLSGPTRTLVSHLKRDLGGLAALTYGNGIQA 524 Query: 156 LQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVY 215 Q + G L + +D WL V+ + Sbjct: 525 KWQ-RSKAGVLARIVYSLPDEPGQTSQTASSDSRRVAWDHWLGWLVSPVKADEPPASSQT 583 Query: 216 TPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQYD 275 A G+P+ + YD+ GN+L ++ +L + YD Sbjct: 584 NSAWPGAY------GIPVE---PNTLWDARYLYDDLGNILAVQHQGRLVGDVTQSRYHYD 634 Query: 276 EESGL 280 + L Sbjct: 635 MHNEL 639 >UniRef50_UPI0001B58169 YD repeat-containing protein n=1 Tax=Streptomyces sp. AA4 RepID=UPI0001B58169 Length = 1724 Score = 167 bits (423), Expect = 7e-40, Method: Composition-based stats. Identities = 80/344 (23%), Positives = 112/344 (32%), Gaps = 66/344 (19%) Query: 10 DAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESR 69 Y D GR+ + +R Y+ L ++ + Sbjct: 1048 SGRTAYTRDPAGRVVTVSSPAGGEELR----------YNPAGELTAWSGSPGLSAD---- 1093 Query: 70 YLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQN-DRTRIQTIYQP 128 YD LGRR+ R +V Y W GD LT ++ D + + Y P Sbjct: 1094 --YDSLGRRIRHREVHPGG-----------VRVWEYAWTGDLLTGLRTPDGAQWRYRYDP 1140 Query: 129 GSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADR 188 L + + GSV V L + D Sbjct: 1141 -----------------------LGRRIAKERLLADGSVAESTRFVWDGFVLIEQEHTDP 1177 Query: 189 VS-EESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWCAE 247 + W G Q + P + D G P L+ G W A Sbjct: 1178 SGVRRTTTWERRPGSDEPVTQLERGP---GGDRFASVVTDAIGTPTELIDEHGGLAWSAR 1234 Query: 248 YDEWGNLLNEENPHQLQQLIRLPGQQYDEESGLYYNRHRYYDPLQGRYITQDPIGLKGGW 307 WG + ++ PGQ D ESGL+YN RYYDP RYI+QDP+GL+GG Sbjct: 1235 RSLWGRV------QPGGIPLQFPGQYADAESGLHYNVFRYYDPAAARYISQDPLGLEGGP 1288 Query: 308 NFYQYPLNPVQYIDSMGLASKYGHLNNGGYGARPNKPPTPDPSK 351 N Y +P D +GL + G G + PP +K Sbjct: 1289 NPSNYVPDPFAATDVLGLKC-----GDKGKGKATDPPPADSTAK 1327 Score = 66.4 bits (160), Expect = 3e-09, Method: Composition-based stats. Identities = 57/288 (19%), Positives = 98/288 (34%), Gaps = 48/288 (16%) Query: 9 RDAHYLYRYDRHGRLTEKTDLIPE------------GVIRTDDERTHRYHYDSQHRLVHY 56 R L+RYDR G E D + + Y YD++ RL Sbjct: 774 RRERALWRYDREGNEIEHVDELGRATRHEYGPFDVVTAVVDPSGARTGYTYDTELRLTSV 833 Query: 57 TRTQYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVT---------WYGW 107 T Y YDPLGR VA+ + + + + +VT Y Sbjct: 834 TDPLG----RTWTYTYDPLGRLVAQTDFDGRTRTYDYDAAGQAIRVTEPDGSVTENEYDL 889 Query: 108 DGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSV 167 G+R+ ++ ++ Y P ++RVE+A + + Sbjct: 890 LGNRI-EVRGPHRTVRYAYDP--VGNVVRVESADSVV------------------EFDRD 928 Query: 168 VFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVY-TPARKIHLYHC 226 ++ V+ + +D +E D ++ RR S +V ++ PV T A Y Sbjct: 929 LYGRVVREAIDGVEVRFSYDEQNQTVRRRTPSGAESVWTFDDEDRPVSLTTAGHTVRYRL 988 Query: 227 DHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQY 274 D G LA T+G + + G + ++ + R + Y Sbjct: 989 DDEGRVLAR-DTDGVSTLQQAFGPRGLVTAQQVSRGTTPVQRRGLEYY 1035 Score = 61.7 bits (148), Expect = 6e-08, Method: Composition-based stats. Identities = 62/308 (20%), Positives = 87/308 (28%), Gaps = 46/308 (14%) Query: 3 PDNRIARDAH-----YLYRYDRHGRLT----EKTDLIPEGVIRTDDERTHR--------- 44 PD R+ Y Y YD GR E+ R + T Sbjct: 572 PDGRVTSWEDRNGVSYRYVYDAEGRCVRTEGEQGFYSGSFEFRPEARITRFTDSLGHVSE 631 Query: 45 YHYDSQHRLVHYTRTQYAEPLVES-RY-----LYDPLGRRVAKRVWRRERDLTGWMSLSR 98 Y Y+ + R V T E RY DPLGR LT Sbjct: 632 YEYNLEGRPVRETDPLGNVTFSEWDRYGNLLRRVDPLGRVTEYTYAEDGTPLTVARPDGS 691 Query: 99 KPQVTWYGWDGDRLT--TIQNDRTRIQTIYQ-------PG--SFTPLIRVETATGELAKT 147 ++ DG L T+ D Q Y PG + E +T Sbjct: 692 LAELEH---DGAELAAITVHGDGRTWQRRYDRPAGPELPGFPGEAEVADAELDQFGRPRT 748 Query: 148 QRRSLADTLQQSGGEDGGSVVFPPVLVQM-LDRLESEILADRVSEESRRWLASCGLTVEQ 206 +Q DG V + L R + E +E R + Sbjct: 749 APEVGGGRVQLGWTVDGKPASRTGVRRERALWRYDREGNEIEHVDELGRATRHEYGPFDV 808 Query: 207 MQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQL 266 + +DP AR + Y + R ++ G T W YD G L+ + + + Sbjct: 809 VTAVVDPSG--ARTGYTYDTELR--LTSVTDPLGRT-WTYTYDPLGRLVAQTDFDGRTRT 863 Query: 267 IRL--PGQ 272 GQ Sbjct: 864 YDYDAAGQ 871 Score = 55.6 bits (132), Expect = 5e-06, Method: Composition-based stats. Identities = 63/339 (18%), Positives = 94/339 (27%), Gaps = 53/339 (15%) Query: 14 LYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQY--------AEPL 65 Y YD GR+T D + ++RY YD++ R V Q Sbjct: 567 RYTYDPDGRVTSWEDR---------NGVSYRYVYDAEGRCVRTEGEQGFYSGSFEFRPEA 617 Query: 66 VESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWD--GDRLTTIQNDRTRIQ 123 +R+ D LG + + VT+ WD G+ L + + Sbjct: 618 RITRFT-DSLGHV---SEYEYNLEGRPVRETDPLGNVTFSEWDRYGNLLRRVDPLGRVTE 673 Query: 124 TIYQPGS--------FTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFP-PVLV 174 Y L +E ELA T Q+ G + P Sbjct: 674 YTYAEDGTPLTVARPDGSLAELEHDGAELAAITVHGDGRTWQRRYDRPAGPELPGFPGEA 733 Query: 175 QMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLA 234 ++ D + R + E G TV+ V D G + Sbjct: 734 EVADAELDQFGRPRTAPEVGGGRVQLGWTVDGKPASRTGVRRERALWRY---DREGNEIE 790 Query: 235 LVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEESGLY-------YNRHRY 287 V G EY + + +P + G YD E L Sbjct: 791 HVDELGRAT-RHEYGPFDVVTAVVDPSGAR-----TGYTYDTELRLTSVTDPLGRTWTYT 844 Query: 288 YDPLQGRYITQDPIGLKGGWNFYQY--PLNPVQYIDSMG 324 YDP GR + Q G Y Y ++ + G Sbjct: 845 YDP-LGRLVAQ--TDFDGRTRTYDYDAAGQAIRVTEPDG 880 Score = 43.6 bits (101), Expect = 0.016, Method: Composition-based stats. Identities = 47/225 (20%), Positives = 69/225 (30%), Gaps = 46/225 (20%) Query: 6 RIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPL 65 R A + YRYD GR K L+ +G + + R+ +D L+ T Sbjct: 1127 RTPDGAQWRYRYDPLGRRIAKERLLADGSV----AESTRFVWDGFV-LIEQEHT------ 1175 Query: 66 VESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTI 125 DP G R RR L R P GDR ++ D Sbjct: 1176 -------DPSGVRRTTTWERRPGSDEPVTQLERGPG-------GDRFASVVTDAIG---- 1217 Query: 126 YQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEIL 185 TP ++ G RRSL +Q GG + P + + Sbjct: 1218 ------TPTELIDEHGGLAWSA-RRSLWGRVQ-----PGGIPLQFPGQYADAESGLHYNV 1265 Query: 186 ADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRG 230 + R+++ L +E N + V P D G Sbjct: 1266 FRYYDPAAARYISQDPLGLEGGPNPSNYVPDP-----FAATDVLG 1305 Score = 41.7 bits (96), Expect = 0.069, Method: Composition-based stats. Identities = 41/226 (18%), Positives = 59/226 (26%), Gaps = 34/226 (15%) Query: 25 EKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYLYDPLGRRVAKRVW 84 T+L G D Y Y+ Q L + RY YDP GR + Sbjct: 527 RITELRMIGAGPAPDVVVRAYRYNYQGHLSEVVNSSG----TAMRYTYDPDGRVTS---- 578 Query: 85 RRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGEL 144 W + Y +G R + ++ ++ F P R+ T L Sbjct: 579 --------WEDRNGVSYRYVYDAEG-RCVRTEGEQGFYSGSFE---FRPEARITRFTDSL 626 Query: 145 AKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTV 204 + D V DR RR +T Sbjct: 627 GHVSEYEYNLEGRPVRETDPLGNVTFSE-------------WDRYGNLLRRVDPLGRVTE 673 Query: 205 EQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEG-ATEWCAEYD 249 P+ L +H G LA ++ G W YD Sbjct: 674 YTYAEDGTPLTVARPDGSLAELEHDGAELAAITVHGDGRTWQRRYD 719 >UniRef50_C4SEH6 Insecticidal toxin complex protein n=5 Tax=Yersinia RepID=C4SEH6_YERMO Length = 939 Score = 167 bits (422), Expect = 9e-40, Method: Composition-based stats. Identities = 78/440 (17%), Positives = 133/440 (30%), Gaps = 64/440 (14%) Query: 6 RIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERT--HRYHYDSQHRLVHYTRTQYAE 63 R Y YD G + + + + Y YD+ ++L+ T + Sbjct: 303 RPTLLQDLRYDYDPVGNILAIHNDAEATRFYRNQKIVPETTYRYDALYQLIEATGRESDS 362 Query: 64 PLVES--------------------RYLYDPLGRRVAKRVWRRERDLT------------ 91 +S RY YD G + + + T Sbjct: 363 NSAQSANLPALSLLTDSNQYVNYTRRYTYDRAGNLLKIQHVGASQYSTHITLSDSSNHGI 422 Query: 92 -GWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRR 150 L+ + + G++ + +Q T + R + Sbjct: 423 QQQDGLTAADIRSQFDAAGNQQQLQPGQPLQWDARHQLQQVTTVKRGAENSASDDYESYL 482 Query: 151 SLADTLQ--------QSGGEDGGSVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGL 202 +D ++ + V + P L +E+ D A Sbjct: 483 YGSDGMRVVKQSIQHTNNTVQTAKVTYLPGLELRTRHQGAELTEDFQVITLG--AAGRAQ 540 Query: 203 TVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQ 262 + Q P ++ + G L + T G EY +G H Sbjct: 541 VRVLLWQQGKPEGIDNNQLRYSFDNQIGSSLLELDTHGDIISQEEYYPFGGTAVFAARHT 600 Query: 263 LQQLI---RLPGQQYDEESGLYYNRHRYYDPLQGRYITQDPIGLKGGWNFYQYP-LNPVQ 318 L+ R G++ D +GLYY RYY P GR+++ DP G G N Y+ NPV Sbjct: 601 LEAKYKTIRYSGKERDA-TGLYYYGFRYYMPWLGRWLSADPAGTVDGLNLYRMVRNNPVG 659 Query: 319 YIDSMGLAS--KYGHLNNG-----GYGARPNKPPTPDPSKL-------PDIAKQLRLPYP 364 +D GL+ KY ++ G G R N ++ + + + Sbjct: 660 LMDEDGLSPGVKYNFISKGYDTLADIGKRQNIKHFTQAKRIVTNSYLDANSIIKSAIEKL 719 Query: 365 IDQASSAPNVFKTFFRALSP 384 D + V ++FF LSP Sbjct: 720 NDNSLETTQVLESFFGVLSP 739 >UniRef50_A1TTQ1 Rhs family protein n=1 Tax=Acidovorax citrulli AAC00-1 RepID=A1TTQ1_ACIAC Length = 357 Score = 165 bits (418), Expect = 3e-39, Method: Composition-based stats. Identities = 65/240 (27%), Positives = 94/240 (39%), Gaps = 38/240 (15%) Query: 146 KTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVE 205 + QR +L T + + + ++ ++ G V Sbjct: 10 RGQRFALPTTQTFDHNYTASYYLHELRTPESYRGDNYSDAGGQRGGKASLFIYEPGSFVP 69 Query: 206 QMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWG------------- 252 Q +R I+ Y CD G PL L +G W A+Y WG Sbjct: 70 LATVQGTQQPGDSR-IYWYQCDQIGAPLELTDAQGHVAWAADYKVWGEAALRKVLKSATG 128 Query: 253 -----------------------NLLNEENPHQLQQLIRLPGQQYDEESGLYYNRHRYYD 289 N L+ L+Q R GQQ+D E+GL+YNR RYYD Sbjct: 129 TDALPGPRHKGHGPVLDEHDAYKNQLSHSVSPFLEQPFRFQGQQFDAETGLHYNRFRYYD 188 Query: 290 PLQGRYITQDPIGLKGGWNFYQYPLNPVQYIDSMGLASK-YGHLNNGGYGARPNKPPTPD 348 P GR+ +QDP+GL GG + + Y NP +ID +GL++K Y L P+KP T + Sbjct: 189 PSIGRFFSQDPVGLHGGIHGFAYAPNPNNWIDPLGLSNKCYNCLPKCTDINAPHKPKTAE 248 >UniRef50_Q07833 Wall-associated protein n=18 Tax=Bacillaceae RepID=WAPA_BACSU Length = 2334 Score = 165 bits (417), Expect = 4e-39, Method: Composition-based stats. Identities = 77/335 (22%), Positives = 113/335 (33%), Gaps = 35/335 (10%) Query: 15 YRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYLYDP 74 Y YD +G T V +Y Y ++LV T Y YD Sbjct: 1896 YEYDANGNRTTINSSASGKV---------QYEYGKLNQLVKETHEDG----TVIEYTYDG 1942 Query: 75 LGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQPGSFTPL 134 G R + T S + Q+T + N + + Y + L Sbjct: 1943 FGNRKTVTTIKDGSSKTVNASFNIMNQLTKVNDESISYDKNGNRTSDGKFTYTWDAEDNL 2002 Query: 135 IRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSEESR 194 V + + G V V D +L + ++ + Sbjct: 2003 TAVTKKGEDKPFATYKY------DEKGNRIQKTVNGKVTNYFYDGDSLNVLYETDADNNV 2056 Query: 195 RWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNL 254 + G + + + YT K + YH + G +A+ + G T +YD WGN Sbjct: 2057 TKSYTYGDSGQLLS------YTENGKKYFYHYNAHGDIIAISDSTGKTVAKYQYDAWGNP 2110 Query: 255 LNEENPHQL-QQLIRLPGQQYDEESGLYYNRHRYYDPLQGRYITQDPIGLKGG----WNF 309 E ++ R G QYDEE+GLYY RYY+P G +++ DP G N Sbjct: 2111 TKTEASDEVKDNRYRYAGYQYDEETGLYYLMARYYEPRNGVFLSLDPDPGSDGDSLDQNG 2170 Query: 310 YQYP-LNPVQYIDSMG----LASKYGHLNNGGYGA 339 Y Y NPV +D G L G GY A Sbjct: 2171 YAYGNNNPVMNVDPDGHWVWLVVNAGFAAYDGYKA 2205 Score = 67.1 bits (162), Expect = 1e-09, Method: Composition-based stats. Identities = 37/263 (14%), Positives = 79/263 (30%), Gaps = 43/263 (16%) Query: 5 NRIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEP 64 N++ + YD++G T Y +D++ L T+ +P Sbjct: 1968 NQLTKVNDESISYDKNGNRTSDGKF--------------TYTWDAEDNLTAVTKKGEDKP 2013 Query: 65 LVESRYLYDPLGRRVAKRVWRRERDLT----------GWMSLSRKPQVTWYGWDGDRLTT 114 Y YD G R+ K V + + + + + YG G L+ Sbjct: 2014 FAT--YKYDEKGNRIQKTVNGKVTNYFYDGDSLNVLYETDADNNVTKSYTYGDSGQLLSY 2071 Query: 115 IQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLV 174 +N + + Y + +I + +TG+ + ++ D Sbjct: 2072 TENGK---KYFYHYNAHGDIIAISDSTGKTVAKYQYDAWGNPTKTEASD-----EVKDNR 2123 Query: 175 QMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLA 234 + + +R + G+ + + + + + Y + P+ Sbjct: 2124 YRYAGYQYDEETGLYYLMARYYEPRNGVFLSLDPDPGSDGDSLDQNGYAYGNN---NPVM 2180 Query: 235 LVSTEGATEW------CAEYDEW 251 V +G W A YD + Sbjct: 2181 NVDPDGHWVWLVVNAGFAAYDGY 2203 Score = 61.0 bits (146), Expect = 1e-07, Method: Composition-based stats. Identities = 45/270 (16%), Positives = 79/270 (29%), Gaps = 40/270 (14%) Query: 12 HYLYRYDRHGRLTEKTDLIPEGVIRTD-----------DERTHRYHYDSQHRLVHYTRTQ 60 + YD +G +T T + V + D Y YDS+ RLV Sbjct: 1048 KLTFTYDENGHVTSITGPKNKKVTYSYENDLLKKVTDTDGTVTSYDYDSEGRLVKQYSAN 1107 Query: 61 YAEPL-VESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDR--LTTIQN 117 E V + Y Y G R+ K + + K + Y +D D+ L Q Sbjct: 1108 STEAKPVFTEYQYS--GHRLEKAI-------------NAKKETYVYSYDADKKTLLMTQP 1152 Query: 118 DRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQML 177 + ++Q Y P+ ++ A G T + + + + + Q Sbjct: 1153 NGRKVQYGYNEAG-NPIQVIDDAEGLKITTNTKYEGNNVVEDVDPNDVGTGKATESYQYD 1211 Query: 178 DRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVS 237 + D E+ + N + + + D Sbjct: 1212 KDGNVTSVKDAYGTETYEY---------NKNNDVTKMKDTEGNVTDIAYDGLDAVSE-TD 1261 Query: 238 TEGATEWCAEYDEWGNLLNEENPHQLQQLI 267 G + A YD++GN + I Sbjct: 1262 QSGKSSSAAVYDKYGNQIQSSKDLSASTNI 1291 Score = 47.9 bits (112), Expect = 8e-04, Method: Composition-based stats. Identities = 37/296 (12%), Positives = 72/296 (24%), Gaps = 55/296 (18%) Query: 7 IARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDD--------------ERTHRYHYDSQHR 52 ++ L+ YD+ G KT + YD+ Sbjct: 1668 LSNGTSILHSYDKEGNEVSKTIRAGADQTYKFEYDVMGKLVKTTDPLGNVLASEYDANSN 1727 Query: 53 LVHYTRTQYAE-----------------PLVESRYLYDPLGRRVA---------KRVWRR 86 L E + + YD G + K+ Sbjct: 1728 LTKTISPNGNEVSLSYDGTDRVKSKSYNGTEKYIFTYDKNGNETSVVNKEQNTTKKRTFD 1787 Query: 87 ERDLTGWMSLSRKPQVTWYGWDGDRLTTIQ--NDRTRIQTIYQPGSFTPLIRVETATGEL 144 ++ ++ Q Y D D+L T + + + +I ++ +T Sbjct: 1788 NKNRLTELTDRGGSQTWTYPSDSDKLKTFSWIHGDQKGTNQFTYNKLDQMIEMKDSTSSY 1847 Query: 145 AKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRL-ESEILADRVSEESRRWLASCGLT 203 + +Q +GG F ++ L + + ES + A+ T Sbjct: 1848 --SFDYDENGNVQTFITGNGGGTSFSYDERNLVSSLHIGDKNGGDILTESYEYDANGNRT 1905 Query: 204 VEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEEN 259 Y + + +G YD +GN Sbjct: 1906 TINSSASGKVQYEYGK---------LNQLVKETHEDGTVI-EYTYDGFGNRKTVTT 1951 Score = 47.5 bits (111), Expect = 0.001, Method: Composition-based stats. Identities = 34/268 (12%), Positives = 74/268 (27%), Gaps = 24/268 (8%) Query: 17 YDRHGRLTEKTDLIPEGVIRTDDERT-------------HRYHYDSQHRLVHYTRTQYAE 63 YD +G K + TD + T Y YD +L + T + Sbjct: 1614 YDSNGNYVTKEEDELGYATSTDYDETGKKTSETDAKGEKTTYTYDQADQLTNMTLSNGTS 1673 Query: 64 PLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQ 123 L + YD G V+K + + V G+ L + + + + Sbjct: 1674 IL----HSYDKEGNEVSKTIRAGADQTYKFEYDVMGKLVKTTDPLGNVLASEYDANSNLT 1729 Query: 124 TIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESE 183 P + + +K+ + + SVV +++ Sbjct: 1730 KTISPNGNEVSLSYDGTDRVKSKSYNGTEKYIFTYDKNGNETSVVNKEQNTTKKRTFDNK 1789 Query: 184 ILADRVSEE--SRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGA 241 +++ S+ W + + + + D + + + + Sbjct: 1790 NRLTELTDRGGSQTWTYPSDSDKLKTFSWIHGDQKGTNQFTYNKLDQM---IEMKDSTSS 1846 Query: 242 TEWCAEYDEWGNLLNEENPHQLQQLIRL 269 + +YDE GN+ + Sbjct: 1847 --YSFDYDENGNVQTFITGNGGGTSFSY 1872 >UniRef50_B1C8M0 Putative uncharacterized protein n=2 Tax=Anaerofustis stercorihominis DSM 17244 RepID=B1C8M0_9FIRM Length = 3037 Score = 164 bits (416), Expect = 4e-39, Method: Composition-based stats. Identities = 73/337 (21%), Positives = 123/337 (36%), Gaps = 32/337 (9%) Query: 11 AHYLYRYDRHGR-LTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQ--YAEPLVE 67 Y + YD++G LTE+ + Y YD RL T + + Sbjct: 2641 EEYKFTYDKNGNILTEEIYNDYLTEAQDKIHVVKNYTYDELGRLTRVDVTDKLVNDSVST 2700 Query: 68 SRYLYDPLGRRVAKRVWRRERDLTGWMS------LSRKPQVTWYGWDGDRLTTIQNDRTR 121 + Y YD +G R++K + D S + + Y +D + T + ++ Sbjct: 2701 TSYTYDKVGNRLSKTRDGAKEDYEYNDLNELLKVKSGENIIKEYSYDANGNTKKEVSGSK 2760 Query: 122 IQTIYQPGSFTPLIRVETATGELAK----TQRRSLADTLQQSGGEDGGSVVFPPVLVQML 177 + Y + + E GE + +++ + V V Sbjct: 2761 ERN-YSYDISNQMTKYEAKDGEKVTLTQNNTYNYVGQRIRKEVIDSSTENVQTRVNNYYY 2819 Query: 178 DRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVS 237 + E + D ++ + T+ NQ+ ++ + D RG +V Sbjct: 2820 NGEEILYVTDINDKKITENVLDTDFTLRFDNNQLS--------VYTLNSDGRGSTSVVVD 2871 Query: 238 TEGATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEESGLYYNRHRYYDPLQGRYIT 297 +YDE+G+ N + I GQ YD+E+G YY RYY P +GR+IT Sbjct: 2872 AANKGVTGYKYDEFGSTETIGNAI-FENEICYTGQVYDKETGDYYYNARYYSPDEGRFIT 2930 Query: 298 QDPIGLKGG------WNFYQYP-LNPVQYIDSMGLAS 327 D +GG N Y Y NP+++ID G S Sbjct: 2931 VD--TYRGGSNDPLSLNLYTYCLNNPIRFIDPSGHKS 2965 Score = 55.6 bits (132), Expect = 4e-06, Method: Composition-based stats. Identities = 39/272 (14%), Positives = 71/272 (26%), Gaps = 39/272 (14%) Query: 11 AHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRY 70 Y YD +G + + + + YD L+ + + Y Sbjct: 2037 EQNKYSYDENGNILMEEETVSGDKTIN--------TYDEDGELLSEENITAGNKISSTSY 2088 Query: 71 LYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQPGS 130 YD G +++ + + T +D T + D T+Y+ Sbjct: 2089 EYDNKGNTISETTKNAS---------GSEERTTNSEYDKFGRLTKETDAKGYSTMYEYDG 2139 Query: 131 FTPLIRVET------------ATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLD 178 + +I+ + + R + +L EDG + + + Sbjct: 2140 YDRVIKTTKNSLTDKEIADGGSNKAIVTENRYNKNGSLVYEKKEDGSEITYEYDNMNRAV 2199 Query: 179 RLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVST 238 R E+ + A T M N+ + Y K D Sbjct: 2200 RTETAKNGQTSVMTTSYGYAPGNETNFIMGNEENKNYDFLYKETS-TTDGIESVSY-TDA 2257 Query: 239 EGATEWCA--------EYDEWGNLLNEENPHQ 262 G EYD G L+ N Sbjct: 2258 GGQNVKEYSRGNTTYNEYDNQGQLIKTFNIED 2289 Score = 48.6 bits (114), Expect = 5e-04, Method: Composition-based stats. Identities = 37/261 (14%), Positives = 73/261 (27%), Gaps = 39/261 (14%) Query: 15 YRYDRHGRLTEKTDLIPEGVIRTDDERTHRY----HYDSQHRLVHYTRTQYAEPLVESRY 70 Y YD + R+ + T D Y+ LV+ + + E Y Sbjct: 2135 YEYDGYDRVIKTTKNSLTDKEIADGGSNKAIVTENRYNKNGSLVYEKKEDGS----EITY 2190 Query: 71 LYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQPGS 130 YD + R V + + S P G+ I + + + Sbjct: 2191 EYDNMNRAVRTETAKNGQTSVMTTSYGYAP--------GNETNFIMGNE-------ENKN 2235 Query: 131 FTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILAD-RV 189 + L + + T + + + Q++ E AD + Sbjct: 2236 YDFLYKETSTTDGIESVSYTDAGGQNVKEYSRGNTTYNEYDNQGQLIKTFNIEDNADVKY 2295 Query: 190 SEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWCAEYD 249 + G ++N PVY K++ + + +YD Sbjct: 2296 GKLIMNLYNEDGQQTCTIEN---PVYDAENKVYS------------ADDQKSLVTTTKYD 2340 Query: 250 EWGNLLNEENPHQLQQLIRLP 270 + GN ++E +P + Sbjct: 2341 KLGNKISETDPMGNETKYGYT 2361 Score = 44.4 bits (103), Expect = 0.010, Method: Composition-based stats. Identities = 41/300 (13%), Positives = 87/300 (29%), Gaps = 48/300 (16%) Query: 7 IARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRY---HYDSQHRLVHYTRTQYAE 63 + + +Y YD G + + ++ ++ + RY YD ++RLV + Sbjct: 2471 VKKKEDIVYTYDLSGNVVK---VVQSKYNEEGEDLSVRYKVNAYDGRNRLVSSYEGEKET 2527 Query: 64 PL--VESRYLYDPLGRRV-------------------AKRVWRRERDLTGWMSLSRKPQV 102 P RY Y+ + K + LT + + Sbjct: 2528 PSENERLRYSYNDKNELIKVTYPNFETGTKEVIYEYNDKGKVMNIKALTSSSQGEKLVRQ 2587 Query: 103 TWYGWDGDR------LTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTL 156 Y G+ + I Y+ F + ++ A + + + T Sbjct: 2588 YTYSPKGNVENIKDYTGFDAGNDNYILRSYEYDLFDRVTHIKYANSDDPEKSKEEYKFTY 2647 Query: 157 QQSGGEDGGSVVFPPVLV----------QMLDRLESEILADRVSEESRRWLASCGLTVEQ 206 ++G + + D L D + +++ T ++ Sbjct: 2648 DKNGNILTEEIYNDYLTEAQDKIHVVKNYTYDELGRLTRVDVTDKLVNDSVSTTSYTYDK 2707 Query: 207 MQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEG-ATEWCAEYDEWGNLLNEENPHQLQQ 265 + N++ A++ + Y D L G YD GN E + + + Sbjct: 2708 VGNRLSKTRDGAKEDYEY-NDLN---ELLKVKSGENIIKEYSYDANGNTKKEVSGSKERN 2763 >UniRef50_Q1K295 YD repeat n=4 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1K295_DESAC Length = 1468 Score = 164 bits (415), Expect = 5e-39, Method: Composition-based stats. Identities = 83/338 (24%), Positives = 117/338 (34%), Gaps = 46/338 (13%) Query: 17 YDRHGRLTEKTDLIPEGVIRTDD-----------ERTHRYHYDSQHRLVHYTRTQYAEPL 65 YD G + + + + T + Y YD + R Sbjct: 1059 YDIQGNSLQLSTPQFDDLQLTYNQSGRLKTLSNSGTVSDYLYDGNN-----LRVVKDSDG 1113 Query: 66 VESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTI 125 V + Y YD GR +A+ + V WYG L I+ T Sbjct: 1114 VVTHYHYDLQGRLLAETDSDGTL----------RRAVVWYGDTPAALIDIEQSGPTFYTC 1163 Query: 126 YQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEIL 185 S T + T D D V+ +V + ES L Sbjct: 1164 TTTESLTGAAGPGMTLDTVTHTVVIEDGDYAGTYAISDENWQVYSSGIV-FIWSGESFRL 1222 Query: 186 ADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKI--------------HLYHCDHRGL 231 + + S L V Q ++ + K+ + H D G Sbjct: 1223 EGGFAPDYELPTRSGALFVYQEDDEGNSQVIDVYKLWKESESGGSTIATPYQVHTDQIGA 1282 Query: 232 PLALVSTEGATEWCAEYDEWGNLL----NEENPHQLQQLIRLPGQQYDEESGLYYNRHRY 287 P+ L G W A+Y +G + + ++ +R PGQ +D ESGL+YN HRY Sbjct: 1283 PILLTDATGTAVWSAQYAPFGQATINNDVDGDGTEVVCNLRFPGQYFDAESGLHYNWHRY 1342 Query: 288 YDPLQGRYITQDPIGLKGGWNFYQYPL-NPVQYIDSMG 324 Y+P GRYIT DPIGL GG N Y Y NPV +D G Sbjct: 1343 YEPRSGRYITLDPIGLAGGINLYAYANRNPVNVVDPTG 1380 Score = 59.8 bits (143), Expect = 2e-07, Method: Composition-based stats. Identities = 53/291 (18%), Positives = 83/291 (28%), Gaps = 53/291 (18%) Query: 8 ARDAHYLYRYDRHGRLTE----------KTDLIPEGVIRTDDE-RTHRYHYDSQHRLVHY 56 R Y YD GRL + + + + RTD Y YDS RL Sbjct: 766 GRGNSLTYSYDSAGRLIQTNQHGVITSYTYNSLGQLATRTDARAIVTEYSYDSLGRLTQL 825 Query: 57 TRTQYAEPLV----------------------ESRYLYDPLGRRVAKRVWRRERDLTGWM 94 + V Y YD LGR V+ + Sbjct: 826 HFPADSSQDVLYGYDAGTWGGGQLTSMQDAGGSHSYAYDSLGRLVSHTYTLQNTAYATGY 885 Query: 95 SLSRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLAD 154 S Y G+ +T + T Y G+ PL + + D Sbjct: 886 S---------YDATGNLVTLSYPGGFAVTTSYD-GNHRPLSIQAELGDQTLDILTQIGYD 935 Query: 155 TLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPV 214 T + G+ + L++ L+ ++EE R Q+ V Sbjct: 936 TNGRPVQWQHGNGLLTSAGYDGGGLLQNLTLSSHLAEEYSR------DGTGQLTALTRTV 989 Query: 215 YTPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQ 265 T + I+ Y D G + + + + YD GN L ++ Sbjct: 990 PTTGQDIYQY--DVVG--QLISADKNSILRTYSYDPVGNRLTLNEDGEIDT 1036 Score = 56.7 bits (135), Expect = 2e-06, Method: Composition-based stats. Identities = 48/311 (15%), Positives = 90/311 (28%), Gaps = 64/311 (20%) Query: 15 YRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYLYDP 74 Y YD +G + D Y +D+ RL+ T+ + Y YD Sbjct: 604 YTYDANG---------FPAQVIAPDGSVTTYSFDNGGRLL----TETDAGGYVTSYTYDN 650 Query: 75 LGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQPGSFTPL 134 GR K + + G+ L LT++ + ++ + L Sbjct: 651 AGRLAGKTMPGGDTTSYGYNVLGH-------------LTSVLHPDGTTTSLTYDHAGRLL 697 Query: 135 IRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSEESR 194 ++ G Q +L + G + + Q+ + D + + Sbjct: 698 SLID-GAGRSTHYQYNNLGQRTVSTDGNSNSTDYTSNFMDQL------TRITDPLGTVTD 750 Query: 195 RWLASCGLTVEQMQNQMDP--VYTPARKIHLYHCDHRGLPLALV-STEGA---------T 242 GL++ ++ + Y+ L + G+ + ++ G Sbjct: 751 LVYQDDGLSLAEVIDGRGNSLTYSYDSAGRLIQTNQHGVITSYTYNSLGQLATRTDARAI 810 Query: 243 EWCAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEESGLYYNRHRYYDPLQGRYIT-QDPI 301 YD G L P Q + YD + G+ + QD Sbjct: 811 VTEYSYDSLGRLTQLHFPADSSQDVLYG---YDAGTW-----------GGGQLTSMQD-- 854 Query: 302 GLKGGWNFYQY 312 GG + Y Y Sbjct: 855 --AGGSHSYAY 863 Score = 56.3 bits (134), Expect = 2e-06, Method: Composition-based stats. Identities = 54/304 (17%), Positives = 87/304 (28%), Gaps = 54/304 (17%) Query: 2 WPDNRIARDAH----YLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYT 57 W ++ + Y YD GRL T + T Y YD+ LV + Sbjct: 844 WGGGQLTSMQDAGGSHSYAYDSLGRLVSHTYTLQNTAYATG------YSYDATGNLVTLS 897 Query: 58 RTQYAEPLVESRY------------------------LYDPLGRRVAKRVWRRERDLTGW 93 V + Y YD GR V + G+ Sbjct: 898 YP--GGFAVTTSYDGNHRPLSIQAELGDQTLDILTQIGYDTNGRPVQWQHGNGLLTSAGY 955 Query: 94 MSLSRKPQVT-------WYGWDGD-RLTTIQND-RTRIQTIYQPGSFTPLIRVETATGEL 144 +T Y DG +LT + T Q IYQ L + + Sbjct: 956 DGGGLLQNLTLSSHLAEEYSRDGTGQLTALTRTVPTTGQDIYQYDVVGQL--ISADKNSI 1013 Query: 145 AKTQRRSLAD---TLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSEESRRWLASCG 201 +T TL + G D ++ + + + +E + S + Sbjct: 1014 LRTYSYDPVGNRLTLNEDGEIDTSTLATDSNQLLAVSGVNAESRLYDIQGNSLQLSTPQF 1073 Query: 202 LTVEQMQNQMDPVYT--PARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEEN 259 ++ NQ + T + + Y D L + ++G YD G LL E + Sbjct: 1074 DDLQLTYNQSGRLKTLSNSGTVSDYLYDGNNL-RVVKDSDG-VVTHYHYDLQGRLLAETD 1131 Query: 260 PHQL 263 Sbjct: 1132 SDGT 1135 Score = 53.3 bits (126), Expect = 2e-05, Method: Composition-based stats. Identities = 47/270 (17%), Positives = 79/270 (29%), Gaps = 40/270 (14%) Query: 9 RDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVES 68 + Y Y GRLT+ +D Y YDS R+V T + Sbjct: 410 DGRTWSYTY-SDGRLTQISD---------PAGNEKSYAYDSSGRVVQGTTPDGTRTI--- 456 Query: 69 RYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQN-DRTRIQTIYQ 127 YD + R T +G+D D+ T I D +T+Y Sbjct: 457 --SYD--------------DSTNESVITDRDGSQTIHGYDADQRTPIYTIDAQGGETLYT 500 Query: 128 PGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPP-----VLVQMLDRLES 182 S L + ++T S L G + + V + Sbjct: 501 YNSRNQLTST-SDQELRSRTSTYSTQGDLVTETDAAGITTSYTYNSNGDVTAVTDAMGNT 559 Query: 183 EILADRVSEESRRWLASCGLTVEQMQNQMDPVYTP---ARKIHLYHCDHRGLPLALVSTE 239 +A + + GL + N + + + + Y D G P +++ + Sbjct: 560 TQIAYDANGNPITVTLANGLQIINTYNSLGQLVSRQDVNGGVTGYTYDANGFPAQVIAPD 619 Query: 240 GATEWCAEYDEWGNLLNEENPHQLQQLIRL 269 G+ +D G LL E + Sbjct: 620 GSVT-TYSFDNGGRLLTETDAGGYVTSYTY 648 Score = 51.7 bits (122), Expect = 7e-05, Method: Composition-based stats. Identities = 66/364 (18%), Positives = 108/364 (29%), Gaps = 60/364 (16%) Query: 15 YRYDRHGRLTEK-----------------TDLIPEGVIRTDDERTHRYHYDSQHRLVHYT 57 Y YD GRLT+ T + D +H Y YDS RLV +T Sbjct: 814 YSYDSLGRLTQLHFPADSSQDVLYGYDAGTWGGGQLTSMQDAGGSHSYAYDSLGRLVSHT 873 Query: 58 RTQYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQN 117 T + Y YD G V T Y Sbjct: 874 YT-LQNTAYATGYSYDATGNLV------------TLSYPGGFAVTTSYD----------G 910 Query: 118 DRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQML 177 + + + G T I + + + + L S G DGG ++ L L Sbjct: 911 NHRPLSIQAELGDQTLDILTQIGYDTNGRPVQWQHGNGLLTSAGYDGGGLLQNLTLSSHL 970 Query: 178 DRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVS 237 S +++ +R + + + Y D G ++ Sbjct: 971 AEEYSRDGTGQLTALTRTVPTTGQDIYQYDVVGQLISADKNSILRTYSYDPVGN-RLTLN 1029 Query: 238 TEGATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQ-------QYDEESGLYYNRHRYYDP 290 +G + + LL + +L + G Q+D + L YN Sbjct: 1030 EDGEIDTSTLATDSNQLLAVSGVNAESRLYDIQGNSLQLSTPQFD-DLQLTYN------- 1081 Query: 291 LQGRYITQDPIGLKGGWNFYQYPLNPVQYI-DSMGLASKYGHLNNGGYGARPNKPPTPDP 349 GR T + G + Y Y N ++ + DS G+ + Y + G A + T Sbjct: 1082 QSGRLKT---LSNSGTVSDYLYDGNNLRVVKDSDGVVTHYHYDLQGRLLAETDSDGTLRR 1138 Query: 350 SKLP 353 + + Sbjct: 1139 AVVW 1142 >UniRef50_D0THP1 YD repeat protein n=1 Tax=Bacteroides sp. 2_1_33B RepID=D0THP1_9BACE Length = 1399 Score = 164 bits (415), Expect = 6e-39, Method: Composition-based stats. Identities = 71/337 (21%), Positives = 128/337 (37%), Gaps = 46/337 (13%) Query: 12 HYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVES--- 68 +L YD+ G + + D + +R+ Y YD +L + R + ++ + Sbjct: 926 DFLMTYDKTGNMLARLDQLHP-------DRSEMYGYDKIQQLTSFQRGEVKNGVITTPAR 978 Query: 69 --RYLYDPLGRRVAKRVWRRERDLTGWMS--LSRKPQVTWYGWDGDRLTTIQNDRTRIQT 124 + YD LG R++ + T + + D+ + ND + Sbjct: 979 TQIFRYDALGNRLSVQEDGVTTTYTANAQNEYTSIQGGLNFTPQYDQNGNMLNDDSHT-- 1036 Query: 125 IYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEI 184 YQ L++V+ E A +L ++++ G+V+F Sbjct: 1037 -YQYDYNNKLVQVD---AETASYAYDALGRRIRKTTA--DGTVLFYYA------------ 1078 Query: 185 LADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARK--IHLYHCDHRGLPLALVSTEGAT 242 D V EE R A L + N +D + RK + YH +H G + + G Sbjct: 1079 -GDDVIEEQDRSKAL--LATYLLGNGIDDMIKMNRKGNEYFYHTNHLGSVMGVTDRSGEV 1135 Query: 243 EWCAEYDEWGNLLNEE------NPHQLQQLIRLPGQQYDEESGLYYNRHRYYDPLQGRYI 296 + EYD +G + + +++ + G+ YD E+ Y R R +P GR++ Sbjct: 1136 QERYEYDPFGKVSSSNVEGVLLAKSRIENDVLFTGRNYDTETENYDYRARVMNPSIGRFV 1195 Query: 297 TQDPIGLKGGWNFYQY-PLNPVQYIDSMGLASKYGHL 332 DP+ G N Y Y N + D GL+S ++ Sbjct: 1196 QSDPLLYVDGMNSYSYVVNNSLNLKDIWGLSSCEDNI 1232 Score = 68.3 bits (165), Expect = 7e-10, Method: Composition-based stats. Identities = 43/240 (17%), Positives = 77/240 (32%), Gaps = 25/240 (10%) Query: 16 RYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYLYDPL 75 YD +G + +TD + RT Y YD +R V T Y YD Sbjct: 638 AYDANGNVLTQTD---------GEGRTVTYQYDGLNRRVSSTDPSGN----IEYYTYDRN 684 Query: 76 GRRVAKRVWRRERDLTGWMSLSRKPQVT-------WYGWDGDRLTTIQNDRTRIQTIYQP 128 +++ +++ G+ +L+R +VT Y +DG+ D +T Y Sbjct: 685 SNQLSFTNRNGDKEAYGYDALNRLIEVTDALSNKTRYQYDGEGNLIAATDAKGNKTTYTY 744 Query: 129 GSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADR 188 + + A G + + + +QQ + L Q++++L + D+ Sbjct: 745 DALGQNTHITFANGTTLEYAYDQMGNVIQQKKRDGAKIKFAYDALDQLVEKLYPDGTTDK 804 Query: 189 VSEESRRWLASCGLTVEQMQNQMD-----PVYTPARKIHLYHCDHRGLPLALVSTEGATE 243 L S + D T ++ Y D L G Sbjct: 805 YGYNEIGQLISAVNKNATVTLAYDKAGRLTAETLNSQVTAYSYDVPNRKRILTYPSGKKV 864 Score = 65.2 bits (157), Expect = 5e-09, Method: Composition-based stats. Identities = 45/285 (15%), Positives = 85/285 (29%), Gaps = 48/285 (16%) Query: 8 ARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHR------------YHYDSQHRLVH 55 Y+YD R TD T D +++ Y YD+ +RL+ Sbjct: 651 GEGRTVTYQYDGLNRRVSSTDPSGNIEYYTYDRNSNQLSFTNRNGDKEAYGYDALNRLIE 710 Query: 56 YTRTQYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTW-------YGWD 108 T ++RY YD G +A + + + +L + +T+ Y +D Sbjct: 711 VTDALSN----KTRYQYDGEGNLIAATDAKGNKTTYTYDALGQNTHITFANGTTLEYAYD 766 Query: 109 --GDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGS 166 G+ + + D +I+ Y + L+ G K + + + Sbjct: 767 QMGNVIQQKKRDGAKIKFAYD--ALDQLVEKLYPDGTTDKYGYNEIGQLISAVNKNATVT 824 Query: 167 VVFPPVLVQMLDRLESEILADR--VSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLY 224 + + + L S++ A V R G V Q N D + Sbjct: 825 LAYDKAGRLTAETLNSQVTAYSYDVPNRKRILTYPSGKKVMQTMNVRDQIVE-------- 876 Query: 225 HCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRL 269 + +G Y++ G L + + Sbjct: 877 -----------IQEDGTVVVNQTYNKAGQLATRAYNNGITTKYEY 910 Score = 64.4 bits (155), Expect = 1e-08, Method: Composition-based stats. Identities = 43/322 (13%), Positives = 85/322 (26%), Gaps = 61/322 (18%) Query: 4 DNRIARDAH----YLYRYDRHGRLTEKTDLIPEG-------------VIRTDDERTHRYH 46 DN I R Y YD +G + TD R + + + Sbjct: 348 DNVIKRTDANGNIRTYTYDSNGNMLTATDPEGHTETYTYESKFNQVASYRDKNGNGYSFT 407 Query: 47 YDSQHRLVHYTRTQYAEPLVESRYLY----------DPLGRRVAKRVWRRERDLTGWMSL 96 YD+ L + + RY Y D G + ++ + Sbjct: 408 YDNVGNLTIISGPEGFSN----RYTYNAMGAPLTITDANGNVTQNEYDNQGLQISQTDAA 463 Query: 97 SRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTL 156 + +DG D + Y + LIR+ A + + + Sbjct: 464 GN---TRRFTYDGSGNMVSSTDARQFVVQYTYNARNELIRLTDALKGTIEFSYDRNGNVV 520 Query: 157 QQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSEESR----RWLASCGLTVEQMQNQMD 212 + + + L L + + + + + G + ++ D Sbjct: 521 RIKDAKGRITANTYDALGNPLSMINPAGRSITYTYNRKSKPIQIKDEAGNVTQYDYDEHD 580 Query: 213 PVYT---PARKIHLYHCDHRGLPLALVSTEGA--------------------TEWCAEYD 249 V A ++ + D +G L+++ G YD Sbjct: 581 RVIRMVNAANEVTSFAYDTKGNLLSMILPNGNSITYSYTANDLMNETTDALGVISTQAYD 640 Query: 250 EWGNLLNEENPHQLQQLIRLPG 271 GN+L + + + G Sbjct: 641 ANGNVLTQTDGEGRTVTYQYDG 662 Score = 58.3 bits (139), Expect = 7e-07, Method: Composition-based stats. Identities = 40/265 (15%), Positives = 79/265 (29%), Gaps = 35/265 (13%) Query: 12 HYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYL 71 + YD G + TD V +Y Y++++ L+ T + Sbjct: 466 TRRFTYDGSGNMVSSTDARQFVV---------QYTYNARNELIRLTDALKG----TIEFS 512 Query: 72 YDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQPGSF 131 YD G V R +D G ++ + Y G+ L+ I I Y S Sbjct: 513 YDRNGNVV------RIKDAKGRITAN------TYDALGNPLSMINPAGRSITYTYNRKS- 559 Query: 132 TPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRL----ESEILAD 187 I+++ G + + ++ + + +L + S + Sbjct: 560 -KPIQIKDEAGNVTQYDYDEHDRVIRMVNAANEVTSFAYDTKGNLLSMILPNGNSITYSY 618 Query: 188 RVSEESRRWLASCGLTVEQMQNQMDPVYTPA---RKIHLYHCDHRGLPLALVSTEGATEW 244 ++ + G+ Q + V T + Y D ++ G Sbjct: 619 TANDLMNETTDALGVISTQAYDANGNVLTQTDGEGRTVTYQYDGLNRRVSSTDPSGNI-E 677 Query: 245 CAEYDEWGNLLNEENPHQLQQLIRL 269 YD N L+ N + ++ Sbjct: 678 YYTYDRNSNQLSFTNRNGDKEAYGY 702 Score = 55.6 bits (132), Expect = 4e-06, Method: Composition-based stats. Identities = 55/336 (16%), Positives = 84/336 (25%), Gaps = 87/336 (25%) Query: 11 AHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRT----------- 59 Y+YD RLT+ TD + T Y YD Q +L T Sbjct: 230 GEISYQYDSRRRLTKVTDPM---------GYTLSYGYDKQDQLTSVTDPMGNITEVGYTN 280 Query: 60 ----------------------------QYAEPLVE-SRYLYDPLGRRVAKR-------- 82 Y EP + S Y++D GR + K Sbjct: 281 QGAVYRVKTAVSDKVIRYEVANKRTVIIDYTEPAAQFSYYIWDEQGRVIEKSGLCCGIQE 340 Query: 83 --VWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETA 140 V+ + ++ + + Y +G+ LT + Y+ F + Sbjct: 341 KLVYDTDDNVIKRTDANGNIRTYTYDSNGNMLTATDPEGHTETYTYE-SKFNQVASYRDK 399 Query: 141 TGELAKTQRRSLA--------------DTLQQSGGEDGGSVVFPPVLVQMLDRLESEILA 186 G ++ T G + V D +I Sbjct: 400 NGNGYSFTYDNVGNLTIISGPEGFSNRYTYNAMGAPLTITDANGNVTQNEYDNQGLQISQ 459 Query: 187 DRVSEESRRWLA--SCGLTVEQMQNQMDPVYT-PARKIHLYHCDHR-GLPLALVSTEGAT 242 + +RR+ S + Q YT AR + D G G Sbjct: 460 TDAAGNTRRFTYDGSGNMVSSTDARQFVVQYTYNARNELIRLTDALKGTIEFSYDRNGNV 519 Query: 243 EW---------CAEYDEWGNLLNEENPHQLQQLIRL 269 YD GN L+ NP Sbjct: 520 VRIKDAKGRITANTYDALGNPLSMINPAGRSITYTY 555 Score = 51.7 bits (122), Expect = 6e-05, Method: Composition-based stats. Identities = 38/219 (17%), Positives = 62/219 (28%), Gaps = 32/219 (14%) Query: 5 NRIARDAH-----YLYRYDRHGRLTEKTDLIPEGVIRTDD------------ERTHRYHY 47 NR+ Y+YD G L TD T D T Y Y Sbjct: 706 NRLIEVTDALSNKTRYQYDGEGNLIAATDAKGNKTTYTYDALGQNTHITFANGTTLEYAY 765 Query: 48 DSQHRLVHYTRTQYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLS------RKPQ 101 D ++ + A + ++ YD L + V K D G+ + K Sbjct: 766 DQMGNVIQQKKRDGA----KIKFAYDALDQLVEKLYPDGTTDKYGYNEIGQLISAVNKNA 821 Query: 102 VTWYGWD-GDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSG 160 +D RLT + Y R+ T Q ++ D + + Sbjct: 822 TVTLAYDKAGRLTAETLNSQVTAYSYD---VPNRKRILTYPSGKKVMQTMNVRDQIVEIQ 878 Query: 161 GEDGGSVVFPP-VLVQMLDRLESEILADRVSEESRRWLA 198 + V Q+ R + + + WL+ Sbjct: 879 EDGTVVVNQTYNKAGQLATRAYNNGITTKYEYNKNGWLS 917 >UniRef50_D0KES8 RHS protein n=3 Tax=Pectobacterium wasabiae WPP163 RepID=D0KES8_PECWW Length = 307 Score = 164 bits (415), Expect = 6e-39, Method: Composition-based stats. Identities = 61/219 (27%), Positives = 92/219 (42%), Gaps = 13/219 (5%) Query: 145 AKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTV 204 A+ +L +++ + RL L R ++ + +L + Sbjct: 2 ARYGYDALGRRTRKTVTWGDSGKQEETRFLWEGFRL----LQARQADRTESYLYDPTIWW 57 Query: 205 EQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEE------ 258 + P I ++ + G PL + EGA W +Y +G + + Sbjct: 58 SPLARITQQPGAPDGDIRWFNTELDGAPLEMTDAEGAVRWSGDYGSFGAVNGQTQDSEGL 117 Query: 259 --NPHQLQQLIRLPGQQYDEESGLYYNRHRYYDPLQGRYITQDPIGLKGGWNFYQYPLNP 316 Q +R GQ DEE+GL+YN RYYDP GR+ TQDPIGL GG N YQY NP Sbjct: 118 RHGKQAESQSLRYAGQYADEETGLHYNLFRYYDPTVGRFTTQDPIGLAGGINLYQYAPNP 177 Query: 317 VQYIDSMGLASKYGHLNNGGYGAR-PNKPPTPDPSKLPD 354 + +ID +GLA G ++ NK P ++ D Sbjct: 178 LTWIDPLGLACTKGFNRKNNIASKWVNKLSGKKPDQVHD 216 >UniRef50_A9EVR3 Conserved carbohydrate-binding protein, Rhs family n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=A9EVR3_SORC5 Length = 1367 Score = 164 bits (415), Expect = 7e-39, Method: Composition-based stats. Identities = 75/318 (23%), Positives = 108/318 (33%), Gaps = 51/318 (16%) Query: 11 AHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVES-- 68 + +DR GRL + P G + R+ D R +++ Sbjct: 968 GARTFEHDRAGRLLS--ERSPRGDVARP---LRRFSADELAEERASARFGPGSRVIDHAG 1022 Query: 69 -RYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQ 127 RY YD GR K R + + W+G L +++ Sbjct: 1023 VRYTYDAAGRLQTKE---------------RDGRRWSFHWNGHGLLRRVELPDGRAALFE 1067 Query: 128 PGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILAD 187 +F R A + + G V + L EI Sbjct: 1068 YDAF-----------------ARRTAKRIVRCGSSGEEVVDSETRFLWDGHTLLHEI--- 1107 Query: 188 RVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWCAE 247 + W GL + + V++ DH G P L T G W AE Sbjct: 1108 SIKHGLTTWYWEPGLFAPVARERGGQVWS-------VIPDHLGAPTTLFDTSGVQVWAAE 1160 Query: 248 YDEWGNLLNEENPHQLQQLIRLPGQQYDEESGLYYNRHRYYDPLQGRYITQDPIGLKGGW 307 D G E+ + R PGQ D E+GLYYNR RYYDP G Y++ DP+GL G Sbjct: 1161 TDTLGRTAVEQGAPE-DCPWRWPGQYEDPETGLYYNRFRYYDPDAGNYVSPDPLGLLAGT 1219 Query: 308 NFYQYPLNPVQYIDSMGL 325 Y Y + + + D +GL Sbjct: 1220 AEYAYAPDSLVWFDPLGL 1237 Score = 57.5 bits (137), Expect = 1e-06, Method: Composition-based stats. Identities = 52/296 (17%), Positives = 80/296 (27%), Gaps = 35/296 (11%) Query: 3 PDNRIARDAHYLYRYDRHGRLTEKTDLIPEG-----------VIRTDDERTHRYHYDSQH 51 P R AH YRYD G L +D + + + + YD Sbjct: 405 PRGR-GFAAHRQYRYDDQGDLVAVSDALGHEWRFEYVTHLLVRETDRNGLSFYFAYDGLG 463 Query: 52 RLVHYTRTQYAEPLVESRYLYDPLGR--RVAKRVWRRERDLTGWMSL-----SRKPQVTW 104 RT + + R YD GR V + R + L T Sbjct: 464 EDAFCVRTWGDGGIYDHRLQYDKRGRVTVVTDSLGNTTRYYMNVVGLVTKIVDPLGGTTE 523 Query: 105 YGWDGDRLTTIQN---DRTRIQTIYQP--------GSFTPLIRVETATGELAKTQRRSLA 153 Y D L + ++ Y +R+E G +L Sbjct: 524 YQVDPTTLQRTREVDPAGVAVERRYDDRGNLIELADGVGSKVRLEYDRGGRPVRAVDALG 583 Query: 154 DTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDP 213 + E+G V L + L ++ RR + ++ Sbjct: 584 GEWRWEYDENGSLVRRVNPLGEATYLTWDRGLLVALALPDRRKI----HVEYDEHKEIRE 639 Query: 214 VYTPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRL 269 + + Y D RG +A GA A YD G L + + R Sbjct: 640 IRSGGSGKSTYERDERGRLIAARDPRGAVVTTA-YDAEGRTLERRSRSGAAERHRY 694 Score = 55.2 bits (131), Expect = 5e-06, Method: Composition-based stats. Identities = 44/262 (16%), Positives = 74/262 (28%), Gaps = 27/262 (10%) Query: 16 RYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESR--YLYD 73 YD GRL +R R +D + RLV + Y YD Sbjct: 369 AYDARGRL---------EWVRDSAGRLVWLEHDDEDRLVALNLPLPRGRGFAAHRQYRYD 419 Query: 74 PLGRRVAKRVWRRERDLTGWM------SLSRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQ 127 G VA ++ R ++ +DG + D ++T Sbjct: 420 DQGDLVAVSDALGHEWRFEYVTHLLVRETDRNGLSFYFAYDG-----LGEDAFCVRTWGD 474 Query: 128 PGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILAD 187 G + ++ + T + +V P + + Sbjct: 475 GGIYDHRLQYDKRGRVTVVTDSLGNTTRYYMNVVGLVTKIVDPLGGTTEYQVDPTTLQRT 534 Query: 188 RVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWCAE 247 R + + + + D V + R + D G P+ V G W E Sbjct: 535 REVDPAGVAVERRYDDRGNLIELADGVGSKVRLEY----DRGGRPVRAVDALGGE-WRWE 589 Query: 248 YDEWGNLLNEENPHQLQQLIRL 269 YDE G+L+ NP + Sbjct: 590 YDENGSLVRRVNPLGEATYLTW 611 Score = 52.9 bits (125), Expect = 3e-05, Method: Composition-based stats. Identities = 40/246 (16%), Positives = 65/246 (26%), Gaps = 33/246 (13%) Query: 6 RIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPL 65 R Y D GRL R YD++ R T + + Sbjct: 641 RSGGSGKSTYERDERGRLI---------AARDPRGAVVTTAYDAEGR----TLERRSRSG 687 Query: 66 VESRYLYDPLGRRV-----AKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRT 120 R+ YDP G V A+R+ + S + +D + + Sbjct: 688 AAERHRYDPEGHLVEIDSDARRIKLEYGHFHRLVRRSEGGGEISFHYDSEGHLLAARNEY 747 Query: 121 RIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRL 180 Q ++ + + +G + RR A + + G + L R+ Sbjct: 748 GEQYLFTYDASGNVATETRFSGGTWR-YRRDAAGRVGAAVDPAGSTSTMTYDAAGRLARV 806 Query: 181 ESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEG 240 D + +E QN+ H D G LA V G Sbjct: 807 ------DHGDGTFLEFRYRADGELEWAQNEHSETSC--------HRDAIGRILAEVQPAG 852 Query: 241 ATEWCA 246 Sbjct: 853 RVASTY 858 Score = 51.3 bits (121), Expect = 7e-05, Method: Composition-based stats. Identities = 45/265 (16%), Positives = 70/265 (26%), Gaps = 25/265 (9%) Query: 16 RYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYLYDPL 75 RYD G L E D + V R YD R V E R+ YD Sbjct: 547 RYDDRGNLIELADGVGSKV---------RLEYDRGGRPVRAVDALGG----EWRWEYDEN 593 Query: 76 GRRVAKRVWRRERDLTGWMS------LSRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQPG 129 G V + E W + +D + ++ Y+ Sbjct: 594 GSLVRRVNPLGEATYLTWDRGLLVALALPDRRKIHVEYDEHKEIREIRSGGSGKSTYERD 653 Query: 130 SFTPLIRVETATGELAKTQRRSLADTLQQ---SGGEDGGSVVFPPVLVQMLDRLESEILA 186 LI G + T + TL++ SG + LV++ L Sbjct: 654 ERGRLIAARDPRGAVVTTAYDAEGRTLERRSRSGAAERHRYDPEGHLVEIDSDARRIKLE 713 Query: 187 DRVSEESRRWLASCGLTVEQMQNQMDPVYTPAR--KIHLYHCDHRGLPLALVSTEGATEW 244 R G ++ + + +L+ D G G T W Sbjct: 714 YGHFHRLVRRSEGGGEISFHYDSEGHLLAARNEYGEQYLFTYDASGNVATETRFSGGT-W 772 Query: 245 CAEYDEWGNLLNEENPHQLQQLIRL 269 D G + +P + Sbjct: 773 RYRRDAAGRVGAAVDPAGSTSTMTY 797 >UniRef50_C4KA75 YD repeat protein n=1 Tax=Thauera sp. MZ1T RepID=C4KA75_THASP Length = 1892 Score = 163 bits (413), Expect = 1e-38, Method: Composition-based stats. Identities = 84/370 (22%), Positives = 128/370 (34%), Gaps = 66/370 (17%) Query: 12 HYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVE---- 67 Y Y +D G L P G + R+ YD +++LV + ++ Sbjct: 1121 DYQYVWDPEGNLLHARRREPGGPL-PSTRRSQ--AYDLRNQLVASVEWRDDGDVLAETAV 1177 Query: 68 SRYLYDPLGRRV-AKRVWRRERDLTGWMSLSR---------------------------- 98 RY YD RRV A+ +++L G + Sbjct: 1178 WRYAYDRHQRRVLAQEGVVSQQELAGHTRPTHFAPGSHRALSSSPRAANVPARAAASRPH 1237 Query: 99 ----------KPQVTWYG-----WDGD-RLTTIQNDRTRIQTIYQPGSFTPLIRVETATG 142 Q +G WD RL + I + R Sbjct: 1238 EAATPGHHDASGQPERFGTRSLRWDALGRLIEVHAGDRSIARYAYDHRGLRIERTRFDPA 1297 Query: 143 ELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLD----RLESEILADRVSEESRRWLA 198 +A T ++ D +Q E + + D L++ D ++ +RR LA Sbjct: 1298 MVAPTTTHTVYDDARQPLAELDADGRLIRQYLWLADLPLAVLDTPARPDSATDSARRILA 1357 Query: 199 SCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEE 258 G + P + H +H G P +G W A + +G Sbjct: 1358 DLGRIAQSWL-------APQAGLAWLHTNHLGAPELATDADGEPLWRARHAPFGAATVTT 1410 Query: 259 NPH--QLQQLIRLPGQQYDEESGLYYNRHRYYDPLQGRYITQDPIGLKGGWNFYQYPL-N 315 +P +RLPGQ +D E+GL+YNR RYY P G Y+T DP+G G N Y Y N Sbjct: 1411 SPRHPDFTLDLRLPGQVFDAETGLHYNRRRYYAPTLGEYLTPDPLGTPDGPNPYAYAAFN 1470 Query: 316 PVQYIDSMGL 325 P++ +D GL Sbjct: 1471 PLRNVDPDGL 1480 Score = 46.7 bits (109), Expect = 0.002, Method: Composition-based stats. Identities = 39/229 (17%), Positives = 60/229 (26%), Gaps = 30/229 (13%) Query: 23 LTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYLYDPLGRRVAKR 82 K D + R+ D +D+ RLV +RY +DP GR +A+ Sbjct: 836 RILKDDFGRPVLERSPDAGARWRSFDAAGRLVAMGDALGH----RARYTWDPRGRILAQE 891 Query: 83 VWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQP-------------- 128 V T + T + +DG RL + + + R + Y Sbjct: 892 VTDGRNGST---------ETTRWRYDGSRLLEVDHPKGRERYEYDQRGLRSARIVSLKRD 942 Query: 129 -GSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILAD 187 G + R E L+ G V V Sbjct: 943 GGELVVVTRYEYDAEGHLVATTLPDGSRLRYERNGQGQVVALKRQPVATPWLRALAREQV 1002 Query: 188 RVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYH--CDHRGLPLA 234 S R G + + + H D RG P+ Sbjct: 1003 IASAFQRDLFGLRGFRAGNGMRTLHERTRTGTLVRVVHLRADERGAPVR 1051 Score = 44.4 bits (103), Expect = 0.009, Method: Composition-based stats. Identities = 40/278 (14%), Positives = 74/278 (26%), Gaps = 53/278 (19%) Query: 11 AHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRY 70 Y YD+ G + + + RY YD++ LV T + RY Sbjct: 920 GRERYEYDQRGLRSARIVSLKRDGGELV--VVTRYEYDAEGHLVATTLPDGS----RLRY 973 Query: 71 LYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWD----GDRLTTIQNDRTRIQTIY 126 + G+ VA +R+ T W+ + QV + G R N + Sbjct: 974 ERNGQGQVVA---LKRQPVATPWLRALAREQVIASAFQRDLFGLRGFRAGNGMRTLHERT 1030 Query: 127 QPGSFTPLIRVETATGELAKTQRRSLA------------DTLQQSGGEDGGSVVFPPVLV 174 + G+ ++ + R+L + L + Sbjct: 1031 RTGTLVRVVHLRADERGAPVRNARALLPIAPGQPLATRIERLFGISAAHAAQANTDADVT 1090 Query: 175 QMLDRLESEILADRVS--------------EESRRWLASCGLTVEQMQNQMDPVYTPARK 220 Q ++ + + L + + W L + + P+ + R Sbjct: 1091 QPVEAADGQALEGALPRLQETVASADTILLDYQYVWDPEGNLLHARRREPGGPLPSTRRS 1150 Query: 221 IHLYHCDHR---------GLPLALVSTEGATEWCAEYD 249 + G LA W YD Sbjct: 1151 QAYDLRNQLVASVEWRDDGDVLAET-----AVWRYAYD 1183 >UniRef50_A0LQM7 NHL repeat containing protein n=1 Tax=Syntrophobacter fumaroxidans MPOB RepID=A0LQM7_SYNFM Length = 1763 Score = 163 bits (413), Expect = 1e-38, Method: Composition-based stats. Identities = 74/321 (23%), Positives = 110/321 (34%), Gaps = 40/321 (12%) Query: 19 RHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYLYDPLGRR 78 GR+ KT+ + + Y YDS RL+ R Y YD G R Sbjct: 1396 AAGRIATKTETVN------GSTVEYAYEYDSLGRLLAVRRDGVP----AEEYRYDANGNR 1445 Query: 79 VAKRVW------RRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQPGSFT 132 + R L+ V Y DG LTT + +Y S Sbjct: 1446 TQETNTLLGIIGRTSTYSEEDHLLTSGGTVYRYDADGF-LTTRTEGSAVTRYVYS--SRG 1502 Query: 133 PLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILA--DRVS 190 L+ V G+ + L + V + + L + + +LA Sbjct: 1503 ELLSVTLPDGKRIEYVNDPLGRRI--------AKKVNGTITQKYLWQGRTRLLAVFGGND 1554 Query: 191 EESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDE 250 + R+ + G +T + D G + GA YD Sbjct: 1555 DLILRFRYADGRMP--------LSFTKGGTEYSLSYDQVGTLRTVTDASGAVVKELVYDS 1606 Query: 251 WGNLLNEENPHQLQQLIRLPGQQYDEESGLYYNRHRYYDPLQGRYITQDPIGLKGG-WNF 309 +GNL+ + NP G +D ++GL R YDP GR+ +DPIG GG N Sbjct: 1607 FGNLIGDTNPGFYV-PFGFAGGLHDPDTGLVRFGFRDYDPEVGRWTAKDPIGFGGGDTNL 1665 Query: 310 YQYP-LNPVQYIDSMGLASKY 329 Y Y +P+ ++DS GL Y Sbjct: 1666 YGYCLSDPINWVDSHGLKEHY 1686 Score = 57.5 bits (137), Expect = 1e-06, Method: Composition-based stats. Identities = 46/240 (19%), Positives = 77/240 (32%), Gaps = 28/240 (11%) Query: 4 DNRIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAE 63 D R+ + YD GR T ER + YD Q RL T Sbjct: 1112 DLRVPGYLDKSFGYDTRGRPTSIVI----------GERETKLAYDDQGRLGSVTDPGN-- 1159 Query: 64 PLVESRYLYDPLGR-----RVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQND 118 + Y YD +GR R DL G +++ P T + + +R+ + Sbjct: 1160 --RTTSYAYDAVGRTTGVSRPDGSTIGFSYDLNGNITVLANPAGTPHAFGYNRVNLNGSY 1217 Query: 119 RT--RIQTIYQPGSFTPLIRVETATG-ELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQ 175 +T +Y L RV +G E+ ++ ++ G + + Sbjct: 1218 QTPLSGSYLYSYDRDRRLTRVLFPSGKEIRNVYEKANLARVETPEGNIEYGYLCSGRFPE 1277 Query: 176 MLDRLESEIL--ADRVSEESRRWLASCGLTV----EQMQNQMDPVYTPARKIHLYHCDHR 229 ++R I D S + + G T+ ++ Y A + H Y D Sbjct: 1278 SINRGGEGIAYGYDGPLVTSETFSGTLGGTLKYSYDEYYRVTLLSYAGATESHTYDNDGL 1337 Score = 50.2 bits (118), Expect = 2e-04, Method: Composition-based stats. Identities = 34/126 (26%), Positives = 45/126 (35%), Gaps = 31/126 (24%) Query: 7 IARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLV 66 + +YRYD G LT RT+ RY Y S+ L+ T Sbjct: 1468 LLTSGGTVYRYDADGFLT----------TRTEGSAVTRYVYSSRGELLSVTLPDG----K 1513 Query: 67 ESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDG-DRLTTI--QNDRTRIQ 123 Y+ DPLGRR+AK+V Y W G RL + ND ++ Sbjct: 1514 RIEYVNDPLGRRIAKKV--------------NGTITQKYLWQGRTRLLAVFGGNDDLILR 1559 Query: 124 TIYQPG 129 Y G Sbjct: 1560 FRYADG 1565 Score = 41.3 bits (95), Expect = 0.077, Method: Composition-based stats. Identities = 49/313 (15%), Positives = 83/313 (26%), Gaps = 41/313 (13%) Query: 9 RDAHYLYRY--DRHGRLTEKTD------LIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQ 60 + + + D G+LT+ D + V T + R + L Y Sbjct: 922 QQGGNRFEHGFDAAGKLTDIIDEEGGHWRYSQKVTSTGEIRAEMLT--GEGNLTSYVDKN 979 Query: 61 YAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWD---GDRLTTIQN 117 + S DP G R + W + + Y +D G R T Sbjct: 980 DGSGIFTSTIT-DPNGAATFYRSFPAAFQDLKWSACGLLLEF-RYDYDPQYGFRFTRQLR 1037 Query: 118 DRTRIQTI---------YQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVV 168 + T + Y+ + T T + + DT+Q Sbjct: 1038 EHTTTGFLDRITERYRTYEDTDSNGVPDRITETVAVNGKATTLVHDTVQHRKTLTSPQGR 1097 Query: 169 FPPVLVQMLDRLESEILADRVSEESRRWLASCGLT-----------VEQMQNQMDPVYTP 217 L +++ ++S + T Q ++ V P Sbjct: 1098 TVTSFYDPHTLLTTDLRVPGYLDKSFGYDTRGRPTSIVIGERETKLAYDDQGRLGSVTDP 1157 Query: 218 ARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRL-----PGQ 272 + Y D G + +G+T YD GN+ NP G Sbjct: 1158 GNRTTSYAYDAVGRTTGVSRPDGSTIG-FSYDLNGNITVLANPAGTPHAFGYNRVNLNGS 1216 Query: 273 QYDEESGLYYNRH 285 SG Y + Sbjct: 1217 YQTPLSGSYLYSY 1229 >UniRef50_UPI0001C34A7C Rhs family protein n=1 Tax=Neisseria subflava NJ9703 RepID=UPI0001C34A7C Length = 335 Score = 163 bits (413), Expect = 1e-38, Method: Composition-based stats. Identities = 50/152 (32%), Positives = 76/152 (50%), Gaps = 4/152 (2%) Query: 182 SEILADRVSEESRRWLASCG---LTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVST 238 S +L + + ++ + + Q+ N + ++ H +HCD G+P + Sbjct: 37 SHLLQEVHPDGRYTYIYTDPDSYEPLAQVHNWTNEEGESRQQTHYFHCDQIGIPREMTDE 96 Query: 239 EGATEWCAEYDEWGNLLNEEN-PHQLQQLIRLPGQQYDEESGLYYNRHRYYDPLQGRYIT 297 +G W Y WG L +E N Q RL Q D E+GL+YN RYY+P GR++ Sbjct: 97 DGNLLWFGNYTGWGKLKSETNISGTAHQPFRLQNQYCDRETGLHYNFFRYYEPDAGRFVN 156 Query: 298 QDPIGLKGGWNFYQYPLNPVQYIDSMGLASKY 329 QDPIGL GG NFY + N +++D +GL K Sbjct: 157 QDPIGLFGGSNFYMFAFNISRWLDPLGLKGKS 188 Score = 62.9 bits (151), Expect = 2e-08, Method: Composition-based stats. Identities = 34/168 (20%), Positives = 57/168 (33%), Gaps = 15/168 (8%) Query: 70 YLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTIY-QP 128 Y YD LGRR+ K + ++++ + + T + WDG L + R IY P Sbjct: 2 YSYDALGRRIGKGRLKTSQEVSDDLE-----EETGFVWDGSHLLQEVHPDGRYTYIYTDP 56 Query: 129 GSFTPLIRV------ETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLES 182 S+ PL +V E + + ++ EDG + F +L+S Sbjct: 57 DSYEPLAQVHNWTNEEGESRQQTHYFHCDQIGIPREMTDEDGNLLWFGNYTGW--GKLKS 114 Query: 183 EILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRG 230 E + + R + Y P + D G Sbjct: 115 ETNISGTAHQPFRLQNQYCDRETGLHYNFFRYYEPDAG-RFVNQDPIG 161 >UniRef50_B8FIJ1 YD repeat protein n=1 Tax=Desulfatibacillum alkenivorans AK-01 RepID=B8FIJ1_DESAA Length = 1630 Score = 163 bits (413), Expect = 1e-38, Method: Composition-based stats. Identities = 74/364 (20%), Positives = 122/364 (33%), Gaps = 47/364 (12%) Query: 14 LYRYDRHGRLTEKTDLIPEGVIRTD-DERTHRYHYDSQHRLVHYTRT------QYAEPLV 66 LY YD G +RTD + ++ YD+ RL + R + P Sbjct: 1118 LYGYDHEGNRL--------YALRTDMAALSQQFTYDNAQRLTEFRRGPPNDSHEIPSPDF 1169 Query: 67 ESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKP-QVTWYGWDGDRLTTIQNDRTRIQTI 125 E + D LG + + T + T Y +D + + Sbjct: 1170 EKDWTLDSLGNWTSVTTNSVTENRTPNVMSQYTDVGGTSYSYDSN------------GNL 1217 Query: 126 YQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEIL 185 G +T E ++ + + V V + + I Sbjct: 1218 INDGVYTYTYDYENQLTKVTRNSDSQVMAEFTVDALNRRVKKVAGGVTTEYIYDDSRVIE 1277 Query: 186 ADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWC 245 + ++ L + ++ + YH D G +AL + GA Sbjct: 1278 EKVSGVVTAHYVYGMRLDEPVLMHR-------GVQDLYYHADVLGSTIALTDSTGAVVET 1330 Query: 246 AEYDEWGNLL------NEENPHQLQQLIRLPGQQYDEESGLYYNRHRYYDPLQGRYITQD 299 Y +G + + + GQ+YDEE+GLYY R RY P GR++ D Sbjct: 1331 YRYTPYGQVSFFDGNGSSISQSNESNPFLFTGQRYDEETGLYYYRARYLHPELGRFLNPD 1390 Query: 300 PIGLKGGWNFYQYP-LNPVQYIDSMGLASKYGHLNNGGYGARPNKPPTPDPSKLPDIAKQ 358 P G G N Y+Y NP +Y+D G A++ + + K PD +AK+ Sbjct: 1391 PKGFVDGMNLYEYAMSNPARYVDPRGTATEECSGASFSFDGALLKKYLPDF-----VAKR 1445 Query: 359 LRLP 362 + P Sbjct: 1446 MGEP 1449 Score = 68.7 bits (166), Expect = 5e-10, Method: Composition-based stats. Identities = 39/267 (14%), Positives = 79/267 (29%), Gaps = 24/267 (8%) Query: 9 RDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVES 68 H + YD +G TD T + YD + R T + + Sbjct: 555 DGNHQTFTYDGNGNRVTSTD---------PRGATTTFTYDVEGRKTSITDSLGNS----T 601 Query: 69 RYLYDPLGRRVAKRVWRRERDLTGWMSLSRKP------QVTWYGWDGDRLTTIQNDRTRI 122 + YD LG + + R + +K T + +D + D Sbjct: 602 TFTYDVLGNVLTETDPRGNTKTWTYNDRKQKETVTDAFGTTSFTYDPMGRKLTKVDARGK 661 Query: 123 QTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLES 182 + Y L+ G + + + ++ + GED + + + Sbjct: 662 KWSYTYDLVGNLLTESDPLGNTVSYEYDGVRNRIKTTDGEDNVTYYEYDAVGNQTKVIIK 721 Query: 183 EILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGAT 242 D ++E + Q ++ +P+ + ++ D R + ++ G Sbjct: 722 ITDTDPEADEDDIVSTRVFNCIGQRISETNPLD----ETTIFDYDFRNNVITETNSLGEI 777 Query: 243 EWCAEYDEWGNLLNEENPHQLQQLIRL 269 + YDE GN L+ Sbjct: 778 KA-YSYDENGNKLSFTTVTGNVIQYTY 803 Score = 66.4 bits (160), Expect = 2e-09, Method: Composition-based stats. Identities = 55/283 (19%), Positives = 79/283 (27%), Gaps = 60/283 (21%) Query: 8 ARDAHYLYRYDRHGRLTEKTDLIPEGVIRT------------DDERTHRYHYDSQHRLVH 55 AR + YD G L E D + T + T Y YD Sbjct: 449 ARGNTWTNTYDGSGNLIELRDPLSCTTTFTWNSAGQMLTRTDGENNTWTYTYDDAGNQTS 508 Query: 56 YTRTQYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVT-------WYGWD 108 T +S + YD LGR V K +R T + LSR + + +D Sbjct: 509 ITNPDGE----QSTFTYDDLGRMVTKTDFRGNTWTTTYDLLSRVTDIEDPDGNHQTFTYD 564 Query: 109 GDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVV 168 G+ D T + + + G L + L ++ G + Sbjct: 565 GNGNRVTSTDPRGATTTFTYDVEGRKTSITDSLGNSTTFTYDVLGNVLTETD-PRGNTKT 623 Query: 169 FPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDH 228 + DR + E + D S + D Sbjct: 624 WTY-----NDRKQKETVTDAFGTTSFTY------------------------------DP 648 Query: 229 RGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRLPG 271 G L V G +W YD GNLL E +P G Sbjct: 649 MGRKLTKVDARGK-KWSYTYDLVGNLLTESDPLGNTVSYEYDG 690 Score = 63.7 bits (153), Expect = 2e-08, Method: Composition-based stats. Identities = 38/265 (14%), Positives = 77/265 (29%), Gaps = 29/265 (10%) Query: 15 YRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYLYDP 74 Y YD +G T + + +Y YD +RL + Y YD Sbjct: 780 YSYDENGNKLSFTTVTGNVI---------QYTYDKLNRLKTV----GDTSGLFETYEYDA 826 Query: 75 LGRRVAKRVWRRERDLTGWMSLSR-------KPQVTWYGWDGDRLTTIQNDRTRIQTIYQ 127 G + V + ++ + T Y +D +R + T + Sbjct: 827 NGNKTKITVADGAYQTVTYTPFNKPETLTDARGNTTSYVYDEAYNLVKVTNRLGLVTTQE 886 Query: 128 PGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGS-VVFPPVLVQMLDRLESEILA 186 + LI V A + ++ ++ + + + ++ + Sbjct: 887 YDAANRLISVTDPLSHTASLEFDAVGAMVKMTDDKGAETEYIYDDAGRLRVVEYADGSSK 946 Query: 187 DRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKI------HLYHCDHRGLPLALVSTEG 240 + + R + +Q + D V +I + Y D G L + G Sbjct: 947 SVTYDGANRITSKTDQNGTLIQYERDEVGRITARIYPDSSQYDYTYDELGRLLTATNNYG 1006 Query: 241 ATEWCAEYDEWGNLLNEENPHQLQQ 265 YD G +L+ + + Sbjct: 1007 TVT--MTYDAAGRILSADQAGTVTT 1029 Score = 51.0 bits (120), Expect = 9e-05, Method: Composition-based stats. Identities = 42/290 (14%), Positives = 73/290 (25%), Gaps = 40/290 (13%) Query: 12 HYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYL 71 + Y YD L +D + + +Y YD H LV V + Sbjct: 286 QWTYTYDLLDNLVSVSDPLNYSI---------KYTYDENHNLVSVVDKNGNTIWVITYDD 336 Query: 72 YDPL---GRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDR-----------LTTIQ- 116 D GR A + T ++ +G+ LT I Sbjct: 337 DDKCTSYGRPGAIFYYEYFTGYTEKTDPLNNKYTYYFDSNGNVTKSVLPDGTEILTEISA 396 Query: 117 -------NDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVF 169 D +T Y + ++ A G + + + G + Sbjct: 397 NVWPSKITDGNGGETTYTYNGYGQILTETDALGYVTTYTYDPVFQKIATKTDARGNTWTN 456 Query: 170 PPVLVQMLDRL------ESEILADRVSEESRRWLASCGLTVEQMQNQMDP--VYTPARKI 221 L L + + + R + + + P + Sbjct: 457 TYDGSGNLIELRDPLSCTTTFTWNSAGQMLTRTDGENNTWTYTYDDAGNQTSITNPDGEQ 516 Query: 222 HLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRLPG 271 + D G + G T W YD + + E+P Q G Sbjct: 517 STFTYDDLGRMVTKTDFRGNT-WTTTYDLLSRVTDIEDPDGNHQTFTYDG 565 Score = 46.7 bits (109), Expect = 0.002, Method: Composition-based stats. Identities = 47/286 (16%), Positives = 83/286 (29%), Gaps = 35/286 (12%) Query: 12 HYLYRYDRHGRLTEKT-------------DLIPEGVIRTDDERTHRYHYDSQHRLVHYTR 58 + YD +G + T D ++ D R Y YD LV + Sbjct: 243 SLTFTYDANGAMQTATSSASGRSLTFTVNDAGKIATVKDDLNRQWTYTYDLLDNLVSVSD 302 Query: 59 TQYAEPLVESRYLYDPLGRRVA------KRVWRRERDLTGWMSLSRKPQVTWYGWDGDRL 112 +Y YD V+ +W D + +P +Y ++ Sbjct: 303 PLN----YSIKYTYDENHNLVSVVDKNGNTIWVITYDDDDKCTSYGRPGAIFY-YEYFTG 357 Query: 113 TTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPV 172 T + D + Y S + + G T+ + + + G G + Sbjct: 358 YTEKTDPLNNKYTYYFDSNGNVTKSVLPDGTEILTEISANVWPSKITDGNGGETTYTYNG 417 Query: 173 LVQMLDRLE-----SEILADRVSEESRRWLASCGLTVEQMQNQMDPVYT---PARKIHLY 224 Q+L + + D V ++ + G T + + P + Sbjct: 418 YGQILTETDALGYVTTYTYDPVFQKIATKTDARGNTWTNTYDGSGNLIELRDPLSCTTTF 477 Query: 225 HCDHRGLPLALVSTEG-ATEWCAEYDEWGNLLNEENPHQLQQLIRL 269 + G L T+G W YD+ GN + NP Q Sbjct: 478 TWNSAG--QMLTRTDGENNTWTYTYDDAGNQTSITNPDGEQSTFTY 521 Score = 44.0 bits (102), Expect = 0.011, Method: Composition-based stats. Identities = 44/278 (15%), Positives = 74/278 (26%), Gaps = 39/278 (14%) Query: 5 NRIARDAHY-----LYRYDRHGRLTEKTDLIPEGVIRTDD------------ERTHRYHY 47 NR+ Y YD +G T+ T T T Y Y Sbjct: 807 NRLKTVGDTSGLFETYEYDANGNKTKITVADGAYQTVTYTPFNKPETLTDARGNTTSYVY 866 Query: 48 DSQHRLVHYTRTQYAEPLVESRYLYDPLGRRVA-----KRVWRRERDLTGWM--SLSRKP 100 D + LV T E YD R ++ E D G M K Sbjct: 867 DEAYNLVKVTNRLGLVTTQE----YDAANRLISVTDPLSHTASLEFDAVGAMVKMTDDKG 922 Query: 101 QVTWYGW-DGDRLTTIQNDRTRIQTIYQPGSFTPLIR-------VETATGELAKTQRRSL 152 T Y + D RL ++ +++ G+ + ++ E+ + R Sbjct: 923 AETEYIYDDAGRLRVVEYADGSSKSVTYDGANRITSKTDQNGTLIQYERDEVGRITARIY 982 Query: 153 ADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMD 212 D+ Q D + + + +S + + + V ++ Sbjct: 983 PDSSQYDYTYDELGRLLTATNNYGTVTMTYDAAGRILSADQAGTVTTYSSDVISRTRTIN 1042 Query: 213 PVYTPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDE 250 + D GAT +YD Sbjct: 1043 YSSGVSVVEAYTLRDKLESVGY---EGGATIASWDYDS 1077 >UniRef50_B3YAC7 YD repeat protein n=3 Tax=Salmonella enterica RepID=B3YAC7_SALET Length = 1499 Score = 163 bits (413), Expect = 1e-38, Method: Composition-based stats. Identities = 78/365 (21%), Positives = 128/365 (35%), Gaps = 22/365 (6%) Query: 8 ARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVE 67 + Y +D+ GRLT E +T E+ RY YD++ ++ R P E Sbjct: 1055 RPLGEHRYAWDKSGRLT-----GHEVWSKTRSEQETRYRYDNRDQITSVLRLNADGPAQE 1109 Query: 68 SRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDG----DRLTTIQNDRTRIQ 123 RY Y + R+ + + Y +D + T + + Sbjct: 1110 ERYRYTVNEQIAESRINGILSQHDYHNECVTQAGDSRYEYDACGRVIKRTEQKRGFRPQE 1169 Query: 124 TIYQPGSFTPLIRVETATGELAKTQ-----RRSLADTLQQSGGEDGGSVVFPPVLVQMLD 178 Y+ F L V T GE+ + + RR+ + ++ + V + Sbjct: 1170 WRYRWDDFDRLREVRTPDGEVWQYRYDAFGRRTAKRNIIRAAWKQNHHTVSEVRYQWLGM 1229 Query: 179 RLES--EILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALV 236 L + + AD +W G E + + + G P + Sbjct: 1230 ALSASEKRYADGSPALREQWHYRGG--FELLAKEARAANDDTSDFYPILIGPDGAPQEMY 1287 Query: 237 STEGATEWCAEYDEWGNLLNEENP--HQLQQLIRLPGQQYDEESGLYYNRHRYYDPLQGR 294 S G W + WG + + GQ DEESGL+YN HRY D G Sbjct: 1288 SANGRKVWRRQRSLWGQSAANDASPDGRESCDAGFMGQWQDEESGLWYNLHRYMDSRTGH 1347 Query: 295 YITQDPIGLKGGWNFYQYPLNPVQYIDSMGLASKYGHLNNGGYGAR--PNKPPTPDPSKL 352 Y++QDP+ L GG N Y +PV + D +GL + A+ P + P++ Sbjct: 1348 YLSQDPLKLGGGLNTQSYVHDPVGWCDPLGLKCGGVNRRQALNEAKDLAGIPRSQQPNRQ 1407 Query: 353 PDIAK 357 + Sbjct: 1408 WTVGN 1412 Score = 61.4 bits (147), Expect = 8e-08, Method: Composition-based stats. Identities = 57/300 (19%), Positives = 90/300 (30%), Gaps = 36/300 (12%) Query: 3 PDNRIAR-----DAHYLYRYDRHGRLTE-KTDLIPEGVIRTDDERTHRYHYDSQHRLVHY 56 P R+ + L D GR E + D + D T Y Y+S+ LV Sbjct: 616 PGGRVTQIKRDYAGRILSETDADGRKREWQRDAFGQITAYRDHRTTAAYRYNSEGNLV-- 673 Query: 57 TRTQYAEPLVESRYLYD--------PLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWD 108 + + + RY D P G R W + + T Y D Sbjct: 674 -HREVNDQKWQYRYTEDGQIKEVIYPDGSR---EQWAYNAQGSLTAHTDAAGRTTHYAED 729 Query: 109 GD-RLTTIQNDRTR-IQTIYQPGSFTPLIRVET--ATGELAKTQRRSLADTLQQSGGEDG 164 RLT + + R Y+PG P +V A+T R + G G Sbjct: 730 RWLRLTGVTDAEGRSTHWQYRPGESNPHEKVSAVIRADGGAETFRYDGEGKIAVHTGAMG 789 Query: 165 GSVVFPPVLVQMLDRLESEILADRVSEESR--------RWLASCGLTVEQMQNQMDPVYT 216 + + +L +E V + R Q+ Sbjct: 790 QTTRYRHGAFDLLREVEDAGGQRIVCDYDGAARLTQLTRSGNQRWRLYYDAAGQLAGEDD 849 Query: 217 PARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQYDE 276 + + +Y D +G V +G+ W DE+G + +Q +R YD Sbjct: 850 WSGRRTVYRRDEQGRLAEKVRPDGS-VWRYARDEFGRVTTITGE---RQQLRYGWDLYDR 905 Score = 52.5 bits (124), Expect = 3e-05, Method: Composition-based stats. Identities = 48/288 (16%), Positives = 79/288 (27%), Gaps = 60/288 (20%) Query: 8 ARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQY------ 61 YRYD GRLT +T D T R YD+ L Y + Sbjct: 943 QDGQRTEYRYDEAGRLT---------GTKTADGETQR-EYDASGALTAYRSNDHRMEFGH 992 Query: 62 --AEPLVESRYL-----------------------YDPLGRRVAKRVWRRERDLTGWMSL 96 A RY +D GR +R + Sbjct: 993 TRAGQERSRRYRPEDEESWLEQTPLNHAVYIQEQGHDACGRTAWQRAGAERLTGSHESVA 1052 Query: 97 SRKP-QVTWYGWD-GDRLTTIQ---NDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRS 151 S +P Y WD RLT + R+ +T Y+ + + V + + R Sbjct: 1053 SWRPLGEHRYAWDKSGRLTGHEVWSKTRSEQETRYRYDNRDQITSVLRLNADGPAQEERY 1112 Query: 152 LADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQM 211 +Q ++ + + +CG +++ + + Sbjct: 1113 RYTVNEQIAESRINGILSQHDYHNECVTQAGDSRYE---------YDACGRVIKRTEQKR 1163 Query: 212 DPVYTPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEEN 259 R Y D + + +G W YD +G + N Sbjct: 1164 GFRPQEWR----YRWDDFDRLREVRTPDGE-VWQYRYDAFGRRTAKRN 1206 Score = 48.3 bits (113), Expect = 7e-04, Method: Composition-based stats. Identities = 37/291 (12%), Positives = 73/291 (25%), Gaps = 67/291 (23%) Query: 5 NRIARDAHYL----YRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQ 60 +I + YRY+ G L R +++ +Y Y ++ Sbjct: 650 GQITAYRDHRTTAAYRYNSEGNLV----------HREVNDQKWQYRYTEDGQIKEVIYPD 699 Query: 61 YAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVT----------------- 103 + ++ Y+ G A R VT Sbjct: 700 GS----REQWAYNAQGSLTAHTDAAGRTTHYAEDRWLRLTGVTDAEGRSTHWQYRPGESN 755 Query: 104 ----------------WYGWDGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKT 147 + +DG+ + T Y+ G+F L VE A G+ Sbjct: 756 PHEKVSAVIRADGGAETFRYDGEGKIAVHTGAMGQTTRYRHGAFDLLREVEDAGGQRIVC 815 Query: 148 QRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQM 207 A Q + + ++ Q+ + W + Sbjct: 816 DYDGAARLTQLTRSGNQRWRLYYDAAGQLAGEDD--------------WSGRRTVYRRDE 861 Query: 208 QNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEE 258 Q ++ P + Y D G + +D + +++ E Sbjct: 862 QGRLAEKVRPDGSVWRYARDEFGRVTTITGERQQL--RYGWDLYDRMVSAE 910 Score = 43.3 bits (100), Expect = 0.022, Method: Composition-based stats. Identities = 40/309 (12%), Positives = 67/309 (21%), Gaps = 57/309 (18%) Query: 11 AHYLYRYDRHGRLTEKTDLIPEGVIRTD----------------------DERTHRYHYD 48 Y +D + R+ + D D + Y YD Sbjct: 894 QQLRYGWDLYDRMVSAEVYECNDATQKDYTLTSRITLEWDDRHRLVAEEQDGQRTEYRYD 953 Query: 49 SQHRLVHYTRTQYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWD 108 RL E++ YD G A R + + + + Y + Sbjct: 954 EAGRLTGTKTADG-----ETQREYDASGALTAYRSNDHRMEFGHTRAGQERSR--RYRPE 1006 Query: 109 GDRLTTIQNDRTRIQTIYQPGSFT------PLIRVETATGELAKTQRRSLADTLQQSGGE 162 + Q I + G E TG + + + Sbjct: 1007 DEESWLEQTPLNHAVYIQEQGHDACGRTAWQRAGAERLTGSHESVASWRPLGEHRYAWDK 1066 Query: 163 DGGSVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKI- 221 G ++ +R S L + G E+ +I Sbjct: 1067 SGRLTGHEVWSKTRSEQETRYRYDNRDQITSVLRLNADGPAQEERYRYTVNEQIAESRIN 1126 Query: 222 -----HLYHCD---HRGLPLALVSTEGATE-------------WCAEYDEWGNLLNEENP 260 H YH + G G W +D++ L P Sbjct: 1127 GILSQHDYHNECVTQAGDSRYEYDACGRVIKRTEQKRGFRPQEWRYRWDDFDRLREVRTP 1186 Query: 261 HQLQQLIRL 269 R Sbjct: 1187 DGEVWQYRY 1195 >UniRef50_B3X3P2 RhsH n=1 Tax=Shigella dysenteriae 1012 RepID=B3X3P2_SHIDY Length = 263 Score = 163 bits (413), Expect = 1e-38, Method: Composition-based stats. Identities = 92/129 (71%), Positives = 100/129 (77%), Gaps = 1/129 (0%) Query: 214 VYTPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQ 273 Y R IHLYHCD+RGLPL L+S +GATEWCAEYDEWGNLLNEENP LQQLIRLPGQQ Sbjct: 4 AYRSLRIIHLYHCDYRGLPLTLISPDGATEWCAEYDEWGNLLNEENPQHLQQLIRLPGQQ 63 Query: 274 YDEESGLYYNRHRYYDPLQGRYITQDPIGLKGGWNFYQYPL-NPVQYIDSMGLASKYGHL 332 YDEESGLYYNRHRYYDPLQGRYITQDPIGL+GGWN Y Y +P ID +GL K + Sbjct: 64 YDEESGLYYNRHRYYDPLQGRYITQDPIGLEGGWNQYVYASIHPTYSIDPLGLIDKPAPV 123 Query: 333 NNGGYGARP 341 N + P Sbjct: 124 FNRELNSDP 132 >UniRef50_Q4ZU10 YD repeat n=2 Tax=Pseudomonas syringae group RepID=Q4ZU10_PSEU2 Length = 913 Score = 163 bits (412), Expect = 1e-38, Method: Composition-based stats. Identities = 83/343 (24%), Positives = 127/343 (37%), Gaps = 42/343 (12%) Query: 6 RIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPL 65 ++ YRYD ++E + V +Y YD+ RL TQ Sbjct: 468 QVGNWQT-TYRYDADSNISETATSLWGAV---------QYEYDALGRL-----TQEQTNS 512 Query: 66 VESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTI---------Q 116 V+ Y +D G R + S + + Q Y D +R+T+I Sbjct: 513 VKKAYSFDATGNR------TQRTTTNLTTSDATETQSLTYASDSNRVTSINGSTLPVDAA 566 Query: 117 NDRTRIQ-TIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQ 175 + T+I + S L V A + + GS Sbjct: 567 GNHTQINGRRFTYDSQGRLSEVYQANIYKIADYKYNALGQRIIKRAYVMGSQALAGTTTY 626 Query: 176 MLD---RLESEILADRVSEESRR--WLASCGLTVEQMQNQMDPVY-TPARKIHLYHCDHR 229 + D +L + L D +++ W + + Q+ + + K+ H DH Sbjct: 627 LYDPSGKLIGQTLYDGNGQKTSGQYWFWLDNMPLAQLTANFSTLGEVSSSKLIYLHVDHL 686 Query: 230 GLPLALVSTEGATEWCAEYDEWGNLLNEENPH----QLQQLIRLPGQQYDEESGLYYNRH 285 P + A W D +G EE+ +R PGQ YD ++ L YN + Sbjct: 687 NTPRLATDSSQALLWRWNSDAYGVGSPEEDVDGDGKATTIALRFPGQIYDAQTQLSYNYY 746 Query: 286 RYYDPLQGRYITQDPIGLKGGWNFYQYPL-NPVQYIDSMGLAS 327 R Y+P GRY+ DPIGL GG N Y Y NP+ +ID MGLA+ Sbjct: 747 RDYNPDTGRYVQSDPIGLGGGLNTYAYVNANPMSFIDPMGLAA 789 Score = 46.7 bits (109), Expect = 0.002, Method: Composition-based stats. Identities = 46/258 (17%), Positives = 80/258 (31%), Gaps = 34/258 (13%) Query: 36 RTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYLY-------DPLGRRVAKRVWRRER 88 RTD +Y YD+Q L T + S Y DP G + Sbjct: 44 RTDVNDVTQYAYDAQGNLTTVTNALGQVYALASFDSYGNPQSITDPNG-----VMTTLSY 98 Query: 89 DLTGWM-SLSRKPQVTWYGWD--GDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELA 145 GW+ SL+ T Y ++ GD L D ++ Y LI V GE Sbjct: 99 TPQGWLASLTIDSSTTQYAYNEVGDLLQVTTADGNWVKYSYDDA--RRLIGVRNRLGESI 156 Query: 146 KTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVE 205 + + + + G+VV + ++ D L I ++++R+ Sbjct: 157 NYTLDPMGNRTAERTKDANGAVVH--LQRRVFDELGRLIRVVGAGDQTQRYGYDLNDNQS 214 Query: 206 Q--------------MQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEW 251 N++ + P + + + +V G YD Sbjct: 215 SDTTPRNNKTQQAFDALNRVSKIVDPLQGVTALGYNSDDKVTKVVDPRG-VTTLYTYDSL 273 Query: 252 GNLLNEENPHQLQQLIRL 269 GN ++ ++P Sbjct: 274 GNRISSKSPDGGTSTYAY 291 Score = 45.2 bits (105), Expect = 0.006, Method: Composition-based stats. Identities = 47/301 (15%), Positives = 86/301 (28%), Gaps = 45/301 (14%) Query: 10 DAHYLYRYDRHGRLTE-------KTDLIPEGVIRTDD-----ERTHRYHYDSQHRLVHYT 57 D Y YD + + KT + + R + Y+S ++ Sbjct: 200 DQTQRYGYDLNDNQSSDTTPRNNKTQQAFDALNRVSKIVDPLQGVTALGYNSDDKVTKVV 259 Query: 58 RTQYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSR-------KPQVTWYGWDG- 109 + L Y YD LG R++ + + + + VT Y +D Sbjct: 260 DPRGVTTL----YTYDSLGNRISSKSPDGGTSTYAYDEANNLIRSTDARGVVTEYAYDAL 315 Query: 110 DRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVV- 168 +RLT+ T I F + G T + A L + G V Sbjct: 316 NRLTSKSYPATPALNI----KFLYDQTADGNLGIGHLTGLQDSAGVLTYTYDAKGNLVRQ 371 Query: 169 FPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDH 228 V V D E+ + + + + +N V Sbjct: 372 HRSVGVNSGDYYETLNYGYDAARNLVQIGYPSNINLTFTRNSAAQVT------------- 418 Query: 229 RGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRL--PGQQYDEESGLYYNRHR 286 G+ LA+ + Y +G + + + + Q ++ G + +R Sbjct: 419 -GVKLAIGNKTATLASNISYQPFGPVNSLTWGNGILLSRTYDQDYQLTQQQVGNWQTTYR 477 Query: 287 Y 287 Y Sbjct: 478 Y 478 Score = 42.5 bits (98), Expect = 0.038, Method: Composition-based stats. Identities = 49/303 (16%), Positives = 82/303 (27%), Gaps = 41/303 (13%) Query: 6 RIARDAHYLYRYDRHGRLTEKTDLIPE-------------GVIRTDDERTHRYHYDSQHR 52 R + Y YD G LT T+ + + I + Y Q Sbjct: 44 RTDVNDVTQYAYDAQGNLTTVTNALGQVYALASFDSYGNPQSITDPNGVMTTLSYTPQGW 103 Query: 53 LVHYTRTQYAEPLVESRYLYDPLGRRVA---------KRVWRRERDLTGWMSLSRKPQVT 103 L T ++Y Y+ +G + K + R L G + + Sbjct: 104 LASLTID-----SSTTQYAYNEVGDLLQVTTADGNWVKYSYDDARRLIGVRNRLGESINY 158 Query: 104 WYGWDGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGED 163 G+R D Q F L R+ G +TQR QS Sbjct: 159 TLDPMGNRTAERTKDANGAVVHLQRRVFDELGRLIRVVGAGDQTQRYGYDLNDNQSSDTT 218 Query: 164 GGSVVFPPVLVQM------LDRLES-EILADRVSEESRRWLASCGLTVEQMQNQMDPVY- 215 + + +D L+ L ++ + + G+T + + Sbjct: 219 PRNNKTQQAFDALNRVSKIVDPLQGVTALGYNSDDKVTKVVDPRGVTTLYTYDSLGNRIS 278 Query: 216 --TPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQ 273 +P Y D + G YD L ++ P I+ Sbjct: 279 SKSPDGGTSTYAYDEANNLIRSTDARG-VVTEYAYDALNRLTSKSYPATPALNIKF---L 334 Query: 274 YDE 276 YD+ Sbjct: 335 YDQ 337 >UniRef50_B4SR21 YD repeat protein n=2 Tax=Stenotrophomonas maltophilia RepID=B4SR21_STRM5 Length = 738 Score = 163 bits (411), Expect = 2e-38, Method: Composition-based stats. Identities = 77/323 (23%), Positives = 116/323 (35%), Gaps = 23/323 (7%) Query: 15 YRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYLYDP 74 Y +D+ GRLT + P G + Y Y + + +P + YD Sbjct: 286 YNHDQEGRLTAMSVWGPNGSKVSY----WDYQYSADGEITAIV--DAVDPNMTQLIGYDA 339 Query: 75 LGRRVAKRVWRRERDLT-----GWMSLSRKPQVTWYGWD--GDRLTTIQNDRTRIQTIYQ 127 L R + +L+ Q+T Y D +R+ N Q Y Sbjct: 340 LSRMTKLTRFGVINNLSYDAGGNHDRYQAGNQLTQYSIDPGSNRVLNYTNQDGSRQYQYD 399 Query: 128 PGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILAD 187 R+ G T + + +S + Q + ++ I + Sbjct: 400 ALGN----RISETAGSRISTYEYDAFNRMSRSNIGGTATDYVLNAQGQRVAKVNKNINSR 455 Query: 188 R--VSEESRRWLASCGLTVEQMQNQMDPVY-TPARKIHLYHCDHRGLPLALVSTEGATEW 244 + + G+ + + V + + + H DH G P + S T W Sbjct: 456 YFYAGQNQLMTELNNGVWTNYFWFEGELVGLARSGQHNYVHTDHLGRPEFVTSPSQQTVW 515 Query: 245 CAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEESGLYYNRHRYYDPLQGRYITQDPIGLK 304 A +G + ++ L I PGQ YD ESGL+YN R YD GRY+ DPIGL Sbjct: 516 KAYNYAYGRSVQKDEIGGL--NIGFPGQYYDVESGLWYNGFRDYDASIGRYVQSDPIGLA 573 Query: 305 GGWNFYQYP-LNPVQYIDSMGLA 326 GG N Y Y NPV D +GL Sbjct: 574 GGLNTYAYAEGNPVTGFDPLGLC 596 Score = 64.1 bits (154), Expect = 1e-08, Method: Composition-based stats. Identities = 49/299 (16%), Positives = 82/299 (27%), Gaps = 56/299 (18%) Query: 6 RIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDER------------THRYHYDSQHRL 53 R + Y YD GR+T+ TD + D R T + YD R Sbjct: 32 RGNGVQNVRYAYDAEGRVTQVTDSQNRVTRMSYDPRGRLIKSIDAVGGTTQIAYDLADRP 91 Query: 54 VHYTRT-----------------QYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSL 96 V + Q + +++ YD G R + G+ L Sbjct: 92 VRVSDPRNLVTTYEFDGFGQMWKQVSPDTGTTQHQYDAAGLRTSTTRADGSVVSFGYDGL 151 Query: 97 SR--------KPQVTWYGWDGD---RLTTIQNDRTRIQTIYQPGSFTPLIR----VETAT 141 R + Y W G+ ++ T Y P + R + Sbjct: 152 GRMTSASAEGRTMGYSYDWCGNGKGQMCGTSGPGTATHFAYTPNGQLQIRRDFTDLSGQK 211 Query: 142 GELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSEESRRWLASCG 201 + + T + L Q +G + + + L V R ++ Sbjct: 212 TDYSTTYGYDGINRLSQIIYPNGDKATYTY-----GSQGKPSALTATVDGTQRSIISQAN 266 Query: 202 LTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALV--STEGATE--WCAEYDEWGNLLN 256 V + AR Y+ D G A+ G+ W +Y G + Sbjct: 267 WKVTGAHEWLAYGNGLARG---YNHDQEGRLTAMSVWGPNGSKVSYWDYQYSADGEITA 322 Score = 56.3 bits (134), Expect = 3e-06, Method: Composition-based stats. Identities = 40/262 (15%), Positives = 71/262 (27%), Gaps = 30/262 (11%) Query: 14 LYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYLYD 73 Y YD GR+ V R + + RY YD++ R+ T +Q +R YD Sbjct: 19 TYEYDELGRVI---------VERGNGVQNVRYAYDAEGRVTQVTDSQN----RVTRMSYD 65 Query: 74 PLGRRVAKRVWRRERDLTGWMSLSR-------KPQVTWYGWDGDRLT--TIQNDRTRIQT 124 P GR + + R + VT Y +DG + D Q Sbjct: 66 PRGRLIKSIDAVGGTTQIAYDLADRPVRVSDPRNLVTTYEFDGFGQMWKQVSPDTGTTQH 125 Query: 125 IYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEI 184 Y R T + + S +G ++ + + ++ Sbjct: 126 QYDAAGL----RTSTTRADGSVVSFGYDGLGRMTSASAEGRTMGYSY---DWCGNGKGQM 178 Query: 185 LADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEW 244 + + + ++ ++ D Y D ++ G Sbjct: 179 CGTSGPGTATHFAYTPNGQLQIRRDFTDLSGQKTDYSTTYGYDGINRLSQIIYPNGDKA- 237 Query: 245 CAEYDEWGNLLNEENPHQLQQL 266 Y G Q Sbjct: 238 TYTYGSQGKPSALTATVDGTQR 259 Score = 48.6 bits (114), Expect = 5e-04, Method: Composition-based stats. Identities = 30/189 (15%), Positives = 54/189 (28%), Gaps = 22/189 (11%) Query: 5 NRIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEP 64 N +D Y+YD G +T R Y YD+ +R+ Sbjct: 386 NYTNQDGSRQYQYDALGNRISETA----------GSRISTYEYDAFNRMSRSNI-----G 430 Query: 65 LVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQV-----TWYGWDGDRLTTIQNDR 119 + Y+ + G+RVAK ++ T Y W L + Sbjct: 431 GTATDYVLNAQGQRVAKVNKNINSRYFYAGQNQLMTELNNGVWTNYFWFEGELVGLARSG 490 Query: 120 TRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDR 179 ++ P + + K + ++Q+ G ++ FP + Sbjct: 491 QH-NYVHTDHLGRPEFVTSPSQQTVWKAYNYAYGRSVQK-DEIGGLNIGFPGQYYDVESG 548 Query: 180 LESEILADR 188 L D Sbjct: 549 LWYNGFRDY 557 >UniRef50_A3DF74 YD repeat protein n=17 Tax=Clostridium thermocellum RepID=A3DF74_CLOTH Length = 1959 Score = 163 bits (411), Expect = 2e-38, Method: Composition-based stats. Identities = 70/355 (19%), Positives = 128/355 (36%), Gaps = 48/355 (13%) Query: 14 LYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYLYD 73 Y YD +G +K + + R Y YDS +RL + + ++ ++ YD Sbjct: 1382 KYFYDTNGSQIKKEE----------NGRVTLYGYDSVNRLEKVSYPEG----IDEKFAYD 1427 Query: 74 PLGRRVAKRVWRRERDLTGWMSLSRKPQ------VTWYGWD-GDRLTTIQNDRTRIQTIY 126 G R+A R + + + + +R Q VT Y +D G L + + + Sbjct: 1428 NAGNRIA-REFGKLLENYKYDKSNRLIQKVSNGIVTDYEYDAGGNLVKEIEGESVRR--F 1484 Query: 127 QPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILA 186 + F L++V G + + +Q + +F Sbjct: 1485 EYDDFKRLVKVINPDGTYMENIYDAEGMRVQTVENGEYRRFIFDG--------------N 1530 Query: 187 DRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWCA 246 + ++E W +++ + Y + G L + G Sbjct: 1531 NAIAEVGEDWSLKGRNVRGHALLELEDE---NNNTYHYLHNAHGDVANLADSSGKIVNTY 1587 Query: 247 EYDEWGNLLNEENPHQLQQLIRLPGQQYDEESGLYYNRHRYYDPLQGRYITQDP----IG 302 +YD +GN L+ + + R G+QYD+ +G YY R R+Y P GR+ +D Sbjct: 1588 DYDAFGNTLSVK--ETIHNRFRYAGEQYDDFTGQYYLRARFYSPSLGRFTQEDTWRGFTY 1645 Query: 303 LKGGWNFYQYP-LNPVQYIDSMGLASKYGHLNNGGYGARPNKPPTPDPSKLPDIA 356 N Y Y NPV ++D G K+ G + N+ +++ D+ Sbjct: 1646 NPASLNLYTYVENNPVMFVDPTGHWPKFIDNALDWVGNKVNEAADWVGNRVNDVV 1700 Score = 64.8 bits (156), Expect = 6e-09, Method: Composition-based stats. Identities = 58/333 (17%), Positives = 105/333 (31%), Gaps = 46/333 (13%) Query: 8 ARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVE 67 Y+YD++GR+ E +D I V +Y YD + + Sbjct: 829 KTWNIISYKYDKNGRIIEVSDSIGSCV---------QYEYDCLGKKTLEKKKINDNTYKI 879 Query: 68 SRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWD--GDRLTTIQNDRTRIQTI 125 +R+ Y G R+ K + + T + +D G+ I + R + I Sbjct: 880 TRFEYSSAG-RLKKVIEEYDGKDLAGEEKGTVKAETLFEYDRNGNITAVISPEGYRKRFI 938 Query: 126 YQPGS-------FTPLIRVETATGELAK---TQRRSLADTLQQSGGEDGGSVVFPPVLVQ 175 Y + + P V+ + + T R + ++G + + Sbjct: 939 YDAANRRIGVEEYLPPEGVKISGNAVNALLKTIVRKTLYSYDKAGNLVQQRLPNGRTVET 998 Query: 176 MLDRLESEIL-ADRVSEESRRWLASCGLTVEQMQ-NQMDPVYTPARKIHLYHCDHRGLPL 233 D + I D +R + + G ++ ++ DP ++ D L Sbjct: 999 EYDEMNRRIRIKDAEGNITRLFYDASGNLIKYVEPENYDPKIDDGPGTSYFY-DSMNRLL 1057 Query: 234 ALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEESGLYYNRHRY-----Y 288 + + G Y+ G ++ + + D + RY Y Sbjct: 1058 QVTNAAGIVVERNIYNTAGEIIKKIDARGYLAAAN------DND--------RYGVEYGY 1103 Query: 289 DPLQG-RYITQDPIGLKGGWNFYQYPLNPVQYI 320 DP RYIT P G QY N + YI Sbjct: 1104 DPGGRLRYITT-PEAKAKGIVSQQYNYNSLGYI 1135 Score = 56.3 bits (134), Expect = 3e-06, Method: Composition-based stats. Identities = 42/293 (14%), Positives = 85/293 (29%), Gaps = 52/293 (17%) Query: 14 LYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVES----- 68 + YD G L ++ I ++ Y YD R++ T + E Sbjct: 482 RFEYDEKGNLLKRIVK-----INSNTNSETVYTYDEFGRVLTITDAENNTTSFEYNDDDI 536 Query: 69 ------------RYLYD--PLGRRVA--------KRVWRRERDLTGWMSLSRKPQVTWYG 106 R+ YD +GR VA K + +TG + Y Sbjct: 537 NKPSAIIDPEGNRFTYDFDAIGRVVAITTGYGTVKIEYNERDKITGLIDAENNKIRIKYD 596 Query: 107 WDGDRLTTI------QNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQ-- 158 G+ + I Q + + +I+ G + + + +++ Sbjct: 597 AVGNMVEVIAPEQYAQKGDKAQSYTFAYDAMDRMIKQIDPLGNVFMVKYDEHGNKIKEVN 656 Query: 159 -----SGGEDGGSVVFPPVLVQM-LDRLESEILADRVSEESRRWLASCGLTVEQMQNQMD 212 +DG +V+ ++ + + R+ + + + L + + D Sbjct: 657 PNYYNEEEDDGIGMVYKYDSSHRQINTIFPDGSKSRIKYDPQGNIIKTILPGDYNEETDD 716 Query: 213 PVYTPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQ 265 P + D ++ G YDE G ++ E N Sbjct: 717 G---PGMQFTYDEMDRL---DKIIDPNGNVIAKYLYDEDGRVIKEINAKGYSS 763 Score = 56.0 bits (133), Expect = 3e-06, Method: Composition-based stats. Identities = 54/313 (17%), Positives = 92/313 (29%), Gaps = 57/313 (18%) Query: 3 PDNRIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVH------- 55 DN R LY+Y+ G L EK + + T YD RLV Sbjct: 764 ADNDEERWGT-LYKYNLAGWLVEKRTPLESINGQIFYNVTEN-VYDRNGRLVQQKISPEY 821 Query: 56 YTRTQYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKP-----------QVTW 104 T+T Y + Y YD GR + + L +K ++T Sbjct: 822 VTKTGYPKTWNIISYKYDKNGRIIEVSDSIGSCVQYEYDCLGKKTLEKKKINDNTYKITR 881 Query: 105 Y-------------GWDGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRS 151 + +DG L + + +T+++ + V + G + + Sbjct: 882 FEYSSAGRLKKVIEEYDGKDLAGEEKGTVKAETLFEYDRNGNITAVISPEGYRKRFIYDA 941 Query: 152 LADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQM 211 + G PP V++ + +L V + + + L +++ N Sbjct: 942 ANRRI-------GVEEYLPPEGVKISGNAVNALLKTIVRKTLYSYDKAGNLVQQRLPNGR 994 Query: 212 DPVYTPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRLPG 271 D + + EG YD GNL+ P I Sbjct: 995 TVETE---------YDEMNRRIRIKDAEGNIT-RLFYDASGNLIKYVEPENYDPKI---- 1040 Query: 272 QQYDEESGLYYNR 284 D+ G Y Sbjct: 1041 ---DDGPGTSYFY 1050 Score = 54.4 bits (129), Expect = 8e-06, Method: Composition-based stats. Identities = 40/281 (14%), Positives = 73/281 (25%), Gaps = 25/281 (8%) Query: 8 ARDAHYLYRYDRHGRLTEKTDLIP--------------EGVIRTDDERTHRYHYDSQHRL 53 ++YD G L + P I T R+ YD + L Sbjct: 432 RNGRTRRFKYDERGNLIAEIMPEPFNYTVRYSYDGNNRRTKISTPAGGLARFEYDEKGNL 491 Query: 54 VHYTRTQYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLT 113 + + E+ Y YD GR + + +G+R T Sbjct: 492 LKRIVKINSNTNSETVYTYDEFGRVLTITDAENNTTSFEYNDDDINKPSAIIDPEGNRFT 551 Query: 114 TIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVL 173 + R+ I G T I + ++ + V+ P Sbjct: 552 YDFDAIGRVVAITT-GYGTVKIEYNERDKITGLIDAENNKIRIKYDAVGNMVEVIAPEQY 610 Query: 174 VQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHL--YHCDHRGL 231 Q D+ +S A + + + G ++ + D G+ Sbjct: 611 AQKGDKAQSYTFAYDAMDRMIKQIDPLGNVFMVKYDEHGNKIKEVNPNYYNEEEDDGIGM 670 Query: 232 PLALVSTEGAT--------EWCAEYDEWGNLLNEENPHQLQ 264 S+ + +YD GN++ P Sbjct: 671 VYKYDSSHRQINTIFPDGSKSRIKYDPQGNIIKTILPGDYN 711 Score = 54.0 bits (128), Expect = 1e-05, Method: Composition-based stats. Identities = 45/266 (16%), Positives = 83/266 (31%), Gaps = 38/266 (14%) Query: 9 RDAHYLYRYDRHGRLTEKTDLIPEG--------------------VIRTDDERTHRYHYD 48 + Y + YD R+ ++ D + DD Y YD Sbjct: 616 KAQSYTFAYDAMDRMIKQIDPLGNVFMVKYDEHGNKIKEVNPNYYNEEEDDGIGMVYKYD 675 Query: 49 SQHRLVHYTRTQYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWD 108 S HR ++ + +SR YDP G + K + + + + + +D Sbjct: 676 SSHRQINTIFPDGS----KSRIKYDPQGN-IIKTILPGDYNEETDDGPGMQ-----FTYD 725 Query: 109 G-DRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSV 167 DRL I + + Y +I+ A G + TL + G + Sbjct: 726 EMDRLDKIIDPNGNVIAKYLYDEDGRVIKEINAKGYSSADNDEERWGTLYKY--NLAGWL 783 Query: 168 VFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCD 227 V ++ ++ + + V + + R + + Y I Y D Sbjct: 784 VEKRTPLESINGQIFYNVTENVYDRNGRLVQQKISPEYVTKTG----YPKTWNIISYKYD 839 Query: 228 HRGLPLALVSTEGATEWCAEYDEWGN 253 G + + + G+ EYD G Sbjct: 840 KNGRIIEVSDSIGSCV-QYEYDCLGK 864 Score = 54.0 bits (128), Expect = 1e-05, Method: Composition-based stats. Identities = 42/268 (15%), Positives = 72/268 (26%), Gaps = 56/268 (20%) Query: 13 YLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYLY 72 + Y YD G LT D + RY+Y+S + L Y Y Sbjct: 1167 FRYEYDYAGNLTAVID---------GNGNVTRYNYNSLNILSEIIDPLGG----RISYKY 1213 Query: 73 DPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQPGSFT 132 D GR V W DR + + Y+ Sbjct: 1214 DRQGRMV---------------------------WTSDREGRVTH--------YRYNFDD 1238 Query: 133 PLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSEE 192 L+ + + G K + S + P + D ++ Sbjct: 1239 KLVSIWSENGIFEKYEYNLDGSLAASISDRTIHSYTYTPSGRLKKKNTNGVTVLDCEYDK 1298 Query: 193 SRR---WLASCGLTVEQMQN---QMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWCA 246 S R G T+E + ++ V RK Y + ++ G Sbjct: 1299 SGRVTKLTDVSGKTIEYTYDILGRLTNVINEGRKTAQYEYNPDNTISRILYGSG-VFAKY 1357 Query: 247 EYDEWGNLLNEENPHQLQQLIRLPGQQY 274 +YD ++ N + + G+ + Sbjct: 1358 DYDMDKKIIGILNVDPFGREL-FNGKYF 1384 Score = 50.6 bits (119), Expect = 1e-04, Method: Composition-based stats. Identities = 38/297 (12%), Positives = 78/297 (26%), Gaps = 41/297 (13%) Query: 7 IARDAHYLYRYDRHGRLTEKTDLIPEGV------------IRTDDERTHRYHYDSQHRLV 54 + YRYD+ G LT +DL + + + + + Y+ Sbjct: 242 LKLHDGTTYRYDKSGNLTSISDLNGNAISIKYNGQGMISSVISPGGKFLDFSYEDL---- 297 Query: 55 HYTRTQYAEPLVESRYLYDPLGRRVA---------KRVWRRERDLTGWMSLSRKPQVTWY 105 R E Y YD G + K + + ++ Y Sbjct: 298 -KLRKITDHTGREIIYSYDKSGNLIQVKYPDGGIIKYGYDNKGMISITDQNGNTYVQNTY 356 Query: 106 GWDGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGG 165 G + + ++ + Y PG + + + + + + + L + +DG Sbjct: 357 DEAGRVVKQLDHEGNELVIEYCPGECKNIFKWQK--SGITRIYKYNEEKLLTEIIYDDGT 414 Query: 166 SVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYH 225 V+ + + + R + R + E + Y + Sbjct: 415 KEVYTYDEDKNRNSITDRNGRTRRFKYDERGNLIAEIMPEPFNYTVRYSYDGNNRRTKIS 474 Query: 226 CDHRGLPLALVSTEGATEWC-------------AEYDEWGNLLNEENPHQLQQLIRL 269 GL +G YDE+G +L + Sbjct: 475 TPAGGLARFEYDEKGNLLKRIVKINSNTNSETVYTYDEFGRVLTITDAENNTTSFEY 531 Score = 47.5 bits (111), Expect = 0.001, Method: Composition-based stats. Identities = 54/320 (16%), Positives = 92/320 (28%), Gaps = 69/320 (21%) Query: 11 AHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVE--- 67 Y+YDR GR+ +D + R Y Y+ +LV E Sbjct: 1207 GRISYKYDRQGRMVWTSDR---------EGRVTHYRYNFDDKLVSIWSENGIFEKYEYNL 1257 Query: 68 -------------SRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVT-------WYGW 107 Y Y P GR K + R ++T Y + Sbjct: 1258 DGSLAASISDRTIHSYTYTPSGRLKKKNTNGVTVLDCEYDKSGRVTKLTDVSGKTIEYTY 1317 Query: 108 D-GDRLTTIQNDRTRI-QTIYQPGS--------------FTP--------LIRVETATGE 143 D RLT + N+ + Q Y P + + ++ V+ E Sbjct: 1318 DILGRLTNVINEGRKTAQYEYNPDNTISRILYGSGVFAKYDYDMDKKIIGILNVDPFGRE 1377 Query: 144 LAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDR------LESEILADRVSEESRRWL 197 L + + Q E+G ++ V L++ ++ + D R Sbjct: 1378 LFNGKYFYDTNGSQIKKEENGRVTLYGYDSVNRLEKVSYPEGIDEKFAYDNAGNRIAREF 1437 Query: 198 ASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNE 257 + ++ + Y D G + + EG + EYD++ L+ Sbjct: 1438 GKLLENYKYDKSNRLIQKVSNGIVTDYEYDAGGNLVKEI--EGESVRRFEYDDFKRLVKV 1495 Query: 258 ENPHQLQQLIRLPGQQYDEE 277 NP YD E Sbjct: 1496 INPDGT-----YMENIYDAE 1510 >UniRef50_A9BX63 YD repeat protein n=2 Tax=cellular organisms RepID=A9BX63_DELAS Length = 1390 Score = 163 bits (411), Expect = 2e-38, Method: Composition-based stats. Identities = 73/317 (23%), Positives = 116/317 (36%), Gaps = 14/317 (4%) Query: 15 YRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLV--ESRYLY 72 Y+YD +T KT + V + D Y YD+ RL + L + +Y Y Sbjct: 955 YQYDVESSITRKTLQLGSDVNGSVD-----YAYDALDRLTQVRPSTSLTELGLPQEQYGY 1009 Query: 73 DPLGRRVAKRVWRRERDLTGWMSLSRKP---QVTWYGWDGDRLTTIQNDRTRIQTIYQPG 129 D + R + E L ++ Y + I T Sbjct: 1010 DAVHNRTSSLHQPGEWQYASGNRLVQRGLGADQVRYDYSATGHIQSATRNGSITTNLYDA 1069 Query: 130 SFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRV 189 + + VE A+ Q + ++ G G+ + E E L + Sbjct: 1070 AERRVA-VEQDGQVTARYQYDPFGRRISKTLGTGQGAQTTWFIYSGEGLLAEVEALGKTI 1128 Query: 190 SEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLY-HCDHRGLPLALVSTEGATEWCAEY 248 + A G + ++ + +I+ Y H DH P G + W A Sbjct: 1129 KSYGWQPDADWGTEPLWQADHINGQTGTSTRIYHYLHSDHLSTPQVASDAAGRSSWQALN 1188 Query: 249 DEWGNLLNEENPHQLQQLIRLPGQQYDEESGLYYNRHRYYDPLQGRYITQDPIGLKGGWN 308 + +G L ++ + +R GQ +DEE+G +YN R Y P GRY+ DPIG+ GG N Sbjct: 1189 ESFGQTLERSG-NRTRMNLRFAGQYFDEETGTHYNYQRDYSPGVGRYLQTDPIGIDGGVN 1247 Query: 309 FYQYP-LNPVQYIDSMG 324 + Y NPV+ D G Sbjct: 1248 VFVYAEENPVKLNDPTG 1264 Score = 52.5 bits (124), Expect = 4e-05, Method: Composition-based stats. Identities = 42/308 (13%), Positives = 79/308 (25%), Gaps = 62/308 (20%) Query: 8 ARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVE 67 A+ + Y YD +G TD + Y + ++ T Sbjct: 474 AQASVTTYAYDGNGNRKTATDA---------EGGVWSYTHTVTGQIASITNPLGH----T 520 Query: 68 SRYLYDPLGRRVAKRVW--------RRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDR 119 +R+ YD G R+ K ++ R + S+ + T +D + Sbjct: 521 TRHEYDSHGNRI-KTIYPSGLTSSARFDALGNETQSMDGEGHATVATYDSQSRLVTATNA 579 Query: 120 TRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFP--------- 170 Y+ ++ ++ T TG + + + G S + Sbjct: 580 LGYVYRYEYNAYGDIVSQTTPTGNRHEL-GYDMLGRVASYKNPAGDSSQYEYGALGTPQA 638 Query: 171 --------PVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIH 222 P + L + + +SR + Q + +P K Sbjct: 639 NLLQAINYPGGLAELGQYDQRGRRTSTIRKSRDGESLTLHYSLDSAGQTAAITSPGGKTT 698 Query: 223 LYHCDHRGLP---------------------LALVSTEGATEWCAEYDEWGNLLNEENPH 261 +Y D G + G +YD G L E P Sbjct: 699 IYEYDALGRVSKSIDASGHATQMAYNLLHQITRVTDANGNVHTR-QYDRLGRLTEEMRPE 757 Query: 262 QLQQLIRL 269 + Sbjct: 758 GGKTTYAY 765 Score = 50.6 bits (119), Expect = 1e-04, Method: Composition-based stats. Identities = 55/306 (17%), Positives = 84/306 (27%), Gaps = 36/306 (11%) Query: 2 WPDNRIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQY 61 W N R + R T IR D Y YD H T + Sbjct: 371 WDGNYTDRLVDER----GNTRTTYWDYNRRPLRIRHADGSEESYTYDPVH---GETTSHT 423 Query: 62 AEPLVESRYLYDPLGR---RVAKRVWRRERDLT-----------GWMSLSRKPQVTWYGW 107 E + + + +D GR R+ + ER + + VT Y + Sbjct: 424 NELGIVTAWRHDSKGRAVQRIEAQGTSLERITAWEYDELGQIVRQTLGTGAQASVTTYAY 483 Query: 108 DGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSV 167 DG+ D Y + + G + + S + ++ S Sbjct: 484 DGNGNRKTATDAEGGVWSYTHTVTGQIASITNPLGHTTRHEYDSHGNRIKTIYPSGLTSS 543 Query: 168 VFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVY-------TPARK 220 L ++ E A + +S+ L + + + Y TP Sbjct: 544 ARFDALGNETQSMDGEGHATVATYDSQSRLVTATNALGYVYRYEYNAYGDIVSQTTPTGN 603 Query: 221 IHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEESGL 280 H D G + + G EY G L Q I PG E G Sbjct: 604 RHELGYDMLGRVASYKNPAGD-SSQYEYGALGTPQAN-----LLQAINYPGGL--AELGQ 655 Query: 281 YYNRHR 286 Y R R Sbjct: 656 YDQRGR 661 Score = 47.5 bits (111), Expect = 0.001, Method: Composition-based stats. Identities = 41/253 (16%), Positives = 68/253 (26%), Gaps = 48/253 (18%) Query: 9 RDAHYLYRYDRHGRLTEKTDLIPE--------------------GVIRTDDERTHRYHYD 48 Y YD G L +KT+ + + + Y YD Sbjct: 757 EGGKTTYAYDAAGFLVKKTNAAGDVSSYTYNSDGLLTLLTRTSPQAGKPGWSSSITYRYD 816 Query: 49 SQHRLVHYTRTQYAEPLV-ESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGW 107 RL Y + + L+ ++ Y D LGR + L +R GW Sbjct: 817 KAGRLAGYEQKDGSGKLISQADYSRDALGR-------ISQEQLIYGDGANRITATLAQGW 869 Query: 108 DGDRLTTIQN--DRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGG 165 D D T Q D + Y G + + + L +Q G Sbjct: 870 DADGRKTSQGYPDSSAAAFSYAKGHLKEATQPGSTDKITWADYQWMLPTKVQYPGASR-- 927 Query: 166 SVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYH 225 S+ + +++ A+ ++ + Q D + RK Sbjct: 928 SIAYDGFYRIQGIQVQGASNANLLT----------------LGYQYDVESSITRKTLQLG 971 Query: 226 CDHRGLPLALVST 238 D G Sbjct: 972 SDVNGSVDYAYDA 984 Score = 46.3 bits (108), Expect = 0.003, Method: Composition-based stats. Identities = 44/307 (14%), Positives = 74/307 (24%), Gaps = 55/307 (17%) Query: 8 ARDAHYLYRYDRHGRLTEKTDLIPEGV--------------------------------- 34 R + Y YD +G+LT +TD + + Sbjct: 240 TRGNRWTYTYDGNGQLTSRTDPLGGKITAQYSASAPAPAAQFTLGNLGITLDPTGTSGTT 299 Query: 35 ----IRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYLYDPLGRRVAKRVWRRERDL 90 R + D Q + + DP G R+ V ++D Sbjct: 300 RKLQTNWGGGRVGSFS-DRQGTTTGSVQYLRESRKFIATLT-DPRGNRL---VVHYDKDG 354 Query: 91 TGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRR 150 + WDG+ + ++R +T Y + PL R+ A G Sbjct: 355 LESGRTLNDKTIRQRSWDGNYTDRLVDERGNTRTTYWDYNRRPL-RIRHADGSEESYTYD 413 Query: 151 SLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQ 210 + E G + + E W + + Sbjct: 414 PVHGETTSHTNELGIVTAWRHDSKGRAVQRIE--AQGTSLERITAWEYDELGQIVRQTLG 471 Query: 211 MDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRLP 270 + Y D G EG W + G + + NP Sbjct: 472 TGAQASVTT----YAYDGNGNRKTATDAEGG-VWSYTHTVTGQIASITNPLGHTTR---- 522 Query: 271 GQQYDEE 277 +YD Sbjct: 523 -HEYDSH 528 Score = 42.9 bits (99), Expect = 0.029, Method: Composition-based stats. Identities = 43/275 (15%), Positives = 75/275 (27%), Gaps = 36/275 (13%) Query: 13 YLYRYDRHGRLTEKTDLIPEG------------VIRTDDERTHRYHYDSQH--RLVHYTR 58 Y Y Y+ +G + +T + + +Y Y + + Sbjct: 584 YRYEYNAYGDIVSQTTPTGNRHELGYDMLGRVASYKNPAGDSSQYEYGALGTPQANLLQA 643 Query: 59 TQYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMS-----------LSRKPQVTWYGW 107 Y L E YD GRR + R+ + S + T Y + Sbjct: 644 INYPGGLAELG-QYDQRGRRTSTIRKSRDGESLTLHYSLDSAGQTAAITSPGGKTTIYEY 702 Query: 108 DGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSV 167 D + D + T + RV A G + Q L ++ E G + Sbjct: 703 DALGRVSKSIDASGHATQMAYNLLHQITRVTDANGNVHTRQYDRLGRLTEEMRPEGGKTT 762 Query: 168 VFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCD 227 ++ + + A VS + L P ++ + D Sbjct: 763 YAYDAAGFLVKKTNA---AGDVSSYTYNSDGLLTLLTRTSPQAGKPGWSSSITYRY---D 816 Query: 228 HRGLP--LALVSTEGATEWCAEY--DEWGNLLNEE 258 G G A+Y D G + E+ Sbjct: 817 KAGRLAGYEQKDGSGKLISQADYSRDALGRISQEQ 851 Score = 42.5 bits (98), Expect = 0.036, Method: Composition-based stats. Identities = 54/301 (17%), Positives = 90/301 (29%), Gaps = 54/301 (17%) Query: 24 TEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYLYD-PLGRRVAKR 82 + + + + D R + YD+Q R+ YT ++ R+ YD R+ Sbjct: 140 IRQVNRPGQDGWQWYDRRGNTIDYDAQGRIQGYTDFNG----IQVRFSYDSASSIRILDH 195 Query: 83 VWRRERDLTGWMSL-----SRKPQVTWYGWDG---DRLTTIQNDRTRIQTIYQPGSFTPL 134 + L + R + Y W G R T D + Y L Sbjct: 196 HGQLALRLNLADGIVTSIEDRSGNIVRYTWAGSGITRRLTEVLDTRGNRWTYTYDGNGQL 255 Query: 135 I-RVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSEES 193 R + G++ S Q + G + P +L++ RV S Sbjct: 256 TSRTDPLGGKITAQYSASAPAPAAQFTLGNLGITLDPTGTSGTTRKLQTNWGGGRVGSFS 315 Query: 194 RRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGA-TEWCAEYD--E 250 R + G +V+ ++ + T L G + D E Sbjct: 316 DRQGTTTG-SVQYLRESRKFIAT------------------LTDPRGNRLVVHYDKDGLE 356 Query: 251 WGNLLNEENPHQLQQLIRLPGQQYDEE-----SGLYYNRH----RY---------YDPLQ 292 G LN++ Q + DE + YNR R+ YDP+ Sbjct: 357 SGRTLNDKTIRQRSWDGNYTDRLVDERGNTRTTYWDYNRRPLRIRHADGSEESYTYDPVH 416 Query: 293 G 293 G Sbjct: 417 G 417 >UniRef50_B6VUY0 Putative uncharacterized protein n=2 Tax=Bacteroides RepID=B6VUY0_9BACE Length = 1442 Score = 163 bits (411), Expect = 2e-38, Method: Composition-based stats. Identities = 76/361 (21%), Positives = 120/361 (33%), Gaps = 68/361 (18%) Query: 11 AHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESR- 69 Y Y + RL K + + V+R Y YD L+ Q +E V R Sbjct: 982 GAYRYEWGVANRLLAKENELTGTVMR--------YDYDRFDFLIRQETIQGSETDVIYRV 1033 Query: 70 -------------------------------YLYDPLGRRVAKRVWRRERDLTGWMSLSR 98 Y YD G + + + + + Sbjct: 1034 PDFVGNLFETPDKKDRKYGAGGKLLEDPDCFYHYDDEGNLIFREFKQLQETGVRYDRKRM 1093 Query: 99 KPQVTWYGWDGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTL-- 156 + + G R +Y+ S L +V G + + +L Sbjct: 1094 EKER------GIRCLATGTG-----WLYEWASNGMLKKVIRPDGRPVEFRYDALGRRTAK 1142 Query: 157 -------QQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQN 209 + + + ++ + E +E+ W+ G V + Sbjct: 1143 QYFGKITRWVWDRNVPIHEWSYKVIDIQSDEEESTPLKEPTEDITTWVFEAGTFVPTAKI 1202 Query: 210 QMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRL 269 Q K + D+ G P+ + +G W D +G +L + + R Sbjct: 1203 QD-------GKQYSIVSDYLGTPIQMYDEQGNKTWDCTLDIYGKVLAIDKGTEFDCPFRY 1255 Query: 270 PGQQYDEESGLYYNRHRYYDPLQGRYITQDPIGLK-GGWNFYQYPLNPVQYIDSMGLASK 328 GQ DEE+GLYYNR RYYD G YI+QDPIGL+ NFY Y + ID +GL + Sbjct: 1256 QGQYEDEETGLYYNRFRYYDSNAGSYISQDPIGLESDTLNFYDYVCDLNDGIDPLGLYNP 1315 Query: 329 Y 329 Y Sbjct: 1316 Y 1316 Score = 60.2 bits (144), Expect = 2e-07, Method: Composition-based stats. Identities = 41/277 (14%), Positives = 79/277 (28%), Gaps = 28/277 (10%) Query: 13 YLYRYDRHGRLTEKTDLIPEGV------------IRTDDERTHRYHYDSQHRLVHYTRTQ 60 + YD GRL + D+ + D HR+ YD+ +VH + Sbjct: 689 RRWEYDGRGRLVQAVDVKGNVTRYAYDRADNLIRLEEPDGNVHRFEYDAMGNMVHAS--- 745 Query: 61 YAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRK------PQVTWYGWDGDRLTT 114 + + E R+ Y LG ++ R L + ++ DG Sbjct: 746 --DNIREVRFTYGALGVLKSREQERHHITFGYNSELQLRRIGNEAGDNYFFELDGLGQVV 803 Query: 115 IQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLV 174 + ++ Y+ + RV G+ + Q L + L++ + S+ Sbjct: 804 TETGFDGLRREYERDGAGRVTRVNRPGGKWTEYQYDGLDNILKEEQYDGEVSLYTYDKDG 863 Query: 175 QMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLA 234 ++ SE L + + + + D R D Sbjct: 864 MLVKAKNSENLLEFTRDRKTGLVTEERQGEHTVSRTYDDEGYCTRITSSLGAD----IRH 919 Query: 235 LVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRLPG 271 EG + + W + L+ G Sbjct: 920 TYDREGNLQTMQAGESW-QASWVRDNTGLEVQRTFSG 955 Score = 47.1 bits (110), Expect = 0.002, Method: Composition-based stats. Identities = 49/284 (17%), Positives = 79/284 (27%), Gaps = 66/284 (23%) Query: 12 HYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAE-------P 64 + YD R+ +T E V T + R D Q R+ T + Sbjct: 626 RLSWDYDGLDRVVSRTTPGGETVKYTYEGGVLRTITDGQGRVYTLTFNDRYDLELLQFPN 685 Query: 65 LVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQT 124 + R+ YD GR V ++ K VT Y +D Sbjct: 686 GLFRRWEYDGRGRLV--------------QAVDVKGNVTRYAYD---------------- 715 Query: 125 IYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEI 184 LIR+E G + + + ++ + + S + Sbjct: 716 -----RADNLIRLEEPDGNVHRFEYDAMGNMVHASDNIREVRFTYG-------------A 757 Query: 185 LADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEW 244 L S E R + G E ++ + + D G + +G Sbjct: 758 LGVLKSREQERHHITFGYNSELQLRRIGNEAGDN---YFFELDGLGQVVTETGFDG-LRR 813 Query: 245 CAEYDEWGNLLNEENPHQLQQLIRLPG-------QQYDEESGLY 281 E D G + P + G +QYD E LY Sbjct: 814 EYERDGAGRVTRVNRPGGKWTEYQYDGLDNILKEEQYDGEVSLY 857 Score = 44.0 bits (102), Expect = 0.011, Method: Composition-based stats. Identities = 39/255 (15%), Positives = 73/255 (28%), Gaps = 33/255 (12%) Query: 11 AHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRY 70 A + YDR G L + + + + + V Sbjct: 915 ADIRHTYDREGNLQTMQA-----------GESWQASWVRDN--TGLEVQRTFSGGVTVST 961 Query: 71 LYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGW-DGDRLTTIQNDRTRIQTIYQPG 129 D GR V K V + + Y W +RL +N+ T Y Sbjct: 962 ERDRFGREVRKSVRSGGIERGAY----------RYEWGVANRLLAKENELTGTVMRYDYD 1011 Query: 130 SFTPLIRVETATGELAKTQRR--SLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILAD 187 F LIR ET G R L ++ + L++ D Sbjct: 1012 RFDFLIRQETIQGSETDVIYRVPDFVGNLFETPDKKDRKYGAGGKLLEDPDCFYHYDDEG 1071 Query: 188 RVSEESRRWLASCGLTVEQMQ----NQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATE 243 + + L G+ ++ + + + T ++ + + G+ ++ +G Sbjct: 1072 NLIFREFKQLQETGVRYDRKRMEKERGIRCLATGTGWLYEWASN--GMLKKVIRPDGRPV 1129 Query: 244 WCAEYDEWGNLLNEE 258 YD G ++ Sbjct: 1130 -EFRYDALGRRTAKQ 1143 >UniRef50_C5SID5 YD repeat protein n=1 Tax=Asticcacaulis excentricus CB 48 RepID=C5SID5_9CAUL Length = 1550 Score = 162 bits (410), Expect = 3e-38, Method: Composition-based stats. Identities = 82/385 (21%), Positives = 125/385 (32%), Gaps = 69/385 (17%) Query: 2 WPDNRIARDAHYLYRYDRHGRLTEKT---------------------------------- 27 W + Y+YD HG+ T T Sbjct: 842 WLASETGPKGSVSYQYDTHGKRTRLTYPDGFYVTYEYNDGDQLVAIKENGTTTIASFTAD 901 Query: 28 DLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPL--VESRYLYDPLGRRVAKRVWR 85 D V+ + T Y YDSQ RL T T P + Y Y P A ++ Sbjct: 902 DYSRRHVLNRGNGVTTTYDYDSQSRLNGLTTTIPGSPADNIVMGYAYSP-----ADQIKT 956 Query: 86 RERDLTGWMSLSRKPQVTWYGWDG-DRLTTIQNDRTRIQ---TIYQPGSFTPLIRVE--- 138 R TG++ Q T Y +G +++ T+ + G+ T V Sbjct: 957 RSVGTTGYLMTGMSSQTTGYTPNGLNQIATVAGTNLSYDARGNMTSDGAVTYSYNVNNLL 1016 Query: 139 --TATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSEESRRW 196 T+TG + T+ + G + F ++ L R Sbjct: 1017 TGTSTGASLAYDSENRLYTIS----KGGVTTTFVYDGTDLIAEYNGSTLLRR-------- 1064 Query: 197 LASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLN 256 G ++ +P T + D++G + + ++ GA+ YDE+G Sbjct: 1065 -YVHGPDSDEPLVWYEPSETGVLAKRYFTADNQGSIIGITASNGASWAINAYDEYGVPRA 1123 Query: 257 EENPHQLQQLIRLPGQQYDEESGLYYNRHRYYDPLQGRYITQDPIGLKGGWNFYQYPLN- 315 + GQ Y E GLYY + R Y P GR++ DPIG G N Y Y N Sbjct: 1124 GN-----AGRFQYTGQVYLSEIGLYYYKARLYSPTLGRFMQTDPIGYGDGMNIYAYVQND 1178 Query: 316 PVQYIDSMGLASKYGHLNNGGYGAR 340 P+ D GL ++ G Sbjct: 1179 PINGSDPTGLTGATDCHSDSCRGKA 1203 Score = 50.2 bits (118), Expect = 2e-04, Method: Composition-based stats. Identities = 58/351 (16%), Positives = 93/351 (26%), Gaps = 69/351 (19%) Query: 5 NRIARDAH----YLYRYDRHGRLTEKTDLIPEGVIRT---------------DDERTHRY 45 NR+ + + Y Y G + T P+G R + R Y Sbjct: 296 NRVHQVTQGGSTWTYAYSTSGTVLTTTVTNPQGNTRVLQSDTGNLHVLSVQDEAGRVLSY 355 Query: 46 HYD-SQHRLVHYTRTQYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQ--- 101 Y + + T + Y YD G V + + S + Sbjct: 356 TYSPTTGYVTRVTNPDGNTGGGYTDYTYDSRGNVTQMTVVPQSGSGLPNIVTSATYETGC 415 Query: 102 ------------------VTWYGWDGD---RLTTIQN--DRTRIQTIYQPGSFTPLIRVE 138 T Y +DG+ LT + Q Y TP I+ Sbjct: 416 ANIKTCNKPLTVTDATGVTTTYTYDGNSGSVLTETSPTVNGVATQIRYSYSQVTPQIK-N 474 Query: 139 TATGELAKTQRRSLADT---LQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSEESRR 195 +A +A T L T + + D V V + + R Sbjct: 475 SAGALVASTPVWRLTKTSTCMTTASCADTTDEVKTVVSYNSPNVFPTTTTTSRGDGSYAN 534 Query: 196 WLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALV--STEG-----ATEWCAEY 248 V + P + Y+ D+ + ++ +G Y Sbjct: 535 TTTLTYDAVGNITVSDGPKPGTVDATYYYY-DNLRRVVGMIGPDPDGSGPLNRPAARKTY 593 Query: 249 DEWGNL-LNEENPHQLQQLIRLPG---------QQYDEESGLYYNRHRYYD 289 D G+L ++E L G +Y +GL RYYD Sbjct: 594 DVDGHLTVDESGTVTTVSYAALTGSMTVQEKETNEYSSTTGLA-MTARYYD 643 Score = 49.8 bits (117), Expect = 2e-04, Method: Composition-based stats. Identities = 47/290 (16%), Positives = 83/290 (28%), Gaps = 58/290 (20%) Query: 7 IARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQY----- 61 + + YD GR+ K+ T + Y++ +LV +T Sbjct: 788 LRDGQTINFAYDAMGRVNGKS-----------GALTESFTYNNFGQLVSHTNNGVTSTSA 836 Query: 62 ----------AEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDR 111 P Y YD G+R ++ VT+ DGD+ Sbjct: 837 YLSMGWLASETGPKGSVSYQYDTHGKRTR-------------LTYPDGFYVTYEYNDGDQ 883 Query: 112 LTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPP 171 L I+ + T + ++ + G S + + G Sbjct: 884 LVAIKENGTTTIASFTADDYSRRHVLNRGNGVTTTYDYDSQSRLNGLTTTIPGSPA--DN 941 Query: 172 VLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGL 231 +++ +I V T N ++ + T A Y D RG Sbjct: 942 IVMGYAYSPADQIKTRSVGTTGYLMTGMSSQTTGYTPNGLNQIATVAGTNLSY--DARGN 999 Query: 232 PLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEESGLY 281 + ++GA + + NLL + YD E+ LY Sbjct: 1000 ---MT-SDGAVTYSYNVN---NLLTGTSTGASLA--------YDSENRLY 1034 >UniRef50_Q10YX3 YD repeat protein n=1 Tax=Trichodesmium erythraeum IMS101 RepID=Q10YX3_TRIEI Length = 3193 Score = 162 bits (409), Expect = 3e-38, Method: Composition-based stats. Identities = 75/362 (20%), Positives = 129/362 (35%), Gaps = 37/362 (10%) Query: 3 PDNRIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYA 62 DN++ + + Y YD GR + L + Y YD+ +L+ Sbjct: 1978 ADNQVN--SQFEYSYDDLGRRSTAKTLDGD----------WEYGYDAVGQLISAKFDSSN 2025 Query: 63 E--PLVESRYLYDPLGRRVA-KRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDR 119 P Y YD +G R++ K + T ++ + Y +D D + + Sbjct: 2026 SEIPDQNLSYTYDAVGNRISTKVNGQNTDYETNNLNQYGQVGDIEYEYDADGNLIEKTEG 2085 Query: 120 TRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDR 179 + Y+ L++V G + + L + + + + P + Sbjct: 2086 GNV-WQYEYNVENRLVKVVEPDGIETEYEYDVLGNRIATVYDGNRTEYLVDPFGFGNVVG 2144 Query: 180 LESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTE 239 + + R++ GL + Y + G + L + Sbjct: 2145 EFQD------GDLVARYVHGLGLVSRVDSDGEGN---------FYDFNAIGSTVGLSDGQ 2189 Query: 240 GATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQ--QYDEESGLYYNRHRYYDPLQGRYIT 297 G Y +G + E+ Q+ GQ +E +GL + R R+YD GR+++ Sbjct: 2190 GDYVNRYHYAPFGKDVFEQ--EQVANQFEFVGQFGVMEEANGLDFMRARFYDGETGRFVS 2247 Query: 298 QDPIGLKGG-WNFYQYPLN-PVQYIDSMGLASKYGHLNNGGYGARPNKPPTPDPSKLPDI 355 DPIGL GG N Y+Y N PV YID GL SK + + R K + L + Sbjct: 2248 MDPIGLNGGDENLYRYVGNGPVDYIDPEGLKSKDKNDSIKRMIERAKKLREREKKYLGNG 2307 Query: 356 AK 357 K Sbjct: 2308 GK 2309 Score = 54.0 bits (128), Expect = 1e-05, Method: Composition-based stats. Identities = 45/294 (15%), Positives = 81/294 (27%), Gaps = 41/294 (13%) Query: 8 ARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDER-----------THRYHYDSQHRLVHY 56 R+ Y YD RL K + + D+R YD RL Sbjct: 1830 RREGQVGYSYDDVDRLIHKQFGNGDSLNYEYDDRGNLIKVTDESGETVMVYDDADRLTKI 1889 Query: 57 TRTQYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVT--------WYGWD 108 T E +E Y RR + G+ + R ++T Y +D Sbjct: 1890 TYP--TERWLEFTYE---NNRRSSMVDDSGGIVKYGYDGVGRLRKLTDGENELIVQYSYD 1944 Query: 109 GD-RLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQ--RRSLADTLQQSGGED-G 164 RL +N +Y+ L+++ + S D ++S + Sbjct: 1945 NIGRLAKEENGNGTAT-VYEYDDVGQLVKLTNFDADNQVNSQFEYSYDDLGRRSTAKTLD 2003 Query: 165 GSVVFPPVLVQMLDRLESEILADRVSEESRRWLASC-GLTVEQMQNQMDPVYTPARKIHL 223 G + V L + + + +++ + G + N + Y Sbjct: 2004 GDWEYGYDAVGQLISAKFDSSNSEIPDQNLSYTYDAVGNRISTKVNGQNTDYETNNLNQY 2063 Query: 224 YHCDHRGLPLALVSTEGAT--------EWCAEYDEWGNLLNEENPHQLQQLIRL 269 G +G W EY+ L+ P ++ Sbjct: 2064 ---GQVGDIEYEYDADGNLIEKTEGGNVWQYEYNVENRLVKVVEPDGIETEYEY 2114 Score = 52.9 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 41/271 (15%), Positives = 75/271 (27%), Gaps = 47/271 (17%) Query: 12 HYLYRYDRHGRLTEKTDLIPE------------GVIRTDDERTHRYHYDSQ-HRLVHYTR 58 RYD++G L++ D T + Y+ ++L T Sbjct: 1728 QTQMRYDQNGNLSQVVAPDGSVTGFIYCGCGSLLAQTGADGNTTNFEYEPNFNQLSVVTD 1787 Query: 59 TQYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQND 118 + + +Y YD G RD + +D + + + Sbjct: 1788 AKDN----QLKYSYDDRGNATDIIYADGSRD--------------RFKYDSEGNLILTTN 1829 Query: 119 RTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLD 178 R Q Y LI + G+ + + ++ + +V+ Sbjct: 1830 RREGQVGYSYDDVDRLIHKQFGNGDSLNYEYDDRGNLIKVTDESGETVMVYDDAD----- 1884 Query: 179 RLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVST 238 +++ + RWL N+ + + I Y D G L Sbjct: 1885 ------RLTKITYPTERWL-----EFTYENNRRSSMVDDSGGIVKYGYDGVGRLRKLTDG 1933 Query: 239 EGATEWCAEYDEWGNLLNEENPHQLQQLIRL 269 E YD G L EEN + + Sbjct: 1934 ENELIVQYSYDNIGRLAKEENGNGTATVYEY 1964 >UniRef50_Q396B9 Rhs family protein n=1 Tax=Burkholderia sp. 383 RepID=Q396B9_BURS3 Length = 1556 Score = 162 bits (409), Expect = 3e-38, Method: Composition-based stats. Identities = 79/368 (21%), Positives = 133/368 (36%), Gaps = 32/368 (8%) Query: 12 HYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYL 71 Y Y G L +D + + +Y YD HRL+ + + RY Sbjct: 1005 RVTYEYSGAGELRRISD---------NQKGDTQYQYDRAHRLIG----EMSSGWQACRYE 1051 Query: 72 YDPLGRRVAK-RVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQPGS 130 YDP G +A + +S + + Q Y +D + + +T Y+ S Sbjct: 1052 YDPAGNLLALPTCPMMQYTGGNRLSTTSRGQ---YTYDERNHLSEEIAHDGRRTTYRYDS 1108 Query: 131 FTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVS 190 L+RVE + A T +G ++ +V + DRL +++ Sbjct: 1109 MDLLVRVEWSDRHDAWTAEYDGLCRQVIAGTDNDSTVYY-----WDEDRLAAQVDPGGKV 1163 Query: 191 EESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWCAEY-D 249 + + + + + G+P + G W A Sbjct: 1164 RVFVYVDEKSLVPFMFIDYPSIDSPATSGSEYFVLFNQVGMPERIEDVSGRAVWLARKIH 1223 Query: 250 EWGNLLNEENPHQLQQLIRLPGQQYDEESGLYYNRHRYYDPLQGRYITQDPIGLKGGWNF 309 +G ++ + L+ +R PG + E+GL+ NR R Y+P+ GRY+ DP+G GG N Sbjct: 1224 SYG-VIEVAEGNSLEYDVRWPGHLFQRETGLHVNRFRSYNPMLGRYLQSDPVGHAGGGNL 1282 Query: 310 YQYPLNPVQYIDSMGLASKYGHLNNGGYGARPNKPPTPD------PSKLPDIAKQLRLPY 363 Y Y NPV +D +GL + + P P ++L +AK R Sbjct: 1283 YTYSANPVVEVDVLGLNAHVHGED--ASEPSPEGPAVAGRTQELTKAELNHLAKIERRTA 1340 Query: 364 PIDQASSA 371 D A Sbjct: 1341 ERDAAIER 1348 Score = 53.3 bits (126), Expect = 2e-05, Method: Composition-based stats. Identities = 39/236 (16%), Positives = 65/236 (27%), Gaps = 20/236 (8%) Query: 10 DAHYLYRYDRHGRLTEKTD---LIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLV 66 Y YD G L + G R +Y YD ++ L + A Sbjct: 1045 WQACRYEYDPAGNLLALPTCPMMQYTGGNRLSTTSRGQYTYDERNHL----SEEIAHDGR 1100 Query: 67 ESRYLYDPLGRRVAKRVWRRERDLTGWMS-------LSRKPQVTWYGWDGDRLTTIQNDR 119 + Y YD + V R T T Y WD DRL + Sbjct: 1101 RTTYRYDSMDLLVRVEWSDRHDAWTAEYDGLCRQVIAGTDNDSTVYYWDEDRLAAQVDPG 1160 Query: 120 TRIQ-TIY-QPGSFTPLIRVETATGELAKT---QRRSLADTLQQSGGEDGGSVVFPPVLV 174 +++ +Y S P + ++ + + T + L + + + S + Sbjct: 1161 GKVRVFVYVDEKSLVPFMFIDYPSIDSPATSGSEYFVLFNQVGMPERIEDVSGRAVWLAR 1220 Query: 175 QMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRG 230 ++ E+ E RW + Y P D G Sbjct: 1221 KIHSYGVIEVAEGNSLEYDVRWPGHLFQRETGLHVNRFRSYNPMLG-RYLQSDPVG 1275 Score = 47.1 bits (110), Expect = 0.002, Method: Composition-based stats. Identities = 49/298 (16%), Positives = 76/298 (25%), Gaps = 45/298 (15%) Query: 4 DNRIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAE 63 D + R YD+ GR+ E +G D R RY YD+++ L Y A Sbjct: 490 DGNVRRTVSLR--YDQSGRIVEVVLTDVDGR----DTRIARYAYDTENCLTSYRNALDA- 542 Query: 64 PLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQ--------VTWYGWDGDRLTTI 115 S Y YD R L + S R + + + R Sbjct: 543 ---ISTYEYDAQRRMARLAGANGYSFLYCYDSEGRCVESAGQDRMWHVRFQYRPGRTIVT 599 Query: 116 QNDRTRIQTIYQPGS----------------FTPLIRVETATGELAKTQRRSLADTLQQS 159 + D R +Y P R+ +T R Sbjct: 600 EGDGGRWTILYNEMGTITHVVDPYGGIAEYVLDPSGRIVEEIDSGGRTLRWLYDARAGTI 659 Query: 160 GGEDGGSVVFP----------PVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQN 209 G D ++P P+ + + + I + + + Sbjct: 660 GRLDRFGNLWPNKDELPNLPNPLAHHVPNAMRGLIWGEFNVDNLTDTVLLPQEIDHWAWG 719 Query: 210 QMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLI 267 D G +A + G T EYD NLL + Sbjct: 720 SATDAVARWPDERRQQRDVAGRVIARTNISGHT-ERFEYDADDNLLLRFDQDGAATRY 776 Score = 46.7 bits (109), Expect = 0.002, Method: Composition-based stats. Identities = 56/292 (19%), Positives = 81/292 (27%), Gaps = 55/292 (18%) Query: 7 IARDAHYL--YRYDRHGRLTEKTDLIPEGVIRTD-------------DERTHRYHYDSQH 51 + R Y YD RL EK D + ++R + H Y YD Sbjct: 829 VTRHGRLRESYVYDGGDRLIEKRDGAGKWLLRFEIGENGLPRERTLASGSKHVYEYDRFG 888 Query: 52 RLVHYTRTQYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDR 111 L + + E +D LGRR + + + + T Y +R Sbjct: 889 HLTKASTDAH-----EITRTFDNLGRRTSDKC---DGLGVQHEYDGHRLGRTTYL---ER 937 Query: 112 LTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPP 171 + Q+I PG T ++ L + + A + G G + + Sbjct: 938 FEVVYTYTASGQSIRTPGGRTHCVQQGKDGRVLLRLANGTQACYMFDDVGRCTGRITWRT 997 Query: 172 VLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGL 231 R+ E E R G T Q + Sbjct: 998 DSPAAFHRVTYEYSG--AGELRRISDNQKGDTQYQYDRAHRLIGEM-------------- 1041 Query: 232 PLALVSTEGATEWCAEYDEWGNLLNEEN--PHQLQQLIRLP----GQQ-YDE 276 + G EYD GNLL Q RL GQ YDE Sbjct: 1042 ------SSGWQACRYEYDPAGNLLALPTCPMMQYTGGNRLSTTSRGQYTYDE 1087 Score = 44.4 bits (103), Expect = 0.008, Method: Composition-based stats. Identities = 40/294 (13%), Positives = 72/294 (24%), Gaps = 54/294 (18%) Query: 14 LYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYLY- 72 + YD L + D R R ++ L+ E + RY Y Sbjct: 754 RFEYDADDNLLLRFDQDGAAT------RYTRCSWN----LLASEENALGETI---RYRYT 800 Query: 73 ---------DPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQ 123 D G + + ++ +T R + Y GDRL ++ + Sbjct: 801 SRRDVASVIDANGN-ESAYSYDFKKRMTSVTRHGRLRESYVYD-GGDRLIEKRDGAGKWL 858 Query: 124 TIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGG-SVVFPPVLVQMLDRLES 182 ++ G L R T L ++ + + F + + D+ + Sbjct: 859 LRFEIGE-NGLPRERTLASGSKHVYEYDRFGHLTKASTDAHEITRTFDNLGRRTSDKCDG 917 Query: 183 EILADRVS--EESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLA------ 234 + R V + TP + H G L Sbjct: 918 LGVQHEYDGHRLGRTTYLERFEVVYTYTASGQSIRTPGGRTHCVQQGKDGRVLLRLANGT 977 Query: 235 ----LVST----EGATEWC-----------AEYDEWGNLLNEENPHQLQQLIRL 269 + G W EY G L + + + Sbjct: 978 QACYMFDDVGRCTGRITWRTDSPAAFHRVTYEYSGAGELRRISDNQKGDTQYQY 1031 >UniRef50_A6GBQ3 Putative uncharacterized protein n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6GBQ3_9DELT Length = 2507 Score = 161 bits (408), Expect = 4e-38, Method: Composition-based stats. Identities = 80/377 (21%), Positives = 117/377 (31%), Gaps = 64/377 (16%) Query: 9 RDAHYLYRYDRHGRLTEKTDLIPEGVIRTDD--ERTHRYHYDSQHRLVHYTRTQYAEPLV 66 R Y YD G +T+ D + V + + Y YD +RLV T ++A Sbjct: 1788 RLQDLRYHYDPVGNITDIRDHAQQTVFFQNQVVHAANSYVYDPLYRLVEATGREHASQGT 1847 Query: 67 ---------------------------ESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRK 99 RY YD +G +V +GW Sbjct: 1848 SQRTHAQLPPDGAAAPMANDPNALRRYTQRYSYDGVGNLT--KVQHLPSTGSGW------ 1899 Query: 100 PQVTWYGWDGDRLTTIQNDRTRIQTIYQP-----GSFTPLIRVETAT------------G 142 + Y G+RL +Y S+ AT Sbjct: 1900 TRHYQYATTGNRLVATSAPGDSQGPLYSDTPTYSHSYAHDAHGNLATMPHLQAMAWDELE 1959 Query: 143 ELAKTQRRSLADTLQQSGGEDGGSVVF---PPVLVQMLDRLESEILADRVSEESRRW-LA 198 +L + + S Q +GG+ V ++ + W Sbjct: 1960 QLHRVEVGSQTVYCQYAGGQRVRKFVVHSGSTTEERVYVGAIERYRKRVNGQLEEEWQTL 2019 Query: 199 SCGLTVEQMQNQMDPVYT--PARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLN 256 G + + + +D P +H G VS GA EY +G Sbjct: 2020 HVGGALVETRTVLDGAAANDPTPSWRFQLSNHLGSATTEVSETGAIISHEEYHPYGTSAY 2079 Query: 257 EENPHQLQQL---IRLPGQQYDEESGLYYNRHRYYDPLQGRYITQDPIGLKGGWNFYQYP 313 QL R G + DEE+GL Y+ RYY P GR+ DPIGL G N + Y Sbjct: 2080 RMVDSQLDVPPKRYRFTGMERDEETGLSYHSARYYAPWLGRWTAADPIGLGDGVNRFAYV 2139 Query: 314 -LNPVQYIDSMGLASKY 329 NP ++D G A + Sbjct: 2140 RGNPTNFVDPTGFAGES 2156 Score = 47.5 bits (111), Expect = 0.001, Method: Composition-based stats. Identities = 37/219 (16%), Positives = 59/219 (26%), Gaps = 25/219 (11%) Query: 17 YDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQH-RLVHY--TRTQYAEPLVESRYLYD 73 YD HGR T V R + + YD RL H TRT E L + RY YD Sbjct: 1746 YDVHGRQTR--------VARAANATVTTHDYDPLTFRLRHILTTRTSDGERLQDLRYHYD 1797 Query: 74 PLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQPGSFTP 133 P+G + ++ + + Y + + T + + P Sbjct: 1798 PVGN-ITDIRDHAQQTVFFQNQVVHAANSYVYDPLYRLVEATGREHASQGTSQRTHAQLP 1856 Query: 134 LIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSEES 193 +L Q+ + G++ L Sbjct: 1857 ----PDGAAAPMANDPNALRRYTQRYSYDGVGNLTKVQHLPSTGSGWTRHYQYATTGNRL 1912 Query: 194 RRWLASCGLTVEQMQNQMDPVYTPARKI-HLYHCDHRGL 231 + + P+Y+ H Y D G Sbjct: 1913 --------VATSAPGDSQGPLYSDTPTYSHSYAHDAHGN 1943 >UniRef50_B3PEK8 RHS Repeat family n=1 Tax=Cellvibrio japonicus Ueda107 RepID=B3PEK8_CELJU Length = 2245 Score = 161 bits (406), Expect = 7e-38, Method: Composition-based stats. Identities = 84/404 (20%), Positives = 120/404 (29%), Gaps = 67/404 (16%) Query: 1 MWPDNRIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQ 60 +WPDN Y YD R+ D + G ++ D Y YD L T Sbjct: 1755 VWPDN-----YTVKYVYDALNRI----DQVNAGSLKLAD-----YDYDDLGNLDKVTYGN 1800 Query: 61 YA--------------------EPLVESRYLYD----------PLGRRVAKRVWRRERDL 90 A +Y Y L R WR Sbjct: 1801 GAVSDYQIQKDGDLDFIEHKFVGGSNNVKYTYSFNTAAQLISTSLSNR--SFHWRAPSTT 1858 Query: 91 TGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQPGSFTPLIRVE----TATGELAK 146 +++ Q T G N T +Q + L++ G L Sbjct: 1859 EKLYGVNKLNQYTSVGGVAFNYDKAGNLTTGQLGTFQYDAENRLLQANIGAAGPQGALVA 1918 Query: 147 TQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQ 206 Q GG + L + EI + + G V++ Sbjct: 1919 NYTYDANGRRTQKTVVKGG----VSTITDYLSDGDHEIAEYAANTSTPSKRFIYGKNVDE 1974 Query: 207 MQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATE--WCAEYDEWGNLLNEENPHQLQ 264 + D A H +H+G +A+ + G Y +G + Sbjct: 1975 IIAMQD---VAANTYSYAHRNHQGSVIAVSNASGQVTSNNIYTYSPYGEV-----NSAAG 2026 Query: 265 QLIRLPGQQYDEESGLYYNRHRYYDPLQGRYITQDPIGLKGGWNFYQYPLN-PVQYIDSM 323 R G++ D E+GLYY R RYYDP GR++ DPIG K N Y Y N P+ ID Sbjct: 2027 FPFRYTGRRLDPETGLYYYRARYYDPGLGRFLQTDPIGYKDQMNLYAYVGNDPLNKIDPT 2086 Query: 324 GLASKYGHLNNGGYGARPNKPPTPDPSKLPDIAKQLRLPYPIDQ 367 G +K L R K ++ L Q Sbjct: 2087 GKNAKKPFLKEAAKELR--KEAKRQIKNAKAQGRREALKQERQQ 2128 Score = 44.8 bits (104), Expect = 0.007, Method: Composition-based stats. Identities = 38/262 (14%), Positives = 65/262 (24%), Gaps = 44/262 (16%) Query: 17 YDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHR-LVHYTRTQYAEPLVESRY-LYDP 74 YD G+ T + + T + YD R + ++ + +V YD Sbjct: 1695 YDVFGKPTAISQTGL-------NPNTLTFTYDYADRGVTESSQKIGSSGVVRKVINRYDA 1747 Query: 75 LGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQPGSFTPL 134 G R ++ VW Y +D N + Y L Sbjct: 1748 AGNR-SEIVW-------------PDNYTVKYVYDALNRIDQVNAGSLKLADYDYDDLGNL 1793 Query: 135 IRVETATGELAKTQRRSLADTLQQSGGEDGG------SVVFPPVLVQMLDRLESEILADR 188 +V G ++ Q + D GG + F + L + R Sbjct: 1794 DKVTYGNGAVSDYQIQKDGDLDFIEHKFVGGSNNVKYTYSFNTAAQLISTSLSNRSFHWR 1853 Query: 189 VSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGL------------PLALV 236 + + L + Y A + G + Sbjct: 1854 APSTTEKLYGVNKLNQYTSVGGVAFNYDKAGNLT---TGQLGTFQYDAENRLLQANIGAA 1910 Query: 237 STEGATEWCAEYDEWGNLLNEE 258 +GA YD G + Sbjct: 1911 GPQGALVANYTYDANGRRTQKT 1932 >UniRef50_Q2Y592 Peptidase C39, bacteriocin processing n=1 Tax=Nitrosospira multiformis ATCC 25196 RepID=Q2Y592_NITMU Length = 1599 Score = 160 bits (404), Expect = 1e-37, Method: Composition-based stats. Identities = 74/321 (23%), Positives = 115/321 (35%), Gaps = 38/321 (11%) Query: 40 ERTHRYHYDSQHRLVHYTRTQYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRK 99 +++ Y YD RL+ + Y YD + T S Sbjct: 1200 QKSWHYAYDGADRLLSAQPSSGGS----FSYGYDAADNLTS-LNGALTHYNTVNQLTSFN 1254 Query: 100 PQVTWYGWDGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQS 159 + Y +G+ +++D R YQ + L+ + T R + + Sbjct: 1255 SESFSYDANGN----LKDDGVRT---YQWDAENRLLSISYKNDPSKATTFRYDGMGRRLA 1307 Query: 160 GGEDGGSVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPAR 219 E+ G + + L A + R G+ + Q Sbjct: 1308 IVENNGGAITETRHLWCGATLCQ---ARTAGDVVTRRYYPQGMAIPQ-----------GG 1353 Query: 220 KIHLYHCDHRGLPL-ALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEES 278 + Y DH G + + GA +YD +GN + + R G Y ++S Sbjct: 1354 TLLYYGTDHLGSVRDVMAAQNGAKVASYDYDPYGNQIAGSGRISVD--FRYAGMFYHQQS 1411 Query: 279 GLYYNRHRYYDPLQGRYITQDPIGLKGGWNFYQYP-LNPVQYIDSMGLASKYGHLNNGGY 337 GLY R YDP +++++DPIG KGG N Y Y NP+ ID +GL + L Sbjct: 1412 GLYLTNFRAYDPKTAKWLSRDPIGEKGGLNLYGYVGGNPINMIDPLGLRALPWIL----- 1466 Query: 338 GARPNKPPTPDPSKLPDIAKQ 358 G + TPDPS DIA Q Sbjct: 1467 GGASSDIATPDPS---DIAWQ 1484 Score = 59.0 bits (141), Expect = 3e-07, Method: Composition-based stats. Identities = 46/275 (16%), Positives = 79/275 (28%), Gaps = 19/275 (6%) Query: 11 AHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRY 70 Y YD GRL T+ D+ H + YD+ R+ T ++ Y Sbjct: 849 QTTRYAYDGLGRLISITN--------PDNAVQHSFTYDAFDRVATATDSEGH----TLAY 896 Query: 71 LYDPLGRRV------AKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQT 124 YD L R L + R + T Y +D +R T D T Sbjct: 897 EYDALDRVTQILYPDGTSTLNTYDLLDLVETKDRMGRATSYSYDANRRMTSMTDPAGQTT 956 Query: 125 IYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEI 184 Y L + G + + + + + +D +++ ++ Sbjct: 957 SYSYYRNGVLRSITDGNGNMTRWDIDIQSRPIAKVYADDSRETYAYDSASRLISVTDALG 1016 Query: 185 LADRVSEESRRWLASCGLTVEQMQN-QMDPVYTPARKIHLYHCDHRGLPLALVSTEGATE 243 + LA+ + Y P D G G+ Sbjct: 1017 QTRQYGYTKDDRLAALSYANAISPTPGVSFAYDPYFPRRTTMTDGAGTTQFQYGAVGSLG 1076 Query: 244 WCAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEES 278 E G N+E +Q L R+ ++ D + Sbjct: 1077 ALKLTGENGPYTNDEISYQYDALGRMTSRKVDTIT 1111 Score = 56.7 bits (135), Expect = 2e-06, Method: Composition-based stats. Identities = 23/124 (18%), Positives = 43/124 (34%), Gaps = 27/124 (21%) Query: 5 NRIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEP 64 N++ + YD +G L D+ Y +D+++RL+ + +P Sbjct: 1248 NQLTSFNSESFSYDANGNL--------------KDDGVRTYQWDAENRLLSISYKN--DP 1291 Query: 65 LVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQT 124 + + YD +GRR+A + T + W G L + + Sbjct: 1292 SKATTFRYDGMGRRLA-----------IVENNGGAITETRHLWCGATLCQARTAGDVVTR 1340 Query: 125 IYQP 128 Y P Sbjct: 1341 RYYP 1344 Score = 53.7 bits (127), Expect = 2e-05, Method: Composition-based stats. Identities = 44/269 (16%), Positives = 73/269 (27%), Gaps = 40/269 (14%) Query: 8 ARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVE 67 A D+ Y YD RL TD + +T +Y Y RL + P Sbjct: 993 ADDSRETYAYDSASRLISVTDAL---------GQTRQYGYTKDDRLAALSYANAISPTPG 1043 Query: 68 SRYLYDP-LGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGD----RLTTIQNDRTRI 122 + YDP RR M+ YG G +LT T Sbjct: 1044 VSFAYDPYFPRRT-------------TMTDGAGTTQFQYGAVGSLGALKLTGENGPYTND 1090 Query: 123 QTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLES 182 + YQ + + + ++ D + Q GS F + Sbjct: 1091 EISYQYDALGRMT--SRKVDTITESFAYDRLDRVTQH-TNPLGSFNFSYLGQT------G 1141 Query: 183 EILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHC--DHRGLPLALVSTEG 240 ++L+ + +W ++++ + AR H + Sbjct: 1142 QLLSQQAGAVGTQWGYEDNTHDRRLKSITNS--GLARGFHYATTPENQISTLTETAGGAA 1199 Query: 241 ATEWCAEYDEWGNLLNEENPHQLQQLIRL 269 W YD LL+ + Sbjct: 1200 QKSWHYAYDGADRLLSAQPSSGGSFSYGY 1228 Score = 44.0 bits (102), Expect = 0.011, Method: Composition-based stats. Identities = 34/254 (13%), Positives = 67/254 (26%), Gaps = 39/254 (15%) Query: 10 DAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQH-RLVHYTRTQYAEPLVES 68 + Y+ G R + Y S L +T + + Sbjct: 759 TQARRFTYNSIG---------KPLTAIDPTGRKTSFTYASNDIDLTSIQQTTGSGQATLA 809 Query: 69 RYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQP 128 + Y+ + + T Y ++ D T D T Y Sbjct: 810 AFTYN--------------SQHLPLTATDAAGKTTSYTYNSDGQVTGVTDALGQTTRYAY 855 Query: 129 GSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADR 188 LI + + + D + + +G ++ + LDR+ + D Sbjct: 856 DGLGRLISITNPDNAVQHSFTYDAFDRVATATDSEGHTLAYEYDA---LDRVTQILYPDG 912 Query: 189 VSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWCAEY 248 S + L T ++M Y R++ ++ G T Y Sbjct: 913 TSTLNTYDLLDLVETKDRMGRATSYSYDANRRM-----------TSMTDPAGQTT-SYSY 960 Query: 249 DEWGNLLNEENPHQ 262 G L + + + Sbjct: 961 YRNGVLRSITDGNG 974 >UniRef50_Q2SFS1 Rhs family protein n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SFS1_HAHCH Length = 295 Score = 159 bits (403), Expect = 1e-37, Method: Composition-based stats. Identities = 54/143 (37%), Positives = 73/143 (51%), Gaps = 5/143 (3%) Query: 235 LVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEESGLYYNRHRYYDPLQGR 294 + + EG W A Y +GNL + + +Q +R GQ YDEE+GL+YNR RYYDP R Sbjct: 1 MTNAEGEVVWSARYKAYGNLALQ-DVEDVQNPLRFQGQYYDEETGLHYNRRRYYDPSAAR 59 Query: 295 YITQDPIGLKGGWNFYQYPLNPVQYIDSMGLASKYGHLNNGGYGARPNKPPTPDPSKLPD 354 +I QDP+GL GG N YQY NP ++D GL K N + + + + +K Sbjct: 60 FINQDPVGLLGGDNNYQYAPNPTGWVDPYGLTCKENSWNQFQKDTKGHFANSTEAAKSYQ 119 Query: 355 IAKQ----LRLPYPIDQASSAPN 373 K+ R P D AS P Sbjct: 120 KMKEVEGMPRGSKPDDPASYLPQ 142 >UniRef50_D1SWH5 RHS protein (Fragment) n=1 Tax=Acidovorax avenae subsp. avenae ATCC 19860 RepID=D1SWH5_9BURK Length = 280 Score = 159 bits (403), Expect = 1e-37, Method: Composition-based stats. Identities = 48/142 (33%), Positives = 68/142 (47%), Gaps = 19/142 (13%) Query: 207 MQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEE-------- 258 Q + + ++ +H D GLP + G W A + WG+ L E Sbjct: 1 AQTPSESRLRASAQVSYFHNDPSGLPEEVTDEAGEVRWRASWRTWGSALEERWEAVRIDG 60 Query: 259 -----------NPHQLQQLIRLPGQQYDEESGLYYNRHRYYDPLQGRYITQDPIGLKGGW 307 + L+Q +RL GQ D E+GL+YN RYYDP GR+I+ DPIGL GG Sbjct: 61 SAIPAVQQRHRDEDTLEQNLRLQGQYLDRETGLHYNTFRYYDPDMGRFISPDPIGLAGGL 120 Query: 308 NFYQYPLNPVQYIDSMGLASKY 329 N +Y +NP+ +ID GL + Sbjct: 121 NLQRYAINPLAWIDPWGLCGEK 142 >UniRef50_Q6FD94 Putative RHS-related protein n=1 Tax=Acinetobacter sp. ADP1 RepID=Q6FD94_ACIAD Length = 552 Score = 159 bits (403), Expect = 2e-37, Method: Composition-based stats. Identities = 83/351 (23%), Positives = 128/351 (36%), Gaps = 74/351 (21%) Query: 4 DNRIARDAHYLYRYDRHGRLTEKT----------DLIPEGVIRTDD-ERTHRYHYDSQHR 52 DN + + Y YD G+LT+ T D R + T Y + +R Sbjct: 139 DNSLEVNRSATYTYDAIGQLTKSTSTQYIESWTFDKNSNRSTRVGNTNLTTNYQTNIGNR 198 Query: 53 LVHYTRTQYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDG-DR 111 L T T+ + YD LG + K Y +DG +R Sbjct: 199 LASTTITE------AKSFTYDVLGNLIKKT---------------GHGGTVDYSYDGFNR 237 Query: 112 LTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPP 171 L T++ Y + +++GG + ++ P Sbjct: 238 LKTVKAGSNSTNYDYDVFNL-----------------------RTRKTGGAGNVNYIYSP 274 Query: 172 VLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGL 231 + + S+ + S ++ G + ++N ++ H DH G Sbjct: 275 DGRLLGESNTSD------TNISTAYVWLYGQVIGVVRN---------NTLNFVHNDHLGR 319 Query: 232 PLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEESGLYYNRHRYYDPL 291 P L + W ++ + + + + + + Q I LPGQ YD ESGL+YN +RY+D Sbjct: 320 PEVLTNLSKTVVWKSQNNSYDSNVIQSSIGQF--NIGLPGQYYDVESGLWYNWNRYFDGT 377 Query: 292 QGRYITQDPIGLKGGWNFYQYP-LNPVQYIDSMGLASKYGHLNNGGYGARP 341 GRY DPIGL GG N Y Y NPV +ID GL S G G Sbjct: 378 VGRYTQPDPIGLAGGVNTYTYVGNNPVNFIDPYGLWSLSIEGYYGVGGGAS 428 >UniRef50_A3RZQ8 Core protein n=21 Tax=Ralstonia solanacearum RepID=A3RZQ8_RALSO Length = 782 Score = 159 bits (402), Expect = 2e-37, Method: Composition-based stats. Identities = 76/319 (23%), Positives = 110/319 (34%), Gaps = 29/319 (9%) Query: 17 YDRHGRLTEKTDLIPEGVIR--TDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYLYDP 74 YD R++ T G T + YD Q RL+ Y ++ Y YD Sbjct: 326 YDAASRISAYTHTDTSGGTGSSTATAANQTFGYDDQDRLISYLPANSSQ-----SYSYDA 380 Query: 75 LGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQPGSFTPL 134 G R + + T + +R+ T + + + Y L Sbjct: 381 NGNRTGQTIGGNSYTQTIDPASNRQTVSTGPTTTTNSYDAAGSLTSDGTVTYSYSDRGRL 440 Query: 135 IRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSEESR 194 V T G +L + +SG + + D Sbjct: 441 ASV-TKNGTTTSYLYNALGQRVVKSGSNVPTG--------------ATRYVYDEAGHLIG 485 Query: 195 RWLASCGLTVEQMQNQMDPVYTPARKI-HLYHCDHRGLPLALVSTEGATEWCAE-YDEWG 252 + S E + PV T + + D P + T W + D +G Sbjct: 486 EYDQSGNAIQETVYLGDTPVVTIKNATPYYIYADQIDTPRVITDTNNLMVWRWDQTDPFG 545 Query: 253 NLLNEENP---HQLQQLIRLPGQQYDEESGLYYNRHRYYDPLQGRYITQDPIGLKGG-WN 308 L +ENP R PGQ YD+E+G +YN +R YDP GRY+ DPIGL GG W+ Sbjct: 546 ATLPDENPTSLGAFTYNPRFPGQVYDQETGKHYNANRDYDPASGRYVQSDPIGLNGGQWS 605 Query: 309 FYQYP-LNPVQYIDSMGLA 326 Y Y P +Y D GL Sbjct: 606 TYAYVDGQPTRYTDPKGLC 624 Score = 54.0 bits (128), Expect = 1e-05, Method: Composition-based stats. Identities = 39/286 (13%), Positives = 77/286 (26%), Gaps = 33/286 (11%) Query: 8 ARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRT--QYAEPL 65 + + Y YD G LT+ TD YD+ R Sbjct: 26 TQVSTTQYAYDTVGNLTQITD---------PRGLVTTLTYDALGRRTKVQGPPATPGGAA 76 Query: 66 VESRYLYDPLGR-------RVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQND 118 + + YD R R + + S T +D T + D Sbjct: 77 PTAIFSYDGQDRVRQVTDPRSLVTAYTVDGLGNTTQQQSPDTGTTNATYDAAGNLTSRTD 136 Query: 119 RTRIQTIYQPGSFTPLIRVETATGELAKTQRR-------SLADTLQQSGGEDGGSVVFPP 171 T + + L + A+G + + L + E G + Sbjct: 137 ARGKTTTFSYDAVNRLTQASYASGTPTVLEYDGGTSPLPNDIGKLTKVIDEAGSTRFRYN 196 Query: 172 VLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGL 231 ++ + ++ +++ + G + + + Y + + Y + G Sbjct: 197 GFGNVVSKTQTTTANGVAKDQTIAYAY--GTSGSSTGHVISLTYPGSGNVVGYTYNSAGR 254 Query: 232 P--LALVSTEGATE--WCAEYDEWGNLLNEE--NPHQLQQLIRLPG 271 L L + G+ +Y +G N + L G Sbjct: 255 IAGLTLTTANGSVALLSNIQYQPFGKPSAWTWGNGTAYTRSFDLSG 300 Score = 49.8 bits (117), Expect = 2e-04, Method: Composition-based stats. Identities = 38/279 (13%), Positives = 72/279 (25%), Gaps = 52/279 (18%) Query: 17 YDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVE--------- 67 YD G LT +TD +T + YD+ +RL + ++E Sbjct: 125 YDAAGNLTSRTDAR---------GKTTTFSYDAVNRLTQASYASGTPTVLEYDGGTSPLP 175 Query: 68 ---------------SRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVT--------- 103 +R+ Y+ G V+K + +++ + Sbjct: 176 NDIGKLTKVIDEAGSTRFRYNGFGNVVSKTQTTTANGVAKDQTIAYAYGTSGSSTGHVIS 235 Query: 104 -WYGWDGDRLTTIQNDRTRI---QTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQS 159 Y G+ + N RI GS L ++ +S Sbjct: 236 LTYPGSGNVVGYTYNSAGRIAGLTLTTANGSVALLSNIQYQPFGKPSAWTWGNGTAYTRS 295 Query: 160 GGEDGGSVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPAR 219 G F P+ L+ V+ ++ +++ T + Sbjct: 296 FDLSGRLTQF-PLGATTGTGTTPNGLSRTVNYDAASRISAYTHTDTSGGTGSSTATAANQ 354 Query: 220 KIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEE 258 D + + YD GN + Sbjct: 355 TFGYDDQD-----RLISYLPANSSQSYSYDANGNRTGQT 388 Score = 42.9 bits (99), Expect = 0.026, Method: Composition-based stats. Identities = 31/217 (14%), Positives = 66/217 (30%), Gaps = 26/217 (11%) Query: 53 LVHYTRTQYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRL 112 L T+ + ++Y YD +G R + +L R+ +V + Sbjct: 16 LTLSTQVLAQTQVSTTQYAYDTVGNLTQITDPRGLVTTLTYDALGRRTKV--------QG 67 Query: 113 TTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPV 172 I+ + +V + L +T QQ + G + Sbjct: 68 PPATPGGAAPTAIFSYDGQDRVRQVTDPRSLVTAYTVDGLGNTTQQQSPDTGTTNATYDA 127 Query: 173 LVQMLDRLE-----SEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCD 227 + R + + D V+ ++ AS TV + P+ + Sbjct: 128 AGNLTSRTDARGKTTTFSYDAVNRLTQASYASGTPTVLEYDGGTSPLP-----------N 176 Query: 228 HRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQ 264 G ++ G+T Y+ +GN++++ Sbjct: 177 DIGKLTKVIDEAGST--RFRYNGFGNVVSKTQTTTAN 211 Score = 41.7 bits (96), Expect = 0.056, Method: Composition-based stats. Identities = 50/301 (16%), Positives = 79/301 (26%), Gaps = 37/301 (12%) Query: 7 IARDAHYLYRYDRHGRLTEKTDLIPEGVI------------------------RTDDERT 42 I +RY+ G + KT + Sbjct: 185 IDEAGSTRFRYNGFGNVVSKTQTTTANGVAKDQTIAYAYGTSGSSTGHVISLTYPGSGNV 244 Query: 43 HRYHYDSQHRLVHYT-RTQYAEPLVESRYLYDPLGRRVA-----KRVWRRERDLTGWMSL 96 Y Y+S R+ T T + S Y P G+ A + R DL+G ++ Sbjct: 245 VGYTYNSAGRIAGLTLTTANGSVALLSNIQYQPFGKPSAWTWGNGTAYTRSFDLSGRLTQ 304 Query: 97 SRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTL 156 T G + L+ N + + T + +T D L Sbjct: 305 FPLGATTGTGTTPNGLSRTVNYDAASRISAYTHTDTSGGTGSSTATAANQTFGYDDQDRL 364 Query: 157 QQS-GGEDGGSVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVY 215 S + + + + S R S G T Sbjct: 365 ISYLPANSSQSYSYDANGNRTGQTIGGNSYTQTIDPASNRQTVSTGPTTTTNSYDAAGSL 424 Query: 216 TPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQYD 275 T + + D RG LA V+ G T Y+ G + + + R YD Sbjct: 425 TSDGTVTYSYSD-RGR-LASVTKNGTTT-SYLYNALGQRVVKSGSNVPTGATRY---VYD 478 Query: 276 E 276 E Sbjct: 479 E 479 >UniRef50_UPI0001BC9640 YD repeat-containing protein n=1 Tax=Pseudomonas syringae pv. tabaci ATCC 11528 RepID=UPI0001BC9640 Length = 920 Score = 159 bits (401), Expect = 2e-37, Method: Composition-based stats. Identities = 79/355 (22%), Positives = 126/355 (35%), Gaps = 42/355 (11%) Query: 6 RIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPL 65 ++ YRYD ++E + V +Y YD+ RL TQ Sbjct: 460 QVGNWQT-TYRYDADSNISETATSLWGAV---------QYEYDALGRL-----TQEQTNS 504 Query: 66 VESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTI---------Q 116 V+ Y +D G + + S + Q Y D +RL ++ Sbjct: 505 VKKAYSFDATGN------RTQRTTTSLTTSYATDTQSLNYASDSNRLISVNGSTLPMDAA 558 Query: 117 NDRTRIQ-TIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQ 175 + T+I + S L V A + + GS Sbjct: 559 GNHTQINGRRFTYDSQGRLSEVYQANIYKIADYKYNALGQRIIKRAYAMGSQTVAGTTTY 618 Query: 176 MLD---RLESEILADRVSEESRR--WLASCGLTVEQMQNQMDPVY-TPARKIHLYHCDHR 229 + D +L + D +++ W + + Q+ + + K+ H DH Sbjct: 619 LYDPSGKLIGQTFYDGNGQKTSGQYWFWLDNMPLAQLTANFSALGEVSSSKLIYLHVDHL 678 Query: 230 GLPLALVSTEGATEWCAEYDEWGNLLNEENPH----QLQQLIRLPGQQYDEESGLYYNRH 285 P + A W D +G EE+ +R PGQ YD ++ L YN + Sbjct: 679 NTPRLATDSTQALLWRWNSDAYGVGSPEEDVDGDGKATTIALRFPGQIYDAQTQLSYNYY 738 Query: 286 RYYDPLQGRYITQDPIGLKGGWNFYQYP-LNPVQYIDSMGLASKYGHLNNGGYGA 339 R Y+P GRY DPIGL GG N Y Y NP+ ++D +GL + G+G+ Sbjct: 739 RDYNPDTGRYAQSDPIGLNGGLNTYGYVKGNPLSFVDPLGLETMVTVWQPVGFGS 793 Score = 48.6 bits (114), Expect = 5e-04, Method: Composition-based stats. Identities = 48/258 (18%), Positives = 80/258 (31%), Gaps = 34/258 (13%) Query: 36 RTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYLY-------DPLGRRVAKRVWRRER 88 RTD RY YD+Q L T + S Y DP G V Sbjct: 36 RTDVNDVTRYAYDAQGNLTTVTNALGQVYALASFDSYGNPQSITDPNG-----VVTTLSY 90 Query: 89 DLTGWM-SLSRKPQVTWYGWD--GDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELA 145 GW+ SL+ T Y ++ GD L D ++ Y LI V GE Sbjct: 91 TPQGWLASLTIDSSTTQYAYNEVGDLLQVTTADGNWVKYSYDDA--RRLIGVRNRLGESI 148 Query: 146 KTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVE 205 + + + + G+VV + ++ D L I ++++R+ Sbjct: 149 NYTLDPMGNRTAERTKDVNGTVVH--LQRRVFDELGRLIRVVGAGDQTQRYGYDLNDNQS 206 Query: 206 Q--------------MQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEW 251 N++ + P + + + +V G YD Sbjct: 207 SDTTPRNHKTQQAFDALNRVSKIVDPLQGVTALGYNSDDKVTKVVDPRG-VTTLYTYDSL 265 Query: 252 GNLLNEENPHQLQQLIRL 269 GN ++ ++P Sbjct: 266 GNRISSKSPDGGTSTYAY 283 Score = 45.6 bits (106), Expect = 0.004, Method: Composition-based stats. Identities = 84/452 (18%), Positives = 124/452 (27%), Gaps = 109/452 (24%) Query: 6 RIARDAHYLYRYDRHGRLTEKTDLI--------------------PEGVIRTD------- 38 R + Y YD G LT T+ + P GV+ T Sbjct: 36 RTDVNDVTRYAYDAQGNLTTVTNALGQVYALASFDSYGNPQSITDPNGVVTTLSYTPQGW 95 Query: 39 ------DERTHRYHYDSQHRLVHYTRTQY---------AEPLVESR--------YLYDPL 75 D T +Y Y+ L+ T A L+ R Y DP+ Sbjct: 96 LASLTIDSSTTQYAYNEVGDLLQVTTADGNWVKYSYDDARRLIGVRNRLGESINYTLDPM 155 Query: 76 GRRVAKRVWRRERDLTGWMS------------LSRKPQVTWYGWDGDRLTTIQNDRTRIQ 123 G R A+R + + Q YG+D L Q+ T + Sbjct: 156 GNRTAERTKDVNGTVVHLQRRVFDELGRLIRVVGAGDQTQRYGYD---LNDNQSSDTTPR 212 Query: 124 TIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESE 183 +F L RV L + + D V + +R+ S+ Sbjct: 213 NHKTQQAFDALNRVSKIVDPLQGVTALGYNSDDKVTKVVDPRGVTTLYTYDSLGNRISSK 272 Query: 184 ILADRVSEESR-------RWLASCGLTVEQMQNQMDPV------YTPARKIHLYHCDH-- 228 S + R + G+ E + ++ + TPA I + D Sbjct: 273 SPDGGTSTYAYDEANNLIRSTDARGVVTEYAYDALNRLTSKSYPATPALNIKFLY-DQTA 331 Query: 229 -----RGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEESGLYYN 283 G L + G YD GNL+ + + SG YY Sbjct: 332 DGNLGIGHLTGLQDSAGVLT--YTYDAKGNLVRQHRSVGVN-------------SGDYYE 376 Query: 284 RHRY-YDPLQGRYITQDPIGLKGGWNFYQYPLNPVQYIDSMGLASKYGHLNNGGYGARPN 342 Y YD R + Q IG N Y N + G+ G+ Sbjct: 377 TLNYGYD--AARNLVQ--IGYPSSINL-TYTRNSAAQV--TGVKLAIGNKTATLASNISY 429 Query: 343 KPPTPDPSKLPDIAKQLRLPYPIDQASSAPNV 374 +P P S L Y D + V Sbjct: 430 QPFGPVNSLTWGNGILLSRTYDQDYQLTQQQV 461 Score = 44.8 bits (104), Expect = 0.007, Method: Composition-based stats. Identities = 47/301 (15%), Positives = 86/301 (28%), Gaps = 45/301 (14%) Query: 10 DAHYLYRYDRHGRLTE-------KTDLIPEGVIRTDD-----ERTHRYHYDSQHRLVHYT 57 D Y YD + + KT + + R + Y+S ++ Sbjct: 192 DQTQRYGYDLNDNQSSDTTPRNHKTQQAFDALNRVSKIVDPLQGVTALGYNSDDKVTKVV 251 Query: 58 RTQYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSR-------KPQVTWYGWDG- 109 + L Y YD LG R++ + + + + VT Y +D Sbjct: 252 DPRGVTTL----YTYDSLGNRISSKSPDGGTSTYAYDEANNLIRSTDARGVVTEYAYDAL 307 Query: 110 DRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVV- 168 +RLT+ T I F + G T + A L + G V Sbjct: 308 NRLTSKSYPATPALNI----KFLYDQTADGNLGIGHLTGLQDSAGVLTYTYDAKGNLVRQ 363 Query: 169 FPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDH 228 V V D E+ + + + + +N V Sbjct: 364 HRSVGVNSGDYYETLNYGYDAARNLVQIGYPSSINLTYTRNSAAQVT------------- 410 Query: 229 RGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRL--PGQQYDEESGLYYNRHR 286 G+ LA+ + Y +G + + + + Q ++ G + +R Sbjct: 411 -GVKLAIGNKTATLASNISYQPFGPVNSLTWGNGILLSRTYDQDYQLTQQQVGNWQTTYR 469 Query: 287 Y 287 Y Sbjct: 470 Y 470 >UniRef50_A9GT29 Insecticidal toxin complex-like protein n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=A9GT29_SORC5 Length = 2426 Score = 159 bits (401), Expect = 2e-37, Method: Composition-based stats. Identities = 88/430 (20%), Positives = 136/430 (31%), Gaps = 74/430 (17%) Query: 11 AHYLYRYDRHGRLTEKTDLIPEGVI--RTDDERTHRYHYDSQHRLVHYTRTQYAEPLV-- 66 + Y YD G + E D + V +Y YD+ +RL+ T ++A L Sbjct: 1782 QNLTYTYDPVGNIVEINDSAQQTVFFNNAVVSPNAQYVYDAVYRLIEATGREHAGGLADV 1841 Query: 67 ------------------------ESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQV 102 +Y YD +G +R L G + R+ Sbjct: 1842 QRDQNDLPIQALPHANDTQALRNYTEQYFYDAVGN------IQRMEHLAGAGTWIRR--- 1892 Query: 103 TWYGWDGDRLTTIQNDRTRIQTIYQPGS--FTPLIRVETATGELAKTQRRSLADTLQQSG 160 Y +RL + D +P S + D L+ + Sbjct: 1893 YSYEMTSNRLKSTFGDPED-----EPSSPMYPHDAHGNMTAMPHIAALTWDENDQLRSTD 1947 Query: 161 GEDGGSVVFPPVL-------VQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDP 213 + GG V + V L E + E R+ A+ + Q + MD Sbjct: 1948 LDGGGVVYYAYDATGQRVRKVWEHSGLVEERIYLGGYEVYRKRNATGLVLERQTLHVMDG 2007 Query: 214 V----------------YTPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLL-- 255 +T ++ +H G V G EY +G Sbjct: 2008 ARRAAMVETKTVDTSGPFTVTPRVRYQLDNHLGSASLEVDGAGLVIGYEEYHPFGTTAYW 2067 Query: 256 -NEENPHQLQQLIRLPGQQYDEESGLYYNRHRYYDPLQGRYITQDPIGLKGGWNFYQYPL 314 Q+ R G++ DEE+GLYY+ RYY P GR+ DP G+ G N Y Y Sbjct: 2068 SAASGIEVSQRRYRYTGKEKDEETGLYYHGARYYAPWLGRWTAADPAGMVDGPNLYMYVS 2127 Query: 315 N-PVQYIDSMGLASKYGHLNNGG--YGARPNKPPT-PDPSKLPDIAKQLRLPYPIDQASS 370 P+ D G K G N + RP +P P P+ L + ++ + Sbjct: 2128 GRPITLTDPSGAQGKSGDDNQQQHSHDTRPKQPRRSPPPASLKEAIEKFEDVKISEPKDL 2187 Query: 371 APNVFKTFFR 380 P + F Sbjct: 2188 TPEERELIFG 2197 Score = 42.9 bits (99), Expect = 0.029, Method: Composition-based stats. Identities = 39/253 (15%), Positives = 66/253 (26%), Gaps = 38/253 (15%) Query: 17 YDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQH----RLVHYTRTQYAEPLVESRYLY 72 YD G+ I + + Y YD RL TR+ L Y Y Sbjct: 1739 YDAKGQRER---------IVYGNGTSTVYTYDPLTFKLARL-RTTRSSDGAVLQNLTYTY 1788 Query: 73 DPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGD-RLTTIQNDRTRIQTIYQPGSF 131 DP+G V ++ +S Q Y +D RL Sbjct: 1789 DPVGNIVEINDSAQQTVFFNNAVVSPNAQ---YVYDAVYRLIEATGREHAGGLA------ 1839 Query: 132 TPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSE 191 ++ + + + L+ + V ++ L + I Sbjct: 1840 --DVQRDQNDLPIQALPHANDTQALRNYTEQYFYDAVGNIQRMEHLAGAGTWIRRYSYEM 1897 Query: 192 ESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYH--------CDHRGLPLALVSTEGATE 243 S R ++ G ++ + M P + H D +G Sbjct: 1898 TSNRLKSTFGDPEDEPSSPMYPHDAHGNMTAMPHIAALTWDENDQLRS----TDLDGGGV 1953 Query: 244 WCAEYDEWGNLLN 256 YD G + Sbjct: 1954 VYYAYDATGQRVR 1966 >UniRef50_B4SL73 YD repeat protein n=4 Tax=Stenotrophomonas maltophilia RepID=B4SL73_STRM5 Length = 1577 Score = 159 bits (401), Expect = 2e-37, Method: Composition-based stats. Identities = 74/323 (22%), Positives = 116/323 (35%), Gaps = 30/323 (9%) Query: 15 YRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYLYDP 74 Y YD G +TE + V+ Y YD+ RL P+ Y YD Sbjct: 1141 YGYDPVGSITELKNGTGSTVLAK-------YAYDALGRLTQTQDGATGTPI--ETYAYDA 1191 Query: 75 LGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQPGSFTPL 134 G R A T + R V + D + + + IY + Sbjct: 1192 TGNRTALTTSAGTASYTYPATSHRLTAVDGEARNHDAVGNTTSIGGK-TFIYNDANRMNA 1250 Query: 135 IRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSEESR 194 ++ A E R +GG ++ + A +++ Sbjct: 1251 VKQGNAVLESYAYNHRGERVLRTPAGGAAQITLYNEA------GQWLGNYSATGQAQQQA 1304 Query: 195 RWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATE---WCAEYDEW 251 WL + + + + + P ++ DH G P ++ W + + + Sbjct: 1305 IWLDNYPVALISVPSAGVP------ELAYIQPDHLGTPRVVIDPARDVAIWEWSNKSEVF 1358 Query: 252 GNLLNEENPH----QLQQLIRLPGQQYDEESGLYYNRHRYYDPLQGRYITQDPIGLKGGW 307 GN + +P + +R PGQQ + SGL+YN R YDP GRY DPIGL GG Sbjct: 1359 GNQIPSTDPDGDGVAFELALRFPGQQATDASGLFYNYRREYDPAVGRYTQSDPIGLMGGL 1418 Query: 308 NFYQYP-LNPVQYIDSMGLASKY 329 N + Y +P +D +GLA K Sbjct: 1419 NSFAYGSGDPTGRVDPLGLADKK 1441 Score = 61.4 bits (147), Expect = 7e-08, Method: Composition-based stats. Identities = 45/279 (16%), Positives = 73/279 (26%), Gaps = 36/279 (12%) Query: 12 HYLYRYDRHGRLTEKTDLIPEGVIRTDD------------ERTHRYHYDSQHRLVHYTRT 59 H Y Y+ G LT + T D T YHYD+ +RL+ Sbjct: 926 HTTYAYNGFGDLTGQVSPDSGASSYTVDAAGNRKAATDARGVTATYHYDALNRLIGVAYP 985 Query: 60 QYAEPLVESRYLYD------PLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLT 113 P ++ Y YD R AK + G +G ++ Sbjct: 986 D---PNLDVGYSYDVAPAACAADERFAKGRLGQVLHANGSTQYCH----DRFGQVTRKVQ 1038 Query: 114 TIQNDRTRIQTIYQ-PGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPV 172 T+ + ++ Y G T L T R + + Q G G V Sbjct: 1039 TVNGVASTLRYAYSKSGRLTAL----TYPDGSVADYVRDIQGRISQIGLTRPGQARQIVV 1094 Query: 173 LVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLP 232 + + + + + + Y D G Sbjct: 1095 NNVSYAAFGPATGWTYGNGRQLQRPLDLDYRPQAVHDPAADGLSLG-----YGYDPVGSI 1149 Query: 233 LALVSTEGATE-WCAEYDEWGNLLNEENPHQLQQLIRLP 270 L + G+T YD G L ++ + Sbjct: 1150 TELKNGTGSTVLAKYAYDALGRLTQTQDGATGTPIETYA 1188 Score = 45.2 bits (105), Expect = 0.006, Method: Composition-based stats. Identities = 51/301 (16%), Positives = 83/301 (27%), Gaps = 64/301 (21%) Query: 7 IARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLV 66 + + Y +DR G++T K + T RY Y RL T + Sbjct: 1017 LHANGSTQYCHDRFGQVTRKVQTVN------GVASTLRYAYSKSGRLTALTYPDGS---- 1066 Query: 67 ESRYLYDPLGR-------RVAKRV-------------------WRRERDLTGWMSLSRKP 100 + Y+ D GR R + + R L + L +P Sbjct: 1067 VADYVRDIQGRISQIGLTRPGQARQIVVNNVSYAAFGPATGWTYGNGRQLQRPLDLDYRP 1126 Query: 101 QVTW----------YGWDGDRLTTIQNDRTRIQTI--YQPGSFTPLIRV-ETATGELAKT 147 Q YG+D T + T + Y + L + + ATG +T Sbjct: 1127 QAVHDPAADGLSLGYGYDPVGSITELKNGTGSTVLAKYAYDALGRLTQTQDGATGTPIET 1186 Query: 148 QRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQM 207 G + P L ++ E + + Sbjct: 1187 YAYDATGNRTALTTSAGTASYTYPATSHRLTAVDGEARNHDAVGNTTS--IGGKTFIYND 1244 Query: 208 QNQMDPVYTPARKIHLYHCDHRG-----LP------LALVSTEGATEWCAEYDEWGNLLN 256 N+M+ V + Y +HRG P + L + G W Y G Sbjct: 1245 ANRMNAVKQGNAVLESYAYNHRGERVLRTPAGGAAQITLYNEAGQ--WLGNYSATGQAQQ 1302 Query: 257 E 257 + Sbjct: 1303 Q 1303 Score = 44.0 bits (102), Expect = 0.012, Method: Composition-based stats. Identities = 47/284 (16%), Positives = 82/284 (28%), Gaps = 48/284 (16%) Query: 33 GVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYL-------YDPLGRRVAKRVW- 84 G+ D R + YDS R++ A+ V Y D LGR+ + Sbjct: 468 GITAEDGRRYSTFTYDSDGRVISSQHAGGADG-VTLAYSPNGGAVVTDALGRQTDYTLTP 526 Query: 85 ----RRERDLTGWMSLSRKPQVTWYGWDGD---RL-TTIQNDRTRIQTIYQPGSFTPLIR 136 R +TG T+Y D RL T + + Y G+ R Sbjct: 527 GGDTAPSRKVTGLTDSQGTVSRTYYDQSVDFRRRLDTYTDRRGIQTKHTYAQGTDPVSGR 586 Query: 137 ----------VETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILA 186 V + T R + + + + + Q ++I + Sbjct: 587 AVSIHTVTEAVGLPEQRVVTTARDVETNAVLTTRIGNRETRTSFNTRRQPTTNTVTDIAS 646 Query: 187 DRVSEESRRW------LASCGLTVEQMQNQMDPVYTP---ARKIHLYHCDHRG------- 230 + S + A+ VE + +D T A Y D G Sbjct: 647 GQTRITSYTYCEAADVAAAGSCPVEGLLKSVDGPRTDVVDAVTYAYYPADDAGCAANGAC 706 Query: 231 -----LPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRL 269 ++ + G T YD +G L+ ++ + + Sbjct: 707 SYRKGDLRSVTNALGQTVETLAYDAFGRPLSVKDANGVVTDYTY 750 Score = 42.9 bits (99), Expect = 0.026, Method: Composition-based stats. Identities = 33/228 (14%), Positives = 63/228 (27%), Gaps = 35/228 (15%) Query: 38 DDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYLYDPLGRRVAK--------------RV 83 D + Y YD+ RL Y D G R+ + R Sbjct: 788 PDGSSVSYVYDAALRLTDIEDNAGN----TIHYTLDNAGNRLKEDTLDTGGTLRRTLART 843 Query: 84 WRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGE 143 + LT Y +G+ L T+ + R+ + + PL R+ + Sbjct: 844 FNTLGQLTALKDAGNHATGFAYDANGN-LQTVTDALQRVTS----QQYDPLNRLAQTLQD 898 Query: 144 LAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLT 203 + A+ Q D + V P L + + + + + G + Sbjct: 899 VGGV----AAEIRSQYNALDQVTQVTDP------KGLHTTYAYNGFGDLTGQVSPDSGAS 948 Query: 204 VEQMQNQMDPVYTPARK--IHLYHCDHRGLPLALVSTEGATEWCAEYD 249 + + + YH D + + + + YD Sbjct: 949 SYTVDAAGNRKAATDARGVTATYHYDALNRLIGVAYPDPNLDVGYSYD 996 >UniRef50_Q466C0 Putative uncharacterized protein n=1 Tax=Methanosarcina barkeri str. Fusaro RepID=Q466C0_METBF Length = 2096 Score = 158 bits (399), Expect = 4e-37, Method: Composition-based stats. Identities = 69/339 (20%), Positives = 109/339 (32%), Gaps = 27/339 (7%) Query: 5 NRIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDER------THRYHYDSQHRLVHYTR 58 N + Y Y D G + + + EGV D E T Y YD +RL Sbjct: 1590 NTTQVVSSYKYTLDAAGNRLKVDEQLAEGVESGDSELKESQLLTTTYGYDKLYRLTKVDY 1649 Query: 59 TQYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQV-----TWYGWDGDRLT 113 Y YD +G R++ T Q+ Y +D Sbjct: 1650 PSN----KTVSYKYDSMGNRISMTTNVDGIGSTISYKYDAADQLLQSGNISYSYDKKGNL 1705 Query: 114 TIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVL 173 + + Y L V + + + DG ++ + Sbjct: 1706 IKKRVNSTQFMSYSYDEANRLKNV-----SEFVSNTNTPKSSYNFEYDGDGNRIIKTTIN 1760 Query: 174 VQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPL 233 + + + + + + T + + + YH D G Sbjct: 1761 GENAQSTKYVLDINSALPQVLTESDTKNTTCYTYGTDLISMTNSENAEYYYHYDGLGSVR 1820 Query: 234 ALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEESGLYYNRHRYYDPLQG 293 +L ++G + YD +G + E + R G+Q D+E+GL Y R RYYDP G Sbjct: 1821 SLSDSKGIIKNTYLYDAFGQVQKEIGT--VDNEFRFTGEQMDDETGLIYLRARYYDPSVG 1878 Query: 294 RYITQDPIG----LKGGWNFYQY-PLNPVQYIDSMGLAS 327 R+IT+D I N Y Y NPV +D G Sbjct: 1879 RFITKDVIKGRRVTTQSINRYVYTTNNPVNLVDLTGYCG 1917 Score = 86.0 bits (211), Expect = 3e-15, Method: Composition-based stats. Identities = 47/283 (16%), Positives = 94/283 (33%), Gaps = 42/283 (14%) Query: 8 ARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDD------------ERTHRYHYDSQHRLVH 55 A+ Y ++YD L TD + + D R +Y YDS ++LV Sbjct: 1065 AKGNRYTFQYDALDNLLSITDPMGQTTSNKYDAAGNKISFTDAEGRLTKYSYDSLNQLVK 1124 Query: 56 YTRTQYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTW---------YG 106 T RY YD +G V+ + + + L+R+ VT Y Sbjct: 1125 VTNAMGG----VVRYKYDAVGNLVSTTDAKGHKTSYDYDPLNRQVSVTNALGKTTRNKYD 1180 Query: 107 WDGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGS 166 G++++ + Y S L++V A G++ + L + E+G Sbjct: 1181 AIGNKISITNAYGKSTRYSY--NSLNQLVKVTNAMGKVVR-YNYDAVGNLISTTDENGHK 1237 Query: 167 VVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHC 226 + + + + D + + +R + G + + Y + + Sbjct: 1238 INYGYDSLNR-----QVSVTDALRKTTRNKYDAVGNKI-----SITNAYGKSTRYSYNSL 1287 Query: 227 DHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRL 269 + + + G YD GNL++ + + + Sbjct: 1288 NQL---VKVTDAMGGVV-RYNYDAVGNLISTTDANGRKTNYGY 1326 Score = 84.9 bits (208), Expect = 6e-15, Method: Composition-based stats. Identities = 56/338 (16%), Positives = 108/338 (31%), Gaps = 62/338 (18%) Query: 15 YRYDRHGRLTEKTDLIPEGVIRTDD------------ERTHRYHYDSQHRLVHYTRTQYA 62 Y YD R T+ + + D ++ RY Y+S ++LV T Sbjct: 1156 YDYDPLNRQVSVTNALGKTTRNKYDAIGNKISITNAYGKSTRYSYNSLNQLVKVTNAMG- 1214 Query: 63 EPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVT---------WYGWDGDRLT 113 RY YD +G ++ + G+ SL+R+ VT Y G++++ Sbjct: 1215 ---KVVRYNYDAVGNLISTTDENGHKINYGYDSLNRQVSVTDALRKTTRNKYDAVGNKIS 1271 Query: 114 TIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVL 173 + Y S L++V A G + + ++ + + + +G + Sbjct: 1272 ITNAYGKSTRYSY--NSLNQLVKVTDAMGGVVRYNYDAVGNLISTTDA-NGRKTNYGYDS 1328 Query: 174 VQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPL 233 + + + + + +R + G + ++ Y D + Sbjct: 1329 LNRQVSI-----TNALGKTTRNKYDAVGNKISSTD--------ANWRLTKYSYDSLNRLV 1375 Query: 234 ALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEESGLYYNRHRYYDPLQG 293 + G YD GNL++ + + YD L Sbjct: 1376 KVTDAMGGVV-RYTYDAVGNLISTTDAKGHKTDYG-------------------YDSLDR 1415 Query: 294 RYITQDPIGLKGGWNFYQYPLNPVQYIDSMGLASKYGH 331 + DP+G N Y N + D G + YG+ Sbjct: 1416 QVSITDPLGRTA-RNKYDAVGNKISSTDEDGKTTSYGY 1452 Score = 80.2 bits (196), Expect = 2e-13, Method: Composition-based stats. Identities = 50/276 (18%), Positives = 90/276 (32%), Gaps = 43/276 (15%) Query: 15 YRYDRHGRLTEKTDLIPEGVIRTDDE------------RTHRYHYDSQHRLVHYTRTQYA 62 Y YD R T+ + + D R +Y YDS +RLV T Sbjct: 1324 YGYDSLNRQVSITNALGKTTRNKYDAVGNKISSTDANWRLTKYSYDSLNRLVKVTDAMGG 1383 Query: 63 EPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVT---------WYGWDGDRLT 113 RY YD +G ++ + + G+ SL R+ +T Y G++++ Sbjct: 1384 ----VVRYTYDAVGNLISTTDAKGHKTDYGYDSLDRQVSITDPLGRTARNKYDAVGNKIS 1439 Query: 114 TIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVL 173 + D Y L +V + ++ + L + + Sbjct: 1440 STDEDGKTTSYGYDV--LNRLTKVSYPDDQKVSYNYDAVGNRLTMKDSHGTTAYKYDK-- 1495 Query: 174 VQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPL 233 L+RL S + D T ++ N++ Y P K Y D + Sbjct: 1496 ---LNRLLSVLNPDGQ---------KVSYTYNKVGNRVKMTY-PDGKTTSYSYDAVNRLI 1542 Query: 234 ALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRL 269 ++ ++G Y + GNL P+ ++ Sbjct: 1543 GVIDSDGHIT-SYSYAKNGNLKTMNTPNGVKTEYSY 1577 Score = 74.5 bits (181), Expect = 8e-12, Method: Composition-based stats. Identities = 51/281 (18%), Positives = 93/281 (33%), Gaps = 32/281 (11%) Query: 15 YRYDRHGRLTEKTDLIPEGVIRTDD------------ERTHRYHYDSQHRLVHYTRTQYA 62 Y YD R TD + + D ++ RY Y+S ++LV T Sbjct: 1240 YGYDSLNRQVSVTDALRKTTRNKYDAVGNKISITNAYGKSTRYSYNSLNQLVKVTDAMGG 1299 Query: 63 EPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRK-------PQVTWYGWDGDRLTTI 115 RY YD +G ++ + G+ SL+R+ + T +D Sbjct: 1300 ----VVRYNYDAVGNLISTTDANGRKTNYGYDSLNRQVSITNALGKTTRNKYDAVGNKIS 1355 Query: 116 QNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGS-VVFPPVLV 174 D T Y S L++V A G + + ++ + + + + + + + Sbjct: 1356 STDANWRLTKYSYDSLNRLVKVTDAMGGVVRYTYDAVGNLISTTDAKGHKTDYGYDSLDR 1415 Query: 175 QMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMD------PVYTPARKIHLYHCDH 228 Q+ A + ++S + D V P + Y+ D Sbjct: 1416 QVSITDPLGRTARNKYDAVGNKISSTDEDGKTTSYGYDVLNRLTKVSYPDDQKVSYNYDA 1475 Query: 229 RGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRL 269 G L + + G T +YD+ LL+ NP + Sbjct: 1476 VGNRLTMKDSHGTTA--YKYDKLNRLLSVLNPDGQKVSYTY 1514 Score = 57.1 bits (136), Expect = 1e-06, Method: Composition-based stats. Identities = 41/273 (15%), Positives = 79/273 (28%), Gaps = 40/273 (14%) Query: 11 AHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRY 70 A Y + YD R T +TD + + DE + ++L Y Sbjct: 879 ATYTFNYDSENRKTTETDPFGKNKTYSFDEHFWEL--NETNQL-----------GYTISY 925 Query: 71 LYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTW-------YGWDGDRLTTIQNDRTRIQ 123 YD G R++ + + + + T +D Q D R + Sbjct: 926 AYDENGNRISVTNENSKTTKLAYDANGNIIKTTNPLGYSKSMTYDSKNNLISQTDELRHK 985 Query: 124 TIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESE 183 T ++ + LI+ A G + ++ + + Sbjct: 986 TSFEYDDNSNLIKSIDALGHETVFSYDKYGQVIGETDSNKKTATFSYNNNGDQI------ 1039 Query: 184 ILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATE 243 + D + S + G + + + + + D L++ G T Sbjct: 1040 TITDANGKTSAFTYDTVGRVTTKTDAKGNR--------YTFQYDALDNLLSITDPMGQTT 1091 Query: 244 WCAEYDEWGNLLNEENPHQLQQLIRLPGQQYDE 276 +YD GN ++ + RL YD Sbjct: 1092 -SNKYDAAGNKISFTDAEG-----RLTKYSYDS 1118 Score = 55.6 bits (132), Expect = 4e-06, Method: Composition-based stats. Identities = 51/337 (15%), Positives = 89/337 (26%), Gaps = 55/337 (16%) Query: 13 YLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYLY 72 + Y YD G L + + Y YD H + T + P+ + Y Sbjct: 817 WSYSYDDQGNLIQ---------CKNPIGGKLSYTYDENHWMTSITDPRGNHPMKNT---Y 864 Query: 73 DPLGRRVAKRVWRRERDLTGWMSLSR---------KPQVTWYGWDGDRLTTIQNDRTRIQ 123 D G +++ + S +R K + + L I Sbjct: 865 DEKGHVISQSNSLNATYTFNYDSENRKTTETDPFGKNKTYSFDEHFWELNETNQLGYTIS 924 Query: 124 TIYQPGSFTPLIRVETATGELAKTQ-RRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLES 182 Y R+ T+ + ++ G S L Sbjct: 925 YAYDENGN----RISVTNENSKTTKLAYDANGNIIKTTNPLGYSKSMTYDSKNNLISQTD 980 Query: 183 EILADRVSEESRRW--------LASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLA 234 E+ E L + Q+ +K + ++ G + Sbjct: 981 ELRHKTSFEYDDNSNLIKSIDALGHETVFSYDKYGQVIGETDSNKKTATFSYNNNGDQIT 1040 Query: 235 LVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEESGLYYNRHRYYDPLQGR 294 + G T YD G + + + R Q YD L Sbjct: 1041 ITDANGKT-SAFTYDTVGRVTTKTDAKG----NRYTFQ---------------YDALDNL 1080 Query: 295 YITQDPIGLKGGWNFYQYPLNPVQYIDSMGLASKYGH 331 DP+G + N Y N + + D+ G +KY + Sbjct: 1081 LSITDPMG-QTTSNKYDAAGNKISFTDAEGRLTKYSY 1116 >UniRef50_A9FBB8 Conserved carbohydrate-binding protein, Rhs family n=2 Tax=Sorangium cellulosum 'So ce 56' RepID=A9FBB8_SORC5 Length = 3149 Score = 158 bits (399), Expect = 5e-37, Method: Composition-based stats. Identities = 69/364 (18%), Positives = 122/364 (33%), Gaps = 45/364 (12%) Query: 8 ARDAHYLYRYDRHGRLTEKTDLIP----EGVIRTDDERTHRYHYDSQHRLVHYTRTQYAE 63 YRYD G + E + +P G R+ YD ++L + Sbjct: 2417 RPFQRLRYRYDLVGNIRELNNEVPFDESLGGAVMVARTQQRFAYDDLNQLTEASGIYQER 2476 Query: 64 PLVESRYL----YDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDR 119 + RY YD LG AKR + G + + + + D T Sbjct: 2477 GNEQQRYTLGVDYDVLGNATAKRQEVAQYGRVGGNNWQMQYPIRERTYRNDYRYTGPRPH 2536 Query: 120 TRIQTI-YQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLD 178 Q Y P P +R Q + + + ++ +V Q + Sbjct: 2537 AANQVDEYVPAESQPRLRELFYDANGNHKQWKYRGNLQRTLSWDEDNRLVSVSENGQEMS 2596 Query: 179 RLESEILADR-------VSEESRRWLASCGLT-------------VEQMQNQMDPVYTPA 218 R + +R EE ++ + ++ +++D Y Sbjct: 2597 RALYDGAGERRVHLHRVAGEEETAYVDQHLVVRNGVIATKHLFAGETRIASKIDADYYQR 2656 Query: 219 RKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQ--LIRLPGQQYDE 276 + YH DH G + + A EY G L ++ + Q G++ D Sbjct: 2657 PPVLYYHPDHLGSTQYVTDQDQALSQHVEYLPSGELWADQTDSRYQNRQPYLFTGKELDL 2716 Query: 277 ESGLYYNRHRYYDPLQGRYITQDPI---GLKGGWN----------FYQYP-LNPVQYIDS 322 +GLY+ R Y+P G +++ DPI ++G N Y Y NP++++D Sbjct: 2717 STGLYHYGARSYEPRLGVWMSPDPILDQYMRGAPNGGVYEPIHLGLYTYTRNNPLRFVDP 2776 Query: 323 MGLA 326 G++ Sbjct: 2777 TGMS 2780 Score = 59.0 bits (141), Expect = 3e-07, Method: Composition-based stats. Identities = 55/291 (18%), Positives = 94/291 (32%), Gaps = 45/291 (15%) Query: 10 DAHYLYRYDRHGRLTEKTDLIPEGVI--RTDDERTHRYHYDSQHRLVHYTRTQYAEPLVE 67 +RYDR G E T P R + T +Y +D+ R+ E +V Sbjct: 2272 AGKRSFRYDRFGNTAELTSEFPRLREPHRGPYQATMKYVFDALGRMQELHFPGSGEEIV- 2330 Query: 68 SRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWD--GDRLTTIQNDRTRIQTI 125 RY YD G V+ + + + G+D G R+ + + + Sbjct: 2331 -RYGYDRGGAVVSVVGENQRVNPQHPSEPRTTEYLRHIGYDEFGQRVRVVAGNGIETKYR 2389 Query: 126 YQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEIL 185 Y + R+ + Q RS+ + + + + LV + L +E+ Sbjct: 2390 YDEST----RRMTEVNADHQSAQMRSMGRSPR-----PFQRLRYRYDLVGNIRELNNEVP 2440 Query: 186 ADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWC 245 D S G V + Q Y ++ + G + G + Sbjct: 2441 FDE----------SLGGAVMVARTQQRFAYDDLNQL----TEASG----IYQERGNEQQR 2482 Query: 246 A----EYDEWGNLLNEENPHQLQQLIRLPG-----QQYDEESGLYYNRHRY 287 +YD GN + ++ Q R+ G Q E Y N +RY Sbjct: 2483 YTLGVDYDVLGNATAKR--QEVAQYGRVGGNNWQMQYPIRER-TYRNDYRY 2530 Score = 46.3 bits (108), Expect = 0.002, Method: Composition-based stats. Identities = 53/269 (19%), Positives = 77/269 (28%), Gaps = 21/269 (7%) Query: 7 IARDAHYLYRYDR---HGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYT---RTQ 60 + A +D GRL L E VI + + + Y D R+ R Q Sbjct: 2096 LDGYARTAIEHDLVALEGRL-----LFQEMVIDANAKMRNTYR-DVGGRIAAVEEFNRIQ 2149 Query: 61 YAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQN--D 118 E + +RY + PLG V R + S+ R VT D R + Sbjct: 2150 GVETRIVTRYQHSPLGELVRVTDARNNATTATYDSVGRM--VTLVSPDAGRTEWRYDLVG 2207 Query: 119 RTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLD 178 R + + + LIR E L K D + G D Sbjct: 2208 NLRAKQTAELAAQGQLIRYEYDFNRLRKIDYPVTQDVVYTYGEPDDA----GDEQGNRAA 2263 Query: 179 RLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLAL-VS 237 RL E A + + +P P + Y D G L Sbjct: 2264 RLVEETSAAGKRSFRYDRFGNTAELTSEFPRLREPHRGPYQATMKYVFDALGRMQELHFP 2323 Query: 238 TEGATEWCAEYDEWGNLLNEENPHQLQQL 266 G YD G +++ +Q Sbjct: 2324 GSGEEIVRYGYDRGGAVVSVVGENQRVNP 2352 >UniRef50_B1HKQ3 Rhs family protein n=1 Tax=Burkholderia pseudomallei S13 RepID=B1HKQ3_BURPS Length = 1749 Score = 158 bits (399), Expect = 5e-37, Method: Composition-based stats. Identities = 78/353 (22%), Positives = 118/353 (33%), Gaps = 40/353 (11%) Query: 11 AHYLYRYDRHGRLTEKTDLIP--EGVIRTDDERTH---------RYHYDSQHRLVHYTRT 59 A Y +D RLT T + D+ RT Y YD+ L T T Sbjct: 1301 ATANYTFDNANRLTAITQGSETVQLAYDADNHRTTLTLPNGIAVNYGYDNASELTGLTYT 1360 Query: 60 QYAEP-LVESRYLYDPLGRRVAKR----VWRRERDLTGWMSLSRKPQVTWYGWDGDRLTT 114 Q L Y YD GR + K T + + T + R Sbjct: 1361 QGNGTALGNLAYAYDADGRIIQKSGIFATDVLPTATTQPATFDLNDRKTSFNGQALRYDA 1420 Query: 115 IQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVF--PPV 172 N + Y + L ++ + +L + ++ + ++ Sbjct: 1421 NGNLTSDGTNTYTWDARNQLTQISQGSNVQLSFSYDALGRRIGKTVQGNTTQFLYDNNNA 1480 Query: 173 LVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLP 232 + +M + IL +E G T + D G Sbjct: 1481 VQEMQGTTINPILVGLGVDERFARGDVTGRT-------------------YFLTDSLGST 1521 Query: 233 LALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEESGLYYNRHRYYDPLQ 292 +AL + GA YD +GN ++ + G++ D GLYYNR RYY PL Sbjct: 1522 IALTDSAGAIRQRYSYDPYGNTEQSDSTTGFTNPYQYTGREMDAA-GLYYNRARYYSPLM 1580 Query: 293 GRYITQDPIGLKGG-WNFYQYP-LNPVQYIDSMGLASKYGHLNNGGYGARPNK 343 +I++DPI GG +FY Y +PV + D +GL S N G N Sbjct: 1581 SGFISEDPITFGGGQLSFYGYSDSDPVNHTDRLGLFSLTRTFANAAGGVFCNY 1633 Score = 64.1 bits (154), Expect = 1e-08, Method: Composition-based stats. Identities = 39/245 (15%), Positives = 75/245 (30%), Gaps = 53/245 (21%) Query: 4 DNRIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAE 63 ++R RYD +G LT + T+ Y +D++++L ++ Sbjct: 1405 NDRKTSFNGQALRYDANGNLTS--------------DGTNTYTWDARNQLTQISQ----G 1446 Query: 64 PLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQ 123 V+ + YD LGRR+ K V + T + +D + T Sbjct: 1447 SNVQLSFSYDALGRRIGKTV---------------QGNTTQFLYDNNNAVQEMQGTTINP 1491 Query: 124 TIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESE 183 + G R + T SL T+ + + ++ +S Sbjct: 1492 ILVGLGVDERFARGDVTGRTYFLTD--SLGSTIALTDSAGAIRQRYSYDPYGNTEQSDST 1549 Query: 184 ILADRVSEESRRWLASCGLTVEQMQN---------QMDPVYTPARKIHLY---------H 225 + + R + + GL + + DP+ ++ Y H Sbjct: 1550 TGFTNPYQYTGREMDAAGLYYNRARYYSPLMSGFISEDPITFGGGQLSFYGYSDSDPVNH 1609 Query: 226 CDHRG 230 D G Sbjct: 1610 TDRLG 1614 Score = 59.0 bits (141), Expect = 4e-07, Method: Composition-based stats. Identities = 36/261 (13%), Positives = 78/261 (29%), Gaps = 27/261 (10%) Query: 17 YDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYLYDPLG 76 YD +G + ++ + +Y YDS++RL+ T + YD +G Sbjct: 1161 YDGNGNIL---------TVKLPNSGVIQYTYDSRNRLITRTDAMNQS----ESWTYDGMG 1207 Query: 77 RRVAKRVWRRERDLTGWMSLSRKPQVTWYG-------WD-GDRLTTIQNDRTRIQTIYQP 128 + + + + +L+R+ V++ +D G+RLT++ D T + Sbjct: 1208 HVLTHTDRKGQVTNISYDALNRRSLVSYADGSGIQASYDAGNRLTSVI-DSTSGTLSWDY 1266 Query: 129 GSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADR 188 + T G ++ T + T + + + F SE + Sbjct: 1267 DGLDHVTSTSTPQGNVSSTYDAAGRRTSMTAAAQATANYTFDNANRLTAITQGSETVQLA 1326 Query: 189 VSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWCAEY 248 ++ R + + + + G +G + Sbjct: 1327 YDADNHRTTLTLPNGIAVNYGYDNASELTGLTYTQGNGTALGNLAYAYDADGRIIQKS-- 1384 Query: 249 DEWGNLLNEENPHQLQQLIRL 269 G + P Q Sbjct: 1385 ---GIFATDVLPTATTQPATF 1402 Score = 52.1 bits (123), Expect = 4e-05, Method: Composition-based stats. Identities = 45/255 (17%), Positives = 73/255 (28%), Gaps = 25/255 (9%) Query: 4 DNRIARDAHYL-----YRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTR 58 NRIA Y YD G L T D T +Y YD+ HR++ Sbjct: 857 GNRIASVTDNSGRTVGYVYDSAGTLATVT---------YPDNTTEQYTYDTNHRML---T 904 Query: 59 TQYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKP---QVTWYGWDGDRLTTI 115 Q V YD G RVAK+ + + + T +G++ Sbjct: 905 MQDRRGHVWVTNQYDANG-RVAKQTYADNTSYQFAYTTNSNNVVTATTVTDPNGNKEQVA 963 Query: 116 QNDRTRIQTIYQPGSFTPLIRVETATGELA--KTQRRSLADTLQQSGGEDGGSVVFPPVL 173 + + + T L + T E + + + G+V L Sbjct: 964 FDPISSYPSSDTYAYGTSLAQTTTYVREPSGLVDSQTDALGRTTAYIYDALGNVTSVTRL 1023 Query: 174 VQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHL--YHCDHRGL 231 + + +++ + G T+ H C+ G Sbjct: 1024 SGTSNAVTTQLTYTSDYNQLASVTDPLGHTISLSYTNGCLTQITDALGHSTTIQCNSAGQ 1083 Query: 232 PLALVSTEGATEWCA 246 P A+ G T A Sbjct: 1084 PTAMQDALGNTTQLA 1098 Score = 46.3 bits (108), Expect = 0.002, Method: Composition-based stats. Identities = 36/258 (13%), Positives = 64/258 (24%), Gaps = 27/258 (10%) Query: 18 DRHGRLTE-KTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYLYDPLG 76 DR+G + + + R+ ++YDS +R+ T Y+YD G Sbjct: 824 DRYGNQIQFVYNGGLLQQAISPSGRSLTFNYDSGNRIASVT----DNSGRTVGYVYDSAG 879 Query: 77 RRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQPGSFTPLIR 136 T Y +D + DR + + Sbjct: 880 --------------TLATVTYPDNTTEQYTYDTNHRMLTMQDRRGHVWV----TNQYDAN 921 Query: 137 VETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSEESRRW 196 A A A T + +V P + + + Sbjct: 922 GRVAKQTYADNTSYQFAYTTNSNNVVTATTVTDPNGNKEQVAFDPISSYPSSDTYAYGTS 981 Query: 197 LASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEG---ATEWCAEYDE-WG 252 LA V + +D + Y D G ++ G A Y + Sbjct: 982 LAQTTTYVREPSGLVDSQTDALGRTTAYIYDALGNVTSVTRLSGTSNAVTTQLTYTSDYN 1041 Query: 253 NLLNEENPHQLQQLIRLP 270 L + +P + Sbjct: 1042 QLASVTDPLGHTISLSYT 1059 >UniRef50_C8W2V9 YD repeat protein n=3 Tax=Desulfotomaculum acetoxidans DSM 771 RepID=C8W2V9_DESAS Length = 2658 Score = 158 bits (398), Expect = 6e-37, Method: Composition-based stats. Identities = 63/297 (21%), Positives = 109/297 (36%), Gaps = 44/297 (14%) Query: 42 THRYHYDSQHRLVHYTRTQYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQ 101 TH + YD+ RL +T ++ Y YD G + K + + + Sbjct: 2256 THSFSYDADGRLASWT-----HGGIQQNYTYDAAGNLLTK--------GNRTFAYNNINE 2302 Query: 102 VTWYGWDGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGG 161 +T G+ D+ + D + Y + L+RV A+ D +++ Sbjct: 2303 ITSPGFTYDQNGNMTGDGS---FNYTYNALNQLVRVNKASDGSLVATYTYNHDGTRRNKV 2359 Query: 162 EDGGSVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKI 221 G+ + S R + G + + +++ Sbjct: 2360 TAQGTTNYNWD----------------ASGNLIREIGPNGTYCYYYVSGKLIAFENNQQL 2403 Query: 222 HLYHCDHRGLPLA--LVSTEGAT--EWCAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEE 277 ++ H + RG ++ + G T E +YD WG + E+ ++ R G YD E Sbjct: 2404 YIVHDNLRGDVISLSMTDDYGNTDQENRYDYDPWGTPICED--ESVKSPFRYAGYYYDTE 2461 Query: 278 SGLYYNRHRYYDPLQGRYITQDPIGLKG-----GWNFYQYP-LNPVQYIDSMGLASK 328 +GLYY + RYY P GR++T+DP N Y Y NPV +D G + Sbjct: 2462 TGLYYLKSRYYSPALGRFLTRDPHSFINHADPQTLNLYAYCGNNPVSTVDPTGHWDE 2518 Score = 47.1 bits (110), Expect = 0.002, Method: Composition-based stats. Identities = 30/170 (17%), Positives = 55/170 (32%), Gaps = 22/170 (12%) Query: 15 YRYDRH-GRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYLYD 73 Y YD + G + D + + T ++YD+ +RL+ T ++ Y YD Sbjct: 1967 YAYDANVGNMIGHADPL--------NHITW-FNYDTLNRLIRVTDPLN----RKAYYQYD 2013 Query: 74 PLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQPGSFTP 133 P+ + R R S T+YG + + D Y Sbjct: 2014 PVSNLIYTRDPRSASS-------SDNTYSTFYGPNNLNRLSALTDSQNRSATYTYDRSGN 2066 Query: 134 LIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESE 183 L + G+ + + A+ L + DG + L + + Sbjct: 2067 LTGIALPNGQSESLEYDN-ANRLSKITLSDGKYYNYYYDGAGELISVTDQ 2115 Score = 43.3 bits (100), Expect = 0.021, Method: Composition-based stats. Identities = 21/100 (21%), Positives = 33/100 (33%), Gaps = 25/100 (25%) Query: 2 WPDNRIARDAHYL----YRYDRHGRLTEKTDLIPEGV------------------IRTDD 39 W DN + + +YD G +T+KT + + ++ Sbjct: 1500 WTDNNLTQSQDAKGTTNCQYDNMGNMTQKTITVDSNPGNNIIETMTYNNYNELLTKKDNN 1559 Query: 40 ERTHRYHYDSQHRLVHYTRTQYAEPLVESRYLYDPLGRRV 79 R Y Y+SQ L+ T S Y YD G + Sbjct: 1560 GRETNYTYNSQGNLLS---TSDPNEKASSSYSYDQYGNII 1596 Score = 41.7 bits (96), Expect = 0.059, Method: Composition-based stats. Identities = 36/241 (14%), Positives = 70/241 (29%), Gaps = 25/241 (10%) Query: 5 NRIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEP 64 N I + YD++G +T + + Y Y++ ++LV + Sbjct: 2298 NNINEITSPGFTYDQNGNMT--------------GDGSFNYTYNALNQLVRVNKASDGSL 2343 Query: 65 LVESRYLYDPLGR--RVAKRVWRRERDLTGWMSLSRKPQVTW-YGWDGDRLTTIQNDRTR 121 + Y +D R A+ D +G + P T+ Y + +L +N++ Sbjct: 2344 VATYTYNHDGTRRNKVTAQGTTNYNWDASGNLIREIGPNGTYCYYYVSGKLIAFENNQQ- 2402 Query: 122 IQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLE 181 I +I + Q + + SV P E Sbjct: 2403 -LYIVHDNLRGDVISLSMTDDYGNTDQENRYDYDPWGTPICEDESVKSPFRYAGYYYDTE 2461 Query: 182 SEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGA 241 + + + S N DP ++ Y + P++ V G Sbjct: 2462 TGLYYLKSRYYSPALGRFLTRDPHSFINHADP---QTLNLYAYCGN---NPVSTVDPTGH 2515 Query: 242 T 242 Sbjct: 2516 W 2516 Score = 41.3 bits (95), Expect = 0.073, Method: Composition-based stats. Identities = 48/324 (14%), Positives = 74/324 (22%), Gaps = 58/324 (17%) Query: 5 NRIARDAHYL-----YRYDRHGRLT--------EKTDLIPEGVIRTDD-----------E 40 NR+ R L Y+YD L +D ++ Sbjct: 1995 NRLIRVTDPLNRKAYYQYDPVSNLIYTRDPRSASSSDNTYSTFYGPNNLNRLSALTDSQN 2054 Query: 41 RTHRYHYDSQHRLVHYTRTQYAEPLVE-----------------SRYLYDPLGRRVAKRV 83 R+ Y YD L +E Y YD G ++ Sbjct: 2055 RSATYTYDRSGNLTGIALPNGQSESLEYDNANRLSKITLSDGKYYNYYYDGAGELISVTD 2114 Query: 84 WRRERDLTGWMSLSRKPQVT-------WYGWD-GDRLTTIQNDRTRIQTIYQPGSFTPLI 135 + R T Y D L Y G+ Sbjct: 2115 QNGAGCSWNYDGAHRVTGTTDPLGYQLNYSLDKSGNLELESGIDYSCHYKYDGGNNIY-- 2172 Query: 136 RVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSEESRR 195 + R + V + + +S + + Sbjct: 2173 --KLYLPGAIIYYNRDGQGRVFNVEYNPSYIVNHQLHYATSQRIINYLVNGWCISIQDQY 2230 Query: 196 WLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLL 255 + G + + Y+ H + D G T G + YD GNLL Sbjct: 2231 FPYRSGYSYGYYADGTISGYSSWNGTHSFSYDADG--RLASWTHGGIQQNYTYDAAGNLL 2288 Query: 256 NEENPHQLQQL---IRLPGQQYDE 276 + N I PG YD+ Sbjct: 2289 TKGNRTFAYNNINEITSPGFTYDQ 2312 >UniRef50_D2UF28 Putative rhs family protein n=2 Tax=Xanthomonas albilineans RepID=D2UF28_XANAL Length = 1812 Score = 158 bits (398), Expect = 7e-37, Method: Composition-based stats. Identities = 76/348 (21%), Positives = 116/348 (33%), Gaps = 51/348 (14%) Query: 11 AHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRY 70 + LY YD GR T VI Y YD +RL ++ + Sbjct: 1313 GNILYGYDAVGRRTSMQAAGQAQVI---------YAYDDGNRLTGISQGSD-----TVSF 1358 Query: 71 LYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTW------------YGWDGDRLTTIQND 118 YD R + + + + + + ++ + W YG+D L Q Sbjct: 1359 AYDSANRPSSMTLPNQVQTVYVYNDANQVTGLAWGKAGQTALGSLGYGYDSRGLLVAQTG 1418 Query: 119 R---TRIQTIYQPGSFTPLIRVETATGELAKTQR--RSLADTLQQSGGEDGGSVVFPPVL 173 + T F R A G L D + +D + Sbjct: 1419 SHAPQALPTASTNNVFDDNNRQTQANGVAMSYDADGHLLTDGTRTYTWDDRDHLSQISQG 1478 Query: 174 VQMLDRLESEILADRVSEE----SRRWLASCGLTVEQMQN----------QMDPVYT--P 217 ++ + L R ++ + ++L TV++ Q +D Y Sbjct: 1479 GTVIASYSYDALGRRTAKTESGATTQYLYDGRNTVQETQGATINPILTGLGIDQRYARDD 1538 Query: 218 ARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEE 277 + D G L T G +YD +G + G++ D Sbjct: 1539 NGGRTYFLTDGLGSTRLLTDTNGNAVQRYDYDPYGTTTQSS--ASYNNPYQYTGRERDA- 1595 Query: 278 SGLYYNRHRYYDPLQGRYITQDPIGLKGGWNFYQY-PLNPVQYIDSMG 324 SGLYY R RYY P R+I++DPI L GG N Y Y NPV Y D +G Sbjct: 1596 SGLYYYRARYYTPELARFISEDPIKLAGGVNTYAYTGGNPVMYRDPVG 1643 Score = 55.2 bits (131), Expect = 5e-06, Method: Composition-based stats. Identities = 38/242 (15%), Positives = 58/242 (23%), Gaps = 40/242 (16%) Query: 4 DNRIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAE 63 +NR + YD G L + T Y +D + L ++ Sbjct: 1437 NNRQTQANGVAMSYDADGHLL--------------TDGTRTYTWDDRDHLSQISQ----G 1478 Query: 64 PLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQ 123 V + Y YD LGRR AK T Y +DG T Sbjct: 1479 GTVIASYSYDALGRRTAKTESGA---------------TTQYLYDGRNTVQETQGATINP 1523 Query: 124 TIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRL--- 180 + G R + T L + G + P Sbjct: 1524 ILTGLGIDQRYARDDNGGRTYFLTDGLGSTRLLTDTNGNAVQRYDYDPYGTTTQSSASYN 1583 Query: 181 ESEILADRVSEESRRWLASCGLTVEQMQN--QMDPVYTPARKIHLYHCDHRGLPLALVST 238 R + S + ++ DP+ + G P+ Sbjct: 1584 NPYQYTGRERDASGLYYYRARYYTPELARFISEDPIKLAGGVNTYAYTG--GNPVMYRDP 1641 Query: 239 EG 240 G Sbjct: 1642 VG 1643 Score = 46.3 bits (108), Expect = 0.002, Method: Composition-based stats. Identities = 47/303 (15%), Positives = 77/303 (25%), Gaps = 46/303 (15%) Query: 10 DAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESR 69 Y G+ T +TD + R Y YDS R + T+ + Sbjct: 1016 AQTITYERTASGQTTARTDAL---------GRRTEYAYDSAGRPLQITQLAGTAQARTTT 1066 Query: 70 YLY----------DPLGRRVAKRVWRRERDLTGWM-----------------SLSRKPQV 102 Y D LGR + R Sbjct: 1067 VSYTGDGDLAAITDALGRTTSFAYTNRCLTSVTTPLGQTSTATCNGAGQRLSVTDPLGHT 1126 Query: 103 TWYGWDGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSG-- 160 + + W D LT I + R + + + LI V+ A G +++ + +L + Sbjct: 1127 SNFTWSNDDLTAITDALGRQTQL-RYDALGRLIGVQDAQGNVSRFEYDALGRQTKAVDPL 1185 Query: 161 --GEDGGSVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPA 218 G V +L A + G + M V + Sbjct: 1186 GNSVSTGFDANGNVSAILLPNGAGVTYAYDALNRRISRTDALGQAESWTYDSMGRVASHT 1245 Query: 219 ---RKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQYD 275 + Y D G P A YD L+ + G +D Sbjct: 1246 DRRNRTTTYSYDALGRPSTATLPGAGGTLSASYDAGNRLVALSDSLSGTLSWSYDG--FD 1303 Query: 276 EES 278 + + Sbjct: 1304 QVT 1306 >UniRef50_P77759 Putative uncharacterized protein ylbH n=12 Tax=Escherichia coli RepID=YLBH_ECOLI Length = 236 Score = 157 bits (397), Expect = 7e-37, Method: Composition-based stats. Identities = 69/95 (72%), Positives = 77/95 (81%) Query: 233 LALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEESGLYYNRHRYYDPLQ 292 LAL+ +G W EYDEWGN LNEENPH L Q RLPGQQYD+ESGLYYNR+RYYDPLQ Sbjct: 2 LALMDADGNIAWSGEYDEWGNQLNEENPHHLHQPYRLPGQQYDKESGLYYNRNRYYDPLQ 61 Query: 293 GRYITQDPIGLKGGWNFYQYPLNPVQYIDSMGLAS 327 GRYITQDPIGL+GGW+ Y YPLNPV ID +GL+ Sbjct: 62 GRYITQDPIGLEGGWSLYAYPLNPVNGIDPLGLSP 96 >UniRef50_Q3BS17 Rhs family protein n=18 Tax=Xanthomonas RepID=Q3BS17_XANC5 Length = 1545 Score = 157 bits (396), Expect = 9e-37, Method: Composition-based stats. Identities = 72/333 (21%), Positives = 113/333 (33%), Gaps = 37/333 (11%) Query: 15 YRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYLYDP 74 + +D G L T L P G + YD+ RL T V Y YD Sbjct: 1102 FGFDPAGNL---TALTPAGNPAPEIG----LGYDALGRLTGL--TDGVTGTVIDGYSYDA 1152 Query: 75 LGRRVAKRVWRRERDLTGWMSLSRKPQVTWY--GWDGDRLTTIQNDRTRIQTIYQPGSFT 132 G R++ +V + + R + +D TT R Y + Sbjct: 1153 TGNRLSAKVGTTTQIYSYPTDSHRLSAMAGVARTYDATGNTTAIGGTARQ---YTYDTTG 1209 Query: 133 PLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSEE 192 + + A + + L++ G L + ++ ++ Sbjct: 1210 RMTQARRAGAVTMNYRYNGKGEQLRRFLG-----TTNTYTLFDEAGHWLGDYDSNGAPKQ 1264 Query: 193 SRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATE---WCAEYD 249 WL + + A K+H DH G P ++ W + + Sbjct: 1265 QAIWLDDLPV----------GLLANANKLHYIEPDHLGSPRVVIDPTRDVAVWTWSLKGE 1314 Query: 250 EWGNLLNEENPH----QLQQLIRLPGQQYDEESGLYYNRHRYYDPLQGRYITQDPIGLKG 305 +GN ++P L +R PGQ++D SGL N R Y+ GRY+ DPIGL G Sbjct: 1315 AFGNTAPNQDPDGDGAALVLDMRFPGQRFDAASGLNQNYFRDYEAATGRYVQSDPIGLSG 1374 Query: 306 GWNFYQYP-LNPVQYIDSMGLASKYGHLNNGGY 337 G Y Y +P+ D GL S N+ Sbjct: 1375 GITTYSYTEGSPLSKSDPFGLMSFGKSCNSAQQ 1407 Score = 62.5 bits (150), Expect = 4e-08, Method: Composition-based stats. Identities = 43/256 (16%), Positives = 78/256 (30%), Gaps = 31/256 (12%) Query: 14 LYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYLYD 73 + YD +G T TD + + YD +RL + A ++++ YD Sbjct: 823 DFAYDANGNATTVTDALAT---------ATQSEYDPLNRLSRTLQ-DVAGIKADTKFEYD 872 Query: 74 PLGRRVAKRVWRRERDLTGWMS-------LSRKPQVTWYGWDGDRLTTIQNDRTRIQTIY 126 L + + S VT Y +D Q D T Y Sbjct: 873 ALDNLTKVTDPKGLDTTYDYNGFGELVKLTSPDTGVTSYTYDSAGNRATQTDARGNTTAY 932 Query: 127 QPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILA 186 + L +V T L T + Q+ G + + ++ Sbjct: 933 SYDALNRLTKVTHPTTSLNVTYTYDV----TQTACASGETFSIGRLTKMQDGGAITQYCY 988 Query: 187 DRVSEESRRWLASCGLTV-----EQMQNQMDPVYTPARKIHLYHCDHRGLPLAL-VSTEG 240 +R + R+ S G + + Q+ + P + Y + +G + V+ G Sbjct: 989 NRFGDLVRKVQTSNGTALVLRYDYTVGGQLRRMTYPNGAVVDYVRNAQGQTTQIGVTPAG 1048 Query: 241 ATEWC----AEYDEWG 252 + A Y +G Sbjct: 1049 GSRQVLLGNASYYPFG 1064 Score = 58.7 bits (140), Expect = 5e-07, Method: Composition-based stats. Identities = 48/282 (17%), Positives = 80/282 (28%), Gaps = 40/282 (14%) Query: 23 LTEKTDLIPEGVIRT---DDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYLYDPLGRRV 79 + D P G++R D + YD+ HRL T Y D G RV Sbjct: 731 RITRIDYWPTGLVRQVTQPDGAFTAFTYDAAHRLTDITDNAGN----TVHYTLDNAGNRV 786 Query: 80 A----------KRVWRRERDLTGWM--SLSRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQ 127 KR R + G + + T + +D + T D T + Sbjct: 787 KEDTKDAAGTLKRTLSRVYNQLGQLKTQATAASDPTDFAYDANGNATTVTDALATATQSE 846 Query: 128 PGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILAD 187 + PL R+ ++A + ADT + D + V P L++ + Sbjct: 847 ---YDPLNRLSRTLQDVAGIK----ADTKFEYDALDNLTKVTDP------KGLDTTYDYN 893 Query: 188 RVSEESRRWLASCGLTVEQMQNQMDPVYTPARK--IHLYHCDHRGLPLALVSTEGATEWC 245 E + G+T + + + Y D + + Sbjct: 894 GFGELVKLTSPDTGVTSYTYDSAGNRATQTDARGNTTAYSYDALNRLTKVTHPTTSLNVT 953 Query: 246 AEYDEWGNLLNEENPHQLQQLIRLPGQQYD--EESGLYYNRH 285 YD + I + D + YNR Sbjct: 954 YTYD----VTQTACASGETFSIGRLTKMQDGGAITQYCYNRF 991 Score = 58.3 bits (139), Expect = 7e-07, Method: Composition-based stats. Identities = 44/291 (15%), Positives = 87/291 (29%), Gaps = 32/291 (10%) Query: 2 WPDNRIARDAH-----YLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQH----- 51 WP + + + YD RLT+ TD V T D +R D++ Sbjct: 738 WPTGLVRQVTQPDGAFTAFTYDAAHRLTDITDNAGNTVHYTLDNAGNRVKEDTKDAAGTL 797 Query: 52 -RLVHYTRTQYAEPLVESR-------YLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQV- 102 R + Q + ++ + YD G + + L+R + Sbjct: 798 KRTLSRVYNQLGQLKTQATAASDPTDFAYDANGNATTVTDALATATQSEYDPLNRLSRTL 857 Query: 103 ---------TWYGWDGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLA 153 T + +D T D + T Y F L+++ + + S Sbjct: 858 QDVAGIKADTKFEYDALDNLTKVTDPKGLDTTYDYNGFGELVKLTSPDTGVTSYTYDSAG 917 Query: 154 DTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDP 213 + Q+ G + + + L ++ + V+ +C ++ Sbjct: 918 NRATQTDA-RGNTTAYSYDALNRLTKVTHPTTSLNVTYTYDVTQTACASGETFSIGRLTK 976 Query: 214 VYTPARKIHLYHCDHRGL-PLALVSTEG-ATEWCAEYDEWGNLLNEENPHQ 262 + I Y + G + ++ G A +Y G L P+ Sbjct: 977 M-QDGGAITQYCYNRFGDLVRKVQTSNGTALVLRYDYTVGGQLRRMTYPNG 1026 >UniRef50_A9EZF2 Conserved carbohydrate-binding protein, Rhs family n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=A9EZF2_SORC5 Length = 1352 Score = 157 bits (396), Expect = 1e-36, Method: Composition-based stats. Identities = 67/320 (20%), Positives = 111/320 (34%), Gaps = 25/320 (7%) Query: 12 HYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYL 71 LY YD G L E+ D R RY YD L+ + P + Sbjct: 872 DRLYAYDAAGALVERNDR------RWGIS---RYSYDRLGMLLAAS-----SPKGRETFE 917 Query: 72 YDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDG-DRLTTIQNDRTRIQTIYQPGS 130 YD G TG L + + Y +D +R T + ++ Sbjct: 918 YDVGG----SLKPAGSAWETGPGGLLLRTEKAAYAYDAANRRTRETRSDGATEYLWD--C 971 Query: 131 FTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVS 190 L V G + + +++ F + +E ++ Sbjct: 972 RGQLREVRRPDGTRVLFAYDAFSRRVRKEIVPPAVPSAFDSADARKPRVVEYVWDGLCLA 1031 Query: 191 EESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDE 250 E + V + + + I+ DH G L+ EG W A + Sbjct: 1032 AEIDS-ERGTRVFVHEPGTMSPLLQQDSTAIYAVVTDHVGTTTELIGPEGEVAWSAHHSA 1090 Query: 251 WGNLLNEENPHQ---LQQLIRLPGQQYDEESGLYYNRHRYYDPLQGRYITQDPIGLKGGW 307 +G + P + RL GQ +DEE+ L Y R+RY+DP R+++ DP+ L G Sbjct: 1091 FGIITEAARPKGGPLVASPFRLLGQYHDEETELCYVRYRYFDPKTARFLSPDPLELFGSR 1150 Query: 308 NFYQYPLNPVQYIDSMGLAS 327 N + + +P + D +GL+ Sbjct: 1151 NLFAFDGSPTTHADPLGLSC 1170 Score = 64.8 bits (156), Expect = 6e-09, Method: Composition-based stats. Identities = 54/284 (19%), Positives = 91/284 (32%), Gaps = 66/284 (23%) Query: 8 ARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHR---------------------YH 46 R Y YDR G L + D + + Y Sbjct: 889 RRWGISRYSYDRLGMLLAASSPKGRETFEYDVGGSLKPAGSAWETGPGGLLLRTEKAAYA 948 Query: 47 YDSQHRLVHYTRTQYA--------EPLVESR--------YLYDPLGRRVAKRVWRRERDL 90 YD+ +R TR+ A L E R + YD RRV K + Sbjct: 949 YDAANRRTRETRSDGATEYLWDCRGQLREVRRPDGTRVLFAYDAFSRRVRKEIVPPAVPS 1008 Query: 91 TGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQ-TIYQPGSFTPLIRVET---------- 139 + +RKP+V Y WDG L + + +++PG+ +PL++ ++ Sbjct: 1009 AFDSADARKPRVVEYVWDGLCLAAEIDSERGTRVFVHEPGTMSPLLQQDSTAIYAVVTDH 1068 Query: 140 ---------ATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESE----ILA 186 GE+A + S + ++ GG +V P + E + Sbjct: 1069 VGTTTELIGPEGEVAWSAHHSAFGIITEAARPKGGPLVASPFRLLGQYHDEETELCYVRY 1128 Query: 187 DRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRG 230 ++ R+L+ L + +N +P H D G Sbjct: 1129 RYFDPKTARFLSPDPLELFGSRNLFAFDGSPTT-----HADPLG 1167 Score = 53.7 bits (127), Expect = 2e-05, Method: Composition-based stats. Identities = 53/288 (18%), Positives = 88/288 (30%), Gaps = 31/288 (10%) Query: 3 PDNRIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYA 62 + R RD +R+D GR V R R D+ R Sbjct: 565 AEERTPRDGLRRWRHDALGRPI---------VYVDPLGRVTRRELDALGRPTALHLPDGT 615 Query: 63 EPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRI 122 R+ +D LGR + + + L +VT DG + + R+ Sbjct: 616 S----LRFEHDALGRLTRRTDTLGRVETFRYTGLKSPVEVTQ--PDGAIWSLSFDLNERL 669 Query: 123 QTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLES 182 Q + P T +R + A + RS + ++ G + L Sbjct: 670 QQVKNPKGETFDLRYDRAGNLR---EYRSYDGRISRAQHGKNGRLARVDHADGTFRALRH 726 Query: 183 EILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHL-YHCDHRGLPLALVSTEGA 241 + ++EE+ + + + + PA +I L D G +A G Sbjct: 727 DGAGRILAEETPHGVVKIETPEDLVVEYI--FEDPAGEIRLRVERDPLGRVVAET-QNGR 783 Query: 242 TEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEE---SGLYYNRHR 286 EYD + R YDEE S L ++ +R Sbjct: 784 MI-RYEYDA--QNRCTARHLPTGHITRYT---YDEEGNVSSLDHDGYR 825 Score = 47.9 bits (112), Expect = 9e-04, Method: Composition-based stats. Identities = 52/295 (17%), Positives = 79/295 (26%), Gaps = 75/295 (25%) Query: 12 HYLYRYDRHGRLTEKTDLIPE----------GVIRTDDERTHRYHYDSQHRLVHYTRTQY 61 + D G LT TD I V R T Y YD ++RL T Sbjct: 471 TLTFTRDGRGNLTRITDSIGRVVELEYSDDLLVRRHAGGLTTEYGYDHRNRLTWVRYTSG 530 Query: 62 AEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTR 121 A + YD GR A +G DG R Sbjct: 531 AFLTL----TYDEQGRLAA-----------------------VHGPDGLR---------- 553 Query: 122 IQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLE 181 G FT E +T R L + V P+ L+ Sbjct: 554 -------GGFTYD---EQHNAAEERTPRDGL--RRWRHDALGRPIVYVDPLGRVTRRELD 601 Query: 182 SEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGA 241 + + L + ++ + D + ++ + P+ + +GA Sbjct: 602 ALGRPTALHLPDGTSLRFEHDALGRLTRRTDTL----GRVETFRYTGLKSPVEVTQPDGA 657 Query: 242 TEWCAEYDEWGNLLNEENPHQLQQLIRL--PGQQYDEESGLYYNRHRYYDPLQGR 294 W +D L +NP +R G + +R YD R Sbjct: 658 I-WSLSFDLNERLQQVKNPKGETFDLRYDRAGNLRE---------YRSYDGRISR 702 Score = 45.2 bits (105), Expect = 0.005, Method: Composition-based stats. Identities = 35/261 (13%), Positives = 71/261 (27%), Gaps = 34/261 (13%) Query: 7 IARDAHYLYRYDRHGRLTEKTDLIPE------------GVIRTDDERTHRYHYDSQHRLV 54 + + +D GRLT +TD + + D +D RL Sbjct: 611 LPDGTSLRFEHDALGRLTRRTDTLGRVETFRYTGLKSPVEVTQPDGAIWSLSFDLNERLQ 670 Query: 55 HYTRTQYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTT 114 + + YD G L + S + +G +G RL Sbjct: 671 QVKNPKGETFDL----RYDRAGN------------LREYRSYDGRISRAQHGKNG-RLAR 713 Query: 115 IQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLV 174 + + + + G+ L +T + + + + + V L Sbjct: 714 VDHADGTFRALRHDGAGRILAEETPHGVVKIETPEDLVVEYIFEDPAGEIRLRVERDPLG 773 Query: 175 QMLDRLESEILADRVSEESRRWLA---SCGLTVEQMQNQMDPVYTPARKIHL--YHCDHR 229 +++ ++ + + R A G ++ V + + D Sbjct: 774 RVVAETQNGRMIRYEYDAQNRCTARHLPTGHITRYTYDEEGNVSSLDHDGYRVEIQRDLA 833 Query: 230 GLPLALVSTEGATEWCAEYDE 250 G + V E E D Sbjct: 834 GSVVRKVFASAGVEARREVDP 854 Score = 42.1 bits (97), Expect = 0.044, Method: Composition-based stats. Identities = 69/385 (17%), Positives = 103/385 (26%), Gaps = 41/385 (10%) Query: 6 RIARDAHYL--YRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAE 63 RI A +D G + P G RT + Y LV T Sbjct: 305 RIVDTARRTVVLTHDGDGHIVRLQVFPPGGEGRTPVHAV-SFAYSDGGELVKVTDALGH- 362 Query: 64 PLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQ 123 Y YD R + + + S + +W GD + +Q Sbjct: 363 ---AETYGYDEQRRMNHRTLPTGLSFHYVYDPESGRCVRSW----GDGDLHAGDLTYDLQ 415 Query: 124 TIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESE 183 + P RV T E R + D L E + D L Sbjct: 416 QGITHLTGNPEPRVFTWRPEDGSVVREASPDGLSVRDLEFDADGLLLKTKNAAGDTL--T 473 Query: 184 ILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATE 243 D +R + + + + + Y DHR + T GA Sbjct: 474 FTRDGRGNLTRITDSIGRVVELEYSDDLLVRRHAGGLTTEYGYDHRNRLTWVRYTSGAFL 533 Query: 244 WCAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEESGLYYNRHRYYDPLQG--RYITQDPI 301 YDE G L P L+ YDE+ +N P G R+ D + Sbjct: 534 -TLTYDEQGRLAAVHGPDGLRGGFT-----YDEQ----HNAAEERTPRDGLRRW-RHDAL 582 Query: 302 GLKGGWNFYQYPLNPVQYIDSMGLASKYGHLNNGGYGARPNKPPTPDPSKLPDIAKQLRL 361 G P+ Y+D +G ++ L+ G + P D +L Sbjct: 583 GR------------PIVYVDPLGRVTR-RELDALGRPTALHLPDGTSLRFEHDALGRLTR 629 Query: 362 PYPIDQASSAPNV--FKTFFRALSP 384 K+ P Sbjct: 630 RTDTLGRVETFRYTGLKSPVEVTQP 654 >UniRef50_A4B8X0 YD repeat n=1 Tax=Reinekea blandensis MED297 RepID=A4B8X0_9GAMM Length = 1098 Score = 156 bits (395), Expect = 1e-36, Method: Composition-based stats. Identities = 98/497 (19%), Positives = 147/497 (29%), Gaps = 123/497 (24%) Query: 5 NRIA----RDAHYLYRYDRHGRLTEKTDLIPEGVIRTD---------------------- 38 NR+ Y Y+YD G T++ P D Sbjct: 519 NRLTAADGPYGSYAYQYDEVGNRTQRQKATPTETFVEDYDYATDANQLTNIDITTDGVET 578 Query: 39 ------------------DERTHRYHYDSQHRLVHYTRTQYAEPLVESRYLYDPLGRRV- 79 ++RT YD RL + ++Y Y+PLG+R+ Sbjct: 579 DNRQFVYSESGQLILDMNNDRTLDLAYDENDRLAEVEIHEGP---QLAQYTYNPLGQRIT 635 Query: 80 ---------------AKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQT 124 KR+ + + Q + G L T+ T + Sbjct: 636 KMFEGERLHIHYDAQGKRIAETDANGNILREYLYLGQQPIAMFFGSELATVAEPGTVTPS 695 Query: 125 IYQPGSFTPLIR------------------------------------------VETATG 142 + F +E + Sbjct: 696 RIEAEDFINSYDTSAGDNGDSVCDTGDTDSQATGDADGVCNIGWTAAGEWTEYTIEVSAA 755 Query: 143 ELAKTQRRSLADTLQQSGGEDGGSVVFP-----PVLVQMLDRLESEILADRVSEESRRWL 197 + RS A++ Q+ + + F P + E + R Sbjct: 756 GTYQINVRSAANSGTQTISLELDGLPFDSAKAVPAQGWQTYSDIEFLDDIPAGEHTLRLR 815 Query: 198 ASCG------LTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEW 251 G L+ E + +D ++ H DH G P L + G W + Sbjct: 816 FDTGEVNVNYLSFESVSEGIDTQQVNV-EVAFIHSDHLGTPKLLTDSLGNVVWQQHTTPF 874 Query: 252 GNLLNEENPHQLQQLIRLPGQQYDEESGLYYNRHRYYDPLQGRYITQDPIGLKGGWNFYQ 311 G + +E + L L PGQ D ESGL YN +R YDP GRYI DPIGL GG N Y Sbjct: 875 GEV-HETLGNGLGYLQSFPGQWRDSESGLSYNYYRDYDPSLGRYIQSDPIGLGGGLNTYA 933 Query: 312 YP-LNPVQYIDSMGLASKYGHLNNGGYG----ARPNKPPTPDPSKLPDIAKQLRLPYPID 366 Y NP+ ID +GL + G A P D +A L +P Sbjct: 934 YVGGNPISRIDPLGLDYEDMVAALPALGGMALADTPAPGPADAVAGVSLAILLMIPGDST 993 Query: 367 QASSAPNVFKTFFRALS 383 + +V +T + Sbjct: 994 GYEGSSDVPETPGHCTA 1010 Score = 55.6 bits (132), Expect = 4e-06, Method: Composition-based stats. Identities = 45/289 (15%), Positives = 77/289 (26%), Gaps = 58/289 (20%) Query: 9 RDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEP---- 64 + +D G +T +T+ + T Y YD+ +RL Sbjct: 294 DTGVTTFTHDEAGNVTSRTNA---------NGTTIEYSYDALNRLTEQRYPADPTKNVLF 344 Query: 65 --------------------------LVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSR 98 ++ Y YD LGR VA++ + T + Sbjct: 345 TYDNVSNGITGTPNYGKGQLTGITHYGGQTEYQYDQLGRLVAEQRSFDSQTYTTLYFFNS 404 Query: 99 KPQVTWYGWDGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQ 158 Q+ + RL Y + L + T A Q + L Sbjct: 405 VGQLEQMQYPSGRLVN-----------YTYDNQGRLAGISTQASAGATVQP--VVTDLHY 451 Query: 159 SGGEDGGSVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPA 218 + L Q L D VS + W+ L + + Sbjct: 452 LPFGPTSGFTYGNGLTQNFQYDLDYRLTDIVSN-VQNWVYQYDLNSNIERITHVDDVSKD 510 Query: 219 RKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLI 267 ++ Y D A G+ + +YDE GN + + + Sbjct: 511 QQ---YQYDALNRLTAADGPYGS--YAYQYDEVGNRTQRQKATPTETFV 554 Score = 45.9 bits (107), Expect = 0.003, Method: Composition-based stats. Identities = 40/320 (12%), Positives = 72/320 (22%), Gaps = 67/320 (20%) Query: 9 RDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVES 68 Y D G +T +T I R H +D +RL + + Sbjct: 161 DGERIDYTLDSAGNITAQTVKDASSSIV----RQHTQVFDDLNRLREHV---GGTDQQTT 213 Query: 69 RYLYDPLGRRVAKRV-WRRERDLTGWMSLSRKPQ-------VTWYGWDGDRLTTIQNDRT 120 + YD R A + +LSR + T ++ L D Sbjct: 214 KLDYDADSRNTAVTDPKNNPPTQNSYDALSRLTEVVDPEGGTTTMTYNDHGLIETVTDPR 273 Query: 121 RIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRL 180 + T Y + L R+ T+ T A + +G ++ + + L Sbjct: 274 GLTTRYDYNGYGELERI-TSPDTGVTTFTHDEAGNVTSRTNANGTTIEYSYDALNRLTEQ 332 Query: 181 ESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLA------ 234 + + +++ T Y D G +A Sbjct: 333 RYPADPTKNVLFTYDNVSNGITGTPNYGKGQLTGITHYGGQTEYQYDQLGRLVAEQRSFD 392 Query: 235 -----------------------------LVSTEGA----------------TEWCAEYD 249 +G Y Sbjct: 393 SQTYTTLYFFNSVGQLEQMQYPSGRLVNYTYDNQGRLAGISTQASAGATVQPVVTDLHYL 452 Query: 250 EWGNLLNEENPHQLQQLIRL 269 +G + L Q + Sbjct: 453 PFGPTSGFTYGNGLTQNFQY 472 Score = 44.8 bits (104), Expect = 0.006, Method: Composition-based stats. Identities = 35/244 (14%), Positives = 60/244 (24%), Gaps = 21/244 (8%) Query: 38 DDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYLYD-PLGRRVAKRVWRRERDLTGWMSL 96 RT Y Y+ ++ + V + Y YD ++ + Sbjct: 26 GWARTTSYTYNELDQVTSVDGPRTDVEDVTT-YDYDLATANLLSVTNATGHTTTYSNYTG 84 Query: 97 SRKPQV----------TWYGWDGDRLT-TIQNDRTRIQTIYQPGSFTPLIRVETATGELA 145 Q Y W G+ L T+ T+Y L VE G + Sbjct: 85 GGLAQTITTPNGAVIDVQYDWKGNVLQQTVTTQSGSQTTVYGYNKSGSLTSVEQPNGAVI 144 Query: 146 KTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVE 205 A L DG + + I A V + S + + Sbjct: 145 -FYEYDGAQRLVAMSNSDGERIDYTLDS-------AGNITAQTVKDASSSIVRQHTQVFD 196 Query: 206 QMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQ 265 + + V ++ D A+ + YD L +P Sbjct: 197 DLNRLREHVGGTDQQTTKLDYDADSRNTAVTDPKNNPPTQNSYDALSRLTEVVDPEGGTT 256 Query: 266 LIRL 269 + Sbjct: 257 TMTY 260 >UniRef50_Q6MNG4 Putative uncharacterized protein n=1 Tax=Bdellovibrio bacteriovorus RepID=Q6MNG4_BDEBA Length = 442 Score = 156 bits (394), Expect = 2e-36, Method: Composition-based stats. Identities = 74/315 (23%), Positives = 116/315 (36%), Gaps = 32/315 (10%) Query: 18 DRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYLYDPLGR 77 D GR+ KT ++ Y +DS RL + Y YD Sbjct: 25 DAMGRIDGKTQVMNAVTDNYV------YTFDSTGRLTQT----NKNSATVATYSYDSNSN 74 Query: 78 RVAKRVWRRERDLTGWMSLSRKPQVT---WYGWDGDRLTTIQNDRTRIQTIYQPGSFTPL 134 R + + T T Y +GD LT N T T Y F L Sbjct: 75 RNGGTIGAQPTTATYDDQDRLLTYNTLSFTYNANGDLLTKT-NSVTSTTTQYVYDVFGNL 133 Query: 135 IRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSEESR 194 +V +G + + D L + G+ VV + R+ +E+ A + Sbjct: 134 TQVTLPSGAVITYE----IDALNRRTGKLVNGVVQKRWIYMDQYRIAAELNAAGTITKRF 189 Query: 195 RWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALV-STEGATEWCAEYDEWGN 253 + + + + + + + DH G P +V ++G ++DE+G Sbjct: 190 IYASKGNIPDYMIASGVK---------YRIISDHLGSPRLVVKQSDGTVIQRMDHDEYGR 240 Query: 254 LLNEENPHQLQQLIRLPGQQYDEESGLYYNRHRYYDPLQGRYITQDPIGLKGGW-NFYQY 312 ++ + NP L G YD ++ L R YD GR+ ++DPI KGG N Y Y Sbjct: 241 VIADTNPGYL--PFGFAGGLYDHQTSLVRFGARDYDSEVGRWTSKDPILFKGGDSNLYGY 298 Query: 313 PLN-PVQYIDSMGLA 326 LN PV ++D GL Sbjct: 299 VLNDPVNFVDPNGLM 313 Score = 44.0 bits (102), Expect = 0.011, Method: Composition-based stats. Identities = 47/265 (17%), Positives = 71/265 (26%), Gaps = 40/265 (15%) Query: 6 RIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPL 65 R+ + Y+ +G L KT+ + T +Y YD L T A Sbjct: 94 RLLTYNTLSFTYNANGDLLTKTNSVTST--------TTQYVYDVFGNLTQVTLPSGA--- 142 Query: 66 VESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTI 125 Y D L RR K V + Q W D R+ N I Sbjct: 143 -VITYEIDALNRRTGKLV-------------NGVVQKRWIYMDQYRIAAELNAAGTITKR 188 Query: 126 YQPGSFTPL----------IRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQ 175 + S + R+ + + + T+ Q D V Sbjct: 189 FIYASKGNIPDYMIASGVKYRIISDHLGSPRLVVKQSDGTVIQRMDHDEYGRVIADTNPG 248 Query: 176 MLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLAL 235 L + L D + R+ A + DP+ +LY P+ Sbjct: 249 YLPFGFAGGLYDHQTSLV-RFGARDYDSEVGRWTSKDPILFKGGDSNLYGY-VLNDPVNF 306 Query: 236 VSTEGATEWCAEYDEWGNLLNEENP 260 V G WG+ N Sbjct: 307 VDPNGLMVISI---SWGSSFFASNS 328 >UniRef50_D2KTW4 Putative uncharacterized protein n=2 Tax=Streptomyces RepID=D2KTW4_9ACTO Length = 1097 Score = 156 bits (393), Expect = 2e-36, Method: Composition-based stats. Identities = 78/327 (23%), Positives = 111/327 (33%), Gaps = 32/327 (9%) Query: 11 AHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRY 70 H Y Y G +T+ IR T + D R+ + E +Y Sbjct: 708 QHRAYTYRPDGYVTQ---------IRELTTGTRGFTLDPVGRVTAVQAHGWTE-----KY 753 Query: 71 LYDPLGRRVAKRVWR--RERDLTGWMSLSRKPQVTWYGWDG-DRLTTIQN---DRTRIQT 124 YD +G + + T +L R T Y D RL + Sbjct: 754 AYDTVGNQTHATAPDHPAAGERTCDGTLIRHAGRTRYQHDAAGRLIRKTRKLLNGRTRTW 813 Query: 125 IYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEI 184 Y + L + T GE L +S GG+ + RL + Sbjct: 814 TYTWNAEDRLAKATTPDGEEWTYTYDPLGRRTAKSS--QGGTAL---TFTWDAGRLAEQT 868 Query: 185 LADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEW 244 D + + W S Q +P T + H D G P L++ +G W Sbjct: 869 AHDGL---TTTWDYSPDTHRPLTQVDQEPGST---RFHTIVTDPIGTPTELITPDGHLAW 922 Query: 245 CAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEESGLYYNRHRYYDPLQGRYITQDPIGLK 304 WG L +R PGQ D E+GL YN HRYYDP +Y+T DP+GL Sbjct: 923 QHRTTLWGTPLP-TPSDTTTCPLRFPGQYADPETGLNYNHHRYYDPETAQYLTPDPLGLA 981 Query: 305 GGWNFYQYPLNPVQYIDSMGLASKYGH 331 + Y NP + D +GL + Sbjct: 982 PAPHPRAYVHNPHTWQDPLGLEGCGDN 1008 Score = 88.3 bits (217), Expect = 6e-16, Method: Composition-based stats. Identities = 38/141 (26%), Positives = 51/141 (36%), Gaps = 24/141 (17%) Query: 4 DNRIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAE 63 I Y++D GRL KT + G R T Y ++++ RL T Sbjct: 779 GTLIRHAGRTRYQHDAAGRLIRKTRKLLNGRTR-----TWTYTWNAEDRLAKATTPDGE- 832 Query: 64 PLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLT-TIQNDRTRI 122 E Y YDPLGRR AK S+ + WD RL +D Sbjct: 833 ---EWTYTYDPLGRRTAKS--------------SQGGTALTFTWDAGRLAEQTAHDGLTT 875 Query: 123 QTIYQPGSFTPLIRVETATGE 143 Y P + PL +V+ G Sbjct: 876 TWDYSPDTHRPLTQVDQEPGS 896 Score = 55.2 bits (131), Expect = 6e-06, Method: Composition-based stats. Identities = 37/246 (15%), Positives = 66/246 (26%), Gaps = 27/246 (10%) Query: 40 ERTHRYHYDSQHRLVHYTRTQYAE-----------------PLVESRYLYDPLGRRVAKR 82 T RYHYD RL+ R R+ YD G R + Sbjct: 305 GHTTRYHYDDLDRLIGIERPDGTRAEATYDDRGLPLEIREPNGGTWRHTYDDRGARTSTT 364 Query: 83 VWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATG 142 + +T D TT I R Sbjct: 365 DPSGATTHYTYNGSGHLSTIT----DALGNTTQVTTNAAGLPIAVTDPLGNTTRARRGPH 420 Query: 143 ELAKTQRRSLADTLQQSGGEDGGSV-VFPPVLVQMLDRLESEILADRVSEESRRWLASCG 201 L +T +Q +G P + + + ++E ++++ Sbjct: 421 GRVIAITDPLGNTTRQGWTIEGEPAWRERPDGSREVWQWDTEGNLAHHTDQAGHTTTYTH 480 Query: 202 LTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPH 261 +Q + DP + + D + + +G+ W YD G+L E + + Sbjct: 481 THFDQPATRTDPDGAH----YTFTYDTELRLTEVTNPQGSQ-WHYTYDAAGHLTAETDFN 535 Query: 262 QLQQLI 267 + Sbjct: 536 GATRTY 541 Score = 51.0 bits (120), Expect = 1e-04, Method: Composition-based stats. Identities = 46/267 (17%), Positives = 70/267 (26%), Gaps = 37/267 (13%) Query: 13 YLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVH--------YTRTQYAEP 64 ++YD R+T TD + T+ Y YD + R++ R Y Sbjct: 201 LRFQYDDAHRITSWTDR---------NGTTYAYVYDHRGRVLRGIGPDGILSGRMHYNAQ 251 Query: 65 LVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDG-DRLTTIQNDRTRIQ 123 +RY D LG + T WD +R D Sbjct: 252 TRTNRYT-DSLGN---TTTYLCNEAYRVIAETDPLGNTTHTEWDANNRHPIAVTDPLGHT 307 Query: 124 TIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESE 183 T Y LI +E G A+ L + +GG+ DR Sbjct: 308 TRYHYDDLDRLIGIERPDGTRAEATYDDRGLPL-EIREPNGGTWRHTYD-----DRGART 361 Query: 184 ILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATE 243 D + G + + GLP+A+ G T Sbjct: 362 STTDPSGATTHYTYNGSGHLSTITDALGNTTQVT--------TNAAGLPIAVTDPLGNTT 413 Query: 244 WCAEYDEWGNLLNEENPHQLQQLIRLP 270 A G ++ +P Sbjct: 414 -RARRGPHGRVIAITDPLGNTTRQGWT 439 Score = 50.2 bits (118), Expect = 2e-04, Method: Composition-based stats. Identities = 42/223 (18%), Positives = 62/223 (27%), Gaps = 28/223 (12%) Query: 9 RDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVES 68 AHY + YD RLTE T+ Y YD+ L T A Sbjct: 493 DGAHYTFTYDTELRLTEVTN---------PQGSQWHYTYDAAGHLTAETDFNGATR---- 539 Query: 69 RYLYDPLGRRVAKRVWRRERDLTGWMSLSR--------KPQVTWYGWDGD-RLTTIQNDR 119 Y D GR A+ E + R ++T Y +D + LT ND Sbjct: 540 TYERDAAGRLTARTNALGETLRYTLDATGRVVAQHDESTGEMTTYTYDPNGTLTHASNDA 599 Query: 120 TRIQTIYQPGSFTPLIRVETATGE-LAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLD 178 ++ PL R+ T T A G + V+ Sbjct: 600 AQLTL-----ERDPLGRILAETVNGRTATYGYDAAGNQSHRTTPSGLTSVWTYDPTGRPS 654 Query: 179 RLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKI 221 L + + ++ + D V A + Sbjct: 655 TLTTGGHTLTFTHDAAGHETQHTTGDLTLSQSWDNVGRLATQT 697 >UniRef50_C9Y462 Putative uncharacterized protein n=1 Tax=Cronobacter turicensis RepID=C9Y462_CROTZ Length = 252 Score = 156 bits (393), Expect = 3e-36, Method: Composition-based stats. Identities = 48/109 (44%), Positives = 64/109 (58%), Gaps = 2/109 (1%) Query: 220 KIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQ--QLIRLPGQQYDEE 277 +I+ YH + GLP + +G T W ++ WG E + Q Q Q +R GQ D E Sbjct: 12 EIYWYHTELNGLPERVTDADGQTVWRGQFSTWGETERELSVPQWQVPQNLRFQGQYLDRE 71 Query: 278 SGLYYNRHRYYDPLQGRYITQDPIGLKGGWNFYQYPLNPVQYIDSMGLA 326 SGL+YN RYYDP+ GRY DPIGL GG N Y Y +P+ ++D +GLA Sbjct: 72 SGLHYNLFRYYDPVAGRYTQMDPIGLAGGINTYAYVGDPLTWVDPLGLA 120 >UniRef50_Q73C66 Wall associated protein, putative n=73 Tax=Bacillus cereus group RepID=Q73C66_BACC1 Length = 2246 Score = 155 bits (392), Expect = 3e-36, Method: Composition-based stats. Identities = 69/337 (20%), Positives = 115/337 (34%), Gaps = 32/337 (9%) Query: 14 LYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYLYD 73 Y YD+ G T+ G + + YD ++L++ Y YD Sbjct: 1789 RYEYDQAGNRTKIKHEGAGGKV-----TETNFVYDPINQLLNEALPNG----TTKSYTYD 1839 Query: 74 PLGRRVA-KRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQPGSFT 132 G R + K V + + + + Q+ +G + N + + Y Sbjct: 1840 GFGNRTSVKVVENGKETKSIAATFNEGNQLVKFGNESLTYDANGNRISDGKYKYTWNEDD 1899 Query: 133 PLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSEE 192 L+ + + D + +G + D + D Sbjct: 1900 QLVSITKQGATTPFATYKYDEDNRRIEKSVNGQVTRY----FYDGDSINPLYETDGSGNV 1955 Query: 193 SRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWG 252 R+++ S T M+++ + YH + RG +A+ + + EYD WG Sbjct: 1956 LRQYVYSTSGTRLAMKSKG--------QTLYYHYNPRGDVVAMTNQDKEVVATYEYDSWG 2007 Query: 253 NLL-NEENPHQLQQLIRLPGQQYDEESGLYYNRHRYYDPLQGRYITQDPIGLKG----GW 307 N+L ++ G YD+E G+YY RYY+P G +++ DP Sbjct: 2008 NVLKSDTKGIAADNPFGYAGYMYDKEIGMYYLVARYYNPDHGVFLSVDPDPGDEDDPITM 2067 Query: 308 NFYQYP-LNPVQYIDSMG----LASKYGHLNNGGYGA 339 N Y Y NPV D G LA G GY A Sbjct: 2068 NGYTYGDNNPVMMTDPDGHAPWLAINAGFAVYDGYKA 2104 Score = 57.9 bits (138), Expect = 8e-07, Method: Composition-based stats. Identities = 37/254 (14%), Positives = 66/254 (25%), Gaps = 37/254 (14%) Query: 3 PDNRIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYA 62 N++ + + YD +G + ++Y ++ +LV T+ Sbjct: 1865 EGNQLVKFGNESLTYDANGNRIS--------------DGKYKYTWNEDDQLVSITKQGAT 1910 Query: 63 EPLVESRYLYDPLGRRVAKRVWRR----------ERDLTGWMSLSRKPQVTWYGWDGDRL 112 P Y YD RR+ K V + L + Y G RL Sbjct: 1911 TPFAT--YKYDEDNRRIEKSVNGQVTRYFYDGDSINPLYETDGSGNVLRQYVYSTSGTRL 1968 Query: 113 TTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPV 172 +T + P V T + + D+ D + Sbjct: 1969 AMKSKGQTLYYH------YNPRGDVVAMTNQDKEVVATYEYDSWGNVLKSDTKGIAADNP 2022 Query: 173 LVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLP 232 + EI + L+V+ D T + P Sbjct: 2023 FGYAGYMYDKEIGMYYLVARYYNPDHGVFLSVDPDPGDEDDPITMNGYTY-----GDNNP 2077 Query: 233 LALVSTEGATEWCA 246 + + +G W A Sbjct: 2078 VMMTDPDGHAPWLA 2091 Score = 50.6 bits (119), Expect = 1e-04, Method: Composition-based stats. Identities = 39/275 (14%), Positives = 77/275 (28%), Gaps = 38/275 (13%) Query: 9 RDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVES 68 + YD G +TD + T Y Y+ + L T Sbjct: 1517 EGQKNTFTYDASGNKKSETD---------EKGNTKLYDYNKDNLLTKVTLKNGTS----V 1563 Query: 69 RYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVT------------WYGWDGDRLTTIQ 116 Y YD G K V + T + T Y + +++ T Sbjct: 1564 NYRYDHNGNTTEKSVMFGGKTQTHKYEYDVDNKNTVYIDALNRRIENTYDENANKIKTKM 1623 Query: 117 NDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQM 176 + + ++++Y RV + Q + +D + V Sbjct: 1624 PNGSILESVYDTAD-----RVIGEKRNGKDSFTFERDQNGQVTKVKDHVNGVERTKTYDK 1678 Query: 177 LDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHL-YHC-DHRGLPLA 234 DR+ + R + + E+++ Q K+ Y+ D + Sbjct: 1679 ADRV-TSATDSRGGKVDWAYHDKANSKTEKLKEQTVTQGGYTNKVSYDYNTLDQN---IR 1734 Query: 235 LVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRL 269 + G+ + +YD+ GN+ + Sbjct: 1735 VTD--GSQTYRFDYDDQGNVRTYTAGNGSGSTFNY 1767 Score = 48.6 bits (114), Expect = 6e-04, Method: Composition-based stats. Identities = 34/235 (14%), Positives = 78/235 (33%), Gaps = 30/235 (12%) Query: 7 IARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLV 66 + YRYD +G TEK+ + +TH+Y YD + Sbjct: 1557 LKNGTSVNYRYDHNGNTTEKSVMFG------GKTQTHKYEYDVDN--------------K 1596 Query: 67 ESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTIY 126 + Y+ D L RR+ + + + + Y DR+ + + + Sbjct: 1597 NTVYI-DALNRRIE-NTYDENANKIKTKMPNGSILESVYD-TADRVIGEKRNGKDS-FTF 1652 Query: 127 QPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILA 186 + + +V+ + +T+ AD + + GG V + ++E L Sbjct: 1653 ERDQNGQVTKVKDHVNGVERTKTYDKADRVTSATDSRGGKVDWAY---HDKANSKTEKLK 1709 Query: 187 DRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGA 241 ++ + + ++ + + T + + + D +G + G+ Sbjct: 1710 EQTVTQGG---YTNKVSYDYNTLDQNIRVTDGSQTYRFDYDDQGNVRTYTAGNGS 1761 Score = 45.9 bits (107), Expect = 0.004, Method: Composition-based stats. Identities = 40/294 (13%), Positives = 85/294 (28%), Gaps = 44/294 (14%) Query: 12 HYLYRYDRHGRLTE-----------KTDLIPEGVIRT--DDERTHRYHYDSQHRLVHYTR 58 Y YD RL++ + D + +R D +T ++YD LV T Sbjct: 905 TTTYEYDGESRLSKVKNASGKELVVQYDGNNKKAVRVIGPDNKTLTFNYDG-DFLVSSTT 963 Query: 59 TQYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQND 118 + +Y YD + KP T Y ++ +RL + + Sbjct: 964 PEG----KVYKYGYDN----------GLLTSIYDPQHTDAKPYKTSYAYENNRLVKVTDP 1009 Query: 119 RTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLD 178 + T+ ++ + T T + + D + + + Sbjct: 1010 LGKATTL----AYNTDTKEVTLTNPKGRKTVYTYNDAGNPVKTVEDVGRLNLTTSYEYNA 1065 Query: 179 RLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCD----------- 227 + + E+ + + +T + + + D Sbjct: 1066 NNLVKTTTPKNQTETATYDGNGNVTSVTDEMGTEKFEYNKDNGLIKATDNENRETTVAYK 1125 Query: 228 HRGLPLALVSTEGATEWCAEYDEWGNLLNEENP-HQLQQLIRLPGQQYDEESGL 280 ++ T +YD++GN + + LI+ P + D +G Sbjct: 1126 AANTEVSETDQAANTSSFMQYDQFGNPIETTRELGTGENLIQNPSFEMDITNGW 1179 Score = 41.7 bits (96), Expect = 0.063, Method: Composition-based stats. Identities = 36/245 (14%), Positives = 68/245 (27%), Gaps = 41/245 (16%) Query: 18 DRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYLYDPLGR 77 D GR+ D T Y YD + RL E +V+ YD Sbjct: 890 DAQGRIQYTKDKY---------GNTTTYEYDGESRLSKVKNASGKELVVQ----YD---- 932 Query: 78 RVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRI-QTIYQPGSFTPLIR 136 + + + + +DGD L + ++ + Y G T + Sbjct: 933 ---------GNNKKAVRVIGPDNKTLTFNYDGDFLVSSTTPEGKVYKYGYDNGLLTSIYD 983 Query: 137 VETATGELAKTQRRSLADTLQQSGGEDGGS------------VVFPPVLVQMLDRLESEI 184 + + KT + L + G + + P + + Sbjct: 984 PQHTDAKPYKTSYAYENNRLVKVTDPLGKATTLAYNTDTKEVTLTNPKGRKTVYTYNDAG 1043 Query: 185 LADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEW 244 + E+ R + + E N + TP + D G ++ G ++ Sbjct: 1044 NPVKTVEDVGR--LNLTTSYEYNANNLVKTTTPKNQTETATYDGNGNVTSVTDEMGTEKF 1101 Query: 245 CAEYD 249 D Sbjct: 1102 EYNKD 1106 >UniRef50_B5S3N8 Rhs-related protein n=1 Tax=Ralstonia solanacearum RepID=B5S3N8_RALSO Length = 1714 Score = 155 bits (392), Expect = 3e-36, Method: Composition-based stats. Identities = 71/362 (19%), Positives = 113/362 (31%), Gaps = 80/362 (22%) Query: 8 ARDAHYLYRYDRHGRLTEKTDLIP----------------------EGVIRTDDERTHRY 45 Y YD T T + ++ +Y Sbjct: 1308 RSWNDRRYSYDAADNRTSATSRTAKQTIVPNALNQMQTVNGQPTQYDAAGNLLEDEARQY 1367 Query: 46 HYDSQHRLVHYTRTQYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWY 105 +D++HRL+ A E+R+ YD LGRR E D TG T Y Sbjct: 1368 DWDAEHRLIRIRYKAQAGK--ETRFGYDGLGRRT----VITEVDGTGTTE-------THY 1414 Query: 106 GWDGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGG 165 W G+ + ++ ++ Y P +R + AD ++ + Sbjct: 1415 VWCGEAICQKRDANGQLLRAYYP----------EGESGPEIGKRVAKADAGTETDADGDE 1464 Query: 166 SVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYH 225 ++E + Y Sbjct: 1465 HDGRGQDGDDGKSAPQTESTGSLI----------------------------------YA 1490 Query: 226 CDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEESGLYYNRH 285 +H G ++ +G EY +G L+ + + + G QY SG+Y Sbjct: 1491 RNHLGSVTDTLTPDGRAVTHTEYGPYGELVKSQGRAEYRSDFGYAGMQYHAASGMYLTLF 1550 Query: 286 RYYDPLQGRYITQDPIGLKGGWNFYQYPL-NPVQYIDSMGLASKYGHLNNGGYGARPNKP 344 R YDP GR++++DPIG +GG+N Y Y NP+ Y D G G L G+ Sbjct: 1551 RAYDPGTGRWVSRDPIGERGGFNLYGYVNGNPIGYRDPRGTNPLTGALTGAEIGSIAGPI 1610 Query: 345 PT 346 T Sbjct: 1611 GT 1612 Score = 63.7 bits (153), Expect = 2e-08, Method: Composition-based stats. Identities = 49/291 (16%), Positives = 84/291 (28%), Gaps = 49/291 (16%) Query: 15 YRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVES------ 68 Y YD GR+ +TD + RT +Y YD+ +RL Sbjct: 873 YAYDAIGRIASQTDS---------EGRTVKYQYDALNRLTLTQYPDGTTRRQTWDKLDLA 923 Query: 69 ----------RYLY----------DPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWD 108 RY Y DPLGRR+ + + T + TW Sbjct: 924 STTDRLGRVTRYTYDSARRLVQVTDPLGRRIQYGYYPNGKLKTLTDAAGNV--TTWQRDI 981 Query: 109 GDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVV 168 R+ + + T+ + + L R+ A G+ +KT ++ D + + + Sbjct: 982 QGRVISKTYADGKGDTLAYEATTSRLKRITDALGQ-SKTFSYTMDDRVAELDYSGATNPT 1040 Query: 169 FPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDH 228 + D + + A ++ + P + + D Sbjct: 1041 ASVSYRYDSAYPRISSVTDGTGSHNYSYNAVGSPGANRVSEETVPGQSDTLRTQY---DA 1097 Query: 229 RGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEESG 279 G P G+ YD G + P Y E+G Sbjct: 1098 LGRPTE--RRIGSLSETWSYDALGRQVGHGTPLG---QFSYA---YLGETG 1140 Score = 51.3 bits (121), Expect = 8e-05, Method: Composition-based stats. Identities = 57/299 (19%), Positives = 89/299 (29%), Gaps = 60/299 (20%) Query: 6 RIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPL 65 R A Y Y+ G+ T +T+ + +T R+ YD+ L A Sbjct: 821 RDAAGQLTTYTYNAAGQQTGETNAL---------GQTTRWEYDANGFLQRVV---NANGK 868 Query: 66 VESRYLYDPLGR---------RVAKRVWRRERDLTGWM------------------SLSR 98 + Y YD +GR R K + LT + R Sbjct: 869 TAASYAYDAIGRIASQTDSEGRTVKYQYDALNRLTLTQYPDGTTRRQTWDKLDLASTTDR 928 Query: 99 KPQVTWYGWD-GDRLTTIQND-RTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTL 156 +VT Y +D RL + + RIQ Y P L + A G + QR + Sbjct: 929 LGRVTRYTYDSARRLVQVTDPLGRRIQYGYYPN--GKLKTLTDAAGNVTTWQRDIQGRVI 986 Query: 157 QQSGGEDGGSVVFPPVLVQMLDRLE---------SEILADRVSEESRRWLASCGLTVEQM 207 ++ + G + L R+ S + DRV+E + +V Sbjct: 987 SKTYADGKGDTLAYEATTSRLKRITDALGQSKTFSYTMDDRVAELDYSGATNPTASVSYR 1046 Query: 208 QNQMDP---VYTPARKIHLYHCDHRGLP-----LALVSTEGATEWCAEYDEWGNLLNEE 258 + P T H Y + G P + +YD G Sbjct: 1047 YDSAYPRISSVTDGTGSHNYSYNAVGSPGANRVSEETVPGQSDTLRTQYDALGRPTERR 1105 Score = 41.3 bits (95), Expect = 0.071, Method: Composition-based stats. Identities = 38/277 (13%), Positives = 75/277 (27%), Gaps = 43/277 (15%) Query: 26 KTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYLY------------- 72 + + + + R + T YDSQ RL T + + Y Sbjct: 521 RRVFLTQIIDREGNAVT--LSYDSQQRLTAITDAAG----KRTTFTYGNASNSTLVTQIT 574 Query: 73 DPLGR--RVAKRVWRRERDLTGWMSLSRKPQVTWYGWD-GDRLTTIQNDRTRIQTIYQPG 129 DP GR R+ R D+T + + + +D G + + + Y Sbjct: 575 DPFGRTARLGYDASGRLSDITDAIGMKSS-----FSYDAGTFINALTTPYGTTKFAYGEN 629 Query: 130 SFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGG------SVVFPPVLVQMLDRLESE 183 I + G+ + + R A L + + G + + ++ Sbjct: 630 GVQRWINITNPQGQTERVEYRHQAPGLSYTESQTPGGMSVFNTFINYRNTFYWNADAYAQ 689 Query: 184 ILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDH----RGLPLA----- 234 D WL + + + + R + Y G Sbjct: 690 APDDYTKARITHWLHTNNINMTAGAIESTKAPLENRVWYTYANQPFPAGVGSTEQPTAVA 749 Query: 235 -LVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRLP 270 ++ Y+ GN+ + + Q L Sbjct: 750 RVLDDGSTQLMRTSYNAQGNVTAQSDAVGRQALYDYA 786 >UniRef50_B2PW78 Putative uncharacterized protein n=1 Tax=Providencia stuartii ATCC 25827 RepID=B2PW78_PROST Length = 330 Score = 155 bits (391), Expect = 3e-36, Method: Composition-based stats. Identities = 50/243 (20%), Positives = 100/243 (41%), Gaps = 15/243 (6%) Query: 124 TIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESE 183 Y+ ++ +I ++ +T + + L + D + L + + ++ Sbjct: 15 WQYRHDAYGNVI-SRGHPNQVKQTYQYDGDNRLVIAQTSDMKAQYHYDALGRRIHKVVES 73 Query: 184 ILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATE 243 +++ ++ +++ + T + + Y PL + + +G T Sbjct: 74 RAHGKLTRHETHFVWQGLRLLQEQD-----INTGKCQTYCYEEHGSYTPLDVTNEQGNTV 128 Query: 244 WCAEYDEWGNLLN---------EENPHQLQQLIRLPGQQYDEESGLYYNRHRYYDPLQGR 294 W +Y+ +G + + + +Q +R GQ +D E+GL++N R+YDP GR Sbjct: 129 WSGKYERFGFVRSSPLSFYSDPDRKMESFEQNLRYAGQYFDNETGLHFNTFRFYDPQIGR 188 Query: 295 YITQDPIGLKGGWNFYQYPLNPVQYIDSMGLASKYGHLNNGGYGARPNKPPTPDPSKLPD 354 +I DPIGL GG N Y Y NP+ ++D GL + Y +N Y + P + Sbjct: 189 FIMPDPIGLLGGMNLYAYAPNPMSWVDPFGLMTLYRGMNISEYESLMKTGTWTSPPNALE 248 Query: 355 IAK 357 Sbjct: 249 GKW 251 Score = 81.4 bits (199), Expect = 7e-14, Method: Composition-based stats. Identities = 34/132 (25%), Positives = 52/132 (39%), Gaps = 24/132 (18%) Query: 6 RIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPL 65 R + + YR+D +G + + ++ Y YD +RLV + Sbjct: 8 RQLQFQGWQYRHDAYGNVISRGH---------PNQVKQTYQYDGDNRLVIAQTSD----- 53 Query: 66 VESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQ--NDRTRIQ 123 ++++Y YD LGRR+ K V R T + W G RL Q N Sbjct: 54 MKAQYHYDALGRRIHKVVESRAHGKLTRHE-------THFVWQGLRLLQEQDINTGKCQT 106 Query: 124 TIYQP-GSFTPL 134 Y+ GS+TPL Sbjct: 107 YCYEEHGSYTPL 118 >UniRef50_D1YPP7 RHS repeat-associated core domain protein n=1 Tax=Veillonella parvula ATCC 17745 RepID=D1YPP7_9FIRM Length = 237 Score = 154 bits (390), Expect = 4e-36, Method: Composition-based stats. Identities = 41/110 (37%), Positives = 56/110 (50%), Gaps = 1/110 (0%) Query: 219 RKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEEN-PHQLQQLIRLPGQQYDEE 277 ++ H +HC+ G+P + EG W EY W L Q RL Q D E Sbjct: 10 QQTHYFHCNQIGIPREMTDKEGNLFWYVEYTIWARLKEATKVTDSAHQPFRLQNQYADRE 69 Query: 278 SGLYYNRHRYYDPLQGRYITQDPIGLKGGWNFYQYPLNPVQYIDSMGLAS 327 +GL+YN RYY+P GR++ QDPIGL G N YQ+ N ++D +G Sbjct: 70 TGLHYNLMRYYEPEAGRFVNQDPIGLWGEENLYQFAPNATMWLDPLGWKG 119 >UniRef50_Q2PC71 Putative uncharacterized protein Rub7 n=1 Tax=Streptomyces achromogenes subsp. rubradiris RepID=Q2PC71_STRAH Length = 1096 Score = 154 bits (390), Expect = 5e-36, Method: Composition-based stats. Identities = 75/337 (22%), Positives = 104/337 (30%), Gaps = 74/337 (21%) Query: 10 DAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLV--------------- 54 +R D GR+T T D + +Y +D +V Sbjct: 748 TGDRTFRLDSAGRVTAVTGRR--------DAWSEQYDFDPAGNIVDALWPAPAAGSAAGT 799 Query: 55 --------HYTRTQYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYG 106 T + RY YD GR V + R D P Y Sbjct: 800 PETSAQGPRATDGTLTTRAGDIRYRYDAAGRVVTRTRTRASGD----------PDTWRYA 849 Query: 107 WDGD-RLTTIQN-DRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDG 164 WD D RL ++ D + Q Y P L + + Sbjct: 850 WDADSRLHSVTLPDGSTWQYHYDP-----------------------LGRRIGKRHLAAD 886 Query: 165 GSVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARK---- 220 G ++ D L + + W V Q V A + Sbjct: 887 GRLLGQTQFTWDGDVLVEQEDRHGDCRKVTTWNYRNDSCVPLTQASRTVVRVDAEREETD 946 Query: 221 --IHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEES 278 H D G+P LVS +GA Y WG + +R PGQ D+E+ Sbjct: 947 EEFHSVVTDLNGMPTELVSPDGAVAGHQRYTWWGQSSWQHGTATT--PLRFPGQYCDQET 1004 Query: 279 GLYYNRHRYYDPLQGRYITQDPIGLKGGWNFYQYPLN 315 GL+Y RYYDP G Y++ DP+GL N + Y N Sbjct: 1005 GLHYENQRYYDPEIGAYLSPDPLGLAPASNPHAYVPN 1041 Score = 57.9 bits (138), Expect = 9e-07, Method: Composition-based stats. Identities = 46/274 (16%), Positives = 75/274 (27%), Gaps = 33/274 (12%) Query: 13 YLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYLY 72 + YD G L+ + R+ YD RL +T Y + Sbjct: 194 RRFEYDDSGNLS---------GVVNSSGLPRRFTYDDMGRLTGWTDRNG----YSYHYTF 240 Query: 73 DPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQPGSFT 132 D GR V T T DGD T N+ + + P T Sbjct: 241 DSEGRCVRGEGPDGVLSGTFVYEPGVTRWTTT---DGDVTTYAINESAHVVAVTDPIGKT 297 Query: 133 PLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSEE 192 + + +T + SV P + ++ + + + Sbjct: 298 TRTQYDERGRVTVRTDPLDRVTRHAYDERGNLVSVTDPAGHEYHVYVNDACLPERITAPD 357 Query: 193 SRRWLAS----CGLTVEQMQNQMDPVYTPARKIHL------------YHCDHRGLPLALV 236 WL LT + + Y + HL CD GLP+A+ Sbjct: 358 GTVWLQDFDKNGNLTEQTAPDGSVLTYAYDSRGHLSRMTGADGAVTTIACDPAGLPVAVT 417 Query: 237 STEGATEWCAEYDEWGNLLNEENPHQLQQLIRLP 270 G T E D+ G ++ + + Sbjct: 418 KPTGETI-RYERDQLGRVVRVMSSDGGTTALTWT 450 Score = 49.8 bits (117), Expect = 2e-04, Method: Composition-based stats. Identities = 54/314 (17%), Positives = 86/314 (27%), Gaps = 61/314 (19%) Query: 8 ARDAHYLYRYDRHGRLTEKTDLIPEGVIRTD----------DERTHRYHYDSQHRLVHYT 57 A + +D GRL + + V+ D + RT YD+ R+ Sbjct: 586 AEGTETTFAHDPAGRLVRAKNDDVDLVLVRDPLGRVITESCNGRTVTKTYDAAGRVTSRV 645 Query: 58 RTQYAEPLV----------------ESRYLYDPLGRRVAKRVWRRERDLTGWMSLSR--- 98 A E R+ +DP GR + + W R Sbjct: 646 TPSGASTSWSYDADGTPSLLTADGHELRFGHDPAGRETRRDLPGGVVLTQEWDHNGRLVT 705 Query: 99 ---KPQVTWYGWDGDRLTTIQNDRTRIQTIYQPG----------SFTPLIRVETATGELA 145 G DG +T R Y P + R+++A A Sbjct: 706 QALTGSAAASGPDGPVVTG--QPLQRRAYTYSPDGSVAGRQDLLTGDRTFRLDSAGRVTA 763 Query: 146 KTQRRSLADTLQQ-----------SGGEDGGSVVFPPVLVQMLDRLESEILADRVSEESR 194 T RR GS P R L R + Sbjct: 764 VTGRRDAWSEQYDFDPAGNIVDALWPAPAAGSAAGTPETSAQGPRATDGTLTTRAGDIRY 823 Query: 195 RWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNL 254 R+ A+ G V + + + R Y D ++ +G+T W YD G Sbjct: 824 RYDAA-GRVVTRTRTRASGDPDTWR----YAWDADSRLHSVTLPDGST-WQYHYDPLGRR 877 Query: 255 LNEENPHQLQQLIR 268 + + + +L+ Sbjct: 878 IGKRHLAADGRLLG 891 Score = 49.0 bits (115), Expect = 4e-04, Method: Composition-based stats. Identities = 47/255 (18%), Positives = 67/255 (26%), Gaps = 45/255 (17%) Query: 17 YDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYA-------------- 62 +D++G LTE+T D Y YDS+ L T A Sbjct: 365 FDKNGNLTEQT---------APDGSVLTYAYDSRGHLSRMTGADGAVTTIACDPAGLPVA 415 Query: 63 ---EPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTW-------YGWDGDRL 112 RY D LGR V W + T + WDG+ Sbjct: 416 VTKPTGETIRYERDQLGRVVRVMSSDGGTTALTWTTDGLPTSRTLPDGSTDSWAWDGEEN 475 Query: 113 TTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPV 172 + T T Y G F L+ + G + S + G + F Sbjct: 476 LQRRTSATGAVTSYAYGPFGQLMSITWPGGTRTELTYDRSCRVT--SVTQSGMTWEFELE 533 Query: 173 LVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDP---VYTPARKIHLYHCDHR 229 L D ++ W + G V ++ Y P K+ H Sbjct: 534 SAGRLSAQ-----TDYNGATTQYWYDAAGQLVHRVNASGHEASFAYNPLGKLAYSHT-AE 587 Query: 230 GL-PLALVSTEGATE 243 G G Sbjct: 588 GTETTFAHDPAGRLV 602 Score = 45.2 bits (105), Expect = 0.005, Method: Composition-based stats. Identities = 42/266 (15%), Positives = 72/266 (27%), Gaps = 45/266 (16%) Query: 9 RDAHYLYRYDRHGRLTEKTDLIPEGV------------IRTDDERTHRYHYDSQHRLVHY 56 A Y YD G+L + + T + + +D RLV Sbjct: 545 NGATTQYWYDAAGQLVHRVNASGHEASFAYNPLGKLAYSHTAEGTETTFAHDPAGRLVRA 604 Query: 57 TRTQYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQ 116 LV DPLGR + S + + Y G + + Sbjct: 605 KNDDVDLVLVR-----DPLGRVI-------------TESCNGRTVTKTYDAAGRVTSRVT 646 Query: 117 NDRTRIQTIYQPGSFTPLIRVETA-----TGELAKTQRRSLADT--LQQSGGEDGGSVVF 169 Y L+ + + RR L L Q +G V Sbjct: 647 PSGASTSWSYDADGTPSLLTADGHELRFGHDPAGRETRRDLPGGVVLTQEWDHNGRLVTQ 706 Query: 170 PPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHR 229 + ++ + + R + S +V Q+ + T + D Sbjct: 707 ALTGSAAASGPDGPVVTGQPLQR-RAYTYSPDGSVAGRQDLLTGDRT-------FRLDSA 758 Query: 230 GLPLALVSTEGATEWCAEYDEWGNLL 255 G A+ A ++D GN++ Sbjct: 759 GRVTAVTGRRDAWSEQYDFDPAGNIV 784 Score = 42.5 bits (98), Expect = 0.031, Method: Composition-based stats. Identities = 53/265 (20%), Positives = 85/265 (32%), Gaps = 56/265 (21%) Query: 12 HYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYL 71 +YD GR+T +TD + +R R+ YD + LV T E V Y+ Sbjct: 297 TTRTQYDERGRVTVRTDPL---------DRVTRHAYDERGNLVSVTDPAGHEYHV---YV 344 Query: 72 YDP-LGRRVAK---RVWRRERDLTGWMSLSRKPQ--VTWYGWDGD-RLTTIQNDRTRIQT 124 D L R+ VW ++ D G ++ P V Y +D L+ + + T Sbjct: 345 NDACLPERITAPDGTVWLQDFDKNGNLTEQTAPDGSVLTYAYDSRGHLSRMTGADGAVTT 404 Query: 125 IYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEI 184 I + P+ V TGE + +R L ++ + G + L D L + Sbjct: 405 IACDPAGLPVA-VTKPTGETIRYERDQLGRVVRVMSSDGGTT-----ALTWTTDGLPTSR 458 Query: 185 LADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEW 244 S +S W L S GA Sbjct: 459 TLPDGSTDSWAWDGEENL------------------------------QRRTSATGAVT- 487 Query: 245 CAEYDEWGNLLNEENPHQLQQLIRL 269 Y +G L++ P + + Sbjct: 488 SYAYGPFGQLMSITWPGGTRTELTY 512 >UniRef50_C0FSB7 Putative uncharacterized protein n=1 Tax=Roseburia inulinivorans DSM 16841 RepID=C0FSB7_9FIRM Length = 306 Score = 154 bits (389), Expect = 6e-36, Method: Composition-based stats. Identities = 67/301 (22%), Positives = 100/301 (33%), Gaps = 66/301 (21%) Query: 53 LVHYTRTQYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRL 112 L R R+ YD GRR K V + ++ +V + W+G+ Sbjct: 2 LKEVIRPD----QSAIRFKYDAFGRRTEKVVTGK-----------KREKVIRFLWNGNM- 45 Query: 113 TTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPV 172 + + + P ++VE + + R Q++G + +++ Sbjct: 46 -----PFHEWEEMREADRKQPKVKVEYQADFMQRLAEREAEKARQKAGQKQPENLI---- 96 Query: 173 LVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLP 232 W+ + + D+ G P Sbjct: 97 ----------------------TWVFQDDFIPRGKLTRTGN--------YSIISDYLGTP 126 Query: 233 LALVSTEGATEWCAEYDEWGNLLNE----------ENPHQLQQLIRLPGQQYDEESGLYY 282 + EG W E D +G + N E Q R GQ D+E GLYY Sbjct: 127 VEAYDGEGIKVWERELDIYGRVKNVGKGSDRSAAPETGEQCFIPFRFQGQYEDKEIGLYY 186 Query: 283 NRHRYYDPLQGRYITQDPIGLKGG-WNFYQYPLNPVQYIDSMGLASKYGHLNNGGYGARP 341 NR RYYDP G+Y QDPIGL GG Y Y N + +D GL K G+ P Sbjct: 187 NRFRYYDPSLGQYTQQDPIGLAGGNPTLYGYVFNTMWELDPFGLDWKDLLETGLGHHLFP 246 Query: 342 N 342 Sbjct: 247 G 247 >UniRef50_UPI000196E06E Rhs family protein n=2 Tax=Neisseria mucosa ATCC 25996 RepID=UPI000196E06E Length = 280 Score = 154 bits (389), Expect = 6e-36, Method: Composition-based stats. Identities = 46/142 (32%), Positives = 70/142 (49%), Gaps = 1/142 (0%) Query: 185 LADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEW 244 + + + S ++ + + E + D + + +H D G+P + G W Sbjct: 1 MQEYTYKGSYTYIYTDQDSYEPLAQVFDNAKDGKQYLAYFHTDQIGIPREMTDIHGNLLW 60 Query: 245 CAEYDEWGNLLNEENPHQ-LQQLIRLPGQQYDEESGLYYNRHRYYDPLQGRYITQDPIGL 303 EY WG L +E ++ Q RL Q YDEE+GL+YN RYY+P GR++ QDPI L Sbjct: 61 YGEYTAWGRLKKDECVYRNAHQPFRLQNQYYDEETGLHYNLMRYYEPEAGRFVNQDPILL 120 Query: 304 KGGWNFYQYPLNPVQYIDSMGL 325 GG N Y + N + D +GL Sbjct: 121 LGGSNLYSFASNTNAWFDPLGL 142 >UniRef50_C8W2T8 YD repeat protein n=2 Tax=Desulfotomaculum acetoxidans DSM 771 RepID=C8W2T8_DESAS Length = 2349 Score = 154 bits (388), Expect = 9e-36, Method: Composition-based stats. Identities = 62/293 (21%), Positives = 110/293 (37%), Gaps = 44/293 (15%) Query: 42 THRYHYDSQHRLVHYTRTQYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQ 101 TH + YD+ RL +T + V+ Y YD G + K + + + Sbjct: 1954 THSFSYDADGRLASWTHS-----GVQQNYTYDAAGNLLTK--------GNRTFAYNNINE 2000 Query: 102 VTWYGWDGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGG 161 +T G+ D+ + D + Y L+RV + D +++ Sbjct: 2001 ITSPGFTYDQNGNMTGDGS---FNYTYNPLNQLVRVNKVSDGSLVATYTYNHDGTRRNKV 2057 Query: 162 EDGGSVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKI 221 G+ + ++ + + + + G + + ++ Sbjct: 2058 TAQGTTNYN-------WDASGNLIREIGPNGTYCYYYALGKLIA---------FENNHQL 2101 Query: 222 HLYHCDHRGLPLA--LVSTEGAT--EWCAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEE 277 ++ H + RG ++ + G T E +YD WG + E+ ++ R G YDEE Sbjct: 2102 YIVHDNLRGDVISLSMTDDYGNTDQENRYDYDPWGTPICED--ESVKLPFRYAGYYYDEE 2159 Query: 278 SGLYYNRHRYYDPLQGRYITQDPIGLKG-----GWNFYQYP-LNPVQYIDSMG 324 +GLYY + RYY P GR++T+D N Y Y NPV Y+D G Sbjct: 2160 TGLYYLKSRYYSPALGRFLTRDDHSFINHADPQTLNLYAYCGNNPVNYVDPDG 2212 Score = 57.5 bits (137), Expect = 1e-06, Method: Composition-based stats. Identities = 45/288 (15%), Positives = 77/288 (26%), Gaps = 35/288 (12%) Query: 5 NRIA-----RDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRT 59 NR++ ++ Y YDR G LT I + ++ YD+ +RL + Sbjct: 1742 NRLSALTDSQNQSATYTYDRSGNLT---------GIALPNGQSESLEYDNANRLTRIILS 1792 Query: 60 QYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTW-YGWD-------GDR 111 Y YD G ++ + R T +G+ + Sbjct: 1793 DGKY----YNYYYDGAGELISVTDQNGAGCSWNYDGAHRVTSTTDPFGYQLNYSLDKSNN 1848 Query: 112 LTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPP 171 L Y G+ + R + +V Sbjct: 1849 LELESGIDYSCHYYYDGGNNMY----KLYLPGAIIYYGRDDQGRVFNVEYNPSYTVNHQL 1904 Query: 172 VLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGL 231 + + S + + + G + + Y+ H + D G Sbjct: 1905 HYATSQRIINYLVNGWCSSIQDQYFPYRTGYSYGYYADGTISGYSSWNGTHSFSYDADG- 1963 Query: 232 PLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQL---IRLPGQQYDE 276 T + YD GNLL + N I PG YD+ Sbjct: 1964 -RLASWTHSGVQQNYTYDAAGNLLTKGNRTFAYNNINEITSPGFTYDQ 2010 Score = 43.6 bits (101), Expect = 0.015, Method: Composition-based stats. Identities = 34/219 (15%), Positives = 64/219 (29%), Gaps = 29/219 (13%) Query: 15 YRYDRH-GRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYLYD 73 Y Y+ + G D + + T Y YD+ +RL+ T ++ Y YD Sbjct: 1665 YAYNPNVGNTVGHADPL--------NHITWYY-YDALNRLIQVTDPL----SRKAYYQYD 1711 Query: 74 PLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQPGSFTP 133 P+ + R R S T+YG + + D Y Sbjct: 1712 PVSNLIYTRDPRSASS-------SDNTYSTFYGPNNLNRLSALTDSQNQSATYTYDRSGN 1764 Query: 134 LIRVETATGELAKTQRRS--------LADTLQQSGGEDGGSVVFPPVLVQMLDRLESEIL 185 L + G+ + + L+D + DG + + Sbjct: 1765 LTGIALPNGQSESLEYDNANRLTRIILSDGKYYNYYYDGAGELISVTDQNGAGCSWNYDG 1824 Query: 186 ADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLY 224 A RV+ + + ++++ N + Y Sbjct: 1825 AHRVTSTTDPFGYQLNYSLDKSNNLELESGIDYSCHYYY 1863 Score = 43.6 bits (101), Expect = 0.016, Method: Composition-based stats. Identities = 41/252 (16%), Positives = 68/252 (26%), Gaps = 33/252 (13%) Query: 73 DPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDG-DRLTTIQNDRTRIQTIYQPGSF 131 D LG + +TWY +D +RL + + +R YQ Sbjct: 1657 DALG--IQNAYAYNPNVGNTVGHADPLNHITWYYYDALNRLIQVTDPLSRKAY-YQYDPV 1713 Query: 132 TPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSE 191 + LI + S + DR + + Sbjct: 1714 SNLIYTRDPRSASSSDNTYSTFYGPNNLNRLSALTDSQNQSATYTYDRSGNLTGIALPNG 1773 Query: 192 ESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEW 251 +S + ++ K + Y+ D G +++ GA YD Sbjct: 1774 QSESLEYDNANRLTRIILSD-------GKYYNYYYDGAGELISVTDQNGA-GCSWNYD-- 1823 Query: 252 GNLLNEENPHQLQQLIRLP---GQQYDEESGLYYNRHRYYDPLQGRYITQDPIGLKGGWN 308 G + + ESG+ Y+ H YYD GG N Sbjct: 1824 GAHRVTSTTDPFGYQLNYSLDKSNNLELESGIDYSCHYYYD---------------GGNN 1868 Query: 309 FYQ-YPLNPVQY 319 Y+ Y + Y Sbjct: 1869 MYKLYLPGAIIY 1880 Score = 42.9 bits (99), Expect = 0.028, Method: Composition-based stats. Identities = 40/259 (15%), Positives = 79/259 (30%), Gaps = 34/259 (13%) Query: 13 YLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYLY 72 Y YD GR+ D +++ Y Q+ L T ++ Y Sbjct: 1056 ITYTYDPVGRIVNVID---------PGGHAYQFGY--QNNLTSVTDPANNTYVL----SY 1100 Query: 73 DPLG---------RRVAKRVWRRERDLTGWMSLSRKPQ-----VTWYGWDGDRL-TTIQN 117 D G RV L + Q + G+ + TTI + Sbjct: 1101 DANGHLASFTDPLNRVTTFNINSGGQLLSYNDARTNGQDVYTTTFSHSLQGNTMVTTITD 1160 Query: 118 DRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQML 177 +R T Y S LI+ + G + + L Q+ G + + M+ Sbjct: 1161 PGSRTNTYYHNTSTGNLIKKQDGIGNTWSYTWTN--NNLTQAQDTKGTTSYQYDNMGNMI 1218 Query: 178 DRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVS 237 + + + ++ + + + ++ + R+I+ + G L+ Sbjct: 1219 QKTIT-VDSNPANNIVETMTYNSNSELLTRKDNSNYNNNNGREINYKYSSE-GNLLSTSD 1276 Query: 238 TEGATEWCAEYDEWGNLLN 256 YD+ GN++ Sbjct: 1277 PNEKVSSSYSYDQRGNIIQ 1295 Score = 41.7 bits (96), Expect = 0.066, Method: Composition-based stats. Identities = 18/113 (15%), Positives = 35/113 (30%), Gaps = 11/113 (9%) Query: 2 WPDNRIARDAHYL----YRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYT 57 W +N + + Y+YD G + +KT + + Y+S L+ Sbjct: 1192 WTNNNLTQAQDTKGTTSYQYDNMGNMIQKTITVDS---NPANNIVETMTYNSNSELLTRK 1248 Query: 58 --RTQYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWD 108 E Y Y G ++ ++ S ++ + Y D Sbjct: 1249 DNSNYNNNNGREINYKYSSEGNLLS--TSDPNEKVSSSYSYDQRGNIIQYNPD 1299 Score = 40.9 bits (94), Expect = 0.096, Method: Composition-based stats. Identities = 36/254 (14%), Positives = 75/254 (29%), Gaps = 49/254 (19%) Query: 5 NRIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEP 64 N I + YD++G +T + + Y Y+ ++LV + ++ Sbjct: 1996 NNINEITSPGFTYDQNGNMT--------------GDGSFNYTYNPLNQLVRV--NKVSDG 2039 Query: 65 LVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGD-RLTTIQNDRTRIQ 123 + + Y Y+ G R K + T Y WD L Sbjct: 2040 SLVATYTYNHDGTRRNKVTAQ---------------GTTNYNWDASGNLIREIGPNGTYC 2084 Query: 124 TIYQ-------PGSFTPLIRVETATGELAK---TQRRSLADTLQQSGGEDGGSVVFPPVL 173 Y + I + G++ T D + + G+ + Sbjct: 2085 YYYALGKLIAFENNHQLYIVHDNLRGDVISLSMTDDYGNTDQENRYDYDPWGTPICEDES 2144 Query: 174 VQMLDRLESEILADRVSEE---SRRWLASCGLTVEQMQNQ-MDPVYTPARKIHLYHCDHR 229 V++ R + SR + + G + + + ++ ++ Y + Sbjct: 2145 VKLPFRYAGYYYDEETGLYYLKSRYYSPALGRFLTRDDHSFINHADPQTLNLYAYCGN-- 2202 Query: 230 GLPLALVSTEGATE 243 P+ V +G T Sbjct: 2203 -NPVNYVDPDGNTI 2215 >UniRef50_C5ID01 RhsK n=50 Tax=cellular organisms RepID=C5ID01_ECOLX Length = 1616 Score = 153 bits (387), Expect = 1e-35, Method: Composition-based stats. Identities = 85/345 (24%), Positives = 126/345 (36%), Gaps = 58/345 (16%) Query: 8 ARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDS----------QHRLVHYT 57 R+ H YR DR+G++T T DE Y YDS +HR+ T Sbjct: 1150 GRETHREYRLDRNGQVTAVTASGTGLGYGEGDE---TYGYDSCGYLKAQSAGRHRISGET 1206 Query: 58 RTQYAEP----LVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLT 113 A ++Y YD GR V++ R +P+ + WD Sbjct: 1207 DQYAAGHRLKQAGNTQYDYDAAGRMVSRTKHRD----------GYRPETERFRWDSRDQL 1256 Query: 114 TIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVL 173 T Q Y +T++R ++ + DG S+ Sbjct: 1257 TGYRSAQGEQWEY------------RHDASGRRTEKRCDRKKIRFTYLWDGDSIAEIREY 1304 Query: 174 VQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPL 233 ++ + S+++ V Q + P + + + D G PL Sbjct: 1305 RDDKLYSVRHLVFNGFELISQQF-----SRVRQPHPSVAPQWVT--RTNHAVSDLTGRPL 1357 Query: 234 ALVSTEGATEWC-AEYDEWGNLLNEENPHQLQQL-----------IRLPGQQYDEESGLY 281 L ++EG T W + WG L+ + GQ D ESGL Sbjct: 1358 MLFNSEGKTVWRPGQTSLWGLALSLPADTDYPDPRGERDPEADPGLLYAGQWQDAESGLC 1417 Query: 282 YNRHRYYDPLQGRYITQDPIGLKGGWNFYQYPLNPVQYIDSMGLA 326 YNR RYY+P G Y+ DP+GL+GG Y+Y NP YID +GLA Sbjct: 1418 YNRFRYYEPETGMYLVSDPLGLQGGEQTYRYVPNPCGYIDPLGLA 1462 Score = 61.0 bits (146), Expect = 8e-08, Method: Composition-based stats. Identities = 55/311 (17%), Positives = 84/311 (27%), Gaps = 65/311 (20%) Query: 12 HYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTR------------- 58 H Y YD R+ +D +D+ R+ YD+Q R V T Sbjct: 604 HLFYEYDAADRIIRWSD---------NDQTWSRFTYDAQGRCVTVTGAEGYYNATLDYGD 654 Query: 59 --TQYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSR-------KPQVTWYGWD- 108 T + RY YDP G + + W +V + ++ Sbjct: 655 GCTTVTDGKGIHRYYYDPDGNILREEAPDGSTTTYEWDEFHHLLARHSPAGRVEKFEYNA 714 Query: 109 --GDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQ--RRSLADTLQQSGGEDG 164 G D Q Y L + G+ Q R L +L GE+ Sbjct: 715 AHGQLSRYTAADGADWQYCYDERGL--LSNITAPAGQTWTQQCDERGLPVSLVSPQGEET 772 Query: 165 GSVVFPPVLVQMLDRL-------------ESEILADRVSEESRRWLASCGLTVEQMQNQM 211 P L+ + R E L D + E + L V+ Sbjct: 773 RLAYTPQGLLSGIFRQDERRLGIEYDHHNWPETLTDVMGREHHTEYSGHDLPVKMRGPGG 832 Query: 212 DPVYTPARKIHL-------------YHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEE 258 V ++ H + D G LA G W EY + + Sbjct: 833 QSVRLQWQQHHKLSGLERAGTGAEGFRYDRHGNLLAYTDGNG-VVWTMEYGPFDLPVART 891 Query: 259 NPHQLQQLIRL 269 + + R Sbjct: 892 DGEGHRWQYRY 902 Score = 51.0 bits (120), Expect = 9e-05, Method: Composition-based stats. Identities = 44/263 (16%), Positives = 75/263 (28%), Gaps = 45/263 (17%) Query: 14 LYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYLYD 73 YRYD G T + + + E ++ Y D+ RL + +++Y YD Sbjct: 942 RYRYDADGLCTARVNGLEETIL---------YSRDAAGRLAEVITPEG-----KTQYAYD 987 Query: 74 PLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQPGSFTP 133 GR LTG S Q T Y G T Q R I+ Y P T Sbjct: 988 KSGR------------LTGIFSPDGTSQRTGYDERGRVNVTTQG-RRAIEYHY-PDEHTV 1033 Query: 134 LIRVETATGELAK---------TQRRSLADTLQQSGGEDGGSVVF--PPVLVQMLDRLES 182 + + E + T R + A L + ++ F ++L Sbjct: 1034 IRCILPPEDERDRHPDGSLLKTTYRYNAAGELTEVILPGDETLTFSRDEAGREVLRHSNR 1093 Query: 183 EILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALV---STE 239 ++ + + ++ + + R+ D G + Sbjct: 1094 GFACEQGWNAAGQPVSQRAGLFPAEATWGGLLPSLLREYRY---DSAGNVSGVTSREDYG 1150 Query: 240 GATEWCAEYDEWGNLLNEENPHQ 262 T D G + Sbjct: 1151 RETHREYRLDRNGQVTAVTASGT 1173 Score = 46.3 bits (108), Expect = 0.002, Method: Composition-based stats. Identities = 43/175 (24%), Positives = 52/175 (29%), Gaps = 43/175 (24%) Query: 15 YRYDRHGRLTEKTDLIPE-----------GVIRTDD-ERTHRYHYD-SQHRLVHYTRTQY 61 +RYDRHG L TD V RTD +Y YD +L Q Sbjct: 858 FRYDRHGNLLAYTDGNGVVWTMEYGPFDLPVARTDGEGHRWQYRYDKDTLQLTEVINPQG 917 Query: 62 AE-----------------PLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQV-- 102 V RY YD G A+ E L + R +V Sbjct: 918 ESYLYILDNCGRVTEERDWGGVVCRYRYDADGLCTARVNGLEETILYSRDAAGRLAEVIT 977 Query: 103 ----TWYGWD-GDRLTTI-QNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRS 151 T Y +D RLT I D T +T Y RV T + Sbjct: 978 PEGKTQYAYDKSGRLTGIFSPDGTSQRTGYDERG-----RVNVTTQGRRAIEYHY 1027 Score = 41.7 bits (96), Expect = 0.061, Method: Composition-based stats. Identities = 46/293 (15%), Positives = 83/293 (28%), Gaps = 62/293 (21%) Query: 13 YLYRYDRHGRLTEKTDLIPEGVIRTDD------------ERTHRYHYDSQH-RLVHYTRT 59 + Y YD G + + D R ++ Y++ H +L YT Sbjct: 666 HRYYYDPDGNILREEAPDGSTTTYEWDEFHHLLARHSPAGRVEKFEYNAAHGQLSRYTAA 725 Query: 60 QYAEPLVESRYLYDPLG---RRVAK--RVWRRERDLTG--WMSLSRKPQVTW--YGWDGD 110 A + +Y YD G A + W ++ D G +S + + T Y G Sbjct: 726 DGA----DWQYCYDERGLLSNITAPAGQTWTQQCDERGLPVSLVSPQGEETRLAYTPQGL 781 Query: 111 RLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGG----- 165 + D R+ Y ++ + + L ++ GG+ Sbjct: 782 LSGIFRQDERRLGIEYDHHNWPETLTDVMGREHHTEYSGHDLPVKMRGPGGQSVRLQWQQ 841 Query: 166 --------------------------SVVFPPVLVQMLDRLESEILADRVSEESRRWLAS 199 + +V ++ ++ R E RW Sbjct: 842 HHKLSGLERAGTGAEGFRYDRHGNLLAYTDGNGVVWTMEYGPFDLPVARTDGEGHRWQY- 900 Query: 200 CGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWG 252 ++ Q+ V P + +LY D+ G G YD G Sbjct: 901 ---RYDKDTLQLTEVINPQGESYLYILDNCGRVTEERDW-GGVVCRYRYDADG 949 >UniRef50_B1JCT8 RHS protein n=1 Tax=Pseudomonas putida W619 RepID=B1JCT8_PSEPW Length = 231 Score = 153 bits (387), Expect = 1e-35, Method: Composition-based stats. Identities = 52/155 (33%), Positives = 80/155 (51%), Gaps = 5/155 (3%) Query: 233 LALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEESGLYYNRHRYYDPLQ 292 + L ++EG W A Y WG + E H ++Q +R GQ ++ E+GL+YN RYYDP Sbjct: 1 MELSNSEGEIVWQATYRSWGAI-EELKVHDIEQNLRFQGQYFESETGLHYNTLRYYDPEV 59 Query: 293 GRYITQDPIGLKGGWNFYQYPLNPVQYIDSMGLASKYGHLNNGGYGARPNKPPTPDPSKL 352 GR++TQDPIGL G NFYQY +PV ++D GLA K + G+ P + + + Sbjct: 60 GRFVTQDPIGLGDGMNFYQYAPSPVMWVDPWGLAFKSVNF----EGSPDLFPTSGNQKNI 115 Query: 353 PDIAKQLRLPYPIDQASSAPNVFKTFFRALSPYDY 387 I Q +A + + +++ Y + Sbjct: 116 VSIQLQGSRGRDFTEAFKEAGLTRAQVKSIGKYTW 150 >UniRef50_UPI00019F181C rhsC element core protein RshC n=2 Tax=Enterobacteriaceae RepID=UPI00019F181C Length = 260 Score = 153 bits (387), Expect = 1e-35, Method: Composition-based stats. Identities = 81/139 (58%), Positives = 93/139 (66%), Gaps = 5/139 (3%) Query: 214 VYTPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQ 273 +Y RK+HLY C GL L G T W AEYDEWGNLLNE+NP LQQLIRLPGQQ Sbjct: 1 MYCKYRKLHLYRCYRLGLTLIRTD--GRTGWRAEYDEWGNLLNEDNPQNLQQLIRLPGQQ 58 Query: 274 YDEESGLYYNRHRYYDPLQGRYITQDPIGLKGGWNFYQYPLNPVQYIDSMG---LASKYG 330 YD+ES LYYNRHRYY+P QGRYITQDPIG+KGG N Y YPLNPV+ +D +G L Sbjct: 59 YDDESELYYNRHRYYNPEQGRYITQDPIGMKGGLNSYAYPLNPVESVDPLGSETLKCIKP 118 Query: 331 HLNNGGYGARPNKPPTPDP 349 + GG G + +P Sbjct: 119 LHSIGGIGEKSGPDIWGNP 137 >UniRef50_C5T0D9 YD repeat protein n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T0D9_ACIDE Length = 1001 Score = 153 bits (387), Expect = 1e-35, Method: Composition-based stats. Identities = 75/380 (19%), Positives = 125/380 (32%), Gaps = 60/380 (15%) Query: 5 NRIARDAHYLYRYDRHGRL--TEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYA 62 ++A A +D GR+ ++ ++P T Y+YD+ L + Sbjct: 482 GQLAGSALLDLTWDTAGRIRQIKQQHMLPGTAQAQQAVITSAYNYDATGHLTASAHSGPP 541 Query: 63 E-------------PLVESRYLYDPLGRR--------------VAKRVWRRERDLTGWMS 95 + Y +D G R +RV++ S Sbjct: 542 GLALPSGDSLSDTIGMDSIGYAWDANGNRSQTYYSATTSAGAATLQRVYQGTSGGNQLRS 601 Query: 96 LSRKPQV---------TWYGWDGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAK 146 + Q+ T Y +D T + D + + + + Sbjct: 602 YTETLQLPGSLAQTTSTTYTYDATGALTKKGD-SYLHYGVDGRIGKASASADPGNVQAVS 660 Query: 147 TQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLT--- 203 + +L + +S + V D + S +L + S A G T Sbjct: 661 YRYNALGQRVIKSDARLSTTSPLTQQTVYDEDGIGSTVLGQYSNRRSATSTAPAGETDTT 720 Query: 204 ----VEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEEN 259 + M +++ DH P + + +G W +G + Sbjct: 721 EIIYLPTASGPMPIAAQINGRLYAIDADHLNTPRRMTNQQGQVVWQWLITGFGEVQPTTA 780 Query: 260 P-------------HQLQQLIRLPGQQYDEESGLYYNRHRYYDPLQGRYITQDPIGLKGG 306 + +R PGQQ+D E+ L YN HRYYD GRYI DPIGL GG Sbjct: 781 AAGYKHDGQGTAYGEAVAFDLRYPGQQWDAETKLAYNLHRYYDAATGRYIQADPIGLGGG 840 Query: 307 WNFYQYP-LNPVQYIDSMGL 325 WN + Y NP+ ++D +GL Sbjct: 841 WNRFGYVGGNPLSFVDPVGL 860 Score = 46.3 bits (108), Expect = 0.002, Method: Composition-based stats. Identities = 41/280 (14%), Positives = 77/280 (27%), Gaps = 45/280 (16%) Query: 15 YRYDRHGRLTEKT--------DLIPEGVIRT---DDERTHRYHYDSQHRLVHYTRTQYAE 63 Y YD+ RLT + P G ++T D Y YD+ RL+ + + Sbjct: 100 YTYDQRQRLTSISGDGATFLMTYQPTGQLKTLTQPDGYKITYEYDTAQRLIGWADNRGGT 159 Query: 64 PLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQ 123 Y + +G+R +++ D G + + + + +R++T + Sbjct: 160 G----SYALNAMGKRTQEQIL----DSAGSTAFALSRTIDSF----NRISTETVGGNQTV 207 Query: 124 TIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESE 183 GS + R + + T ++ S+V+ Sbjct: 208 AYSYNGSSDLVGRTNALSQSTSYTFDNLRRLATEKDPLGTQASLVYDAGDAITRATDFKG 267 Query: 184 ILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATE 243 + + Q D GLP + G Sbjct: 268 VATSYERDARGNAKGETSADAGAQSAQ---------------YDTLGLPKQVTDALGRAT 312 Query: 244 WCAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEESGLYYN 283 D G + +R + +GL YN Sbjct: 313 -TITRDALGRPTLLQYADNTSTTLRY------DLAGLTYN 345 >UniRef50_A9FQL9 Putative uncharacterized protein n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=A9FQL9_SORC5 Length = 2257 Score = 153 bits (385), Expect = 2e-35, Method: Composition-based stats. Identities = 75/319 (23%), Positives = 109/319 (34%), Gaps = 32/319 (10%) Query: 12 HYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYL 71 Y D GR+ T+ I D T+ Y D RL R ++ + Y Sbjct: 1853 EVTYTPDALGRIQSLTETIQ------GDTATYAYVRDLNDRLTDVYR----NGVLTAHYN 1902 Query: 72 YDPLGRRVAKRVWRRERDLTGWMS---LSRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQP 128 YD G R+A LS GD L T+ + T T Sbjct: 1903 YDVNGNRLAHTSSSGTAIGVYDDQDRLLSYGSTTYGVSPTGD-LATVTDTATAATTTLMY 1961 Query: 129 GSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADR 188 + L +V +G++ + + + ++G V D L+ Sbjct: 1962 DARGNLRQVVLGSGDVIEYLVDGENHRIWK--KKNGVMV----QGFLYRDDLQPAAELGP 2015 Query: 189 VSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVS-TEGATEWCAE 247 ++ V + + DHRG P +V+ GA + Sbjct: 2016 TGAVVAQFAYGQDRNVP-------DLVLKGGATYRILTDHRGSPRLVVNTATGAVAQRID 2068 Query: 248 YDEWGNLLNEENPHQLQQLIRLPGQQYDEESGLYYNRHRYYDPLQGRYITQDPIGLKGGW 307 YDE+G +L + NP Q G YD E+ L R YD GR+ +DPI GG Sbjct: 2069 YDEFGRVLQDTNPGF--QPFGFAGGLYDAETKLVRFGARDYDAEVGRWTAKDPILFDGGD 2126 Query: 308 -NFYQYPLN-PVQYIDSMG 324 N Y Y LN PV + D G Sbjct: 2127 ANLYGYVLNDPVNFTDPNG 2145 Score = 44.0 bits (102), Expect = 0.012, Method: Composition-based stats. Identities = 52/324 (16%), Positives = 83/324 (25%), Gaps = 61/324 (18%) Query: 15 YRYDRHGRLTEKTDLIPEGV------------IRTDDERTHRYHYDSQHRLVHYTRTQYA 62 + +D GR T+ T E + + D H + Y L Y Sbjct: 1614 FLHDAVGRATQVTRADDEVIGTSYYPGGLVHTVTPPDRPAHTFGYTPADLLEEYLAPAVG 1673 Query: 63 EPLVESRYLYDPLGRRVAK-RVWRRERDLTGWMSLSRKPQV----------TWYGWDGDR 111 ++ + YD G + R T S R QV Y Sbjct: 1674 GGPGDTSWSYDLDGMLTSSARPGEAATVYTRDPSTGRLSQVALPLGMGTIGYGYHPTTGS 1733 Query: 112 LTTIQND-RTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLAD--TLQQSGGEDGGSVV 168 LTT+ + Y T L T G + + + + + + G ++ Sbjct: 1734 LTTVSGPSGISLNFAYDGELLTGLTWTGTGFGGSSASVQWAYDNDFRIDTETVGGGATIN 1793 Query: 169 FPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYT-----PARKIH- 222 F +L + L+ +T + V T A ++ Sbjct: 1794 FDYDADGLLTQAGGLTLSRHPGNGMYTGSTIGVVTDGVTHDAYGAVATYVAQANASTVYE 1853 Query: 223 -LYHCDHRGLPLALVST-----------------------EGATEWCAEYDEWGNLLNEE 258 Y D G +L T G YD GN L Sbjct: 1854 VTYTPDALGRIQSLTETIQGDTATYAYVRDLNDRLTDVYRNGVLTAHYNYDVNGNRLAHT 1913 Query: 259 NPHQLQQLIRLPGQQYDEESGLYY 282 + G D++ L Y Sbjct: 1914 SSSGTAI-----GVYDDQDRLLSY 1932 >UniRef50_Q4UTI1 RhsD protein n=4 Tax=Xanthomonas RepID=Q4UTI1_XANC8 Length = 1465 Score = 152 bits (383), Expect = 3e-35, Method: Composition-based stats. Identities = 70/321 (21%), Positives = 108/321 (33%), Gaps = 33/321 (10%) Query: 15 YRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYLYDP 74 + +D G LT L P G + YD+ RL T V Y YD Sbjct: 1144 FGFDEVGNLTS---LTPAGNPTPEIG----LGYDTLGRLTAL--TDGVTGTVIDGYSYDA 1194 Query: 75 LGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQPGSFTPL 134 G R++ +V + T + R V D+ + + + F Sbjct: 1195 TGNRLSAKVGSVTQAYTYPTTNHRLSAVAGVARTYDKTGNTLSIGGKAR------EFPYD 1248 Query: 135 IRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSEESR 194 + + A + + L + + ++ Sbjct: 1249 ASGRMSMVKRAGVLVMNYRYNGKGEQVRRFLGTTITYTLYDEAGHWLGDYDNNGAPKQQA 1308 Query: 195 RWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATE---WCAEYDEW 251 WL + + A K+H DH G P +V W + + + Sbjct: 1309 IWLDDLPV----------GLLANANKLHYIEPDHLGSPRVVVDPVRNVAAWSWSLKGEAF 1358 Query: 252 GNLLNEENPH----QLQQLIRLPGQQYDEESGLYYNRHRYYDPLQGRYITQDPIGLKGGW 307 GN ++P L +R PGQ++D SGL N R YD GRY DPIGL GG Sbjct: 1359 GNTAPNQDPDGDGAALVLDMRFPGQRFDAASGLNQNYFRDYDSATGRYGQSDPIGLGGGL 1418 Query: 308 NFYQYP-LNPVQYIDSMGLAS 327 + + Y +P+ ID +GL S Sbjct: 1419 STFGYVGGSPLYLIDPLGLES 1439 Score = 58.7 bits (140), Expect = 5e-07, Method: Composition-based stats. Identities = 52/284 (18%), Positives = 86/284 (30%), Gaps = 39/284 (13%) Query: 9 RDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVES 68 + YD G + + D R Y YD+ +R V + A +E+ Sbjct: 947 DTGSTGFTYDDAGNVLSRKDA---------ANRQATYTYDALNRPVSVSYADAA---LET 994 Query: 69 RYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWD--GDRLTTIQ-NDRTRIQTI 125 R++YD A V + S+ T Y ++ GD + +Q + + Sbjct: 995 RFVYDVA---PAVCVAGEQFAAGRLASMKDGSGTTQYCYNRFGDLVRKVQTTNGKALTVR 1051 Query: 126 YQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGS-------VVFPPVLVQMLD 178 Y + L + G + R L + GGS + P+ Sbjct: 1052 YAYTAGGRLTSMVYPDGAMVDYVRNELGQVAEVGYTAPGGSREVLVKGATYLPMGPVDGW 1111 Query: 179 RLESEILADRVSEESRRWLASCGLTVEQMQ-----------NQMDPVYTPARKIHLYHCD 227 + + R ++ R A V + + P P +I L D Sbjct: 1112 TYGNGRVLTRAYDQDYRPKAIQDKAVGGLDVGFGFDEVGNLTSLTPAGNPTPEIGL-GYD 1170 Query: 228 HRGLPLALVST-EGATEWCAEYDEWGNLLNEENPHQLQQLIRLP 270 G AL G YD GN L+ + + Q P Sbjct: 1171 TLGRLTALTDGVTGTVIDGYSYDATGNRLSAK-VGSVTQAYTYP 1213 Score = 54.0 bits (128), Expect = 1e-05, Method: Composition-based stats. Identities = 38/230 (16%), Positives = 69/230 (30%), Gaps = 18/230 (7%) Query: 14 LYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYLYD 73 + YD G L E+TD + R+ Y YD+ HRL + S + YD Sbjct: 865 DFTYDAVGTLKERTDAM---------GRSSTYTYDALHRL-KQSIEDAGGIKATSAFQYD 914 Query: 74 PLGR-------RVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTIY 126 LG+ + K ++R S T + +D + D Q Y Sbjct: 915 VLGQPSVVTDPKSLKTTYQRNGLGELLALTSPDTGSTGFTYDDAGNVLSRKDAANRQATY 974 Query: 127 QPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILA 186 + + V A L +A + +G + + + Sbjct: 975 TYDALNRPVSVSYADAALETRFVYDVAPAVCVAGEQFAAGRLASMKDGSGTTQYCYNRFG 1034 Query: 187 DRVSE-ESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLAL 235 D V + ++ A ++ + P + Y + G + Sbjct: 1035 DLVRKVQTTNGKALTVRYAYTAGGRLTSMVYPDGAMVDYVRNELGQVAEV 1084 Score = 53.7 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 51/310 (16%), Positives = 95/310 (30%), Gaps = 64/310 (20%) Query: 14 LYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYD----SQHRLVHYTRTQYAEPLVE-S 68 LY YD G L T D H YHY ++ +LV+Y E + Sbjct: 451 LYDYDVDGNLIAAT---------YPDGAKHLYHYHEKGLAEPQLVNYLTGITGESGQRYA 501 Query: 69 RYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVT------------------------- 103 + YD GR ++ + + G VT Sbjct: 502 SFGYDTYGRVISSVLHGDTGAVDGVTLNYVAEGVTEVTQASGAVKRFEYGSTIFSPVNNV 561 Query: 104 ---------WYGWDGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQ--RRSL 152 Y DG + +++ Y P ++ + V T E +T+ R +L Sbjct: 562 TEGAASTSNTYFSDGRLQSVTDASGSKVSYEYAP-AYRSAVTVGDGTQEAVRTESVRDAL 620 Query: 153 ADTLQQSGGEDGGSVVFPPVLV-----QMLDRLESEILADRVSEESRRWLASCGLT---- 203 L + + +V Q L ++E + ++ + +++ + +T Sbjct: 621 THQLTELNVKGAQGLVVSKRWTRNERGQALTQVEQDAVSGKQRQQTFTYCEQADVTAGSC 680 Query: 204 ----VEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEEN 259 V + + A Y G + + G YD G LL++++ Sbjct: 681 PLVGVLLRVDGARTDLSDATTYDYYPAAQGGDLKTITNAVGQVTQFLSYDSAGRLLSQKD 740 Query: 260 PHQLQQLIRL 269 P+ + Sbjct: 741 PNGVVTDYSY 750 Score = 53.3 bits (126), Expect = 2e-05, Method: Composition-based stats. Identities = 52/268 (19%), Positives = 80/268 (29%), Gaps = 47/268 (17%) Query: 14 LYRYDRHGRLTEKTDLIPEGVIRTDDERTHR--------------------YHYDSQHRL 53 Y YD GRLT + TDD T + YDS RL Sbjct: 747 DYSYDARGRLTASIVRGQDSGSETDDRITRYSYWPTGLVKQVALPGGDVSDFTYDSAFRL 806 Query: 54 VHYTRTQYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMS------------LSRKPQ 101 + +Y ++ Y D GRRV + + + L MS + Sbjct: 807 TKVS-DRYGNAIL---YTLDKSGRRVKEEIQDSKGVLKATMSRLYDELGHLKTTADAQGN 862 Query: 102 VTWYGWDGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGG 161 T + +D + D + Y + L + G + T Q S Sbjct: 863 PTDFTYDAVGTLKERTDAMGRSSTYTYDALHRLKQSIEDAGGIKATSAFQYDVLGQPSVV 922 Query: 162 EDGGSVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKI 221 D S+ + E+LA + S G T + N + R+ Sbjct: 923 TDPKSLKTTYQRNGL-----GELLALTSPDT-----GSTGFTYDDAGNVLSRKDAANRQA 972 Query: 222 HLYHCDHRGLPLALVSTEGATEWCAEYD 249 Y D P+++ + A E YD Sbjct: 973 T-YTYDALNRPVSVSYADAALETRFVYD 999 Score = 47.5 bits (111), Expect = 0.001, Method: Composition-based stats. Identities = 46/273 (16%), Positives = 80/273 (29%), Gaps = 43/273 (15%) Query: 5 NRIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEP 64 N + + +L YD GRL + D + Y YD++ RL Sbjct: 718 NAVGQVTQFL-SYDSAGRLLSQKD---------PNGVVTDYSYDARGRLTASIVRGQDSG 767 Query: 65 LVE----SRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWD-GDRLTTIQ-ND 118 +RY Y P G + K+V D++ + +D RLT + Sbjct: 768 SETDDRITRYSYWPTG--LVKQVALPGGDVSD------------FTYDSAFRLTKVSDRY 813 Query: 119 RTRIQTIYQPGSFTPLIRVETATGELAKTQRR--SLADTLQQSGGEDGGSVVFPPVLVQM 176 I ++ + G L T R L+ + G F V Sbjct: 814 GNAILYTLDKSGRRVKEEIQDSKGVLKATMSRLYDELGHLKTTADAQGNPTDFTYDAVGT 873 Query: 177 LDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALV 236 L D + S + + +++ T A + D G P + Sbjct: 874 LKE-----RTDAMGRSSTYTYDALHRLKQSIEDAGGIKATSA-----FQYDVLGQPSVVT 923 Query: 237 STEGATEWCAEYDEWGNLLNEENPHQLQQLIRL 269 + + + + + G LL +P Sbjct: 924 DPK-SLKTTYQRNGLGELLALTSPDTGSTGFTY 955 Score = 44.8 bits (104), Expect = 0.007, Method: Composition-based stats. Identities = 33/215 (15%), Positives = 54/215 (25%), Gaps = 16/215 (7%) Query: 36 RTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMS 95 RTD Y Y + A V YD GR ++++ + + Sbjct: 693 RTDLSDATTYDYYPAAQGGDLKTITNAVGQVTQFLSYDSAGRLLSQKDPNGVVTDYSYDA 752 Query: 96 LSRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADT 155 R G D + D + Y P T L++ G A Sbjct: 753 RGRLTASIVRGQDS----GSETDDRITRYSYWP---TGLVKQVALPGGDVSDFTYDSAFR 805 Query: 156 LQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVY 215 L + G ++++ + E + + R G Q +P Sbjct: 806 LTKVSDRYGNAILYTLDKSGRRVKEEIQDSKGVLKATMSRLYDELGHLKTTADAQGNPTD 865 Query: 216 TPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDE 250 + D G G YD Sbjct: 866 --------FTYDAVGTLKERTDAMGR-SSTYTYDA 891 >UniRef50_C4DNE3 Putative uncharacterized protein n=1 Tax=Stackebrandtia nassauensis DSM 44728 RepID=C4DNE3_9ACTO Length = 714 Score = 151 bits (382), Expect = 4e-35, Method: Composition-based stats. Identities = 76/360 (21%), Positives = 118/360 (32%), Gaps = 40/360 (11%) Query: 7 IARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHR---YHYDSQHRLVHYTRTQ--Y 61 + + YD G +T D V ++R Y +D+ +RLV T + Sbjct: 23 LTALQDLTHTYDPIGNITHIADAAQSTVFN-GNQRVESSADYTFDATYRLVEATGREQIG 81 Query: 62 AEPLVES------RYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWD--GDRLT 113 A E+ R+ YD +G ++ W + +GW R + + G+RL+ Sbjct: 82 AADDGEALGRYLRRFGYDQVGNLLSMTHWATDPAKSGWTRRYRYDEASLLEPGVPGNRLS 141 Query: 114 TIQNDRTRIQTIYQPGSFT--------PLIRVETATGELAKTQRRSLADTLQQSGGEDGG 165 I ++ + P +R + L T RR D D Sbjct: 142 AITDNGPTTPQRFSYDEHGNTTAMPELPSLRWDFKDR-LRSTARRDDNDLATTFYVYDAN 200 Query: 166 SVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPA------- 218 V RL + R Q + +D A Sbjct: 201 GNRVRKVTEHHGSRLSERVYLGPFEIHRRHRANGELTLERQTLHILDGEQRIALVERRTE 260 Query: 219 -------RKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQL--IRL 269 R D G + EY +G E + + R Sbjct: 261 GDDEGLERLTRFQLADQIGSSTLELDDSARIISHEEYYPYGGTAVESVRSRTETPKRYRF 320 Query: 270 PGQQYDEESGLYYNRHRYYDPLQGRYITQDPIGLKGGWNFYQYP-LNPVQYIDSMGLASK 328 G++ DEESGLYY+ RYY P GR+ + DP G+ G N Y Y NP+ + D G ++ Sbjct: 321 TGKERDEESGLYYHGARYYAPGLGRWTSGDPKGIAEGPNPYVYTRNNPIVFADPDGREAR 380 >UniRef50_B0MES5 Putative uncharacterized protein n=3 Tax=Clostridiales RepID=B0MES5_9FIRM Length = 2397 Score = 151 bits (382), Expect = 5e-35, Method: Composition-based stats. Identities = 65/340 (19%), Positives = 121/340 (35%), Gaps = 36/340 (10%) Query: 8 ARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDD-ERTHRYHYDSQHRLVHYTRTQYA--EP 64 Y Y YD++ + EKT + + T Y YDS RL T + + Sbjct: 1877 TVVESYAYSYDKNSNIIEKTQINNYPQKDEEKVNETKHYTYDSLGRLEKTVTTDHRKDDS 1936 Query: 65 LVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTW----------YGWDGDRLTT 114 Y YD +G R+A+ + TW Y +D + Sbjct: 1937 KQTVTYTYDKVGNRLAEEKGDTKTTYDYNGLDQVTTSTTWKDGTAQENKQYAYDKNGNEI 1996 Query: 115 IQNDRTRIQTIYQ-PGSFTPLIRV----ETATGELAKTQRRSLADTLQQSGGEDGGSVVF 169 Q + + +Y+ + L V + + + + +Q+ G+ + + Sbjct: 1997 GQTNSKTGEILYRTYDAENRLTEVSVNKDGKNAIVQQNRYNGDGQRIQRVEGDQTTNYYY 2056 Query: 170 PPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHR 229 D + S + + S+ L + G + + + ++Y+ D + Sbjct: 2057 -------QDGVVSYTTNGKGDQTSQDLLGTDGNIIGTQRYTGNDAA-----YYVYNKDVQ 2104 Query: 230 GLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEESGLYYNRHRYYD 289 G L+ +G + Y+++G + + G +YDE +G YY RYY+ Sbjct: 2105 GSTTNLLKDDGKADVSYRYEDFGETTSV-GENTSGNETCYTGGRYDETTGFYYLNARYYN 2163 Query: 290 PLQGRYITQDPIG----LKGGWNFYQYPL-NPVQYIDSMG 324 P GR++++D + Y Y NPV Y+D G Sbjct: 2164 PEDGRFLSEDTYRGETNEPDTQHLYAYCADNPVNYVDPSG 2203 Score = 54.4 bits (129), Expect = 1e-05, Method: Composition-based stats. Identities = 50/295 (16%), Positives = 93/295 (31%), Gaps = 40/295 (13%) Query: 13 YLY---RYDRHGRLTEKTDLIPEGVIRTDDERTH--RYHYDSQHRLVHYTRTQYAEPLVE 67 Y Y YD R T +L D+ R+H +Y YD++ +L + + Sbjct: 1736 YRYTECEYDGLQRKTTYAELSQSEKPTADEIRSHAIKYAYDAEGKLTKVIYPTKKDGVRS 1795 Query: 68 SRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDG--------DRLTTIQNDR 119 Y Y + + S +++ V Y +D D + + Sbjct: 1796 LSYHY------TSDGWLSVIKADVYKGSDAKEATVRTYAYDDYGKVTEIKDYRNLLSDGD 1849 Query: 120 TRIQTIYQPGSFT------------PLIRVETATGELAKTQRRSLADTLQQSGGEDGGSV 167 ++ +Y +F P VE+ K + +D V Sbjct: 1850 KAVKKVYTYDTFDRVSKMVYTDLEHPDTVVESYAYSYDKNSNIIEKTQINNYPQKDEEKV 1909 Query: 168 VFPPVLVQM-LDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYH- 225 L RLE + D ++S++ + T +++ N++ + + Y+ Sbjct: 1910 NETKHYTYDSLGRLEKTVTTDHRKDDSKQ---TVTYTYDKVGNRLAEEKGDTKTTYDYNG 1966 Query: 226 CDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEESGL 280 D YD+ GN + + N + L R YD E+ L Sbjct: 1967 LDQVTTSTTWKDGTAQENKQYAYDKNGNEIGQTNSKTGEILYR----TYDAENRL 2017 Score = 47.9 bits (112), Expect = 8e-04, Method: Composition-based stats. Identities = 43/262 (16%), Positives = 81/262 (30%), Gaps = 58/262 (22%) Query: 5 NRIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEP 64 + + YD +G T++T ++ YHYD ++RL + E Sbjct: 1649 GNLGESISTKFTYDTNGNKTKET---------YENGAYKTYHYDKKNRLTETNTYESPEA 1699 Query: 65 LVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDG-DRLTTI----QNDR 119 ES G R K T Y +DG D+L + + Sbjct: 1700 GSES-------GTRTLK---------------------TSYSYDGNDQLIEMVDYQVSGN 1731 Query: 120 TRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDR 179 T Y + L R +T EL+++++ + + ++ + L + Sbjct: 1732 TETAYRYTECEYDGLQR-KTTYAELSQSEKPTADEIRSH-------AIKYAYDAEGKLTK 1783 Query: 180 LESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLA----- 234 + D V S + + L+V + + + Y D G Sbjct: 1784 VIYPTKKDGVRSLSYHYTSDGWLSVIKA-DVYKGSDAKEATVRTYAYDDYGKVTEIKDYR 1842 Query: 235 --LVSTEGATEWCAEYDEWGNL 254 L + A + YD + + Sbjct: 1843 NLLSDGDKAVKKVYTYDTFDRV 1864 Score = 47.9 bits (112), Expect = 0.001, Method: Composition-based stats. Identities = 54/284 (19%), Positives = 81/284 (28%), Gaps = 39/284 (13%) Query: 14 LYRYDRHGRLTEKTDLIPEGVIRTDDERT--HRYHYDSQHRLVHYTRTQY-AEPLVESRY 70 Y YD+ RLTE RT Y YD +L+ Q RY Sbjct: 1679 TYHYDKKNRLTETNTYESPEAGSESGTRTLKTSYSYDGNDQLIEMVDYQVSGNTETAYRY 1738 Query: 71 L---YDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGD-RLTTI-----QNDRTR 121 YD L R K + + + Y +D + +LT + ++ Sbjct: 1739 TECEYDGLQR---KTTYAELSQSEKPTADEIRSHAIKYAYDAEGKLTKVIYPTKKDGVRS 1795 Query: 122 IQTIYQPGSFTPLIRVETATGELA--KTQRRSLADTLQQ-----------SGGEDGGSVV 168 + Y + +I+ + G A T R D + S G+ V Sbjct: 1796 LSYHYTSDGWLSVIKADVYKGSDAKEATVRTYAYDDYGKVTEIKDYRNLLSDGDKAVKKV 1855 Query: 169 FPPVLVQMLDRLESEILA--DRVSEESRRWLASCGLTVEQMQNQMDPV--YTPARKIHLY 224 + + ++ L D V E +E+ Q P + Y Sbjct: 1856 YTYDTFDRVSKMVYTDLEHPDTVVESYAYSYDKNSNIIEKTQINNYPQKDEEKVNETKHY 1915 Query: 225 HCDHRGLPLALV------STEGATEWCAEYDEWGNLLNEENPHQ 262 D G V T YD+ GN L EE Sbjct: 1916 TYDSLGRLEKTVTTDHRKDDSKQTV-TYTYDKVGNRLAEEKGDT 1958 Score = 45.2 bits (105), Expect = 0.006, Method: Composition-based stats. Identities = 44/281 (15%), Positives = 77/281 (27%), Gaps = 49/281 (17%) Query: 17 YDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQY--------AEPLVES 68 YD G T KTD + T Y YD Q+R+ ++ V + Sbjct: 1571 YDDKGNETAKTD---------GNGNTVAYTYDDQNRVTKVSQGDNSTSISYTMGTDGVNT 1621 Query: 69 RYLYDPLGR-RVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQ 127 + D +G + + T + T + +D + T + Y Sbjct: 1622 TSITDAMGHENIEVTNAAGLTETTTSKGNLGESISTKFTYDTNGNKTKETYENGAYKTYH 1681 Query: 128 PGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILAD 187 L T E + S TL+ S DG + V Q+ E+ Sbjct: 1682 YDKKNRLTETNTY--ESPEAGSESGTRTLKTSYSYDGNDQLIEMVDYQVSGNTETAYRYT 1739 Query: 188 RVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHL----------------------YH 225 + + + + + D + + A K YH Sbjct: 1740 ECEYDGLQRKTTYAELSQSEKPTADEIRSHAIKYAYDAEGKLTKVIYPTKKDGVRSLSYH 1799 Query: 226 CDHRG-------LPLALVSTEGATEWCAEYDEWGNLLNEEN 259 G + AT YD++G + ++ Sbjct: 1800 YTSDGWLSVIKADVYKGSDAKEATVRTYAYDDYGKVTEIKD 1840 >UniRef50_A6Q9U6 Putative uncharacterized protein n=1 Tax=Sulfurovum sp. NBC37-1 RepID=A6Q9U6_SULNB Length = 473 Score = 151 bits (380), Expect = 6e-35, Method: Composition-based stats. Identities = 65/299 (21%), Positives = 104/299 (34%), Gaps = 23/299 (7%) Query: 40 ERTHRYHYDSQHRLVHYTRTQYAEPLVESR-YLYDPLGRRVAKRVWRRERDLTGWMSLS- 97 T+ Y YD + RL+ + V Y YD G R V+ E + + + Sbjct: 67 HVTYHYSYDERDRLIKVEKGGKKNSRVTVEEYRYDSNGNRAWANVYGIETTGSYTLDDNL 126 Query: 98 --RKPQVTWYGWDGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADT 155 Y DG L Y G+ L V T T + Sbjct: 127 IVYGDNTYRYDEDGY-LAEKTTPHGTTTYSY--GTMGELREVVTPTTSTGSVTVTYEYNA 183 Query: 156 LQQSGGEDGGSVVFPPVLVQMLDRLESEILA--DRVSEESRRWLASCGLTVEQMQNQMDP 213 L Q ++ + + L + +LA D+ +R+ + G M + Sbjct: 184 LNQ----RVAKLIDGEITEKYLWADLATLLAIYDKDDNLVQRFEYADGRIPVAMTDS--- 236 Query: 214 VYTPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQ 273 + H D G A+ YD +GN+L + N + G Sbjct: 237 ----NGTKYYLHYDQVGSLRAVSDASHNVIKEITYDTFGNILTDSN-EAFKVPFGFAGGL 291 Query: 274 YDEESGLYYNRHRYYDPLQGRYITQDPIGLKGGW-NFYQYP-LNPVQYIDSMGLASKYG 330 YD ++ L +R YD G++ +DPIG GG N Y Y +PV ++D+ GL ++ Sbjct: 292 YDTDTQLTRFGYRDYDAYTGKWTAKDPIGFAGGDSNLYGYVLGDPVDFVDAEGLFIQFA 350 Score = 52.5 bits (124), Expect = 3e-05, Method: Composition-based stats. Identities = 44/245 (17%), Positives = 67/245 (27%), Gaps = 31/245 (12%) Query: 4 DNRIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAE 63 D+ + YRYD G L EKT T Y Y + L + Sbjct: 123 DDNLIVYGDNTYRYDEDGYLAEKTTP----------HGTTTYSYGTMGELREVVTPTTST 172 Query: 64 PLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLS--------RKPQVTWYGWDGDRLTTI 115 V Y Y+ L +RVAK + + W L+ V + + R+ Sbjct: 173 GSVTVTYEYNALNQRVAKLIDGEITEKYLWADLATLLAIYDKDDNLVQRFEYADGRIPVA 232 Query: 116 QNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQ 175 D + L V A+ + K + E + Sbjct: 233 MTDSNGTKYYLHYDQVGSLRAVSDASHNVIKEITYDTFGNILTDSNEAFKVPFGFAGGLY 292 Query: 176 MLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLAL 235 D + + +W A DP+ +LY G P+ Sbjct: 293 DTDTQLTRFGYRDYDAYTGKWTAK------------DPIGFAGGDSNLYGY-VLGDPVDF 339 Query: 236 VSTEG 240 V EG Sbjct: 340 VDAEG 344 >UniRef50_C0EUA4 Putative uncharacterized protein n=1 Tax=Eubacterium hallii DSM 3353 RepID=C0EUA4_9FIRM Length = 2296 Score = 151 bits (380), Expect = 7e-35, Method: Composition-based stats. Identities = 72/355 (20%), Positives = 118/355 (33%), Gaps = 43/355 (12%) Query: 12 HYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYL 71 Y YD GR+ + +D T +Y YD+Q +L+ Q + Y Sbjct: 1712 SLKYEYDTLGRIVKVSD--------TKGNILAQYSYDAQGQLLMEKLPQQNKRY---EYT 1760 Query: 72 YDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQPGSF 131 YD +G + + +W + L T + + I G+ Sbjct: 1761 YDTVGNIQDAKTYTLTGTTATATKKYTYGDASW-----NDLLTAYDG----KEITYDGAG 1811 Query: 132 TPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQ---MLDRLESEILADR 188 PL G K + S + + ++ ++ ++ E + Sbjct: 1812 NPLA---YNNGTAWKFTWEKGRELSSASADGKNITFTYDVDGIRDSKTINGVKHEYVTLD 1868 Query: 189 VSEESRRWLASCGLTVEQMQNQMDPVYTP--ARKIHLYHCDHRGLPLALVSTEGATEWCA 246 +W T+ + D Y + Y + +G + +V G T+ Sbjct: 1869 GLIYQEKW---GNNTLTFSYDNNDKPYAVKYNNTTYYYVLNQQGDVIRIVDENGTTKAEY 1925 Query: 247 EYDEWGNLLNEENPHQ---LQQLIRLPGQQYDEESGLYYNRHRYYDPLQGRYITQDPIGL 303 YD WGN++ + G YD E G+YY R RYYDP R+I D + Sbjct: 1926 TYDAWGNVIASTGTDSGIGAVNPLLYRGYYYDSELGMYYLRSRYYDPGVKRFINADSVDY 1985 Query: 304 KG------GWNFYQYP-LNPVQYIDSMGLASKYGHLNNGGYGARPNKPPTPDPSK 351 G +N + Y NP+ YID G A H+ G G +K Sbjct: 1986 LGENKTELSYNLFAYCENNPIIYIDKDGYA--VAHIVGGAIGGLSGVALGKFLAK 2038 Score = 49.4 bits (116), Expect = 3e-04, Method: Composition-based stats. Identities = 37/268 (13%), Positives = 81/268 (30%), Gaps = 38/268 (14%) Query: 7 IARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLV 66 + + LY YD G L D + V Y YD + ++ T Sbjct: 1311 LVEEEASLYDYDSKGNLISAIDGDGKFV----------YDYDDKGNIISVTDEDGN---- 1356 Query: 67 ESRYLYDPLGR----------RVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQ 116 ++ + YD G ++++ ++ Y DG+ +++ Sbjct: 1357 KTNFKYDESGNLEGISANEFSVKEDDEGTEQKNIIEGKDGTKSTSSIKYTADGNYISSET 1416 Query: 117 NDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLAD------TLQQSGGEDGGSVVFP 170 + + + YQ T L++ + + + + + L+ GE+ S+ + Sbjct: 1417 DAAGAVTS-YQYDDKTDLLKTTVDSNKNTTSYTYNSGNSQLSKAALKDKNGEELVSLNYT 1475 Query: 171 PVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRG 230 M S D+ ++ + + V + + + G Sbjct: 1476 YSNGIMSSLKRSGYREDKAIQQEYSFGYNKWKQVTSISAGKYKLAG------YEYAGKNG 1529 Query: 231 LPLALVSTEGATEWCAEYDEWGNLLNEE 258 L G + +YD G L + Sbjct: 1530 SLTQLTYGNG-VKETYKYDTLGQLASIS 1556 >UniRef50_D2U9B6 Putative rhs family protein n=1 Tax=Xanthomonas albilineans RepID=D2U9B6_XANAL Length = 1547 Score = 151 bits (380), Expect = 8e-35, Method: Composition-based stats. Identities = 75/323 (23%), Positives = 118/323 (36%), Gaps = 43/323 (13%) Query: 15 YRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYLYDP 74 + +D G L+ T + + D YD+ RL + V Y YD Sbjct: 1131 FGFDPGGNLSALTAPGNTAAVVSLD-------YDALGRLTAFK--DGPTGTVIDGYTYDA 1181 Query: 75 LGRRVA---KRVWRRERDLTGWMSLSRKPQVTW-YGWDGDRLTTIQNDRTRIQTIYQPGS 130 G R++ + + T LS Y G+ T T Q +Y G+ Sbjct: 1182 TGNRLSAKVNTITQTYAYPTNSHQLSSVGSTVRSYDATGN---TTAIGGTAEQLVY--GA 1236 Query: 131 FTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVS 190 L +V+ +A + ++Q G + L + ++ + Sbjct: 1237 NGRLAQVKRNGVVVANYAYNGHGEQVRQVGKTN------TYTLYDEAGHWLGDYDSNGAA 1290 Query: 191 EESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATE---WCAE 247 + WL + V + ++ DH G P A++ + W + Sbjct: 1291 VQQAIWLDDLPVGV-----------VVKKSVNYIEPDHLGTPRAVIDSVRDIAIWRWDMK 1339 Query: 248 YDEWGNLLNEENPH----QLQQLIRLPGQQYDEESGLYYNRHRYYDPLQGRYITQDPIGL 303 + +GN ++P +R PGQ+YD SGL N R YD GRY+ DPIGL Sbjct: 1340 GEAFGNTPPNQDPDKDGTAFVFNLRFPGQRYDTLSGLNQNYFRDYDTSGGRYVQSDPIGL 1399 Query: 304 KGGWNFYQYP-LNPVQYIDSMGL 325 GG N Y Y NP+ Y D+ GL Sbjct: 1400 VGGLNTYAYVMGNPLMYTDAGGL 1422 Score = 50.6 bits (119), Expect = 1e-04, Method: Composition-based stats. Identities = 46/287 (16%), Positives = 76/287 (26%), Gaps = 45/287 (15%) Query: 23 LTEKTDLIPEGVIRT---DDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYLYDPLGRRV 79 + D P G+++ D + YD HRL Y D G R+ Sbjct: 760 RITRIDYWPTGLVKQITQPDGGFTAFTYDGAHRLTDIADNAGN----TVHYTLDNAGNRL 815 Query: 80 AK--------------RVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTI 125 + RV+ + L S P Y +G+ T Q Sbjct: 816 KEDTLDASGTLKRTLSRVYNQLGQLATQASAQGNPTDFGYDANGNITTITDALGHITQNH 875 Query: 126 YQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEIL 185 Y P + + T D + Q G + + + L L S Sbjct: 876 YDPLNRLASTLQDVGGIAAQTTFAYDALDHITQVTDPKGLNTTYAYNGLGDLTTLTSPDT 935 Query: 186 ---------ADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCD--------- 227 A + + + G + + + VY R Y D Sbjct: 936 GTTTYTYDSAGNRATQINARKLNTGYSYDALNRLSSAVYPDTRLNVSYTYDIAPSTCASG 995 Query: 228 ---HRGLPLALVSTEGATEWCAEYDEWGN-LLNEENPHQLQQLIRLP 270 G + G T YD +GN + + + ++R Sbjct: 996 ETYAIGRLSHMQDGSGGT--DYCYDRFGNLVRKVQTTNGKVFVLRYA 1040 Score = 47.5 bits (111), Expect = 0.001, Method: Composition-based stats. Identities = 45/258 (17%), Positives = 76/258 (29%), Gaps = 35/258 (13%) Query: 14 LYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYLYD 73 + YD +G +T TD + + HYD +RL T ++ + YD Sbjct: 852 DFGYDANGNITTITDAL---------GHITQNHYDPLNRL-ASTLQDVGGIAAQTTFAYD 901 Query: 74 PLGRRVAKR---------VWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQT 124 L + DLT S Y G+R T I + ++ T Sbjct: 902 ALDHITQVTDPKGLNTTYAYNGLGDLTTLTSPDTGTTTYTYDSAGNRATQI--NARKLNT 959 Query: 125 IYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEI 184 Y + L L + +A S G + + ++ Sbjct: 960 GYSYDALNRLSSAVYPDTRLNVSYTYDIA----PSTCASGETYAIGRLSHMQDGSGGTDY 1015 Query: 185 LADRVSEESRRWLASCGLTV-----EQMQNQMDPVYTPARKIHLYHCDHRGLPLAL-VST 238 DR R+ + G ++ + P + Y + RG + V+ Sbjct: 1016 CYDRFGNLVRKVQTTNGKVFVLRYAYTQSGKLSQLTYPDGAVVDYVRNARGQTTEVGVTP 1075 Query: 239 EGATEW----CAEYDEWG 252 G T A Y +G Sbjct: 1076 SGGTRQVLLTKATYYPFG 1093 Score = 47.5 bits (111), Expect = 0.001, Method: Composition-based stats. Identities = 44/278 (15%), Positives = 71/278 (25%), Gaps = 44/278 (15%) Query: 10 DAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESR 69 Y YDR G L K V RY Y +L T A Sbjct: 1010 SGGTDYCYDRFGNLVRKVQTTNGKVF------VLRYAYTQSGKLSQLTYPDGA----VVD 1059 Query: 70 YLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQPG 129 Y+ + G + +G + T+Y + G Sbjct: 1060 YVRNARG-----QTTEVGVTPSGGTRQVLLTKATYYPF---------GPVAGWSY----G 1101 Query: 130 SFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGG---SVVFPPVLVQMLDRLESEILA 186 + P+ RV +T + D L G D G S + P + L+ + L Sbjct: 1102 NGRPMQRV-LDHDYRPQTITDTRRDGLAVGFGFDPGGNLSALTAPGNTAAVVSLDYDALG 1160 Query: 187 D-RVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHR-----GLPLALVSTEG 240 ++ G T + N++ + + Y + G + G Sbjct: 1161 RLTAFKDGPTGTVIDGYTYDATGNRLSAKVNTITQTYAYPTNSHQLSSVGSTVRSYDATG 1220 Query: 241 ATEW------CAEYDEWGNLLNEENPHQLQQLIRLPGQ 272 T Y G L + + G Sbjct: 1221 NTTAIGGTAEQLVYGANGRLAQVKRNGVVVANYAYNGH 1258 Score = 45.9 bits (107), Expect = 0.003, Method: Composition-based stats. Identities = 37/228 (16%), Positives = 58/228 (25%), Gaps = 29/228 (12%) Query: 36 RTDDERTHRYHYDS-------------QHRLVHYTRTQYAEPLVESRYLYDPLGRRVAKR 82 RTD T Y Y S HR + A V YD GR ++ + Sbjct: 667 RTDLNDTTSYTYYSSDDSACATSPTTCTHRKGELWKVTNALGQVTEYLAYDGAGRLLSVK 726 Query: 83 VWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATG 142 + G D + ++D + Y P T L++ T Sbjct: 727 DTNGVVTDYTYHPRGWLTARKVRGSDD----STESDDRITRIDYWP---TGLVKQITQPD 779 Query: 143 ELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGL 202 A L G +V + + ++ + + R G Sbjct: 780 GGFTAFTYDGAHRLTDIADNAGNTVHYTLDNAGNRLKEDTLDASGTLKRTLSRVYNQLGQ 839 Query: 203 TVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDE 250 Q Q +P + D G + G YD Sbjct: 840 LATQASAQGNPTD--------FGYDANGNITTITDALGHIT-QNHYDP 878 >UniRef50_C5B3X8 Putative uncharacterized protein n=1 Tax=Methylobacterium extorquens AM1 RepID=C5B3X8_METEA Length = 666 Score = 150 bits (379), Expect = 9e-35, Method: Composition-based stats. Identities = 79/353 (22%), Positives = 126/353 (35%), Gaps = 62/353 (17%) Query: 11 AHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRY 70 Y Y D D I T R+ YD RL+ T P Y Sbjct: 244 ERYHYIGDGWNLTVLNNDTIAPA-------ETQRFSYDDTGRLLTAT-----GPYGSLSY 291 Query: 71 LYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQP-- 128 YD +G R+++ T Q Y +RL+++ T +++ Sbjct: 292 TYDIVGNRLSEVRTISGAITT---------QSYAYPATSNRLSSVSQGGTALRSFAYDAA 342 Query: 129 GSFTPLIRVETATG----ELAKTQRRSLADTLQQSGGEDGGSVVF--------PPVLVQM 176 GS T R TA + + + S+ +++ + DG + + P + Sbjct: 343 GSVTSDTRSGTAYAYTISQAGRIAQVSVGGSVKANYLYDGRNRLSVRQTLNMTPSGTTHL 402 Query: 177 LDRLESEIL--ADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLA 234 + + +L + + R ++ L V + P + H DH G P Sbjct: 403 IHDVWDHVLVETNGAGQAVREYIWLGDLPVAVLDGSATP---TNPTLLWVHADHLGRPEL 459 Query: 235 LVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEESGLYYNRHRYYDPLQGR 294 L + +W A+Y+ +G + + P LQ +R PGQ + ESGL YN R+YD GR Sbjct: 460 LTDASKSIKWKAQYEPFGTVWSITGPAALQ--MRFPGQWFQIESGLAYNWWRHYDSTLGR 517 Query: 295 YITQDPIGLKGGWNF-------------------YQYPL-NPVQYIDSMGLAS 327 Y DP+G+ G Y Y +P DS GL + Sbjct: 518 YTQVDPMGINQGPRGPQWASTDAPPATSDGIEGYYGYAHQSPSMNTDSTGLFA 570 Score = 41.3 bits (95), Expect = 0.073, Method: Composition-based stats. Identities = 44/270 (16%), Positives = 73/270 (27%), Gaps = 40/270 (14%) Query: 11 AHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRY 70 ++ Y+ G + KTD T Y YD+ RL+ Y ++ + Sbjct: 50 GTTIFYYNARGLMISKTDAR---------NVTVNYRYDAAGRLIG---RAYPSEVLNETF 97 Query: 71 LYDPL-------GRRVAKRVWRRERDLT---------GWMSLSRKPQVTWYGWDGD---R 111 YD + GR + + ++ Y +D R Sbjct: 98 TYDEVSAGAIGKGRLTSMKDAAGSSRYFFDSAGRVSGEIRTIGSANHTVSYTYDASGSGR 157 Query: 112 LTTIQNDRTR-IQTIYQP-GSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVF 169 L ++ R I Y G + +AT + G G+ + Sbjct: 158 LISMTYPSGRIISYGYDALGRTNYVGLKNSATSIEQQIVSWVGYFPFGPVRGISFGNGLN 217 Query: 170 PPVLVQMLDRLESEILADRVSEES--RRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCD 227 RL+ L S R+ + N ++ D Sbjct: 218 MWSNRSTEYRLDGLFLDQASGGPSLVERYHYIGDGWNLTVLNNDTIAPAETQRFSY---D 274 Query: 228 HRGLPLALVSTEGATEWCAEYDEWGNLLNE 257 G L G+ YD GN L+E Sbjct: 275 DTGRLLTATGPYGSL--SYTYDIVGNRLSE 302 >UniRef50_A9EW02 Conserved exported carbohydrate-binding protein,Rhs family n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=A9EW02_SORC5 Length = 1310 Score = 150 bits (379), Expect = 1e-34, Method: Composition-based stats. Identities = 80/370 (21%), Positives = 137/370 (37%), Gaps = 32/370 (8%) Query: 11 AHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRY 70 A Y Y H RL E D + Y D + R++ R E Y Sbjct: 889 AERRYVYGPHARLLESFDADRGRRV---------YRRDLRGRILSCARATGTEV-----Y 934 Query: 71 LYDPLGRRVAKRVWRRERDLTGWMSLSR-----KPQVTWYGWDGDRLTTIQNDRTRIQTI 125 YD G V W +RD L + + +D R T + + T Sbjct: 935 AYDAAGSVV----WAGDRDPATPWGLRPGNVLVRTDRARFTYDARRRRTTRTESDGSVTE 990 Query: 126 YQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEIL 185 Y L V+ +G + + ++++ P + ++ + L Sbjct: 991 YLWDCRNQLREVKLPSGVRVLFKYDAFGRRVRKTIVTPDADPTKAPHVRRVDFLWDYNEL 1050 Query: 186 ADRVSEE--SRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATE 243 A + E +R + + G + +Q + + + D G+P LVS G Sbjct: 1051 AAEIDSERGARSIVTARGTFLPMLQIE-------KGESYAVVPDAMGVPKELVSGRGQVA 1103 Query: 244 WCAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEESGLYYNRHRYYDPLQGRYITQDPIGL 303 W A++ WG +L EE+P ++ L G DEE+GL Y RHRY+DP R++++DP+G Sbjct: 1104 WRADHTLWGRVLAEESPAGVRAPFSLLGHYVDEETGLAYVRHRYFDPETARWLSRDPLGF 1163 Query: 304 KGGWNFYQYPLNPVQYIDSMGLASKYGHLNNGGYGARPNKPPTPDPSKLPDIAKQLRLPY 363 GG N + + P + +D +GL ++ + R + + Y Sbjct: 1164 DGGPNLFGFDGMPTEEVDPLGLMTRADFVQFMRQYRRQRIQAQRASDQAQSQIGTSHVVY 1223 Query: 364 PIDQASSAPN 373 +D + Sbjct: 1224 SVDSRGNRGQ 1233 Score = 64.1 bits (154), Expect = 1e-08, Method: Composition-based stats. Identities = 42/249 (16%), Positives = 78/249 (31%), Gaps = 43/249 (17%) Query: 3 PDNRIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYA 62 P N + R + YD D Y +D +++L Sbjct: 958 PGNVLVRTDRARFTYDA---------RRRRTTRTESDGSVTEYLWDCRNQLREVKLPSG- 1007 Query: 63 EPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRL-TTIQNDRTR 121 V + YD GRRV K + + D T + + + WD + L I ++R Sbjct: 1008 ---VRVLFKYDAFGRRVRKTIVTPDADPTK----APHVRRVDFLWDYNELAAEIDSERGA 1060 Query: 122 IQTIYQPGSFTPLIRVE-------------------TATGELAKTQRRSLADTLQQSGGE 162 + G+F P++++E + G++A +L + Sbjct: 1061 RSIVTARGTFLPMLQIEKGESYAVVPDAMGVPKELVSGRGQVAWRADHTLWGRVLAEESP 1120 Query: 163 DGGSVVFPPVLVQMLDRL-ESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKI 221 G F + + + + + E+ RWL+ L + N P ++ Sbjct: 1121 AGVRAPFSLLGHYVDEETGLAYVRHRYFDPETARWLSRDPLGFDGGPNLFGFDGMPTEEV 1180 Query: 222 HLYHCDHRG 230 D G Sbjct: 1181 -----DPLG 1184 Score = 62.1 bits (149), Expect = 5e-08, Method: Composition-based stats. Identities = 57/305 (18%), Positives = 94/305 (30%), Gaps = 45/305 (14%) Query: 2 WPDNRIARDAH-----YLYRYDRHGRLTEKTDLIPEGVIRTDD----------------- 39 + R+AR A + +D GR + ++ G ++ Sbjct: 315 YEGGRLARIADTAGREITFAHDPEGR-IARAEVHARGALQQAVAYAYHVDRELAAVTNAL 373 Query: 40 ERTHRYHYDSQHRLVHYTRTQYAEPLVESRYLYDPLGRRVAK-------RVWRRERDLTG 92 T Y YD+QHRLV V RY YDP +R + + + Sbjct: 374 GETDTYSYDAQHRLVAKALRSG----VVFRYTYDPDIQRCVRSTGPDRLQNVELHYETPA 429 Query: 93 WMSLSRKPQVTWYGWD--GDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRR 150 +S++ P Y +D G+ + + + T Y + LI + T GE+ T Sbjct: 430 KVSVAGNPDPWEYEFDERGNV-VSEKRVGSGSTTRYAYDADELLISITTPAGEVV-TFSY 487 Query: 151 SLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQ 210 L G V F ++ +E + + G Sbjct: 488 DEEARLVGVDGPGDRKVTFEYDGDRLAREIEGPRVTTFAWDHRGALARVTGPDGVTFAYD 547 Query: 211 MDP------VYTPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQ 264 +D V P I Y D A+ GAT E+D G ++ E + Sbjct: 548 IDAWGRLARVSGPEGAIVSYAYDAEHNLAAMTDARGATT-RLEHDAMGRVVAEIDALGRA 606 Query: 265 QLIRL 269 + Sbjct: 607 ERTTY 611 Score = 61.7 bits (148), Expect = 6e-08, Method: Composition-based stats. Identities = 45/269 (16%), Positives = 79/269 (29%), Gaps = 25/269 (9%) Query: 13 YLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYLY 72 + Y +D G + R T RY YD+ L+ T + Y Sbjct: 440 WEYEFDERGNVVS--------EKRVGSGSTTRYAYDADELLISITTPAGE----VVTFSY 487 Query: 73 DPLGRRVA-----KRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQ 127 D R V R E D P+VT + WD + Y Sbjct: 488 DEEARLVGVDGPGDRKVTFEYDGDRLAREIEGPRVTTFAWDHRGALARVTGPDGVTFAYD 547 Query: 128 PGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILAD 187 ++ L RV G + + + + + + + +++ +++ A+ Sbjct: 548 IDAWGRLARVSGPEGAIVSYAYDAEHNLAAMTDARGATTRLEHDAMGRVVAEIDALGRAE 607 Query: 188 RVSEES----RRWLASCGLTVEQMQNQMDPVY--TPARKIHL-YHCDHRGLPLALVSTEG 240 R + ++ R G +E + D V + +H + G +G Sbjct: 608 RTTYDAIGRPVRRAMRDGALIELTYDGGDNVIRSSDGAGLHNGFERCGTGRVARRTLPDG 667 Query: 241 ATEWCAEYDEWGNLLNEENPHQLQQLIRL 269 T W YD L N R Sbjct: 668 ET-WEMAYDILERLREIHNAKGEVYEYRY 695 Score = 47.1 bits (110), Expect = 0.001, Method: Composition-based stats. Identities = 52/321 (16%), Positives = 84/321 (26%), Gaps = 76/321 (23%) Query: 7 IARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLV 66 + + YD RL E + + Y YD +RLV Sbjct: 664 LPDGETWEMAYDILERLREIHNAK---------GEVYEYRYDRANRLVEEISFDGQSIRY 714 Query: 67 ESRYLY-----------------DPLGRRVAKRVWR---------RERDLTGWMSLSRKP 100 + D GR +A+ R L + P Sbjct: 715 AHSIAHEPIRIDYDDGTWIDLERDARGRVIAEHNAHFRIEYERDALGRILRAAVDEHGGP 774 Query: 101 QVTWYGW-DGDRLTTIQNDRTRIQTIYQ-----------PGSFTP--------LIRVETA 140 VT W D DR+ + D I Y GS T L+ ++ Sbjct: 775 VVTEIVWNDLDRVEKVVQDGLAITYTYDVMGRVASRTLPDGSVTKYFYDPAGGLVGLD-H 833 Query: 141 TGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSEESRRWLASC 200 GE QR + ++ G V + R+ + +L + Sbjct: 834 GGEKIAVQRDAAGLERRRYYHRSGLDVRIDYDVNDAPARIGAALLDPAGGAPVH---VAE 890 Query: 201 GLTVEQMQNQMDPVYTPARKIHLYHCDHRGLP----------LALVSTEGATEWCAEYD- 249 V ++ + R +Y D RG + G+ W + D Sbjct: 891 RRYVYGPHARLLESFDADRGRRVYRRDLRGRILSCARATGTEVYAYDAAGSVVWAGDRDP 950 Query: 250 --EW----GNLLNEENPHQLQ 264 W GN+L + + Sbjct: 951 ATPWGLRPGNVLVRTDRARFT 971 Score = 42.5 bits (98), Expect = 0.035, Method: Composition-based stats. Identities = 47/296 (15%), Positives = 76/296 (25%), Gaps = 69/296 (23%) Query: 8 ARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVE 67 AR A +D GR+ + D + R R YD+ R V A + Sbjct: 581 ARGATTRLEHDAMGRVVAEIDAL---------GRAERTTYDAIGRPVRRAMRDGALIEL- 630 Query: 68 SRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQ 127 YD + + R + T DG+ Sbjct: 631 ---TYDGGDNVIRSSDGAGLHNGFERCGTGRVARRT--LPDGE------------TWEMA 673 Query: 128 PGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILAD 187 L + A GE+ + R A+ L + DG S+ + + R++ + Sbjct: 674 YDILERLREIHNAKGEVYE-YRYDRANRLVEEISFDGQSIRYAHSIAHEPIRIDYD---- 728 Query: 188 RVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLP-LALVSTEG-----A 241 W+ ++ + + + Y D G A V G Sbjct: 729 -----DGTWIDLERDARGRVIAEHNAHFRIE-----YERDALGRILRAAVDEHGGPVVTE 778 Query: 242 TEW----------------CAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEESGLY 281 W YD G + + P YD GL Sbjct: 779 IVWNDLDRVEKVVQDGLAITYTYDVMGRVASRTLPDGSVTKY-----FYDPAGGLV 829 >UniRef50_Q2T916 Rhs1 protein n=30 Tax=Burkholderia RepID=Q2T916_BURTA Length = 1150 Score = 150 bits (379), Expect = 1e-34, Method: Composition-based stats. Identities = 75/330 (22%), Positives = 117/330 (35%), Gaps = 49/330 (14%) Query: 9 RDAHYLY-RYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQY---AEP 64 R Y YDR GRL D+ + +D+ L A P Sbjct: 810 RFEGKTYCDYDRRGRLLRMLS---------DEVGIEYFTWDAAGNLFDTAHVAGNVVACP 860 Query: 65 LVESR------YLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGD-RLTTIQN 117 R Y YD G KR E+ + WD D RL +++ Sbjct: 861 DHRMREYKGYQYEYDSWGNVSCKRSAAAEQS---------------FTWDADGRLMEVRS 905 Query: 118 DRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQML 177 + ++ Y + +K+ R D +Q+ + M Sbjct: 906 RQMLVRFRY-----------DALGRRTSKSIERLDGDHARQADSSTEITHFVWEGERIMQ 954 Query: 178 DRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVS 237 +R E EI + +++ L +D P R ++ Y D G +A+ Sbjct: 955 ERAEKEIRTFLYQPAADGFMSYAPLARVDQARDVDGTVQPMR-LYHYQVDAAGTAVAMTD 1013 Query: 238 TEGATEWCAEYDEWGNLLNEENPH-QLQQLIRLPGQQYDEESGLYYNRHRYYDPLQGRYI 296 GA W Y WG +L + + Q+ Q +R G D+E L+ N RYYDP GRY+ Sbjct: 1014 DAGALAWAGRYSAWGRILPPTSLNVQVDQPLRFAGHYADDEVRLHLNGTRYYDPDTGRYL 1073 Query: 297 TQDPIGLKGGWNFYQYPLNPVQYIDSMGLA 326 + D ++ G + Y+Y NP + G A Sbjct: 1074 SPDRT-VEPGTSPYRYVSNPQTACNPTGRA 1102 Score = 99.1 bits (245), Expect = 3e-19, Method: Composition-based stats. Identities = 43/231 (18%), Positives = 80/231 (34%), Gaps = 27/231 (11%) Query: 3 PDNRIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYA 62 PD+R+ Y Y YD G ++ K E + +D+ RL+ Q Sbjct: 860 PDHRMREYKGYQYEYDSWGNVSCKRSAAAE----------QSFTWDADGRLMEVRSRQ-- 907 Query: 63 EPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRI 122 + R+ YD LGRR +K + R + D ++T + W+G+R+ + ++ Sbjct: 908 ---MLVRFRYDALGRRTSKSIERLDGDHA--RQADSSTEITHFVWEGERIMQERAEKEIR 962 Query: 123 QTIYQPG-----SFTPLIRVETATG-----ELAKTQRRSLADTLQQSGGEDGGSVVFPPV 172 +YQP S+ PL RV+ A + + + D + Sbjct: 963 TFLYQPAADGFMSYAPLARVDQARDVDGTVQPMRLYHYQVDAAGTAVAMTDDAGALAWAG 1022 Query: 173 LVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHL 223 R+ + ++ R+ ++ Y P +L Sbjct: 1023 RYSAWGRILPPTSLNVQVDQPLRFAGHYADDEVRLHLNGTRYYDPDTGRYL 1073 Score = 56.0 bits (133), Expect = 3e-06, Method: Composition-based stats. Identities = 54/276 (19%), Positives = 86/276 (31%), Gaps = 37/276 (13%) Query: 14 LYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYLYD 73 +++DR G L+ TD + + YDS + + R +D Sbjct: 323 QWKFDRQGNLSRHTDF---------AGGRYTFAYDSAG----WPTELNLPGDRQVRITFD 369 Query: 74 PLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDG--------DRLTTIQND---RTRI 122 LGR + T + +R+P VT DG DRL I + Sbjct: 370 NLGRVTREIDPLGGERSTIYAFATREP-VTVRASDGRLWVWRHDDRLRAIHHQSPSHGAT 428 Query: 123 QTIYQPGS--FTPLIRVETATGELAKTQRR-------SLADTLQQSGGEDGGSVVFPPVL 173 Q Y T E T + RR + D + G VV Sbjct: 429 QIAYSEHERGETHSYVTERGTSITIERDRRGQVIGLGTAPDKATTYRRDAEGRVVEIIDP 488 Query: 174 VQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPL 233 + + ++E+++L + V Q+ V P L+H D G + Sbjct: 489 LGAITKIENDLLGRPLIVTLPG--GRQERRVWNAAGQIIKVTGPDGHARLWHRDPYGRVV 546 Query: 234 ALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRL 269 V EG+ EYD G + + + Q Sbjct: 547 QFVDEEGSVTAH-EYDAHGRRIRTVSGNGATQEFEW 581 Score = 46.3 bits (108), Expect = 0.003, Method: Composition-based stats. Identities = 42/271 (15%), Positives = 78/271 (28%), Gaps = 50/271 (18%) Query: 8 ARDAHYLYRYDRHGRLTEKTDLIPE------------GVIRTDDERTHRYHYDSQHRLVH 55 A D YR D GR+ E D + ++ R R +++ +++ Sbjct: 467 APDKATTYRRDAEGRVVEIIDPLGAITKIENDLLGRPLIVTLPGGRQERRVWNAAGQIIK 526 Query: 56 YTRTQYA-----------------EPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSR 98 T E + + YD GRR+ ++S Sbjct: 527 VTGPDGHARLWHRDPYGRVVQFVDEEGSVTAHEYDAHGRRIR--------------TVSG 572 Query: 99 KPQVTWYGWD-GDRLTTIQNDRTRIQTI-YQPGSFTPLIRVETATGELAKTQRRSLADTL 156 + W DRL +I + + + Y + L +V T T E + + D L Sbjct: 573 NGATQEFEWGPADRLVSIVDADRVTRALGYSMAGW--LQQVVT-TAESMTRREIFVHDAL 629 Query: 157 QQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYT 216 + G + + Q L + + + + E + Sbjct: 630 GRLIGRETEHAHYHYAYTQQG--LLGTVDCSPTEAGEAIGVVADNIRFEYNPFGLVTAEH 687 Query: 217 PARKIHLYHCDHRGLPLALVSTEGATEWCAE 247 + + Y D RG A+ +G Sbjct: 688 GSAGVLHYEYDARGRTSAVTLPDGCVVKSER 718 Score = 44.4 bits (103), Expect = 0.010, Method: Composition-based stats. Identities = 50/283 (17%), Positives = 82/283 (28%), Gaps = 41/283 (14%) Query: 14 LYRYDRHGRLTEKTDLIPEGVIR------------TDDERTHRYHYD---SQHRLVHYTR 58 Y YD G+L E + I + V R +T +Y +D R++ + Sbjct: 236 HYGYDDDGQLAEVRNRIGDVVRRFTYENGRIVQEVGPLGQTTQYKWDVRRGAARVIERST 295 Query: 59 TQYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQND 118 + A R+ YDP R + + T + G R T + Sbjct: 296 CRGARD----RFNYDPDEGRCEVIDTFGHAAQWKFDRQGNLSRHTDFA--GGRYTFAYDS 349 Query: 119 RTRIQTIYQPG------SFTPLIRVET---ATGELAKTQRRSLADTLQQSGGEDGGSVVF 169 + PG +F L RV G T DG V+ Sbjct: 350 AGWPTELNLPGDRQVRITFDNLGRVTREIDPLGGERSTIYAFATREPVTVRASDGRLWVW 409 Query: 170 PPVLVQMLDRLESE-------ILADRVSEESRRWLASCGLTVEQMQNQMDPV---YTPAR 219 +S ++ E+ ++ G ++ +++ V T Sbjct: 410 RHDDRLRAIHHQSPSHGATQIAYSEHERGETHSYVTERGTSITIERDRRGQVIGLGTAPD 469 Query: 220 KIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQ 262 K Y D G + ++ GA E D G L P Sbjct: 470 KATTYRRDAEGRVVEIIDPLGAIT-KIENDLLGRPLIVTLPGG 511 Score = 44.4 bits (103), Expect = 0.011, Method: Composition-based stats. Identities = 42/263 (15%), Positives = 75/263 (28%), Gaps = 30/263 (11%) Query: 17 YDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYLYDPLG 76 +D GRL E Y D + RL + Y YD G Sbjct: 192 WDDAGRLKRMRGTC-------GHELKMHYGNDGR-RLTGIECVDGGPTGLLVHYGYDDDG 243 Query: 77 ------RRVAKRVWRRERDLTG-WMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQPG 129 R+ V R + + Q T Y WD R +R+ + Sbjct: 244 QLAEVRNRIGDVVRRFTYENGRIVQEVGPLGQTTQYKWDVRRGAARVIERSTCRGARDRF 303 Query: 130 SFTPL-IRVETATGELAKTQRR-SLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILAD 187 ++ P R E Q + L + GG F L Sbjct: 304 NYDPDEGRCEVIDTFGHAAQWKFDRQGNLSRHTDFAGGRYTFAYDSAGWPTELNLPG--- 360 Query: 188 RVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWCAE 247 R + + ++ ++DP+ I+ + P+ + +++G W Sbjct: 361 ------DRQVRITFDNLGRVTREIDPLGGERSTIYAFATRE---PVTVRASDGRL-WVWR 410 Query: 248 YDEWGNLLNEENPHQLQQLIRLP 270 +D+ ++ ++P I Sbjct: 411 HDDRLRAIHHQSPSHGATQIAYS 433 Score = 41.7 bits (96), Expect = 0.055, Method: Composition-based stats. Identities = 49/302 (16%), Positives = 87/302 (28%), Gaps = 81/302 (26%) Query: 10 DAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYA------- 62 + + Y+ G +T + Y YD++ R T Sbjct: 670 ADNIRFEYNPFGLVTAE----------HGSAGVLHYEYDARGRTSAVTLPDGCVVKSERD 719 Query: 63 --------------EPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTW-YGW 107 E + + YD LGR +V R + +L + ++ + Sbjct: 720 EAGCVALIGMTCREESRGIAAFRYDNLGR----QVLRSQGELYLRSVYTSTSELERCFAM 775 Query: 108 DGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSV 167 + R TP ++ + + + S+A + Q G Sbjct: 776 NVVR--------------------TPNNEMQAGEIQYWREFQYSIAGNVTQVADRFEGKT 815 Query: 168 VFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCD 227 L R+ L+D V E W A+ G + + V P ++ Y Sbjct: 816 YCDYDRRGRLLRM----LSDEVGIEYFTWDAA-GNLFDTAHVAGNVVACPDHRMREY--- 867 Query: 228 HRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRL--PGQQYDEESGLYYNRH 285 +G EYD WGN+ + + +Q G+ + S R Sbjct: 868 -----------KGY---QYEYDSWGNVSCKRSAAA-EQSFTWDADGRLMEVRSRQMLVRF 912 Query: 286 RY 287 RY Sbjct: 913 RY 914 >UniRef50_B1ZNT0 YD repeat protein n=1 Tax=Opitutus terrae PB90-1 RepID=B1ZNT0_OPITP Length = 2003 Score = 150 bits (378), Expect = 1e-34, Method: Composition-based stats. Identities = 73/343 (21%), Positives = 106/343 (30%), Gaps = 45/343 (13%) Query: 7 IARDAHYLYRYDRHGRLTEKTDLIPEG--------VIRTDDERT--------HRYHYDSQ 50 +A Y YD G+L T+ + G RT Y YD+ Sbjct: 995 LANGLTATYAYDTAGQLLVLTNALASGGTLSRFAYAYNDRGRRTAMETLEGRWTYDYDAL 1054 Query: 51 HRLVHY---TRTQYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWM--SLSRKPQVTW- 104 +L + P + Y+YD LG R+ + + R T+ Sbjct: 1055 GQLTRAAFASTNPAVVPNQDLAYVYDALGNRIRTVENGVTTEYSSNNLNQYVRTGDTTYR 1114 Query: 105 YGWDGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDG 164 + DG+ + + T T + R T S Sbjct: 1115 FDADGNLVQEATAETTTTYTYDDENRLVAVRR---------GTDTWSYGYDAFGGRVTSS 1165 Query: 165 GSVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLY 224 + V ++ + D E R+ GL PA Y Sbjct: 1166 ENGVTTRFVLDPIGLGNVVGEYDAAGELIARYDHGFGLLA---------RADPAGIEAYY 1216 Query: 225 HCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQ--YDEESGLYY 282 D G +V+ G Y +G L+ L + GQ E SGL + Sbjct: 1217 AFDALGSVQQVVTAAGEVANRYTYAPFGGLIGRT--ETLPNPFQFVGQVGVMSESSGLGF 1274 Query: 283 NRHRYYDPLQGRYITQDPIGLKGGWNFYQYPLN-PVQYIDSMG 324 R R+Y GR+I DPIGL GG N Y Y +N P+ D G Sbjct: 1275 MRARFYSGQCGRFIQADPIGLAGGLNLYAYTMNDPIGVDDPSG 1317 Score = 67.1 bits (162), Expect = 2e-09, Method: Composition-based stats. Identities = 50/289 (17%), Positives = 77/289 (26%), Gaps = 37/289 (12%) Query: 15 YRYDRHGRLT--------EKTDLIPEGVI-RTDDERTH--RYHYDSQHRLVHYTRTQYAE 63 + YD GR+T + G++ RT+D H + +D +H LV T Sbjct: 730 FAYDSAGRVTVTDALGHATRHFFDYRGLLARTEDALGHPVQMTFDDEHNLVELTDPAGGS 789 Query: 64 PLVESRYLYDPLGRRVA--------KRVWRRERDLTGWMSLSRKPQVTWYGWD--GDRLT 113 RY YD G + R K +T Y + GD + Sbjct: 790 ----YRYTYDSKGNVIEAADPLGATTRFAHAGAFNRLASVTDAKANLTRYTYTTEGDLQS 845 Query: 114 TIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVL 173 D + + Y T R L F + Sbjct: 846 ITYADGSVERWTYDANGN---ASGWTNRRGRTIAYARDNDGRLTTKTLAGESRTTFDYDV 902 Query: 174 VQMLDRLESEILADRVSEESRRWL----ASCGLTVEQMQNQMDPVYTPARKIHL---YHC 226 L R ++R WL G ++ + T ++ Y Sbjct: 903 RGNLTSTTDATGTTRFDYDARDWLTRITYPTGPWLQFTYDAAGRRATSLDQLGHRLNYGY 962 Query: 227 DHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRL--PGQQ 273 D G L +G +D G L + + L GQ Sbjct: 963 DAAGRLEQLTDEQGRRIVHYTFDAAGRLAGKTLANGLTATYAYDTAGQL 1011 Score = 62.9 bits (151), Expect = 2e-08, Method: Composition-based stats. Identities = 52/282 (18%), Positives = 80/282 (28%), Gaps = 46/282 (16%) Query: 11 AHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYH--YDSQHRLVHYTRTQYAE----- 63 Y Y YD G + E D + +R D++ L YT T + Sbjct: 788 GSYRYTYDSKGNVIEAADPLGATTRFAHAGAFNRLASVTDAKANLTRYTYTTEGDLQSIT 847 Query: 64 --PLVESRYLYDPLG-------RRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTT 114 R+ YD G RR + R+ D T + +D R Sbjct: 848 YADGSVERWTYDANGNASGWTNRRGRTIAYARDNDGRLTTKTLAGESRTTFDYD-VRGNL 906 Query: 115 IQNDRTRIQTIYQPGSFTPLIRVETATGELAK--------------------TQRRSLAD 154 T + + L R+ TG + A Sbjct: 907 TSTTDATGTTRFDYDARDWLTRITYPTGPWLQFTYDAAGRRATSLDQLGHRLNYGYDAAG 966 Query: 155 TLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPV 214 L+Q E G +V RL + LA+ ++ A L + + Sbjct: 967 RLEQLTDEQGRRIVHY--TFDAAGRLAGKTLANGLTATYAYDTAGQLLVLTNALASGGTL 1024 Query: 215 YTPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLN 256 + + D RG A+ + EG W +YD G L Sbjct: 1025 ----SRFAYAYND-RGRRTAMETLEGR--WTYDYDALGQLTR 1059 Score = 47.5 bits (111), Expect = 0.001, Method: Composition-based stats. Identities = 56/323 (17%), Positives = 85/323 (26%), Gaps = 48/323 (14%) Query: 6 RIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPL 65 R A Y Y+ + I YD+ RL + + AE L Sbjct: 672 RYASGQEIGYEYNT---IAGAPGEHALTQINESGGTHKSVSYDAAGRLAGTSLSSGAEAL 728 Query: 66 VESRYLYDPLGRR-VAKRVWRRERDLTGWMSLSRKPQ-----VTWYGWDGDRLTTIQNDR 119 + YD GR V + R + L + + +D + D Sbjct: 729 G---FAYDSAGRVTVTDALGHATRHFFDYRGLLARTEDALGHPVQMTFDDEHNLVELTDP 785 Query: 120 TRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDR 179 Y S V A L T R + A + Sbjct: 786 AGGSYRYTYDS---KGNVIEAADPLGATTRFAHAGAFNRLASVTDAKANLTRYTYTTEGD 842 Query: 180 LESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTE 239 L+S AD E RW N+ + Y D+ G Sbjct: 843 LQSITYADGSVE---RWTYDANGNASGWTNR-------RGRTIAYARDNDGRLTTKT-LA 891 Query: 240 GATEWCAEYDEWGNLLN----------EENPHQLQQLIRLPGQQYDEESGLYYNRHRYYD 289 G + +YD GNL + + + I P + + + YD Sbjct: 892 GESRTTFDYDVRGNLTSTTDATGTTRFDYDARDWLTRITYPTGPWLQFT---------YD 942 Query: 290 PLQGRYITQDPIGLKGGWNFYQY 312 R + D +G + N Y Y Sbjct: 943 AAGRRATSLDQLGHR--LN-YGY 962 Score = 46.3 bits (108), Expect = 0.002, Method: Composition-based stats. Identities = 42/247 (17%), Positives = 68/247 (27%), Gaps = 37/247 (14%) Query: 5 NRIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEP 64 N+ R YR+D G L ++ DD ++RLV R Sbjct: 1103 NQYVRTGDTTYRFDADGNLVQEATAETTTTYTYDD----------ENRLVAVRRGTD--- 1149 Query: 65 LVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTT--------IQ 116 Y YD G RV + V Y G+ + + Sbjct: 1150 --TWSYGYDAFGGRVT-SSENGVTTRFVLDPIGLGNVVGEYDAAGELIARYDHGFGLLAR 1206 Query: 117 NDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQM 176 D I+ Y + + +V TA GE+A + L F + M Sbjct: 1207 ADPAGIEAYYAFDALGSVQQVVTAAGEVANRYTYAPFGGLIGRTETLPNPFQFVGQVGVM 1266 Query: 177 LDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALV 236 + + +R + CG + Q DP+ + P+ + Sbjct: 1267 SESSGLGFM------RARFYSGQCGRFI-----QADPIGLAGGLNLYAYT--MNDPIGVD 1313 Query: 237 STEGATE 243 G Sbjct: 1314 DPSGKFV 1320 >UniRef50_C0B4J4 Putative uncharacterized protein n=3 Tax=Coprococcus comes ATCC 27758 RepID=C0B4J4_9FIRM Length = 558 Score = 150 bits (378), Expect = 1e-34, Method: Composition-based stats. Identities = 79/369 (21%), Positives = 127/369 (34%), Gaps = 63/369 (17%) Query: 12 HYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYL 71 Y YD G + E + TD Y Y ++++ R + A Y Sbjct: 103 ETAYTYDGRGNILEICTKELDTGKVTDHML---YTYTGMNQVI---REEDAVRGRTFTYA 156 Query: 72 YDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWY--GWDGDRLTTIQNDRTRIQTIYQPG 129 YD G + ++ L + R Y GW D+LT+ + P Sbjct: 157 YDLGGNLLE----NKKYYLVNGVEELRGTDTYTYSSGWK-DQLTSFNGKAITYDAMGNPL 211 Query: 130 SFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRV 189 S+ + L G ++ L Q + + + V Sbjct: 212 SY--------------------MGMNLTWEKGRQLKTLKKSGTLSQYVYDNDGRRIQKTV 251 Query: 190 SEESRRWLASCGLTVEQMQNQM-------DPVYTP-----ARKIHLYHCDHRGLPLALVS 237 ++ R+ + Q + D TP K++ Y +G + +V Sbjct: 252 GDKVIRFYLDGDKIIAQKEEGGERMDFLYDEKGTPFAFEYQGKMYFYQTSLQGDIIGIVD 311 Query: 238 TEGATEWCAEYDEWGNLLNEENPHQLQ----QLIRLPGQQYDEESGLYYNRHRYYDPLQG 293 +EG+ YD WG +L + +R G YD+E+GLYY + RYYDP Sbjct: 312 SEGSQVVVYRYDAWGEVLVSSDASGFGLSQINPLRYRGYYYDQETGLYYLQTRYYDPKVR 371 Query: 294 RYIT--------QDPIGLKGGWNFYQYP-LNPVQYIDSMGLASKYGHLNNGGYGARPNKP 344 R++ +DP L N Y Y NPV Y D G+ + +G +GA N Sbjct: 372 RFLNADDASVLTKDPEQLTE-KNLYAYCDDNPVMYRDDTGMF----DIVSGIFGAVTNVA 426 Query: 345 PTPDPSKLP 353 T +K+ Sbjct: 427 TTYFAAKVT 435 >UniRef50_Q39VL5 YD repeat protein n=2 Tax=Geobacter metallireducens GS-15 RepID=Q39VL5_GEOMG Length = 2294 Score = 149 bits (377), Expect = 2e-34, Method: Composition-based stats. Identities = 74/373 (19%), Positives = 123/373 (32%), Gaps = 36/373 (9%) Query: 14 LYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTR--TQYAEPLVESRYL 71 Y YD GR+ + T + RY +D+ +RL + P+ + Sbjct: 1870 TYTYDDAGRMLDLTHF---------NNTYTRYTHDNANRLTALENRLSNAGSPIATYAFT 1920 Query: 72 YDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQPGSF 131 D G R T ++L+ T + + + Q T + Sbjct: 1921 LDGNGNRTG-------VTQTVPIALNATASNTNFTMNLQKNRLAQAGSTSFTYDNEGQLA 1973 Query: 132 TPLIRVET-ATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVS 190 T + T S++ + G + V + + +LA+ Sbjct: 1974 TRTGDIYTFDDAHRLTNITGSVSYQYKYDGAGNRLEATRNGVTTRYIYDANGNLLAEADG 2033 Query: 191 EESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDE 250 + G N + + + + YH D G +AL Y Sbjct: 2034 TNAITRYYIYG-------NGLLAMVASGNQPYCYHFDATGHTVALTDAGANVVNRYAYTP 2086 Query: 251 WGNLLNEENPHQLQQLIRLPGQQ--YDEESGLYYNRHRYYDPLQGRYITQDPIGLKGG-W 307 +G + N++ + Q + G+ E +G YY R RYYD GR+I++DP G GG Sbjct: 2087 FGAIGNQQ--ETISQPFKYVGKYGVMSEPNGFYYMRARYYDASVGRFISEDPKGFDGGDV 2144 Query: 308 NFYQYP-LNPVQYIDSMGLA--SKYGHLNNGGYGARPNKPPTPD--PSKLPDIAKQLRLP 362 N Y NPV ID GL+ K +L N G + + + A Q Sbjct: 2145 NLMVYVGNNPVMLIDPNGLSAFGKIWNLPNTLLGLAWGGIGMLGGAHASIGNNAIQFEKH 2204 Query: 363 YPIDQASSAPNVF 375 + A + N Sbjct: 2205 PFMFGAITLGNTI 2217 Score = 54.8 bits (130), Expect = 7e-06, Method: Composition-based stats. Identities = 41/261 (15%), Positives = 75/261 (28%), Gaps = 44/261 (16%) Query: 5 NRIARDAHYLYRYDRHGRLTEKTDLI-----PEGVIRTDDERTHRYHYDSQHRLVHYTRT 59 NR+A+ + YD G+L +T I + +++Y YD + TR Sbjct: 1954 NRLAQAGSTSFTYDNEGQLATRTGDIYTFDDAHRLTNITGSVSYQYKYDGAGNRLEATR- 2012 Query: 60 QYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDR 119 V +RY+YD G +A+ +Y + L + + Sbjct: 2013 ----NGVTTRYIYDANGNLLAEADGTNAI-------------TRYYIYGNGLLAMVASGN 2055 Query: 120 TRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDR 179 + T A + A T + G ++ P V Sbjct: 2056 QPYCYHFDATGHT------VALTDAGANVVNRYAYTPFGAIGNQQETISQPFKYVGKYGV 2109 Query: 180 LESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTE 239 + +R + AS G + + D + + P+ L+ Sbjct: 2110 MSEP--NGFYYMRARYYDASVGRFISEDPKGFDG--GDVNLMVYVGNN----PVMLIDPN 2161 Query: 240 GATEWCAEYDEWGNLLNEENP 260 G +G + N N Sbjct: 2162 G-------LSAFGKIWNLPNT 2175 Score = 51.3 bits (121), Expect = 8e-05, Method: Composition-based stats. Identities = 49/275 (17%), Positives = 76/275 (27%), Gaps = 46/275 (16%) Query: 17 YDRHGRLTEKTDLIPEG-------------VIRTDDERTHRYHYDSQHRLVHYTRTQYAE 63 YD G++ +T G + YH+D Q L+ T Sbjct: 1511 YDAFGQVQSQTMPRQTGTATYNLYFNGYRNIEEDGTGHQTIYHFDEQKHLLGVENTLG-- 1568 Query: 64 PLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQ 123 +RY YD G VA+ + T Y +DG+ T D Sbjct: 1569 -QRTTRY-YDGQGHVVAET--------------DPRGFSTGYLYDGNHNLTRVTDPFIRY 1612 Query: 124 TIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESE 183 T S L V G T + ++ + G ++ + + Sbjct: 1613 TDTTYDSQFRLTDVTDPLGHTTHTDYDTKHHPVKTTVYPATGQSIYTQKSYYANGLVNTT 1672 Query: 184 ILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATE 243 V + T + P T Y D G +L EGA Sbjct: 1673 TDGRGVITTLTQDTYGNPAT---SKTSTAPAIT-------YVYDGIGRMTSLTDQEGAKT 1722 Query: 244 WCAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEES 278 YD+ L + L + L YD+ + Sbjct: 1723 -SFTYDK--RSLPTGSTDPLTKNTSLT--YYDDGT 1752 Score = 50.6 bits (119), Expect = 1e-04, Method: Composition-based stats. Identities = 42/270 (15%), Positives = 77/270 (28%), Gaps = 37/270 (13%) Query: 18 DRHGRLTEKTDLIPEGVIRTD-DERTHRYHYDSQHRLVHYTRTQYAEPLVESRYLYDPLG 76 D+ GR + TD + + Y YD+ HR++ + + YD G Sbjct: 1459 DKAGRSVAYGYTGTDLTTYTDPEGKVWTYGYDTSHRILTLKNPRTVTTVTNV---YDAFG 1515 Query: 77 RRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQPGSFTPLIR 136 + ++ + R+ T + ++G R I+ D T QTIY L+ Sbjct: 1516 QVQSQTMPRQTGTATYNLY-----------FNGYRN--IEEDGTGHQTIYHFDEQKHLLG 1562 Query: 137 VETATGELAKTQRRSLADTLQQS-----------GGEDGGSVVFPPVLVQMLDRLESEIL 185 VE G+ + ++ G + V P + +S+ Sbjct: 1563 VENTLGQRTTRYYDGQGHVVAETDPRGFSTGYLYDGNHNLTRVTDPFIRYTDTTYDSQFR 1622 Query: 186 ----ADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGA 241 D + + + V+ +K + GL G Sbjct: 1623 LTDVTDPLGHTTHTDYDTKHHPVKTTVYPATGQSIYTQKSYY----ANGLVNTTTDGRG- 1677 Query: 242 TEWCAEYDEWGNLLNEENPHQLQQLIRLPG 271 D +GN + G Sbjct: 1678 VITTLTQDTYGNPATSKTSTAPAITYVYDG 1707 >UniRef50_Q8PMX0 Wall-associated protein n=2 Tax=Xanthomonas RepID=Q8PMX0_XANAC Length = 1199 Score = 149 bits (376), Expect = 2e-34, Method: Composition-based stats. Identities = 69/352 (19%), Positives = 113/352 (32%), Gaps = 39/352 (11%) Query: 6 RIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPL 65 R A + Y+YD +G + D + YD RL+ ++ Sbjct: 739 RDNNVASFEYQYDANGNVGAIIDQ------QRGTGYNRYMGYDGLDRLMEAGSERFGGDN 792 Query: 66 VESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTI 125 RY YD L + + WY +RLT +QN+ Sbjct: 793 WN-RYTYDVLDN------------ILTAKLPGVRENNYWYDAK-NRLTNVQNNAGATTVG 838 Query: 126 YQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEIL 185 S+ P ++ G+ + + +G E + + + + Sbjct: 839 L---SYDPQGNLKNKNGQAYTFDYGNRLRDV--TGKESYAYDAYGRRTIAGRPTTRTVQV 893 Query: 186 ADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWC 245 + + + G N + I H D G P+A+ T G Sbjct: 894 YTQAGQLFYTEASGKGNMEYVYLNGSLLATRNSGTIKFQHTDALGSPIAVTDTAGQVVER 953 Query: 246 AEYDEWGNLLNEENPHQLQQLIRLPGQQYDEESGLYYNRHRYYDPLQGRYITQDPIG--- 302 +Y +G+ + + I G D +GL Y + RYYD GR+++ DP+ Sbjct: 954 TDYQPYGSPIGKTVDG-----IGYTGHAMDGATGLTYMQQRYYDQDLGRFLSVDPVAADS 1008 Query: 303 -LKGGWNFYQYP-LNPVQYIDSMGLASKYGHLNNGGYGARPNKPPTPDPSKL 352 +N Y Y NP ++ D G S YGA DP KL Sbjct: 1009 VFAANFNRYWYANNNPYKFTDPDGRQSAADRY----YGAAVGYMLRNDPEKL 1056 Score = 43.3 bits (100), Expect = 0.024, Method: Composition-based stats. Identities = 41/297 (13%), Positives = 81/297 (27%), Gaps = 44/297 (14%) Query: 45 YHYDSQHRLVHYTRTQYAEPLVESRYLYDPLGRRV-----AKRVWRRERDLTGWMSLSRK 99 Y YD+ +L + ++ YD G DL + R+ Sbjct: 531 YVYDANQQLCKVIEPESGSTVM----AYDAAGNLAWSASGLDLPSTTSCDLEAAAASGRQ 586 Query: 100 PQVTWYGWDGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQS 159 T+ + + + Y P + G + + + Sbjct: 587 VVRTYDTRNRLKTLRFPDKNGNQDWSYTPDGLPAQVTTWNDAGSSSVVNAYNYNKRRMLT 646 Query: 160 GGEDGGSVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYT--- 216 G + + + D + + S + + +++Q VY Sbjct: 647 SESSGQTGWYTWSIGYGYDANGALASQAYPTGLSINYAPNALGQPTDVRDQFGNVYASGI 706 Query: 217 ------PARKIHL-------YHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQL 263 AR+ + R +P + + +YD GN+ + + Sbjct: 707 GYYPNGAARQFTYGNGVSHSLVLNGRQMPQQVRDNN-VASFEYQYDANGNVGAIIDQQRG 765 Query: 264 QQLIRLPGQQYDEESGLYYNRHRYYDPLQGRYITQDPIGLKGGWNFYQYPLNPVQYI 320 R G YD GL R + R+ GG N+ +Y + + I Sbjct: 766 TGYNRYMG--YD---GLD----RLMEAGSERF---------GGDNWNRYTYDVLDNI 804 >UniRef50_Q1CXS7 Putative uncharacterized protein n=1 Tax=Myxococcus xanthus DK 1622 RepID=Q1CXS7_MYXXD Length = 3146 Score = 149 bits (375), Expect = 2e-34, Method: Composition-based stats. Identities = 65/345 (18%), Positives = 108/345 (31%), Gaps = 27/345 (7%) Query: 7 IARDAHYLYRYDRHG-RLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPL 65 +A + + Y YD +G RL + Y YD +RL L Sbjct: 2454 VAMVSRHAYSYDGNGNRLVQIAVRTSPSTQELGSPEFTEYGYDVLNRLTGVKAPDGQASL 2513 Query: 66 VESRYLYDPLGRRVAKRVW-----------RRERDLTGWMSLSRKPQVTWYGWDGD-RLT 113 Y +D +G R +R L ++ W + R Sbjct: 2514 ----YRWDAVGNRTGERRAPSLAVSGLGPDSYNTVLAHEVTYDVVGIFNRVDWLRNLRDL 2569 Query: 114 TIQNDRTRIQTIYQPGSFTPLIRVETAT-GELAKTQRRSLADTLQQSGGEDGGSVVFPPV 172 + ++ T + ++ D + G D + + + Sbjct: 2570 KDATKHVSLGYDLAGNITQKTVQASTRAFVWDVRNTLTAVYDNGVEVGRYDYDANLQRTM 2629 Query: 173 LVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVY---TPARKIHLYHCDHR 229 +E + V +E+ T + P+ P+ + D Sbjct: 2630 RHTAAGNVEYVLDGAFVLQEADGSQIHRP-TQRRYHYGEGPIAVSEAPSASLSFLGMDAL 2688 Query: 230 GLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEESGLYYNRHRYYD 289 G +++ G EYD WGN + P + G QYD E+GL Y R RYYD Sbjct: 2689 GSVTDVLNVIGQVTAAREYDAWGNYRSGSAPSVSDFKLGFTGHQYDVETGLTYARARYYD 2748 Query: 290 PLQGRYITQDPIGL----KGGWNFYQYPL-NPVQYIDSMGLASKY 329 GR+I++D + Y Y NP++Y D G + Sbjct: 2749 SDLGRFISRDSYEGKSDDAPSLHRYAYAYANPLRYSDPTGHCVNF 2793 Score = 67.5 bits (163), Expect = 1e-09, Method: Composition-based stats. Identities = 47/269 (17%), Positives = 79/269 (29%), Gaps = 43/269 (15%) Query: 17 YDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYLYDPLG 76 YD GRL E +L+ G + DE + YD+ +L + + + RY YD LG Sbjct: 2059 YDGAGRLIE--ELLAAGSL---DEAKTTFQYDAAGQLTQTKGPRVTGSVFDFRYTYDDLG 2113 Query: 77 RRVAKRVWRRERDLTGWMSLSRK---------PQVTWYGWDGDRLTTIQNDRTRIQTIYQ 127 RRV + + + ++ K P + G L ++ + + + Sbjct: 2114 RRVREENALNQVTAWAYDAVGNKVCAKQPLGQPSLAHGAASGMSLAQLEANACGGTYVTR 2173 Query: 128 PGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILAD 187 G E A+ L + ++V + L E ++ Sbjct: 2174 FG----------YEEEGRLVSVTDAANGLYSYVYDAARNMVAKQDANENLTTYEYDVRNL 2223 Query: 188 RVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWCAE 247 R +E + Q P++ P S G W Sbjct: 2224 RSAEHQH---LDAHSRLTSAQRDSVPLFESGA-----------TP---TSNTGTLTWRHT 2266 Query: 248 YDEWGNLLNEENPHQLQQLIRLPGQQYDE 276 YD GN Q + D Sbjct: 2267 YD--GNRNEASRVDPKGQRVEFAHGLLDR 2293 Score = 59.4 bits (142), Expect = 3e-07, Method: Composition-based stats. Identities = 47/277 (16%), Positives = 81/277 (29%), Gaps = 35/277 (12%) Query: 11 AHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRY 70 A ++YD G+LT+ +G T RY YD R V R + A V + + Sbjct: 2078 AKTTFQYDAAGQLTQ-----TKGPRVTGSVFDFRYTYDDLGRRV---REENALNQVTA-W 2128 Query: 71 LYDPLGRRV-AKRVWRRERDLTGWMS----------LSRKPQVTWYGWDGDRLTTIQNDR 119 YD +G +V AK+ + G S VT +G++ + D Sbjct: 2129 AYDAVGNKVCAKQPLGQPSLAHGAASGMSLAQLEANACGGTYVTRFGYEEEGRLVSVTDA 2188 Query: 120 TRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDR 179 Y + ++ + A L + + D S + + Sbjct: 2189 ANGLYSYVYDAARNMVAKQDANENLTTYEYDVRNLRSAEHQHLDAHSRLTSAQRDSVPLF 2248 Query: 180 LESEILADRVSEESRRWLASCGLTV--------EQMQNQMDPVYTPARKIHLYHCDHRGL 231 + R ++++ + A + + H Sbjct: 2249 ESGATPTSNTGTLTWRHTYDGNRNEASRVDPKGQRVEFAHGLLDRLASRTYSQHA----T 2304 Query: 232 PLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIR 268 P S + YD GNL E Q +R Sbjct: 2305 PREFPSVDSEVL---TYDPNGNLTGESQSKQTTNGVR 2338 Score = 58.7 bits (140), Expect = 5e-07, Method: Composition-based stats. Identities = 54/285 (18%), Positives = 83/285 (29%), Gaps = 56/285 (19%) Query: 6 RIARDAHYL--YRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAE 63 R+ YRYD G T D D Y YD+ RL H T E Sbjct: 2355 RLREYDGKQVSYRYDALGSRTRVEDS---------DAVATTYMYDALGRLTHAT---LPE 2402 Query: 64 PLVESRY-------------------LYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTW 104 +VE RY YD G R+++ V + S+ Sbjct: 2403 GVVEYRYWPDSLLKGVTWPNGISEGRCYDAAG-RLSQIVVGKGGVNDLCQSIVAMVSRHA 2461 Query: 105 YGWD--GDRLTTIQNDRTRIQ--------TIYQPGSFTPLIRVETATGELAKTQRRSLAD 154 Y +D G+RL I + T Y L V+ G+ + + ++ + Sbjct: 2462 YSYDGNGNRLVQIAVRTSPSTQELGSPEFTEYGYDVLNRLTGVKAPDGQASLYRWDAVGN 2521 Query: 155 TLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSEESRR-WL--------ASCGLTVE 205 + P + L E+ D V +R WL A+ +++ Sbjct: 2522 RTGERRAPSLAVSGLGPDSYNTV--LAHEVTYDVVGIFNRVDWLRNLRDLKDATKHVSLG 2579 Query: 206 QMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDE 250 T + D R A+ G +YD Sbjct: 2580 YDLAGNITQKTVQASTRAFVWDVRNTLTAVYD-NGVEVGRYDYDA 2623 Score = 58.3 bits (139), Expect = 6e-07, Method: Composition-based stats. Identities = 42/313 (13%), Positives = 77/313 (24%), Gaps = 62/313 (19%) Query: 12 HYLYRYDRHGRLTEKTDLIPE-------------------------------------GV 34 + Y YD GR + + + + Sbjct: 2104 DFRYTYDDLGRRVREENALNQVTAWAYDAVGNKVCAKQPLGQPSLAHGAASGMSLAQLEA 2163 Query: 35 IRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWM 94 R+ Y+ + RLV T Y+YD VAK+ + Sbjct: 2164 NACGGTYVTRFGYEEEGRLVSVTDAANG----LYSYVYDAARNMVAKQDANENLTTYEYD 2219 Query: 95 SLSRKPQVTWYGWDGDRLTTIQND--------------RTRIQTIYQPGSFTPLIRVETA 140 + + + RLT+ Q D + + Sbjct: 2220 VRNLRSAEHQHLDAHSRLTSAQRDSVPLFESGATPTSNTGTLTWRHTYDGNRNEASRVDP 2279 Query: 141 TGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSEESRRWLASC 200 G+ + L D L + P + + + S+ + Sbjct: 2280 KGQRVEF-AHGLLDRLASRTYSQHATPREFPSVDSEVLTYDPNGNLTGESQSKQTTNGVR 2338 Query: 201 GLTVEQMQNQMDPVYTPARKI----HLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLN 256 V + +D + T R+ Y D G + ++ A YD G L + Sbjct: 2339 QEVVTSTFDALDRLKTRLREYDGKQVSYRYDALGSRTRVEDSD-AVATTYMYDALGRLTH 2397 Query: 257 EENPHQLQQLIRL 269 P + + R Sbjct: 2398 ATLPEGVVE-YRY 2409 Score = 58.3 bits (139), Expect = 6e-07, Method: Composition-based stats. Identities = 46/248 (18%), Positives = 73/248 (29%), Gaps = 33/248 (13%) Query: 17 YDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYLYDPLG 76 YD +G LT ++ + T + D+ RL R + + Y YD LG Sbjct: 2318 YDPNGNLTGESQSKQTTNGVRQEVVTSTF--DALDRLKTRLREYDGK---QVSYRYDALG 2372 Query: 77 RRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQPGSFTPLIR 136 R + +L RLT ++ Y P S L++ Sbjct: 2373 SRTRVEDSDAVATTYMYDALG-------------RLTHATLPEGVVEYRYWPDS---LLK 2416 Query: 137 VETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSEESRRW 196 T +++ + A L Q GG +V M+ R + R Sbjct: 2417 GVTWPNGISEGRCYDAAGRLSQIVVGKGGVNDLCQSIVAMVSRHAYSYDGNG-----NRL 2471 Query: 197 LASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLN 256 + T Q P +T Y D + + +G +D GN Sbjct: 2472 VQIAVRTSPSTQELGSPEFTE------YGYDVLNRLTGVKAPDGQ-ASLYRWDAVGNRTG 2524 Query: 257 EENPHQLQ 264 E L Sbjct: 2525 ERRAPSLA 2532 Score = 57.9 bits (138), Expect = 8e-07, Method: Composition-based stats. Identities = 57/287 (19%), Positives = 86/287 (29%), Gaps = 45/287 (15%) Query: 16 RYDRHGRLTEKTDLIPEGVIRT----------------DDERTHRYHYDSQHRLVHYTRT 59 YD +G+L KT + + + T R +D+ RL + Sbjct: 1419 EYDMYGQLRSKTLQVSDTSVITVQSTFDARGRLEVEQDGLGRHRTLQWDALDRLTQEDQW 1478 Query: 60 QYAEPLVESRYLYDPLG--RRVAKRV-WRRERDLTGWMSLSR---------KPQVTWYGW 107 + EP V Y G +R + V + R+ L L+R P T YG+ Sbjct: 1479 NFGEPGVSRTVQYYAGGQLKREEQGVDFVRDYYLDAAGRLARIVESGGGLAAPLETRYGY 1538 Query: 108 D--GDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRS-----LADTLQQSG 160 D G+R T I T Y ++V A G +Q S + L + Sbjct: 1539 DEAGNRTTVIDRRGVLTTTAYDFADRPVEVKVSVADGPRFISQGGSPDEVGRSYVLSTTR 1598 Query: 161 GEDGGSVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARK 220 +D G+ V+ L + V E S + Q RK Sbjct: 1599 YDDAGNKVWHADLSGFDRTYRLDSFYRVVEEHSPEVPGASDTAQPLRYIQESRYDLVGRK 1658 Query: 221 IHLY---------HCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEE 258 + D G + L G YD GN+ Sbjct: 1659 VREVDGSGHASTTAYDLLGRAVVLTDPLGR-VERRSYDGRGNVTEVR 1704 Score = 47.1 bits (110), Expect = 0.001, Method: Composition-based stats. Identities = 48/263 (18%), Positives = 70/263 (26%), Gaps = 39/263 (14%) Query: 16 RYDRHGRLTEKTDLIPEGVIRTDD------------ERTHRYHYDSQHRLVHYTRTQYAE 63 RYD GR + D D R R YD + + R Sbjct: 1651 RYDLVGRKVREVDGSGHASTTAYDLLGRAVVLTDPLGRVERRSYDGRGNVTEVRREAGGV 1710 Query: 64 PLVESRYLYDPLGRRVA-KRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRI 122 YD LGR ++ E + + + V W QN R + Sbjct: 1711 LQRTLSTTYDGLGRTLSISESAAAETGNVVYTTQTVHDDVAHVTW-------TQNARGLL 1763 Query: 123 QTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLES 182 Q + G L RV + D + S V ++ R+ Sbjct: 1764 QASHLDG----LGRVFKVVEDAPTGPLPRQPDDARIGPALALTSTVEYDAFSRVAARV-- 1817 Query: 183 EILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGAT 242 D + + + G V P+ K++ D G + V G Sbjct: 1818 ----DALGRRTETVHDALGRQVAV----HHPMGVSTSKVY----DGEGNLIQSVDGRG-I 1864 Query: 243 EWCAEYDEWGNLLNEENPHQLQQ 265 YD G NE L Q Sbjct: 1865 TRRFTYDALGRPRNEVLVESLSQ 1887 Score = 42.1 bits (97), Expect = 0.049, Method: Composition-based stats. Identities = 37/239 (15%), Positives = 77/239 (32%), Gaps = 21/239 (8%) Query: 18 DRHGRLTEKTDLIPEGVIRTDD--ERTHRYHYDSQHRLVHYTRTQYAEPLVESRYLYDPL 75 D G LT +R D ++ +D+ H+ +TQ A+ + +R+ YD Sbjct: 1915 DARGNLTTLYRDGLGREVRRIDALGYVTKFRFDALHK----RQTQDAKGYI-ARFSYDGA 1969 Query: 76 GRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQP-GSFTPL 134 GR + + + + Q Y T + ++ G T Sbjct: 1970 GRVLGQSDYASAGSSPTY------SQTWEYADAVREQTHLNRRGVPTVLLHDGLGRKTRS 2023 Query: 135 IRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSEESR 194 +R + A + + ++ + ++++ L + D ++ + Sbjct: 2024 VRGQGADVAEESWEYNASGHPIRFVDANGHAAERLYDGAGRLIEELLAAGSLDE-AKTTF 2082 Query: 195 RWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGN 253 ++ A+ LT + V+ Y D G + + A YD GN Sbjct: 2083 QYDAAGQLTQTKGPRVTGSVFD-----FRYTYDDLGRRVREENALNQVTAWA-YDAVGN 2135 Score = 40.9 bits (94), Expect = 0.093, Method: Composition-based stats. Identities = 43/271 (15%), Positives = 74/271 (27%), Gaps = 49/271 (18%) Query: 14 LYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYH-------------------YDSQHRLV 54 + YD GR+ ++D G T + T Y +D R Sbjct: 1963 RFSYDGAGRVLGQSDYASAGSSPTYSQ-TWEYADAVREQTHLNRRGVPTVLLHDGLGRKT 2021 Query: 55 HYTRTQYAEPLVESRYLYDPLGR-------------RVAKRVWRRERDLTGWMSLSRKPQ 101 R Q A+ + E + Y+ G R+ R +L SL Sbjct: 2022 RSVRGQGAD-VAEESWEYNASGHPIRFVDANGHAAERLYDGAGRLIEELLAAGSLDEAKT 2080 Query: 102 VTWYGWDGDRLTTIQNDRTRI---QTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQ 158 Y G +LT + R Y +R E A ++ ++ + + Sbjct: 2081 TFQYDAAG-QLTQTKGPRVTGSVFDFRYTYDDLGRRVREENALNQVTAWAYDAVGNKVCA 2139 Query: 159 SGGEDGGSVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPA 218 S+ L +LE+ + + ++ V A Sbjct: 2140 KQPLGQPSLAHGAASGMSLAQLEANACGGTYVTRFG----------YEEEGRLVSVTDAA 2189 Query: 219 RKIHLYHCDHRGLPLALVSTEGATEWCAEYD 249 ++ Y D +A EYD Sbjct: 2190 NGLYSYVYDAARNMVAKQDANENLT-TYEYD 2219 >UniRef50_C5SNJ4 YD repeat protein n=1 Tax=Asticcacaulis excentricus CB 48 RepID=C5SNJ4_9CAUL Length = 1421 Score = 149 bits (375), Expect = 3e-34, Method: Composition-based stats. Identities = 64/361 (17%), Positives = 114/361 (31%), Gaps = 49/361 (13%) Query: 4 DNRIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAE 63 + + Y YD +GR ++ + Y Y+ L + Sbjct: 853 ETNVQPLGTVSYEYDAYGRRSK---------LIYPGGLHVLYTYNPDGSLAGI-YEDGSA 902 Query: 64 PLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVT-------WYGWD-GDRLTTI 115 L YD GRR + + + +T + ++ +++ T Sbjct: 903 TLATM--DYDAHGRRAHLYRGNGQHTTYTFDIRANLSTLTNASVNSQGFTYNTANQIATR 960 Query: 116 QNDRTRIQTI--------YQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSV 167 + Q I Y + V TG + +D G G + Sbjct: 961 TQTNSLFQVIPTADKTLTYAINGLNQISNVN-GTGFSHDGRGNMTSDGAVNYGYTVGNML 1019 Query: 168 VFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMD--------------- 212 + + +L+ + + ++L + + + Sbjct: 1020 TSTSTGATLTYDAANRLLSITKAGVTTKFLYDGTDLIAEYDGSNNLLRRYVHGPGIDEPV 1079 Query: 213 --PVYTPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRLP 270 + + + DH+G A++++ G YDE+G + L R Sbjct: 1080 VWYEGSGTGTKYYFMSDHQGSIQAVLNSNGTVNSTYAYDEYG--VPYTTSGSLFSRFRYT 1137 Query: 271 GQQYDEESGLYYNRHRYYDPLQGRYITQDPIGLKGGWNFYQYPLN-PVQYIDSMGLASKY 329 GQ Y E GLYY + R Y P GR++ DPIG G N+Y Y N P+ D GL + Sbjct: 1138 GQAYLSEIGLYYYKARMYSPTLGRFLQTDPIGYDDGMNWYAYVHNDPMNGKDPSGLCEES 1197 Query: 330 G 330 Sbjct: 1198 T 1198 >UniRef50_A9FZA9 Rhs family protein n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=A9FZA9_SORC5 Length = 2407 Score = 148 bits (374), Expect = 3e-34, Method: Composition-based stats. Identities = 75/372 (20%), Positives = 121/372 (32%), Gaps = 67/372 (18%) Query: 11 AHYLYRYDRHGRLTEKTDLIPEGVIRTDD--ERTHRYHYDSQHRLVHYTRTQYAEPLVES 68 + Y YD G + E D + V + + +Y YD+ +RL+ T ++A L ++ Sbjct: 1741 QNLTYVYDPVGNIVEIGDSAQQTVFFNNAVVSPSAQYVYDAVYRLIEATGREHAGGLSDA 1800 Query: 69 --------------------------RYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQV 102 +Y+YD +G T W + + Sbjct: 1801 PRDQNDLPIQSLPHANDAQALRNYTEQYVYDAVGNLRRMVHQAGTGSWTRWYAYEQTAN- 1859 Query: 103 TWYGWDGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGE 162 +RLT+ D ++ + D ++ + + Sbjct: 1860 -------NRLTSTTGDPANGPFR----NYAHDAHGNMTSMPHITALTWDENDQVRSTDLD 1908 Query: 163 DGGSVVFPPVL-------VQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPV- 214 GG V + V + L E + E RR +S + Q + MD Sbjct: 1909 GGGDVYYDYDAAGQRVRKVWEHNGLVDERIYLGGYEVYRRRNSSGLVLERQTLHVMDGAR 1968 Query: 215 ---------------YTPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLL---N 256 +T + +H G V G EY +G Sbjct: 1969 RVAMVETKTVDTSGPFTVTPRARYQLDNHLGSASLEVDGAGLVIGYEEYHPFGTTAYWSA 2028 Query: 257 EENPHQLQQLIRLPGQQYDEESGLYYNRHRYYDPLQGRYITQDPIGLKGGWNFYQYP-LN 315 Q+ R G + DEE+GLYY+ RYY P GR+ + DP G G N Y+Y N Sbjct: 2029 ASGIEVSQRRYRYTGTEKDEETGLYYHGARYYAPWLGRWTSADPAGFVDGPNLYEYVRGN 2088 Query: 316 PVQYIDSMGLAS 327 P++ D G S Sbjct: 2089 PIRLRDPSGRES 2100 Score = 45.6 bits (106), Expect = 0.004, Method: Composition-based stats. Identities = 35/244 (14%), Positives = 62/244 (25%), Gaps = 20/244 (8%) Query: 17 YDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQH-RLVHYTRTQYAEPLV--ESRYLYD 73 YD G+ I + + Y YD RL T+ ++ V Y+YD Sbjct: 1698 YDAKGQRER---------IEYGNGTSTAYTYDPLTFRLSRLKTTRSSDSAVLQNLTYVYD 1748 Query: 74 PLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGD-RLTTIQNDRTRIQTIYQPGSFT 132 P+G V ++ +S Q Y +D RL P Sbjct: 1749 PVGNIVEIGDSAQQTVFFNNAVVSPSAQ---YVYDAVYRLIEATGREHAGGLSDAPRDQN 1805 Query: 133 PLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSEE 192 L A+ R + + G V + +R++ Sbjct: 1806 DLPIQSLPHANDAQALRNYTEQYVYDAVGNLRRMVHQAGTGSWTRWYAYEQTANNRLTST 1865 Query: 193 SRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWG 252 + + + D + +G + +YD G Sbjct: 1866 TGDPANGPFRNYAHDAHGNMTSMPHITALTWDENDQ----VRSTDLDGGGDVYYDYDAAG 1921 Query: 253 NLLN 256 + Sbjct: 1922 QRVR 1925 >UniRef50_B0ACW0 Putative uncharacterized protein n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0ACW0_9CLOT Length = 626 Score = 148 bits (373), Expect = 5e-34, Method: Composition-based stats. Identities = 70/355 (19%), Positives = 132/355 (37%), Gaps = 62/355 (17%) Query: 4 DNRIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAE 63 +N+ + Y Y YD+ G + K++++ + TD Y Y+ ++LV + + Sbjct: 226 NNKTNKTESYAYEYDKVGNMISKSNILSDTNNITD------YTYNDLNQLVSSETSNLST 279 Query: 64 PLVESR--YLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTR 121 S+ Y YD G + + +++T M+ ++ Y T +N++T Sbjct: 280 GKTTSKKTYSYDENGNNI--KEVDSIKNITKEMTYDVDNRLDTY-------TQTENNKTT 330 Query: 122 IQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLE 181 Q+ G R++ + G+ + ++ D+ E Sbjct: 331 TQSNLYNGDGQ---RIQKSEGDNSINYYYQ------------------NGSVLYTTDKDE 369 Query: 182 SEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGA 241 + S ++ G + M+ + + + ++Y+ D +G ++ Sbjct: 370 K--------KTSHNFVGLEGNIISTMRYDLTGL-----EYYVYNKDIKGSTTNIIDNNKN 416 Query: 242 TEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEESGLYYNRHRYYDPLQGRYITQDP- 300 + +Y ++G E I G YD+ + LYY RYY+P R+ITQD Sbjct: 417 AKISYKYSDFGET-EEFGGIDFYNEIAYTGGIYDQSTSLYYLNARYYNPEDARFITQDTY 475 Query: 301 ---IGLKGGWNFYQYP-LNPVQYIDSMGLASKYG-----HLNNGGYGARPNKPPT 346 I + Y Y NP+ YID G + G + GA P PP Sbjct: 476 RGEINEPSSLHLYAYCANNPINYIDPSGHSYIEGKKYLSKCYSKWIGAIPYDPPV 530 >UniRef50_Q2SKC0 Rhs family protein n=8 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SKC0_HAHCH Length = 3976 Score = 148 bits (372), Expect = 6e-34, Method: Composition-based stats. Identities = 72/343 (20%), Positives = 121/343 (35%), Gaps = 46/343 (13%) Query: 8 ARDAHYLYRYDRHGRLTEKTDLIPEGVIRTD------------------DERTHRYHYDS 49 A Y YD RLT +T + D + R Y YD+ Sbjct: 3325 ANGQTTAYVYDALNRLTRQTTADEADNVIADYRYTLHSTGRREQIEELHNGRVSTYTYDA 3384 Query: 50 QHRLVHYTRTQYAEPLVESRYLYDPLGRRVAKRV--WRRERDLTGWMSLSRKPQVTW-YG 106 +RL H + + Y +D +G R + L+++ VT+ Y Sbjct: 3385 LYRLTHDAISDPVNGDYSAEYRFDNVGNRTYSIIDGVHTAYSYDDNDRLTQQGGVTYAYD 3444 Query: 107 WDGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGS 166 +G+ LT ++ + Y + ++ T T D ++ G + Sbjct: 3445 ANGNTLTETEDGLVTARYTYSAKN-----KLLAVTKAGETTSFGYNPDGIRTWKAASGAT 3499 Query: 167 VVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHC 226 F + +R +++L + V+ ++ + Q + A + Y Sbjct: 3500 TDF----IVDQNRDYAQVLQEVVNGANQVSYVYGDDLLSQAR---------AGDVSYYVY 3546 Query: 227 DHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEESGLYYNRHR 286 D +G +L + G YD +G LL+ E G+QYD YY R R Sbjct: 3547 DGQGSVRSLTNQTGVQTDNYHYDAFGILLHSEG--DTPNSYLYTGEQYDASLDQYYLRAR 3604 Query: 287 YYDPLQGRYITQDP-IGLKG---GWNFYQYPL-NPVQYIDSMG 324 YYD QGR+ D +GL + Y Y +P+ Y+D G Sbjct: 3605 YYDQNQGRFTQMDTWMGLNSDPVTLHKYLYANADPISYVDPTG 3647 Score = 82.2 bits (201), Expect = 5e-14, Method: Composition-based stats. Identities = 44/236 (18%), Positives = 65/236 (27%), Gaps = 35/236 (14%) Query: 15 YRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYLYDP 74 Y YD+ G T T V T Y YD+ +RL Q E L Y YD Sbjct: 3266 YSYDKAGNKTSAT------VTYQGKTETTTYLYDTLNRLSKVIDPQGGETL----YAYDA 3315 Query: 75 LGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQPGSFTPL 134 +G R + + + +L+R + T T + D Y S Sbjct: 3316 VGNRESVTQANGQTTAYVYDALNRLTRQT---------TADEADNVIADYRYTLHSTGRR 3366 Query: 135 IRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSEESR 194 ++E T L D + +E D V R Sbjct: 3367 EQIEELHNGRVSTYTYDALYRLTHDAISDPVN-----------GDYSAEYRFDNVGN--R 3413 Query: 195 RWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDE 250 + G+ + D + + Y D G L +G Y Sbjct: 3414 TYSIIDGVHTAYSYDDNDRLTQQGGVTYAY--DANGNTLTET-EDGLVTARYTYSA 3466 Score = 74.5 bits (181), Expect = 8e-12, Method: Composition-based stats. Identities = 41/305 (13%), Positives = 92/305 (30%), Gaps = 46/305 (15%) Query: 4 DNRIARD----AHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRT 59 N++ +Y YD +G + +T ++ D+ T RY YD+++R++ Sbjct: 2867 GNKLTEVNALEQRTIYTYDDNGNVLSETRKRTVDGVKVDE--TTRYVYDARNRVIETQYA 2924 Query: 60 QYAEPLVE-----------------SRYLYDPLGRRVAKRVWRRERDLTGWM-------S 95 + E + Y YD GR +A + + Sbjct: 2925 DGSSTQTEYDLAGNQIVTIDMQGRRTDYEYDVYGRLLATTYPDGTSESKTYDVEGNVLTE 2984 Query: 96 LSRKPQVTWYGWD-GDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLAD 154 R +VT + +D +R+ + ++ ++ +VE+ T Sbjct: 2985 TDRLGRVTGFTYDKLNRVVRTELADGSFSSV----TYDAAGQVESETDSKGNVTHYEYDA 3040 Query: 155 TLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPV 214 +++ + + V + + + L T+ + + Sbjct: 3041 AGRRTAVINALNQRHSFVYDADGNLISETDANGHTTTYEYNILDQRVKTLFHDGSSLQET 3100 Query: 215 Y----------TPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQ 264 + A ++ Y D G +A+ YD+ GN L +++ Sbjct: 3101 FDALGRRLSSIDQAGRVTQYAYDKLGRLIAVTDALNNVT-SFTYDQAGNKLTQKDAEGRT 3159 Query: 265 QLIRL 269 Sbjct: 3160 TRWTY 3164 Score = 69.1 bits (167), Expect = 4e-10, Method: Composition-based stats. Identities = 43/269 (15%), Positives = 76/269 (28%), Gaps = 40/269 (14%) Query: 14 LYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYLYD 73 Y YD+ GRL TD + + YD TQ +R+ YD Sbjct: 3119 QYAYDKLGRLIAVTDAL---------NNVTSFTYDQAGN----KLTQKDAEGRTTRWTYD 3165 Query: 74 PLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQPGSFTP 133 +GR + + + + + + R T + T Y Sbjct: 3166 AMGRVLTRTLPMGQMESFSYDIAGRLLSHTDF--------------NGQTTAYTYDVNDQ 3211 Query: 134 LIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLV----QMLDRLESEILADRV 189 + R++ A GE+ ++ L + S + + + D+ Sbjct: 3212 VSRIDYADGEVETFTYNAIGARLTATNSLGTTSYQYDALNRLVEESQPNGAVLSYSYDKA 3271 Query: 190 SEESRRWLASCGLTVEQMQ-----NQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEW 244 ++ + G T N++ V P LY D G ++ G T Sbjct: 3272 GNKTSATVTYQGKTETTTYLYDTLNRLSKVIDPQGGETLYAYDAVGNRESVTQANGQTTA 3331 Query: 245 CAEYDEWGNLLNEENPHQLQQ---LIRLP 270 YD L + + R Sbjct: 3332 -YVYDALNRLTRQTTADEADNVIADYRYT 3359 Score = 63.3 bits (152), Expect = 2e-08, Method: Composition-based stats. Identities = 53/312 (16%), Positives = 89/312 (28%), Gaps = 59/312 (18%) Query: 12 HYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHR------------YHYDSQHRLVHYTRT 59 + Y YD HG +T+ + T DER ++ + Y+++ + T T Sbjct: 2753 TWSYAYDDHGNQLSETNPLGYVSSATFDERNNQLTQTDELGNTASFTYNTRGQ--ELTIT 2810 Query: 60 QYAEPLVESRYLY--------DPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDR 111 + + Y DPLG + R +L + Q T Y DG++ Sbjct: 2811 DASGDAFTNVYDSIGNLLSVTDPLGNVAENTLNRDGLVEKTKDALGNETQYT-YDKDGNK 2869 Query: 112 LTTIQNDRTRIQTIYQPG----SFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSV 167 LT + R Y S T V+ + + + ++ DG S Sbjct: 2870 LTEVNALEQRTIYTYDDNGNVLSETRKRTVDGVKVDETTRYVYDARNRVIETQYADGSST 2929 Query: 168 VFPPVLV------------------QMLDRLESEILADRVSE------------ESRRWL 197 L + RL + D SE E+ R Sbjct: 2930 QTEYDLAGNQIVTIDMQGRRTDYEYDVYGRLLATTYPDGTSESKTYDVEGNVLTETDRLG 2989 Query: 198 ASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNE 257 G T +++ + D G + ++G EYD G Sbjct: 2990 RVTGFTYDKLNRVVRTELADGS-FSSVTYDAAGQVESETDSKGNVT-HYEYDAAGRRTAV 3047 Query: 258 ENPHQLQQLIRL 269 N + Sbjct: 3048 INALNQRHSFVY 3059 Score = 56.0 bits (133), Expect = 3e-06, Method: Composition-based stats. Identities = 44/248 (17%), Positives = 73/248 (29%), Gaps = 39/248 (15%) Query: 4 DNRIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAE 63 ++R+ + Y YD +G +T+ D T RY Y ++++L+ T + Sbjct: 3430 NDRLTQQGGVTYAYDANGNTLTETE---------DGLVTARYTYSAKNKLLAVT-----K 3475 Query: 64 PLVESRYLYDPLGRRVAKRVWRRERDL---------TGWMSLSRKPQVTWYGWDGDRLTT 114 + + Y+P G R K D + Y + GD L + Sbjct: 3476 AGETTSFGYNPDGIRTWKAASGATTDFIVDQNRDYAQVLQEVVNGANQVSYVY-GDDLLS 3534 Query: 115 IQNDRTRIQTIYQ-PGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVL 173 +Y GS L TG L S G+ S ++ Sbjct: 3535 QARAGDVSYYVYDGQGSVRSLTN---QTGVQTDNYHYDAFGILLHSEGDTPNSYLYTGE- 3590 Query: 174 VQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPL 233 Q L+ L R+ QM M P + + P+ Sbjct: 3591 -QYDASLDQYYL-------RARYYDQNQGRFTQMDTWMGLNSDPVTLHKYLYANA--DPI 3640 Query: 234 ALVSTEGA 241 + V G Sbjct: 3641 SYVDPTGN 3648 Score = 47.1 bits (110), Expect = 0.002, Method: Composition-based stats. Identities = 42/290 (14%), Positives = 71/290 (24%), Gaps = 49/290 (16%) Query: 18 DRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAE-------------- 63 D +G T I + R+ DSQ R+V T +E Sbjct: 2606 DPNG----HTLTYTNDGIFHSSGKAVRFTRDSQGRIVSMTDPNGSELTYTYDFNGDLEVS 2661 Query: 64 ---PLVESRYLY----------DPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGD 110 ++ Y Y DPLGR + K ++ L + +G Sbjct: 2662 TDPMAAQTSYTYNRSHGLLDIIDPLGRTIVKNIYDDAGRLMAQEDSEGHRTEFDHDIEGR 2721 Query: 111 RLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFP 170 + + Y V + T + D Q + V Sbjct: 2722 QSVVTDRNGNTTFLYYDDRG-----NVTSKVDAEGHTWSYAYDDHGNQLSETNPLGYVSS 2776 Query: 171 PVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRG 230 + ++L + + + + VY + L D G Sbjct: 2777 ATFDERNNQLTQTDELGNTASFTYNTRGQELTITDASGDAFTNVYDSIGNL-LSVTDPLG 2835 Query: 231 LPLALV-----------STEGATEWCAEYDEWGNLLNEENPHQLQQLIRL 269 G YD+ GN L E N + + + Sbjct: 2836 NVAENTLNRDGLVEKTKDALGNET-QYTYDKDGNKLTEVNALEQRTIYTY 2884 >UniRef50_A6G340 Putative uncharacterized protein n=2 Tax=Plesiocystis pacifica SIR-1 RepID=A6G340_9DELT Length = 2523 Score = 148 bits (372), Expect = 7e-34, Method: Composition-based stats. Identities = 72/373 (19%), Positives = 116/373 (31%), Gaps = 65/373 (17%) Query: 9 RDAHYLYRYDRHGRLTEKTDLIPEGVI--RTDDERTHRYHYDSQHRLVHYTRTQYAEPLV 66 R Y YD G +T+ D + V T E + Y YD+ RL+ T ++A Sbjct: 1801 RLQSLHYHYDPAGNITDIRDTAQQTVFFQNTVVEAANSYTYDAVGRLIEATGREHASQGT 1860 Query: 67 -------------------------ESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQ 101 RY YD G + + + Sbjct: 1861 AQRTHAQLPVGPQPMTSDPSAMRRYTQRYTYDAAGNILKLQHIPSSGTGW--------TR 1912 Query: 102 VTWYGWDGDRLTTIQNDR---------TRIQTIYQPG------------SFTPLIRVETA 140 Y DG+RL + Y ++ PL +++ A Sbjct: 1913 HYAYATDGNRLLSTSAPGDLPNPGGGPYSHSYTYDAHGSMVTMPHLPAMTWNPLDQLQHA 1972 Query: 141 TGELAKTQ-----RRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSEESRR 195 T + + + + G ++ R+ ++ +R + Sbjct: 1973 TAGTQEVYFQYAGGSNRSRKFTEHAGGTTEERIYLGPFELYRKRINGQLDLERETLHVSD 2032 Query: 196 WLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLL 255 + + + PV +P +H G V+ GA EY +G Sbjct: 2033 GTGRICMVETKTADAGTPVPSPTPMWRFQLSNHLGSTATEVTETGAVISHEEYHPYGTSA 2092 Query: 256 NEENPHQLQ---QLIRLPGQQYDEESGLYYNRHRYYDPLQGRYITQDPIGLKGGWNFYQY 312 + + R G + DEE+GL Y+ RYY P GR+ DP GL GG + Y Y Sbjct: 2093 YRSVDSSIDVSARRYRHTGMERDEETGLGYHTARYYAPWLGRWTAADPSGLSGGIDRYCY 2152 Query: 313 -PLNPVQYIDSMG 324 NP + D G Sbjct: 2153 AAGNPARNTDQNG 2165 Score = 48.6 bits (114), Expect = 5e-04, Method: Composition-based stats. Identities = 47/245 (19%), Positives = 73/245 (29%), Gaps = 27/245 (11%) Query: 9 RDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVES 68 + Y YD G L + T L P G YD++ + + A P + Sbjct: 1720 DGSRTRYAYDEGGGLRQVT-LEPRGAT-PAQTVVGDMSYDAKGQRLQVVYGPAASPTSTT 1777 Query: 69 RYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQ- 127 Y YDP + +R R T S S + Q Y +D T D + +Q Sbjct: 1778 DYTYDP-------QTYRLTRLKTTRGSDSERLQSLHYHYDPAGNITDIRDTAQQTVFFQN 1830 Query: 128 -----PGSFTPLI--RVETATGELAKTQRRSLADTLQQSGGEDGGS----VVFPPVLVQM 176 S+T R+ ATG +Q + Q G + + Sbjct: 1831 TVVEAANSYTYDAVGRLIEATGREHASQGTAQRTHAQLPVGPQPMTSDPSAMRRYTQRYT 1890 Query: 177 LDRLESEILADRVSEESRRW-----LASCGLTVEQMQNQMD-PVYTPARKIHLYHCDHRG 230 D + + + W A+ G + D P H Y D G Sbjct: 1891 YDAAGNILKLQHIPSSGTGWTRHYAYATDGNRLLSTSAPGDLPNPGGGPYSHSYTYDAHG 1950 Query: 231 LPLAL 235 + + Sbjct: 1951 SMVTM 1955 Score = 45.2 bits (105), Expect = 0.005, Method: Composition-based stats. Identities = 43/257 (16%), Positives = 66/257 (25%), Gaps = 28/257 (10%) Query: 18 DRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYT-RTQYAEPLVES--RYLYDP 74 D GR E D RY YD L T + A P YD Sbjct: 1708 DALGRTIEAIS---------PDGSRTRYAYDEGGGLRQVTLEPRGATPAQTVVGDMSYDA 1758 Query: 75 LGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQPGSFTPL 134 G+R+ + V+ T + PQ + + Y P Sbjct: 1759 KGQRL-QVVYGPAASPTSTTDYTYDPQTYRLTRLKTTRGSDSERLQSLHYHYDPAGNITD 1817 Query: 135 IR--------VETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILA 186 IR + E A + L ++ G + S L + + Sbjct: 1818 IRDTAQQTVFFQNTVVEAANSYTYDAVGRLIEATGREHASQGTAQRTHAQLPVGPQPMTS 1877 Query: 187 DRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHL-YHCDHR-----GLPLALVSTEG 240 D + + ++ Q P H Y D P L + G Sbjct: 1878 DPSAMRRYTQRYTYDAAGNILKLQHIPSSGTGWTRHYAYATDGNRLLSTSAPGDLPNPGG 1937 Query: 241 ATEWC-AEYDEWGNLLN 256 YD G+++ Sbjct: 1938 GPYSHSYTYDAHGSMVT 1954 >UniRef50_D1PUV1 RHS family protein n=1 Tax=Prevotella bergensis DSM 17361 RepID=D1PUV1_9BACT Length = 284 Score = 147 bits (371), Expect = 7e-34, Method: Composition-based stats. Identities = 44/126 (34%), Positives = 62/126 (49%), Gaps = 6/126 (4%) Query: 217 PARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEEN------PHQLQQLIRLP 270 K + DH G P+ + +G W D G ++ E + ++ Sbjct: 30 QDGKAYSIVTDHLGTPMEAYNEQGEEVWYRRLDMNGKVIEERSMNYTSYKDYVKIPFLFQ 89 Query: 271 GQQYDEESGLYYNRHRYYDPLQGRYITQDPIGLKGGWNFYQYPLNPVQYIDSMGLASKYG 330 GQ YDEE L YNR RYYDP GRYI++DP+ L GG N Y+Y N + + D +GL+S Sbjct: 90 GQYYDEEVKLAYNRFRYYDPELGRYISEDPVRLLGGSNLYRYVENTILWCDPLGLSSAKL 149 Query: 331 HLNNGG 336 + GG Sbjct: 150 NKALGG 155 >UniRef50_Q0K1I3 Insecticidal toxin complex protein n=2 Tax=Proteobacteria RepID=Q0K1I3_RALEH Length = 2644 Score = 147 bits (371), Expect = 8e-34, Method: Composition-based stats. Identities = 85/451 (18%), Positives = 138/451 (30%), Gaps = 90/451 (19%) Query: 2 WPDNRIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDD--ERTHRYHYDSQHRLVHYTRT 59 WP + + Y YD G +T D + + + E ++ Y YD+ +RL+ T Sbjct: 1955 WPG---KQVQNLHYTYDPAGNITHIQDDAQQTIYFRNKRVEPSNDYVYDALYRLIQATGR 2011 Query: 60 QYAEPLVE--------------------------------SRYLYDPLGRRVAKRVWRRE 87 ++ L RY+YD +G + + + Sbjct: 2012 EHLGQLASGERKPPTAPDGSNAFHTGLDHPGNGNAMGTYIERYVYDAVGNFLQMQHRGND 2071 Query: 88 RDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETAT------ 141 GW + + DG+ ++ +T P TP Sbjct: 2072 PAHPGWTRAYDYLEASLIE-DGNGGALLKTRNRLTRTTLNPAGNTPQPETYLHDVHGNML 2130 Query: 142 -------GELAKTQRRSLADTLQQSGGEDGGSVVF----------------PPVLVQMLD 178 G L D L+Q+ GG+ + P + + + Sbjct: 2131 RMPHLGGGLLGPNMHWDYKDQLRQTDLGGGGAAWYVYDASGQRVRKVWEKAPGLTEERIY 2190 Query: 179 RLESEILADRVSEESRRWLASCGLTVEQMQN-------------QMDPVYTPARKIHLYH 225 EI V T+ M + + P + I Sbjct: 2191 LGGFEIFRKHVGPIDANTATLERETLHVMDDKQRIAVVETRTFDSAGGDHAPRQLIRYQF 2250 Query: 226 CDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQ--LIRLPGQQYDEESGLYYN 283 +H G + + EY +G+ + Q + R G++ DEESGLYY+ Sbjct: 2251 GNHLGSASLELDEQAQIISYEEYAPYGSSTYQAVRSQTETAKRYRYTGKEQDEESGLYYH 2310 Query: 284 RHRYYDPLQGRYITQDPIGLKGGWNFYQYP-LNPVQYIDSMGLASKYGHLN-------NG 335 RYY P GR+ DP G + G N YQY NP ++D G + K + G Sbjct: 2311 GARYYAPWLGRWTACDPAGEEEGPNLYQYCFGNPTGFVDPDGQSGKKLAIVMHNESKPAG 2370 Query: 336 GYGARPNKPPTPDPSKLPDIAKQLRLPYPID 366 RP +P P + K Sbjct: 2371 KELPRPKEPIKPQKPTIKAPGKNASDKEKAK 2401 >UniRef50_D1W397 RHS repeat-associated core domain protein n=3 Tax=Prevotella RepID=D1W397_9BACT Length = 709 Score = 147 bits (371), Expect = 8e-34, Method: Composition-based stats. Identities = 64/330 (19%), Positives = 110/330 (33%), Gaps = 28/330 (8%) Query: 12 HYLYRYDRHGRLTEK-TDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRY 70 + Y YD +G L T + + +Y +D ++RL+ E S Y Sbjct: 177 GHKYTYDANGNLVYINTSRVKHDGKEDEKATEQKYKWDEENRLLAAD-----ENGFVSNY 231 Query: 71 LYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWY-GWDGDRLTTIQNDRTRIQTIYQPG 129 YD G R K E + + L Q + Y Sbjct: 232 WYDADGERTVKTSGENEAIFVNSEFSGGNTGTARFSLYVSPYLVAGQGGK------YTKH 285 Query: 130 SFTPLIRVETATGELAKT--QRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILAD 187 + R+ + G+LA R + ++ G +Q + Sbjct: 286 IYVGSQRIVSKLGDLASYGADPRRIPYAGNEADGLTINYKDKYNQQLQSIKDNYKTFDLP 345 Query: 188 RVSEESRRWLASCGLTVE-----------QMQNQMDPVYTPARKIHLYHCDHRGLPLALV 236 +++ ++ G + + ++ + T R YH DH G + Sbjct: 346 YSGKDNDDYVNGKGFSSDDDTPETSQARAMVKTRAGEAGTNERLQFYYHPDHLGSSSYIT 405 Query: 237 STEGATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEESGLYYNRHRYYDPLQGRYI 296 + +G EY +G + EE + ++ DEE+GLYY RY DP ++ Sbjct: 406 NLDGEVSQHIEYVPFGEVFIEERNNTWNTPYLFNAKELDEETGLYYYGARYMDPKISMWL 465 Query: 297 TQDPIGLK-GGWNFYQYP-LNPVQYIDSMG 324 DP+ K Y Y NP+++ID G Sbjct: 466 GVDPLMEKYPSVTGYCYTMDNPIRFIDPDG 495 Score = 44.4 bits (103), Expect = 0.010, Method: Composition-based stats. Identities = 36/215 (16%), Positives = 67/215 (31%), Gaps = 11/215 (5%) Query: 12 HYLYRYDRHGRLTEKTDLIPEGVI-RTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRY 70 Y YD + + P + + +H Y YD +RL T T + Y Sbjct: 45 DNAYSYDAVSNVLGIQNNAPLPQSGKAGGQISHSYTYDPLYRLSSATGTYKGADNKTASY 104 Query: 71 L----YDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTR-IQTI 125 YD + R +K+ + ++ +L+ +T Y ++ D Q R I Sbjct: 105 TLAMGYDNMHRITSKKQHLTQSNVQFNGTLNAGYDLT-YTYNNDEGKKFQLASVRDINYR 163 Query: 126 YQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEIL 185 + TP G + S + G + E+ +L Sbjct: 164 TEE---TPTDSTNINNGHKYTYDANGNLVYINTSRVKHDGKEDEKATEQKYKWDEENRLL 220 Query: 186 -ADRVSEESRRWLASCGLTVEQMQNQMDPVYTPAR 219 AD S W + G + + + ++ + Sbjct: 221 AADENGFVSNYWYDADGERTVKTSGENEAIFVNSE 255 >UniRef50_A8YHM6 Genome sequencing data, contig C314 n=1 Tax=Microcystis aeruginosa PCC 7806 RepID=A8YHM6_MICAE Length = 900 Score = 147 bits (370), Expect = 1e-33, Method: Composition-based stats. Identities = 74/326 (22%), Positives = 109/326 (33%), Gaps = 43/326 (13%) Query: 12 HYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYL 71 Y Y YD GR T T L +Y YD+ +L Y Sbjct: 286 QYQYTYDNLGRRTTMTTLEG----------VFQYGYDAIGQLTSVITPTN----RTITYT 331 Query: 72 YDPLGRRVAKR---VWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQP 128 YD G R+ V + V Y DG+ ++ Q +T Y Sbjct: 332 YDAAGNRIGVTDSGVTTNYTTNNLNQYSNVGNGVYTYDTDGNLISKTQGGQTS---NYTY 388 Query: 129 GSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADR 188 + + L++V T +G D G ++ ++D L D Sbjct: 389 DAESRLVKVVTPSGT---------WDYEYDGLGNRTATIFNGQKTEYLVDPF---GLGDV 436 Query: 189 VSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWCAEY 248 V E + L + + Y D G + L + +G+ Y Sbjct: 437 VGEYNNNSLVAN-----YTHGIGLVSRVNGNNSNYYDADAIGSTVGLTANDGSYVNKYSY 491 Query: 249 DEWGNLLNEENPHQLQQLIRLPGQQ--YDEESGLYYNRHRYYDPLQGRYITQDPIGLKGG 306 +G + + GQ DE +GL + R R+YD GR+ + DPI L GG Sbjct: 492 LPFGE--DLTKIEAVANPFEYVGQWGVTDEGNGLDFMRARFYDSSLGRFTSVDPINLAGG 549 Query: 307 W-NFYQYPLN-PVQYIDSMGLASKYG 330 NFY+Y N P ID GL+ G Sbjct: 550 DANFYRYVFNSPNTLIDPSGLSCSRG 575 Score = 58.3 bits (139), Expect = 6e-07, Method: Composition-based stats. Identities = 42/254 (16%), Positives = 78/254 (30%), Gaps = 38/254 (14%) Query: 8 ARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVE 67 R ++ Y Y+ G LT+K + + Y YD++ L + Sbjct: 130 RRGSNISYTYNTSGLLTKKQ---------YGNSSSVNYSYDTRGNLTSVV-----DGTGT 175 Query: 68 SRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQ 127 YD R+ K + + + Y DG R + +D T Y Sbjct: 176 MTMQYDTA-NRLTKITY-----------PNGRSLSYTYNADGQRTKLVSSDG--YTTNYT 221 Query: 128 PGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILAD 187 + L + TG+ T A L + +G + L L +L + + Sbjct: 222 YDTVGRLKSLTNGTGQNIITYDYDSAGRLIKETNGNGTYTTYEYDLQDQLTKLVNYKANN 281 Query: 188 RVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWCAE 247 V+ + + + G + + Y D G ++++ T Sbjct: 282 TVNSQYQYTYDNLGRRTTMTTLEG---------VFQYGYDAIGQLTSVITPTNRTI-TYT 331 Query: 248 YDEWGNLLNEENPH 261 YD GN + + Sbjct: 332 YDAAGNRIGVTDSG 345 Score = 54.4 bits (129), Expect = 9e-06, Method: Composition-based stats. Identities = 44/279 (15%), Positives = 78/279 (27%), Gaps = 59/279 (21%) Query: 15 YRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQ-HRLVHYTRTQYAEPLVESRYLYD 73 Y YD LT++T+L+ + + YD+ ++L +T + Y YD Sbjct: 52 YSYDSKDNLTQQTNLL---------GQKTNFTYDATFNQLTSFTDPKGNG----VGYSYD 98 Query: 74 PLGRRVAKRVWRRERDLTGWMSLS-------RKPQVTWYGWDGDRLTTIQNDRTRIQTIY 126 +L R+ Y ++ L T + Y Sbjct: 99 TKANLNKITYSDGSTQQFTVDALGNITSYINRRGSNISYTYNTSGLLTKKQYGNSSSVNY 158 Query: 127 QPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILA 186 + L V TG + T + A+ L + +G S+ + Sbjct: 159 SYDTRGNLTSVVDGTGTM--TMQYDTANRLTKITYPNGRSLSYTY--------------- 201 Query: 187 DRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWCA 246 Q + + Y D G +L + G Sbjct: 202 -------------------NADGQRTKLVSSDGYTTNYTYDTVGRLKSLTNGTGQNIITY 242 Query: 247 EYDEWGNLLNEENPHQLQQLIRLPGQQYDEESGLYYNRH 285 +YD G L+ E N + Q D+ + L + Sbjct: 243 DYDSAGRLIKETNGNGTYTTYEYDLQ--DQLTKLVNYKA 279 >UniRef50_A7BNN3 Putative uncharacterized protein n=1 Tax=Beggiatoa sp. SS RepID=A7BNN3_9GAMM Length = 212 Score = 147 bits (370), Expect = 1e-33, Method: Composition-based stats. Identities = 39/113 (34%), Positives = 58/113 (51%), Gaps = 6/113 (5%) Query: 217 PARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQYDE 276 + Y DH G P L+ ++G W A Y+ +G + N ++ +R GQ +D Sbjct: 11 TNGSYYWYQTDHLGTPQKLIDSQGNVVWAAVYEAFGKARVDVNL--VENHLRFAGQYFDS 68 Query: 277 ESGLYYNRHRYYDPLQGRYITQDPIGLKGGWNFYQYP-LNPVQYIDSMGLASK 328 E+ L+YN +RYY+P GRY+ DPI N Y Y NP+ Y+D GL + Sbjct: 69 ETRLHYNYYRYYEPTIGRYLRVDPI---PSVNQYAYVSGNPLSYVDPFGLEKE 118 >UniRef50_A1TSG3 RHS protein n=1 Tax=Acidovorax citrulli AAC00-1 RepID=A1TSG3_ACIAC Length = 384 Score = 146 bits (369), Expect = 1e-33, Method: Composition-based stats. Identities = 55/200 (27%), Positives = 81/200 (40%), Gaps = 35/200 (17%) Query: 163 DGGSVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQ-----------NQM 211 D + V + D ++ + RWLA+ G Q Sbjct: 56 DPATGKVRSVPLTNGDASDAHHAVAGPVGATARWLAALGARETSAQGAKPEPPDREPPPA 115 Query: 212 DPVYTPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEE------------- 258 + P+ +I+ +H GLP + +G W A+Y WG+ + EE Sbjct: 116 NDSSQPSARIYYFHLQPNGLPEEMSDRDGHLAWRAQYRVWGSAVAEEWQAFDGVGRPVEA 175 Query: 259 -----------NPHQLQQLIRLPGQQYDEESGLYYNRHRYYDPLQGRYITQDPIGLKGGW 307 + + Q +R+ GQ D E+GL+YN RYY P G + T DPIGL GG Sbjct: 176 PRHETGQRPDNSAAPMPQNLRMQGQYLDRETGLHYNTFRYYGPDVGAFTTPDPIGLAGGV 235 Query: 308 NFYQYPLNPVQYIDSMGLAS 327 N +QY NPV +ID +G Sbjct: 236 NLHQYAPNPVSWIDPLGWNP 255 >UniRef50_A7B690 Putative uncharacterized protein n=3 Tax=Clostridiales RepID=A7B690_RUMGN Length = 2341 Score = 146 bits (369), Expect = 1e-33, Method: Composition-based stats. Identities = 71/327 (21%), Positives = 110/327 (33%), Gaps = 37/327 (11%) Query: 15 YRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYLYDP 74 Y YD G + + +G R RY+YD+ ++LV R + Y YD Sbjct: 1865 YTYDACGNVETMVERSADGSERKI-----RYYYDALNQLV---REDNQKQNQTICYTYDV 1916 Query: 75 LGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQPGSFTPL 134 G V + +R + P +T W D Y + T Sbjct: 1917 GGNMVRRDEYR----------YTENPMITEAPWKSDTFDYQTGGWRDQLRFYNGQAITYD 1966 Query: 135 IRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSEESR 194 + + L G + + + + + D + S Sbjct: 1967 AMGNPLQYLEMQMEWEK-GHQLNHITGAGLDMYCMYNDSGKRIRKTVNGVTTDFYLDGSA 2025 Query: 195 RWL--ASCGLTVEQMQNQMDPVYTPA--RKIHLYHCDHRGLPLALVSTEGATEWCAEYDE 250 + +S G ++ + V+ +++ Y + G L ++ + G EY+ Sbjct: 2026 ILMQTSSDGSRIDFFYDDKGNVFAMKYQNEMYFYRKNLFGDILGILDSHGTELVKYEYNS 2085 Query: 251 WGNLLN----EENPHQLQQLIRLPGQQYDEESGLYYNRHRYYDPLQGRYITQD------- 299 WG LLN N + R G YDEE G+YY RYYDP GR++ D Sbjct: 2086 WGKLLNLTDYSSNGLGRRNPFRFKGYYYDEELGMYYLNSRYYDPETGRFVNADDVEVLKT 2145 Query: 300 -PIGLKGGWNFYQYP-LNPVQYIDSMG 324 P L N Y Y NPV D G Sbjct: 2146 TPTALTD-KNLYSYCDNNPVGRKDGTG 2171 Score = 48.6 bits (114), Expect = 4e-04, Method: Composition-based stats. Identities = 40/228 (17%), Positives = 65/228 (28%), Gaps = 23/228 (10%) Query: 23 LTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYLYDPLGRRVAKR 82 +T +D I T Y YD ++RL+ + Y+YD Sbjct: 1562 MTYTSDYKQPKTITDSRGNTVHYEYDDKNRLLTKLTDAKGN---ATSYVYDA-------- 1610 Query: 83 VWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATG 142 ++ + K Y ++ +++T+I ++ Y P F L V Sbjct: 1611 --DTDKMTEVARMVDGKEVKVSYTYENEKVTSIGHNGFTYDYAYDP--FGNLESVSIGGR 1666 Query: 143 ELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGL 202 EL +T RS + G +V + L R + SCG Sbjct: 1667 ELERTTLRSRNGLADRITYATGEAVRNEYNPEEQLAAQYLITADGREEKLFENTYDSCGK 1726 Query: 203 TVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDE 250 T Y D G + + YDE Sbjct: 1727 IARHKDLCSGVTST-------YQYDLIGRMVG-TDRSDGMKLRKVYDE 1766 Score = 47.1 bits (110), Expect = 0.002, Method: Composition-based stats. Identities = 47/330 (14%), Positives = 81/330 (24%), Gaps = 75/330 (22%) Query: 9 RDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQ-HRLVHYTR--------- 58 R Y YD RL K + Y YD+ ++ R Sbjct: 1578 RGNTVHYEYDDKNRLLTK--------LTDAKGNATSYVYDADTDKMTEVARMVDGKEVKV 1629 Query: 59 ---------TQYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDG 109 T Y YDP G + + RE + T S + Y G Sbjct: 1630 SYTYENEKVTSIGHNGFTYDYAYDPFGNLESVSIGGRELERTTLRSRNGLADRITYA-TG 1688 Query: 110 DRLTTIQNDRTRIQTIY-----------QPGSFTPLIRVETATGELAKTQRRSLADTLQQ 158 + + N ++ Y ++ ++ + D + + Sbjct: 1689 EAVRNEYNPEEQLAAQYLITADGREEKLFENTYDSCGKIARHKDLCSGVTSTYQYDLIGR 1748 Query: 159 SGGEDGGSVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPA 218 G D + + +R++ +L ++ A Sbjct: 1749 MVGTDRSDGMKLRKVYDEKNRVKGYTYQKDRVGHEVEFLYGDVEKQQKPGLGYGIEINGA 1808 Query: 219 RKIHLYHCDHRGLPLALVS------------------------------TEGATEWCAEY 248 +KI Y D G + + EG Y Sbjct: 1809 QKI-AYEYDALGRVIRTHNHFSDTNTSTQEYTYVSGKEEGVTTNLVASVREGNRAESYTY 1867 Query: 249 DEWGNLLN--EENPHQLQQLIRLPGQQYDE 276 D GN+ E + ++ IR YD Sbjct: 1868 DACGNVETMVERSADGSERKIRY---YYDA 1894 Score = 44.8 bits (104), Expect = 0.007, Method: Composition-based stats. Identities = 23/125 (18%), Positives = 36/125 (28%), Gaps = 18/125 (14%) Query: 8 ARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVE 67 + Y YD G LT T D ++ YD H+L+ T Sbjct: 696 TKGREIRYGYDAQGNLTSIT---------YPDGSKSQFTYDGSHKLLSVTNPDG----YR 742 Query: 68 SRYLYDPLGR--RVAKRVWRRERDLTGW---MSLSRKPQVTWYGWDGDRLTTIQNDRTRI 122 Y Y R RV+K +++ G +S + D D + Sbjct: 743 VNYEYTNDFRVPRVSKVSETGQKNAPGQELKISYENGNTTIFEEPGLDGQMEHPGDNKKT 802 Query: 123 QTIYQ 127 + Sbjct: 803 TWHFD 807 >UniRef50_B7H4M5 Uncharacterized protein ybfO n=3 Tax=Acinetobacter baumannii RepID=B7H4M5_ACIB3 Length = 229 Score = 146 bits (368), Expect = 2e-33, Method: Composition-based stats. Identities = 43/103 (41%), Positives = 56/103 (54%), Gaps = 7/103 (6%) Query: 235 LVSTEGATEWCAEYDEWGNLLNE-------ENPHQLQQLIRLPGQQYDEESGLYYNRHRY 287 + G W A+Y WG E EN + IR GQ +D E+GL+YNR+ Y Sbjct: 1 MTDHTGVVIWKAQYKAWGECKVEQAKSDFFENSEIISNNIRFQGQYFDGETGLHYNRYCY 60 Query: 288 YDPLQGRYITQDPIGLKGGWNFYQYPLNPVQYIDSMGLASKYG 330 Y P GR+I++DPIGL GG N Y Y NPV ++D +GLA Sbjct: 61 YSPYVGRFISKDPIGLLGGSNIYAYAPNPVGWVDQLGLAKTPT 103 >UniRef50_C5ALD9 Rhs family protein n=1 Tax=Burkholderia glumae BGR1 RepID=C5ALD9_BURGB Length = 1136 Score = 146 bits (368), Expect = 2e-33, Method: Composition-based stats. Identities = 63/320 (19%), Positives = 106/320 (33%), Gaps = 44/320 (13%) Query: 15 YRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESR----- 69 Y YDR G L + P + +D L + P+ Sbjct: 805 YDYDRRGCLVRRVSGQPG---------IEYFTWDGAGNLRDMPGGRRLTPVRADHRIREG 855 Query: 70 --YLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGD-RLTTIQNDRTRIQTIY 126 Y YD + + WD + LT + + Y Sbjct: 856 HGYRYD-------------HDAWGRLVRRGGRGHPLSLSWDDEGHLTMARCQGCTVHYRY 902 Query: 127 QPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILA 186 R+E + + + + G +V ++ L L Sbjct: 903 DALG----RRIEKRVERDVRRRAHAPLADVVTRYLWQGERLVQERCGNRLRTYLYLPELD 958 Query: 187 DRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWCA 246 + + ++Q ++ + A +++ YH D G LAL + A W A Sbjct: 959 GTIG-------FAPLARLDQTLDENGEIDAAATQLYHYHTDGIGTALALSDSGSAMVWRA 1011 Query: 247 EYDEWGNLLN--EENPHQLQQLIRLPGQQYDEESGLYYNRHRYYDPLQGRYITQDPIGLK 304 E WG L ++Q +R GQ DEE+ L++N R YDP GRY++ D Sbjct: 1012 ESRAWGEPLPPLALGHEAVEQPLRFAGQYADEETSLHHNGRRIYDPGSGRYLSPDRTA-P 1070 Query: 305 GGWNFYQYPLNPVQYIDSMG 324 G + Y+Y NP+ + + +G Sbjct: 1071 DGLSPYRYAPNPLTWCNPLG 1090 Score = 81.8 bits (200), Expect = 5e-14, Method: Composition-based stats. Identities = 46/234 (19%), Positives = 70/234 (29%), Gaps = 31/234 (13%) Query: 3 PDNRIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYA 62 D+RI Y Y +D V R +D + L Sbjct: 848 ADHRIREGHGYRYDHDAW----------GRLVRRGGRGHPLSLSWDDEGHLTMARCQ--- 894 Query: 63 EPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRI 122 Y YD LGRR+ KRV R R VT Y W G+RL + Sbjct: 895 --GCTVHYRYDALGRRIEKRVERDVRRRAHAPLADV---VTRYLWQGERLVQERCGNRLR 949 Query: 123 QTIYQPG-----SFTPLIRVETATGELAKTQRRSLADTLQQSGG--------EDGGSVVF 169 +Y P F PL R++ E + + + G + G ++V+ Sbjct: 950 TYLYLPELDGTIGFAPLARLDQTLDENGEIDAAATQLYHYHTDGIGTALALSDSGSAMVW 1009 Query: 170 PPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHL 223 + L L E+ R+ + + +Y P +L Sbjct: 1010 RAESRAWGEPLPPLALGHEAVEQPLRFAGQYADEETSLHHNGRRIYDPGSGRYL 1063 Score = 51.7 bits (122), Expect = 6e-05, Method: Composition-based stats. Identities = 52/291 (17%), Positives = 85/291 (29%), Gaps = 53/291 (18%) Query: 9 RDAHYLYRYDRHGRLTEKTDLIP------------EGVIRTDDERTHRYHYDSQHRLVHY 56 A Y YD G L TD + IR D R R+ +++ + V + Sbjct: 460 DGATTTYEYDADGNLVGVTDALGAVTRIERDLLGRAVAIRRPDGRVERHVWNAASQRVSF 519 Query: 57 T------------------RTQYAEPLVESRYLYDPLGRRVA--------KRVWRRERDL 90 T RT E R YD GR + +R+ RD Sbjct: 520 TSANGTSRHWYRDRRGKVVRTVDEEGHAVLR-RYDAHGRLLRVESANGGVRRLAWGARDC 578 Query: 91 TGWMSLSRKPQVTWYGWDGD-RLTTIQNDRTRIQTIYQPGSFTPL-IRVETATGELAKTQ 148 + Y DG T R + + L R + + Sbjct: 579 LSITDADGVSREFDYTEDGWIAGITWTAGTQRWCETFAYDAIGRLIARESRHARHIYRYD 638 Query: 149 RRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADR--VSEESRRWLASCGLTVEQ 206 R + + + + G + V +LA+R E + A+ L + Sbjct: 639 ARGALEAVARVPTDAGVRLGVEGDEVGFERDAAGRVLAERGAAGELHHSYDAAGRLIATR 698 Query: 207 MQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNE 257 + P +++ H + G +ALV +G YD G + Sbjct: 699 LP--------PGQELR--HRRYAGGAIALVELDGRELARFWYDAAGRPIAR 739 Score = 48.3 bits (113), Expect = 7e-04, Method: Composition-based stats. Identities = 54/278 (19%), Positives = 75/278 (26%), Gaps = 33/278 (11%) Query: 14 LYRYDRHGRLTEKTDLIPEGVIR------------TDDERTHRYHYDSQHRLVHYTRTQY 61 Y Y HG L + E V R T T Y + T Sbjct: 230 RYDYGSHGELIAVRNRAGEQVRRFAYRDGQLVEVATSLGMTTCYRWRGAGAAARVTERAT 289 Query: 62 AEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTR 121 +E E R++YD RRV V W R + +DG R D Sbjct: 290 SEGARE-RFVYDAQRRRV--EVTDVFGHTAFWQYDERGDVTSCVDFDGRRYAFDYADVNA 346 Query: 122 IQTIYQPGSFT---------PLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFP-- 170 T++ PG+ T ++R G + TQ + DG + ++ Sbjct: 347 PGTLHLPGNRTVRLEYDAQGRVVREIDPLGGVRSTQYAFSTNEPIAVTMSDGRTWMWGRN 406 Query: 171 ----PVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPV--YTPARKIHLY 224 PV Q + D R A T P Y Sbjct: 407 DCLQPVHYQTPSGALERFVYDADGLLERTIDALGVETRTTCNRWGQPTCCIRSDGATTTY 466 Query: 225 HCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQ 262 D G + + GA E D G + P Sbjct: 467 EYDADGNLVGVTDALGAVT-RIERDLLGRAVAIRRPDG 503 Score = 47.5 bits (111), Expect = 0.001, Method: Composition-based stats. Identities = 43/272 (15%), Positives = 81/272 (29%), Gaps = 37/272 (13%) Query: 15 YRYDRHGRLTEKTDLIPE------------GVIRTDDERTHRYHYDSQHRLVHYTRTQYA 62 ++YD G +T D G + RT R YD+Q R+V Sbjct: 318 WQYDERGDVTSCVDFDGRRYAFDYADVNAPGTLHLPGNRTVRLEYDAQGRVVREIDPLGG 377 Query: 63 EPLVESRYLYDP-------LGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTI 115 + + + GR +W R L + + + +D D L Sbjct: 378 VRSTQYAFSTNEPIAVTMSDGR---TWMWGRNDCLQPVHYQTPSGALERFVYDADGLLER 434 Query: 116 QNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQ 175 D ++T + + G + + + + + + + +L + Sbjct: 435 TIDALGVETRTTCNRWGQPTCCIRSDGATTTYEYDADGNLVGVTDALGAVTRIERDLLGR 494 Query: 176 MLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLAL 235 + + +R W A+ ++ H Y D RG + Sbjct: 495 AVAIRRPDGRVER-----HVWNAA--------SQRVSFTSANGTSRHWY-RDRRGKVVRT 540 Query: 236 VSTEGATEWCAEYDEWGNLLNEENPHQLQQLI 267 V EG YD G LL E+ + + + Sbjct: 541 VDEEGHAVLR-RYDAHGRLLRVESANGGVRRL 571 >UniRef50_B5MRU6 Rhs-family protein n=9 Tax=Gammaproteobacteria RepID=B5MRU6_SALET Length = 216 Score = 146 bits (368), Expect = 2e-33, Method: Composition-based stats. Identities = 44/104 (42%), Positives = 63/104 (60%) Query: 235 LVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEESGLYYNRHRYYDPLQGR 294 + G W A Y WGNL +E+ +QQ +R GQ D E+GL+YN +R+YDP G+ Sbjct: 1 MTDGGGNIVWEAGYQVWGNLTHEKETRPVQQNLRFQGQYLDRETGLHYNLYRFYDPDIGK 60 Query: 295 YITQDPIGLKGGWNFYQYPLNPVQYIDSMGLASKYGHLNNGGYG 338 +I+ DPI ++GG N YQY NP+++ID +GL + G G Y Sbjct: 61 FISGDPISIRGGINLYQYAPNPIKWIDPLGLYNGEGQRELGKYH 104 >UniRef50_A6DLJ6 Putative uncharacterized protein n=1 Tax=Lentisphaera araneosa HTCC2155 RepID=A6DLJ6_9BACT Length = 2320 Score = 146 bits (367), Expect = 2e-33, Method: Composition-based stats. Identities = 69/341 (20%), Positives = 117/341 (34%), Gaps = 40/341 (11%) Query: 10 DAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESR 69 + YD LT + P + T YD+ R++ +R+ Y Sbjct: 1649 YSSTNMTYDGQANLTSQHLATPT------ENNTRTLQYDALERIIADSRSNYNHNW---- 1698 Query: 70 YLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQPG 129 YD G + S + Q G+DG + + + +T Y G Sbjct: 1699 -TYDANGNWTS----TNHNGAHENRSANNANQYNHLGYDGHQPGSSDSAKTNGNITYD-G 1752 Query: 130 SFTPLIR-----VETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEI 184 + + +E + + + T D L + + S Q Sbjct: 1753 KYNYVYDWNDRLIEVRSQDNSTTIANYTYDALNRRISKTTASHTIEYHYFQSE------- 1805 Query: 185 LADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEW 244 L + S L + G ++++ + +++H Y D +A+ G Sbjct: 1806 LLEEYKNGSLERLHTYGARMDEILTT--EIINQDQELH-YLRDSSNSVVAITDETGNLLE 1862 Query: 245 CAEYDEWG------NLLNEENPHQLQQLIRLPGQQYDEESGLYYNRHRYYDPLQGRYITQ 298 Y +G E G++YD ESGL++ R+R Y GR++ Sbjct: 1863 SYSYTSFGIRTIYNQTGQEIANSAYGITAGYTGREYDSESGLWHYRNRMYSAEIGRFMQV 1922 Query: 299 DPIGLKGGWNFYQYP-LNPVQYIDSMGLASKYGHLNNGGYG 338 DP G G N Y Y NP+ +ID GL + +LN+ G G Sbjct: 1923 DPAGFVDGLNLYAYVKNNPINFIDPWGLQAL--NLNSRGEG 1961 Score = 63.3 bits (152), Expect = 2e-08, Method: Composition-based stats. Identities = 40/266 (15%), Positives = 73/266 (27%), Gaps = 25/266 (9%) Query: 12 HYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYL 71 Y Y+ G T D + + YD RL+ Y Sbjct: 735 EVKYEYNARGLKTAAIDK---------NGNRTEFKYDGAERLIEKLLP----SQTRLIYQ 781 Query: 72 YDPLGRRVAKRVWRRER-DLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQPGS 130 YD G +++ + R+ + S Q T Y +D D T YQ Sbjct: 782 YDSNGNLLSETKYYRDTMEAQSTSSQKFFTQETTYTYDADNRKISMTTHGDKTTSYQYND 841 Query: 131 FTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVS 190 L + +L + Q+ + + RL I + Sbjct: 842 GINLTDIILPDDTRTHFDYDALNRKVAQTLNYGASDQRMTTYVYDAIGRLAQTIDPLGLV 901 Query: 191 EESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEG-------ATE 243 +E+ + A+ +++ NQ P + ++ G A Sbjct: 902 QENV-YDANSNKIQQRLYNQSSPTNAIVTNFTYNEKNQL---ISKTDPNGTFYNDDEAFT 957 Query: 244 WCAEYDEWGNLLNEENPHQLQQLIRL 269 Y+ G +L++ + Q Sbjct: 958 EYYTYNSRGKMLSKIDTLDYVQKFNY 983 Score = 51.0 bits (120), Expect = 1e-04, Method: Composition-based stats. Identities = 33/230 (14%), Positives = 66/230 (28%), Gaps = 28/230 (12%) Query: 15 YRYDRHGRLTEKTDLIPEGVIRTDDER-----------THRYHYDSQHRLVHYTRTQYAE 63 + YD G+L +TD T + R T Y YD++ L T Sbjct: 1333 FEYDAKGQLITQTDAEGITTTFTYNNRGLTTSQTLGQFTRYYEYDARGNLTKETDYNG-- 1390 Query: 64 PLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQN----DR 119 + Y YD R + + K +Y +G+ L + + Sbjct: 1391 --TVTMYAYD--------DRSRLQFTYEAVGTAQYKFTKNFYDDNGNILAHTSDYQGSNS 1440 Query: 120 TRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDR 179 + + + S I+ +L + + + DG +V+ + Sbjct: 1441 STYRYKFAYDSLNRRIKEYDGNNKLKQFTYNNRTGLIDNIRKRDGSYIVYNYDAMARQKE 1500 Query: 180 LESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHR 229 +++ VS + + + + Y I+ D Sbjct: 1501 VKAGPSLTNVS-LKQSFTYDNFSRMTTAKEHDQNTYDQVEMIYNIFDDLV 1549 Score = 47.5 bits (111), Expect = 0.001, Method: Composition-based stats. Identities = 42/253 (16%), Positives = 63/253 (24%), Gaps = 27/253 (10%) Query: 10 DAHYLYRYDRHGRLTEKT------------DLIPEGVIRTDDERTHRYHYDSQHRLVHYT 57 Y YD R T D I I D+ + YD+ +R V T Sbjct: 811 TQETTYTYDADNRKISMTTHGDKTTSYQYNDGINLTDIILPDDTRTHFDYDALNRKVAQT 870 Query: 58 RTQYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQN 117 A + Y+YD +GR + + S K Q RL + Sbjct: 871 LNYGASDQRMTTYVYDAIGRLAQTIDPLGLVQENVYDANSNKIQQ--------RLYNQSS 922 Query: 118 DRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQML 177 I T + LI G S G+ + VQ Sbjct: 923 PTNAIVTNFTYNEKNQLISKTDPNGTFYNDDEAFTEYYTYNSRGKMLSK-IDTLDYVQKF 981 Query: 178 DRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVS 237 + L V E++ + +T + D G +A Sbjct: 982 NYDSHGNLTSAVDPLGNLTKFQYNSRHERVSSINALSHTE-----HFDFDPNGNLIAYTD 1036 Query: 238 TEGATEWCAEYDE 250 Y+ Sbjct: 1037 QNKHLI-YYTYNA 1048 Score = 45.6 bits (106), Expect = 0.004, Method: Composition-based stats. Identities = 28/209 (13%), Positives = 58/209 (27%), Gaps = 20/209 (9%) Query: 15 YRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYLYDP 74 Y YD G LT++TD + Y YD + RL ++ YD Sbjct: 1374 YEYDARGNLTKETDY---------NGTVTMYAYDDRSRLQFTYEAVGTAQYKFTKNFYDD 1424 Query: 75 LGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDG-DRLTTIQNDRTRIQTIYQPGSFTP 133 G +A + + + + +D +R + +++ Sbjct: 1425 NGNILAHT--------SDYQGSNSSTYRYKFAYDSLNRRIKEYDGNNKLKQFTYNNRTGL 1476 Query: 134 LIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSEES 193 + + G ++A + G +V D A + + Sbjct: 1477 IDNIRKRDGSYIVYNYDAMARQKEVKAGPSLTNVSLKQSFTY--DNFSRMTTAKEHDQNT 1534 Query: 194 RRWLASCGLTVEQMQNQMDPVYTPARKIH 222 + + + + DP I+ Sbjct: 1535 YDQVEMIYNIFDDLVMETDPANRTTMAIY 1563 Score = 45.2 bits (105), Expect = 0.006, Method: Composition-based stats. Identities = 38/267 (14%), Positives = 81/267 (30%), Gaps = 40/267 (14%) Query: 15 YRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYLYDP 74 Y Y+ G++ K D + + +++YDS L DP Sbjct: 960 YTYNSRGKMLSKIDTL---------DYVQKFNYDSHGNLTSAV---------------DP 995 Query: 75 LGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQPGSF-TP 133 LG + K + + ++ + + +G+ + ++ I Y + T Sbjct: 996 LGN-LTKFQYNSRHERVSSINALSHTEHFDFDPNGNLIAYTDQNKHLIYYTYNAHNQQTS 1054 Query: 134 LIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSEES 193 I ++ G+ + ++ + G + P L + + Sbjct: 1055 SIFSDSVYGQDDQI----ISASTVFDGLGRVALNIDPLGNAVEHTHGPDNQLISKTLPKV 1110 Query: 194 RRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGN 253 + + T+ +Q+ + T D+ + G T EY+ +G Sbjct: 1111 DNYYINSNATITSNNSQLAGILTWD-------YDNMNRLKSTTDLNGNTT-QFEYNAFGQ 1162 Query: 254 LLNEENPHQLQQLIRLP--GQQYDEES 278 E NP + GQ D + Sbjct: 1163 KTLERNPDGTETRSLYNKRGQLTDVFT 1189 Score = 42.1 bits (97), Expect = 0.043, Method: Composition-based stats. Identities = 43/244 (17%), Positives = 74/244 (30%), Gaps = 34/244 (13%) Query: 17 YDRHGRLTEKTDLIPEGVIRTDD-------ERTHRYHYDSQHRLVHYTRTQYAEPLVESR 69 Y++ G+LT+ I G + +Y YD+ R H + + Sbjct: 1178 YNKRGQLTDVFTAIRTGDNNYYSNSANLAAGQHSKYLYDNFGRQTHLYQAYGTSEQTCTE 1237 Query: 70 YLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWD-GDR-LTTIQNDRTRIQTIYQ 127 YD G + K + + D + K QVT + +D +R + TIQ Sbjct: 1238 SQYDHNGN-IVKIIKHFKNDPS-------KNQVTDFIFDELNRPIQTIQRGDDMDLDRIT 1289 Query: 128 PGSFTPLIRVETATGELAK--TQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEIL 185 + L +V + A + + DG S+ F +L ++ Sbjct: 1290 YTHYNALGQVTSTEDAEASQTVYVYDVIGRKVEEIDPDGNSMFFEYDAK---GQLITQTD 1346 Query: 186 ADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWC 245 A+ ++ T + T + Y D RG G Sbjct: 1347 AEGIT-----------TTFTYNNRGLTTSQTLGQFTRYYEYDARGNLTKETDYNGTVT-M 1394 Query: 246 AEYD 249 YD Sbjct: 1395 YAYD 1398 >UniRef50_C6IX89 Putative uncharacterized protein n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6IX89_9BACL Length = 1727 Score = 146 bits (367), Expect = 2e-33, Method: Composition-based stats. Identities = 64/324 (19%), Positives = 104/324 (32%), Gaps = 67/324 (20%) Query: 7 IARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLV 66 +A + Y YD + + +T + + YD +R+ Q L Sbjct: 1142 VATGHTFKYEYDLNKNIISRTQ----------NGAVDTFTYDPLNRI------QTESGLK 1185 Query: 67 ESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQ-NDRTRIQTI 125 RY YD G + ++ G + +RLT ++ D + + Sbjct: 1186 NKRYAYDERGNLL---------NVEGRDLRGLTNATFTFD-SLNRLTKVKLEDGKEVSYV 1235 Query: 126 YQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEIL 185 Y E G+ L GG+ + L+ Sbjct: 1236 YNGDGLLY----ERVEGDNRTRYYYDEEAKLIAEANVSGGTPSVTYTYIYDLNG------ 1285 Query: 186 ADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWC 245 R W V ++ Y + G + L ++G Sbjct: 1286 --------RLW---------------SRVDQATGEVQYYQLNGHGDVVGLTDSQGNQLNT 1322 Query: 246 AEYDEWGNLLNEENPHQLQQLIRLPGQQYDEESGLYYNRHRYYDPLQGRYITQDP----I 301 YD WGN EE + + R G+ +D + L Y R R+YDP GR++++DP I Sbjct: 1323 YTYDIWGNPETEE--ETVPNVFRYSGEYWDNTTDLQYLRARWYDPNAGRFVSKDPYQGSI 1380 Query: 302 GLKGGWNFYQYP-LNPVQYIDSMG 324 N Y Y NP+ Y+D G Sbjct: 1381 ANPLSLNRYSYVENNPLIYVDPSG 1404 Score = 59.0 bits (141), Expect = 4e-07, Method: Composition-based stats. Identities = 50/299 (16%), Positives = 85/299 (28%), Gaps = 61/299 (20%) Query: 7 IARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLV 66 + D + Y YD G L ++ D ++ ++ YD +RL ++ Sbjct: 748 VVDDTIFEYTYDEAGNLDQQIDA---------EQNITKFTYDGFNRLTKTLYADGSQD-- 796 Query: 67 ESRY-------LY------------DPLGRRVAKRVWRR-----------ERDLTGWMSL 96 E+ Y Y D LG +A W+ + + Sbjct: 797 ETSYDMVNRTVTYTDPAGVKQRQKLDLLGNTLAVEEWKNGAFTPLQQATYDLEGNALSVT 856 Query: 97 SRKPQVTWYGWDGD-RLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADT 155 K Q T Y +D RL I + R+ Y LI++E + + Sbjct: 857 DGKGQQTLYEYDTLGRLVAITDPEQRVTK-YTYSLAGDLIKIEYPDNTYVEKEYNEAGSL 915 Query: 156 LQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVY 215 ++Q E F ++ L+ S L + +Q Sbjct: 916 IRQMNEEHLVEAYFYDSRGNLIKSLDHSSRFTEYQYNSDNLLTKIQAPDQTIQ------- 968 Query: 216 TPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEW-GNLLNEENPHQLQQLIRLPGQQ 273 Y D G + G+T YD G+L + P + Q Sbjct: 969 --------YAYDAMGRRTRMTDATGSTT--YSYDPMDGSLTSIRYPDGTRIDYTYNKQM 1017 Score = 54.8 bits (130), Expect = 8e-06, Method: Composition-based stats. Identities = 50/296 (16%), Positives = 86/296 (29%), Gaps = 55/296 (18%) Query: 11 AHYLYRYDRHGR--------------------------LTEKTDLIPEGVIRTDDERTHR 44 A + YD +G L K ++ V T E Sbjct: 613 AQTDWEYDNYGNPLVKKVKDDKRTNTVNFSYASPYGKQLLTKQSMVIHAVDGTYTETKQN 672 Query: 45 YHYDSQHRLVHYTRTQYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTW 104 + Y + L+ A + Y YD LGR + +V ++ T VT Sbjct: 673 FTYTAAGDLLTAEDEAGA----VTTYTYDALGRVI--KVLYSDQTQTTVQYDDDHNTVTT 726 Query: 105 YGWDGDR----------LTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLAD 154 G +G L D T + Y + + + + Sbjct: 727 TGPEGIVTLEKYDPFGFLVKEVVDDTIFEYTYDEAGN---LDQQIDAEQNITKFTYDGFN 783 Query: 155 TLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPV 214 L ++ DG +V + D + R+ L G T+ ++ + Sbjct: 784 RLTKTLYADGSQDETSYDMVNR-----TVTYTDPAGVKQRQKLDLLGNTLA-VEEWKNGA 837 Query: 215 YTPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRLP 270 +TP ++ D G L++ +G EYD G L+ +P Q Sbjct: 838 FTPLQQATY---DLEGNALSVTDGKGQQT-LYEYDTLGRLVAITDPEQRVTKYTYS 889 Score = 49.4 bits (116), Expect = 3e-04, Method: Composition-based stats. Identities = 61/343 (17%), Positives = 90/343 (26%), Gaps = 84/343 (24%) Query: 15 YRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYLYDP 74 Y YD G L + D R Y Y+S + L P +Y YD Sbjct: 928 YFYDSRGNLIKSLDH---------SSRFTEYQYNSDNLLTKI-----QAPDQTIQYAYDA 973 Query: 75 LGRRVAKRVWRRERDLT-----GWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQPG 129 +GRR + G ++ R P T + ++ T Sbjct: 974 MGRRTRMTDATGSTTYSYDPMDGSLTSIRYPDGTRIDYTYNKQMRTGYTLTDANGKAAGA 1033 Query: 130 SFT----------------------PLIRVETATGELAKTQRRSLADTLQQSGGEDGGSV 167 S+T L TA E+ + A+ L + G G Sbjct: 1034 SYTLDKMNRVSTLGVVRNAAGTRKSALAAAPTALSEIDQITFDYKANGLLEQGASVNGPS 1093 Query: 168 VFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCD 227 L + A ++++ TV + + + Y D Sbjct: 1094 TSYSYEGYDLTEMTVTAGAAVTAKKAAVNAKENSATVTEAAYGLAKMSVATGHTFKYEYD 1153 Query: 228 HRGLPL-----------------ALVSTEGATEWCAEYDEWGNLLNEEN---------PH 261 + + + G YDE GNLLN E Sbjct: 1154 LNKNIISRTQNGAVDTFTYDPLNRIQTESGLKNKRYAYDERGNLLNVEGRDLRGLTNATF 1213 Query: 262 QLQQLIRLP----------GQQYDEESGLYY------NRHRYY 288 L RL Y+ + GL Y NR RYY Sbjct: 1214 TFDSLNRLTKVKLEDGKEVSYVYNGD-GLLYERVEGDNRTRYY 1255 Score = 47.1 bits (110), Expect = 0.001, Method: Composition-based stats. Identities = 35/192 (18%), Positives = 56/192 (29%), Gaps = 24/192 (12%) Query: 8 ARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVE 67 + LY YD GRL TD ++R +Y Y L+ E Sbjct: 858 GKGQQTLYEYDTLGRLVAITD---------PEQRVTKYTYSLAGDLIKIEYPDNTYVEKE 908 Query: 68 SRYLYDPLGRRVAKRVWRRERDLTGWM-------SLSRKPQVTWYGWDGDRLTT-IQNDR 119 Y+ G + + + + SL + T Y ++ D L T IQ Sbjct: 909 ----YNEAGSLIRQMNEEHLVEAYFYDSRGNLIKSLDHSSRFTEYQYNSDNLLTKIQAPD 964 Query: 120 TRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDR 179 IQ Y + R+ ATG + +L DG + + Sbjct: 965 QTIQYAYD--AMGRRTRMTDATGS-TTYSYDPMDGSLTSIRYPDGTRIDYTYNKQMRTGY 1021 Query: 180 LESEILADRVSE 191 ++ Sbjct: 1022 TLTDANGKAAGA 1033 Score = 42.5 bits (98), Expect = 0.037, Method: Composition-based stats. Identities = 24/109 (22%), Positives = 41/109 (37%), Gaps = 11/109 (10%) Query: 6 RIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPL 65 ++ Y Y+ G L E R + + RY+YD + +L+ P Sbjct: 1225 KLEDGKEVSYVYNGDGLLYE----------RVEGDNRTRYYYDEEAKLIAEANVSGGTPS 1274 Query: 66 VESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTT 114 V Y+YD G R+ RV + ++ + V G++L T Sbjct: 1275 VTYTYIYDLNG-RLWSRVDQATGEVQYYQLNGHGDVVGLTDSQGNQLNT 1322 Searching..................................................done Results from round 3 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_P77779 Putative uncharacterized protein ybfO n=67 Tax=E... 528 e-148 UniRef50_Q328Z1 RhsA protein in rhs element n=7 Tax=Enterobacter... 342 2e-92 UniRef50_Q31U53 Putative uncharacterized protein n=1 Tax=Shigell... 339 9e-92 UniRef50_P16919 Protein rhsD n=261 Tax=Bacteria RepID=RHSD_ECOLI 331 3e-89 UniRef50_UPI0001C341D4 protein RhsA n=1 Tax=Citrobacter youngae ... 314 7e-84 UniRef50_UPI0001B52C8C protein, rhs-like protein n=4 Tax=Enterob... 310 6e-83 UniRef50_C1M8X5 Core protein n=2 Tax=Citrobacter RepID=C1M8X5_9ENTR 308 3e-82 UniRef50_B5PJT7 Protein RhsD n=2 Tax=Enterobacteriaceae RepID=B5... 249 2e-64 UniRef50_Q2SPP2 Rhs family protein n=3 Tax=Hahella chejuensis KC... 248 3e-64 UniRef50_C3JXH8 Putative Rhs protein n=1 Tax=Pseudomonas fluores... 247 6e-64 UniRef50_A1U3R9 YD repeat protein n=3 Tax=Gammaproteobacteria Re... 246 1e-63 UniRef50_Q147B5 Rhs family protein n=2 Tax=Betaproteobacteria Re... 245 2e-63 UniRef50_Q87U70 Rhs family protein n=2 Tax=Pseudomonas RepID=Q87... 243 9e-63 UniRef50_Q4ZLF3 YD repeat n=5 Tax=Pseudomonas syringae group Rep... 238 5e-61 UniRef50_Q7NY44 Probable Rhs-family protein n=2 Tax=Chromobacter... 235 2e-60 UniRef50_Q2SKM2 Rhs family protein n=3 Tax=Hahella chejuensis KC... 235 2e-60 UniRef50_A1TV35 YD repeat protein n=2 Tax=Acidovorax RepID=A1TV3... 233 2e-59 UniRef50_B1J8X0 YD repeat protein n=50 Tax=Gammaproteobacteria R... 229 2e-58 UniRef50_D0KES6 YD repeat protein n=15 Tax=Gammaproteobacteria R... 227 7e-58 UniRef50_Q13ML3 YD repeat protein n=10 Tax=Proteobacteria RepID=... 226 2e-57 UniRef50_B2HXH5 Rhs family protein n=5 Tax=Acinetobacter baumann... 225 2e-57 UniRef50_A7FDJ9 RHS/YD repeat protein n=30 Tax=Enterobacteriacea... 225 2e-57 UniRef50_Q1LDW7 YD repeat n=2 Tax=Burkholderiaceae RepID=Q1LDW7_... 225 3e-57 UniRef50_C5CZG8 RHS protein n=1 Tax=Variovorax paradoxus S110 Re... 224 5e-57 UniRef50_C4SEH6 Insecticidal toxin complex protein n=5 Tax=Yersi... 224 5e-57 UniRef50_Q0JZD5 RHS family protein n=9 Tax=Bacteria RepID=Q0JZD5... 224 7e-57 UniRef50_D0KEV6 RHS protein n=2 Tax=Enterobacteriaceae RepID=D0K... 223 2e-56 UniRef50_Q7MDR0 Rhs family protein n=3 Tax=Vibrio vulnificus Rep... 222 2e-56 UniRef50_Q39K64 Rhs family protein n=22 Tax=Burkholderia RepID=Q... 222 2e-56 UniRef50_A9AE26 Rhs family protein n=10 Tax=cellular organisms R... 221 5e-56 UniRef50_C6AKX3 Rhs family protein n=4 Tax=Aggregatibacter aphro... 220 7e-56 UniRef50_D1T3N5 YD repeat protein n=1 Tax=Acidovorax avenae subs... 220 7e-56 UniRef50_Q6D1M4 Rhs protein n=5 Tax=Enterobacteriaceae RepID=Q6D... 220 8e-56 UniRef50_B3PEN8 Rhsfamily protein n=2 Tax=Cellvibrio japonicus U... 220 8e-56 UniRef50_Q4ZXL5 YD repeat n=4 Tax=Pseudomonas syringae group Rep... 220 1e-55 UniRef50_A9GT29 Insecticidal toxin complex-like protein n=1 Tax=... 220 1e-55 UniRef50_D1T3Q3 YD repeat protein (Fragment) n=2 Tax=Acidovorax ... 220 1e-55 UniRef50_Q4K3M9 Rhs family protein n=5 Tax=Pseudomonas RepID=Q4K... 219 2e-55 UniRef50_B5JS46 NHL repeat containing protein n=2 Tax=gamma prot... 218 3e-55 UniRef50_C7MXD3 Rhs family protein n=1 Tax=Saccharomonospora vir... 218 3e-55 UniRef50_A6GLW0 Rhs family protein n=1 Tax=Limnobacter sp. MED10... 218 5e-55 UniRef50_A1TJG7 YD repeat protein n=4 Tax=Proteobacteria RepID=A... 218 5e-55 UniRef50_O52663 Core protein (Fragment) n=5 Tax=Enterobacteriace... 217 6e-55 UniRef50_C9Y459 Putative uncharacterized protein n=1 Tax=Cronoba... 216 1e-54 UniRef50_Q4ZP55 YD repeat n=10 Tax=Pseudomonas syringae group Re... 216 1e-54 UniRef50_D1T3N4 YD repeat protein n=2 Tax=Betaproteobacteria Rep... 216 2e-54 UniRef50_C0Q6Q9 Rhs-family protein n=27 Tax=Enterobacteriaceae R... 216 2e-54 UniRef50_A9FZA9 Rhs family protein n=1 Tax=Sorangium cellulosum ... 215 3e-54 UniRef50_C9Y441 Putative uncharacterized protein n=1 Tax=Cronoba... 215 4e-54 UniRef50_Q6LUC6 Hypothetical nucleotidyltransferase n=1 Tax=Phot... 214 6e-54 UniRef50_A9C0N8 YD repeat protein n=5 Tax=cellular organisms Rep... 214 6e-54 UniRef50_C8Q7Z5 YD repeat protein n=8 Tax=Enterobacteriaceae Rep... 214 7e-54 UniRef50_C6M5B1 Rhs-related protein n=7 Tax=Proteobacteria RepID... 213 8e-54 UniRef50_A5GE16 YD repeat protein n=1 Tax=Geobacter uraniireduce... 213 9e-54 UniRef50_C9NF93 YD repeat protein n=1 Tax=Streptomyces flavogris... 213 1e-53 UniRef50_B4EGW8 RHS-family protein n=9 Tax=Burkholderiaceae RepI... 212 2e-53 UniRef50_B2VH58 Rhs family protein n=5 Tax=Enterobacteriaceae Re... 212 2e-53 UniRef50_C6WJA6 YD repeat protein n=3 Tax=Actinosynnema mirum DS... 211 3e-53 UniRef50_Q4ZYW6 YD repeat n=1 Tax=Pseudomonas syringae pv. syrin... 211 4e-53 UniRef50_A6GBQ3 Putative uncharacterized protein n=1 Tax=Plesioc... 211 4e-53 UniRef50_Q12LF3 YD repeat n=2 Tax=Shewanella denitrificans OS217... 211 5e-53 UniRef50_B7LTT0 Putative uncharacterized protein n=4 Tax=Enterob... 211 6e-53 UniRef50_D1VCV7 YD repeat protein n=1 Tax=Frankia sp. EuI1c RepI... 210 8e-53 UniRef50_A1TR18 YD repeat protein n=8 Tax=Acidovorax RepID=A1TR1... 210 8e-53 UniRef50_UPI0001B4DD67 Rhs protein n=1 Tax=Streptomyces hygrosco... 210 8e-53 UniRef50_A7FN18 RHS/YD repeat protein n=5 Tax=cellular organisms... 210 1e-52 UniRef50_B3PHE6 RHS Repeat family n=5 Tax=cellular organisms Rep... 209 2e-52 UniRef50_Q0K1I3 Insecticidal toxin complex protein n=2 Tax=Prote... 209 2e-52 UniRef50_UPI0001BC4026 Rhs family protein n=6 Tax=Neisseria RepI... 208 3e-52 UniRef50_C0EPY1 Putative uncharacterized protein n=7 Tax=Neisser... 208 3e-52 UniRef50_A7K3Q8 Rhs family protein n=7 Tax=Vibrio RepID=A7K3Q8_V... 208 4e-52 UniRef50_A4SKJ3 Rhs family protein n=2 Tax=Bacteria RepID=A4SKJ3... 207 6e-52 UniRef50_B4ETQ2 Rhs-family protein n=9 Tax=Enterobacteriaceae Re... 207 6e-52 UniRef50_A8ZSG6 YD repeat protein n=1 Tax=Desulfococcus oleovora... 206 1e-51 UniRef50_C3IAE1 Insecticidal toxin complex protein TccC (Toxin c... 206 1e-51 UniRef50_D1S833 YD repeat protein n=1 Tax=Micromonospora auranti... 206 1e-51 UniRef50_A7BPL6 Protein containing RHS repeats n=2 Tax=Beggiatoa... 206 2e-51 UniRef50_UPI00016A9A82 Rhs family protein n=2 Tax=Burkholderia o... 205 2e-51 UniRef50_A1AK54 YD repeat protein n=1 Tax=Pelobacter propionicus... 205 2e-51 UniRef50_Q6LUC4 Putative uncharacterized protein n=1 Tax=Photoba... 205 3e-51 UniRef50_B5H9Z7 Rhs protein n=2 Tax=Streptomyces RepID=B5H9Z7_STRPR 205 3e-51 UniRef50_C6M9F4 Rhs family protein n=8 Tax=Neisseria RepID=C6M9F... 205 3e-51 UniRef50_B6A881 YenC1 n=1 Tax=Yersinia sp. MH-1 RepID=B6A881_9ENTR 205 3e-51 UniRef50_B4V6T6 Rhs protein n=2 Tax=Streptomyces RepID=B4V6T6_9ACTO 205 3e-51 UniRef50_UPI0001B56FBA YD repeat-containing protein n=1 Tax=Stre... 205 4e-51 UniRef50_B4UIF2 YD repeat protein n=1 Tax=Anaeromyxobacter sp. K... 205 5e-51 UniRef50_A7FDK7 YD/RHS repeat protein n=25 Tax=Enterobacteriacea... 204 7e-51 UniRef50_C5ALM7 YD repeat protein n=19 Tax=Proteobacteria RepID=... 204 8e-51 UniRef50_A4FJ21 YD repeat protein n=1 Tax=Saccharopolyspora eryt... 203 1e-50 UniRef50_C1M4X0 Predicted protein n=1 Tax=Citrobacter sp. 30_2 R... 203 2e-50 UniRef50_A6G340 Putative uncharacterized protein n=2 Tax=Plesioc... 202 2e-50 UniRef50_UPI0001B53B37 YD repeat protein n=1 Tax=Streptomyces sp... 202 3e-50 UniRef50_Q3JM84 TccC4 n=5 Tax=Burkholderia pseudomallei RepID=Q3... 201 3e-50 UniRef50_Q2T5B9 YD repeat protein n=39 Tax=Proteobacteria RepID=... 201 4e-50 UniRef50_C4DNE5 Rhs family protein n=1 Tax=Stackebrandtia nassau... 201 5e-50 UniRef50_B7GLY4 Rhs family protein n=3 Tax=Anoxybacillus flavith... 201 6e-50 UniRef50_A1TSU8 YD repeat protein n=4 Tax=Acidovorax RepID=A1TSU... 201 6e-50 UniRef50_C7QCF6 YD repeat protein n=1 Tax=Catenulispora acidiphi... 200 8e-50 UniRef50_Q1I7Q5 Putative uncharacterized protein n=11 Tax=Pseudo... 200 9e-50 UniRef50_C5AA19 Rhs family protein n=1 Tax=Burkholderia glumae B... 200 1e-49 UniRef50_Q2SIG5 Rhs family protein n=1 Tax=Hahella chejuensis KC... 200 1e-49 UniRef50_A3KUM5 Rhs family protein n=10 Tax=Pseudomonas aerugino... 200 1e-49 UniRef50_A0LJM9 YD repeat protein n=3 Tax=Syntrophobacter fumaro... 199 2e-49 UniRef50_B3EU05 Putative uncharacterized protein n=1 Tax=Candida... 199 2e-49 UniRef50_C8QVK4 YD repeat protein n=4 Tax=Desulfurivibrio alkali... 199 2e-49 UniRef50_Q399U9 Rhs family protein n=3 Tax=Proteobacteria RepID=... 199 2e-49 UniRef50_C4DNE3 Putative uncharacterized protein n=1 Tax=Stackeb... 199 2e-49 UniRef50_B8FBZ2 YD repeat protein n=1 Tax=Desulfatibacillum alke... 198 4e-49 UniRef50_C8QGI4 YD repeat protein n=1 Tax=Pantoea sp. At-9b RepI... 198 5e-49 UniRef50_Q30CR7 LipX3 n=4 Tax=Streptomyces RepID=Q30CR7_STRAU 198 5e-49 UniRef50_Q6XP55 TcYF3 n=1 Tax=Yersinia frederiksenii RepID=Q6XP5... 198 5e-49 UniRef50_B2TKH9 YD repeat protein n=1 Tax=Clostridium botulinum ... 197 6e-49 UniRef50_C9RZN2 YD repeat protein n=2 Tax=Geobacillus RepID=C9RZ... 197 6e-49 UniRef50_C7HJS3 YD repeat protein (Fragment) n=3 Tax=Clostridium... 197 8e-49 UniRef50_B8DCN9 Wall-associated protein n=14 Tax=Bacillales RepI... 197 9e-49 UniRef50_B2K1J9 YD repeat protein n=23 Tax=Yersinia RepID=B2K1J9... 196 2e-48 UniRef50_C6CNW6 YD repeat protein n=8 Tax=Enterobacteriaceae Rep... 196 2e-48 UniRef50_D0KZB0 YD repeat protein n=1 Tax=Halothiobacillus neapo... 195 2e-48 UniRef50_A1TTP6 YD repeat protein n=2 Tax=Acidovorax citrulli AA... 195 3e-48 UniRef50_D2TGW0 Putative Rhs protein n=2 Tax=Citrobacter RepID=D... 194 5e-48 UniRef50_B4V251 LipX3 n=2 Tax=Streptomyces RepID=B4V251_9ACTO 194 5e-48 UniRef50_Q3K7R2 Putative insecticidal toxin n=2 Tax=Pseudomonas ... 193 1e-47 UniRef50_A9AKU8 Type VI secretion system Vgr family protein n=10... 193 1e-47 UniRef50_B1C8M0 Putative uncharacterized protein n=2 Tax=Anaerof... 193 2e-47 UniRef50_B6A882 YenC2 n=1 Tax=Yersinia sp. MH-1 RepID=B6A882_9ENTR 192 2e-47 UniRef50_D1JME6 Rhs family protein n=22 Tax=Bacteroides RepID=D1... 192 2e-47 UniRef50_Q10YX3 YD repeat protein n=1 Tax=Trichodesmium erythrae... 192 2e-47 UniRef50_B9A933 SpvB-motif protein n=1 Tax=Wolbachia endosymbion... 192 2e-47 UniRef50_C6CI62 YD repeat protein n=7 Tax=Enterobacteriaceae Rep... 192 3e-47 UniRef50_A6FF65 TccC3 n=1 Tax=Moritella sp. PE36 RepID=A6FF65_9GAMM 192 3e-47 UniRef50_Q3JM67 Insecticidal toxin complex protein TcdB2 n=11 Ta... 191 3e-47 UniRef50_Q07833 Wall-associated protein n=18 Tax=Bacillaceae Rep... 191 4e-47 UniRef50_C7QG23 YD repeat protein n=2 Tax=Catenulispora acidiphi... 191 4e-47 UniRef50_B1KGR6 YD repeat protein n=1 Tax=Shewanella woodyi ATCC... 191 5e-47 UniRef50_C7Q0A7 YD repeat protein n=2 Tax=Catenulispora acidiphi... 191 5e-47 UniRef50_A6M1K5 YD repeat protein n=4 Tax=Clostridium RepID=A6M1... 191 6e-47 UniRef50_P32109 Putative uncharacterized protein yibJ n=14 Tax=B... 190 8e-47 UniRef50_Q1IA36 Insecticidal toxin, SepC/Tcc class n=1 Tax=Pseud... 190 9e-47 UniRef50_UPI0001AF2680 RHS/YD repeat-containing protein n=1 Tax=... 190 9e-47 UniRef50_C1B7W9 Putative uncharacterized protein n=1 Tax=Rhodoco... 190 9e-47 UniRef50_A4J380 YD repeat protein n=3 Tax=Bacteria RepID=A4J380_... 190 1e-46 UniRef50_D0BWK2 YD repeat protein n=1 Tax=Acinetobacter sp. RUH2... 190 1e-46 UniRef50_C7Q0B8 YD repeat protein n=1 Tax=Catenulispora acidiphi... 190 1e-46 UniRef50_Q73C66 Wall associated protein, putative n=73 Tax=Bacil... 189 2e-46 UniRef50_B5I7B2 Rhs repeat protein n=1 Tax=Streptomyces sviceus ... 189 2e-46 UniRef50_C7QAC6 YD repeat protein n=2 Tax=Bacteria RepID=C7QAC6_... 189 2e-46 UniRef50_A9FBU5 Conserved carbohydrate-binding protein, Rhs fami... 189 2e-46 UniRef50_B1HM94 Cell wall-associated protein n=5 Tax=Lysinibacil... 189 3e-46 UniRef50_B4SV70 Rhs-family protein n=42 Tax=Enterobacteriaceae R... 188 3e-46 UniRef50_B4VFT3 Rhs protein n=4 Tax=Bacteria RepID=B4VFT3_9ACTO 188 3e-46 UniRef50_A4THD8 Insecticidal toxin n=46 Tax=Yersinia RepID=A4THD... 188 3e-46 UniRef50_A8A655 Rhs family protein n=14 Tax=Enterobacteriaceae R... 188 4e-46 UniRef50_A9GRU0 Rhs family protein n=2 Tax=Sorangium cellulosum ... 188 5e-46 UniRef50_D0HCV2 Rhs protein n=3 Tax=Vibrio mimicus VM223 RepID=D... 188 6e-46 UniRef50_Q2SKC0 Rhs family protein n=8 Tax=Hahella chejuensis KC... 188 6e-46 UniRef50_Q7N2G0 Complete genome; segment 11/17 n=4 Tax=Gammaprot... 187 6e-46 UniRef50_B7GX39 Protein rhsD n=4 Tax=Acinetobacter baumannii Rep... 187 7e-46 UniRef50_C4NV50 Rhs repeat family protein n=10 Tax=Gammaproteoba... 187 8e-46 UniRef50_C9RNI1 FG-GAP repeat protein n=2 Tax=Fibrobacter succin... 187 9e-46 UniRef50_D1AA66 YD repeat-containing protein n=1 Tax=Thermomonos... 186 1e-45 UniRef50_Q9L0E3 Putative Rhs protein n=2 Tax=Streptomyces RepID=... 186 1e-45 UniRef50_B3YAC7 YD repeat protein n=3 Tax=Salmonella enterica Re... 185 2e-45 UniRef50_A0LQM7 NHL repeat containing protein n=1 Tax=Syntrophob... 185 3e-45 UniRef50_Q466C0 Putative uncharacterized protein n=1 Tax=Methano... 185 3e-45 UniRef50_Q3JSF4 RhsD protein n=23 Tax=Burkholderia pseudomallei ... 185 3e-45 UniRef50_B3PEK8 RHS Repeat family n=1 Tax=Cellvibrio japonicus U... 185 4e-45 UniRef50_B8FIJ1 YD repeat protein n=1 Tax=Desulfatibacillum alke... 185 4e-45 UniRef50_Q2Y592 Peptidase C39, bacteriocin processing n=1 Tax=Ni... 185 4e-45 UniRef50_B4ETQ7 Putative Rhs-family protein n=3 Tax=Enterobacter... 184 6e-45 UniRef50_C5CXA7 YD repeat protein n=1 Tax=Variovorax paradoxus S... 184 7e-45 UniRef50_C6M9F5 RHS family protein n=2 Tax=Bacteria RepID=C6M9F5... 183 9e-45 UniRef50_A9GIJ6 Conserved carbohydrate-binding protein, Rhs fami... 183 9e-45 UniRef50_A6EH31 Rhs family protein n=2 Tax=cellular organisms Re... 183 2e-44 UniRef50_C7MZM5 Rhs family protein n=1 Tax=Saccharomonospora vir... 183 2e-44 UniRef50_Q3K7R3 Putative insecticidal toxin n=1 Tax=Pseudomonas ... 182 2e-44 UniRef50_A3DF74 YD repeat protein n=17 Tax=Clostridium thermocel... 182 2e-44 UniRef50_C2HXF5 Rhs family protein n=1 Tax=Vibrio cholerae bv. a... 182 2e-44 UniRef50_C8W2A7 YD repeat protein n=3 Tax=Desulfotomaculum aceto... 182 2e-44 UniRef50_D0KW21 YD repeat protein n=1 Tax=Halothiobacillus neapo... 182 3e-44 UniRef50_Q48LL6 Rhs family protein n=1 Tax=Pseudomonas syringae ... 182 3e-44 UniRef50_B6FUB3 Putative uncharacterized protein n=1 Tax=Clostri... 182 3e-44 UniRef50_B9M2L6 YD repeat protein n=6 Tax=Geobacter sp. FRC-32 R... 181 4e-44 UniRef50_C8W2V9 YD repeat protein n=3 Tax=Desulfotomaculum aceto... 181 4e-44 UniRef50_A9GD22 Conserved carbohydrate-binding protein, Rhs fami... 181 4e-44 UniRef50_B1HKQ3 Rhs family protein n=1 Tax=Burkholderia pseudoma... 181 4e-44 UniRef50_UPI0001AF662D insecticidal toxin complex protein n=1 Ta... 181 5e-44 UniRef50_D0Z598 Rhs family protein n=1 Tax=Photobacterium damsel... 181 5e-44 UniRef50_A9C2K3 YD repeat protein n=1 Tax=Delftia acidovorans SP... 181 5e-44 UniRef50_Q2SGE8 Rhs family protein n=1 Tax=Hahella chejuensis KC... 181 7e-44 UniRef50_B2HAQ4 RhsD protein n=4 Tax=Burkholderia RepID=B2HAQ4_B... 180 7e-44 UniRef50_A9FQL9 Putative uncharacterized protein n=1 Tax=Sorangi... 180 1e-43 UniRef50_C3JCI6 Rhs family protein n=4 Tax=Bacteria RepID=C3JCI6... 180 1e-43 UniRef50_B2PVY9 Putative uncharacterized protein n=12 Tax=Entero... 180 1e-43 UniRef50_B6B5M8 Putative uncharacterized protein n=1 Tax=Rhodoba... 180 1e-43 UniRef50_C6CPH2 YD repeat protein n=11 Tax=Enterobacteriaceae Re... 180 1e-43 UniRef50_Q48IL5 Insecticidal toxin complex protein, putative n=2... 180 2e-43 UniRef50_Q396B9 Rhs family protein n=1 Tax=Burkholderia sp. 383 ... 179 2e-43 UniRef50_D2KTW4 Putative uncharacterized protein n=2 Tax=Strepto... 179 2e-43 UniRef50_Q2SFR5 Rhs family protein n=1 Tax=Hahella chejuensis KC... 179 2e-43 UniRef50_C4DPW8 Rhs family protein n=1 Tax=Stackebrandtia nassau... 179 2e-43 UniRef50_A9BX63 YD repeat protein n=2 Tax=cellular organisms Rep... 179 2e-43 UniRef50_UPI0001B52595 rhsE element core protein RshE n=1 Tax=Es... 179 3e-43 UniRef50_Q3KHR5 Putative insecticidal toxin n=2 Tax=Pseudomonas ... 178 3e-43 UniRef50_A9EZF2 Conserved carbohydrate-binding protein, Rhs fami... 178 4e-43 UniRef50_Q3BS17 Rhs family protein n=18 Tax=Xanthomonas RepID=Q3... 178 4e-43 UniRef50_O85157 Insecticidal toxin complex protein TccC n=15 Tax... 178 5e-43 UniRef50_D2UF28 Putative rhs family protein n=2 Tax=Xanthomonas ... 178 5e-43 UniRef50_Q8PMX0 Wall-associated protein n=2 Tax=Xanthomonas RepI... 178 6e-43 UniRef50_B1ZNT0 YD repeat protein n=1 Tax=Opitutus terrae PB90-1... 177 6e-43 UniRef50_C5SEN5 Putative uncharacterized protein n=1 Tax=Allochr... 177 7e-43 UniRef50_A9FBB8 Conserved carbohydrate-binding protein, Rhs fami... 177 7e-43 UniRef50_C3IAE0 Insecticidal toxin complex protein TccC (Toxin c... 177 8e-43 UniRef50_B0VRR7 Putative uncharacterized protein n=1 Tax=Acineto... 177 8e-43 UniRef50_Q73MF0 YD repeat protein n=4 Tax=Treponema denticola Re... 177 1e-42 UniRef50_D0THP1 YD repeat protein n=1 Tax=Bacteroides sp. 2_1_33... 177 1e-42 UniRef50_B4WG21 RHS Repeat family n=1 Tax=Synechococcus sp. PCC ... 176 1e-42 UniRef50_C4DQZ4 Rhs family protein n=2 Tax=Stackebrandtia nassau... 176 1e-42 UniRef50_UPI0001B58169 YD repeat-containing protein n=1 Tax=Stre... 176 1e-42 UniRef50_B8FA91 YD repeat protein n=6 Tax=Desulfatibacillum alke... 176 1e-42 UniRef50_Q39VL5 YD repeat protein n=2 Tax=Geobacter metallireduc... 176 2e-42 UniRef50_D0LPS9 YD repeat protein n=1 Tax=Haliangium ochraceum D... 176 2e-42 UniRef50_C7BMQ9 Insecticial toxin complex n=1 Tax=Photorhabdus a... 176 2e-42 UniRef50_Q6MNG4 Putative uncharacterized protein n=1 Tax=Bdellov... 176 2e-42 UniRef50_C7BJB9 Insecticidal toxin complex TccC n=1 Tax=Photorha... 176 2e-42 UniRef50_D0KWY8 YD repeat protein n=1 Tax=Halothiobacillus neapo... 176 2e-42 UniRef50_A5L0D2 Rhs family protein-like protein n=2 Tax=Vibriona... 175 3e-42 UniRef50_B2K4S5 YD repeat protein n=62 Tax=Gammaproteobacteria R... 175 4e-42 UniRef50_UPI000174555B YD repeat protein n=2 Tax=Verrucomicrobiu... 174 4e-42 UniRef50_A9EVR3 Conserved carbohydrate-binding protein, Rhs fami... 174 5e-42 UniRef50_C8W2T8 YD repeat protein n=2 Tax=Desulfotomaculum aceto... 174 5e-42 UniRef50_Q3JM82 TccC3 n=4 Tax=Burkholderia pseudomallei RepID=Q3... 174 6e-42 UniRef50_B1FCF5 YD repeat protein n=1 Tax=Burkholderia ambifaria... 174 7e-42 UniRef50_Q2PC71 Putative uncharacterized protein Rub7 n=1 Tax=St... 174 8e-42 UniRef50_A9EW02 Conserved exported carbohydrate-binding protein,... 174 8e-42 UniRef50_C9P064 Rhs family protein n=1 Tax=Vibrio coralliilyticu... 174 8e-42 UniRef50_B0MES5 Putative uncharacterized protein n=3 Tax=Clostri... 174 8e-42 UniRef50_C7PJF4 YD repeat protein n=2 Tax=Chitinophaga pinensis ... 173 9e-42 UniRef50_B4SL73 YD repeat protein n=4 Tax=Stenotrophomonas malto... 173 1e-41 UniRef50_C5AIF2 Rhs family protein n=1 Tax=Burkholderia glumae B... 173 1e-41 UniRef50_C1ZMA7 Rhs family protein n=1 Tax=Planctomyces limnophi... 173 1e-41 UniRef50_D1R7X9 Putative uncharacterized protein n=2 Tax=Parachl... 173 2e-41 UniRef50_B5S3N8 Rhs-related protein n=1 Tax=Ralstonia solanacear... 173 2e-41 UniRef50_B4B5R8 YD repeat protein n=1 Tax=Cyanothece sp. PCC 782... 173 2e-41 UniRef50_Q7MZ20 Insecticidal toxin complex protein TccC7 n=4 Tax... 173 2e-41 UniRef50_Q88FK6 RHS family protein, putative n=1 Tax=Pseudomonas... 172 2e-41 UniRef50_A6G3J9 Rhs family protein-like protein n=1 Tax=Plesiocy... 172 2e-41 UniRef50_A8T2S3 Peptidase C39, bacteriocin processing n=2 Tax=Vi... 172 2e-41 UniRef50_A3NNM1 Protein RhsD n=20 Tax=pseudomallei group RepID=A... 171 4e-41 UniRef50_B9B9U8 YD repeat protein n=1 Tax=Burkholderia multivora... 171 4e-41 UniRef50_UPI0001744BEA hypothetical protein VspiD_17785 n=1 Tax=... 171 4e-41 Sequences not found previously or not previously below threshold: >UniRef50_P77779 Putative uncharacterized protein ybfO n=67 Tax=Enterobacteriaceae RepID=YBFO_ECOLI Length = 477 Score = 528 bits (1359), Expect = e-148, Method: Composition-based stats. Identities = 477/477 (100%), Positives = 477/477 (100%) Query: 1 MWPDNRIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQ 60 MWPDNRIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQ Sbjct: 1 MWPDNRIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQ 60 Query: 61 YAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRT 120 YAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRT Sbjct: 61 YAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRT 120 Query: 121 RIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRL 180 RIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRL Sbjct: 121 RIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRL 180 Query: 181 ESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEG 240 ESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEG Sbjct: 181 ESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEG 240 Query: 241 ATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEESGLYYNRHRYYDPLQGRYITQDP 300 ATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEESGLYYNRHRYYDPLQGRYITQDP Sbjct: 241 ATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEESGLYYNRHRYYDPLQGRYITQDP 300 Query: 301 IGLKGGWNFYQYPLNPVQYIDSMGLASKYGHLNNGGYGARPNKPPTPDPSKLPDIAKQLR 360 IGLKGGWNFYQYPLNPVQYIDSMGLASKYGHLNNGGYGARPNKPPTPDPSKLPDIAKQLR Sbjct: 301 IGLKGGWNFYQYPLNPVQYIDSMGLASKYGHLNNGGYGARPNKPPTPDPSKLPDIAKQLR 360 Query: 361 LPYPIDQASSAPNVFKTFFRALSPYDYTLYCRKWVKPNLTCTPQDDSQYPGMDTKTASDY 420 LPYPIDQASSAPNVFKTFFRALSPYDYTLYCRKWVKPNLTCTPQDDSQYPGMDTKTASDY Sbjct: 361 LPYPIDQASSAPNVFKTFFRALSPYDYTLYCRKWVKPNLTCTPQDDSQYPGMDTKTASDY 420 Query: 421 LPQTNWPTTQLPPGYTCAEPYLFPDINKPDGPATAGIDDLGEILAKMKQRTSRGIRK 477 LPQTNWPTTQLPPGYTCAEPYLFPDINKPDGPATAGIDDLGEILAKMKQRTSRGIRK Sbjct: 421 LPQTNWPTTQLPPGYTCAEPYLFPDINKPDGPATAGIDDLGEILAKMKQRTSRGIRK 477 >UniRef50_Q328Z1 RhsA protein in rhs element n=7 Tax=Enterobacteriaceae RepID=Q328Z1_SHIDS Length = 1213 Score = 342 bits (877), Expect = 2e-92, Method: Composition-based stats. Identities = 312/335 (93%), Positives = 318/335 (94%) Query: 1 MWPDNRIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQ 60 MWPDNRIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQ Sbjct: 847 MWPDNRIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQ 906 Query: 61 YAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRT 120 YAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKP+VTWYGWDGDRLTTIQNDRT Sbjct: 907 YAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPEVTWYGWDGDRLTTIQNDRT 966 Query: 121 RIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRL 180 RIQTIYQPGSFTPLIRVETATGELAKTQRRSLAD LQQSGGEDGGSVVFPPVLVQMLDRL Sbjct: 967 RIQTIYQPGSFTPLIRVETATGELAKTQRRSLADALQQSGGEDGGSVVFPPVLVQMLDRL 1026 Query: 181 ESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEG 240 ESEILADRVSEESRRWLASCGLTV QMQ+QMDPVYTPARKIHLYHCDH GLPLALVSTEG Sbjct: 1027 ESEILADRVSEESRRWLASCGLTVAQMQSQMDPVYTPARKIHLYHCDHHGLPLALVSTEG 1086 Query: 241 ATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEESGLYYNRHRYYDPLQGRYITQDP 300 ATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEESGLYYNRHRYYDPLQGRYITQDP Sbjct: 1087 ATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEESGLYYNRHRYYDPLQGRYITQDP 1146 Query: 301 IGLKGGWNFYQYPLNPVQYIDSMGLASKYGHLNNG 335 IGLKGGWN Y Y LNP+ ID +GL+ + Sbjct: 1147 IGLKGGWNLYGYQLNPISDIDPLGLSMWEDAKSGA 1181 Score = 65.6 bits (158), Expect = 4e-09, Method: Composition-based stats. Identities = 37/193 (19%), Positives = 61/193 (31%), Gaps = 20/193 (10%) Query: 13 YLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYLY 72 Y +DR G++T R YDS+ +L+ Q E RY Y Sbjct: 550 TRYDHDRLGQMTAVHREKGLSQYR---------AYDSRGQLIAVKDMQGH----EMRYEY 596 Query: 73 DPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYG------WDGDRLTTIQNDRTRIQTIY 126 + G A R+ T + + + + T G +D T + Sbjct: 597 NAAGDLTAVIAPDGSRNGTQYDAWGKAIRTTQGGLTRNMEYDAAGRVIRLTSENGSHTTF 656 Query: 127 QPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILA 186 + LI+ ET + L L +S E + ++ R A Sbjct: 657 RYDVLDRLIQ-ETGFDGRTQRYHHDLTGKLIRSEDEGLVTHWHYDEADRLTHRTVKGETA 715 Query: 187 DRVSEESRRWLAS 199 +R + R WL+ Sbjct: 716 ERWRYDERGWLSG 728 Score = 64.4 bits (155), Expect = 8e-09, Method: Composition-based stats. Identities = 44/316 (13%), Positives = 78/316 (24%), Gaps = 60/316 (18%) Query: 3 PDNRIARDAHYLYRYDRHGRLTEKTDLIPEGVIR-------------TDDERTHRYHYDS 49 D + + +D GRL +TD T D R ++Y+ Sbjct: 416 ADGSVTQSQ-----FDAVGRLKAQTDAAGRTTEYSPDVVTGLITRITTPDGRASAFYYNH 470 Query: 50 QHRLVHYTRTQYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRK---------- 99 +L T E E YD GR + + + + + Sbjct: 471 HSQLTSATGPDGLELRRE----YDESGRLIQETAHNGDITRYRYDNPHSDFPCATEDATG 526 Query: 100 --------------------PQVTWYGWDGDRLTTIQNDRTRIQTIYQPGSFTPLIRVET 139 VT Y D T + + S LI V+ Sbjct: 527 SRKTMTWSRYGQLLSFTDCSGYVTRYDHDRLGQMTAVHREKGLSQYRAYDSRGQLIAVKD 586 Query: 140 ATGELAKTQRRSLADT---LQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSEESRRW 196 G + + + D + G +G ++ + + + R Sbjct: 587 MQGHEMRYEYNAAGDLTAVIAPDGSRNGTQYDAWGKAIRTTQGGLTRNMEYDAAGRVIRL 646 Query: 197 LASCGLTVEQMQNQMD---PVYTPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGN 253 + G + +D + YH D G + YDE Sbjct: 647 TSENGSHTTFRYDVLDRLIQETGFDGRTQRYHHDLTGKLIRSEDEG--LVTHWHYDEADR 704 Query: 254 LLNEENPHQLQQLIRL 269 L + + + R Sbjct: 705 LTHRTVKGETAERWRY 720 Score = 54.8 bits (130), Expect = 7e-06, Method: Composition-based stats. Identities = 46/287 (16%), Positives = 65/287 (22%), Gaps = 44/287 (15%) Query: 9 RDAHYLYRYDR--HGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLV 66 + YD GR+ + RY YD R+ Q + Sbjct: 330 NTQVRSFTYDDKYRGRMVAHRHTGRPEI---------RYRYDRDGRVTE----QLNPAGL 376 Query: 67 ESRYLY--------DPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQND 118 Y Y D L RR VT +D Q D Sbjct: 377 SYTYQYEKDRITITDSLDRREVLHTQGEGGLKRVVKKEHADGSVTQSQFDAVGRLKAQTD 436 Query: 119 RTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLD 178 T Y P T LI T A + L + G DG + Sbjct: 437 AAGRTTEYSPDVVTGLITRITTPDGRASAFYYNHHSQLTSATGPDGLELRREYD---ESG 493 Query: 179 RLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHL--------------- 223 RL E + + +R + Sbjct: 494 RLIQETAHN--GDITRYRYDNPHSDFPCATEDATGSRKTMTWSRYGQLLSFTDCSGYVTR 551 Query: 224 YHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRLP 270 Y D G A+ +G YD G L+ ++ + Sbjct: 552 YDHDRLGQMTAVHREKG-LSQYRAYDSRGQLIAVKDMQGHEMRYEYN 597 Score = 51.7 bits (122), Expect = 6e-05, Method: Composition-based stats. Identities = 24/203 (11%), Positives = 49/203 (24%), Gaps = 22/203 (10%) Query: 40 ERTHRYHYDSQHRLVHYTRTQYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGW-MSLSR 98 +T Y Y RL T A + Y DP G R+ + L+ W + Sbjct: 796 RQTRSYSYSDSGRLTGV-HTTAANLDIRIPYATDPAGNRLPDPELHPDSTLSMWPDNRIA 854 Query: 99 KPQVTWYGWDGDRLTTIQND---------RTRIQTIYQPGSFTPLIRVETATGE----LA 145 + Y +D T + D Y S L+ + Sbjct: 855 RDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVES 914 Query: 146 KTQRRSLADTLQQSGGEDGGSVV------FPPVLVQMLDRLESEILADRVSEESRRWLAS 199 + L + + + P + + + + + + Sbjct: 915 RYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPEVTWYGWDGD-RLTTIQNDRTRIQTIYQ 973 Query: 200 CGLTVEQMQNQMDPVYTPARKIH 222 G ++ + + Sbjct: 974 PGSFTPLIRVETATGELAKTQRR 996 Score = 46.3 bits (108), Expect = 0.003, Method: Composition-based stats. Identities = 39/286 (13%), Positives = 68/286 (23%), Gaps = 48/286 (16%) Query: 18 DRHGR-----LTEKTDLIPEGVIRTDDERT------------HRYHYDSQHRLVHYT--- 57 D GR LT + E + T Y D+ RL Sbjct: 239 DGAGRHFRLVLTTQAQRAEEARQQASSGGTEPSAFPDTLPGYTEYGRDNGIRLSAVWLTH 298 Query: 58 ---RTQYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTT 114 RY + P G + + + + Y Sbjct: 299 DPEYPDNLPAAPLVRYGWTPRGEL-----------AAVYDRSNTQVRSFTYDDKYRGRMV 347 Query: 115 IQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLV 174 R + Y+ + G + D + + D V+ Sbjct: 348 AHRHTGRPEIRYRYDRDGRVTEQLNPAG--LSYTYQYEKDRITITDSLDRREVLHTQGEG 405 Query: 175 QM--------LDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDP---VYTPARKIHL 223 + D ++ D V + A+ T + TP + Sbjct: 406 GLKRVVKKEHADGSVTQSQFDAVGRLKAQTDAAGRTTEYSPDVVTGLITRITTPDGRASA 465 Query: 224 YHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRL 269 ++ +H + +G EYDE G L+ E + R Sbjct: 466 FYYNHHSQLTSATGPDGLEL-RREYDESGRLIQETAHNGDITRYRY 510 >UniRef50_Q31U53 Putative uncharacterized protein n=1 Tax=Shigella boydii Sb227 RepID=Q31U53_SHIBS Length = 927 Score = 339 bits (870), Expect = 9e-92, Method: Composition-based stats. Identities = 309/330 (93%), Positives = 316/330 (95%) Query: 1 MWPDNRIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQ 60 MWPDNRIARDAHYLYRYDRHGRLTEKTDLIPEG IRTDDERTH YHYDSQHRLVHYTRTQ Sbjct: 578 MWPDNRIARDAHYLYRYDRHGRLTEKTDLIPEGGIRTDDERTHWYHYDSQHRLVHYTRTQ 637 Query: 61 YAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRT 120 YAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKP+VTWYGWDGDRLTTIQNDRT Sbjct: 638 YAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPEVTWYGWDGDRLTTIQNDRT 697 Query: 121 RIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRL 180 RIQT+YQPGSFTPLIRVETATGELAKTQRRSLAD LQQSGGEDGGSVVFPPVLVQMLDRL Sbjct: 698 RIQTVYQPGSFTPLIRVETATGELAKTQRRSLADALQQSGGEDGGSVVFPPVLVQMLDRL 757 Query: 181 ESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEG 240 ESEILADRVSEESRRWLASCGLTV QM+NQMDPVYTPARKIHLYHCDHRGLPL L+STEG Sbjct: 758 ESEILADRVSEESRRWLASCGLTVAQMKNQMDPVYTPARKIHLYHCDHRGLPLVLISTEG 817 Query: 241 ATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEESGLYYNRHRYYDPLQGRYITQDP 300 ATEWCAEYDEWGNLLNEENPH LQQLIRLPGQQYDEESGLYYNRHRYYDPLQGRYITQDP Sbjct: 818 ATEWCAEYDEWGNLLNEENPHHLQQLIRLPGQQYDEESGLYYNRHRYYDPLQGRYITQDP 877 Query: 301 IGLKGGWNFYQYPLNPVQYIDSMGLASKYG 330 IGLKGGWNFYQYPL+PV +D +GL Sbjct: 878 IGLKGGWNFYQYPLSPVNSMDPLGLYEFKS 907 Score = 42.1 bits (97), Expect = 0.046, Method: Composition-based stats. Identities = 51/318 (16%), Positives = 82/318 (25%), Gaps = 89/318 (27%) Query: 12 HYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHY--------DSQHRLVHYTRTQYAE 63 YRYD GR+TE+ + ++ Y Y DS +R TQ Sbjct: 356 EIRYRYDSDGRVTEQLN---------PAGLSYTYQYEKDRITITDSLNR-REVLHTQGEA 405 Query: 64 P----------------LVESRYLYDPLG--RR--------------------------- 78 E+R+ Y+ G R Sbjct: 406 GLKRVVKNHPETEALLWQHETRHAYNAQGLANRCIPDSLPAVEWLTYGSGWLAGMKLGDT 465 Query: 79 -----VAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQPGSFTP 133 R+ R G LS T Y G +L + + + Y Sbjct: 466 PLVDFTRDRLHRETLRRFGRYELS-----TAYTPAG-QLQSQHLNSLQYDRDYTWNDNGE 519 Query: 134 LIRVETATGEL------------AKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLE 181 LIR+ + T +L + + G + P + + Sbjct: 520 LIRISSPRQTRSYSYSTTGRLTGVHTTAANLDIRILYATDPAGNRLPDPELHPDSTLSMW 579 Query: 182 SEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVS---T 238 + R + R+ LT + + T + H YH D + + Sbjct: 580 PDNRIARDAHYLYRYDRHGRLTEKTDLIPEGGIRTDDERTHWYHYDSQHRLVHYTRTQYA 639 Query: 239 EGATEWCAEYDEWGNLLN 256 E E YD G + Sbjct: 640 EPLVESRYLYDPLGRRVA 657 >UniRef50_P16919 Protein rhsD n=261 Tax=Bacteria RepID=RHSD_ECOLI Length = 1426 Score = 331 bits (849), Expect = 3e-89, Method: Composition-based stats. Identities = 261/339 (76%), Positives = 286/339 (84%) Query: 1 MWPDNRIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQ 60 +WPDNRIA DAHY+YR+D +GRLTEKTD IP GVIRTDDERTH YHYDSQHRLV YTR Q Sbjct: 934 VWPDNRIAEDAHYVYRHDEYGRLTEKTDRIPAGVIRTDDERTHHYHYDSQHRLVFYTRIQ 993 Query: 61 YAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRT 120 + EPLVESRYLYDPLGRR+AKRVWRRERDLTGWMSLSRKP+VTWYGWDGDRLTT+Q D T Sbjct: 994 HGEPLVESRYLYDPLGRRMAKRVWRRERDLTGWMSLSRKPEVTWYGWDGDRLTTVQTDTT 1053 Query: 121 RIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRL 180 RIQT+Y+PGSFTPLIRVET GE K QRRSLA+TLQQ G E+G VVFP LV++LDRL Sbjct: 1054 RIQTVYEPGSFTPLIRVETENGEREKAQRRSLAETLQQEGSENGHGVVFPAELVRLLDRL 1113 Query: 181 ESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEG 240 E EI ADRVS ESR WLA CGLTVEQ+ Q++P YTPARK HLYHCDHRGLPLAL+S +G Sbjct: 1114 EEEIRADRVSSESRAWLAQCGLTVEQLARQVEPEYTPARKAHLYHCDHRGLPLALISEDG 1173 Query: 241 ATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEESGLYYNRHRYYDPLQGRYITQDP 300 T W AEYDEWGN LNEENPH + Q RLPGQQ+DEESGLYYNRHRYYDPLQGRYITQDP Sbjct: 1174 NTAWSAEYDEWGNQLNEENPHHVYQPYRLPGQQHDEESGLYYNRHRYYDPLQGRYITQDP 1233 Query: 301 IGLKGGWNFYQYPLNPVQYIDSMGLASKYGHLNNGGYGA 339 +GLKGGWN YQYPLNP+Q ID MGL + +G Sbjct: 1234 MGLKGGWNLYQYPLNPLQQIDPMGLLQTWDDARSGACTG 1272 Score = 77.2 bits (188), Expect = 1e-12, Method: Composition-based stats. Identities = 51/309 (16%), Positives = 82/309 (26%), Gaps = 49/309 (15%) Query: 7 IARDAHYLYRYDRHGRLTEKTDLIPE-------------GVIRTDDERTHRYHYDSQHRL 53 +A + YD GRLT +TD I T D R +++Y+ ++L Sbjct: 419 LADGSVTRSGYDAAGRLTAQTDAAGRRTEYGLNVVSGDITDITTPDGRETKFYYNDGNQL 478 Query: 54 VHYTRTQYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWM---------SLSRKPQVTW 104 E E YD GR V++ E + + Sbjct: 479 TAVVSPDGLESRRE----YDEPGRLVSETSRSGETVRYRYDDAHSELPATTTDATGSTRQ 534 Query: 105 YGWDGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDG 164 W D + QT Y+ F + V G + + Sbjct: 535 MTWSRYGQLLAFTDCSGYQTRYEYDRFGQMTAVHREEGISLYRRYDNRGRLTS------- 587 Query: 165 GSVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTP-ARKIHL 223 V+ E+ + + + + Q V T Sbjct: 588 ---------VKDAQGRETRYEYNAAGDLTAVITPDGNRSETQYDAWGKAVSTTQGGLTRS 638 Query: 224 YHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRL--PGQQYDEE-SGL 280 D G ++L + G+ YD L+ + Q G+ E GL Sbjct: 639 MEYDAAGRVISLTNENGS-HSVFSYDALDRLVQQGGFDGRTQRYHYDLTGKLTQSEDEGL 697 Query: 281 YYNRHRYYD 289 YYD Sbjct: 698 VILW--YYD 704 Score = 64.4 bits (155), Expect = 9e-09, Method: Composition-based stats. Identities = 41/313 (13%), Positives = 75/313 (23%), Gaps = 66/313 (21%) Query: 9 RDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLV-------------- 54 + YD R RY YD R+V Sbjct: 334 NTQVRAFTYDA-------QHPGRMVAHRYAGRPEMRYRYDDTGRVVEQLNPAGLSYRYLY 386 Query: 55 --------------HYTRTQYAEP-----------LVESRYLYDPLGRRVAKRVWRRERD 89 T+ +R YD GR A+ R Sbjct: 387 EQDRITVTDSLNRREVLHTEGGAGLKRVVKKELADGSVTRSGYDAAGRLTAQTDAAGRRT 446 Query: 90 LTGWMSLS---------RKPQVTWYGWDGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETA 140 G +S + +Y DG++LT + + + L+ + Sbjct: 447 EYGLNVVSGDITDITTPDGRETKFYYNDGNQLTAVVSPDGLESRR-EYDEPGRLVSETSR 505 Query: 141 TGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQ---------MLDRLESEILADRVSE 191 +GE + + L + + GS + E Sbjct: 506 SGETVRYRYDDAHSELPATTTDATGSTRQMTWSRYGQLLAFTDCSGYQTRYEYDRFGQMT 565 Query: 192 ESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEW 251 R + ++ V + Y + G A+++ +G +YD W Sbjct: 566 AVHREEGISLYRRYDNRGRLTSVKDAQGRETRYEYNAAGDLTAVITPDGN-RSETQYDAW 624 Query: 252 GNLLNEENPHQLQ 264 G ++ + Sbjct: 625 GKAVSTTQGGLTR 637 Score = 59.8 bits (143), Expect = 2e-07, Method: Composition-based stats. Identities = 49/281 (17%), Positives = 76/281 (27%), Gaps = 41/281 (14%) Query: 13 YLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQ--HRLVHYTRTQYAEPLVESRY 70 Y Y G L D + + + YD+Q R+V + E RY Sbjct: 316 VRYTYTEAGELLAVYDRS--------NTQVRAFTYDAQHPGRMVAHRYAGRP----EMRY 363 Query: 71 LYDPLGRRVAKRVWRR--------ERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRI 122 YD GR V + + +T SL+R+ + G G + + Sbjct: 364 RYDDTGRVVEQLNPAGLSYRYLYEQDRITVTDSLNRREVLHTEGGAGLKRVVKKELADGS 423 Query: 123 QTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLES 182 T + L A G + ++ + DG F D + Sbjct: 424 VTRSGYDAAGRLTAQTDAAGRRTEYGLNVVSGDITDITTPDGRETKF-----YYNDGNQL 478 Query: 183 EILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIH----LYHCDHRGLPLALV-S 237 + ESRR G V + + V H D G + S Sbjct: 479 TAVVSPDGLESRREYDEPGRLVSETSRSGETVRYRYDDAHSELPATTTDATGSTRQMTWS 538 Query: 238 TEGATEW---------CAEYDEWGNLLNEENPHQLQQLIRL 269 G EYD +G + + R Sbjct: 539 RYGQLLAFTDCSGYQTRYEYDRFGQMTAVHREEGISLYRRY 579 Score = 51.3 bits (121), Expect = 8e-05, Method: Composition-based stats. Identities = 58/419 (13%), Positives = 110/419 (26%), Gaps = 53/419 (12%) Query: 43 HRYHYDSQHRLVHYT------RTQYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSL 96 Y D RL + RY Y G +A + Sbjct: 285 TEYGPDRGIRLSAVWLMHDPAYPESLPAAPLVRYTYTEAGELLA-----------VYDRS 333 Query: 97 SRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTL 156 + + + Y R + Y+ ++ G + D + Sbjct: 334 NTQVRAFTYDAQHPGRMVAHRYAGRPEMRYRYDDTGRVVEQLNPAG--LSYRYLYEQDRI 391 Query: 157 QQSGGEDGGSVVFPPVL--------VQMLDRLESEILADRVSEESRRWLASCGLTVEQM- 207 + + V+ ++ D + D + + A+ T + Sbjct: 392 TVTDSLNRREVLHTEGGAGLKRVVKKELADGSVTRSGYDAAGRLTAQTDAAGRRTEYGLN 451 Query: 208 ---QNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQ 264 + D R+ Y+ D A+VS +G E EYDE G L++E + Sbjct: 452 VVSGDITDITTPDGRETKFYYNDGN-QLTAVVSPDG-LESRREYDEPGRLVSETSRSGET 509 Query: 265 QLIRLPGQQYDEESGLYYNRHRYYDPLQGRYITQDPIGLKGGWNFYQYPLNPVQYIDSMG 324 R D S L P T D G + +Y + + D G Sbjct: 510 VRYRY----DDAHSEL---------PAT----TTDATGSTRQMTWSRY-GQLLAFTDCSG 551 Query: 325 LASKYGHLNNGGYGARPNKPPTPDPSKLPDIAKQLRLPYPIDQASSAP-NVFKTFFRALS 383 ++Y + G A + + + + + + + N ++ Sbjct: 552 YQTRYEYDRFGQMTAVHREEGISLYRRYDNRGRLTSVKDAQGRETRYEYNAAGDLTAVIT 611 Query: 384 PYDYTLYCRKWVKPNLTCTPQDDSQYPGMDTKTASDYLPQTNWPTTQLPPGYTCAEPYL 442 P + T Q M+ A + TN + Y + + Sbjct: 612 PDGNRSETQYDAWGKAVSTTQGGLTR-SMEYDAAGRVISLTNENGSHSVFSYDALDRLV 669 >UniRef50_UPI0001C341D4 protein RhsA n=1 Tax=Citrobacter youngae ATCC 29220 RepID=UPI0001C341D4 Length = 1365 Score = 314 bits (803), Expect = 7e-84, Method: Composition-based stats. Identities = 230/380 (60%), Positives = 269/380 (70%), Gaps = 3/380 (0%) Query: 1 MWPDNRIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQ 60 +W DNRI DA YLYRYDR+GRLTEKTD IP+G IR DERTHRY YD+QHRLVH RTQ Sbjct: 900 IWADNRITEDAQYLYRYDRYGRLTEKTDRIPDGAIRMYDERTHRYSYDNQHRLVHCVRTQ 959 Query: 61 YAEPLVESRYLYDPLGRRVAKRVWRRE--RDLTGWMSLSRKPQVTWYGWDGDRLTTIQND 118 + E E RY+YDP GRRV KRVW+RE +LS +P TWYGWDGDRLTT Q Sbjct: 960 HGETQAEGRYIYDPQGRRVGKRVWKREPVHWSDTRTALSHRPYTTWYGWDGDRLTTTQTA 1019 Query: 119 RTRIQTIYQPGSFTPLIRVETATGE-LAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQML 177 +TR+QTIY+PGSFTPLIRVETAT A + R+LA+ L+Q G DG VVFPP LV ML Sbjct: 1020 QTRVQTIYEPGSFTPLIRVETATEALDALRRHRTLAEKLRQEGSGDGAGVVFPPALVNML 1079 Query: 178 DRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVS 237 DRLE E+ A +S+ +R+WLA CGLT EQM QM+P+ P R +HLYHCDHRGLPLAL+S Sbjct: 1080 DRLEGELRAGVISDANRQWLAGCGLTPEQMAAQMEPLPVPERTLHLYHCDHRGLPLALIS 1139 Query: 238 TEGATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEESGLYYNRHRYYDPLQGRYIT 297 +GA W AEYDEWGN+L E+NPH LQQLIRLPGQQYD+ESGL+YNRHRYY+P GRYIT Sbjct: 1140 QDGAISWRAEYDEWGNVLREDNPHNLQQLIRLPGQQYDDESGLHYNRHRYYNPGLGRYIT 1199 Query: 298 QDPIGLKGGWNFYQYPLNPVQYIDSMGLASKYGHLNNGGYGARPNKPPTPDPSKLPDIAK 357 QDPIGLKGGWN Y+YPLNPV+YID GL + + + G R + + Sbjct: 1200 QDPIGLKGGWNLYKYPLNPVEYIDPSGLDVRLVNTDAVGGWHRKVEVDEGTGTYGISFGV 1259 Query: 358 QLRLPYPIDQASSAPNVFKT 377 P S P+V K Sbjct: 1260 YTADPDIWGNVSGTPDVGKA 1279 Score = 73.7 bits (179), Expect = 1e-11, Method: Composition-based stats. Identities = 38/266 (14%), Positives = 61/266 (22%), Gaps = 34/266 (12%) Query: 18 DRHGRLTEKTDLIPEGVIRT---DDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYLYDP 74 D GR TE I G + D R ++Y+ +L T + + YD Sbjct: 414 DAAGRKTEYRYSIASGNVTEIISPDGRKTAFYYNGGRQLTSVTHPDG----LREKLAYDE 469 Query: 75 LGRRVAKRVWRRERDLTGWMSLS---------RKPQVTWYGWDGDRLTTIQNDRTRIQTI 125 GR A+ + + W +D + +T Sbjct: 470 QGRLTAQTSRQGSTTRYVYADPHSEYPCAREDATGSKKQMTWSHYGQLLSVSDCSGYETR 529 Query: 126 YQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEIL 185 Y+ F L + G + + Q + Sbjct: 530 YEYDRFGQLTAMHQEEGLSRYRAYDTRGRPVSQHDAAGRETYYEYSE------------- 576 Query: 186 ADRVSEESRRWLASCGLTVEQMQNQMDPVY-TPARKIHLYHCDHRGLPLALVSTEGATEW 244 + + T Q PV T D G L + G+ Sbjct: 577 ---AGDLTAVIAPDGSRTETQHDAGGRPVSITAGGLTRQITYDAAGRVTQLTNENGSHT- 632 Query: 245 CAEYDEWGNLLNEENPHQLQQLIRLP 270 YD L + Q Sbjct: 633 EFTYDALDRLTQQTGFDGRTQRYGYN 658 Score = 62.9 bits (151), Expect = 3e-08, Method: Composition-based stats. Identities = 36/216 (16%), Positives = 62/216 (28%), Gaps = 20/216 (9%) Query: 12 HYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYL 71 Y YDR G+LT R YD++ R V Q+ E+ Y Sbjct: 527 ETRYEYDRFGQLTAMHQEEGLSRYR---------AYDTRGRPVS----QHDAAGRETYYE 573 Query: 72 YDPLGRRVAKRVWRRERDLTGWM------SLSRKPQVTWYGWDGDRLTTIQNDRTRIQTI 125 Y G A R T S++ +D T + T Sbjct: 574 YSEAGDLTAVIAPDGSRTETQHDAGGRPVSITAGGLTRQITYDAAGRVTQLTNENGSHTE 633 Query: 126 YQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEIL 185 + + L + G + + L +S ED ++ ++ R + Sbjct: 634 FTYDALDRLTQQTGFDGRTQRYGY-NTGGQLVRSEDEDLVTLWHYDDADRLTHRTVNGEP 692 Query: 186 ADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKI 221 A++ WL E + + Y ++ Sbjct: 693 AEQWQYNDHGWLTGISHLSEGHRVAVHYGYDEKGRL 728 Score = 49.0 bits (115), Expect = 3e-04, Method: Composition-based stats. Identities = 55/352 (15%), Positives = 94/352 (26%), Gaps = 86/352 (24%) Query: 3 PDNRIAR-----DAHYLYRYDRHGRLTEKT-----------DLIPEGVIRTDDERTHRYH 46 R+ + +H + YD RLT++T + + V D++ +H Sbjct: 617 AAGRVTQLTNENGSHTEFTYDALDRLTQQTGFDGRTQRYGYNTGGQLVRSEDEDLVTLWH 676 Query: 47 YDSQHRLVHYTRTQYA--------------------EPLVESRYLYDPLGRRVAKRVWRR 86 YD RL H T V Y YD GR ++++ Sbjct: 677 YDDADRLTHRTVNGEPAEQWQYNDHGWLTGISHLSEGHRVAVHYGYDEKGRLLSEKQTVH 736 Query: 87 ERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAK 146 + +T + + +D GS L V+ L Sbjct: 737 APQTQTLLWEH----LTQHDYQNGLANKTTHDHLPPVAWLTYGS-GWLAGVKLGDTPLID 791 Query: 147 TQRRSLADTLQQSGGEDGGSVVFPPVL-------------VQMLDRLESEILADRVSEES 193 R L Q+ GE + + + ++ Sbjct: 792 FTRDRLHRETQRCFGEYTLATGYSAAGQLLSRHLNSPLLNRDYGYDGAGHLTRISTPHQT 851 Query: 194 RRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRG----LPLALVSTEGATEWC---- 245 R + S + ++ D + Y D G P + W Sbjct: 852 REYGYSQTGRLTGVRMIADGLDIRLP----YATDPAGNRLPDPEFYPDSS-RKIWADNRI 906 Query: 246 -------AEYDEWGNLLNEENPHQLQQLIRLPGQQYDEESGLYYNRHRY-YD 289 YD +G L + + + + YDE + HRY YD Sbjct: 907 TEDAQYLYRYDRYGRLTEKTDRIPDGAI-----RMYDERT------HRYSYD 947 Score = 44.8 bits (104), Expect = 0.007, Method: Composition-based stats. Identities = 64/442 (14%), Positives = 106/442 (23%), Gaps = 79/442 (17%) Query: 44 RYHYDSQHRLVHYTRTQYAEPLVESRYLYDPL--GRRVAKRVWRRERDLTGWMSLSRKPQ 101 RY Y + L + R+ YD GR VA + R + Sbjct: 291 RYAYSPRGELAAVYDR---GGVQVRRFDYDAETPGRMVAHQYAGRPQ------------- 334 Query: 102 VTWYGWDGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGG 161 T Y +D Q + + Y+ I E+ T + + Sbjct: 335 -TSYRYDAAGRVVEQLNPAGLSYRYEYQRDHVAITDSLHRREVLHTAGEGGLKRVVKKEY 393 Query: 162 EDGGSVVFPP------VLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQM---D 212 DG ++E S ++ G N Sbjct: 394 ADGSVTCSEYNPAGWLTARTDAAGRKTEYRYSIASGNVTEIISPDGRKTAFYYNGGRQLT 453 Query: 213 PVYTPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDE---------------------- 250 V P D +G A S +G+T D Sbjct: 454 SVTHPDGLREKLAYDEQGRLTAQTSRQGSTTRYVYADPHSEYPCAREDATGSKKQMTWSH 513 Query: 251 WGNLLNEENPHQLQQLIRLP--GQQ--YDEESGLYYNRHRYYDPLQGRYITQDPIGLKGG 306 +G LL+ + + GQ +E GL R+R YD GR Sbjct: 514 YGQLLSVSDCSGYETRYEYDRFGQLTAMHQEEGLS--RYRAYDTR-GR------------ 558 Query: 307 WNFYQYPLNPVQYIDSMGLASKYGHLNNGGYGARPNKPPTPDPSKLPDIAKQLRLPYPID 366 PV D+ G + Y + G A + ++ + + + Sbjct: 559 ---------PVSQHDAAGRETYYEYSEAGDLTAVIAPDGSRTETQHDAGGRPVSITAGGL 609 Query: 367 QASSAPNVFKTFFRALSPYDYTLYCRKWVKPNLTCTPQDDSQYPGMDTKTASDYLPQTNW 426 + + + LT D + T + + Sbjct: 610 TRQITYDAAGRVTQLTNENGSHTEFTYDALDRLTQQTGFDGRTQRYGYNTGGQLVRSEDE 669 Query: 427 PTTQLPPGYTCAEPYLFPDINK 448 L Y A+ +N Sbjct: 670 DLVTL-WHYDDADRLTHRTVNG 690 >UniRef50_UPI0001B52C8C protein, rhs-like protein n=4 Tax=Enterobacteriaceae RepID=UPI0001B52C8C Length = 243 Score = 310 bits (795), Expect = 6e-83, Method: Composition-based stats. Identities = 243/243 (100%), Positives = 243/243 (100%) Query: 235 LVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEESGLYYNRHRYYDPLQGR 294 LVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEESGLYYNRHRYYDPLQGR Sbjct: 1 LVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEESGLYYNRHRYYDPLQGR 60 Query: 295 YITQDPIGLKGGWNFYQYPLNPVQYIDSMGLASKYGHLNNGGYGARPNKPPTPDPSKLPD 354 YITQDPIGLKGGWNFYQYPLNPVQYIDSMGLASKYGHLNNGGYGARPNKPPTPDPSKLPD Sbjct: 61 YITQDPIGLKGGWNFYQYPLNPVQYIDSMGLASKYGHLNNGGYGARPNKPPTPDPSKLPD 120 Query: 355 IAKQLRLPYPIDQASSAPNVFKTFFRALSPYDYTLYCRKWVKPNLTCTPQDDSQYPGMDT 414 IAKQLRLPYPIDQASSAPNVFKTFFRALSPYDYTLYCRKWVKPNLTCTPQDDSQYPGMDT Sbjct: 121 IAKQLRLPYPIDQASSAPNVFKTFFRALSPYDYTLYCRKWVKPNLTCTPQDDSQYPGMDT 180 Query: 415 KTASDYLPQTNWPTTQLPPGYTCAEPYLFPDINKPDGPATAGIDDLGEILAKMKQRTSRG 474 KTASDYLPQTNWPTTQLPPGYTCAEPYLFPDINKPDGPATAGIDDLGEILAKMKQRTSRG Sbjct: 181 KTASDYLPQTNWPTTQLPPGYTCAEPYLFPDINKPDGPATAGIDDLGEILAKMKQRTSRG 240 Query: 475 IRK 477 IRK Sbjct: 241 IRK 243 >UniRef50_C1M8X5 Core protein n=2 Tax=Citrobacter RepID=C1M8X5_9ENTR Length = 1359 Score = 308 bits (788), Expect = 3e-82, Method: Composition-based stats. Identities = 222/341 (65%), Positives = 259/341 (75%), Gaps = 3/341 (0%) Query: 1 MWPDNRIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQ 60 +W DNRI DA YLYRYDR+GRLTEKTD IP+G IR DERTHRY YD+QHRLVHY RTQ Sbjct: 901 VWADNRITEDAQYLYRYDRYGRLTEKTDRIPDGAIRMYDERTHRYSYDNQHRLVHYLRTQ 960 Query: 61 YAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMS--LSRKPQVTWYGWDGDRLTTIQND 118 Y + E RYLYDPLGRR+ K++W+RER+ LS +P TWYGWDGDRLTT Q Sbjct: 961 YGKKQAEGRYLYDPLGRRIGKQMWKREREHPDHDQMALSHRPYTTWYGWDGDRLTTTQTA 1020 Query: 119 RTRIQTIYQPGSFTPLIRVETATGE-LAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQML 177 + R+QTIY+PGSFTPLIRVETAT A + R+LA+ L+Q G EDG VVFPP LVQML Sbjct: 1021 QRRVQTIYEPGSFTPLIRVETATEALDALRRHRTLAEKLRQEGSEDGAGVVFPPALVQML 1080 Query: 178 DRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVS 237 DRLE E+ A +S+E+R+WLA CGLT EQM QM+P+ P R ++LYHCDHRGLPLAL+ Sbjct: 1081 DRLEGEMRAGVISDENRQWLAGCGLTPEQMVAQMEPLPVPERTLYLYHCDHRGLPLALIR 1140 Query: 238 TEGATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEESGLYYNRHRYYDPLQGRYIT 297 +GA W AEYDEWGN+L E+NPH LQQLIRLPGQQYD+ESGL+YNRHRYY+P GRYIT Sbjct: 1141 QDGAISWRAEYDEWGNVLREDNPHNLQQLIRLPGQQYDDESGLHYNRHRYYNPGLGRYIT 1200 Query: 298 QDPIGLKGGWNFYQYPLNPVQYIDSMGLASKYGHLNNGGYG 338 QDPIGL GG N YQYPLNPV +D +GL + G Sbjct: 1201 QDPIGLAGGLNPYQYPLNPVTEVDPLGLWAFAIPAILEGIN 1241 Score = 73.3 bits (178), Expect = 2e-11, Method: Composition-based stats. Identities = 46/288 (15%), Positives = 68/288 (23%), Gaps = 39/288 (13%) Query: 18 DRHGRLTEKTDLIPEGVIRT---DDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYLYDP 74 D GR TE I G + D R ++Y+ +L E YD Sbjct: 414 DAAGRKTEYRYSIASGNVTEIISPDGRKTVFYYNGGRQLTSVIHPDGLREKRE----YDE 469 Query: 75 LGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDG---------DRLTTIQNDRTRIQTI 125 GR A+ + + + T G D + +T Sbjct: 470 HGRLTAQTSRQGNTTRYVYADPHSESPCTSEDATGSKKQMTWSRHGQLLSFTDCSGYETR 529 Query: 126 YQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEIL 185 Y F + + G + + Q + Sbjct: 530 YDYDRFGQVTAIHQEDGLSQYRAYDTRGRLVSQRDAAGRETRYEYSD------------- 576 Query: 186 ADRVSEESRRWLASCGLTVEQMQNQMDPVY-TPARKIHLYHCDHRGLPLALVSTEGATEW 244 + + T Q PV T D G L + G+ Sbjct: 577 ---AGDLTTVIAPDSSRTETQYDAGGRPVSITAGGLTRRMQYDAAGRVTQLTNENGSHT- 632 Query: 245 CAEYDEWGNLLNEENPHQLQQLIRL-PGQQ--YDEESGLYYNRHRYYD 289 YD L + Q G Q E+ GL H YD Sbjct: 633 SFTYDLLDRLTQQTGFDGRTQRYGYNTGGQLVRSEDEGLVTLWH--YD 678 Score = 66.8 bits (161), Expect = 2e-09, Method: Composition-based stats. Identities = 37/216 (17%), Positives = 63/216 (29%), Gaps = 20/216 (9%) Query: 12 HYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYL 71 Y YDR G++T R YD++ RLV Q E+RY Sbjct: 527 ETRYDYDRFGQVTAIHQEDGLSQYR---------AYDTRGRLVS----QRDAAGRETRYE 573 Query: 72 YDPLGRRVAKRVWRRERDLTGWM------SLSRKPQVTWYGWDGDRLTTIQNDRTRIQTI 125 Y G R T + S++ +D T + T Sbjct: 574 YSDAGDLTTVIAPDSSRTETQYDAGGRPVSITAGGLTRRMQYDAAGRVTQLTNENGSHTS 633 Query: 126 YQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEIL 185 + L + G + + L +S E ++ ++ R + Sbjct: 634 FTYDLLDRLTQQTGFDGRTQRYGY-NTGGQLVRSEDEGLVTLWHYDESDRLTHRTVNGEP 692 Query: 186 ADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKI 221 A++ R WLA E + + Y ++ Sbjct: 693 AEQWQYNERGWLAEISHLSEGHRVTVHYGYDEKGRL 728 Score = 60.2 bits (144), Expect = 2e-07, Method: Composition-based stats. Identities = 45/307 (14%), Positives = 77/307 (25%), Gaps = 53/307 (17%) Query: 12 HYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHR-----------LVHYTRTQ 60 YRYD GR+ E+ + + DS HR L + + Sbjct: 334 QTTYRYDAAGRVVEQYNPAGLSYRYEYGKNAVTIT-DSLHRREVLHTAGEGGLKRVVKKE 392 Query: 61 YAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRK--------PQVTWYGWDGDRL 112 YA+ V Y+P+G A+ + + S + T + ++G R Sbjct: 393 YADGSVTCS-EYNPVGWLTAQTDAAGRKTEYRYSIASGNVTEIISPDGRKTVFYYNGGRQ 451 Query: 113 TTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQR----------------------R 150 T ++ + L + G + Sbjct: 452 LTSVIHPDGLREKREYDEHGRLTAQTSRQGNTTRYVYADPHSESPCTSEDATGSKKQMTW 511 Query: 151 SLADTLQQSGGEDGGSVVFPPVLV------QMLDRLESEILADRVSEESRRWLASCGLTV 204 S L G + D L D + A+ T Sbjct: 512 SRHGQLLSFTDCSGYETRYDYDRFGQVTAIHQEDGLSQYRAYDTRGRLVSQRDAAGRETR 571 Query: 205 EQMQNQMD--PVYTPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQ 262 + + D V P D G P+++ G +YD G + N + Sbjct: 572 YEYSDAGDLTTVIAPDSSRTETQYDAGGRPVSIT--AGGLTRRMQYDAAGRVTQLTNENG 629 Query: 263 LQQLIRL 269 Sbjct: 630 SHTSFTY 636 Score = 54.0 bits (128), Expect = 1e-05, Method: Composition-based stats. Identities = 27/147 (18%), Positives = 41/147 (27%), Gaps = 26/147 (17%) Query: 3 PDNR----IARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTR 58 R A +YD GR+T+ T+ ++ + YD RL T Sbjct: 597 AGGRPVSITAGGLTRRMQYDAAGRVTQLTN---------ENGSHTSFTYDLLDRLTQQTG 647 Query: 59 TQYAEPLVESRYLYDPLGRRVAKR--------VWRRERDLTGWMSLSRKPQVTWYGWDGD 110 RY Y+ G+ V + LT + Y G Sbjct: 648 FDG----RTQRYGYNTGGQLVRSEDEGLVTLWHYDESDRLTHRTVNGEPAEQWQYNERGW 703 Query: 111 RLTTIQ-NDRTRIQTIYQPGSFTPLIR 136 ++ R+ Y LIR Sbjct: 704 LAEISHLSEGHRVTVHYGYDEKGRLIR 730 Score = 46.7 bits (109), Expect = 0.002, Method: Composition-based stats. Identities = 42/246 (17%), Positives = 63/246 (25%), Gaps = 38/246 (15%) Query: 30 IPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYLYDPL--GRRVAKRVWRRE 87 PE RY Y + L + R+ YD GR VA + R Sbjct: 277 DPEYPDNLPTSPLVRYDYSPRGELAAVYDR---GGVQVRRFDYDADTPGRMVAHQYAGRP 333 Query: 88 RDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKT 147 + T Y +D Q + + Y+ G I E+ T Sbjct: 334 Q--------------TTYRYDAAGRVVEQYNPAGLSYRYEYGKNAVTITDSLHRREVLHT 379 Query: 148 QRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQM 207 + + DG V L ++ A E R +AS +T Sbjct: 380 AGEGGLKRVVKKEYADGSVTCSEYNPV---GWLTAQTDAAGRKTEYRYSIASGNVTEIIS 436 Query: 208 QNQMDPVYTPARK---IHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQ 264 + V+ + H D EYDE G L + + Sbjct: 437 PDGRKTVFYYNGGRQLTSVIHPDGL-------------REKREYDEHGRLTAQTSRQGNT 483 Query: 265 QLIRLP 270 Sbjct: 484 TRYVYA 489 >UniRef50_B5PJT7 Protein RhsD n=2 Tax=Enterobacteriaceae RepID=B5PJT7_SALET Length = 429 Score = 249 bits (636), Expect = 2e-64, Method: Composition-based stats. Identities = 189/348 (54%), Positives = 219/348 (62%), Gaps = 10/348 (2%) Query: 58 RTQYAEPLVESRYLYDPLGRRVAKRVWRRE--RDLTGWMSLSRKPQVTWYGWDGDRLTTI 115 R Q+ E RYLYDPLGRRV KRVW+RE M LSR+P VTWYGW+GDRLTTI Sbjct: 2 RIQHNTIQAEGRYLYDPLGRRVGKRVWKRELVHWSNTRMELSRRPYVTWYGWEGDRLTTI 61 Query: 116 QNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQ 175 Q ++RIQT+Y PGSFTPL+R+ET E AK Q RSLA+ L Q G EDG +V P L Sbjct: 62 QTGQSRIQTVYAPGSFTPLVRIETDAAEQAKAQHRSLAEKLSQEGSEDGQAVQLPAALTA 121 Query: 176 MLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLAL 235 MLDRLE E+ + VSEESR WLA CGLT EQM Q++P YTP RKIHLYHCD RGLPLAL Sbjct: 122 MLDRLEGELRRNAVSEESRAWLAGCGLTPEQMAGQLEPEYTPQRKIHLYHCDQRGLPLAL 181 Query: 236 VSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEESGLYYNRHRYYDPLQGRY 295 ++ + W EYDEWGNL EENP L+Q+IRLPGQQYDEESGLYYNRHRYY+P QGRY Sbjct: 182 ITPDNTVAWRGEYDEWGNLSGEENPAHLEQVIRLPGQQYDEESGLYYNRHRYYNPGQGRY 241 Query: 296 ITQDPIGLKGGWNFYQYPLNPVQYIDSMGLASKYGHLNNGGYGARPNKPPTPDPSKLPDI 355 ITQDPIGL+GGWN Y YPLNPV ID +GL+ + N D Sbjct: 242 ITQDPIGLRGGWNLYNYPLNPVSEIDPLGLSMWDDAKSGSCTDGFCNALSFIIGPSKFDS 301 Query: 356 AKQLRLPYPIDQASSAPNVFKTFFRALSPYDYTLYCRKWVKPNLTCTP 403 + L N+ + + Y L C+ TP Sbjct: 302 EEDAALDA-------LKNINNQSICSGTEYGG-LICKDVKNKYFATTP 341 >UniRef50_Q2SPP2 Rhs family protein n=3 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SPP2_HAHCH Length = 1434 Score = 248 bits (633), Expect = 3e-64, Method: Composition-based stats. Identities = 86/367 (23%), Positives = 139/367 (37%), Gaps = 34/367 (9%) Query: 8 ARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVE 67 + Y+YD HG L DL + RYHYD+ RL E Sbjct: 931 TQLIDRRYQYDHHGNLALIDDL---------QKGATRYHYDALDRLKQV------ESYCN 975 Query: 68 SRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQ 127 ++ +DP G ++ + Y G+ + + +++T Y Sbjct: 976 EQFDFDPAGNILSDTQSGVSHTKKANRLDFYGDRHFDYDDAGNLVRERRGKGGKLETRYV 1035 Query: 128 PGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILAD 187 L+ VE G+ + + +L + + ++ ++ R Sbjct: 1036 YNKQNQLVAVE-KDGQRTEYRYDALGRRISKQDAFGQTEFLWNGDVLLSEQRQ------- 1087 Query: 188 RVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWCAE 247 + ++ + K++ YH DH G P + +EG W A Sbjct: 1088 ---HLRKVYVYEPDTFRPLA-------FIQDEKVYHYHLDHLGTPQEMTDSEGTLVWSAR 1137 Query: 248 YDEWGNLLNEENPHQLQQLIRLPGQQYDEESGLYYNRHRYYDPLQGRYITQDPIGLKGGW 307 Y +G L + + + +R GQ YDEE+G +YNRHRYYDP GR+I QDPIGL GG Sbjct: 1138 YKAYGALALQ-DVESVHNPLRFQGQYYDEETGFHYNRHRYYDPQSGRFINQDPIGLLGGA 1196 Query: 308 NFYQYPLNPVQYIDSMGLASKYGHLNNGGYGARPNKPPTPDPSKLPDIAKQLRLPYPIDQ 367 N YQY NPV ++D GL +K G + + + ++ LR + Sbjct: 1197 NAYQYAPNPVGWVDPFGLTAKPGDCPPTSPALKDSVYSAENIAQRAAEFNYLRELDIKNN 1256 Query: 368 ASSAPNV 374 A + Sbjct: 1257 AMLSAQQ 1263 Score = 91.0 bits (224), Expect = 9e-17, Method: Composition-based stats. Identities = 43/271 (15%), Positives = 77/271 (28%), Gaps = 51/271 (18%) Query: 5 NRIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEP 64 NR+ + YD G L + RY Y+ Q++LV + Sbjct: 1001 NRLDFYGDRHFDYDDAGNLVR-------ERRGKGGKLETRYVYNKQNQLVAVE-----KD 1048 Query: 65 LVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQT 124 + Y YD LGRR++K+ T + W+GD L + Q R Sbjct: 1049 GQRTEYRYDALGRRISKQ---------------DAFGQTEFLWNGDVLLSEQRQHLRKVY 1093 Query: 125 IYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEI 184 +Y+P +F PL + + Q + G++V+ ++ Sbjct: 1094 VYEPDTFRPLAFI----QDEKVYHYHLDHLGTPQEMTDSEGTLVWSARYKAYGALALQDV 1149 Query: 185 LADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEW 244 + + +++ + + D GL Sbjct: 1150 ESVHNPLRFQGQYYDEETGFHYNRHRYYDPQSG----RFINQDPIGLLGG--------AN 1197 Query: 245 CAEYDEWGNLLNEENPHQLQQLIRLPGQQYD 275 +Y NP L + D Sbjct: 1198 AYQYAP--------NPVGWVDPFGLTAKPGD 1220 Score = 73.7 bits (179), Expect = 1e-11, Method: Composition-based stats. Identities = 35/254 (13%), Positives = 65/254 (25%), Gaps = 27/254 (10%) Query: 9 RDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVES 68 Y YD G++ ++ D + R Y+ +L+ + + + Sbjct: 481 NGGKTTYYYDHRGKIIKEID---------PEGGVTRMAYNKNGQLIEHIDPEGG----VT 527 Query: 69 RYLYDPLGRRVAKRVWRRERDLTGWM-------SLSRKPQVTWYGWDGDRLTTIQNDRTR 121 RY+YD G + ++ ++G L T D Sbjct: 528 RYVYDEQGLLTQLTDAAGATYKIRYNHRGQPVEMINPLGHSWRREYNGKGLLTCVTDPLG 587 Query: 122 IQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVL----VQML 177 QT Y + A G ++A + +S + V Sbjct: 588 NQTRYAYNERGLPQTITDAAGNEKTFVWNAMAQLVSESVNGRRTEYLLNEDGDIGAVVDA 647 Query: 178 DRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPV--YTPARKIHLYHCDHRGLPLAL 235 D+ +E D + +R + A + Y D Sbjct: 648 DQRTTEYEYDLLGNVTRVQHLDGSAVQLRYNANSQLTHFIDAAGRCTEYLYDGLSQVRKK 707 Query: 236 VSTEGATEWCAEYD 249 + G YD Sbjct: 708 IDANGQVF-EYLYD 720 Score = 71.8 bits (174), Expect = 6e-11, Method: Composition-based stats. Identities = 39/281 (13%), Positives = 82/281 (29%), Gaps = 50/281 (17%) Query: 9 RDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVES 68 + + D GRL EK D ++HYD+ RL + P + Sbjct: 782 QANTTRFSRDPLGRLREKHS---------PDGEVSQFHYDAAGRLTEAS-----NPHRQL 827 Query: 69 RYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQP 128 R+ Y+ LG+ +R + V + +D L T + + Sbjct: 828 RFAYNALGQLTEERQDQH---------------VLRHDYDPLGLRTQTQLADGTRLNFAY 872 Query: 129 GSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADR 188 L + R + + G + + R+ E + Sbjct: 873 DQHGLFSEARYNDHLLTQITRDEQGREIARQQGALQSQYEYDLMGRLSRHRVSHEATKTQ 932 Query: 189 VSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWCAEY 248 + + ++ L + +D + A + H D + + ++ Sbjct: 933 LIDRRYQYDHHGNLAL------IDDLQKGATRYHYDALDRLKQVESYCNE------QFDF 980 Query: 249 DEWGNLLNEENPHQLQQLIRLPGQQYDEESGLYYNRHRYYD 289 D GN+L++ + + L + R++D Sbjct: 981 DPAGNILSDTQSGVSHTK---------KANRLDFYGDRHFD 1012 Score = 69.8 bits (169), Expect = 2e-10, Method: Composition-based stats. Identities = 60/340 (17%), Positives = 98/340 (28%), Gaps = 67/340 (19%) Query: 9 RDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDER------------THRYHYDSQHRLVHY 56 Y YD G LT+ TD + R + R Y+ + L Sbjct: 523 EGGVTRYVYDEQGLLTQLTDAAGATYKIRYNHRGQPVEMINPLGHSWRREYNGKGLLTCV 582 Query: 57 TRTQYAEPLVESRYLY----------DPLGR-----------RVAKRVWRRERDLTGWMS 95 T ++RY Y D G V++ V R + Sbjct: 583 TDPLGN----QTRYAYNERGLPQTITDAAGNEKTFVWNAMAQLVSESVNGRRTEYLLNED 638 Query: 96 ------LSRKPQVTWYGWD--GDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKT 147 + + T Y +D G+ D + +Q Y S L A G + Sbjct: 639 GDIGAVVDADQRTTEYEYDLLGNVTRVQHLDGSAVQLRYNANS--QLTHFIDAAGRCTEY 696 Query: 148 QRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESE---------------ILADRVSEE 192 L+ +++ +G + + L L +E I Sbjct: 697 LYDGLSQ-VRKKIDANGQVFEYLYDKERNLIGLINEKGERYKLGYDRNERLIREIGFDGR 755 Query: 193 SRRWLAS-CGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEW 251 + + + G + ++ + + + D G S +G YD Sbjct: 756 MQEYQYNRAGHLIAHLEGAHLDIPSEQANTTRFSRDPLGRLREKHSPDGE-VSQFHYDAA 814 Query: 252 GNLLNEENPH-QLQQLIRLPGQQYDEESGLYYNRHRYYDP 290 G L NPH QL+ GQ +E + RH YDP Sbjct: 815 GRLTEASNPHRQLRFAYNALGQLTEERQDQHVLRH-DYDP 853 Score = 64.1 bits (154), Expect = 1e-08, Method: Composition-based stats. Identities = 39/279 (13%), Positives = 70/279 (25%), Gaps = 38/279 (13%) Query: 8 ARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDD------------ERTHRYHYDSQHRLVH 55 A Y YD G +T L V + R Y YD ++ Sbjct: 647 ADQRTTEYEYDLLGNVTRVQHLDGSAVQLRYNANSQLTHFIDAAGRCTEYLYDGLSQV-- 704 Query: 56 YTRTQYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWM---------SLSRKPQVTWYG 106 R + YLYD + + ER G+ + Q Y Sbjct: 705 --RKKIDANGQVFEYLYDKERNLIGLINEKGERYKLGYDRNERLIREIGFDGRMQEYQYN 762 Query: 107 WDGDRLTTIQNDR------TRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSG 160 G + ++ T + L + GE+++ + + S Sbjct: 763 RAGHLIAHLEGAHLDIPSEQANTTRFSRDPLGRLREKHSPDGEVSQFHYDAAGRLTEASN 822 Query: 161 GEDGGSVVFP-----PVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVY 215 + Q L + + +++ + Sbjct: 823 PHRQLRFAYNALGQLTEERQDQHVLRHDYDPLGLRTQTQLADGTRLNFAYDQHGLFSEAR 882 Query: 216 TPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNL 254 + D +G + +GA + EYD G L Sbjct: 883 YNDHLLTQITRDEQG--REIARQQGALQSQYEYDLMGRL 919 Score = 61.7 bits (148), Expect = 6e-08, Method: Composition-based stats. Identities = 35/272 (12%), Positives = 72/272 (26%), Gaps = 48/272 (17%) Query: 12 HYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYL 71 Y + +D + Y+YD + +++ + +R Sbjct: 463 DYRFEWD---------TQNKVSHAFDSNGGKTTYYYDHRGKIIKEIDPEGG----VTRMA 509 Query: 72 YDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQPGSF 131 Y+ G+ + + + VT Y +D L T D + Sbjct: 510 YNKNGQLIEH--------------IDPEGGVTRYVYDEQGLLTQLTDAAGATYKIRYNHR 555 Query: 132 TPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSE 191 + + G + + G+ + V P+ Q L +++ Sbjct: 556 GQPVEMINPLGHSWRREYN----------GKGLLTCVTDPLGNQTRYAYNERGLPQTITD 605 Query: 192 ESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEW 251 A T + + Y + G A+V + EYD Sbjct: 606 -----AAGNEKTFVWNAMAQLVSESVNGRRTEYLLNEDGDIGAVVDAD-QRTTEYEYDLL 659 Query: 252 GNLLNEENPHQLQQLIRLPGQQYDEESGLYYN 283 GN+ ++ +R S L + Sbjct: 660 GNVTRVQHLDGSAVQLRYN-----ANSQLTHF 686 Score = 61.4 bits (147), Expect = 8e-08, Method: Composition-based stats. Identities = 54/398 (13%), Positives = 95/398 (23%), Gaps = 51/398 (12%) Query: 73 DPLGRRVAKRVWRRERDLTGWMSLSRKPQVTW----YGWDGDR---LTTIQNDRTRIQTI 125 D LG R+ W+ +++ + + G + N Sbjct: 340 DALGNRIDIAYWQDVEGYAHPITILQANWGPRLHILHNAQGLMCEIQSIQSNGAFATLAS 399 Query: 126 YQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEIL 185 Y LIR G R+ + + + G S F + + Sbjct: 400 YDYDEQQDLIRAADRAGASESYAYRNHI--ITRRTLKTGFSFYFEWSQYSPSGKCLRQWG 457 Query: 186 ADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGAT--- 242 + + W ++ N + Y DHRG + + EG Sbjct: 458 DRGIYDYRFEWDTQNKVSHAFDSNGGK-------TTYYY--DHRGKIIKEIDPEGGVTRM 508 Query: 243 -----------------EWCAEYDEWGNLLNEENPHQLQQLIRLP--GQQYDEESGLYYN 283 YDE G L + IR GQ + + L ++ Sbjct: 509 AYNKNGQLIEHIDPEGGVTRYVYDEQGLLTQLTDAAGATYKIRYNHRGQPVEMINPLGHS 568 Query: 284 RHRYYDPLQGRYITQ-DPIGLKGGWNFYQYPLN----PVQYIDSMGLASKYGHLNNGGYG 338 R Y+ +G DP+G N +Y N P D+ G + Sbjct: 569 WRREYN-GKGLLTCVTDPLG-----NQTRYAYNERGLPQTITDAAGNEKTFVWNAMAQLV 622 Query: 339 ARPNKPPTPDPSKLPDIAKQLRLPYPIDQASSAPNVFKTFFRALSPYDYTLYCRKWVKPN 398 + + D + ++ R + R Sbjct: 623 SESVNGRRTEYLLNEDGDIGAVVDADQRTTEYEYDLLGNVTRVQHLDGSAVQLRYNANSQ 682 Query: 399 LTCTPQDDSQYPGMDTKTASDYLPQTNWPTTQLPPGYT 436 LT + S + + Y Sbjct: 683 LTHFIDAAGRCTEYLYDGLSQVRKKIDANGQVFEYLYD 720 Score = 51.3 bits (121), Expect = 7e-05, Method: Composition-based stats. Identities = 30/216 (13%), Positives = 54/216 (25%), Gaps = 23/216 (10%) Query: 44 RYHYDSQHRLVHYTRTQYAEPLVESRYLYDPLG---RRVAKRVWRRERDLTGWMSLS--- 97 Y YD Q L+ A Y Y RR K + + + + Sbjct: 399 SYDYDEQQDLIRAADRAGAS----ESYAY-RNHIITRRTLKTGFSFYFEWSQYSPSGKCL 453 Query: 98 -----RKPQVTWYGWDGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSL 152 R + WD + D +T Y +I+ G + + Sbjct: 454 RQWGDRGIYDYRFEWDTQNKVSHAFDSNGGKTTYYYDHRGKIIKEIDPEGGVTRMAYNKN 513 Query: 153 ADTLQQSGGEDG-GSVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQM 211 ++ E G V+ + + + + + + Sbjct: 514 GQLIEHIDPEGGVTRYVYDEQGLLTQLTDAAGATYKIRYNHRGQPVEMINPLGHSWRREY 573 Query: 212 DP------VYTPARKIHLYHCDHRGLPLALVSTEGA 241 + V P Y + RGLP + G Sbjct: 574 NGKGLLTCVTDPLGNQTRYAYNERGLPQTITDAAGN 609 >UniRef50_C3JXH8 Putative Rhs protein n=1 Tax=Pseudomonas fluorescens SBW25 RepID=C3JXH8_PSEFS Length = 1597 Score = 247 bits (631), Expect = 6e-64, Method: Composition-based stats. Identities = 105/462 (22%), Positives = 164/462 (35%), Gaps = 39/462 (8%) Query: 12 HYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYL 71 Y YD+ G LT D H YHYD RL +Q + R+ Sbjct: 1145 RRHYDYDKSGNLTRLLDTRKG---------EHHYHYDPLSRLTRADHSQG----EQERFG 1191 Query: 72 YDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQPGSF 131 +DP G + + + + G + + Y G+ + + R+ T Y+ Sbjct: 1192 HDPAGNLLMQNRPGPDI-VAGNRLMIQGDHQYDYDAFGNLIRERRGKGHRLVTEYRYDCQ 1250 Query: 132 TPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSE 191 LI + G+ A + + ++ G+ + ++A+ +E Sbjct: 1251 HRLIGTKKPNGQTASYRYDPFGRRISKTVGDVTTEFFWKGDT----------LIAEHHAE 1300 Query: 192 ESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEW 251 R +L + K + Y DH G P L + +G W A Y + Sbjct: 1301 RHRSYLYEPDSFRPLALLEGFGPKET--KAYHYQLDHLGTPQELTAADGEIVWSAHYRAY 1358 Query: 252 GNLLNEENPHQLQQLIRLPGQQYDEESGLYYNRHRYYDPLQGRYITQDPIGLKGGWNFYQ 311 G + + ++ +R GQ +D+ESGL+YNRHRYY P GRY+T DP+ L GG N YQ Sbjct: 1359 GEIT-RLDIGKIDNPLRFQGQYFDQESGLHYNRHRYYHPDIGRYLTPDPVKLTGGINAYQ 1417 Query: 312 YPLNPVQYIDSMGLASKYGHLNNGGYGARPNKPPTPDPSKLPDIAKQLRLPYPIDQASSA 371 Y NP ++D +GL+S G G +P + R P Sbjct: 1418 YVPNPTGWVDPLGLSSCP-----GRDGCKPKTEAALTTETTSVDKGEPRPPKGASTEYLY 1472 Query: 372 PNVFKTFFRALSPYDYTLYCRKWVKPNLTCTPQDDSQYPGMDTKTASDYLPQTNWPTTQL 431 K + K +L D + P T+ + ++ T Sbjct: 1473 RGDHKNPDHVFQHG----FKSKGNSNDLYLHALDSNNPPSNFISTSPSKITAIDFATRYG 1528 Query: 432 PPGYTCAEPYLFP--DINKPDGPATAGIDDLGEILAKMKQRT 471 P DINK G A D+ EI + K T Sbjct: 1529 TRKGFLYALKKIPGRDINKELG-KLAPFDNEAEIAIQSKIDT 1569 Score = 93.7 bits (231), Expect = 1e-17, Method: Composition-based stats. Identities = 44/225 (19%), Positives = 61/225 (27%), Gaps = 37/225 (16%) Query: 3 PDNRIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYA 62 NR+ + Y YD G L Y YD QHRL+ + Sbjct: 1210 AGNRLMIQGDHQYDYDAFGNLIR-------ERRGKGHRLVTEYRYDCQHRLIGTKKPNG- 1261 Query: 63 EPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRI 122 + Y YDP GRR++K V T + W GD L + Sbjct: 1262 ---QTASYRYDPFGRRISKTV---------------GDVTTEFFWKGDTLIAEHHAERHR 1303 Query: 123 QTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLES 182 +Y+P SF PL +E G D L + Sbjct: 1304 SYLYEPDSFRPLALLEGF-GPKETKAYHYQLDHLGTPQELTAADGEIVWSAHYRAYGEIT 1362 Query: 183 EILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCD 227 + ++ R Q Q + YH D Sbjct: 1363 RLDIGKIDNPLRF----------QGQYFDQESGLHYNRHRYYHPD 1397 Score = 82.5 bits (202), Expect = 3e-14, Method: Composition-based stats. Identities = 78/465 (16%), Positives = 120/465 (25%), Gaps = 97/465 (20%) Query: 7 IARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLV 66 + Y YDR G L D Y YD Q+RL + Sbjct: 1014 LPDGNSVNYAYDRQGNLLSVDD----------GNWFLAYEYDVQNRLTAE-----HQGWG 1058 Query: 67 ESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQV-------TWYGWDGDRLTTIQNDR 119 RY YD G+ R+ R V T + ++ DR Q + Sbjct: 1059 TLRYGYDACGQLTNLRLPDNNRLTFNHDKGGHLSTVELNGAVLTSHQFNADR--EQQRTQ 1116 Query: 120 TRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDR 179 ++ + YQ L E +R D D Sbjct: 1117 GKLLSTYQHDHQGRLFNQSIGDAEGPVYRRHYDYDKSGNLTRLLDTRK---GEHHYHYDP 1173 Query: 180 LESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKI----HLYHCDHRGLP--- 232 L AD E R+ + + R + H Y D G Sbjct: 1174 LSRLTRADHSQGEQERFGHDPAGNLLMQNRPGPDIVAGNRLMIQGDHQYDYDAFGNLIRE 1233 Query: 233 ------LALVS--------------TEGATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQ 272 + G YD +G +++ + G Sbjct: 1234 RRGKGHRLVTEYRYDCQHRLIGTKKPNGQ-TASYRYDPFGRRISKT-VGDVTTEFFWKGD 1291 Query: 273 QYDEESGLYYNRHR--YYDPLQGRYITQDPIGLKGGWNF-----YQYPLNPVQYIDSMG- 324 E + RHR Y+P R P+ L G+ Y Y +D +G Sbjct: 1292 TLIAE--HHAERHRSYLYEPDSFR-----PLALLEGFGPKETKAYHY------QLDHLGT 1338 Query: 325 ---LASKYGHLNNGGYGARPNKPPTPDPSKLPDIAK---------------QLRLPYPID 366 L + G + + + D K+ + + + R +P Sbjct: 1339 PQELTAADGEIVWSAHYRAYGEITRLDIGKIDNPLRFQGQYFDQESGLHYNRHRYYHPDI 1398 Query: 367 QASSAPNVFKTFFRALSPYDYTLYCRKWVKP-NLTCTPQDDSQYP 410 P+ K ++ Y Y WV P L+ P D P Sbjct: 1399 GRYLTPDPVKL-TGGINAYQYVPNPTGWVDPLGLSSCPGRDGCKP 1442 Score = 76.0 bits (185), Expect = 3e-12, Method: Composition-based stats. Identities = 68/412 (16%), Positives = 112/412 (27%), Gaps = 73/412 (17%) Query: 4 DNRIARDAHYLYRYDRHGRLTEKTDLIPEGV-----IRTDDERTHRYHYDSQHRLVHYTR 58 DN + R Y GR+ I V + ++ Y YD RLV T Sbjct: 573 DNGVGRSLFLRY---ASGRIVAVDYQIQRIVDEGPYVWVTEQTVVSYAYDGAGRLVSAT- 628 Query: 59 TQYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQ-----------VTWYGW 107 Y YD + + + W + + T Y W Sbjct: 629 ---NAVGESEVYRYDEQHVILERGLAGGASFYWEWEQAGKAARCVRHWASFSQMDTRYAW 685 Query: 108 DGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSV 167 D + T+ N + IY L++ G Sbjct: 686 DDNGQVTVFNADGSQE-IYVHDQRARLVQRVDPDGAEHFKSYDEKGRL------------ 732 Query: 168 VFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCD 227 + Q D + + T + N V + Y + Sbjct: 733 ----TVEQDPLGAVKAYQYDDAARLVALFPGEDEPTTYEHDNGFVRVVRRGEAVWKYERN 788 Query: 228 HRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRLP--GQQYDEE--SGLYYN 283 +G + +G Y+++G L+ P Q + GQ +E+ +G Sbjct: 789 DQGDVIRRTDPDGNATD-YSYNKYGQLVGVWYPDHSCQTLVWNERGQLLEEQCPNGGIK- 846 Query: 284 RHRYYDPLQGRYITQ-DPIG------------------LKGGWNFYQYPLNPVQYI---- 320 R+RY D GR I+Q D G G Y Y NP I Sbjct: 847 RYRYDD--LGRKISQEDEHGALTQFEWNDVGRLVQIVLPSGDTRKYTY--NPYGKITSER 902 Query: 321 DSMGLASKYGHLNNGGYGARPNKPPTPDPSKLPDIAKQLRLPYPIDQASSAP 372 D +G ++Y + + +R + D + L + + Sbjct: 903 DELGNITRYEYADGLHLISRRLNADGSQVNYRYDNVRLLLTEIENEVGETYR 954 Score = 70.6 bits (171), Expect = 1e-10, Method: Composition-based stats. Identities = 46/294 (15%), Positives = 76/294 (25%), Gaps = 60/294 (20%) Query: 8 ARDAHYLYRYDRHG--RLTEK---------TDLIPEGVIRTDDERTHRYHYDSQHRLVHY 56 D Y +D +G R+ + D D Y Y+ +LV Sbjct: 759 GEDEPTTYEHD-NGFVRVVRRGEAVWKYERNDQGDVIRRTDPDGNATDYSYNKYGQLVGV 817 Query: 57 TRTQYA-----------------EPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRK 99 ++ RY YD LGR++++ Sbjct: 818 WYPDHSCQTLVWNERGQLLEEQCPNGGIKRYRYDDLGRKISQEDEHGA------------ 865 Query: 100 PQVTWYGW-DGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQ 158 +T + W D RL I + Y + + G + + + + + Sbjct: 866 --LTQFEWNDVGRLVQIVLPSGDTR-KYTYNPYGKITSERDELGNITRYEYADGLHLISR 922 Query: 159 SGGEDGGSVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPA 218 DG V + V RL + + V E R S GL ++ Sbjct: 923 RLNADGSQVNYRYDNV----RLLLTEIENEVGETYRLQYHSNGLIQQETGF--------D 970 Query: 219 RKIHLYHCDHRGLPLALV---STEGATEWCAEYDEWGNLLNEENPHQLQQLIRL 269 + Y D G E D G L+ + P Sbjct: 971 GQRTAYVYDLNGNLQEKTEHGDDGSQLVTRYERDHAGRLVRKTLPDGNSVNYAY 1024 Score = 69.8 bits (169), Expect = 2e-10, Method: Composition-based stats. Identities = 46/286 (16%), Positives = 70/286 (24%), Gaps = 34/286 (11%) Query: 8 ARDAHYLYRYDRHGRL--TEKTDLIPEG------------VIRTDDERTHRYHYDSQHRL 53 A + YRYD RL TE + + E D + Y YD L Sbjct: 926 ADGSQVNYRYDNV-RLLLTEIENEVGETYRLQYHSNGLIQQETGFDGQRTAYVYDLNGNL 984 Query: 54 VHYTRTQYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSR------KPQVTWYGW 107 T + +RY D GR V K + + Y + Sbjct: 985 QEKTEHGDDGSQLVTRYERDHAGRLVRKTLPDGNSVNYAYDRQGNLLSVDDGNWFLAYEY 1044 Query: 108 D-GDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGS 166 D +RLT ++ Y + L + + Sbjct: 1045 DVQNRLTAEHQGWGTLR--YGYDACGQLTNLRLPDNNRLTFNHDKGGHLSTVELNGAVLT 1102 Query: 167 ---VVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKI-- 221 + +L S D + + V + D R + Sbjct: 1103 SHQFNADREQQRTQGKLLSTYQHDHQGRLFNQSIGDAEGPVYRRHYDYDKSGNLTRLLDT 1162 Query: 222 ----HLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQL 263 H YH D + +D GNLL + P Sbjct: 1163 RKGEHHYHYDPLSRLTRA-DHSQGEQERFGHDPAGNLLMQNRPGPD 1207 Score = 68.3 bits (165), Expect = 6e-10, Method: Composition-based stats. Identities = 49/267 (18%), Positives = 77/267 (28%), Gaps = 43/267 (16%) Query: 14 LYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYLYD 73 YRYD GR + D ++ ++ RLV +Y Y+ Sbjct: 847 RYRYDDLGRKISQEDEHGAL---------TQFEWNDVGRLVQIVLPSGD----TRKYTYN 893 Query: 74 PLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGW-DGDRLTTIQNDRTRIQTIYQPGSFT 132 P G+ ++R +T Y + DG L + + + Q Y+ + Sbjct: 894 PYGKITSER--------------DELGNITRYEYADGLHLISRRLNADGSQVNYRYDNVR 939 Query: 133 -PLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVL----------VQMLDRLE 181 L +E GE + Q S +QQ G DG + L +L Sbjct: 940 LLLTEIENEVGETYRLQYHSNG-LIQQETGFDGQRTAYVYDLNGNLQEKTEHGDDGSQLV 998 Query: 182 SEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIH-LYHCDHRGLPLALVSTEG 240 + D R+ L Q + + Y D + A G Sbjct: 999 TRYERDHAGRLVRKTLPDGNSVNYAYDRQGNLLSVDDGNWFLAYEYDVQNRLTAEHQGWG 1058 Query: 241 ATEWCAEYDEWGNLLNEENPHQLQQLI 267 YD G L N P + Sbjct: 1059 TL--RYGYDACGQLTNLRLPDNNRLTF 1083 >UniRef50_A1U3R9 YD repeat protein n=3 Tax=Gammaproteobacteria RepID=A1U3R9_MARAV Length = 1611 Score = 246 bits (628), Expect = 1e-63, Method: Composition-based stats. Identities = 80/339 (23%), Positives = 133/339 (39%), Gaps = 32/339 (9%) Query: 5 NRIAR-DAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAE 63 R+ A Y+YD +G L D +Y YD RLV Sbjct: 1161 GRLKDISAQRDYQYDPNGNLKSIQDSRKGL---------RQYVYDPMDRLVGVR------ 1205 Query: 64 PLVESRYLYDPLGRRVAKRVWRRERDLT---GWMSLSRKPQVTWYGWDGDRLTTIQNDRT 120 + + ++DP G + + + G Y G+ + + Sbjct: 1206 GDLYEQLIHDPAGNLLEQNLGASSGQSANVRGNRLTMHGDSHYEYDEFGNLIEERRGKGQ 1265 Query: 121 RIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRL 180 ++ T Y L V T G + + + ++ G ++ Sbjct: 1266 KLVTRYTYDCEHRLTSVTTPDGSTWHYEYDAFGRRIAKTNGLTRTEFLWQGD-------- 1317 Query: 181 ESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEG 240 ++A+ ++ R +L +D +++ YH DH G P L + +G Sbjct: 1318 --RLIAEETGDQYRTYLYEPDSFKPLAL--VDGQGPEEAEVYYYHLDHLGTPQELTNQQG 1373 Query: 241 ATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEESGLYYNRHRYYDPLQGRYITQDP 300 W Y +GN++ ++ + +R GQ +D E+GL+YNRHRYY+P GR+IT DP Sbjct: 1374 RLVWSVTYRAYGNVVQQQVAE-IDNPLRFQGQYHDPETGLHYNRHRYYNPNTGRFITPDP 1432 Query: 301 IGLKGGWNFYQYPLNPVQYIDSMGLASKYGHLNNGGYGA 339 IGL GG N YQY NP ++D +GLAS+ + + Sbjct: 1433 IGLAGGLNNYQYVPNPTGWVDPLGLASRQKNDPDSAGSP 1471 Score = 107 bits (267), Expect = 1e-21, Method: Composition-based stats. Identities = 46/228 (20%), Positives = 69/228 (30%), Gaps = 31/228 (13%) Query: 4 DNRIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAE 63 NR+ Y YD G L E + RY YD +HRL T + Sbjct: 1237 GNRLTMHGDSHYEYDEFGNLIE-------ERRGKGQKLVTRYTYDCEHRLTSVTTPDGS- 1288 Query: 64 PLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQ 123 Y YD GRR+AK T + W GDRL + Sbjct: 1289 ---TWHYEYDAFGRRIAKT---------------NGLTRTEFLWQGDRLIAEETGDQYRT 1330 Query: 124 TIYQPGSFTPLIRVETATGELAKTQRRSLAD-TLQQSGGEDGGSVVFPPVLVQMLDRLES 182 +Y+P SF PL V+ E A+ L Q G +V+ + ++ Sbjct: 1331 YLYEPDSFKPLALVDGQGPEEAEVYYYHLDHLGTPQELTNQQGRLVWSVTYRAYGNVVQQ 1390 Query: 183 EILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRG 230 ++ + + +++ T D G Sbjct: 1391 QVAEIDNPLRFQGQYHDPETGLHYNRHRYYNPNTG----RFITPDPIG 1434 Score = 84.9 bits (208), Expect = 6e-15, Method: Composition-based stats. Identities = 49/308 (15%), Positives = 91/308 (29%), Gaps = 48/308 (15%) Query: 8 ARDAHYLYRY----------DRHGRLTEKTDLIPE--GVIRTDDERTHRYHYDSQHRLVH 55 + + Y D GR+T T + D R H++ ++SQ +L+ Sbjct: 798 RNGQTWKFDYTRHGDLACEADPKGRITRYTYSPQGQLTQVDLPDGRAHKWGWNSQGQLIE 857 Query: 56 YTRTQYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTI 115 T A +Y YD G+ +AK+ + +T Y +DG T Sbjct: 858 ETTPTGAF----YQYRYDEFGQLLAKK--------------DARGAITRYRYDGLGRVTE 899 Query: 116 QNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVL-- 173 + YQ ++ + R G + + + L + DG + + Sbjct: 900 EILSGNRSRHYQYNAYNKVTRFVDEQGRETRYEYDNNLHLLTRRINPDGSELCYRYDHHR 959 Query: 174 ------------VQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKI 221 +D + ++ + + R L + + + Sbjct: 960 FLLTHIENERGEAYRIDYYPNGLVKQETAFDGHRTAYQYDLNGHLTEKAEYGTSSEVLQT 1019 Query: 222 HLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRLP--GQQYDEESG 279 Y D G L +G Y+ G L+ ++ G E G Sbjct: 1020 TTYERDELGQLLKKTLPDGREI-QYGYNADGKLIGVDD-GHWPLAFEYDEFGLLKTEHQG 1077 Query: 280 LYYNRHRY 287 R+RY Sbjct: 1078 WASLRYRY 1085 Score = 72.5 bits (176), Expect = 3e-11, Method: Composition-based stats. Identities = 66/481 (13%), Positives = 121/481 (25%), Gaps = 59/481 (12%) Query: 6 RIARDAHYLYRYDRHG-RLTE----KTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQ 60 R+ D+ +D G RLT + +L G Y YD L+ + Sbjct: 592 RLTNDSGNALAFDFEGSRLTSVRLLRRELTDTGYQWQSLRTERSYTYDDSDDLIGAEDAE 651 Query: 61 YAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRT 120 RY Y+ + R S + W D Sbjct: 652 GG----IERYGYENH--MLTHRQLAGGYSFYLAWDESLPTGRCVHQW---------GDSA 696 Query: 121 RIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLD-- 178 ++ T ++ + V G + A LQ+ DG + L Sbjct: 697 QVDTRFEWDNENHTCTVSYVDGSREIWRYDGTAQ-LQEKVDPDGAKHLSEYDEQGRLKVS 755 Query: 179 ----RLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLA 234 +E D+ + + + + + G Sbjct: 756 IDPMGARTEYQYDKSGRLQSKTGPDGQPILFTYRKGRIAEIHRNGQTWKFDYTRHGDLAC 815 Query: 235 LVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQ----QYDEESGLYYNRHRYYDP 290 +G Y G L + P Q + +G + ++R YD Sbjct: 816 EADPKGRIT-RYTYSPQGQLTQVDLPDGRAHKWGWNSQGQLIEETTPTG-AFYQYR-YD- 871 Query: 291 LQGRYITQDPIGLKGGWNFYQYPLNPVQYIDSMGLASKYGHLNNGGYGARPNKPPTPDPS 350 G+ + + +G Y+Y D +G ++ N + N Sbjct: 872 EFGQLLAK--KDARGAITRYRY--------DGLGRVTEEILSGNRSRHYQYN-------- 913 Query: 351 KLPDIAKQLRLPYPIDQASSAPNVFKTFFRALSPYDYTLYCRKWVKPN-LTCTPQDDSQY 409 + + + N R ++P L R LT + + Sbjct: 914 -AYNKVTRFVDEQGRETRYEYDNNLHLLTRRINPDGSELCYRYDHHRFLLTHIENERGEA 972 Query: 410 PGMDTKTASDYLPQTNWPTTQLPPGYTCAEPYLFPDINKPDG----PATAGIDDLGEILA 465 +D +T + + Y T D+LG++L Sbjct: 973 YRIDYYPNGLVKQETAFDGHRTAYQYDLNGHLTEKAEYGTSSEVLQTTTYERDELGQLLK 1032 Query: 466 K 466 K Sbjct: 1033 K 1033 Score = 61.0 bits (146), Expect = 1e-07, Method: Composition-based stats. Identities = 37/254 (14%), Positives = 72/254 (28%), Gaps = 39/254 (15%) Query: 2 WPDNRIAR-----DAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHY 56 +P+ + + Y+YD +G LTEK + + +T Y D +L+ Sbjct: 978 YPNGLVKQETAFDGHRTAYQYDLNGHLTEKAEYGTSSEVL----QTTTYERDELGQLLKK 1033 Query: 57 TRTQYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQ 116 T E +Y Y+ G+ + + +D L + Sbjct: 1034 TLPDG----REIQYGYNADGKLIGVDDGHWPL---------------AFEYDEFGLLKTE 1074 Query: 117 NDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQM 176 + Y+ F L + G+ + G + P+ Sbjct: 1075 HQG-WASLRYRYDEFDRLHEMVLPDGQALAYHWDAAG-------LLSGIDLNGQPLTRHR 1126 Query: 177 LDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALV 236 + EI + S G + +Q A++ + Y D G ++ Sbjct: 1127 MASTGEEIERQQGDLLSAYVYDDEGRLTQHRIHQGRLKDISAQRDYQY--DPNGNLKSIQ 1184 Query: 237 STEGATEWCAEYDE 250 + YD Sbjct: 1185 DSRKGLR-QYVYDP 1197 >UniRef50_Q147B5 Rhs family protein n=2 Tax=Betaproteobacteria RepID=Q147B5_BURXL Length = 1362 Score = 245 bits (626), Expect = 2e-63, Method: Composition-based stats. Identities = 114/427 (26%), Positives = 158/427 (37%), Gaps = 43/427 (10%) Query: 12 HYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYL 71 YRYD G + E TD HRY YD +L+ + Sbjct: 943 SRTYRYDEVGNVREMTDR---------QSGVHRYRYDPLGQLIESEH---------ETFA 984 Query: 72 YDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQPGSF 131 DP + R + G + Y G+ + I TRI+ Y P Sbjct: 985 LDPAHNIL---DSRDLSPVVGNRVMQFGQHRYVYDMHGNVVEKISGAHTRIRLDYSPAHR 1041 Query: 132 TPLIRV-ETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVS 190 RV T E + +L + + + V +RL SE+ DR Sbjct: 1042 IERARVARNGTEERVEYGYDALGRRVFRKNASGIT------LFVWEGNRLLSEVRDDRTF 1095 Query: 191 EESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDE 250 + + + +N + I YH D GLP G T+W A Y Sbjct: 1096 VYVYAHNSFVPVAQIESRNAQNGRARDDLPIRYYHTDQIGLPYESTDDAGRTQWRARYAA 1155 Query: 251 WGNLLNEENPH--------QLQQLIRLPGQQYDEESGLYYNRHRYYDPLQGRYITQDPIG 302 WG LL H Q Q +R GQ +DEE+GL+YNRHRYYDP GR++TQDPIG Sbjct: 1156 WGRLLGANGGHEQMHESGRQAHQPLRFQGQYFDEETGLHYNRHRYYDPDAGRFMTQDPIG 1215 Query: 303 LKGGWNFYQYPLNPVQYIDSMGLASKYGHLNNGGYGARPNKPPTPDPSKLPDIAKQLRLP 362 L+GG N Y+Y NP ++ID +GLA L+ G N P+ ++ Sbjct: 1216 LRGGINLYRYAPNPGRWIDPLGLA---VDLSLVGPHYACNLNNFPNTFQVLGHGSPGGNI 1272 Query: 363 YPIDQASSAPNVFKTFFRALSPY----DYTLYCRKWVKPNLTCTPQDDSQYPGMDTKTAS 418 + + P+ + R S Y TLY Q S Y G D + Sbjct: 1273 ADLSGETLTPSELGDYMREASNYRQGQPVTLYACHLGAGGKNSYAQQLSNYLGADVNAPT 1332 Query: 419 DYLPQTN 425 D L + Sbjct: 1333 DVLKTID 1339 Score = 78.3 bits (191), Expect = 6e-13, Method: Composition-based stats. Identities = 68/421 (16%), Positives = 121/421 (28%), Gaps = 63/421 (14%) Query: 3 PDNRIARDAH-YLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQY 61 P RI H Y YD RL T+ ++ +R+ YD+ RLV Q Sbjct: 693 PVTRIDALGHCLRYEYDAARRLQTLTN---------ENGAPYRFTYDTAGRLVE----QQ 739 Query: 62 AEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWD-GDRLTTIQ---- 116 RY YD G + D T Y D R+T Sbjct: 740 GFDGRLIRYRYDAAGWLTEQIELGAYEDHAAADGNHPDTLRTTYERDKAGRITATTISRA 799 Query: 117 NDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQM 176 D + ++ + LI + + ++ ++ G S+ + Sbjct: 800 GDERTERITWRYDAAGRLIEA-SNDCCRLERGYDAVGRLSSETSHVAGRSLTVSYEHDAL 858 Query: 177 LDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALV 236 + + + + +L + Q+ + + R + Sbjct: 859 GNHIRTTL----PDGRHIDYLYYGSGHLHQISIDGEVISDIERDALH---------REVS 905 Query: 237 STEGATEWCAEYDEWGN----------LLNEENPHQLQQLIRL-----PGQQYDEESGLY 281 T+G +YD G + + + R + D +SG++ Sbjct: 906 RTQGELVSHYQYDLQGRHIGQQTMGRAVSGHSAITLISRTYRYDEVGNVREMTDRQSGVH 965 Query: 282 YNRHRYYDPLQGRYITQDPIGLKGGWNFYQYPLNPVQYI-DSMGLASKYGH-LNNGGYGA 339 R+RY DP+G + L+P I DS L+ G+ + G Sbjct: 966 --RYRY-----------DPLGQLIESEHETFALDPAHNILDSRDLSPVVGNRVMQFGQHR 1012 Query: 340 RPNKPPTPDPSKLPDIAKQLRLPYPIDQASSAPNVFKTFFRALSPYDYTLYCRKWVKPNL 399 K+ ++RL Y V + Y Y R+ + N Sbjct: 1013 YVYDMHGNVVEKISGAHTRIRLDYSPAHRIERARVARNGTEERVEYGYDALGRRVFRKNA 1072 Query: 400 T 400 + Sbjct: 1073 S 1073 Score = 72.5 bits (176), Expect = 3e-11, Method: Composition-based stats. Identities = 42/304 (13%), Positives = 75/304 (24%), Gaps = 46/304 (15%) Query: 4 DNRIARDAH-----YLYRYDRHGRLTEKTDLIPEGVIRTDDER------------THRYH 46 D R+ R + YD HGRLT D D+ T RY Sbjct: 585 DGRVIRITDAHGKHRHFAYDVHGRLTSHIDCSGRATHYGWDDWGHLALVTNAAGETTRYW 644 Query: 47 YDSQHRLVHYTRTQYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGW-------MSLSRK 99 + + RL+ + YD GR +A + Sbjct: 645 RNRRGRLLRTRHADGTG----EEFTYDIHGRLIAHTDAHGASTQWERAADGLPVTRIDAL 700 Query: 100 PQVTWYGWDGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQ- 158 Y +D R + + + L+ + G L + + + +Q Sbjct: 701 GHCLRYEYDAARRLQTLTNENGAPYRFTYDTAGRLVEQQGFDGRLIRYRYDAAGWLTEQI 760 Query: 159 ---------SGGEDGGSVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQN 209 + + + R+ + ++ E + R ++ Sbjct: 761 ELGAYEDHAAADGNHPDTLRTTYERDKAGRITATTISRAGDERTERITWRYDAAGRLIEA 820 Query: 210 QMDPVYTPARKIHLYHCDHRGLPLALVS--TEGATEWCAEYDEWGNLLNEENPHQLQQLI 267 D D G + S + E+D GN + P Sbjct: 821 SNDCCRLERG------YDAVGRLSSETSHVAGRSLTVSYEHDALGNHIRTTLPDGRHIDY 874 Query: 268 RLPG 271 G Sbjct: 875 LYYG 878 Score = 67.9 bits (164), Expect = 7e-10, Method: Composition-based stats. Identities = 33/275 (12%), Positives = 61/275 (22%), Gaps = 55/275 (20%) Query: 18 DRHGRLTEKTDLIPEGVIR--TDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYLYDPL 75 D G T +R YD++ + T D Sbjct: 487 DAAGNATRIDVDGQGNPLRVTDPAGGVRLATYDARGNMTSLT---------------DAA 531 Query: 76 GRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQPGSFTPLI 135 GRR + + + T + + T +D + + T Y +I Sbjct: 532 GRRTEIQYHPQWQRPT--LIVDAMGAATRVAYDAAGNLIRRTNALGHVTGYAYDDDGRVI 589 Query: 136 RVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSEESRR 195 R+ A G+ + + ++ + E +R Sbjct: 590 RITDAHGKHRHFAYDVHGRLTSHIDCSGRATHYGWDDWGHLA------LVTNAAGETTRY 643 Query: 196 WLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEW----------- 244 W G + + D G +A GA+ Sbjct: 644 WRNRRGRLLRTRHADGTGEE--------FTYDIHGRLIAHTDAHGASTQWERAADGLPVT 695 Query: 245 ---------CAEYDEWGNLLNEENPHQLQQLIRLP 270 EYD + ++ R Sbjct: 696 RIDALGHCLRYEYDA--ARRLQTLTNENGAPYRFT 728 Score = 55.2 bits (131), Expect = 5e-06, Method: Composition-based stats. Identities = 39/277 (14%), Positives = 62/277 (22%), Gaps = 42/277 (15%) Query: 13 YLYRYDRHGRLTEKTDLIPEGV------------IRTDDERTHRYHYDSQHRLVHYTRTQ 60 Y Y G L D + RY YD Q+ L Sbjct: 387 VSYEYSPEGDLVRVRDADGQATREYRYNNHILIEHSQPGALIARYEYD-QYTLDGKVLRL 445 Query: 61 YAEPLVESRYLY--------DPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRL 112 ++ Y D LG R + + T DG Sbjct: 446 ENNLGQTWQFRYLPSRTEVTDALG---QTRCYLFNDQKMMVGQIDAAGNATRIDVDGQGN 502 Query: 113 TTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPV 172 D + + + + A G + Q P Sbjct: 503 PLRVTDPAGGVRLATYDARGNMTSLTDAAGRRTEIQYHPQWQR---------------PT 547 Query: 173 LVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPA--RKIHLYHCDHRG 230 L+ + + D RR A +T + + K + D G Sbjct: 548 LIVDAMGAATRVAYDAAGNLIRRTNALGHVTGYAYDDDGRVIRITDAHGKHRHFAYDVHG 607 Query: 231 LPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLI 267 + + G +D+WG+L N Sbjct: 608 RLTSHIDCSGRAT-HYGWDDWGHLALVTNAAGETTRY 643 >UniRef50_Q87U70 Rhs family protein n=2 Tax=Pseudomonas RepID=Q87U70_PSESM Length = 1572 Score = 243 bits (620), Expect = 9e-63, Method: Composition-based stats. Identities = 86/395 (21%), Positives = 144/395 (36%), Gaps = 36/395 (9%) Query: 12 HYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYL 71 H Y YD +G L D YHYD RL++ T + Sbjct: 1124 HRHYAYDANGNLAGVNDSRKG---------NRSYHYDPLDRLINVRGTTP------ESFA 1168 Query: 72 YDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWD--GDRLTTIQNDRTRIQTIYQPG 129 +DP G + + + Y +D G+++ + ++ T Y+ Sbjct: 1169 HDPAGNLLGQGDQPAANLANVKGNRLLMQGDRHYDYDAYGNQIRERRGTGQKLVTEYRYD 1228 Query: 130 SFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRV 189 LI V G +A + + ++++ ++ ++A+ Sbjct: 1229 CQHRLIGVSLPGGSVASYKYDAFGRRIEKTIDGHITEFLWQGE----------RLIAESA 1278 Query: 190 SEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWCAEYD 249 R ++ G + A Y DH G P L G W A+Y Sbjct: 1279 DNRYRSYIYEPGTFRPLAMLDGEGPLKAAP--FYYQLDHLGTPQELTDYSGEIMWSAKYR 1336 Query: 250 EWGNLLNEENPHQLQQLIRLPGQQYDEESGLYYNRHRYYDPLQGRYITQDPIGLKGGWNF 309 +GN L + +++ +R GQ +D E+GL+YNRHRYY+P GR++T DPI L GG N Sbjct: 1337 AYGN-LATLDIAEIENPLRFQGQYFDAETGLHYNRHRYYNPGTGRFLTPDPIKLAGGLNN 1395 Query: 310 YQYPLNPVQYIDSMGLASKYGHL--NNGGYGARPNKPPTPDPSKLPDIAKQLRLPYPIDQ 367 YQY NP ++D +GL+ + N + + D S+ + Y + Sbjct: 1396 YQYVPNPTGWVDPLGLSGECPDSEKNKIPVEEASSPSNSYDNSEELRPPESNGRRYAAGK 1455 Query: 368 ASSAPNVFKTFFRALSPYDYTLYCRK----WVKPN 398 P R + +Y + W +P Sbjct: 1456 HYVNPQDINFSQRGVHGNEYEAKMSQGDWDWSRPG 1490 Score = 86.0 bits (211), Expect = 3e-15, Method: Composition-based stats. Identities = 50/275 (18%), Positives = 79/275 (28%), Gaps = 47/275 (17%) Query: 4 DNRIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAE 63 NR+ Y YD +G T + Y YD QHRL+ + Sbjct: 1191 GNRLLMQGDRHYDYDAYGNQIR-------ERRGTGQKLVTEYRYDCQHRLIGVSLP---- 1239 Query: 64 PLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQ 123 + Y YD GRR+ K + +T + W G+RL D Sbjct: 1240 GGSVASYKYDAFGRRIEKTIDGH---------------ITEFLWQGERLIAESADNRYRS 1284 Query: 124 TIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGED-GGSVVFPPVLVQMLDRLES 182 IY+PG+F PL ++ A L D G +++ + Sbjct: 1285 YIYEPGTFRPLAMLDGEGPLKAAPFYYQLDHLGTPQELTDYSGEIMWSAKYRAYGNLATL 1344 Query: 183 EILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGAT 242 +I + + +++ T D L L + Sbjct: 1345 DIAEIENPLRFQGQYFDAETGLHYNRHRYYNPGTG----RFLTPDPIKLAGGLNN----- 1395 Query: 243 EWCAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEE 277 +Y NP + L G+ D E Sbjct: 1396 ---YQYVP--------NPTGWVDPLGLSGECPDSE 1419 Score = 85.6 bits (210), Expect = 3e-15, Method: Composition-based stats. Identities = 41/265 (15%), Positives = 71/265 (26%), Gaps = 44/265 (16%) Query: 9 RDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVES 68 Y YD GRL E R D H+ ++ +L+ + Sbjct: 779 DGNETHYSYDLRGRLLEI---------RHPDGSRHQLGWNGLGQLLEERLPDGG----QR 825 Query: 69 RYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWD-GDRLTTIQNDRTRIQTIYQ 127 +Y YD LGR++ ++ +T Y WD +RL + + Sbjct: 826 KYRYDALGRQITRQEETGA--------------ITHYQWDAANRLAQATLPGGATR-AFS 870 Query: 128 PGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILAD 187 ++ + G + + + + + DG + + RL + + Sbjct: 871 YNAYGKVTAERDELGRITRYEYADNLHLVSRRINPDGSQLRYRYDNA----RLLLTEIEN 926 Query: 188 RVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALV---STEGATEW 244 E S GL + Y D G L Sbjct: 927 ERGEHYHLDYYSNGLIQRETGFDGRSTA--------YEYDLNGQLLKKTEFGDDGSELST 978 Query: 245 CAEYDEWGNLLNEENPHQLQQLIRL 269 + D G LL + R Sbjct: 979 EYQRDAAGRLLVKTLADGSAIHYRY 1003 Score = 77.2 bits (188), Expect = 1e-12, Method: Composition-based stats. Identities = 40/246 (16%), Positives = 68/246 (27%), Gaps = 23/246 (9%) Query: 6 RIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPL 65 R+ YRYD GR + + Y +D+ +RL T A Sbjct: 818 RLPDGGQRKYRYDALGRQITRQEETGAI---------THYQWDAANRLAQATLPGGATRA 868 Query: 66 VESRYLY-------DPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQND 118 Y D LGR ++ ++ Y + L T + Sbjct: 869 FSYN-AYGKVTAERDELGRITRYEYADNLHLVSRRINPDGSQLRYRYD-NARLLLTEIEN 926 Query: 119 RTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLD 178 S + R G + L+++ D GS + Sbjct: 927 ERGEHYHLDYYSNGLIQRETGFDGRSTAYEYDLNGQLLKKTEFGDDGSELSTEYQRDAAG 986 Query: 179 RLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHR--GLPLALV 236 RL + LAD + R ++V+ + Y ++ +H+ G Sbjct: 987 RLLVKTLADGSAIHYRYDALGRLVSVDDGHWPLAYEYDLQDRL---ITEHQGWGTLRYEY 1043 Query: 237 STEGAT 242 T G Sbjct: 1044 DTVGQL 1049 Score = 74.5 bits (181), Expect = 8e-12, Method: Composition-based stats. Identities = 60/443 (13%), Positives = 97/443 (21%), Gaps = 64/443 (14%) Query: 27 TDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYLYDPLGRRVAKRVWRR 86 TD + Y Y+ + +LV T Y Y+ + +R Sbjct: 577 TDQGERQDPWATVQTLVTYQYNVKGQLVSATTAAGES----EHYRYNEQ-NVIQERQLAG 631 Query: 87 ERDLTGWMSLSRKPQV------------TWYGWDGDRLTTIQNDRTRIQTIYQPGSFTPL 134 K + Y WD T+ N Q +Y L Sbjct: 632 GASFFWEWENEGKSSRSIHHWANFSQMDSRYIWDDAGQVTVLNADGSEQ-VYVHDENARL 690 Query: 135 IRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSEESR 194 I T G + + + +E D Sbjct: 691 ISETTPDGAETQKAYDEKGRLIAEK----------------DPLGAITEYRYDEDGLLIA 734 Query: 195 RWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNL 254 + + Y + +G +G YD G L Sbjct: 735 LIPPEDEPVAYEYHRGFVSDVRRGKATWKYQRNEQGDITVQTDPDGNET-HYSYDLRGRL 793 Query: 255 LNEENPHQLQQLIRLPG-----QQYDEESGLYYNRHRYYDPLQGRYITQDPIGLKGGWNF 309 L +P + + G ++ + G R YD GR IT+ G Sbjct: 794 LEIRHPDGSRHQLGWNGLGQLLEERLPDGGQRKYR---YD-ALGRQITR--QEETGAITH 847 Query: 310 YQYPLNPVQYIDSMGLASKYGHLNNGGYGARPNKPPTPDPSKLPDIAKQLRLPYPIDQAS 369 YQ + N P R Sbjct: 848 YQ-----------------WDAANRLAQATLPGGATRAFSYNAYGKVTAERDELGRITRY 890 Query: 370 SAPNVFKTFFRALSPYDYTLYCRKWVKP-NLTCTPQDDSQYPGMDTKTASDYLPQTNWPT 428 + R ++P L R LT + ++ +D + +T + Sbjct: 891 EYADNLHLVSRRINPDGSQLRYRYDNARLLLTEIENERGEHYHLDYYSNGLIQRETGFDG 950 Query: 429 TQLPPGYTCAEPYLFPDINKPDG 451 Y L DG Sbjct: 951 RSTAYEYDLNGQLLKKTEFGDDG 973 Score = 64.8 bits (156), Expect = 6e-09, Method: Composition-based stats. Identities = 43/253 (16%), Positives = 69/253 (27%), Gaps = 35/253 (13%) Query: 12 HYLYRYDRHGRLTEKTDLIPEGVI-----------RTDDERTHRYHYDSQHRLVHYTRTQ 60 Y +D G++T E V T D + YD + RL+ Sbjct: 659 DSRYIWDDAGQVTVLNADGSEQVYVHDENARLISETTPDGAETQKAYDEKGRLIAEKDPL 718 Query: 61 YAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWM-----SLSRKPQVTWYGWDGDRLTTI 115 A + Y YD G +A E + + R Y + T+ Sbjct: 719 GA----ITEYRYDEDGLLIALIPPEDEPVAYEYHRGFVSDVRRGKATWKYQRNEQGDITV 774 Query: 116 QNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQ 175 Q D +T Y L+ + G + L L++ + G L + Sbjct: 775 QTDPDGNETHYSYDLRGRLLEIRHPDGSRHQLGWNGLGQLLEERLPDGGQRKYRYDALGR 834 Query: 176 MLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLAL 235 + R E +W A+ L + P + + G A Sbjct: 835 QITRQEETGAI-----THYQWDAANRLAQATL---------PGGATRAFSYNAYGKVTAE 880 Query: 236 VSTEGATEWCAEY 248 G EY Sbjct: 881 RDELGRIT-RYEY 892 >UniRef50_Q4ZLF3 YD repeat n=5 Tax=Pseudomonas syringae group RepID=Q4ZLF3_PSEU2 Length = 451 Score = 238 bits (606), Expect = 5e-61, Method: Composition-based stats. Identities = 84/361 (23%), Positives = 140/361 (38%), Gaps = 30/361 (8%) Query: 12 HYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYL 71 H Y YD G L+ D + +Y Y++ +L+ + + + Sbjct: 19 HRRYEYDPAGELSRTLDKLRG---------ETQYEYEANGQLLARNTGRVVDG---EEFR 66 Query: 72 YDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQPGSF 131 YD R+ + R + ++ Y +D + + Sbjct: 67 YDAAANRL---NFNTSRFDHVKDNRLKQWANHEYKYDAWGNLIEKTVGIVRWQTFTYDCE 123 Query: 132 TPLIRVETATGE----LAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILAD 187 L++ ET + Q SL + + G + + R+ L + Sbjct: 124 NRLVKTETMADTQVESTSSYQYDSLGRRVAKQSEIKGQT--DHKRFLWQGLRM----LRE 177 Query: 188 RVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWCAE 247 +S ++ G + + K++ +H D G PL + EG W A+ Sbjct: 178 ESPGQSSLYIYEPGSYAPLARV-DEKEGEVENKVYYFHTDQIGTPLEMTDAEGQIVWQAK 236 Query: 248 YDEWGNLLNEENPHQLQQLIRLPGQQYDEESGLYYNRHRYYDPLQGRYITQDPIGLKGGW 307 Y WG + + ++++Q +R GQ +D E+GL+YN RYYDP GR+ITQDPIGL GG+ Sbjct: 237 YRAWGAV-EKLVVNEVEQNLRFQGQYFDAETGLHYNTFRYYDPEIGRFITQDPIGLLGGF 295 Query: 308 NFYQYPLNPVQYIDSMGLASKYGHLNNGGYGARPNKPPTPDPSKLPDIAKQLRLPYPIDQ 367 N Y Y NP +ID +GL Y N G D + L D+ ++ +D Sbjct: 296 NLYGYCRNPTAWIDPLGLDWNYFLSNEDG---AYYHGRASDKTSLSDVMRRHGKNKGVDG 352 Query: 368 A 368 A Sbjct: 353 A 353 Score = 101 bits (250), Expect = 8e-20, Method: Composition-based stats. Identities = 51/231 (22%), Positives = 80/231 (34%), Gaps = 30/231 (12%) Query: 4 DNRIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAE 63 DNR+ + A++ Y+YD G L EKT R + YD ++RLV + Sbjct: 86 DNRLKQWANHEYKYDAWGNLIEKT---------VGIVRWQTFTYDCENRLVKTETMADTQ 136 Query: 64 PLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQ 123 S Y YD LGRRVAK+ + + + W G R+ ++ Sbjct: 137 VESTSSYQYDSLGRRVAKQ-----------SEIKGQTDHKRFLWQGLRMLREESPGQSSL 185 Query: 124 TIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESE 183 IY+PGS+ PL RV+ GE+ D + + Sbjct: 186 YIYEPGSYAPLARVDEKEGEVENKVYYFHTDQIGTPLEMTDAEGQIVWQAKYRAWGAVEK 245 Query: 184 ILADRVSEESR----RWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRG 230 ++ + V + R + A GL + + D G Sbjct: 246 LVVNEVEQNLRFQGQYFDAETGLHYNTFRYYDPEIG------RFITQDPIG 290 >UniRef50_Q7NY44 Probable Rhs-family protein n=2 Tax=Chromobacterium violaceum RepID=Q7NY44_CHRVO Length = 1513 Score = 235 bits (600), Expect = 2e-60, Method: Composition-based stats. Identities = 82/341 (24%), Positives = 125/341 (36%), Gaps = 41/341 (12%) Query: 12 HYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYL 71 Y+YD G+L D + Y YD RL+ + + Sbjct: 1072 SRQYQYDAAGQLVGIAD---------NRHGQLSYRYDPVGRLLEAATPKG-----VESFR 1117 Query: 72 YDPLGRRVA---KRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQP 128 +DP G + ++ L G + + Y G+ + N + Sbjct: 1118 FDPAGNLLDNAPAADGHQDYSLLGNLLSQYAGRHYRYDSRGNLVEKRVNGSLT---RLEW 1174 Query: 129 GSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADR 188 S L R+ G+ L + + + + ++ R E+ + Sbjct: 1175 DSHNRLSRLIAPDGQRTDYHYDPLGRRIAKISQGEATLYGWDGDVLAFETRDEAAVHYLF 1234 Query: 189 VSE-----ESRRWLASCGLTVEQMQ------------NQMDPVYTPARKIHLYHCDHRGL 231 + A G+ V Q P + ++ YH DH G Sbjct: 1235 EPDSFVPLAQVHTDAIRGVKVPAWSQHHPYDPDKDPLRQPAPEPEAPKAVYYYHTDHLGT 1294 Query: 232 PLALVSTEGATEWCAEYDEWGNLLN----EENPHQLQQLIRLPGQQYDEESGLYYNRHRY 287 P AL GA +Y WG ++ R GQ +D+ESGL+YNRHRY Sbjct: 1295 PQALTDEHGALALEMDYQAWGQAREVIADAAGKAGIRNPFRFQGQYHDDESGLHYNRHRY 1354 Query: 288 YDPLQGRYITQDPIGLKGGWNFYQYPLNPVQYIDSMGLASK 328 YDP GR+I++DPIGLKGG N Y Y LNP+ ++D +GL K Sbjct: 1355 YDPEIGRFISRDPIGLKGGINIYGYALNPIVWMDPLGLTGK 1395 Score = 86.4 bits (212), Expect = 2e-15, Method: Composition-based stats. Identities = 51/327 (15%), Positives = 85/327 (25%), Gaps = 54/327 (16%) Query: 10 DAHYLYRYDRHGRLTEKTDLIPE------------GVIRTDDERTHRYHYDSQHRLVHYT 57 Y YD+ GRL ++TD +R ++ R +R+ YD RL T Sbjct: 833 GRGTHYEYDKAGRLQKRTDANGHSLGYQYDKLGRLTALRNENHRYYRFDYDDGGRLTAET 892 Query: 58 RTQYA----------------EPLVESRYLYDPLGRRVAKRVWRRERDLTGWMS------ 95 + E V + Y YD GR + + + + Sbjct: 893 GFDGSATRYVYDNAGRLAQQVEGDVATDYRYDRAGRLIERSAPNSKESFGYDPAGRLFQA 952 Query: 96 -LSRKPQVTWYGWDGDRLTTIQNDRT-----RIQTIYQPGSFTPLIRVETATGELAKTQR 149 Y G+ + + ++ I G Sbjct: 953 KNRYASLRWVYDPVGNVVEEHHGYHVAGVKETYRWQHEYDKLGNRIATIRPDGHRVDVLN 1012 Query: 150 RSLAD-----TLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTV 204 Q+ + + + L+ + D+ S + L Sbjct: 1013 YGSGHVHGLLFGQRDIFNLERDKLHRETQRVLGNALQQTLAYDKAGRLSSQRLMGATQWS 1072 Query: 205 EQMQNQMDPVYTPARKIHL----YHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENP 260 Q Q Y D G L + +G +D GNLL+ Sbjct: 1073 RQYQYDAAGQLVGIADNRHGQLSYRYDPVGRLLEAATPKG--VESFRFDPAGNLLDNAPA 1130 Query: 261 HQLQQLIRLPGQQYDEESGLYYNRHRY 287 Q L G + +G +Y RY Sbjct: 1131 ADGHQDYSLLGNLLSQYAGRHY---RY 1154 Score = 72.1 bits (175), Expect = 5e-11, Method: Composition-based stats. Identities = 40/287 (13%), Positives = 73/287 (25%), Gaps = 45/287 (15%) Query: 13 YLYRYDRHGRLTEKT----------DLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYA 62 YRYDR GRL E++ D + + R+ YD +V + Sbjct: 919 TDYRYDRAGRLIERSAPNSKESFGYDPAGRLFQAKNRYASLRWVYDPVGNVVEEHHGYHV 978 Query: 63 EPL---VESRYLYDPLGRRVAKRVWRRERDLTGWMSL----------------------- 96 + ++ YD LG R+A R Sbjct: 979 AGVKETYRWQHEYDKLGNRIATIRPDGHRVDVLNYGSGHVHGLLFGQRDIFNLERDKLHR 1038 Query: 97 -------SRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQR 149 + Q Y G + T+ YQ + L+ + + Sbjct: 1039 ETQRVLGNALQQTLAYDKAGRLSSQRLMGATQWSRQYQYDAAGQLVGIADNRHGQLSYRY 1098 Query: 150 RSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQN 209 + L+ + + S F P + + ++ D + + G Sbjct: 1099 DPVGRLLEAATPKGVESFRFDPAGNLLDNAPAADGHQDYSLLGNLLSQYA-GRHYRYDSR 1157 Query: 210 QMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLN 256 + D L++ +G YD G + Sbjct: 1158 GNLVEKRVNGSLTRLEWDSHNRLSRLIAPDGQRTD-YHYDPLGRRIA 1203 Score = 70.2 bits (170), Expect = 2e-10, Method: Composition-based stats. Identities = 62/460 (13%), Positives = 124/460 (26%), Gaps = 66/460 (14%) Query: 18 DRHGRLTEKTDLIPE-GVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVE---SRYLYD 73 DR G + + YD R+V + L + Y Y Sbjct: 478 DRAGNTLAINFRDGRISQLVSSAGYVVALSYDKAGRIVRIEQHDPETGLAMRKLAEYRYT 537 Query: 74 -------PLGRRVAKRVWRRERDLTGWM------SLSRKPQVTWYGWDGD----RLTTIQ 116 G ++ + + R + T WDG R Sbjct: 538 DIPQLDGDAGDLLSATDENGQSWSYQYQHHLITRYTDRTGRGTTLEWDGSHAKARAIREY 597 Query: 117 NDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQM 176 D + + L V A G + + + + ++ Sbjct: 598 ADDGSLDIRLAWDARIDLTYVTDAYGRTTEYYFDEKGYHYRTVFPDKSEEWLNYDANKRL 657 Query: 177 LDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALV 236 + + + ++E+ + L + + + + + D + + ++ Sbjct: 658 IIHIHPD-----ATQENYSYDDRGNLVLHERADGSEV---------HFVYDEQDNLVEII 703 Query: 237 STEGATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQ-----QYDEESGLYYNRHRYYDPL 291 G W YD+ G L+ E +P + Q D + G +R Sbjct: 704 DPMGEK-WLRAYDDKGQLIEETDPLGHKTKYAYNEQGLPVAITDAKGGAKKIAYR----- 757 Query: 292 QGRYITQDPIGLK-------GGWNFYQYP--LNPVQYIDSMGLASKYGHLNNGGYGARPN 342 P GL G +QY P+ +D+MG A++Y + NG A Sbjct: 758 --------PDGLLESYTDCSGSATQWQYDERGRPLLIVDAMGNATRYQYAANGTLQAIVQ 809 Query: 343 KPPTPDPSKLPDIAK--QLRLPYPIDQASSAPNVFKTFFRALSPYDYTLYCRKWVKPNLT 400 + A+ ++ P + + ++L + LT Sbjct: 810 PDGQATQLEHDAEARLLKITDPLGRGTHYEYDKAGRLQ-KRTDANGHSLGYQYDKLGRLT 868 Query: 401 CTPQDDSQYPGMDTKTASDYLPQTNWPTTQLPPGYTCAEP 440 ++ +Y D +T + + Y A Sbjct: 869 ALRNENHRYYRFDYDDGGRLTAETGFDGSATRYVYDNAGR 908 Score = 67.9 bits (164), Expect = 8e-10, Method: Composition-based stats. Identities = 53/317 (16%), Positives = 91/317 (28%), Gaps = 69/317 (21%) Query: 8 ARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVE 67 A + + YD L E D + E +R YD + +L+ T + Sbjct: 684 ADGSEVHFVYDEQDNLVEIIDPMGEKWLR---------AYDDKGQLIEETDPLGHK---- 730 Query: 68 SRYLYDPLGRRVA---------KRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQND 118 ++Y Y+ G VA K +R + L + S Y G L + Sbjct: 731 TKYAYNEQGLPVAITDAKGGAKKIAYRPDGLLESYTDCSGSATQWQYDERGRPLLIVDAM 790 Query: 119 RTRIQTIY-------------------QPGSFTPLIRVETATGELAKTQRRSLADTLQQS 159 + Y + + L+++ G + LQ+ Sbjct: 791 GNATRYQYAANGTLQAIVQPDGQATQLEHDAEARLLKITDPLGRGTHYEYDKAG-RLQKR 849 Query: 160 GGEDGGSVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPAR 219 +G S+ + + L L +E + R+ G + Sbjct: 850 TDANGHSLGYQYDKLGRLTALRNE------NHRYYRFDYDDGGRLTAETGFDGSATR--- 900 Query: 220 KIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEESG 279 Y D+ G EG YD G L+ P+ + D Sbjct: 901 ----YVYDNAG--RLAQQVEGDVATDYRYDRAGRLIERSAPNSKES-FGY-----DPAGR 948 Query: 280 LYYNRHRY------YDP 290 L+ ++RY YDP Sbjct: 949 LFQAKNRYASLRWVYDP 965 Score = 64.1 bits (154), Expect = 1e-08, Method: Composition-based stats. Identities = 38/287 (13%), Positives = 68/287 (23%), Gaps = 49/287 (17%) Query: 13 YLYRYDRHGRLTEKTDLIPEG--VIRTDDERTHRYH----------YDSQHR--LVHYTR 58 Y Y+ G TD + D Y YD + R L+ Sbjct: 731 TKYAYNEQGLPVAITDAKGGAKKIAYRPDGLLESYTDCSGSATQWQYDERGRPLLI---- 786 Query: 59 TQYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRK-------PQVTWYGWDGDR 111 +RY Y G A + + +R + T Y +D Sbjct: 787 --VDAMGNATRYQYAANGTLQAIVQPDGQATQLEHDAEARLLKITDPLGRGTHYEYDKAG 844 Query: 112 LTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPP 171 + D YQ L + + ++G + + Sbjct: 845 RLQKRTDANGHSLGYQYDKLGRLTALRNENHRYYRFDYDDGGRLTAETGFDGSATRYVYD 904 Query: 172 VLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGL 231 ++ ++E ++ D R+ + L N + + Sbjct: 905 NAGRLAQQVEGDVATD------YRYDRAGRLIERSAPNSKESFGYDPAGRLFQAKNRYAS 958 Query: 232 PLALVSTEGATE----------------WCAEYDEWGNLLNEENPHQ 262 + G W EYD+ GN + P Sbjct: 959 LRWVYDPVGNVVEEHHGYHVAGVKETYRWQHEYDKLGNRIATIRPDG 1005 Score = 56.0 bits (133), Expect = 4e-06, Method: Composition-based stats. Identities = 57/373 (15%), Positives = 90/373 (24%), Gaps = 90/373 (24%) Query: 9 RDAHYLYRY---------DRHGRLTEKTDLIPEGVIR------TDDERTHRYHYDSQHRL 53 + Y+Y DR GR T R D R +D++ L Sbjct: 556 NGQSWSYQYQHHLITRYTDRTGRGTTLEWDGSHAKARAIREYADDGSLDIRLAWDARIDL 615 Query: 54 VHYTRTQYAEPLVE-----SRYL------------YDPLGRRVAKRVWRRERDLTGWMSL 96 + T Y YD R + + Sbjct: 616 TYVTDAYGRTTEYYFDEKGYHYRTVFPDKSEEWLNYDANKRLIIHIHPDATQ-------- 667 Query: 97 SRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTL 156 + Y G+ + + D + + +Y L+ + GE + Sbjct: 668 ----ENYSYDDRGNLVLHERADGSEVHFVY--DEQDNLVEIIDPMGEKWLRAYDDKGQLI 721 Query: 157 QQSGGEDGGSVVFP-----PVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQM 211 +++ + PV + +I S T Q + Sbjct: 722 EETDPLGHKTKYAYNEQGLPVAITDAKGGAKKIAYRPDGLLESYTDCSGSATQWQYDERG 781 Query: 212 DP---VYTPARKIHLYHCDHRGLPLALVSTEGATEW--------------------CAEY 248 P V + G A+V +G EY Sbjct: 782 RPLLIVDAMGNATRYQYA-ANGTLQAIVQPDGQATQLEHDAEARLLKITDPLGRGTHYEY 840 Query: 249 DEWGNLLNEENPHQLQQLIRLPGQQYD---EESGLYYNRHRY----YDPLQGRYITQDPI 301 D+ G L + + G QYD + L HRY YD GR + Sbjct: 841 DKAGRLQKRTDANGHS-----LGYQYDKLGRLTALRNENHRYYRFDYD-DGGRLTAE--T 892 Query: 302 GLKGGWNFYQYPL 314 G G Y Y Sbjct: 893 GFDGSATRYVYDN 905 >UniRef50_Q2SKM2 Rhs family protein n=3 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SKM2_HAHCH Length = 1552 Score = 235 bits (600), Expect = 2e-60, Method: Composition-based stats. Identities = 88/359 (24%), Positives = 137/359 (38%), Gaps = 44/359 (12%) Query: 12 HYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYL 71 Y YD G L DL T Y YD+ RL E + Sbjct: 1083 ERSYGYDASGNLALIDDLKKG---------TTHYRYDALDRLKTV------EGYCNEEFA 1127 Query: 72 YDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQPGSF 131 +DP G + + G + Y G+ + + R++T YQ Sbjct: 1128 FDPAGNIL-----DGQNQAKGNRLNFHGDRHFEYDAAGNLILEKRGKGGRLETRYQYNKQ 1182 Query: 132 TPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSE 191 LI +E G+ + Q +L + + ++ + +L+++ + Sbjct: 1183 NQLIAIE-KDGQKTEYQYDALGRRIAKQDAFGKTEFLWNGDV----------LLSEQRNH 1231 Query: 192 ESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEW 251 + ++ + ++++ YH DH G P + + EG W A Y + Sbjct: 1232 LHKIYVYEPNSFRPLA-------FIQDKQVYHYHLDHLGTPQEMTNAEGEVVWSARYKAY 1284 Query: 252 GNLLNEENPHQLQQLIRLPGQQYDEESGLYYNRHRYYDPLQGRYITQDPIGLKGGWNFYQ 311 GNL ++ +Q +R GQ YDEE+GL+YNRHRYYDP R+I QDP+GL GG N YQ Sbjct: 1285 GNLAL-KDVEDVQNPLRFQGQYYDEETGLHYNRHRYYDPSAARFINQDPVGLLGGDNNYQ 1343 Query: 312 YPLNPVQYIDSMGLASKYG-----HLNNGGYGARPNKPPTPDPSKLPDIAKQLRLPYPI 365 Y NP + D GL K G + G G N D ++ + Sbjct: 1344 YAPNPTGWGDPFGLTCKEGKELDNYRIENGIGFDKNGVYRGVIPFSNDHVFEIIDKNDV 1402 Score = 87.9 bits (216), Expect = 8e-16, Method: Composition-based stats. Identities = 45/275 (16%), Positives = 81/275 (29%), Gaps = 54/275 (19%) Query: 4 DNRIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAE 63 NR+ + YD G L RY Y+ Q++L+ + Sbjct: 1143 GNRLNFHGDRHFEYDAAGNLI-------LEKRGKGGRLETRYQYNKQNQLIAIE-----K 1190 Query: 64 PLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQ 123 ++ Y YD LGRR+AK+ T + W+GD L + Q + Sbjct: 1191 DGQKTEYQYDALGRRIAKQ---------------DAFGKTEFLWNGDVLLSEQRNHLHKI 1235 Query: 124 TIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESE 183 +Y+P SF PL + + Q G VV+ + + Sbjct: 1236 YVYEPNSFRPLAFI----QDKQVYHYHLDHLGTPQEMTNAEGEVVWSARYKAYGNLALKD 1291 Query: 184 ILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATE 243 + + + + +++ + D P+ L+ + Sbjct: 1292 VEDVQNPLRFQGQYYDEETGLHYNRHRYYDPSAA----RFINQD----PVGLLGGDNN-- 1341 Query: 244 WCAEYDEWGNLLNEENPHQLQQLIRLP---GQQYD 275 +Y NP L G++ D Sbjct: 1342 --YQYAP--------NPTGWGDPFGLTCKEGKELD 1366 Score = 81.4 bits (199), Expect = 7e-14, Method: Composition-based stats. Identities = 65/454 (14%), Positives = 107/454 (23%), Gaps = 63/454 (13%) Query: 9 RDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVES 68 + YD G++ ++ D R YD+ LV T + Sbjct: 629 NGGRTTFHYDDRGQIVKEIDPEGGITRR---------AYDNAGNLVEQTDPNGHS----T 675 Query: 69 RYLYDPLGRRVAKRVWRRERDLTGWMS-------LSRKPQVTWYGWDGDRLTTIQNDRTR 121 Y Y+ G+ A + + V ++ L D Sbjct: 676 HYAYNDNGQLTALIDANGGHYKIDYNDDGMPVAITNALGHVWRREYNEQGLLARITDPEG 735 Query: 122 IQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLE 181 QT Y+ ++ A G+ + Q + ++ + + Sbjct: 736 AQTQYEYNEQGLPQKIIDALGQARELQWNREGQLVSETDNQHTTRYAYNAQG-------- 787 Query: 182 SEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGA 241 A ++ + V +++ V K+ D + G Sbjct: 788 QVRAATDHQGQTTAYQYDRNGNVTEVKRPDGSVL----KMRYNANDQL---THFIDAAGR 840 Query: 242 TEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEE---SGLYYN-RHRY---YDPLQGR 294 YD G + Q YD+E GL RY YD R Sbjct: 841 CT-EYVYD--GLAQVRKRIDPAGQTFEY---LYDKERNLIGLINEKGERYELAYD-RNER 893 Query: 295 YITQDPIGLKGGWNFYQYPLNPVQYIDSMGLASKYGHLNNGGYGARPNKPPTPDPSKLPD 354 I + IG G YQY D G + G D Sbjct: 894 LIQE--IGFDGRVQQYQY--------DPAGHLK----AHIEGVHDDERIRAQHTTLFKRD 939 Query: 355 IAKQLRLPYPIDQASSAPNVFKTFFRALSPYDYTLYCRKWVKPNLTCTPQDDSQYPGMDT 414 +LR + D S + Y + D Q + Sbjct: 940 PLGRLREKHSPDGDISRFAYNANGQLTQASNPYRTLEFAYTPTGRLAEEIQDGQRLRHEY 999 Query: 415 KTASDYLPQTNWPTTQLPPGYTCAEPYLFPDINK 448 + L GY + N Sbjct: 1000 NPLGARIQSLLPNGGVLGFGYDRHGLFTQASFNG 1033 Score = 68.7 bits (166), Expect = 4e-10, Method: Composition-based stats. Identities = 40/286 (13%), Positives = 71/286 (24%), Gaps = 33/286 (11%) Query: 13 YLYRYDRHGRLTEKTDLIPEGVIRTDDERTHR----------Y----HYDSQHRLVHYTR 58 Y YD L + D G Y YD R V Sbjct: 546 VRYEYDDAQDLAQVRDPAGAGESYAYRNHVITRRTLKTGFSFYFEWSRYDKAARCVRQWG 605 Query: 59 TQYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWM--------SLSRKPQVTWYGWDGD 110 Q + + R+ +DP + + + T + + +T +D Sbjct: 606 DQG---VYDYRFEWDPA-NKTSHAIDSNGGRTTFHYDDRGQIVKEIDPEGGITRRAYDNA 661 Query: 111 RLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFP 170 Q D T Y L + A G K + + Sbjct: 662 GNLVEQTDPNGHSTHYAYNDNGQLTALIDANGGHYKIDYNDDGMPVAITNALGHVWRREY 721 Query: 171 PVLVQML-----DRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARK-IHLY 224 + + +++ + + A Q + V + Y Sbjct: 722 NEQGLLARITDPEGAQTQYEYNEQGLPQKIIDALGQARELQWNREGQLVSETDNQHTTRY 781 Query: 225 HCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRLP 270 + +G A +G T +YD GN+ + P +R Sbjct: 782 AYNAQGQVRAATDHQGQTTA-YQYDRNGNVTEVKRPDGSVLKMRYN 826 Score = 65.6 bits (158), Expect = 4e-09, Method: Composition-based stats. Identities = 50/316 (15%), Positives = 85/316 (26%), Gaps = 63/316 (19%) Query: 3 PDNRIARDA----HYLYRYDRHGRLTEKTDLIP------------EGVIRTDDERTHRYH 46 N + + Y Y+ +G+LT D I R Sbjct: 661 AGNLVEQTDPNGHSTHYAYNDNGQLTALIDANGGHYKIDYNDDGMPVAITNALGHVWRRE 720 Query: 47 YDSQHRLVHYTRTQYAEPLVESRYLYDPLG---RRVAKRVWRRERDLTGWMSL---SRKP 100 Y+ Q L T + A +++Y Y+ G + + RE L + Sbjct: 721 YNEQGLLARITDPEGA----QTQYEYNEQGLPQKIIDALGQARELQWNREGQLVSETDNQ 776 Query: 101 QVTWYGWDGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLAD------ 154 T Y ++ D T YQ + V+ G + K + + Sbjct: 777 HTTRYAYNAQGQVRAATDHQGQTTAYQYDRNGNVTEVKRPDGSVLKMRYNANDQLTHFID 836 Query: 155 --------------TLQQSGGEDGGSVVFPPVLVQMLDRLESE--ILADRVSEESRRWLA 198 +++ G + + + L L +E + + + R + Sbjct: 837 AAGRCTEYVYDGLAQVRKRIDPAGQTFEYLYDKERNLIGLINEKGERYELAYDRNERLIQ 896 Query: 199 SCGLTVEQMQNQMDPVY---------TPARKIHLYHC-----DHRGLPLALVSTEGATEW 244 G Q Q DP +I H D G S +G Sbjct: 897 EIGFDGRVQQYQYDPAGHLKAHIEGVHDDERIRAQHTTLFKRDPLGRLREKHSPDGDI-S 955 Query: 245 CAEYDEWGNLLNEENP 260 Y+ G L NP Sbjct: 956 RFAYNANGQLTQASNP 971 Score = 55.2 bits (131), Expect = 6e-06, Method: Composition-based stats. Identities = 54/400 (13%), Positives = 101/400 (25%), Gaps = 55/400 (13%) Query: 73 DPLGRRVAKRVWRRERDLTGWMSL--SRKPQVTWYGWDGDRLTTI-----QNDRTRIQTI 125 D +G V + W+ ++L + + + + L + Sbjct: 488 DGVGNGVRIQYWQDLDGYERPVTLIQTSWGKRLYVLHNAQGLICEIQSLRADGDVDTLVR 547 Query: 126 YQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEIL 185 Y+ L +V G R+ + + + G S F R + Sbjct: 548 YEYDDAQDLAQVRDPAGAGESYAYRNHV--ITRRTLKTGFSFYFEWSRYDKAARCVRQWG 605 Query: 186 ADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWC 245 V + W N+ +H D RG + + EG Sbjct: 606 DQGVYDYRFEWD---------PANKTSHAIDSNGGRTTFHYDDRGQIVKEIDPEGGIT-R 655 Query: 246 AEYDEWGNLLNEENPHQLQQLIRLP-------------GQQYDE----------ESGLYY 282 YD GNL+ + +P+ G + + L + Sbjct: 656 RAYDNAGNLVEQTDPNGHSTHYAYNDNGQLTALIDANGGHYKIDYNDDGMPVAITNALGH 715 Query: 283 NRHRYYDPL--QGRYITQDPIGLKGGWNFYQYPLN----PVQYIDSMGLASKYGHLNNGG 336 R Y+ R DP +G Y+Y N P + ID++G A + G Sbjct: 716 VWRREYNEQGLLARIT--DP---EGAQTQYEY--NEQGLPQKIIDALGQARELQWNREGQ 768 Query: 337 YGARPNKPPTPDPSKLPDIAKQLRLPYPIDQASSAPNVFKTFFRALSPYDYTLYCRKWVK 396 + + T + + + + + P L R Sbjct: 769 LVSETDNQHTTRYAYNAQGQVRAATDHQGQTTAYQYDRNGNVTEVKRPDGSVLKMRYNAN 828 Query: 397 PNLTCTPQDDSQYPGMDTKTASDYLPQTNWPTTQLPPGYT 436 LT + + + + Y Sbjct: 829 DQLTHFIDAAGRCTEYVYDGLAQVRKRIDPAGQTFEYLYD 868 >UniRef50_A1TV35 YD repeat protein n=2 Tax=Acidovorax RepID=A1TV35_ACIAC Length = 1679 Score = 233 bits (593), Expect = 2e-59, Method: Composition-based stats. Identities = 111/366 (30%), Positives = 154/366 (42%), Gaps = 49/366 (13%) Query: 2 WPDNRIA-----------RDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQ 50 WP NRI +DA Y+YD G + D R R HYD+ Sbjct: 1192 WPGNRIGWSTVQRADSHQKDALIRYQYDAFGNRVQVLH---------PDGRIQRLHYDAL 1242 Query: 51 HRLVHYTRTQYAEPLVE--SRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWD 108 H+L + + + Y YD LGRR++K V + L T+ GWD Sbjct: 1243 HQLREVCQREQLGGAWRLIASYRYDALGRRLSKTV---------YDQLDHGGTTTYAGWD 1293 Query: 109 GDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGG-SV 167 GDRL + + T+Y+PGSF PL+R+E + Q D+ + + Sbjct: 1294 GDRLIHTEGAKGFFHTLYEPGSFVPLLRLERSKAIPTAMQVLLALDSTEDDDSDAPALGR 1353 Query: 168 VFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQ-------------MQNQMDPV 214 F L + L +L + + LA+ + + + Sbjct: 1354 NFFAALPRAQRDLLEGVLHSAIGTCAEASLANLSSNLPLDVRVLLANGLDEIRGRRTNFA 1413 Query: 215 YTPARKIHLYHCDHRGLPLALVSTEGA----TEWCAEYDEWGNLLNEENPHQLQQLIRLP 270 I CDH G P+A+V G W A Y WG L E NP+ + Q IR Sbjct: 1414 RAEDTCIRHILCDHLGTPIAMVDANGRHSGLLTWAATYHSWGALREEYNPNDISQPIRFQ 1473 Query: 271 GQQYDEESGLYYNRHRYYDPLQGRYITQDPIGLKGGWNFYQYPLNPVQYIDSMGLASKYG 330 GQQ+D E+GL+YNR RYYDP G+Y+TQDPIGL GG + Y YP++P +ID GL Sbjct: 1474 GQQFDAETGLHYNRLRYYDPSLGQYLTQDPIGLLGGNDKYIYPVSPTGWIDPTGLNPLAA 1533 Query: 331 HLNNGG 336 G Sbjct: 1534 CAVPGP 1539 Score = 69.1 bits (167), Expect = 4e-10, Method: Composition-based stats. Identities = 73/512 (14%), Positives = 122/512 (23%), Gaps = 103/512 (20%) Query: 15 YRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYLY-- 72 YRYD G L E + D R+ YD+ HR+ + Q RY+Y Sbjct: 322 YRYDSAGNLAEV--------LGADGTVLRRFGYDALHRMTEHQVRQGP----RHRYVYED 369 Query: 73 -DPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGD------------RLTTIQNDR 119 GRR + W + + ++ + G R +T+ D Sbjct: 370 QTAQGRR---QGWAARPGARVAEQHNEEGLSYFFDYGGAPVAAGDGPAASVRSSTVVRDS 426 Query: 120 TRIQTIY---QPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQM 176 T Y G L+R+ G + S L + + Sbjct: 427 LGRTTTYHFEGEGGLKRLVRLTGPDGAEQSYRHDSAGRRLSATDALGRTTW-----WRYD 481 Query: 177 LDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALV 236 + +RW A+ + D + Sbjct: 482 GAGRLLGVQGPDGRSTQQRWGAAGSAQDGLLLASQDAAGLRTHYRY-------------- 527 Query: 237 STEGATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEESGLYYNRHRYYDPLQGRYI 296 G G L Q D +G P + Sbjct: 528 DDWGRLV-EVAMLPEGRTDEAATLQALITRFEYEQPQQDAGTGAVTFP-----PHTLAWC 581 Query: 297 TQDP---IGLKGGWNFYQY--PLNPVQYIDSMGLASKYGHLNNGG--------------- 336 Q P I +GG + Y Y ++ D G + + H G Sbjct: 582 DQ-PVAVIDAQGGRSQYAYNACGQITRHTDCSGHSQTWRHGAWGEVVEAVDALGQRTRLH 640 Query: 337 YGARPNKPPTPDPSKLPDIAKQLRLPYPIDQASSAPNVFKTFFRALSP--------YDYT 388 + + + + A + R A+ P Y + Sbjct: 641 HAMQQGALRLVGVQQPGNTAVRYRWNETGRMAAITHGTHDVLEGTGEPAGTSATIAYRHD 700 Query: 389 LY--------------CRKWVKPNLTCTPQDDSQYPGMDTKTASDYLPQTNWPTTQLPPG 434 L+ R V L ++ A + + + G Sbjct: 701 LWGRVVEQVQAGRGVQLRYDVAGRLQELVNENGDVTRFVHDVADRLVQEVGFDGRSQVYG 760 Query: 435 YTCAEPYLFPDINKPDG--PATAGIDDLGEIL 464 Y A +G P A +LG ++ Sbjct: 761 YDAAGQLTHTGDGHGEGHHPGAAARPELGAVV 792 Score = 66.0 bits (159), Expect = 3e-09, Method: Composition-based stats. Identities = 33/235 (14%), Positives = 61/235 (25%), Gaps = 43/235 (18%) Query: 7 IARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLV 66 + A Y+YD G+L RY YD+ RL E + Sbjct: 1079 LRTIAQRRYQYDALGQLVGVQTP----------GEATRYGYDAWQRLTAM-HRAGPEGEL 1127 Query: 67 ESRYLYDPLGRRV------------------------AKRVWRRERDLTGWMSLSRKPQV 102 ++ D G R+ + + DL + Sbjct: 1128 HEHWVLDAAGNRLPSFGGAQAAIPHAGRQPEAWAREVRENLHDAGFDLLRANGGPGESSG 1187 Query: 103 TWYGWDGDRLTTIQNDRTRIQT-----IYQPGSFTPLIRVETATGELAKTQRRSLADTL- 156 T W G+R+ R YQ +F ++V G + + +L Sbjct: 1188 TVTHWPGNRIGWSTVQRADSHQKDALIRYQYDAFGNRVQVLHPDGRIQRLHYDALHQLRE 1247 Query: 157 --QQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQN 209 Q+ ++ + RL + + + G + + Sbjct: 1248 VCQREQLGGAWRLIASYRYDALGRRLSKTVYDQLDHGGTTTYAGWDGDRLIHTEG 1302 Score = 60.6 bits (145), Expect = 1e-07, Method: Composition-based stats. Identities = 44/329 (13%), Positives = 77/329 (23%), Gaps = 78/329 (23%) Query: 9 RDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVES 68 A YR+D GR TD + RT + YD RL+ Sbjct: 451 DGAEQSYRHDSAGRRLSATDAL---------GRTTWWRYDGAGRLLGVQGPDGRSTQQRW 501 Query: 69 ----------------------RYLYDPLGRRVA-------------------------- 80 Y YD GR V Sbjct: 502 GAAGSAQDGLLLASQDAAGLRTHYRYDDWGRLVEVAMLPEGRTDEAATLQALITRFEYEQ 561 Query: 81 -KRVWRRERDLTGWMSL----------SRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQPG 129 ++ +L + + Y ++ T D + ++ G Sbjct: 562 PQQDAGTGAVTFPPHTLAWCDQPVAVIDAQGGRSQYAYNACGQITRHTDCSGHSQTWRHG 621 Query: 130 SFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRV 189 ++ ++ A G+ + L+ G + G+ + V Sbjct: 622 AWGEVVEAVDALGQRTRLHHAMQQGALRLVGVQQPGNTAVRYRWNETGRMAAITHGTHDV 681 Query: 190 SEESRRWLASCGLTVEQMQNQMDPVYTPAR----KIHLYHCDHRGLPLALVSTEGATEWC 245 E + + + V ++ D G LV+ G Sbjct: 682 LEGTGEPAGTSATIAYRHDLWGRVVEQVQAGRGVQLRY---DVAGRLQELVNENGDVT-R 737 Query: 246 AEYDEWGNLLNEENPHQLQQLIRL--PGQ 272 +D L+ E Q+ GQ Sbjct: 738 FVHDVADRLVQEVGFDGRSQVYGYDAAGQ 766 Score = 51.3 bits (121), Expect = 8e-05, Method: Composition-based stats. Identities = 44/321 (13%), Positives = 77/321 (23%), Gaps = 89/321 (27%) Query: 13 YLYRYDRHGRLTEKTDLIPEGVIRTDDERTHR--------------------------YH 46 + YD R+TE +++T + + Sbjct: 342 RRFGYDALHRMTEHQVRQGPRHRYVYEDQTAQGRRQGWAARPGARVAEQHNEEGLSYFFD 401 Query: 47 Y----------------------DSQH--------------RLVHYTRTQYAEPLVESRY 70 Y DS RLV T A E Y Sbjct: 402 YGGAPVAAGDGPAASVRSSTVVRDSLGRTTTYHFEGEGGLKRLVRLTGPDGA----EQSY 457 Query: 71 LYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDG-DRLTTIQNDRTR---IQTIY 126 +D GRR++ + TW+ +DG RL +Q R + Sbjct: 458 RHDSAGRRLSAT--------------DALGRTTWWRYDGAGRLLGVQGPDGRSTQQRWGA 503 Query: 127 QPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILA 186 + L+ L R L + G L ++ R E E Sbjct: 504 AGSAQDGLLLASQDAAGLRTHYRYDDWGRLVEVAMLPEGRTDEAATLQALITRFEYEQPQ 563 Query: 187 DRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWCA 246 + + +Q +D ++ Y + G G Sbjct: 564 QDAGTGAVTFPPHTLAWCDQPVAVIDAQGGRSQ----YAYNACGQITRHTDCSGH-SQTW 618 Query: 247 EYDEWGNLLNEENPHQLQQLI 267 + WG ++ + + + Sbjct: 619 RHGAWGEVVEAVDALGQRTRL 639 Score = 50.2 bits (118), Expect = 2e-04, Method: Composition-based stats. Identities = 31/217 (14%), Positives = 56/217 (25%), Gaps = 16/217 (7%) Query: 8 ARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTH-RYHYDSQHRLVHYTRTQYAE--- 63 A+ Y Y+ G++T TD D+ + Sbjct: 590 AQGGRSQYAYNACGQITRHTDCSGHSQTWRHGAWGEVVEAVDALGQRTRLHHAMQQGALR 649 Query: 64 -------PLVESRYLYDPLGRRVAKRVWRRER-DLTGWMSLSRKPQVTWYGWDGDRLTTI 115 RY ++ GR A + + TG + + + G + + Sbjct: 650 LVGVQQPGNTAVRYRWNETGRMAAITHGTHDVLEGTGEPAGTSATIAYRHDLWGRVVEQV 709 Query: 116 QNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQ 175 Q R + L + G++ + +AD L Q G DG S V+ Sbjct: 710 QAGRGVQL---RYDVAGRLQELVNENGDVTRF-VHDVADRLVQEVGFDGRSQVYGYDAAG 765 Query: 176 MLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMD 212 L + R + + Sbjct: 766 QLTHTGDGHGEGHHPGAAARPELGAVVRTRLHYDLGG 802 Score = 47.5 bits (111), Expect = 0.001, Method: Composition-based stats. Identities = 36/223 (16%), Positives = 52/223 (23%), Gaps = 22/223 (9%) Query: 55 HYTRTQYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTT 114 P Y YD G + + + +G+D T Sbjct: 307 AVIPGAAPRPQPLVGYRYDSAGNL-------------AEVLGADGTVLRRFGYDALHRMT 353 Query: 115 IQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLV 174 R + Y T R + + + GG+ V Sbjct: 354 EHQVRQGPRHRYVYEDQTAQGRRQGWAARPGARVAEQHNEEGLSYFFDYGGAPVAAGDGP 413 Query: 175 QMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLA 234 R + + + + GL D Y D G L+ Sbjct: 414 AASVRSSTVVRDSLGRTTTYHFEGEGGLKRLVRLTGPDGAEQS------YRHDSAGRRLS 467 Query: 235 LVSTEGATEWCAEYDEWGNLLNEENPH--QLQQLIRLPGQQYD 275 G T W YD G LL + P QQ G D Sbjct: 468 ATDALGRTTW-WRYDGAGRLLGVQGPDGRSTQQRWGAAGSAQD 509 Score = 44.8 bits (104), Expect = 0.007, Method: Composition-based stats. Identities = 33/215 (15%), Positives = 55/215 (25%), Gaps = 25/215 (11%) Query: 13 YLYRYDRHGRLTEKT----DLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVES 68 YR++ GR+ T D++ T Y +D R+V + L Sbjct: 661 VRYRWNETGRMAAITHGTHDVLEGTGEPAGTSATIAYRHDLWGRVVEQVQAGRGVQL--- 717 Query: 69 RYLYDPLGRRVAKRVWRRERDLTGWMSLSR---------KPQVTWYGWDGDRLTTIQNDR 119 YD GR + R + QV Y G +LT + Sbjct: 718 --RYDVAGRLQELVNENGDVTRFVHDVADRLVQEVGFDGRSQVYGYDAAG-QLTHTGDGH 774 Query: 120 TRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDR 179 R E + + + +L Sbjct: 775 GEGHHP------GAAARPELGAVVRTRLHYDLGGRLVARVAVRLPAPEPSDTEPHAILQI 828 Query: 180 LESEILADRVSEESRRWLASCGLTVEQMQNQMDPV 214 E + +++R W A VE M + + Sbjct: 829 QRFEHTSAGALQQTRTWEAELPHGVEPMASPTGSM 863 Score = 44.0 bits (102), Expect = 0.012, Method: Composition-based stats. Identities = 24/137 (17%), Positives = 36/137 (26%), Gaps = 24/137 (17%) Query: 6 RIARDAHYLYRYDRHGRLTEKTDLIPEGVIRT------------DDERTHRYHYDSQHRL 53 ++ RYD GRL E + + D R+ Y YD+ +L Sbjct: 708 QVQAGRGVQLRYDVAGRLQELVNENGDVTRFVHDVADRLVQEVGFDGRSQVYGYDAAGQL 767 Query: 54 VH------------YTRTQYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQ 101 H +V +R YD GR VA+ R Q Sbjct: 768 THTGDGHGEGHHPGAAARPELGAVVRTRLHYDLGGRLVARVAVRLPAPEPSDTEPHAILQ 827 Query: 102 VTWYGWDGDRLTTIQND 118 + + Sbjct: 828 IQRFEHTSAGALQQTRT 844 >UniRef50_B1J8X0 YD repeat protein n=50 Tax=Gammaproteobacteria RepID=B1J8X0_PSEPW Length = 1411 Score = 229 bits (583), Expect = 2e-58, Method: Composition-based stats. Identities = 81/350 (23%), Positives = 135/350 (38%), Gaps = 29/350 (8%) Query: 12 HYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYL 71 H Y+YD G L D + + Y Y++ +L + + Sbjct: 983 HRRYQYDPAGELVRTLDKLRGEIK---------YEYEANGQL---HSRDTGSLVGSEEFR 1030 Query: 72 YDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQPGSF 131 YDP R+ + + + ++ + Y +D + + Sbjct: 1031 YDPAANRL---DFNARQFEKVKDNRIKRWRDQEYRYDPWGNLIEKRSGHSKLQSFSYDCE 1087 Query: 132 TPLIR----VETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILAD 187 L+R V + SL + + +G + + R+ L + Sbjct: 1088 NRLVRAETLVNGKLESTGAYRYDSLGRRIAKQSEINGTT--EQKRFLWQGLRM----LRE 1141 Query: 188 RVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWCAE 247 +S +L G + +D +KI+ +H D G PL L +EG W A Sbjct: 1142 ETPGQSILYLYEPGSYAPLAR--VDQAEGDEQKIYYFHTDQIGTPLELTDSEGKIVWQAT 1199 Query: 248 YDEWGNLLNEENPHQLQQLIRLPGQQYDEESGLYYNRHRYYDPLQGRYITQDPIGLKGGW 307 Y WG + + +++ Q +R GQ +D E+ L+YN RYYDP GR+I DPIGL+GG Sbjct: 1200 YRSWGAI-EQLTVNEIDQNLRFQGQYFDRETSLHYNTLRYYDPDVGRFIGPDPIGLRGGV 1258 Query: 308 NFYQYPLNPVQYIDSMGLASKY-GHLNNGGYGARPNKPPTPDPSKLPDIA 356 N ++Y +NP+ +ID GLA +NN R TP + + Sbjct: 1259 NLFRYNVNPIYWIDPTGLAPCQVRVVNNTKIHGRGQVDGTPGHDQFSEAI 1308 Score = 68.7 bits (166), Expect = 5e-10, Method: Composition-based stats. Identities = 49/329 (14%), Positives = 73/329 (22%), Gaps = 64/329 (19%) Query: 7 IARDAHYLYRYDRHGRLTEKTDLIPEGVIRTD-DERTHRYHYDSQHRLVHYTRTQYAEPL 65 + RDA + YD RL + Y YD RL A Sbjct: 819 VNRDARQDFEYDEADRLLSIQRTPSSLGKQLGITGEKLSYRYDLLGRLTQELTPSGA--- 875 Query: 66 VESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQ------------------------ 101 Y YDPL + + + Q Sbjct: 876 --LDYEYDPLSNLTTLTLPDGRKVNHLYYGSGHLHQLNLDGQVISDMERDDLHREVYRTQ 933 Query: 102 ---VTWYGWDGDR--------------LTTIQNDRTRI-----------QTIYQPGSFTP 133 + +G+D L+ +QN YQ Sbjct: 934 GKLTSCFGYDAMGRKAWQFASTLPAEKLSQVQNPGINTSLLVEHAYNPIHRRYQYDPAGE 993 Query: 134 LIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSEES 193 L+R K + + + G GS F + Sbjct: 994 LVRTLDKLRGEIKYEYEANGQLHSRDTGSLVGSEEFRYDPAANRLDFNARQFEKVKDNRI 1053 Query: 194 RRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGAT--EWCAEYDEW 251 +RW + Y C++R L A G YD Sbjct: 1054 KRWRDQEYRYDPWGNLIEKRSGHSKLQSFSYDCENR-LVRAETLVNGKLESTGAYRYDSL 1112 Query: 252 GNLL---NEENPHQLQQLIRLPGQQYDEE 277 G + +E N Q+ G + E Sbjct: 1113 GRRIAKQSEINGTTEQKRFLWQGLRMLRE 1141 Score = 62.5 bits (150), Expect = 3e-08, Method: Composition-based stats. Identities = 36/270 (13%), Positives = 72/270 (26%), Gaps = 31/270 (11%) Query: 30 IPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEP-----------------LVESRYLY 72 ++ Y YD + L+ T + Y Sbjct: 637 AQVERFEDCSGKSTYYRYDERQHLIAVTDALNQTTTLERKPDGEVLRIHHPDGTAESFTY 696 Query: 73 DPLGRRVAKRVWRRERDLTGWMS-------LSRKPQVTWYGWD-GDRLTTIQNDRTRIQT 124 + LG+ + + + S K Q Y +D RLT + N+ + Sbjct: 697 NTLGQVLTHTDGKGQTTRLQRTSRGLPSSRQDAKGQWVRYEYDKALRLTALVNENSAA-Y 755 Query: 125 IYQPGSFTPLIRVETATGELAKTQRRSLADTLQ---QSGGEDGGSVVFPPVLVQMLDRLE 181 + + L + + + ++ GE+G V + Sbjct: 756 RFAYDASDRLSEEVRVDNLTRRFSYDAGGNLVRLDEIGYGENGERPERDTVFERDAIGRL 815 Query: 182 SEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGA 241 + ++ A L++++ + + + Y D G ++ GA Sbjct: 816 LAKVNRDARQDFEYDEADRLLSIQRTPSSLGKQLGITGEKLSYRYDLLGRLTQELTPSGA 875 Query: 242 TEWCAEYDEWGNLLNEENPHQLQQLIRLPG 271 EYD NL P + G Sbjct: 876 L--DYEYDPLSNLTTLTLPDGRKVNHLYYG 903 Score = 60.2 bits (144), Expect = 1e-07, Method: Composition-based stats. Identities = 47/293 (16%), Positives = 83/293 (28%), Gaps = 51/293 (17%) Query: 2 WPDNRIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRT-- 59 + +N + ++ D GRL K + + YD RL+ RT Sbjct: 794 YGENGERPERDTVFERDAIGRLLAKVNRDAR----------QDFEYDEADRLLSIQRTPS 843 Query: 60 ----QYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTI 115 Q + Y YD LGR + D Y + T Sbjct: 844 SLGKQLGITGEKLSYRYDLLGRLTQELTPSGALDY-------------EYDPLSNLTTLT 890 Query: 116 QNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQ 175 D ++ +Y GS L ++ ++ +R L + ++ G+ + F + Sbjct: 891 LPDGRKVNHLY-YGS-GHLHQLNLDGQVISDMERDDLHREVYRTQGKL--TSCFGYDAMG 946 Query: 176 MLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLAL 235 + L + + + L VE N + Y D G + Sbjct: 947 RKAWQFASTLPAEKLSQVQNPGINTSLLVEHAYNPIH---------RRYQYDPAGELVRT 997 Query: 236 VST-EGATEWCAEYDEWGNL-LNEENPHQLQQLIRLPGQQYDEESGLYYNRHR 286 + G EY+ G L + + R D + R Sbjct: 998 LDKLRGEI--KYEYEANGQLHSRDTGSLVGSEEFRY-----DPAANRLDFNAR 1043 Score = 59.8 bits (143), Expect = 2e-07, Method: Composition-based stats. Identities = 51/345 (14%), Positives = 88/345 (25%), Gaps = 59/345 (17%) Query: 5 NRIARDAHYLYRYDRHGR--LTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYA 62 N + + + D G+ ++T + + RY YD RL A Sbjct: 697 NTLGQVLTHT---DGKGQTTRLQRTSRGLPSSRQDAKGQWVRYEYDKALRLTALVNENSA 753 Query: 63 E-----------------PLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLS-------- 97 + R+ YD G V + + Sbjct: 754 AYRFAYDASDRLSEEVRVDNLTRRFSYDAGGNLVRLDEIGYGENGERPERDTVFERDAIG 813 Query: 98 ------RKPQVTWYGWD-GDRLTTIQNDR---------TRIQTIYQPGSFTPLIRVETAT 141 + + +D DRL +IQ T + Y+ L + T + Sbjct: 814 RLLAKVNRDARQDFEYDEADRLLSIQRTPSSLGKQLGITGEKLSYRYDLLGRLTQELTPS 873 Query: 142 GE-LAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSEESRRWLASC 200 G + S TL G + + + L+ I + R + Sbjct: 874 GALDYEYDPLSNLTTLTLPDGRKVNHLYYGSGHLHQLNLDGQVISDMERDDLHREVYRTQ 933 Query: 201 GLTVEQMQNQMDPVYT-------PARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGN 253 G PA K+ L + +YD G Sbjct: 934 GKLTSCFGYDAMGRKAWQFASTLPAEKLSQVQNPGINTSLLVEHAYNPIHRRYQYDPAGE 993 Query: 254 LLNEENPHQLQQLIRL--PGQQYDEESGLYY--NRHRYYDPLQGR 294 L+ + + + GQ + ++G R YDP R Sbjct: 994 LVRTLDKLRGEIKYEYEANGQLHSRDTGSLVGSEEFR-YDPAANR 1037 Score = 52.9 bits (125), Expect = 3e-05, Method: Composition-based stats. Identities = 42/259 (16%), Positives = 70/259 (27%), Gaps = 41/259 (15%) Query: 4 DNRI---ARDAHYLY--RYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTR 58 D+R+ Y +D G + D YD RLV T Sbjct: 509 DHRVVASRDFGGERYGMEFDAFGNII---------GFTLPDGNRLGLKYDDFGRLVEET- 558 Query: 59 TQYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQND 118 DPLGR+++ + +T + Y G+ + I Sbjct: 559 --------------DPLGRKISYKHHLATPLVTETRFPDGSIWKSRYDGKGNLIAEIDPL 604 Query: 119 RTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLD 178 + + + L +K + +++ G S + Q L Sbjct: 605 GHKTEYL---NGEDGLPHTIIDANFKSKYLWWNTYAQVERFEDCSGKSTYYRYDERQHLI 661 Query: 179 RLE-----SEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPA---RKIHLYHCDHRG 230 + + L + E R G N + V T + RG Sbjct: 662 AVTDALNQTTTLERKPDGEVLRIHHPDGTAESFTYNTLGQVLTHTDGKGQTTRLQRTSRG 721 Query: 231 LPLALVSTEGATEWCAEYD 249 LP + +G EYD Sbjct: 722 LPSSRQDAKGQWV-RYEYD 739 Score = 48.7 bits (114), Expect = 5e-04, Method: Composition-based stats. Identities = 34/235 (14%), Positives = 62/235 (26%), Gaps = 14/235 (5%) Query: 12 HYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYL 71 H Y + GRLTE V + E RY YD +L ++ Sbjct: 389 HLHYEH-PLGRLTEV----KRIVDQQAVETLVRYRYDDSGQLTEVINRNGDS---VRQFH 440 Query: 72 YDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQPGSF 131 Y G V W + + KP+V + W D +T + Sbjct: 441 Y-AEGLMVRHSNALGLICEYRWQTQNDKPRVVEH-WTSDGEHYHFRYDFAQRTSWATDVL 498 Query: 132 TPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFP-PVLVQMLDRLESEILADRVS 190 + + R + G + F P ++ + + + Sbjct: 499 GRELEIHYNEDHRVVASRDFGGERYGMEFDAFGNIIGFTLPDGNRLGLKYDDFGRLVEET 558 Query: 191 EESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWC 245 + R ++ + + K D +G +A + G Sbjct: 559 DPLGRKISYKHHLATPLVTETRFPDGSIWKSRY---DGKGNLIAEIDPLGHKTEY 610 >UniRef50_D0KES6 YD repeat protein n=15 Tax=Gammaproteobacteria RepID=D0KES6_PECWW Length = 1379 Score = 227 bits (578), Expect = 7e-58, Method: Composition-based stats. Identities = 89/414 (21%), Positives = 142/414 (34%), Gaps = 44/414 (10%) Query: 4 DNRIARDAHYLYR---YDRHGRLTEK---------------------TDLIPEGVIRTDD 39 I+R + YD GRLT + T +R Sbjct: 928 HREISRTQGRRTQQRAYDSLGRLTSQRSGLWDVAEPEQQLLSRALRYTASGELASVRDSL 987 Query: 40 ERTHRYHYDSQHRLVHYTRTQYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRK 99 +Y YD++ RL+ R + Y YD R L+ L+ + Sbjct: 988 RGDVQYDYDAEGRLLK--RIDVHWQVHHRAYGYDAADNLQDSAYSPSARPLSDNRLLNWR 1045 Query: 100 PQVTWYGWDGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGEL---AKTQRRSLADTL 156 Y G+ + + + YQ + L+ + A+ +L Sbjct: 1046 HLWNQYDGQGNLIRRREG---TTEQFYQYDADNRLVEARGRGPQGEFVARYGYDALGRRT 1102 Query: 157 QQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYT 216 +++ + RL L R ++ + +L + + Sbjct: 1103 RKTVTWGDSGKQEETRFLWEGFRL----LQARQADRTETYLYDPTIWWSPLARITQQPGA 1158 Query: 217 PARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQ--------LQQLIR 268 P I ++ + G PL + EGA W +Y +G + + + Q +R Sbjct: 1159 PDGDIRWFNTELNGAPLEMTDAEGAVRWSGDYGSFGAINGQTQDSEGLRHGKPVESQSLR 1218 Query: 269 LPGQQYDEESGLYYNRHRYYDPLQGRYITQDPIGLKGGWNFYQYPLNPVQYIDSMGLASK 328 GQ DEE+GL+YN RYYDP GR+ TQDPIGL GG N Y Y NP+ ++D +GLA Sbjct: 1219 YAGQYADEETGLHYNLFRYYDPTVGRFTTQDPIGLAGGLNLYAYAPNPLGWVDPLGLAKI 1278 Query: 329 YGHLNNGGYGARPNKPPTPDPSKLPDIAKQLRLPYPIDQASSAPNVFKTFFRAL 382 G+ + TP P K + P + +V L Sbjct: 1279 LTDGVVYRMGSGTDSNLTPRPGKDTTTGLSTTIEKPSNGKYQTLDVKTLNDGGL 1332 Score = 62.9 bits (151), Expect = 3e-08, Method: Composition-based stats. Identities = 47/298 (15%), Positives = 78/298 (26%), Gaps = 73/298 (24%) Query: 2 WPDNRI-----ARDAHYLYRYDRHGRLTEKTDLIPE-------------GVIRTDDERTH 43 + D + A +D +GRL +TD + ++ D Sbjct: 530 YADGELCDVIMPGGASRKTTWDDYGRLLSETDPLGRETCYQWYRLTGHITLVTYPDGSRE 589 Query: 44 RYHYDSQHRLVHYTRTQYAEPLVESRYLY------------DPLGRRVAKRVWRRERDLT 91 + YD +RLV + +RY Y D LG R Sbjct: 590 QMQYDDLNRLVEEIDARGNS----TRYQYPTAQESLPDSITDALG---GTVTLVWNRQGL 642 Query: 92 GWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRS 151 Q + + +D D D T + + L V G + + Sbjct: 643 LTARTDCSGQCSTFEYDHDGQLLASVDAEGHTTRREWDACGHLTSVIYPDGRRETLRWNA 702 Query: 152 LADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQM 211 ++ + + L + + RW Sbjct: 703 RGQLQAWRDAQNS-------EVRWHYNVLGQPVSVTDRLRRTTRW--------------- 740 Query: 212 DPVYTPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRL 269 H D RGL L L + GA + YD G L+NE+ ++ Sbjct: 741 -------------HYDARGLLLRLENGNGA-AYQFGYDAVGRLVNEQRVDGVELTFHY 784 Score = 61.0 bits (146), Expect = 1e-07, Method: Composition-based stats. Identities = 71/486 (14%), Positives = 127/486 (26%), Gaps = 79/486 (16%) Query: 14 LYRYDRHGRLTEKTDLIPEGVIRT------------DDERTHRYHYDSQHRLVHYTRTQY 61 + YD G+L D R D R ++++ +L + Q Sbjct: 655 TFEYDHDGQLLASVDAEGHTTRREWDACGHLTSVIYPDGRRETLRWNARGQLQAWRDAQN 714 Query: 62 AEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTR 121 + E R+ Y+ LG+ V+ R + T + +D L + Sbjct: 715 S----EVRWHYNVLGQPVSVT--------------DRLRRTTRWHYDARGLLLRLENGNG 756 Query: 122 IQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLE 181 + + L+ + G + Q+S + G + + Sbjct: 757 AAYQFGYDAVGRLVNEQRVDGVELTFHYDAAGHLCQRS--QRGHAANDEAISHIYQHDAA 814 Query: 182 SEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPAR------KIHL------------ 223 +++ + + + + ++ + ++ Sbjct: 815 GQLVRREHAHAVFHYQHNNRGQLLSLKREPTGEGLALGLTADEVRLTYDAAGDLSGEHGS 874 Query: 224 -----YHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLI-RLPGQQYDEE 277 Y D G AL +G T Y G++ + HQ+ R + Sbjct: 875 EGDIGYTRDALGNVSALSLPDGDTLRWLRYGS-GHVSAVKFNHQVVSEFTRDRLHREISR 933 Query: 278 SGLYYNRHRYYDPLQGRYITQDPIGLKGGWNFYQYPLNPVQYIDSMGLASKYGHLNNGGY 337 + + R YD GR +Q GL P Q L S+ G Sbjct: 934 TQGRRTQQRAYD-SLGRLTSQ-RSGLWD-------VAEPEQQ-----LLSRALRYTASGE 979 Query: 338 GARPNKPPTPDPSKLPDIAKQLRLPYPIDQASSAPNVFKTFFRALSPYDYTLYCRKWVKP 397 A D D +L + L Y+ R Sbjct: 980 LASVRDSLRGDVQYDYDAEGRLLKRIDVHWQVHHRAYGYDAADNLQDSAYSPSARPLSDN 1039 Query: 398 NLTCTPQDDSQYPGMDTKTASDYLPQTNWPTTQLPPGYTCAEPYLFPDINKPDGPATA-- 455 L +QY G + + + T Q Y + P G A Sbjct: 1040 RLLNWRHLWNQYDGQ-----GNLIRRREGTTEQF-YQYDADNRLVEARGRGPQGEFVARY 1093 Query: 456 GIDDLG 461 G D LG Sbjct: 1094 GYDALG 1099 Score = 59.1 bits (141), Expect = 4e-07, Method: Composition-based stats. Identities = 38/279 (13%), Positives = 74/279 (26%), Gaps = 31/279 (11%) Query: 5 NRIARDAH-----YLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRT 59 R+ + + YD G L +++ G D+ +H Y +D+ +LV Sbjct: 767 GRLVNEQRVDGVELTFHYDAAGHLCQRS---QRGHAANDEAISHIYQHDAAGQLVRREHA 823 Query: 60 QYAEPLVESRYLYDPLGRRVA-KRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQND 118 Y ++ G+ ++ KR E G L+ Y GD L+ Sbjct: 824 H-----AVFHYQHNNRGQLLSLKREPTGEGLALG---LTADEVRLTYDAAGD-LSGEHGS 874 Query: 119 RTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLAD----TLQQSGGEDGGSVVFPPVLV 174 I Y + + + G+ + R + + Sbjct: 875 EGDI--GYTRDALGNVSALSLPDGDTLRWLRYGSGHVSAVKFNHQVVSEFTRDRLHREIS 932 Query: 175 QMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCD-HRGLPL 233 + R + D + + + + + Q + A D RG Sbjct: 933 RTQGRRTQQRAYDSLGRLTSQRSGLWDVAEPEQQLLSRALRYTASGELASVRDSLRGDVQ 992 Query: 234 ALVSTEGATE------WCAEYDEWGNLLNEENPHQLQQL 266 EG W + +G + Sbjct: 993 YDYDAEGRLLKRIDVHWQVHHRAYGYDAADNLQDSAYSP 1031 Score = 46.0 bits (107), Expect = 0.003, Method: Composition-based stats. Identities = 35/237 (14%), Positives = 67/237 (28%), Gaps = 18/237 (7%) Query: 18 DRHGR-LT-EKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYLYDPL 75 D GR LT D + V + Y Y++Q +L+ T V R+ + Sbjct: 390 DSAGRHLTCRYRDGRLDSVWLDESTCLVHYTYNAQRQLITVTGR---GGSVRRRFTWHDD 446 Query: 76 GRRVAKRVWRRERDLTGWMSLSRKPQVTWY-GWDGDRLTTIQNDRTRIQTIYQPGSFTPL 134 G + W ++ P+V Y G++LT + + +T + Sbjct: 447 GLMASHEEASGLLSEYQWQEIADLPRVVAYRNSAGEQLTLEYDFAGQRRTARREDGLIAQ 506 Query: 135 IRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVS---E 191 ++ T TL + GE ++ + +L++ E Sbjct: 507 WLLDDEGHVTHFTDYDGRETTLSYADGELCDVIMPGGASRKTTWDDYGRLLSETDPLGRE 566 Query: 192 ESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWCAEY 248 +W G D + + G + +Y Sbjct: 567 TCYQWYRLTGHITLVTYPDGSREQMQ--------YDDLNRLVEEIDARGNST-RYQY 614 >UniRef50_Q13ML3 YD repeat protein n=10 Tax=Proteobacteria RepID=Q13ML3_BURXL Length = 1531 Score = 226 bits (575), Expect = 2e-57, Method: Composition-based stats. Identities = 96/410 (23%), Positives = 145/410 (35%), Gaps = 45/410 (10%) Query: 6 RIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPL 65 R YD +GRL + + D YHYD+ RLV + Sbjct: 1059 RSQGKLDTRSLYDVNGRLARRQSYRGMNGVVPDRVIDRGYHYDALDRLVSKRHSL----Q 1114 Query: 66 VESRYLYDPLGR------------------------RVAKRVWRRERDLTGWMSLSRKPQ 101 ++ Y YD GR R RV + ++ R + Sbjct: 1115 QQTVYRYDDSGRISGCHNEAYWDTLQYDAAANLVEVRERARVKGEPAPVEREGNVVRFNR 1174 Query: 102 V-----TWYGWDGDRLTTIQNDRTRIQTIYQPGSFTPLIRV----ETATGELAKTQRRSL 152 V Y +D T + +Q Y+ + L+ V ++ Sbjct: 1175 VLRFRDRRYEYDAHGRTASRLTAAGLQ-RYRYDAEHRLVEVSIEQTGGPVRRYGYAYDAV 1233 Query: 153 ADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMD 212 + + + G + R+ E+ AD +L + + E + +D Sbjct: 1234 GRRVAKFAMDGDGQPFGRTRFLWDGMRMVQEVRADGADSL---YLYNGEGSYEPVAR-ID 1289 Query: 213 PVYTPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPH--QLQQLIRLP 270 I+ YH D G P L S +G W A Y WGN + E P ++Q +R Sbjct: 1290 GRNGLGHSIYYYHTDINGAPEELTSADGRIVWQAMYQLWGNTVRESEPESYAVRQNLRYQ 1349 Query: 271 GQQYDEESGLYYNRHRYYDPLQGRYITQDPIGLKGGWNFYQYPLNPVQYIDSMGLASKYG 330 GQ D E+GL+YN RYYDP GR+ T DPIGL GG N Y+Y NP+ +ID MGL+ Sbjct: 1350 GQYLDRETGLHYNTLRYYDPDIGRFTTPDPIGLAGGVNLYRYAPNPMSWIDPMGLSCTSN 1409 Query: 331 HLNNGGYGARPNKPP-TPDPSKLPDIAKQLRLPYPIDQASSAPNVFKTFF 379 + +R T + + P + + N F Sbjct: 1410 LKDIENQLSRGKGATVTVSSKAEAEELLRAYTSGPAGRRGAFRNTTGQEF 1459 Score = 82.2 bits (201), Expect = 4e-14, Method: Composition-based stats. Identities = 44/283 (15%), Positives = 75/283 (26%), Gaps = 28/283 (9%) Query: 8 ARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERT------------HRYHYDSQHRLVH 55 AR R++ G+L+ TD D R RY D+ RLV Sbjct: 758 ARGGERHLRWNEDGQLSSHTDCSGSVTAFYYDARGALECVTNAEGDCTRYRRDALGRLVT 817 Query: 56 YTRTQYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMS-------LSRKPQVTWYGWD 108 E R+ D GR + + + +D Sbjct: 818 MVHPDG----REERFTVDAAGRLLTHTDASGRTTRYQRDRRGLVQARIDGAGHRVGFEYD 873 Query: 109 GDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVV 168 + + + + L R G +T +L G + + Sbjct: 874 SYGRLLALVNENGERYGFAYDAKNRLTRQTDLDGRRQETDYDALDQVAAVRYAAGGDAQI 933 Query: 169 FPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDH 228 L RL D + + + G + + + D ++ + D Sbjct: 934 EHTFGRDALGRLIGRYTPDAI---TFHDYDASGNLLTISRKRHDAPRKRDVEVIAFRYDR 990 Query: 229 RGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRLPG 271 G L +++G EYD GN + P G Sbjct: 991 LGRLLEEATSQGKL--RHEYDVLGNRIATTLPDGRTINHLYYG 1031 Score = 74.1 bits (180), Expect = 1e-11, Method: Composition-based stats. Identities = 52/295 (17%), Positives = 86/295 (29%), Gaps = 32/295 (10%) Query: 5 NRIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEP 64 R DA + YD G L + + + D E + YD RL+ +Q Sbjct: 947 GRYTPDAITFHDYDASGNLLTISRKRHDAPRKRDVEVI-AFRYDRLGRLLEEATSQG--- 1002 Query: 65 LVESRYLYDPLGRRVAKRVWRRERDLTGWMSLS-----RKPQVTWYGWDGDRLTTIQ-ND 118 + R+ YD LG R+A + + T + DRL Sbjct: 1003 --KLRHEYDVLGNRIATTLPDGRTINHLYYGSGHLHQINVDGETVSDFQRDRLHREVLRS 1060 Query: 119 RTRIQTIYQPGSFTPLIRVET--------ATGELAKTQRRSLADTLQQSGGEDGGSVVFP 170 + ++ T L R ++ + + D L V+ Sbjct: 1061 QGKLDTRSLYDVNGRLARRQSYRGMNGVVPDRVIDRGYHYDALDRLVSKRHSLQQQTVYR 1120 Query: 171 PV---------LVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKI 221 D L+ + A+ V R + VE+ N + + Sbjct: 1121 YDDSGRISGCHNEAYWDTLQYDAAANLVEVRERARVKGEPAPVEREGNVVRFNRVLRFRD 1180 Query: 222 HLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQYDE 276 Y D G + ++ G YD + L E + Q +R G YD Sbjct: 1181 RRYEYDAHGRTASRLTAAG--LQRYRYDA-EHRLVEVSIEQTGGPVRRYGYAYDA 1232 Score = 64.4 bits (155), Expect = 8e-09, Method: Composition-based stats. Identities = 46/309 (14%), Positives = 84/309 (27%), Gaps = 54/309 (17%) Query: 1 MWPDNRIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLV------ 54 ++ ++ RD YRYD G L E + DD ++ YD+ HR+V Sbjct: 532 LYGEDLQQRDVLVRYRYDADGNLAEVRN--------RDDTILRQFAYDAGHRMVMHRLPA 583 Query: 55 ---------HYTRTQYAEPLVESRYL-----Y--------------DPLGRRVAKRVWRR 86 + E V + Y D LGR + Sbjct: 584 GMECHYGWGRFDGPDGEEWRVVEHWTDTGEHYWLDYQIEARTLRVRDSLGR---STFRQW 640 Query: 87 ERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAK 146 + V+ + W +R D + + V G + + Sbjct: 641 DELYQITCFEDELGHVSRFEWSRERQLLAVTDAKGGVWRWDYDEAGRVSAVTDPLGRVEQ 700 Query: 147 TQRRSLADTLQQSGGEDGGSVVFPPVLVQ----MLDRLESEILADRVSEESRRWLASCGL 202 TQ + G + +D L L R + + Sbjct: 701 TQWHPVWALPTLEADTGGNTWRHFYDERGNRIVTIDPLMQRTLYHRDAHGQVMMITDARG 760 Query: 203 TVEQMQNQMDPVYTP----ARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEE 258 ++ D + + + ++ D RG + + EG D G L+ Sbjct: 761 GERHLRWNEDGQLSSHTDCSGSVTAFYYDARGALECVTNAEGDCT-RYRRDALGRLVTMV 819 Query: 259 NPHQLQQLI 267 +P ++ Sbjct: 820 HPDGREERF 828 Score = 60.2 bits (144), Expect = 1e-07, Method: Composition-based stats. Identities = 39/269 (14%), Positives = 73/269 (27%), Gaps = 55/269 (20%) Query: 8 ARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVE 67 A+ + + YD GR++ TD + + Sbjct: 673 AKGGVWRWDYDEAGRVSAVTDPLGRVEQTQWHPVW------------ALPTLEADTGGNT 720 Query: 68 SRYLYDPLGRRV-------AKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRT 120 R+ YD G R+ + ++ R+ M + W+ D + D + Sbjct: 721 WRHFYDERGNRIVTIDPLMQRTLYHRDAHGQVMMITDARGGERHLRWNEDGQLSSHTDCS 780 Query: 121 RIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRL 180 T + + L V A G+ + +R +L + + ++L Sbjct: 781 GSVTAFYYDARGALECVTNAEGDCTRYRRDALGRLVTMVHPDGREERFTVDAAGRLLTHT 840 Query: 181 ESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEG 240 + + + Y D RGL A + G Sbjct: 841 D-----------------------------------ASGRTTRYQRDRRGLVQARIDGAG 865 Query: 241 ATEWCAEYDEWGNLLNEENPHQLQQLIRL 269 EYD +G LL N + + Sbjct: 866 HRVG-FEYDSYGRLLALVNENGERYGFAY 893 Score = 51.0 bits (120), Expect = 9e-05, Method: Composition-based stats. Identities = 46/306 (15%), Positives = 88/306 (28%), Gaps = 40/306 (13%) Query: 23 LTEKTDLIPEGVIRTDDERTHRYHYDSQH----RLVHYTRTQYAEPLVESRYLYDPLGRR 78 L+ + ++ +D+ + D + RL+ + R Y+ GR Sbjct: 446 LSVRRSAAGHWLVESDEGLYRVFEPDPHNAERQRLLQLSDRNRN----ALRLHYNDAGRL 501 Query: 79 VAKRVWRRER-DLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQPGSFTPLIRV 137 A + + +V+ RL + + Y+ + L V Sbjct: 502 EAIADSTGHQCVRLHYEEPVHPYRVSRLE----RLYGEDLQQRDVLVRYRYDADGNLAEV 557 Query: 138 ETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSEESRRWL 197 + + + G + D E ++ WL Sbjct: 558 RNRDDTILRQFAYDAGHRMVMHRLPAGMECHYGWGRFDGPDGEEWRVVEHWTDTGEHYWL 617 Query: 198 AS--CGLTVEQMQNQMDPVYTPARKIHLYHC--DHRGLPL-----------ALVSTEGAT 242 T+ + + +++ C D G A+ +G Sbjct: 618 DYQIEARTLRVRDSLGRSTFRQWDELYQITCFEDELGHVSRFEWSRERQLLAVTDAKGG- 676 Query: 243 EWCAEYDEWGNLLNEENP------HQLQQLIRLPGQQYDEESGLYYNRHR-YYDPLQGRY 295 W +YDE G + +P Q + LP + D +G N R +YD R Sbjct: 677 VWRWDYDEAGRVSAVTDPLGRVEQTQWHPVWALPTLEAD--TG--GNTWRHFYDERGNRI 732 Query: 296 ITQDPI 301 +T DP+ Sbjct: 733 VTIDPL 738 >UniRef50_B2HXH5 Rhs family protein n=5 Tax=Acinetobacter baumannii RepID=B2HXH5_ACIBC Length = 1635 Score = 225 bits (574), Expect = 2e-57, Method: Composition-based stats. Identities = 93/386 (24%), Positives = 129/386 (33%), Gaps = 80/386 (20%) Query: 4 DNRIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAE 63 +N + Y+YD G+L + + + +D RLV Sbjct: 1221 NNIVQEYLDQQYQYDAFGQLIRQKSSQGDLNL----------EWDVFGRLVRSR-----N 1265 Query: 64 PLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQ 123 + Y YD LGRR+ KR + + Q YGWDGD L + Sbjct: 1266 NQYTAEYRYDALGRRIQKRSKHHH---------TGQEQNISYGWDGDTLAYESSADLTKH 1316 Query: 124 TIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESE 183 Y+ SF PL++ L Q+ + + + Sbjct: 1317 YFYEKDSFVPLLQA-----------AYHHPIELHQTQDWSDKTYSIYKDPLWNTVKQSQG 1365 Query: 184 ILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATE 243 + YHCDH G P + GA Sbjct: 1366 F----------------------------------DDVWFYHCDHLGTPQEMSDQTGAII 1391 Query: 244 WCAEYDEWGNLLNEENPHQL-------QQLIRLPGQQYDEESGLYYNRHRYYDPLQGRYI 296 W AEY WG E+ IR GQ +DEE+GL+YNR+RYY P GR+I Sbjct: 1392 WKAEYKAWGECKLEQTNSDFFEKSEIISNNIRFQGQYFDEETGLHYNRYRYYSPYVGRFI 1451 Query: 297 TQDPIGLKGGWNFYQYPLNPVQYIDSMGLASKYGHLNNGGYGARPNKPPTPDPSKLPDIA 356 ++DPIGL GG+N Y Y NPVQ++D GLA Y P D A Sbjct: 1452 SKDPIGLLGGFNVYAYTANPVQWVDPYGLAPCSLV----RYKPDKVTPQAGSRQDAIDRA 1507 Query: 357 KQLRLPYPIDQASSAPNVFKTFFRAL 382 L + + K + Sbjct: 1508 WSLEKQLIQTTGTGTRDWSKAELDTI 1533 Score = 74.8 bits (182), Expect = 6e-12, Method: Composition-based stats. Identities = 55/312 (17%), Positives = 89/312 (28%), Gaps = 61/312 (19%) Query: 8 ARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVE 67 Y YD G + D T Y YD + L+ + + E Sbjct: 673 TDGTETSYTYDERGNVLSMVQA---------DGSTFYYEYDEKDNLIGFVDAEQGRWFKE 723 Query: 68 SRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQ 127 YD G + + + T Y ++ L T D + + Sbjct: 724 ----YDASGNIIK--------------EIDPLKRETVYAYNAMGLVTSITDAKGGKKTLK 765 Query: 128 PGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILAD 187 LI +G+ K ++ + + E Sbjct: 766 YDDRGNLISYTDCSGKETKWHYDDRGR----------------VKFIENALKQKVEYFYT 809 Query: 188 RVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWCAE 247 ++ E R+ +A GL + + + H H D G L + +G E Sbjct: 810 ELTTELRQPIAK-GLPLNAFGQLEKIKHADGAEEHFIH-DAEGRLLVHIDPKGQQT-RYE 866 Query: 248 YDEWGNLLNEENPHQLQQLIRLPGQQYDEESGL----YYNRHRY---YDPLQGRYITQDP 300 YD G + +P L Q ++ +D S L N Y YD GR + + Sbjct: 867 YDAAGLITKRTDP--LNQTLKYQ---WDRLSRLKRLINENGASYEFVYDAA-GRLVKE-- 918 Query: 301 IGLKGGWNFYQY 312 I G Y Y Sbjct: 919 IDFDGKETVYAY 930 Score = 70.2 bits (170), Expect = 2e-10, Method: Composition-based stats. Identities = 35/264 (13%), Positives = 71/264 (26%), Gaps = 37/264 (14%) Query: 10 DAHYLYRYDRHGRLTEKTDLIPEGVIRT------------DDERTHRYHYDSQHRLVHYT 57 Y YD G +T++TD + + + ++ ++ + YD+ RLV Sbjct: 860 GQQTRYEYDAAGLITKRTDPLNQTLKYQWDRLSRLKRLINENGASYEFVYDAAGRLVKEI 919 Query: 58 RTQYAEPLVESRYLYDP-LGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQ 116 E + Y YD GR + K ++ + +D + Sbjct: 920 DFDGKETV----YAYDEYNGRLTTSIEVASTYGQDFKDRAAPKDRIQQFIFDSMGRLEQR 975 Query: 117 NDRTR---------IQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSV 167 + L++ + A L + + + +++ + Sbjct: 976 TAGYGYQGQELEEKQTEEFSYDGLGNLVQAKNAETNL-QWFYDAAGNLIKEHHQDVVTQK 1034 Query: 168 VFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPAR------KI 221 V D L + R + WL+ V M + V + R + Sbjct: 1035 TAVWKHVY--DELNNRTTTIRPDGQKIDWLSYGSGHVYGMALNGEDVVSFERDDLHRETL 1092 Query: 222 HLYHCDHRGLPLALVSTEGATEWC 245 Y G Sbjct: 1093 RHYANGL--SQQQSYDEVGRLTQQ 1114 Score = 68.3 bits (165), Expect = 5e-10, Method: Composition-based stats. Identities = 43/283 (15%), Positives = 80/283 (28%), Gaps = 38/283 (13%) Query: 12 HYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYH--------YDSQHRLVHYTRTQYAE 63 + YD GR+ + + + V E T ++ +L A Sbjct: 782 ETKWHYDDRGRVKFIENALKQKVEYFYTELTTELRQPIAKGLPLNAFGQLEKIKHADGA- 840 Query: 64 PLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQ 123 E +++D GR + + K Q T Y +D L T + D Sbjct: 841 ---EEHFIHDAEGRLLVH--------------IDPKGQQTRYEYDAAGLITKRTDPLNQT 883 Query: 124 TIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESE 183 YQ + L R+ G + + +++ + +V L Sbjct: 884 LKYQWDRLSRLKRLINENGASYEFVYDAAGRLVKEIDFDGKETVYAYDEYNGRLTTSIEV 943 Query: 184 ILADRVS----------EESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPL 233 + + + L ++ + D G + Sbjct: 944 ASTYGQDFKDRAAPKDRIQQFIFDSMGRLEQRTAGYGYQGQELEEKQTEEFSYDGLGNLV 1003 Query: 234 ALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQYDE 276 + E +W YD GNL+ E + + Q + YDE Sbjct: 1004 QAKNAETNLQWF--YDAAGNLIKEHHQDVVTQKTAVWKHVYDE 1044 Score = 63.7 bits (153), Expect = 1e-08, Method: Composition-based stats. Identities = 44/292 (15%), Positives = 77/292 (26%), Gaps = 55/292 (18%) Query: 9 RDAHYLYRYDRHGRLTEKTDLIPEGVIRTDD---------------------------ER 41 A Y + YD GRL ++ D + + D +R Sbjct: 901 NGASYEFVYDAAGRLVKEIDFDGKETVYAYDEYNGRLTTSIEVASTYGQDFKDRAAPKDR 960 Query: 42 THRYHYDSQHRLVHYTRTQYAEPL-----VESRYLYDPLGRRVAKRVWRRERDLTGWMSL 96 ++ +DS RL T + + YD LG V + Sbjct: 961 IQQFIFDSMGRLEQRTAGYGYQGQELEEKQTEEFSYDGLGNLVQAKNA------------ 1008 Query: 97 SRKPQVTWYGWDGDRLTTIQND---RTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLA 153 +Y G+ + D + + G+ Sbjct: 1009 -ETNLQWFYDAAGNLIKEHHQDVVTQKTAVWKHVYDELNNRTTTIRPDGQKIDWLSYGSG 1067 Query: 154 DTLQQSGGEDG-----GSVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQ 208 + + + L + L + D V +++ + S Q Q Sbjct: 1068 HVYGMALNGEDVVSFERDDLHRETLRHYANGLSQQQSYDEVGRLTQQLMLSGHDKGYQAQ 1127 Query: 209 NQMDPVYTPARKI-HLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEEN 259 Q + + + I LYH D G + T +YD G LL + Sbjct: 1128 TQNNAIQHTNQLIERLYHYDKTGELTLIKDTRRGAI-HYKYDPVGRLLEATS 1178 Score = 58.7 bits (140), Expect = 5e-07, Method: Composition-based stats. Identities = 29/287 (10%), Positives = 70/287 (24%), Gaps = 39/287 (13%) Query: 2 WPDNRIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQY 61 + + + YD G L + + E ++ YD+ L+ Sbjct: 981 YQGQELEEKQTEEFSYDGLGNLVQ----------AKNAETNLQWFYDAAGNLIKEHHQDV 1030 Query: 62 AEP-LVESRYLYDPLGRRVA-------KRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLT 113 +++YD L R K W + V + D Sbjct: 1031 VTQKTAVWKHVYDELNNRTTTIRPDGQKIDWLSYGSGHVYGMALNGEDVVSFERDDLHRE 1090 Query: 114 TIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVL 173 T+++ + L + +G Q ++ + +Q + + Sbjct: 1091 TLRHYANGLSQQQSYDEVGRLTQQLMLSGHDKGYQAQTQNNAIQHTNQLIERLYHYDKTG 1150 Query: 174 V------------QMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYT---PA 218 +L + + + N + Sbjct: 1151 ELTLIKDTRRGAIHYKYDPVGRLLEATSKLGKETFNFDPASNILERYNSTKEQSSQHISD 1210 Query: 219 RKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQ 265 K + Y+ + + +YD +G L+ +++ Sbjct: 1211 EKGYGYNRLVNNIVQEYLD------QQYQYDAFGQLIRQKSSQGDLN 1251 >UniRef50_A7FDJ9 RHS/YD repeat protein n=30 Tax=Enterobacteriaceae RepID=A7FDJ9_YERP3 Length = 1418 Score = 225 bits (574), Expect = 2e-57, Method: Composition-based stats. Identities = 78/350 (22%), Positives = 130/350 (37%), Gaps = 33/350 (9%) Query: 13 YLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYLY 72 + +D G L+ TD I +Y YD++ RL + + V + Y Sbjct: 978 RKFSFDTAGELSMATDFIRG---------EQQYRYDAEGRLT--DSRERHQLSVAEDFAY 1026 Query: 73 DPLGRRVAKRVWRRERDLTGWMSLSRKPQVT-----WYGWDGDRLTTIQNDRTRIQTIYQ 127 D + R + + + ++T + +D T ++ R+Q + Sbjct: 1027 DNADNLLNLRKLPFDTVDPLYDTPVANNRLTQWQHYRFEYDAWGNMTTRHAGGRMQH-FA 1085 Query: 128 PGSFTPLIRV---ETATGELAKTQRRSLADTLQQSGG--EDGGSVVFPPVLVQMLDRLES 182 L+R + + +L + +S + RL Sbjct: 1086 YDDDNRLLRAWGTGPLGEHDSHYRYDALGRRIHKSVTIKRGAEKTTRQTDFIWQGLRLLQ 1145 Query: 183 EILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGAT 242 E AD + ++ + + +++ +H D G PL + EG Sbjct: 1146 EQHADGNA----TYIYDPNESYTPLARVDQRHGETESQVYYFHTDINGTPLDVTDGEGKH 1201 Query: 243 EWCAEYDEWGNLLNEENPHQ-------LQQLIRLPGQQYDEESGLYYNRHRYYDPLQGRY 295 W +Y WG + + Q +R PGQ D+E+GL+YN RYYDP GR+ Sbjct: 1202 RWSGKYHAWGKVTRQNVSDPRQSTVSRFAQPLRYPGQYSDDETGLHYNTFRYYDPEIGRF 1261 Query: 296 ITQDPIGLKGGWNFYQYPLNPVQYIDSMGLASKYGHLNNGGYGARPNKPP 345 TQDPIGL GG N YQY NP+ ++D +G + N G+ P Sbjct: 1262 STQDPIGLAGGINLYQYGPNPLGWVDPLGWMPWAWNPNGMGHHLIPRNKA 1311 Score = 59.8 bits (143), Expect = 2e-07, Method: Composition-based stats. Identities = 66/414 (15%), Positives = 113/414 (27%), Gaps = 68/414 (16%) Query: 13 YLYRYDRHGRLTEKTDLIPEGVIRTDD---------------ERTHRYHYDSQHRLVHYT 57 + YD G+L + + GV + RY Y+ QH+LV T Sbjct: 373 LYFSYDDIGQLKKISTTSGYGVYCQYEKGRLVSVACVKGGTPGTLVRYQYNEQHQLVSVT 432 Query: 58 RTQY-----------------AEPLVESRYLY-DPLG--RRVAKRVWRRERDLTGWMSLS 97 + +E RY + D G R E+ + + Sbjct: 433 NREGQITRQFGYHGHLINKLADVRGLECRYTWADIGGTPRITHSATNLGEQWQFDYDIDN 492 Query: 98 --------RKPQVTWYGWDGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQR 149 Q +G++ L T D + + +RV A Sbjct: 493 QQTTLTDLNTGQTACWGYNAQHLITDYRDFDGGKYAFDYNDLNMPVRVVLAGERTLVLAY 552 Query: 150 RSLADTLQ------QSGGEDGGSVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLT 203 +LA +Q + D + Q D + DR + G+T Sbjct: 553 DALARPIQITDPLKREIHIDYHRNSLRVMRRQYPDGQVWKGEYDRTGRLLKENAPDGGVT 612 Query: 204 VEQMQNQMDPVYTPARKI---HLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENP 260 + + + G G EYD G+LL + Sbjct: 613 RYHYPGASSLPERITNAVGAQTHFGWERHGQLTEHTDCSGKLT-RYEYDIDGHLLTVIDA 671 Query: 261 HQLQQLIRLP--GQQYDEESGLYYNRHR----YYDPL--QGRYITQDPIGLKGGWNFYQY 312 GQ +G+ Y R Y+ ++ DP+G + W Y Sbjct: 672 ENHATHYSYNRLGQL----TGVRYADGRKEQLRYNAQGLVEQFT--DPVGRQLHW-RYNL 724 Query: 313 PLNPVQYIDSMGLASKYGHLNNGGYGARPNKPPTPDPSKLPDIAKQLRLPYPID 366 PV + D + +Y + +G N + + + YP + Sbjct: 725 RGQPVSFTDRLQRQYRYRYDCHGQMIELDNANGGQYHFRWSSGGQLVEEQYPDN 778 Score = 58.7 bits (140), Expect = 5e-07, Method: Composition-based stats. Identities = 42/300 (14%), Positives = 78/300 (26%), Gaps = 41/300 (13%) Query: 13 YLYRYDRHGRLTEKT--DLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEP------ 64 Y Y+R G+LT D E + ++ D R +H+ +P Sbjct: 676 THYSYNRLGQLTGVRYADGRKEQLRYNAQGLVEQFT-DPVGRQLHWRYNLRGQPVSFTDR 734 Query: 65 -LVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQ 123 + RY YD G+ + + + W + + Sbjct: 735 LQRQYRYRYDCHGQMIE--------------LDNANGGQYHFRWSSGGQLVEEQYPDNLV 780 Query: 124 TIYQPGSFTPLIRVETAT--------GELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQ 175 Y+ G L+ +ET + Q+ G + + Sbjct: 781 RRYRYGESGMLMALETTAPTVDDLTVSRQVSFDYDAGGRMTQRLTGMSATRYDWDIMDRL 840 Query: 176 MLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLAL 235 +L + ++ + + D Y D AL Sbjct: 841 LLAERVPTAVGEQAGIVGHGVRLAYDKAGHLLTESGDLGAVT------YQWDPLHHLAAL 894 Query: 236 VSTEGATEWCAEYDEWGNLLNEENPHQLQQLI-RLPGQQYDEESGLYYNRHRYYDPLQGR 294 +G T Y G++ + L R + + ++R YD GR Sbjct: 895 TLPDGQTLSWLRYGA-GHVSAIRHGDTLISEFSRDNLHREVSRTQGILTQYRDYD-AMGR 952 Score = 57.5 bits (137), Expect = 1e-06, Method: Composition-based stats. Identities = 38/264 (14%), Positives = 75/264 (28%), Gaps = 35/264 (13%) Query: 5 NRIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEP 64 +R+ R Y YRYD HG++ E + + + + + S +LV Sbjct: 733 DRLQR--QYRYRYDCHGQMIELDNA---------NGGQYHFRWSSGGQLVEEQYPDN--- 778 Query: 65 LVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQT 124 + RY Y G +A D + + +D T + Sbjct: 779 -LVRRYRYGESGMLMALETTAPTVDDLT------VSRQVSFDYDAGGRMTQRLTGMSAT- 830 Query: 125 IYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPV---LVQMLDRLE 181 Y L+ E + + Q + ++ + + G + + D L Sbjct: 831 RYDWDIMDRLLLAERVPTAVGE-QAGIVGHGVRLAYDKAGHLLTESGDLGAVTYQWDPLH 889 Query: 182 SEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGA 241 ++ WL V +++ + +R + T+G Sbjct: 890 HLAALTLPDGQTLSWLRYGAGHVSAIRHGDTLISEFSRDNLH---------REVSRTQGI 940 Query: 242 TEWCAEYDEWGNLLNEENPHQLQQ 265 +YD G L + Sbjct: 941 LTQYRDYDAMGRRLWQSAGSDAPT 964 Score = 51.3 bits (121), Expect = 7e-05, Method: Composition-based stats. Identities = 39/244 (15%), Positives = 61/244 (25%), Gaps = 47/244 (19%) Query: 16 RYDRHGRLTEKTDLIPEG-------------VIRTDDERTHRYHYDSQHRLVHYTRTQYA 62 YD R + TD + + D + + YD RL+ Sbjct: 551 AYDALARPIQITDPLKREIHIDYHRNSLRVMRRQYPDGQVWKGEYDRTGRLLKENAPDGG 610 Query: 63 EPLVESRYLY-----------DPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDR 111 +RY Y + +G A+ + ER ++T Y +D D Sbjct: 611 ----VTRYHYPGASSLPERITNAVG---AQTHFGWERHGQLTEHTDCSGKLTRYEYDIDG 663 Query: 112 LTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQR----------RSLADTLQQSGG 161 D T Y L V A G + + + L Sbjct: 664 HLLTVIDAENHATHYSYNRLGQLTGVRYADGRKEQLRYNAQGLVEQFTDPVGRQLHWRYN 723 Query: 162 EDGGSVVFP------PVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVY 215 G V F E+ + RW + L EQ + + Y Sbjct: 724 LRGQPVSFTDRLQRQYRYRYDCHGQMIELDNANGGQYHFRWSSGGQLVEEQYPDNLVRRY 783 Query: 216 TPAR 219 Sbjct: 784 RYGE 787 Score = 51.3 bits (121), Expect = 8e-05, Method: Composition-based stats. Identities = 41/272 (15%), Positives = 59/272 (21%), Gaps = 49/272 (18%) Query: 39 DERTHRYHYDSQ--------------------HRLVHYTRTQYAEPLVESRYLYDPLGRR 78 + + YD RLV + P RY Y+ + Sbjct: 369 NGHALYFSYDDIGQLKKISTTSGYGVYCQYEKGRLVSVACVKGGTPGTLVRYQYNEQHQL 428 Query: 79 VAKRVWRRERD-------LTGWMSLSRKPQVTWYGWD---GDRLTTIQNDRTRIQTIYQP 128 V+ + + Y W G T Q + Sbjct: 429 VSVTNREGQITRQFGYHGHLINKLADVRGLECRYTWADIGGTPRITHSATNLGEQWQFDY 488 Query: 129 GSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADR 188 + + + DGG F + Sbjct: 489 DIDNQQTTLTDLNTGQTACWGYNAQHLITDYRDFDGGKYAFDY---------------ND 533 Query: 189 VSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCD-HRGLPLAL--VSTEGATEWC 245 ++ R LA V P+ H D HR + +G W Sbjct: 534 LNMPVRVVLAGERTLVLAYDALARPIQITDPLKREIHIDYHRNSLRVMRRQYPDGQ-VWK 592 Query: 246 AEYDEWGNLLNEENPHQLQQLIRLPGQQYDEE 277 EYD G LL E P PG E Sbjct: 593 GEYDRTGRLLKENAPDGGVTRYHYPGASSLPE 624 Score = 47.9 bits (112), Expect = 8e-04, Method: Composition-based stats. Identities = 42/289 (14%), Positives = 70/289 (24%), Gaps = 47/289 (16%) Query: 7 IARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLV------HYTRTQ 60 + + YD GR+T++ + RY +D RL+ Q Sbjct: 804 LTVSRQVSFDYDAGGRMTQRLTGMSAT----------RYDWDIMDRLLLAERVPTAVGEQ 853 Query: 61 YAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRT 120 R YD G + + W L +T DG L+ ++ Sbjct: 854 AGIVGHGVRLAYDKAGHLLTESGDLGAVTY-QWDPLHHLAALTL--PDGQTLSWLRYGAG 910 Query: 121 RIQTIYQPG------SFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLV 174 + I S L R + T + R A + + L+ Sbjct: 911 HVSAIRHGDTLISEFSRDNLHREVSRTQGILTQYRDYDAMGRRLWQSAGSDAPTVAADLL 970 Query: 175 QMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVY-------TPARKIHLYHCD 227 + + D E S G + + + A + D Sbjct: 971 PRQGDIWRKFSFDTAGELSMATDFIRGEQQYRYDAEGRLTDSRERHQLSVAEDFAYDNAD 1030 Query: 228 HR--------GLPLALVS---TEGATEW----CAEYDEWGNLLNEENPH 261 + L EYD WGN+ Sbjct: 1031 NLLNLRKLPFDTVDPLYDTPVANNRLTQWQHYRFEYDAWGNMTTRHAGG 1079 >UniRef50_Q1LDW7 YD repeat n=2 Tax=Burkholderiaceae RepID=Q1LDW7_RALME Length = 1626 Score = 225 bits (573), Expect = 3e-57, Method: Composition-based stats. Identities = 93/357 (26%), Positives = 130/357 (36%), Gaps = 58/357 (16%) Query: 4 DNRIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTR----- 58 N + + Y +D +G L +T+ + T Y YD+ +RL R Sbjct: 1190 GNVLRELSRTRYAHDAYGNLVRRTE---------PNGVTWLYQYDAANRLERADRYATPP 1240 Query: 59 -------------------TQYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRK 99 EP ++ R+LYD GRR K V R + Sbjct: 1241 PAEALKRIERTPDGVLHAFPARVEPDMQVRFLYDAFGRRTLKAVERAG-----------R 1289 Query: 100 PQVTWYGWDGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQS 159 + T++ WDGD L + + P + P+ + + TL QS Sbjct: 1290 LERTFFTWDGDVLLMEERFLQAKPQAFTPHEYQPIPVIREHPEDAHSVPVAQRQHTLAQS 1349 Query: 160 GGEDGGSVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPAR 219 G S+ + D D E Q+ Sbjct: 1350 HQWQGASL-----YLHEPDSFVPLARLDETLVEPAFMATGTDGRYVQV------PAKSRH 1398 Query: 220 KIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGN---LLNEENPHQLQQLIRLPGQQYDE 276 Y DH G P LV G W A Y WG +P + IR PGQ +D Sbjct: 1399 ATLFYLNDHLGTPQELVDESGKVVWLARYKAWGGLKTPRKSTDPTETTNAIRFPGQYHDV 1458 Query: 277 ESGLYYNRHRYYDPLQGRYITQDPIGLKGGWNFYQYPLNPVQYIDSMGLASKYGHLN 333 E+GL+YNRHRYYDP GR+I++DP+GL GG N Y Y NPV ++D +GL Sbjct: 1459 ETGLHYNRHRYYDPGSGRFISKDPVGLAGGINVYTYAPNPVGWVDPLGLRCDSPADK 1515 Score = 89.1 bits (219), Expect = 4e-16, Method: Composition-based stats. Identities = 45/260 (17%), Positives = 88/260 (33%), Gaps = 44/260 (16%) Query: 4 DNRIARDAH-----YLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTR 58 R+ Y YD +G L ++ D + + Y +D+ +L+ T Sbjct: 738 GGRLTCVQDCSGHETRYSYDANGFLLQRIDA---------EGHSTGYRHDASGQLLTRTH 788 Query: 59 TQYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQND 118 + E R+ YD G A QVT Y ++ T++ D Sbjct: 789 PDKS----EERFTYDHEGNLTA--------------YTDAAGQVTEYSYNARHQPTLRRD 830 Query: 119 RTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLD 178 + Y L R++ GE + ++ ++Q+G F VQ Sbjct: 831 AAGRELWYFYDKQWRLARLQNEAGEATRFTYDAVGQLVKQTG--------FDDRTVQYAY 882 Query: 179 RLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVST 238 ++ E + + + + + + + + +H D +G + +T Sbjct: 883 DAAGRLVGTVEGEMRTDYERDPLGRLTRRSVRAEGLRSSVDE--HFHYDAQG--RLVTAT 938 Query: 239 EGATEWCAEYDEWGNLLNEE 258 G + YD+ GNL+ E+ Sbjct: 939 SGVSTVHLHYDDAGNLVAEQ 958 Score = 85.2 bits (209), Expect = 5e-15, Method: Composition-based stats. Identities = 49/285 (17%), Positives = 77/285 (27%), Gaps = 33/285 (11%) Query: 4 DNRI-----ARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTR 58 NRI + + +D H + T+ + + R+ YD Q R T Sbjct: 612 HNRIVMVEHPDGSSERFEWDDHNNVVGVTNA---------EGQVQRFAYDEQGRATAVTD 662 Query: 59 TQYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSR-------KPQVTWYGWDGDR 111 E YD G V E T + L ++T Y W G Sbjct: 663 ALGNTTRTE----YDAAGLPVKVTAPTGEVTQTAYDELGHPVSVTDPAGRMTQYAWSGAG 718 Query: 112 LTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPP 171 L D + L V+ +G + + LQ+ E + Sbjct: 719 LLLALTDPKGGVQTFTYDHGGRLTCVQDCSGHETRYSYDANGFLLQRIDAEGHSTGYRHD 778 Query: 172 VLVQMLDRL-----ESEILADRVSEESRRWLASCGLTVEQMQNQMDPV--YTPARKIHLY 224 Q+L R E D + A+ +T + P A + Y Sbjct: 779 ASGQLLTRTHPDKSEERFTYDHEGNLTAYTDAAGQVTEYSYNARHQPTLRRDAAGRELWY 838 Query: 225 HCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRL 269 D + L + G YD G L+ + Sbjct: 839 FYDKQWRLARLQNEAGEAT-RFTYDAVGQLVKQTGFDDRTVQYAY 882 Score = 78.7 bits (192), Expect = 4e-13, Method: Composition-based stats. Identities = 42/280 (15%), Positives = 70/280 (25%), Gaps = 34/280 (12%) Query: 6 RIARDAH-----YLYRYDRHGRLTEKT-----------DLIPEGVIRTDDERTHRYHYDS 49 R+AR + + YD G+L ++T D V + E Y D Sbjct: 845 RLARLQNEAGEATRFTYDAVGQLVKQTGFDDRTVQYAYDAAGRLVGTVEGEMRTDYERDP 904 Query: 50 QHRLVHYT-RTQYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWD 108 RL + R + V+ + YD GR V L + + + YG Sbjct: 905 LGRLTRRSVRAEGLRSSVDEHFHYDAQGRLVTATSGVSTVHLHYDDAGNLVAEQQRYGSA 964 Query: 109 GDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLAD----TLQQSGGEDG 164 G T+ ++ + R R L D Sbjct: 965 GSGYVTVS--------RHEYDALGHRTRTTLPNTRTVDWLRYGSGHLHGVQLDGQALLDV 1016 Query: 165 GSVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLY 224 + + D R + + G + + + R+ Sbjct: 1017 ERDGLHREVARQHRGWRQTRAYDVNGRLDRIAVHA-GTGEGKGNIDVPGAWIAQRQFLYS 1075 Query: 225 HCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQ 264 H YD G LL +P + Sbjct: 1076 QTGHLARIQ----DHARGVTDYTYDPVGRLLKAVSPDLTE 1111 Score = 70.6 bits (171), Expect = 1e-10, Method: Composition-based stats. Identities = 75/461 (16%), Positives = 120/461 (26%), Gaps = 67/461 (14%) Query: 16 RYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVES--RYLYD 73 YD HG L T + R Y + R+ R + + RY YD Sbjct: 462 SYDNHGNLIGMTGGAEATI---------RLDY-VEGRVSAIHRVDLNGDIQLTLARYRYD 511 Query: 74 PLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRL--------------------- 112 G V ++ Q T + + L Sbjct: 512 RAGDLVRHENVLGHTRSFAYVQ-HLLTQYTDFNGNAHHLEWSWPGRAHGLPAPADAKCVR 570 Query: 113 --TTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFP 170 D R T ++ +V A G QR + + DG S F Sbjct: 571 TWIGKHADDPREDTRFEYHREHWYTKVTDADG-GITYQRYDYHNRIVMVEHPDGSSERFE 629 Query: 171 PVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRG 230 D + + + R G + T D G Sbjct: 630 WD-----DHNNVVGVTNAEGQVQRFAYDEQGRATAVTDALGNTTRTE--------YDAAG 676 Query: 231 LPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRLPG-----QQYDEESGLYYNRH 285 LP+ + + G A YDE G+ ++ +P G D + G+ Sbjct: 677 LPVKVTAPTGEVTQTA-YDELGHPVSVTDPAGRMTQYAWSGAGLLLALTDPKGGVQTFT- 734 Query: 286 RYYDPLQGRYIT-QDPIGLKGGWNFYQYPLNP--VQYIDSMGLASKYGHLNNGGYGARPN 342 YD GR QD G + Y Y N +Q ID+ G ++ Y H +G R + Sbjct: 735 --YDHG-GRLTCVQDCSGHET---RYSYDANGFLLQRIDAEGHSTGYRHDASGQLLTRTH 788 Query: 343 KPPTPDPSKLPDIAKQLRLPYPIDQASSAP-NVFKTFFRALSPYDYTLYCRKWVKPNLTC 401 + + Q + N L+ + L Sbjct: 789 PDKSEERFTYDHEGNLTAYTDAAGQVTEYSYNARHQPTLRRDAAGRELWYFYDKQWRLAR 848 Query: 402 TPQDDSQYPGMDTKTASDYLPQTNWPTTQLPPGYTCAEPYL 442 + + + QT + + Y A + Sbjct: 849 LQNEAGEATRFTYDAVGQLVKQTGFDDRTVQYAYDAAGRLV 889 >UniRef50_C5CZG8 RHS protein n=1 Tax=Variovorax paradoxus S110 RepID=C5CZG8_VARPS Length = 1609 Score = 224 bits (571), Expect = 5e-57, Method: Composition-based stats. Identities = 96/362 (26%), Positives = 138/362 (38%), Gaps = 81/362 (22%) Query: 4 DNRIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAE 63 DN + A Y +D G L E++ + + +D +R+ Sbjct: 1212 DNLLKDYAGTHYTWDERGNLIERSR----------NGEITTFTWDGFNRMRSAET----- 1256 Query: 64 PLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRT--- 120 + + YD LGRR+AKR T +GWDGD L T Sbjct: 1257 FGETTSFSYDALGRRIAKRSSHA---------------TTLFGWDGDTLAFESTQSTEGQ 1301 Query: 121 ---------RIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPP 171 + I++PGSF PL+++ A ++ +GG Sbjct: 1302 QELQAWRGDSVHYIHEPGSFVPLVQIRQAQAVALSQTTD-----VKALIAANGGRYDIEQ 1356 Query: 172 VLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGL 231 + ++L++ P +I Y CDH G Sbjct: 1357 DPLWNGEQLKT------------------------------PQAFAREEIAFYQCDHLGT 1386 Query: 232 PLALVSTEGATEWCAEYDEWGN----LLNEENPHQLQQLIRLPGQQYDEESGLYYNRHRY 287 P L EG W A+Y WG + + IR GQ +D+E+GL+YNRHRY Sbjct: 1387 PQELTDHEGRIAWSAQYKAWGEAKQAISEAGRKAGFRNPIRFQGQYFDDETGLHYNRHRY 1446 Query: 288 YDPLQGRYITQDPIGLKGGWNFYQYPLNPVQYIDSMGLASKYGHLNNGGYGARPNKPPTP 347 YDP GR++++DPIGL GG N QY NP+ +ID +GLA K NN G P Sbjct: 1447 YDPSCGRFVSKDPIGLAGGSNLQQYAPNPLGWIDPLGLAGKGITPNNKGTRTTIEGGNLP 1506 Query: 348 DP 349 P Sbjct: 1507 QP 1508 Score = 95.3 bits (235), Expect = 4e-18, Method: Composition-based stats. Identities = 48/281 (17%), Positives = 72/281 (25%), Gaps = 28/281 (9%) Query: 8 ARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVE 67 Y YD HG L T D + Y YD++HR+ + + Sbjct: 692 TDGTTDDYVYDAHGNLKTHT---------RADGSSVHYAYDARHRITGILDAEGGAWKRD 742 Query: 68 SRYLYDPLGRRV-------AKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRT 120 YD G K + + K + + D D + Sbjct: 743 ----YDASGNLTEEIDPLGHKTEYAYDNAGRPVRITDAKGGIKTLAYTPDGQLASHTDCS 798 Query: 121 RIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRL 180 T + L R+ A G+ + + + Q + + + D Sbjct: 799 GKTTQWAYDGRGRLARITNALGQATRFRYTEAGEAAQSAMPGQANNHPGQLEEIVHPDNT 858 Query: 181 ESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHL--YHCDHRGLPLALVST 238 D A T H YH D G L + Sbjct: 859 SEYFAHDAEGRLLAHTDALGRRTSYGYTRAGLVAQRTDAAGHTLKYHWDLLGRLRELHNE 918 Query: 239 EGATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEESG 279 G+ + YD G LL E + R DE SG Sbjct: 919 NGS-RYDFRYDPVGKLLEETGFDRKGTQYRY-----DEASG 953 Score = 67.5 bits (163), Expect = 9e-10, Method: Composition-based stats. Identities = 34/289 (11%), Positives = 63/289 (21%), Gaps = 64/289 (22%) Query: 13 YLYRYDRHGRLTEKTDLIPE------------GVIRTDDERTHRYHYDSQHRLVHYTRTQ 60 Y YD GR TD +T ++ YD + RL T Sbjct: 760 TEYAYDNAGRPVRITDAKGGIKTLAYTPDGQLASHTDCSGKTTQWAYDGRGRLARITNAL 819 Query: 61 YAEPLVESR---------------------------------YLYDPLGRRVAKRVWRRE 87 + +D GR +A Sbjct: 820 GQATRFRYTEAGEAAQSAMPGQANNHPGQLEEIVHPDNTSEYFAHDAEGRLLAHTDALGR 879 Query: 88 RDLTGWMSLSRKPQVT-------WYGWDGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETA 140 R G+ Q T Y WD ++ + ++ L+ Sbjct: 880 RTSYGYTRAGLVAQRTDAAGHTLKYHWDLLGRLRELHNENGSRYDFRYDPVGKLLEETGF 939 Query: 141 TGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSEESRRWLASC 200 + + + + L + + + L ++ +R + + + R + + Sbjct: 940 DRKGTQYRYDEASGVLAEVIEAGHSTRLAFDPLGRLSERQAGDDAERFAYDRNGRLVEAT 999 Query: 201 GLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWCAEYD 249 H H W YD Sbjct: 1000 NAEARLQWFYDRAGNLVREHQHYLDHGH------------TAVWQHGYD 1036 Score = 63.7 bits (153), Expect = 2e-08, Method: Composition-based stats. Identities = 36/303 (11%), Positives = 67/303 (22%), Gaps = 43/303 (14%) Query: 2 WPDNRIARDAHYL-----YRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHY 56 + + + R +YD G D D +D RL + Sbjct: 593 YSHHLVTRYTDRTGRGMNLQYDGTG-----ADAKAVREWSDDGSFALTLEWDKNIRLTYL 647 Query: 57 TRTQYAEPLVESR---YLY--------------DPLGRRVAKRVWRRERDLTGWMSLSRK 99 T E Y Y D D + + Sbjct: 648 TDAMGGETWYYYDVLGYTYRIIHPDKREEWFLRDDAKNITRHIHTDGTTDDYVYDAHGNL 707 Query: 100 PQVTW-------YGWDGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSL 152 T Y +D T D + L G + + Sbjct: 708 KTHTRADGSSVHYAYDARHRITGILDAEGGAWKRDYDASGNLTEEIDPLGHKTEYAYDNA 767 Query: 153 ADTLQQSGGEDGGSVVFPPVLVQMLDRLE-----SEILADRVSEESRRWLASCGLTVEQM 207 ++ + + G + Q+ + ++ D +R A T + Sbjct: 768 GRPVRITDAKGGIKTLAYTPDGQLASHTDCSGKTTQWAYDGRGRLARITNALGQATRFRY 827 Query: 208 QNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLI 267 + + +H G +V + T +D G LL + + Sbjct: 828 TEAGEAAQSAMPG---QANNHPGQLEEIVHPD-NTSEYFAHDAEGRLLAHTDALGRRTSY 883 Query: 268 RLP 270 Sbjct: 884 GYT 886 Score = 61.7 bits (148), Expect = 6e-08, Method: Composition-based stats. Identities = 37/255 (14%), Positives = 73/255 (28%), Gaps = 33/255 (12%) Query: 12 HYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYL 71 +D GRL+E+ + R+ YD RLV T + ++ Sbjct: 964 STRLAFDPLGRLSERQ----------AGDDAERFAYDRNGRLVEATNAE-----ARLQWF 1008 Query: 72 YDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDG-DRLTTIQNDRTRIQTIYQPGS 130 YD G V + V +G+D ++ + GS Sbjct: 1009 YDRAGNLVREHQH---------YLDHGHTAVWQHGYDELNQRIASIRPDGHVTQWLTYGS 1059 Query: 131 FTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVS 190 + + ++ +R L + + G + ++L++ S+ + Sbjct: 1060 -GHVHGLLVDGQDILGFERDDLHREIGREQGNGLTQKLHYDPAGRLLEQQISQTRPGAIE 1118 Query: 191 EESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDE 250 R + + + + Y D G L S G +D Sbjct: 1119 AVGIRRSYAYDKAGQLVAIGDSRRGNLS-----YRYDPVGRLLEAHSRLGR--ETFAFDP 1171 Query: 251 WGNLLNEENPHQLQQ 265 GN+ + + Q Sbjct: 1172 AGNIGSPSDVGADTQ 1186 Score = 51.7 bits (122), Expect = 5e-05, Method: Composition-based stats. Identities = 36/256 (14%), Positives = 57/256 (22%), Gaps = 48/256 (18%) Query: 6 RIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQ-YAEP 64 R A D + YDR+GRL E T+ YD LV + Sbjct: 978 RQAGDDAERFAYDRNGRLVEATNAEARLQWF----------YDRAGNLVREHQHYLDHGH 1027 Query: 65 LVESRYLYDPLGRRVAKRVWRRERDLT------------------------------GWM 94 ++ YD L +R+A G Sbjct: 1028 TAVWQHGYDELNQRIASIRPDGHVTQWLTYGSGHVHGLLVDGQDILGFERDDLHREIGRE 1087 Query: 95 SLSRKPQVTWYGWDGDRLTTIQNDRT-------RIQTIYQPGSFTPLIRVETATGELAKT 147 + Q Y G L + I+ Y L+ + + Sbjct: 1088 QGNGLTQKLHYDPAGRLLEQQISQTRPGAIEAVGIRRSYAYDKAGQLVAIGDSRRGNLSY 1147 Query: 148 QRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQM 207 + + L+ + F P +R + G Sbjct: 1148 RYDPVGRLLEAHSRLGRETFAFDPAGNIGSPSDVGADTQAAGRMTTRVAVRLGGDGRSMA 1207 Query: 208 QNQMDPVYTPARKIHL 223 MD + H Sbjct: 1208 GRLMDNLLKDYAGTHY 1223 Score = 46.3 bits (108), Expect = 0.002, Method: Composition-based stats. Identities = 49/364 (13%), Positives = 75/364 (20%), Gaps = 71/364 (19%) Query: 103 TWYGWDGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGE 162 + +GD + + Q Y T L + A +++ + Sbjct: 570 YIHDAEGDLVAAQDENGAGWQYSYSHHLVTRYTDRTGRGMNLQYDGTGADAKAVREWSDD 629 Query: 163 DGGSVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPV----YTPA 218 ++ L L D + E+ + G T + Sbjct: 630 GSFALTLEWDKNIRL-----TYLTDAMGGETWYYYDVLGYTYRIIHPDKREEWFLRDDAK 684 Query: 219 RKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRL------PGQ 272 H D G YD GNL G Sbjct: 685 NITRHIHTD--GT----TDD-------YVYDAHGNLKTHTRADGSSVHYAYDARHRITG- 730 Query: 273 QYDEESGLYYNRHRYYDPLQGRYITQDPIGLKGGWNFYQYPLNPVQYIDSMGLASKYGHL 332 D E G R YD N + ID +G ++Y + Sbjct: 731 ILDAEGG---AWKRDYDAS----------------------GNLTEEIDPLGHKTEYAYD 765 Query: 333 NNG-------GYGARPNKPPTPDPSKLPDIAKQLRLPYPIDQASSAPNVFKTFFRALSPY 385 N G G TPD + + + Sbjct: 766 NAGRPVRITDAKGGIKTLAYTPDGQLASHTDCSGKTTQWAYDGRGRLARITNALGQATRF 825 Query: 386 DYT----------LYCRKWVKPNLTCTPQDDSQYPGMDTKTASDYLPQTNWPTTQLPPGY 435 YT L D+ L T+ + GY Sbjct: 826 RYTEAGEAAQSAMPGQANNHPGQLEEIVHPDNTSEYFAHDAEGRLLAHTDALGRRTSYGY 885 Query: 436 TCAE 439 T A Sbjct: 886 TRAG 889 >UniRef50_C4SEH6 Insecticidal toxin complex protein n=5 Tax=Yersinia RepID=C4SEH6_YERMO Length = 939 Score = 224 bits (571), Expect = 5e-57, Method: Composition-based stats. Identities = 72/438 (16%), Positives = 128/438 (29%), Gaps = 60/438 (13%) Query: 6 RIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERT--HRYHYDSQHRLVHYTRTQYAE 63 R Y YD G + + + + Y YD+ ++L+ T + Sbjct: 303 RPTLLQDLRYDYDPVGNILAIHNDAEATRFYRNQKIVPETTYRYDALYQLIEATGRESDS 362 Query: 64 P--------------------LVESRYLYDPLGRRVAKRVWRRERDLTG----------- 92 RY YD G + + + T Sbjct: 363 NSAQSANLPALSLLTDSNQYVNYTRRYTYDRAGNLLKIQHVGASQYSTHITLSDSSNHGI 422 Query: 93 --WMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQPGSFTPLIRV--ETATGELAKTQ 148 L+ + + G++ + +Q T + R +A+ + Sbjct: 423 QQQDGLTAADIRSQFDAAGNQQQLQPGQPLQWDARHQLQQVTTVKRGAENSASDDYESYL 482 Query: 149 RRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQM- 207 S + + + + V + + E + + Q+ Sbjct: 483 YGSDGMRVVKQSIQHTNNTVQTAKVTYLPGLELRTRHQGAELTEDFQVITLGAAGRAQVR 542 Query: 208 ---QNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLL---NEENPH 261 Q P ++ + G L + T G EY +G Sbjct: 543 VLLWQQGKPEGIDNNQLRYSFDNQIGSSLLELDTHGDIISQEEYYPFGGTAVFAARHTLE 602 Query: 262 QLQQLIRLPGQQYDEESGLYYNRHRYYDPLQGRYITQDPIGLKGGWNFYQYP-LNPVQYI 320 + IR G++ D +GLYY RYY P GR+++ DP G G N Y+ NPV + Sbjct: 603 AKYKTIRYSGKERDA-TGLYYYGFRYYMPWLGRWLSADPAGTVDGLNLYRMVRNNPVGLM 661 Query: 321 DSMGLAS-------KYGHLNNGGYGARPNKPPTPDPSKL-------PDIAKQLRLPYPID 366 D GL+ G+ G R N ++ + + + D Sbjct: 662 DEDGLSPGVKYNFISKGYDTLADIGKRQNIKHFTQAKRIVTNSYLDANSIIKSAIEKLND 721 Query: 367 QASSAPNVFKTFFRALSP 384 + V ++FF LSP Sbjct: 722 NSLETTQVLESFFGVLSP 739 Score = 47.9 bits (112), Expect = 9e-04, Method: Composition-based stats. Identities = 28/184 (15%), Positives = 58/184 (31%), Gaps = 13/184 (7%) Query: 27 TDLIPEGVIRTDDERTHRYHYDSQ-HRLVHYTRTQYAEP-----LVESRYLYDPLGRRVA 80 + + + Y Y+++ RL+ T+ A+ L + RY YDP+G +A Sbjct: 263 SAAGQKLREEGGNGVVTEYRYEAETQRLIGIKTTRPAQSERPTLLQDLRYDYDPVGNILA 322 Query: 81 KRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETA 140 + + T + + T Y +D R Q + P + + T Sbjct: 323 ---IHNDAEATRFYRNQKIVPETTYRYDALYQLIEATGRESDSNSAQ-SANLPALSLLTD 378 Query: 141 TGELAKTQRRSLADT---LQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSEESRRWL 197 + + RR D L + L + + ++ ++ Sbjct: 379 SNQYVNYTRRYTYDRAGNLLKIQHVGASQYSTHITLSDSSNHGIQQQDGLTAADIRSQFD 438 Query: 198 ASCG 201 A+ Sbjct: 439 AAGN 442 Score = 45.6 bits (106), Expect = 0.004, Method: Composition-based stats. Identities = 26/212 (12%), Positives = 55/212 (25%), Gaps = 28/212 (13%) Query: 18 DRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVE--SRYLYDPL 75 D G+L +TD T R Y+ +L T E Y Sbjct: 215 DALGQLITQTDAK---------GHTQRMAYNRAGQLFSSWLTLNGGREQEIVRSLTYSAA 265 Query: 76 GRRVAKRVWRRERDLTGWMSLSRK---PQVTWYGWDGDRLTTIQNDRTRIQTIYQPGSFT 132 G+++ + + + +++ + T R + Y Sbjct: 266 GQKLREEGGNGVVTEYRYEAETQRLIGIKTT-------RPAQSERPTLLQDLRYDYDPVG 318 Query: 133 PLIRVETATGELAKT-------QRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEIL 185 ++ + + D L Q G L L Sbjct: 319 NILAIHNDAEATRFYRNQKIVPETTYRYDALYQLIEATGRESDSNSAQSANLPALSLLTD 378 Query: 186 ADRVSEESRRWLASCGLTVEQMQNQMDPVYTP 217 +++ +RR+ + ++Q+ Y+ Sbjct: 379 SNQYVNYTRRYTYDRAGNLLKIQHVGASQYST 410 >UniRef50_Q0JZD5 RHS family protein n=9 Tax=Bacteria RepID=Q0JZD5_RALEH Length = 1585 Score = 224 bits (570), Expect = 7e-57, Method: Composition-based stats. Identities = 93/346 (26%), Positives = 134/346 (38%), Gaps = 60/346 (17%) Query: 4 DNRIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAE 63 DN + + A Y +D G L +R + R+ +D+ +RLV + Sbjct: 1180 DNLLKQYAGTHYEWDERGNL----------SLRVVNGVHERFAWDAFNRLVGW-----HN 1224 Query: 64 PLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQV-----------TWYGWDGDRL 112 P VE RY YD LGRR++K + + R+ + T YGWDGD+L Sbjct: 1225 PKVEVRYRYDALGRRLSKSSSANYFENQNDGEIYRRNERARLNQEYGCAFTLYGWDGDQL 1284 Query: 113 TTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPV 172 R E G G E ++ P Sbjct: 1285 AWES-------------------RQEPEAGVGDHF--------RIIPGAERTTHYLYEPG 1317 Query: 173 LVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLP 232 + L + D + E + + + + Y CDH G P Sbjct: 1318 SLVPLAQAVRREAIDLLPEPAWEGDYDLDDDPLWTREIAPQPFEA---LAWYQCDHLGTP 1374 Query: 233 LALVSTEGATEWCAEYDEWGN----LLNEENPHQLQQLIRLPGQQYDEESGLYYNRHRYY 288 L G W A+Y WG + N +Q +R GQ YD E+GL+YNRHRYY Sbjct: 1375 QELTDEAGELAWSAQYKAWGAAQEAISNAARKAGIQNPLRFQGQYYDHENGLHYNRHRYY 1434 Query: 289 DPLQGRYITQDPIGLKGGWNFYQYPLNPVQYIDSMGLASKYGHLNN 334 DP GR++++DPIGL GG N QY NP+ ++D +GLA + Sbjct: 1435 DPGTGRFVSKDPIGLAGGLNLNQYAPNPISWVDPLGLACSQTRRAS 1480 Score = 64.1 bits (154), Expect = 1e-08, Method: Composition-based stats. Identities = 39/249 (15%), Positives = 76/249 (30%), Gaps = 21/249 (8%) Query: 13 YLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYLY 72 + +D GRLT + + + R T + Y+ RL+ ++ + Sbjct: 926 TDFVFDAMGRLTRRRAGLIDADNRVPHVLTETFAYNGNGRLILAE-----NADSRLQWFH 980 Query: 73 DPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDG-DRLTTIQNDRTRIQTIYQPGSF 131 D G V + V + +D ++ + GS Sbjct: 981 DAAGNVVREHQH-------YRCLKEPLVAVWRHEYDALNQRIATVRPDGHRVGVLTYGS- 1032 Query: 132 TPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSE 191 + V EL + +R +L + ++ G ++L++ S + + Sbjct: 1033 GHVHGVMLDDRELVQFERDNLHRDIARTQGNRLAQSQVYDPAGRLLEQTLSHVEGAHAGQ 1092 Query: 192 ESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEW 251 R Q+ + R Y D G L S G ++D Sbjct: 1093 RMLRREYQYD-----AAGQLSSIRDLRRGTLQYRYDPVGRLLEANSALG--VETFDFDPA 1145 Query: 252 GNLLNEENP 260 GNLL++ + Sbjct: 1146 GNLLHDPDT 1154 Score = 60.2 bits (144), Expect = 2e-07, Method: Composition-based stats. Identities = 38/243 (15%), Positives = 66/243 (27%), Gaps = 36/243 (14%) Query: 18 DRHGRLTEKTDLIPE-GVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYLYDPLG 76 D G T+ + + D+R R+ D++ RL+ +T D L Sbjct: 794 DAAGNATQYHYEAGQLASVTHPDQRVERFERDAEGRLLVHT---------------DALH 838 Query: 77 RRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQPGSFTPLIR 136 RR A WR Q Y WD + T +Q L+R Sbjct: 839 RRTA---WRYNEVGLIAERTDAAGQTLGYRWDRLGRLATLTNENSASTEFQYDPVGRLLR 895 Query: 137 VETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLES---EILADRVSEES 193 G+ + + L + F + L R + + + Sbjct: 896 ESGFDGKTTEYNYDPASGLLDWTVDSGQLMTDFVFDAMGRLTRRRAGLIDADNRVPHVLT 955 Query: 194 RRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGAT------EWCAE 247 + + + +N ++ +H D G + W E Sbjct: 956 ETFAYNGNGRLILAEN-------ADSRLQWFH-DAAGNVVREHQHYRCLKEPLVAVWRHE 1007 Query: 248 YDE 250 YD Sbjct: 1008 YDA 1010 Score = 60.2 bits (144), Expect = 2e-07, Method: Composition-based stats. Identities = 47/328 (14%), Positives = 101/328 (30%), Gaps = 64/328 (19%) Query: 10 DAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQY-------- 61 YR+DR GRL T+ ++ + + YD RL+ + Sbjct: 859 GQTLGYRWDRLGRLATLTN---------ENSASTEFQYDPVGRLLRESGFDGKTTEYNYD 909 Query: 62 ----------AEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGD- 110 + + +++D +GR +R + D L+ + ++G+ Sbjct: 910 PASGLLDWTVDSGQLMTDFVFDAMGRLTRRRAGLIDADNRVPHVLTE-----TFAYNGNG 964 Query: 111 RLTTIQNDRTRIQTIYQPGSFTPLIR-----VETATGELAKTQRRSLADTLQ--QSGGED 163 RL +N +R+Q + ++ + + + +L + + G Sbjct: 965 RLILAENADSRLQWFHDAAGNVVREHQHYRCLKEPLVAVWRHEYDALNQRIATVRPDGHR 1024 Query: 164 GGSVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHL 223 G + + V + + E++ R + G + Q Q + + Sbjct: 1025 VGVLTYGSGHVHGVMLDDRELVQFERDNLHRDIARTQGNRLAQSQVYDPAGRLLEQTLSH 1084 Query: 224 YHCDHRGLPLALV------STEGATEW---------CAEYDEWGNLLNEENPHQLQQ-LI 267 H G ++ G YD G LL + ++ Sbjct: 1085 VEGAHAG--QRMLRREYQYDAAGQLSSIRDLRRGTLQYRYDPVGRLLEANSALGVETFDF 1142 Query: 268 RLPGQ-QYDEESGLYYNRHRYYDPLQGR 294 G +D ++ ++ DP +GR Sbjct: 1143 DPAGNLLHDPDTRVFKA-----DPARGR 1165 Score = 56.0 bits (133), Expect = 3e-06, Method: Composition-based stats. Identities = 46/266 (17%), Positives = 74/266 (27%), Gaps = 38/266 (14%) Query: 14 LYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYLYD 73 Y YD G LT D ++ Y Y QH LV +RY D Sbjct: 546 RYTYDDAGDLTMAQD---------ENAAHWEYTY--QHHLV-------------TRYT-D 580 Query: 74 PLGR-RVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGD-RLTTIQNDRTRIQTIYQPGSF 131 GR + T WD + RLT + + Y Sbjct: 581 RTGRGMNLQWQGDGPDARAVREWADDGSFDTRLEWDENIRLTYVTDAHGNETWHY-YDIL 639 Query: 132 TPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQML------DRLESEIL 185 R++ G L++ R A + + DG + L D Sbjct: 640 GYTYRIQHPDG-LSEWFFRDHAKNVVKHVHTDGAVDRYAYDERGNLVEHIRPDDSVVHYA 698 Query: 186 ADRVSEESRRWLASCGLTVEQMQNQMDPVYT--PARKIHLYHCDHRGLPLALVSTEGATE 243 D + + A GL + + + P Y + GLP+ + +G + Sbjct: 699 WDDKDQLIKIRDAEGGLWLRDYDIKGNLTEEIDPLGHKTAYAYNKSGLPVEITDAKGGKK 758 Query: 244 WCAEYDEWGNLLNEENPHQLQQLIRL 269 + G L + + + Sbjct: 759 -QLAFTATGQLASYTDCSGKTSAWKY 783 Score = 52.1 bits (123), Expect = 4e-05, Method: Composition-based stats. Identities = 65/457 (14%), Positives = 108/457 (23%), Gaps = 56/457 (12%) Query: 15 YRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQH-RLVHYTRTQYAEPLVESRYLYD 73 + +D +T + E Y Q RL T A + YD Sbjct: 440 FHHDPIDNVTLVRVSENGLTLARGFESQETYRRHGQRFRLTGITLRSGAGVAL----HYD 495 Query: 74 PLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQ---------- 123 R T + T + G R Q Sbjct: 496 -----------HRIDGDTVLSDVIAYQGETVFAHVGVRPDAKGRIAELWQIADSKLVRQL 544 Query: 124 TIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQ----MLDR 179 + Y L + + + T G ++ + Sbjct: 545 SRYTYDDAGDLTMAQDENAAHWEYTYQHHLVTRYTDRTGRGMNLQWQGDGPDARAVREWA 604 Query: 180 LESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIH------LYHCDHRGLPL 233 + +E+ R + + D + R H + DH + Sbjct: 605 DDGSFDTRLEWDENIRLTYVTDAHGNETWHYYDILGYTYRIQHPDGLSEWFFRDHAKNVV 664 Query: 234 ALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRLPG-----QQYDEESGLYYNRHRYY 288 V T+GA YDE GNL+ P + D E GL+ R Y Sbjct: 665 KHVHTDGA-VDRYAYDERGNLVEHIRPDDSVVHYAWDDKDQLIKIRDAEGGLWL---RDY 720 Query: 289 DPLQGRYITQ-DPIGLKGGWNFYQYPLN----PVQYIDSMGLASKYGHLNNGGYGARPNK 343 D G + DP+G K Y N PV+ D+ G + G + + Sbjct: 721 DIK-GNLTEEIDPLGHKT-----AYAYNKSGLPVEITDAKGGKKQLAFTATGQLASYTDC 774 Query: 344 PPTPDPSKLPDIAKQLRLPYPIDQASSAPNVFKTFFRALSPYDYTLYCRKWVKPNLTCTP 403 K + + +R A+ P + + L Sbjct: 775 SGKTSAWKYGERGELVRFTDAAGNATQYHYEAGQLASVTHPDQRVERFERDAEGRLLVHT 834 Query: 404 QDDSQYPGMDTKTASDYLPQTNWPTTQLPPGYTCAEP 440 + +T+ L + Sbjct: 835 DALHRRTAWRYNEVGLIAERTDAAGQTLGYRWDRLGR 871 Score = 51.3 bits (121), Expect = 9e-05, Method: Composition-based stats. Identities = 46/294 (15%), Positives = 77/294 (26%), Gaps = 47/294 (15%) Query: 6 RIARDAHYLYRY---------DRHG---RLTEKTDLIPEGVIR---TDDERTHRYHYDSQ 50 + AH+ Y Y DR G L + D +R D R +D Sbjct: 559 QDENAAHWEYTYQHHLVTRYTDRTGRGMNLQWQGDGPDARAVREWADDGSFDTRLEWDEN 618 Query: 51 HRLVHYTRTQYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMS-------LSRKPQVT 103 RL + T A Y YD LG + + + V Sbjct: 619 IRLTYVT---DAHGNETWHY-YDILGYTYRIQHPDGLSEWFFRDHAKNVVKHVHTDGAVD 674 Query: 104 WYGWDGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGED 163 Y +D Y LI++ A G L ++ + E+ Sbjct: 675 RYAYDERGNLVEHIRPDDSVVHYAWDDKDQLIKIRDAEGGLWLRDYD-----IKGNLTEE 729 Query: 164 GGSVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHL 223 + L EI + ++ + A+ L + + + Sbjct: 730 IDPLGHKTAYAYNKSGLPVEITDAKGGKKQLAFTATGQLASYTDCSGKTSAWKYGER--- 786 Query: 224 YHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEE 277 G + G Y+ G L + +P Q + + D E Sbjct: 787 ------GELVRFTDAAGNAT-QYHYEA-GQLASVTHPDQRVERF-----ERDAE 827 Score = 49.8 bits (117), Expect = 2e-04, Method: Composition-based stats. Identities = 41/318 (12%), Positives = 77/318 (24%), Gaps = 72/318 (22%) Query: 3 PDNRIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDER------------------THR 44 DNR+ + Y+ +GRL + D R Sbjct: 946 ADNRVPHVLTETFAYNGNGRLILAENADSRLQWFHDAAGNVVREHQHYRCLKEPLVAVWR 1005 Query: 45 YHYDSQHRLVHYTRTQYAEPLVESRYL--------------------------------- 71 + YD+ ++ + R + Y Sbjct: 1006 HEYDALNQRIATVRPD-GHRVGVLTYGSGHVHGVMLDDRELVQFERDNLHRDIARTQGNR 1064 Query: 72 ------YDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTI 125 YDP GR + + + E G L R Y +D + D R Sbjct: 1065 LAQSQVYDPAGRLLEQTLSHVEGAHAGQRMLRR-----EYQYDAAGQLSSIRDLRRGTLQ 1119 Query: 126 YQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEIL 185 Y+ L+ +A G + + L D P + + Sbjct: 1120 YRYDPVGRLLEANSALG-VETFDFDPAGNLL---HDPDTRVFKADPARGRPEFHSRLQGR 1175 Query: 186 ADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWC 245 V +++ + E+ + V + D + + + Sbjct: 1176 PKLVDNLLKQYAGTHYEWDERGNLSLRVVNGVHERFAW---DAFNRLVGWHNPKVEV--R 1230 Query: 246 AEYDEWGNLLNEENPHQL 263 YD G L++ + Sbjct: 1231 YRYDALGRRLSKSSSANY 1248 >UniRef50_D0KEV6 RHS protein n=2 Tax=Enterobacteriaceae RepID=D0KEV6_PECWW Length = 1348 Score = 223 bits (567), Expect = 2e-56, Method: Composition-based stats. Identities = 90/421 (21%), Positives = 138/421 (32%), Gaps = 55/421 (13%) Query: 6 RIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDD----------------ERTHRYHYDS 49 R Y +D GRL + D HRY YD+ Sbjct: 887 RTQGAITSDYVHDEMGRLVSQRAGGEGKTTVARDYVWRRDGQLMQMVDKYTGDHRYEYDA 946 Query: 50 QHRLVHYTRTQYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDG 109 RL + R+ +DP ++ + L + + Y G Sbjct: 947 LGRLTRS---------GDERFAFDPAHNLLSSAQAQ---PLPDNRLQVFEDKRWKYDNFG 994 Query: 110 DRLTTIQNDRTRIQTIYQPGSFTPLIRV---ETATGELAKTQRRSLADTLQQSGGEDGGS 166 + ++ + + L T + + + Sbjct: 995 N--VAEKHIGRHTVQQFSWNAEHQLAEAISTRNGTAQRTTYGYDAFGRRSWKRDTFGITH 1052 Query: 167 VVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQ-MDPVYTPARKIHLYH 225 + +RL SEI W+ Q +++ YH Sbjct: 1053 ------FIWDGNRLLSEIC----GSRHHLWIYGDEGFAPLAQVSLQQGETEHEAQVYWYH 1102 Query: 226 CDHRGLPLALVSTEGATEWCAEYDEWGNLLNEE-----NPHQLQQLIRLPGQQYDEESGL 280 D GLP + +G W AEY WGN + E + + Q +R GQ +D E+GL Sbjct: 1103 NDVSGLPREMTGQDGGLVWRAEYRVWGNTVRVEQVEVPHSEPIHQPLRYQGQYFDAETGL 1162 Query: 281 YYNRHRYYDPLQGRYITQDPIGLKGGWNFYQYPLNPVQYIDSMGLASKYGHLNNGGYGAR 340 +YNR RYYDP GR+++QDPIGL GG N YQY NP+ +ID +GL G ++ G Sbjct: 1163 HYNRFRYYDPDAGRFVSQDPIGLAGGINLYQYAPNPITWIDPLGLTPCMGLPSSRKAGGT 1222 Query: 341 PNKPPTPDPSKLPDIAKQLRLPYPIDQASSAPNV-FKTFFRALSPYDYTLYCRKWVKPNL 399 K + + + +V + A +P L NL Sbjct: 1223 GGKY-----DPMKGQGLYVLAENGKIKYVGRGDVHSRLNIHANTPGKSHLEQFIISDNNL 1277 Query: 400 T 400 T Sbjct: 1278 T 1278 Score = 66.8 bits (161), Expect = 2e-09, Method: Composition-based stats. Identities = 40/274 (14%), Positives = 64/274 (23%), Gaps = 41/274 (14%) Query: 8 ARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVE 67 AR Y YD GRL + +D +L RT E Sbjct: 783 ARWQRTRYGYDALGRLIA----------GVNHGGRVELEWDDAGQLT-AERTLTRGVSHE 831 Query: 68 SRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQ 127 Y YD LG R+ + + QV G R+ + T + Sbjct: 832 LSYQYDELGNCTHTRLPDGHELKHFYYGSGHRLQVNL----GSRVISESERDTLHR---- 883 Query: 128 PGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILAD 187 V G + L G V D +++ Sbjct: 884 --------EVRRTQGAITSDYVHDEMGRLVSQRAGGEGKTTVARDYVWRRDGQLMQMVDK 935 Query: 188 RVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLA--LVSTEGATEW- 244 + + A ++ D + + A L Sbjct: 936 YTGDHRYEYDALG-----RLTRSGDERFAFDPA-----HNLLSSAQAQPLPDNRLQVFED 985 Query: 245 -CAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEE 277 +YD +GN+ + Q + E Sbjct: 986 KRWKYDNFGNVAEKHIGRHTVQQFSWNAEHQLAE 1019 Score = 66.0 bits (159), Expect = 3e-09, Method: Composition-based stats. Identities = 38/273 (13%), Positives = 66/273 (24%), Gaps = 48/273 (17%) Query: 10 DAHYLYRYDRHGRLTEKTDLIPEGVIRTDDER------------THRYHYDSQHRLVHYT 57 Y YD G L D I D+R + ++S LV +T Sbjct: 544 GGTREYHYDIAGNLIRMMDEIGRITEYNHDDRGNLVRIRDAAAGVQQLCWNSADFLVSHT 603 Query: 58 RTQYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSR------------------- 98 + + YD G + + Sbjct: 604 D----CSGRITTFEYDKYGWLKQQTDAAGHHTTLYHGRDGQPQRVVHADGSTERAEFDRW 659 Query: 99 ---------KPQVTWYGWDGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQR 149 + Q+T + D L + D Q Y+ L + G Sbjct: 660 RRLTAWHDAQGQITRWTLAADGLPLTRTDALGHQVGYEYDHARRLTALINENGARHTFSY 719 Query: 150 RSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQN 209 + + + + G + + + R E + A+ L + Sbjct: 720 DARDNLVCERGFDGNTTRYEFDDGGYLQARTEDGDGRGPGIRTRYQRDAAGRLLEKLTAR 779 Query: 210 QMDPVYTPARKIHLYHCDHRGLPLALVSTEGAT 242 D + R Y D G +A V+ G Sbjct: 780 SGDARWQRTR----YGYDALGRLIAGVNHGGRV 808 Score = 64.4 bits (155), Expect = 9e-09, Method: Composition-based stats. Identities = 45/275 (16%), Positives = 73/275 (26%), Gaps = 37/275 (13%) Query: 13 YLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRL-VHYTRTQYAEPLVESRYL 71 YRYD G T ++ D +T R+ Y + L V T Y Sbjct: 504 TRYRYDERGNCTAVSE---------PDGQTTRFDYHERWNLPVRVTDMLGG----TREYH 550 Query: 72 YDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQPGSF 131 YD G + + ++T Y D D S Sbjct: 551 YDIAGNLIRM--------------MDEIGRITEYNHDDRGNLVRIRDAAAGVQQLCWNSA 596 Query: 132 TPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSE 191 L+ +G + + QQ+ + ++ Q + ++ +R Sbjct: 597 DFLVSHTDCSGRITTFEYDKYGWLKQQTDAAGHHTTLYHGRDGQPQRVVHADGSTERAEF 656 Query: 192 ESRR----WLASCGLTVEQMQNQMDPVYTPARKIHL---YHCDHRGLPLALVSTEGATEW 244 + R W + G T + Y DH AL++ GA Sbjct: 657 DRWRRLTAWHDAQGQITRWTLAADGLPLTRTDALGHQVGYEYDHARRLTALINENGA-RH 715 Query: 245 CAEYDEWGNLLNEENPHQLQQLIRL-PGQQYDEES 278 YD NL+ E G + Sbjct: 716 TFSYDARDNLVCERGFDGNTTRYEFDDGGYLQART 750 Score = 47.1 bits (110), Expect = 0.001, Method: Composition-based stats. Identities = 38/270 (14%), Positives = 64/270 (23%), Gaps = 55/270 (20%) Query: 13 YLYRYDRHGRLTEKTDLIP------------EGVIRTDDERTHRYHYDSQHRLVHYTRTQ 60 + YD++G L ++TD + D T R +D RL + Q Sbjct: 610 TTFEYDKYGWLKQQTDAAGHHTTLYHGRDGQPQRVVHADGSTERAEFDRWRRLTAWHDAQ 669 Query: 61 YAEP-----------------LVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVT 103 + Y YD R A ++ Sbjct: 670 GQITRWTLAADGLPLTRTDALGHQVGYEYDHARRLTA--------------LINENGARH 715 Query: 104 WYGWDGDRLTTIQNDRTRIQTIYQPGSFTPL-IRVETATGE----LAKTQRRSLADTLQQ 158 + +D + T Y+ L R E G + QR + L++ Sbjct: 716 TFSYDARDNLVCERGFDGNTTRYEFDDGGYLQARTEDGDGRGPGIRTRYQRDAAGRLLEK 775 Query: 159 SGGEDGGSVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPA 218 G + + + W + LT E+ + Sbjct: 776 LTARSGDARWQRTRYGYDALGRLIAGV-NHGGRVELEWDDAGQLTAERTLTRGVSHELS- 833 Query: 219 RKIHLYHCDHRGLPLALVSTEGATEWCAEY 248 Y D G +G Y Sbjct: 834 -----YQYDELGNCTHTRLPDGHELKHFYY 858 Score = 44.4 bits (103), Expect = 0.008, Method: Composition-based stats. Identities = 39/276 (14%), Positives = 75/276 (27%), Gaps = 42/276 (15%) Query: 14 LYRYDRHGRLTEKTDLIPEG------------VIRTDDERTHRYHYDS--------QHR- 52 Y Y G L + + R E YHYD HR Sbjct: 378 SYDYSPQGDLIAVRNEQGDVLREFRYRNHMMVAHRRAGEMACFYHYDKHTPDGKVLAHRD 437 Query: 53 -LVHYTRTQYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDR 111 L R +Y D LGR V + + ++ ++ + Sbjct: 438 SLGGEWRFEYGRNSTTVT---DVLGRVTHYDVDDHQELIGYRDAMGGYIRIRR---NMRG 491 Query: 112 LTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPP 171 D+ T Y+ V G+ + + + GG+ + Sbjct: 492 QMIQLTDQAERITRYRYDERGNCTAVSEPDGQTTRFDYHERWNLPVRVTDMLGGTREYHY 551 Query: 172 VLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGL 231 + L R+ EI + + ++++ V +++ D Sbjct: 552 DIAGNLIRMMDEI------GRITEYNHDDRGNLVRIRDAAAGV----QQLCWNSADFL-- 599 Query: 232 PLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLI 267 ++ G EYD++G L + + + Sbjct: 600 -VSHTDCSGRIT-TFEYDKYGWLKQQTDAAGHHTTL 633 >UniRef50_Q7MDR0 Rhs family protein n=3 Tax=Vibrio vulnificus RepID=Q7MDR0_VIBVY Length = 1498 Score = 222 bits (566), Expect = 2e-56, Method: Composition-based stats. Identities = 86/363 (23%), Positives = 136/363 (37%), Gaps = 54/363 (14%) Query: 13 YLYRYDRHGRLTE----------KTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYA 62 + YD GR+ + D I + + R+ +YHYD+ H+L + Sbjct: 819 VHFDYDSMGRICSVYYGQDQEQKRFDGIGRLSQQQWNNRSRKYHYDTAHQLAIIIDS--- 875 Query: 63 EPLVESRYLYDPLGRRVAKRVWRRERDLT---------------GWMSLSRKPQVTWYGW 107 S Y YD LG+ + +E G + Y Sbjct: 876 -VQGASHYQYDSLGQLTRAKTAHQEETYRFDSFGNPSEADCLLMGDRLVEHNGWRFQYDA 934 Query: 108 DGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSV 167 G+++ + + + L++V++ G L+ + +L ++ Sbjct: 935 HGNQICAEGEGSAQYRCF---NALNQLVQVDS-DGVLSHFEYDALGRRSRKVTESGTTEF 990 Query: 168 VFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCD 227 ++ L RW + + + + Y CD Sbjct: 991 IWQGSQ-----------LIGEYHNGKYRWYFYLPN------SHTPIMLVEDEQCYFYQCD 1033 Query: 228 HRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEESGLYYNRHRY 287 G PLALV +G+ W A YD +G E + +R GQ +D E+GL+YN RY Sbjct: 1034 QIGTPLALVDEQGSVVWQARYDTYGRAHIE--VESVGNPLRFQGQYHDVETGLHYNLARY 1091 Query: 288 YDPLQGRYITQDPIGLKGGWNFYQYPLNPVQYIDSMGLASKYG--HLNNGGYGARPNKPP 345 YDP GR+I DPIGL GG N YQY NPV ++D GL +K G + G +P +P Sbjct: 1092 YDPRTGRFIQPDPIGLLGGINHYQYAPNPVMWVDPHGLCAKEGSPAIKAGVNDTQPQQPM 1151 Query: 346 TPD 348 Sbjct: 1152 FYA 1154 Score = 64.4 bits (155), Expect = 8e-09, Method: Composition-based stats. Identities = 37/277 (13%), Positives = 63/277 (22%), Gaps = 35/277 (12%) Query: 9 RDAHYLYRYDRHGRLTEKTDLIP------------EGVIRTDDERTHRYHYDSQHRLVHY 56 +RYD L + + D T +Y+YD RL Sbjct: 646 DGGELAFRYDGERNLVGISRSDACDFLFTLSPDDYVTETQNFDGVTTQYYYDLAGRLSRL 705 Query: 57 TRTQYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQ---------VTWYGW 107 + + YD G + S Q Y + Sbjct: 706 E-----SCESQVVFSYDAEGNLCLVKAGATHGVSENRYQFSHGSQLRLATNQACTIQYQY 760 Query: 108 DGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSV 167 + Q + Y + L ++ A G + S GE V Sbjct: 761 SSGGQLSQQIQGQH-RIGYYHNASGQLSQLCLADGSQVNYAYTAYGQLAAISMGEKPPCV 819 Query: 168 VFPPV------LVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKI 221 F V E + ++W +Q+ + + Sbjct: 820 HFDYDSMGRICSVYYGQDQEQKRFDGIGRLSQQQWNNRSRKYHYDTAHQLAIIIDSVQGA 879 Query: 222 HLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEE 258 Y D G + +D +GN + Sbjct: 880 SHYQYDSLGQLTRAKTAHQE--ETYRFDSFGNPSEAD 914 Score = 62.5 bits (150), Expect = 3e-08, Method: Composition-based stats. Identities = 41/293 (13%), Positives = 72/293 (24%), Gaps = 49/293 (16%) Query: 16 RYDRHGRLTEKTDLIPEGVIRTDDERTH-----------RYHYDSQHRLVHY-------- 56 RYD+ GRL E+ E ++ RY Y+ +HRL Sbjct: 524 RYDKFGRLIERKASDGESHQWWWNDAHQMIAHQANQTLLRYSYNQEHRLDGIAFPNGMVT 583 Query: 57 --------------TRTQYAEPLVESRYLYDPLGRRVAKRVWRRERD------LTGWMSL 96 T ++ + E RY YD GR + Sbjct: 584 AFEHDTNGHLTKTFTYSEEDDLQHEVRYRYDECGRVTHLITPAGTSTIEWGLLAQPNAII 643 Query: 97 SRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTL 156 + +DG+R + ++ + + G + Sbjct: 644 RPDGGELAFRYDGERNLVGISRSDACDFLFTLSPDDYVTETQNFDGVTTQYYYDLAGRLS 703 Query: 157 QQSGGEDGGSVVFPPVLVQML-----DRLESEILADRVSEESRRWLASCGLTVEQMQNQM 211 + E + L SE R + T++ + Sbjct: 704 RLESCESQVVFSYDAEGNLCLVKAGATHGVSENRYQFSHGSQLRLATNQACTIQYQYSSG 763 Query: 212 DPVYTPARKIH---LYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPH 261 + + H YH + G L +G+ Y +G L Sbjct: 764 GQLSQQIQGQHRIGYYH-NASGQLSQLCLADGSQVN-YAYTAYGQLAAISMGE 814 Score = 62.5 bits (150), Expect = 3e-08, Method: Composition-based stats. Identities = 60/427 (14%), Positives = 113/427 (26%), Gaps = 68/427 (15%) Query: 6 RIARDA--HYLYRYDRHGRLTEKTDLIPEGVIRTD-----------DERTHRYHYDSQHR 52 R+A + Y+Y G+L+++ + D Y Y + + Sbjct: 747 RLATNQACTIQYQYSSGGQLSQQIQGQHRIGYYHNASGQLSQLCLADGSQVNYAYTAYGQ 806 Query: 53 LVHYTRTQYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRL 112 L + + + YD +GR + + + + + DG Sbjct: 807 LAAISMGEKPPC---VHFDYDSMGRICS-------------VYYGQDQEQKRF--DGIGR 848 Query: 113 TTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPV 172 + Q R + Y + L + + + Q SL + + F Sbjct: 849 LSQQQWNNRSR-KYHYDTAHQLAIIIDSVQGASHYQYDSLGQLTRAKTAHQEETYRFDSF 907 Query: 173 LVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLP 232 R + G + + + Sbjct: 908 ---------GNPSEADCLLMGDRLVEHNGWRFQYDAHGNQICAEGEGSAQYRCFNALNQL 958 Query: 233 LALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEESGLYYNR-HRYYDPL 291 + + ++G EYD G + + G Q G Y+N +R+Y Sbjct: 959 VQV-DSDG-VLSHFEYDALGR-RSRKVTESGTTEFIWQGSQL---IGEYHNGKYRWY--- 1009 Query: 292 QGRYI--TQDPIGLKGGWNFYQY----PLNPVQYIDSMG---LASKYGHLNNGGYGARPN 342 Y+ + PI L Y Y P+ +D G ++Y Sbjct: 1010 --FYLPNSHTPIMLVEDEQCYFYQCDQIGTPLALVDEQGSVVWQARYDTYGRAHIEVESV 1067 Query: 343 KPPTPDPSKLPDIAKQL-----RLPYPIDQASSAPNVFKTFFRALSPYDYTLYCRKWVKP 397 P + D+ L R P P+ ++ Y Y WV P Sbjct: 1068 GNPLRFQGQYHDVETGLHYNLARYYDPRTGRFIQPDPIGL-LGGINHYQYAPNPVMWVDP 1126 Query: 398 NLTCTPQ 404 + C + Sbjct: 1127 HGLCAKE 1133 Score = 61.4 bits (147), Expect = 8e-08, Method: Composition-based stats. Identities = 37/227 (16%), Positives = 64/227 (28%), Gaps = 39/227 (17%) Query: 4 DNRIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAE 63 +R+ + ++YD HG + + ++ ++LV Sbjct: 919 GDRLVEHNGWRFQYDAHGN--------QICAEGEGSAQYRCF--NALNQLVQVD-----S 963 Query: 64 PLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQ 123 V S + YD LGRR K T + W G +L ++ Sbjct: 964 DGVLSHFEYDALGRRSRKVTE---------------SGTTEFIWQGSQLIGEYHNGKYRW 1008 Query: 124 TIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESE 183 Y P S TP++ VE + Q + L + ++ GSVV+ Sbjct: 1009 YFYLPNSHTPIMLVE--DEQCYFYQCDQIGTPL--ALVDEQGSVVWQARYDTYGRAHIEV 1064 Query: 184 ILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRG 230 ++ + DP D G Sbjct: 1065 ESVGNPLRFQGQYHDVETGLHYNLARYYDPRTG-----RFIQPDPIG 1106 Score = 59.1 bits (141), Expect = 3e-07, Method: Composition-based stats. Identities = 48/302 (15%), Positives = 77/302 (25%), Gaps = 49/302 (16%) Query: 12 HYLYRYDRHGRLTEKTDLIPEGVIR-----------TDDERTHRYHYDSQHRLVHYTRTQ 60 YRYD GR+T I D + YD + LV +R+ Sbjct: 608 EVRYRYDECGRVTHLITPAGTSTIEWGLLAQPNAIIRPDGGELAFRYDGERNLVGISRSD 667 Query: 61 YAE-----------------PLVESRYLYDPLGR--RVAKRVWRRERDLTGWMSLSRKPQ 101 + V ++Y YD GR R+ + +L Sbjct: 668 ACDFLFTLSPDDYVTETQNFDGVTTQYYYDLAGRLSRLESCESQVVFSYDAEGNLCLVKA 727 Query: 102 VTWYGWDGDRLTTIQN------DRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADT 155 +G +R YQ S L + G+ + + Sbjct: 728 GATHGVSENRYQFSHGSQLRLATNQACTIQYQYSSGGQLSQ--QIQGQHRIGYYHNASGQ 785 Query: 156 LQQSGGEDGGSVVFPPVLVQMLDRLE-------SEILADRVSEESRRWLASCGLTVEQMQ 208 L Q DG V + L + D + + Sbjct: 786 LSQLCLADGSQVNYAYTAYGQLAAISMGEKPPCVHFDYDSMGRICSVYYGQDQEQKRFDG 845 Query: 209 NQMDPVYTPARKIHLYHCDHRGLPLALVST-EGATEWCAEYDEWGNLLNEENPHQLQQLI 267 + YH D ++ + +GA +YD G L + HQ + Sbjct: 846 IGRLSQQQWNNRSRKYHYDTAHQLAIIIDSVQGA--SHYQYDSLGQLTRAKTAHQEET-Y 902 Query: 268 RL 269 R Sbjct: 903 RF 904 Score = 57.5 bits (137), Expect = 1e-06, Method: Composition-based stats. Identities = 31/247 (12%), Positives = 59/247 (23%), Gaps = 23/247 (9%) Query: 34 VIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGW 93 IR + + YD + LV + L Y YD A + + + Sbjct: 298 GIRYNKQHCAELQYDRRGHLVEVRLPDSGKVLA--SYQYDAQDNLTAATNQHGQTESYFY 355 Query: 94 MSLSRKPQVTW-------YGWDGDRL----TTIQNDRTRIQTIYQPGSFTPLIRVETATG 142 + + W + D + T R G Sbjct: 356 SESHLLKRRQRQSGFSHYFEWSAEGPEAKCLRNYGDDGTYDYQFYYQDETSSYR--DTLG 413 Query: 143 ELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQM-------LDRLESEILADRVSEESRR 195 + + + E ++ + + + A + R Sbjct: 414 HQWSFEHNAHGKLSSKRSPEGREWRWEYDDNGRLVRAIQPSGETVCYQYNAYGQKTKERH 473 Query: 196 WLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLL 255 + Q + P + + GL AL G C YD++G L+ Sbjct: 474 SSGATTGYQYNALGQQTAIRYPNGSLEQRQYNILGLLTALSDANGKRTDC-RYDKFGRLI 532 Query: 256 NEENPHQ 262 + Sbjct: 533 ERKASDG 539 >UniRef50_Q39K64 Rhs family protein n=22 Tax=Burkholderia RepID=Q39K64_BURS3 Length = 1560 Score = 222 bits (566), Expect = 2e-56, Method: Composition-based stats. Identities = 90/397 (22%), Positives = 134/397 (33%), Gaps = 83/397 (20%) Query: 5 NRIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEP 64 N A A YRYD G+L + D + Y YD RL+ P Sbjct: 1080 NAPAPLAERRYRYDAAGQLVQIED---------NRRGLTDYRYDPVGRLLESI-----GP 1125 Query: 65 LVESRYLYDPLGRR--------------------VAKRVWRRERDLTGWMSLSRKPQVTW 104 + R+ +DP + + G + + Sbjct: 1126 AGKERFAFDPASNIIDPVRVEAPRTESRPSPVRATESTLPAEVPKVLGNLLKQYAGEHFA 1185 Query: 105 YGWDGDRLTTIQNDRTRIQTIYQPGSFTPLIRV---ETATGELAKTQRRSLADTLQQSGG 161 Y G+ + + Y+ +F + E A ++ +L + + Sbjct: 1186 YDARGN---LVHRRSPAGEQRYEWNAFNRMTAATVDEVARRSESRYYYDALGRRIAKEV- 1241 Query: 162 EDGGSVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMD--------- 212 +G VF + + + S +L G V +Q Sbjct: 1242 -NGERTVFGWDGD--------TLAYESGEQGSTHYLYEAGSFVPMVQYASASVDGFETPS 1292 Query: 213 -----------------PVYTPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLL 255 P YHCD G P L EG W A Y WG Sbjct: 1293 RRETDRYVPEDDPLQRLPERVGDAHAFYYHCDQIGTPQLLTDDEGDVVWEASYKAWGEAR 1352 Query: 256 NEENPHQ------LQQLIRLPGQQYDEESGLYYNRHRYYDPLQGRYITQDPIGLKGGWNF 309 + +R GQQ D+E+GL+YNRHRYYDP GR++++DPIGL GG N Sbjct: 1353 EVIARASKVAGIVPRSSLRFQGQQVDDETGLHYNRHRYYDPRSGRFVSKDPIGLAGGINV 1412 Query: 310 YQYPLNPVQYIDSMGLASKYGHLN-NGGYGARPNKPP 345 YQY NPV+++D +GL+ G + + G KP Sbjct: 1413 YQYAPNPVKWVDPLGLSKSEGGCSCSCGINPVTGKPR 1449 Score = 84.1 bits (206), Expect = 1e-14, Method: Composition-based stats. Identities = 35/273 (12%), Positives = 66/273 (24%), Gaps = 48/273 (17%) Query: 13 YLYRYDRHGRLTEKTDLIPE------------GVIRTDDERTHRYHYDSQHRLVHYTRTQ 60 Y YD G LT D +T ++ YD+Q RL Sbjct: 742 TEYAYDGRGLLTRIKDAKGGVKALKYDDVGQLTGYTDCSGKTSQWAYDAQGRLSEAKDAA 801 Query: 61 YAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMS------LSRKPQVTWYGWDGDRLTT 114 + Y Y G+ + L+ + + T YG+D Sbjct: 802 GG----VTAYRYGANGQLIEVVSPAGREQLSYDAEGRLLTHIDPLNRNTRYGYDASGRIN 857 Query: 115 IQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLV 174 I+ D Y+ ++ + + +++ + + Sbjct: 858 IRTDALGQSLSYRYDRLGRIVGLTNQNHANYSFRYDVAGRMIEEIDFDGKAT-------R 910 Query: 175 QMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRG---- 230 D S + + + + G + V A + D G Sbjct: 911 YSYDEASSRLESVDEAGQVMTMSHDRGGRL-----NGRSVGEEAERFSY---DPLGRLIE 962 Query: 231 ------LPLALVSTEGATE-WCAEYDEWGNLLN 256 G YD +G+ + Sbjct: 963 ASNRYSRVQRFFDPAGNLVREHHAYDLFGSSRS 995 Score = 74.8 bits (182), Expect = 7e-12, Method: Composition-based stats. Identities = 55/379 (14%), Positives = 95/379 (25%), Gaps = 62/379 (16%) Query: 16 RYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYLYDPL 75 YD G + D YD + +LV T P + YD Sbjct: 682 EYDVRGNFVR---------HQRTDGSVVEMAYDQKDQLVRVTDP-LGHPWLRE---YDDA 728 Query: 76 GRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQPGSFTPLI 135 G VA + T Y +DG L T D + L Sbjct: 729 GNMVA--------------EVDPLGHKTEYAYDGRGLLTRIKDAKGGVKALKYDDVGQLT 774 Query: 136 RVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSEESRR 195 +G+ ++ + + G + Q+++ + + R Sbjct: 775 GYTDCSGKTSQWAYDAQGRLSEAKDAAGGVTAYRYGANGQLIEVVSPAGREQLSYDAEGR 834 Query: 196 WLASCGLTVEQMQNQMDPVYTPA------RKIHLYHCDHRGLPLALVSTEGATEWCAEYD 249 L + D + Y D G + L + + YD Sbjct: 835 LLTHIDPLNRNTRYGYDASGRINIRTDALGQSLSYRYDRLGRIVGLTNQN-HANYSFRYD 893 Query: 250 EWGNLLNEENPHQLQQLIRL------------PGQQYDEESGLYYNRHRYYDPLQG---- 293 G ++ E + GQ + + R G Sbjct: 894 VAGRMIEEIDFDGKATRYSYDEASSRLESVDEAGQVM---TMSHDRGGRLNGRSVGEEAE 950 Query: 294 RYITQDPIG-LKGGWNFYQYPLNPVQYIDSMGLASKYGHLNNGGYGARPNKPPTPDPSKL 352 R+ + DP+G L N Y ++ D G + H Y + + Sbjct: 951 RF-SYDPLGRLIEASNRYSRV---QRFFDPAGNLVREHH----AYDLFGSSRSFVWHHRY 1002 Query: 353 PDIAKQLRLPYPIDQASSA 371 +I ++ P A Sbjct: 1003 DEIGNRIGTVRPDGHAVDW 1021 Score = 69.5 bits (168), Expect = 3e-10, Method: Composition-based stats. Identities = 41/290 (14%), Positives = 74/290 (25%), Gaps = 51/290 (17%) Query: 11 AHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRY 70 + Y YD GR+ +TD + ++ Y YD R+V T +A + Sbjct: 844 RNTRYGYDASGRINIRTDAL---------GQSLSYRYDRLGRIVGLTNQNHAN----YSF 890 Query: 71 LYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQ------- 123 YD GR + + + + + S + + G +T + R+ Sbjct: 891 RYDVAGRMIEEIDFDGKATRYSYDEASSRLE--SVDEAGQVMTMSHDRGGRLNGRSVGEE 948 Query: 124 -TIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLES 182 + LI + + +++ D V D + + Sbjct: 949 AERFSYDPLGRLIEASNRY-SRVQRFFDPAGNLVREHHAYDLFGSSRSFVWHHRYDEIGN 1007 Query: 183 EILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHC--------DHRGLPLA 234 I R + WL V + + R D Sbjct: 1008 RIGTVRPDGHAVDWLTYGSGHVHGLMLDGKELVQIERDDLHRETLRTLPSKIDQH----T 1063 Query: 235 LVSTEGATEW---------------CAEYDEWGNLLNEENPHQLQQLIRL 269 G YD G L+ E+ + R Sbjct: 1064 AYDRAGRLAQRTVQRANAPAPLAERRYRYDAAGQLVQIEDNRRGLTDYRY 1113 Score = 66.8 bits (161), Expect = 2e-09, Method: Composition-based stats. Identities = 68/447 (15%), Positives = 108/447 (24%), Gaps = 64/447 (14%) Query: 12 HYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVE---- 67 +R+D GR+ T +G Y YD Q+ L+ T Sbjct: 522 QVAFRHDVRGRIVGITHHDAQGEYV---GTLASYEYDDQNDLIGATDRYGNRREYRYRHH 578 Query: 68 --SRYLYDPLGRRVAKRVWRRERDLTGWMSL-SRKPQVTWYGWDGD-RLTTIQNDRTRIQ 123 +RY D GR V + W D R+ ++ + + Sbjct: 579 LVTRYT-DRTGRGVNLEWNGDGPKAKCFREYADDGSDEVRLAWHPDFRMVSVTDALGNVT 637 Query: 124 TIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLV------QML 177 Y S RV G + R D L Q DG + Q Sbjct: 638 HHY-YDSKGYSFRVIHPDGSE-EWMYRDANDKLVQYIHRDGTVEQMEYDVRGNFVRHQRT 695 Query: 178 DRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPA--RKIHLYHCDHRGLPLAL 235 D E+ D+ + R + + + + V Y D RGL + Sbjct: 696 DGSVVEMAYDQKDQLVRVTDPLGHPWLREYDDAGNMVAEVDPLGHKTEYAYDGRGLLTRI 755 Query: 236 VSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEESGLYYNRHRYYDPLQGRY 295 +G + +YD+ G L + Q E Sbjct: 756 KDAKGGVKA-LKYDDVGQLTGYTDCSGKTSQWAYDAQGRLSE------------------ 796 Query: 296 ITQDPIGLKGGWNFYQYPLNPVQYIDSMGLASKYGHLNNGGYGARPNKPPTPDPSKLPDI 355 +D GG Y+Y N G + + + + Sbjct: 797 -AKD---AAGGVTAYRYGAN--------GQLIEVVSPAGREQLSYDAEGRLLTHIDPLNR 844 Query: 356 AKQLRLPYPIDQASSAPNVFKTFFRALSPYDYTLYCRKWVKPNLTCTPQDDSQYPGMDTK 415 + AS N+ Y Y R N Sbjct: 845 NTRYGYD-----ASGRINIRTDALGQSLSYRYDRLGRIVGLTNQNHAN------YSFRYD 893 Query: 416 TASDYLPQTNWPTTQLPPGYTCAEPYL 442 A + + ++ Y A L Sbjct: 894 VAGRMIEEIDFDGKATRYSYDEASSRL 920 Score = 64.8 bits (156), Expect = 7e-09, Method: Composition-based stats. Identities = 45/282 (15%), Positives = 75/282 (26%), Gaps = 47/282 (16%) Query: 10 DAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESR 69 YRYDR GR+ T+ + + + YD R++ +R Sbjct: 864 GQSLSYRYDRLGRIVGLTNQ---------NHANYSFRYDVAGRMIEEIDFDG----KATR 910 Query: 70 YLYDPLGRRVA--------KRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTR 121 Y YD R+ + S+ + + Y G RL N +R Sbjct: 911 YSYDEASSRLESVDEAGQVMTMSHDRGGRLNGRSVGEEAERFSYDPLG-RLIEASNRYSR 969 Query: 122 IQTIYQP-GSFTPLIRVETATGELAKTQRRSLADTL------QQSGGEDGGSVVFPPVLV 174 +Q + P G+ G D + + G + + V Sbjct: 970 VQRFFDPAGNLVREHHAYDLFGSSRSFVWHHRYDEIGNRIGTVRPDGHAVDWLTYGSGHV 1029 Query: 175 QMLDRLESEILADRVSEESRR--------------WLASCGLTVEQMQNQMDPVYTPARK 220 L E++ + R + + L +Q P R+ Sbjct: 1030 HGLMLDGKELVQIERDDLHRETLRTLPSKIDQHTAYDRAGRLAQRTVQRANAPAPLAERR 1089 Query: 221 IHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQ 262 D G + + YD G LL P Sbjct: 1090 YRY---DAAGQLVQIEDNRRGLTD-YRYDPVGRLLESIGPAG 1127 Score = 59.4 bits (142), Expect = 3e-07, Method: Composition-based stats. Identities = 46/328 (14%), Positives = 83/328 (25%), Gaps = 70/328 (21%) Query: 4 DNRIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQ--- 60 + R + + YD GRL E ++ R R+ +D LV Sbjct: 941 NGRSVGEEAERFSYDPLGRLIEASNRYS---------RVQRF-FDPAGNLVREHHAYDLF 990 Query: 61 YAEPLVESRYLYDPLGRRVAKRVWRRER------------------------------DL 90 + + YD +G R+ Sbjct: 991 GSSRSFVWHHRYDEIGNRIGTVRPDGHAVDWLTYGSGHVHGLMLDGKELVQIERDDLHRE 1050 Query: 91 TGWMSLSRKPQVTWYGWDG----DRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAK 146 T S+ Q T Y G + + Y+ + L+++E L Sbjct: 1051 TLRTLPSKIDQHTAYDRAGRLAQRTVQRANAPAPLAERRYRYDAAGQLVQIEDNRRGLTD 1110 Query: 147 TQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQ 206 + + L+ G F P + + R ++ V + Sbjct: 1111 YRYDPVGRLLESIGPAGKERFAFDPASNIIDPVRVEAPRTESRPSPVRATESTLPAEVPK 1170 Query: 207 MQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQL 266 + + Y + D RG + S G E++ + + ++ Sbjct: 1171 VLGNLLKQYAGE----HFAYDARGNLVHRRSPAGE--QRYEWNAFNRMTAATVDEVARR- 1223 Query: 267 IRLPGQQYDEESGLYYNRHRYYDPLQGR 294 ES RYY GR Sbjct: 1224 ---------SES-------RYYYDALGR 1235 Score = 54.8 bits (130), Expect = 6e-06, Method: Composition-based stats. Identities = 62/483 (12%), Positives = 115/483 (23%), Gaps = 103/483 (21%) Query: 7 IARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLV 66 + R L Y+RHG + ++ YD++ RL + V Sbjct: 473 VTRGHTLLEAYERHGNVFRL------AFVKDRAGNQVTLDYDTEGRL-----HRLIASHV 521 Query: 67 ESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTIY 126 + + +D GR V + + G ++ Y Sbjct: 522 QVAFRHDVRGRIVGITHHDAQGEYVGTLA-----------------------------SY 552 Query: 127 QPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPV------LVQMLDRL 180 + LI G + + R T G ++ + + D Sbjct: 553 EYDDQNDLIGATDRYGNRREYRYRHHLVTRYTDRTGRGVNLEWNGDGPKAKCFREYADDG 612 Query: 181 ESEIL------------ADRVSEESRRWLASCGLTVEQMQNQMDPV----YTPARKIHLY 224 E+ D + + + S G + + + + Sbjct: 613 SDEVRLAWHPDFRMVSVTDALGNVTHHYYDSKGYSFRVIHPDGSEEWMYRDANDKLVQYI 672 Query: 225 HCDHRGLPLAL-VSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEESGLYYN 283 H D G + G D + E Q QL+R+ D L + Sbjct: 673 HRD--GTVEQMEYDVRGNFVRHQRTD---GSVVEMAYDQKDQLVRVT----DP---LGHP 720 Query: 284 RHRYYDPLQGRYIT-QDPIGLKGGWNFYQY-----------------------PLNPVQY 319 R YD G + DP+G K Y Y Y Sbjct: 721 WLREYD-DAGNMVAEVDPLGHKT---EYAYDGRGLLTRIKDAKGGVKALKYDDVGQLTGY 776 Query: 320 IDSMGLASKYGHLNNGGYGARPNKPPTPDPSKLPDIAKQLRLPYPIDQASSAPNVFKTFF 379 D G S++ + G + + + + + P + + + Sbjct: 777 TDCSGKTSQWAYDAQGRLSEAKDAAGGVTAYRYGANGQLIEVVSPAGREQLSYDAEGRLL 836 Query: 380 RALSPYDYTLYCRKWVKPNLTCTPQDDSQYPGMDTKTASDYLPQTNWPTTQLPPGYTCAE 439 + P + + Q + TN Y A Sbjct: 837 THIDPLNRNTRYGYDASGRINIRTDALGQSLSYRYDRLGRIVGLTNQNHANYSFRYDVAG 896 Query: 440 PYL 442 + Sbjct: 897 RMI 899 >UniRef50_A9AE26 Rhs family protein n=10 Tax=cellular organisms RepID=A9AE26_BURM1 Length = 1547 Score = 221 bits (562), Expect = 5e-56, Method: Composition-based stats. Identities = 92/442 (20%), Positives = 149/442 (33%), Gaps = 66/442 (14%) Query: 12 HYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYL 71 YRYD G+L+ D G+ Y YD RL+ P+ + R+ Sbjct: 1076 ERRYRYDAAGQLSRIEDSRKGGI---------DYRYDPVGRLIEAI-----SPVAKERFA 1121 Query: 72 YDPLGRRVAKRVWRRERDL------------------TGWMSLSRKPQVTWYGWDGDRLT 113 +DP V G + + Y G+ L Sbjct: 1122 FDPASNIVDPVRSSDTPASRPSPVRPDSTLPAEVPKVLGNLLKAYAGMHFEYDARGN-LV 1180 Query: 114 TIQNDRTRIQTIYQPGSFTPLIRV---ETATGELAKTQRRSLADTLQQSGGEDGGSVVFP 170 + + Y+ +F L+ ET+ A+ + + + + + Sbjct: 1181 RKRTPAG--EQEYEWDAFNRLLSARVAETSRQSEARYFYDAFGRRIAKEVNGERTVFGWD 1238 Query: 171 PVLVQMLDR----------------LESEILADRVSEESRRWLASCGLTVEQMQNQMDPV 214 + L + V E+ W +S E Q P Sbjct: 1239 GDTLAYESDGERGTHYIYEPGTFVPLAQYVAEPVVGIETPEWKSSDRYVPEADPLQKVPQ 1298 Query: 215 YTPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQ------LQQLIR 268 K+ YHCD G P L +G W A Y WG + +R Sbjct: 1299 RRADAKLFYYHCDQIGTPQLLTDDDGDVVWEASYKAWGEAREVIARASKAAGIVARNSLR 1358 Query: 269 LPGQQYDEESGLYYNRHRYYDPLQGRYITQDPIGLKGGWNFYQYPLNPVQYIDSMGLASK 328 GQQ DEE+GL+YNR+RYYDP GR++++DP+G+ GG N YQY N V ++D +GL + Sbjct: 1359 FQGQQEDEETGLHYNRYRYYDPNSGRFVSKDPVGMVGGINVYQYAPNAVAWVDPLGLRKR 1418 Query: 329 YGHLNNGGYGARPNKPPTPDPSKLPDIAKQLRLPYPIDQASSAPNVFKTFFRALSP---- 384 G G + + + D D + + + + F+ + +P Sbjct: 1419 IGCP--GKFHSFHDFDLPQDKLFASDGVQFRLANKALIERMNTDEAFRRNLLSRNPALLD 1476 Query: 385 YDYTLYCRKWVKPNLTCTPQDD 406 + P +T D+ Sbjct: 1477 WSKKAKDLGSSPPGMTWHHNDE 1498 Score = 87.6 bits (215), Expect = 9e-16, Method: Composition-based stats. Identities = 57/317 (17%), Positives = 95/317 (29%), Gaps = 50/317 (15%) Query: 3 PDNRIARDAH-----YLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYT 57 + R+ R Y YD GR+ + D + + + Y YD RL T Sbjct: 820 AEGRLLRHTDQLNRSTRYSYDAAGRIASRADALGQTI---------AYRYDRLGRLTALT 870 Query: 58 RTQYAEPLVESRYLYDPLGRRVAK-------RVWRRERDLTGWMSLSRKPQVTWYGWDGD 110 +A ++ YDP GR + + ++ +++ +S+ VT D + Sbjct: 871 DANFA----TYQFHYDPAGRLIEEIGFDGKSTRYQYDKESGSLVSVDEAGCVTSVDLDAN 926 Query: 111 RLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFP 170 ++ + + LI + + + +++ + Sbjct: 927 GRL-LKRASGESEERFAYDRSGRLIDAVNRY-SRVQFFFDPVGNLVREHHAYNLFGERRS 984 Query: 171 PVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRG 230 V D L + R + WL V M D R HR Sbjct: 985 YVWHHEYDELGNRRRTVRPDGHAIDWLMYGSGHVHGMLLDGDERVQFERDDL-----HRE 1039 Query: 231 LPLALVSTEGATEWCAEYDEWGNLLNEENPHQ------LQQLIRL--PGQQ---YDEESG 279 L S G YD G +L + +++ R GQ D G Sbjct: 1040 TVRMLSSKVGQ---RTHYDPAGRVLQQTIQRSSSPAPLVERRYRYDAAGQLSRIEDSRKG 1096 Query: 280 LYYNRHRYYDPLQGRYI 296 R YDP GR I Sbjct: 1097 GIDYR---YDP-VGRLI 1109 Score = 73.3 bits (178), Expect = 2e-11, Method: Composition-based stats. Identities = 38/261 (14%), Positives = 63/261 (24%), Gaps = 39/261 (14%) Query: 13 YLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYLY 72 +RYD GR+ E D Y Y +L P Y Sbjct: 773 TEWRYDDIGRVVEAKDAA---------GGVVAYGYGPNGQLSEIR-----SPAGVEHVQY 818 Query: 73 DPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQPGSFT 132 D GR + + + T Y +D + D Y+ Sbjct: 819 DAEGRLLRHT--------------DQLNRSTRYSYDAAGRIASRADALGQTIAYRYDRLG 864 Query: 133 PLIRVETATGELAKTQRRSLADTLQQSG-GEDGGSVVFPPVLVQMLDRLESEILADRVSE 191 L + A + +++ G + ++ E+ + + Sbjct: 865 RLTALTDANFATYQFHYDPAGRLIEEIGFDGKSTRYQYDKESGSLVSVDEAGCVTSVDLD 924 Query: 192 ESRRWLASCGLTVEQMQNQMDPVYTPARKIHL----YHCDHRGLPLA------LVSTEGA 241 + R L E+ + D G + L + Sbjct: 925 ANGRLLKRASGESEERFAYDRSGRLIDAVNRYSRVQFFFDPVGNLVREHHAYNLFGERRS 984 Query: 242 TEWCAEYDEWGNLLNEENPHQ 262 W EYDE GN P Sbjct: 985 YVWHHEYDELGNRRRTVRPDG 1005 Score = 66.0 bits (159), Expect = 3e-09, Method: Composition-based stats. Identities = 55/401 (13%), Positives = 102/401 (25%), Gaps = 70/401 (17%) Query: 14 LYRYDRHGRLTEKTDLIPEGVIRTD-DERTHRYHYDSQHRLVHYTRTQYA---------- 62 Y YD +G L D RY D R + Sbjct: 536 SYEYDANGDLVRAVDRHGNARTYQYHRHLVTRYT-DRTGRGMSLEWDGADAEDNADAKCI 594 Query: 63 ---------------EPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGW 107 P + Y+ D LG+ + + + + + Sbjct: 595 REYADDGSLDIRLAWNPNIRLTYVTDALGQMT-RYYFNIHGYVYRIVYPDGNQEWFRRDA 653 Query: 108 DGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSV 167 + + + I+ D + + + L+R E A G + + ++ D Sbjct: 654 NHNLVLHIRQDGSIEHR--EYDARGNLVRHERADGSIIEMAYDDKDQMIR---LVDPNGH 708 Query: 168 VFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYH-- 225 V+ + +E + ++ + + Y A ++ Y Sbjct: 709 VWQRKYDDAGNLVEEIDPLEHATKYAYNDKGLPTQITDAKGGTKTLEYNDAGQLTSYTDC 768 Query: 226 --------CDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEE 277 D G + G Y G L +P ++ + + Sbjct: 769 SGKKTEWRYDDIGRVVEAKDAAGGVVA-YGYGPNGQLSEIRSPAGVEHVQYDAEGRLLRH 827 Query: 278 SGLYYNRHRY-YDPLQGRYITQ-DPIGLKGGWNFYQYPLNPVQYIDSMGLASKYGHLNNG 335 + RY YD GR ++ D +G Y+Y D +G + N Sbjct: 828 TDQLNRSTRYSYDAA-GRIASRADALGQTIA---YRY--------DRLGRLTALTDANFA 875 Query: 336 GYGARPNKPPTPDPSKLPDIAKQLRLPYPIDQASSAPNVFK 376 Y D A +L D S+ K Sbjct: 876 TY------------QFHYDPAGRLIEEIGFDGKSTRYQYDK 904 Score = 61.7 bits (148), Expect = 6e-08, Method: Composition-based stats. Identities = 58/459 (12%), Positives = 111/459 (24%), Gaps = 76/459 (16%) Query: 10 DAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESR 69 A Y +D + D + + T YD+ RL Sbjct: 455 WATIAYGHDVLHVYERRGDAFRLAMQKDRAGNTVTLDYDALDRLARLI------------ 502 Query: 70 YLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQPG 129 D G +A R R + L ++ R Y+ Sbjct: 503 ---DASGNVLALEHDRHGRIVQIEQVL-------------------KDGERRTLASYEYD 540 Query: 130 SFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRV 189 + L+R G Q T G S+ + + + Sbjct: 541 ANGDLVRAVDRHGNARTYQYHRHLVTRYTDRTGRGMSLEWDGADAEDNADAKCIREYADD 600 Query: 190 SEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEW----- 244 R + + + + + + + Y + G +V +G EW Sbjct: 601 GSLDIRLAWNPNIRLTYVTDAL------GQMTRYYF-NIHGYVYRIVYPDGNQEWFRRDA 653 Query: 245 ---------------CAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEESGLY----YNRH 285 EYD GNL+ E + + D+ L + Sbjct: 654 NHNLVLHIRQDGSIEHREYDARGNLVRHERADGSIIEMAYDDK--DQMIRLVDPNGHVWQ 711 Query: 286 RYYDPLQGRYITQ-DPIGLKGGWNFYQYPLN---PVQYIDSMGLASKYGHLNNGGYGARP 341 R YD G + + DP+ Y Y + P Q D+ G + + G + Sbjct: 712 RKYD-DAGNLVEEIDPLEHAT---KYAY-NDKGLPTQITDAKGGTKTLEYNDAGQLTSYT 766 Query: 342 NKPPTPDPSKLPDIAKQLRLPYPIDQASSAPNVFKTFFRALSPYDYTLYCRKWVKPNLTC 401 + + DI + + + + + + + L Sbjct: 767 DCSGKKTEWRYDDIGRVVEAKDAAGGVVAYGYGPNGQLSEIRSPAGVEHVQYDAEGRLLR 826 Query: 402 TPQDDSQYPGMDTKTASDYLPQTNWPTTQLPPGYTCAEP 440 ++ A + + + Y Sbjct: 827 HTDQLNRSTRYSYDAAGRIASRADALGQTIAYRYDRLGR 865 Score = 61.7 bits (148), Expect = 6e-08, Method: Composition-based stats. Identities = 39/285 (13%), Positives = 66/285 (23%), Gaps = 69/285 (24%) Query: 16 RYDRHGRLTEKT------------DLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAE 63 YD G L D + + + YD LV Sbjct: 671 EYDARGNLVRHERADGSIIEMAYDDKDQMIRLVDPNGHVWQRKYDDAGNLVEEIDPL--- 727 Query: 64 PLVESRYLYDPLGRRVAKR---------VWRRERDLTGWMSLSRKPQVTWYGWDGDRLTT 114 ++Y Y+ G + LT + S K Y G + Sbjct: 728 -EHATKYAYNDKGLPTQITDAKGGTKTLEYNDAGQLTSYTDCSGKKTEWRYDDIGRVVEA 786 Query: 115 IQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLV 174 + Y P L + + G + Q + L+ + + + Sbjct: 787 KDAAGGVVAYGYGPN--GQLSEIRSPAG-VEHVQYDAEGRLLRHTDQLNRST-------- 835 Query: 175 QMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLA 234 R+ + + + + Y D G A Sbjct: 836 --------------------RYSYDAAGRIASRADAL-------GQTIAYRYDRLGRLTA 868 Query: 235 LVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEESG 279 L + YD G L+ E + D+ESG Sbjct: 869 LTDAN-FATYQFHYDPAGRLIEEIGFDGKSTRYQY-----DKESG 907 >UniRef50_C6AKX3 Rhs family protein n=4 Tax=Aggregatibacter aphrophilus NJ8700 RepID=C6AKX3_AGGAN Length = 1917 Score = 220 bits (561), Expect = 7e-56, Method: Composition-based stats. Identities = 77/357 (21%), Positives = 124/357 (34%), Gaps = 36/357 (10%) Query: 4 DNRIARDAHY---LYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQ 60 I+R Y YD GRL ++ + + Y YD L Sbjct: 1431 HREISRSQGRLNGRYYYDDMGRLVQQ--QAGLANQQNAVQIDRTYGYDELGHLSQTRTYF 1488 Query: 61 YAEP---LVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQV--------------- 102 +P +++Y YD LG R+AK + + S Sbjct: 1489 PHKPFDAPQQTQYQYDNLG-RIAKADSQGHSQHFYFDPASNLINDPTEKVIDNRVVNYRG 1547 Query: 103 TWYGWDGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETAT---GELAKTQRRSLADTLQQS 159 + +D Y L++ + E + L + +S Sbjct: 1548 IRFTYDSLGNLVECQAANGDYQRYTYDLKNRLVQADIRDRYKAESWVYEYDPLGRRVAKS 1607 Query: 160 GGEDGGSVVFPPVLVQMLDRLESEILAD------RVSEESRRWLASCGLTVEQMQNQMDP 213 G + L EI ++ + ++ S + E + Sbjct: 1608 KLNKQGEQQLHTQFIWDGSHLVQEIRTGNHQQNAEKTDRTFTYIYSEPGSYEPLAQCYKD 1667 Query: 214 VYTPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEE---NPHQLQQLIRLP 270 I+ +H D G+P + ++G W YD WG+L+ + Q RL Sbjct: 1668 GDNAEHTINYFHSDQIGIPREMTDSDGKLIWKGRYDAWGSLIRDSYRETASDSHQPFRLQ 1727 Query: 271 GQQYDEESGLYYNRHRYYDPLQGRYITQDPIGLKGGWNFYQYPLNPVQYIDSMGLAS 327 Q +DEE+GL+YN RYY+P+ GR+ITQDPI L GG N Y++ D +GL + Sbjct: 1728 NQYFDEETGLHYNFFRYYEPVLGRFITQDPIKLAGGNNLYRFEGTVQNQTDPLGLFA 1784 Score = 86.8 bits (213), Expect = 2e-15, Method: Composition-based stats. Identities = 45/290 (15%), Positives = 83/290 (28%), Gaps = 57/290 (19%) Query: 18 DRHGRLTEKTDLIPEGVIRTDDERTH------------RYHYDSQHRLVHYTRTQYAEPL 65 D+ GR+ +T + + + + YD+ RL+ T Sbjct: 1038 DKLGRVLRQTSPSGQTSYFEYNPQGQMTKLTRPDNAMLYFLYDNDGRLIGQTDALGN--- 1094 Query: 66 VESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTI 125 +RY YD G + + L Q + Y ++ L + D T+ Sbjct: 1095 -MTRYRYDDSGNLIER--------------LDALSQKSVYAYNDKGLLSSSTDPLGNNTL 1139 Query: 126 YQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQML-----DRL 180 + L +V +G + L Q+ + Q++ ++ Sbjct: 1140 FAYDENFQLNQVTDCSGNQTCFKYNELGQLTSQTDALGNTTAYQYNDRQQLIAVLLPNQS 1199 Query: 181 ESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHL--YHCDHRGLPLALV-- 236 ++ D+V S+ T Q + P + H YH D G + L Sbjct: 1200 QTRYQYDKVGRLSQVIDPQGNQTSYQYRIDGLPTSKTNAQGHHFQYHYDQAGRLVGLTNE 1259 Query: 237 ---------STEGATEW---------CAEYDEWGNLLNEENPHQLQQLIR 268 + W EYD G L+ + + R Sbjct: 1260 NHATYRFVYDEQDRLIWEKGFDDKLTQYEYDAKGQLIRRTDYGVTEAPKR 1309 Score = 79.5 bits (194), Expect = 3e-13, Method: Composition-based stats. Identities = 67/450 (14%), Positives = 131/450 (29%), Gaps = 42/450 (9%) Query: 13 YLYRYDRHGRLTEKTDLIPEGVIRTDDE--RTHRYHYDSQHRLVHYTRTQYAEPLVESRY 70 Y YD G+L +TD + + RT + Y+ ++ Q E + + Sbjct: 1285 TQYEYDAKGQLIRRTDYGVTEAPKRNKPAIRTAEFKYNQLGQMTEEHIRQ-GEQSSRTTF 1343 Query: 71 LYDPLGRRVAKRVWRRERDLTGWMS-----LSRKPQVTWYGWDGDRLTTIQNDRTRIQTI 125 +D G+ + D + + + Y +D + + Sbjct: 1344 SFDLNGQMTQVACGGQHIDFRYDATGRLIEEAHGDKKIAYEYDANNNRLKTVLPSGDSIR 1403 Query: 126 YQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEIL 185 Y L ++ + +++ +R L + +S G G + + +++ + Sbjct: 1404 YFYYGTGHLSGIKLNSQLISEMERDDLHREISRSQGRLNGRYYYD-DMGRLVQQQAGLAN 1462 Query: 186 ADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWC 245 + R + + Q + A + Y D+ G A ++G Sbjct: 1463 QQNAVQIDRTYGYDELGHLSQTRTYFPHKPFDAPQQTQYQYDNLGRI-AKADSQGH-SQH 1520 Query: 246 AEYDEWGNLLNEENPHQLQQL------IRLPGQQYDEESGLYYNRH------RY-YDPLQ 292 +D NL+N+ + IR YD L + RY YD Sbjct: 1521 FYFDPASNLINDPTEKVIDNRVVNYRGIRFT---YDSLGNLVECQAANGDYQRYTYDLKN 1577 Query: 293 GRYITQDPIGLKGGWNF-YQYPLNPVQYIDSMGLASKYGHLNNGGYGARPNKPPTPDPSK 351 R + D ++ Y+Y D +G LN G + T Sbjct: 1578 -RLVQADIRDRYKAESWVYEY--------DPLGRRVAKSKLNKQG----EQQLHTQFIWD 1624 Query: 352 LPDIAKQLRLPYPIDQASSAPNVFKTFFRALSPYDYTLYCRKWVKPNLTCTPQDDSQYPG 411 + +++R A F + Y+ C K S G Sbjct: 1625 GSHLVQEIRTGNHQQNAEKTDRTFTYIYSEPGSYEPLAQCYKDGDNAEHTINYFHSDQIG 1684 Query: 412 MDTKTASDYLPQTNWPTTQLPPGYTCAEPY 441 + + +D + W G + Y Sbjct: 1685 IP-REMTDSDGKLIWKGRYDAWGSLIRDSY 1713 Score = 75.2 bits (183), Expect = 5e-12, Method: Composition-based stats. Identities = 59/397 (14%), Positives = 105/397 (26%), Gaps = 94/397 (23%) Query: 5 NRIAR--DAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYA 62 N++ ++Y+ G+LT +TD + T Y Y+ + +L+ Sbjct: 1149 NQVTDCSGNQTCFKYNELGQLTSQTDALGN---------TTAYQYNDRQQLIAVLLPN-- 1197 Query: 63 EPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRI 122 ++RY YD +GR + + T Y + D L T + + Sbjct: 1198 --QSQTRYQYDKVGRL--------------SQVIDPQGNQTSYQYRIDGLPTSKTNAQGH 1241 Query: 123 QTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLES 182 Y L+ + + + + G +D + Q++ R + Sbjct: 1242 HFQYHYDQAGRLVGLTNENHATYRFVYDEQDRLIWEKGFDDKLTQYEYDAKGQLIRRTDY 1301 Query: 183 EILAD--RVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLAL----- 235 + R R + + + +R + D G + Sbjct: 1302 GVTEAPKRNKPAIRTAEFKYNQLGQMTEEHIRQGEQSSRTTFSF--DLNGQMTQVACGGQ 1359 Query: 236 -----VSTEGATEWC--------AEYDEWGNLLNEENPHQLQQLIRL--PGQ-------- 272 G EYD N L P G Sbjct: 1360 HIDFRYDATGRLIEEAHGDKKIAYEYDANNNRLKTVLPSGDSIRYFYYGTGHLSGIKLNS 1419 Query: 273 ------QYDEESGLY--------YNRHRYYDPLQGRYITQDPIGLKGGWN------FYQY 312 + D+ L+ RYY GR + Q GL N Y Y Sbjct: 1420 QLISEMERDD---LHREISRSQGRLNGRYYYDDMGRLVQQ-QAGLANQQNAVQIDRTYGY 1475 Query: 313 PLNPVQYIDSMG-LASKYGHLNNGGYGARPNKPPTPD 348 D +G L+ + + + A D Sbjct: 1476 --------DELGHLSQTRTYFPHKPFDAPQQTQYQYD 1504 Score = 50.2 bits (118), Expect = 2e-04, Method: Composition-based stats. Identities = 55/433 (12%), Positives = 106/433 (24%), Gaps = 75/433 (17%) Query: 23 LTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYLYDPLGRRVAKR 82 L + T L + Y Y+++ L+ T D LG V K Sbjct: 907 LKKSTALSHTSDESFLGRKLVSYRYNTEGDLIEVT---------------DGLGNLVRKF 951 Query: 83 VWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQPGSFTPLIRV---ET 139 +R + L D + + Y+ +TP +V T Sbjct: 952 GYR------------------------NHLMISHEDSAGLISTYEYDHYTPNGKVTLNTT 987 Query: 140 ATGELAKTQRRSLADTLQQSGGED-----GGSVVFPPVLVQMLDRLESEILADRVSEESR 194 GE + + + G ++ + E Sbjct: 988 NLGERWEFAYFPTYTVVTDALGRREEYHFDEHNELVKLVSTDGQAMLLERDKLGRVLRQT 1047 Query: 195 RWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNL 254 Q QM + P + + D+ G + G YD+ GNL Sbjct: 1048 SPSGQTSYFEYNPQGQMTKLTRPDNAMLYFLYDNDGRLIGQTDALGNMT-RYRYDDSGNL 1106 Query: 255 LNEENPHQLQQLIRLPGQQYDEESGLYYNRHRYYDPLQGRYITQDPIGLKGGWNFYQYPL 314 + + + + + + DP+G + Y Sbjct: 1107 IERLDALSQKSVYAYNDKGLLSS-------------------STDPLGNNT---LFAYDE 1144 Query: 315 N--PVQYIDSMGLASKYGHLNNGGYGARPNKPPTPDPSKLPD--IAKQLRLPYPIDQASS 370 N Q D G + + + G ++ + + D + LP Sbjct: 1145 NFQLNQVTDCSGNQTCFKYNELGQLTSQTDALGNTTAYQYNDRQQLIAVLLPNQSQTRYQ 1204 Query: 371 APNVFKTFFRALSPYDYTLYCRKWVKPNLTCTPQDDSQYPGMDTKTASDYLPQTNWPTTQ 430 V + + + P + + T + A + TN Sbjct: 1205 YDKVGRLS-QVIDPQGNQTSYQYRIDGLPTSKTNAQGHHFQYHYDQAGRLVGLTNENHAT 1263 Query: 431 LPPGYTCAEPYLF 443 Y + ++ Sbjct: 1264 YRFVYDEQDRLIW 1276 >UniRef50_D1T3N5 YD repeat protein n=1 Tax=Acidovorax avenae subsp. avenae ATCC 19860 RepID=D1T3N5_9BURK Length = 598 Score = 220 bits (561), Expect = 7e-56, Method: Composition-based stats. Identities = 114/409 (27%), Positives = 155/409 (37%), Gaps = 41/409 (10%) Query: 2 WPDNRIA----------RDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQH 51 WP NRI + YRYD G + D R R YD+ H Sbjct: 116 WPGNRIGWSTPERDSDGQGTPIRYRYDAFGNRVQALHA---------DGRAQRLRYDALH 166 Query: 52 RLVHYTRTQYAEPLVE--SRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDG 109 +L + + + + Y YDP GRR+A+ V R G S T+ GWDG Sbjct: 167 QLREVWQREGTRGAWQRVACYRYDPFGRRLARTVIGDSRYNHGAALGSAA--TTYAGWDG 224 Query: 110 DRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQR---------RSLADTLQQSG 160 DRL ++ + +Y+P SF PL+R+E Q S A L Sbjct: 225 DRLMHVEGPQGLQHILYEPDSFVPLLRLERDRAIPTPVQAMFALENQGGESHAAALFGEL 284 Query: 161 GEDGGSVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARK 220 + + + ++ + + Q + A + Sbjct: 285 PRAQREWLEQTLNDALGPHGDALRARLQAGLPEETGVLLSAGLRSVHQQRQSAAQAHATR 344 Query: 221 IHLYHCDHRGLPLALVSTEG----ATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQYDE 276 I CDH G P+ALV G W A Y WG + E +PH + Q IR GQQ+D Sbjct: 345 IRHVLCDHLGTPIALVDANGPQAGLVTWAATYHAWGAVREEYDPHGIGQDIRFQGQQFDA 404 Query: 277 ESGLYYNRHRYYDPLQGRYITQDPIGLKGGWNFYQYPL-NPVQYIDSMGLASKYGHLNNG 335 E+GL+YNR RYYDP+ G+Y+TQDPIGLKGG N Y +P D GL K G Sbjct: 405 ETGLHYNRFRYYDPMLGQYVTQDPIGLKGGLNKSNYSGSSPAINCDPKGLDFKDKATKGG 464 Query: 336 GYGARPNKPPTPDPSKLPDIAKQLRLPYPIDQASSAPNVFKTFFRALSP 384 G S +K+ L I A + P Sbjct: 465 EVGYEV----YDAKSTYESGSKRACLIRQITNRQIAYQELLGKMGSGKP 509 Score = 63.7 bits (153), Expect = 2e-08, Method: Composition-based stats. Identities = 38/235 (16%), Positives = 62/235 (26%), Gaps = 41/235 (17%) Query: 7 IARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLV 66 ++ A Y YD G+L RY YD+ RL R V Sbjct: 4 LSTLAQRRYWYDPLGQLVGVQTP----------GEATRYGYDAWQRLSGLHRAGQGTQEV 53 Query: 67 ESRYLYDPLGRRV------------------------AKRVWRRERDLTGWMSLSRKPQV 102 + DP G R+ + + G R V Sbjct: 54 RQHWALDPAGNRLPAPPEAGVMAPHADRQAWAREVRDHLQDPDFDLLRAGDGPGERAGPV 113 Query: 103 TWYGWDGDRLTTIQ----NDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQ 158 T W G+R+ +D Y+ +F ++ A G A+ R L++ Sbjct: 114 TH--WPGNRIGWSTPERDSDGQGTPIRYRYDAFGNRVQALHADG-RAQRLRYDALHQLRE 170 Query: 159 SGGEDGGSVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDP 213 +G + V D + + + A+ G Sbjct: 171 VWQREGTRGAWQRVACYRYDPFGRRLARTVIGDSRYNHGAALGSAATTYAGWDGD 225 >UniRef50_Q6D1M4 Rhs protein n=5 Tax=Enterobacteriaceae RepID=Q6D1M4_ERWCT Length = 1618 Score = 220 bits (561), Expect = 8e-56, Method: Composition-based stats. Identities = 95/422 (22%), Positives = 144/422 (34%), Gaps = 64/422 (15%) Query: 3 PDNRIARDAHYLYRYDRHGRLTEKTD------------LIPEGVIRTDDERTHR---YHY 47 D R+ Y+YD RLT TD R D+ R + + Y Sbjct: 1157 ADGRVNDVLERRYQYDVLDRLTGITDSHWGEQAFRLNGAGQMTAERRDEGRRRQARLFGY 1216 Query: 48 DSQHRLVHYTRTQYA--------EPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRK 99 DS+ L ++ + +V+S YD GR + + + D G +++ R Sbjct: 1217 DSEQNLCEVSQIAPGLDETLKVQDAVVQSSARYDAAGRVIERGHTQYRYDDCGRLAMKR- 1275 Query: 100 PQVTWYGWDGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQS 159 + +T + L+RV G + + + + + Sbjct: 1276 --------------ETRPGFRPKETYFDWDVQDRLVRVSLPDGARWRYRYDAFGRRINKV 1321 Query: 160 GGED--GGSVVFPPVLVQMLDRLESE--ILADRVSEESRRWLASCGLTVEQMQNQMDPVY 215 V D+L + AD + +W+ G Q + Sbjct: 1322 REGQVPSAQAVARVAYRWDGDQLIGQHQYRADGSAAREVQWVYEPGSFRPLAQLEAQG-- 1379 Query: 216 TPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENP------------HQL 263 + ++H D G L S EG W E WG E P ++ Sbjct: 1380 -DSTQLHYIVTDLTGTARELCSEEGEIRWRGEQGLWGAHREERRPIPLRRYLGDAANEEV 1438 Query: 264 QQLIRLPGQQYDEESGLYYNRHRYYDPLQGRYITQDPIGLKGGWNFYQYPLNPVQYIDSM 323 +R GQ YD E+GLYYNRHRYYD G+Y++ DPIGL GG Y Y NP+ ++D + Sbjct: 1439 YCELRYQGQLYDAETGLYYNRHRYYDAESGQYLSPDPIGLAGGKRAYGYVKNPLSWVDPL 1498 Query: 324 GLASKYGHLNNGGYGARPNKPPTPDPSKLPDIAKQLRLPYPIDQASSAPNVFKTFFRALS 383 GL K G NG K + + DI P P K + Sbjct: 1499 GLTPKEG--KNGSDKGPDKKNSRAKINNIEDI-----FDNPDVLKGHTPESLKEELGGIP 1551 Query: 384 PY 385 Sbjct: 1552 EG 1553 Score = 72.1 bits (175), Expect = 4e-11, Method: Composition-based stats. Identities = 32/251 (12%), Positives = 65/251 (25%), Gaps = 29/251 (11%) Query: 15 YRYDRHGRLTEKTDLIPEGVIRT----------------DDERTHRYHYDSQHRLVHYTR 58 +RYD RLTE+ GV +D ++ YD + L T Sbjct: 863 FRYDDLDRLTERHIGHEAGVQVRRWEYDCVRESPSKVVYEDGSETQFGYDVEGNLTAVTD 922 Query: 59 TQYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMS-------LSRKPQVTWYGWDGDR 111 ++ Y + + + + + + YG+D Sbjct: 923 ALG----QRYQFRYGAFDNLLEATDPLGATVRYHYNAEAEFAGVTNSQGRDWTYGFDHSG 978 Query: 112 LTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPP 171 + + Y+ L++ G + + + + G Sbjct: 979 RLSEERHYDGRVYRYRYDVADRLVQRTAPDGSALHYEHDTAGRITRITARRADGETDGIT 1038 Query: 172 VLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGL 231 L + ++ + E + + +T E + + A D Sbjct: 1039 ELEYDVAGRLTQAASPDAVVE-YVYNRAGQVTSETVNGEAVQSGYDAGGQRAIV-DGILA 1096 Query: 232 PLALVSTEGAT 242 PL L G Sbjct: 1097 PLQLAWQSGRL 1107 Score = 72.1 bits (175), Expect = 4e-11, Method: Composition-based stats. Identities = 48/311 (15%), Positives = 74/311 (23%), Gaps = 54/311 (17%) Query: 10 DAHYLYRYDRHGRLTEKTDLIPEGVIR-----------TDDERTHRYHYDSQHRLVHYTR 58 Y D + K + Y + ++ Sbjct: 712 GGVISYVRDERNNILLKRTPDGGETLFEWVDNQLVAETDPLGGRTAYQRNDWGQVTEVAL 771 Query: 59 TQYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQND 118 A +Y YD G+ +A Y + ND Sbjct: 772 PDGA----THQYAYDENGQLLAYTDP--------------LCSEWHYQRNAAGQVVEVND 813 Query: 119 RTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLD 178 + +Y G L V G + + + L ++ V+F LD Sbjct: 814 PEGREWLYSYGETGQLATVIGPDG-VLQRYHYNRRGLLSSLERDNALPVMFRYD---DLD 869 Query: 179 RLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVST 238 RL + + RRW C D T D G A+ Sbjct: 870 RLTERHIGHEAGVQVRRWEYDCVRESPSKVVYEDGSETQFG------YDVEGNLTAVTDA 923 Query: 239 EGATEWCAEYDEWGNLLNEENPHQLQQLIRL----------PGQQYDEESGLYYNRH--- 285 G + Y + NLL +P Q D G ++ Sbjct: 924 LGQ-RYQFRYGAFDNLLEATDPLGATVRYHYNAEAEFAGVTNSQGRDWTYGFDHSGRLSE 982 Query: 286 -RYYDPLQGRY 295 R+YD RY Sbjct: 983 ERHYDGRVYRY 993 Score = 60.2 bits (144), Expect = 1e-07, Method: Composition-based stats. Identities = 54/362 (14%), Positives = 92/362 (25%), Gaps = 95/362 (26%) Query: 6 RIARDAH-YLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEP 64 R A D Y +D GR+T T +G D T YD RL A P Sbjct: 1004 RTAPDGSALHYEHDTAGRITRITARRADGET---DGITE-LEYDVAGRLTQA-----ASP 1054 Query: 65 LVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRK------------------------- 99 Y+Y+ G+ ++ V R Sbjct: 1055 DAVVEYVYNRAGQVTSETVNGEAVQSGYDAGGQRAIVDGILAPLQLAWQSGRLSSLGIGS 1114 Query: 100 --PQVTWYGWDGDRLTTIQNDRTRIQT--------------------------IYQPGSF 131 P + G+ ++ YQ Sbjct: 1115 HQPLQFSHTAAGEEQRRSNGSGFALRHEWSPTGLLQRQALEGADGRVNDVLERRYQYDVL 1174 Query: 132 TPLIRVETATGELAKTQRRSLAD--TLQQSGGEDGGSVVFPPVLVQML--------DRLE 181 L + + + ++ G + +F Q L E Sbjct: 1175 DRLTGITDSHWGEQAFRLNGAGQMTAERRDEGRRRQARLFGYDSEQNLCEVSQIAPGLDE 1234 Query: 182 SEILADRVSEESRRWLASCGLTVE---QMQNQMDPVYTPARKIH--------LYHCDHRG 230 + + D V + S R+ A+ + Q + R+ + D + Sbjct: 1235 TLKVQDAVVQSSARYDAAGRVIERGHTQYRYDDCGRLAMKRETRPGFRPKETYFDWDVQD 1294 Query: 231 LPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQ-------LIRLPGQQYDEESGLYYN 283 + + +GA W YD +G +N+ Q+ R G D+ G + Sbjct: 1295 RLVRVSLPDGA-RWRYRYDAFGRRINKVREGQVPSAQAVARVAYRWDG---DQLIGQHQY 1350 Query: 284 RH 285 R Sbjct: 1351 RA 1352 Score = 59.8 bits (143), Expect = 2e-07, Method: Composition-based stats. Identities = 46/274 (16%), Positives = 69/274 (25%), Gaps = 33/274 (12%) Query: 3 PDNRIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYA 62 PDNR+ + T L R + Y YDS L+ + Sbjct: 599 PDNRLIHVETHR---------QRITCLTLCDTHRKPLKTLASYTYDSLGHLLSVRADEGR 649 Query: 63 EPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRI 122 Y Y E L W L+ Y G R+ + Sbjct: 650 N----FDYRY------------SPEGWLLRWSDLALTWVEHDYDKKG-RVIRDRTSEGYW 692 Query: 123 QTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVF--PPVLVQMLDRL 180 ++ T + G + R + L + + G ++ LV D L Sbjct: 693 PGRFEYDDDTLTSHYYSGFGGVISYVRDERNNILLKRTPDGGETLFEWVDNQLVAETDPL 752 Query: 181 ESEILADRVSEESRRWLASCGLTVEQMQNQMDPVY----TPARKIHLYHCDHRGLPLALV 236 R +A Q + P Y + G + + Sbjct: 753 GGRTAYQRNDWGQVTEVALPDGATHQYAYDENGQLLAYTDPLCSEWHYQRNAAGQVVEVN 812 Query: 237 STEGATEWCAEYDEWGNLLNEENPHQLQQLIRLP 270 EG EW Y E G L P + Q Sbjct: 813 DPEGR-EWLYSYGETGQLATVIGPDGVLQRYHYN 845 Score = 53.7 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 31/204 (15%), Positives = 53/204 (25%), Gaps = 26/204 (12%) Query: 4 DNRIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYT-RTQYA 62 D R+ Y YRYD RL ++T D Y +D+ R+ T R Sbjct: 987 DGRV-----YRYRYDVADRLVQRT---------APDGSALHYEHDTAGRITRITARRADG 1032 Query: 63 EPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQV-------TWYGWDGDRLTTI 115 E + YD GR + + + + Y G R Sbjct: 1033 ETDGITELEYDVAGRLTQAASPDAVVEYVYNRAGQVTSETVNGEAVQSGYDAGGQRAIV- 1091 Query: 116 QNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQ 175 D S L + + + + + + ++S G Sbjct: 1092 --DGILAPLQLAWQS-GRLSSLGIGSHQPLQFSHTAAGEEQRRSNGSGFALRHEWSPTGL 1148 Query: 176 MLDRLESEILADRVSEESRRWLAS 199 + + RR+ Sbjct: 1149 LQRQALEGADGRVNDVLERRYQYD 1172 >UniRef50_B3PEN8 Rhsfamily protein n=2 Tax=Cellvibrio japonicus Ueda107 RepID=B3PEN8_CELJU Length = 1401 Score = 220 bits (561), Expect = 8e-56, Method: Composition-based stats. Identities = 87/435 (20%), Positives = 147/435 (33%), Gaps = 49/435 (11%) Query: 8 ARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVE 67 A +Y YD + + Y YD+ +RL + + Sbjct: 980 TELAKAVYEYDLEQNIKKIERGEGIF----------NYGYDNLYRLTTADSPE-GYAAND 1028 Query: 68 SRYLYDPLGRRVAKRVWRRERDLTGWMSLS----RKPQVTWYGWDGDRLTTIQNDRTRIQ 123 + YD +G R + + T Y ++ + T Q + Sbjct: 1029 ETFGYDGVGNRTTHTENGISANQSYNQKNQLQAIDDANDTTYTYNANGHTKTQTKNSITT 1088 Query: 124 TIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESE 183 Y+ LI V+ +A+ ++++ ++ + + Sbjct: 1089 -EYRYNHEERLIEVKRDDTTIAEYAYNPHGQRVKKTVNGVTTWYLYNGNGLAAEYSSTGQ 1147 Query: 184 ILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATE 243 ++ + + W+ T A +++ YH DH G P ++ G Sbjct: 1148 LIKEYHFHPQKTWMTDPLF-----------QRTAAGEVYYYHNDHLGTPQQMLDDAGNIV 1196 Query: 244 WCAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEESGLYYNRHRYYDPLQGRYITQDPIGL 303 W A+Y +G ++ +R PGQ +D E+GL++N R YD GRYI DPIGL Sbjct: 1197 WEAQYSAFGK--AHITIDTVENNLRFPGQYFDSETGLHHNYFRDYDSALGRYIQSDPIGL 1254 Query: 304 KGGWNFYQYPL-NPVQYIDSMGLASKYGHLNN------GGYGARPNKPPTPDPSKLPDIA 356 GG+N Y Y NP ID +GL N G N P+K+ + Sbjct: 1255 GGGFNTYVYAYQNPAVLIDPLGLYVPSDLPENCKVITTGSGIRDENDVKMGPPTKVFQVI 1314 Query: 357 -------KQLRLPYPIDQASSAPNVFKTFFRALSPYDYTLYCRKWVKPNLTCTPQDDSQY 409 K++R +D ++K Y Y Y KW+ + C +D+ Sbjct: 1315 IPFIKFKKKVRDHNDVDGKILKYELWKQTIT----YMYKSY--KWMTYYVECQEEDECGN 1368 Query: 410 PGMDTKTASDYLPQT 424 T Y Q Sbjct: 1369 HLPPTIIPGGYDEQL 1383 Score = 66.4 bits (160), Expect = 2e-09, Method: Composition-based stats. Identities = 42/284 (14%), Positives = 64/284 (22%), Gaps = 31/284 (10%) Query: 12 HYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRL-VHYTRTQYAEP--LVES 68 Y YD G L + T DERT RY YD ++ T A L + Sbjct: 446 TTTYEYDTSGNLITLVEAKG-----TPDERTTRYTYDEFGQIKTKITGESVANNTELAVT 500 Query: 69 RYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQ----------------VTWYGWDGDRL 112 Y YD G + Q +D Sbjct: 501 YYEYDQYGNIIQVMDPEGNITHYSDHDALGNAQTIIDARAHLLPVVEQYTWKNTYDAAGN 560 Query: 113 TTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPP- 171 + D Y L V A G + L + + + + Sbjct: 561 LLTRRDPYNKGETYTYTKTGDLETVIAAGGSKVTLTSNANGQPLTITDDNNKVTKLQYDK 620 Query: 172 ----VLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCD 227 + + +S+ D R T + L D Sbjct: 621 AGRLTVTTDANGNKSQTAYDAQGRVFRSVDGEGNTTQYNYVEDLLRSIQYPTYKELLEYD 680 Query: 228 HRGLPLALVST--EGATEWCAEYDEWGNLLNEENPHQLQQLIRL 269 +R YD GN+ N + + + Sbjct: 681 NRNRVKQTTQQANSRNYIRKHGYDPLGNITNSTDAQDNETVYEY 724 Score = 66.4 bits (160), Expect = 2e-09, Method: Composition-based stats. Identities = 38/282 (13%), Positives = 74/282 (26%), Gaps = 30/282 (10%) Query: 8 ARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVE 67 A Y YD++G + + D +D D+ + V Sbjct: 495 TELAVTYYEYDQYGNIIQVMDPEGNITHYSDH--------DALGNAQTIIDARAHLLPVV 546 Query: 68 SRY----LYDPLGRRVAKR-------VWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQ 116 +Y YD G + +R + + ++ + + Sbjct: 547 EQYTWKNTYDAAGNLLTRRDPYNKGETYTYTKTGDLETVIAAGGSKVTLTSNANGQPLTI 606 Query: 117 NDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQM 176 D T Q L A G ++T + + +S +G + + V + Sbjct: 607 TDDNNKVTKLQYDKAGRLTVTTDANGNKSQTAYDAQG-RVFRSVDGEGNTTQYNYVEDLL 665 Query: 177 L---DRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKI------HLYHCD 227 E+L ++ ++ DP+ +Y D Sbjct: 666 RSIQYPTYKELLEYDNRNRVKQTTQQANSRNYIRKHGYDPLGNITNSTDAQDNETVYEYD 725 Query: 228 HRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRL 269 + EG YD NLL ++P + Sbjct: 726 VLSRVKKITDAEGGVT-EFSYDARDNLLQVKDPEGRLTIYTY 766 Score = 61.4 bits (147), Expect = 7e-08, Method: Composition-based stats. Identities = 30/231 (12%), Positives = 52/231 (22%), Gaps = 15/231 (6%) Query: 40 ERTHRYHYDSQHRLVHYTRTQYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRK 99 T Y YD+ L+ + +RY YD G+ K + T Sbjct: 444 GITTTYEYDTSGNLITLVEAKGTPDERTTRYTYDEFGQIKTKITGESVANNTELA----- 498 Query: 100 PQVTWYGWDGDRL-TTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQ 158 VT+Y +D + + I + + A L + Sbjct: 499 --VTYYEYDQYGNIIQVMDPEGNITHYSDHDALGNAQTIIDARAHLLPVVEQYTWKNTYD 556 Query: 159 SGGEDGGSVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPA 218 + G ++ + S+ L S + Sbjct: 557 AAGNLLTRRDPYNKGETYTYTKTGDLETVIAAGGSKVTLTSNANGQPLT------ITDDN 610 Query: 219 RKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRL 269 K+ D G G YD G + + Sbjct: 611 NKVTKLQYDKAGRLTVTTDANGNK-SQTAYDAQGRVFRSVDGEGNTTQYNY 660 Score = 60.2 bits (144), Expect = 2e-07, Method: Composition-based stats. Identities = 33/207 (15%), Positives = 57/207 (27%), Gaps = 41/207 (19%) Query: 8 ARDAHYLYRYDRHGRLTEKTDLIPEGV------------IRTDDERTHRYHYDSQHRLVH 55 A+D +Y YD R+ + TD ++ + R Y YD RL+ Sbjct: 715 AQDNETVYEYDVLSRVKKITDAEGGVTEFSYDARDNLLQVKDPEGRLTIYTYDKNDRLLT 774 Query: 56 YTRTQYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYG--------- 106 T+ + RY YD G + +E + +R + + Sbjct: 775 ETKDGDQNTDRQRRYAYDQNGNLIGSINPEQEMTTYEFDQANRLVKTQVFANKDHTHPIK 834 Query: 107 ------WDGDRLTTIQNDRTRI--------------QTIYQPGSFTPLIRVETATGELAK 146 D ++LT + Y + L V G K Sbjct: 835 VINYHFNDKNQLTNWSQQVSTSLPDGVTPTADVIPLSETYTYNNLEQLESVAVNFGSFTK 894 Query: 147 TQRRSLADTLQQSGGEDGGSVVFPPVL 173 T R S + + + + Sbjct: 895 TYRYSYYPNGLKKTYTNPEGITYTYFY 921 Score = 58.7 bits (140), Expect = 4e-07, Method: Composition-based stats. Identities = 37/222 (16%), Positives = 68/222 (30%), Gaps = 28/222 (12%) Query: 16 RYDRHGRLTEKTDLIPEGVIRTDDE---RTHRY-------HYDSQHRLVHYTRTQYAEPL 65 YD GR+ D E R+ +Y YD+++R+ T+ + Sbjct: 638 AYDAQGRVFRSVDGEGNTTQYNYVEDLLRSIQYPTYKELLEYDNRNRVKQTTQQANSRNY 697 Query: 66 VESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTI 125 + YDPLG S + T Y +D D T Sbjct: 698 IRKH-GYDPLGNIT--------------NSTDAQDNETVYEYDVLSRVKKITDAEGGVTE 742 Query: 126 YQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEIL 185 + + L++V+ G L L ++ D + D+ + I Sbjct: 743 FSYDARDNLLQVKDPEGRLTIYTYDKNDRLLTETKDGDQNT---DRQRRYAYDQNGNLIG 799 Query: 186 ADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCD 227 + +E + + + Q + +T K+ YH + Sbjct: 800 SINPEQEMTTYEFDQANRLVKTQVFANKDHTHPIKVINYHFN 841 Score = 54.0 bits (128), Expect = 1e-05, Method: Composition-based stats. Identities = 34/226 (15%), Positives = 60/226 (26%), Gaps = 36/226 (15%) Query: 7 IARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLV 66 I Y Y+ +G +T + T Y Y+ + RL+ R Sbjct: 1062 IDDANDTTYTYNANG----------HTKTQTKNSITTEYRYNHEERLIEVKRDDT----T 1107 Query: 67 ESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTI--QNDRTRIQT 124 + Y Y+P G+RV K V TWY ++G+ L + + Sbjct: 1108 IAEYAYNPHGQRVKKTVNGV---------------TTWYLYNGNGLAAEYSSTGQLIKEY 1152 Query: 125 IYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEI 184 + P + T + Q +D G++V+ + Sbjct: 1153 HFHPQKTWMTDPLFQRTAAGEVYYYHNDHLGTPQQMLDDAGNIVWEAQYSAFGKAHITID 1212 Query: 185 LADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRG 230 + ++ S D D G Sbjct: 1213 TVENNLRFPGQYFDSETGLHHNYFRDYDSALG-----RYIQSDPIG 1253 Score = 46.0 bits (107), Expect = 0.003, Method: Composition-based stats. Identities = 21/136 (15%), Positives = 38/136 (27%), Gaps = 2/136 (1%) Query: 118 DRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQML 177 D T Y+ + I V G + + S E G + + L Sbjct: 398 DTNGDVTTYENDQWKNEIGVTYPDGTSSSRKLHSQWSLPISETNEKGITTTYEYDTSGNL 457 Query: 178 DRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVS 237 L E + R+ ++ + Y D G + ++ Sbjct: 458 ITLVE--AKGTPDERTTRYTYDEFGQIKTKITGESVANNTELAVTYYEYDQYGNIIQVMD 515 Query: 238 TEGATEWCAEYDEWGN 253 EG +++D GN Sbjct: 516 PEGNITHYSDHDALGN 531 Score = 41.3 bits (95), Expect = 0.079, Method: Composition-based stats. Identities = 25/228 (10%), Positives = 56/228 (24%), Gaps = 41/228 (17%) Query: 4 DNRIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTH-------------------R 44 D D Y YD++G L + E D+ Sbjct: 778 DGDQNTDRQRRYAYDQNGNLIGSINPEQEMTTYEFDQANRLVKTQVFANKDHTHPIKVIN 837 Query: 45 YHYDSQHRLVHYT-----------RTQYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGW 93 YH++ +++L +++ + Y Y+ L E+ + Sbjct: 838 YHFNDKNQLTNWSQQVSTSLPDGVTPTADVIPLSETYTYNNL-----------EQLESVA 886 Query: 94 MSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLA 153 ++ + Y + + L + I Y L+ V S Sbjct: 887 VNFGSFTKTYRYSYYPNGLKKTYTNPEGITYTYFYNKNNQLMAVHIPGEGQISWTAFSWM 946 Query: 154 DTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSEESRRWLASCG 201 Q+ +R+ + +++ + Sbjct: 947 VPQTLLLPGGQKISFKYDDFQQLQERVLKKANNTELAKAVYEYDLEQN 994 >UniRef50_Q4ZXL5 YD repeat n=4 Tax=Pseudomonas syringae group RepID=Q4ZXL5_PSEU2 Length = 927 Score = 220 bits (560), Expect = 1e-55, Method: Composition-based stats. Identities = 63/418 (15%), Positives = 113/418 (27%), Gaps = 46/418 (11%) Query: 10 DAHYLYRYDRHGRLTEKTDLIPEGVIRTDDER--THRYHYDSQHRLVHYTRTQYAE---- 63 LY YD G + D + Y YD+ ++L+ T + A Sbjct: 301 LQDLLYDYDPVGNVIRIEDRAQSTAYNRNQRIDPVSAYGYDTLYQLIEATGRESAVVNHG 360 Query: 64 ---------------PLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQV------ 102 Y YD G + ++ + Sbjct: 361 PVFPGFQSPADPAQLANYTQTYRYDAGGNLQQLTHTGAQSHSRTLVTARYSNRSLPVIND 420 Query: 103 ---------TWYGWDGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLA 153 + +G+ L Q P++R + A + + + Sbjct: 421 HIPDEAEIAAAFDANGNLLALQAGQNLSWDRRNQLQQVRPVVR-DDAADDSERYIYDASG 479 Query: 154 DTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDP 213 L++ ++ + + A + A P Sbjct: 480 QRLRKVRTTQAKTITHTADVRYLPGLEIRTDTATGETLHVVVAQAGRNNVRVLHWASGKP 539 Query: 214 VYTPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLI---RLP 270 + DH G + +G Y +G + ++ R Sbjct: 540 DALENDQTRYTVNDHLGSGTLELDAQGQLISQESYYPFGGTSWWAGRNAIEANYKTVRYS 599 Query: 271 GQQYDEESGLYYNRHRYYDPLQGRYITQDPIGLKGGWNFYQYP-LNPVQYIDSMGLASKY 329 G++ D +GLYY RYY P R+I DP GL+ G N Y NP+ +ID+ G ++ Sbjct: 600 GKERDA-TGLYYYGMRYYAPWLQRWINPDPAGLEDGLNLYGMLRNNPLTFIDAAGEVAEI 658 Query: 330 GHLNN----GGYGARPNKPPTPDPSKLPDIAKQLRLPYPIDQASSAPNVFKTFFRALS 383 + G + + + + QL L +D R Sbjct: 659 PKHIHYIWLGAAEPLMKHLGGIENTSVLNPDYQLTLHLHLDLRKGDETEIVAALRGRR 716 >UniRef50_A9GT29 Insecticidal toxin complex-like protein n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=A9GT29_SORC5 Length = 2426 Score = 220 bits (560), Expect = 1e-55, Method: Composition-based stats. Identities = 73/453 (16%), Positives = 122/453 (26%), Gaps = 60/453 (13%) Query: 8 ARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDD--ERTHRYHYDSQHRLVHYTRTQYAEP- 64 A + Y YD G + E D + V + +Y YD+ +RL+ T ++A Sbjct: 1779 AVLQNLTYTYDPVGNIVEINDSAQQTVFFNNAVVSPNAQYVYDAVYRLIEATGREHAGGL 1838 Query: 65 -------------------------LVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRK 99 +Y YD +G S Sbjct: 1839 ADVQRDQNDLPIQALPHANDTQALRNYTEQYFYDAVGNIQRMEHLAGAGTWIRRYSYEMT 1898 Query: 100 PQV----------------TWYGWDGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGE 143 + G+ L + G Sbjct: 1899 SNRLKSTFGDPEDEPSSPMYPHDAHGNMTAMPHIAALTW------DENDQLRSTDLDGGG 1952 Query: 144 LAKTQRRSLADTLQQSGGEDG--GSVVFPPVLVQMLDRLESEILADRVSEESRRWLASCG 201 + + +++ G ++ R + ++ +R + A Sbjct: 1953 VVYYAYDATGQRVRKVWEHSGLVEERIYLGGYEVYRKRNATGLVLERQTLHVMD-GARRA 2011 Query: 202 LTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLL---NEE 258 VE +T ++ +H G V G EY +G Sbjct: 2012 AMVETKTVDTSGPFTVTPRVRYQLDNHLGSASLEVDGAGLVIGYEEYHPFGTTAYWSAAS 2071 Query: 259 NPHQLQQLIRLPGQQYDEESGLYYNRHRYYDPLQGRYITQDPIGLKGGWNFYQYPLN-PV 317 Q+ R G++ DEE+GLYY+ RYY P GR+ DP G+ G N Y Y P+ Sbjct: 2072 GIEVSQRRYRYTGKEKDEETGLYYHGARYYAPWLGRWTAADPAGMVDGPNLYMYVSGRPI 2131 Query: 318 QYIDSMGLASKYGHLNNGGYGARPNKP---PTPDPSKLPDIAKQLRLPYPIDQASSAPNV 374 D G K G N + +P P+ L + ++ + P Sbjct: 2132 TLTDPSGAQGKSGDDNQQQHSHDTRPKQPRRSPPPASLKEAIEKFEDVKISEPKDLTPEE 2191 Query: 375 FKTFFRALSPYDYTLYCRKWVKPNLTCTPQDDS 407 + F Y W + Sbjct: 2192 RELIFGKPDINQAEGYSTPWEAARAALQKYNPE 2224 Score = 61.0 bits (146), Expect = 9e-08, Method: Composition-based stats. Identities = 31/239 (12%), Positives = 59/239 (24%), Gaps = 22/239 (9%) Query: 16 RYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQH----RLVHYTRTQYAEPLVESRYL 71 YD G+ + + Y YD RL TR+ L Y Sbjct: 1738 DYDAKGQRERI---------VYGNGTSTVYTYDPLTFKLARL-RTTRSSDGAVLQNLTYT 1787 Query: 72 YDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQPGSF 131 YDP+G V ++ +S Q Y + + Q Sbjct: 1788 YDPVGNIVEINDSAQQTVFFNNAVVSPNAQ-YVYDAVYRLIEATGREHAGGLADVQRDQN 1846 Query: 132 TPLIRVETATGE-------LAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEI 184 I+ + + ++ + + G+ + +RL+S Sbjct: 1847 DLPIQALPHANDTQALRNYTEQYFYDAVGNIQRMEHLAGAGTWIRRYSYEMTSNRLKSTF 1906 Query: 185 LADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATE 243 S + + M + + ++ D G+ G Sbjct: 1907 GDPEDEPSSPMYPHDAHGNMTAMPHIAALTWDENDQLRSTDLDGGGVVYYAYDATGQRV 1965 Score = 48.7 bits (114), Expect = 4e-04, Method: Composition-based stats. Identities = 32/265 (12%), Positives = 56/265 (21%), Gaps = 32/265 (12%) Query: 8 ARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQH------RLVHYTRTQY 61 R + Y YD R T + R Y H L Y Sbjct: 1568 GRRQNRRYTYDALQRPTRTWLFVDGEAERLVKRVV----YGEAHPEAQQRNLRAQAYQVY 1623 Query: 62 AEPLVESRYLYDPLGRRVAKRVWRRERDLTG--WMSLSRKPQVTWYGWDGDRLTTIQNDR 119 V + YD G + R G W LS V+ + Sbjct: 1624 DGAGVVTSQAYDFKGNLLQASRHLRSEVHAGADWSVLSALTDVSA----IAAAAAPLLEA 1679 Query: 120 TRIQTIYQPGSFTPLIRVETATGELA----KTQRRSLADTLQQSGGEDGGSVVFPPVLVQ 175 +T + + R+ + + L + + + F + Sbjct: 1680 ESFETQTEYDALNRPTRLIAPDPDASEIKPTYNEAGLVERIDVLIRDAAAWTTFVDNIDY 1739 Query: 176 MLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLAL 235 I+ + + + + Y D G + + Sbjct: 1740 DAKGQRERIVYGNGTSTVYTYDPLTFKLARLRTTRSSDGAVLQNLTYTY--DPVGNIVEI 1797 Query: 236 VSTEGATE----------WCAEYDE 250 + T YD Sbjct: 1798 NDSAQQTVFFNNAVVSPNAQYVYDA 1822 >UniRef50_D1T3Q3 YD repeat protein (Fragment) n=2 Tax=Acidovorax avenae subsp. avenae ATCC 19860 RepID=D1T3Q3_9BURK Length = 561 Score = 220 bits (559), Expect = 1e-55, Method: Composition-based stats. Identities = 116/379 (30%), Positives = 158/379 (41%), Gaps = 59/379 (15%) Query: 2 WPDNRIA-----RDAH----------------YLYRYDRHGRLTEKTDLIPEGVIRTDDE 40 WP NRI DA YRYD G + D Sbjct: 49 WPGNRIGWNTPEPDADGAGSDGNDGSAGKGILIRYRYDAFGNRVQALHT---------DG 99 Query: 41 RTHRYHYDSQHRLVHYTRTQYAEPLVE--SRYLYDPLGRRVAKRVWRRERDLTGWMSLSR 98 R R YD+ HRL + + E + + Y YDP GRR+AK V+ D + + Sbjct: 100 RAQRLRYDALHRLREVWQREAGEAGWQRVACYRYDPFGRRLAKTVFGHGND---NSNAAA 156 Query: 99 KPQVTWY-GWDGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQ 157 +P T Y GWDGDRL + + +Y+PGSF PL+R+E Q + + + Sbjct: 157 EPSTTTYAGWDGDRLVHTEGPQGLQHVLYEPGSFAPLLRLEREQAIPTAMQALLVMEEDR 216 Query: 158 QSGGEDGGSVVFPP----------VLVQMLDRLESEILADRVSEESRRWLASCGLTVEQM 207 S +DG P ++L+R + + R A + Sbjct: 217 GSVADDGPDGGESPAAVLFAGLPRTQRELLERALQDATGPQGDALLARLQAGLPDEAGAL 276 Query: 208 QNQM---------DPVYTPARKIHLYHCDHRGLPLALVSTEG----ATEWCAEYDEWGNL 254 A +I + CDH G P+ALV G W A + WG + Sbjct: 277 LAAGVQSVRQQQQAATQAHATRIRHFLCDHLGTPIALVDANGPQAGLVTWAATHHAWGAV 336 Query: 255 LNEENPHQLQQLIRLPGQQYDEESGLYYNRHRYYDPLQGRYITQDPIGLKGGWNFYQYPL 314 E +P + Q IR GQQ D E+GL+YNRHRYYDP+ G+Y+TQDPIGL GG + YPL Sbjct: 337 REEYDPLGIGQPIRFQGQQLDAETGLHYNRHRYYDPMLGQYVTQDPIGLMGGIHKQAYPL 396 Query: 315 NPVQYIDSMGLASKYGHLN 333 NP+Q D +GL Sbjct: 397 NPIQASDPLGLFEFPSVTT 415 >UniRef50_Q4K3M9 Rhs family protein n=5 Tax=Pseudomonas RepID=Q4K3M9_PSEF5 Length = 1486 Score = 219 bits (557), Expect = 2e-55, Method: Composition-based stats. Identities = 84/359 (23%), Positives = 125/359 (34%), Gaps = 32/359 (8%) Query: 6 RIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPL 65 R YDR GRL + YD LV +A Sbjct: 1015 RTQGQISTRSEYDRCGRLRARLQHSSLLANTLPTAPERHLEYDDSDNLVGLAER-HATGQ 1073 Query: 66 VESRYLYDPLGRRVAKRVWRRERDLTGWMSLSR-------------------KPQVTWYG 106 + YD GR +A + + + T + Q Y Sbjct: 1074 HRQLFHYDATGRIIASQDGLQGQKETFAYDAAANLLDGPKAGAGLVVHNKLLTYQDKRYR 1133 Query: 107 WDGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAK---TQRRSLADTLQQSGGED 163 +D + R + + LI V T + L + +S + Sbjct: 1134 YDAFGRMIEKRSGRRGVQRFAYDAEHRLIEVRNQTSSGETLVRMRYDVLGRRISKSEYDS 1193 Query: 164 GGSVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHL 223 G+++ V RL E ++++ ++ + +KI Sbjct: 1194 QGNLLGETRFVWDGLRLLQEQR----NQQTSLYVYEDLGHAPLARVDG---LGAQQKIRY 1246 Query: 224 YHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQL--QQLIRLPGQQYDEESGLY 281 YH D GLP L +G + W A Y WGN + E +Q +R GQ D E+GL+ Sbjct: 1247 YHNDLNGLPQQLCEPDGHSVWQARYQVWGNTVEEIREPYYIEEQNLRFQGQYLDRETGLH 1306 Query: 282 YNRHRYYDPLQGRYITQDPIGLKGGWNFYQYPLNPVQYIDSMGLASKYGHLNNGGYGAR 340 +N R+YDP GR+ T DPIGL GG N YQY NP+ +ID +G K + G Sbjct: 1307 FNTFRFYDPDIGRFTTPDPIGLAGGLNLYQYAPNPIGWIDPLGWICKSAYSGRRGTTKA 1365 Score = 82.5 bits (202), Expect = 3e-14, Method: Composition-based stats. Identities = 54/366 (14%), Positives = 98/366 (26%), Gaps = 90/366 (24%) Query: 3 PDNRIARDAHY-----LYRYDRHGRLTEK---------------------------TDLI 30 NR++ Y YD + E D + Sbjct: 843 AGNRLSEQQDLDGSAKRYGYDLLNNVVELQSHPAPYGTGLSAVPAQPIAPIIHRFERDAV 902 Query: 31 PEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYLYDPLGRRVAKRVWRRERDL 90 + + D+ +Y YD ++L + T + YD LG+ + + Sbjct: 903 GRLLAKITDDGRSQYTYDPLNQLTAASFTDNLGNQQALSFSYDALGQLLEEHTVAGSL-- 960 Query: 91 TGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRR 150 + Y G+ LT Q R GS L ++ ++ QR Sbjct: 961 -----------IHRYDELGN-LTQTQLPDKRWLNRLYYGS-GHLHQINLDGQVVSDFQRD 1007 Query: 151 SLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQ 210 L + ++ G+ + S +LA+ + R L Sbjct: 1008 RLHREVLRTQGQISTRSEYDRCGRLRARLQHSSLLANTLPTAPERHLEYDDSD---NLVG 1064 Query: 211 MDPVYTPARKIHLYHCDHRGLPLA------------LVSTEGATEW-------------- 244 + + + L+H D G +A Sbjct: 1065 LAERHATGQHRQLFHYDATGRIIASQDGLQGQKETFAYDAAANLLDGPKAGAGLVVHNKL 1124 Query: 245 ------CAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEE------SGLYYNRHRYYDPLQ 292 YD +G ++ + + + Q + E SG R R YD + Sbjct: 1125 LTYQDKRYRYDAFGRMIEKRSGRRGVQRFAYDAEHRLIEVRNQTSSGETLVRMR-YD-VL 1182 Query: 293 GRYITQ 298 GR I++ Sbjct: 1183 GRRISK 1188 Score = 80.6 bits (197), Expect = 1e-13, Method: Composition-based stats. Identities = 52/313 (16%), Positives = 88/313 (28%), Gaps = 36/313 (11%) Query: 7 IARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDD------------ERTHRYHYDSQHRLV 54 Y Y YD +T+ TD + R + +T + ++ + +L+ Sbjct: 557 TDEGDSYQYDYDLEAGITQVTDSLQRLSRRRWNSQLQIVEYTDNLNQTWAFEWNDERQLL 616 Query: 55 HYTRTQYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQV--------TWYG 106 T Y YD G +A+ T W+ PQ Sbjct: 617 SATDPLGG----RYAYSYDETGNLIAETDPLGHSHSTLWLEHWSLPQTLTDPAGESWHLR 672 Query: 107 WDGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGS 166 +D + D T Y+ + ++ + A G K + S L + G Sbjct: 673 YDPRGNCIAEVDPLGQVTQYRHDAHGQVVEIIDAAGRSRKMRWNSSGQLL-EHLDCSGYP 731 Query: 167 VVFPPVLVQ--------MLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPA 218 F + + S+ Q+ P+ Sbjct: 732 TRFEYDRRGNVKAIIDALGEHTRFHYDCQGRLLSSQLADGRAEHFQRSSNGQLQGYTDPS 791 Query: 219 RKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRL-PGQQYDEE 277 LY + RG + G +YD +G LL N + G + E+ Sbjct: 792 GYTTLYQYNRRGQIRQRIDAHGRQV-RFDYDAYGRLLALTNENGESYRFAWDAGNRLSEQ 850 Query: 278 SGLYYNRHRY-YD 289 L + RY YD Sbjct: 851 QDLDGSAKRYGYD 863 Score = 77.2 bits (188), Expect = 1e-12, Method: Composition-based stats. Identities = 56/397 (14%), Positives = 106/397 (26%), Gaps = 61/397 (15%) Query: 1 MWPDN-----RIARDAHY----LYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQH 51 +WP R+ D Y YD G L + D + + R+ YD+ H Sbjct: 474 LWPGRIAQVERLYPDQQREVLVSYDYDAAGDLAQVRDS--------EGQVQRRFAYDAGH 525 Query: 52 RLVHYTRTQYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVT-------W 104 R++ + + D R + + + QVT Sbjct: 526 RMIEHQLATGLRCFYQWTQFADQQWRVTRHWTDEGDSYQYDYDLEAGITQVTDSLQRLSR 585 Query: 105 YGWDGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDG 164 W+ D ++ L+ G + + ++ Sbjct: 586 RRWNSQLQIVEYTDNLNQTWAFEWNDERQLLSATDPLGGRYAYSYDETGNLIAETD---- 641 Query: 165 GSVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLY 224 + + + + L D E G + ++ P ++ Y Sbjct: 642 -PLGHSHSTLWLEHWSLPQTLTDPAGESWHLRYDPRGNCIAEVD--------PLGQVTQY 692 Query: 225 HCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEESGLY--- 281 D G + ++ G + ++ G LL + +YD G Sbjct: 693 RHDAHGQVVEIIDAAGRSR-KMRWNSSGQLLEHLDCSGYPTRF-----EYDRR-GNVKAI 745 Query: 282 ------YNRHRYYDPLQGRYITQDPIGLKGG-WNFYQYPLNP--VQYIDSMGLASKYGHL 332 + R +YD GR ++ L G +Q N Y D G + Y + Sbjct: 746 IDALGEHTRF-HYDCQ-GRLLSS---QLADGRAEHFQRSSNGQLQGYTDPSGYTTLYQYN 800 Query: 333 NNGGYGARPNKPPTPDPSKLPDIAKQLRLPYPIDQAS 369 G R + + L L ++ Sbjct: 801 RRGQIRQRIDAHGRQVRFDYDAYGRLLALTNENGESY 837 Score = 75.2 bits (183), Expect = 5e-12, Method: Composition-based stats. Identities = 41/277 (14%), Positives = 77/277 (27%), Gaps = 29/277 (10%) Query: 10 DAHYLYRYDRHGRLTEKTDLIPEGVIRTDD------------ERTHRYHYDSQHRLVHYT 57 YR+D HG++ E D + R+ YD + + Sbjct: 687 GQVTQYRHDAHGQVVEIIDAAGRSRKMRWNSSGQLLEHLDCSGYPTRFEYDRRGNVKAII 746 Query: 58 RTQYAEPLVESRYLYDPLGRRVAKR-------VWRRERDLTGWMSLSRKPQVTWYGWDGD 110 +R+ YD GR ++ + ++R + T Y ++ Sbjct: 747 DALG----EHTRFHYDCQGRLLSSQLADGRAEHFQRSSNGQLQGYTDPSGYTTLYQYNRR 802 Query: 111 RLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFP 170 + D Q + ++ L+ + GE + + + L + DG + + Sbjct: 803 GQIRQRIDAHGRQVRFDYDAYGRLLALTNENGESYRFAWDA-GNRLSEQQDLDGSAKRYG 861 Query: 171 PVLVQMLDRLESEILADRVS--EESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDH 228 L+ + L+S + +A E+ Y D Sbjct: 862 YDLLNNVVELQSHPAPYGTGLSAVPAQPIAPIIHRFERDAVGRLLAKITDDGRSQYTYDP 921 Query: 229 RGLPLAL--VSTEGATEW-CAEYDEWGNLLNEENPHQ 262 A G + YD G LL E Sbjct: 922 LNQLTAASFTDNLGNQQALSFSYDALGQLLEEHTVAG 958 Score = 71.8 bits (174), Expect = 5e-11, Method: Composition-based stats. Identities = 57/466 (12%), Positives = 117/466 (25%), Gaps = 79/466 (16%) Query: 8 ARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTH--------------------RYHY 47 D YD GRL D + + Y Y Sbjct: 440 RNDNRLHLEYDSSGRLWLLRDTFEQAQLELSYSTLWPGRIAQVERLYPDQQREVLVSYDY 499 Query: 48 DSQHRLVHYTRTQYAEPLVESRYLYDPLGRRVAKRVWRR-----------ERDLTGWMSL 96 D+ L ++ V+ R+ YD R + ++ ++ Sbjct: 500 DAAGDLAQVRDSEG---QVQRRFAYDAGHRMIEHQLATGLRCFYQWTQFADQQWRVTRHW 556 Query: 97 SRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTL 156 + + Y +D + T D + + + S ++ + + L Sbjct: 557 TDEGDSYQYDYDLEAGITQVTDSLQRLSRRRWNSQLQIVEYTDNLNQTWAFEWNDE-RQL 615 Query: 157 QQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYT 216 + GG + L + + W LT Sbjct: 616 LSATDPLGGRYAYSYDETGNLIAETDPLGHSHSTLWLEHWSLPQTLT------------D 663 Query: 217 PARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRL--PGQ-- 272 PA + D RG +A V G +D G ++ + + +R GQ Sbjct: 664 PAGESWHLRYDPRGNCIAEVDPLGQVT-QYRHDAHGQVVEIIDAAGRSRKMRWNSSGQLL 722 Query: 273 QYDEESGLYYNRHRY-YDPLQGRYITQDPIGLKGGWNFYQYPLNPVQYIDSMGLASKYGH 331 ++ + SG R+ YD N ID++G +++ + Sbjct: 723 EHLDCSG---YPTRFEYDRR----------------------GNVKAIIDALGEHTRFHY 757 Query: 332 LNNGGYGARPNKPPTPDPSKLPDIAKQLRLPYPIDQASSAPNVFKTFFRA-LSPYDYTLY 390 G + + + + P + + R + + + Sbjct: 758 DCQGRLLSSQLADGRAEHFQRSSNGQLQGYTDPSGYTTLYQYNRRGQIRQRIDAHGRQVR 817 Query: 391 CRKWVKPNLTCTPQDDSQYPGMDTKTASDYLPQTNWPTTQLPPGYT 436 L ++ + + Q + + GY Sbjct: 818 FDYDAYGRLLALTNENGESYRFAWDAGNRLSEQQDLDGSAKRYGYD 863 Score = 42.9 bits (99), Expect = 0.029, Method: Composition-based stats. Identities = 33/266 (12%), Positives = 53/266 (19%), Gaps = 68/266 (25%) Query: 61 YAEPLVESRYLYDPLGRRVAKRVWRRERD---LTGWMSLSRKPQVTWYGWDGDRLTTIQN 117 YD GR R + + R QV D R + Sbjct: 438 GDRNDNRLHLEYDSSGRLWLLRDTFEQAQLELSYSTLWPGRIAQVERLYPDQQREVLVS- 496 Query: 118 DRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQML 177 Y + L +V + G++ + + + G + Sbjct: 497 --------YDYDAAGDLAQVRDSEGQVQRRFAYDAGHRMIEHQLATGLRCFYQWTQFADQ 548 Query: 178 DRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKI---------------- 221 + D + G+T Q ++ Sbjct: 549 QWRVTRHWTDEGDSYQYDYDLEAGITQVTDSLQRLSRRRWNSQLQIVEYTDNLNQTWAFE 608 Query: 222 -----------------HLYHCDHRGL----------------------PLALVSTEGAT 242 + Y D G P L G Sbjct: 609 WNDERQLLSATDPLGGRYAYSYDETGNLIAETDPLGHSHSTLWLEHWSLPQTLTDPAGE- 667 Query: 243 EWCAEYDEWGNLLNEENPHQLQQLIR 268 W YD GN + E +P R Sbjct: 668 SWHLRYDPRGNCIAEVDPLGQVTQYR 693 >UniRef50_B5JS46 NHL repeat containing protein n=2 Tax=gamma proteobacterium HTCC5015 RepID=B5JS46_9GAMM Length = 2515 Score = 218 bits (556), Expect = 3e-55, Method: Composition-based stats. Identities = 87/388 (22%), Positives = 129/388 (33%), Gaps = 39/388 (10%) Query: 14 LYRYDRHGRLTEKTDLIPEGVIRTDDE-------RTHRYHYDSQHRLVHYTRTQYAEPLV 66 Y D+ GR+T+KT+ +P E T Y YD+ RL TR Sbjct: 2114 SYIRDKLGRITQKTEKLPSPTSGEAGEEPGERVETTTVYGYDTAGRLQTVTR-----NGA 2168 Query: 67 ESRYLYDPLGRRVAKRVWRRERDLTGWMS---LSRKPQVTWYGWDGDRLTTIQNDRTRIQ 123 Y YD G R++K Y +GD + T Sbjct: 2169 TITYSYDANGNRLSKADPSGTVTGQYDEQDRLTQYGNNSYEYNANGDLMAKNTQAGTI-- 2226 Query: 124 TIYQPGSFTPLIRVE--TATGELAKTQRRSLADTLQQSGGEDGGSVVFPPV--LVQMLDR 179 Y F LI + A+ + D L +V D+ Sbjct: 2227 -EYDYDVFGNLISATIPSPLAGEAQGEGAVEIDYLIDGQNRRVAKLVNGTQVQGFLYKDQ 2285 Query: 180 LESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVS-T 238 L D R++ + + + + DH G P +V+ Sbjct: 2286 LNPIAELDGSGNVVSRFVYADKANIPSY-------MIKGGQTYRIISDHLGSPRMVVNTA 2338 Query: 239 EGATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEESGLYYNRHRYYDPLQGRYITQ 298 +GA YDE+G ++ + NP Q G YD+ + L R YD GR+ T+ Sbjct: 2339 DGAIAQQMSYDEFGQVVEDSNPGF--QPFGFAGGIYDQHTKLTRFGARDYDAETGRWTTK 2396 Query: 299 DPIGLKGGWNFYQYP-LNPVQYIDSMGLASKYGHL------NNGGYGARPNKPPTPDPSK 351 DPI +GG N + Y +PV ++D GL + + AR N P P P Sbjct: 2397 DPIRFEGGLNLFGYVANDPVNWVDIWGLEGEQATVELVNPRGADWSEARENNPHLPGPQY 2456 Query: 352 LPDIAKQLRLPYPIDQASSAPNVFKTFF 379 D A + D + PN K + Sbjct: 2457 PGDYATEYTDKAERDVCVTCPNGEKYYT 2484 Score = 67.1 bits (162), Expect = 1e-09, Method: Composition-based stats. Identities = 26/247 (10%), Positives = 64/247 (25%), Gaps = 32/247 (12%) Query: 6 RIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPL 65 ++A Y+YD GRL + G D ++ Y++ ++ ++ Sbjct: 1819 QVAGFHTLHYQYDNKGRLAAMSSKNAAGTALRDA----QFTYNTLGKVSLFSDAL----Q 1870 Query: 66 VESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTI 125 E+ Y YD GR + + L Y +D + T + + Sbjct: 1871 RETHYEYDVAGRVTRMTLPGQREVL--------------YDYDANGNLTRLTPPGKTAHV 1916 Query: 126 YQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEIL 185 + + + + + + + Sbjct: 1917 FHYNGVDQETGYIPPSPSTGEGDTYATHYQYNLDQQLTQMTRPDGQQVQLQYGATTGNLD 1976 Query: 186 ADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIH--LYHCDHRGL-PLALVSTEGAT 242 + + + + + Q+ + P + ++ P+ G+ Sbjct: 1977 SVQTPRGTYSYTYDPN--IGQLSSVTSPDSVTVQTVYDGFLVTAQHWSGPI-----SGSV 2029 Query: 243 EWCAEYD 249 W D Sbjct: 2030 SWQYNND 2036 Score = 61.4 bits (147), Expect = 8e-08, Method: Composition-based stats. Identities = 55/344 (15%), Positives = 82/344 (23%), Gaps = 93/344 (27%) Query: 7 IARDAHYLYRYDRHGRLTEKT-------------------DLIPEGVIRTDDERTHRYHY 47 + LY YD +G LT T + P D Y Y Sbjct: 1888 LPGQREVLYDYDANGNLTRLTPPGKTAHVFHYNGVDQETGYIPPSPSTGEGDTYATHYQY 1947 Query: 48 DSQHRLVHYTRTQYA-----------------EPLVESRYLYDPL-GRRVAKRV------ 83 + +L TR P Y YDP G+ + Sbjct: 1948 NLDQQLTQMTRPDGQQVQLQYGATTGNLDSVQTPRGTYSYTYDPNIGQLSSVTSPDSVTV 2007 Query: 84 -----------------------WRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRT 120 W+ D S Q YG+D D L T D + Sbjct: 2008 QTVYDGFLVTAQHWSGPISGSVSWQYNNDFLPTQSQVNSGQTITYGYDNDNLLTQAGDLS 2067 Query: 121 RIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRL 180 ++ + LI T Q + G ++ ++ Sbjct: 2068 INRS-----ATNGLITGTTLADITTSRQYNGFGEIDAVGASHAGEGELYQASYIRDKLGR 2122 Query: 181 ESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEG 240 ++ L + +Y D G + G Sbjct: 2123 ITQKTEK--------------LPSPTSGEAGEEPGERVETTTVYGYDTAGRLQTVT-RNG 2167 Query: 241 ATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEESGLYYNR 284 AT YD GN L++ +P GQ DE+ L Sbjct: 2168 ATI-TYSYDANGNRLSKADPSGTV-----TGQY-DEQDRLTQYG 2204 Score = 54.0 bits (128), Expect = 1e-05, Method: Composition-based stats. Identities = 41/271 (15%), Positives = 71/271 (26%), Gaps = 43/271 (15%) Query: 21 GRLTEKTDLIP---EGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYLYDPLGR 77 GRL + + + V E + + YD+ +RL T D G Sbjct: 1523 GRLLYQFSKMGFHLQTVDAVTGETLYEFQYDADNRLTQIT---------------DVDGN 1567 Query: 78 RVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQPGSFTPLIRV 137 + + + + Q D + + + + + L Sbjct: 1568 ITVIERNGSGQPMA---IVGPEGQRVELALDQNGYLSSIKESSNHEWQVSYTQGGLLTAF 1624 Query: 138 ETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSEESRRWL 197 + + ++ L+ + E+GG L + D + A S E R + Sbjct: 1625 TYPNNNQSFYEYDAMGRLLRTTNEEEGG-----WQLSRQYDASQKGYEASIESREGRVRV 1679 Query: 198 ASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWCAEY-DE-WGNLL 255 + G +KI G L T G D +G Sbjct: 1680 YTVGEESGSSTLYRTTYPNLTQKIRRV----IGSTTELTQTNGMVVTSQTAPDPRFGRSA 1735 Query: 256 NEENPHQLQQLIRLPGQQYDEESGLYYNRHR 286 L+ SGL YN R Sbjct: 1736 KYTASRVLETP-----------SGLIYNEQR 1755 Score = 52.1 bits (123), Expect = 4e-05, Method: Composition-based stats. Identities = 28/249 (11%), Positives = 62/249 (24%), Gaps = 31/249 (12%) Query: 20 HGRLTEK--TDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYLYDPLGR 77 +GR ++ T + + R D R V+ Y YD GR Sbjct: 1780 NGRTSQALFTRADNNWRFESPEGRVRNTQVDGAGRPVNVQ----VAGFHTLHYQYDNKGR 1835 Query: 78 RVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQPGSFTPLIRV 137 A + + ++ ++ +D + +T Y+ + R+ Sbjct: 1836 LAAMSSKNAAGTAL---------RDAQFTYNTLGKVSLFSDALQRETHYEYDVAGRVTRM 1886 Query: 138 ETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSEESRRWL 197 + + + + V + Q + + + Sbjct: 1887 TLPGQREVLYDYDANGNLTRLTPPGKTAHVFHYNGVDQETGYIPPSPSTGEGDTYATHYQ 1946 Query: 198 ASCGLTVEQMQNQMDPV--------------YTPARKIHLYHCDH-RGLPLALVSTEGAT 242 + + QM R + Y D G ++ S + + Sbjct: 1947 YNLDQQLTQMTRPDGQQVQLQYGATTGNLDSVQTPRGTYSYTYDPNIGQLSSVTSPD-SV 2005 Query: 243 EWCAEYDEW 251 YD + Sbjct: 2006 TVQTVYDGF 2014 Score = 47.9 bits (112), Expect = 9e-04, Method: Composition-based stats. Identities = 51/314 (16%), Positives = 89/314 (28%), Gaps = 48/314 (15%) Query: 2 WPDNRIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDS-----QHRLVHY 56 +P+N + Y YD GRL T+ G + + Y++ + R+ Y Sbjct: 1626 YPNNN----QSF-YEYDAMGRLLRTTNEEEGGWQLSRQYDASQKGYEASIESREGRVRVY 1680 Query: 57 TRTQYAEPLVESRYLYDPLGRRVAK--RVWRRERDLTGWMSLSRKPQVT---WYG----W 107 T + + R Y K RV +LT + Q +G + Sbjct: 1681 TVGEESGSSTLYRTTY---PNLTQKIRRVIGSTTELTQTNGMVVTSQTAPDPRFGRSAKY 1737 Query: 108 DGDRLTTIQND---------RTRIQTIYQPGSFTPLIRVETATGELAK---------TQR 149 R+ + + S T L T G ++ + Sbjct: 1738 TASRVLETPSGLIYNEQRNKSATLADDNDLLSHTKLTETRTVNGRTSQALFTRADNNWRF 1797 Query: 150 RSLADTLQQSGGEDGGSVVF----PPVLVQMLDRLESEILADRVSEESRRWLASCGLTVE 205 S ++ + + G V + + + A + L T Sbjct: 1798 ESPEGRVRNTQVDGAGRPVNVQVAGFHTLHYQYDNKGRLAAMSSKNAAGTALRDAQFTYN 1857 Query: 206 QMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQ 265 + R+ H D G + G E +YD GNL P + Sbjct: 1858 TLGKVSLFSDALQRETHY-EYDVAGRVTRMTLP-GQREVLYDYDANGNLTRLTPPGKTAH 1915 Query: 266 LIRLPGQQYDEESG 279 + G D+E+G Sbjct: 1916 VFHYNG--VDQETG 1927 Score = 46.3 bits (108), Expect = 0.003, Method: Composition-based stats. Identities = 36/217 (16%), Positives = 59/217 (27%), Gaps = 28/217 (12%) Query: 5 NRIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQY--- 61 +R+ + + Y Y+ +G L K Y YD L+ T Sbjct: 2198 DRLTQYGNNSYEYNANGDLMAKNTQAGTIE----------YDYDVFGNLISATIPSPLAG 2247 Query: 62 ---AEPLVESRYLYDPLGRRVAKRVWRRERDLTGW----------MSLSRKPQVTWYGWD 108 E VE YL D RRVAK V + + Y Sbjct: 2248 EAQGEGAVEIDYLIDGQNRRVAKLVNGTQVQGFLYKDQLNPIAELDGSGNVVSRFVYADK 2307 Query: 109 GDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVV 168 + + + + I ++ V TA G +A+ + + Sbjct: 2308 ANIPSYMIKGGQTYRIISDHLGSPRMV-VNTADGAIAQQMSYDEFGQVVEDSNPGFQPFG 2366 Query: 169 FPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVE 205 F + + A E+ RW + E Sbjct: 2367 FAG-GIYDQHTKLTRFGARDYDAETGRWTTKDPIRFE 2402 >UniRef50_C7MXD3 Rhs family protein n=1 Tax=Saccharomonospora viridis DSM 43017 RepID=C7MXD3_SACVD Length = 1485 Score = 218 bits (555), Expect = 3e-55, Method: Composition-based stats. Identities = 84/361 (23%), Positives = 131/361 (36%), Gaps = 42/361 (11%) Query: 6 RIARDAHYLYRYDRHGRLT----EKTDLIPEGVIRTDDERTHRYHY-------------- 47 R+ A ++DR+GRL D P R + Y Y Sbjct: 1020 RLDNGATIAQQWDRNGRLIDQSISIADGTPTVPPRYRLLQQRSYRYGPDGSPQAVDDTST 1079 Query: 48 -------DSQHRLVHYTRTQYAEPLVESRYLYDPLGRR------VAKRVWRRERDLTGWM 94 D R+ Q A P + +Y YD G + G Sbjct: 1080 GTVRLQLDGTGRV-----RQVAGPGGQEQYSYDRAGNIRNASWHTPSGHGQHSYAYDGTR 1134 Query: 95 SLSRKPQVTWYGWDGDRLTTIQ--NDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSL 152 + Y G +T ++ T ++ Y + L+ V T G + +L Sbjct: 1135 LTTAGNVRYTYDRQGRVVTKVRYEAGGTTLRWHYTWNAEDRLVEVGTPDGSRWRYLYDAL 1194 Query: 153 ADTLQQSG-GEDGGSVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQM 211 + + DG +VV + RL ++LA V + W + Q++ ++ Sbjct: 1195 GRRIAKHKLAPDGSTVVERTEFIWDGVRLAEQVLA-GVDATTWEWHPRRFRPLTQIRRRL 1253 Query: 212 DPVYT-PARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRLP 270 P H D G L+ G W WG + + + R P Sbjct: 1254 SPAKQWVGGDFHAVITDGIGTSTELLDGSGNLAWRNRTTLWGKTVIKHHGSA-STPWRFP 1312 Query: 271 GQQYDEESGLYYNRHRYYDPLQGRYITQDPIGLKGGWNFYQYPLNPVQYIDSMGLASKYG 330 GQ D E+GL+YN HRYYDP GRY++ DP+GL+ N Y Y +NP++++D +GL S Sbjct: 1313 GQYSDPETGLHYNYHRYYDPDTGRYVSCDPLGLRPSPNHYAYVVNPLRWLDPLGLMSCGD 1372 Query: 331 H 331 Sbjct: 1373 D 1373 Score = 88.3 bits (217), Expect = 6e-16, Method: Composition-based stats. Identities = 52/273 (19%), Positives = 71/273 (26%), Gaps = 29/273 (10%) Query: 13 YLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYLY 72 YRYD G L E + R+ R+ YD Q RLV +T Y Y Sbjct: 526 VRYRYDDAGLLAEVVNS---------SGRSLRFSYDDQSRLVRWTDRNGH----WYHYFY 572 Query: 73 DPLGRRVAKRVWRRERDLTGWMSLSRK--------PQVTWYGWDGDRLTTIQNDRTRIQT 124 D GR VA + T + T Y D + D T Sbjct: 573 DDAGRCVANHSSSKYLSGTFSYDPDNRITRFTDALGHSTVYQLDAKGNVIAETDPLGHTT 632 Query: 125 IYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFP-----PVLVQMLDR 179 + LI G + + SG + S P V D Sbjct: 633 TSEWDEHNRLISRTDPLGRTTRYSYDDDGNLTGVSGPDGTQSRAEYNEWGLPTSVVDPDG 692 Query: 180 LESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPA--RKIHLYHCDHRGLPLALVS 237 D + T + + + D GLPLA+ Sbjct: 693 AVWRQSYDERGNRVSLTDPTGATTRYSYDERGNATAITDALGQTRRIEYDPAGLPLAVTD 752 Query: 238 TEGATEWCAEYDEWGNLLNEENPHQLQQLIRLP 270 GAT E D +G + + Sbjct: 753 PSGATR-RFERDHFGRITAIIDEVGAVTRFGWT 784 Score = 87.9 bits (216), Expect = 8e-16, Method: Composition-based stats. Identities = 77/478 (16%), Positives = 135/478 (28%), Gaps = 83/478 (17%) Query: 6 RIARDAH-----YLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQ 60 R+ R Y Y YD GR + YD +R+ +T Sbjct: 556 RLVRWTDRNGHWYHYFYDDAGRCVANHSSSKYLSG--------TFSYDPDNRITRFTDAL 607 Query: 61 YAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRK-------PQVTWYGWDGDRLT 113 + Y D G +A+ + W +R + T Y +D D Sbjct: 608 GHSTV----YQLDAKGNVIAETDPLGHTTTSEWDEHNRLISRTDPLGRTTRYSYDDDGNL 663 Query: 114 TIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVL 173 T + Q+ + + V G + + + + G + + Sbjct: 664 TGVSGPDGTQSRAEYNEWGLPTSVVDPDGAVWRQSYDERGNRVS-LTDPTGATTRYSYD- 721 Query: 174 VQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPL 233 +R + + D + + R GL + V P+ + DH G Sbjct: 722 ----ERGNATAITDALGQTRRIEYDPAGLPLA--------VTDPSGATRRFERDHFGRIT 769 Query: 234 ALVSTEGAT--------------------EWCAEYDEWGNLLNEENPHQLQQLIRLPGQQ 273 A++ GA EYD GN + P L + I Q Sbjct: 770 AIIDEVGAVTRFGWTVEGKRAWRTLPDGTTERWEYDGEGNEIAYVGPSGLTRRISYT--Q 827 Query: 274 YD--------EESGLYYNRHRYYDPLQGRYITQDPIGLKGGWNFYQY----PLNPVQYID 321 +D E + L Y YDPL R + G ++Y N V+ ID Sbjct: 828 FDLPVSVTDAEGNTLTYT----YDPLL-RLTA---VTNAHGL-TWRYERDAAGNVVREID 878 Query: 322 SMGLASKYGHLNNGGYGARPNKPPTPDPSKLPDIAKQLRLPYPIDQASSAPNVFKTFFRA 381 G +Y + G +R N + + + ++ + A Sbjct: 879 YDGREIRYFYDAAGQLTSRVNGAGETTTFRRDLSGRVVERRAQDRVSTFEYDPMGRMLSA 938 Query: 382 LSPYDYTLYCRKWVKPNLTCTPQDDSQYPGMDTKTASDYLPQTNWPTTQLPPGYTCAE 439 SP D T+ R+ + + + Q + + + + Y Sbjct: 939 TSP-DATVRYRRDARGRV-LSEQINGHTVTSRYDALGRRVHRRTSTGVESTWSYDVRG 994 Score = 85.2 bits (209), Expect = 5e-15, Method: Composition-based stats. Identities = 42/232 (18%), Positives = 66/232 (28%), Gaps = 20/232 (8%) Query: 2 WPDNRIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQY 61 + R+ + Y YDR GR+ K G Y ++++ RLV Sbjct: 1130 YDGTRLTTAGNVRYTYDRQGRVVTKVRYEAGGTTLR-----WHYTWNAEDRLVEVGTPDG 1184 Query: 62 AEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRT- 120 + RYLYD LGRR+AK + + T + WDG RL Sbjct: 1185 S----RWRYLYDALGRRIAKHKLAPDGSTVV--------ERTEFIWDGVRLAEQVLAGVD 1232 Query: 121 RIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQM-LDR 179 + P F PL ++ + + G + L Sbjct: 1233 ATTWEWHPRRFRPLTQIRRRLSPAKQWVGGDFHAVITDGIGTSTELLDGSGNLAWRNRTT 1292 Query: 180 LESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKI-HLYHCDHRG 230 L + + S W + + + CD G Sbjct: 1293 LWGKTVIKHHGSASTPWRFPGQYSDPETGLHYNYHRYYDPDTGRYVSCDPLG 1344 Score = 73.3 bits (178), Expect = 2e-11, Method: Composition-based stats. Identities = 40/261 (15%), Positives = 67/261 (25%), Gaps = 35/261 (13%) Query: 9 RDAHYLYRYDRHGRLTEKTDLIPEGVI-----------RTDDERTHRYHYDSQHRLVHYT 57 Y YD G+LT + + E R +R + YD R++ T Sbjct: 880 DGREIRYFYDAAGQLTSRVNGAGETTTFRRDLSGRVVERRAQDRVSTFEYDPMGRMLSAT 939 Query: 58 RTQYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQN 117 P RY D GR +++++ + Y G R+ + Sbjct: 940 -----SPDATVRYRRDARGRVLSEQINGHTV-------------TSRYDALGRRVHRRTS 981 Query: 118 DRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQML 177 Y +R+ + T A + ++G ++ L Sbjct: 982 TGVESTWSYDVRGCPRELRM----ADRMITFGFDGAGREIERRLDNGATIAQQWDRNGRL 1037 Query: 178 DRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVS 237 I + R L V + D G + Sbjct: 1038 IDQSISIADGTPTVPPRYRLLQQRSYRYGPDGSPQAVDDTSTGTVRLQLDGTGRVRQVAG 1097 Query: 238 TEGATEWCAEYDEWGNLLNEE 258 G YD GN+ N Sbjct: 1098 PGGQ--EQYSYDRAGNIRNAS 1116 Score = 58.3 bits (139), Expect = 7e-07, Method: Composition-based stats. Identities = 64/478 (13%), Positives = 111/478 (23%), Gaps = 82/478 (17%) Query: 52 RLVHYTRTQYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWM-------------SLSR 98 RL T ++ D +G A R + Sbjct: 466 RLTAVTDRNGNRFDLDR----DAVGCVTAVRHSGGYHIEVDTDRDRITELRLRHRAEATA 521 Query: 99 KPQVTWYGWDGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQ 158 ++ Y +D L + + + + L+R G + Sbjct: 522 TTRLVRYRYDDAGLLAEVVNSSGRSLRFSYDDQSRLVRWTDRNGHWYHYFYDDAGRCVAN 581 Query: 159 SGGEDGGSVVFPPVLVQMLDRLE------SEILADRVSEESRRWLASCGLTVEQMQNQMD 212 S F + R + D T + Sbjct: 582 HSSSKYLSGTFSYDPDNRITRFTDALGHSTVYQLDAKGNVIAETDPLGHTTTSEWDEHNR 641 Query: 213 PVYTPA----RKIHLYHCDHR-------------------GLPLALVSTEGATEWCAEYD 249 + + Y D GLP ++V +GA W YD Sbjct: 642 LISRTDPLGRTTRYSYDDDGNLTGVSGPDGTQSRAEYNEWGLPTSVVDPDGA-VWRQSYD 700 Query: 250 EWGNLLNEENPHQLQQLIRL-----PGQQYDEESGLYYNRHRYYDP------------LQ 292 E GN ++ +P D L R YDP Sbjct: 701 ERGNRVSLTDPTGATTRYSYDERGNATAITDA---LGQTRRIEYDPAGLPLAVTDPSGAT 757 Query: 293 GRYITQDPIGLKGGWNFYQYPLNPVQYIDSMGLASKYGHLNNGGYGARPNKPPTPDPSKL 352 R+ +D G ID +G +++G G R T + + Sbjct: 758 RRF-ERDHFGRITAI------------IDEVGAVTRFGWTVEGKRAWRTLPDGTTERWEY 804 Query: 353 PDIAKQLRLPYPID-QASSAPNVFKTFFRALSPYDYTLYCRKWVKPNLTCTPQDDSQYPG 411 ++ P + F TL LT Sbjct: 805 DGEGNEIAYVGPSGLTRRISYTQFDLPVSVTDAEGNTLTYTYDPLLRLTAVTNAHGLTWR 864 Query: 412 MDTKTASDYLPQTNWPTTQLPPGYTCAEPYLFPDINKPDGPATAGIDDLGEILAKMKQ 469 + A + + + ++ ++ Y A L +N T D G ++ + Q Sbjct: 865 YERDAAGNVVREIDYDGREIRYFYDAAG-QLTSRVNGAGETTTFRRDLSGRVVERRAQ 921 >UniRef50_A6GLW0 Rhs family protein n=1 Tax=Limnobacter sp. MED105 RepID=A6GLW0_9BURK Length = 1598 Score = 218 bits (554), Expect = 5e-55, Method: Composition-based stats. Identities = 82/401 (20%), Positives = 142/401 (35%), Gaps = 51/401 (12%) Query: 17 YDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVE--------- 67 YD GRL + + + + RY Y+ +++LV + L Sbjct: 1127 YDPQGRLVGQVNRREKSSELSPTVSRRRYCYNQRNQLVRIDDQGHGTSLYHYDLLDRLRV 1186 Query: 68 ------SRYLYDPLGRRVAKRVWR--------------------RERDLTGWMSLSRKPQ 101 +L+DP + V + R + G + + Sbjct: 1187 VEGPAPEAFLFDPASNLLEALVGQEATDAQVNKALPEPSSPNARRPQQTPGNRLKRQGNR 1246 Query: 102 VTWYGWDGDRLTT--IQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQS 159 Y G+R+ + R T Y + L+ V G + + +L + +S Sbjct: 1247 RFNYDERGNRIEEIIERGARQGQVTRYSHNAQNQLVEVN-VAGVVTRYTYDALGRRISKS 1305 Query: 160 GGEDGGSVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPAR 219 + ++ + +R SR +L + Sbjct: 1306 SEHGNTIFYWNGDVLLGEINSGFDHEQNRP---SRTYLFEPFSFKPLALVE-------NG 1355 Query: 220 KIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEESG 279 ++ YH DH G P + + W + + +G L+ + ++++ +R GQ +D E+G Sbjct: 1356 EVFHYHTDHIGTPREITNASAEVVWSSTFKTYGALVL-AHVNEVENPLRFQGQYFDSETG 1414 Query: 280 LYYNRHRYYDPLQGRYITQDPIGLKGGWNFYQYPLNPVQYIDSMGLASKYGHLNNGGYGA 339 L+YNRHRYYDP G++ TQDPIGL GG N YQY NP+ ++D GL+ K N Sbjct: 1415 LHYNRHRYYDPNCGQFTTQDPIGLLGGMNTYQYAPNPMTWVDPWGLSCK--DQANSIETK 1472 Query: 340 RPNKPPTPDPSKLPDIAKQLRLPYPIDQASSAPNVFKTFFR 380 R + D + + + DQ Sbjct: 1473 RQLERLPDDLAGTFEGGRYTSRVLEEDQVLHRAGTADRPLG 1513 Score = 84.1 bits (206), Expect = 1e-14, Method: Composition-based stats. Identities = 63/450 (14%), Positives = 118/450 (26%), Gaps = 52/450 (11%) Query: 18 DRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESR----YLYD 73 D G + + T Y+ Q + + + VE R Y Y+ Sbjct: 550 DAFGNTLRIDYSEGKATHLYSSQTTWALGYNEQGLVSQIAQIGATQIGVEQRVLVQYRYN 609 Query: 74 PLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQPGSFTP 133 P G+ VA +L Y ++ + + ++ ++ Sbjct: 610 PQGQLVAATDAAGFEEL--------------YAYNARNVLVRRTLKSGYNIHFEWEQVGE 655 Query: 134 LIRVETATGE----LAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQM--------LDRLE 181 R G+ R D + G + + Sbjct: 656 QSRCTRQWGDPIEGKPTYHYRFEWDDKHVAIDSRGARTEYQFNAQGLPVLEKGPEGGVTR 715 Query: 182 SEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGA 241 + A+ E L Q + R++H + D +G L ++ G Sbjct: 716 TRYNANGQVLECVDALGHSEKFQYNSQGHLVGYTNKLRQLHRFEVDAQGQVLKHINAAGH 775 Query: 242 TEWCAEYDEWGNLLNEENPHQLQQLIRLP--GQQYDEESGLYYNRHRYYDPLQGRYITQD 299 Y G L + + R G + + L Y+ G+ Q Sbjct: 776 VR-SNTYTSEGLLASHTDATGATTRYRYNNLGLLCEITNPLGQCTRMLYNAQ-GQVQAQ- 832 Query: 300 PIGLKGGWNFYQY--------PLNPVQYIDSMGLASKYGHLNNGGYGARPNKP--PTPDP 349 I G N YQ+ NP +G ++ Y + G N T Sbjct: 833 -INALGQGNTYQFDAWGRLASVTNP------LGRSAYYAYDLMGRCTRATNHEGLSTEYA 885 Query: 350 SKLPDIAKQLRLPYPIDQASSAPNVFKTFFRALSPYDYTLYCRKWVKPNLTCTPQDDSQY 409 +++ P + + +TL R + NL ++SQ Sbjct: 886 YSPLGQLERITDPTGRSTVYEYADKLSQPTARIDAQGFTLRYRYDTERNLIELLNENSQS 945 Query: 410 PGMDTKTASDYLPQTNWPTTQLPPGYTCAE 439 + A + ++ + Y A Sbjct: 946 CRFEYDLAEHLVKESGFDGRVQTYQYNLAG 975 Score = 81.8 bits (200), Expect = 5e-14, Method: Composition-based stats. Identities = 40/182 (21%), Positives = 62/182 (34%), Gaps = 36/182 (19%) Query: 3 PDNRIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYA 62 P NR+ R + + YD G E+ + RY +++Q++LV Sbjct: 1236 PGNRLKRQGNRRFNYDERGNRIEEIIERGA-----RQGQVTRYSHNAQNQLVEV-----N 1285 Query: 63 EPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDR--- 119 V +RY YD LGRR++K T + W+GD L N Sbjct: 1286 VAGVVTRYTYDALGRRISKSSEHGN---------------TIFYWNGDVLLGEINSGFDH 1330 Query: 120 ----TRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQ 175 +++P SF PL VE GE+ + + VV+ Sbjct: 1331 EQNRPSRTYLFEPFSFKPLALVE--NGEVFHYHTDHIG--TPREITNASAEVVWSSTFKT 1386 Query: 176 ML 177 Sbjct: 1387 YG 1388 Score = 61.4 bits (147), Expect = 7e-08, Method: Composition-based stats. Identities = 38/267 (14%), Positives = 73/267 (27%), Gaps = 45/267 (16%) Query: 8 ARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVE 67 A A YRY+ G L E T+ + + R Y++Q + V + Sbjct: 793 ATGATTRYRYNNLGLLCEITNPL---------GQCTRMLYNAQGQ-VQAQINALGQGN-- 840 Query: 68 SRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQ 127 Y +D GR + + + +Y +D T + + T Y Sbjct: 841 -TYQFDAWGRLASVT--------------NPLGRSAYYAYDLMGRCTRATNHEGLSTEYA 885 Query: 128 PGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILAD 187 L R+ TG + G ++ + + L L +E Sbjct: 886 YSPLGQLERITDPTGRSTVYEYADKLSQPTARIDAQGFTLRYRYDTERNLIELLNE---- 941 Query: 188 RVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLA-----LVSTEGAT 242 + +S R+ + + ++ Y + G + + Sbjct: 942 --NSQSCRFEYD-------LAEHLVKESGFDGRVQTYQYNLAGHLVEKQEWGVCGQAPLV 992 Query: 243 EWCAEYDEWGNLLNEENPHQLQQLIRL 269 D G LL + + Sbjct: 993 YTRYTRDALGRLLQTRHSDGEEATFAY 1019 Score = 52.9 bits (125), Expect = 3e-05, Method: Composition-based stats. Identities = 42/318 (13%), Positives = 81/318 (25%), Gaps = 76/318 (23%) Query: 13 YLYRYDRHGRLTEKTDLIPEGVIRT-----------DDERTHRYHYDSQHRLV------- 54 Y D GRL + E + R+ ++ D++ R++ Sbjct: 994 TRYTRDALGRLLQTRHSDGEEATFAYCPQGPLIQANNSNRSVQWEVDAEGRVLAELQGQH 1053 Query: 55 --------------HYTRTQYAEPLVESRYLYDPL---------GRRVAKRVWRRERDLT 91 + P Y Y+ L G +A+ Sbjct: 1054 RVEHQYNPAGWLKQSSWGSMGGLPSGVLGYQYNALGLIGEINFNGELLAQFERDMLGREV 1113 Query: 92 GWMSLSRKPQVTWYGWDGDRLTTIQN-------DRTRIQTIYQPGSFTPLIRVETATGEL 144 ++ + Y G + + T + Y L+R++ G Sbjct: 1114 VRKLGNQVHTQSLYDPQGRLVGQVNRREKSSELSPTVSRRRYCYNQRNQLVRIDDQ-GHG 1172 Query: 145 AKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTV 204 L D L+ G + +F P +L+ L + D ++ +S Sbjct: 1173 TSLYHYDLLDRLRVVEGPAPEAFLFDPASN-LLEALVGQEATDAQVNKALPEPSSPNARR 1231 Query: 205 EQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGA----------------------- 241 Q R+ + D RG + + GA Sbjct: 1232 PQQTPGNRLKRQGNRRFNY---DERGNRIEEIIERGARQGQVTRYSHNAQNQLVEVNVAG 1288 Query: 242 TEWCAEYDEWGNLLNEEN 259 YD G +++ + Sbjct: 1289 VVTRYTYDALGRRISKSS 1306 >UniRef50_A1TJG7 YD repeat protein n=4 Tax=Proteobacteria RepID=A1TJG7_ACIAC Length = 1604 Score = 218 bits (554), Expect = 5e-55, Method: Composition-based stats. Identities = 102/418 (24%), Positives = 148/418 (35%), Gaps = 87/418 (20%) Query: 4 DNRIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYT----RT 59 NR+ + YD GRL K R YD+ HR++ + Sbjct: 1150 HNRVKVLQDKRFDYDGFGRLVRK---------RIGGHTELHCRYDALHRMIAASVIRAGR 1200 Query: 60 QYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDR 119 RY YDPLGRR+AK E T + W+G RL Sbjct: 1201 DGEPIRQVFRYRYDPLGRRIAKEDDFGE---------------TRFVWEGMRLLQESRGA 1245 Query: 120 TRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDR 179 +Y+P S+ PL R++ + LA + G+ V + V D Sbjct: 1246 HNSTYLYEPSSYRPLARIDGTGPLEPEHPVAVLALAGEDPRGDPAAGKV-RSIPVTNGDA 1304 Query: 180 LESEILADRVSEESRRWLA--------------SCGLTVEQMQNQMDPVYTPARKIHLYH 225 ++ + R+LA Q TP+ +I+ +H Sbjct: 1305 SDARHAVAGPVGATARYLAEVEALERGAGPDEPGQSTGRGGQARQTQSASTPSARIYYFH 1364 Query: 226 CDHRGLPLALVSTEGATEWCAEYDEWGNLLNEE------------------------NPH 261 GLP + G W A+Y WGN + EE + Sbjct: 1365 LQPSGLPEEMSDRNGHLVWRAQYRLWGNAVAEEWQAFDATGRPVNAPMAETGIRAQVSAS 1424 Query: 262 QLQQLIRLPGQQYDEESGLYYNRHRYYDPLQGRYITQDPIGLKGGWNFYQYPLNPVQYID 321 Q +R+ GQ D E+GL+YN RYYDP G + T DPIGL GG N + Y NP+ +ID Sbjct: 1425 PAPQNLRMQGQYLDRETGLHYNTFRYYDPDLGAFTTPDPIGLAGGLNLHGYAANPLSWID 1484 Query: 322 SMGLASKYGHLNNGGYGARPNKPPTPDPSKLPDIAKQLRLPYPIDQASSAPNVFKTFF 379 G A P+K+ A++ R+ +D A NV + + Sbjct: 1485 PWGWACI--------------------PNKVAGTAREARVGAKLDGKFGASNVLRERY 1522 Score = 72.1 bits (175), Expect = 4e-11, Method: Composition-based stats. Identities = 25/145 (17%), Positives = 42/145 (28%), Gaps = 27/145 (18%) Query: 10 DAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESR 69 Y +D GRL T D RY YD +LV + Sbjct: 728 GQITHYVHDALGRLLSVT---------RADGTAERYTYDGADQLVSA----GDSSNRLTH 774 Query: 70 YLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQPG 129 Y YD G+ +A + G+ + RL ++ ++ + Sbjct: 775 YRYDIHGKLLALQRPDGSTVHLGYDA-------------AHRLASLVSENGA-NYRFAYD 820 Query: 130 SFTPLIRVETATGELAKTQRRSLAD 154 + L++ + G SL Sbjct: 821 TANRLVQEQRPDGSRHTFSHDSLGR 845 Score = 70.6 bits (171), Expect = 1e-10, Method: Composition-based stats. Identities = 39/267 (14%), Positives = 70/267 (26%), Gaps = 39/267 (14%) Query: 8 ARDAHYLYRYDRHGRLTEKTDLIPEGVI-------------RTDDERTHRYHYDSQHRLV 54 A + + + YDR G L TD + + D Y YD + Sbjct: 583 ADGSRFTFTYDRLGNLNGATDPLGQTARLDWHERLQRVRAATAVDGTRWHYTYDDRGNRT 642 Query: 55 HY--------TRTQYAEPLVESRYL----YDPLGRRVAKRVWRRERDLTGWMS------- 95 T E R+ +DP G V R W Sbjct: 643 EVLGPPLKPGTPPHIPSDGDEVRWRESTLHDPRGLPVVTIDANGGRQQWTWDERALLVRH 702 Query: 96 LSRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADT 155 + T + +DG+ + D T Y + L+ V A G + Sbjct: 703 TDCSGKTTRFEYDGNGFLSKHIDALGQITHYVHDALGRLLSVTRADGTAERYTYDGADQL 762 Query: 156 LQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSEESRRWL-------ASCGLTVEQMQ 208 + + + + ++L + + ++ L + Sbjct: 763 VSAGDSSNRLTHYRYDIHGKLLALQRPDGSTVHLGYDAAHRLASLVSENGANYRFAYDTA 822 Query: 209 NQMDPVYTPARKIHLYHCDHRGLPLAL 235 N++ P H + D G + L Sbjct: 823 NRLVQEQRPDGSRHTFSHDSLGRVVEL 849 Score = 66.4 bits (160), Expect = 3e-09, Method: Composition-based stats. Identities = 39/303 (12%), Positives = 75/303 (24%), Gaps = 71/303 (23%) Query: 3 PDNRIARDAHYL-----YRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYT 57 P +R R +L + +D +T D + + R ++ +L+ +T Sbjct: 531 PGDRRTRVTDHLGRVQLFDHDADQNVTRIEDPL---------GQVQRMEWNDLWQLLAWT 581 Query: 58 RTQYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQN 117 R + + YD LG + Q W +RL ++ Sbjct: 582 RADGS----RFTFTYDRLGNL--------------NGATDPLGQTARLDWH-ERLQRVRA 622 Query: 118 DRT--RIQTIYQPGSFTPLIRVETAT---GELAKTQRRSLADTLQQSGGEDGGSV----- 167 + Y V G ++S D + Sbjct: 623 ATAVDGTRWHYTYDDRGNRTEVLGPPLKPGTPPHIPSDGDEVRWRESTLHDPRGLPVVTI 682 Query: 168 -VFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHC 226 D + S ++ R+ + + + + +I Y Sbjct: 683 DANGGRQQWTWDERALLVRHTDCSGKTTRFEYDGNGFLSKHIDAL-------GQITHYVH 735 Query: 227 DHRGLPLALVSTEG--------------------ATEWCAEYDEWGNLLNEENPHQLQQL 266 D G L++ +G YD G LL + P Sbjct: 736 DALGRLLSVTRADGTAERYTYDGADQLVSAGDSSNRLTHYRYDIHGKLLALQRPDGSTVH 795 Query: 267 IRL 269 + Sbjct: 796 LGY 798 Score = 65.2 bits (157), Expect = 5e-09, Method: Composition-based stats. Identities = 51/330 (15%), Positives = 78/330 (23%), Gaps = 61/330 (18%) Query: 15 YRYDRHGRLTEKTDLIPEGVIRT------------DDERTHRYHYDS---QHRLVHYTRT 59 YRYD G+L + D + V R RY +D Q R+V + Sbjct: 450 YRYDTRGQLAQVIDRLGRCVRRFTWEGATLVAQTFASGLVARYRWDGPAPQGRVVQHWLE 509 Query: 60 QYAE--PLVESRYLYDPLG-----RRVAKRVWRRERDLTGWMSLSR-------KPQVTWY 105 A P + YD G RR L + QV Sbjct: 510 DAAPGMPATAWTFEYDLPGERPGDRRTRVTDHLGRVQLFDHDADQNVTRIEDPLGQVQRM 569 Query: 106 GW-DGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDG 164 W D +L + + L G+ A+ ++ + DG Sbjct: 570 EWNDLWQLLAWTRADGS-RFTFTYDRLGNLNGATDPLGQTARLDWHERLQRVRAATAVDG 628 Query: 165 GSVVFPPVLVQMLD----------------------RLESEILADRVSEESRRWLASCGL 202 + R L D A+ G Sbjct: 629 TRWHYTYDDRGNRTEVLGPPLKPGTPPHIPSDGDEVRWRESTLHDPRGLPVVTIDANGGR 688 Query: 203 TVEQMQNQMDPVYTPA--RKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENP 260 + V K + D G + G +D G LL+ Sbjct: 689 QQWTWDERALLVRHTDCSGKTTRFEYDGNGFLSKHIDALGQIT-HYVHDALGRLLSVTRA 747 Query: 261 HQLQQLIRLPGQQY-----DEESGLYYNRH 285 + G D + L + R+ Sbjct: 748 DGTAERYTYDGADQLVSAGDSSNRLTHYRY 777 Score = 57.5 bits (137), Expect = 1e-06, Method: Composition-based stats. Identities = 46/254 (18%), Positives = 74/254 (29%), Gaps = 42/254 (16%) Query: 18 DRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAE--PLVESRYLYDPL 75 D GRL K G + D R+ YD +RLV A P + + Y L Sbjct: 879 DGIGRLIAKRVQAMTGAPSSQDTIEQRFAYDKMNRLVRAETLDAAGQSPAQVAEFGYTLL 938 Query: 76 GRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQPGSFTPLI 135 G + +S +R G+RL T D ++ ++ + Sbjct: 939 GDL-------AQEAAEDVVSGTRSVMRHTCDPLGNRLATELPDGRLLRELHY--GSGHVH 989 Query: 136 RVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSEESRR 195 ++ +A +R L + ++ G R S D + + + Sbjct: 990 QISLDGVVVADIERDDLHREVLRTQG-----------------RWASRWAYDPLGRQRAQ 1032 Query: 196 WLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLL 255 W S L V Q P A P L +YD G L+ Sbjct: 1033 WTQSASLRVGGNWAQQMPDAANASG-----------PGMLTDG---LRKQWDYDAAGELV 1078 Query: 256 NEENPHQLQQLIRL 269 + + R Sbjct: 1079 RTRHSRNGETQYRY 1092 Score = 57.1 bits (136), Expect = 2e-06, Method: Composition-based stats. Identities = 31/276 (11%), Positives = 63/276 (22%), Gaps = 54/276 (19%) Query: 4 DNRIARDAHY---LYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQ 60 + R + YD GR ++ +R + D+ + + Sbjct: 1007 HREVLRTQGRWASRWAYDPLGR--QRAQWTQSASLRVGGNWAQQMP-DAAN----ASGPG 1059 Query: 61 YAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSR---------------------- 98 + ++ YD G V R R + Sbjct: 1060 MLTDGLRKQWDYDAAGELVRTRHSRNGETQYRYDPAGHVLSATLQAAGAAGGLSPALQQA 1119 Query: 99 KPQVTWYGWDGDRLTTIQNDRTR--------------IQTIYQPGSFTPLIRVETATGEL 144 +V Y G+RL + F L+R Sbjct: 1120 LHEVFHYDPAGNRLDAPVPQGAEGSRGWVRHNRVKVLQDKRFDYDGFGRLVRKRIGGHTE 1179 Query: 145 AKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTV 204 + +L + S G + + +A R++ + Sbjct: 1180 LHCRYDALHRMIAASVIRAGRDGEPIRQVFRYRYDPLGRRIAKEDDFGETRFVWEGMRLL 1239 Query: 205 EQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEG 240 ++ + + Y + PLA + G Sbjct: 1240 QESRGAHNSTYLYEPSSY--------RPLARIDGTG 1267 Score = 44.0 bits (102), Expect = 0.012, Method: Composition-based stats. Identities = 55/460 (11%), Positives = 116/460 (25%), Gaps = 113/460 (24%) Query: 52 RLVHYTRTQYAEPLVESRYLYDPLGR------RVAKRVWRRERDLTGWMSLSRKPQ-VTW 104 RLV T Y YD G+ R+ + V R + ++ + V Sbjct: 432 RLVRVDLTAGGPAGTLVEYRYDTRGQLAQVIDRLGRCVRRFTWEGATLVAQTFASGLVAR 491 Query: 105 YGWD------------------------------------GDRLTTIQNDRTRIQTIYQP 128 Y WD GDR T + D ++ Sbjct: 492 YRWDGPAPQGRVVQHWLEDAAPGMPATAWTFEYDLPGERPGDRRTRV-TDHLGRVQLFDH 550 Query: 129 GSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFP-------------PVLVQ 175 + + R+E G++ + + L L + + + Sbjct: 551 DADQNVTRIEDPLGQVQRMEWNDLWQLLAWTRADGSRFTFTYDRLGNLNGATDPLGQTAR 610 Query: 176 MLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDP--------VYTPARKIHL---Y 224 + + + + + RW + + + P + + ++ Sbjct: 611 LDWHERLQRVRAATAVDGTRWHYTYDDRGNRTEVLGPPLKPGTPPHIPSDGDEVRWREST 670 Query: 225 HCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEESGLYYNR 284 D RGLP+ + G +DE L+ + G N Sbjct: 671 LHDPRGLPVVTIDANGG-RQQWTWDERALLVRHTDCSGKTTRFEYDG-----------NG 718 Query: 285 HRYYDPLQGRYITQDPIGLKGGWNFYQYPLNPVQYIDSMGLASKYGHLNNGGYGARPNKP 344 ++++ +ID++G + Y H G + Sbjct: 719 ----------FLSK--------------------HIDALGQITHYVHDALGRLLSVTRAD 748 Query: 345 PTPDPSKLPDIAKQLRLPYPIDQASS--APNVFKTFFRALSPYDYTLYCRKWVKPNLTCT 402 T + D A QL + ++ P T++ L Sbjct: 749 GTAE-RYTYDGADQLVSAGDSSNRLTHYRYDIHGKLLALQRPDGSTVHLGYDAAHRLASL 807 Query: 403 PQDDSQYPGMDTKTASDYLPQTNWPTTQLPPGYTCAEPYL 442 ++ TA+ + + ++ + + Sbjct: 808 VSENGANYRFAYDTANRLVQEQRPDGSRHTFSHDSLGRVV 847 Score = 41.7 bits (96), Expect = 0.065, Method: Composition-based stats. Identities = 23/200 (11%), Positives = 48/200 (24%), Gaps = 4/200 (2%) Query: 73 DPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTI---QNDRTRIQTIYQPG 129 D G + S + + + G RL + Y+ Sbjct: 394 DFNGNTIDFHRDADGVVRHVTDSAGHRLALRYAQAGGLRLVRVDLTAGGPAGTLVEYRYD 453 Query: 130 SFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRV 189 + L +V G + A + Q+ + ++ + Sbjct: 454 TRGQLAQVIDRLGRCVRRFTWEGATLVAQTFASGLVARYRWDGPAPQGRVVQHWLEDAAP 513 Query: 190 SEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWCAEYD 249 + W L E+ ++ V ++ L+ D + G + D Sbjct: 514 GMPATAWTFEYDLPGERPGDRRTRVTDHLGRVQLFDHDADQNVTRIEDPLGQVQRMEWND 573 Query: 250 EWGNLLNEENPHQLQQLIRL 269 W LL + Sbjct: 574 LW-QLLAWTRADGSRFTFTY 592 >UniRef50_O52663 Core protein (Fragment) n=5 Tax=Enterobacteriaceae RepID=O52663_ECOLX Length = 350 Score = 217 bits (553), Expect = 6e-55, Method: Composition-based stats. Identities = 153/219 (69%), Positives = 173/219 (78%) Query: 120 TRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDR 179 TRIQT+YQPGSF PLIR+ET GE K QRRSLA+ LQQ G EDG VVFP LV++LDR Sbjct: 1 TRIQTVYQPGSFAPLIRIETDNGEREKAQRRSLAEKLQQEGSEDGHGVVFPAELVRLLDR 60 Query: 180 LESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTE 239 LE EI ADRVS ESR WLA CGLTVEQ+ Q++P YTPARK+H YHCDHRGLPLAL+S + Sbjct: 61 LEEEIRADRVSSESRAWLAQCGLTVEQLARQVEPEYTPARKVHFYHCDHRGLPLALISED 120 Query: 240 GATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEESGLYYNRHRYYDPLQGRYITQD 299 G T W EYDEWGN LNEENP+ L Q RLPGQQ+DEESGLYYNR+RYYDPLQGRYITQD Sbjct: 121 GNTAWRGEYDEWGNQLNEENPYYLHQPYRLPGQQHDEESGLYYNRNRYYDPLQGRYITQD 180 Query: 300 PIGLKGGWNFYQYPLNPVQYIDSMGLASKYGHLNNGGYG 338 PIGL GGWN Y YPLNP+ +D +GL + Y L + + Sbjct: 181 PIGLAGGWNLYNYPLNPIIRMDPLGLYNLYQLLYDVWHD 219 >UniRef50_C9Y459 Putative uncharacterized protein n=1 Tax=Cronobacter turicensis RepID=C9Y459_CROTZ Length = 1523 Score = 216 bits (551), Expect = 1e-54, Method: Composition-based stats. Identities = 80/399 (20%), Positives = 142/399 (35%), Gaps = 25/399 (6%) Query: 12 HYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYL 71 YR+DR ++ ++ + + + YD+ ++ EP E R+ Sbjct: 1088 ERRYRWDRTDQIVQQIHTDSTPATPGEKYSQYLWGYDAAGQVTKA-----VEPQKEERFF 1142 Query: 72 YDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQPGSF 131 +D G R + W +L + +DG T + D++ + + Sbjct: 1143 WDAAGNRTEEHR------NPVWHNLLLRLDGLKLDYDGFGRLTRRQDKSGVVQHFAYDDE 1196 Query: 132 TPLIRVETATGE---LAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADR 188 + + + + L + G +L E +DR Sbjct: 1197 QRVKEIRFEGNTKFRRVEYRYDPLGRRTHKILWRYGEKDPETIRFDWQGLQLAGE-QSDR 1255 Query: 189 VSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWCAEY 248 + +++ + G + +I+ YH + GLP + G T W ++ Sbjct: 1256 EPDHYVQYVYTEGSYEPLARVDSVY---DDCEIYWYHTELNGLPERVTDANGQTVWRGQF 1312 Query: 249 DEWGNLLNEENPHQL--QQLIRLPGQQYDEESGLYYNRHRYYDPLQGRYITQDPIGLKGG 306 WG E + Q Q +R GQ D ESGL+YN RYYDP+ GRY DPIGL GG Sbjct: 1313 STWGETERELSVPQWQVPQNLRFQGQYLDRESGLHYNLFRYYDPVAGRYTQMDPIGLLGG 1372 Query: 307 WNFYQYPLNPVQYIDSMGLASKYGHLNNGGYGARPNKPPTPDPSKLPDIAKQLRLPYPID 366 N Y Y +P+ ++D +GL + G + + + + + + + ID Sbjct: 1373 INTYGYVPDPLTWVDPLGLCFSKRLGDFGESHVKSQLERSGNYADVFSVQNKS--NNGID 1430 Query: 367 QASSAPNVFKTFFRALSPYD---YTLYCRKWVKPNLTCT 402 + FF + L R+ + T Sbjct: 1431 LVGLRHDGKYDFFEVKTNTTGSVGKLSDRQLSSKDFIET 1469 Score = 67.9 bits (164), Expect = 9e-10, Method: Composition-based stats. Identities = 39/290 (13%), Positives = 69/290 (23%), Gaps = 41/290 (14%) Query: 7 IARDAHYLYRYDRHGRLTEKTDLIPEGVIRT-------------DDERTHRYHYDSQHRL 53 + ++Y YD HG LTE D + T D +Y Y+++ + Sbjct: 656 TPDGSRWVYGYDEHGNLTEVRDPLGNSTFTTWHPVFAFPVKEVLPDGAAWQYEYNARGDV 715 Query: 54 VHYTRTQYAEPLVESRYLYDPLG---------RRVAKRVWRRERDLTGWMSLSRKPQVTW 104 V T + +R+ ++ G + W L S Sbjct: 716 VALTDPKGG----VTRFEWNEQGDLVQQTDALNNTHRFWWNERGQLVRDEDCSGNQSQRL 771 Query: 105 YGWDGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLA-------DTLQ 157 Y G L+ + + + L A G + + D L+ Sbjct: 772 YDDAGRPLSASDAEGNTDRWALT--AAGRLRTWRRADGRETHYEYDNAGLLCGQDDDGLR 829 Query: 158 QSGGEDGGSVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTP 217 + ++ Sbjct: 830 ERKVTRNARGQVVSAADPAGHLTRLRYDRFGRLTTLVNPNRESWRFEYDAAGRLTGQRDY 889 Query: 218 ARKIHLYHCDHRGLPLALV------STEGATEWCAEYDEWGNLLNEENPH 261 A ++ Y D G ++ S + EYD G L E Sbjct: 890 AGRLTEYRHDALGQVTEVIRHPLPGSPDAPLVTAFEYDVLGRLTARETAE 939 Score = 66.8 bits (161), Expect = 2e-09, Method: Composition-based stats. Identities = 47/290 (16%), Positives = 67/290 (23%), Gaps = 53/290 (18%) Query: 17 YDRHGRLTEKTDLIPEG-------------VIRTDDERTHRYHYDSQHRLVHYTRTQYAE 63 +D R+TE TD T D Y YD L Sbjct: 623 WDFLYRITEYTDRHGGVWRYEWADYAELLKAATTPDGSRWVYGYDEHGNLTEVRDPLGNS 682 Query: 64 PLVESR------------------YLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWY 105 Y Y+ G VA K VT + Sbjct: 683 TFTTWHPVFAFPVKEVLPDGAAWQYEYNARGDVVALTDP--------------KGGVTRF 728 Query: 106 GWDGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGG 165 W+ Q D + L+R E +G ++ L S E Sbjct: 729 EWNEQGDLVQQTDALNNTHRFWWNERGQLVRDEDCSGNQSQRLYDDAGRPLSASDAEGNT 788 Query: 166 -----SVVFPPVLVQMLDRLESEILADRVSEESRRWLAS--CGLTVEQMQNQMDPVYTPA 218 + + D E+ D + + Q+ PA Sbjct: 789 DRWALTAAGRLRTWRRADGRETHYEYDNAGLLCGQDDDGLRERKVTRNARGQVVSAADPA 848 Query: 219 RKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIR 268 + D G LV+ W EYD G L + + R Sbjct: 849 GHLTRLRYDRFGRLTTLVNPNRE-SWRFEYDAAGRLTGQRDYAGRLTEYR 897 Score = 66.8 bits (161), Expect = 2e-09, Method: Composition-based stats. Identities = 43/289 (14%), Positives = 68/289 (23%), Gaps = 42/289 (14%) Query: 6 RIARDAHYLYRYDRHG------------RLTEKTDLIPEGVIRTDDERTHRYHYDSQHRL 53 R A Y YD G R + R YD RL Sbjct: 803 RRADGRETHYEYDNAGLLCGQDDDGLRERKVTRNARGQVVSAADPAGHLTRLRYDRFGRL 862 Query: 54 VHYTRTQYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQ------------ 101 R+ YD GR +R + +L + + Sbjct: 863 TTLVNPNRES----WRFEYDAAGRLTGQRDYAGRLTEYRHDALGQVTEVIRHPLPGSPDA 918 Query: 102 --VTWYGWDGD-RLTTIQNDRTRIQTIYQPGSF--TPLIRVETATGELAKTQ--RRSLAD 154 VT + +D RLT + R + + S R E L + + ++ Sbjct: 919 PLVTAFEYDVLGRLTARETAEHRTEYRHDTLSLEIRRATRAEWRQALLEEREPAWDAVLV 978 Query: 155 TLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRV-SEESRRWLASCGLTVEQMQNQMDP 213 + + GE D L + E G +E Sbjct: 979 FTRNAAGELVSEENHGGKFEYEYDALGNLSSTTFPDGRELATLRYGTGHLLEMQLRHGG- 1037 Query: 214 VYTPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQ 262 + Y D + ++G YD G + Sbjct: 1038 ---ATHTLAAYGRDRLH--REISRSQGVLSQETRYDSAGRVTQRTVLDA 1081 Score = 65.2 bits (157), Expect = 5e-09, Method: Composition-based stats. Identities = 64/487 (13%), Positives = 121/487 (24%), Gaps = 63/487 (12%) Query: 15 YRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYLYDP 74 Y +D HGRL + + E++H RL + E + Y Y+ Sbjct: 477 YSWDEHGRLARISGDNEALDVELAYEKSH-------GRLASVHQVCNGERRLLVTYGYNE 529 Query: 75 LGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWD--GDRLTTIQ-NDRTRIQTIYQPGSF 131 G+ + +GWD D + + + +QP + Sbjct: 530 NGQLIEVTDADGIV-------------TRRFGWDRASDMMGWHSYSTNLSVHYQWQPAAD 576 Query: 132 TPLIRV---ETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADR 188 P RV + + +R + + F +E Sbjct: 577 APNWRVCSYQVLDDQDNVLERWRIDADEAKRCATVSCDAGFSTRHCWDFLYRITEYTDRH 636 Query: 189 VSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGA------- 241 W + TP +Y D G + G Sbjct: 637 GGVWRYEWAD--------YAELLKAATTPDGSRWVYGYDEHGNLTEVRDPLGNSTFTTWH 688 Query: 242 --------------TEWCAEYDEWGNLLNEENPHQLQQLIRLPGQ-QYDEESGLYYNRHR 286 W EY+ G+++ +P Q +++ N HR Sbjct: 689 PVFAFPVKEVLPDGAAWQYEYNARGDVVALTDPKGGVTRFEWNEQGDLVQQTDALNNTHR 748 Query: 287 YYDPLQGRYITQDPIGLKGGWNFYQYPLNPVQYIDSMGLASKYGHLNNGGYGARPNKPPT 346 ++ +G+ + + Y P+ D+ G ++ G Sbjct: 749 FWWNERGQLVRDEDCSGNQSQRLYDDAGRPLSASDAEGNTDRWALTAAGRLRTWRRADGR 808 Query: 347 PDPSKLPDIAKQ-LRLPYPIDQASSAPNVFKTFFRALSPYDYTLYCRKWVKPNLTCTPQD 405 + + + + + N A P + R LT Sbjct: 809 ETHYEYDNAGLLCGQDDDGLRERKVTRNARGQVVSAADPAGHLTRLRYDRFGRLTTLVNP 868 Query: 406 DSQYPGMDTKTASDYLPQTNWPTTQLPPGYTCAEPYL----FPDINKPDGPATAGI--DD 459 + + + A Q ++ + P PD P D Sbjct: 869 NRESWRFEYDAAGRLTGQRDYAGRLTEYRHDALGQVTEVIRHPLPGSPDAPLVTAFEYDV 928 Query: 460 LGEILAK 466 LG + A+ Sbjct: 929 LGRLTAR 935 >UniRef50_Q4ZP55 YD repeat n=10 Tax=Pseudomonas syringae group RepID=Q4ZP55_PSEU2 Length = 955 Score = 216 bits (550), Expect = 1e-54, Method: Composition-based stats. Identities = 60/359 (16%), Positives = 98/359 (27%), Gaps = 42/359 (11%) Query: 10 DAHYLYRYDRHGRLTEKTDLIPEGVIRTDD--ERTHRYHYDSQHRLVHYTRTQYAEPL-- 65 Y YD G + D + E R+ YD+ ++L+ + + Sbjct: 295 LQQLNYSYDPVGNILLVNDASQPDRYCDNQLIEPISRFAYDTLYQLIEASGREVRNGASH 354 Query: 66 --------------------VESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQV--- 102 Y YD G + R + Sbjct: 355 GPALPGLQSLPTIDPCQVSNYTQSYSYDAAGNLLQMRHEGAHNFTRNMHVAPDSNRSLPD 414 Query: 103 --------TWYGWDGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLAD 154 T + +G+ L ++ R + T ++R E Sbjct: 415 DDGDVDFATSFDANGNLLQLVRGQALRWNARNELQLITTVVRAEDPNDSE-TYIYDGQGK 473 Query: 155 TLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPV 214 ++ + V+ L LE AD A P Sbjct: 474 RCRKITSAQAHNRTLL-DEVRYLPGLEIRTRADGEILHVITAQAGRNSVRVLHWEAGKPG 532 Query: 215 YTPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLI---RLPG 271 ++ DH G + +G Y +G ++ R G Sbjct: 533 AIANDQVRYSLGDHLGSSTLELDQQGGLISQESYYPFGGTAWWAARSAVEAKYKTVRYSG 592 Query: 272 QQYDEESGLYYNRHRYYDPLQGRYITQDPIGLKGGWNFYQYP-LNPVQYIDSMGLASKY 329 ++ D SGLYY RYY P R+I DP G G N + + NP+ D G +S+ Sbjct: 593 KERDA-SGLYYYGFRYYAPWLQRWINPDPAGDVDGLNLFGFVGNNPLNLFDPDGQSSQK 650 >UniRef50_D1T3N4 YD repeat protein n=2 Tax=Betaproteobacteria RepID=D1T3N4_9BURK Length = 1584 Score = 216 bits (549), Expect = 2e-54, Method: Composition-based stats. Identities = 92/389 (23%), Positives = 134/389 (34%), Gaps = 70/389 (17%) Query: 4 DNRIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAE 63 NR+ Y YD GRL K R + YD+QHR+ H + + + Sbjct: 1161 HNRVKVLQDKRYDYDGFGRLIRK---------RIGGHTELHFRYDAQHRMTHASVIRAGQ 1211 Query: 64 PL----VESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDR 119 RY YD +GRR+AK T + W+G RL Sbjct: 1212 NGEPLRQVFRYHYDAIGRRIAKE---------------DDFGATLFTWEGMRLLQECRGG 1256 Query: 120 TRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDR 179 +Y+P S+ PL R++ A F P Sbjct: 1257 QSSTYLYEPESYVPLARIDGAGAIEEH----------------PAARYAFGPDARAGKQA 1300 Query: 180 LESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTE 239 + D S + A+ G +V P +++ +H GLP + T Sbjct: 1301 SVPDTNPDWSSRFNA-VAANAGGSVSGTSAPSSAPMEPTAQVYYFHVQPNGLPEEMSDTR 1359 Query: 240 GATEWCAEYDEWGNL------------------------LNEENPHQLQQLIRLPGQQYD 275 G W A Y WG +++ + Q +R+ GQ D Sbjct: 1360 GNLVWQARYLTWGATVQEHWQAFDATGRPADAPLAETCDRPQQSFAPMPQNLRMQGQYLD 1419 Query: 276 EESGLYYNRHRYYDPLQGRYITQDPIGLKGGWNFYQYPLNPVQYIDSMGLA-SKYGHLNN 334 E+GL+YN RYYDP G + T DPIGL GG N +QY NP+ +ID G + Y Sbjct: 1420 RETGLHYNTFRYYDPDLGAFTTPDPIGLAGGINLHQYAPNPIAWIDPWGWNRTTYCGKVQ 1479 Query: 335 GGYGARPNKPPTPDPSKLPDIAKQLRLPY 363 + + + K+L P Sbjct: 1480 NKTTTHSTRKRAKEAAAHAHGGKKLPQPK 1508 Score = 65.6 bits (158), Expect = 4e-09, Method: Composition-based stats. Identities = 30/245 (12%), Positives = 58/245 (23%), Gaps = 30/245 (12%) Query: 13 YLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYLY 72 + YD G +TD + L+ + + Y Y Sbjct: 603 TTWVYDDAGNPIAQTDPLGRTQRWRWTPVPAS--------LMQASIGPAGD---AWSYRY 651 Query: 73 DPLGRRVAKRVWRRERDLTGWMS-------LSRKPQVTWYGWDGDRLTTIQNDRTRIQTI 125 D G + + R WD L T D + T Sbjct: 652 DDNGNLLEETDPLGHRTAYANDDRGLPIVITDAHGGRKRLQWDARGLPTAFTDCSGQTTR 711 Query: 126 YQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEIL 185 + A G+ +T+ +L L+ + + D + Sbjct: 712 LSYDHRGHPLEETDALGQTTRTEHDALGRLLRITFPDGASH-------AWRYDAAGQCVQ 764 Query: 186 ADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWC 245 A + + + + + + + + D ALV+ + Sbjct: 765 ARDALGHTTHYSYNPRGQLLGRTRNVGGLASTIHLGY----DAAHRLAALVNENRQ-TYQ 819 Query: 246 AEYDE 250 YD Sbjct: 820 FAYDA 824 Score = 63.3 bits (152), Expect = 2e-08, Method: Composition-based stats. Identities = 39/276 (14%), Positives = 65/276 (23%), Gaps = 46/276 (16%) Query: 7 IARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHY-DSQHRLVHYTRTQYAEPL 65 A Y + YD R T+ TD + Y D+ T TQ L Sbjct: 534 TDDGADYRFDYDLSHRTTQVTDAQGRTRRWCWNGDHEITAYTDALG----ATWTQEYNEL 589 Query: 66 VE-----------SRYLYDPLGR---------RVAKRVWRRERDLTGWMSLSRKPQVTWY 105 + + ++YD G R + W S+ Y Sbjct: 590 RQCLRHVDPLGHATTWVYDDAGNPIAQTDPLGRTQRWRWTPVPASLMQASIGPAGDAWSY 649 Query: 106 GWDGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGG 165 +D + + D +T Y I + A G + Q + + Sbjct: 650 RYDDNGNLLEETDPLGHRTAYANDDRGLPIVITDAHGGRKRLQWDARGLPTAFTDCSGQT 709 Query: 166 S---VVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIH 222 + ++ D L + + + + AR Sbjct: 710 TRLSYDHRGHPLEETDALGQTTRTEHDALGRLLRITFPDGASHAWRYDAAGQCVQAR--- 766 Query: 223 LYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEE 258 D G Y+ G LL Sbjct: 767 ----DALGHTT-----------HYSYNPRGQLLGRT 787 Score = 60.6 bits (145), Expect = 1e-07, Method: Composition-based stats. Identities = 31/258 (12%), Positives = 62/258 (24%), Gaps = 34/258 (13%) Query: 10 DAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESR 69 YD G E+TD + +T R +D+ RL+ T A Sbjct: 707 GQTTRLSYDHRGHPLEETDAL---------GQTTRTEHDALGRLLRITFPDGAS----HA 753 Query: 70 YLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTW----------YGWDGDRLTTIQNDR 119 + YD G+ V R + + T G+D + Sbjct: 754 WRYDAAGQCVQARDALGHTTHYSYNPRGQLLGRTRNVGGLASTIHLGYDAAHRLAALVNE 813 Query: 120 TRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDR 179 R + + + G +R + + + + Sbjct: 814 NRQTYQFAYDAADQQVGETRIDGSRHVLERDTAGQVVGVTEYPMPPGAWDDVPGHAPVQP 873 Query: 180 LESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTE 239 + + + D + + + + P ++ + Sbjct: 874 IHARLERDAAGQLVSKRIFTMKADASADARAHAPAMALQTRLAYRYT-----------PT 922 Query: 240 GATEWCAEYDEWGNLLNE 257 G EY G L+ Sbjct: 923 GELAGAEEYAPDGRRLSR 940 Score = 51.3 bits (121), Expect = 7e-05, Method: Composition-based stats. Identities = 38/252 (15%), Positives = 66/252 (26%), Gaps = 27/252 (10%) Query: 6 RIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPL 65 R A Y Y+ G+L +T + T YD+ HRL E Sbjct: 766 RDALGHTTHYSYNPRGQLLGRTRNVGGLAS------TIHLGYDAAHRLAAL----VNENR 815 Query: 66 VESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWY-----GWDGDRLTTIQNDRT 120 ++ YD ++V + R + + + VT Y WD Sbjct: 816 QTYQFAYDAADQQVGETRIDGSRHVLERDTAGQVVGVTEYPMPPGAWDD---VPGHAPVQ 872 Query: 121 RIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRL 180 I + + L+ + + + + AD + + + Sbjct: 873 PIHARLERDAAGQLV-----SKRIFTMKADASADARAHAPAMALQTRLAYRYTPTGELAG 927 Query: 181 ESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYH----CDHRGLPLALV 236 E D W + + + H D G +A V Sbjct: 928 AEEYAPDGRRLSRHAWHYDRLGQMLREHSDCTIGGHGTDTEHASVVRHAYDALGQRIATV 987 Query: 237 STEGATEWCAEY 248 +G T Y Sbjct: 988 LPDGRTVNYLHY 999 Score = 50.2 bits (118), Expect = 2e-04, Method: Composition-based stats. Identities = 47/291 (16%), Positives = 79/291 (27%), Gaps = 36/291 (12%) Query: 12 HYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYT-------RTQYAEP 64 YRY G L + P+G + H +HYD +++ E Sbjct: 914 RLAYRYTPTGELAGAEEYAPDGRRLSR----HAWHYDRLGQMLREHSDCTIGGHGTDTEH 969 Query: 65 LVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQ-------VTWYGWDGDRLTTIQN 117 R+ YD LG+R+A + Q V+ + DG ++ Sbjct: 970 ASVVRHAYDALGQRIATVLPDGRTVNYLHYGSGHLHQINLDGIVVSDFERDGLHREVLRT 1029 Query: 118 DRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQML 177 G+ T R + + + + P + +L Sbjct: 1030 QGRLASRFAYDGAGRRSATWVRPAVLRMGTARGAGGWSPGDADWMR--RLRHPGLEDTLL 1087 Query: 178 DRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGL------ 231 R + + V EE R A+ E + +H D G Sbjct: 1088 KRYGHDANGELVHEEHSRHGATVRRYDEAGRIVASLAERHPALQEAFHFDPAGNRIGALE 1147 Query: 232 PLALVSTEGATE----------WCAEYDEWGNLLNEENPHQLQQLIRLPGQ 272 AL S +YD +G L+ + + R Q Sbjct: 1148 AQALSSQGRGWVRHNRVKVLQDKRYDYDGFGRLIRKRIGGHTELHFRYDAQ 1198 Score = 44.4 bits (103), Expect = 0.010, Method: Composition-based stats. Identities = 51/337 (15%), Positives = 73/337 (21%), Gaps = 68/337 (20%) Query: 14 LYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYLYD 73 Y + HG L + + R E R+ Y LVH+ + +D Sbjct: 462 RYEH--HGDLQSLQAQLAKVTDRCG-EVVRRFTY-EHGLLVHHRLPAGLNCHYAWQ-RFD 516 Query: 74 PLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYG---------------------WDGDRL 112 R + + W+GD Sbjct: 517 A------DLGHRAGPHWRVVRHWTDDGADYRFDYDLSHRTTQVTDAQGRTRRWCWNGDHE 570 Query: 113 TTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSV----- 167 T D + +R G + + Q+ Sbjct: 571 ITAYTDALGATWTQEYNELRQCLRHVDPLGHATTWVYDDAGNPIAQTDPLGRTQRWRWTP 630 Query: 168 ---------------VFPPVLVQMLDRLESE--------ILADRVSEESRRWLASCGLTV 204 + + LE D A G Sbjct: 631 VPASLMQASIGPAGDAWSYRYDDNGNLLEETDPLGHRTAYANDDRGLPIVITDAHGGRKR 690 Query: 205 EQMQNQMDPVYTPA--RKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQ 262 Q + P + DHRG PL G T E+D G LL P Sbjct: 691 LQWDARGLPTAFTDCSGQTTRLSYDHRGHPLEETDALGQTT-RTEHDALGRLLRITFPDG 749 Query: 263 LQQLIRL--PGQQYDEESGLYYNRHRYYDPL---QGR 294 R GQ L + H Y+P GR Sbjct: 750 ASHAWRYDAAGQCVQARDALGHTTHYSYNPRGQLLGR 786 >UniRef50_C0Q6Q9 Rhs-family protein n=27 Tax=Enterobacteriaceae RepID=C0Q6Q9_SALPC Length = 1593 Score = 216 bits (549), Expect = 2e-54, Method: Composition-based stats. Identities = 95/480 (19%), Positives = 153/480 (31%), Gaps = 36/480 (7%) Query: 2 WPDNRIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQY 61 W R+ YDR GRLT K + + Y Y Q L+ ++ Sbjct: 1108 WSQGRL----DTRRMYDRTGRLTRKLTCKGMRGVVPETFIDREYAYSGQDELLKKRHSRQ 1163 Query: 62 A----------------EPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTW- 104 + YD + +R + G + + Sbjct: 1164 GVTDYFYDMTGRITACRNEAYLDSWQYDAAANLLDRRQGETAQAGAGSVVPFNRITSYRG 1223 Query: 105 --YGWDGDRLTTIQNDRTRIQTIYQPGSFTPLIRV---ETATGELAKTQRRSLADTLQQS 159 Y +D ++ Y+ + L V +T + +++ Sbjct: 1224 LHYRYDEYGRV-VEKWGRNGTQHYRWDAEHRLTEVAVIRGSTVRRYGYVYDAPGRRVEKH 1282 Query: 160 GGEDGGSVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPAR 219 + G + RL E R S ++ S + E + A Sbjct: 1283 ELDAEGKPYNRTTFLWDGMRLAQECRLGRSSSL---YIYSDQGSHEPLARVDRAAPGEAD 1339 Query: 220 KIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEESG 279 ++ YH D G P + G W A Y WGNL +E+ +QQ +R GQ D E+G Sbjct: 1340 EVLYYHTDVNGAPEEMTDGGGNIVWEAGYQVWGNLTHEKETRPVQQNLRFQGQYLDRETG 1399 Query: 280 LYYNRHRYYDPLQGRYITQDPIGLKGGWNFYQYPLNPVQYIDSMGLASKYGHLNNGGYGA 339 L+YN +R+YDP G++I+ DPI L+GG N Y Y NP+ +ID +GL ++ A Sbjct: 1400 LHYNLYRFYDPDIGKFISGDPISLRGGINLYAYAPNPISWIDPLGLRKSCSGFSSADDAA 1459 Query: 340 RPNKPPTPDPSKLPDIAKQLRLPYPIDQASSAPNVFKTFFRALSPYDYTL---YCRKWVK 396 R S + + D + + +P + Sbjct: 1460 RSALSKYNPMSIFKNREYGGIIFRAKDGSYGY-TRGRLGTGRTAPTFKDSAGGLPKGSTP 1518 Query: 397 PNLTCTPQDDSQYPGMDTKTASDYLPQTNWPTTQLPPGYTCAEPYLFPDINKPDGPATAG 456 T D S T A DY + + + Y P G + G Sbjct: 1519 VGQYHTHGDYSDSGFNRTNKAGDYHNSDQFSSKDIFIHNQANGSY--PGYTDALGTPSGG 1576 Score = 84.5 bits (207), Expect = 8e-15, Method: Composition-based stats. Identities = 47/300 (15%), Positives = 79/300 (26%), Gaps = 47/300 (15%) Query: 11 AHYLYRYDRHGRLTEKTDLIPEGVIRTDD------------ERTHRYHYDSQHRLVHYTR 58 +Y YDRHG++ TD + + YD + RL T Sbjct: 789 QRTVYGYDRHGQVVRITDARGGDKYLQWNEDGQLMRHTDCSGSQTAWFYDERTRLERVTD 848 Query: 59 TQYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSR-------KPQVTWYGWDGDR 111 + +RY YD G + + R Q+T + DG Sbjct: 849 AESNS----TRYSYDGNGHLTEVMFADGRTERYQPDAAGRLVKYTSPAGQITRWQRDGQG 904 Query: 112 LTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPP 171 Q D T +T Y+ ++ L + GE + + + D + + G + Sbjct: 905 RVRRQTDATGRRTAYEYDAYGRLTTLTNENGESYRFRYD-VLDRVTEQTDPGGSRRAYGY 963 Query: 172 V----------LVQMLDRLESEILADRVSEES----------RRWLASCGLTVEQMQNQM 211 + + + D + R+ A+ L + + Sbjct: 964 NALNAVTAVIYGGERGGEIRHGLERDAAGRLTAKITPETRTEYRYDAADRLLEIRRRRHD 1023 Query: 212 DPVYTPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRLPG 271 I D G L YD GN + P G Sbjct: 1024 AAEGGEPEVIRFS-YDSAGN--LLSEETAQGVLQHRYDVQGNRTETQMPDGRTLRYLYYG 1080 Score = 82.5 bits (202), Expect = 3e-14, Method: Composition-based stats. Identities = 51/306 (16%), Positives = 85/306 (27%), Gaps = 63/306 (20%) Query: 8 ARDAHYLYRYDRHGRLTEKTDLIPEG-------------VIRTDDERTHRYHYDSQHRLV 54 A+ + Y YDR G LTE D + RY YD + L Sbjct: 722 AQGGKWRYVYDRLGHLTETHDPLGRVEQTQWHPVWHQPETEVDAAGAAWRYEYDERGNLQ 781 Query: 55 HYTRTQYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMS------------------- 95 + + + Y YD G+ V R W Sbjct: 782 AVSDPLH----QRTVYGYDRHGQVVRITDARGGDKYLQWNEDGQLMRHTDCSGSQTAWFY 837 Query: 96 ---------LSRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAK 146 + T Y +DG+ T YQP + L++ + G++ + Sbjct: 838 DERTRLERVTDAESNSTRYSYDGNGHLTEVMFADGRTERYQPDAAGRLVKYTSPAGQITR 897 Query: 147 TQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQ 206 QR +++ G + L L +E + ES R+ Sbjct: 898 WQRDGQG-RVRRQTDATGRRTAYEYDAYGRLTTLTNE------NGESYRFRYD------- 943 Query: 207 MQNQMDPVYTPARKIHLYHCDHRGLPLALV---STEGATEWCAEYDEWGNLLNEENPHQL 263 + +++ P Y + A++ G E D G L + P Sbjct: 944 VLDRVTEQTDPGGSRRAYGYNALNAVTAVIYGGERGGEIRHGLERDAAGRLTAKITPE-T 1002 Query: 264 QQLIRL 269 + R Sbjct: 1003 RTEYRY 1008 Score = 67.9 bits (164), Expect = 9e-10, Method: Composition-based stats. Identities = 46/266 (17%), Positives = 76/266 (28%), Gaps = 39/266 (14%) Query: 8 ARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDE------------RTHRYHYDSQHRLVH 55 A Y+ D GRL + T + D R Y YD+ RL Sbjct: 870 ADGRTERYQPDAAGRLVKYTSPAGQITRWQRDGQGRVRRQTDATGRRTAYEYDAYGRLTT 929 Query: 56 YTRTQYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSR---------KPQVTWYG 106 T R+ YD L R + R G+ +L+ + +G Sbjct: 930 LTNENGES----YRFRYDVLDRVTEQTDPGGSRRAYGYNALNAVTAVIYGGERGGEIRHG 985 Query: 107 ---WDGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGED 163 RLT TR Y+ + L+ + + A+ + S G Sbjct: 986 LERDAAGRLTAKITPETRT--EYRYDAADRLLEIRRRRHDAAEGGEPEVIRFSYDSAGNL 1043 Query: 164 GGSVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHL 223 VL D + + R+L ++Q+ D + Sbjct: 1044 LSEETAQGVLQHRYDVQGNRTETQMPDGRTLRYLYYGSGHLQQINLGRDVISE------- 1096 Query: 224 YHCDHRGLPLALVSTEGATEWCAEYD 249 + DH + ++G + YD Sbjct: 1097 FTRDHLH--REVQWSQGRLDTRRMYD 1120 Score = 61.4 bits (147), Expect = 7e-08, Method: Composition-based stats. Identities = 50/290 (17%), Positives = 67/290 (23%), Gaps = 49/290 (16%) Query: 6 RIARDAHY-----LYRYDRHGRLTEKTDLIPEGVIR-------TDDERT----------- 42 R+ YD HGRL E + IR T Sbjct: 529 RLKMLGDRNSNCQHLTYDNHGRLVEISGDRQRPCIRLHYELAAHPQRVTRIFRHYPEGEP 588 Query: 43 ---HRYHYDSQHRLVHYTRTQYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRK 99 RY YD RL + + YD R ER W Sbjct: 589 ELLRRYRYDEAGRLNGVV---DNAGQYQREFAYDDNDCMTMHREPGGERYYYSWAWFEGP 645 Query: 100 PQVTWYGWDGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQS 159 W T + + Q + V + G + + Sbjct: 646 DDAAW-------RVTGHHTDSGEQYRLDWNLAERSLCVTDSLG-RMRCHWWDAQGLVTAY 697 Query: 160 GGEDGGSVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPAR 219 E G F + L + D + R G E T Sbjct: 698 RDEAGQMTTFRWSDEERLLL----GMTDAQGGKWRYVYDRLGHLTETHDPLGRVEQTQWH 753 Query: 220 KIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRL 269 + P V GA W EYDE GNL +P + + Sbjct: 754 PVWHQ-------PETEVDAAGA-AWRYEYDERGNLQAVSDPLHQRTVYGY 795 Score = 59.8 bits (143), Expect = 2e-07, Method: Composition-based stats. Identities = 43/274 (15%), Positives = 71/274 (25%), Gaps = 34/274 (12%) Query: 7 IARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLV 66 I + YRYD RL E + + R+ YDS L+ Q Sbjct: 998 ITPETRTEYRYDAADRLLEIRRRRHDAAEG-GEPEVIRFSYDSAGNLLSEETAQG----- 1051 Query: 67 ESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVT-------WYGWDGDRLTTIQNDR 119 ++ YD G R ++ + Q+ + D +Q + Sbjct: 1052 VLQHRYDVQGNRTETQMPDGRTLRYLYYGSGHLQQINLGRDVISEFTRD-HLHREVQWSQ 1110 Query: 120 TRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQML-D 178 R+ T L R T G + SG ++ V Sbjct: 1111 GRLDTRRMYDRTGRLTRKLTCKGMRGVVPETFIDREYAYSGQDELLKKRHSRQGVTDYFY 1170 Query: 179 RLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPL---AL 235 + I A R W + + G + + Sbjct: 1171 DMTGRITACRNEAYLDSWQYDAAANLLDRRQGETAQAGA------------GSVVPFNRI 1218 Query: 236 VSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRL 269 S G YDE+G ++ + + Q R Sbjct: 1219 TSYRGL---HYRYDEYGRVVEKWGRNGT-QHYRW 1248 Score = 56.4 bits (134), Expect = 2e-06, Method: Composition-based stats. Identities = 45/288 (15%), Positives = 69/288 (23%), Gaps = 57/288 (19%) Query: 13 YLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLV------------------ 54 YRYD GRL GV+ + + YD + Sbjct: 592 RRYRYDEAGRL--------NGVVDNAGQYQREFAYDDNDCMTMHREPGGERYYYSWAWFE 643 Query: 55 ----HYTRTQYAEPLVESRYLYD------------PLGRRVAKRVWRRERDLTGWMSLSR 98 R +Y D LGR R + Sbjct: 644 GPDDAAWRVTGHHTDSGEQYRLDWNLAERSLCVTDSLGR---MRCHWWDAQGLVTAYRDE 700 Query: 99 KPQVTWYGW-DGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQ 157 Q+T + W D +RL D + Y L G + +TQ + + Sbjct: 701 AGQMTTFRWSDEERLLLGMTDAQGGKWRYVYDRLGHLTETHDPLGRVEQTQWHPVWHQPE 760 Query: 158 QSGGEDGGSVVFPPVLVQMLD------RLESEILADRVSEESRRWLASCGLTVEQMQNQM 211 G + + L + DR + R A G Q Sbjct: 761 TEVDAAGAAWRYEYDERGNLQAVSDPLHQRTVYGYDRHGQVVRITDARGGDKYLQWNEDG 820 Query: 212 DPVYTPA---RKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLN 256 + + + D R + E + YD G+L Sbjct: 821 QLMRHTDCSGSQTAWF-YDERTRLERVTDAESNST-RYSYDGNGHLTE 866 >UniRef50_A9FZA9 Rhs family protein n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=A9FZA9_SORC5 Length = 2407 Score = 215 bits (547), Expect = 3e-54, Method: Composition-based stats. Identities = 82/509 (16%), Positives = 140/509 (27%), Gaps = 64/509 (12%) Query: 8 ARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDD--ERTHRYHYDSQHRLVHYTRTQYAEP- 64 A + Y YD G + E D + V + + +Y YD+ +RL+ T ++A Sbjct: 1738 AVLQNLTYVYDPVGNIVEIGDSAQQTVFFNNAVVSPSAQYVYDAVYRLIEATGREHAGGL 1797 Query: 65 -------------------------LVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRK 99 +Y+YD +G T W + + Sbjct: 1798 SDAPRDQNDLPIQSLPHANDAQALRNYTEQYVYDAVGNLRRMVHQAGTGSWTRWYAYEQT 1857 Query: 100 PQVTWYGWDGDRLTTIQNDRTRIQTIY------------------QPGSFTPLIRVETAT 141 +RLT+ D + + Sbjct: 1858 AN--------NRLTSTTGDPANGPFRNYAHDAHGNMTSMPHITALTWDENDQVRSTDLDG 1909 Query: 142 GELAKTQRRSLADTLQQSGGEDG--GSVVFPPVLVQMLDRLESEILADRVSEESRRWLAS 199 G + +++ +G ++ R S ++ +R + A Sbjct: 1910 GGDVYYDYDAAGQRVRKVWEHNGLVDERIYLGGYEVYRRRNSSGLVLERQTLHVMD-GAR 1968 Query: 200 CGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLL---N 256 VE +T + +H G V G EY +G Sbjct: 1969 RVAMVETKTVDTSGPFTVTPRARYQLDNHLGSASLEVDGAGLVIGYEEYHPFGTTAYWSA 2028 Query: 257 EENPHQLQQLIRLPGQQYDEESGLYYNRHRYYDPLQGRYITQDPIGLKGGWNFYQYP-LN 315 Q+ R G + DEE+GLYY+ RYY P GR+ + DP G G N Y+Y N Sbjct: 2029 ASGIEVSQRRYRYTGTEKDEETGLYYHGARYYAPWLGRWTSADPAGFVDGPNLYEYVRGN 2088 Query: 316 PVQYIDSMGLASKYGHLNNGGYGARPNKPPTPDPSKLPDIAKQLRLPYPIDQASSAPNVF 375 P++ D G S + P + + + + Sbjct: 2089 PIRLRDPSGRESTDQRIAQMTDVQLHRHVKALSPEARAEFTASATGKFQERVSVTLARGK 2148 Query: 376 KTFFRALSPYDYTLYCRKWVKPNLTCTPQDDSQYPGMDTKTASDYLPQTNWPTTQLPPGY 435 R + + +P + P PG +LP Sbjct: 2149 LESIRTGVTTVEHVRPQPPAEPTHSIAPGRSDPLPGSVYVAPGGIDRSA---ADRLPDPV 2205 Query: 436 TCAEPYLFPDINKPDGPATAGIDDLGEIL 464 T A + N G + G ++ Sbjct: 2206 TRAVYKYLTEENPTAGKVVEALQIAGALV 2234 Score = 51.0 bits (120), Expect = 1e-04, Method: Composition-based stats. Identities = 46/270 (17%), Positives = 73/270 (27%), Gaps = 33/270 (12%) Query: 23 LTEKTDLIPEGVIRTDDERTHRY----HYDSQHRLVHYTRTQYAEPLVESRY--LYDPLG 76 LT TD+ T + YD+ +R T S Y+ G Sbjct: 1615 LTPLTDVSAIATAAEPLLETESFGTQTAYDALNRPTSLTAPDGLTASDASEVKPTYNEAG 1674 Query: 77 --RRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQPGSFTPL 134 RV R+ T ++ Y G R + T Y P +F L Sbjct: 1675 LLERVEARIRGAVAWTTFVDNID-------YDAKGQRERIEYGNGTSTAYTYDPLTF-RL 1726 Query: 135 IRVETATGELAK-----TQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILA--- 186 R++T + T + + G +V F +V + + + Sbjct: 1727 SRLKTTRSSDSAVLQNLTYVYDPVGNIVEIGDSAQQTVFFNNAVVSPSAQYVYDAVYRLI 1786 Query: 187 DRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIH----LYHCDHRGLPLALVSTEGAT 242 + E L+ + Q P A+ + Y D G +V G Sbjct: 1787 EATGREHAGGLSDAPRDQNDLPIQSLPHANDAQALRNYTEQYVYDAVGNLRRMVHQAGTG 1846 Query: 243 EWCAEYDEW----GNLLNEENPHQLQQLIR 268 W Y + N L R Sbjct: 1847 SWTRWY-AYEQTANNRLTSTTGDPANGPFR 1875 Score = 47.9 bits (112), Expect = 9e-04, Method: Composition-based stats. Identities = 37/271 (13%), Positives = 70/271 (25%), Gaps = 34/271 (12%) Query: 6 RIARDAHYLYR--YDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQH------RLVHYT 57 R ++YR YD R T + + G R RY Y H L Sbjct: 1519 RTWNARGFVYRSSYDGLRRPTHEHVQLGVGSERLA----RRYVYGEAHPHATAMNLRGRA 1574 Query: 58 RTQYAEPLVESRYLYDPLGRRV--AKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTI 115 Y V + YD G + ++R+ W L+ V+ + L Sbjct: 1575 YQVYDGAGVVTSLEYDFKGNLLQASRRLRSDVHADADWAVLTPLTDVSAIATAAEPLLET 1634 Query: 116 QNDRTRIQTIYQPGSFTPLIRVETATGELAKTQ-----RRSLADTLQQSGGEDGGSVVFP 170 ++ T+ + + G A + A L++ G+V + Sbjct: 1635 ESFGTQT----AYDALNRPTSLTAPDGLTASDASEVKPTYNEAGLLERVEARIRGAVAWT 1690 Query: 171 PVLVQMLDRLESEILADRVSEESRR-WLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHR 229 + + + + + + + + Y D Sbjct: 1691 TFVDNIDYDAKGQRERIEYGNGTSTAYTYDPLTFRLSRLKTTRSSDSAVLQNLTYVYDPV 1750 Query: 230 GLPLALVSTEGATE----------WCAEYDE 250 G + + + T YD Sbjct: 1751 GNIVEIGDSAQQTVFFNNAVVSPSAQYVYDA 1781 >UniRef50_C9Y441 Putative uncharacterized protein n=1 Tax=Cronobacter turicensis RepID=C9Y441_CROTZ Length = 1394 Score = 215 bits (546), Expect = 4e-54, Method: Composition-based stats. Identities = 87/400 (21%), Positives = 132/400 (33%), Gaps = 36/400 (9%) Query: 6 RIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPL 65 R YDR GRLT + + + R+ YD ++ L+ R Sbjct: 911 RTQGLLTSRSEYDRLGRLTRRDVFTGDAQRPAPRRWSRRWDYDYRNNLIREERDDNPFSW 970 Query: 66 VESRYLYDPLGRRVAK-----RVWRRERDLTGWMSLSRKPQVTWYG---------WDGD- 110 R+ YD GR + + + + D G Q + W D Sbjct: 971 Y--RWKYDSAGRLLTQDGTLPGQEQWQWDAAGNPLDDSATQTVRFNRVTQLNGIQWRYDI 1028 Query: 111 RLTTIQNDRTRIQTIYQPGSFTPLIRVETATGEL------AKTQRRSLADTLQQSG---- 160 T++ D + + Y+ L V + + + L + ++ Sbjct: 1029 HGRTVEKDNGQTRWRYRYDGEHRLTDVISQPRDRNKPQVEVSFRYDPLGRRISKTRRQFL 1088 Query: 161 GEDGGSVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARK 220 V RL EI + ++ S + E + T A Sbjct: 1089 AGQPTGKAVTTRFVWEGFRLLQEIHDEVP----LTYVYSDPHSYEPLARIDG---TQAPD 1141 Query: 221 IHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENP--HQLQQLIRLPGQQYDEES 278 I+ +H G P L EG W WG L +E P Q +R+ GQ D E+ Sbjct: 1142 IYWFHNQPNGTPERLTDVEGRVRWEGRNSAWGKLAHESTPLPTGYNQNLRMQGQYLDRET 1201 Query: 279 GLYYNRHRYYDPLQGRYITQDPIGLKGGWNFYQYPLNPVQYIDSMGLASKYGHLNNGGYG 338 GL+YN RYYDP GR+ DPIGL GG N YQ+ N + ++D GL + G Sbjct: 1202 GLHYNLFRYYDPDCGRFTQHDPIGLAGGINLYQFAPNALGWVDPWGLNKTTFYHAGDIQG 1261 Query: 339 ARPNKPPTPDPSKLPDIAKQLRLPYPIDQASSAPNVFKTF 378 P + QA+ N+ Sbjct: 1262 DIDPSKGRVGLDFNPANHGGFYVTTDRAQATEWANMRNHP 1301 Score = 89.1 bits (219), Expect = 3e-16, Method: Composition-based stats. Identities = 51/226 (22%), Positives = 76/226 (33%), Gaps = 28/226 (12%) Query: 5 NRIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHY--TRTQYA 62 NR+ + +RYD HGR EK + + RY YD +HRL Sbjct: 1014 NRVTQLNGIQWRYDIHGRTVEK----------DNGQTRWRYRYDGEHRLTDVISQPRDRN 1063 Query: 63 EPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRI 122 +P VE + YDPLGRR++K + + K T + W+G RL +D + Sbjct: 1064 KPQVEVSFRYDPLGRRISKTRRQ-----FLAGQPTGKAVTTRFVWEGFRLLQEIHDEVPL 1118 Query: 123 QTIY-QPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLE 181 +Y P S+ PL R++ T ++ +G E Sbjct: 1119 TYVYSDPHSYEPLARIDGTQAPDIYWFHNQPNGTPERLTDVEGRVRWEGRNSAWGKLAHE 1178 Query: 182 SEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCD 227 S L ++ R Q Q Y D Sbjct: 1179 STPLPTGYNQNLRM----------QGQYLDRETGLHYNLFRYYDPD 1214 Score = 79.1 bits (193), Expect = 3e-13, Method: Composition-based stats. Identities = 40/282 (14%), Positives = 73/282 (25%), Gaps = 45/282 (15%) Query: 10 DAHYLYRYDRHGRLTEKTDLIPEGVIRT------------DDERTHRYHYDSQHRLVHYT 57 Y+ G++ TD D RYHYD+ R + Sbjct: 609 GNSRHQEYNDAGQVIRATDCSGRVTRYRYHPLGWLSTAISADGEETRYHYDAAGRPIQLE 668 Query: 58 RTQY-----------------AEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKP 100 R + S + YD GR V+ + + K Sbjct: 669 RPEGWEERLLWNARGLPEAHEGADGKRSEFTYDAAGRLVS--------------TSNPKG 714 Query: 101 QVTWYGWDGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSG 160 + WD + ++ G+ + L+ E+ G + + + T+ ++ Sbjct: 715 ETVRRRWDSRGRLIELENEKGEAYQFRWGADSRLLEEESLDGVITRYGYDACGRTIARTF 774 Query: 161 GEDGGSVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARK 220 + +L S + + A + Sbjct: 775 AAGHPEAITHTFAWSAAGQLLSRTTPEGQIRYDYTPAGLISRIALHASLAENVWSREAEQ 834 Query: 221 IHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQ 262 + D G + S GA W YD GN + + P Sbjct: 835 ELRFEYDALGRVIGEQSENGALGW--TYDALGNRTSVQLPDG 874 Score = 77.2 bits (188), Expect = 1e-12, Method: Composition-based stats. Identities = 48/312 (15%), Positives = 85/312 (27%), Gaps = 45/312 (14%) Query: 6 RIARDAHYLYRYDRHGRLTEK--TDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAE 63 R + Y Y G ++ + E V + E+ R+ YD+ R++ A Sbjct: 797 RTTPEGQIRYDYTPAGLISRIALHASLAENVWSREAEQELRFEYDALGRVIGEQSENGAL 856 Query: 64 PLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQ-------VTWYGWDGDRLTTIQ 116 + YD LG R + ++ + VT + D + + Sbjct: 857 G-----WTYDALGNRTSVQLPDGRMLKNHFYGSGHLLSIALDNLPVTDFTRD-ELHRELS 910 Query: 117 NDRTRIQTIYQPGSFTPLIRVETATGE-------LAKTQRRSLADTLQQSGGEDGGSVVF 169 + + + + L R + TG+ + D + Sbjct: 911 RTQGLLTSRSEYDRLGRLTRRDVFTGDAQRPAPRRWSRRWDYDYRNNLIREERDDNPFSW 970 Query: 170 PPVLVQMLDRLESEILADRVSEESRRWLASCG---LTVEQMQNQMDPVYTPARKIHLYHC 226 RL ++ +E +W A+ + Q + Sbjct: 971 YRWKYDSAGRLLTQ-DGTLPGQEQWQWDAAGNPLDDSATQTVRFNRVTQLNGIQWRY--- 1026 Query: 227 DHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEESGLYYNRHR 286 D G + G T W YD G + Q D R Sbjct: 1027 DIHGRTVEK--DNGQTRWRYRYD--GEHRLTDVIS----------QPRDRNKPQVEVSFR 1072 Query: 287 YYDPLQGRYITQ 298 YDP GR I++ Sbjct: 1073 -YDP-LGRRISK 1082 Score = 76.0 bits (185), Expect = 3e-12, Method: Composition-based stats. Identities = 60/439 (13%), Positives = 104/439 (23%), Gaps = 75/439 (17%) Query: 13 YLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYL- 71 YRYD G+LT TD T Y Y+ + E R+ Sbjct: 398 VTYRYDGRGQLTAVTDATGIT--------TREYRYNDAG--LMIWHRLPGGLESEYRWEK 447 Query: 72 YD---PLGRRVAKRVW---RRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTI 125 +D + R + + Q + W+ L T D Sbjct: 448 FDHWRVVENRTSTGDGCRIAYDLTAGLTTVTQYDGQTRQHYWNKQGLITRFVDERGETWR 507 Query: 126 YQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEIL 185 Y+ L R G + + +Q+ E + R + Sbjct: 508 YEWNEHDLLTRRIDPLGNATTFVYDDMGNRVQEVDAEGNIR-----ATQWLEHRALPAAI 562 Query: 186 ADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWC 245 + +R + + ++ + + L D G + V G + Sbjct: 563 TEADGTATRFYYDE--------HHGLERIVDALGQTTLLRRDECGQIVEEVDAAGNSRHQ 614 Query: 246 AEYDEWGNLLNEENPHQLQQLIRLPGQQYDEESGLYYNRHRYYDPLQGRYITQDPIGLKG 305 D G ++ + R Y P G +++ I G Sbjct: 615 EYNDA-GQVIRATDCSGRVTRYR-------------------YHP-LG-WLST-AISADG 651 Query: 306 GWNFYQY--PLNPVQYIDSMGLASKYGHLNNGGYGARPNKPPTPDPSKLPDIAKQLRLPY 363 Y Y P+Q G + N G D A +L Sbjct: 652 EETRYHYDAAGRPIQLERPEG-WEERLLWNARGLPEAHEGADGKRSEFTYDAAGRLVSTS 710 Query: 364 PIDQASSAPNVFKTFFRALSPYDYTLYCRKWVKPNLTCTPQDDSQYPGMDTKTASDYLPQ 423 +P T+ R + L + + S L + Sbjct: 711 -------------------NPKGETVRRRWDSRGRLIELENEKGEAYQFRWGADSRLLEE 751 Query: 424 TNWPTTQLPPGYTCAEPYL 442 + GY + Sbjct: 752 ESLDGVITRYGYDACGRTI 770 >UniRef50_Q6LUC6 Hypothetical nucleotidyltransferase n=1 Tax=Photobacterium profundum RepID=Q6LUC6_PHOPR Length = 1352 Score = 214 bits (545), Expect = 6e-54, Method: Composition-based stats. Identities = 84/437 (19%), Positives = 146/437 (33%), Gaps = 44/437 (10%) Query: 12 HYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYL 71 Y YD +L D ++ YD+ ++L ++ + + Y Sbjct: 883 RRQYHYDSASQLIAIQDNALGR---------QQFSYDALNQL-----QEHHQNNTTTNYQ 928 Query: 72 YDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQPGSF 131 +D G + E + T + ++ Y G++ T D + + F Sbjct: 929 FDSFGNPSLGNLDFEECESTNDRLQRYQSKLFDYDKCGNQSTVRDEDSAQHRQF---NGF 985 Query: 132 TPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSE 191 L ++ + G + +L ++ + + D+L E Sbjct: 986 NQLTQL-SHNGRYSHYDYDALGRRSRK------TTEQHTVDFLWDGDQLIGEHCQG---- 1034 Query: 192 ESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEW 251 RW + ++ YH DH G P + +EG W A Y+ Sbjct: 1035 -QYRWYIYAPNDFTPLA------LIDNGALYFYHTDHIGTPHTVTDSEGEVVWQATYNAL 1087 Query: 252 GNLLNEENPHQLQQLIRLPGQQYDEESGLYYNRHRYYDPLQGRYITQDPIGLKGGWNFYQ 311 G + + +R GQ +D+ESGL+YNR RYYDP G++I QDPIGL GG N Y+ Sbjct: 1088 GCAAI--SIDIIHNPLRFQGQYHDQESGLHYNRFRYYDPSIGQFIHQDPIGLLGGINHYR 1145 Query: 312 YPLNPVQYIDSMGLASKYGHLNNGGYGARPNKPPTPDPSKLPDIAKQLRLPYPIDQASSA 371 Y NP+Q++D +GL+ K + D + + ++ + Sbjct: 1146 YAPNPIQWVDPLGLSCKEAAFEKIKQSFVNHILADFDLCRGGGRVPVNFGGWSNEEVTGI 1205 Query: 372 PNVFKTFFRALSPYD---YTLYCRKWVKPNLTCTPQDDS----QYPGMDTKTASDYLPQT 424 P+ + D T+ W S PG T Sbjct: 1206 PSALFNNIGSEKYTDILYKTVGESSWNVSGFKNWKFSPSPLAGGVPGSFTDARGAPAAGV 1265 Query: 425 NWPTTQLPPGYTCAEPY 441 + ++ E Sbjct: 1266 DLVGEAYWYEFSEREVQ 1282 Score = 73.7 bits (179), Expect = 1e-11, Method: Composition-based stats. Identities = 43/293 (14%), Positives = 70/293 (23%), Gaps = 50/293 (17%) Query: 6 RIARDAHYLYRYDRHGRLTEKTDLIPE-----------GVIRTDDERTHRYHYD------ 48 R Y YD GRL + + + RY YD Sbjct: 531 RHPEGNKDHYEYDHQGRLIKHLAAGGQCYGYWWNAEGLLTAFKQNHAVTRYSYDVYGEIN 590 Query: 49 ---------------SQHRL--VHYTRTQYAEPLVESRYLYDPLGRRVAKRVWRRERDLT 91 S + + + P VE Y YD GR ++ Sbjct: 591 GLANPDGSIIEYQRDSAGNIAQTRHYHPDHETPAVEQSYTYDDAGRLISHTDPIGRMSQI 650 Query: 92 GWMSLSR-------KPQVTWYGWDGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGEL 144 W LS+ Y +D +R T + + + R G Sbjct: 651 VWGGLSQPETIIQPDGSYVAYQYDQERNLTGITRSDGCHYQLEWDAEERVSRTIGFDGRD 710 Query: 145 AKTQRRS--------LADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSEESRRW 196 + D + G V+ + + R D + Sbjct: 711 QHYAYDANSQLMTVREGDRTVHLVRDTAGRVIEKQTVAESGTRDSQLYDYDVIGRLLNAN 770 Query: 197 LASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWCAEYD 249 + L E ++ Y D +G L+ +G +YD Sbjct: 771 TTARKLRFEWQGSKQLNTTWQDAWQLQYEYDQQGNRTQLILPDGLRLG-YQYD 822 Score = 68.3 bits (165), Expect = 7e-10, Method: Composition-based stats. Identities = 53/339 (15%), Positives = 93/339 (27%), Gaps = 65/339 (19%) Query: 16 RYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYLYDPL 75 RYD G L T +P + YHY++ +LV T RY Y Sbjct: 320 RYDASGHLV--TVEMPSKEDDSIVNVIASYHYNADGQLVAATNRN----KQTERYQYRDD 373 Query: 76 GRRVAKRVWRRERDLTGWMSLSRKPQ-----------VTWYGWDGDRLTTIQNDRTRIQT 124 ++ W+ + + +D +TI D Q Sbjct: 374 HLLTCRQRASGFSHYFEWLGSGSTAKCRAQWGDNHCYQYQFDYDNSASSTISTDSRGHQW 433 Query: 125 IYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSG-GEDGGSVVFPPVL----VQMLDR 179 Y L++ + G + + L + + + Sbjct: 434 HYYHNEQGLLVKKISPAGAAWRYEYNQLGLKVAGIDPNGSITRYDYNAQGLLCALHAPSG 493 Query: 180 LESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYT--PARKIHLYHCDHRGLPLALVS 237 + +R + + + A +T + + + T P Y DH+G + ++ Sbjct: 494 AITRYCYNRFGQLTEQCSALGHITTHRFNSLGLLLETRHPEGNKDHYEYDHQGRLIKHLA 553 Query: 238 TEGA-------------------TEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEES 278 G YD +G + NP +Y +S Sbjct: 554 AGGQCYGYWWNAEGLLTAFKQNHAVTRYSYDVYGEINGLANPDGSII-------EYQRDS 606 Query: 279 GLYYNRHRYYDPLQ--------------GRYIT-QDPIG 302 + R+Y P GR I+ DPIG Sbjct: 607 AGNIAQTRHYHPDHETPAVEQSYTYDDAGRLISHTDPIG 645 >UniRef50_A9C0N8 YD repeat protein n=5 Tax=cellular organisms RepID=A9C0N8_DELAS Length = 1528 Score = 214 bits (544), Expect = 6e-54, Method: Composition-based stats. Identities = 115/357 (32%), Positives = 157/357 (43%), Gaps = 49/357 (13%) Query: 2 WPDNRIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQY 61 W DNRI ++RYD G + D + HYD H+L+ +Q Sbjct: 1038 WEDNRIGFTEDRVWRYDPCGNRIAQMQA---------DHSQQQLHYDGAHQLIAVRSSQI 1088 Query: 62 AEPLVE----SRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQN 117 + SRY YD LGRR+ ++V + + T + +YGWDGDRL + Sbjct: 1089 QGNAEQLRHHSRYTYDALGRRLKQQVESADGNPT---------RTHYYGWDGDRLIHTER 1139 Query: 118 DRTR------IQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSV---- 167 + TIY+PGSFTPL+R+ T + + L + + Sbjct: 1140 QQHGDDTRHIEHTIYEPGSFTPLVRLSTTASGDPQNEPHLLVQAIAAGLPDQDDPNHRPA 1199 Query: 168 ---------VFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPA 218 P + Q R L + ++ L + ++ + M Sbjct: 1200 LALMQTMLSAMPRDMQQDAARHLRHTLEHGLPPGAQAMLGEQAESTARLLSGMQAKLQEQ 1259 Query: 219 RK-------IHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRLPG 271 K IH YHCDH G P+AL G W A+ D WGN+L E NP + Q IRLPG Sbjct: 1260 EKEQHARIAIHHYHCDHLGTPMALTDQTGQVAWAAKLDPWGNVLQEYNPQGIHQAIRLPG 1319 Query: 272 QQYDEESGLYYNRHRYYDPLQGRYITQDPIGLKGGWNFYQYP-LNPVQYIDSMGLAS 327 Q +D E+GLYYNRHRYYDP+ G Y+ QDPIGL GG N Y +P ID GL + Sbjct: 1320 QHHDRETGLYYNRHRYYDPVVGSYVNQDPIGLAGGVNKILYSESSPTSKIDPTGLNT 1376 Score = 78.3 bits (191), Expect = 6e-13, Method: Composition-based stats. Identities = 44/270 (16%), Positives = 71/270 (26%), Gaps = 53/270 (19%) Query: 3 PDNRIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYA 62 I + Y YD G+L G + RY YDS RL T +Q+ Sbjct: 918 AHALIGQILGRRYHYDSLGQLVAIEQAGAPG----QAAQLLRYGYDSAGRLRAATDSQH- 972 Query: 63 EPLVESRYLYDPLGRRV-AKRVWRRERDLTGWMSLSRK---------------------- 99 P +R+ DP G R+ A + + + Sbjct: 973 -PQTTTRWQLDPAGNRLPAPGAPGATGQTNTQDNWAAQVHAHWRHTDFNLMGLGHLAGQR 1031 Query: 100 ----------------PQVTWYGWDGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGE 143 +V Y G+R+ +Q D ++ Q Y +R G Sbjct: 1032 QGPVQRWEDNRIGFTEDRVWRYDPCGNRIAQMQADHSQQQLHYDGAHQLIAVRSSQIQGN 1091 Query: 144 LAK------TQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSE--ESRR 195 + +L L+Q G+ DRL + Sbjct: 1092 AEQLRHHSRYTYDALGRRLKQQVESADGNPTRTHYYGWDGDRLIHTERQQHGDDTRHIEH 1151 Query: 196 WLASCGLTVEQMQNQMDPVYTPARKIHLYH 225 + G ++ P + HL Sbjct: 1152 TIYEPGSFTPLVRLSTTASGDPQNEPHLLV 1181 Score = 69.8 bits (169), Expect = 2e-10, Method: Composition-based stats. Identities = 40/262 (15%), Positives = 65/262 (24%), Gaps = 40/262 (15%) Query: 16 RYDRHGRLTEKTDLIPEGVIRTDDERT--------HRYHYDSQHRLVHYTRTQYAEPLVE 67 ++D GRLT + + TD + RYHYDS +LV + + Sbjct: 893 QWDSLGRLTALGTTGLQALQPTDAQAHALIGQILGRRYHYDSLGQLVAIEQAGAPGQAAQ 952 Query: 68 S-RYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTIY 126 RY YD GR A + + T G+RL QT Sbjct: 953 LLRYGYDSAGRLRAATDSQHPQTTT----------RWQLDPAGNRLPAPGAPGATGQTNT 1002 Query: 127 QPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILA 186 Q + T + + F V D + I Sbjct: 1003 QDNWAAQVHAHWRHTDFNLMGLGHLAGQRQGPVQRWEDNRIGFTEDRVWRYDPCGNRIAQ 1062 Query: 187 DRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWCA 246 + ++ + +++ + H Sbjct: 1063 MQADHSQQQLHYDGAHQLIAVRSSQIQGNAEQLRHH---------------------SRY 1101 Query: 247 EYDEWGNLLNEENPHQLQQLIR 268 YD G L ++ R Sbjct: 1102 TYDALGRRLKQQVESADGNPTR 1123 Score = 67.9 bits (164), Expect = 7e-10, Method: Composition-based stats. Identities = 34/210 (16%), Positives = 61/210 (29%), Gaps = 27/210 (12%) Query: 12 HYLYRYDRHGRLTEKTDLIPE------------GVIRTDDERTHRYHYDSQHRLVHYTRT 59 Y YDR G L E + + + + + RYHYDS L Sbjct: 558 STHYHYDRWGALIEVDNALGQRQRHQRDGQGRIVASELPNGQIERYHYDSAGHLTRIDPA 617 Query: 60 QYAEPLVES-------RYLYDPLGRRVAKRVWRRERDLTGWMS------LSRKPQVTWYG 106 Q A E+ YD GR V + + ++ + + Sbjct: 618 QPAGTSSETQTADPSIHLRYDLWGRLVQRTHGGLTLAFEYDSAGRLLRLVNENGSQSRFA 677 Query: 107 WDG-DRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGG 165 WD DRL + R+Q Y+ + L+ + + + + + Sbjct: 678 WDALDRLVQEEGFDQRLQ-RYRWDAAGQLMEATDGNAAQQSSSHYRWDEGGRLAERQLPA 736 Query: 166 SVVFPPVLVQMLDRLESEILADRVSEESRR 195 + P + + A V + + Sbjct: 737 TPHAPAQTHRYEWDAAGRLTAASVWQHTGE 766 Score = 64.8 bits (156), Expect = 7e-09, Method: Composition-based stats. Identities = 49/291 (16%), Positives = 75/291 (25%), Gaps = 40/291 (13%) Query: 14 LYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAE-PLVESRYLY 72 YR+D G+L E TD + + Y +D RL P RY + Sbjct: 696 RYRWDAAGQLMEATDG------NAAQQSSSHYRWDEGGRLAERQLPATPHAPAQTHRYEW 749 Query: 73 DPLGRRVAKRVWRRERDLTGWMSLSRKP-----------------QVTWYGWDGDRLTTI 115 D GR A VW+ + T ++ R+ Q+ G DG+ Sbjct: 750 DAAGRLTAASVWQHTGENTAENTIQRQSRIALERDALGRITAEVQQLYRPGKDGNVGGGA 809 Query: 116 QNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLAD----TLQQSGGEDGGSVVFPP 171 + + + L + D Sbjct: 810 DQIEYEHRIAHTLDRLGGRQHSQLQGLGEIAWLTYGSGHVHGLQLNGASLIDFERDNLHR 869 Query: 172 VLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKI--------HL 223 + + L A + R+W + LT T A+ Sbjct: 870 EVRRSLHPPTPAADAHHPLQVQRQWDSLGRLTALGTTGLQALQPTDAQAHALIGQILGRR 929 Query: 224 YHCDHRGLPLAL--VSTEGATEW--CAEYDEWGNLLNEENPHQLQQLIRLP 270 YH D G +A+ G YD G L + Q R Sbjct: 930 YHYDSLGQLVAIEQAGAPGQAAQLLRYGYDSAGRLRAATDSQHPQTTTRWQ 980 Score = 60.6 bits (145), Expect = 1e-07, Method: Composition-based stats. Identities = 42/292 (14%), Positives = 69/292 (23%), Gaps = 72/292 (24%) Query: 5 NRIARDAHYL-----YRYDRHGRLTEKTDLIPEG-------------------------- 33 R+ + Y+YD GRLT+ T Sbjct: 476 GRLLQSTDTAGATTGYQYDAWGRLTQITQADGSTERYHYPDPQEAPLTCDSPRRIEDAQG 535 Query: 34 --------------VIRTDDERTHRYHYDSQHRLVHYTRTQYAE---------------- 63 + YHYD L+ Sbjct: 536 GSKQLAWSDAGQLLSYTDCSGHSTHYHYDRWGALIEVDNALGQRQRHQRDGQGRIVASEL 595 Query: 64 -PLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRI 122 RY YD G + + + + Y G +Q + Sbjct: 596 PNGQIERYHYDSAGHLT-RIDPAQPAGTSSETQTADPSIHLRYDLWG---RLVQRTHGGL 651 Query: 123 QTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLES 182 ++ S L+R+ G ++ +L D L Q G D + +L Sbjct: 652 TLAFEYDSAGRLLRLVNENGSQSRFAWDAL-DRLVQEEGFDQRLQRYRWDA---AGQLME 707 Query: 183 EILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLA 234 + + S + G + + Q P + H Y D G A Sbjct: 708 ATDGNAAQQSSSHYRWDEGGRLAERQLPATPHAPA--QTHRYEWDAAGRLTA 757 Score = 50.2 bits (118), Expect = 2e-04, Method: Composition-based stats. Identities = 54/330 (16%), Positives = 84/330 (25%), Gaps = 49/330 (14%) Query: 13 YLYRYDRHGRLTEKTDLIPE------------GVIRTDDERTHRYHYDSQH---RLVHYT 57 Y Y G L D + R HRY Y+S R++ ++ Sbjct: 306 VRYGYSSAGDLITVHDRAGQLVREFEWDHHRISAHRHASGPWHRYRYESAQPGARVIEHS 365 Query: 58 RTQYAEPLVESRYLY------------------DPLGRRVAKRVWRRERDLTGWMSLSRK 99 + R+ Y D L R Sbjct: 366 NQEGLS----YRFDYLAQPPGPDGQPRAATRVSDSLDRIETYYFEGAAGLSRLIAHHKAD 421 Query: 100 PQVTWYGWDGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQS 159 +D + D + LI V+ G + + L QS Sbjct: 422 GSRWLQAYDSFGRLASRTDPLGRSVHLRRDGQGRLIGVQLPDGRSTQQEHDEATGRLLQS 481 Query: 160 GGEDGGSVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPAR 219 G + + RL AD +E +++ ++ Sbjct: 482 TDTAGATTGYQYDA---WGRLTQITQADGSTERYHYPDPQEAPLTCDSPRRIEDAQGGSK 538 Query: 220 KIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEESG 279 ++ L+ G + YD WG L+ +N +Q + GQ S Sbjct: 539 QLAWSDAGQL---LSYTDCSGHST-HYHYDRWGALIEVDNALGQRQRHQRDGQGRIVASE 594 Query: 280 LYYNRH--RY-YDPLQGRYITQDPIGLKGG 306 L N RY YD G DP G Sbjct: 595 LP-NGQIERYHYD-SAGHLTRIDPAQPAGT 622 >UniRef50_C8Q7Z5 YD repeat protein n=8 Tax=Enterobacteriaceae RepID=C8Q7Z5_9ENTR Length = 1507 Score = 214 bits (544), Expect = 7e-54, Method: Composition-based stats. Identities = 85/405 (20%), Positives = 143/405 (35%), Gaps = 30/405 (7%) Query: 6 RIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPL 65 R + Y++DR ++ + + + YD+ R+ + P Sbjct: 1060 RQRLVSERRYQWDRADQIIRQIVTDGAPSSPAEKYSQSLWGYDAAGRMTRSIQ-----PG 1114 Query: 66 VESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDG-DRLTTIQNDRTRIQT 124 E R+ YD R + E W +L ++ + + +DG R++ + + + Sbjct: 1115 GEERFWYDAADNRTS------EDLHPVWDNLLKRLEGIRWEYDGFGRMSERHDSQRGVVQ 1168 Query: 125 IYQPGSFTPLIRVETATG---ELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLE 181 + + V A+ Q +L + + + ++ Sbjct: 1169 RFSYDDEHRIREVLIEGDAEYTRAQYQYDALGRRIGKQVWRRHVAQPECTHYAWSGMQMV 1228 Query: 182 SEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGA 241 E +D E + +++ + + Y +++ YH + GLP + G Sbjct: 1229 GE-HSDSKPEAAVQYVYAENSYEPIARVD---SYQQHAEVYWYHTEINGLPDRVTDIRGD 1284 Query: 242 TEWCAEYDEWGNLLNEENPHQL--QQLIRLPGQQYDEESGLYYNRHRYYDPLQGRYITQD 299 T W + WG E Q +R GQ D E+GL+YN RYYDP GRY D Sbjct: 1285 TVWQGAFAAWGRTTRESTGVDWEVPQNLRFQGQYLDRETGLHYNTFRYYDPCGGRYTQLD 1344 Query: 300 PIGLKGGWNFYQYPLNPVQYIDSMGLASKYGHLNNGGYGARPNKPPTPDPSKLPDIAKQL 359 PIGL GG N YQY + + ID +GLA LNNG Y + D + Sbjct: 1345 PIGLMGGLNLYQYAPDVLTGIDPLGLA---TRLNNGQYNVFQEHTINAEHIYSSDGVQFN 1401 Query: 360 RLPYPIDQASSAPNVFKTFFRALSPYDYTLYCRKWV-KPNLTCTP 403 R + F+ P W+ PN +P Sbjct: 1402 RANTEFINRMNTDATFRRDMLGRYP-----ELSDWMKNPNKASSP 1441 Score = 94.9 bits (234), Expect = 7e-18, Method: Composition-based stats. Identities = 50/233 (21%), Positives = 82/233 (35%), Gaps = 23/233 (9%) Query: 1 MWPDNRIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQ 60 +W DN + R + YD GR++E+ D R+ YD +HR+ Sbjct: 1135 VW-DNLLKRLEGIRWEYDGFGRMSERHDSQR--------GVVQRFSYDDEHRIREVLIEG 1185 Query: 61 YAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDR- 119 AE ++Y YD LGRR+ K+VWRR +P+ T Y W G ++ +D Sbjct: 1186 DAE-YTRAQYQYDALGRRIGKQVWRRHV---------AQPECTHYAWSGMQMVGEHSDSK 1235 Query: 120 --TRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQML 177 +Q +Y S+ P+ RV++ + + L + G V+ Sbjct: 1236 PEAAVQYVYAENSYEPIARVDSYQQHAEVYWYHTEINGLPDRVTDIRGDTVWQGAFAAWG 1295 Query: 178 DRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRG 230 D ++ R+ + Y P D G Sbjct: 1296 RTTRESTGVDWEVPQNLRFQGQYLDRETGLHYNTFRYYDPCGG-RYTQLDPIG 1347 Score = 59.8 bits (143), Expect = 2e-07, Method: Composition-based stats. Identities = 38/294 (12%), Positives = 77/294 (26%), Gaps = 53/294 (18%) Query: 16 RYDRHGRLTEKTDLIPE-------------GVIRTDDERTHRYHYDSQHRLVHYTRT--- 59 +D R+T TD + Y +D + L Sbjct: 599 HWDALSRITAWTDAHGGHWSFNWGGDSEQLLAMTQPGGARWEYAWDERGNLTMERDPLDR 658 Query: 60 ---------------QYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTW 104 + + +Y Y+ G VA VT Sbjct: 659 TRITTWHPLYALPLKEVLPDGAQWQYEYNLAGDVVALTDP--------------AGGVTR 704 Query: 105 YGWDGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGG-ED 163 + W+ T + D + LIR E +G ++ Q + L + + Sbjct: 705 FEWNEQGDLTRRIDALENSHQFWWDMRGQLIREEDCSGYQSQRQYDACGKLLSTTDALGN 764 Query: 164 GGSVVFPPVLVQ----MLDRLESEILADRVSEESRRWLAS--CGLTVEQMQNQMDPVYTP 217 + D E+ ++ + + + Q+ P Sbjct: 765 TDRYQWSAAGRLHSYVRADGRETLFKYNKAGLLCGQNIDGMLERKVTLNARGQVIEAIDP 824 Query: 218 ARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRLPG 271 A ++ Y + G + L + W +Y G L+ +++ + + G Sbjct: 825 AGQVTRYDFNRAGRLVTLTNGNRQQ-WRFDYTPAGLLMQQQDYAGRKTEYQYNG 877 Score = 59.4 bits (142), Expect = 3e-07, Method: Composition-based stats. Identities = 45/273 (16%), Positives = 87/273 (31%), Gaps = 32/273 (11%) Query: 16 RYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYLYDPL 75 +YD G+L TD + T RY + + RL Y R E L + Y+ Sbjct: 748 QYDACGKLLSTTDALGN---------TDRYQWSAAGRLHSYVRADGRETL----FKYNKA 794 Query: 76 G-----RR--VAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQP 128 G + +R ++ QVT Y ++ + R Q + Sbjct: 795 GLLCGQNIDGMLERKVTLNARGQVIEAIDPAGQVTRYDFNRAGRLVTLTNGNRQQWRFDY 854 Query: 129 GSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADR 188 L++ + G + Q + ++ P++V + ++A Sbjct: 855 TPAGLLMQQQDYAGRKTEYQYNGV-QQVETLIRHPVRDSQLAPLVVNYEYDVLGRMVARE 913 Query: 189 VSEESRRWLASCGLTV-------EQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGA 241 ++ + T Q ++ ++ ++ D G ++ + GA Sbjct: 914 TAQHRTEYHYHALSTEIHRFPYDAWRQAIINECEPTDAEVVVFQRDTLGRLVSEQNHSGA 973 Query: 242 TEWCAEYDEWGNLLNEENPHQLQ-QLIRL-PGQ 272 + YD GNL P + Q +R G Sbjct: 974 --YHHRYDALGNLSASVYPDGREMQFLRYGTGH 1004 Score = 57.5 bits (137), Expect = 1e-06, Method: Composition-based stats. Identities = 34/276 (12%), Positives = 68/276 (24%), Gaps = 47/276 (17%) Query: 4 DNRIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHR---LVHYTRTQ 60 NR + + Y G L ++ D R Y Y+ + L+ + Sbjct: 845 GNR----QQWRFDYTPAGLLMQQQDYA---------GRKTEYQYNGVQQVETLIRHPVRD 891 Query: 61 YAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLT------- 113 + Y YD LGR VA+ + + ++ + +D R Sbjct: 892 SQLAPLVVNYEYDVLGRMVARETAQHRTEYHYHAL---STEIHRFPYDAWRQAIINECEP 948 Query: 114 ---------------TIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQ 158 + ++ + L G + R L+ Sbjct: 949 TDAEVVVFQRDTLGRLVSEQNHSGAYHHRYDALGNLSASVYPDGREMQFLRYGTGHLLEM 1008 Query: 159 SGGEDGGSVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPA 218 G + L R E ++ + +T + + + Sbjct: 1009 RLTSGGRTHSLASYQRDRLHR--ETHRTQGELELETQYDIAGRITQRRSVDNLRQRLVSE 1066 Query: 219 RKIHLYHCDHRGLPLALVSTEG--ATEWCAEYDEWG 252 R+ D +V+ + WG Sbjct: 1067 RRYQWDRADQI--IRQIVTDGAPSSPAEKYSQSLWG 1100 Score = 42.5 bits (98), Expect = 0.036, Method: Composition-based stats. Identities = 23/259 (8%), Positives = 47/259 (18%), Gaps = 37/259 (14%) Query: 14 LYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYLYD 73 + ++ G+L + + + RL + + Y Y+ Sbjct: 453 HFSWNDDGKLVRISSDNDALDVELEYGTH-------LGRLSAVYQIAAGARHLLVSYGYN 505 Query: 74 PLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQ---------- 123 G+ + G ++ + Sbjct: 506 QQGQLTTVTDADAIVTRRYGWDQASDMLAWHSYATGLKIQYQWRPAINSRHWRVHAYQVC 565 Query: 124 ---------TIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLV 174 + + RV G ++ + GG F Sbjct: 566 DEQGEVLESWRIETDEQQRVARVSNDEG-VSSEHHWDALSRITAWTDAHGGHWSFNWGGD 624 Query: 175 -------QMLDRLESEILADRVSEESRRWLASCG---LTVEQMQNQMDPVYTPARKIHLY 224 E D + T + P Y Sbjct: 625 SEQLLAMTQPGGARWEYAWDERGNLTMERDPLDRTRITTWHPLYALPLKEVLPDGAQWQY 684 Query: 225 HCDHRGLPLALVSTEGATE 243 + G +AL G Sbjct: 685 EYNLAGDVVALTDPAGGVT 703 >UniRef50_C6M5B1 Rhs-related protein n=7 Tax=Proteobacteria RepID=C6M5B1_NEISI Length = 1934 Score = 213 bits (543), Expect = 8e-54, Method: Composition-based stats. Identities = 77/334 (23%), Positives = 115/334 (34%), Gaps = 33/334 (9%) Query: 12 HYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYL 71 Y+YD G L D + Y YD+ R+ + Y Sbjct: 1541 GRRYQYDTIGNLVRTDDQT---------NGSRNYTYDALGRITQS---------ADEHYR 1582 Query: 72 YDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQPGSF 131 YDP ++G K Y G+ + Q+D Y + Sbjct: 1583 YDPAHNLT------DGSRISGNRLTQYKGTSYRYDPLGNLIEKQQHDGEIQHYRYNADNQ 1636 Query: 132 TPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSE 191 + + R + + G+ + + RL E DR Sbjct: 1637 LTEAEIHRPGQNTVLYRYRYDPIGRRIAKAHPDGNEI---QYLWDGSRLLQEYRKDR--- 1690 Query: 192 ESRRWLASCGLTVEQMQNQMDPVYTPA-RKIHLYHCDHRGLPLALVSTEGATEWCAEYDE 250 + ++ + E + + R+I YH D G+P + EG W +Y Sbjct: 1691 -TYTYIYTEDRNYEPLAQITTYNGSDKVREILYYHNDQIGIPREMTDEEGNIVWSGDYSG 1749 Query: 251 WGNLLNEEN-PHQLQQLIRLPGQQYDEESGLYYNRHRYYDPLQGRYITQDPIGLKGGWNF 309 WG L E + Q RL Q YDEE+GL+YN RYYDP GR+ QDPI L GG + Sbjct: 1750 WGKLTQEGRLKLDVYQPFRLQNQYYDEETGLHYNFFRYYDPEIGRFTQQDPIKLLGGESL 1809 Query: 310 YQYPLNPVQYIDSMGLASKYGHLNNGGYGARPNK 343 Y N ++D++GLA + G Sbjct: 1810 YALAPNVFVWLDTLGLAKYKCIADEKEGGGTRGY 1843 Score = 74.8 bits (182), Expect = 7e-12, Method: Composition-based stats. Identities = 43/266 (16%), Positives = 61/266 (22%), Gaps = 27/266 (10%) Query: 18 DRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYLYDPLGR 77 D GR + TD + R RY Y+ L E YD R Sbjct: 1089 DALGRPIKITDEM---------GRETRYRYNECGLLTFV----GGEGGQNQHIRYDQERR 1135 Query: 78 RV-------AKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQPGS 130 V K + K T Y ++ + T D ++ Sbjct: 1136 PVEITLPHNQKTLIEYNEQGLPATQSDSKGNTTRYRYNENGQITQITDAKNNTYTFEYDL 1195 Query: 131 FTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFP----PVLVQMLDRLESEILA 186 L +G+ + + + P+ D Sbjct: 1196 HHRLSTQTDCSGQQTRYTYNDEGKLESITDAAGHTTHYHYQNSKPLRTDYPDGSSEHFSY 1255 Query: 187 DRVSEESRRWLASCGLTVEQMQNQMDPVYTPA--RKIHLYHCDHRGLPLALVSTEGATEW 244 D S A T N P Y D G LV+ G + Sbjct: 1256 DHAGRLSVLTDAEGNRTAYDYDNDSKPTIRYNALGGAFQYRYDSVGRLKTLVNENGD-SY 1314 Query: 245 CAEYDEWGNLLNEENPHQLQQLIRLP 270 EYDE L+ E Sbjct: 1315 AFEYDERDRLIRETGFDGKMTRYTYN 1340 Score = 74.5 bits (181), Expect = 9e-12, Method: Composition-based stats. Identities = 81/526 (15%), Positives = 137/526 (26%), Gaps = 105/526 (19%) Query: 10 DAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESR 69 YRY+ +G++T+ TD T+ + YD HRL TQ ++R Sbjct: 1165 GNTTRYRYNENGQITQITDAKNN---------TYTFEYDLHHRL----STQTDCSGQQTR 1211 Query: 70 YLYDPLGRRVAKRVWRRERDLTGWMS---------------------------LSRKPQV 102 Y Y+ G+ + + + + Sbjct: 1212 YTYNDEGKLESITDAAGHTTHYHYQNSKPLRTDYPDGSSEHFSYDHAGRLSVLTDAEGNR 1271 Query: 103 TWYGWDGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSG-G 161 T Y +D D TI+ + Y+ S L + G+ + ++++G Sbjct: 1272 TAYDYDNDSKPTIRYNALGGAFQYRYDSVGRLKTLVNENGDSYAFEYDERDRLIRETGFD 1331 Query: 162 EDGGSVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKI 221 + P + + + D + R Q Sbjct: 1332 GKMTRYTYNPAGELIREEEYASGNIDVRTRPLRTITYHRDRIGRIRQKDSHLDGGEILST 1391 Query: 222 HL-------------------YHCDHRGLPLA--------LVSTE--------GATEWCA 246 H + DH GL + S+ A Sbjct: 1392 HYRYDKLNRLIQAHNAHSELRFGYDHNGLIKEQLIHLDEPITSSTSRSQSKDVAAQITEH 1451 Query: 247 EYDEWGNLLNEENPHQLQQLIRL--PGQQYD---EESGLYYN----RHRYYDPLQGRYIT 297 YD GN P G + + + L HR + G+ T Sbjct: 1452 RYDVLGNRTQTILPTGEVLNRLYYGSGHLHHINLDGTTLADIERDALHRPIERTIGKLNT 1511 Query: 298 Q---DPIG-LKGGWNFYQYPLNPVQYIDSMGLASKYGHLNNGGYGARPNKPPTPDPSKLP 353 Q DP+G LK N D L + + G R + + Sbjct: 1512 QFQLDPLGRLKQQIAQ----PNSHNKADPAVLIGRRYQYDTIGNLVRTDDQTNGSRNYTY 1567 Query: 354 DIAKQLR----LPYPIDQASSAPNVFKTFFRALSPYDYTLYCRKWVKPNLTCTPQDDSQY 409 D ++ Y D A + + + L+ Y T Y R NL Q D + Sbjct: 1568 DALGRITQSADEHYRYDPAHNLTDGSRISGNRLTQYKGTSY-RYDPLGNLIEKQQHDGEI 1626 Query: 410 PGMDTKTASDYL-PQTNWPTTQ---LPPGYTCAEPYL---FPDINK 448 + + + P Y + PD N+ Sbjct: 1627 QHYRYNADNQLTEAEIHRPGQNTVLYRYRYDPIGRRIAKAHPDGNE 1672 Score = 61.7 bits (148), Expect = 5e-08, Method: Composition-based stats. Identities = 56/371 (15%), Positives = 82/371 (22%), Gaps = 98/371 (26%) Query: 13 YLYRYDRHGRLTEKTDLIPEGVIRTD------------DERTHRYHYD---SQHRLVHYT 57 YRYD +G L D R Y YD Q R++ Sbjct: 978 VRYRYDDNGDLVAVEDAEGFVHRRFGYRRHMMIRHQTTAGLNTYYQYDHYNPQGRVLRSY 1037 Query: 58 RTQYAEPLVESRYLY--------DPLGR-----------RVAKRVWRRERDLTGWMSLSR 98 E R+ Y D LGR V K LT +L R Sbjct: 1038 TDNG----EEWRFAYADGHTQITDALGRSEHLYYDHHGEVVKKVFADGSSILTERDALGR 1093 Query: 99 K-------PQVTWYGWDGDRLTTIQNDRTRIQTIYQPGSFTPLIRVE------------- 138 + T Y ++ L T + + + Sbjct: 1094 PIKITDEMGRETRYRYNECGLLTFVGGEGGQNQHIRYDQERRPVEITLPHNQKTLIEYNE 1153 Query: 139 -------TATGELAKTQRRSLADTLQQSGGEDGGSVVFPPV------LVQMLDRLESEIL 185 + + R + + Q + F ++ Sbjct: 1154 QGLPATQSDSKGNTTRYRYNENGQITQITDAKNNTYTFEYDLHHRLSTQTDCSGQQTRYT 1213 Query: 186 ADRVSEESRRWLASCGLTVEQMQNQMDP-VYTPARKIHLYHCDHRGLPLALVSTEGATEW 244 + + A+ T QN P + DH G L EG Sbjct: 1214 YNDEGKLESITDAAGHTTHYHYQNSKPLRTDYPDGSSEHFSYDHAGRLSVLTDAEGNRTA 1273 Query: 245 --------------------CAEYDEWGNLLNEENPHQLQQLIRLPGQQYD---EESGLY 281 YD G L N + + D E+G Sbjct: 1274 YDYDNDSKPTIRYNALGGAFQYRYDSVGRLKTLVNENGDSYAFEYD--ERDRLIRETGFD 1331 Query: 282 YNRHRY-YDPL 291 RY Y+P Sbjct: 1332 GKMTRYTYNPA 1342 >UniRef50_A5GE16 YD repeat protein n=1 Tax=Geobacter uraniireducens Rf4 RepID=A5GE16_GEOUR Length = 1600 Score = 213 bits (543), Expect = 9e-54, Method: Composition-based stats. Identities = 78/381 (20%), Positives = 128/381 (33%), Gaps = 68/381 (17%) Query: 4 DNRIAR----DAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRT 59 NR+ + Y YD GR T + ++ T Y YD RL + T Sbjct: 1149 GNRLTDIIAPAGTFTYGYDALGRRTS---------LGYPNQVTAAYTYDDAGRLTSLSHT 1199 Query: 60 QYAEPLVESRYLYDPLGRRVAKRVWRRERDLTG-----WMSLSRKPQVTWYGWDGDRLT- 113 + Y D +G R +K E L + S KP+ Y G+R T Sbjct: 1200 AGGSTIAAFSYALDNVGNRTSKATTEAENYLYDVVYRLLNAASPKPETFTYDAVGNRQTG 1259 Query: 114 -------------TIQNDRTRIQTIYQ---------------------PGSFTPLIRVET 139 ++ Y + L++VE Sbjct: 1260 PGAKDTGYLHNAGNQMTQGRKLAYGYDNNGNQTNRAVPGAFDKSWTQTWDNENRLVKVEK 1319 Query: 140 ATGE---LAKTQRRSLADTLQQ--SGGEDGGSVVFPPVLVQMLDRLESEILADRVSEESR 194 G + + + +DG + V D + E+ D ++ Sbjct: 1320 VKGAEKRTVSFSYDPFGRRIVKQMTVVKDGVTKTSSSSYVYDNDNIALEVYTDETGAVTK 1379 Query: 195 RWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNL 254 + E + + + + YH D G +++ EYD +G + Sbjct: 1380 TFYTHGAGIDEHLALE------HGGQFYYYHADGLGSIVSITDANRNVVQSYEYDSFGMV 1433 Query: 255 LNEENPHQLQQLIRLPGQQYDEESGLYYNRHRYYDPLQGRYITQDPIGLKGGWNFYQYP- 313 G+++D+E+GLY+ R RYYDP++GR+I++DP+G KGG N Y Y Sbjct: 1434 KPSTV---FANSYTYTGREWDKETGLYFYRARYYDPMEGRFISKDPVGFKGGINIYAYVS 1490 Query: 314 LNPVQYIDSMGLASKYGHLNN 334 N V D GL ++ Sbjct: 1491 NNVVNDTDPSGLYPGPCGNDS 1511 Score = 92.6 bits (228), Expect = 3e-17, Method: Composition-based stats. Identities = 41/296 (13%), Positives = 78/296 (26%), Gaps = 34/296 (11%) Query: 11 AHYLYRYDRHGRLTEKTDLIPEGVIRTDDER-----------THRYHYDSQHRLVHYTRT 59 Y YD + +T TD + T + R T YD+ L+ T Sbjct: 793 GTTTYSYDANDYMTSLTDPLSNTTSYTYNSRGQVLTVSGPAGTTTNTYDANGNLLTVTDP 852 Query: 60 QYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKP-------QVTWYGWDGDRL 112 A + Y YDP G + + + + T Y D + Sbjct: 853 ARA----TTTYEYDPKGNVTKITDAKGKATTFVYDASGMLTSTTDQTGATTTYTHDANGS 908 Query: 113 TTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPV 172 D T T + L V G + + + + + Sbjct: 909 MATSTDTTGKVTTFTYDGMNRLATVTDPLGHVTTYDYDKIGNRTSVTDANGNTTTYKYNY 968 Query: 173 LVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLP 232 Q+++ +++ + + + G + T + + D G Sbjct: 969 RGQVIEAKDAQGSTTTYTYGATGCTSCGGGVDKLTALTDAKGQTTSWQ-----YDLLGHL 1023 Query: 233 LALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRL------PGQQYDEESGLYY 282 + YD G + + + + G+ Y + S L Y Sbjct: 1024 ASETDPL-QKVTAYMYDPAGRMNLKTDANGAAVAYGYDPLRRLTGKTYPDGSSLSY 1078 Score = 75.6 bits (184), Expect = 4e-12, Method: Composition-based stats. Identities = 41/312 (13%), Positives = 67/312 (21%), Gaps = 73/312 (23%) Query: 9 RDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEP---- 64 + Y YD G L K D Y YD HR++ T + Sbjct: 679 DSGQWSYTYDPAGFLLTKAD---------PGGNVVTYVYDDTHRVISGTDPEGRSRDLDY 729 Query: 65 -------------------LVESRYLYD-PLGRRVAKRVWRRERDLTGWMSLSRKPQVTW 104 E +Y YD G +K T Sbjct: 730 AASVPGSDTAKTTTFKEKDGGEWQYTYDTSAGTLTSKTDP--------------LGNTTS 775 Query: 105 YGWDGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDG 164 + +D + + + T Y + + + S L SG Sbjct: 776 FTYDSRKKMLTKTEPVIGTTTYSYDANDYMTSLTDPLSNTTSYTYNSRGQVLTVSGPAGT 835 Query: 165 GSVVFPPV----LVQMLDRLESEILADRVSEESRRWLASC--GLTVEQMQNQMDPVYTPA 218 + + V R + D ++ A V + Sbjct: 836 TTNTYDANGNLLTVTDPARATTTYEYDPKGNVTKITDAKGKATTFVYDASGMLTSTTDQT 895 Query: 219 RKIHLYHCDHRGLPLALVSTEGAT--------------------EWCAEYDEWGNLLNEE 258 Y D G T G +YD+ GN + Sbjct: 896 GATTTYTHDANGSMATSTDTTGKVTTFTYDGMNRLATVTDPLGHVTTYDYDKIGNRTSVT 955 Query: 259 NPHQLQQLIRLP 270 + + + Sbjct: 956 DANGNTTTYKYN 967 Score = 69.1 bits (167), Expect = 4e-10, Method: Composition-based stats. Identities = 41/240 (17%), Positives = 62/240 (25%), Gaps = 30/240 (12%) Query: 8 ARDAHYLYRYDRHGRLTEKT-----------DLIPEGVIRTDDERTHRYHYDSQHRLVHY 56 A A Y YD RLT KT D + T+ Y YD+ R Sbjct: 1050 ANGAAVAYGYDPLRRLTGKTYPDGSSLSYTYDTAGHVQTAANSNVTYIYAYDAAGRATSV 1109 Query: 57 TRTQYAEPLVESRYLYDPLGRRVA-KRVWRRERDLTGWMSLSRKPQ-----------VTW 104 T ++ Y YD LG R K + + + Sbjct: 1110 TDSRG----YTLAYEYDLLGNRTKMKFQPGTADERITTYAYDDGNRLTDIIAPAGTFTYG 1165 Query: 105 YGWDGDRLTTIQNDRTRIQTIYQPGSFTPLIRVE-TATGELAKTQRRSLADTLQQSGGED 163 Y G R T ++ Y L + TA G +L + ++ Sbjct: 1166 YDALGRR--TSLGYPNQVTAAYTYDDAGRLTSLSHTAGGSTIAAFSYALDNVGNRTSKAT 1223 Query: 164 GGSVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHL 223 + + +V L S + G + T RK+ Sbjct: 1224 TEAENYLYDVVYRLLNAASPKPETFTYDAVGNRQTGPGAKDTGYLHNAGNQMTQGRKLAY 1283 Score = 66.8 bits (161), Expect = 2e-09, Method: Composition-based stats. Identities = 41/248 (16%), Positives = 78/248 (31%), Gaps = 27/248 (10%) Query: 3 PDNRIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYA 62 N++ + Y YD +G T + + +++ +D+++RLV + + A Sbjct: 1271 AGNQMTQGRKLAYGYDNNGNQTNR-------AVPGAFDKSWTQTWDNENRLVKVEKVKGA 1323 Query: 63 EPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRI 122 E + YDP GRR+ K++ + +T S S Y D L ++ + Sbjct: 1324 E-KRTVSFSYDPFGRRIVKQMTVVKDGVTKTSSSS-----YVYDNDNIALEVYTDETGAV 1377 Query: 123 QTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLES 182 + + G + S + +VV S Sbjct: 1378 TKTFYTHGAGIDEHLALEHG-GQFYYYHADGLGSIVSITDANRNVVQSYEYDSFGMVKPS 1436 Query: 183 EILADRVSEESRRWLASCGLTVEQMQN---------QMDPVYTPAR-KIHLYHCDHRGLP 232 + A+ + R W GL + + DPV I+ Y + Sbjct: 1437 TVFANSYTYTGREWDKETGLYFYRARYYDPMEGRFISKDPVGFKGGINIYAYVSN---NV 1493 Query: 233 LALVSTEG 240 + G Sbjct: 1494 VNDTDPSG 1501 Score = 55.6 bits (132), Expect = 4e-06, Method: Composition-based stats. Identities = 36/267 (13%), Positives = 69/267 (25%), Gaps = 50/267 (18%) Query: 17 YDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYLYDPLG 76 +D+ GR+ + D + + YD L T + YD Sbjct: 605 FDQWGRILSRLDK---------NGTAMTFAYDG-GNLSGVTD----GAGRTVTFAYDGTN 650 Query: 77 RRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQPGSFTPLIR 136 + ++ K +G+DG L T+ N + Q Y L+ Sbjct: 651 KLLSVTDP--------------KGNAYTFGYDGGNLITVTNPDSG-QWSYTYDPAGFLLT 695 Query: 137 VETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSEESRRW 196 G + + + E + V D ++ ++ E W Sbjct: 696 KADPGGNVVTYVYDDTHRVISGTDPEGRSRDLDYAASVPGSDTAKTTTFKEKDGGE---W 752 Query: 197 LASCGLTVEQMQNQMDPVYTPARKIH-----------------LYHCDHRGLPLALVSTE 239 + + + ++ DP+ + Y D +L Sbjct: 753 QYTYDTSAGTLTSKTDPLGNTTSFTYDSRKKMLTKTEPVIGTTTYSYDANDYMTSLTDPL 812 Query: 240 GATEWCAEYDEWGNLLNEENPHQLQQL 266 T Y+ G +L P Sbjct: 813 SNTT-SYTYNSRGQVLTVSGPAGTTTN 838 >UniRef50_C9NF93 YD repeat protein n=1 Tax=Streptomyces flavogriseus ATCC 33331 RepID=C9NF93_9ACTO Length = 1536 Score = 213 bits (542), Expect = 1e-53, Method: Composition-based stats. Identities = 83/402 (20%), Positives = 128/402 (31%), Gaps = 42/402 (10%) Query: 8 ARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVE 67 Y Y G LT D + R+ D+ R+ Sbjct: 1110 RTIQQRGYHYRGDGGLTSINDRLSG---------VRRFDLDAVGRVTSS-----HSAHWT 1155 Query: 68 SRYLYDPLGRRVA--------KRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQN-- 117 RY YD G + + ++ R G + G + + Sbjct: 1156 ERYAYDAAGNQTSASLPKSHPRQEAAGPRSYKGTRVSRAGNVRYEHDAQGRVVLRQKTHL 1215 Query: 118 DRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSG-GEDGGSVVFPPVLVQM 176 R YQ + L+ + T G L + Q +L + +D +V+ + V Sbjct: 1216 SRKADTWRYQWDAEDRLVSLTTPDGTLWRYQYDALGRRTAKQRLADDSQTVLDEIIFVWD 1275 Query: 177 LDRLESEILADRV--SEESRRWLASC---GLTVEQMQNQMDPVYTPARKIHLYHCDHRGL 231 L E D + W E++ Q P T + D G Sbjct: 1276 GVTLCEESSYDLAMLRYVTLTWDHDGIRPLAQTERVATQGAPQDTVDERFFAIITDLVGT 1335 Query: 232 PLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEESGLYYNRHRYYDPL 291 P L+ G W WG ++ +R PGQ +D+ES L+YN RYYDP Sbjct: 1336 PTELIDESGFISWRVRRSVWGTTEWAKDSSAY-TPLRFPGQYFDQESLLHYNYLRYYDPD 1394 Query: 292 QGRYITQDPIGLKGGWNFYQYPLNPVQYIDSMGLASK-------YGHLNNGGYGARPNKP 344 RYI+ DPIGL+GG N + Y NP +ID +GL+ G+ G Sbjct: 1395 VSRYISPDPIGLEGGPNPHWYGPNPYTWIDPLGLSLCRVKPRLEDGNTKEGWQHINERHI 1454 Query: 345 PTPDPSKLPDIA----KQLRLPYPIDQASSAPNVFKTFFRAL 382 D+ + ++ D+ R + Sbjct: 1455 SGTAAHGHGDLMPPTTTRAQVEAAADKIIEKGTRISDPNRTI 1496 Score = 76.8 bits (187), Expect = 2e-12, Method: Composition-based stats. Identities = 41/237 (17%), Positives = 68/237 (28%), Gaps = 25/237 (10%) Query: 2 WPDNRIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQY 61 + R++R + Y +D GR+ + T RY +D++ RLV T Sbjct: 1186 YKGTRVSRAGNVRYEHDAQGRVVLRQKTHLSRK-----ADTWRYQWDAEDRLVSLTTPDG 1240 Query: 62 AEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTR 121 RY YD LGRR AK+ + + + WDG L + Sbjct: 1241 ----TLWRYQYDALGRRTAKQRLADDSQTVLDEII--------FVWDGVTLCEESSYDLA 1288 Query: 122 ----IQTIYQPGSFTPLIRVETATGELAK--TQRRSLADTLQQSGGEDGGSVVFPPVLVQ 175 + + PL + E + A T + G + + Sbjct: 1289 MLRYVTLTWDHDGIRPLAQTERVATQGAPQDTVDERFFAIITDLVGTPTELIDESGFISW 1348 Query: 176 MLDRLESEILADRVSEESRRWLASCGLTVEQ--MQNQMDPVYTPARKIHLYHCDHRG 230 + R + L G +Q + + Y D G Sbjct: 1349 RVRRSVWGTTEWAKDSSAYTPLRFPGQYFDQESLLHYNYLRYYDPDVSRYISPDPIG 1405 Score = 69.8 bits (169), Expect = 2e-10, Method: Composition-based stats. Identities = 34/291 (11%), Positives = 70/291 (24%), Gaps = 41/291 (14%) Query: 15 YRYDRHGRLTEKTDLIPE------------GVIRTDDERTHRYHYDSQHRLVHYTRTQYA 62 Y YD G L ++D + + T R +D+ R Sbjct: 781 YEYDEAGHLLSESDSLGNRSIIQCNKAGLTVSVTDPLGATTRCVHDTFGRPTSTVDELGG 840 Query: 63 -----------------EPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVT-- 103 E ++YD G + + + T Sbjct: 841 VTKFEWTVEGRIARRLEADGTEQSWVYDGEGNCIRHTDALGGVTVHEYTDFDLLTGRTDP 900 Query: 104 -----WYGWDGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQ 158 + +D + T ++ + Y + S + + + Sbjct: 901 DGARYEFSYDSNLQLTQVSNPQGLTWKYLYDPAGRIQCEIDFDHRTLSYAYDSASRLVSR 960 Query: 159 SGGEDGGSVVFPPVLVQMLD----RLESEILADRVSEESRRWLASCGLTVEQMQNQMDPV 214 G + L Q+L + D E ++ + +T + + Sbjct: 961 KNGLGQTTFFEHNELGQVLHKKTVDSVTTFEYDIFDELAKAASSDTTITRMRDRYGRLKS 1020 Query: 215 YTPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQ 265 T + + D G + GA YD G + + + Sbjct: 1021 ETVNGRTSTFAYDDLGRRTGRTTPSGAI-STWTYDAAGRRTSLTSSGRTLT 1070 Score = 66.0 bits (159), Expect = 3e-09, Method: Composition-based stats. Identities = 37/266 (13%), Positives = 76/266 (28%), Gaps = 29/266 (10%) Query: 9 RDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVES 68 + + Y YD GR+ D RT Y YDS RLV + + Sbjct: 922 QGLTWKYLYDPAGRI---------QCEIDFDHRTLSYAYDSASRLVS----RKNGLGQTT 968 Query: 69 RYLYDPLGRRVAKRVWRRERDLTGWM------SLSRKPQVTWYGWDGDRLTTIQNDRTRI 122 + ++ LG+ + K+ + + S +T RL + + Sbjct: 969 FFEHNELGQVLHKKTVDSVTTFEYDIFDELAKAASSDTTITRMRDRYGRLKSETVNGRTS 1028 Query: 123 QTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLES 182 + T +G ++ + + + + +++ R+ + Sbjct: 1029 T--FAYDDLGRRTGRTTPSGAISTWTYDAAGRRTSLTSSGRTLTFEHDAMGQELVRRVGA 1086 Query: 183 EILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGAT 242 +I + R ++ E+ Q Y + + G+ + G Sbjct: 1087 DITLRNTFDVMGRLTDEQVISGERTIQQRGYHYRGDGGLTSINDRLSGVRRFDLDAVGRV 1146 Query: 243 EW--------CAEYDEWGNLLNEENP 260 YD GN + P Sbjct: 1147 TSSHSAHWTERYAYDAAGNQTSASLP 1172 Score = 51.3 bits (121), Expect = 8e-05, Method: Composition-based stats. Identities = 42/308 (13%), Positives = 79/308 (25%), Gaps = 57/308 (18%) Query: 14 LYRYDRHG-----RLTEKTDLIPEGVIRTDDERTH------------RYHYDSQHRLVHY 56 + +D R+T TD + ++R+ + +D HRL+ Sbjct: 649 RFTWDGTDPETGLRMTSMTDSLGHTTRYVVNDRSQVVAEIDPMGAVTHFDFDRFHRLLSV 708 Query: 57 TRTQYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMS-------LSRKPQVTWYGWDG 109 T +R +D GR + + + VT +D Sbjct: 709 TDPLGH----TTRSTFDVHGRPTLVERPDGRQTRAEYNDFGLPVRIVGTDGNVTRQSYDE 764 Query: 110 DRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGEL--------------------AKTQR 149 T + + + Y+ L+ + G Sbjct: 765 RGNCTKVSHPSGAASFYEYDEAGHLLSESDSLGNRSIIQCNKAGLTVSVTDPLGATTRCV 824 Query: 150 RSLADTLQQSGGEDGGSVVFPPVLVQML------DRLESEILADRVSEESRRWLASCGLT 203 + E GG F + + D E + D R A G+T Sbjct: 825 HDTFGRPTSTVDELGGVTKFEWTVEGRIARRLEADGTEQSWVYDGEGNCIRHTDALGGVT 884 Query: 204 VEQMQN--QMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPH 261 V + + + P + + D + + +G W YD G + E + Sbjct: 885 VHEYTDFDLLTGRTDPDGARYEFSYDSNLQLTQVSNPQG-LTWKYLYDPAGRIQCEIDFD 943 Query: 262 QLQQLIRL 269 Sbjct: 944 HRTLSYAY 951 Score = 51.0 bits (120), Expect = 9e-05, Method: Composition-based stats. Identities = 34/298 (11%), Positives = 70/298 (23%), Gaps = 45/298 (15%) Query: 8 ARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQH-----RLVHYTRTQYA 62 + Y Y YD H R + T+ R+ +D R+ T + Sbjct: 621 TNGSRYEYVYDEHDRCIYQA--------GTNGHLEARFTWDGTDPETGLRMTSMTDSLGH 672 Query: 63 EP-----------------LVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSR------- 98 + + +D R ++ + + R Sbjct: 673 TTRYVVNDRSQVVAEIDPMGAVTHFDFDRFHRLLSVTDPLGHTTRSTFDVHGRPTLVERP 732 Query: 99 KPQVTWYGWDGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQ 158 + T ++ L T +V +G + + L + Sbjct: 733 DGRQTRAEYNDFGLPVRIVGTDGNVTRQSYDERGNCTKVSHPSGAASFYEYDEAGHLLSE 792 Query: 159 SGGEDGGSVVF-----PPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDP 213 S S++ V V + + D + G+T + + Sbjct: 793 SDSLGNRSIIQCNKAGLTVSVTDPLGATTRCVHDTFGRPTSTVDELGGVTKFEWTVEGRI 852 Query: 214 VYT--PARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRL 269 + D G + G EY ++ L +P + Sbjct: 853 ARRLEADGTEQSWVYDGEGNCIRHTDALGGVTVH-EYTDFDLLTGRTDPDGARYEFSY 909 >UniRef50_B4EGW8 RHS-family protein n=9 Tax=Burkholderiaceae RepID=B4EGW8_BURCJ Length = 1515 Score = 212 bits (540), Expect = 2e-53, Method: Composition-based stats. Identities = 87/446 (19%), Positives = 148/446 (33%), Gaps = 50/446 (11%) Query: 16 RYDRHGRLTEKT-------DLIPEGVIRTDDERTHR-YHYDSQHRLVHYTRTQYAEPLVE 67 +YD GR+ + D + R ++ T + YHYD+ +L Sbjct: 1028 QYDALGRIRRQIAGPAVAFDALQADPARALEQLTRQVYHYDAAGQLERVDTGADTLTYQR 1087 Query: 68 ----------------SRYLYDPLGRRVAK-RVWRRERDLTGWMSLSRKPQVTWYGWDGD 110 + YD + A + + L + Y +D Sbjct: 1088 DERGQIICAESLLQPSEHFRYDAVMNIAAHGQRAPVDAHHYRRGGLPEQVGYARYKYDAR 1147 Query: 111 RLTTIQN----DRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGS 166 T + Y L+RV T + + + +++ + Sbjct: 1148 GRTIEKTVEQPGVRPKTWQYTWDGLNRLVRVVTPERGVWAYRYDAFNRRIEKQQVGGRET 1207 Query: 167 VVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHC 226 V F + +R + D + + W G + Q D + Sbjct: 1208 VKFLWDGPMLAERWIEQ--RDGTTGQVVTWHIEPGSFLPLAQETDDG-------LFPILT 1258 Query: 227 DHRGLPLALVSTEGATEWCAEYDEWGNLLNEE--------NPHQLQQLIRLPGQQYDEES 278 D G P + +G W A Y WG LL + + +R GQ D+E+ Sbjct: 1259 DQIGRPKTVFDEQGRPVWKAAYSLWGKLLPVKRPANDADCGATSIDTTLRFSGQWADDET 1318 Query: 279 GLYYNRHRYYDPLQGRYITQDPIGLKGGWNFYQYPLNPVQYIDSMGLASKYGHLNNGGYG 338 GL YN +RYYDP G+Y++ DPIGL GG Y +P Q+ID +GL Sbjct: 1319 GLNYNLNRYYDPDSGQYLSADPIGLLGGARTQAYVHDPSQWIDPLGLQGCKPAGKKISMR 1378 Query: 339 ARPNKPP----TPDPSKLPDIAKQLRLPYPIDQASSAPNVFKTFFRALSPYDYTLYCRKW 394 A + P T + ++A + R + T ++ +D L R+ Sbjct: 1379 AYRYEMPERFDTTWDAHEWNVAARHRYTKKGLGGVYGADSPATALAEVTHWDVDLSTREL 1438 Query: 395 VKPNLTCTPQDDSQYPGMDTKTASDY 420 + ++T D P + +TA+ Sbjct: 1439 ISKDVTLNNVLDLTDPSVRKQTAAAM 1464 Score = 72.5 bits (176), Expect = 3e-11, Method: Composition-based stats. Identities = 58/458 (12%), Positives = 108/458 (23%), Gaps = 92/458 (20%) Query: 9 RDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPL--- 65 + + Y YD HG +T+ D V RY YD+ R+V Q Sbjct: 544 QFGQFYYAYDEHGWMTQWRDTDQTDV---------RYRYDTAGRVVETGTRQGYHTGRFI 594 Query: 66 ------------VESRYLYDPLGRRVAKRVWRRERDLTGW------MSLSRKPQVTWYGW 107 E Y Y+ G A+ + W + + T Y + Sbjct: 595 YEAGCTRVIDVDGEWTYAYNDEGLVTAETDPLGHCTYSEWELGRLMARIDPLGRRTDYRY 654 Query: 108 DGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSV 167 D T + + + L G K + L+ + ++ + + Sbjct: 655 DERGQLTSVVESSGRTVDFDYDDEQRLTGARLPNGGTIKLEYDHLSRLIARTEPDGNKTT 714 Query: 168 VFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCD 227 E+L + R L + ++ + D Sbjct: 715 --------YRYGPRGELLRVVQGDRETRLDYDDRLRLTDIELPTGARFRRKI-------D 759 Query: 228 HRGLPLALVSTEGATEWCAEY-----DEWGNLLNEENPHQLQQLIRLPGQQYDEESGLYY 282 G L S +G +Y + G L P R + Sbjct: 760 ALGRLLEETSPDGHVT-RYDYADGPANPRGLLSAVTRPDGSVSRARYNSESL-------- 810 Query: 283 NRHRYYDPLQGRYITQDPIGLKGGWNFYQYPLNPVQYIDSMGLASKYGHLNNGGYGARPN 342 PV++ID +G + + A + Sbjct: 811 ---------------------------------PVEWIDPLGRTIQRTYGPFDLLTASID 837 Query: 343 KPPTPDPSKLPDIAKQLRLPYPIDQASSAPNVFKTFFRALSPYDYTLYCRKWVKPNLTCT 402 + + ++ + + + A + T Sbjct: 838 AAGHATRFEYDHATRLTKVINALGETYTYRYDAAGRLAAEIDWGGRATEYDRDAVGRLLT 897 Query: 403 PQDDSQYPGMDTKTASDYLPQTNWPTTQLPPGYTCAEP 440 T ASD L + + +L Y + Sbjct: 898 KTLPDGGQWRYTYDASDRLIEIDAGDVKLAYRYDASGR 935 Score = 69.5 bits (168), Expect = 3e-10, Method: Composition-based stats. Identities = 42/283 (14%), Positives = 79/283 (27%), Gaps = 43/283 (15%) Query: 13 YLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYLY 72 + YD RLT+ + + T+ Y YD+ RL + + Y Sbjct: 843 TRFEYDHATRLTKVINAL---------GETYTYRYDAAGRLAA----EIDWGGRATEYDR 889 Query: 73 DPLGRRVAKRVWRRERDLTGWMSLSRKPQV--------TWYGWDGDRLTTIQNDRTRIQT 124 D +GR + K + + + + R ++ Y G + T Sbjct: 890 DAVGRLLTKTLPDGGQWRYTYDASDRLIEIDAGDVKLAYRYDASGRLASAEVQGEHTHVT 949 Query: 125 IYQPGSFTPLI------------------RVETATGELAKTQRRSLADTLQQSGGEDGGS 166 + LI R T T ++ L Q G Sbjct: 950 RFAYDRNGRLIGEDQHGELLRHVYDADGQRRLRMTPRRETTYAYDVSGALTQVGQLTIRR 1009 Query: 167 VVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHC 226 + + ++ D + R+ + + R+++ H Sbjct: 1010 DGLGREIGREAGDFVAQQQYDALGRIRRQIAGPAVAFDALQADPARALEQLTRQVY--HY 1067 Query: 227 DHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRL 269 D G + GA + DE G ++ E+ Q + R Sbjct: 1068 DAAGQLERV--DTGADTLTYQRDERGQIICAESLLQPSEHFRY 1108 Score = 68.7 bits (166), Expect = 4e-10, Method: Composition-based stats. Identities = 45/318 (14%), Positives = 82/318 (25%), Gaps = 47/318 (14%) Query: 6 RIARDAHYLYRYDRHGRLTEKTDLIPEGVIR----------TDDERTHRYHYDSQHRLVH 55 R YRYD GR+ E R D + Y Y+ + + Sbjct: 562 RDTDQTDVRYRYDTAGRVVETGTRQGYHTGRFIYEAGCTRVIDVDGEWTYAYNDEGLVTA 621 Query: 56 YTRTQYAEPLVESR-----YLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGD 110 T E DPLGRR +R + + + + +D + Sbjct: 622 ETDPLGHCTYSEWELGRLMARIDPLGRRT---DYRYDERGQLTSVVESSGRTVDFDYDDE 678 Query: 111 RLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFP 170 + T + + LI G + + L+ G+ + + Sbjct: 679 QRLTGARLPNGGTIKLEYDHLSRLIARTEPDGNKTTYRYGPRGELLRVVQGDRETRLDYD 738 Query: 171 P-------------VLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTP 217 + +D L + R+ + G + + V P Sbjct: 739 DRLRLTDIELPTGARFRRKIDALGRLLEETSPDGHVTRYDYADGPANP--RGLLSAVTRP 796 Query: 218 ARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEE 277 + + LP+ + G T Y + L + +YD Sbjct: 797 DGSVSRARYNSESLPVEWIDPLGRTIQR-TYGPFDLLTASIDAAGHATRF-----EYDHA 850 Query: 278 SGLYY--------NRHRY 287 + L +RY Sbjct: 851 TRLTKVINALGETYTYRY 868 Score = 56.7 bits (135), Expect = 2e-06, Method: Composition-based stats. Identities = 48/281 (17%), Positives = 78/281 (27%), Gaps = 49/281 (17%) Query: 7 IARDAHYLYRYDRHGRLTEKTDLIPEGVIRT------------DDERTHRYHY-----DS 49 + D YD RLT+ R D RY Y + Sbjct: 727 VQGDRETRLDYDDRLRLTDIELPTGARFRRKIDALGRLLEETSPDGHVTRYDYADGPANP 786 Query: 50 QHRLVHYTRTQYAEPLVESRYLY----------DPLGRRVAKRVWRRERDLTGWMSLSRK 99 + L TR + SR Y DPLGR + + S+ Sbjct: 787 RGLLSAVTRPDGS----VSRARYNSESLPVEWIDPLGRTIQRT---YGPFDLLTASIDAA 839 Query: 100 PQVTWYGWDGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQS 159 T + +D T + Y+ + L G + R ++ L ++ Sbjct: 840 GHATRFEYDHATRLTKVINALGETYTYRYDAAGRLAAEIDWGGRATEYDRDAVGRLLTKT 899 Query: 160 GGEDGGSVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPAR 219 DGG + L +++ + + R+ AS L ++Q + V Sbjct: 900 -LPDGGQWRYTYDASDRLIEIDA-----GDVKLAYRYDASGRLASAEVQGEHTHVTR--- 950 Query: 220 KIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENP 260 + D G + G YD G P Sbjct: 951 ----FAYDRNGRLIGE-DQHGELL-RHVYDADGQRRLRMTP 985 Score = 52.9 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 55/451 (12%), Positives = 91/451 (20%), Gaps = 91/451 (20%) Query: 46 HYDSQHRLVHYTRTQYAEPLVESRYLY---DPLGRRVAKRVWRRERDLTGWMSLSRK--- 99 YD+ RL + Y D +R+ Sbjct: 483 SYDTAGRLSGMVHSDG----YRLEIAYPGRDRQLQRIVLHDADGGSRTLVGYDYQNGMLT 538 Query: 100 ------PQVTWYGWDGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGE---------- 143 +Y +D T D + Y+ + ++ T G Sbjct: 539 HVASFQFGQFYYAYDEHGWMTQWRDTDQTDVRYRYDTAGRVVETGTRQGYHTGRFIYEAG 598 Query: 144 -------LAKTQRRSLADTLQQSGGEDGGSVVFP--------PVLVQMLDRLESEILADR 188 + + L + + G + + + R + Sbjct: 599 CTRVIDVDGEWTYAYNDEGLVTAETDPLGHCTYSEWELGRLMARIDPLGRRTDYRYDERG 658 Query: 189 VSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWCAEY 248 + ++ P DH +A +G Y Sbjct: 659 QLTSVVESSGRTVDFDYDDEQRLTGARLPNGGTIKLEYDHLSRLIARTEPDGNKT-TYRY 717 Query: 249 DEWGNLLNEENPHQLQQLIRLPGQQYDEESGLYY-NRHRYYD---PLQGRY--------- 295 G LL D E+ L Y +R R D P R+ Sbjct: 718 GPRGELLRVVQG--------------DRETRLDYDDRLRLTDIELPTGARFRRKIDALGR 763 Query: 296 ----ITQDPIGLKGGWNFYQYPLNPVQYIDSMGLASKYGHLNNGGYGARPNKPPTPDPSK 351 + D G Y Y P GL S + AR N P Sbjct: 764 LLEETSPD-----GHVTRYDYADGPAN---PRGLLSAVTRPDGSVSRARYNSESLP---- 811 Query: 352 LPDIAKQLRLPYPIDQASSAPNVFKTFFRALSPYDYTLYCRKWVKPNLTCTPQDDSQYPG 411 + L I + ++ A LT + Sbjct: 812 ---VEWIDPLGRTIQRTYGPFDLLTASIDAAGHAT---RFEYDHATRLTKVINALGETYT 865 Query: 412 MDTKTASDYLPQTNWPTTQLPPGYTCAEPYL 442 A + +W L Sbjct: 866 YRYDAAGRLAAEIDWGGRATEYDRDAVGRLL 896 >UniRef50_B2VH58 Rhs family protein n=5 Tax=Enterobacteriaceae RepID=B2VH58_ERWT9 Length = 1322 Score = 212 bits (539), Expect = 2e-53, Method: Composition-based stats. Identities = 85/336 (25%), Positives = 124/336 (36%), Gaps = 43/336 (12%) Query: 13 YLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYLY 72 Y + R+G L + DL + HRY YD R+ E R+ + Sbjct: 915 REYGWRRNGELQQMVDL---------NSGVHRYQYDVLGRITQA---------GEERFAF 956 Query: 73 DPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQPGSFT 132 DP ++ + L + + Y G+ T + + + + Sbjct: 957 DPAHNLLS---AATDAPLRDNRMRVYEDKRWEYDAHGN--VTEKRIGRHTRQRFIWNAEH 1011 Query: 133 PLIRV---ETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRV 189 L + + + V DRL SEI Sbjct: 1012 QLEEAHGERRGVEQSTTYGYDAFGRRSWKKDKFGVTH------FVWDGDRLLSEIR---- 1061 Query: 190 SEESRRWLASCGLTVEQMQNQMDPVYTPAR-KIHLYHCDHRGLPLALVSTEGATEWCAEY 248 S W+ V Q T + +IH YH D G+P L + G W A+Y Sbjct: 1062 GARSHTWVYEDSGFVPLAQISATQGDTEEQAEIHWYHTDQAGMPRELSNRSGDICWQADY 1121 Query: 249 DEWGNLLN------EENPHQLQQLIRLPGQQYDEESGLYYNRHRYYDPLQGRYITQDPIG 302 WGN E + + Q +R GQ +D E+GL+YNR RYYDP GR+I++DP+G Sbjct: 1122 RVWGNTRQVSYAQQEADAETIHQPLRYQGQYFDGETGLHYNRFRYYDPDIGRFISRDPVG 1181 Query: 303 LKGGWNFYQYPLNPVQYIDSMGLASKYGHLNNGGYG 338 L GG N YQY NP ++D +GL H G Sbjct: 1182 LSGGMNLYQYAPNPYGWVDPLGLMKCSPHKKTTYEG 1217 Score = 62.1 bits (149), Expect = 4e-08, Method: Composition-based stats. Identities = 42/298 (14%), Positives = 75/298 (25%), Gaps = 61/298 (20%) Query: 13 YLYRYDRHGRLTEKTDLIPEGVIRTDD------------ERTHRYHYD----------SQ 50 Y +D G L D + + +Y YD + Sbjct: 562 TEYNHDDEGNLVRICDAASGIQRFSWNSVGFLLAHTDCSGSQTKYAYDKYGWLKERTDAA 621 Query: 51 HRLVHYTRTQYAEP-------LVESRYLYDPLGRRVA-------KRVWRRERDLTGWMSL 96 ++ + + +P + YD R +A W+ D M Sbjct: 622 GQMTRFHHGRDGQPLIVTQADGTTESFEYDRWRRLIAFTDAEGRATRWQLAADGLPLMRT 681 Query: 97 SRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTL 156 Q Y +D R + + Q + L+ + G + + + + Sbjct: 682 DALQQRVSYCYDNARRLALLANENGAQYHMEYDERDNLVMEQGFDGCITRYEYDAGDMLT 741 Query: 157 QQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYT 216 + D G+ D + S+RW ++ + + D V Sbjct: 742 ARREYGDSGNGSSEIRTHYQRDNAGRLLEKLVSRAGSKRW--------QRTRFRYDTVGR 793 Query: 217 PARKIHLYHCDHRGLPLALVSTEGAT------------EWCAEYDEWGNLLNEENPHQ 262 A I +H G G +YDE GN P Sbjct: 794 LAAGI-----NHGGRVELEYDAAGQLLLERSLTRGKERVLRHQYDELGNRTLSTLPDG 846 Score = 58.3 bits (139), Expect = 6e-07, Method: Composition-based stats. Identities = 39/271 (14%), Positives = 72/271 (26%), Gaps = 35/271 (12%) Query: 8 ARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVE 67 R +RYD GRL + YD+ +L+ R+ Sbjct: 779 KRWQRTRFRYDTVGRL----------AAGINHGGRVELEYDAAGQLL-LERSLTRGKERV 827 Query: 68 SRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQ 127 R+ YD LG R + + + + Q+ G R+ + + + Sbjct: 828 LRHQYDELGNRTLSTLPDGRELKSFYYGSGHRIQINL----GKRVISEISRDVLHR---- 879 Query: 128 PGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILAD 187 + G L R L GG + + +++ Sbjct: 880 --------ETRRSQGGLISEYVRDETGRLITQRASQGGKLKVAREYGWRRNGELQQMVDL 931 Query: 188 RVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDH-RGLPLALVSTEGATEWCA 246 ++ +T + + PA + D V + Sbjct: 932 NSGVHRYQYDVLGRITQA---GEERFAFDPAHNLLSAATDAPLRDNRMRVYED----KRW 984 Query: 247 EYDEWGNLLNEENPHQLQQLIRLPGQQYDEE 277 EYD GN+ + +Q + EE Sbjct: 985 EYDAHGNVTEKRIGRHTRQRFIWNAEHQLEE 1015 Score = 56.4 bits (134), Expect = 2e-06, Method: Composition-based stats. Identities = 42/297 (14%), Positives = 76/297 (25%), Gaps = 52/297 (17%) Query: 10 DAHYLYRYDRHGRLTEKTDLIPEGV------------IRTDDERTHRYHYDSQHRLVHYT 57 Y +D + LT TD + RT Y YD + T Sbjct: 453 GRQTRYEFDANHDLTGFTDASGGHTRLKLNGRGQPLKVIEPLGRTTHYRYDERGNTTAIT 512 Query: 58 RTQYAEPLVESR------------------YLYDPLGRRVAKRVWRRERDLTGWMSLSRK 99 ++ + YD +G + + Sbjct: 513 APDGQMQRIDYHPQWNLPVRITDMAGNLREFTYDVVGNLIR--------------EMDAL 558 Query: 100 PQVTWYGWDGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQS 159 ++T Y D + D + S L+ +G K +++ Sbjct: 559 GRITEYNHDDEGNLVRICDAASGIQRFSWNSVGFLLAHTDCSGSQTKYAYDKYGWLKERT 618 Query: 160 GGEDGGSVVFPPVLVQMLDRLESEILADRVSEESRRW-----LASCGLTVEQMQNQMDPV 214 + Q L +++ + + R A T Q+ P+ Sbjct: 619 DAAGQMTRFHHGRDGQPLIVTQADGTTESFEYDRWRRLIAFTDAEGRATRWQLAADGLPL 678 Query: 215 YTPA--RKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRL 269 ++ Y D+ L + GA + EYDE NL+ E+ Sbjct: 679 MRTDALQQRVSYCYDNARRLALLANENGAQ-YHMEYDERDNLVMEQGFDGCITRYEY 734 Score = 52.9 bits (125), Expect = 3e-05, Method: Composition-based stats. Identities = 40/286 (13%), Positives = 72/286 (25%), Gaps = 58/286 (20%) Query: 15 YRYD---RHGRLTEKTDLIPE----------GVIRTDDERTHRYHYDSQHRLVHYTRTQY 61 Y YD G++ + + E + R RY +D+ H L +T Sbjct: 415 YHYDRLVPEGKVLAHRNSLGEEWHFEYGQGYTRVTDVLGRQTRYEFDANHDLTGFTDASG 474 Query: 62 AEP-----------------LVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTW 104 + Y YD G A + + P Sbjct: 475 GHTRLKLNGRGQPLKVIEPLGRTTHYRYDERGNTTAITAPDGQMQRIDYHPQWNLPVRIT 534 Query: 105 YGWDGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDG 164 G+ + LIR A G + + + ++ G Sbjct: 535 -DMAGNL------------REFTYDVVGNLIREMDALGRITEYNHDDEGNLVRICDAASG 581 Query: 165 GSVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLY 224 + +L + + + + WL A ++ + Sbjct: 582 IQRFSWNSVGFLLAHTDCSGSQTKYAYDKYGWL--------------KERTDAAGQMTRF 627 Query: 225 HCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRLP 270 H G PL + +G EYD W L+ + +L Sbjct: 628 HHGRDGQPLIVTQADGT-TESFEYDRWRRLIAFTDAEGRATRWQLA 672 Score = 51.0 bits (120), Expect = 9e-05, Method: Composition-based stats. Identities = 36/275 (13%), Positives = 68/275 (24%), Gaps = 57/275 (20%) Query: 10 DAHYLYRYDRHGRLTEKTDLIPEGV------------IRTDDERTHRYHYDSQHRLVHYT 57 + Y YD++G L E+TD + + D T + YD RL+ +T Sbjct: 601 GSQTKYAYDKYGWLKERTDAAGQMTRFHHGRDGQPLIVTQADGTTESFEYDRWRRLIAFT 660 Query: 58 RTQYAEP-----------------LVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKP 100 + Y YD RR+A + + Sbjct: 661 DAEGRATRWQLAADGLPLMRTDALQQRVSYCYDNA-RRLA-------------LLANENG 706 Query: 101 QVTWYGWDGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGE-------LAKTQRRSLA 153 +D ++ T Y+ + L QR + Sbjct: 707 AQYHMEYDERDNLVMEQGFDGCITRYEYDAGDMLTARREYGDSGNGSSEIRTHYQRDNAG 766 Query: 154 DTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDP 213 L++ G + + + A+ L +E+ + Sbjct: 767 RLLEKLVSRAGSKRWQRTRFRYDTVGRLA-AGINHGGRVELEYDAAGQLLLERSLTRGK- 824 Query: 214 VYTPARKIHLYHCDHRGLPLALVSTEGATEWCAEY 248 ++ + D G +G Y Sbjct: 825 -----ERVLRHQYDELGNRTLSTLPDGRELKSFYY 854 >UniRef50_C6WJA6 YD repeat protein n=3 Tax=Actinosynnema mirum DSM 43827 RepID=C6WJA6_ACTMD Length = 1509 Score = 211 bits (538), Expect = 3e-53, Method: Composition-based stats. Identities = 78/336 (23%), Positives = 114/336 (33%), Gaps = 27/336 (8%) Query: 6 RIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPL 65 R AR YRY G L DL+ RY D R+ + ++E Sbjct: 1066 RGARVQRRDYRYRADGNLLAVDDLLAGP---------RRYELDPAGRVTSVLGSGWSEG- 1115 Query: 66 VESRYLYDPLGRRVAKRVWRRER---DLTGWMSLSRKPQVTWYGWDGDRLTTIQND--RT 120 Y YD G G + + G + Sbjct: 1116 ----YAYDRAGELTWATGPGETSGARSYAGTLIRRAGDVHFEHDAQGRVVVRAHRTLSGR 1171 Query: 121 RIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRL 180 Y + ++ T G + L + + + GG+VV V L Sbjct: 1172 ERTWRYGWDAEDRMVSATTPDGARWAYRYDGLGRRVAKERLDAGGAVVERVDFVWDGLVL 1231 Query: 181 ESEILADRVSEESRRWLASCGLTVEQMQNQ---MDPVYTPARKIHLYHCDHRGLPLALVS 237 +I A W G Q + P + H D G+P L+ Sbjct: 1232 VEQITAGTA----LTWDYEPGSHRPLTQVERVLAAPQEWVDARFHAVVSDVVGMPSELLD 1287 Query: 238 TEGATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEESGLYYNRHRYYDPLQGRYIT 297 GA W ++ WG +L E +R GQ +D E+GL+YN HRYYDP RY + Sbjct: 1288 DAGALVWRSQRTLWGAVLAELAGGPD-CPLRFAGQYHDRETGLFYNVHRYYDPETARYSS 1346 Query: 298 QDPIGLKGGWNFYQYPLNPVQYIDSMGLASKYGHLN 333 DP+GL G N + Y +NP++ D +GL+ Sbjct: 1347 PDPLGLLAGPNPHAYVVNPLRLTDPLGLSGCERARK 1382 Score = 71.8 bits (174), Expect = 6e-11, Method: Composition-based stats. Identities = 43/290 (14%), Positives = 76/290 (26%), Gaps = 34/290 (11%) Query: 9 RDAHYLYRYDRHGRLTEKTDLIPEGVIRTD------------DERTHRYHYDSQHRLVHY 56 A + YD + RLT + + D R+ Y +D+ +L Sbjct: 859 DGARLEFGYDPNLRLTSVVNARGQAWTYRYGPTGALVVETDFDGRSTTYVHDATGQLTA- 917 Query: 57 TRTQYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTT-- 114 + Y +D LGR AKR + + V+ D D L Sbjct: 918 ---KVNGAGERIAYEHDELGRLRAKRTPHGDTTYDHDPAGRLIRAVSR---DADVLVERD 971 Query: 115 -----IQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVF 169 + + + +R T TG +++ + G + + Sbjct: 972 LLGRIVAETVNGRTLRSEHDASGNRVRRVTPTGAVSEWEHDGTGRATALLAGGRRTAFGY 1031 Query: 170 PPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHR 229 ++ + +V + + R LA + D Y + Sbjct: 1032 DAAGREVQRLVGDSTRLGQVWDANHRLLAQDLTARGARVQRRDYRYRADGNLLAVDDLLA 1091 Query: 230 GLPLALVSTEGATE------WC--AEYDEWGNLLNEENPHQLQQLIRLPG 271 G + G W YD G L P + G Sbjct: 1092 GPRRYELDPAGRVTSVLGSGWSEGYAYDRAGELTWATGPGETSGARSYAG 1141 Score = 70.2 bits (170), Expect = 1e-10, Method: Composition-based stats. Identities = 71/516 (13%), Positives = 124/516 (24%), Gaps = 112/516 (21%) Query: 13 YLYRYDRHGRLTEKTDLIPEG------------VIRTDDERTHRYHYDSQHRLVHYTRTQ 60 Y YD RLTE + + + +RY YD + R + Sbjct: 549 IRYGYDAERRLTEVVNSSGAALRFSYDDDQRVVGWQDRNGMWYRYGYDDRGR---CVLNE 605 Query: 61 YAEPLVESRYLY--------DPLGRRVA--------------------KRVWRRERDLTG 92 A+ + + Y D LG R W R L Sbjct: 606 GADDYLSGTFAYLDGRTVYTDALGNRTEFHLNRAHQVVREVDAGGGVVVSEWDRHDRLLS 665 Query: 93 WMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQ-------------------PGSFTP 133 + Y DG+ + ++ D Y Sbjct: 666 RTDQLGRTTTHRYDEDGNLVALVRPDGRESTATYDAGRMPLVVEDVDGAVWRREYDPRGN 725 Query: 134 LIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPP-------VLVQMLDRLESEILA 186 L+ V +G + R + + +G + + R Sbjct: 726 LLAVTDPSGARTRFDRDERGNAVAITGPLGEVRRIDYDLAGLPVAITDAEGGRTGYRRDR 785 Query: 187 DRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWCA 246 E L S ++ ++ P + + D G P+ V GA Sbjct: 786 FGRVREVTDPLGSTTTLGWTVEGRLASRTLPDGSVERWRYDGEGNPVEHVDAAGA-VSRT 844 Query: 247 EYDEWGNLLNEENPHQLQQLIRLPGQQYDEESGLYYNRHRYYDPLQGRYITQDPIGLKGG 306 Y + P + YDP R + + +G Sbjct: 845 GYTGFDQPAWHVGPDGARLEFG-------------------YDPNL-RLTSV--VNARGQ 882 Query: 307 WNFYQYPLNP--VQYIDSMGLASKYGHLNNGGYGARPNKPPTPDPSKLPDIAKQLRLPYP 364 Y+Y V D G ++ Y H G A+ N + ++ + P Sbjct: 883 AWTYRYGPTGALVVETDFDGRSTTYVHDATGQLTAKVNGAGERIAYEHDELGRLRAKRTP 942 Query: 365 IDQASSAPNVFKTFFRALSPYDYTLYCRKWVKPNLTCTPQ-----DDSQYPGMDTKTASD 419 + + RA+S L R + + T + G + + Sbjct: 943 HGDTTYDHDPAGRLIRAVSRDADVLVERDLLGRIVAETVNGRTLRSEHDASGNRVRRVTP 1002 Query: 420 YLPQTNWP-------------TTQLPPGYTCAEPYL 442 + W + GY A + Sbjct: 1003 TGAVSEWEHDGTGRATALLAGGRRTAFGYDAAGREV 1038 Score = 62.5 bits (150), Expect = 3e-08, Method: Composition-based stats. Identities = 46/305 (15%), Positives = 76/305 (24%), Gaps = 43/305 (14%) Query: 8 ARDAHYLYRYDRHGRLTEKTDLIPEGVIRTD----------DERTHRYHYDSQHRLVHYT 57 Y +D GRL + ++ D + RT R +D+ V Sbjct: 941 TPHGDTTYDHDPAGRLIRAVSRDADVLVERDLLGRIVAETVNGRTLRSEHDASGNRVRRV 1000 Query: 58 RTQYA----------------EPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSR--- 98 A + + YD GR V + V R W + R Sbjct: 1001 TPTGAVSEWEHDGTGRATALLAGGRRTAFGYDAAGREVQRLVGDSTRLGQVWDANHRLLA 1060 Query: 99 --------KPQVTWYGWDGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRR 150 + Q Y + D +D Y+ + V + R Sbjct: 1061 QDLTARGARVQRRDYRYRADGNLLAVDDLLAGPRRYELDPAGRVTSVLGSGWSEGYAYDR 1120 Query: 151 SLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQ 210 + T GE G+ + L++ + E A S + Sbjct: 1121 AGELTWATGPGETSGARSYAGTLIRRAGDVHFEHDAQGRVVVRAHRTLSGRERTWRYGWD 1180 Query: 211 MD----PVYTPARKIHLYHCDHRGL--PLALVSTEGATEWCAEYDEWGNLLNEENPHQLQ 264 + TP Y D G + GA ++ G +L E+ Sbjct: 1181 AEDRMVSATTPDGARWAYRYDGLGRRVAKERLDAGGAVVERVDFVWDGLVLVEQITAGTA 1240 Query: 265 QLIRL 269 Sbjct: 1241 LTWDY 1245 Score = 59.1 bits (141), Expect = 4e-07, Method: Composition-based stats. Identities = 44/282 (15%), Positives = 64/282 (22%), Gaps = 31/282 (10%) Query: 10 DAHYLYRYDRHGRLTEKTDLIPEGVIRTD------------DERTHRYHYDSQHRLVHYT 57 +RYD G L T D R YD + L+ T Sbjct: 671 GRTTTHRYDEDGNLVALVRPDGRESTATYDAGRMPLVVEDVDGAVWRREYDPRGNLLAVT 730 Query: 58 RTQYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMS-------LSRKPQVTWYGWDGD 110 A +R+ D G VA E + + T Y D Sbjct: 731 DPSGA----RTRFDRDERGNAVAITGPLGEVRRIDYDLAGLPVAITDAEGGRTGYRRDRF 786 Query: 111 RLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFP 170 D T L G + + + + ++ S Sbjct: 787 GRVREVTDPLGSTTTLGWTVEGRLASRTLPDGSVERWRYDGEGNPVEHVDAAGAVSRTGY 846 Query: 171 PVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTP-------ARKIHL 223 Q + + + L S Q + Sbjct: 847 TGFDQPAWHVGPDGARLEFGYDPNLRLTSVVNARGQAWTYRYGPTGALVVETDFDGRSTT 906 Query: 224 YHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQ 265 Y D G A V+ G E+DE G L + PH Sbjct: 907 YVHDATGQLTAKVNGAGERIA-YEHDELGRLRAKRTPHGDTT 947 Score = 55.6 bits (132), Expect = 4e-06, Method: Composition-based stats. Identities = 60/400 (15%), Positives = 109/400 (27%), Gaps = 47/400 (11%) Query: 104 WYGWDGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGED 163 YG+D +R T + + + ++ + G + + G +D Sbjct: 550 RYGYDAERRLTEVVNSSGAALRFSYDDDQRVVGWQDRNGMWYRYGYDDRGRCVLNEGADD 609 Query: 164 GGSVVFPPVLVQMLDRLE----SEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPA- 218 S F + + + +E +R + R A G+ V + + Sbjct: 610 YLSGTFAYLDGRTVYTDALGNRTEFHLNRAHQVVREVDAGGGVVVSEWDRHDRLLSRTDQ 669 Query: 219 -RKIHLYHCDHRGLPLALVSTEGA--------------------TEWCAEYDEWGNLLNE 257 + + D G +ALV +G W EYD GNLL Sbjct: 670 LGRTTTHRYDEDGNLVALVRPDGRESTATYDAGRMPLVVEDVDGAVWRREYDPRGNLLAV 729 Query: 258 ENPHQLQQLI-RLPGQQYDEESGLYYNRHR-YYDPLQGRYITQDPIGLKGGW-NFYQYPL 314 +P + R +G R YD + P+ + Y Sbjct: 730 TDPSGARTRFDRDERGNAVAITGPLGEVRRIDYD------LAGLPVAITDAEGGRTGYRR 783 Query: 315 NPVQYI----DSMGLASKYGHLNNGGYGARPNKPPTPDPSKLPDIAKQLRLPYPIDQASS 370 + + D +G + G G +R + + + +D A + Sbjct: 784 DRFGRVREVTDPLGSTTTLGWTVEGRLASRTLPDGSVERWRYDGEGN---PVEHVDAAGA 840 Query: 371 APNVFKTFFRA----LSPYDYTLYCRKWVKPNLTCTPQDDSQYPGMDTKTASDYLPQTNW 426 T F + P L LT Q + +T++ Sbjct: 841 VSRTGYTGFDQPAWHVGPDGARLEFGYDPNLRLTSVVNARGQAWTYRYGPTGALVVETDF 900 Query: 427 PTTQLPPGYTCAEPYLFPDINKPDGPATAGIDDLGEILAK 466 + L +N D+LG + AK Sbjct: 901 DGRSTTYVHDATG-QLTAKVNGAGERIAYEHDELGRLRAK 939 >UniRef50_Q4ZYW6 YD repeat n=1 Tax=Pseudomonas syringae pv. syringae B728a RepID=Q4ZYW6_PSEU2 Length = 956 Score = 211 bits (538), Expect = 4e-53, Method: Composition-based stats. Identities = 58/362 (16%), Positives = 107/362 (29%), Gaps = 51/362 (14%) Query: 7 IARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDER--THRYHYDSQHRLVHYTRTQYAEP 64 + + H LY YD G +T D + + Y YDS ++L+ + + A Sbjct: 307 VKQLQHLLYDYDPVGNVTRIRDEAQPARHCSGQRIDAVNEYEYDSLYQLIRASGRETALA 366 Query: 65 LVE--------------------SRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQV-- 102 + RY YD G + + + ++ + Sbjct: 367 GIRPELPELARLPVDESQLLNYNQRYSYDDAGNLLKLIHKGAQAYTRHMIVDTKSNRALP 426 Query: 103 -----------TWYGWDGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATG-----ELAK 146 + +G++ + S LI+V+ T + Sbjct: 427 WSEGDAPPDFDKQFDANGNQQALVAGRALHW------DSGNRLIKVDAVTRSEQPEDGEH 480 Query: 147 TQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQ 206 + L+++ + + + A E A Sbjct: 481 YAYDASGQRLRKTAKAMTRTFQHQCDVRYLPGLEIRTNSATGERLEVITVYAGRTNVRCL 540 Query: 207 MQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQL 266 + P ++ DH G + + Y +G ++ Sbjct: 541 HWREGKPDAIDNNQLRYSIGDHLGSSTLELDAQAKLISHEGYYPFGGTAWWAARSAVEAS 600 Query: 267 I---RLPGQQYDEESGLYYNRHRYYDPLQGRYITQDPIGLKGGWNFYQYP-LNPVQYIDS 322 R G++ D +GLYY RYY P R+++ DP+G G N Y+ NPV +D Sbjct: 601 YKVIRYSGKERDS-TGLYYYGVRYYAPWLMRWMSADPLGDVEGLNLYRMTRNNPVSRVDP 659 Query: 323 MG 324 G Sbjct: 660 EG 661 Score = 42.1 bits (97), Expect = 0.048, Method: Composition-based stats. Identities = 35/253 (13%), Positives = 66/253 (26%), Gaps = 25/253 (9%) Query: 17 YDRHGRLTEKTDLIPEGVIRTDDERTHRYHYD-SQHRLVH-YTRTQYAEPLVESRYLYDP 74 YD HGR+ +T + +D + R+ T + L Y YDP Sbjct: 269 YDAHGRIESQT---------AGNGVISCASFDLADGRMSELITYRPGVKQLQHLLYDYDP 319 Query: 75 LGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQPG--SFT 132 +G R + + + Y +D + R +P Sbjct: 320 VGNVTRIRDEAQPARHCSGQRIDAVNE---YEYDSLYQLIRASGRETALAGIRPELPELA 376 Query: 133 PLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSEE 192 L E+ + A L + + + ++ +R D + Sbjct: 377 RLPVDESQLLNYNQRYSYDDAGNLLKLIHKGAQAYTRHMIVDTKSNRALPWSEGDAPPDF 436 Query: 193 SRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWG 252 +++ A+ Q L D + +G YD G Sbjct: 437 DKQFDANGN----QQALVAGRALHWDSGNRLIKVDAV--TRSEQPEDGE---HYAYDASG 487 Query: 253 NLLNEENPHQLQQ 265 L + + Sbjct: 488 QRLRKTAKAMTRT 500 >UniRef50_A6GBQ3 Putative uncharacterized protein n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6GBQ3_9DELT Length = 2507 Score = 211 bits (537), Expect = 4e-53, Method: Composition-based stats. Identities = 74/388 (19%), Positives = 109/388 (28%), Gaps = 66/388 (17%) Query: 9 RDAHYLYRYDRHGRLTEKTDLIPEGVIRTDD--ERTHRYHYDSQHRLVHYTRTQYAEPL- 65 R Y YD G +T+ D + V + + Y YD +RLV T ++A Sbjct: 1788 RLQDLRYHYDPVGNITDIRDHAQQTVFFQNQVVHAANSYVYDPLYRLVEATGREHASQGT 1847 Query: 66 --------------------------VESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRK 99 RY YD +G + S Sbjct: 1848 SQRTHAQLPPDGAAAPMANDPNALRRYTQRYSYDGVGNLTKVQHLPSTG--------SGW 1899 Query: 100 PQVTWYGWDGDRLTTIQNDRTRIQTIYQPG------------------------SFTPLI 135 + Y G+RL +Y ++ L Sbjct: 1900 TRHYQYATTGNRLVATSAPGDSQGPLYSDTPTYSHSYAHDAHGNLATMPHLQAMAWDELE 1959 Query: 136 RVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSEESRR 195 ++ + + GS V V ++R + E Sbjct: 1960 QLHRVEVGSQTVYCQYAGGQRVRKFVVHSGSTTEERVYVGAIERYRKRVNGQLEEEWQTL 2019 Query: 196 WLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLL 255 + L + P +H G VS GA EY +G Sbjct: 2020 HVGGA-LVETRTVLDGAAANDPTPSWRFQLSNHLGSATTEVSETGAIISHEEYHPYGTSA 2078 Query: 256 NEENPHQLQQL---IRLPGQQYDEESGLYYNRHRYYDPLQGRYITQDPIGLKGGWNFYQY 312 QL R G + DEE+GL Y+ RYY P GR+ DPIGL G N + Y Sbjct: 2079 YRMVDSQLDVPPKRYRFTGMERDEETGLSYHSARYYAPWLGRWTAADPIGLGDGVNRFAY 2138 Query: 313 P-LNPVQYIDSMGLASKYGHLNNGGYGA 339 NP ++D G A + + Sbjct: 2139 VRGNPTNFVDPTGFAGESENHIYSDQWG 2166 Score = 55.6 bits (132), Expect = 4e-06, Method: Composition-based stats. Identities = 35/222 (15%), Positives = 55/222 (24%), Gaps = 29/222 (13%) Query: 16 RYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQH-RLVHY--TRTQYAEPLVESRYLY 72 YD HGR T R + + YD RL H TRT E L + RY Y Sbjct: 1745 TYDVHGRQTRVA--------RAANATVTTHDYDPLTFRLRHILTTRTSDGERLQDLRYHY 1796 Query: 73 DPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQPGSFT 132 DP+G R ++ + Y + + T + + Sbjct: 1797 DPVGNITDIRDHAQQTVFFQNQVVHAAN-SYVYDPLYRLVEATGREHASQGTSQRTHAQL 1855 Query: 133 PLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSEE 192 P RR + + V L +++ Sbjct: 1856 PPDGAAAPMANDPNALRRY--------------TQRYSYDGVGNLTKVQHLPSTGSGWTR 1901 Query: 193 SRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHC---DHRGL 231 ++ + V + H D G Sbjct: 1902 HYQYATTGNRLVATSAPGDSQGPLYSDTPTYSHSYAHDAHGN 1943 >UniRef50_Q12LF3 YD repeat n=2 Tax=Shewanella denitrificans OS217 RepID=Q12LF3_SHEDO Length = 927 Score = 211 bits (536), Expect = 5e-53, Method: Composition-based stats. Identities = 88/360 (24%), Positives = 129/360 (35%), Gaps = 52/360 (14%) Query: 11 AHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRY 70 Y YD +G + + + ++ +++YD +RL + + Y Sbjct: 474 QQLSYAYDANGNIETINNTLFS-------RQSQQFNYDELNRLTQASGDYGSLN-----Y 521 Query: 71 LYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQ--- 127 YD + R AK + G Y D ++L + I T Sbjct: 522 AYDAVHNRTAKHALQ-----VGQAPAEVSIDSYTYAADSNQLQQVSKSAPGITTQRDFSY 576 Query: 128 -------------------PGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVV 168 + L + +A+ +L +Q++ Sbjct: 577 DANGQIITDIDDTRALTLNYNAQNRLDTLTNNALPVAQYSYNALGQRVQKNVNGKVTHFH 636 Query: 169 FPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDH 228 + + +L +E LAD R G D + ++ H DH Sbjct: 637 YD-----LNGQLIAETLADGT---LLREYFFAGRQQIATAITNDNQGSTTTYVYYVHTDH 688 Query: 229 RGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEESGLYYNRHRYY 288 G P AL + G +W A Y +G + + +++Q IR PGQ YDEESGL+YN R Y Sbjct: 689 LGTPTALTDSTGTVQWQAHYTPFGQTIVD--IDKIKQAIRFPGQYYDEESGLHYNYFRDY 746 Query: 289 DPLQGRYITQDPIGLKGGWNFYQYPL-NPVQYIDSMGLA--SKYGHLNNGGYGARPNKPP 345 DP GRYI DPIGL GG N Y Y NPV D GL G L N GY Sbjct: 747 DPELGRYIQSDPIGLAGGINTYGYAYQNPVMNTDPTGLWVPQAIGALVNMGYEGYTQYQS 806 Score = 67.9 bits (164), Expect = 8e-10, Method: Composition-based stats. Identities = 31/233 (13%), Positives = 62/233 (26%), Gaps = 20/233 (8%) Query: 11 AHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRY 70 + D G + + YD R++ ++ Sbjct: 157 ERIEFELDAAGNILSSKIKNTATNTLMYEHTRQ---YDELSRIIK----DVGAANQTTQI 209 Query: 71 LYDPLGRRVAKRVWRRERDLTGWMSLSRKPQ-------VTWYGWDGDRLTTIQNDRTRIQ 123 YD G ++ + + +L+R Q T Y ++G T D Sbjct: 210 AYDAEGNPLSLTDAKLNPTEQTFDALNRVKQLKDAKLGQTQYSYNGKDQITSVTDARGNT 269 Query: 124 TIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESE 183 T Y+ L++ + + + + L Q G V + + L E Sbjct: 270 TSYEYDGLGQLLKTTSPDTGITQFVYDEAGN-LTQKTDNKGNIVTYTFDALNRLLSAEFA 328 Query: 184 ILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALV 236 + S + + D T A Y + +G ++ Sbjct: 329 AAPELNVNYSYDSTDDDNHGLGLLTLMTDSSGTTA-----YRYNQQGQVISET 376 Score = 62.5 bits (150), Expect = 3e-08, Method: Composition-based stats. Identities = 36/276 (13%), Positives = 74/276 (26%), Gaps = 37/276 (13%) Query: 11 AHYLYRYDRHGRLTEKTDLIPEGVIRTDDERT------------HRYHYDSQHRLVHYTR 58 YD G TD +T D +Y Y+ + ++ T Sbjct: 205 QTTQIAYDAEGNPLSLTDAKLNPTEQTFDALNRVKQLKDAKLGQTQYSYNGKDQITSVTD 264 Query: 59 TQYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQND 118 + + Y YD LG+ + + S +T + +D T + D Sbjct: 265 ARGN----TTSYEYDGLGQLLK--------------TTSPDTGITQFVYDEAGNLTQKTD 306 Query: 119 RTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLD 178 Y + L+ E A + G + Sbjct: 307 NKGNIVTYTFDALNRLLSAEFAAAPELNVNYSYDSTDDDNHGLGLLTLMTDSSGTTAYRY 366 Query: 179 RLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHR-----GLPL 233 + +++++ + ++ S V QM +Y R + + + + Sbjct: 367 NQQGQVISETRNILGADYITSYQYDVNSALKQM--IYPSGRSLSYQYDNQQRLIAITTQS 424 Query: 234 ALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRL 269 A+ S Y +G + + + L Sbjct: 425 AISSQAQPLINNLSYKPFGPIASLRYGNNLTNTYNY 460 Score = 61.4 bits (147), Expect = 7e-08, Method: Composition-based stats. Identities = 44/329 (13%), Positives = 80/329 (24%), Gaps = 65/329 (19%) Query: 8 ARDAHYLYRYDRHGRL----------------TEKTDLIPEGVIRTDDERTHRYHYDSQH 51 A YDR G + T I+ T Y Y++ + Sbjct: 87 ANGGQVTLTYDRLGNILTNTVHTRLGANKTTYTYIVGTSLVQSIKNSANFTLTYSYNNAN 146 Query: 52 RLVHYTRTQYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWM-------------SLSR 98 +L + D G ++ ++ + + + Sbjct: 147 QLTSI----NGSNRERIEFELDAAGNILSSKIKNTATNTLMYEHTRQYDELSRIIKDVGA 202 Query: 99 KPQVTW--YGWDGDRLTTIQN-------------------DRTRIQTIYQPGSFTPLIRV 137 Q T Y +G+ L+ D QT Y + V Sbjct: 203 ANQTTQIAYDAEGNPLSLTDAKLNPTEQTFDALNRVKQLKDAKLGQTQYSYNGKDQITSV 262 Query: 138 ETATGELAKTQRRSLADTLQQSGGEDG-GSVVFPPVLVQMLDRLESEILADRVSEESRRW 196 A G + L L+ + + G V+ + + R Sbjct: 263 TDARGNTTSYEYDGLGQLLKTTSPDTGITQFVYDEAGNLTQKTDNKGNIVTYTFDALNRL 322 Query: 197 LASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLN 256 L++ ++ T GL + + G T + G +++ Sbjct: 323 LSAEFAAAPELNVNYSYDSTDDD------NHGLGLLTLMTDSSGTTAYRYNQQ--GQVIS 374 Query: 257 EENPHQLQQLIRLPGQQYDEESGLYYNRH 285 E I QYD S L + Sbjct: 375 ETRNILGADYI--TSYQYDVNSALKQMIY 401 Score = 59.8 bits (143), Expect = 2e-07, Method: Composition-based stats. Identities = 37/278 (13%), Positives = 76/278 (27%), Gaps = 38/278 (13%) Query: 6 RIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPL 65 RI + Y+ +G+L+ T+ + V + YD+ Y + Sbjct: 42 RIDVSDVTRFDYNSNGQLSRITNALGHKVEYQN--------YDAFG----YPQKIINANG 89 Query: 66 VESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGW-DGDRLTTIQNDRTRIQT 124 + YD LG + V R T Y + G L + Sbjct: 90 GQVTLTYDRLGNILTNTVHTR-----------LGANKTTYTYIVGTSLVQSIKNSANFTL 138 Query: 125 IYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEI 184 Y + L + + E + + + + L + + Q + Sbjct: 139 TYSYNNANQLTSINGSNRERIEFELDAAGNILSSKIKNTATNTLMYEHTRQYDELSRIIK 198 Query: 185 LADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKI-------------HLYHCDHRGL 231 ++ ++ + G + +++P + Y + + Sbjct: 199 DVGAANQTTQIAYDAEGNPLSLTDAKLNPTEQTFDALNRVKQLKDAKLGQTQYSYNGKDQ 258 Query: 232 PLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRL 269 ++ G T EYD G LL +P Sbjct: 259 ITSVTDARGNTT-SYEYDGLGQLLKTTSPDTGITQFVY 295 Score = 57.5 bits (137), Expect = 1e-06, Method: Composition-based stats. Identities = 35/228 (15%), Positives = 64/228 (28%), Gaps = 26/228 (11%) Query: 9 RDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVES 68 + YD G LT+KTD V Y +D+ +RL+ A P + Sbjct: 287 DTGITQFVYDEAGNLTQKTDNKGNIV---------TYTFDALNRLLSA--EFAAAPELNV 335 Query: 69 RYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQND-RTRIQTIYQ 127 Y YD + L M+ S Y G ++ +N T YQ Sbjct: 336 NYSYD------STDDDNHGLGLLTLMTDSSGTTAYRYNQQGQVISETRNILGADYITSYQ 389 Query: 128 PGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILAD 187 + L ++ +G Q + + + S P + Sbjct: 390 YDVNSALKQMIYPSGRSLSYQYDNQQRLIAITTQSAISSQAQPLINNLSYKPFGPIASLR 449 Query: 188 RVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLAL 235 + + + + + + + + Y D G + Sbjct: 450 YGNNLTNTYNYDLDYQLIDINSGIQQLS--------YAYDANGNIETI 489 >UniRef50_B7LTT0 Putative uncharacterized protein n=4 Tax=Enterobacteriaceae RepID=B7LTT0_ESCF3 Length = 1543 Score = 211 bits (536), Expect = 6e-53, Method: Composition-based stats. Identities = 78/348 (22%), Positives = 125/348 (35%), Gaps = 18/348 (5%) Query: 7 IARDAHYLYRYDRHGRLTEKTDLIPEGV--IRTDDERTHRYHYDSQHRLVHYTRTQYAEP 64 + Y D L + + + +R + + YD++ ++V + + Sbjct: 1080 VTPLLDSRYHRDSRDNLRRLSCQYSQTMPMLREGAPQEDEFSYDARGQVVR-----HDQD 1134 Query: 65 LVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDG-DRLTTIQNDRTRIQ 123 + YD + + ++ + Y WDG RL +N RT ++ Sbjct: 1135 GHSETFRYDAAMNGLRSGGYPPRLPDAPANQVTLGGE-FRYTWDGFGRLARRENVRTGVK 1193 Query: 124 TIYQPGSFTPLIRVE---TATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRL 180 L+ VE +L ++ G V RL Sbjct: 1194 QRMHYDDAHRLVTVEILNDRDWSRVTFSYDALGRRTEKRAWRQGAEKPERTVFEWSGMRL 1253 Query: 181 ESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEG 240 E + + ++ P +++ YH G P + ++G Sbjct: 1254 CGEHNEKSPAAHTLYLYEENSYQPLARVDRSSGGNEPWQRVLYYHTLPNGYPQCMTDSDG 1313 Query: 241 ATEWCAEYDEWGNLLNEENPHQL----QQLIRLPGQQYDEESGLYYNRHRYYDPLQGRYI 296 W A WGN+ EEN QQ +R GQ D E+GL+YN RY+ P GR+ Sbjct: 1314 GIVWRARVQLWGNIRFEENRDIYSVHPQQNLRFAGQYLDRETGLHYNTFRYFLPESGRFS 1373 Query: 297 TQDPIGLKGGWNFYQYPLNPVQYIDSMGLASKYGHLNNGGYGARPNKP 344 DPIGL GG N Y Y NP+ YID +GL G ++G Y + N Sbjct: 1374 QPDPIGLAGGLNLYAYAPNPLSYIDPLGLCKLRG--SDGRYRSAQNIQ 1419 Score = 78.3 bits (191), Expect = 5e-13, Method: Composition-based stats. Identities = 47/252 (18%), Positives = 77/252 (30%), Gaps = 23/252 (9%) Query: 17 YDRHGRLTEKTD--LIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYLYDP 74 +D G + R +R R+HYD RL H + +RY Y Sbjct: 749 HDAAGNTLHRRYNGRGQITEYRDCSDRLTRWHYDEWGRLTH----EVNAAGNITRYGYTT 804 Query: 75 LGRRVAKRVWRRERDLTGWMSLSR-------KPQVTWYGWDGDRLTTIQNDRTRIQTIYQ 127 R + +VT + + T++ D + Sbjct: 805 TDRLNTLTRPDGCTMQFAYNPAGELLRQQGFGGEVTLFTRNARGQVTLRTDPAGYPLRFS 864 Query: 128 PGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILAD 187 L R+ GE + ++++G VL +L + E+ + Sbjct: 865 YDPLGRLTRLYNEKGEAYSFEYDVRDHLIKETGLTGTEKTYQRDVLGNLLAQTETPVDGG 924 Query: 188 RVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWCAE 247 + A LT + A + YH D L ++ +GATE E Sbjct: 925 APLLTRFEYDALGRLT----------ARSTASRRTEYHHDAWQTTLRDITEDGATELRFE 974 Query: 248 YDEWGNLLNEEN 259 YD+ G L E N Sbjct: 975 YDKLGQLTAEHN 986 Score = 73.3 bits (178), Expect = 2e-11, Method: Composition-based stats. Identities = 42/286 (14%), Positives = 68/286 (23%), Gaps = 41/286 (14%) Query: 10 DAHYLYRYDRHGRLTEKTDLIPEGV-------------IRTDDERTHRYHY--------- 47 Y YD +G + TD + + + Y Y Sbjct: 668 GNTETYSYDDYGNVAVFTDALGQKTAITWLPGFSFPVKWIQPGQAVWTYDYNNAGDVLSI 727 Query: 48 -DSQHRLVHYTRTQYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYG 106 D + + V D G R + +T + S + Y Sbjct: 728 TDPLNNVTRLEWDTDGNNTVVH----DAAGN-TLHRRYNGRGQITEYRDCSDRLTRWHYD 782 Query: 107 WDGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGS 166 G RLT N I Y + L + G + + L+Q G + Sbjct: 783 EWG-RLTHEVNAAGNIT-RYGYTTTDRLNTLTRPDGCTMQFAYNPAGELLRQQGFGGEVT 840 Query: 167 VVFPPVLVQMLDRLES-----EILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPA--R 219 + Q+ R + D + +R + + + + Sbjct: 841 LFTRNARGQVTLRTDPAGYPLRFSYDPLGRLTRLYNEKGEAYSFEYDVRDHLIKETGLTG 900 Query: 220 KIHLYHCDHRGLPLALV----STEGATEWCAEYDEWGNLLNEENPH 261 Y D G LA EYD G L Sbjct: 901 TEKTYQRDVLGNLLAQTETPVDGGAPLLTRFEYDALGRLTARSTAS 946 Score = 64.4 bits (155), Expect = 1e-08, Method: Composition-based stats. Identities = 35/274 (12%), Positives = 69/274 (25%), Gaps = 29/274 (10%) Query: 11 AHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRY 70 L+R+D G++TE+TD + + ++S +L+ +T Y Sbjct: 627 GESLWRWDALGQITEQTDELGA---------VWKNVWNSSRQLLSHTDPLGN----TETY 673 Query: 71 LYDPLGRRVAKRVWRRERDLTGWMS--------LSRKPQVTWYGWDGDRLTTIQNDRTRI 122 YD G ++ W+ + V Y ++ D Sbjct: 674 SYDDYGNVAVFTDALGQKTAITWLPGFSFPVKWIQPGQAVWTYDYNNAGDVLSITDPLNN 733 Query: 123 QTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLES 182 T + + V A G + + D + ++ + + Sbjct: 734 VTRLEWDTDGNNTVVHDAAGNTLHRRYNGRGQITEYRDCSDRLTRWHYDEWGRLTHEVNA 793 Query: 183 EILADRVSEES-------RRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLAL 235 R + R ++ ++ L+ + RG Sbjct: 794 AGNITRYGYTTTDRLNTLTRPDGCTMQFAYNPAGELLRQQGFGGEVTLFTRNARGQVTLR 853 Query: 236 VSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRL 269 G YD G L N Sbjct: 854 TDPAGYPL-RFSYDPLGRLTRLYNEKGEAYSFEY 886 Score = 60.6 bits (145), Expect = 1e-07, Method: Composition-based stats. Identities = 45/323 (13%), Positives = 79/323 (24%), Gaps = 59/323 (18%) Query: 5 NRIARDAH-----YLYRYDRHGRLTEKTDLIPE------------GVIRTDDERTHRYHY 47 +I + YD GRLT + + + D T ++ Y Sbjct: 764 GQITEYRDCSDRLTRWHYDEWGRLTHEVNAAGNITRYGYTTTDRLNTLTRPDGCTMQFAY 823 Query: 48 DSQHRLVHYTR--------TQYAEPLVESR---------YLYDPLGRRVAKRVWRRERDL 90 + L+ T+ A V R + YDPLGR + E Sbjct: 824 NPAGELLRQQGFGGEVTLFTRNARGQVTLRTDPAGYPLRFSYDPLGRLTRLYNEKGEAYS 883 Query: 91 TGWMSLSRKPQVT-------WYGWD--GDRLTTIQN---DRTRIQTIYQPGSFTPLIRVE 138 + + T Y D G+ L + + T ++ + L Sbjct: 884 FEYDVRDHLIKETGLTGTEKTYQRDVLGNLLAQTETPVDGGAPLLTRFEYDALGRLTA-- 941 Query: 139 TATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSEESRRWLA 198 +T T + EDG + ++ ++ A+ R+ Sbjct: 942 RSTASRRTEYHHDAWQTTLRDITEDGAT------ELRFEYDKLGQLTAEHNHSGCYRFDH 995 Query: 199 SCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDE-WGNLLNE 257 Y H E DE + Sbjct: 996 DAPGNRTAEHFPDGRTLRH----LYYGSGHLLQTRLDSDRGSEVIAEYERDELHREIRRS 1051 Query: 258 ENPHQLQQLIRLPGQQYDEESGL 280 + + + G + SGL Sbjct: 1052 QGRLSQYRAYNICGHLTRQSSGL 1074 Score = 55.6 bits (132), Expect = 4e-06, Method: Composition-based stats. Identities = 34/283 (12%), Positives = 61/283 (21%), Gaps = 43/283 (15%) Query: 18 DRHGRLTEKTDLIPE----GVIRTDDERTHRYHY-------DSQH-------RLVHYTRT 59 D G +T + + + R Y + D R+V + Sbjct: 534 DADGNVTLRCEYGKPHGLIQALYYPGGRGSHYRWQHFAAWTDDTGDARPAHWRVVEHWIQ 593 Query: 60 QYAEPLVE----SRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTI 115 + A YL+D + + R + WD T Sbjct: 594 EGATGNTPPVRLEHYLFD----------YDVPGQSLRLVQEGRGESLWR--WDALGQITE 641 Query: 116 QNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLAD-TLQQSGGEDGGSVVFPPVLV 174 Q D S L+ G + + ++ + P Sbjct: 642 QTDELGAVWKNVWNSSRQLLSHTDPLGNTETYSYDDYGNVAVFTDALGQKTAITWLPGFS 701 Query: 175 Q-----MLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYH--CD 227 + + + +T + + + H + Sbjct: 702 FPVKWIQPGQAVWTYDYNNAGDVLSITDPLNNVTRLEWDTDGNNTVVHDAAGNTLHRRYN 761 Query: 228 HRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRLP 270 RG YDEWG L +E N Sbjct: 762 GRGQITEYRDCSDRLT-RWHYDEWGRLTHEVNAAGNITRYGYT 803 >UniRef50_D1VCV7 YD repeat protein n=1 Tax=Frankia sp. EuI1c RepID=D1VCV7_9ACTO Length = 1572 Score = 210 bits (535), Expect = 8e-53, Method: Composition-based stats. Identities = 89/413 (21%), Positives = 127/413 (30%), Gaps = 53/413 (12%) Query: 10 DAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESR 69 + Y G L E DL+ H + D+ R+ R Sbjct: 1116 LQRRDFAYTSDGYLAETDDLLAG---------VHHFELDAMRRVTAVR-----GGAWAER 1161 Query: 70 YLYDPLGRRVAKRVWRRERDLT--------GWMSLSRKPQVTWYGWDGDRLTTIQND--- 118 Y YDP G T +L R+ T Y D ++ Sbjct: 1162 YAYDPAGNLTHAAWPASVDPDTADEQGERGYDGTLIRQAGKTRYEHDAQGRIILRRQLRP 1221 Query: 119 -RTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQML 177 Y + L V T G + + + + + + G +V V Sbjct: 1222 AGETDDWRYTWDADDHLTAVTTPDGTVWQYRYDAFGRRIAKQRLSSAGDIVEQITFVWDG 1281 Query: 178 DRLESE---------ILADRVSEESRRWLASCGLTVEQMQNQMDPVYTP----------- 217 L + A + W Q++ P Sbjct: 1282 LVLAEQHHTVQAEPGETAGPSTTTVTTWDWEPNTFRPLTQSERRPTGDQASSANSRPDDP 1341 Query: 218 -----ARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQ 272 + H D G P LV +G W + WG + P +R PGQ Sbjct: 1342 DQAWYDTQFHAIVTDLIGTPTELVDPDGRLAWHSRATLWG-VSPPSTPTTTDCPLRFPGQ 1400 Query: 273 QYDEESGLYYNRHRYYDPLQGRYITQDPIGLKGGWNFYQYPLNPVQYIDSMGLASKYGHL 332 +D E+GL YN HRYYDP RY T D +GL N + Y NP+ +ID GLA L Sbjct: 1401 YHDPETGLNYNFHRYYDPATARYKTSDALGLSPAPNPWTYVTNPLTWIDPFGLAPCKDLL 1460 Query: 333 NNGGYGARPNKPPTP-DPSKLPDIAKQLRLPYPIDQASSAPNVFKTFFRALSP 384 + G P P D PD + P + AS+ +V K R + Sbjct: 1461 HAFGNAQGPRAPRLGKDFDIGPDGMIIPQEPPEVKGASTFADVTKVPVRGIYH 1513 Score = 91.8 bits (226), Expect = 5e-17, Method: Composition-based stats. Identities = 68/474 (14%), Positives = 124/474 (26%), Gaps = 85/474 (17%) Query: 13 YLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYLY 72 Y YD G+LT+ + R R+ YD R+V + E RY Y Sbjct: 568 VRYGYDATGQLTQVVNS---------SGRALRFDYDPDGRIVRWLDRNG----TEYRYTY 614 Query: 73 DPLGRRVA--------KRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQT 124 D GR V + + + VT + + D T Sbjct: 615 DATGRVVRTAGSDDYLAGTLAYDDERHVTTETNSLGHVTAHHFTDRLRPARHVDPLGRVT 674 Query: 125 IYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVF-----PPVLVQMLDR 179 + F V G + + + + + + + P++ + Sbjct: 675 AFGWDRFDNRTEVTDPLGRTIRYRYDDIGNLVTVERPDGTQTTTTWNAQRRPLVSVDANG 734 Query: 180 LESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPA--RKIHLYHCDHRGLPLALVS 237 E D + + G T ++ + ++ D GLP+A++ Sbjct: 735 ARWEREYDTRGNLAAVVDPTGGRTDLVHDDRGRLIALTDALGQLTQVETDAAGLPIAVID 794 Query: 238 TEGATEWCAEYDEWGNLLNEENPHQLQQLIRLP--GQQY-----DEESGLYYNRHRYYDP 290 GA + D G ++ +P + G D + Y YDP Sbjct: 795 PAGAVT-SWDRDALGRVVATTDPLGGVTRLSWTPEGHLTSRGRPDGATDTYR-----YDP 848 Query: 291 LQGRYITQDPIGLKGGWNFYQYPLNPVQYIDSMGLASKYGHLNNGGYGARPNKPPTPDPS 350 N V+ +D G ++ + + Sbjct: 849 E----------------------GNLVEQVDPAGFTTRTEYTH----------------- 869 Query: 351 KLPDIAKQLRLPYPIDQASSAPNVFKTFFRALSPYDYTLYCRKWVKPNLTCTPQDDSQYP 410 D+ P A + +P L D + Sbjct: 870 --FDLPTVRTSPDGSRMAFGYDTELRL-TSVTNPQGLRWSYEYDAAGQLVAETDFDGRTI 926 Query: 411 GMDTKTASDYLPQTNWPTTQLPPGYTCAEPYLFPDINKPDGPATAGIDDLGEIL 464 D A + +TN + + + PDG +T D G ++ Sbjct: 927 RYDYDAAGQLVGRTNGAGETVTFARDSGGDIV--ARSGPDGTSTFAYDATGRVV 978 Score = 80.6 bits (197), Expect = 1e-13, Method: Composition-based stats. Identities = 68/441 (15%), Positives = 102/441 (23%), Gaps = 89/441 (20%) Query: 3 PDNRIARDAH-----YLYRYDRHGRLTEK------------------------------- 26 PD RI R Y Y YD GR+ Sbjct: 595 PDGRIVRWLDRNGTEYRYTYDATGRVVRTAGSDDYLAGTLAYDDERHVTTETNSLGHVTA 654 Query: 27 ---TDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYLYDPLGRRVAKRV 83 TD + R + +D T RY YD +G V Sbjct: 655 HHFTDRLRPARHVDPLGRVTAFGWDRFDNRTEVTDPLG----RTIRYRYDDIGNLVTVER 710 Query: 84 WRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGE 143 + T W+ R + D + + + L V TG Sbjct: 711 PDGTQTTT--------------TWNAQRRPLVSVDANGARWEREYDTRGNLAAVVDPTGG 756 Query: 144 LAKTQRRSLADTLQQSGGEDGGSVVFP-----PVLVQMLDRLESEILADRVSEESRRWLA 198 + + + V P+ V + D + Sbjct: 757 RTDLVHDDRGRLIALTDALGQLTQVETDAAGLPIAVIDPAGAVTSWDRDALGRVVATTDP 816 Query: 199 SCGLTVE--QMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLN 256 G+T + + P Y D G + V G T EY + Sbjct: 817 LGGVTRLSWTPEGHLTSRGRPDGATDTYRYDPEGNLVEQVDPAGFTT-RTEYTHFDLPTV 875 Query: 257 EENPHQLQQLIRLPGQQYDEESGLYYNRHRYYDPLQGRYITQDPIGLKGGWNFYQY--PL 314 +P + D E L +P R+ Y+Y Sbjct: 876 RTSPDGSRMAFGY-----DTELRLTSVT----NPQGLRW-------------SYEYDAAG 913 Query: 315 NPVQYIDSMGLASKYGHLNNGGYGARPNKPPTPDPSKLPDIAKQLRLPYPIDQASSAPNV 374 V D G +Y + G R N + P ++ A + Sbjct: 914 QLVAETDFDGRTIRYDYDAAGQLVGRTNGAGETVTFARDSGGDIVARSGPDGTSTFAYDA 973 Query: 375 FKTFFRALSPYDYTLYCRKWV 395 RA SP L R + Sbjct: 974 TGRVVRATSPDAEVLVERDLL 994 Score = 67.9 bits (164), Expect = 9e-10, Method: Composition-based stats. Identities = 48/269 (17%), Positives = 69/269 (25%), Gaps = 69/269 (25%) Query: 9 RDAHYLYRYDRHGRLTEKTDLIP------------EGVIRTDDERTHRYHYDSQHRLVHY 56 A YRYD G L E+ D V + D + YD++ RL Sbjct: 838 DGATDTYRYDPEGNLVEQVDPAGFTTRTEYTHFDLPTVRTSPDGSRMAFGYDTELRLTSV 897 Query: 57 TRTQYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQ 116 T Q + Y YD G+ VA+ +DG Sbjct: 898 TNPQG----LRWSYEYDAAGQLVAET-----------------------DFDG------- 923 Query: 117 NDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQM 176 Y + L+ GE R S D + +SG + + + Sbjct: 924 -----RTIRYDYDAAGQLVGRTNGAGETVTFARDSGGDIVARSGPDGTSTFAY------- 971 Query: 177 LDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALV 236 D R + VE+ + D G Sbjct: 972 ----------DATGRVVRATSPDAEVLVERDLLGRVTAEICDGRRLASRYDPLGHRTRRT 1021 Query: 237 STEGATEWCAEYDEWGNLLNEENPHQLQQ 265 + GA E+D G L QL Sbjct: 1022 TPSGAI-SSWEHDPAGRPLALRTAGQLLT 1049 Score = 62.9 bits (151), Expect = 3e-08, Method: Composition-based stats. Identities = 66/487 (13%), Positives = 126/487 (25%), Gaps = 76/487 (15%) Query: 25 EKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYLYDPLGRRVAKRVW 84 ++ +P + + YD+ L + + Y + R Sbjct: 505 QRDVALPLAAVVDRNGNRIELGYDADGELAQISHSGG--------YQ-------LTVRTD 549 Query: 85 RRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGEL 144 + + + YG+D T + + + ++R G Sbjct: 550 GHRIVAVAAATAEGEQTLVRYGYDATGQLTQVVNSSGRALRFDYDPDGRIVRWLDRNGTE 609 Query: 145 AKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSEES-----RRWLAS 199 + + ++ +G +D + + + + + + R + Sbjct: 610 YRYTYDATGRVVRTAGSDDYLAGTLAYDDERHVTTETNSLGHVTAHHFTDRLRPARHVDP 669 Query: 200 CGLTVEQMQNQMDP---VYTPARKIHLYHCDHRGL---------------------PLAL 235 G ++ D V P + Y D G PL Sbjct: 670 LGRVTAFGWDRFDNRTEVTDPLGRTIRYRYDDIGNLVTVERPDGTQTTTTWNAQRRPLVS 729 Query: 236 VSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEESGLYYNRHRYYDPLQGRY 295 V GA W EYD GNL +P + + +D+ L G+ Sbjct: 730 VDANGA-RWEREYDTRGNLAAVVDPTGGRTDL-----VHDDRGRLIALTD-----ALGQL 778 Query: 296 ITQ------------DPIGLKGGWNFYQYPLNPVQYIDSMGLASKYGHLNNGGYGARPNK 343 DP G W+ V D +G L+ G ++ Sbjct: 779 TQVETDAAGLPIAVIDPAGAVTSWDRDALGR-VVATTDPLG---GVTRLSWTPEGHLTSR 834 Query: 344 PPTPDPSKLPDIAKQLRLPYPIDQAS----SAPNVFKTFFRALSPYDYTLYCRKWVKPNL 399 + + L +D A + F SP + + L Sbjct: 835 GRPDGATDTYRYDPEGNLVEQVDPAGFTTRTEYTHFDLPTVRTSPDGSRMAFGYDTELRL 894 Query: 400 TCTPQDDSQYPGMDTKTASDYLPQTNWPTTQLPPGYTCAEPYLFPDINKPDGPATAGIDD 459 T + A + +T++ + Y A L N T D Sbjct: 895 TSVTNPQGLRWSYEYDAAGQLVAETDFDGRTIRYDYDAAG-QLVGRTNGAGETVTFARDS 953 Query: 460 LGEILAK 466 G+I+A+ Sbjct: 954 GGDIVAR 960 Score = 59.4 bits (142), Expect = 3e-07, Method: Composition-based stats. Identities = 43/346 (12%), Positives = 76/346 (21%), Gaps = 100/346 (28%) Query: 9 RDAHYLYRYDRHGRLTEKTDLIPEGVI-----------RTDDERTHRYHYDSQHRLVHYT 57 Y YD G+L +T+ E V R+ + T + YD+ R+V T Sbjct: 922 DGRTIRYDYDAAGQLVGRTNGAGETVTFARDSGGDIVARSGPDGTSTFAYDATGRVVRAT 981 Query: 58 RTQYAE---------------PLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSR---- 98 YDPLG R + R Sbjct: 982 SPDAEVLVERDLLGRVTAEICDGRRLASRYDPLGHRTRRTTPSGAISSWEHDPAGRPLAL 1041 Query: 99 --KPQVTWYGWDGDR--------------------------------------------- 111 Q+ + D Sbjct: 1042 RTAGQLLTFTHDAAGHELERHLVRDAPGGAEVVLTQRWDARDQLRSQALVVGPGPAGPGP 1101 Query: 112 --LTTIQNDRTR---IQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGS 166 L T + + S L + + + ++ GG Sbjct: 1102 AGLGQPAGAGTARLLQRRDFAYTSDGYLAETDDLLAGVHHFELDAMRRVTAVRGGAWAER 1161 Query: 167 VVFPPVLVQMLDRLESEILADRVSEE--------------SRRWLASCGLTVEQMQNQMD 212 + P + + D E+ R+ + + Sbjct: 1162 YAYDPAGNLTHAAWPASVDPDTADEQGERGYDGTLIRQAGKTRYEHDAQGRIILRRQLRP 1221 Query: 213 PVYTPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEE 258 T + DH A+ + +G W YD +G + ++ Sbjct: 1222 AGETDDWRYTWDADDHL---TAVTTPDGT-VWQYRYDAFGRRIAKQ 1263 >UniRef50_A1TR18 YD repeat protein n=8 Tax=Acidovorax RepID=A1TR18_ACIAC Length = 1654 Score = 210 bits (535), Expect = 8e-53, Method: Composition-based stats. Identities = 88/345 (25%), Positives = 134/345 (38%), Gaps = 59/345 (17%) Query: 4 DNRIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAE 63 DN + + YD RL EK R R+ +D + +LV T++ Sbjct: 1211 DNLVRVYEDKRFAYDGFARLREK---------RIGRHTVQRFEWDDEDQLVAVETTRHPG 1261 Query: 64 PLVESR----YLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDR 119 +R + YD LGRR+AK+ T + W+G RL + Sbjct: 1262 TAQATRQRVEFRYDALGRRIAKQ---------------DAFGRTEFIWEGMRLIEERRGS 1306 Query: 120 TRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDR 179 + +Y+PGS+ PL R++ A G+ + S + P L+ Sbjct: 1307 KVVSYVYEPGSYVPLARID-ADGQRLEGSGHGGLVGGAGSDAAGRATSANPGTGYASLNP 1365 Query: 180 LESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTE 239 + + + Q + + ++ +H D GLP + Sbjct: 1366 MAAPGSSAAGQ-----------AASASAQTPAESRLRASAQVSYFHNDPSGLPEEVTDEA 1414 Query: 240 GATEWCAEYDEWGNLLNEE-------------------NPHQLQQLIRLPGQQYDEESGL 280 G W A + WG+ L E N L+Q +RL GQ D E+GL Sbjct: 1415 GEVRWRASWRTWGSALEERWEAVRIDGSAIPAVQQRHRNEDTLEQNLRLQGQYLDRETGL 1474 Query: 281 YYNRHRYYDPLQGRYITQDPIGLKGGWNFYQYPLNPVQYIDSMGL 325 +YN RYYDP GR+I+ DPIGL GG N +Y NP+ +ID +G Sbjct: 1475 HYNTFRYYDPDVGRFISPDPIGLAGGLNLQRYAANPISWIDPLGH 1519 Score = 83.7 bits (205), Expect = 1e-14, Method: Composition-based stats. Identities = 46/268 (17%), Positives = 68/268 (25%), Gaps = 35/268 (13%) Query: 10 DAHYLYRYD----------RHGRLTEKTDLIP---EGVIRTDDERTHRYHYDSQHRLVHY 56 A ++YD GRLT D T RY YD Q LV Sbjct: 583 GATTTFQYDDNGMQTGVVDPLGRLTRTLWDSQWFEPLRTTGPDGATWRYEYDRQGLLVQE 642 Query: 57 TRTQYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSR-------KPQVTWYGWDG 109 T +RY YD G+ V + W + T YGWDG Sbjct: 643 TAPDGG----VTRYAYDAQGQVVQIQDALGGARTLQWNERGLLVRHTDCSGRTTRYGWDG 698 Query: 110 DRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVV- 168 D QT + L + G + + ++ + + Sbjct: 699 WGQLQSVTDALGQQTQGVVDARGQLRSLRLPDGSSQGFEYDAGGRLVEHTDALSRATRYG 758 Query: 169 --FPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHC 226 L+ D EI A LA+ V + + ++ Sbjct: 759 HNVRGQLLWRRDAQGREIGAAHDGAHRLSALATENGGVYRFRYDDADRMVEEERLE---- 814 Query: 227 DHRGL-PLALVSTEGATEWCAEYDEWGN 253 G +G + G Sbjct: 815 ---GTRVGLEYDADGHVVAVVHHPARGE 839 Score = 72.9 bits (177), Expect = 3e-11, Method: Composition-based stats. Identities = 36/269 (13%), Positives = 68/269 (25%), Gaps = 30/269 (11%) Query: 9 RDAHYLYRYDRHGRLTEKTDLIPEGVIRTDD------------ERTHRYHYDSQHRLVHY 56 Y YD G++ + D + + RT RY +D +L Sbjct: 646 DGGVTRYAYDAQGQVVQIQDALGGARTLQWNERGLLVRHTDCSGRTTRYGWDGWGQLQSV 705 Query: 57 TRTQYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSR-------KPQVTWYGWDG 109 T + D G+ + R+ + + R + T YG + Sbjct: 706 TDALGQQTQGVV----DARGQLRSLRLPDGSSQGFEYDAGGRLVEHTDALSRATRYGHNV 761 Query: 110 DRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVF 169 + D + L + T G + + + D + + +G V Sbjct: 762 RGQLLWRRDAQGREIGAAHDGAHRLSALATENGGVYRFRYDDA-DRMVEEERLEGTRVGL 820 Query: 170 PPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHR 229 + + A G ++ A + D Sbjct: 821 EYDADGHVVAVVHHPARGEDVFHELETQAQEGT----LREGPAGQNAQAPRRTDLQRDAL 876 Query: 230 GLPLALVSTEGATEWCAEYDEWGNLLNEE 258 G + G + YD G L+ Sbjct: 877 G--RLVEKRVGGSVLRYRYDAGGRLVEAS 903 Score = 64.4 bits (155), Expect = 9e-09, Method: Composition-based stats. Identities = 31/233 (13%), Positives = 61/233 (26%), Gaps = 50/233 (21%) Query: 14 LYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYA-------EPLV 66 YRYD G L E + YD+ R+ R + Sbjct: 1117 QYRYDAVGELRESVHSHKGR---------TSWRYDATGRVEQVLRAGPGAQPGGGVQGRS 1167 Query: 67 ESRYLYDPLGRRVAKR----------------VWRRERDLTGWMSLSRKPQVTWYGWDGD 110 E + YDP G + +L R + + +DG Sbjct: 1168 EEVFRYDPAGNLLDASLASRMAANDGGPGGAGSPGTGSTGYLRDNLVRVYEDKRFAYDGF 1227 Query: 111 RLTTIQNDRTRIQTIYQPGSFTPLIRVET--------ATGELAKTQRRSLADTLQQSGGE 162 + ++ L+ VET AT + + + +L + + Sbjct: 1228 ARLREKRIGRHTVQRFEWDDEDQLVAVETTRHPGTAQATRQRVEFRYDALGRRIAKQDAF 1287 Query: 163 DGGSVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVY 215 ++ + ++ +R + ++ G V + D Sbjct: 1288 GRTEFIWEGM----------RLIEERRGSKVVSYVYEPGSYVPLARIDADGQR 1330 Score = 53.7 bits (127), Expect = 2e-05, Method: Composition-based stats. Identities = 41/272 (15%), Positives = 68/272 (25%), Gaps = 41/272 (15%) Query: 6 RIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRY------------HYDSQHRL 53 R+ + + YD GRL E TD + + R +D HRL Sbjct: 727 RLPDGSSQGFEYDAGGRLVEHTDALSRATRYGHNVRGQLLWRRDAQGREIGAAHDGAHRL 786 Query: 54 VHYTRTQYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLT 113 R+ YD R V + R Y DG + Sbjct: 787 SALATENGG----VYRFRYDDADRMVEEERLEGTRVGL------------EYDADGHVVA 830 Query: 114 TIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVL 173 + + ++ T G + + LQ+ + Sbjct: 831 VVHHPARGEDVFHEL--ETQAQEGTLREGPAGQNAQAPRRTDLQRDALGRLVEKRVGGSV 888 Query: 174 VQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPL 233 ++ ++ E+ RW G E + D G + Sbjct: 889 LRYRYDAGGRLV------EASRWRRQAGAQAESKADTEAETLELQHTTRF-EYDALGRIV 941 Query: 234 ALV---STEGATEW-CAEYDEWGNLLNEENPH 261 A + G E+D GN + P Sbjct: 942 AEHAQDAASGQVHTLRHEHDALGNRTRTQLPA 973 Score = 51.3 bits (121), Expect = 8e-05, Method: Composition-based stats. Identities = 33/243 (13%), Positives = 53/243 (21%), Gaps = 42/243 (17%) Query: 54 VHYTRTQYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLT 113 + E R+ +D A + W+ R Sbjct: 530 TGGWTRSTDQLGREERWQWDRWHNLTA--------------YTNAVGATWRLAWNERREL 575 Query: 114 TIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVL 173 + T +Q V G L +T S ++ G DG + + Sbjct: 576 LSCTRPSGATTTFQYDDNGMQTGVVDPLGRLTRTLWDSQWFEPLRTTGPDGATWRYEYDR 635 Query: 174 VQML------DRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPA---RKIHL- 223 +L D + D + + A G Q + V R Sbjct: 636 QGLLVQETAPDGGVTRYAYDAQGQVVQIQDALGGARTLQWNERGLLVRHTDCSGRTTRYG 695 Query: 224 --------YHCDHRG-LPLALVSTEGATEWCA---------EYDEWGNLLNEENPHQLQQ 265 D G +V G EYD G L+ + Sbjct: 696 WDGWGQLQSVTDALGQQTQGVVDARGQLRSLRLPDGSSQGFEYDAGGRLVEHTDALSRAT 755 Query: 266 LIR 268 Sbjct: 756 RYG 758 Score = 50.2 bits (118), Expect = 2e-04, Method: Composition-based stats. Identities = 48/299 (16%), Positives = 69/299 (23%), Gaps = 78/299 (26%) Query: 18 DRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLV----------- 66 D GRL EK RY YD+ RLV +R + Sbjct: 874 DALGRLVEK----------RVGGSVLRYRYDAGGRLVEASRWRRQAGAQAESKADTEAET 923 Query: 67 -----ESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTR 121 +R+ YD LGR VA+ + + G+R T Q Sbjct: 924 LELQHTTRFEYDALGRIVAEHAQDAASGQVHTL-------RHEHDALGNR-TRTQLPAVN 975 Query: 122 IQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLE 181 R A + + L Q + + Sbjct: 976 S-------------RAGRAVLRRSLNYLHYGSGHLHQINLGLAEELAQEAPQESLPGETL 1022 Query: 182 SEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRG--------LPL 233 D V E R + +E+ + + T Y D G L Sbjct: 1023 QASGLDNVLPEPVREVHRLIADIERDALHREVLRTQGTLATRYALDALGRRTGSWTRSGL 1082 Query: 234 ALVSTEGA-----------------------TEWCAEYDEWGNLLNEENPHQLQQLIRL 269 L G YD G L + H+ + R Sbjct: 1083 GLQDAAGEDWRAAWQQQVEALAQRGPSAAVGLLKQYRYDAVGELRESVHSHKGRTSWRY 1141 Score = 49.0 bits (115), Expect = 3e-04, Method: Composition-based stats. Identities = 47/292 (16%), Positives = 73/292 (25%), Gaps = 47/292 (16%) Query: 16 RYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVE----SRYL 71 RYD RL D + R R Y + RLV A P + + Y Sbjct: 380 RYDGERRLAGIADHL---------GRLLRLDYQAGTRLVAAIHLVQAAPGEQLGLLATYR 430 Query: 72 YDPLGR------RVAKRVWR-RERDLTGWMSLSRKPQVTWYGW-DGDRLTTIQNDRTRIQ 123 YD G+ R V R + Y W D + + + Sbjct: 431 YDAGGQLADVQDRTRATVRRFAYSEGLMVRQEDAAGFACHYAWEDAAQASGPERQDGARG 490 Query: 124 TIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESE 183 G RV E ++ + GG G + + Q+ + Sbjct: 491 P---DGRHLRDRRVVRHWTEDGESYAIAYGVDGSFDGGPAGETGGWTRSTDQLGREERWQ 547 Query: 184 ILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATE 243 + + + ++ P+ + D G+ +V G Sbjct: 548 WDRWHNLTAYTNAVGATWRLAWNERRELLSCTRPSGATTTFQYDDNGMQTGVVDPLGRLT 607 Query: 244 ---------------------WCAEYDEWGNLLNEENPHQLQQLIRL--PGQ 272 W EYD G L+ E P GQ Sbjct: 608 RTLWDSQWFEPLRTTGPDGATWRYEYDRQGLLVQETAPDGGVTRYAYDAQGQ 659 Score = 46.0 bits (107), Expect = 0.003, Method: Composition-based stats. Identities = 34/241 (14%), Positives = 58/241 (24%), Gaps = 10/241 (4%) Query: 6 RIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPL 65 R Y D GR T + ++ R + + V + Sbjct: 1056 RTQGTLATRYALDALGRRTG-SWTRSGLGLQDAAGEDWRAAW---QQQVEALAQRGPSAA 1111 Query: 66 VE--SRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQ 123 V +Y YD +G + R + + R QV G +Q R+ Sbjct: 1112 VGLLKQYRYDAVGELRESVHSHKGRTSWRYDATGRVEQVLRAGPGAQPGGGVQ-GRSEEV 1170 Query: 124 TIYQP--GSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLE 181 Y P + A + S ++ V Sbjct: 1171 FRYDPAGNLLDASLASRMAANDGGPGGAGSPGTGSTGYLRDNLVRVYEDKRFAYDGFARL 1230 Query: 182 SEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGA 241 E R + + W L + +++ D G +A G Sbjct: 1231 REKRIGRHTVQRFEWDDEDQLVAVETTRHPGTAQATRQRVEF-RYDALGRRIAKQDAFGR 1289 Query: 242 T 242 T Sbjct: 1290 T 1290 >UniRef50_UPI0001B4DD67 Rhs protein n=1 Tax=Streptomyces hygroscopicus ATCC 53653 RepID=UPI0001B4DD67 Length = 1730 Score = 210 bits (535), Expect = 8e-53, Method: Composition-based stats. Identities = 77/344 (22%), Positives = 107/344 (31%), Gaps = 33/344 (9%) Query: 7 IARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLV 66 Y + G L+ D Y D R+ Sbjct: 1283 TRSLLRRTYTWRPDGYLSGVEDTTAGPS---------HYTLDPVGRVTQVR-----AATW 1328 Query: 67 ESRYLYDPLGRRVAKR--VWRRERDLTGWMSLS----RKPQVTWYGWDGDRLTTIQN--- 117 + Y YDP G + D TG + + R T Y +D TT++ Sbjct: 1329 QESYAYDPAGNQAHATWPHQHPGADSTGERAYTGTQIRAAGTTRYEYDAAGRTTLRQKAR 1388 Query: 118 -DRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQM 176 R Y + L RV T G + L + G+V Sbjct: 1389 LPRKPDTWRYTWDTEDRLTRVVTPDGTTWHYRYDPLGRRTAKQRLAADGTVAEETRFTWH 1448 Query: 177 LDRL--ESEILADRVSEESRRWLASCGLTVEQMQNQ------MDPVYTPARKIHLYHCDH 228 L +S D ++ W + Q P + + D Sbjct: 1449 GATLIEQSTTSTDWTGRQNLTWDHDETGLIPLAQTTRYAPAVDTPQDEIDTRFYAIITDL 1508 Query: 229 RGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEESGLYYNRHRYY 288 G P LV G T W + WG + +R PGQ +D E+G +YN HR+Y Sbjct: 1509 VGTPTHLVDDTGHTAWQSRTTLWGTTTWNTDAAAYI-PLRFPGQYHDLETGHHYNLHRHY 1567 Query: 289 DPLQGRYITQDPIGLKGGWNFYQYPLNPVQYIDSMGLASKYGHL 332 DP RY+T DP+GL N Y NP + D GLA K Sbjct: 1568 DPETARYLTPDPLGLAPAPNPTTYVHNPHVWADPDGLAPKKPSY 1611 Score = 87.6 bits (215), Expect = 1e-15, Method: Composition-based stats. Identities = 43/247 (17%), Positives = 63/247 (25%), Gaps = 28/247 (11%) Query: 2 WPDNRIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQY 61 + +I Y YD GR T + T RY +D++ RL Sbjct: 1360 YTGTQIRAAGTTRYEYDAAGRTTLRQKARLPRKPD-----TWRYTWDTEDRLTRVVTPDG 1414 Query: 62 AEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKP------QVTWYGWDGDRLTTI 115 Y YDPLGRR AK+ + + + T W G + T Sbjct: 1415 ----TTWHYRYDPLGRRTAKQRLAADGTVAEETRFTWHGATLIEQSTTSTDWTGRQNLTW 1470 Query: 116 QNDRT-----RIQTIYQPGSFTPLIRVE-------TATGELAKTQRRSLADTLQQSGGED 163 +D T T Y P TP ++ T T QS Sbjct: 1471 DHDETGLIPLAQTTRYAPAVDTPQDEIDTRFYAIITDLVGTPTHLVDDTGHTAWQSRTTL 1530 Query: 164 GGSVVFPPVLVQMLD-RLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIH 222 G+ + + R + T + + Sbjct: 1531 WGTTTWNTDAAAYIPLRFPGQYHDLETGHHYNLHRHYDPETARYLTPDPLGLAPAPNPTT 1590 Query: 223 LYHCDHR 229 H H Sbjct: 1591 YVHNPHV 1597 Score = 74.8 bits (182), Expect = 6e-12, Method: Composition-based stats. Identities = 63/389 (16%), Positives = 101/389 (25%), Gaps = 48/389 (12%) Query: 16 RYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYLYDPL 75 YD+ GR +TD + RT + YD L R +E D Sbjct: 872 AYDQVGRTVAETDPL---------GRTTGFRYDEHGHLTAVIRPDGSEIGAVL----DAQ 918 Query: 76 GRRVAKRVWRRERDLTGWMSLSRKPQ-------VTWYGWDGDRLTTIQNDRTRIQTIYQP 128 G V + + + T Y +D D T + Sbjct: 919 GNPVQITGPGGAVWRQTFDAAGNRTSLTDPLDATTRYLYDARGGLLAVTDALGATTRVRC 978 Query: 129 GSFTPLIRVETATGELAKTQRRSLADTLQQSG-GEDGGSVVFPPVLVQML----DRLESE 183 + + G + QR +L + ++ + P + D Sbjct: 979 DGAGLPVEITDPLGATTRYQRDTLGRAVAETDPLGAITRYEWSPEGRLLRRTAPDGSAES 1038 Query: 184 ILADRVSEESRRWLASCGLTVEQMQ--NQMDPVYTPARKIHLYHCDHRGLPLALVSTEGA 241 D G + + + P H + D + + +G Sbjct: 1039 WTYDGEGNCLTHTDPVGGTAAYEYTHFDLLAARTGPDGVRHEFEHDAALRLTKVTNPQG- 1097 Query: 242 TEWCAEYDEWGNLLNEENPHQLQQLIRL-PGQQYDEESGLYYNRHRY-YDPLQGRYITQD 299 W YD G L+ E + + Q + R Y YD GR + QD Sbjct: 1098 LTWNYTYDAAGRLIAETDFDDRRVAYEHDTAGQLLSRTDPMGRRTDYTYD-ALGRLVAQD 1156 Query: 300 PIGLKGGWNFYQYPLNPVQYIDSMGLASKYGHLNNGGYGARPNKPPTPDPSKLPDIAKQL 359 G + + D G L G N+ P L + Sbjct: 1157 AAGQVSTFRW-----------DPDG-----ELLEAVGPDTELNRAYDPLGRMLSETVDGR 1200 Query: 360 RLPYPIDQASSAPNVFKTFFRALSPYDYT 388 L D A + +T A + Y Y Sbjct: 1201 TLHLAYDAAGQLTSR-RTPAGAETAYAYD 1228 Score = 70.2 bits (170), Expect = 2e-10, Method: Composition-based stats. Identities = 46/326 (14%), Positives = 72/326 (22%), Gaps = 67/326 (20%) Query: 3 PDNRIAR----DAHYLYRYDRHGRLTEKTDLIPEGVIRT------------DDERTHRYH 46 NR + DA Y YD G L TD + T RY Sbjct: 939 AGNRTSLTDPLDATTRYLYDARGGLLAVTDALGATTRVRCDGAGLPVEITDPLGATTRYQ 998 Query: 47 YDSQHRLVHYTR-----------------TQYAEPLVESRYLYDPLGRRVAKRV---WRR 86 D+ R V T + A + YD G + Sbjct: 999 RDTLGRAVAETDPLGAITRYEWSPEGRLLRRTAPDGSAESWTYDGEGNCLTHTDPVGGTA 1058 Query: 87 ERDLTGWMSLSRKPQ-------------------------VTWYGWDGDRLTTIQNDRTR 121 + T + L+ + Y +D + D Sbjct: 1059 AYEYTHFDLLAARTGPDGVRHEFEHDAALRLTKVTNPQGLTWNYTYDAAGRLIAETDFDD 1118 Query: 122 IQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQML---- 177 + Y+ + L+ G +L + Q + + P + Sbjct: 1119 RRVAYEHDTAGQLLSRTDPMGRRTDYTYDALGRLVAQDAAGQVSTFRWDPDGELLEAVGP 1178 Query: 178 DRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVS 237 D + S Q+ TPA Y D G L + Sbjct: 1179 DTELNRAYDPLGRMLSETVDGRTLHLAYDAAGQLTSRRTPAGAETAYAYDAAGNRTTLTT 1238 Query: 238 TEGATEWCAEYDEWGNLLNEENPHQL 263 +D G + L Sbjct: 1239 GGRELT--VAHDASGREIRRSWAGGL 1262 Score = 69.1 bits (167), Expect = 4e-10, Method: Composition-based stats. Identities = 69/488 (14%), Positives = 113/488 (23%), Gaps = 59/488 (12%) Query: 2 WPDNRIARDAH-----YLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHY 56 + D + + YDR GR+T TD + R Y YD+ R+ Sbjct: 762 YTDGHLTETTGSSGLPLRFVYDRAGRITSWTDT---------NNRWFSYAYDAFDRVTA- 811 Query: 57 TRTQYAEPLVESRYLYDPLG------RRVAKRVWRRERDLTGWMSLSR-------KPQVT 103 + R YD + + ++ Sbjct: 812 --ERGEGGHFTFRIGYDETDPDFPGLKITTLTSPDGAVTRYLVDEAHQVVGEIDAAGAIS 869 Query: 104 WYGWDGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSG--- 160 +D T + D T ++ L V G + + +Q +G Sbjct: 870 RTAYDQVGRTVAETDPLGRTTGFRYDEHGHLTAVIRPDGSEIGAVLDAQGNPVQITGPGG 929 Query: 161 --GEDGGSVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPA 218 + + L D A T + PV Sbjct: 930 AVWRQTFDAAGNRTSLTDPLDATTRYLYDARGGLLAVTDALGATTRVRCDGAGLPVEITD 989 Query: 219 --RKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQ---- 272 Y D G +A GA E+ G LL P + G+ Sbjct: 990 PLGATTRYQRDTLGRAVAETDPLGAIT-RYEWSPEGRLLRRTAPDGSAESWTYDGEGNCL 1048 Query: 273 -QYDEESGLYYNRHRYYDPLQGRYITQDPIGLKGGWNFYQYPLNP----VQYIDSMGLAS 327 D G + ++D L R D + +++ + + + GL Sbjct: 1049 THTDPVGGTAAYEYTHFDLLAAR-TGPDGV-------RHEFEHDAALRLTKVTNPQGLTW 1100 Query: 328 KYGHLNNGGYGARPNKPPTPDPSKLPDIAKQLRLPYPIDQASSAPNVFKTFFRALSPYDY 387 Y + G A + + D A QL + Sbjct: 1101 NYTYDAAGRLIAETDFDDR-RVAYEHDTAGQLLSRTDPMGRRTDYTYDALGRLVAQDAAG 1159 Query: 388 TLYCRKWVKPNLTCTPQDDSQYPGMDTKTASDYLPQTNWPTTQLPPGYTCAEPYLFPDIN 447 + +W L +T L Y A Sbjct: 1160 QVSTFRWDPDGELLEAVGPDTELNRAYDPLGRMLSET-VDGRTLHLAYDAAGQ--LTSRR 1216 Query: 448 KPDGPATA 455 P G TA Sbjct: 1217 TPAGAETA 1224 Score = 57.5 bits (137), Expect = 1e-06, Method: Composition-based stats. Identities = 73/490 (14%), Positives = 118/490 (24%), Gaps = 86/490 (17%) Query: 18 DRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESR---YLYDP 74 DR+G T + +R RL + R Y Y Sbjct: 711 DRNGNRITFTHDASGAPVEVLHSGGYRL------RLTSENGRITGLYAGDVRVMGYGY-- 762 Query: 75 LGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQPGSFTPL 134 + LT S P Y G R+T+ + R Y +F + Sbjct: 763 -----------TDGHLTETTGSSGLPLRFVYDRAG-RITSWTDTNNRW-FSYAYDAFDRV 809 Query: 135 IRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSEESR 194 G D + V ++D + + Sbjct: 810 TAERGEGGHFTFRIGYDETDPDFPGLKITTLTSPDGAVTRYLVDEAHQVVGEIDAAGAIS 869 Query: 195 RWLASCGLTVEQMQNQMDPVYTPARKIHLYHC-----------------DHRGLPLALVS 237 R V + + DP+ + H D +G P+ + Sbjct: 870 RTAYD---QVGRTVAETDPLGRTTGFRYDEHGHLTAVIRPDGSEIGAVLDAQGNPVQITG 926 Query: 238 TEGATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEESGLY----YNRH--RYY--- 288 GA W +D GN + +P D GL R Sbjct: 927 PGGA-VWRQTFDAAGNRTSLTDPLDATTRYLY-----DARGGLLAVTDALGATTRVRCDG 980 Query: 289 --------DP--LQGRYITQDPIGLKGGWNFYQYPLNPVQYIDSMGLASKYGHLNNGGYG 338 DP RY +D +G V D +G ++Y G Sbjct: 981 AGLPVEITDPLGATTRY-QRDTLGRA------------VAETDPLGAITRYEWSPEGRLL 1027 Query: 339 ARPNKPPTPDPSKLPDIAKQLRLPYPIDQASSAP-NVFKTFFRALSPYDYTLYCRKWVKP 397 R + + L P+ ++ F P Sbjct: 1028 RRTAPDGSAESWTYDGEGNCLTHTDPVGGTAAYEYTHFDLLAARTGPDGVRHEFEHDAAL 1087 Query: 398 NLTCTPQDDSQYPGMDTKTASDYLPQTNWPTTQLPPGYTCAEPYLFPDINKPDGPATA-G 456 LT A + +T++ ++ + A L P G T Sbjct: 1088 RLTKVTNPQGLTWNYTYDAAGRLIAETDFDDRRVAYEHDTAGQLL--SRTDPMGRRTDYT 1145 Query: 457 IDDLGEILAK 466 D LG ++A+ Sbjct: 1146 YDALGRLVAQ 1155 >UniRef50_A7FN18 RHS/YD repeat protein n=5 Tax=cellular organisms RepID=A7FN18_YERP3 Length = 1419 Score = 210 bits (534), Expect = 1e-52, Method: Composition-based stats. Identities = 95/452 (21%), Positives = 147/452 (32%), Gaps = 69/452 (15%) Query: 6 RIARDAHYLYRYDRHGRL---TEKTDLIPEGVIRTDDERTHR-YHYDSQHRLVHYTRTQY 61 R +YD GR + + + E + + R YHYD H L + Sbjct: 944 RTQGILTQQRQYDVLGRRRWQSSISSRLTEALTTPEQGILWRAYHYDELHELAAVEDSNR 1003 Query: 62 AEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSR----------------------- 98 Y YD GR + + + Sbjct: 1004 G----MLSYGYDEEGRLRSTVSPHSGQTTVHYDRADNALMLPLQTPESSPYARSSQPYCD 1059 Query: 99 ----KPQVTWYGWDGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGEL---AKTQRRS 151 + + Y +D + + + R Q Y+ L+ + + A+ + Sbjct: 1060 NRLTRWEQWQYHYDAFGNLSERLEGYRTQ-RYRYDGDNRLVGAKGDGQKGLFEAQYHYDA 1118 Query: 152 LADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQM 211 L L + G+ + RL L R E + + + Sbjct: 1119 LGRRLSKVVRTPQGN--QETHFLWQGLRL----LQSRTDESQQTYCYDPNEAYTPLA--C 1170 Query: 212 DPVYTPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENP---------HQ 262 ++ YH D G P + + +G W +Y +G + + + Q Sbjct: 1171 IERRYGEDTLYWYHTDLNGSPQEVTNAQGEMVWSGQYGVFGQVTRQTDAMWRNVSKPLGQ 1230 Query: 263 LQQLIRLPGQQYDEESGLYYNRHRYYDPLQGRYITQDPIGLKGGWNFYQYPLNPVQYIDS 322 +Q +R GQ D+E+GL+Y +RYY P GR+IT DPIGL GG N YQY NP+ +ID Sbjct: 1231 FRQPLRYAGQYLDDETGLHYTTYRYYAPEVGRFITPDPIGLAGGLNLYQYAPNPLGWIDP 1290 Query: 323 MGLASKY---GHLNNGGYGARPNKPPTPDPSKLPDIAKQLRLPYPIDQASSAPNVFKTFF 379 GLA H+ G A KP S + Q L Y S F Sbjct: 1291 WGLAGSPTTATHITYQGIDAITGKPYVGYASMQGNQIAQDVLKYRYANDFSR-------F 1343 Query: 380 RALSP---YDYTLYCRKWVKPNLTCTPQDDSQ 408 P YD K+V L ++ Sbjct: 1344 GGTPPEILYDGYGQAGKYVTRGLEQRTFENLG 1375 Score = 74.1 bits (180), Expect = 1e-11, Method: Composition-based stats. Identities = 42/261 (16%), Positives = 77/261 (29%), Gaps = 13/261 (4%) Query: 9 RDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVES 68 D Y Y Y+ G+ T+ T + E+ R YD+ RL+ ++ Sbjct: 784 DDTRYSYTYNADGQATDITQRGLSENHASPPEKPTRLTYDAVGRLIA-----RHTLTEQT 838 Query: 69 RYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQP 128 Y +D +G ++ E+ L + D T +++ Y Sbjct: 839 CYQWDKMGNLLSAIRTPTEQ----GEKLGILTNTVTFERDALGRITQEHNGAEA-LAYHY 893 Query: 129 GSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADR 188 + L R+E + + + S L + R + + R Sbjct: 894 DALGNLTRLELPNDDHFQWLHYGSGHVSAIRFNDQLVSEFERDALHRETRRTQGILTQQR 953 Query: 189 VSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWCAEY 248 + R ++ + P YH D A+ + Y Sbjct: 954 QYDVLGRRRWQSSISSRLTEALTTPE--QGILWRAYHYDELHELAAVEDSNRGML-SYGY 1010 Query: 249 DEWGNLLNEENPHQLQQLIRL 269 DE G L + +PH Q + Sbjct: 1011 DEEGRLRSTVSPHSGQTTVHY 1031 Score = 69.8 bits (169), Expect = 2e-10, Method: Composition-based stats. Identities = 44/263 (16%), Positives = 73/263 (27%), Gaps = 39/263 (14%) Query: 6 RIARDAHYLYRYDRHGRLTEKTDLIPEGVIR-------------TDDERTHRYHYDSQHR 52 R R ++D GRL TD D R +D+Q R Sbjct: 547 RSPRGHQRQCQWDELGRLVSVTDANGAETRWQYERNTDRQTFVFWPDGTQERQQWDAQGR 606 Query: 53 LVHYTRTQYAEPLVESRYLY------------DPLGRRVAKRVWRRERDLTGWMSLSRKP 100 L+ T + Y Y D LG ++ +W ++ LTG+ S +P Sbjct: 607 LLQETDRLG----QSTHYTYPHPRTLLPDSITDALG-GQSQLLWSQQGQLTGYTDCSGQP 661 Query: 101 QVTWYGWDGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSG 160 Y G L + D + + Y L +V G + ++ Sbjct: 662 TQWRYDALGQLLL--RRDALQQEIRYHWDPVGRLTKVTLPDGSTEQFDWSPAGQLVRHQQ 719 Query: 161 GEDGGS---VVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDP---- 213 G + ++ DRL I +E L + + Sbjct: 720 GHNQPRHWHYSVRGQILSTTDRLSRVIRYRYDAEGRLVHLDNDNGGQYHFNRDAEGRLLE 779 Query: 214 VYTPARKIHLYHCDHRGLPLALV 236 P + Y + G + Sbjct: 780 EQRPDDTRYSYTYNADGQATDIT 802 Score = 64.1 bits (154), Expect = 1e-08, Method: Composition-based stats. Identities = 42/305 (13%), Positives = 79/305 (25%), Gaps = 54/305 (17%) Query: 10 DAHYLYRY------------DRHGRLTEK--TDLIPEGVIRTDDERTHRYHYDSQHRLVH 55 Y Y D G ++ + + ++ YD+ +L+ Sbjct: 615 GQSTHYTYPHPRTLLPDSITDALGGQSQLLWSQQGQLTGYTDCSGQPTQWRYDALGQLL- 673 Query: 56 YTRTQYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRK-------PQVTWYGWD 108 + E RY +DP+GR + + W + Q + + Sbjct: 674 ---LRRDALQQEIRYHWDPVGRLTKVTLPDGSTEQFDWSPAGQLVRHQQGHNQPRHWHYS 730 Query: 109 GDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGG--- 165 DR Y+ + L+ ++ G R + L++ +D Sbjct: 731 VRGQILSTTDRLSRVIRYRYDAEGRLVHLDNDNGGQYHFNRDAEGRLLEEQRPDDTRYSY 790 Query: 166 SVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQM------------------ 207 + + R SE A + +R + G + + Sbjct: 791 TYNADGQATDITQRGLSENHASPPEKPTRLTYDAVGRLIARHTLTEQTCYQWDKMGNLLS 850 Query: 208 -----QNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQ 262 Q + + + D G GA YD GNL E P+ Sbjct: 851 AIRTPTEQGEKLGILTNTVTF-ERDALGRITQE--HNGAEALAYHYDALGNLTRLELPND 907 Query: 263 LQQLI 267 Sbjct: 908 DHFQW 912 Score = 45.6 bits (106), Expect = 0.004, Method: Composition-based stats. Identities = 48/343 (13%), Positives = 89/343 (25%), Gaps = 72/343 (20%) Query: 9 RDAHYLYRYD--RHGRLTEKTDLIPEGVIRTDDERTHRYH----------YDSQHRLVHY 56 Y YD RH R D I + R RY +D+ + Y Sbjct: 487 EGDGYRLAYDEERHQRTATYQDGSQAVWILDEQHRVSRYTDRTAHECQLQWDTAGQPTGY 546 Query: 57 TRTQYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQ 116 + + + D LGR V+ Y + DR T + Sbjct: 547 RSPRGHQRQCQW----DELGRLVSVTDANGAET------------RWQYERNTDRQTFVF 590 Query: 117 NDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQM 176 + Q + L++ G+ ++ D + + Sbjct: 591 WPDGTQERQ-QWDAQGRLLQETDRLGQSTHYTY-----PHPRTLLPDSITDALGGQSQLL 644 Query: 177 LDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALV 236 + S + +W + ++ + YH D G + Sbjct: 645 WSQQGQLTGYTDCSGQPTQWRYDALGQLLLRRDALQQEIR-------YHWDPVGRLTKVT 697 Query: 237 STEGATEW--------------------CAEYDEWGNLLNEENPHQLQQLIRLPGQ---- 272 +G+TE Y G +L+ + R + Sbjct: 698 LPDGSTEQFDWSPAGQLVRHQQGHNQPRHWHYSVRGQILSTTDRLSRVIRYRYDAEGRLV 757 Query: 273 QYDEESGLYYNRHRYYDPLQGRYITQDPIGLKGGWNFYQYPLN 315 D ++G Y+ +R +GR + + + Y Y N Sbjct: 758 HLDNDNGGQYHFNRD---AEGRLLEE----QRPDDTRYSYTYN 793 Score = 41.7 bits (96), Expect = 0.060, Method: Composition-based stats. Identities = 34/266 (12%), Positives = 64/266 (24%), Gaps = 46/266 (17%) Query: 4 DNR--IARDAHYLYRY---------------DRHGRLTEKTDLIPEGVIRTDDERTHRYH 46 D R I ++Y Y D G + ++ Sbjct: 339 DGRWCIRDAGEWVYHYGKFDAQGLAPLANITDNVGNRQSFHYNDQQQMVSITGTGGLSLR 398 Query: 47 YD---SQHRLVHYTRTQYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVT 103 D +HRL + ++ +RY Y+ G+ A + V Sbjct: 399 CDYHPERHRLTAVWQQTPDGDIIRARYQYNESGQLAAVQHRDDTV-------------VR 445 Query: 104 WYGWDGD-RLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGE 162 +GW D L + ++ YQ + V E + + + Sbjct: 446 RFGWGEDHGLLLWHENVAGLRCDYQWQEIDDIWCV----AEQHTCEGDGYRLAYDEERHQ 501 Query: 163 DGGSVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIH 222 + V +LD + + ++ Sbjct: 502 RTATYQDGSQAVWILDEQHRVSRYTDRTAHECQLQWDTAGQPTGYRSPRGHQRQCQW--- 558 Query: 223 LYHCDHRGLPLALVSTEG-ATEWCAE 247 D G +++ G T W E Sbjct: 559 ----DELGRLVSVTDANGAETRWQYE 580 >UniRef50_B3PHE6 RHS Repeat family n=5 Tax=cellular organisms RepID=B3PHE6_CELJU Length = 3998 Score = 209 bits (532), Expect = 2e-52, Method: Composition-based stats. Identities = 81/370 (21%), Positives = 128/370 (34%), Gaps = 35/370 (9%) Query: 10 DAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESR 69 + + YD LT + E + T Y YD+++RL R + Sbjct: 3569 GSQVNFGYDLEYNLTGQIVRKTEY-LPDGSTATFDYTYDNRYRLTEVKR----NNEIVEA 3623 Query: 70 YLYDPLGRRVAKR-----VWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQ---NDRTR 121 Y YD G R + + T L T Y +D + + D Sbjct: 3624 YGYDANGNRTLHTSVDMGITNQSATYTQGDQLQSHGNTT-YLYDANGRLGSKLKATDDGL 3682 Query: 122 IQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLE 181 T Y GS L++V+T + +L + + + L +L Sbjct: 3683 ALTTYIYGSQGQLLQVDTPDKS-IRYLHNALGNRVAKLVNGTVTEQYLWQDLTTLL---- 3737 Query: 182 SEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGA 241 + D +R+ + G T +T + + H DH G P + + G Sbjct: 3738 --AIYDGSGNLKQRFEYTLGHTP--------TSFTQNNQRYFIHTDHLGSPRIITDSNGN 3787 Query: 242 TEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEESGLYYNRHRYYDPLQGRYITQDPI 301 YD +GN++ + NP Q G D+++GL +R YDP GR+ +DPI Sbjct: 3788 IVKTVSYDSYGNIIEDSNPE-FQIPFGFAGGLKDDDTGLIRFGYRDYDPETGRWTARDPI 3846 Query: 302 GLKGG-WNFYQYP-LNPVQYIDSMGL---ASKYGHLNNGGYGARPNKPPTPDPSKLPDIA 356 G +GG N Y Y + + +ID GL S + + YG D Sbjct: 3847 GFEGGDTNLYGYVLGDAINFIDIDGLQRNTSNSWNRHQQYYGGTGMTRSQLSQQYRADQL 3906 Query: 357 KQLRLPYPID 366 KQ D Sbjct: 3907 KQWASGRNPD 3916 Score = 81.8 bits (200), Expect = 5e-14, Method: Composition-based stats. Identities = 44/294 (14%), Positives = 74/294 (25%), Gaps = 48/294 (16%) Query: 6 RIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPL 65 +++ Y YD GRLT+ + R Y YD+ L T Sbjct: 3301 QVSGLHDTHYEYDNRGRLTK----------TRTNTRAIHYAYDAFGNLSEITSADG---- 3346 Query: 66 VESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQV-------TWYGWDGDRLTTIQND 118 ++ Y YD LGR T + + +V ++G L + Sbjct: 3347 RKTHYEYDLLGRVTRITYPDGHSTQTRYDANGNATKVIVPSFAEHDMTFNGVNLVETETR 3406 Query: 119 RTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLD 178 T Y L ++ +GE L + +G + Q+ + Sbjct: 3407 PAPETTQYSYNRDRQLTEIKLPSGETLHYIY--QEGRLARLQTPEGDTHYRYQQGDQLHE 3464 Query: 179 RLES----EILADRVSEESRRWLASCGLTVEQMQNQM----DPVYTPARKIHLYHCDHR- 229 + D + + T+ N + Y Y D Sbjct: 3465 IQQGSEKVNYSYDGTLLTQQTYQGQLNATINFGYNTDFRVNNLSYAGGNTTLSYDKDGLL 3524 Query: 230 --------------GLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRL 269 GLP L + W +G + Q Sbjct: 3525 TGIHGFTIEHHPNNGLPQRLSRGQWNKNWQWN--AYGETTSVNYRWGSQVNFGY 3576 Score = 60.2 bits (144), Expect = 2e-07, Method: Composition-based stats. Identities = 38/238 (15%), Positives = 72/238 (30%), Gaps = 19/238 (7%) Query: 4 DNRIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAE 63 +++ + Y YD +GRL K +G+ Y Y SQ +L+ Sbjct: 3652 GDQLQSHGNTTYLYDANGRLGSKLKATDDGLAL------TTYIYGSQGQLLQVDTPD--- 3702 Query: 64 PLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQ 123 RYL++ LG RVAK V + W L+ + +DG + + T Sbjct: 3703 --KSIRYLHNALGNRVAKLVNGTVTEQYLWQDLTTLLAI----YDGSGNLKQRFEYTLGH 3756 Query: 124 TIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPV-LVQMLDRLES 182 T + T + S + ++ + G+++ Q+ Sbjct: 3757 TPTSFTQNNQRYFIHTDHLGSPRIITDSNGNIVKTVSYDSYGNIIEDSNPEFQIPFGFAG 3816 Query: 183 EILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEG 240 + D + T ++ Y G + + +G Sbjct: 3817 GLKDDDTGLIRFGYRDYDPETGRWTARDPIGFEGGDTNLYGYV---LGDAINFIDIDG 3871 Score = 55.2 bits (131), Expect = 5e-06, Method: Composition-based stats. Identities = 27/214 (12%), Positives = 49/214 (22%), Gaps = 40/214 (18%) Query: 54 VHYTRTQYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLT 113 T+ L ++ Y YD GR R + Y +D Sbjct: 3294 TLLTQRTQVSGLHDTHYEYDNRGRLTKTRT---------------NTRAIHYAYDAFGNL 3338 Query: 114 TIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTL--------------QQS 159 + +T Y+ + R+ G +T+ + + Sbjct: 3339 SEITSADGRKTHYEYDLLGRVTRITYPDGHSTQTRYDANGNATKVIVPSFAEHDMTFNGV 3398 Query: 160 GGEDGGSVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPAR 219 + + P +R S E+ ++ G + D Y Sbjct: 3399 NLVETETRPAPETTQYSYNRDRQLTEIKLPSGETLHYIYQEGRLARLQTPEGDTHY---- 3454 Query: 220 KIHLYHCDHR-----GLPLALVSTEGATEWCAEY 248 D G S +G Y Sbjct: 3455 --RYQQGDQLHEIQQGSEKVNYSYDGTLLTQQTY 3486 Score = 45.6 bits (106), Expect = 0.004, Method: Composition-based stats. Identities = 43/314 (13%), Positives = 74/314 (23%), Gaps = 61/314 (19%) Query: 9 RDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAE----- 63 +HY + Y G LTEK D E R HY++ RL + Sbjct: 3094 DGSHYRFNYQDGGLLTEKIDPRNERFTR---------HYNAIGRLSWSSDPMGGLWQLFD 3144 Query: 64 ---PLVESRYLYDPL-GRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQND- 118 P SRY Y R + E + +++ D L+ + Sbjct: 3145 ERLPDNTSRYGYTTAENNRHQTTRQKLENGDIQTIQVTKTGGQHTQLTSADGLSETSSAY 3204 Query: 119 --RTRIQTIYQPGSFTP------------LIRVETATGELAKTQRRSLADTLQQSGGEDG 164 T I + S P L + T A+ + TL + Sbjct: 3205 GMTTHIHYVLDEKSLRPVPNLVTVSTPSGLTNITHLTKTYAENGADTSRYTLVTENNSNT 3264 Query: 165 GSVVFPPV--------------LVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQ 210 + + + + + + Sbjct: 3265 STTQVDGRAGIHSFTSAEERSNTTYSDPQTLLTQRTQVSGLHDTHYEYDNRGRLTKTRTN 3324 Query: 211 MDPV-------------YTPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNE 257 + + + Y D G + +G + YD GN Sbjct: 3325 TRAIHYAYDAFGNLSEITSADGRKTHYEYDLLGRVTRITYPDGHST-QTRYDANGNATKV 3383 Query: 258 ENPHQLQQLIRLPG 271 P + + G Sbjct: 3384 IVPSFAEHDMTFNG 3397 >UniRef50_Q0K1I3 Insecticidal toxin complex protein n=2 Tax=Proteobacteria RepID=Q0K1I3_RALEH Length = 2644 Score = 209 bits (531), Expect = 2e-52, Method: Composition-based stats. Identities = 72/446 (16%), Positives = 131/446 (29%), Gaps = 88/446 (19%) Query: 2 WPDNRIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDER--THRYHYDSQHRLVHYTRT 59 WP + + Y YD G +T D + + + ++ Y YD+ +RL+ T Sbjct: 1955 WPG---KQVQNLHYTYDPAGNITHIQDDAQQTIYFRNKRVEPSNDYVYDALYRLIQATGR 2011 Query: 60 QYAE--------------------------------PLVESRYLYDPLGRRVAKRVWRRE 87 ++ RY+YD +G + + + Sbjct: 2012 EHLGQLASGERKPPTAPDGSNAFHTGLDHPGNGNAMGTYIERYVYDAVGNFLQMQHRGND 2071 Query: 88 RDLTGWMSL----------------------------------SRKPQVTWYGWDGDRLT 113 GW + +P+ + G+ L Sbjct: 2072 PAHPGWTRAYDYLEASLIEDGNGGALLKTRNRLTRTTLNPAGNTPQPETYLHDVHGNMLR 2131 Query: 114 TIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGG---SVVFP 170 + L + + G A + +++ + G ++ Sbjct: 2132 MPHLGGGLLGPNMHWDYKDQLRQTDLGGGGAAWYVYDASGQRVRKVWEKAPGLTEERIYL 2191 Query: 171 PVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQ----NQMDPVYTPARKIHLYHC 226 + E + + ++ + + P + I Sbjct: 2192 GGFEIFRKHVGPIDANTATLERETLHVMDDKQRIAVVETRTFDSAGGDHAPRQLIRYQFG 2251 Query: 227 DHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQ--LIRLPGQQYDEESGLYYNR 284 +H G + + EY +G+ + Q + R G++ DEESGLYY+ Sbjct: 2252 NHLGSASLELDEQAQIISYEEYAPYGSSTYQAVRSQTETAKRYRYTGKEQDEESGLYYHG 2311 Query: 285 HRYYDPLQGRYITQDPIGLKGGWNFYQYP-LNPVQYIDSMGLASKYGHLN-------NGG 336 RYY P GR+ DP G + G N YQY NP ++D G + K + G Sbjct: 2312 ARYYAPWLGRWTACDPAGEEEGPNLYQYCFGNPTGFVDPDGQSGKKLAIVMHNESKPAGK 2371 Query: 337 YGARPNKPPTPDPSKLPDIAKQLRLP 362 RP +P P + K Sbjct: 2372 ELPRPKEPIKPQKPTIKAPGKNASDK 2397 >UniRef50_UPI0001BC4026 Rhs family protein n=6 Tax=Neisseria RepID=UPI0001BC4026 Length = 1477 Score = 208 bits (530), Expect = 3e-52, Method: Composition-based stats. Identities = 78/335 (23%), Positives = 122/335 (36%), Gaps = 38/335 (11%) Query: 12 HYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYL 71 Y YDR G LT TD T + Y+ R+ + Sbjct: 937 SRNYGYDRTGNLTHTTDQRSG---------TTHFEYNKLGRIAKADSEL---------FA 978 Query: 72 YDPLGRRVAKRVWRRERDLTGWMSLS---------RKPQVTWYGWDGDRLTTIQNDRTRI 122 +DP ++ + +S R+ T + +DG T + Sbjct: 979 FDPAHNLLSTQTNNTSDSAATPLSDGLKAVSDNRIREYNGTKFFYDGFGNTIHKEHLDGT 1038 Query: 123 QTIYQPGSFTPLIRVETAT---------GELAKTQRRSLADTLQQSGGEDGGSVVFPPVL 173 F L++ ET E ++ +++ + GS+ Sbjct: 1039 TQNLYYDLFHQLVKTETFRHNPNTGGWEKETWVYDYDAMGRRIRKGSLKADGSLGEATEF 1098 Query: 174 VQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPL 233 + RL E+ + + Q+ N + + I+ +HCD G+P Sbjct: 1099 IWSGSRLLQEVYDNGRYTYIYT-DTDSYEPLAQIHNYTNEEGETHQDINYFHCDQIGIPR 1157 Query: 234 ALVSTEGATEWCAEYDEWGNLLNEEN-PHQLQQLIRLPGQQYDEESGLYYNRHRYYDPLQ 292 + +G W +YD WG L+ E N Q RL Q +D E+GL+YN RYYDP Sbjct: 1158 EMTDEDGKLLWFGKYDVWGKLVKETNITGSAHQPFRLQNQYFDRETGLHYNFFRYYDPDI 1217 Query: 293 GRYITQDPIGLKGGWNFYQYPLNPVQYIDSMGLAS 327 GR++ QDPIGL GG N Y + N + D +GL Sbjct: 1218 GRFVNQDPIGLDGGENLYGFAPNAAVWSDPLGLEP 1252 Score = 77.9 bits (190), Expect = 7e-13, Method: Composition-based stats. Identities = 36/262 (13%), Positives = 60/262 (22%), Gaps = 28/262 (10%) Query: 18 DRHGRLTEK--TDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYLYDPL 75 D GR+T ++ I D + YD +RL+ + + Y YD Sbjct: 469 DAMGRVTRYQYSNEGQVETIVRPDGAILHFDYDDCYRLIRKSDAEGRYDG----YTYDEA 524 Query: 76 GRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQPGSFTPLI 135 G + T + + + L D T Y Sbjct: 525 GNLLTHTDP--------------LKHTTRFEYADNGLLLSVTDPNGSSTAYHYNENRQPD 570 Query: 136 RVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPP-----VLVQMLDRLESEILADRVS 190 + +G + + + + L D + D Sbjct: 571 LITDCSGYETRLAYTPEGQLARITDALGQHTEYHYDADQNLTLALYPDGSKETFGYDAAG 630 Query: 191 EESRRWLASCGLTVEQMQNQMDPVYTPA--RKIHLYHCDHRGLPLALVSTEGATEWCAEY 248 T + P YH D + L + GA + Y Sbjct: 631 RLKTHTDGEGHTTSYEYGQDGLPTRRTNALGHTFGYHYDKARRLVGLTNENGA-RYRFAY 689 Query: 249 DEWGNLLNEENPHQLQQLIRLP 270 D L+ E R Sbjct: 690 DVLDRLIAESGFDHKLTGYRYN 711 Score = 70.6 bits (171), Expect = 1e-10, Method: Composition-based stats. Identities = 39/185 (21%), Positives = 56/185 (30%), Gaps = 27/185 (14%) Query: 4 DNRIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAE 63 DNRI + YD G K L D T +YD H+LV ++ Sbjct: 1010 DNRIREYNGTKFFYDGFGNTIHKEHL---------DGTTQNLYYDLFHQLVKTETFRHNP 1060 Query: 64 PLV-----ESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQND 118 Y YD +GRR+ K + + L + T + W G RL D Sbjct: 1061 NTGGWEKETWVYDYDAMGRRIRKGSLKADGSL---------GEATEFIWSGSRLLQEVYD 1111 Query: 119 RTRIQTIYQP-GSFTPLIRV---ETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLV 174 R IY S+ PL ++ GE + D + Sbjct: 1112 NGRYTYIYTDTDSYEPLAQIHNYTNEEGETHQDINYFHCDQIGIPREMTDEDGKLLWFGK 1171 Query: 175 QMLDR 179 + Sbjct: 1172 YDVWG 1176 Score = 66.0 bits (159), Expect = 3e-09, Method: Composition-based stats. Identities = 35/235 (14%), Positives = 63/235 (26%), Gaps = 34/235 (14%) Query: 12 HYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYL 71 Y G+L TD + + YHYD+ L ++ + Sbjct: 579 ETRLAYTPEGQLARITDAL---------GQHTEYHYDADQNLTLALYPDGSK----ETFG 625 Query: 72 YDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQPGSF 131 YD GR + T Y + D L T + + Y Sbjct: 626 YDAAGRLKTHT--------------DGEGHTTSYEYGQDGLPTRRTNALGHTFGYHYDKA 671 Query: 132 TPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSE 191 L+ + G + L + +SG + + +++++ E IL V Sbjct: 672 RRLVGLTNENGARYRFAYDVLDRLIAESGFDHKLTGYRYNAGNELVEQREFGILNIPVDT 731 Query: 192 ESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPL---ALVSTEGATE 243 L C + + ++H G T+G Sbjct: 732 NLSDGLNDCTPLIVNDYIRDGSGRLKHIEVHS----QNGSVQHRSYHYDTDGRLV 782 Score = 61.4 bits (147), Expect = 7e-08, Method: Composition-based stats. Identities = 38/284 (13%), Positives = 67/284 (23%), Gaps = 53/284 (18%) Query: 13 YLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRY-L 71 Y Y+ G L I D + Y ++ L+ + T A + E Y Sbjct: 348 VRYEYNSSGDLLRV--------IGRDGNVKRSFGY--KNNLM-VSHTDAAGLVSEYEYDH 396 Query: 72 YDPLG----RRVAKRVW---RRERDLTGWMSLSRKPQVTWYGW----------------- 107 Y P G R + T + + + Y + Sbjct: 397 YTPTGKVLRNRTSLGEEWRFTYHDGYTEVTDVLGRTEQYHYDYNNELTKRVFADGSAVLM 456 Query: 108 --DGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGG 165 DG D T YQ + + + G + +++S E Sbjct: 457 ERDGLGRLLSHTDAMGRVTRYQYSNEGQVETIVRPDGAILHFDYDDCYRLIRKSDAEGRY 516 Query: 166 SVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYH 225 D + + + + R+ + + V P YH Sbjct: 517 D-------GYTYDEAGNLLTHTDPLKHTTRFEYADNGLLL-------SVTDPNGSSTAYH 562 Query: 226 CDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRL 269 + P + G Y G L + Sbjct: 563 YNENRQPDLITDCSGYET-RLAYTPEGQLARITDALGQHTEYHY 605 Score = 49.8 bits (117), Expect = 2e-04, Method: Composition-based stats. Identities = 29/212 (13%), Positives = 43/212 (20%), Gaps = 15/212 (7%) Query: 41 RTHRYHYDSQHRLVHYTRTQYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKP 100 + Y D RL H + Y YD GR V Sbjct: 744 IVNDYIRDGSGRLKHIEVHSQNGSVQHRSYHYDTDGRLVRAATSGHSSAFDYNAGGDLIG 803 Query: 101 QVTWYGWDGDRLTTIQNDRTRIQT--------------IYQPGSFTPLIRVETATGELAK 146 + D Q Y S L VE G+ + Sbjct: 804 EYALRLPDAASCAAQGLPELDWQNPEHDMFLLDRSADIRYFYSSGGNLTTVELPDGQRIQ 863 Query: 147 TQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQ 206 D + + L + + R + + + + R Sbjct: 864 NLYYGSGHLHSILFDGDTVTDIEHDKLHREISRTQGALTSRYELDTLGRLKKQIAQLTAL 923 Query: 207 MQNQMDPVYTPARKIHLYHCDHRGLPLALVST 238 + YT A Y D G Sbjct: 924 TKTN-KGKYTHAAVSRNYGYDRTGNLTHTTDQ 954 Score = 46.0 bits (107), Expect = 0.003, Method: Composition-based stats. Identities = 42/336 (12%), Positives = 86/336 (25%), Gaps = 84/336 (25%) Query: 8 ARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPL-- 65 H Y YD GRL + + Y++ L+ + + Sbjct: 766 GSVQHRSYHYDTDGRLVR----------AATSGHSSAFDYNAGGDLIGEYALRLPDAASC 815 Query: 66 -----------------------VESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQV 102 + RY Y G + +R + + Sbjct: 816 AAQGLPELDWQNPEHDMFLLDRSADIRYFYSSGGNLTTVELPDGQRIQNLYYGSGHLHSI 875 Query: 103 TWYGWDGDRLT---------TIQNDRTRIQTIYQPGSFTPL-------------IRVETA 140 +DGD +T I + + + Y+ + L + + Sbjct: 876 ---LFDGDTVTDIEHDKLHREISRTQGALTSRYELDTLGRLKKQIAQLTALTKTNKGKYT 932 Query: 141 TGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSEESRRWLASC 200 +++ L + + G+ F + + + +SE+ A + + Sbjct: 933 HAAVSRNYGYDRTGNLTHTTDQRSGTTHFEYNKLGRIAKADSELFAFDPAHNLLSTQTNN 992 Query: 201 GLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENP 260 +I Y G YD +GN +++E+ Sbjct: 993 TSDSAATPLSDGLKAVSDNRIREY----NGT-------------KFFYDGFGNTIHKEHL 1035 Query: 261 HQLQQLIRLPGQQYDEESGLYYN-RHRYYDPLQGRY 295 Q + YD L R+ +P G + Sbjct: 1036 DGTTQNL-----YYDLFHQLVKTETFRH-NPNTGGW 1065 Score = 43.6 bits (101), Expect = 0.017, Method: Composition-based stats. Identities = 57/389 (14%), Positives = 96/389 (24%), Gaps = 54/389 (13%) Query: 68 SRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQ 127 RY Y+ G + + + L D + + Y+ Sbjct: 348 VRYEYNSSGDLLRVIGRDGNVKRSFGYK--------------NNLMVSHTDAAGLVSEYE 393 Query: 128 PGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQML------DRLE 181 +TP +V L + R + D + G + + L D Sbjct: 394 YDHYTPTGKVLRNRTSLGEEWRFTYHDGYTEVTDVLGRTEQYHYDYNNELTKRVFADGSA 453 Query: 182 SEILADRVSEESRRWLASCGLTVEQMQNQM--DPVYTPARKIHLYHCDHRGLPLALVSTE 239 + D + A +T Q N+ + + P I + D + E Sbjct: 454 VLMERDGLGRLLSHTDAMGRVTRYQYSNEGQVETIVRPDGAILHFDYDDCYRLIRKSDAE 513 Query: 240 GATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEESGLYYNRHRYYDPLQGRYITQ- 298 G YDE GNLL +P + ++GL ++ Sbjct: 514 GR-YDGYTYDEAGNLLTHTDPLKHTTRFEYA------DNGLL--------------LSVT 552 Query: 299 DPIGLKGGWNFYQYPLN--PVQYIDSMGLASKYGHLNNGGYGARPNK--PPTPDPSKLPD 354 DP G Y Y N P D G ++ + G + T Sbjct: 553 DP---NGSSTAYHYNENRQPDLITDCSGYETRLAYTPEGQLARITDALGQHTEYHYDADQ 609 Query: 355 IAKQLRLPYPIDQASSAPNVFKTFFRALSPYDYTLY-CRKWVKPNLTCTPQDDSQYPGMD 413 P + + T Y + P T G Sbjct: 610 NLTLALYPDGSKETFGYDAAGRLKTHTDGEGHTTSYEYGQDGLP--TRRTNALGHTFGYH 667 Query: 414 TKTASDYLPQTNWPTTQLPPGYTCAEPYL 442 A + TN + Y + + Sbjct: 668 YDKARRLVGLTNENGARYRFAYDVLDRLI 696 >UniRef50_C0EPY1 Putative uncharacterized protein n=7 Tax=Neisseria RepID=C0EPY1_NEIFL Length = 434 Score = 208 bits (529), Expect = 3e-52, Method: Composition-based stats. Identities = 71/321 (22%), Positives = 117/321 (36%), Gaps = 20/321 (6%) Query: 12 HYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYL 71 + Y YD+ G L + D Y YD R++ +Q + Sbjct: 7 NRRYAYDKAGNLIQSADQRSG---------VLHYVYDKIGRILEARNSQSGRS---ETFA 54 Query: 72 YDPLGRRVAKRVWRRERDLTGWMSLSRKPQVT--WYGWDGDRLTTIQNDRTRIQTIYQPG 129 +DP ++ + + + S +R + Y +D + Y+ Sbjct: 55 FDPAHNILSDKTAEGKGKGSNISSGNRLKEYNGIEYTYDALGNLIYRQLPNGENQYYRYD 114 Query: 130 SFTPLIRVE----TATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEIL 185 L+R E E+ + L + + P + + +L Sbjct: 115 LENQLVRAEIKKPAGNTEIWEYAYDPFGRRLSKERQDKLAWTSTDPKRTHFVW-DGTRLL 173 Query: 186 ADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWC 245 + + S +L + + E + A+ + +H D G+P + G W Sbjct: 174 QEYTYKGSYTYLYTDQDSYEPLAQVFHNNRDEAQYLAYFHNDQIGIPREMTDIRGNLLWY 233 Query: 246 AEYDEWGNLLNEENP-HQLQQLIRLPGQQYDEESGLYYNRHRYYDPLQGRYITQDPIGLK 304 EY WG L + Q RL Q YD E+GL+YN RYY+P GR+I+QDPIGL Sbjct: 234 GEYTAWGRLKKDGRVYQHAHQPFRLQNQYYDRETGLHYNYFRYYEPETGRFISQDPIGLL 293 Query: 305 GGWNFYQYPLNPVQYIDSMGL 325 G N Y + N ++D GL Sbjct: 294 GEDNLYWFGPNTAIWVDLFGL 314 Score = 100 bits (249), Expect = 1e-19, Method: Composition-based stats. Identities = 40/228 (17%), Positives = 63/228 (27%), Gaps = 16/228 (7%) Query: 4 DNRIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAE 63 NR+ Y YD G L + + Y YD +++LV + A Sbjct: 79 GNRLKEYNGIEYTYDALGNLIYRQ---------LPNGENQYYRYDLENQLVRAEIKKPAG 129 Query: 64 PLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQ 123 Y YDP GRR++K + + P+ T + WDG RL + Sbjct: 130 NTEIWEYAYDPFGRRLSKERQDKLAWTSTD------PKRTHFVWDGTRLLQEYTYKGSYT 183 Query: 124 TIYQP-GSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLES 182 +Y S+ PL +V + A+ D + Sbjct: 184 YLYTDQDSYEPLAQVFHNNRDEAQYLAYFHNDQIGIPREMTDIRGNLLWYGEYTAWGRLK 243 Query: 183 EILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRG 230 + L + E + Y D G Sbjct: 244 KDGRVYQHAHQPFRLQNQYYDRETGLHYNYFRYYEPETGRFISQDPIG 291 >UniRef50_A7K3Q8 Rhs family protein n=7 Tax=Vibrio RepID=A7K3Q8_VIBSE Length = 1384 Score = 208 bits (529), Expect = 4e-52, Method: Composition-based stats. Identities = 95/478 (19%), Positives = 158/478 (33%), Gaps = 65/478 (13%) Query: 5 NRIARDAHYLYR----YDRHGRLTEKTDLIPE-----------GVIRTDDERTHRYHYDS 49 R+++ + YD GRL E+ E I + Y YD+ Sbjct: 829 GRVSQIKTAHFNERIIYDGVGRLVEQHWPDREKKYVYNAQNRISSIIDNTAGATHYQYDA 888 Query: 50 QHRLVHYTRTQYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDG 109 +L +++ YD G ++ Y G Sbjct: 889 LGQLKRV-----NASGEVTKFEYDSFGNPTL-----PSSEVFADRIEVHDDVRFKYDAQG 938 Query: 110 DRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVF 169 ++ + + + LI V T G +++ + +L ++ + ++ Sbjct: 939 NQTKREGQGHVQTRVF---DALNQLIEVHTDDG-ISQYEYDALGRRTKKITQQGVTEFLW 994 Query: 170 PPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHR 229 E E L S + RW T + + V I+ Y CD Sbjct: 995 -----------EGERLIGERSSGAFRWYLYQPETYTPVALLENDV------IYWYQCDQV 1037 Query: 230 GLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEESGLYYNRHRYYD 289 G P L+ EG W A YD G + ++ +R GQ +D+E+ L+YN RYYD Sbjct: 1038 GKPERLIDCEGNVVWSASYDAHG--FAHVHIEKVVNPLRFQGQYFDQETNLHYNLARYYD 1095 Query: 290 PLQGRYITQDPIGLKGGWNFYQYPLNPVQYIDSMGLASKYGHLNNGGYGARPNKPPTPDP 349 P GR+I QDPI + GG N YQY +NP+Q+ID G + G A P Sbjct: 1096 PKLGRFIQQDPISIAGGINHYQYAINPIQWIDPTGFLCEEGLKRLQQMLAEYQAQNNV-P 1154 Query: 350 SKLPDIAKQLRLPYPIDQASSAPNVFKTFFRALSP--YDYTLYCRKWVKPNLTCTPQDDS 407 ++ D + + + V + Y+Y L K +T + Sbjct: 1155 QEVCDQILEAAKESSVGEDGVRSQVKIRRPDGQNHIRYEYDLERIDSQKNEITFYRHIN- 1213 Query: 408 QYPGMDTKTASDYLPQTNWPTTQLPPGYTCAEPYLFPDINKPDGPATAGIDDLGEILA 465 Y + ++ + D N+ G A +D G + Sbjct: 1214 -YSDGRKHEVHCVVKIEDFVNAHVI------------DRNEGSGIANTSLDKSGSLRI 1258 Score = 61.7 bits (148), Expect = 5e-08, Method: Composition-based stats. Identities = 27/222 (12%), Positives = 62/222 (27%), Gaps = 24/222 (10%) Query: 12 HYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYL 71 + + +D G L EK + +T R+ YD R Y Sbjct: 416 QWSFLHDEQGNLLEK---------ISPTGKTWRWQYDELGRKAQAIYPD----QSTVNYQ 462 Query: 72 YDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYG-------WDGDRLTTIQNDRTRIQT 124 Y+ G+ V+K + G+ L + + ++ D+ T Sbjct: 463 YNQHGQLVSKFHSSGKEVQYGYDGLGKLVKTVSPDGDIEKAYYNSLGQRVWDTDQFGCVT 522 Query: 125 IYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPV----LVQMLDRL 180 Y +++ E+ G+ ++ + + V D Sbjct: 523 EYDYDKHGQVVKKESEDGKKSQWWWDEQQRLIANEIDGTLLRYSYNEEDLVNGVAYPDGC 582 Query: 181 ESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIH 222 +++ D+ + + V + ++ +I Sbjct: 583 IAQLAYDQFGRRTSVRYFNDEDKVGYSEEYSYDEHSRVAQIR 624 Score = 59.8 bits (143), Expect = 2e-07, Method: Composition-based stats. Identities = 44/286 (15%), Positives = 76/286 (26%), Gaps = 50/286 (17%) Query: 9 RDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVES 68 +H Y YD+ LT+ + D + YD + +L ++S Sbjct: 647 DGSHISYEYDQQRNLTK---------LVRSDGLEFEFLYDDEGQLSGTVGFDN----LQS 693 Query: 69 RYLYDPLGRRVAKRVWRRERDLTGWMS---------LSRKPQVTWYGWD-GDRLTTIQND 118 ++ YD +GR K+V R + + + G RLT N Sbjct: 694 QFDYDDMGRIHRKQVADRTVLYRYDAAGYLKHVKAGNGSSIVENHFNYTFGGRLTFASNR 753 Query: 119 RTRIQTIY------------------QPGSFTPLIRVETATGELAKTQRRSLAD-TLQQS 159 +Q Y + + + + Sbjct: 754 HQTLQYQYSSFGHLTKRIQGQFEIAQEFNRVGQRVSQVLPDNTELNFSYDRYGRFSAIRF 813 Query: 160 GGEDGGSVVFPPVLVQMLD-----RLESEILADRVSEESR-RWLASCGLTVEQMQNQMDP 213 G D + F + + I+ D V W V QN++ Sbjct: 814 GNLDLPQIKFHYDEMGRVSQIKTAHFNERIIYDGVGRLVEQHWPDREKKYVYNAQNRISS 873 Query: 214 VYTPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEEN 259 + Y D G + + G EYD +GN + Sbjct: 874 IIDNTAGATHYQYDALGQLKRV-NASGEVT-KFEYDSFGNPTLPSS 917 Score = 59.4 bits (142), Expect = 3e-07, Method: Composition-based stats. Identities = 51/285 (17%), Positives = 83/285 (29%), Gaps = 51/285 (17%) Query: 12 HYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYL 71 + ++YD GR + D+ T Y Y+ +LV ++ E +Y Sbjct: 437 TWRWQYDELGR---------KAQAIYPDQSTVNYQYNQHGQLVS----KFHSSGKEVQYG 483 Query: 72 YDPLGRRVAKRVWRRERDLTGWMSLSRK-------PQVTWYGWD--GDRLTTIQNDRTRI 122 YD LG+ V + + + SL ++ VT Y +D G + D + Sbjct: 484 YDGLGKLVKTVSPDGDIEKAYYNSLGQRVWDTDQFGCVTEYDYDKHGQVVKKESEDGKKS 543 Query: 123 QT------------------IYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDG 164 Q Y + V G +A+ D Sbjct: 544 QWWWDEQQRLIANEIDGTLLRYSYNEEDLVNGVAYPDGCIAQLAYDQFGRRTSVRYFNDE 603 Query: 165 GSVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLY 224 V + ++I S +W A Q + V P Y Sbjct: 604 DKVGYSEEYSYDEHSRVAQIRT-PAGITSYQWGALA---------QQEAVIFPDGSHISY 653 Query: 225 HCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRL 269 D + LV ++G E+ YD+ G L LQ Sbjct: 654 EYDQQRNLTKLVRSDG-LEFEFLYDDEGQLSGTVGFDNLQSQFDY 697 Score = 57.5 bits (137), Expect = 1e-06, Method: Composition-based stats. Identities = 41/304 (13%), Positives = 81/304 (26%), Gaps = 55/304 (18%) Query: 13 YLYRYDRHGRLTEKTDLIPEGVIR-----------TDDERTHRYHYDSQHRLVHYTRTQY 61 Y YD H L T+ + TH + +D + R Sbjct: 332 TTYTYDEHDDLVSATNHLGLKEQYQYRGHLIVKRVRPTGFTHYFEWDGEGANAKCIRNVG 391 Query: 62 AEPLVESRYLY-------------------DPLGRRVAKRVWRRERDLTGWMSLSRKPQ- 101 + + R+ Y D G + K + + L RK Q Sbjct: 392 DAGIYDYRFHYQGNHSSYSDSLDHQWSFLHDEQGNLLEKISPTGKTWRWQYDELGRKAQA 451 Query: 102 ------VTWYGWDGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADT 155 Y ++ + + + Y L++ + G++ K SL Sbjct: 452 IYPDQSTVNYQYNQHGQLVSKFHSSGKEVQYGYDGLGKLVKTVSPDGDIEKAYYNSLGQR 511 Query: 156 LQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVY 215 + + F V D+ + + + +W EQ + + + Sbjct: 512 VWDTD-------QFGCVTEYDYDKHGQVVKKESEDGKKSQWWWD-----EQQRLIANEID 559 Query: 216 TPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQ-Y 274 + D +G YD++G + + + + + Y Sbjct: 560 GTLLRYSYNEEDLVNGVAY---PDGCIA-QLAYDQFGRRTSVRYFN-DEDKVGYSEEYSY 614 Query: 275 DEES 278 DE S Sbjct: 615 DEHS 618 Score = 53.7 bits (127), Expect = 2e-05, Method: Composition-based stats. Identities = 41/292 (14%), Positives = 69/292 (23%), Gaps = 50/292 (17%) Query: 16 RYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESR------ 69 +YD+ GRL E + + Y YD LV T + + R Sbjct: 312 QYDKQGRLVELLNA-------KSQKVLTTYTYDEHDDLVSATNHLGLKEQYQYRGHLIVK 364 Query: 70 ----------YLYDPLG------RRVAKR---VWRRERDLTGWMSLSRKPQVTWYGWDGD 110 + +D G R V +R + D Sbjct: 365 RVRPTGFTHYFEWDGEGANAKCIRNVGDAGIYDYRFHYQGNHSSYSDSLDHQWSFLHDEQ 424 Query: 111 RLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFP 170 + T +Q + Q + + G V + Sbjct: 425 GNLLEKISPTGKTWRWQYDELGRKAQAIYPDQSTVNYQYNQHGQLVSKFH-SSGKEVQYG 483 Query: 171 PVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRG 230 L +L + D E++ ++ Q D Y D G Sbjct: 484 YDG---LGKLVKTVSPDGDIEKAYY------NSLGQRVWDTDQFGCVTE----YDYDKHG 530 Query: 231 LPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEESGLYY 282 + S +G W L+R + D +G+ Y Sbjct: 531 QVVKKESEDGKKSQWW----WDEQQRLIANEIDGTLLRYSYNEEDLVNGVAY 578 Score = 50.2 bits (118), Expect = 2e-04, Method: Composition-based stats. Identities = 36/327 (11%), Positives = 77/327 (23%), Gaps = 84/327 (25%) Query: 13 YLYRYDRHGRLTEKTDLIPEGVIRTDDERTH----------------------------- 43 Y YD+HG++ +K + DE+ Sbjct: 522 TEYDYDKHGQVVKKESEDGKKSQWWWDEQQRLIANEIDGTLLRYSYNEEDLVNGVAYPDG 581 Query: 44 ---RYHYDSQHRLVHYTR-TQYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRK 99 + YD R + Y YD R R ++ Sbjct: 582 CIAQLAYDQFGRRTSVRYFNDEDKVGYSEEYSYDEHSRVAQIRTPAGITSYQWGALAQQE 641 Query: 100 PQVT------WYGWDGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLA 153 + Y +D R T ++ + L ++ + Sbjct: 642 AVIFPDGSHISYEYDQQRNLTKLVRSDGLEFEFLYDDEGQLSGTVGFDNLQSQFDYDDMG 701 Query: 154 DTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDP 213 ++ + + L+ + S + + G + N+ Sbjct: 702 RIHRKQVADRTVLYRYDAAGY-----LKHVKAGNGSSIVENHFNYTFGGRLTFASNRHQT 756 Query: 214 VYTPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNE-ENPHQLQQLIRLPGQ 272 + +Y +G+L + ++ Q GQ Sbjct: 757 L------------------------------QYQYSSFGHLTKRIQGQFEIAQEFNRVGQ 786 Query: 273 QYD----EESGLYYNRHRYYDPLQGRY 295 + + + L ++ RY GR+ Sbjct: 787 RVSQVLPDNTELNFSYDRY-----GRF 808 >UniRef50_A4SKJ3 Rhs family protein n=2 Tax=Bacteria RepID=A4SKJ3_AERS4 Length = 1590 Score = 207 bits (527), Expect = 6e-52, Method: Composition-based stats. Identities = 90/467 (19%), Positives = 147/467 (31%), Gaps = 59/467 (12%) Query: 3 PDNRIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYA 62 + Y+YD RL D + ++V + Sbjct: 1112 ASGAVPDTLSRHYQYDALDRLVGVNDSHWGEQGWKLNG---------NGQVVAERSKRGH 1162 Query: 63 EPLVESRYLYDP-------------LGRRVAKRVWRRE---RDLTGWMSLSRKPQVTWYG 106 E + YD G+ ++ + + E R T P Y Sbjct: 1163 ERQARL-FGYDSELNLCELSHILPSDGQPLSSQQAQAEPVRRYDTAGRVSQMGPNQYRYD 1221 Query: 107 WDGDRLTTIQN--DRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDG 164 G + + T ++ F L RV G + + + + Sbjct: 1222 KCGRLSDKVVSRPGFRPQTTQFEWDGFDRLQRVILPDGSRWRYRYDPFGRRIGKEREGQV 1281 Query: 165 G--SVVFPPVLVQMLDRLESE--ILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARK 220 + + D+L + AD + +W+ G Q + V + Sbjct: 1282 SQLTAITSVHYRWDGDQLVQQQSYRADGNTARQVQWVYEPGSFRPLAQWE---VGEQDER 1338 Query: 221 IHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENP------------HQLQQLIR 268 +H D G L S G W E WGN + P + +R Sbjct: 1339 LHYIVTDVAGTARELCSEAGDIIWRGEQRLWGNYRADAIPQPLRRFLGDAANEETYCELR 1398 Query: 269 LPGQQYDEESGLYYNRHRYYDPLQGRYITQDPIGLKGGWNFYQYPLNPVQYIDSMGLASK 328 GQ YD+E+GLYYNRHRY+DP G+YI+ DPIG GG Y NP++++D +GL Sbjct: 1399 YQGQIYDQETGLYYNRHRYFDPELGQYISPDPIGFAGGVRPQGYVHNPLEWVDPLGLKGF 1458 Query: 329 YGHLNNGGYGARPNKPPTPDPSKLPDIAKQLRLPYPIDQASSAPNVFKTFFRALSPYDYT 388 + P+ + A L P++ S SP + Sbjct: 1459 FTRTVF--------HAPSGSTHTVYQQAIDWDL--PVNTRSGVKTNLDIALDGGSP--FV 1506 Query: 389 LYCRKWVKPNLTCTPQDDSQYPGMDTKTASDYLPQTNWPTTQLPPGY 435 + K+ + NL + QD + ++N LP + Sbjct: 1507 VKNGKYSQVNLHHSKQDGLGSLFELSADTHQRYRKSNALHPHLPDAH 1553 Score = 76.0 bits (185), Expect = 3e-12, Method: Composition-based stats. Identities = 46/291 (15%), Positives = 79/291 (27%), Gaps = 43/291 (14%) Query: 6 RIARDAHYLYRY---------DRHGRLTE--KTDLIPEGVIRTDDERTHRYHYDSQHRLV 54 R + + + G+ TE + + D HRY YD RL+ Sbjct: 721 REPDGGETRFEWVNNQLAALVNPLGQRTEFERNAWGQVTCVTLPDGSAHRYGYDDAGRLL 780 Query: 55 HYTRTQYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTT 114 Y +Y Y+P G + Q + + L Sbjct: 781 AYIDPLG----QPWQYSYNPQG--------------LVEGVTNPLGQCWRHEYTPQGLLA 822 Query: 115 IQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLV 174 D ++ + G +R E A G + + + + G++V Sbjct: 823 AVTDPVGQRSQWHYGEQGLPVRYEPANGAPWRFVYDQQDRLVARYQEGEQGALVRRWEYR 882 Query: 175 Q---------MLDRLESEILADRVSEESRRWLASCGLTVEQMQ--NQMDPVYTPARKIHL 223 D ES D R A + + V P Sbjct: 883 HHARQPSKVIYEDGTESRFDYDIEGNLVRLTDALGHHHQLTYGAFDNLQSVTDPLGATTR 942 Query: 224 YHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRL--PGQ 272 YH + + +++G W E+D G + E + + R GQ Sbjct: 943 YHYNAESEFAGVTNSQGH-HWRYEFDACGRVAAEVHYDGRRYDYRYDVAGQ 992 Score = 71.8 bits (174), Expect = 5e-11, Method: Composition-based stats. Identities = 48/296 (16%), Positives = 88/296 (29%), Gaps = 44/296 (14%) Query: 3 PDNRIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDER----THRYHYDSQHRLVHYTR 58 PDNR Y YD GRL +G + R + YD+ RL+ + Sbjct: 999 PDNR-----ELHYHYDVLGRLARIEAWRAQGELNDPTARAKESETHFAYDAAARLLQAS- 1052 Query: 59 TQYAEPLVESRYLYDPLGRRVAKRVWRRE-RDLTGWMSLSRKPQVTWYGWDGDRLTTIQN 117 + +D LGR V +RV G GW L Q+ Sbjct: 1053 ----NADAVVEFEWDALGRVVCERVNGETIESHYGEAGQREAGFALSQGWSSTGLLLSQS 1108 Query: 118 -------DRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGS--VV 168 + YQ + L+ V + + + + + Sbjct: 1109 LVPASGAVPDTLSRHYQYDALDRLVGVNDSHWGEQGWKLNGNGQVVAERSKRGHERQARL 1168 Query: 169 FPPVLVQMLDRLESEILADR--------VSEESRRWLASCGLTV-----------EQMQN 209 F L L + +D +E RR+ + ++ ++ + Sbjct: 1169 FGYDSELNLCELSHILPSDGQPLSSQQAQAEPVRRYDTAGRVSQMGPNQYRYDKCGRLSD 1228 Query: 210 QMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQ 265 ++ + + D ++ +G+ W YD +G + +E Q+ Q Sbjct: 1229 KVVSRPGFRPQTTQFEWDGFDRLQRVILPDGS-RWRYRYDPFGRRIGKEREGQVSQ 1283 Score = 61.7 bits (148), Expect = 5e-08, Method: Composition-based stats. Identities = 31/148 (20%), Positives = 55/148 (37%), Gaps = 18/148 (12%) Query: 9 RDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVES 68 + H+ Y +D GR+ D R + Y YD +LV + A E Sbjct: 958 QGHHWRYEFDACGRV---------AAEVHYDGRRYDYRYDVAGQLV----LRRAPDNREL 1004 Query: 69 RYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWD-GDRLTTIQNDRTRIQTIYQ 127 Y YD LGR WR + +L + +++ + T + +D RL N + ++ Sbjct: 1005 HYHYDVLGRLARIEAWRAQGELNDPTARAKESE-THFAYDAAARLLQASNADAVV--EFE 1061 Query: 128 PGSFTPLIRVETATGELAKTQRRSLADT 155 + ++ E GE ++ Sbjct: 1062 WDALGRVV-CERVNGETIESHYGEAGQR 1088 Score = 58.7 bits (140), Expect = 4e-07, Method: Composition-based stats. Identities = 37/256 (14%), Positives = 62/256 (24%), Gaps = 40/256 (15%) Query: 14 LYRYDRHGRLTEKTDLIPE--GVIRTDDERTHRY----------HYDSQHRLVHYTRTQY 61 Y YD G L + R+ YDSQ R + Sbjct: 623 RYEYDDSGALLRVRAGAGRSFDYQYSPQGWLTRWNDLAQTWVEHDYDSQGR---CLANRC 679 Query: 62 AEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRK--------PQVTWYGWDGDRLT 113 A + + YD + T + W ++L Sbjct: 680 AGGYWKDHFSYDDA-NLTSYYHSAFGGVTAYVRDERNNILLRREPDGGETRFEWVNNQLA 738 Query: 114 TIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVL 173 + N +T ++ ++ + V G + L Sbjct: 739 ALVNP-LGQRTEFERNAWGQVTCVTLPDGSAHRYGYDDAGRLLAYID------------- 784 Query: 174 VQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPL 233 + + + E L C Q + V P + +H +GLP+ Sbjct: 785 -PLGQPWQYSYNPQGLVEGVTNPLGQCWRHEYTPQGLLAAVTDPVGQRSQWHYGEQGLPV 843 Query: 234 ALVSTEGATEWCAEYD 249 GA W YD Sbjct: 844 RYEPANGAP-WRFVYD 858 Score = 57.9 bits (138), Expect = 8e-07, Method: Composition-based stats. Identities = 37/284 (13%), Positives = 73/284 (25%), Gaps = 37/284 (13%) Query: 18 DRHGRLTE--KTDLIPEGVIRTDDERTHRYHYDSQHRLV-------------HYTRTQYA 62 D G+ ++ + + R+ YD Q RLV + +A Sbjct: 826 DPVGQRSQWHYGEQGLPVRYEPANGAPWRFVYDQQDRLVARYQEGEQGALVRRWEYRHHA 885 Query: 63 --------EPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRK-------PQVTWYGW 107 E ESR+ YD G V + + T Y + Sbjct: 886 RQPSKVIYEDGTESRFDYDIEGNLVRLTDALGHHHQLTYGAFDNLQSVTDPLGATTRYHY 945 Query: 108 DGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSV 167 + + + Y+ + + G + + + D + Sbjct: 946 NAESEFAGVTNSQGHHWRYEFDACGRVAAEVHYDGRRYDYRYDVAGQLVLR-RAPDNREL 1004 Query: 168 VFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCD 227 + ++ L R+E+ +++ + R S ++ + D Sbjct: 1005 HYHYDVLGRLARIEAWRAQGELNDPTARAKESETHFAYDAAARLLQASNADAVVEF-EWD 1063 Query: 228 HRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRLPG 271 G + G T +G E L Q G Sbjct: 1064 ALGRVVCE-RVNGETIESH----YGEAGQREAGFALSQGWSSTG 1102 Score = 45.6 bits (106), Expect = 0.004, Method: Composition-based stats. Identities = 39/300 (13%), Positives = 71/300 (23%), Gaps = 49/300 (16%) Query: 74 PLGR--RVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQPGSF 131 GR RV+ + +++ Y +D YQ Sbjct: 591 ADGRHIRVSHQGRNVSALTLVVSEFDPPRELSRYEYDDSGALLRVRAGAGRSFDYQYSPQ 650 Query: 132 TPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSE 191 L R + S L + L S + Sbjct: 651 GWLTRWNDLAQTWVEHDYDSQGRCLANRCAGG----YWKDHFSYDDANLTSYYHSAFGGV 706 Query: 192 ESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEW 251 + + + + + + + + ALV+ G + W Sbjct: 707 TAYVRDERNNILLRREPDGGETRFEW-------VNNQL---AALVNPLGQRTEFER-NAW 755 Query: 252 GNLLNEENPHQLQQLIRLPGQQYDEESGLYYNRHRY-YDPLQGRYIT-QDPIGLKGGWNF 309 G + P HRY YD GR + DP+G Sbjct: 756 GQVTCVTLPDGSA--------------------HRYGYD-DAGRLLAYIDPLGQ-----P 789 Query: 310 YQYPLNPVQYI----DSMGLASKYGHLNNGGYGARPNKPPTPDPSKLPDIAKQLRLPYPI 365 +QY NP + + +G ++ + G A + + +R Sbjct: 790 WQYSYNPQGLVEGVTNPLGQCWRHEYTPQGLLAAVTDPVGQRSQWHYGEQGLPVRYEPAN 849 >UniRef50_B4ETQ2 Rhs-family protein n=9 Tax=Enterobacteriaceae RepID=B4ETQ2_PROMH Length = 1703 Score = 207 bits (527), Expect = 6e-52, Method: Composition-based stats. Identities = 79/376 (21%), Positives = 123/376 (32%), Gaps = 62/376 (16%) Query: 12 HYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYL 71 H Y+YDR + D R RYHY++ ++ + + ++ Sbjct: 1199 HRSYQYDRAYNVVGIEDDRW---------RQTRYHYNANDQITETQYS-PQWGNQDEKFQ 1248 Query: 72 YDPLGRRVAKRVWRRER-----------DLTGWMSLSRKPQVTW------YGWDGDRLTT 114 YD L R + Y +D + Sbjct: 1249 YDNNLNITEHLTTPSSSMVPSEAQGAMLQLFQQQQAGRVTRRYTAKGYQDYHYDVNGRLA 1308 Query: 115 IQNDRTR----IQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDG------ 164 + TR + Y + L T G+ + L ++ D Sbjct: 1309 KKIVHTRGFRPREWRYLWNTQNQLTACFTPKGDCWHYTYDAFGRRLSKTKTVDSDLAHID 1368 Query: 165 ----------GSVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPV 214 + + Q+++ + + +WL G + Q Sbjct: 1369 PLFPQIKPKITTWRYLWSGDQLIEETPIYADGTLANAQQVQWLYQPGEITPTARYQQ--- 1425 Query: 215 YTPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNL--------LNEENPHQLQQL 266 K+H DH+G P + S G W + WG + E +P+ + Sbjct: 1426 ----GKLHYVVTDHQGTPREIFSEGGQASWAGRLNTWGQMQFWRYRDGKAENDPNYTECP 1481 Query: 267 IRLPGQQYDEESGLYYNRHRYYDPLQGRYITQDPIGLKGGWNFYQYPLNPVQYIDSMGLA 326 R GQ DEESGLYYNR RYYD G+Y++ DPIGL GG N Y Y P ++D GLA Sbjct: 1482 FRFAGQYEDEESGLYYNRFRYYDRETGQYLSPDPIGLLGGLNPYGYVHCPTGWVDPFGLA 1541 Query: 327 SKYGHLNNGGYGARPN 342 G+ + N Sbjct: 1542 GGKGNKGAPVTSSFIN 1557 Score = 71.0 bits (172), Expect = 1e-10, Method: Composition-based stats. Identities = 50/281 (17%), Positives = 80/281 (28%), Gaps = 41/281 (14%) Query: 6 RIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPL 65 R + Y YD +GRL +K R R RY +++Q++L + Sbjct: 1290 RYTAKGYQDYHYDVNGRLAKKI-----VHTRGFRPREWRYLWNTQNQLTACFTPKGD--- 1341 Query: 66 VESRYLYDPLGRRVAKRVWRRERDLTGWMSLSR---KPQVTWYGWDGDRLTTIQ------ 116 Y YD GRR++K + K Y W GD+L Sbjct: 1342 -CWHYTYDAFGRRLSKTKTVDSDLAHIDPLFPQIKPKITTWRYLWSGDQLIEETPIYADG 1400 Query: 117 --NDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGG---EDGGSVVFPP 171 + ++Q +YQPG TP R + T + + GG G + Sbjct: 1401 TLANAQQVQWLYQPGEITPTARYQQGKLHYVVTDHQGTPREIFSEGGQASWAGRLNTWGQ 1460 Query: 172 VLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGL 231 + ++E + R N+ + D GL Sbjct: 1461 MQFWRYRDGKAENDPNYTECPFRFAGQYEDEESGLYYNRFRYYDRETGQ--YLSPDPIGL 1518 Query: 232 PLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQ 272 L + +G + P L G Sbjct: 1519 LGGL-------------NPYGYV---HCPTGWVDPFGLAGG 1543 Score = 61.0 bits (146), Expect = 1e-07, Method: Composition-based stats. Identities = 50/449 (11%), Positives = 103/449 (22%), Gaps = 73/449 (16%) Query: 45 YHYDSQHRLVHYTRTQYAEPLVESRYLYDPLGRRVAKRV-----------WRRERDLTGW 93 + Y+ Q +LV R + Y D L R ++ + L+ Sbjct: 600 FIYNEQSQLVSVKRHDG--IALILEYQQDKLVRICSESTTSSPRDFVRCEYDTHGYLSQC 657 Query: 94 MSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQ--------------------PGSFTP 133 + + Y +G + D T + Y + Sbjct: 658 HAYQQNHLWHRYSPEGLMVAWGDTDSTELTIDYDEQGRVVATHSPSGFWNDRFIYDDYQR 717 Query: 134 LIRVETATGELAKTQR--RSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSE 191 + A G ++ +L + + + ++ + Sbjct: 718 MTTYIDAEGGFSRYYYNDDNLVTRTIDPLWRETYTEWEQRKKIAEINEIGERTEYGYHYN 777 Query: 192 ESRRWLASCGLTVEQMQNQMDPVYT----PARKIHLYHCDHRGLPLALVSTEGATEWCAE 247 ++ T D G + +G E Sbjct: 778 GLLAYIYLPDGKAIYYDYNDYGQLTHFTSAFGDEWQLSYDENGNLTIVTDPQGRQ-QVYE 836 Query: 248 YDEWGNLLNEENPHQLQQLIRL-PGQQYDEESGLYYNRHRYYDPLQGRYITQDPIGLKGG 306 Y + G LL P+ Q P Q + + Y + Y+ GR + Sbjct: 837 YSQHGELLKAITPNGAQWQYHYNPAHQLIKTTNPYQHSTEYHSDELGRLLH-----YTDA 891 Query: 307 WN---FYQYPLNPVQYIDSMGLASKYGHLNNGGYGARPNKPPTPDPSKLPDIAKQLRLPY 363 N YQY + G+ + D + R+ Sbjct: 892 LNHTTRYQY-----------------STEHASTNGSLSKILLPDGVEQQIDYDSERRVIA 934 Query: 364 PIDQASSAPNVFKTFFRA----LSPYDYTLYCRKWVKPNLTCTPQDDSQYPGMDTKTASD 419 D F + P + L + + + A Sbjct: 935 VTDGEGKTTRYRYGPFDVLLAMIRPDGSEIRFEYDSLTRLKKVVNANGEVYLYERDKAGQ 994 Query: 420 YLPQTNWPTTQLPPGYTCAEPYL---FPD 445 + + ++ ++ Y + +PD Sbjct: 995 IIREVDFTGREICYRYDRLGRRIATRYPD 1023 Score = 60.2 bits (144), Expect = 2e-07, Method: Composition-based stats. Identities = 38/315 (12%), Positives = 79/315 (25%), Gaps = 54/315 (17%) Query: 2 WPDNRIARDAHYLYRYDRHGRLTEKT-------------DLIPEGVIRTDDERTHRYHYD 48 W D YD GR+ D + RY+Y+ Sbjct: 678 WGD---TDSTELTIDYDEQGRVVATHSPSGFWNDRFIYDDYQRMTTYIDAEGGFSRYYYN 734 Query: 49 SQHRLVHYTRT----------------QYAEPLVESRYLYDPLGRRVAKRVWRRERDLTG 92 + + + E + Y Y G + + Sbjct: 735 DDNLVTRTIDPLWRETYTEWEQRKKIAEINEIGERTEYGYHYNGLLAYIYLPDGKAIYYD 794 Query: 93 WMSLSRKP-------QVTWYGWDGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELA 145 + + +D + TI D Q +Y+ L++ T G Sbjct: 795 YNDYGQLTHFTSAFGDEWQLSYDENGNLTIVTDPQGRQQVYEYSQHGELLKAITPNGAQW 854 Query: 146 KTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVE 205 + ++ + + L ++L ++ R + + L+ Sbjct: 855 QYHYNPAHQLIKTTNPYQHSTEYHSDELGRLLHYTDALNHTTRYQYSTEHASTNGSLSKI 914 Query: 206 QMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQ 265 + + ++ + +A+ EG T Y + LL P + Sbjct: 915 LLPDGVEQQIDYDSERR---------VIAVTDGEGKTT-RYRYGPFDVLLAMIRPDGSEI 964 Query: 266 LIRLPGQQYDEESGL 280 +YD + L Sbjct: 965 RF-----EYDSLTRL 974 Score = 50.6 bits (119), Expect = 1e-04, Method: Composition-based stats. Identities = 35/270 (12%), Positives = 66/270 (24%), Gaps = 71/270 (26%) Query: 12 HYLYRYDRHGRLTEKTDLIPEGVIR------------TDDERTHRYHYDSQHRLVHYTRT 59 + YD +G LT TD + T + +YHY+ H+L+ T Sbjct: 811 EWQLSYDENGNLTIVTDPQGRQQVYEYSQHGELLKAITPNGAQWQYHYNPAHQLIKTTNP 870 Query: 60 QYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQ------------VTWYGW 107 + Y D LGR + + + + Sbjct: 871 YQHS----TEYHSDELGRLLHYTDALNHTTRYQYSTEHASTNGSLSKILLPDGVEQQIDY 926 Query: 108 DGDRLTTIQNDRTRIQTIY---------------------QPGSFTPLIRVETATGELAK 146 D +R D T Y + S T L +V A GE+ Sbjct: 927 DSERRVIAVTDGEGKTTRYRYGPFDVLLAMIRPDGSEIRFEYDSLTRLKKVVNANGEVYL 986 Query: 147 TQ---------------------RRSLADTLQQSGGEDGG-SVVFPPVLVQMLDRLESEI 184 + L + ++ + + + E Sbjct: 987 YERDKAGQIIREVDFTGREICYRYDRLGRRIATRYPDNHELRWRYNESGLVVEQSEWFED 1046 Query: 185 LADRVSEESRRWLASCGLTVEQMQNQMDPV 214 + + ++ + + + N V Sbjct: 1047 EQESRCLSTTQYSYNARQQLIKATNPDSVV 1076 >UniRef50_A8ZSG6 YD repeat protein n=1 Tax=Desulfococcus oleovorans Hxd3 RepID=A8ZSG6_DESOH Length = 423 Score = 206 bits (525), Expect = 1e-51, Method: Composition-based stats. Identities = 85/328 (25%), Positives = 122/328 (37%), Gaps = 33/328 (10%) Query: 12 HYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYL 71 +Y Y +D +T K + Y YD HRL T A L + + Sbjct: 55 NYTYAHDAMDNITAKQTEHGDYG----------YGYDDLHRL--ATVDNPAAGLADEAFT 102 Query: 72 YDPLGRRVAKRVWRRERDLTGWMSLSRKPQVT---WYGWDGDRLTTIQNDRTRIQTIYQP 128 YD +G R+ + L VT Y +D + T + + Y Sbjct: 103 YDSVGNRLTSAQAAGDWTYNDNNELLSSVGVTGGSTYEYDANGNTIKKTVGGVVT-SYVY 161 Query: 129 GSFTPLIRVETA---TGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEIL 185 + L +V + +G L T G + + L +EI Sbjct: 162 NTEDRLTQVWSGLPGSGSLTATYYYDPFGRRLWKGVGGTRTYFHYSD-----EGLVAEIN 216 Query: 186 ADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWC 245 A +S W + + YH DH G P L ++ GA W Sbjct: 217 ASGTVVKSYGWQPGG------TWGTDPLFMKVSGNYYFYHNDHLGTPQKLTASNGAVVWS 270 Query: 246 AEYDEWGNLLNEENPHQLQQLIRLPGQQYDEESGLYYNRHRYYDPLQGRYITQDPIGLKG 305 A+Y+ +G+ E ++ +R PGQ +D ESGL+YN HRYY P GR++ DPIGL+G Sbjct: 271 AKYESFGDATVE--IETVENNLRFPGQYFDGESGLHYNLHRYYAPELGRFLKDDPIGLRG 328 Query: 306 GWNFYQYP-LNPVQYIDSMGLASKYGHL 332 G N Y Y N D GL SK Sbjct: 329 GINQYIYADNNVSNNTDPYGLFSKKTKC 356 Score = 65.2 bits (157), Expect = 5e-09, Method: Composition-based stats. Identities = 33/227 (14%), Positives = 57/227 (25%), Gaps = 35/227 (15%) Query: 7 IARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLV 66 + Y YD +G +KT Y Y+++ RL + Sbjct: 131 VGVTGGSTYEYDANGNTIKKT----------VGGVVTSYVYNTEDRLTQVWSGLPGSGSL 180 Query: 67 ESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTIY 126 + Y YDP GRR+ K V T++ + + L N + Y Sbjct: 181 TATYYYDPFGRRLWKGVGGT---------------RTYFHYSDEGLVAEINASGTVVKSY 225 Query: 127 QP---GSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESE 183 G++ +G + Q G+VV+ D Sbjct: 226 GWQPGGTWGTDPLFMKVSGNY--YFYHNDHLGTPQKLTASNGAVVWSAKYESFGDATVEI 283 Query: 184 ILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRG 230 + ++ + P D G Sbjct: 284 ETVENNLRFPGQYFDGESGLHYNLHRYYAPELG-----RFLKDDPIG 325 >UniRef50_C3IAE1 Insecticidal toxin complex protein TccC (Toxin complex protein) n=1 Tax=Bacillus thuringiensis IBL 200 RepID=C3IAE1_BACTU Length = 921 Score = 206 bits (525), Expect = 1e-51, Method: Composition-based stats. Identities = 54/357 (15%), Positives = 103/357 (28%), Gaps = 41/357 (11%) Query: 10 DAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERT--HRYHYDSQHRLVHYTRTQYAEPLVE 67 Y Y YD G + ++ + + +Y YD+ +RL+ + + Sbjct: 317 LQDYHYEYDPVGNILSISNEMDSVCFFRNQIIVPKRQYTYDTLYRLISSSGRESDTLRQY 376 Query: 68 SR---------------------YLYDPLGRRVAKRVWRRERDLTGWM------------ 94 Y YD G + + T Sbjct: 377 QSFPSVITPIPLDDNQYVNYSEKYSYDRAGNLIKLSHTGATQYTTNIDVDVASNRGLLSL 436 Query: 95 SLSRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLAD 154 + ++ G++ + Q ++R + S Sbjct: 437 ENNVSNFENYFDRAGNQKILLPGIPMEWDARNQLSRVNMVVREDKENDWEG-YLYNSSGM 495 Query: 155 TLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPV 214 + + + + + E + + + + V +++ P Sbjct: 496 RIVKQDTRKKQDITKTDTTIYLPGLELRTRQIGDNVTEVLQIVTAAQVRVLHWKDETQPT 555 Query: 215 YTPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLI---RLPG 271 + DH G + +G E+ +G +++ R G Sbjct: 556 GITNNQYRYSVTDHLGSSSLELDKQGKIISKEEFYPYGGTALWTARTEIEANYKTIRYSG 615 Query: 272 QQYDEESGLYYNRHRYYDPLQGRYITQDPIGLKGGWNFYQYP-LNPVQYIDSMGLAS 327 ++ D +GLYY HRYY P GR++ DP G G N Y+ NP+ ID G A Sbjct: 616 KERDA-TGLYYYGHRYYIPWAGRWLNPDPAGTVDGLNLYRMVRNNPINLIDPDGNAP 671 >UniRef50_D1S833 YD repeat protein n=1 Tax=Micromonospora aurantiaca ATCC 27029 RepID=D1S833_9ACTO Length = 3829 Score = 206 bits (524), Expect = 1e-51, Method: Composition-based stats. Identities = 85/373 (22%), Positives = 120/373 (32%), Gaps = 33/373 (8%) Query: 7 IARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLV 66 IA A Y YD R+T D + + D R+ + V Sbjct: 2285 IADAAERRYTYDAADRVTAIADSLAGD---------QSFTADDTGRIRAV------DGDV 2329 Query: 67 ESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTIY 126 RY YD G V + TG M + Y G RLT +D + Sbjct: 2330 PQRYDYDEAGNLVG--AGGGRWEFTGTMLVRSDDATFSYDAKG-RLTGRVDDAGA--WRF 2384 Query: 127 QPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILA 186 + + ++ T G+ + + + + DG V+ D + + Sbjct: 2385 EWDAEDRMVLAVTPGGDRWRYRYDGFGRRIAKQRLGDGDRVLEEVSFAWSGDLMLEQTHR 2444 Query: 187 DRVSEESRR-WLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWC 245 D + W V Q T + D G P LV G W Sbjct: 2445 DAAGATTTTTWDYRPDAAVPVAQ-------TDDGTLRAVITDTIGTPTHLVEPGGGLRWW 2497 Query: 246 AEYDEWGNLLNEENPHQLQQLIRLPGQQYDEESGLYYNRHRYYDPLQGRYITQDPIGLKG 305 + D WG + + PGQ D E+GL+YNR RYYDP GRY++ DP+GL G Sbjct: 2498 SRGDLWGR-----GADRTATPLAFPGQYVDAETGLHYNRFRYYDPATGRYVSPDPLGLSG 2552 Query: 306 GWNFYQYPLNPVQYIDSMGLASKYGHLNNGGYGARPNKPPTPDPSKLPDIAKQLRLPYPI 365 G N Y NP+ D +GL S A + P P P Sbjct: 2553 GPNPTAYVSNPLTVADPLGLTSCTPAPTTPHPLAAVEPALAAPSDQTPSSLPTNAAPPPP 2612 Query: 366 DQASSAPNVFKTF 378 P + Sbjct: 2613 SALYGMPTWVREA 2625 Score = 74.1 bits (180), Expect = 1e-11, Method: Composition-based stats. Identities = 28/181 (15%), Positives = 47/181 (25%), Gaps = 20/181 (11%) Query: 11 AHYLYRYDRHGRLTEKTDLIPEGVIRT-----------DDERTHRYHYDSQHRLVHYTRT 59 Y YD GRL D D + YD + LV + Sbjct: 3606 GETEYTYDALGRLFSIQDDTGLTEFGWTLEGDLAWRENPDGSVEEFLYDGEGNLVEWVDA 3665 Query: 60 QYAEPLVES------RYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLT 113 + E D G R + + +L + Y +D + Sbjct: 3666 TGRRTIREYGAFDLVTAEIDDEGNRT---EYAYDTELRLVRVTNPAGATWSYTYDPNGRM 3722 Query: 114 TIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVL 173 + D Y + L+ A GE+ L +++ GE + + Sbjct: 3723 VSETDFDGRTQRYVYDAAGQLVERTDAAGEVTHYTYDLLGRVVERRTGESVTRIAYDAAG 3782 Query: 174 V 174 Sbjct: 3783 R 3783 Score = 73.3 bits (178), Expect = 2e-11, Method: Composition-based stats. Identities = 65/339 (19%), Positives = 96/339 (28%), Gaps = 79/339 (23%) Query: 2 WPDNRIARDAH-----YLYRYDRHGR--------------------LTEKTDLIPEGVIR 36 + D R+ R Y Y YD GR T TD + + Sbjct: 3407 YADGRLVRWEDRNGEWYTYTYDEAGRCVATDGKGGYLRYRFDYQPGRTVVTDSLGAVRVY 3466 Query: 37 TDDER------------THRYHYDSQHRLVHYTRTQYAEPLVESRYLYDPLGRRVAKRVW 84 ++R T R +D +RL T E YD GR VA Sbjct: 3467 ELNDRFQVVAETDALGATTRNVWDEAYRLRSTTDPLGRTTASE----YDAYGRLVAVTRP 3522 Query: 85 RRERDLTGWMSLSRK---------PQVTWYGWDGD------------RLTTIQNDRTRIQ 123 R +T + L R + +G DG R D Sbjct: 3523 DGSRSVTTYDELGRAVSWTDFDGSTRNRQFGPDGLLIAEVDASGEVVRYEQPAADGRGTT 3582 Query: 124 TIYQPGSF--TPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQML---- 177 T P + P ++ + +T+ A S +D G F L L Sbjct: 3583 THVGPTAVVHDPARQITAVSTGQGETEYTYDALGRLFSIQDDTGLTEFGWTLEGDLAWRE 3642 Query: 178 --DRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPV-----YTPARKIHLYHCDHRG 230 D E L D W+ + G + D V R + Y + R Sbjct: 3643 NPDGSVEEFLYDGEGNLV-EWVDATGRRTIREYGAFDLVTAEIDDEGNRTEYAYDTELR- 3700 Query: 231 LPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRL 269 + + + GA W YD G +++E + Q Sbjct: 3701 -LVRVTNPAGA-TWSYTYDPNGRMVSETDFDGRTQRYVY 3737 Score = 72.1 bits (175), Expect = 4e-11, Method: Composition-based stats. Identities = 48/274 (17%), Positives = 82/274 (29%), Gaps = 35/274 (12%) Query: 10 DAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESR 69 + Y YD GRL +TD D RT RY +D RLV +T +R Sbjct: 2103 GRTWHYEYDAAGRLCGQTD---------FDGRTQRYEHDEAGRLVAHTDAAG----TVTR 2149 Query: 70 YLYDPLGRRVAKRVWRRERDLTGWMSLSRK-----PQVTWYGWDGD-RLTTIQNDRTRIQ 123 Y +D GR V +RV + + D + R+ + + ++ Sbjct: 2150 YRWDARGRVVERRVGDAVTRVEYDADGHVAAVLSPDAQVRFTRDAEGRVLSETINGRTVR 2209 Query: 124 TIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDR---- 179 T Y + + T +G ++ + + GE ++ Sbjct: 2210 TSYT--ASGTVEARTTPSGRSSRWTFDAAGRPESLTAGEHLLGFTHDDAGREIGRTVGGL 2267 Query: 180 --LESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVS 237 L A A+ +++ + + D G A+ Sbjct: 2268 VALRQTFDAAGRLTGQHIADAAERRYTYDAADRVTAIADSLAGDQSFTADDTGRIRAV-- 2325 Query: 238 TEGATEWCAEYDEWGNLLNEENPHQLQQLIRLPG 271 +G +YDE GNL+ G Sbjct: 2326 -DGDVPQRYDYDEAGNLVGAGGG-----RWEFTG 2353 Score = 71.8 bits (174), Expect = 5e-11, Method: Composition-based stats. Identities = 39/251 (15%), Positives = 76/251 (30%), Gaps = 27/251 (10%) Query: 18 DRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYLYDPLGR 77 D G + +G T +D ++ + Q E+ Y YD LGR Sbjct: 3563 DASGEVVRYEQPAADGRGTTTHVGPTAVVHDPARQITAVSTGQG-----ETEYTYDALGR 3617 Query: 78 R------VAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQPGSF 131 + + + V + +DG+ D T +TI + G+F Sbjct: 3618 LFSIQDDTGLTEFGWTLEGDLAWRENPDGSVEEFLYDGEGNLVEWVDATGRRTIREYGAF 3677 Query: 132 TPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSE 191 + G + + L + G + + R+ SE D Sbjct: 3678 DLVTAEIDDEGNRTEYAYDTEL-RLVRVTNPAGATWSYTYDPN---GRMVSETDFDG--- 3730 Query: 192 ESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEW 251 ++R++ + + + A ++ Y D G + G + YD Sbjct: 3731 RTQRYVYDAAGQLVERTD-------AAGEVTHYTYDLLGRVVER--RTGESVTRIAYDAA 3781 Query: 252 GNLLNEENPHQ 262 G ++ E+ Sbjct: 3782 GRVVPAEDGGS 3792 Score = 70.2 bits (170), Expect = 2e-10, Method: Composition-based stats. Identities = 40/282 (14%), Positives = 72/282 (25%), Gaps = 31/282 (10%) Query: 14 LYRYDRHGRLTEKTDLIPEG-----------VIRTDDERTHRYHYDSQHRLVHYTRTQYA 62 + YD L E T+ + + + Y YD R V T Sbjct: 3383 QFGYDGDLNLIEVTNSSGDPERFTYADGRLVRWEDRNGEWYTYTYDEAGRCVA---TDGK 3439 Query: 63 EPLVESRYLY--------DPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTT 114 + R+ Y D LG A RV+ T WD Sbjct: 3440 GGYLRYRFDYQPGRTVVTDSLG---AVRVYELNDRFQVVAETDALGATTRNVWDEAYRLR 3496 Query: 115 IQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLV 174 D T + ++ L+ V G + T L + + + Sbjct: 3497 STTDPLGRTTASEYDAYGRLVAVTRPDGSRSVTTYDELGRAVSWTDFDGSTRNRQFGPDG 3556 Query: 175 QMLDRLES----EILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRG 230 ++ +++ ++ V + + + Y D G Sbjct: 3557 LLIAEVDASGEVVRYEQPAADGRGTTTHVGPTAVVHDPARQITAVSTGQGETEYTYDALG 3616 Query: 231 LPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQ 272 ++ G + G+L ENP + G+ Sbjct: 3617 RLFSIQDDTG--LTEFGWTLEGDLAWRENPDGSVEEFLYDGE 3656 Score = 66.4 bits (160), Expect = 2e-09, Method: Composition-based stats. Identities = 39/262 (14%), Positives = 68/262 (25%), Gaps = 27/262 (10%) Query: 14 LYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYLYD 73 + YD RL E + R YD RLV + Y YD Sbjct: 1849 SFGYDDRRRLVEVRNS---------SGHETRLRYDDAGRLVRWQDRNG----EWFGYDYD 1895 Query: 74 PLGRRVAKRVWRRERDLTGWMS------LSRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQ 127 GR V + + +VT Y +D L T D + Sbjct: 1896 EAGRCVRAGGGGDVLRYSLRYDDGVTHVTNSLGEVTRYEFDERHLVTAIVDPLGGTVRQE 1955 Query: 128 PGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILAD 187 + L+ G + + + + DG + PP D +E + L Sbjct: 1956 WDAAHRLLSRTDPLGRVTRFDHEA-----RTLTLPDGSTHPVPPRPPAHADDIEFDALGR 2010 Query: 188 RVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWCAE 247 + + + + + + Y D G + ++ G E Sbjct: 2011 VRATRAPDGAVTTYGWTAEGDLAWRVRPDGSTQRWFY--DGEGNLVDVIDASGRAV-SFE 2067 Query: 248 YDEWGNLLNEENPHQLQQLIRL 269 Y + + + Sbjct: 2068 YGPFDLPTARVDQAGNRTEFTY 2089 Score = 65.2 bits (157), Expect = 5e-09, Method: Composition-based stats. Identities = 46/303 (15%), Positives = 79/303 (26%), Gaps = 56/303 (18%) Query: 9 RDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYA------ 62 Y +D GRL TD RY +D++ R+V Sbjct: 2123 DGRTQRYEHDEAGRLVAHTDAA---------GTVTRYRWDARGRVVERRVGDAVTRVEYD 2173 Query: 63 ---------EPLVESRYLYDPLGR--------RVAKRVWRRERDLTGWMSLSRKPQVTWY 105 P + R+ D GR R + + + + S + + Sbjct: 2174 ADGHVAAVLSPDAQVRFTRDAEGRVLSETINGRTVRTSYTASGTVEARTTPSGRSSRWTF 2233 Query: 106 GWDGD--------RLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELA---------KTQ 148 G L +D + G L + A G L + Sbjct: 2234 DAAGRPESLTAGEHLLGFTHDDAGREIGRTVGGLVALRQTFDAAGRLTGQHIADAAERRY 2293 Query: 149 RRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQ 208 AD + G F + ++ ++ +E+ + + G E Sbjct: 2294 TYDAADRVTAIADSLAGDQSFTADDTGRIRAVDGDVPQRYDYDEAGNLVGAGGGRWEFT- 2352 Query: 209 NQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIR 268 V + D +G V GA W E+D ++ P + R Sbjct: 2353 -GTMLVRSDDATFSY---DAKGRLTGRVDDAGA--WRFEWDAEDRMVLAVTPGGDRWRYR 2406 Query: 269 LPG 271 G Sbjct: 2407 YDG 2409 Score = 64.8 bits (156), Expect = 6e-09, Method: Composition-based stats. Identities = 39/299 (13%), Positives = 71/299 (23%), Gaps = 52/299 (17%) Query: 16 RYDRHGRLTEKTDLIPEGVIR------------TDDERTHRYHYDSQHRLVHYTRTQYAE 63 +D GR+ D T R+ YD + LV Sbjct: 2004 EFDALGRVRATRAPDGAVTTYGWTAEGDLAWRVRPDGSTQRWFYDGEGNLVDVID----A 2059 Query: 64 PLVESRYLY----------DPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLT 113 + Y D G R + + +L + + Y +D Sbjct: 2060 SGRAVSFEYGPFDLPTARVDQAGNRT---EFTYDTELRLVGVTNPAGRTWHYEYDAAGRL 2116 Query: 114 TIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVL 173 Q D Y+ L+ A G + + + + +++ G+ V + Sbjct: 2117 CGQTDFDGRTQRYEHDEAGRLVAHTDAAGTVTRYRWDARGRVVERRVGDAVTRVEYDADG 2176 Query: 174 ----VQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHR 229 V D S T ++ TP+ + + D Sbjct: 2177 HVAAVLSPDAQVRFTRDAEGRVLSETINGRTVRTSYTASGTVEARTTPSGRSSRWTFDAA 2236 Query: 230 GLPLALV----------STEGATEWCA---------EYDEWGNLLNEENPHQLQQLIRL 269 G P +L G +D G L + ++ Sbjct: 2237 GRPESLTAGEHLLGFTHDDAGREIGRTVGGLVALRQTFDAAGRLTGQHIADAAERRYTY 2295 Score = 64.1 bits (154), Expect = 1e-08, Method: Composition-based stats. Identities = 34/303 (11%), Positives = 65/303 (21%), Gaps = 61/303 (20%) Query: 10 DAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRY-------------------HYDSQ 50 +D RL +TD + + RT +D+ Sbjct: 1949 GGTVRQEWDAAHRLLSRTDPLGRVTRFDHEARTLTLPDGSTHPVPPRPPAHADDIEFDAL 2008 Query: 51 HRLVHYTRTQYAEP-----------------LVESRYLYDPLGRRVAKRVWRRERDLTGW 93 R+ A R+ YD G V + Sbjct: 2009 GRVRATRAPDGAVTTYGWTAEGDLAWRVRPDGSTQRWFYDGEGNLVDVIDASGRAVSFEY 2068 Query: 94 -------MSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAK 146 + + T + +D + + Y+ + L G + Sbjct: 2069 GPFDLPTARVDQAGNRTEFTYDTELRLVGVTNPAGRTWHYEYDAAGRLCGQTDFDGRTQR 2128 Query: 147 TQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQ 206 + + + + + ++ RV + R V Sbjct: 2129 YEHDEAGRLVAHTDAAGTVT--------RYRWDARGRVVERRVGDAVTRVEYDADGHVAA 2180 Query: 207 MQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQL 266 V +P ++ D G L+ G T Y G + P Sbjct: 2181 -------VLSPDAQVRFT-RDAEGRVLSET-INGRTV-RTSYTASGTVEARTTPSGRSSR 2230 Query: 267 IRL 269 Sbjct: 2231 WTF 2233 Score = 62.1 bits (149), Expect = 4e-08, Method: Composition-based stats. Identities = 33/169 (19%), Positives = 49/169 (28%), Gaps = 26/169 (15%) Query: 17 YDRHGRLTEKTDLIPEGVIR------------TDDERTHRYHYDSQHRLVHYTRTQYAEP 64 YD G L E D IR D+ Y YD++ RLV T A Sbjct: 3653 YDGEGNLVEWVDATGRRTIREYGAFDLVTAEIDDEGNRTEYAYDTELRLVRVTNPAGA-- 3710 Query: 65 LVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSR-------KPQVTWYGWDGDRLTTIQN 117 Y YDP GR V++ + + + + +VT Y +D + Sbjct: 3711 --TWSYTYDPNGRMVSETDFDGRTQRYVYDAAGQLVERTDAAGEVTHYTYDLLGRVVERR 3768 Query: 118 DRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGS 166 + I + + V G A + S Sbjct: 3769 TGESVTRI-AYDAAGRV--VPAEDGGSQARLEHDAAGRVASGATMSTSS 3814 Score = 59.8 bits (143), Expect = 2e-07, Method: Composition-based stats. Identities = 26/86 (30%), Positives = 36/86 (41%), Gaps = 13/86 (15%) Query: 10 DAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESR 69 A + Y YD +GR+ +TD D RT RY YD+ +LV T + Sbjct: 3709 GATWSYTYDPNGRMVSETD---------FDGRTQRYVYDAAGQLVERTDAAG----EVTH 3755 Query: 70 YLYDPLGRRVAKRVWRRERDLTGWMS 95 Y YD LGR V +R + + Sbjct: 3756 YTYDLLGRVVERRTGESVTRIAYDAA 3781 Score = 51.7 bits (122), Expect = 5e-05, Method: Composition-based stats. Identities = 23/106 (21%), Positives = 32/106 (30%), Gaps = 19/106 (17%) Query: 3 PDNRIA-----RDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYT 57 P+ R+ Y YD G+L E+TD Y YD R+V Sbjct: 3718 PNGRMVSETDFDGRTQRYVYDAAGQLVERTDAA---------GEVTHYTYDLLGRVVERR 3768 Query: 58 RTQYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVT 103 + +R YD GR V + L + T Sbjct: 3769 TGES-----VTRIAYDAAGRVVPAEDGGSQARLEHDAAGRVASGAT 3809 >UniRef50_A7BPL6 Protein containing RHS repeats n=2 Tax=Beggiatoa sp. PS RepID=A7BPL6_9GAMM Length = 2594 Score = 206 bits (523), Expect = 2e-51, Method: Composition-based stats. Identities = 68/319 (21%), Positives = 108/319 (33%), Gaps = 35/319 (10%) Query: 14 LYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYLYD 73 Y D+ GR+T+K + + T Y YD RLV T+ +V +Y YD Sbjct: 2168 QYTRDKLGRITQKVETLE------GVNTTDVYGYDPAGRLVTVTQ----NGVVTEQYTYD 2217 Query: 74 PLGRRVAKRVWRRERDLTGWMSLSR----KPQVTWYGWDGDRLTTIQNDRTRIQTIYQPG 129 G R+ + R Y +G+ LT ++ Y+ Sbjct: 2218 ANGNRLTANTTTYGEVNGRYDEQDRLLEYGGNTYTYTANGELLTKNESGAIT---EYEYD 2274 Query: 130 SFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRV 189 L V+ + + + L D Sbjct: 2275 VLGNLRSVQLPDSTQIEYVIDGRNRRIGKKINGQL------VQGFLYQGALNPIAELDSN 2328 Query: 190 SEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVS-TEGATEWCAEY 248 ++ + V K + DH G P ++ T+G+ +Y Sbjct: 2329 GNVVSIFIYGSKINVPDY-------MLKNGKTYRILSDHLGSPRLVIDITDGSVVQHMDY 2381 Query: 249 DEWGNLLNEENPHQLQQLIRLPGQQYDEESGLYYNRHRYYDPLQGRYITQDPIGLKGG-W 307 D +GN+L++ NP Q G YD +GL R Y+P GR+ +DPI GG Sbjct: 2382 DTFGNILSDSNPGF--QPFGFAGGLYDVNTGLIRFGARDYEPEIGRWTAKDPILFDGGDT 2439 Query: 308 NFYQY-PLNPVQYIDSMGL 325 N Y Y +P+ ++D GL Sbjct: 2440 NLYGYVVNDPINFVDLFGL 2458 Score = 76.4 bits (186), Expect = 2e-12, Method: Composition-based stats. Identities = 56/406 (13%), Positives = 107/406 (26%), Gaps = 75/406 (18%) Query: 17 YDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYLYDPLG 76 YD G ++ TD++ R YD+ R++ T + Y YD Sbjct: 1912 YDNQGNISTLTDML---------TRQSSLAYDAVGRVISQTLPD----QRQIDYSYDAND 1958 Query: 77 RRVAKRVWRRER------------DLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQT 124 + +R T T Y ++ D+ Sbjct: 1959 NVTSITPPKRPVHHFAYTEQELLKRYTPPAVAGVTTPQTDYEYNLDKQLIKVVRPGGQNM 2018 Query: 125 IYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVL------VQMLD 178 ++ G+ T + T + + L G DGG++ + Sbjct: 2019 VFNYGATTGRLDGMTLPNGQRQYAYDANTGHLVTITGIDGGTLSYSYDGFLPLSETWNNG 2078 Query: 179 RLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVST 238 ++ ++ ++ Q D + A + L G L T Sbjct: 2079 TIQGKLSLTYDNDFRVTATRINEDNSINYQYDADSLLINAGDLSLTRDAQNG---LLTGT 2135 Query: 239 E-GATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEESGLYYNRHRYYDPLQGRYIT 297 + G Y+ +G L + + + Q R GR Sbjct: 2136 QLGNITTQHTYNPFGELASNTASNS--GNVLYSNQYT-----------RD---KLGRITQ 2179 Query: 298 QDPIGLKGGWNF---YQYPLNPVQYIDS---------MGLASKYGHLNNGGYGARPNKPP 345 + + G N Y Y D G+ ++ + G N Sbjct: 2180 K--VETLEGVNTTDVYGY--------DPAGRLVTVTQNGVVTEQYTYDANGNRLTANTTT 2229 Query: 346 TPDPSKLPDIAKQLRLPYPIDQASSAPN--VFKTFFRALSPYDYTL 389 + + D +L +A + K A++ Y+Y + Sbjct: 2230 YGEVNGRYDEQDRLLEYGGNTYTYTANGELLTKNESGAITEYEYDV 2275 Score = 67.9 bits (164), Expect = 7e-10, Method: Composition-based stats. Identities = 49/330 (14%), Positives = 89/330 (26%), Gaps = 38/330 (11%) Query: 7 IARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLV 66 + Y YD + +T T H + Y Q L YT A Sbjct: 1944 LPDQRQIDYSYDANDNVTSIT---------PPKRPVHHFAYTEQELLKRYTPPAVAGVTT 1994 Query: 67 -ESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRK-------PQVTWYGWDGDRLTTIQND 118 ++ Y Y+ + + + + + + + + Y +D + + Sbjct: 1995 PQTDYEYNLDKQLIKVVRPGGQNMVFNYGATTGRLDGMTLPNGQRQYAYDANTGHLVTIT 2054 Query: 119 RT-RIQTIYQPGSFTPLIRV---ETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLV 174 Y F PL T G+L+ T T + ++ + + + Sbjct: 2055 GIDGGTLSYSYDGFLPLSETWNNGTIQGKLSLTYDNDFRVTATRINEDNSINYQYDADSL 2114 Query: 175 QMLDRLESEILADRVSEESRRWLASCGL--TVEQMQNQMDPVYTPARKIHL---YHCDHR 229 + S + + L + T + + + Y D Sbjct: 2115 LINAGDLSLTRDAQNGLLTGTQLGNITTQHTYNPFGELASNTASNSGNVLYSNQYTRDKL 2174 Query: 230 GLPL--ALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRL--PGQQYDEESGLYYNRH 285 G T YD G L+ + + G + + Y Sbjct: 2175 GRITQKVETLEGVNTTDVYGYDPAGRLVTVTQNGVVTEQYTYDANGNRLTANTTTYGE-- 2232 Query: 286 RYYDPLQGRYITQDPIGLKGGWNFYQYPLN 315 + GRY QD + GG N Y Y N Sbjct: 2233 -----VNGRYDEQDRLLEYGG-NTYTYTAN 2256 Score = 42.5 bits (98), Expect = 0.033, Method: Composition-based stats. Identities = 27/255 (10%), Positives = 59/255 (23%), Gaps = 28/255 (10%) Query: 20 HGRL-TEKTDLIPEGVIRTDDERTHRYHY-DSQHRLVHYTRTQYAEPLVESRYLYDPLGR 77 +GR+ T D + + + T + D + R++ LV+ +Y Y+ GR Sbjct: 1838 NGRISTSVRDNVTKTITFTSAANRQHVSHLDDKGRILVRKTP----GLVDFQYRYNERGR 1893 Query: 78 RVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQPGSFTPLIRV 137 T ++ +D + D Q+ + +I Sbjct: 1894 LAMLTEGEGATAKTVTIN-----------YDNQGNISTLTDMLTRQSSLAYDAVGRVISQ 1942 Query: 138 ETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSEESRRWL 197 + + + + + + + + Sbjct: 1943 TLPDQRQIDYSYDANDNVTSITPPKRPVHHFAYTEQELLKRYTPPAVAGVTTPQTDYEYN 2002 Query: 198 ASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEW-GNLLN 256 L + V+ G + G YD G+L+ Sbjct: 2003 LDKQLIKVVRPGGQNMVFNYGATT--------GRLDGMTLPNGQR--QYAYDANTGHLVT 2052 Query: 257 EENPHQLQQLIRLPG 271 G Sbjct: 2053 ITGIDGGTLSYSYDG 2067 Score = 41.7 bits (96), Expect = 0.065, Method: Composition-based stats. Identities = 16/106 (15%), Positives = 30/106 (28%), Gaps = 16/106 (15%) Query: 5 NRIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEP 64 +R+ Y Y +G L K + Y YD L Sbjct: 2241 DRLLEYGGNTYTYTANGELLTKNE----------SGAITEYEYDVLGNLRSVQLPD---- 2286 Query: 65 LVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGD 110 + Y+ D RR+ K++ + + + +G+ Sbjct: 2287 STQIEYVIDGRNRRIGKKINGQLVQGFLYQ--GALNPIAELDSNGN 2330 >UniRef50_UPI00016A9A82 Rhs family protein n=2 Tax=Burkholderia oklahomensis RepID=UPI00016A9A82 Length = 1489 Score = 205 bits (522), Expect = 2e-51, Method: Composition-based stats. Identities = 89/416 (21%), Positives = 128/416 (30%), Gaps = 45/416 (10%) Query: 10 DAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPL---- 65 Y YD GRL G R+ YD+ L + E Sbjct: 1056 GGELNYSYDPAGRLLGSAVAGAAGRPDAAGVLAERFAYDAASNLRPAGQPGRVEGNRLLM 1115 Query: 66 -VESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQT 124 + RY YD GR V KR + + +V Sbjct: 1116 SGDRRYRYDAHGRLVEKRTGGHTIQHLKYDVEHQLVEV-----------NTVRRGVEQTV 1164 Query: 125 IYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEI 184 + + R+ +Q+ G + ++ L R+++ Sbjct: 1165 RFSYDALGR--RIAKRDAFGTTRFAWDGMRLVQEQRGHQAVTYLYEGDGYVPLARIDAIN 1222 Query: 185 LADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEW 244 G TVE P KI+ +H + G P L G W Sbjct: 1223 DDSHWLWRLYHEDERGGPTVE---------AKPEAKIYYFHANASGAPEELTDGGGRVVW 1273 Query: 245 CAEYDEWGNLLNEENPHQL------------QQLIRLPGQQYDEESGLYYNRHRYYDPLQ 292 Y WGN + +E + Q +RL GQ D E+G Y+ RYYDP Sbjct: 1274 RTRYRAWGNTVLQEYAPEFQANPAGDVMQPLPQALRLQGQYEDLETGFCYSTFRYYDPDV 1333 Query: 293 GRYITQDPIGLKGGWNFYQYPLNPVQYIDSMGLA----SKYGHLNNGGYGARPNKPPTPD 348 GR+IT DPIGL GG N YQY NP+ +ID G G+ G Y ++P Sbjct: 1334 GRFITPDPIGLAGGLNQYQYAPNPLTWIDPWGWVETPLDAPGYSTYGLYHPGASEPYYVG 1393 Query: 349 P--SKLPDIAKQLRLPYPIDQASSAPNVFKTFFRALSPYDYTLYCRKWVKPNLTCT 402 L D + + L+ Y + + + T T Sbjct: 1394 HTGQSLNDRLADHIDTKRAVRGQTEVRPLGGPEGTLTYSQAKGYEQAYREKYKTKT 1449 Score = 79.9 bits (195), Expect = 2e-13, Method: Composition-based stats. Identities = 38/284 (13%), Positives = 75/284 (26%), Gaps = 40/284 (14%) Query: 12 HYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYA--------- 62 + +D GR+T +TD + T Y YD + R+ Sbjct: 710 TTRFEHDARGRMTARTDAL---------GHTTHYRYDGRDRIAEAQLPNGGDERYRWSLA 760 Query: 63 --------EPLVESRYLYDPLGRRVAKRVWRRERDLTGWMS-------LSRKPQVTWYGW 107 + + YD GR + + + + + + + Sbjct: 761 DELTAFVDGNGHTTAFAYDAAGRLTTRIDANGHQIGLEYDAAGNLRTLYNELRDSYRFAY 820 Query: 108 DGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGE----LAKTQRRSLADTLQQSGGED 163 D Q ++ YQ + + V A G + +R +L +++ E Sbjct: 821 DAADRLIEQVGPDGVRVEYQRDARGAPVVVRQAAGTPEQITIELERDALGRLVRKRTPET 880 Query: 164 GGSVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHL 223 + + LDR+ L R + V + + Sbjct: 881 VTT--YGYDATGRLDRVTRTHLDGRPMDAVTFAYDELDRLVGETSEVVGDDGRIRMTRLA 938 Query: 224 YHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLI 267 + D G +G T Y G+L + + Sbjct: 939 HEHDALGNRTGTTLPDGRTLSWLYYGS-GHLHRIASNGETVCDF 981 Score = 61.7 bits (148), Expect = 5e-08, Method: Composition-based stats. Identities = 47/343 (13%), Positives = 80/343 (23%), Gaps = 74/343 (21%) Query: 8 ARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTH------------------RYHYDS 49 + YD HGRL E + V D Y Y + Sbjct: 409 RNANQLHFHYDAHGRLDELATMAGHRVQIEYDASHRERMSRVILYAGGATECLVSYAYTA 468 Query: 50 QHRLVHYTRTQYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMS-------------- 95 L + + E R+ YDP GR R+ + W + Sbjct: 469 DGLLASVSDGEGRE---RRRFGYDPAGRMTMHRLPGGKTAHYAWEAFERNALAEENGLTD 525 Query: 96 --------LSRKPQVTWYG---------------------WDGDRLTTIQNDRTRIQTIY 126 + + + W+ D L T D + Sbjct: 526 REARVVEHWTDDGERYRFAYDFTRQATRVTDHLGRTRLCEWNADYLVTAHTDALGQIWRF 585 Query: 127 QPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQ-------MLDR 179 L+ G + + + G + F + + D Sbjct: 586 DWSPNRELVGFVEPNGATTRLRYDDGRGLPTELVNALGETTQFAWHPLWMALEQQTLADG 645 Query: 180 LESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARK--IHLYHCDHRGLPLALVS 237 + + D T ++ Q P + I + D R +A Sbjct: 646 RQWQYQFDMRGNRVGETDPLGQRTEFRLNRQGRPAAIVDARGGITQFGWDTRHRLIARTD 705 Query: 238 TEGATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEESGL 280 G E+D G + + R G+ E+ L Sbjct: 706 CSG-ITTRFEHDARGRMTARTDALGHTTHYRYDGRDRIAEAQL 747 Score = 61.0 bits (146), Expect = 1e-07, Method: Composition-based stats. Identities = 49/295 (16%), Positives = 83/295 (28%), Gaps = 55/295 (18%) Query: 22 RLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYLYDPLGRRVAK 81 R+ T + V + +HYD+ RL +E YD R Sbjct: 393 RVDRATQTLRPVVFEDRNANQLHFHYDAHGRLDELATMAGHRVQIE----YDASHR---- 444 Query: 82 RVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETAT 141 R R + + Y DG L ++ + R + + + Sbjct: 445 --ERMSRVILYAGGATECLVSYAYTADG-LLASVSDGEGRERRRFGYDPAGRMTMHRLPG 501 Query: 142 GELAKTQRRSLAD--------------TLQQSGGEDGGSVVFPPVLVQMLDRLESEILAD 187 G+ A + + + +DG F + R+ + Sbjct: 502 GKTAHYAWEAFERNALAEENGLTDREARVVEHWTDDGERYRFAYDFTRQATRVTDHLGRT 561 Query: 188 RVSEESRRWLASCGLTVEQMQNQMD---------PVYTPARKIHLYHCDHRGLPLALVST 238 R+ E + +L + + D V L + D RGLP LV+ Sbjct: 562 RLCEWNADYLVTAHTDALGQIWRFDWSPNRELVGFVEPNGATTRLRYDDGRGLPTELVNA 621 Query: 239 EGATE---------------------WCAEYDEWGNLLNEENPHQLQQLIRLPGQ 272 G T W ++D GN + E +P + RL Q Sbjct: 622 LGETTQFAWHPLWMALEQQTLADGRQWQYQFDMRGNRVGETDPLGQRTEFRLNRQ 676 Score = 60.2 bits (144), Expect = 1e-07, Method: Composition-based stats. Identities = 63/478 (13%), Positives = 120/478 (25%), Gaps = 60/478 (12%) Query: 7 IARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLV 66 +A + Y++D G +TD + + + + R + Sbjct: 642 LADGRQWQYQFDMRGNRVGETDPLGQRTEFRLNRQ---------GRPAAIVDARGG---- 688 Query: 67 ESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTIY 126 +++ +D R +A+ T + D T + D T Y Sbjct: 689 ITQFGWDTRHRLIART--------------DCSGITTRFEHDARGRMTARTDALGHTTHY 734 Query: 127 QPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQM--------LD 178 + + + G + R SLAD L +G + F Sbjct: 735 RYDGRDRIAEAQLPNGGDERY-RWSLADELTAFVDGNGHTTAFAYDAAGRLTTRIDANGH 793 Query: 179 RLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVST 238 ++ E A L +++ P Y D RG P+ + Sbjct: 794 QIGLEYDAAGNLRTLYNELRDSYRFAYDAADRLIEQVGPDGVRVEYQRDARGAPVVVRQA 853 Query: 239 EG---ATEWCAEYDEWGNLLNEENPHQLQQLIRL-PGQQYDEESGLYYNRHRYYDPLQGR 294 G E D G L+ + P + + D + + R D + Sbjct: 854 AGTPEQITIELERDALGRLVRKRTPETVTT-YGYDATGRLDRVTR-THLDGRPMDAVTFA 911 Query: 295 YITQDPI--------GLKGGWNFYQYPL------NPVQYIDSMGLASKYGHLNNGGYGAR 340 Y D + G G + N G + + G G Sbjct: 912 YDELDRLVGETSEVVGDDGRIRMTRLAHEHDALGNRTGTTLPDGRTLSWLYY---GSGHL 968 Query: 341 PNKPPTPDPSKLPDIAKQLRLPYPIDQASSAPNVFKTFFRALSPYDYTLYCRKWVKPNLT 400 + + + R A + + + R + + + Sbjct: 969 HRIASNGETVCDFERDRLHREVSRTQGAQTLATAYDSLSRKVGQWIGDVRHGPSSWAAFG 1028 Query: 401 CTPQDDSQYPGMDTKTASDYLPQTNWPTTQLPPGYTCAEPYLFPDINKPDG-PATAGI 457 D + + + +L Y A L + G P AG+ Sbjct: 1029 SRQSQDRLRKAFAYDRGGELTARIDPLGGELNYSYDPAGRLLGSAVAGAAGRPDAAGV 1086 Score = 47.1 bits (110), Expect = 0.001, Method: Composition-based stats. Identities = 40/284 (14%), Positives = 73/284 (25%), Gaps = 33/284 (11%) Query: 4 DNRIARDAHYLYRYDRHGRLTEKTDLIPEGVIR------------TDDERTHRYHYDSQH 51 D RI + +D G T T + ++ E + D H Sbjct: 929 DGRIRMT-RLAHEHDALGNRTGTTLPDGRTLSWLYYGSGHLHRIASNGETVCDFERDRLH 987 Query: 52 RLVHYTRTQYAEPLVESRYLYDPL----GRRVAKRVWRRERDLTGWMSLSRKPQVTWYGW 107 R +RTQ A+ L YD L G+ + S+ + + Sbjct: 988 R--EVSRTQGAQTLAT---AYDSLSRKVGQWIGDVRHGPSSWAAFGSRQSQDRLRKAFAY 1042 Query: 108 DGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSV 167 D T + D + Y L+ A LA+ + Sbjct: 1043 DRGGELTARIDPLGGELNYSYDPAGRLLGSAVAGAAGRPDAAGVLAERFAYDAASNLRPA 1102 Query: 168 VFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCD 227 P + + + + + G T++ ++ ++ + Sbjct: 1103 GQPGRVEGNRLLMSGDRRYRYDAHGRLVEKRTGGHTIQHLKYDVEHQLVEVNTVR----- 1157 Query: 228 HRG---LPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIR 268 RG G D +G + +L Q R Sbjct: 1158 -RGVEQTVRFSYDALGRRIAKR--DAFGTTRFAWDGMRLVQEQR 1198 >UniRef50_A1AK54 YD repeat protein n=1 Tax=Pelobacter propionicus DSM 2379 RepID=A1AK54_PELPD Length = 1352 Score = 205 bits (522), Expect = 2e-51, Method: Composition-based stats. Identities = 74/343 (21%), Positives = 120/343 (34%), Gaps = 27/343 (7%) Query: 12 HYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYL 71 + Y DR G T+ T Y YD+ +RL++ +++ +Y Sbjct: 927 SFSYTLDRVGNRLSTTEA----------NATTNYGYDAIYRLLYAQQSRRHNSRDNEQYS 976 Query: 72 YDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQN---------DRTRI 122 YDP+G R+ ++ G + K + +D + ++ Sbjct: 977 YDPVGNRL-IGPHQQTGYSYGTGNQLLKNDQASFTYDKNGNLAERSLDNDQHGHHGHQST 1035 Query: 123 QTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDG-GSVVFPPVLVQMLDRLE 181 Y L++ E + +++ G G + Sbjct: 1036 SWKYTFDYENRLVKAENGAVNV-SFAYDPFGRRIEKRTEITGPGERGHDVEEGITRYLYD 1094 Query: 182 SEILADRVSEESRRWLASCGLTVEQMQNQMDPVYT-PARKIHLYHCDHRGLPLALVSTEG 240 L E R S ++ N +P+ + YH D G +AL G Sbjct: 1095 GMNLIRETRERHRHAGRSETISYLHGPNIDEPLAAMSDHRSWYYHADGLGSIVALTDRHG 1154 Query: 241 ATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEESGLYYNRHRYYDPLQGRYITQDP 300 YD +GN ++ + Q G+++D E+GLYY R RYYDP GR+I +DP Sbjct: 1155 TVVQEYNYDSFGNP--DQRGENIDQPFSYTGREWDRETGLYYYRARYYDPKIGRFIQKDP 1212 Query: 301 IGLKGG-WNFYQYP-LNPVQYIDSMGLASKYGHLNNGGYGARP 341 I GG N Y Y NP+ +D GL + N A Sbjct: 1213 ISFAGGDVNLYAYVLNNPINRLDPFGLWNSKTFPTNISNYANS 1255 Score = 89.5 bits (220), Expect = 2e-16, Method: Composition-based stats. Identities = 40/287 (13%), Positives = 68/287 (23%), Gaps = 44/287 (15%) Query: 9 RDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQY------- 61 Y YD TD + T Y YDS R++ T Sbjct: 514 DGNTTRYTYDAANNPLTVTDPLGN---------TTSYTYDSLGRVLTITDPDGRITINSY 564 Query: 62 ----------AEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLS---------RKPQV 102 + YD G + R R + + + K Sbjct: 565 DERGNLLRSVDPTGGAYLFAYDAAGNLTSVTDPRGNRVGYVYDTYNTIAAITDQNGKTIR 624 Query: 103 TWYGWDGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGE 162 + G+ LT D Y + L+ + G K +L + + G Sbjct: 625 FSHDISGNLLTMKDPDGKITT--YSYDALNRLVAITDPLGTTTKFTYDNLGNRTAVTDGN 682 Query: 163 DGGSVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIH 222 + R + + D + + CG +++ + + Sbjct: 683 GNLTSYTYNF------RNKPLTIRDALGSTTTLAYGGCGSCGGGGNDKLTSLTDANNNLT 736 Query: 223 LYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRL 269 Y D G G YD NL + + Sbjct: 737 GYEYDQLGRLARETDPLGNVTG-YGYDSRDNLTARTDANGSTATYAY 782 Score = 78.7 bits (192), Expect = 4e-13, Method: Composition-based stats. Identities = 56/335 (16%), Positives = 84/335 (25%), Gaps = 81/335 (24%) Query: 10 DAHYLYRYDRHGRLTEKTDLIPEGVIR--------------------------------- 36 YL+ YD G LT TD V Sbjct: 578 GGAYLFAYDAAGNLTSVTDPRGNRVGYVYDTYNTIAAITDQNGKTIRFSHDISGNLLTMK 637 Query: 37 TDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWM-- 94 D + Y YD+ +RLV T +++ YD LG R A + Sbjct: 638 DPDGKITTYSYDALNRLVAITDPLG----TTTKFTYDNLGNRTAVTDGNGNLTSYTYNFR 693 Query: 95 ----------------------------------SLSRKPQVTWYGWDGDRLTTIQNDRT 120 +T Y +D + D Sbjct: 694 NKPLTIRDALGSTTTLAYGGCGSCGGGGNDKLTSLTDANNNLTGYEYDQLGRLARETDPL 753 Query: 121 RIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRL 180 T Y S L A G A + L+++ + +L Sbjct: 754 GNVTGYGYDSRDNLTARTDANGSTATYAYDANNRLLRKTYPDGSVESFSYDARGNILTAA 813 Query: 181 ESEILADRVSEESRRWLASCGLTVEQMQNQMDPVY------TPARKIHLYHCDHRGLPLA 234 I + + R L+S G ++ + DP TP + Y D A Sbjct: 814 NKHISYAFSYDANNRMLSSTGSNNGTLKYEYDPAGNRTTMVTPEGERISYRYDAANHLTA 873 Query: 235 LVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRL 269 +VS G Y++ G P+ R Sbjct: 874 IVSPRGTF--DITYNDLGRRTKLSYPNGATISYRY 906 Score = 74.8 bits (182), Expect = 7e-12, Method: Composition-based stats. Identities = 46/303 (15%), Positives = 78/303 (25%), Gaps = 42/303 (13%) Query: 2 WPDNRIARDAH-----YLYRYDRHGRLTEKTDLIPEGVIRTDD------------ERTHR 44 + N + + + YD +GR+ KTD D RT Sbjct: 397 YSGNLLTSVTDPAGTSWRFVYDEYGRMIRKTDPGNNTSENGYDAAGRNISSTDAEGRTKT 456 Query: 45 YHYDSQHRLVHYTRTQYAEPLVESRY---------LYDPLGRRVAKRVWRRERDLTGWMS 95 Y++ + T+ + Y DPLG V + + L+ Sbjct: 457 ISYNATG---SSSVTEKDGSVWTHAYDPTLNVPTATTDPLGNTVRRSYDAKGNLLSITDP 513 Query: 96 LSRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADT 155 T Y +D D T Y S ++ + G + + Sbjct: 514 ---DGNTTRYTYDAANNPLTVTDPLGNTTSYTYDSLGRVLTITDPDGRITINSYDERGNL 570 Query: 156 LQQSGGEDGGSVVFPPV--------LVQMLDRLESEILADRVSEESRRWLASCGLTVEQM 207 L+ S GG+ +F +R+ + Sbjct: 571 LR-SVDPTGGAYLFAYDAAGNLTSVTDPRGNRVGYVYDTYNTIAAITDQNGKTIRFSHDI 629 Query: 208 QNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLI 267 + + P KI Y D +A+ G T YD GN + + Sbjct: 630 SGNLLTMKDPDGKITTYSYDALNRLVAITDPLGTTT-KFTYDNLGNRTAVTDGNGNLTSY 688 Query: 268 RLP 270 Sbjct: 689 TYN 691 Score = 73.3 bits (178), Expect = 2e-11, Method: Composition-based stats. Identities = 40/278 (14%), Positives = 73/278 (26%), Gaps = 49/278 (17%) Query: 3 PDNRIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYA 62 +N + Y YD+ GRL +TD + Y YDS+ L T + Sbjct: 731 ANNNLTG-----YEYDQLGRLARETDPLGN---------VTGYGYDSRDNLTARTDANGS 776 Query: 63 EPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSR------KPQVTWYGWDGDRLTTIQ 116 + Y YD R + K + + + K + +D + Sbjct: 777 ----TATYAYDANNRLLRKTYPDGSVESFSYDARGNILTAANKHISYAFSYDANNRMLSS 832 Query: 117 NDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLAD-------------------TLQ 157 Y+ + T GE + + Sbjct: 833 TGSNNGTLKYEYDPAGNRTTMVTPEGERISYRYDAANHLTAIVSPRGTFDITYNDLGRRT 892 Query: 158 QSGGEDGGSVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTP 217 + +G ++ + + L +LE + R + L G + + Y Sbjct: 893 KLSYPNGATISYRYDNSERLVKLEHKTRHGRTIDSFSYTLDRVGNRLSTTEANATTNYGY 952 Query: 218 ARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLL 255 L + ++ YD GN L Sbjct: 953 DAIYRLLYAQQ----SRRHNSRDN--EQYSYDPVGNRL 984 Score = 64.1 bits (154), Expect = 1e-08, Method: Composition-based stats. Identities = 45/289 (15%), Positives = 82/289 (28%), Gaps = 47/289 (16%) Query: 11 AHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRY 70 Y YD G T E + Y YD+ + L + Sbjct: 838 GTLKYEYDPAGNRTTMVTPEGERI---------SYRYDAANHLTAIVSPRG-----TFDI 883 Query: 71 LYDPLGRRVAKRVWRRERDLTGWMSL------------SRKPQVTWYGWD--GDRLTTIQ 116 Y+ LGRR + + R Y D G+RL+T + Sbjct: 884 TYNDLGRRTKLSYPNGATISYRYDNSERLVKLEHKTRHGRTIDSFSYTLDRVGNRLSTTE 943 Query: 117 NDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQM 176 + T Y + L+ +++R + D Q S G ++ P Sbjct: 944 ANATT---NYGYDAIYRLL-------YAQQSRRHNSRDNEQYSYDPVGNRLIGPHQQTGY 993 Query: 177 LDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALV 236 +++L + + S + + L + N + Y D+ + Sbjct: 994 SYGTGNQLLKND--QASFTYDKNGNLAERSLDNDQHGHHGHQSTSWKYTFDYEN--RLVK 1049 Query: 237 STEGATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEESGLYYNRH 285 + GA YD +G + + +D E G+ + Sbjct: 1050 AENGAVNVSFAYDPFGRRIEKRTEITGPGERG-----HDVEEGITRYLY 1093 Score = 61.7 bits (148), Expect = 5e-08, Method: Composition-based stats. Identities = 48/430 (11%), Positives = 98/430 (22%), Gaps = 98/430 (22%) Query: 22 RLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYLYDPLGRRVAK 81 + + T+ R D T + ++ +L + + G +A Sbjct: 315 NIVKTTEGSYVRTFR--DGLTQTF--NASGQLTAISDANGNTTTLAYS------GNDLAT 364 Query: 82 RVWRRERDLTGWMSLSR-------KPQVTWYGWDGDRLTTIQNDRTRIQTIYQPGSFTPL 134 R+LT S R ++T + + G+ LT++ + + + + Sbjct: 365 VTDSTSRNLTIGSSDGRIIAIQDPAGRMTSFAYSGNLLTSVTDPAGT-SWRFVYDEYGRM 423 Query: 135 IRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSEESR 194 IR ++ + + + E + Sbjct: 424 IRKTDPGNNTSENGYDAAGRNISSTDAEGRTKTISYNAT--------------------- 462 Query: 195 RWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDH-RGLPLALVSTEGATEWCAEYDEWGN 253 V + + D +P A G T YD GN Sbjct: 463 ---------------GSSSVTEKDGSVWTHAYDPTLNVPTATTDPLGNTV-RRSYDAKGN 506 Query: 254 LLNEENPHQLQQLIRLPGQQYDEESGLYYNRHRYYDPLQGRYITQDPIGLKGGWNFYQYP 313 LL+ +P YD Sbjct: 507 LLSITDPDGNTTRYT-------------------YDA----------------------A 525 Query: 314 LNPVQYIDSMGLASKYGHLNNGGYGARPNKPPTPDPSKLPDIAKQLRLPYPIDQASS-AP 372 NP+ D +G + Y + + G + + + LR P A A Sbjct: 526 NNPLTVTDPLGNTTSYTYDSLGRVLTITDPDGRITINSYDERGNLLRSVDPTGGAYLFAY 585 Query: 373 NVFKTFFRALSPYDYTLYCRKWVKPNLTCTPQDDSQYPGMDTKTASDYLPQTNWPTTQLP 432 + P + + + + + + L + Sbjct: 586 DAAGNLTSVTDPRGNRVGYVYDTYNTIAAITDQNGKTIRFSHDISGNLLTMKDPDGKITT 645 Query: 433 PGYTCAEPYL 442 Y + Sbjct: 646 YSYDALNRLV 655 >UniRef50_Q6LUC4 Putative uncharacterized protein n=1 Tax=Photobacterium profundum RepID=Q6LUC4_PHOPR Length = 532 Score = 205 bits (521), Expect = 3e-51, Method: Composition-based stats. Identities = 74/320 (23%), Positives = 130/320 (40%), Gaps = 33/320 (10%) Query: 18 DRHGRLTEKTDLIPEG-----VIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYLY 72 D+ GR ++ I+ + ++ YD+ ++L + + + Y + Sbjct: 77 DKLGRELKRHQSNGITQHCDFAIQDNALGRQQFSYDALNQL-----QAHHQNNTTTHYQF 131 Query: 73 DPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQPGSFT 132 D G E + T + ++ Y G++ T D + + F Sbjct: 132 DSFGNPSLGNPDFEESESTNDRLQRYQSKLFDYDKCGNQATVRDEDSAQHRQF---NGFN 188 Query: 133 PLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSEE 192 L ++ + G + +L +++ + + D+L E S+ Sbjct: 189 QLTQL-SHNGRYSHYDYDALGRRSRKTTEQST------VDFLWDGDQLIGE-----HSQG 236 Query: 193 SRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWG 252 RW + + YH DH G P + +++G W A Y+ G Sbjct: 237 QYRWYIYAPDDFTPLA------LIENGTFYYYHTDHLGTPHTVTNSDGEVVWQATYNALG 290 Query: 253 NLLNEENPHQLQQLIRLPGQQYDEESGLYYNRHRYYDPLQGRYITQDPIGLKGGWNFYQY 312 + + +R GQ +D+ESGL+YNR RYYDP G++I QDPIGL GG N Y+Y Sbjct: 291 CAFI--SIDIIHNPLRFQGQYHDQESGLHYNRFRYYDPSIGQFIHQDPIGLLGGINHYRY 348 Query: 313 PLNPVQYIDSMGLASKYGHL 332 NP+Q++D +GL+ K G + Sbjct: 349 APNPIQWVDPLGLSCKEGII 368 Score = 75.6 bits (184), Expect = 4e-12, Method: Composition-based stats. Identities = 44/247 (17%), Positives = 68/247 (27%), Gaps = 47/247 (19%) Query: 4 DNRIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAE 63 ++R+ R L+ YD+ G V D + ++ + ++L + Sbjct: 151 NDRLQRYQSKLFDYDKCGN--------QATVRDEDSAQHRQF--NGFNQLTQLSH----- 195 Query: 64 PLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQ 123 S Y YD LGRR K + D + WDGD+L + Sbjct: 196 NGRYSHYDYDALGRRSRKTTEQSTVD---------------FLWDGDQLIGEHSQGQYRW 240 Query: 124 TIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESE 183 IY P FTPL +E T + + G VV+ + S Sbjct: 241 YIYAPDDFTPLALIENGT----FYYYHTDHLGTPHTVTNSDGEVVWQATYNALGCAFISI 296 Query: 184 ILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATE 243 + ++ DP H D GL Sbjct: 297 DIIHNPLRFQGQYHDQESGLHYNRFRYYDPSIGQ-----FIHQDPIGLLGG--------I 343 Query: 244 WCAEYDE 250 Y Sbjct: 344 NHYRYAP 350 Score = 50.6 bits (119), Expect = 1e-04, Method: Composition-based stats. Identities = 61/398 (15%), Positives = 98/398 (24%), Gaps = 82/398 (20%) Query: 13 YLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYLY 72 Y YD+ G + + D + Y YDSQ +L A+ L R Sbjct: 30 LQYEYDQKGNRKQ---------LILPDGQCLGYDYDSQQQL-SAITLNGADVLKVQR--- 76 Query: 73 DPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDG-DRLTTIQNDRTRIQTIYQPGSF 131 D LGR + + + + +D ++L + T + SF Sbjct: 77 DKLGRELKRHQSNGITQHCDFAIQDNALGRQQFSYDALNQLQAHHQNNTTTHYQF--DSF 134 Query: 132 TPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSE 191 + G + S D LQ+ + L D Sbjct: 135 G-----NPSLGNPDFEESESTNDRLQRYQSK----------------------LFDYDKC 167 Query: 192 ESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEW 251 ++ + + N + + + H D YD Sbjct: 168 GNQATVRDEDSAQHRQFNGFNQLTQLSHNGRYSHYD--------------------YDAL 207 Query: 252 GNLLNEENPHQLQQLIRLPGQQYDEESGLYYNRHRYYDPLQGRYITQDPIGLKGGWNFYQ 311 G + + Q G Q E R Y P + P+ L FY Sbjct: 208 GR-RSRKTTEQSTVDFLWDGDQLIGEHSQGQYRWYIYAPDD--FT---PLALIENGTFYY 261 Query: 312 Y----PLNPVQYIDSMGLASKYGHLNNGG-----YGARPNKPPTPDPSKLPDIA---KQL 359 Y P +S G N G N + + Sbjct: 262 YHTDHLGTPHTVTNSDGEVVWQATYNALGCAFISIDIIHNPLRFQGQYHDQESGLHYNRF 321 Query: 360 RLPYPIDQASSAPNVFKTFFRALSPYDYTLYCRKWVKP 397 R P + ++ Y Y +WV P Sbjct: 322 RYYDPSIGQFIHQDPIGL-LGGINHYRYAPNPIQWVDP 358 >UniRef50_B5H9Z7 Rhs protein n=2 Tax=Streptomyces RepID=B5H9Z7_STRPR Length = 1054 Score = 205 bits (521), Expect = 3e-51, Method: Composition-based stats. Identities = 80/436 (18%), Positives = 124/436 (28%), Gaps = 31/436 (7%) Query: 6 RIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEP- 64 RI + YD GRLT++ + Y Y + L Sbjct: 498 RIGDTLAIEHAYDAGGRLTDQRVRGAGDRTL----QHRTYTYRADGHLTSVDDQLGGRRR 553 Query: 65 ---------------LVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRK---PQVTWYG 106 RY YD G + + + Y Sbjct: 554 LELTREGRVTGVTAENWSERYAYDEAGNQTTASSPGGGDTDGPREYVGTRITRAGRVRYE 613 Query: 107 WDGDRLTTIQNDRTRI----QTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGE 162 D ++ Y + L+ V T G + +L + + Sbjct: 614 HDAQGRVVLRQKARLSRKPDTWHYGWDAEDHLVSVTTPDGTRWRYVYDALGRRIAKQRLS 673 Query: 163 DGGSVV-FPPVLVQMLDRL--ESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPAR 219 + V D L ++ L + W V Q++ ++ R Sbjct: 674 ADATTVAEEVTFTWDGDTLCEQTTSLTGSADSVALTWDHDGVKPVTQVERRLLDRSEVDR 733 Query: 220 KIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEESG 279 + D G P LV +G W WG + +R PGQ +D ESG Sbjct: 734 RFFAIVTDLVGTPRELVDEQGKVAWRTRATLWGTTTWNRSATAY-TPLRFPGQYFDPESG 792 Query: 280 LYYNRHRYYDPLQGRYITQDPIGLKGGWNFYQYPLNPVQYIDSMGLASKYGHLNNGGYGA 339 L+YNRHR+YDP GRY++ DP+GL N Y NP ++ID +GLA + Sbjct: 793 LHYNRHRHYDPESGRYLSPDPLGLVPAPNAVTYVDNPTRWIDPLGLAGCPHRNGEHRHSV 852 Query: 340 RPNKPPTPDPSKLPDIAKQLRLPYPIDQASSAPNVFKTFFRALSPYDYTLYCRKWVKPNL 399 P P + + P + Y N+ Sbjct: 853 VLGVDMEPHRQSESLARYLRNDPSYPNHDPNRPQDPGAHTYNGNAYSGEEAGGPIWMTNV 912 Query: 400 TCTPQDDSQYPGMDTK 415 D + + Sbjct: 913 MAAVGDRNTTLSITLD 928 Score = 77.5 bits (189), Expect = 1e-12, Method: Composition-based stats. Identities = 44/241 (18%), Positives = 71/241 (29%), Gaps = 32/241 (13%) Query: 2 WPDNRIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQY 61 + RI R Y +D GR+ + T Y +D++ LV T Sbjct: 599 YVGTRITRAGRVRYEHDAQGRVVLRQKARLSRKPD-----TWHYGWDAEDHLVSVTTPDG 653 Query: 62 AEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRL----TTIQN 117 RY+YD LGRR+AK+ + + + WDGD L T++ Sbjct: 654 ----TRWRYVYDALGRRIAKQRLSADATTV--------AEEVTFTWDGDTLCEQTTSLTG 701 Query: 118 DRTRIQTIYQPGSFTPLIRVETATGELAKTQRR------SLADTLQQSGGEDGGSVVFPP 171 + + P+ +VE + ++ RR L T ++ E G Sbjct: 702 SADSVALTWDHDGVKPVTQVERRLLDRSEVDRRFFAIVTDLVGTPRELVDEQGKVAWRTR 761 Query: 172 VLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGL 231 + A ++ DP D GL Sbjct: 762 ATLWGTTTWNRSATAYTPLRFPGQYFDPESGLHYNRHRHYDPESG-----RYLSPDPLGL 816 Query: 232 P 232 Sbjct: 817 V 817 Score = 68.7 bits (166), Expect = 4e-10, Method: Composition-based stats. Identities = 37/295 (12%), Positives = 62/295 (21%), Gaps = 50/295 (16%) Query: 10 DAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESR 69 Y YD G LT Y+ ++L T + E Sbjct: 129 GRTTAYTYDDRGNLTRVDHPDGTAATV---------EYNELNQLASVTGPDGSTSRQE-- 177 Query: 70 YLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQ---------------------------- 101 YD G + Sbjct: 178 --YDERGNPTLFTRPNGSTTRLTHGPRGQLTGVDDSLGALDRVHCDAAGLPLAVRGPLGA 235 Query: 102 VTWYGWDGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGG 161 VT Y D T D T + L R G + L + Sbjct: 236 VTRYTRDAFGRATRITDPQGRTTELEWTVEGKLARRTDPDGAQQSWTYDGEGNCLVHTDA 295 Query: 162 EDGGSVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQN-------QMDPV 214 G + + R + + ++ LA+ + ++ Sbjct: 296 VGGETRFEYTHFDLVAARTAPDGARHEFAHDTELRLAAVTDPQGLTWSYEYDSAGRLTSE 355 Query: 215 YTPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRL 269 + Y D G A + G T E D G ++ ++ + Sbjct: 356 TDFDGRTLTYAHDAMGRLSARTNGLGQTV-RYERDSAGRVITKDADGAV-TRFTY 408 Score = 67.1 bits (162), Expect = 1e-09, Method: Composition-based stats. Identities = 46/265 (17%), Positives = 77/265 (29%), Gaps = 30/265 (11%) Query: 13 YLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYLY 72 + YD R+T TD ++ T RY YDS R+V RT + + S +++ Sbjct: 22 LRFTYDADARITSWTDR---------NDSTFRYVYDSAGRVV---RTIGPDGYLSSTFVH 69 Query: 73 DPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQPGSFT 132 D G +T + + +V + D ++ + + Sbjct: 70 DVHG--------ETGAPITRYTNSVGATKVFHFN-DHLQVVAETDPLGNTTHQ-TFDRYD 119 Query: 133 PLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQ-------MLDRLESEIL 185 L+ A G + + + + V L Q E Sbjct: 120 RLLSRTDALGRTTAYTYDDRGNLTRVDHPDGTAATVEYNELNQLASVTGPDGSTSRQEYD 179 Query: 186 ADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWC 245 R S + Q+ V + HCD GLPLA+ GA Sbjct: 180 ERGNPTLFTRPNGSTTRLTHGPRGQLTGVDDSLGALDRVHCDAAGLPLAVRGPLGAVT-R 238 Query: 246 AEYDEWGNLLNEENPHQLQQLIRLP 270 D +G +P + Sbjct: 239 YTRDAFGRATRITDPQGRTTELEWT 263 Score = 64.4 bits (155), Expect = 1e-08, Method: Composition-based stats. Identities = 50/303 (16%), Positives = 80/303 (26%), Gaps = 62/303 (20%) Query: 14 LYRYDRHGRLTEKTDLIPE------------GVIRTDDERTHRYHYDSQHRLVHYTRTQY 61 Y YD G L + ++ T RY YDS R+V Sbjct: 2 RYGYDARGNLDAVINSSGRPLRFTYDADARITSWTDRNDSTFRYVYDSAGRVVRTIGPDG 61 Query: 62 ------------AEPLVESRYL--------------------YDPLGRRVAKRVWRRERD 89 +RY DPLG + R +R Sbjct: 62 YLSSTFVHDVHGETGAPITRYTNSVGATKVFHFNDHLQVVAETDPLGNTTHQTFDRYDRL 121 Query: 90 LTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQR 149 L+ +L R T Y +D T + + L V G ++ + Sbjct: 122 LSRTDALGR---TTAYTYDDRGNLTRVDHPDGTAATVEYNELNQLASVTGPDGSTSRQEY 178 Query: 150 RSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQN 209 + + + + Q+ + D + R + GL + Sbjct: 179 DERGNPTLFTRPNGSTTRLTHGPRGQL------TGVDDSLGALDRVHCDAAGLPLA---- 228 Query: 210 QMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRL 269 V P + Y D G + +G T E+ G L +P QQ Sbjct: 229 ----VRGPLGAVTRYTRDAFGRATRITDPQGRTT-ELEWTVEGKLARRTDPDGAQQSWTY 283 Query: 270 PGQ 272 G+ Sbjct: 284 DGE 286 Score = 61.7 bits (148), Expect = 6e-08, Method: Composition-based stats. Identities = 45/320 (14%), Positives = 75/320 (23%), Gaps = 64/320 (20%) Query: 9 RDAHYLYRYDRHGRLTEKT-----------DLIPEGVIRTDDERTHRYHYDSQHRLVHYT 57 Y +D GRL+ +T D + + D R+ YD L Sbjct: 359 DGRTLTYAHDAMGRLSARTNGLGQTVRYERDSAGRVITKDADGAVTRFTYDIHGHLASAV 418 Query: 58 RTQYAEPLVESRYL---------------YDPLGRRVAKRVWRR-------ERDLTGWMS 95 V YD GRR+ + DL ++ Sbjct: 419 SPDVQLSFVRDSSGRILREICNGRELANVYDETGRRLRRTTPSGAVSTWSFPADLHAELN 478 Query: 96 LSRKPQVTWYG-------------------WDG-----DRLTTIQNDRTRIQTIYQPGSF 131 S P V + +D D+ DRT Y + Sbjct: 479 ASGHPVVFEFDESGRESTRRIGDTLAIEHAYDAGGRLTDQRVRGAGDRTLQHRTYTYRAD 538 Query: 132 TPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSE 191 L V+ G + + + + Q D E Sbjct: 539 GHLTSVDDQLGGRRRLELTREGRVTGVTAENWSERYAYDEAGNQTTASSPGGGDTDGPRE 598 Query: 192 ESRRWLASCGLTVEQMQNQMDPVYTPARK------IHLYHCDHRGLPLALVSTEGATEWC 245 + G + Q V + Y D +++ + +G W Sbjct: 599 YVGTRITRAGRVRYEHDAQGRVVLRQKARLSRKPDTWHYGWDAEDHLVSVTTPDGT-RWR 657 Query: 246 AEYDEWGNLLNEENPHQLQQ 265 YD G + ++ Sbjct: 658 YVYDALGRRIAKQRLSADAT 677 Score = 57.5 bits (137), Expect = 9e-07, Method: Composition-based stats. Identities = 27/175 (15%), Positives = 42/175 (24%), Gaps = 19/175 (10%) Query: 13 YLYRYDRHGRLTEKTDLIPEGVI------------RTDDERTHRYHYDSQHRLVHYTRTQ 60 Y D GR T TD D + YD + T Sbjct: 237 TRYTRDAFGRATRITDPQGRTTELEWTVEGKLARRTDPDGAQQSWTYDGEGN--CLVHTD 294 Query: 61 YAEPLVESRYL-YDPLGRRVAKRVWRRERDLTGWMSLSRKPQ----VTWYGWDGDRLTTI 115 Y +D + R A R E + L+ Y +D T Sbjct: 295 AVGGETRFEYTHFDLVAARTAPDGARHEFAHDTELRLAAVTDPQGLTWSYEYDSAGRLTS 354 Query: 116 QNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFP 170 + D Y + L G+ + +R S + + + Sbjct: 355 ETDFDGRTLTYAHDAMGRLSARTNGLGQTVRYERDSAGRVITKDADGAVTRFTYD 409 Score = 56.0 bits (133), Expect = 3e-06, Method: Composition-based stats. Identities = 49/294 (16%), Positives = 74/294 (25%), Gaps = 61/294 (20%) Query: 9 RDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVES 68 + + Y YD GRLT +TD D RT Y +D+ RL T Sbjct: 338 QGLTWSYEYDSAGRLTSETD---------FDGRTLTYAHDAMGRLSART----NGLGQTV 384 Query: 69 RYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQP 128 RY D GR + K VT + +D +Q + Sbjct: 385 RYERDSAGRVITK---------------DADGAVTRFTYDIHGHLASAVSP-DVQLSFVR 428 Query: 129 GSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQ------------M 176 S ++R E G L+++ S P + Sbjct: 429 DSSGRILR-EICNGRELANVYDETGRRLRRTTPSGAVSTWSFPADLHAELNASGHPVVFE 487 Query: 177 LDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCD-HRGLP--- 232 D E + G + + + T + + Y D H Sbjct: 488 FDESGRESTRRIGDTLAIEHAYDAGGRLTDQRVRGAGDRTLQHRTYTYRADGHLTSVDDQ 547 Query: 233 -----LALVSTEGATE--------WCAEYDEWGN--LLNEENPHQLQQLIRLPG 271 ++ EG YDE GN + G Sbjct: 548 LGGRRRLELTREGRVTGVTAENWSERYAYDEAGNQTTASSPGGGDTDGPREYVG 601 >UniRef50_C6M9F4 Rhs family protein n=8 Tax=Neisseria RepID=C6M9F4_NEISI Length = 632 Score = 205 bits (521), Expect = 3e-51, Method: Composition-based stats. Identities = 92/416 (22%), Positives = 140/416 (33%), Gaps = 42/416 (10%) Query: 13 YLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYLY 72 Y YDR G LT TD T + YD R+ + + Sbjct: 227 RSYGYDRTGNLTHSTDQRTG---------TTHFEYDKLGRITKA---------GSELFAF 268 Query: 73 DPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQPGSFT 132 DP ++ + + +Y G+ + D Y Sbjct: 269 DPAHNILS----DGLNAIPDNRLKTYNGTTYYYDDLGNLIHRELADGEVQNYFYDLH--D 322 Query: 133 PLIRVE----TATGELAKTQRRSLADTLQQSGGED---GGSVVFPPVLVQMLDRLESEIL 185 L++ E T E +L + + ++ GS+ V L EI Sbjct: 323 QLVKAEIFKKDGTKETWFYTYDALGRRIGKGRLKNEEVSGSLENHTRFVWDGSHLLQEIH 382 Query: 186 ADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWC 245 D + Q+++ ++ H +HCD G+P + +G W Sbjct: 383 PDGRYTYIYT-DPDSYEPLAQVRDWTTEDGENRQQTHYFHCDQIGIPREMTDKDGNLLWF 441 Query: 246 AEYDEWGNLLNEEN-PHQLQQLIRLPGQQYDEESGLYYNRHRYYDPLQGRYITQDPIGLK 304 Y WG L E Q RL Q D E+GL+YN RYY+P GR++ QDPIGL Sbjct: 442 GNYTGWGRLKEETRVTDSAYQPFRLQNQYADRETGLHYNFFRYYEPDAGRFVNQDPIGLL 501 Query: 305 GGWNFYQYPLNPVQYIDSMGL--ASKYGHLNNGGYGARPNKPPTPDPSKLPDIAKQLRLP 362 GG N YQ+ N ++ID +GL +S+ G LN G + D + P Sbjct: 502 GGANPYQFASNITEWIDPLGLVKSSQSGGLNWNWKGVGDRQAHVIDNHGSVN-------P 554 Query: 363 YPIDQASSAPNVFKTFFRALSPYDYTLYCRKWVKPNLTCTPQDDSQYPGMDTKTAS 418 Q+ T +A C + + +Q G D T + Sbjct: 555 NKPKQSIFKQKPVPTVNKAWKKRMKKNRCPDSSDNDTDTYNVEMNQPIGYDRDTGA 610 Score = 92.6 bits (228), Expect = 3e-17, Method: Composition-based stats. Identities = 48/230 (20%), Positives = 63/230 (27%), Gaps = 27/230 (11%) Query: 3 PDNRIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYA 62 PDNR+ Y YD G L + D Y YD +LV + Sbjct: 283 PDNRLKTYNGTTYYYDDLGNLIHRE---------LADGEVQNYFYDLHDQLVKAEIFKKD 333 Query: 63 EPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRI 122 Y YD LGRR+ K + E T + WDG L + R Sbjct: 334 GTKETWFYTYDALGRRIGKGRLKNEEVS------GSLENHTRFVWDGSHLLQEIHPDGRY 387 Query: 123 QTIY-QPGSFTPLIRV---ETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLD 178 IY P S+ PL +V T GE + D + Sbjct: 388 TYIYTDPDSYEPLAQVRDWTTEDGENRQQTHYFHCDQIGIPREMTDKDGNLLWFGNYTGW 447 Query: 179 RLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDH 228 E E+R ++ Q Q Y D Sbjct: 448 GRLKE--------ETRVTDSAYQPFRLQNQYADRETGLHYNFFRYYEPDA 489 Score = 51.7 bits (122), Expect = 6e-05, Method: Composition-based stats. Identities = 30/235 (12%), Positives = 68/235 (28%), Gaps = 27/235 (11%) Query: 10 DAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESR 69 Y+YD G L + + Y+ +L+ + + +R Sbjct: 51 VQETAYQYDLDGNLVR----------AANCHSITCFDYNENGQLIAQHQWKVPSKEENAR 100 Query: 70 YLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQPG 129 + WR + ++ ++ Y ++G+R T+ D +I +Y Sbjct: 101 -------NGLPDTDWRDAQYDMLYLPVTE-TVRYHYDFNGNRTATVLPDGRQINYLYY-- 150 Query: 130 SFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRV 189 L ++ + +R L + ++ G+ P+ ++ ++ + Sbjct: 151 GSGHLHQISLDDEVITDIERDKLHREIYRTQGKLASRYELDPLG-RLKRQIATLNDLTEG 209 Query: 190 SEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHR-GLPLALVSTEGATE 243 + + A G T + D D R G G Sbjct: 210 GKGKTKVAAGYGQTAVKRSYGYDRTGNLTHS-----TDQRTGTTHFEYDKLGRIT 259 >UniRef50_B6A881 YenC1 n=1 Tax=Yersinia sp. MH-1 RepID=B6A881_9ENTR Length = 974 Score = 205 bits (521), Expect = 3e-51, Method: Composition-based stats. Identities = 55/365 (15%), Positives = 104/365 (28%), Gaps = 47/365 (12%) Query: 8 ARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERT--HRYHYDSQHRLVHYTRTQYAEPL 65 Y YD G + T+ + + + Y YD+ ++LV + A Sbjct: 320 RVFQDLRYTYDPVGNVLRITNDAEATRFWRNQKVVPENTYIYDTLYQLVSANGREMANIP 379 Query: 66 VESR-------------------YLYDPLGRR--VAKRVWRRERDLTGWMSLSRKPQVTW 104 +S Y YD G + T +++S+ Sbjct: 380 QQSSQLPTLSPIDNNAYTNYIRNYHYDSAGNLMQIRHTSAAANNSYTTNITVSKYSNRAV 439 Query: 105 --------------YGWDGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRR 150 + G + + + TP+ R + + + Sbjct: 440 LSSLTDDVDKVEAFFDAAGRQNQLLPGQTLSWNARGELAKVTPVAR-DGQESDSETYRYD 498 Query: 151 SLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSEESRRWL----ASCGLTVEQ 206 + + + + + + ++ + I E+ + A Sbjct: 499 ANSQRVSKMAIQQSNNNTQTRRVLYLAGLERRTIHQGNTLFETLLVVKIGEAGRAQVQAM 558 Query: 207 MQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLL---NEENPHQL 263 P ++ + + G V G EY +G Sbjct: 559 HWELGQPTEVANDELRYSYDNLIGSSGLEVDGTGQLISQEEYYPYGGTAVWMARSQREAS 618 Query: 264 QQLIRLPGQQYDEESGLYYNRHRYYDPLQGRYITQDPIGLKGGWNFYQYP-LNPVQYIDS 322 + G++ D +GLYY RYY P GR+++ DP G G N ++ NP+ D Sbjct: 619 DKAYGYSGKERDA-TGLYYYGFRYYQPWAGRWLSADPAGTIDGLNLFRMVRNNPIVLHDP 677 Query: 323 MGLAS 327 GLA Sbjct: 678 DGLAP 682 >UniRef50_B4V6T6 Rhs protein n=2 Tax=Streptomyces RepID=B4V6T6_9ACTO Length = 1263 Score = 205 bits (521), Expect = 3e-51, Method: Composition-based stats. Identities = 75/359 (20%), Positives = 111/359 (30%), Gaps = 38/359 (10%) Query: 4 DNRIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHR-----------------YH 46 RI A ++D GRL ++ +G + +R Y Sbjct: 775 GRRIGDAAALSLQHDDLGRLVDQRLTGVDGSLLQRRGYAYRADGHLVGVEDELAGARTYE 834 Query: 47 YDSQHRLVHYTRTQYAEPLVESRYLYDPLGRRVAK-------RVWRRERDLTGWMSLSRK 99 D R+ RY YD +G + T + Sbjct: 835 LDPAGRVTAVKAE-----GWSERYAYDAVGNQTEAAWPAAHPGGSDATGPRTYEGTRLTG 889 Query: 100 PQVTWYGWDGDRLTTIQNDRTRI----QTIYQPGSFTPLIRVETATGELAKTQRRSLADT 155 Y +D T++ Y+ + L V T G L + +L Sbjct: 890 AGRVRYEYDAMGRITLRQRTRLSRKPDTWRYEWDAEDRLRAVTTPDGTLWRYAYDALGRR 949 Query: 156 LQQSG-GEDGGSVVFPPVLVQMLDRL--ESEILADRVSEESRRWLASCGLTVEQMQNQMD 212 + DG ++ V L ++ D + W + Q + D Sbjct: 950 SAKRRMAADGVTLAEEITFVWDGMTLCEQTTTSPDLPHAVTLTWDHDGLQPLAQTERLAD 1009 Query: 213 PVYTPARKIHL-YHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRLPG 271 D G P LV GA W WG + + +R PG Sbjct: 1010 ADGREIDSRFFGIVTDLIGTPTELVDEAGAIAWRTRSTLWGATTWNADANAY-TPLRFPG 1068 Query: 272 QQYDEESGLYYNRHRYYDPLQGRYITQDPIGLKGGWNFYQYPLNPVQYIDSMGLASKYG 330 Q +D ESGL+YN RYYDP RY++ DP+GL N Y NP + D +GL Sbjct: 1069 QYFDPESGLHYNCFRYYDPETARYLSVDPLGLGPAPNPVAYVSNPHSWSDPLGLTPCPP 1127 Score = 82.5 bits (202), Expect = 3e-14, Method: Composition-based stats. Identities = 39/235 (16%), Positives = 57/235 (24%), Gaps = 23/235 (9%) Query: 2 WPDNRIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQY 61 + R+ Y YD GR+T + T RY +D++ RL T Sbjct: 882 YEGTRLTGAGRVRYEYDAMGRITLRQRTRLSRKPD-----TWRYEWDAEDRLRAVTTPDG 936 Query: 62 AEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDR-- 119 RY YD LGRR AKR + + + WDG L Sbjct: 937 ----TLWRYAYDALGRRSAKRRMAADGVT--------LAEEITFVWDGMTLCEQTTTSPD 984 Query: 120 --TRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQML 177 + + PL + E + + G V + Sbjct: 985 LPHAVTLTWDHDGLQPLAQTERLADADGREIDSRFFGIVTDLIGTPTELVDEAGAIAWRT 1044 Query: 178 DRLESEILADRVSEESRRWLASCGLTVEQMQNQMDP--VYTPARKIHLYHCDHRG 230 + L G + Y D G Sbjct: 1045 RSTLWGATTWNADANAYTPLRFPGQYFDPESGLHYNCFRYYDPETARYLSVDPLG 1099 Score = 72.9 bits (177), Expect = 2e-11, Method: Composition-based stats. Identities = 48/282 (17%), Positives = 76/282 (26%), Gaps = 40/282 (14%) Query: 6 RIARDAHYLYRYDRHGRLTEKTDLIPEGVIR------------TDDERTHRYHYDSQHR- 52 R A YD GRL TD + + D R YD R Sbjct: 382 RDPLGATTRSTYDTRGRLVALTDALRRTTVFGRDDEGRLVTVVRPDGRELSTGYDDDGRP 441 Query: 53 LVHYTRTQYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRL 112 LV + A R+ YD G RV++ S T Y +D Sbjct: 442 LVQTEADRTA-----WRFTYDERGNRVSRT--------------SPVGGTTRYTYDTAGG 482 Query: 113 TTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPV 172 D T + + + G + + +R L ++ + +V+ Sbjct: 483 LASVTDALGATTRVRCDRAGLPVEITDPLGAVTRYERDMLGRPVRITDALGKITVLEWTT 542 Query: 173 LVQ-----MLDRLESEILADRVSEESRRWLASCGLTVEQMQ--NQMDPVYTPARKIHLYH 225 + D D R A T + + + P + + Sbjct: 543 EGRIARRIDPDGSSQAWAYDGEGNCIRHTDALGRTTNVEYGDFDLVKARTGPDGARYSFV 602 Query: 226 CDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLI 267 D R +V+ G W YD G +E + Sbjct: 603 HDARLRLTEVVNPHG-LSWQYTYDASGMPESETDFDGRTVRY 643 Score = 70.2 bits (170), Expect = 1e-10, Method: Composition-based stats. Identities = 48/294 (16%), Positives = 74/294 (25%), Gaps = 39/294 (13%) Query: 4 DNRIA---RDAHYLYRYD----------RHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQ 50 DNRI A Y YD G LT D T D R+ YD Sbjct: 670 DNRILKEVDGAVTRYEYDYSDRLAAITGAEGTLTYLRDRFGRTREETADGRSLLRTYDEL 729 Query: 51 HRLVHYTRTQYAEPLVESRYLYDPLGRRVAKRVWR--------RERDLTGWMSLSRKPQV 102 R+V T A + + YD GRR R TG Sbjct: 730 SRVVSRTTPSGA----RAEWTYDAAGRRSELTSSRRRITFERDATGRETGRRIGDAAALS 785 Query: 103 TWYGWDG---DRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQS 159 + G D+ T + + Y + L+ VE + Sbjct: 786 LQHDDLGRLVDQRLTGVDGSLLQRRGYAYRADGHLVGVEDELAGARTYELDPAGRVTAVK 845 Query: 160 GGEDGGSVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVY---- 215 + V Q + + R + + +++ + D + Sbjct: 846 AEGWSERYAYDAVGNQTEAAWPAAHPGGSDATGPRTYEGTRLTGAGRVRYEYDAMGRITL 905 Query: 216 ------TPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQL 263 + Y D A+ + +G W YD G + Sbjct: 906 RQRTRLSRKPDTWRYEWDAEDRLRAVTTPDGTL-WRYAYDALGRRSAKRRMAAD 958 Score = 66.0 bits (159), Expect = 3e-09, Method: Composition-based stats. Identities = 37/301 (12%), Positives = 65/301 (21%), Gaps = 45/301 (14%) Query: 4 DNRIARD----AHYLYRYDRHGRLTEKTDLIPEGVIRT------------DDERTHRYHY 47 NR++R Y YD G L TD + RY Sbjct: 460 GNRVSRTSPVGGTTRYTYDTAGGLASVTDALGATTRVRCDRAGLPVEITDPLGAVTRYER 519 Query: 48 DSQHRLVHYTR-----------------TQYAEPLVESRYLYDPLGRRVAKRVWRRERDL 90 D R V T + + YD G + Sbjct: 520 DMLGRPVRITDALGKITVLEWTTEGRIARRIDPDGSSQAWAYDGEGNCIRHTDALGRTTN 579 Query: 91 TGWMS-------LSRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGE 143 + + D T + + Y + G Sbjct: 580 VEYGDFDLVKARTGPDGARYSFVHDARLRLTEVVNPHGLSWQYTYDASGMPESETDFDGR 639 Query: 144 LAKTQRRSLADTLQQSGGEDGGSVVF----PPVLVQMLDRLESEILADRVSEESRRWLAS 199 + + + + V +++ +D + D + A Sbjct: 640 TVRYVHDAAGRLVTRVNAAGQAVRVEYDALDNRILKEVDGAVTRYEYDYSDRLAAITGAE 699 Query: 200 CGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEEN 259 LT + + T + L D ++ + GA YD G + Sbjct: 700 GTLTYLRDRFGRTREETADGRSLLRTYDELSRVVSRTTPSGA-RAEWTYDAAGRRSELTS 758 Query: 260 P 260 Sbjct: 759 S 759 Score = 65.2 bits (157), Expect = 5e-09, Method: Composition-based stats. Identities = 44/282 (15%), Positives = 67/282 (23%), Gaps = 38/282 (13%) Query: 13 YLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYLY 72 + YD R+T TD + + Y YD R V A + + Y Sbjct: 299 LRFAYDERARITSWTDT---------NGCRYTYAYDDLDRCVS---QGGANGHMTLAFAY 346 Query: 73 DPLGRRVAKRVWRR------------ERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRT 120 R R + S T +D D Sbjct: 347 GGPDPRTGLRTTTTTTPDGEVCSYVVDEAYRIVESRDPLGATTRSTYDTRGRLVALTDAL 406 Query: 121 RIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRL 180 R T++ L+ V G T L Q+ + + R Sbjct: 407 RRTTVFGRDDEGRLVTVVRPDGRELSTGYDDDGRPLVQTEADRTAWRFTYDERGNRVSRT 466 Query: 181 -----ESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPA--RKIHLYHCDHRGLPL 233 + D + A T + PV + Y D G P+ Sbjct: 467 SPVGGTTRYTYDTAGGLASVTDALGATTRVRCDRAGLPVEITDPLGAVTRYERDMLGRPV 526 Query: 234 ALVSTEGATE---WCAEYDEWGNLLNEENPHQLQQLIRLPGQ 272 + G W E G + +P Q G+ Sbjct: 527 RITDALGKITVLEWTTE----GRIARRIDPDGSSQAWAYDGE 564 Score = 61.0 bits (146), Expect = 9e-08, Method: Composition-based stats. Identities = 58/395 (14%), Positives = 104/395 (26%), Gaps = 62/395 (15%) Query: 9 RDAHYLYRYDRHGRLTEKTDLIPEGVIRT------------DDERTHRYHYDSQHRLVHY 56 + + YD G TD + D + + +D++ RL Sbjct: 553 DGSSQAWAYDGEGNCIRHTDALGRTTNVEYGDFDLVKARTGPDGARYSFVHDARLRLTEV 612 Query: 57 TRTQYAEPLVESRYLYDPLGR---------RVAKRVWRRERDLTGWMSLSRKPQVTWYGW 107 + +Y YD G R + V L ++ + + Y Sbjct: 613 VNPHG----LSWQYTYDASGMPESETDFDGRTVRYVHDAAGRLVTRVNAAGQAVRVEYDA 668 Query: 108 DGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSV 167 +R+ + Y+ L + A G R T +++ Sbjct: 669 LDNRILKEVDGAVT---RYEYDYSDRLAAITGAEG-TLTYLRDRFGRTREETADGRSLLR 724 Query: 168 VFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCD 227 + + + S A+ + + R + R+I Sbjct: 725 TYDELSRVVSRTTPSGARAEWTYDAAGRRSELTSSRRRITFERDATGRETGRRI------ 778 Query: 228 HRGLPLALV---STEGATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEESGLYYNR 284 G AL G G+LL R G E L Sbjct: 779 --GDAAALSLQHDDLGRLVDQRLTGVDGSLLQRRGYA-----YRADGHLVGVEDELA--G 829 Query: 285 HRYY--DPLQGRYITQDPIGLKGGWNFYQYPLNPVQYIDSMGLASKYGHLNNGGYGARPN 342 R Y DP GR + +G Y Y D++G ++ G+ Sbjct: 830 ARTYELDPA-GRVTA---VKAEGWSERYAY--------DAVGNQTEAAWPAAHPGGSDAT 877 Query: 343 KPPTPDPSKLPDIAKQLRLPYPIDQASSAPNVFKT 377 P T + ++L A ++R Y + + Sbjct: 878 GPRTYEGTRLTG-AGRVRYEYDAMGRITLRQRTRL 911 Score = 59.8 bits (143), Expect = 2e-07, Method: Composition-based stats. Identities = 46/290 (15%), Positives = 73/290 (25%), Gaps = 41/290 (14%) Query: 12 HYLYRYDRHGRLTEK------------------TDLIPEGVIRTDDERTHRYHYDSQHRL 53 Y Y YD R + + T D Y D +R+ Sbjct: 319 RYTYAYDDLDRCVSQGGANGHMTLAFAYGGPDPRTGLRTTTTTTPDGEVCSYVVDEAYRI 378 Query: 54 VHYTRTQYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMS---------LSRKPQVTW 104 V A +R YD GR VA R + G + T Sbjct: 379 VESRDPLGA----TTRSTYDTRGRLVALTDALRRTTVFGRDDEGRLVTVVRPDGRELSTG 434 Query: 105 YGWDGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDG 164 Y DG L + DRT + + + G + + + Sbjct: 435 YDDDGRPLVQTEADRTA--WRFTYDERGNRVSRTSPVGGTTRYTYDTAGGLASVTDALGA 492 Query: 165 GSVVF-----PPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYT--P 217 + V PV + + D + R A +TV + + P Sbjct: 493 TTRVRCDRAGLPVEITDPLGAVTRYERDMLGRPVRITDALGKITVLEWTTEGRIARRIDP 552 Query: 218 ARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLI 267 + D G + G T EY ++ + P + Sbjct: 553 DGSSQAWAYDGEGNCIRHTDALGRTTN-VEYGDFDLVKARTGPDGARYSF 601 Score = 46.0 bits (107), Expect = 0.003, Method: Composition-based stats. Identities = 27/191 (14%), Positives = 51/191 (26%), Gaps = 15/191 (7%) Query: 48 DSQHRLVHYTRTQYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGW 107 D L+ + + P+ + + G R+ + P++ Y + Sbjct: 230 DRNGNLIAFEYDEEGTPVGITHHS---GGYRLRFETADGRITALH---VDGGPRILAYAY 283 Query: 108 DGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSV 167 G LT + N R + + G L + Q G ++ Sbjct: 284 TGGHLTDVTNSSGR-PLRFAYDERARITSWTDTNGCRYTYAYDDLDRCVSQGGANGHMTL 342 Query: 168 VFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCD 227 F L + E + ++ DP+ R + D Sbjct: 343 AFAYGGPDPRTGLRTTTTTTPDGEVCSYVVDEA----YRIVESRDPLGATTRSTY----D 394 Query: 228 HRGLPLALVST 238 RG +AL Sbjct: 395 TRGRLVALTDA 405 >UniRef50_UPI0001B56FBA YD repeat-containing protein n=1 Tax=Streptomyces sp. AA4 RepID=UPI0001B56FBA Length = 1624 Score = 205 bits (520), Expect = 4e-51, Method: Composition-based stats. Identities = 74/344 (21%), Positives = 117/344 (34%), Gaps = 35/344 (10%) Query: 3 PDNRIARDAHYLYRYDR---------HGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRL 53 + +D Y YR D G D+ + +Y YD RL Sbjct: 1050 ANGEFGQDRQYHYRPDGLPDRIDDGTAGSRWLAMDVRGRVISVRARGWNEQYAYDPTGRL 1109 Query: 54 VHYTRTQYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLT 113 V E D GRR G S+ + Y +D Sbjct: 1110 VDADWPAPEEE--------DRRGRR------------AGPASVITEAGGVRYTYDQAGRM 1149 Query: 114 TIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSG-GEDGGSVVFPPV 172 + Y G L+ VE G + L +++ DG +++ Sbjct: 1150 RTRRHEDGRTWTYTWGPLNRLVAVEVPDGTRWRYTYDPLGRRIRKEHFAADGTTLLERVD 1209 Query: 173 LVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQ---MDPVYTPARKIHLYHCDHR 229 + L + E+ W V +Q + + + Sbjct: 1210 FAWDGETLAEATTSGPAGAETTVWDYEPDSFVPLLQRRRTASADQQRVDEQFFAIVAEPS 1269 Query: 230 GLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEESGLYYNRHRYYD 289 G P L+ G W A +G ++ E + +R GQ +DEE+GL+YN HRYYD Sbjct: 1270 GTPTELLDDRGEIAWQARSSLFGVVVAESGGTGI--PLRFQGQYFDEETGLHYNFHRYYD 1327 Query: 290 PLQGRYITQDPIGLKGGWNFYQYPLNPVQYIDSMGLASKYGHLN 333 P+ RY++ DP+GL GG + + Y NP +D +GL + + Sbjct: 1328 PVLARYLSPDPLGLGGGLDPHAYVSNPHVSVDPLGLVGGSCNTS 1371 Score = 94.9 bits (234), Expect = 6e-18, Method: Composition-based stats. Identities = 42/265 (15%), Positives = 74/265 (27%), Gaps = 34/265 (12%) Query: 13 YLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYLY 72 + Y YD GR+ E TD + +R+HYD + R+V RT+ + + Y Sbjct: 548 FRYAYDSSGRIVEWTDR---------NGEWYRFHYDREGRVV---RTEGSGDCLTVTMEY 595 Query: 73 DPLGRRV-------AKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTI 125 D R + +R + Y WD + D + Sbjct: 596 DLAARITHVVDSLGRRSAYRLNETGRVVREVDPTGAARSYEWDALDRLVGETDELGRRRA 655 Query: 126 YQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEIL 185 Y+ L+ + G +R ++ + D + Sbjct: 656 YRYDEMNNLVALRRPDGTELTIERDDFGQAVRMVEAPGVET-------RWEYDERGNVTR 708 Query: 186 ADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWC 245 + + + V P D G P+ + GAT Sbjct: 709 VVEPGGGTTSYTYDE-------WGHIASVTDPNGSTLTVVSDDAGNPITVTDARGATTA- 760 Query: 246 AEYDEWGNLLNEENPHQLQQLIRLP 270 YD +G L +P+ + Sbjct: 761 YAYDCFGRLSAIVDPNGATEEFGYT 785 Score = 83.7 bits (205), Expect = 1e-14, Method: Composition-based stats. Identities = 43/306 (14%), Positives = 65/306 (21%), Gaps = 52/306 (16%) Query: 12 HYLYRYDRHGRLTEKTDLIPEGVIRT------------DDERTHRYHYDSQHRLVHYTRT 59 YD R+T D + Y +D+ RLV T Sbjct: 590 TVTMEYDLAARITHVVDSLGRRSAYRLNETGRVVREVDPTGAARSYEWDALDRLVGETDE 649 Query: 60 QYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRK-------PQVTWYGWDGDRL 112 Y YD + VA R + T + +D Sbjct: 650 LG----RRRAYRYDEMNNLVALRRPDGTELTIERDDFGQAVRMVEAPGVETRWEYDERGN 705 Query: 113 TTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPP- 171 T + T Y + + V G + + + + Sbjct: 706 VTRVVEPGGGTTSYTYDEWGHIASVTDPNGSTLTVVSDDAGNPITVTDARGATTAYAYDC 765 Query: 172 ---------------VLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQM----- 211 +D S S E R+ + Sbjct: 766 FGRLSAIVDPNGATEEFGYTIDGALSWHRLPDGSTEEWRYDGEGNNRLHSDAASAITQRE 825 Query: 212 -------DPVYTPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQ 264 P Y D A+ + +G W EYD GNL E + Sbjct: 826 MTHFDLVSAEIRPDGTRLEYTYDTELRLTAVTNEQGQ-VWRYEYDLAGNLSRETDFGGAS 884 Query: 265 QLIRLP 270 R Sbjct: 885 SSYRYN 890 Score = 77.9 bits (190), Expect = 8e-13, Method: Composition-based stats. Identities = 78/518 (15%), Positives = 141/518 (27%), Gaps = 87/518 (16%) Query: 5 NRIARDAHYLYRYDRHGR----------LTEK--TDLIPEGVIRTDDERTHRYHYDSQHR 52 +R+ + +RYD G +T++ T D Y YD++ R Sbjct: 793 HRLPDGSTEEWRYDGEGNNRLHSDAASAITQREMTHFDLVSAEIRPDGTRLEYTYDTELR 852 Query: 53 LVHYTRTQYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQ---------VT 103 L T Q RY YD G + + + + + Sbjct: 853 LTAVTNEQG----QVWRYEYDLAGNLSRETDFGGASSSYRYNAAGELTEIRNAEGEVITL 908 Query: 104 WYGWDGDRLTT-IQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGE 162 G+ + ++ ++T ++ LI ++ T + R + + ++++ Sbjct: 909 RRDVRGNLVEEIVEGPSGTLRTRFEYDVLGELIALDDGT-TRIEYTRDAASRIVRETVNG 967 Query: 163 DGGSVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIH 222 F D ++I S W ++ A + Sbjct: 968 RTVRSEF--------DSSGNQIRRQTPSGAESVWEYREASVPAAVR--------AAGRTT 1011 Query: 223 LYHCDHRGL-PLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEESGLY 281 + D G + + + A + G L + Q + GL Sbjct: 1012 RFEYDPAGRETVRVFGQDAAIL--RSWTPAGRLARQAVRSA-NGEFGQDRQYHYRPDGLP 1068 Query: 282 YNRHRYYDPLQG-RYITQDPIG-----LKGGWNFYQYPLNPV-QYIDSMGLASKYGHLNN 334 R D G R++ D G GWN QY +P + +D+ A + Sbjct: 1069 D---RIDDGTAGSRWLAMDVRGRVISVRARGWNE-QYAYDPTGRLVDADWPAPEEEDRRG 1124 Query: 335 GGYGARPNKPPTPDPSKLPDIAKQLRLPYPIDQASSAPN--------VFKTFFRALSPYD 386 G D A ++R D + + Y Sbjct: 1125 RRAGPASVITEAGGVRYTYDQAGRMRTRRHEDGRTWTYTWGPLNRLVAVEVPDGTRWRYT 1184 Query: 387 YTLYCRKWVKPNL-----TCTPQDDSQYPGMDTKTASDYLPQTNWPT------------- 428 Y R+ K + T + D + G A+ P T Sbjct: 1185 YDPLGRRIRKEHFAADGTTLLERVDFAWDGETLAEATTSGPAGAETTVWDYEPDSFVPLL 1244 Query: 429 ---TQLPPGYTCAEPYLFPDINKPDGPATAGIDDLGEI 463 + F + +P G T +DD GEI Sbjct: 1245 QRRRTASADQQRVDEQFFAIVAEPSGTPTELLDDRGEI 1282 Score = 74.1 bits (180), Expect = 1e-11, Method: Composition-based stats. Identities = 37/270 (13%), Positives = 67/270 (24%), Gaps = 35/270 (12%) Query: 12 HYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYL 71 + YD G +T + T Y YD + T + V S Sbjct: 695 ETRWEYDERGNVTRVVE---------PGGGTTSYTYDEWGHIASVTDPNGSTLTVVS--- 742 Query: 72 YDPLGRRVAKRVWRRERDLTGWM---------SLSRKPQVTWYGWDGDRLTTIQNDRTRI 122 D G + R + + + Y DG D + Sbjct: 743 -DDAGNPITVTDARGATTAYAYDCFGRLSAIVDPNGATEEFGYTIDGALSWHRLPDGSTE 801 Query: 123 QTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLES 182 + Y L + + + D + DG + + L + + Sbjct: 802 EWRYDGEGNNRL---HSDAASAITQREMTHFDLVSAEIRPDGTRLEYTYDTELRLTAVTN 858 Query: 183 E------ILADRVSEESRRWLASCGLTVEQMQNQMD--PVYTPARKIHLYHCDHRGLPLA 234 E D SR + + + + ++ D RG + Sbjct: 859 EQGQVWRYEYDLAGNLSRETDFGGASSSYRYNAAGELTEIRNAEGEVITLRRDVRGNLVE 918 Query: 235 LV--STEGATEWCAEYDEWGNLLNEENPHQ 262 + G EYD G L+ ++ Sbjct: 919 EIVEGPSGTLRTRFEYDVLGELIALDDGTT 948 Score = 50.2 bits (118), Expect = 2e-04, Method: Composition-based stats. Identities = 65/446 (14%), Positives = 110/446 (24%), Gaps = 53/446 (11%) Query: 13 YLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYLY 72 ++ DRHG + + L T PLV Y Sbjct: 482 IHFQRDRHGTPIAMRHSGGYLIQIATEGGLVT------G-LSTVTGDGVEVPLVRYGYT- 533 Query: 73 DPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQPGSFT 132 G ++ Y +D DR + Sbjct: 534 --DGNLTE--------------IVNESGLPFRYAYDSSGRIVEWTDRNGEWYRFHYDREG 577 Query: 133 PLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVF--PPVLVQMLDRLESEILADRVS 190 ++R E + L T LA + G + + + + Sbjct: 578 RVVRTEGSGDCLTVTMEYDLAARITHVVDSLGRRSAYRLNETGRVVREVDPTGAARSYEW 637 Query: 191 EESRRWLASCGLTVEQMQNQMD------PVYTPARKIHLYHCDHRGLPLALVSTEGATEW 244 + R + + + D + P D G + +V G E Sbjct: 638 DALDRLVGETDELGRRRAYRYDEMNNLVALRRPDGTELTIERDDFGQAVRMVEAPG-VET 696 Query: 245 CAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEESGLYYNRHRYYDPLQGRYI--TQD--- 299 EYDE GN+ P DE + + DP + D Sbjct: 697 RWEYDERGNVTRVVEPGGGTTSYTY-----DE----WGHIASVTDPNGSTLTVVSDDAGN 747 Query: 300 PIGL---KGGWNFYQY-PLNPVQYI-DSMGLASKYGHLNNGGY-GARPNKPPTPDPSKLP 353 PI + +G Y Y + I D G ++G+ +G R T + Sbjct: 748 PITVTDARGATTAYAYDCFGRLSAIVDPNGATEEFGYTIDGALSWHRLPDGSTEEWRYDG 807 Query: 354 DIAKQLRLPYPIDQASSAPNVFKTFFRALSPYDYTLYCRKWVKPNLTCTPQDDSQYPGMD 413 + +L F + P L + LT + Q + Sbjct: 808 EGNNRLHSDAASAITQREMTHFDLVSAEIRPDGTRLEYTYDTELRLTAVTNEQGQVWRYE 867 Query: 414 TKTASDYLPQTNWPTTQLPPGYTCAE 439 A + +T++ Y A Sbjct: 868 YDLAGNLSRETDFGGASSSYRYNAAG 893 >UniRef50_B4UIF2 YD repeat protein n=1 Tax=Anaeromyxobacter sp. K RepID=B4UIF2_ANASK Length = 2350 Score = 205 bits (520), Expect = 5e-51, Method: Composition-based stats. Identities = 73/332 (21%), Positives = 112/332 (33%), Gaps = 33/332 (9%) Query: 15 YRY----DRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRY 70 Y Y D GR+T K++ I T Y YD RL R + + Y Sbjct: 1934 YAYAVSRDASGRITGKSETIQGTTA------TWVYGYDDAGRLTTVRR----DGRQVASY 1983 Query: 71 LYDPLGRRVAKRVWRRERDLTGWMSLSRKP-QVTWYGWDGDRLTTIQNDRTRIQTIYQPG 129 YD G R+ + + R + + + + ++ R Y Sbjct: 1984 GYDDNGNRLLRTIERGTESGSYDDQDRLATYGGYTFSYGANGELASRSAGGRTTW-YDYD 2042 Query: 130 SFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRV 189 L V G L + L + + +L D Sbjct: 2043 PLGNLRAVRLPDGALLEYVVDGLNRRVGKKVNGAQL------EGFLYEGQLRPVAWLDGS 2096 Query: 190 SEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTE-GATEWCAEY 248 + R++ + V + + + DH G P +V+ GA +Y Sbjct: 2097 GQVYARFVYGLHVNVPEYMVTAAGTFR-------FLTDHLGSPRLVVNASTGAVVQRIDY 2149 Query: 249 DEWGNLLNEENPHQLQQLIRLPGQQYDEESGLYYNRHRYYDPLQGRYITQDPIGLKGGWN 308 DEWG +L + NP Q G YD ++GL R YDP GR+ +D +GG N Sbjct: 2150 DEWGQVLADSNPGF--QPFGFAGGLYDRDTGLVRFGARDYDPTVGRWTAKDRSRFRGGLN 2207 Query: 309 FYQY-PLNPVQYIDSMGLASKYGHLNNGGYGA 339 FY+Y +PV ++D G G GA Sbjct: 2208 FYEYAASDPVNFVDPTGNYFAPPPAAGVGIGA 2239 Score = 54.8 bits (130), Expect = 7e-06, Method: Composition-based stats. Identities = 42/301 (13%), Positives = 69/301 (22%), Gaps = 52/301 (17%) Query: 6 RIARDAHYLYRYDRHGRL------TEKTDLIPEGVIR-----TDDERTHRYHYDSQHRLV 54 ++ +++D GRL T L + R RT YD+ ++V Sbjct: 1653 QLPGIERLAFQHDSSGRLQAVVQGTRIATLEYDSAGRPWRVTDPIGRTTELRYDAGDQVV 1712 Query: 55 HYTRTQYAEPLVESRYLYDPLGRRVAKRVWRRE------------RDLTGWMSLSRKPQV 102 ++ D G + R T + + Sbjct: 1713 SQVLPDGRTVGLDH----DASGNLTSVTPPGRPPHGFDHGPADLLSAYTPPFAPATDLLA 1768 Query: 103 TWYGWDGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGE 162 T Y +D D R ++ L + T G + + L Sbjct: 1769 TGYAYDLDGDLAQVLLPDRNAIVFGRDPAGRLSSLTTQYG--TSSVGYDTSGRLASIVTH 1826 Query: 163 DGGSVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIH 222 DG S+ + SE W + PV + Sbjct: 1827 DGPSLSWTYD----GHLPSSETTTGESVTGIVGWSYDNDFRIATSAVNGVPVS------Y 1876 Query: 223 LYHCDHR----GLPLALVSTE---------GATEWCAEYDEWGNLLNEENPHQLQQLIRL 269 Y D G G+ A YD +G+L Sbjct: 1877 QYDADGLLTYAGALRIARDPSTGMISGTTLGSVSTSAGYDAYGDLERFAASAGGISAYAY 1936 Query: 270 P 270 Sbjct: 1937 A 1937 Score = 50.2 bits (118), Expect = 2e-04, Method: Composition-based stats. Identities = 24/189 (12%), Positives = 46/189 (24%), Gaps = 13/189 (6%) Query: 41 RTHRYHYDSQHRLVHYTRTQY-------AEPLVESRYLYDPLGRRVAKRVWRRERDLTGW 93 H + YD RL T + + P G+R A V + Sbjct: 1382 VVHSFAYDDAGRLSTVTDRDGQVTRIERGGGVPTAIVA--PHGQRTALTVDANGYLAS-- 1437 Query: 94 MSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAK-TQRRSL 152 ++ K + Y +D + L D + ++ + L+ G ++ Sbjct: 1438 -IVNPKGESRHYVYDANGLMQTYMDPRGLAHAFEHDALGRLVLDTNPAGGSKTLSRTDRP 1496 Query: 153 ADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMD 212 G + V V + + D + T Sbjct: 1497 GGYAVSVTTALGRTTVHDVQGVSAGQEVRTLTRPDGTGTTTTASARGERTTSASDGTSTA 1556 Query: 213 PVYTPARKI 221 P + Sbjct: 1557 ETLGPDPQF 1565 Score = 48.7 bits (114), Expect = 4e-04, Method: Composition-based stats. Identities = 38/303 (12%), Positives = 61/303 (20%), Gaps = 49/303 (16%) Query: 16 RYDRHGRLTEKTDLIPEGVIRT------------DDERTHRYHYDSQHRLVHYTRT---- 59 YD GR TD I D RT +D+ L T Sbjct: 1683 EYDSAGRPWRVTDPIGRTTELRYDAGDQVVSQVLPDGRTVGLDHDASGNLTSVTPPGRPP 1742 Query: 60 ------------------QYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQ 101 A L+ + Y YD G + R + G R Sbjct: 1743 HGFDHGPADLLSAYTPPFAPATDLLATGYAYDLDGDLAQVLLPDRNAIVFGRDPAGRLSS 1802 Query: 102 VTW--------YGWDGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLA 153 +T Y G + + +D + Y + + + + Sbjct: 1803 LTTQYGTSSVGYDTSGRLASIVTHDGPSLSWTYDGHLPSSETTTGESVTGIVGWSYDNDF 1862 Query: 154 DTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQM-- 211 + S + + S L S + Sbjct: 1863 RIATSAVNGVPVSYQYDADGLLTYAGALRIARDPSTGMISGTTLGSVSTSAGYDAYGDLE 1922 Query: 212 ---DPVYTPARKIHLYHCDHRGLPLA--LVSTEGATEWCAEYDEWGNLLNEENPHQLQQL 266 + + D G W YD+ G L + Sbjct: 1923 RFAASAGGISAYAYAVSRDASGRITGKSETIQGTTATWVYGYDDAGRLTTVRRDGRQVAS 1982 Query: 267 IRL 269 Sbjct: 1983 YGY 1985 Score = 48.3 bits (113), Expect = 7e-04, Method: Composition-based stats. Identities = 43/293 (14%), Positives = 72/293 (24%), Gaps = 47/293 (16%) Query: 1 MWPDNRIARDAHYLYRYDRHGRLTEKT-----------------DLIPEGVIRTDDERTH 43 + PD R +D G LT T D Sbjct: 1715 VLPDGRTVGL-----DHDASGNLTSVTPPGRPPHGFDHGPADLLSAYTPPFAPATDLLAT 1769 Query: 44 RYHYDSQHRLVHYTRTQYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVT 103 Y YD L + DP G R++ + G+ + R + Sbjct: 1770 GYAYDLDGDLAQVLLPDRNAIVFGR----DPAG-RLSSLTTQYGTSSVGYDTSGRLASIV 1824 Query: 104 WYG-------WDGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETA--TGELAKTQRRSLAD 154 + +DG ++ + I S+ R+ T+ G Q + Sbjct: 1825 THDGPSLSWTYDGHLPSSETTTGESVTGIVGW-SYDNDFRIATSAVNGVPVSYQYDADGL 1883 Query: 155 TLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPV 214 + L + + D + R ++ G++ D Sbjct: 1884 LTYAGALRIARDPSTGMISGTTLGSVSTSAGYDAYGDLERFAASAGGISAYAYAVSRDAS 1943 Query: 215 YTPARK---------IHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEE 258 K +Y D G V +G YD+ GN L Sbjct: 1944 GRITGKSETIQGTTATWVYGYDDAGRLT-TVRRDGRQVASYGYDDNGNRLLRT 1995 Score = 46.3 bits (108), Expect = 0.003, Method: Composition-based stats. Identities = 32/211 (15%), Positives = 53/211 (25%), Gaps = 26/211 (12%) Query: 5 NRIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEP 64 +R+A Y + Y +G L ++ RT Y YD L A Sbjct: 2009 DRLATYGGYTFSYGANGELASRS----------AGGRTTWYDYDPLGNLRAVRLPDGALL 2058 Query: 65 LVESRYLYDPLGRRVAKRVWRRERDLTGW----------MSLSRKPQVTWYGWDGDRLTT 114 D L RRV K+V + + + + YG + Sbjct: 2059 EYVV----DGLNRRVGKKVNGAQLEGFLYEGQLRPVAWLDGSGQVYARFVYGLHVNVPEY 2114 Query: 115 IQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLV 174 + + + L+ V +TG + + + F + Sbjct: 2115 MVTAAGTFRFLTDHLGSPRLV-VNASTGAVVQRIDYDEWGQVLADSNPGFQPFGFAG-GL 2172 Query: 175 QMLDRLESEILADRVSEESRRWLASCGLTVE 205 D A RW A Sbjct: 2173 YDRDTGLVRFGARDYDPTVGRWTAKDRSRFR 2203 >UniRef50_A7FDK7 YD/RHS repeat protein n=25 Tax=Enterobacteriaceae RepID=A7FDK7_YERP3 Length = 1527 Score = 204 bits (518), Expect = 7e-51, Method: Composition-based stats. Identities = 85/468 (18%), Positives = 141/468 (30%), Gaps = 68/468 (14%) Query: 12 HYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYL 71 + ++YDR + D +Y YD ++V ++ ++ Sbjct: 1061 NRSWQYDRAYNVVGMDDGRWG---------KTQYQYDRNDQVVRADF--GGFLPLQEQFS 1109 Query: 72 YDPLGRRVAKRVWRRERDLTGWMSLS---------RKPQVTWYGWDGDRLTTIQNDRTRI 122 YD R R + R Y G RL ++ + Sbjct: 1110 YDVNQNLREHRCLPRGAQAVLAQASQQQQAGRVVKRGDSEYRYDA-GGRLVEKRSQKDGY 1168 Query: 123 Q---TIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDG--------------- 164 + Y+ L + T TG + + +++ D Sbjct: 1169 RPQLWRYRWNEQDQLSELITPTGARWRYGYDAFGRRIRKLRVVDTPPLNEMDAPSTGPAT 1228 Query: 165 ---GSVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKI 221 + Q+++ + E+ WL + G + K+ Sbjct: 1229 ASLAGYAYLWSGDQLIEEVPVYADGTVAYEQGIHWLYAPGGLTPMARY-------AQGKL 1281 Query: 222 HLYHCDHRGLPLALVSTEGATEWCAEYDEWGN----LLNEENPHQLQQLIRLPGQQYDEE 277 H DH G P L++ +G W + WG ++ +R GQ D E Sbjct: 1282 HYVVADHLGTPRELLNEQGKVVWASRLSTWGQAELWRQAANEEDRVSCNLRFAGQYADAE 1341 Query: 278 SGLYYNRHRYYDPLQGRYITQDPIGLKGGWNFYQYPLNPVQYIDSMGLASKYGHLNNGGY 337 SGL+YNR RYYD G+Y+ DPIGL GG N Y Y NPV+Y+D +GL Sbjct: 1342 SGLHYNRFRYYDGETGQYLCPDPIGLAGGLNPYGYVHNPVKYVDPLGLCKTDVARERQAQ 1401 Query: 338 GARPNKPPTPDPSKLPD-----------IAKQLRLPYPIDQASSAPNVFKTFFRALSPYD 386 + + P K+ L Y + + K+ ++ Sbjct: 1402 MLQDDVGYNISPKSWDQFPSIGRDGSFITDKKGALKYFNGMQTGNVTISKSVAASIEKDM 1461 Query: 387 YTLYCRKWVKPNLTCTPQDDSQYPGMDTKTASDYLPQTNWPTTQLPPG 434 N+ + P +L P LP G Sbjct: 1462 GLSLGSLNGGFNIRKIDGISNMQPRSPLSGNDYFLG----PGQHLPGG 1505 Score = 77.2 bits (188), Expect = 1e-12, Method: Composition-based stats. Identities = 54/262 (20%), Positives = 73/262 (27%), Gaps = 27/262 (10%) Query: 5 NRIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEP 64 R+ + YRYD GRL EK + RY ++ Q +L A Sbjct: 1140 GRVVKRGDSEYRYDAGGRLVEKRSQKDGYRPQL-----WRYRWNEQDQLSELITPTGA-- 1192 Query: 65 LVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQV-----TWYGWDGDRLTTI---- 115 RY YD GRR+ K L + S P Y W GD+L Sbjct: 1193 --RWRYGYDAFGRRIRKLRVVDTPPLNEMDAPSTGPATASLAGYAYLWSGDQLIEEVPVY 1250 Query: 116 ----QNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPP 171 I +Y PG TP+ R T ++ E G V Sbjct: 1251 ADGTVAYEQGIHWLYAPGGLTPMARY---AQGKLHYVVADHLGTPRELLNEQGKVVWASR 1307 Query: 172 VLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGL 231 + L + + A E + Y D GL Sbjct: 1308 LSTWGQAELWRQAANEEDRVSCNLRFAGQYADAESGLHYNRFRYYDGETGQYLCPDPIGL 1367 Query: 232 PLALVSTEGATEWCAEY-DEWG 252 L + G +Y D G Sbjct: 1368 AGGL-NPYGYVHNPVKYVDPLG 1388 Score = 62.1 bits (149), Expect = 4e-08, Method: Composition-based stats. Identities = 46/298 (15%), Positives = 84/298 (28%), Gaps = 41/298 (13%) Query: 6 RIARDAHYLYRYDRHGRLTEK-------------TDLIPEGVIRTDDERTHRYHYDSQHR 52 R RYD GR+ D + R + YHY+ + Sbjct: 541 RDTDSTDVAVRYDISGRVVALKTSTGFFADHFIYHDKERYTIYRDGEGGETGYHYNENNL 600 Query: 53 LVHYTRTQYAEPLVESRYLY-----DPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGW 107 L+ L + D LG R+ + ++ DLT + T Y + Sbjct: 601 LIKLVDPLGNITLTDWDLTQKIKETDALG-RITRFIYNERGDLTAVIHPDET--RTEYEY 657 Query: 108 DGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSV 167 + + T YQ L +V +G+ + + L++ ED Sbjct: 658 NPSGVVTAFTSSAGDSWQYQYDRQGLLRQVTYPSGQTMSFRYGKKGEVLRKIIAEDQVWR 717 Query: 168 VFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCD 227 + ++ + + V+ + L S + ++ H D Sbjct: 718 YHYDHHGCLSTIIDPKGNSTAVTLDVLGRLFSHQNALGEL-------------TRYTHSD 764 Query: 228 HR----GLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEESGLY 281 G +V +G E YD + + G +D +GL Sbjct: 765 AHASPAGSVTKMVMPDG-VEQAIAYDSEKRIAALTDGAGKTTRYEYGG--FDLLTGLI 819 Score = 60.2 bits (144), Expect = 2e-07, Method: Composition-based stats. Identities = 29/191 (15%), Positives = 54/191 (28%), Gaps = 41/191 (21%) Query: 5 NRIARDAHYLYRY--DRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQ-- 60 N++ + YRY DR G++ +TD RT Y YD+ R + Sbjct: 837 NQVTNASGDTYRYTRDRAGQVISETD---------FTGRTVHYQYDAVGRRIGARYPDQR 887 Query: 61 -----------------------YAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLS 97 + + Y YD GR ++ + + Sbjct: 888 LVRWHYSMQDQVLAQQTWHCDALSSTLVGTVSYGYDRAGRLLSATNADAVVEFDYDEAGQ 947 Query: 98 -----RKPQVTWYGWDGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSL 152 + + WD T + + + G+ L R++ A + + Q L Sbjct: 948 LVAERLNGREVRHQWDALNGTPVARQVGELGLTFVYGAQGELTRLQLAGHQPLQLQHDRL 1007 Query: 153 ADTLQQSGGED 163 + Sbjct: 1008 GRETVRESAAG 1018 Score = 56.4 bits (134), Expect = 3e-06, Method: Composition-based stats. Identities = 39/269 (14%), Positives = 63/269 (23%), Gaps = 48/269 (17%) Query: 7 IARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHY-DSQHRLVHYTRTQ----- 60 IA D + Y YD HG L+ D T D + + ++ L YT + Sbjct: 710 IAEDQVWRYHYDHHGCLSTIIDPKGNSTAVTLDVLGRLFSHQNALGELTRYTHSDAHASP 769 Query: 61 ----------------------------YAEPLVESRYLYDPLGRRVAKRVWRRERDLTG 92 +RY Y +R G Sbjct: 770 AGSVTKMVMPDGVEQAIAYDSEKRIAALTDGAGKTTRYEYGGFDLLTGLIRPDGQRLTFG 829 Query: 93 WMSLSRKPQ-------VTWYGWDGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELA 145 + +L+R Q Y D + D T YQ + I L Sbjct: 830 YDTLTRLNQVTNASGDTYRYTRDRAGQVISETDFTGRTVHYQYDAVGRRIGARYPDQRLV 889 Query: 146 KTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVE 205 + L Q V +L+ ++ + + Sbjct: 890 RWHYSMQDQVLAQQTWHCDALSSTLVGTVSYGYDRAGRLLSATNADAVVEFDYDEAGQLV 949 Query: 206 QMQNQMDPVYTPARKIHLYHCDHRGLPLA 234 + V + G P+A Sbjct: 950 AERLNGREVRHQWDAL-------NGTPVA 971 Score = 53.3 bits (126), Expect = 2e-05, Method: Composition-based stats. Identities = 41/302 (13%), Positives = 79/302 (26%), Gaps = 67/302 (22%) Query: 10 DAHYLYRYDRHGRLTEKT----------DLIPEGVIRTDDERTHRYHYDSQH-------- 51 Y YDR GRL T D + V + R R+ +D+ + Sbjct: 915 VGTVSYGYDRAGRLLSATNADAVVEFDYDEAGQLVAERLNGREVRHQWDALNGTPVARQV 974 Query: 52 -------------------------------RLVHYTRTQYAEPLVES-RYL------YD 73 RL T + A +++ Y + Sbjct: 975 GELGLTFVYGAQGELTRLQLAGHQPLQLQHDRLGRETVRESAAGFIQACNYTPSGLLAHQ 1034 Query: 74 PLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQPGSFTP 133 GR A + + + S + Y + + +D +T YQ Sbjct: 1035 AAGRNSALFQQQLIAPESPALHGSAVNRSWQYDRAYNVVGM--DDGRWGKTQYQYDRNDQ 1092 Query: 134 LIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSEES 193 ++R + + Q + + + + + V Sbjct: 1093 VVRADFGGFLPLQEQFSYDVNQ-----NLREHRCLPRGAQAVLAQASQQQQAGRVVKRGD 1147 Query: 194 RRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGN 253 + G + + ++Q D + D L++ GA W YD +G Sbjct: 1148 SEYRYDAGGRLVEKRSQKDGYRPQLWRYRWNEQDQL---SELITPTGA-RWRYGYDAFGR 1203 Query: 254 LL 255 + Sbjct: 1204 RI 1205 Score = 46.3 bits (108), Expect = 0.002, Method: Composition-based stats. Identities = 56/393 (14%), Positives = 101/393 (25%), Gaps = 38/393 (9%) Query: 79 VAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQPGSFTPLIRVE 138 + + + L S Y G + D T + Y ++ Sbjct: 505 LLQSTFSERGYLVQCQSFQYGTLSHEYDPKGYMVRWRDTDSTDVAVRYDISGRVVALKTS 564 Query: 139 TATGELAKTQRRSLADTLQQ--SGGEDGGSVVFPPVLVQMLDRLESEILADRVSEESRRW 196 T T+ + GGE G +L++++D L + L D + + Sbjct: 565 TGFFADHFIYHDKERYTIYRDGEGGETGYHYNENNLLIKLVDPLGNITLTDWDLTQKIKE 624 Query: 197 LASCGLTVEQMQNQMDPVYT---PARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGN 253 + G + N+ + P Y + G+ A S+ G W +YD G Sbjct: 625 TDALGRITRFIYNERGDLTAVIHPDETRTEYEYNPSGVVTAFTSSAGD-SWQYQYDRQGL 683 Query: 254 LLNEENPHQLQQLIRLPGQ-QYDEESGLYYNRHRY-YDPLQGRYITQDPIGLKGGWNFYQ 311 L P R + + + RY YD DP G Sbjct: 684 LRQVTYPSGQTMSFRYGKKGEVLRKIIAEDQVWRYHYDHHGCLSTIIDPKGNSTAVTL-- 741 Query: 312 YPLNPVQYIDSMG--------------LASKYGHLNNGGYGARPNKPPTPDPSKLPDIAK 357 D +G H + G + P + + D K Sbjct: 742 ---------DVLGRLFSHQNALGELTRYTHSDAHASPAGSVTKMVMPDGVEQAIAYDSEK 792 Query: 358 QLRLPYPIDQASSAPNV--FKTFFRALSPYDYTLYCRKWVKPNLTCTPQDDSQYPGMDTK 415 ++ ++ F + P L L Sbjct: 793 RIAALTDGAGKTTRYEYGGFDLLTGLIRPDGQRLTFGYDTLTRLNQVTNASGDTYRYTRD 852 Query: 416 TASDYLPQTNWPTTQLPPGYTCAEPYL---FPD 445 A + +T++ + Y + +PD Sbjct: 853 RAGQVISETDFTGRTVHYQYDAVGRRIGARYPD 885 >UniRef50_C5ALM7 YD repeat protein n=19 Tax=Proteobacteria RepID=C5ALM7_BURGB Length = 1425 Score = 204 bits (518), Expect = 8e-51, Method: Composition-based stats. Identities = 81/380 (21%), Positives = 124/380 (32%), Gaps = 32/380 (8%) Query: 13 YLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYLY 72 Y YD G L E D + + ++ YD L + + Sbjct: 973 RNYGYDAAGELAESHDSLRG---------STQFSYDPAGYLTQ---RVNTADRQLESFAW 1020 Query: 73 DPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQPGSFT 132 D G + R + G + Y G+ T ++ R Q + Sbjct: 1021 DAAGNLLDDAQRRSRGYVEGNRLRMWQNLRFEYDPFGNLATKLRGANQRQQ--FTYDGQD 1078 Query: 133 PLIRVETATGEL---AKTQRRSLADTLQQSGGEDGGSVV----FPPVLVQMLDRLESEIL 185 L+ V T + L + ++ V V RL E+ Sbjct: 1079 RLVAVRTQDARGVVETRFAYDPLGRRIAKTDIVRDARGVALREETKRFVWEGLRLAQEVR 1138 Query: 186 ADRVSEESRRWLA-------SCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVST 238 VS A + E M A +I+ +H D G P + Sbjct: 1139 DTGVSSYVYSPDAPYTPAARVDAVLAEAMAAAAIEQARQATRIYHFHTDVSGAPQEATNE 1198 Query: 239 EGATEWCAEYDEWGNLLNEEN-PHQLQQLIRLPGQQYDEESGLYYNRHRYYDPLQGRYIT 297 G W +Y WG + ++ P ++ Q +R GQ D+ + L+YN R+YDP GR+I Sbjct: 1199 AGDIVWAGQYSAWGKVAPNQHAPARIDQPLRYAGQYADDSTELHYNTFRFYDPDVGRFIN 1258 Query: 298 QDPIGLKGGWNFYQYPLNPVQYIDSMGLASKYG---HLNNGGYGARPNKPPTPDPSKLPD 354 QDPIGL GG N YQY N + + D GLA Y + + N + Sbjct: 1259 QDPIGLMGGLNLYQYAPNSIAWTDWWGLAGSYTLGSYQISAPQLPAYNGQTVGTFYYVNG 1318 Query: 355 IAKQLRLPYPIDQASSAPNV 374 + + PN Sbjct: 1319 AGGLESRTFSSGGPTPYPNY 1338 Score = 60.6 bits (145), Expect = 1e-07, Method: Composition-based stats. Identities = 38/273 (13%), Positives = 71/273 (26%), Gaps = 39/273 (14%) Query: 7 IARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRL-VHYTRTQYAEPL 65 + + + YD GR+ +TD + YD R V + Sbjct: 538 LPGERTVTFEYDDAGRIVAETDPLGRTTKTR---------YDGNSRRPVEIIAPDGS--- 585 Query: 66 VESRYLYDPLGRRVAKRVWRRERDLTGWMS---------LSRKPQVTWYGWDGDRLTTIQ 116 YD GR +A R + + + + W+ Sbjct: 586 -AWHAEYDRQGRLLATRDPLDRENRYEYPKALSALPIAHVDALGGRKTFEWNRLGELVAY 644 Query: 117 NDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQM 176 D + T +F + E A G R + + + + M Sbjct: 645 TDCSGKTTRNFYDAFGLPLARENALGHRVTFDLRPTGEARRVTYPDGSTESYEYDAAGLM 704 Query: 177 LDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALV 236 + + + + + Q+ PA + Y D G L Sbjct: 705 IRHVGLGGRTQ--------------IALRNARGQIVEAVDPAGRRTCYRYDAEGRLREL- 749 Query: 237 STEGATEWCAEYDEWGNLLNEENPHQLQQLIRL 269 +G + Y G L +E P +++ Sbjct: 750 -QQGHARYAFTYSAGGRLTSETRPDGVRRRFEY 781 Score = 57.9 bits (138), Expect = 7e-07, Method: Composition-based stats. Identities = 63/496 (12%), Positives = 117/496 (23%), Gaps = 98/496 (19%) Query: 8 ARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVH------YTRTQY 61 + DR G L + RY D+ RL+ Sbjct: 804 RPVRTIRFERDRMGNLCAQHTPTE----------VTRYTRDTGGRLLEVACVPTAAGLAL 853 Query: 62 AEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDG-DRLTTIQNDRT 120 + YD GR A+ Y D D + + Sbjct: 854 GIAPDTLTFEYDKAGRLSAE---------------HGANGSVRYTLDALDNVMKLALPHE 898 Query: 121 RIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFP--PVLVQMLD 178 + + + GS + ++ ++ +R L L ++ G + + Sbjct: 899 QTLQMLRYGS-GHVHQIRCGDQVVSDFERDDLHRELTRTQGRLTERTAYDLLGRKIWQSA 957 Query: 179 RLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALV-- 236 + + LA + R + + + + + + Y + Sbjct: 958 GFQPDALARGQGQVWRNYGYDAAGELAESHDSLRGSTQFSYDPAGYLTQRVNTADRQLES 1017 Query: 237 ---STEGATEW---------------------CAEYDEWGNLLNEENPHQLQQLIRLPGQ 272 G EYD +GNL + +Q GQ Sbjct: 1018 FAWDAAGNLLDDAQRRSRGYVEGNRLRMWQNLRFEYDPFGNLATKLRGANQRQQFTYDGQ 1077 Query: 273 QYDEESGLYYNRHRYYDPLQGRYITQDPIGLKGGWNFYQYPLNPVQYIDSMGLASKYGHL 332 TQD G+ + Y D +G + Sbjct: 1078 DRLVAVR-----------------TQDARGVVET--RFAY--------DPLGRRIAKTDI 1110 Query: 333 NNGGYGARPNKPPTPDPSKLPDIAKQLRLPYPIDQASSAPNVFKTFFRALSPYDYTLYCR 392 G + + +A+++R + +P+ T + Sbjct: 1111 VRDARGVALREETKRFVWEGLRLAQEVRDT-GVSSYVYSPDAPYTPAARVDAVLAEAMAA 1169 Query: 393 KW-----VKPNLTCTPQDDSQYPGMDTKTASDYLPQTNWPTTQLPPGYTCAEPYLFPDIN 447 + D S P T A D + W G + I+ Sbjct: 1170 AAIEQARQATRIYHFHTDVSGAPQEATNEAGDIV----WAGQYSAWGKVAPNQHAPARID 1225 Query: 448 KPDGPATAGIDDLGEI 463 +P A DD E+ Sbjct: 1226 QPLRYAGQYADDSTEL 1241 Score = 50.6 bits (119), Expect = 1e-04, Method: Composition-based stats. Identities = 43/299 (14%), Positives = 74/299 (24%), Gaps = 48/299 (16%) Query: 10 DAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQH-----------------R 52 + ++R G L TD + YD+ R Sbjct: 628 GGRKTFEWNRLGELVAYTDCSGKTTRNF---------YDAFGLPLARENALGHRVTFDLR 678 Query: 53 LVHYTRTQYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQV---------T 103 R Y YD G + + + + + Sbjct: 679 PTGEARRVTYPDGSTESYEYDAAGLMIRHVGLGGRTQIALRNARGQIVEAVDPAGRRTCY 738 Query: 104 WYGWDGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLAD--TLQQSGG 161 Y +G RL +Q + + + L G + + D L G Sbjct: 739 RYDAEG-RLRELQQGHA--RYAFTYSAGGRLTSETRPDGVRRRFEYGEAGDLAALDIVGA 795 Query: 162 EDGGSVVFPPVLVQMLDRLE-SEILADRVSEESRRWLASCGLTVEQMQ---NQMDPVYTP 217 D + PV +R + A E R+ G + ++ Sbjct: 796 ADDATANDRPVRTIRFERDRMGNLCAQHTPTEVTRYTRDTGGRLLEVACVPTAAGLALGI 855 Query: 218 ARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENP-HQLQQLIRL-PGQQY 274 A + D G A G+ D N++ P Q Q++R G + Sbjct: 856 APDTLTFEYDKAGRLSAEHGANGSV--RYTLDALDNVMKLALPHEQTLQMLRYGSGHVH 912 Score = 42.9 bits (99), Expect = 0.026, Method: Composition-based stats. Identities = 58/444 (13%), Positives = 109/444 (24%), Gaps = 84/444 (18%) Query: 14 LYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYLYD 73 + D GR+ E + + RL + + + Y YD Sbjct: 369 QFERDSRGRVREIQTCGGLLAVLDYEP--------EHGRLAGVSLVSGDQRRLVVAYGYD 420 Query: 74 PLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQPGSFT- 132 G+ + V + + D T ++ + Y + Sbjct: 421 EHGQMASVTDANGAL-------------VRRFTY-ADGRMTSHSNALGFTSGYTWQAVGG 466 Query: 133 --PLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVS 190 ++ T+ GE + + V R +++ Sbjct: 467 APRVVATHTSEGEAWAFEYDIEGRR----------THVRHADGRHAQWRYDAQF------ 510 Query: 191 EESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDE 250 + +L G N G+P+ L G EYD+ Sbjct: 511 -QIVEYLDFDGRRYGLKYNDA------------------GMPVMLTLP-GERTVTFEYDD 550 Query: 251 WGNLLNEENPHQLQQLIRLPGQQY--------DEESGLYYNRHRYYDPLQGRYI-TQDPI 301 G ++ E +P R G D H YD QGR + T+DP+ Sbjct: 551 AGRIVAETDPLGRTTKTRYDGNSRRPVEIIAPDGS-----AWHAEYD-RQGRLLATRDPL 604 Query: 302 GLKGGWNFYQYPLN----PVQYIDSMGLASKYGHLNNGGYGARPNKPPTPDPSKLPDIAK 357 + N Y+YP P+ ++D++G + G A + + Sbjct: 605 DRE---NRYEYPKALSALPIAHVDALGGRKTFEWNRLGELVAYTDCSGKTTRNFYDAFGL 661 Query: 358 QLRLPYPIDQASSAP-NVFKTFFRALSPYDYTLYCRKWVKPNLTCTPQDDSQYPGMDTKT 416 L + + R P T + + Sbjct: 662 PLARENALGHRVTFDLRPTGEARRVTYPDGSTESYEYDAAGLMIRHVGLGGRTQIALRNA 721 Query: 417 ASDYLPQTNWPTTQLPPGYTCAEP 440 + + + Y Sbjct: 722 RGQIVEAVDPAGRRTCYRYDAEGR 745 >UniRef50_A4FJ21 YD repeat protein n=1 Tax=Saccharopolyspora erythraea NRRL 2338 RepID=A4FJ21_SACEN Length = 1670 Score = 203 bits (517), Expect = 1e-50, Method: Composition-based stats. Identities = 86/397 (21%), Positives = 130/397 (32%), Gaps = 31/397 (7%) Query: 6 RIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAE-- 63 RI A YD RL +T G + + Y L+ Sbjct: 1032 RIDDAATAEENYDSEHRLVSQTVTGHSGQLVLA----RSFRYRPDGELIGTDDRLSGSIR 1087 Query: 64 --------------PLVESRYLYDPLGRRV----AKRVWRRERDLTGWMSLSRKPQVTWY 105 P Y YD LG + A R G ++ Y Sbjct: 1088 YQIDRTGRVVEVISPDRRENYQYDGLGNILNAGGAPDAATGPRRYAGNRLVAAGAVQFEY 1147 Query: 106 GWDGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGG 165 G + I+ R Y S+ L+ V T G L + + + + + G Sbjct: 1148 DAQGRLVQRIEAGRG---WRYAWDSYDQLVAVTTPEGVLWRYRYDPIGRRIAKQRLAADG 1204 Query: 166 SVVFPPVLVQMLDRLESEILADRVSEES-RRWLASCGLTVEQMQNQMDPVYTPARKIHLY 224 +V V L ++ D + W Q+++ +R+ Sbjct: 1205 AVAEQVDFVWDGGTLIEQVHTDAQGRRTVTTWEHRPDDDTPVAQHEIGADG--SRRFFAI 1262 Query: 225 HCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEESGLYYNR 284 D G P L++ G W WG L + P+ + +R PGQ D E+GL YN Sbjct: 1263 VTDPVGTPTDLIAPNGVLAWHGRTSLWGKELPVQ-PNGVTTPLRFPGQYADAETGLNYNV 1321 Query: 285 HRYYDPLQGRYITQDPIGLKGGWNFYQYPLNPVQYIDSMGLASKYGHLNNGGYGARPNKP 344 HRYYDP GRY++QDP+GL N Y NP D +GLA + G G +P Sbjct: 1322 HRYYDPATGRYLSQDPLGLAPAPNPVAYVDNPHSAADPLGLAKGGTKRKHDGSGNQPPTT 1381 Query: 345 PTPDPSKLPDIAKQLRLPYPIDQASSAPNVFKTFFRA 381 + D + + ++ + A Sbjct: 1382 GNGNKRTKKDPWDRKPFSHDTEKKTQADKTSTPPGTG 1418 Score = 81.4 bits (199), Expect = 8e-14, Method: Composition-based stats. Identities = 46/248 (18%), Positives = 74/248 (29%), Gaps = 40/248 (16%) Query: 2 WPDNRIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQY 61 + NR+ + YD GRL ++ + R RY +DS +LV T + Sbjct: 1132 YAGNRLVAAGAVQFEYDAQGRLVQRIEA----------GRGWRYAWDSYDQLVAVTTPEG 1181 Query: 62 AEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRL-----TTIQ 116 V RY YDP+GRR+AK+ + + + WDG L T Q Sbjct: 1182 ----VLWRYRYDPIGRRIAKQRLAAD---------GAVAEQVDFVWDGGTLIEQVHTDAQ 1228 Query: 117 NDRTRIQTIYQPGSFTPLIR--VETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLV 174 RT ++P TP+ + + T +G + Sbjct: 1229 GRRTVTTWEHRPDDDTPVAQHEIGADGSRRFFAIVTDPVGTPTDLIAPNGVLAWHGRTSL 1288 Query: 175 QMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRG---- 230 + ++ + + DP D G Sbjct: 1289 WGKELPVQPNGVTTPLRFPGQYADAETGLNYNVHRYYDPATG-----RYLSQDPLGLAPA 1343 Query: 231 -LPLALVS 237 P+A V Sbjct: 1344 PNPVAYVD 1351 Score = 62.1 bits (149), Expect = 4e-08, Method: Composition-based stats. Identities = 45/308 (14%), Positives = 74/308 (24%), Gaps = 51/308 (16%) Query: 14 LYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYLYD 73 Y YD GRL + + R+ YDS RL + RY+YD Sbjct: 555 RYGYDDQGRL---------AAVINSSGKALRFQYDSAGRLTEWQDRNG----FWFRYIYD 601 Query: 74 PLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYG----------WDGDRLTTIQNDRTRIQ 123 GR V + D S + +T Y ++ + + D Sbjct: 602 EHGRVVRTVGDKGYFDSQFSYSDDGQRAITRYTDSLGGVKEFEFNAAKQLVREVDALGNT 661 Query: 124 TIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESE 183 T+ L+ G + + V + + Sbjct: 662 TLSTWDRHDRLLSRTDPLGRTTHYEYDAAGR------PWLITRPDGSVVELDLSTDDTVA 715 Query: 184 ILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCD-HRGLPLALVSTEGAT 242 + E + + + + D G A Sbjct: 716 SIIVTDGENTWTRVYAGEAPDPFSGKVGTAPDLDVDDLR---SDRGAGTSE----PRSAQ 768 Query: 243 EWCAEYDEWGNLLNEENPHQLQQLIRLP--GQ---QYDEESGLYYNRHRY---YDPLQGR 294 D +G E P + + G + D R YDP + Sbjct: 769 PDRPLLDLFGRPREEAAPDGSRIQLGWTVDGHRSWRVDS------LGAREQWRYDPEGNQ 822 Query: 295 YITQDPIG 302 DP+G Sbjct: 823 IARIDPMG 830 Score = 62.1 bits (149), Expect = 4e-08, Method: Composition-based stats. Identities = 39/319 (12%), Positives = 70/319 (21%), Gaps = 75/319 (23%) Query: 4 DNRIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAE 63 D R+ Y YD G+L + Y +D LV + Sbjct: 892 DGRV-----LRYVYDAAGQLVRSVN---------GAGEATDYVFDLLGNLVEWRT----- 932 Query: 64 PLVESRYLYDPLGRRVAKRVWRR-------ERDLTGWMSLSRKPQVTWYGWDGDRLTTIQ 116 P + Y Y P+G V E+ +++++ Y D +++ + Sbjct: 933 PSSVTTYTYSPVGHLVRATNDDAVLELELDEQGRITAETVNQRTVAFDYD-DTNKVVRRR 991 Query: 117 NDR-------------------TRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQ 157 Y G + R A+ S + Sbjct: 992 TPSGVDSAWACDGTSRPIALSMGGHSLRYTTGEAGRVARTRIDDAATAEENYDSEHRLVS 1051 Query: 158 QSGGEDGGSVVFPPVLVQMLDRLESEILADRVSEES----------------RRWLASCG 201 Q+ G +V D RR Sbjct: 1052 QTVTGHSGQLVLARSFRYRPDGELIGTDDRLSGSIRYQIDRTGRVVEVISPDRRENYQYD 1111 Query: 202 LTVEQMQNQMDPVYTPARKIHLYHCDHR---GLPLALVSTEGATE--------WCAEYDE 250 + P + + + G +G W +D Sbjct: 1112 GLGNILNAGGAPDAATGPRRYA--GNRLVAAGAVQFEYDAQGRLVQRIEAGRGWRYAWDS 1169 Query: 251 WGNLLNEENPHQLQQLIRL 269 + L+ P + R Sbjct: 1170 YDQLVAVTTPEGVLWRYRY 1188 Score = 56.0 bits (133), Expect = 3e-06, Method: Composition-based stats. Identities = 47/344 (13%), Positives = 72/344 (20%), Gaps = 84/344 (24%) Query: 5 NRIARDAHY-----LYRYDRHGR------------------------LTEKTDLIPEGVI 35 R+ Y YD HGR +T TD + Sbjct: 583 GRLTEWQDRNGFWFRYIYDEHGRVVRTVGDKGYFDSQFSYSDDGQRAITRYTDSLGGVKE 642 Query: 36 RTDD------------ERTHRYHYDSQHRLVHYTRTQYAEPLVESRYLYDPLGR------ 77 + T +D RL+ T + Y YD GR Sbjct: 643 FEFNAAKQLVREVDALGNTTLSTWDRHDRLLSRTDPLG----RTTHYEYDAAGRPWLITR 698 Query: 78 -------------------RVAKRVWRRERDLTGWMSLSRKPQV-TWYGWDGDRLTTIQN 117 V R G +V T D D L + + Sbjct: 699 PDGSVVELDLSTDDTVASIIVTDGENTWTRVYAGEAPDPFSGKVGTAPDLDVDDLRSDRG 758 Query: 118 DRTRIQTIYQPGS-----FTPLIRVETATGELAKTQRRSLADTLQQSGGEDGG---SVVF 169 T QP F G + + Sbjct: 759 AGTSEPRSAQPDRPLLDLFGRPREEAAPDGSRIQLGWTVDGHRSWRVDSLGAREQWRYDP 818 Query: 170 PPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQ----MQNQMDPVYTPARKIHLYH 225 + +D + A+ E+ + + ++ V P + Y Sbjct: 819 EGNQIARIDPMGGVTAAEYGPFETELACVDENGARTERTFDTERRLTSVTNPQGQTWRYV 878 Query: 226 CDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRL 269 D G + +G YD G L+ N Sbjct: 879 RDLAGRVVEETDFDGRVL-RYVYDAAGQLVRSVNGAGEATDYVF 921 Score = 47.9 bits (112), Expect = 9e-04, Method: Composition-based stats. Identities = 27/209 (12%), Positives = 52/209 (24%), Gaps = 16/209 (7%) Query: 48 DSQHRLVHYTRTQYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVT--WY 105 D R + ++ P V G RV R + + V Y Sbjct: 501 DDDGRRIDIEHHRFGPPKVIRH----SDGYRVEIDSARERVTGIRVVDPRQGADVPVMRY 556 Query: 106 GWDGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGED-- 163 G+D + + +Q S L + G + ++ G + Sbjct: 557 GYDDQGRLAAVINSSGKALRFQYDSAGRLTEWQDRNGFWFRYIYDEHGRVVRTVGDKGYF 616 Query: 164 GGSVVFPPVLVQMLDRL------ESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTP 217 + + + R E + + R A T+ + Sbjct: 617 DSQFSYSDDGQRAITRYTDSLGGVKEFEFNAAKQLVREVDALGNTTLSTWDRHDRLLSRT 676 Query: 218 A--RKIHLYHCDHRGLPLALVSTEGATEW 244 + Y D G P + +G+ Sbjct: 677 DPLGRTTHYEYDAAGRPWLITRPDGSVVE 705 Score = 44.4 bits (103), Expect = 0.009, Method: Composition-based stats. Identities = 21/155 (13%), Positives = 38/155 (24%), Gaps = 13/155 (8%) Query: 27 TDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYLY--------DPLGRR 78 T ++ YD + R + + Y D G R Sbjct: 796 TVDGHRSWRVDSLGAREQWRYDPEGN--QIARIDPMGGVTAAEYGPFETELACVDENGAR 853 Query: 79 VAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQPGSFTPLIRVE 138 + R + + + Q Y D + D Y + L+R Sbjct: 854 TERTFDTERRLTSVT---NPQGQTWRYVRDLAGRVVEETDFDGRVLRYVYDAAGQLVRSV 910 Query: 139 TATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVL 173 GE L + ++ + + PV Sbjct: 911 NGAGEATDYVFDLLGNLVEWRTPSSVTTYTYSPVG 945 >UniRef50_C1M4X0 Predicted protein n=1 Tax=Citrobacter sp. 30_2 RepID=C1M4X0_9ENTR Length = 1494 Score = 203 bits (515), Expect = 2e-50, Method: Composition-based stats. Identities = 88/449 (19%), Positives = 138/449 (30%), Gaps = 46/449 (10%) Query: 5 NRIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEP 64 N + + ++YD L +T + D R YHYD R+ + + Sbjct: 1047 NGMRPVEAWHWQYDSRHNLLSETQIS--------DYRYQGYHYDDGDRVCRHDTSFRG-- 1096 Query: 65 LVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQT 124 + + YD G + + + LT Y G R+ + Sbjct: 1097 --VTHHTYDAAGNLL--TAPQAGQSLTHNRQTQCGNGACRYDVYG-RMVQKPGPGGMWRY 1151 Query: 125 IYQPGSF-------TPLIRVETATGELAKTQRRSLADTLQQSG-----GEDGGSVVFPPV 172 Y TP T ++ D G V Sbjct: 1152 GYDSEHRMTEAVLDTPDATGAGNTRHRVIFTYDPFGRRTEKRSEVTVSAPDDGRVTGAQE 1211 Query: 173 LVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLP 232 + + + R + G + +++ Y C H G+P Sbjct: 1212 VTTFVWEGFRLLAETRNGQSLVYVYEGAGSYTPLARVYGTG---DKQRVDYYRCSHNGMP 1268 Query: 233 LALVSTEGATEWCAEYDEWGNLLNEEN-----------PHQLQQLIRLPGQQYDEESGLY 281 AL +G W + + WG +E ++ +R GQ D E+GL+ Sbjct: 1269 QALTDEDGKLHWRQDVETWGETRSEYADEEGGRWRKIWGGAPEENLRFAGQYLDRETGLH 1328 Query: 282 YNRHRYYDPLQGRYITQDPIGLKGGWNFYQYPLNPVQYIDSMGL--ASKYGHLNNGGYGA 339 YN RYY P GR+IT DPIGL GG N Y Y NP+ +ID +GL G+ Sbjct: 1329 YNTFRYYAPDMGRFITPDPIGLAGGINLYSYAPNPLSWIDPLGLLKCGLTGNEVGDASNL 1388 Query: 340 RPNKPPTPDPSKLPDIAKQLRLPYPIDQASSAPNVFKTFFRALSPY-DYTLYCRKWVKPN 398 KP T + D + P + + K A +Y Y N Sbjct: 1389 PVIKPGTKEWKLAVDTMRNNGSGKPNFRVADRNAAEKLLKDANPKIPEYGQYTGSKNYRN 1448 Query: 399 LTCTPQDDSQYPGMDTKTASDYLPQTNWP 427 ++ + + LP W Sbjct: 1449 KAGYEHHPNESHTANAPENN--LPHVKWS 1475 Score = 72.1 bits (175), Expect = 4e-11, Method: Composition-based stats. Identities = 49/295 (16%), Positives = 88/295 (29%), Gaps = 47/295 (15%) Query: 15 YRYDRHGRLTEKTDLIPEG------------VIRTDDERTHRYHYDSQHRLVHYTRTQYA 62 YR D G++ E TD ++ +T +Y YD+ +RL + Sbjct: 707 YRRDEWGQVVEFTDEKGGVQRFSCNERGQLISVQDCSGKTTQYRYDAAYRLAE----EVD 762 Query: 63 EPLVESRYLYDPLGRR---------VAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLT 113 +RY+Y P GR A W + + P Y G Sbjct: 763 AAGESTRYVYSPAGRLKTVSGAEDWTASLSWTAQGLPESYRVGHNNPVRWQYDACGR--V 820 Query: 114 TIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPV- 172 ++ D + + L R+ +GEL + ++ G + + V Sbjct: 821 SVVTDPLGHTVRREYDARNRLTRLYNESGELYRFIHGINGHLTEERGLDGIITRYEYDVC 880 Query: 173 ----------------LVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYT 216 + E+ + + + + G T++ + Sbjct: 881 DRVVSKTWAAGTPDALTHRWQYNAAGEVTDKQTPDGHTVYRYTTGGTLQAALFYPPGAES 940 Query: 217 PARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRLPG 271 PA+++ L H D G A + G DE GN + + P G Sbjct: 941 PAQRVLLEH-DRLGRLTAEENDSGRV--SYSLDELGNRTSVQLPDGRSLKTLYYG 992 Score = 66.4 bits (160), Expect = 2e-09, Method: Composition-based stats. Identities = 66/337 (19%), Positives = 92/337 (27%), Gaps = 57/337 (16%) Query: 16 RYDRHGRLTEKTDLIPE------------GVIRTDDERTHRYHYDSQHRLVHYTRTQYAE 63 YD RLT + E R D RY YD R+V T Sbjct: 834 EYDARNRLTRLYNESGELYRFIHGINGHLTEERGLDGIITRYEYDVCDRVVSKTWAAGTP 893 Query: 64 PLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTW--------------YGWDG 109 + R+ Y+ G K+ + + + + + G Sbjct: 894 DALTHRWQYNAAGEVTDKQTPDGHTVYRYTTGGTLQAALFYPPGAESPAQRVLLEHDRLG 953 Query: 110 DRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDG----G 165 RLT +ND R+ Y V+ G KT L S E Sbjct: 954 -RLTAEENDSGRVS--YSLDELGNRTSVQLPDGRSLKTLYYGSGHALSISLDERLITEFT 1010 Query: 166 SVVFPPVLVQMLDRLESEILADRVSEESRRWLA---SCGLTVEQMQNQMDP-----VYTP 217 + + L + DR+ ++RR + + VE Q D T Sbjct: 1011 RDNLHREISRTQGGLTTRTRYDRLGRQARRDIYRKENGMRPVEAWHWQYDSRHNLLSETQ 1070 Query: 218 ARKIHL--YHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQYD 275 YH D G + T YD GNLL Q R Sbjct: 1071 ISDYRYQGYHYD-DGDRVCRHDTSFRGVTHHTYDAAGNLLTAPQAGQSLTHNRQT----- 1124 Query: 276 EESGLYYNRHRYYDPLQGRYITQDPIGLKGGWNFYQY 312 N YD + GR + + GG Y Y Sbjct: 1125 ----QCGNGACRYD-VYGRMVQK---PGPGGMWRYGY 1153 Score = 50.2 bits (118), Expect = 2e-04, Method: Composition-based stats. Identities = 34/274 (12%), Positives = 62/274 (22%), Gaps = 36/274 (13%) Query: 14 LYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYLYD 73 Y Y G L TD + R Y D+ RY + Sbjct: 512 SYDYTPQGELCRVTDADDVCL------REFDYTPDAL------MAGHRMPGGARHRYQWK 559 Query: 74 PLG---RRVAKRVWRRERDLTGWMSL-------SRKPQVTWYGWDGDRLTTIQNDRTRIQ 123 R VA + G+ + + WD L D + Sbjct: 560 KFSDGWRVVAYESSGGDSATIGYDLTQGVTTVTHGGGETHRHEWDHRYLVEKYTDESGQV 619 Query: 124 TIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESE 183 Y L R G + + + ++ + DR Sbjct: 620 WGYDWNEDGQLSRTVDPLGASRAYHYDNAGNMILETDPLGRA-----VCTRWLEDRALPV 674 Query: 184 ILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATE 243 ++ + + + ++ Y D G + +G Sbjct: 675 QVSGPEGSVHQYFYDANFGLRAEINALGLCC--------YYRRDEWGQVVEFTDEKGG-V 725 Query: 244 WCAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEE 277 +E G L++ ++ R E Sbjct: 726 QRFSCNERGQLISVQDCSGKTTQYRYDAAYRLAE 759 Score = 41.3 bits (95), Expect = 0.078, Method: Composition-based stats. Identities = 38/211 (18%), Positives = 56/211 (26%), Gaps = 13/211 (6%) Query: 44 RYHYDSQHRLVHYTRTQYAEPLVESRYLYDPLG--RRVAKRVWRRERDLTGWMSLSRKPQ 101 R HYD Q RL T TQ + V Y D R G + R Sbjct: 454 RLHYDEQDRLQAITDTQESLR-VVLHYQ-DLHSPQRPTRITEHMLTPAPPGGEPVHRLLM 511 Query: 102 VTWYGWDGDRLTTIQNDRTRIQ-TIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSG 160 Y G+ D ++ Y P + R+ + ++ S + Sbjct: 512 SYDYTPQGELCRVTDADDVCLREFDYTPDALMAGHRMPGGARHRYQWKKFSDGWRVVAYE 571 Query: 161 GEDGGSVVFPPVLVQMLDRLESEILADRVSEESRRWL-----ASCGLTVEQMQNQMDPVY 215 G S L Q + + E R+L G N+ + Sbjct: 572 SSGGDSATIGYDLTQGVTTVTHGGGETHRHEWDHRYLVEKYTDESGQVWGYDWNEDGQLS 631 Query: 216 T---PARKIHLYHCDHRGLPLALVSTEGATE 243 P YH D+ G + G Sbjct: 632 RTVDPLGASRAYHYDNAGNMILETDPLGRAV 662 >UniRef50_A6G340 Putative uncharacterized protein n=2 Tax=Plesiocystis pacifica SIR-1 RepID=A6G340_9DELT Length = 2523 Score = 202 bits (514), Expect = 2e-50, Method: Composition-based stats. Identities = 82/506 (16%), Positives = 140/506 (27%), Gaps = 91/506 (17%) Query: 9 RDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERT--HRYHYDSQHRLVHYTRTQYAEPL- 65 R Y YD G +T+ D + V + + Y YD+ RL+ T ++A Sbjct: 1801 RLQSLHYHYDPAGNITDIRDTAQQTVFFQNTVVEAANSYTYDAVGRLIEATGREHASQGT 1860 Query: 66 ------------------------VESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQ 101 RY YD G + + + Sbjct: 1861 AQRTHAQLPVGPQPMTSDPSAMRRYTQRYTYDAAGNILKLQHIPSSGTGW--------TR 1912 Query: 102 VTWYGWDGDRLTTIQN-------DRTRIQTIYQPGS--------------FTPLIRVETA 140 Y DG+RL + Y + + PL +++ A Sbjct: 1913 HYAYATDGNRLLSTSAPGDLPNPGGGPYSHSYTYDAHGSMVTMPHLPAMTWNPLDQLQHA 1972 Query: 141 TGELAKTQRRSLA-----DTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSEESRR 195 T + + + G ++ R+ ++ +R + Sbjct: 1973 TAGTQEVYFQYAGGSNRSRKFTEHAGGTTEERIYLGPFELYRKRINGQLDLERETLHVSD 2032 Query: 196 WLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLL 255 + + + PV +P +H G V+ GA EY +G Sbjct: 2033 GTGRICMVETKTADAGTPVPSPTPMWRFQLSNHLGSTATEVTETGAVISHEEYHPYGTSA 2092 Query: 256 NEENPHQLQ---QLIRLPGQQYDEESGLYYNRHRYYDPLQGRYITQDPIGLKGGWNFYQY 312 + + R G + DEE+GL Y+ RYY P GR+ DP GL GG + Y Y Sbjct: 2093 YRSVDSSIDVSARRYRHTGMERDEETGLGYHTARYYAPWLGRWTAADPSGLSGGIDRYCY 2152 Query: 313 -PLNPVQYIDSMGLASKYGHLNNGGYGARPNKPPTPDPSKLPDIAKQLRLPYPIDQASSA 371 NP + D G A + P + Sbjct: 2153 AAGNPARNTDQNGKHPPDESETLDSQWAASSAPT--------------------EGPGFT 2192 Query: 372 PNVFKTFFRALSP-YDYTLYCRKWVKP-----NLTCTPQDDSQYPGMDTKTASDYLPQTN 425 + Y +++ P + + +T + T Sbjct: 2193 ETYLGQSIHVSTEAYTGSVWVAADENPQEVIAQKVASEEARLSSAAEPERTPAPAHTATP 2252 Query: 426 WPTTQLPPGYTCAEPYLFPDINKPDG 451 +T P A P + P + +G Sbjct: 2253 ATSTPAQPAQLYALPPVVPKYQRSEG 2278 Score = 67.9 bits (164), Expect = 7e-10, Method: Composition-based stats. Identities = 36/245 (14%), Positives = 62/245 (25%), Gaps = 27/245 (11%) Query: 9 RDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVES 68 + Y YD G L + T + YD++ + + A P + Sbjct: 1720 DGSRTRYAYDEGGGLRQVT--LEPRGATPAQTVVGDMSYDAKGQRLQVVYGPAASPTSTT 1777 Query: 69 RYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQ----- 123 Y YDP + +R R T S S + Q Y +D T D + Sbjct: 1778 DYTYDP-------QTYRLTRLKTTRGSDSERLQSLHYHYDPAGNITDIRDTAQQTVFFQN 1830 Query: 124 ------TIYQPGSFTPLIRVETATGELAKTQRRSLADT-------LQQSGGEDGGSVVFP 170 Y + LI T +R+ A + + Sbjct: 1831 TVVEAANSYTYDAVGRLIEATGREHASQGTAQRTHAQLPVGPQPMTSDPSAMRRYTQRYT 1890 Query: 171 PVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRG 230 + +L+ + + + P H Y D G Sbjct: 1891 YDAAGNILKLQHIPSSGTGWTRHYAYATDGNRLLSTSAPGDLPNPGGGPYSHSYTYDAHG 1950 Query: 231 LPLAL 235 + + Sbjct: 1951 SMVTM 1955 >UniRef50_UPI0001B53B37 YD repeat protein n=1 Tax=Streptomyces sp. AA4 RepID=UPI0001B53B37 Length = 1465 Score = 202 bits (513), Expect = 3e-50, Method: Composition-based stats. Identities = 76/353 (21%), Positives = 112/353 (31%), Gaps = 34/353 (9%) Query: 10 DAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESR 69 H +++ G ++ D + R+ D R T Sbjct: 1046 TQHRAFQFRADGVVSAIEDQLTGA---------RRFDLDPLGRATRVT-----GAGWHES 1091 Query: 70 YLYDPLGRRVAKRVWR--------RERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTR 121 Y YD G R G + P Y G + + +R Sbjct: 1092 YQYDASGNVRHAEHGHPHAASALSGPRGYAGTLLREAGPVSYQYDAQGRVVLAHKKRLSR 1151 Query: 122 IQ--TIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDR 179 Y L+ + T G + + + GSV + Sbjct: 1152 PPAVWRYSWDPDDQLVELATPDGVRWRYLYDPFGRRIAKLRLAADGSVAGRVDFLWDGHV 1211 Query: 180 LESEILADRVSEESRRWLASCGLTVEQMQNQ-----MDPVYTPARKIHLYHCDHRGLPLA 234 L ++ A RV+ W Q + P + + D G Sbjct: 1212 LAEQVAAGRVT----TWDWDSAEFRPLAQRERTIAADRPQDRVDEEFYAIVTDFAGAATE 1267 Query: 235 LVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEESGLYYNRHRYYDPLQGR 294 L+ G W A+ WG + +R PGQ +DEESGLYYN RYYDP GR Sbjct: 1268 LIDPGGNVAWHADRTLWGYRAGAS-QGGVSVPMRFPGQYHDEESGLYYNYFRYYDPETGR 1326 Query: 295 YITQDPIGLKGGWNFYQYPLNPVQYIDSMGLASKYGHLNNGGYGARPNKPPTP 347 Y + DP+GL GG N + Y NP ++D GL++ + G R P Sbjct: 1327 YASPDPLGLHGGDNPHAYVANPTSWLDPFGLSANQRRWIDHSDGWRLGIDRFP 1379 Score = 82.5 bits (202), Expect = 3e-14, Method: Composition-based stats. Identities = 78/471 (16%), Positives = 135/471 (28%), Gaps = 76/471 (16%) Query: 13 YLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYLY 72 + YD GRL E + + + + YD R+ + Y Y Sbjct: 514 VSFDYDEAGRLREVVNSSRKP---------YAFAYDHAGRVTKWVDRNG----EWYSYEY 560 Query: 73 DPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQPGSFT 132 D GR VA S Y D +RLT + + R+ + Sbjct: 561 DHRGRCVA-----------TDGSGGAVSGTLEYD-DENRLTVETDSQGRVT-RHCFNERR 607 Query: 133 PLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSEE 192 LIR G + Q D L + G + + DR + Sbjct: 608 QLIRQVDPLGNETR-QVWDGYDRLAATVDPLGRTTAYGYD-----DRGNLVTATRPDGSQ 661 Query: 193 SRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWG 252 + L V ++ P + Y D RG P+AL GA + G Sbjct: 662 TLVTYGEFDLPVVRID--------PDGGVWRYAYDERGNPVALTDPAGAVVSYGRNER-G 712 Query: 253 NLLNEENPHQLQQLIR-----LPGQQYDEESGLYYNRHRYYDPLQGRYITQDPIGLKGGW 307 +L + + + IR LP + D G+ +DP G Sbjct: 713 HLTSVTDALGNVRRIRADAAGLPVEITDPLGGVTRCV-------------RDPFGR---- 755 Query: 308 NFYQYPLNPVQYIDSMGLASKYGHLNNGGYGARPNKPPTPDPSKLPDIAKQLRLPYPIDQ 367 P + D +G ++ G +R + + ++ + Q Sbjct: 756 --------PSEISDPLGQVRRFRWTVEGRLSSRTMPDGSVERWIRDAEGNEVAYVDALGQ 807 Query: 368 AS-SAPNVFKTFFRALSPYDYTLYCRKWVKPNLTCTPQDDSQYPGMDTKTASDYLPQTNW 426 + + F L P R + L T + A + + ++ Sbjct: 808 TTKTWLTHFDLPAAQLEPDGGRYEFRYDTEMRLLSTTNPQGLVWSYEYNEAGKLIREIDY 867 Query: 427 PTTQLPPGYTCAEPYLFPDINKPDGPATAGIDDLGEILAKMKQRTSRGIRK 477 ++ Y A L N D LG ++ ++R + G+ + Sbjct: 868 NGREVRYAYDAAG-QLTSQTNGAGETVEFRYDLLGNVV---ERRHAGGVSR 914 Score = 68.3 bits (165), Expect = 7e-10, Method: Composition-based stats. Identities = 41/279 (14%), Positives = 67/279 (24%), Gaps = 38/279 (13%) Query: 10 DAHYLYRYDRHGRLTEKTDLIPEGVIRT------------DDERTHRYHYDSQHRLVHYT 57 Y YD G L T + T D RY YD + V T Sbjct: 638 GRTTAYGYDDRGNLVTATRPDGSQTLVTYGEFDLPVVRIDPDGGVWRYAYDERGNPVALT 697 Query: 58 RTQYA-------EPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGD 110 A E + D LG R R + VT D Sbjct: 698 DPAGAVVSYGRNERGHLTSVT-DALGNV---RRIRADAAGLPVEITDPLGGVTRCVRDPF 753 Query: 111 RLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFP 170 + +D ++ L G + + R + + + + + Sbjct: 754 GRPSEISDPLGQVRRFRWTVEGRLSSRTMPDGSVERWIRDAEGNEVAYVDALGQTTKTWL 813 Query: 171 PVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRG 230 +LE + ++ L S + + Y + G Sbjct: 814 THFDLPAAQLEPDGGRYEFRYDTEMRLLSTTNPQGLVWS--------------YEYNEAG 859 Query: 231 LPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRL 269 + + G YD G L ++ N R Sbjct: 860 KLIREIDYNGREV-RYAYDAAGQLTSQTNGAGETVEFRY 897 Score = 66.4 bits (160), Expect = 2e-09, Method: Composition-based stats. Identities = 42/279 (15%), Positives = 69/279 (24%), Gaps = 40/279 (14%) Query: 9 RDAHYLYRYDRHGRLTEKTDLIPEGVIRTDD-----------ERTHRYHYDSQHRLVHYT 57 Y YD G+LT +T+ E V D R+ Y++ ++V Sbjct: 868 NGREVRYAYDAAGQLTSQTNGAGETVEFRYDLLGNVVERRHAGGVSRFEYNAARQVVRAA 927 Query: 58 RTQYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQN 117 L DPLGR +A+ R Y G R+ + Sbjct: 928 NEASEVVLQR-----DPLGRVLAETGNGRTVSS-------------RYDAAGRRIARRTH 969 Query: 118 DRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQML 177 Y +R T + A L + + G + L Sbjct: 970 AGAESWWGYDAAGRPTSLR----TAARTMSFSYDPAGHLVEWLLDSGAMLAQSWDSNDRL 1025 Query: 178 DRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVS 237 +A R + + + + D G + Sbjct: 1026 VAQTVSTVAGRAGAAGSARRTQHRAFQFRADGVVSAIEDQLTGARRFDLDPLGRATRVTG 1085 Query: 238 TEGATEWCAEYDEWGNLLNEENP-----HQLQQLIRLPG 271 +YD GN+ + E+ L G Sbjct: 1086 AG--WHESYQYDASGNVRHAEHGHPHAASALSGPRGYAG 1122 Score = 60.6 bits (145), Expect = 1e-07, Method: Composition-based stats. Identities = 40/259 (15%), Positives = 70/259 (27%), Gaps = 38/259 (14%) Query: 18 DRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYLYDPLGR 77 D GR +E +D + + R+ + + RL T + R++ D G Sbjct: 751 DPFGRPSEISDPL---------GQVRRFRWTVEGRLSSRTMPDGS----VERWIRDAEGN 797 Query: 78 RVAKRVWRRERDLT-------GWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQPGS 130 VA + T L + +D + + + Y+ Sbjct: 798 EVAYVDALGQTTKTWLTHFDLPAAQLEPDGGRYEFRYDTEMRLLSTTNPQGLVWSYEYNE 857 Query: 131 FTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVS 190 LIR G + + Q+ G V+ L ++ R + Sbjct: 858 AGKLIREIDYNGREVRYAYDAAGQLTSQTNGA--------GETVEFRYDLLGNVVERRHA 909 Query: 191 EESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDE 250 R+ + V + N+ V D G LA G T YD Sbjct: 910 GGVSRFEYNAARQVVRAANEASEVV--------LQRDPLGRVLAET-GNGRTVSS-RYDA 959 Query: 251 WGNLLNEENPHQLQQLIRL 269 G + + Sbjct: 960 AGRRIARRTHAGAESWWGY 978 Score = 52.5 bits (124), Expect = 3e-05, Method: Composition-based stats. Identities = 31/216 (14%), Positives = 61/216 (28%), Gaps = 23/216 (10%) Query: 6 RIARDAHYLYRYDRHGRLTE--KTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAE 63 R A Y D G+ T+ T D + + YD++ RL+ T Q Sbjct: 792 RDAEGNEVAYV-DALGQTTKTWLTHFDLPAAQLEPDGGRYEFRYDTEMRLLSTTNPQG-- 848 Query: 64 PLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQ 123 + Y Y+ G+ + + + + + Y G + ++ Sbjct: 849 --LVWSYEYNEAGKLIRE------------IDYNGREVRYAYDAAGQLTSQTNGAGETVE 894 Query: 124 TIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESE 183 Y VE + A + ++ E V+ L ++L + Sbjct: 895 FRYDLLGNV----VERRHAGGVSRFEYNAARQVVRAANEASEVVLQRDPLGRVLAETGNG 950 Query: 184 ILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPAR 219 + + R +A + D P Sbjct: 951 RTVSSRYDAAGRRIARRTHAGAESWWGYDAAGRPTS 986 >UniRef50_Q3JM84 TccC4 n=5 Tax=Burkholderia pseudomallei RepID=Q3JM84_BURP1 Length = 952 Score = 201 bits (512), Expect = 3e-50, Method: Composition-based stats. Identities = 59/365 (16%), Positives = 106/365 (29%), Gaps = 47/365 (12%) Query: 8 ARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERT--HRYHYDSQHRLVHYTRTQYAEPL 65 Y YD G + + + + + + Y YDS ++L+ + + A+ Sbjct: 317 RVLLDLRYTYDPVGNVLSERNEAQPVLFWRNQRVEPENTYRYDSLYQLIEASGRELAQRG 376 Query: 66 VE----------------------SRYLYDPLGRR--VAKRVWRRERDLTGWMSLSRKPQ 101 + Y YD G + T +++SR+ Sbjct: 377 QQGSALPRPVTPLPAHLGVYSNYRRTYRYDHAGNLVQIRHSDPATNNSYTTDITVSRRSN 436 Query: 102 V--------------TWYGWDGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKT 147 T + G +L + + P+ R E Sbjct: 437 RAVLAQEGLLPEAVDTCFDAGGHQLVLLPGQALTWNGRGELEQVVPVSREGGDDREWYSY 496 Query: 148 QRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQM 207 + G + V + L+ + A ++ G ++ Sbjct: 497 GGDGMRVQKVNERKASGSTRQQRVVYLPELEVHRTLNGASLCEALQVLTVSQSGQVQARL 556 Query: 208 --QNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLL---NEENPHQ 262 P + + + G + + G EY +G Sbjct: 557 LHWETGRPAGLDNDGVRYSYGNQLGSSMLELDDAGELISQEEYYPYGGTSIWCARSQMEA 616 Query: 263 LQQLIRLPGQQYDEESGLYYNRHRYYDPLQGRYITQDPIGLKGGWNFYQYP-LNPVQYID 321 + IR G++ D +GLYY RYY P GR+++ DP G G N + NP+ Y D Sbjct: 617 DYKAIRYSGKERDA-TGLYYYGFRYYQPWVGRWLSADPAGPVDGLNLFCMVGNNPITYTD 675 Query: 322 SMGLA 326 G A Sbjct: 676 MEGNA 680 >UniRef50_Q2T5B9 YD repeat protein n=39 Tax=Proteobacteria RepID=Q2T5B9_BURTA Length = 1553 Score = 201 bits (511), Expect = 4e-50, Method: Composition-based stats. Identities = 87/434 (20%), Positives = 147/434 (33%), Gaps = 52/434 (11%) Query: 13 YLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYLY 72 Y +D G + + R+ YD++ ++V + RY Y Sbjct: 1059 RHYEWDVAGHCVGMQEERKGLPVEAG-----RWRYDARGQMVDAYHERTESRSARERYRY 1113 Query: 73 DPLGRRVAKRVWRR---ERDLTGWMSLSRKPQVTWYGWDGDRL--TTIQNDRTRIQTIYQ 127 D LG V +++ D G +S P V Y G + T +++ Y+ Sbjct: 1114 DALGHVVEQQIDGGEIRTHDYLGDQLISAGPNVYKYDARGRMVARTELRDGFRPRSWRYR 1173 Query: 128 PGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVV-----FPPVLVQMLDRLES 182 F L V T GE + + + + G + +M++ + Sbjct: 1174 WDDFDRLREVTTPGGERWAYRYDAFGRRISKVCTHGGRRNRLKRAAYLWCGSRMIEAWRT 1233 Query: 183 EILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKI---HLYHCDHRGLPLALVSTE 239 D + +RW + Q ++ P + + CD G P L S++ Sbjct: 1234 YDERDGSRHDIQRWHYRPSTHIPLAQERLRFDDQPDPQTSEWYPLACDPNGAPHTLYSSD 1293 Query: 240 GATEWCAEYDEWGNLLNEENPHQLQ---------------------QLIRLPGQQYDEES 278 G W A WG+ ++ L+ +R PGQ DEES Sbjct: 1294 GRALWRARRTAWGDTAGDDGRDSLRSAVREQLRLGHRDSDEFDPPDCELRFPGQWADEES 1353 Query: 279 GLYYNRHRYYDPLQGRYITQDPIGLKGGWNFYQYPLNPVQYIDSMGLASKYGHLNNGGYG 338 GL+YN HRYYDP G+Y++ DP+GL GG + Y +P+Q+ D GL N+ Sbjct: 1354 GLHYNLHRYYDPSTGQYLSADPVGLAGGLRTHAYVHDPMQWGDPFGLQGYDTVRNH---- 1409 Query: 339 ARPNKPPTPDPSKLPDIAKQLRLPYPIDQASSAPNVFKTFFRALSPYDYTLYCRKWVKPN 398 ++ ++ +P + P +W N Sbjct: 1410 -------RAGNKQIDYDGQRWNVPKGKNPTEVIPES--DPIGKKLQDATDNAAARWNTSN 1460 Query: 399 LTCTPQDDSQYPGM 412 LT + + Sbjct: 1461 LTPAESNAIESARA 1474 Score = 74.1 bits (180), Expect = 1e-11, Method: Composition-based stats. Identities = 51/300 (17%), Positives = 84/300 (28%), Gaps = 47/300 (15%) Query: 2 WPDNRIARDAHY-LYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQ 60 W R YRYD GR + D+ R RY ++ +L+ T Sbjct: 608 WLSARTDPIGRVSQYRYDARGRPVKVIDVY---------GRESRYRWNGAGQLIERTDPF 658 Query: 61 YA---------------EPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSR------- 98 A P E+R+ YDP G V++ R Sbjct: 659 GALRWHFSAEGNLVAFEGPSGETRFRYDPRGLLVSRTDPDGATYAWRHDEAGRPDRWTDP 718 Query: 99 KPQVTWYGWD--GDRLTTIQNDRTRIQTIYQPGSFTP---LIRVETATGELAKTQRRSLA 153 + T D G + R Y+PG P L V G +A+ S Sbjct: 719 LGRHTHLDRDRYGRLRSRTDAAGHRTVYGYEPGPSNPREALSSVTYPDGAIARFHYDSEG 778 Query: 154 DTLQQSGGEDGGSVVFPPVLVQML------DRLESEILADRVSEESRRWLASCGLTVEQM 207 L+++ G + + +L ++ D + + A + Sbjct: 779 M-LREAVNPLGHGIRYTWGAFDLLASVTDPSGAVTQYHRDGTARLTGVTNALGQRWTLER 837 Query: 208 QNQMDPVYTPARKIHL--YHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQ 265 + + Y + G +G EYD + L++ P Q Sbjct: 838 DAAGQVIAETDWRGRCTRYVRNRLGQVTEKHLPDG-VVLRYEYDAYDRLISLAGPLQKHT 896 Score = 61.7 bits (148), Expect = 5e-08, Method: Composition-based stats. Identities = 40/265 (15%), Positives = 69/265 (26%), Gaps = 40/265 (15%) Query: 10 DAHYLYRYDRHGRLTEKTDLIPEGVIR-----------------TDDERTHRYHYDSQHR 52 H DR+GRL +TD + D R+HYDS+ Sbjct: 720 GRHTHLDRDRYGRLRSRTDAAGHRTVYGYEPGPSNPREALSSVTYPDGAIARFHYDSEGM 779 Query: 53 LVHYTRTQYAEPLVESRYLY----------DPLGRRVAKRVWRRERDLTGWMSLSRKPQV 102 L RY + DP G A + R+ + Q Sbjct: 780 LREAVNPLGHG----IRYTWGAFDLLASVTDPSG---AVTQYHRDGTARLTGVTNALGQR 832 Query: 103 TWYGWDGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGE 162 D + D T Y + G + + + + + +G Sbjct: 833 WTLERDAAGQVIAETDWRGRCTRYVRNRLGQVTEKHLPDGVVLRYEYDAYDRLISLAGPL 892 Query: 163 DGGSVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIH 222 + + ++ W A + +E + + + Sbjct: 893 QKHTFAWGSRGQLTRAQVWERSDDADA------WRADNDVCLEYDDAFRLIEESQSGQAI 946 Query: 223 LYHCDHRGLPLALVSTEGATEWCAE 247 Y D G P +L + G T W + Sbjct: 947 RYEYDVMGRPASLGTPSGQTRWQYD 971 Score = 61.0 bits (146), Expect = 9e-08, Method: Composition-based stats. Identities = 69/452 (15%), Positives = 117/452 (25%), Gaps = 68/452 (15%) Query: 18 DRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYLYDPLGR 77 D RLT D + T + Y++ RL + V D G Sbjct: 433 DDVARLTRIEDR---------NGNTIDFEYNALGRLCTVRHSGGMTLWVTC----DSRGL 479 Query: 78 RVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQND-RTRIQTIYQPGSFTPLIR 136 + + ++ Y +DG RLT + + + Y + R Sbjct: 480 LQSVSE-----------RPGGEGELVRYRFDGKRLTDVHSRFQGEFHFGYTDEGWLNHWR 528 Query: 137 VETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSEESRRW 196 AT + R+ + + + + R + R Sbjct: 529 DSGATEVALRYDERARVIATRTNTALYDDRFEYDDEQRRTTYIDALGHRHQRWFDAQNRL 588 Query: 197 LASCGLTVEQMQNQMDPVY------TPARKIHLYHCDHRGLPLALVS-----------TE 239 + S M D P ++ Y D RG P+ ++ Sbjct: 589 IRSQDPLGRVMHASFDERGWLSARTDPIGRVSQYRYDARGRPVKVIDVYGRESRYRWNGA 648 Query: 240 GATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEESGLYYNRHRYYDPLQGRYITQ- 298 G D +G L + P + R R YDP G +++ Sbjct: 649 GQLIER--TDPFGALRWHFSAEGNLVAFEGPSGE---------TRFR-YDPR-GLLVSRT 695 Query: 299 DPIGLKGGWNFYQYPLNPVQYIDSMGLASKYGHLNNG-------GYGARPNKPPTPDPSK 351 DP G W + P ++ D +G + G G R P PS Sbjct: 696 DPDGATYAW-RHDEAGRPDRWTDPLGRHTHLDRDRYGRLRSRTDAAGHRTVYGYEPGPSN 754 Query: 352 LPDIAKQLRLPYPIDQASSAP--NVFKTFFRALSPYDYTLYCRKWVKPNLTCTPQDDSQY 409 + + P + + L + + ++T +QY Sbjct: 755 PREALSSVTYPDGAIARFHYDSEGMLREAVNPLGHGIRYTWGAFDLLASVTDPSGAVTQY 814 Query: 410 P--GMDTKTASDYLPQTNWPTTQLPPGYTCAE 439 G T W + G AE Sbjct: 815 HRDGTARLTGVTNALGQRWTLERDAAGQVIAE 846 >UniRef50_C4DNE5 Rhs family protein n=1 Tax=Stackebrandtia nassauensis DSM 44728 RepID=C4DNE5_9ACTO Length = 2442 Score = 201 bits (510), Expect = 5e-50, Method: Composition-based stats. Identities = 68/387 (17%), Positives = 109/387 (28%), Gaps = 46/387 (11%) Query: 10 DAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERT--HRYHYDSQHRLVHYTRTQYAEPL-- 65 Y YD G LT TD + V + + Y YDS RL+ ++ L Sbjct: 1703 VQDLSYVYDPSGNLTRITDRTKQAVFFRNQRVEAGNSYTYDSTGRLIEAHGREHLGQLPT 1762 Query: 66 ---------------------VESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVT- 103 RY YD +G ++ R + GW + + Sbjct: 1763 GQDDERRLGLPHPNDGKAMARYVERYDYDAVGNLLSVRHRGSDPRHGGWTRRYHYAEASL 1822 Query: 104 ----------------WYGWDGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKT 147 + +D T + + ++ + Sbjct: 1823 IDPADIGNRLTDVGDASFAYDAHGNVTAMPELPVMAWNFKDQLSHSSRQSVDDGDAETTY 1882 Query: 148 QRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQM 207 + E GG + V + + + D E + V + Sbjct: 1883 YVYDNTGERMRKVTEHGGQLRSERVYLGGFEITRTYTGGDLDVERQSFHVMDDKKRVAIV 1942 Query: 208 QNQMDPVYTPARK-IHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQL 266 ++ A DH G + + EY +G + + Sbjct: 1943 DRRVAGEDPGAESLTRYQLADHLGSSGLELDDQAQVISFEEYYPFGGTSFQSTREHTETP 2002 Query: 267 --IRLPGQQYDEESGLYYNRHRYYDPLQGRYITQDPIGLKGGWNFYQYP-LNPVQYIDSM 323 R G++ D ESGLYY RYY P GR+ + DP G + G Y Y NP++ D Sbjct: 2003 KRYRFTGKERDTESGLYYQGARYYAPWLGRWTSADPAGPRDGACPYAYVGNNPLRRTDPS 2062 Query: 324 GLASKYGHLNNGGYGARPNKPPTPDPS 350 GL N + T Sbjct: 2063 GLEGDEPEQLNFAQSPAFWQQVTATAK 2089 Score = 62.5 bits (150), Expect = 3e-08, Method: Composition-based stats. Identities = 37/287 (12%), Positives = 64/287 (22%), Gaps = 47/287 (16%) Query: 16 RYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQH-RLVHYTRTQYAEPLVESRYLYDP 74 YD GR T + Y Y RL + E + + Y+YDP Sbjct: 1662 GYDAQGRRTRV---------DYGNGTVTTYEYHPLTFRLTRLHTVRGKESVQDLSYVYDP 1712 Query: 75 LGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQPGSFTPL 134 G ++ + Y G RL Q L Sbjct: 1713 SGNLTRITDRTKQAVFFRNQRV-EAGNSYTYDSTG-RLIEAHGREHLGQLPTGQDDERRL 1770 Query: 135 IRVETATG-----ELAKTQRRSLADTLQQSGGEDGG-----SVVFPPVLVQMLDRLESEI 184 G + + ++ + L + + ++D + Sbjct: 1771 GLPHPNDGKAMARYVERYDYDAVGNLLSVRHRGSDPRHGGWTRRYHYAEASLIDPADIGN 1830 Query: 185 LADRVSEESRRWLASCGLTV-------------EQMQNQMDPVYTPARKIHLYHCDHRG- 230 V + S + A +T + + V + Y D+ G Sbjct: 1831 RLTDVGDASFAYDAHGNVTAMPELPVMAWNFKDQLSHSSRQSVDDGDAETTYYVYDNTGE 1890 Query: 231 LPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEE 277 + G Y + G D E Sbjct: 1891 RMRKVTEHGGQLRSERVY-----------LGGFEITRTYTGGDLDVE 1926 Score = 51.3 bits (121), Expect = 8e-05, Method: Composition-based stats. Identities = 33/259 (12%), Positives = 58/259 (22%), Gaps = 46/259 (17%) Query: 4 DNRIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAE 63 NR+ + YD HG +T +L ++ + +L H +R + Sbjct: 1829 GNRLTDVGDASFAYDAHGNVTAMPELP-------------VMAWNFKDQLSHSSRQSVDD 1875 Query: 64 PLVESR-YLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYG---------------- 106 E+ Y+YD G R+ K + + + L Y Sbjct: 1876 GDAETTYYVYDNTGERMRKVTEHGGQLRSERVYLGGFEITRTYTGGDLDVERQSFHVMDD 1935 Query: 107 ----WDGDRLTTIQNDRTRIQTIYQ-PGSFTPLIRVETATGELAKTQRRSLADTLQQSGG 161 DR ++ T YQ ++ + Sbjct: 1936 KKRVAIVDRRVAGEDPGAESLTRYQLADHLGSSGLELDDQAQVISFEEYYPFGGTSFQST 1995 Query: 162 EDGGSVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKI 221 + ES + WL Sbjct: 1996 REHTETPKRYRFTGKERDTESGLYYQGA-RYYAPWLGRWTSADPAGPRDGACP------- 2047 Query: 222 HLYHCDHRGLPLALVSTEG 240 + Y + PL G Sbjct: 2048 YAYVGN---NPLRRTDPSG 2063 Score = 49.4 bits (116), Expect = 3e-04, Method: Composition-based stats. Identities = 62/441 (14%), Positives = 110/441 (24%), Gaps = 76/441 (17%) Query: 16 RYDRHGRLTEKTDLIPEGVI------------RTDDERTHRYHYDSQHRLVH--YTRTQY 61 YD G+ ++ + + D+ +R YD R + Sbjct: 1473 EYDMLGQRVSQSGMDSGRRLLLDSIDALPVRAWHDNGFDYRNEYDVLRRATGYFVSGGDL 1532 Query: 62 AEPLVESRYLY-----DPLGRRVAKRVW----------RRERDLTGWMSLSRKPQVTWYG 106 + R Y D R + +V R+ D G + + T Y Sbjct: 1533 DGEIQHERIEYGETVTDASKRNLRLKVHRRFDAAGVAVNRDFDFKGNPVRATRQLATEYR 1592 Query: 107 WDGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELA--KTQRRSLADTLQQSGGEDG 164 D T + + + + +R G ++ + L D L+ G Sbjct: 1593 RSPDWSTDVPLEAAVHDSRTGYDALNRPVRTVAPDGTVSHPRFNESGLLDHLEVRVGGVE 1652 Query: 165 GSVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLY 224 + F + + + + + + + Y Sbjct: 1653 DATEFVSDVGYDAQGRRTRVDYGNGTVTTYEYHPLTFRLTRLHTVRGKESVQDLS----Y 1708 Query: 225 HCDHRGLPLALVSTEGATE----------WCAEYDEWGNLLNEENPHQLQQLIRLPGQQY 274 D G + YD G L+ L QL GQ Sbjct: 1709 VYDPSGNLTRITDRTKQAVFFRNQRVEAGNSYTYDSTGRLIEAHGREHLGQLP--TGQDD 1766 Query: 275 DEESGLYY-----NRHRY-----YDPLQGRYITQ-----DPIGLKGGWNFYQYPLNPVQY 319 + GL + RY YD G ++ DP G Y Y Sbjct: 1767 ERRLGLPHPNDGKAMARYVERYDYD-AVGNLLSVRHRGSDP-RHGGWTRRYHYAE--ASL 1822 Query: 320 IDS--MGLASKYGHLNNGGYGARPNKPPTPD--------PSKLPDIAKQLRLPYPIDQAS 369 ID +G + Y A N P+ +L ++Q + Sbjct: 1823 IDPADIGNRLTDVGDASFAYDAHGNVTAMPELPVMAWNFKDQLSHSSRQSVDDGDAETTY 1882 Query: 370 SAPNVFKTFFRALSPYDYTLY 390 + R ++ + L Sbjct: 1883 YVYDNTGERMRKVTEHGGQLR 1903 >UniRef50_B7GLY4 Rhs family protein n=3 Tax=Anoxybacillus flavithermus WK1 RepID=B7GLY4_ANOFW Length = 563 Score = 201 bits (510), Expect = 6e-50, Method: Composition-based stats. Identities = 67/323 (20%), Positives = 106/323 (32%), Gaps = 40/323 (12%) Query: 14 LYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYLYD 73 YRYD +G T+ E ++ Y YD+ +LV + Y YD Sbjct: 121 TYRYDENGNRTKIESPTGEAIV---------YRYDALDQLVEEQWPDG----TKIEYTYD 167 Query: 74 PLGRRVAKRVWRRERDLTGWMSLSRKPQVTWY-----GWDGDRLTTIQNDRTRIQTIYQP 128 G R + + T + Q+ + +D + Q Y+ Sbjct: 168 GFGNRKQIVKTKDGQSTTTTADYNAANQLVRFGDETITYDANGNRLEDG-----QYQYEW 222 Query: 129 GSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADR 188 + L+ + + D + G + D L D Sbjct: 223 NAADQLVSITRKGESTPFVTYQYDEDGRRIQKTVSGVVTNYHYQ----GDSLNVLYETDA 278 Query: 189 VSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWCAEY 248 + ++ + M+ + YH + G +AL +G EY Sbjct: 279 SGNVVQSYVYGENGQLLAMKKGGA--------TYFYHYNAHGDVIALTDAQGNVVARYEY 330 Query: 249 DEWGNLLNEENPHQLQQLIRLPGQQYDEESGLYYNRHRYYDPLQGRYITQDPI-GLKGGW 307 D WG + ++ + R G QYDEE+GLYY RYY P G +++ DP G Sbjct: 331 DTWGQIRSQTGVLADENPYRYAGYQYDEETGLYYLMARYYHPTHGVFLSLDPDPGDADDI 390 Query: 308 ---NFYQYP-LNPVQYIDSMGLA 326 N Y Y NPV +D G Sbjct: 391 LTQNGYTYANNNPVMLVDPDGHF 413 Score = 80.2 bits (196), Expect = 1e-13, Method: Composition-based stats. Identities = 42/252 (16%), Positives = 77/252 (30%), Gaps = 38/252 (15%) Query: 3 PDNRIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYA 62 N++ R YD +G E + ++Y +++ +LV TR + Sbjct: 192 AANQLVRFGDETITYDANGNRLE--------------DGQYQYEWNAADQLVSITRKGES 237 Query: 63 EPLVESRYLYDPLGRRVAKRVWRRERDLTG----------WMSLSRKPQVTWYGWDGDRL 112 P V Y YD GRR+ K V + + Q YG +G L Sbjct: 238 TPFVT--YQYDEDGRRIQKTVSGVVTNYHYQGDSLNVLYETDASGNVVQSYVYGENGQLL 295 Query: 113 TTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPV 172 + T Y + +I + A G + ++ G + Sbjct: 296 AMKKGGAT---YFYHYNAHGDVIALTDAQGNVVARYEYDTWGQIRSQTGVLADENPYRYA 352 Query: 173 LVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLP 232 Q + +R + + G+ + + D + + Y + P Sbjct: 353 GYQY------DEETGLYYLMARYYHPTHGVFLSLDPDPGDADDILTQNGYTYANN---NP 403 Query: 233 LALVSTEGATEW 244 + LV +G W Sbjct: 404 VMLVDPDGHFVW 415 >UniRef50_A1TSU8 YD repeat protein n=4 Tax=Acidovorax RepID=A1TSU8_ACIAC Length = 1586 Score = 201 bits (510), Expect = 6e-50, Method: Composition-based stats. Identities = 86/405 (21%), Positives = 130/405 (32%), Gaps = 70/405 (17%) Query: 4 DNRIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQY-A 62 +RIAR YRYD G L R Y YD R++ R + Sbjct: 1094 GDRIAR----QYRYDPTGHLI---------ATRDGLRGESHYRYDPLGRILAAQRGEGKQ 1140 Query: 63 EPLVESRYLYDPLGRRVAKRVWRRERDL--------TGWMSLSRKPQVTWYGWDGDRLTT 114 +P + +DP G + + + Y G+ + Sbjct: 1141 QPTERETFAFDPAGNLLNPNRGGAQSSGGVGQRDVVPHNRLAVYQDLRFTYDLHGNTIER 1200 Query: 115 IQNDRTRIQTIYQPGSFTPLIRVET---------------ATGELAKTQRRSLADTLQQS 159 T Y P RV T ++ + +L + + Sbjct: 1201 RIGWHTVQHYRYSPEHQIVEARVVRYRERPAEGHAEPAPATTEQVTHYRYDALGRRIDKR 1260 Query: 160 GGEDGGSVVFPPVLVQMLDR----LESEILADRVSEESRRWLASCGLTVEQMQNQMDPVY 215 + ++ L+ R E D ++ G ++ + Sbjct: 1261 DAFGRTAFLYDGDLLAGELRGSKLSEYLYEPDSFVPLAKLESEWKGEAAKERDEDKESAR 1320 Query: 216 TPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLN----EENPHQ--------- 262 + Y CD G P L +G W A Y WG Sbjct: 1321 PKDFAAYYYQCDQIGAPQELTDEQGRIVWAASYQVWGQTRALQVMRTGTDDAAVFTQAER 1380 Query: 263 ---------------LQQLIRLPGQQYDEESGLYYNRHRYYDPLQGRYITQDPIGLKGGW 307 ++Q +R GQ +D E+GL+YNR RYYDP+ GR++ QDPIGL GG Sbjct: 1381 PLALAAKGDVQALNFVEQPLRFQGQYFDGETGLHYNRFRYYDPVTGRFVHQDPIGLAGGN 1440 Query: 308 NFYQYPLNPVQYIDSMGLASKYGHLNNGGYG-ARPNKPPTPDPSK 351 N + Y NP+ + D +GL K G A+ P+P PS Sbjct: 1441 NLFFYAPNPLIWNDPLGLKPKRCGCRPDPCGIAKHGHQPSPRPSD 1485 Score = 86.0 bits (211), Expect = 2e-15, Method: Composition-based stats. Identities = 47/284 (16%), Positives = 70/284 (24%), Gaps = 59/284 (20%) Query: 6 RIARDAHYLYRYDRHGRLTEKTDLIPEGV------------IRTDDERTHRYHYDSQHRL 53 R A +R+D G L TD I R HYD + L Sbjct: 626 RDALGRTTRWRFDARGNLLAVTDAAGATTRLAYGHLDLPVEITDALGHVWRQHYDERGNL 685 Query: 54 VHYTRTQYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSR-------KPQVTWYG 106 +R+ YD G VA + W + Q T Y Sbjct: 686 AERVDPLGH----ATRWRYDARGLPVAIEDAHGKTRRLLWDDAGQLVAYTDCSGQTTRYT 741 Query: 107 WDGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGS 166 WD D T Y+ + L V G + + + + + + Sbjct: 742 WDTLGNLLTSTDALGQTTRYRHDALGRLRHVVGPDGSEHRYDFDAQGNLTAYTDPQGAAT 801 Query: 167 VVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHC 226 R+ + Q+ + + H Sbjct: 802 ----------------------------RYAYNGLDQPVLRQDAL------GGTLRYQH- 826 Query: 227 DHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRLP 270 D G +AL + G YD NL+ E Q R Sbjct: 827 DAVGRIVALQNENGDIT-RFTYDAADNLIEEIGFDGRIQRYRYN 869 Score = 79.9 bits (195), Expect = 2e-13, Method: Composition-based stats. Identities = 40/303 (13%), Positives = 74/303 (24%), Gaps = 68/303 (22%) Query: 10 DAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESR 69 Y +D G L TD + +T RY +D+ RL H + E R Sbjct: 735 GQTTRYTWDTLGNLLTSTDAL---------GQTTRYRHDALGRLRHVVGPDGS----EHR 781 Query: 70 YLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQPG 129 Y +D G A + T Y ++G ++ D YQ Sbjct: 782 YDFDAQGNLTAYTDPQGAA--------------TRYAYNGLDQPVLRQDALGGTLRYQHD 827 Query: 130 SFTPLIRVETATGELAKTQRRSLA------------DTLQQSGGEDGGSVVFPPVLVQML 177 + ++ ++ G++ + + + + + + + Sbjct: 828 AVGRIVALQNENGDITRFTYDAADNLIEEIGFDGRIQRYRYNAAGELAELHERDARLPPD 887 Query: 178 DRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVS 237 + + A R A L + + + D G L + Sbjct: 888 TPYDPDPAAPLPKRTVFRRDAVGRLVAKAHLGPDGMEEGAGSGLTTFAYDLLGRMLHAGN 947 Query: 238 TEGAT-----------------------------EWCAEYDEWGNLLNEENPHQLQQLIR 268 + W YD GN + P Sbjct: 948 GDARVHFTYDPLSRLTEEVQEHLAPEGAGTLGRYAWHHAYDALGNRTDSRMPGGRHVQWL 1007 Query: 269 LPG 271 G Sbjct: 1008 YYG 1010 Score = 77.9 bits (190), Expect = 7e-13, Method: Composition-based stats. Identities = 45/256 (17%), Positives = 79/256 (30%), Gaps = 15/256 (5%) Query: 12 HYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYL 71 ++R D GRL K L P+G+ + YD R++H + Sbjct: 901 RTVFRRDAVGRLVAKAHLGPDGMEEGAGSGLTTFAYDLLGRMLHA-----GNGDARVHFT 955 Query: 72 YDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQPGSF 131 YDPL R + + G +L R Y G+R + +Q +Y Sbjct: 956 YDPLSRLTEEVQEHLAPEGAG--TLGRYAWHHAYDALGNRTDSRMPGGRHVQWLYY--GS 1011 Query: 132 TPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSE 191 L ++ L+ +R +L ++++ G + P+ + ++ Sbjct: 1012 GHLHQIRVDGHVLSDIERDALHQEIERTQGALESRYGWDPMGRLVAHKVGRRQALQGQPG 1071 Query: 192 ESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVST-EGATEWCAEYDE 250 Q+ AR+ D G +A G YD Sbjct: 1072 MPSPQALRDRDQGLPALPQLPSGDRIARQYRY---DPTGHLIATRDGLRGE--SHYRYDP 1126 Query: 251 WGNLLNEENPHQLQQL 266 G +L + QQ Sbjct: 1127 LGRILAAQRGEGKQQP 1142 Score = 67.5 bits (163), Expect = 9e-10, Method: Composition-based stats. Identities = 64/441 (14%), Positives = 111/441 (25%), Gaps = 59/441 (13%) Query: 22 RLTEKTDLIPE--GVIRTDDERTHRYHY----DSQHRLVHYTRTQYAEPLVESRYLYDPL 75 RL + L P ++ RY Y + L +RY Y Sbjct: 468 RLLQAIHLEPRVLDGVQHAGGVLARYAYGTEGNEAGDLRANLAEAADALGGTARYRY--- 524 Query: 76 GRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQPGSFTPLI 135 + Q + + G + T + + + T ++ Sbjct: 525 -------RHHLMVAYATRNGFTHHQQWSRHDAGGRVVRTWTDTQGLLDTRFEYDLGRRTT 577 Query: 136 RVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSEESRR 195 V A G + + + + + + G V R E+ + A EE+R Sbjct: 578 HVTDALGRRSSYEYNAAHEVVAITEPGPDGRPV----------RTETRLDAAGNPEEARD 627 Query: 196 WLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLL 255 L + + V A H LP+ + G W YDE GNL Sbjct: 628 ALGRTTRWRFDARGNLLAVTDAAGATTRLAYGHLDLPVEITDALGH-VWRQHYDERGNLA 686 Query: 256 NEENPHQLQQLIRL------------PGQ----QYDEESGLYYNRHRYYDPLQGRYITQD 299 +P R G+ +D+ L RY T D Sbjct: 687 ERVDPLGHATRWRYDARGLPVAIEDAHGKTRRLLWDDAGQLVAYT--DCSGQTTRY-TWD 743 Query: 300 PIGLKGGWNFYQYPLNPVQYIDSMGLASKYGHLNNGGYGARPNKPPTPDPSKLPDIAKQL 359 +G N + D++G ++Y H G + Sbjct: 744 TLG------------NLLTSTDALGQTTRYRHDALGRLRHVVGPDGSEHRYDFDAQGNLT 791 Query: 360 RLPYPIDQASSAP-NVFKTFFRALSPYDYTLYCRKWVKPNLTCTPQDDSQYPGMDTKTAS 418 P A+ N TL + + ++ A Sbjct: 792 AYTDPQGAATRYAYNGLDQPVLRQDALGGTLRYQHDAVGRIVALQNENGDITRFTYDAAD 851 Query: 419 DYLPQTNWPTTQLPPGYTCAE 439 + + + + Y A Sbjct: 852 NLIEEIGFDGRIQRYRYNAAG 872 >UniRef50_C7QCF6 YD repeat protein n=1 Tax=Catenulispora acidiphila DSM 44928 RepID=C7QCF6_CATAD Length = 2652 Score = 200 bits (509), Expect = 8e-50, Method: Composition-based stats. Identities = 63/389 (16%), Positives = 111/389 (28%), Gaps = 67/389 (17%) Query: 9 RDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDER--THRYHYDSQHRLVHYTRTQYAEPLV 66 + Y YD G +T D + + + + + +D+ +RL+ T ++ Sbjct: 1897 EVQNLHYTYDAVGNITSIRDEAQQTIYFRNTRVEPSADFTHDAIYRLIEATGREHIGQSG 1956 Query: 67 E---------------------------SRYLYDPLGRRVAKRVWRR------------- 86 RY YD G + + Sbjct: 1957 APIPYSFDDASRVGLQHPNDGNAMRRYLERYAYDLTGNISSMQHRGSDPARSNWTRTYVY 2016 Query: 87 ---------------ERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQPGSF 131 G + + Y G+ L + Sbjct: 2017 DEASQLEPARQSNRLTGTTIGATTETYSAGGDGYDAHGNMLRMPHLGGGSPGPNMRWDYR 2076 Query: 132 TPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSV---VFPPVLVQMLDRLESEILADR 188 L + G A S +++ + G V ++ R Sbjct: 2077 DQLHETDLGGGGKAFYVYDSSGQRVRKVWEKSSGPVEERIYLGGFELFRRRENLGGEQVS 2136 Query: 189 VSEESRRWLASCGLTVEQMQNQM----DPVYTPARKIHLYHCDHRGLPLALVSTEGATEW 244 E + + ++ + P R I +H G + + Sbjct: 2137 TFERETLHVMDDTGRLALVETRTLDLAGDDKAPRRLIRYQLGNHLGSTSLELDEQAQIIS 2196 Query: 245 CAEYDEWGNLLNEENPHQLQ--QLIRLPGQQYDEESGLYYNRHRYYDPLQGRYITQDPIG 302 EY +G+ + Q + + R G++ DEESG YY+ RYY P GR+ + DP G Sbjct: 2197 YEEYAPFGSSTYQAVRSQTEATKRYRYTGKERDEESGFYYHGARYYPPWLGRWTSADPSG 2256 Query: 303 LKGGWNFYQYP-LNPVQYIDSMGLASKYG 330 + G N Y Y NP+ + DS G + Sbjct: 2257 MADGVNLYVYGRNNPLAFSDSTGTSCDPT 2285 Score = 61.7 bits (148), Expect = 6e-08, Method: Composition-based stats. Identities = 27/261 (10%), Positives = 58/261 (22%), Gaps = 35/261 (13%) Query: 16 RYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQH-RLVHYT--RTQYAEPLVESRYLY 72 YD G+ + + Y YD R+ R + + Y Y Sbjct: 1855 DYDAKGQRLRI---------VYGNGASTSYTYDPLTFRVTQLLTFRDRPGHEVQNLHYTY 1905 Query: 73 DPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGW-----DGDRLTTIQNDRTRIQTIYQ 127 D +G + R ++ + + + I I + Sbjct: 1906 DAVGNITSIRDEAQQTIYFRNTRV-EPSADFTHDAIYRLIEATGREHIGQSGAPIPYSFD 1964 Query: 128 PGSFTPLIRVETATGELAKTQRRSLA----------DTLQQSGGEDGGSVVFPPVLVQML 177 S L +R + + + V+ Sbjct: 1965 DASRVGLQHPNDGNAMRRYLERYAYDLTGNISSMQHRGSDPARSNWTRTYVYDEASQLEP 2024 Query: 178 DRLESEILADRVSEESRRWLASCGLTVEQ---MQNQMDPVYTPARKIHLYHCDHRGLPLA 234 R + + + + + A ++ +P + + D Sbjct: 2025 ARQSNRLTGTTIGATTETYSAGGDGYDAHGNMLRMPHLGGGSPGPNMRWDYRDQL----H 2080 Query: 235 LVSTEGATEWCAEYDEWGNLL 255 G + YD G + Sbjct: 2081 ETDLGGGGKAFYVYDSSGQRV 2101 >UniRef50_Q1I7Q5 Putative uncharacterized protein n=11 Tax=Pseudomonas RepID=Q1I7Q5_PSEE4 Length = 1595 Score = 200 bits (509), Expect = 9e-50, Method: Composition-based stats. Identities = 93/355 (26%), Positives = 129/355 (36%), Gaps = 83/355 (23%) Query: 4 DNRIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAE 63 DNR+ + ++YD G L + + + +D RL H Y + Sbjct: 1151 DNRLRQFDGTHFKYDERGNLIHR----------LREGKHAHLAWDLFDRLAH-----YND 1195 Query: 64 PLVESRYLYDPLGRRVAKRVWRRERD----LTGWMSLSRKPQV-------TWYGWDGDRL 112 ++ Y YD LGRR+ K D TGW + R + T +GWDG+ L Sbjct: 1196 DRLKVEYSYDALGRRLHKHSVAHYWDKPDAGTGWNQMQRAKRQRELKCGFTLFGWDGNAL 1255 Query: 113 TTIQND-------RTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGG 165 + + + +Y PGSF P+ + R+ L + G Sbjct: 1256 AWESSPARDDGDTGSTVHYLYLPGSFVPVAQA-----------VRNGPVRLHKRPDWSGR 1304 Query: 166 SVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYH 225 F + Q D I Y Sbjct: 1305 EYDFEQDPLW----------------------------------QTDVKPQAFDSIFWYQ 1330 Query: 226 CDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPH----QLQQLIRLPGQQYDEESGLY 281 CDH G P+ L EG W A Y WG+L + IR GQ D+E+GL+ Sbjct: 1331 CDHLGTPMELTDEEGHVVWAAHYKAWGDLAELPGSSVAMSNARNPIRFQGQYQDQETGLH 1390 Query: 282 YNRHRYYDPLQGRYITQDPIGLKGGWNFYQYP-LNPVQYIDSMGLASKYGHLNNG 335 YNR RYYDP RY+++DPIG GG N Y Y +PV D MGL S + Sbjct: 1391 YNRFRYYDPKSARYVSKDPIGFMGGANAYTYTGGSPVTATDPMGLKSWEWNGTGD 1445 Score = 75.6 bits (184), Expect = 4e-12, Method: Composition-based stats. Identities = 50/319 (15%), Positives = 80/319 (25%), Gaps = 42/319 (13%) Query: 8 ARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVE 67 A Y YD + D Y YD Q +L+ + Sbjct: 660 ADGGQDRYVYDERSNRLQ---------HIRADHSVVHYAYDDQDQLIKLLDAEGGL---- 706 Query: 68 SRYLYDPLGRRVA-------KRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRT 120 R YD +G V K + ++ D + Sbjct: 707 WRRDYDAVGNLVETVDPLGNKTEFAYTSTGQLKAIKDANGNEKKLAYNAAGQLLEYTDCS 766 Query: 121 RIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRL 180 + + F L++ A GE + A L + D F L Sbjct: 767 GKSSQWAYDEFGRLVQATNAMGEQVQYAY--KAGQLAKVTHPDQTEERFERDAEGRL--- 821 Query: 181 ESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEG 240 + + W + + V + H D G + L + Sbjct: 822 ---LAHVDALDRCTTWSYTPAGLPSER------VDATEHTLRC-HWDKLGRLVGL-DNQN 870 Query: 241 ATEWCAEYDEWGNLLNEENPHQLQQLIRL---PGQQYDEESGLYYNRHRYYDPLQGRYIT 297 + YD G LL E L + G+ + G R+ GR I Sbjct: 871 ESRATFSYDVVGRLLAETGFDGLVKQYHYDPLTGRLAHTQVGQRRITMRFD--RMGRLIE 928 Query: 298 Q-DPIGLKGGWNFYQYPLN 315 + +G + Y Y N Sbjct: 929 RTASLGEQVESEHYAYNGN 947 Score = 62.9 bits (151), Expect = 2e-08, Method: Composition-based stats. Identities = 40/248 (16%), Positives = 69/248 (27%), Gaps = 37/248 (14%) Query: 14 LYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYLYD 73 + YD GRL + T+ + E V +Y Y +L T E R+ D Sbjct: 771 QWAYDEFGRLVQATNAMGEQV---------QYAY-KAGQLAKVTHPD----QTEERFERD 816 Query: 74 PLGRRVAKRVW---RRERDLTGWMSLSRKPQVTWYG----WDGDRLTTIQNDRTRIQTIY 126 GR +A T S + T + WD +++ + + Sbjct: 817 AEGRLLAHVDALDRCTTWSYTPAGLPSERVDATEHTLRCHWDKLGRLVGLDNQNESRATF 876 Query: 127 QPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILA 186 L+ G + + L L + + + RL + Sbjct: 877 SYDVVGRLLAETGFDGLVKQYHYDPLTGRLAHTQVGQRR----ITMRFDRMGRLIERTAS 932 Query: 187 DRVSEESRRWLASCGLTVEQMQNQMDPV----YTPARKIH-LYHCDHRGLPLALVSTEGA 241 ES + + + Q +N + + H G P+ Sbjct: 933 LGEQVESEHYAYNGNGQLLQARNAASLLQWFHDEAGNMVREHQHYLAIGTPMVA------ 986 Query: 242 TEWCAEYD 249 W EYD Sbjct: 987 -VWQHEYD 993 Score = 54.8 bits (130), Expect = 7e-06, Method: Composition-based stats. Identities = 42/264 (15%), Positives = 64/264 (24%), Gaps = 38/264 (14%) Query: 45 YHYDSQHRLVHYTRTQYAEPLVE------SRYLYDPLGRRVAKRVWRRERDLTGWMSL-S 97 YHYD L+ A + +RY D GR Sbjct: 538 YHYDDHGDLIAAQDEHGAAWQYQYQHHLITRYT-DRTGRGQHLEWDGSGPHARAIREWAD 596 Query: 98 RKPQVTWYGWDGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELA------------ 145 T WD T D QT + + R++ A G Sbjct: 597 DGSFETRLAWDTHIRLTTVTDAHGGQTRHYYDAEGYTYRIQHADGRSEWLFRDTRKNVIR 656 Query: 146 ---------KTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESE-------ILADRV 189 + ++ LQ + Q++ L++E A Sbjct: 657 HLHADGGQDRYVYDERSNRLQHIRADHSVVHYAYDDQDQLIKLLDAEGGLWRRDYDAVGN 716 Query: 190 SEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWCAEYD 249 E+ L + Q+ + + G L G YD Sbjct: 717 LVETVDPLGNKTEFAYTSTGQLKAIKDANGNEKKLAYNAAGQLLEYTDCSGK-SSQWAYD 775 Query: 250 EWGNLLNEENPHQLQQLIRL-PGQ 272 E+G L+ N Q GQ Sbjct: 776 EFGRLVQATNAMGEQVQYAYKAGQ 799 Score = 49.8 bits (117), Expect = 2e-04, Method: Composition-based stats. Identities = 62/441 (14%), Positives = 107/441 (24%), Gaps = 56/441 (12%) Query: 7 IARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHR--LVHYTRTQYAEP 64 ++R Y+R G + +R T Y + + R L Q +P Sbjct: 448 LSRGQERRETYERVGERFYLVHI----RMRNGVGATLHYEHFHEGRPVLSDINTYQDDDP 503 Query: 65 LVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQT 124 LG + + + R+ Y GD + Q Sbjct: 504 TKVHL----QLGTLLDEHGHIQGLWQVVDGKPLRQLCAYHYDDHGDLIAAQDEHGAAWQY 559 Query: 125 IYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEI 184 YQ T L A +++ + + Sbjct: 560 QYQHHLITRYTDRTGRGQHLEWDGSGPHARAIREWADDGSFETRLAWDT-----HIRLTT 614 Query: 185 LADRVSEESRRWLASCGLTVEQMQNQMDPV----YTPARKIHLYHCDHRGLPLALVSTEG 240 + D ++R + + G T T I H D G + Sbjct: 615 VTDAHGGQTRHYYDAEGYTYRIQHADGRSEWLFRDTRKNVIRHLHADG-GQDRYVYDERS 673 Query: 241 ATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEESGLYYNRHRYYDPLQGRYITQDP 300 D + + QLI + D E GL+ R YD Sbjct: 674 NRLQHIRAD---HSVVHYAYDDQDQLI----KLLDAEGGLWR---RDYDA---------- 713 Query: 301 IGLKGGWNFYQYPLNPVQYIDSMGLASKYGHLNNGGYGARPNKPPTPDPSKLPDIAKQLR 360 N V+ +D +G +++ + + G + + A QL Sbjct: 714 ------------VGNLVETVDPLGNKTEFAYTSTGQL-KAIKDANGNEKKLAYNAAGQLL 760 Query: 361 LPYPIDQASS--APNVFKTFFRALSPYDYTLYCRKWVKPNLTCTPQDDSQYPGMDTKTAS 418 SS A + F +A + + + L D + Sbjct: 761 EYTDCSGKSSQWAYDEFGRLVQATNAMGEQVQYA-YKAGQLAKVTHPDQTEERFERDAEG 819 Query: 419 DYLPQTNWPTTQLPPGYTCAE 439 L + YT A Sbjct: 820 RLLAHVDALDRCTTWSYTPAG 840 >UniRef50_C5AA19 Rhs family protein n=1 Tax=Burkholderia glumae BGR1 RepID=C5AA19_BURGB Length = 1596 Score = 200 bits (508), Expect = 1e-49, Method: Composition-based stats. Identities = 99/489 (20%), Positives = 148/489 (30%), Gaps = 86/489 (17%) Query: 10 DAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESR 69 A Y YD +LT+ D + Y YD RL+ R Sbjct: 1091 LAARHYCYDAASQLTQVDDS---------QAGSTGYRYDPVGRLIEAVTPNLG-----ER 1136 Query: 70 YLYDPLGRRVAKRVWRRERDLTGWMSLSRKP--------------------QVTWYGWDG 109 + +DP G V + ++ P T + +D Sbjct: 1137 FAFDPAGNFVDAAAPGLPAAGSIAGAVGYVPPGTTQAAPLPRVLGNLLRDYAGTHFEYDA 1196 Query: 110 DRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAK---TQRRSLADTLQQSGGEDGGS 166 T + R+Q ++ F L+ V T T + + + Sbjct: 1197 QGNVTEKRSPGRVQ-RFEWDGFNRLVGVRTETATTRTEARYFYDAFGRRIARVVDGQASV 1255 Query: 167 VVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPV------------ 214 + + + E SR +L G V Q PV Sbjct: 1256 FGWDGDT----------LAYESGPEYSRHYLYEAGTFVPLAQYTGAPVTGMPTPVAREHE 1305 Query: 215 --------------YTPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLL----- 255 ++ YHCD G P + G W A Y WG Sbjct: 1306 RYTPEDDPLLRVPERGAEARLAFYHCDQIGTPRMITDELGEIVWEARYQAWGEARDVIER 1365 Query: 256 -NEENPHQLQQLIRLPGQQYDEESGLYYNRHRYYDPLQGRYITQDPIGLKGGWNFYQYPL 314 ++ +++ +R GQ +D+ESGL YNRHRYY GRY+++DP L GG N + Y Sbjct: 1366 VSKATGERVRNPLRFQGQHFDDESGLAYNRHRYYAADVGRYVSKDPAELLGGLNEFAYVP 1425 Query: 315 NPVQYIDSMGLASKYGHLNNGGYGARPNKPPTPDPSKLPDIAKQLRLPYPIDQASSAPNV 374 NPVQ+ID +GLA G P P A+ + P S NV Sbjct: 1426 NPVQWIDPLGLAGTPAGGAGGKPARCPKCNPCEG-RNPTATARSWQGTDPYSGVDSYQNV 1484 Query: 375 FKTFFRALSPYDYTLYC-RKWVKPNLTCTPQDDSQYPGMDTKTASDYLPQTNWPTTQLPP 433 L YTLY + + + + + N + Sbjct: 1485 VVKRGTVL----YTLYPHGPAPGNYFVTSSGVLASSTAREYNDSVQVAHKGNASGRGIRD 1540 Query: 434 GYTCAEPYL 442 T Y+ Sbjct: 1541 MRTQLHAYV 1549 Score = 93.7 bits (231), Expect = 1e-17, Method: Composition-based stats. Identities = 47/285 (16%), Positives = 81/285 (28%), Gaps = 45/285 (15%) Query: 13 YLYRYDRHGRLTEKTDLIPEG------------VIRTDDERTHRYHYDSQHRLVHYTRTQ 60 Y YD GR E TD +T + YD++ RLV T Sbjct: 748 TRYVYDGAGRPVEVTDAKGGTKLMAYDDAGQLASYTDCSGKTSTWTYDARGRLVAATDAA 807 Query: 61 YAEPLVE----------------SRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVT- 103 R+ YD GR +A + + + R T Sbjct: 808 GGTTAYRYAANGTLEEASSAAGVERFQYDAEGRLLASTDALQRVTRFTYDAAGRIGARTD 867 Query: 104 ------WYGWDGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQ 157 YG+D D ++ + L+ G+L + + + + L Sbjct: 868 AAGHTLSYGYDRIGRLVRLTDANHASFQFRYDALGRLLETVGFDGKLTRYEYDADSGQLA 927 Query: 158 QSGGEDGGSVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTP 217 + V +++ + E+ + R + + ++Q+ DPV Sbjct: 928 SIDDAGRITQVEYDRGGRLVRHVSGEVEERFAYDALGRLIDARNAHS-RVQHFYDPVGNL 986 Query: 218 ARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQ 262 R+ H L + W YDE G + P Sbjct: 987 VREHH---------ASMLFGEARSVVWHHAYDELGARVRTVRPDG 1022 Score = 67.1 bits (162), Expect = 1e-09, Method: Composition-based stats. Identities = 37/279 (13%), Positives = 64/279 (22%), Gaps = 41/279 (14%) Query: 8 ARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVE 67 A YD L + D HYD + ++V Q Sbjct: 680 ADGGVERMHYDARDNLVR---------HQRVDGSVLEMHYDEKDQMVRLVDPQG----YA 726 Query: 68 SRYLYDPLGRRVA-------KRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRT 120 + YD G A K + + K +D D + Sbjct: 727 WQREYDDQGNVSADIDPLGHKTRYVYDGAGRPVEVTDAKGGTKLMAYDDAGQLASYTDCS 786 Query: 121 RIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRL 180 + + + L+ A G + + + S + + Sbjct: 787 GKTSTWTYDARGRLVAATDAAGGTTAYRYAANGTLEEASSAAGVERFQYDAEGRLLASTD 846 Query: 181 ESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEG 240 + + + + R + A Y D G + L Sbjct: 847 ALQRVTRFTYDAAGR---------------IGARTDAAGHTLSYGYDRIGRLVRLTDAN- 890 Query: 241 ATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEESG 279 + YD G LL +YD +SG Sbjct: 891 HASFQFRYDALGRLLETVGFDGKLTRY-----EYDADSG 924 Score = 67.1 bits (162), Expect = 1e-09, Method: Composition-based stats. Identities = 72/443 (16%), Positives = 120/443 (27%), Gaps = 79/443 (17%) Query: 18 DRHGR-LTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTR--TQYAEPLVESRYLYDP 74 DR G +T D + + +D R+V + A +RY YD Sbjct: 503 DRAGNQITLDYDQRGRPARLIAPQAIVVFLHDDAGRIVEAVHHDREGARLATLARYSYDR 562 Query: 75 LGRRVA--KRVWRRERDLTGWMSLSRKPQVT----WYGWDGDRL----TTIQNDRTRIQT 124 G VA R L+ T W+G D T Sbjct: 563 DGDLVAAFDEYGNRREYRYQHHLLTHYTDRTGRGMHLEWNGTGARAKCVREYADDGSFDT 622 Query: 125 IYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEI 184 + ++ V A G + + T + + G ++ + + + Sbjct: 623 RFAWHPNFRMVSVTDAHGGVTRHYYDRHGYTFRIIHPDGGEEWMY-----RDANHNLVQH 677 Query: 185 LADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEW 244 E + A L Q + ++H D + LV +G W Sbjct: 678 TYADGGVERMHYDARDNLVRHQRVDGSVL------EMHYDEKDQM---VRLVDPQGY-AW 727 Query: 245 CAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEESGLYYNRHRYYDPLQGRYITQDPIGL- 303 EYD+ GN+ + +P + G GR P+ + Sbjct: 728 QREYDDQGNVSADIDPLGHKTRYVYDG--------------------AGR-----PVEVT 762 Query: 304 --KGGWNFYQY--PLNPVQYIDSMGLASKYGHLNNGGYGARPNKPPTPDPSKLPDIAKQL 359 KGG Y Y D G S + + G A + A + Sbjct: 763 DAKGGTKLMAYDDAGQLASYTDCSGKTSTWTYDARGRLVAATDAAGGT-------TAYRY 815 Query: 360 RLPYPIDQASSAPNVFKTFFRALSPYDYTLYCRKWVKPNLTCTPQDDSQYPGMDTKTASD 419 +++ASSA V + + A + L +T A Sbjct: 816 AANGTLEEASSAAGVERFQYDA----EGRLLASTDALQRVT----------RFTYDAAGR 861 Query: 420 YLPQTNWPTTQLPPGYTCAEPYL 442 +T+ L GY + Sbjct: 862 IGARTDAAGHTLSYGYDRIGRLV 884 Score = 65.6 bits (158), Expect = 4e-09, Method: Composition-based stats. Identities = 47/303 (15%), Positives = 78/303 (25%), Gaps = 40/303 (13%) Query: 3 PDNRIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYA 62 P IA A ++ +D GR+ E EG RY YD LV Sbjct: 519 PARLIAPQAIVVFLHDDAGRIVEAVHHDREGARLA---TLARYSYDRDGDLVAAFDEYGN 575 Query: 63 EPLVE------SRYLYDPLGRRVAKRVWRRERDLTGWMSL-SRKPQVTWYGWDGD-RLTT 114 + Y D GR + T + W + R+ + Sbjct: 576 RREYRYQHHLLTHYT-DRTGRGMHLEWNGTGARAKCVREYADDGSFDTRFAWHPNFRMVS 634 Query: 115 IQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLV 174 + + + Y R+ G R + + +Q + + G + Sbjct: 635 VTDAHGGVTRHY-YDRHGYTFRIIHPDGGEEWMYRDANHNLVQHTYADGGVERMHYDARD 693 Query: 175 -----QMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVY--TPARKIHLYHCD 227 Q +D E+ D + R + +Q + P Y D Sbjct: 694 NLVRHQRVDGSVLEMHYDEKDQMVRLVDPQGYAWQREYDDQGNVSADIDPLGHKTRYVYD 753 Query: 228 HRGLPLALVSTEGAT--------------------EWCAEYDEWGNLLNEENPHQLQQLI 267 G P+ + +G T YD G L+ + Sbjct: 754 GAGRPVEVTDAKGGTKLMAYDDAGQLASYTDCSGKTSTWTYDARGRLVAATDAAGGTTAY 813 Query: 268 RLP 270 R Sbjct: 814 RYA 816 Score = 60.2 bits (144), Expect = 2e-07, Method: Composition-based stats. Identities = 37/290 (12%), Positives = 65/290 (22%), Gaps = 34/290 (11%) Query: 14 LYRYDRHGRLTEKTDLIPEGVIRTDD-ERTHRYH----------YDSQHRLVHYTRTQYA 62 Y YDR G L D Y ++ R Sbjct: 557 RYSYDRDGDLVAAFDEYGNRREYRYQHHLLTHYTDRTGRGMHLEWNGTGARAKCVREYAD 616 Query: 63 EPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRK-------PQVTWYGWDGDRLTTI 115 + ++R+ + P R V+ + W D + Sbjct: 617 DGSFDTRFAWHPNFRMVSVTDAHGGVTRHYYDRHGYTFRIIHPDGGEEWMYRDANHNLVQ 676 Query: 116 QNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQ 175 + L+R + G + + D + + G + Sbjct: 677 HTYADGGVERMHYDARDNLVRHQRVDGSVLEM-HYDEKDQMVRLVDPQGYAWQREYDDQG 735 Query: 176 MLDRLE------SEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPA--RKIHLYHCD 227 + + + D A G + + K + D Sbjct: 736 NVSADIDPLGHKTRYVYDGAGRPVEVTDAKGGTKLMAYDDAGQLASYTDCSGKTSTWTYD 795 Query: 228 HRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEE 277 RG +A G T Y G L + ++ R YD E Sbjct: 796 ARGRLVAATDAAGGTTA-YRYAANGTLEEASSAAGVE---RFQ---YDAE 838 Score = 57.5 bits (137), Expect = 1e-06, Method: Composition-based stats. Identities = 50/379 (13%), Positives = 85/379 (22%), Gaps = 105/379 (27%) Query: 13 YLYRYDR----------HGRLTEKT-DLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQY 61 Y YD GR+T+ D V E R+ YD+ RL+ Sbjct: 915 TRYEYDADSGQLASIDDAGRITQVEYDRGGRLVRHVSGEVEERFAYDALGRLIDAR---- 970 Query: 62 AEPLVESRYLYDPLGRRVAKRV------------WRRERDLTGWMSLSRKPQVTWYGW-- 107 ++ YDP+G V + W D G + +P W Sbjct: 971 -NAHSRVQHFYDPVGNLVREHHASMLFGEARSVVWHHAYDELGARVRTVRPDGHRVDWLT 1029 Query: 108 -----------DG-------------------------------------DRLTTIQNDR 119 DG L Sbjct: 1030 YGSGYVHGMALDGEERVQFERDDLHREVRRALPGKLVGETTRDPAGRLAKQALHREDAPA 1089 Query: 120 TRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDR 179 Y + + L +V+ + + + ++ G F P +D Sbjct: 1090 ALAARHYCYDAASQLTQVDDSQAGSTGYRYDPVGRLIEAVTPNLGERFAFDPAGN-FVDA 1148 Query: 180 LESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLA----- 234 + A + ++ + + + H D +G Sbjct: 1149 AAPGLPAAGSIAGAVGYVPPGTTQAAPLPRVLGNLLRDYAGTHF-EYDAQGNVTEKRSPG 1207 Query: 235 -----LVSTEGATEW------------CAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEE 277 YD +G + Q + G E Sbjct: 1208 RVQRFEWDGFNRLVGVRTETATTRTEARYFYDAFGRRIARVVDGQAS-VFGWDGDTLAYE 1266 Query: 278 SGLYYNRHRYYDPLQGRYI 296 SG Y R+Y G ++ Sbjct: 1267 SGPEY--SRHYLYEAGTFV 1283 >UniRef50_Q2SIG5 Rhs family protein n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SIG5_HAHCH Length = 1427 Score = 200 bits (507), Expect = 1e-49, Method: Composition-based stats. Identities = 75/328 (22%), Positives = 124/328 (37%), Gaps = 33/328 (10%) Query: 8 ARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAE-PLV 66 A YD G +T ++ + ++Y YD +RL+ + L Sbjct: 953 NPIARVTLGYDSVGNITSQSTEHGD----------YQYSYDKLYRLIDADYPESDAFNLQ 1002 Query: 67 ESRYLYDPLGRRVAKRVWRRERDLTGWMSLSR---KPQVTWYGWDGDRLT---TIQNDRT 120 + + YD + RVA + R + + + T+Y +D + +I + Sbjct: 1003 DESFEYDGVSNRVAHTILARPEREELEYNEANQLIRQGDTYYHYDHNGHLISKSIDKNGD 1062 Query: 121 RIQTIYQPGSFTPLIRVE-TATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDR 179 Y + LIRVE G +A + + ++ + Sbjct: 1063 HPTYKYIYNNKERLIRVEAGGDGIVASYGYNPFGHRMWKEVDGLKTYFLYNHSGM----- 1117 Query: 180 LESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTE 239 D + + + G T + Y DH G P + S Sbjct: 1118 ---VGEYDSFGALIKEYHYTPGNT----WMTSPLFQRAGENTYYYQNDHLGAPRQMASRN 1170 Query: 240 GATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEESGLYYNRHRYYDPLQGRYITQD 299 G W A Y+ +G + + + +R PGQ +D+ESG+++N R Y+P GRYI +D Sbjct: 1171 GQIVWKAAYEVFGRVKIF--VDKAENNLRFPGQYFDQESGMHHNYFRDYNPGYGRYIQRD 1228 Query: 300 PIGLKGGWNFYQYPL-NPVQYIDSMGLA 326 PI + GG N Y Y NPV Y+D +GLA Sbjct: 1229 PISVYGGINVYAYANGNPVVYMDPLGLA 1256 Score = 77.2 bits (188), Expect = 1e-12, Method: Composition-based stats. Identities = 44/294 (14%), Positives = 82/294 (27%), Gaps = 44/294 (14%) Query: 6 RIARDAHYLYR--YDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAE 63 R A Y D +G + + Y Y++ + + TR + Sbjct: 489 RTASIGGATYTENLDTYGN---------AKSVVNPEGNVSTYTYNALGQAITETRPEGG- 538 Query: 64 PLVESRYLYDPLGRRVA-----KRVWRRERDLTGWMSLSRKPQV--TWYGWDGDRLTTIQ 116 Y YD G ++ KRV E D G + + P YG++ T Sbjct: 539 ---VYTYSYDDAGNLLSIEDPLKRVTSFEYDPAGNLIKTTLPNTGEVRYGYNKLNEQTSV 595 Query: 117 NDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQM 176 + ++ A G + ++ Q +V F + Sbjct: 596 TSHYGSVFKSEYNHNNRVLTFTDALGNQSLIRKTPHGQIDYQRDANGNETVYFFDDFL-- 653 Query: 177 LDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALV 236 + +++ + N+ D + + D G L Sbjct: 654 -------VKEAEYPTFTQQIDYDKSRWAAAVTNKFDGQEQRSN----FERDSIGRVSNLT 702 Query: 237 STEGATEWCAEYDEWGNLLNEENPHQLQQLIRLPG-----QQYDEE---SGLYY 282 E + EYD +G ++ + Q + G + D E +G Y Sbjct: 703 DAESNST-QFEYDVFGRVVKSTDAEQGVTQLAYDGWDNLIKLIDPENRVTGFTY 755 Score = 65.2 bits (157), Expect = 5e-09, Method: Composition-based stats. Identities = 34/287 (11%), Positives = 72/287 (25%), Gaps = 52/287 (18%) Query: 8 ARDAHYLYRYDRHGRLTEKTDLIPEGV------------IRTDDERTHRYHYDSQHRLVH 55 A + YD GR+ + TD + + R + YD +++ Sbjct: 704 AESNSTQFEYDVFGRVVKSTDAEQGVTQLAYDGWDNLIKLIDPENRVTGFTYDKNNQVKS 763 Query: 56 YTRTQYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRK--------------PQ 101 R V Y YD G + + ++ + + Q Sbjct: 764 ERRFPDGVNAVTRFYFYDENGNLIKEITPNGQKIFYHYDLADQLEKIEYFATEIAVAPEQ 823 Query: 102 VTWYGWDGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKT--QRRSLADTLQQS 159 VT + ++ D Y+ LI G +KT ++ Sbjct: 824 VTTFTYNSLGQIETYGDGDTSGQ-YRYNLMGQLIESTINYGPFSKTIKYSYDKNGRVRTY 882 Query: 160 GGEDGGSVVFPPV-----------------LVQMLDRLESEILADRVSEESRRWLASCGL 202 + + + + ++I +R + + Sbjct: 883 TNPENVTYSYGYDPKGQIQTINIPGEGLLTFNRYSWNQPTQITLPGGMTINRVYDGLQRV 942 Query: 203 TVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWCAEYD 249 Q+ + + + D G + + G + YD Sbjct: 943 KENQLDDPANNPIARVTLGY----DSVGNITSQSTEHGD--YQYSYD 983 Score = 56.4 bits (134), Expect = 2e-06, Method: Composition-based stats. Identities = 32/200 (16%), Positives = 65/200 (32%), Gaps = 20/200 (10%) Query: 5 NRIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEP 64 N++ R Y YD +G L K+ + + D T++Y Y+++ RL+ + Sbjct: 1034 NQLIRQGDTYYHYDHNGHLISKS------IDKNGDHPTYKYIYNNKERLIRV---EAGGD 1084 Query: 65 LVESRYLYDPLGRRVAKRVWRRERDLTG--------WMSLSRKPQVTWYGWDGDRLTTIQ 116 + + Y Y+P G R+ K V + + S + Y G+ T Sbjct: 1085 GIVASYGYNPFGHRMWKEVDGLKTYFLYNHSGMVGEYDSFGALIKEYHYTP-GNTWMTSP 1143 Query: 117 --NDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLV 174 YQ ++ + G++ + ++ + ++ FP Sbjct: 1144 LFQRAGENTYYYQNDHLGAPRQMASRNGQIVWKAAYEVFGRVKIFVDKAENNLRFPGQYF 1203 Query: 175 QMLDRLESEILADRVSEESR 194 + D R Sbjct: 1204 DQESGMHHNYFRDYNPGYGR 1223 Score = 54.4 bits (129), Expect = 8e-06, Method: Composition-based stats. Identities = 37/299 (12%), Positives = 71/299 (23%), Gaps = 66/299 (22%) Query: 6 RIARDAHYLYRYDRHGRLT------------------------EKTDLIPEGVIRTDDER 41 R Y+ D +G T + E+ Sbjct: 627 RKTPHGQIDYQRDANGNETVYFFDDFLVKEAEYPTFTQQIDYDKSRWAAAVTNKFDGQEQ 686 Query: 42 THRYHYDSQHRLVHYTRTQYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRK-- 99 + DS R+ + T + +++ YD GR V + + Sbjct: 687 RSNFERDSIGRVSNLTDAESNS----TQFEYDVFGRVVKSTDAEQGVTQLAYDGWDNLIK 742 Query: 100 -----PQVTWYGWDGDRLTTIQN----DRTRIQTIYQPGSFTPLIRVETATGELAKTQRR 150 +VT + +D + + + Y LI+ T G+ Sbjct: 743 LIDPENRVTGFTYDKNNQVKSERRFPDGVNAVTRFYFYDENGNLIKEITPNGQKIFY-HY 801 Query: 151 SLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQ 210 LAD L++ V P + +I + S ++ + + + Sbjct: 802 DLADQLEKIEYFATEIAVAPEQVTTFTYNSLGQIETYGDGDTSGQYRYNLMGQLIESTIN 861 Query: 211 MDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRL 269 P YD+ G + NP + Sbjct: 862 YGPFSKTI--------------------------KYSYDKNGRVRTYTNPENVTYSYGY 894 >UniRef50_A3KUM5 Rhs family protein n=10 Tax=Pseudomonas aeruginosa RepID=A3KUM5_PSEAE Length = 931 Score = 200 bits (507), Expect = 1e-49, Method: Composition-based stats. Identities = 77/323 (23%), Positives = 110/323 (34%), Gaps = 22/323 (6%) Query: 15 YRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYLYDP 74 Y++D +G + + + T Y YD RL Q Y YD Sbjct: 481 YQHDANGNIQQHRHSLWG---------TLDYQYDPLDRLTEERGGQGG-----RSYAYDA 526 Query: 75 LGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQ----PGS 130 +G R + P G + T Q + Sbjct: 527 VGNRTQRSDNPASGGTASSQDYQYAPDSNRLTAIGAQAVTSDAAGNLTQDRAARKLAYDA 586 Query: 131 FTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVS 190 L V ++A+ + +L + + E + ++ P Q+L E + ++ Sbjct: 587 QGRLQSVSLDGQQVAEYRYNALGQRIVKLTPESVTTYLYGPDG-QLLGEAEHDGSGRKLR 645 Query: 191 EESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDE 250 + WL S L + + H DH P G W + D Sbjct: 646 AQYYLWLDSLPLATIDADYDVQG-KVGNPTLLYLHGDHLDTPRLATDASGQIAWQWQSDA 704 Query: 251 WGNLLNEENPHQLQQLIRLPGQQYDEESGLYYNRHRYYDPLQGRYITQDPIGLKGGWNFY 310 +G +R PGQ YD ESGL+YN R YDP GRY+ DPIGLKGG N Y Sbjct: 705 FGRGEALSQGSTQVN-LRFPGQYYDAESGLHYNYFRDYDPETGRYVESDPIGLKGGLNTY 763 Query: 311 QYP-LNPVQYIDSMGLASKYGHL 332 Y NP+ Y D GL L Sbjct: 764 GYVYGNPLTYSDPKGLTPAAAGL 786 Score = 68.3 bits (165), Expect = 6e-10, Method: Composition-based stats. Identities = 29/251 (11%), Positives = 61/251 (24%), Gaps = 33/251 (13%) Query: 4 DNRIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAE 63 N + Y D G T + G + R ++ YD RL+ Sbjct: 153 GNNLGE--RLEYDVDTKGNRTAQRIKDASGSLV----RQQQWAYDELGRLLRA----VGA 202 Query: 64 PLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRK-------PQVTWYGWDGDRLTTIQ 116 + YD V + R+ + +L R T +D T Sbjct: 203 GGQTRSFAYDLNDNPVGETNPRQFAHSQAFDALDRLVGQSDPLGGKTQLAYDAQDNLTEV 262 Query: 117 NDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQM 176 D + T Y+ L R+ + + + + ++++ + + Sbjct: 263 KDPRGVTTRYEYDGLGNLTRLVSPDSGTTTFEHDAAGNVIRRTDARGTVT---EYRYDAL 319 Query: 177 LDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALV 236 +E +D + R+ + + + Sbjct: 320 NRLIERHSPSDPSLDVQYRYDLTADGNKGIGRLGAIEGARDSLVYRY------------- 366 Query: 237 STEGATEWCAE 247 G Sbjct: 367 DERGNLVEQVR 377 Score = 63.3 bits (152), Expect = 2e-08, Method: Composition-based stats. Identities = 45/276 (16%), Positives = 75/276 (27%), Gaps = 33/276 (11%) Query: 13 YLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYLY 72 + Y Y+ G L E+ D RTD + Y YDS+ L T + Y Sbjct: 30 WSYSYNALG-LIERAD-----GPRTDVQDVTLYAYDSRGNLTQVTNALGQVTRLG---DY 80 Query: 73 DPLGRRVAKRVWRRERDLTGWM-------SLSRKPQVTWYGWDGDRLTTIQNDRTRIQTI 125 D G+ + + S+S T + +D T Sbjct: 81 DERGKPGSITDANGVTSSLAYTGVDGWLASVSTAGSTTRFDYDAVGQITRVTRGDGSWLS 140 Query: 126 YQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEIL 185 Y+ L+ + GE + + + Q + GS+V D L + Sbjct: 141 YEYDDARRLVAIGNNLGERLEYDVDTKGNRTAQRIKDASGSLV--RQQQWAYDELGRLLR 198 Query: 186 ADRVSEESRRWLASCGLTVEQ--------------MQNQMDPVYTPARKIHLYHCDHRGL 231 A ++R + +++ P D + Sbjct: 199 AVGAGGQTRSFAYDLNDNPVGETNPRQFAHSQAFDALDRLVGQSDPLGGKTQLAYDAQDN 258 Query: 232 PLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLI 267 + G EYD GNL +P Sbjct: 259 LTEVKDPRG-VTTRYEYDGLGNLTRLVSPDSGTTTF 293 Score = 62.9 bits (151), Expect = 3e-08, Method: Composition-based stats. Identities = 38/300 (12%), Positives = 78/300 (26%), Gaps = 38/300 (12%) Query: 3 PDNRIARDAHYL-YRYDRHGRLTEKTDLIPE-------------GVIRTDDERTHRYHYD 48 D Y YD G LT+ T+ + + G I + T Y Sbjct: 43 ADGPRTDVQDVTLYAYDSRGNLTQVTNALGQVTRLGDYDERGKPGSITDANGVTSSLAYT 102 Query: 49 SQHRLVHYTRTQYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSL-------SRKPQ 101 V + +R+ YD +G+ + + + Sbjct: 103 G----VDGWLASVSTAGSTTRFDYDAVGQITRVTRGDGSWLSYEYDDARRLVAIGNNLGE 158 Query: 102 VTWYGWD--GDRLTTIQNDRTR---IQTIYQPGSFTPLIRVETATGELAKTQRRSLADTL 156 Y D G+R D + Q + L+R A G+ + + Sbjct: 159 RLEYDVDTKGNRTAQRIKDASGSLVRQQQWAYDELGRLLRAVGAGGQTRSFAYDLNDNPV 218 Query: 157 QQSGGEDGGSVVFPPVLVQMLDRLE-----SEILADRVSEESRRWLASCGLTVEQMQNQM 211 ++ L +++ + + +++ D + T + Sbjct: 219 GETNPRQFAHSQAFDALDRLVGQSDPLGGKTQLAYDAQDNLTEVKDPRGVTTRYEYDGLG 278 Query: 212 DPVY--TPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRL 269 + +P + D G + G YD L+ +P ++ Sbjct: 279 NLTRLVSPDSGTTTFEHDAAGNVIRRTDARGTVT-EYRYDALNRLIERHSPSDPSLDVQY 337 Score = 56.7 bits (135), Expect = 2e-06, Method: Composition-based stats. Identities = 38/283 (13%), Positives = 67/283 (23%), Gaps = 50/283 (17%) Query: 12 HYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQY---------- 61 +YRYD G L E+ I D T Y YD+ ++L+ Sbjct: 361 SLVYRYDERGNLVEQVRSIRLDQQTLLDRVT--YRYDAANQLLDIGYPSGLAIGYPRNAG 418 Query: 62 -------------AEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSR------KPQV 102 A + + Y P G + + + P Sbjct: 419 GQVASVTLAVGDKAPSPLVGQIAYLPFGPLLRLTWGNGITLSREYDQDYQLLRQKVGPWQ 478 Query: 103 TWYGWDGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGE 162 + Y D + YQ L E ++ + Q+S Sbjct: 479 SDYQHDANGNIQQHRHSLWGTLDYQYDPLDRLTE-ERGGQGGRSYAYDAVGNRTQRSDNP 537 Query: 163 DGGSVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIH 222 G D + + + + T R Sbjct: 538 ASGGTASSQDYQYAPDSNRLTAIG-----------------AQAVTSDAAGNLTQDRAAR 580 Query: 223 LYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQ 265 D +G ++ S +G Y+ G + + P + Sbjct: 581 KLAYDAQGRLQSV-SLDGQQVAEYRYNALGQRIVKLTPESVTT 622 Score = 46.3 bits (108), Expect = 0.003, Method: Composition-based stats. Identities = 30/198 (15%), Positives = 53/198 (26%), Gaps = 14/198 (7%) Query: 3 PDNRIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYA 62 N A YD GRL + D ++ Y Y++ + R Sbjct: 570 AGNLTQDRAARKLAYDAQGRLQSVS---------LDGQQVAEYRYNALGQ-----RIVKL 615 Query: 63 EPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRI 122 P + YLY P G+ + + + D D + + Sbjct: 616 TPESVTTYLYGPDGQLLGEAEHDGSGRKLRAQYYLWLDSLPLATIDADYDVQGKVGNPTL 675 Query: 123 QTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLES 182 ++ TP + + + + Q + S G ++ FP L Sbjct: 676 LYLHGDHLDTPRLATDASGQIAWQWQSDAFGRGEALSQGSTQVNLRFPGQYYDAESGLHY 735 Query: 183 EILADRVSEESRRWLASC 200 D E R + Sbjct: 736 NYFRDYDPETGRYVESDP 753 >UniRef50_A0LJM9 YD repeat protein n=3 Tax=Syntrophobacter fumaroxidans MPOB RepID=A0LJM9_SYNFM Length = 1433 Score = 199 bits (506), Expect = 2e-49, Method: Composition-based stats. Identities = 82/388 (21%), Positives = 130/388 (33%), Gaps = 41/388 (10%) Query: 16 RYDRHGRLTE--KTDLIPEGVIRTDDERTHR-------------YHYDSQHRLVHYTRTQ 60 YD +GRLT + + + + H Y YD+ RL R Q Sbjct: 984 EYDLNGRLTTANRGAPMQRDFTYYPNGQLHTVAGTASTPWVNRVYAYDTLDRLSLAERPQ 1043 Query: 61 YAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRK------PQVTWYGWDGDRLTT 114 + Y +D G R+ V + + + + + Q + +D + T Sbjct: 1044 -----LTKAYDFDSAGNRLHTIVDASVSETYAYAAGTNRLSAVAAAQGKTFDYDANGNTI 1098 Query: 115 IQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLV 174 + T ++ LI V L ++ G ++ Sbjct: 1099 LIASGT--NRVFTYNQENRLIGVAEDGNPLGTYVYNGFGQRAAKTAGGVATLYIYDFSGN 1156 Query: 175 QMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKI--HLYHCDHRGLP 232 + + + ++ + V + K+ + H D G P Sbjct: 1157 LVCE------AEGTGGGIQKEYIHHGRSRLAMADPGAGAVCSGNTKVCVYFTHNDLLGTP 1210 Query: 233 LALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEESGLYYNRHRYYDPLQ 292 + + W A YD +G + R PGQ YD E+GL+YN HRYYDP Sbjct: 1211 EFMTDSTNTAVWEAAYDAFGEATIHPAST-VVNNFRFPGQYYDAETGLHYNWHRYYDPKT 1269 Query: 293 GRYITQDPIGLKGGWNFYQYP-LNPVQYIDSMGLASKYGHLNNGGYGARPNKPPTPDPSK 351 GRY+T DPIGL GG N Y Y +P+ +ID GL +++ P + Sbjct: 1270 GRYMTPDPIGLAGGINPYTYAENDPINFIDLYGLWRFPDYVS---INFNIAIPTPWTATL 1326 Query: 352 LPDIAKQLRLPYPIDQASSAPNVFKTFF 379 L A+ Y A V K Sbjct: 1327 LGGTAQVALDRYGNFYAGPGGTVGKAAT 1354 Score = 61.0 bits (146), Expect = 9e-08, Method: Composition-based stats. Identities = 31/261 (11%), Positives = 64/261 (24%), Gaps = 16/261 (6%) Query: 22 RLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYLYDPLGR-RVA 80 R EK E Y++ +++ + + + YD ++ Sbjct: 519 RKIEKGYRKTVAGTVASYEYVTALTYNAGGQVLTIDGPRSGTGD-TTTFAYDATTNDLLS 577 Query: 81 KRVWRRERDLTGWMSLSRKP--------QVTWYGWDGD-RLTTIQNDRTRIQTIYQPGSF 131 + + P Q + +D R+ I N Sbjct: 578 VTRPLVGATVFSNFDAAGNPRKLTDVNAQEQTFVYDSRGRIKEIHNTADSSVRTVTYNVA 637 Query: 132 TPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSE 191 G + ++ +G V L ++ AD ++ Sbjct: 638 GLPATRTDEDGVNESHTYDNTYGQPRRVTDHEGNYVKTIFNAAGNLTSVQHLTAADEITR 697 Query: 192 ESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEW 251 E R W S + + + + D G ++V G YD + Sbjct: 698 E-RTWSYSGSDYPGLLFKEYEADGVTHTRTQY---DASGNVRSVVDPNGNQTD-YAYDAF 752 Query: 252 GNLLNEENPHQLQQLIRLPGQ 272 +++ P Q Sbjct: 753 NRVISITRPGNAVTHFEYDSQ 773 Score = 55.2 bits (131), Expect = 5e-06, Method: Composition-based stats. Identities = 35/311 (11%), Positives = 70/311 (22%), Gaps = 60/311 (19%) Query: 9 RDAHYLYRYDRHGRLTEKTDLIPE-------------GVIRTDDERTHRYHYDSQ-HRLV 54 + YD GR+ E + +D + YD+ + Sbjct: 604 NAQEQTFVYDSRGRIKEIHNTADSSVRTVTYNVAGLPATRTDEDGVNESHTYDNTYGQPR 663 Query: 55 HYTRTQYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQV------------ 102 T + ++ G + + ++T + S Sbjct: 664 RVTDHEGNYVKTI----FNAAGNLTSVQHLTAADEITRERTWSYSGSDYPGLLFKEYEAD 719 Query: 103 ----TWYGWDGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLA----- 153 T +D D QT Y +F +I + + + S Sbjct: 720 GVTHTRTQYDASGNVRSVVDPNGNQTDYAYDAFNRVISITRPGNAVTHFEYDSQGNLAKV 779 Query: 154 ----DTLQQSGGEDGGSVVF------------PPVLVQMLDRLESEILADRVSEESRRWL 197 + + R E I + + Sbjct: 780 VDPEGDPANPALGHTTTTTYDDMGNLIGVGSPDSGTTTYGYRPEGTIWWRIDARNIQTTY 839 Query: 198 ASCGLTVEQMQNQMDPVYTPARKIHLYH---CDHRGLPLALVSTEGATEWCAEYDEWGNL 254 ++ L + A + H + +G + G T YD G L Sbjct: 840 SNDALYRINQASYPAVGDLAAYTVTYSHDQRANGKGHLTTVTDPSGTTL--LNYDARGRL 897 Query: 255 LNEENPHQLQQ 265 +++ Q Sbjct: 898 KEKKSTVSGFQ 908 Score = 43.3 bits (100), Expect = 0.021, Method: Composition-based stats. Identities = 35/276 (12%), Positives = 69/276 (25%), Gaps = 33/276 (11%) Query: 7 IARDAHYLYRYDRHGRLTEKTDLIPE-----GVIRTDDERTHRYHYDSQHR--------- 52 L YD GRL EK + + R ++ Y R Sbjct: 881 TDPSGTTLLNYDARGRLKEKKSTVSGFQFTLSRTFSPAGRVNQLTY-PSGRTVTYSRAGC 939 Query: 53 ---LVHYTRTQYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDG 109 L + T AE + ++ TG + V+ Y +G Sbjct: 940 GCKLTGVSTTYGAESATT----------ILENLSYQPFGQATGMGWGNAGSVVSEYDLNG 989 Query: 110 DRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVV- 168 T + + Y P + +T + + D L + Sbjct: 990 RLTTANRGAPMQRDFTYYPNGQLHTVAGTASTPWVNRVYAYDTLDRLSLAERPQLTKAYD 1049 Query: 169 ---FPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYH 225 L ++D SE A +A+ + + + ++ Sbjct: 1050 FDSAGNRLHTIVDASVSETYAYAAGTNRLSAVAAAQGKTFDYDANGNTILIASGTNRVFT 1109 Query: 226 CDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPH 261 + + + +G Y+ +G + Sbjct: 1110 YNQENRLIGVA-EDGNPLGTYVYNGFGQRAAKTAGG 1144 >UniRef50_B3EU05 Putative uncharacterized protein n=1 Tax=Candidatus Amoebophilus asiaticus 5a2 RepID=B3EU05_AMOA5 Length = 2534 Score = 199 bits (506), Expect = 2e-49, Method: Composition-based stats. Identities = 77/505 (15%), Positives = 134/505 (26%), Gaps = 78/505 (15%) Query: 9 RDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERT--HRYHYDSQHRLVHYTRTQYAE--- 63 + Y YD G +T D V + + T Y YD+ +RLV T + Sbjct: 1881 PLQDWYYTYDPVGNITHIEDKNIPVVFFNNQKITGISSYTYDALYRLVEATGRENNAALT 1940 Query: 64 ------------------------PLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRK 99 RY YDP+G + + + T + Sbjct: 1941 FGSQDNWNDAPFKHQVNVGDPIAVRNYTQRYQYDPVGNILQMKHVACGNNWTRNYTYEAM 2000 Query: 100 PQVTWYGWDGDRLTTIQN-------------DRTRIQTIYQPGSFT-------------- 132 G ++ + N + Y + Sbjct: 2001 NNRLIRTQVGSQVCSEANLVECPEICSEVSLEVISGAYTYPHHAQHGYMIAMPHLEDMGW 2060 Query: 133 ----------PLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLES 182 R T E Q +++ + P + + Sbjct: 2061 NFKEEVVKTIRQRRTNGGTPETTYYQYDGQGQRIRKLTENQADAGAIPTKKEERIYIAGY 2120 Query: 183 EILADRVSEE-----SRRWLASCGLTVEQMQNQMD-PVYTPARKIHLYHCDHRGLPLALV 236 EI + + L G ++ + D T + +H G + Sbjct: 2121 EIYKKHSNTHAGLERTSLSLMDEGHRFVMIETRNDIDDGTEKHLVRYQLHNHLGSAALEL 2180 Query: 237 STEGATEWCAEYDEWGNLLNEENPHQLQQ---LIRLPGQQYDEESGLYYNRHRYYDPLQG 293 EY +G + N ++ R G + DEE+GL Y+ RYY P G Sbjct: 2181 DDSAQVISYEEYHPYGTTAYQANNAAIKAAAKRYRYTGMERDEETGLEYHSARYYVPWLG 2240 Query: 294 RYITQDPIGLKGGWNFYQYP-LNPVQYIDSMG-LASKYGHLNNGGYGARPNKPPTPDPSK 351 R+ + DPIG+ G N Y+Y NPV D G L + G + Sbjct: 2241 RWCSADPIGIGDGVNVYRYVGNNPVNLHDPTGALEFENYDAYKAYVGNKALSADKIGSQG 2300 Query: 352 LPDIAKQLRLPYPIDQASSAPNVFKTFFRALSPYDYTLYCRKWVKPNLTCTPQDDSQYPG 411 + + A++ K + + W + + ++++ G Sbjct: 2301 HWLKSDRENKTDVWSVANTFNLQQKDGNLQYTTITQRVAFYGWFQKQI-EAKGFETKWAG 2359 Query: 412 MDTKTASDYLPQTNWPTTQLPPGYT 436 A + L Sbjct: 2360 AAYIIAQQMSLMDDKLVASLTDDQI 2384 Score = 46.7 bits (109), Expect = 0.002, Method: Composition-based stats. Identities = 28/244 (11%), Positives = 65/244 (26%), Gaps = 41/244 (16%) Query: 2 WPD-NRIARDAHYLYRY----DRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHY 56 W D N Y + D GR+T +T + Y+ L++ Sbjct: 1772 WIDANLATDLEADSYDFTTETDALGRITRQTAPDGSIITP---------SYNEAG-LLNS 1821 Query: 57 TRTQYAEPLVESRY----LYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRL 112 +A P + + Y Y+ G+R + + + Sbjct: 1822 ESVTHANPALTTTYIKDIDYNEKGQRNKIIYGNDVTTKFYYDEETFRITRLE-------- 1873 Query: 113 TTIQNDRTRIQTIYQPGSFTPLIRVETAT-----------GELAKTQRRSLADTLQQSGG 161 + +N+ Y + +E ++ +L ++ +G Sbjct: 1874 SKRKNNDPLQDWYYTYDPVGNITHIEDKNIPVVFFNNQKITGISSYTYDALYRLVEATGR 1933 Query: 162 EDGGSVVFPPVLVQM---LDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPA 218 E+ ++ F + V ++R+ + QM++ Sbjct: 1934 ENNAALTFGSQDNWNDAPFKHQVNVGDPIAVRNYTQRYQYDPVGNILQMKHVACGNNWTR 1993 Query: 219 RKIH 222 + Sbjct: 1994 NYTY 1997 Score = 46.0 bits (107), Expect = 0.003, Method: Composition-based stats. Identities = 25/169 (14%), Positives = 50/169 (29%), Gaps = 15/169 (8%) Query: 27 TDLIPEGVIRTDDERTHRYHYDSQH-RLVH-YTRTQYAEPLVESRYLYDPLGRRVAKRVW 84 + I ++ T +++YD + R+ ++ + +PL + Y YDP+G Sbjct: 1842 NEKGQRNKIIYGNDVTTKFYYDEETFRITRLESKRKNNDPLQDWYYTYDPVGNITHIEDK 1901 Query: 85 RRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRT-------RIQTIYQPGSFTPLIRV 137 + ++ Y +D R Q + F + V Sbjct: 1902 NIPVVFFNNQKI---TGISSYTYDALYRLVEATGRENNAALTFGSQDNWNDAPFKHQVNV 1958 Query: 138 ETATG---ELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESE 183 + Q + + LQ G + M +RL Sbjct: 1959 GDPIAVRNYTQRYQYDPVGNILQMKHVACGNNWTRNYTYEAMNNRLIRT 2007 >UniRef50_C8QVK4 YD repeat protein n=4 Tax=Desulfurivibrio alkaliphilus AHT2 RepID=C8QVK4_9DELT Length = 2439 Score = 199 bits (506), Expect = 2e-49, Method: Composition-based stats. Identities = 72/337 (21%), Positives = 108/337 (32%), Gaps = 35/337 (10%) Query: 12 HYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYL 71 + D+ GR+TEKT+ I Y YD RL+ T+ Y Sbjct: 2009 STSFSRDQRGRITEKTETIAGTTTTFG------YLYDEAGRLIRVTQD-----GAIVEYT 2057 Query: 72 YDPLGRRVAKRVWRRERDLTGWMS---LSRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQP 128 YD G R+ + + Y +G+ L Q + Y Sbjct: 2058 YDQNGNRLQHSAGGTTITGSYEAQDRMTAYGNATYQYTANGELLRKTQGTQVTS---YTY 2114 Query: 129 GSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADR 188 L V G + + + D+L D Sbjct: 2115 DVLGNLKAVNLPDGRNIEYIIDGSNRRIGKKIDG------VLVQGFLYQDQLNPVAELDA 2168 Query: 189 VSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVS-TEGATEWCAE 247 + R++ + V + DH G P +V+ + G + Sbjct: 2169 NGQVISRFIYASRANVPDY-------LIKNGTTYRIITDHLGSPRLVVNTSTGEIAQRID 2221 Query: 248 YDEWGNLLNEENPHQLQQLIRLPGQQYDEESGLYYNRHRYYDPLQGRYITQDPIGLKGG- 306 YDE+GN+L + NP Q G +D ++ L R YDP GR+ +DPI GG Sbjct: 2222 YDEFGNVLQDTNPGF--QPFGFAGGLHDRDTNLTRFGARDYDPQTGRWTAKDPILFAGGD 2279 Query: 307 WNFYQYP-LNPVQYIDSMGLASKYGHLNNGGYGARPN 342 N Y Y +P+ +ID G G G GA Sbjct: 2280 TNLYGYVLNDPINWIDPEGKIGIAGAAVGGVIGAVSG 2316 Score = 64.1 bits (154), Expect = 1e-08, Method: Composition-based stats. Identities = 39/263 (14%), Positives = 62/263 (23%), Gaps = 42/263 (15%) Query: 3 PDNRIARDA-----HYLYRYDRHGRLTEKTDLIP---------------EGVIRTDDERT 42 + RI++ Y YD GRL+ I Sbjct: 1715 ANGRISQSRPAGLLEVGYHYDLRGRLSSIAQGDGAQGRYLDFTYDSQGYPAAISDGLGVL 1774 Query: 43 HRYHYDSQHRLVHYTRTQYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQV 102 Y YD R+ Q E RY YD G A R L + + R+ + Sbjct: 1775 AAYEYDLAGRVT----RQELADGREIRYGYDANGNLTAITPPGRSPHLFTYTATDRQQE- 1829 Query: 103 TWYGWDGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGE 162 T Y L ++ G+ + L Sbjct: 1830 ---------YLPPAAGAQPAATRYAYNLDGELTQITRPDGQTLELGYSGCCGKLAYLDLP 1880 Query: 163 DGG-SVVFPPVLVQMLDRLESE-----ILADRVSEESRRWLASCGLTVEQMQNQ--MDPV 214 G + ++ E D ++ W +V + + Sbjct: 1881 HGRIDYSYHSATGRLSGITTPENNTLAFTYDGFLPLTQSWTGEINGSVARGYDNNFQLQS 1940 Query: 215 YTPARKIHLYHCDHRGLPLALVS 237 + Y D GLP+ Sbjct: 1941 LNVNGQTITYGYDSDGLPIQAGD 1963 Score = 58.7 bits (140), Expect = 5e-07, Method: Composition-based stats. Identities = 41/298 (13%), Positives = 68/298 (22%), Gaps = 51/298 (17%) Query: 7 IARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLV 66 +A Y YD +G LT T H + Y + R Y Sbjct: 1790 LADGREIRYGYDANGNLTAIT---------PPGRSPHLFTYTATDRQQEYLPPAAGAQPA 1840 Query: 67 ESRYLYDPLGRRVAKRVWRRER----------------------DLTGWMSLSRKPQVTW 104 +RY Y+ G + D + + R +T Sbjct: 1841 ATRYAYNLDGELTQITRPDGQTLELGYSGCCGKLAYLDLPHGRIDYSYHSATGRLSGITT 1900 Query: 105 -------YGWDGDR-LTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTL 156 + +DG LT + L + G+ S + Sbjct: 1901 PENNTLAFTYDGFLPLTQSWTGEINGSVARGYDNNFQL-QSLNVNGQTITYGYDSDGLPI 1959 Query: 157 QQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYT 216 Q + L + + + E + + + D Sbjct: 1960 QAGDLTLARDPANGFLTGTSLAGVATTQAYNGFGEMTAFSASHDATELFSTSFSRDQRGR 2019 Query: 217 PARK---------IHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQ 265 K Y D G + + +GA YD+ GN L Sbjct: 2020 ITEKTETIAGTTTTFGYLYDEAGRLIRVT-QDGAIV-EYTYDQNGNRLQHSAGGTTIT 2075 Score = 50.6 bits (119), Expect = 1e-04, Method: Composition-based stats. Identities = 30/244 (12%), Positives = 60/244 (24%), Gaps = 31/244 (12%) Query: 5 NRIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEP 64 +R+ + Y+Y +G L KT + Y YD L Sbjct: 2082 DRMTAYGNATYQYTANGELLRKTQ----------GTQVTSYTYDVLGNLKAVNLPDGRN- 2130 Query: 65 LVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQT 124 Y+ D RR+ K++ + + V +G + + Sbjct: 2131 ---IEYIIDGSNRRIGKKIDGVLVQGFLYQ--DQLNPVAELDANG---------QVISRF 2176 Query: 125 IYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEI 184 IY + P ++ T T + + + + +L Sbjct: 2177 IYASRANVPDYLIKNGTTYRIITDHLGSPRLVVNTSTGEIAQRIDYDEFGNVLQDTNPGF 2236 Query: 185 LADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCD------HRGLPLALVST 238 + + + + +T I D P+ + Sbjct: 2237 QPFGFAGGLHDRDTNLTRFGARDYDPQTGRWTAKDPILFAGGDTNLYGYVLNDPINWIDP 2296 Query: 239 EGAT 242 EG Sbjct: 2297 EGKI 2300 Score = 46.0 bits (107), Expect = 0.004, Method: Composition-based stats. Identities = 32/216 (14%), Positives = 55/216 (25%), Gaps = 19/216 (8%) Query: 12 HYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYL 71 Y + GR D + + + YD Q RLV L+E Sbjct: 1426 DEYYVFTPSGRHLRTLDSLTGTTRK-------TFSYDEQGRLVRLEDGDGNATLIER--- 1475 Query: 72 YDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQND-------RTRIQT 124 + G A +R + VT + RL + T + Sbjct: 1476 -NSDGDPTAIIAPDGQRTELALDANGYLASVTNPAGEAYRLAHTPSGLLTKVIKPTGAKY 1534 Query: 125 IYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEI 184 Y + L G T R+ T + + ++ Sbjct: 1535 TYNYNAVGRLTHTNDPDGGGW-TIARTKTGTGTGGRMTSAEGRTWSFDVDRLSKTELLRT 1593 Query: 185 LADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARK 220 + S R + + + ++ N D RK Sbjct: 1594 STNPDGAVSTRRITTTDSEITEVANTADGTVRTLRK 1629 >UniRef50_Q399U9 Rhs family protein n=3 Tax=Proteobacteria RepID=Q399U9_BURS3 Length = 1446 Score = 199 bits (505), Expect = 2e-49, Method: Composition-based stats. Identities = 88/472 (18%), Positives = 139/472 (29%), Gaps = 68/472 (14%) Query: 14 LYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYLYD 73 ++YD G + +K DL T Y YD+ R+ + + +D Sbjct: 993 QWQYDAAGDVIQKRDLRYG---------TTSYRYDATGRIEQAAGPGLPSEV----FRWD 1039 Query: 74 PLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQPGSFTP 133 V+ + + + Y G + + + + + + Sbjct: 1040 AAANLVSSDHPGGFVEHNRLKMF--EDKRFEYDVYGRLVRKLSGHGPAKELVLEYDDWNQ 1097 Query: 134 LIRVETATG---ELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVS 190 L V T + + +++ G + RL E DR Sbjct: 1098 LKTVVTKDRLGVGTTHFEYDAFGRRIRKLNGG-----YASTDFLWDGMRLVQETYHDRQG 1152 Query: 191 EESRRWLASCGLTVEQMQNQMDPVYTPARK----IHLYHCDHRGLPLALVSTEGATEWCA 246 EE+ +L V + V ++ +H D GLP L + EG W A Sbjct: 1153 EEALTYLYESNSYVPLARIDQGKVAANDANARDAVYYFHNDVSGLPEELTNAEGELIWQA 1212 Query: 247 EYDEWGNLLNEENPHQL-----------------------QQLIRLPGQQYDEESGLYYN 283 Y WGN + EE + Q +R GQ D E+GL+YN Sbjct: 1213 RYKVWGNAVQEEWIARTSQQSVPEWGEVQLASATPAHVPRPQNLRFQGQYLDRETGLHYN 1272 Query: 284 RHRYYDPLQGRYITQDPIGLKGGWNFYQYPLNPVQYIDSMGLASKYGHLNNGGYGAR--- 340 R+YDP GR+I DPIGL GG N Y Y +P+ +ID G + Sbjct: 1273 TFRFYDPDIGRFINPDPIGLSGGHNLYAYAESPLIWIDPWGWCRRGNQATKNHMDGVRDQ 1332 Query: 341 -----PNKPPTPDPSKLPDIAKQLRLPYPIDQASSAPNVFKTFFRALSPYDYTLY----- 390 P ++ P + T +Y Sbjct: 1333 YLADNPTDRHVAGGRNALTGGERPETYLPPLSGNGRKGSSYTDMTFTDSQGNPVYIQTVD 1392 Query: 391 ---CRKWVKPNLTCTPQDDSQYPGMDTKTA--SDYLPQTNWPTTQLPPGYTC 437 + T + Q P T L + T + PG Sbjct: 1393 KGSVNGMSQREWTNANRITQQDPSAIVITVVKGSTLQPGDLNTATMTPGTVT 1444 Score = 70.6 bits (171), Expect = 1e-10, Method: Composition-based stats. Identities = 41/280 (14%), Positives = 75/280 (26%), Gaps = 37/280 (13%) Query: 10 DAHYLYRYDRHGRLTEKTDLIPEGVIRTDDE-------------RTHRYHYDSQHRLVHY 56 + YD GR T++ D + + + Y YD L Sbjct: 579 GNTTRFEYDERGRQTQRIDALGQVERTEWNGYYDLPVAETDPANSRWIYRYDDLGNLTMT 638 Query: 57 TRTQYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSR-------KPQVTWYGWDG 109 + Y D G R R W ++ +VT + +D Sbjct: 639 RDPAG----FATEYHRDERGLVHTIRDARGGYKFLEWNGRAQLTSYTDCSGKVTRFAYDA 694 Query: 110 DRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGED-GGSVV 168 D T+Y+ + + + TA G ++ Sbjct: 695 RGALARVTDAAGQSTVYETDAMGRVTGIGTADGARQAFFYDVAGRLIEVVDANQRSTRYE 754 Query: 169 FPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKI------H 222 P + + + + +++ R + E + Q D A +I Sbjct: 755 LNPRGLLLSRTDAANRVVRFGYDDAFRLASLTNENRESYRFQYDRRDLVAEQIGLDGHKR 814 Query: 223 LYHCD--HRGLPLALVSTEGATEWCAEYDEWGNLLNEENP 260 Y D +G + +G E E D G L ++ Sbjct: 815 AYEYDVCGQGTIVR----DGKIETRYERDAIGRLTAKQAT 850 Score = 63.7 bits (153), Expect = 2e-08, Method: Composition-based stats. Identities = 38/289 (13%), Positives = 64/289 (22%), Gaps = 39/289 (13%) Query: 13 YLYRYDRHGRLTEKTDLIPEGVIR------------TDDERTHRYHYDSQHRLVHYTRTQ 60 Y Y G L TD R Y + R R Sbjct: 453 VRYAYSNAGELVAVTDRSGHIGRRFAYEHGLMVQHTLRGGLQCFYAWQGVGRDARVVRHW 512 Query: 61 YAEPLVESRYLY------------DPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWD 108 + Y + D +GR W D + V W+ Sbjct: 513 TNDG---EAYTFNADLAQRSVTITDQIGRVTR---WTWNEDQQPTSHTDAEGHVWQLEWN 566 Query: 109 GDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVV 168 R D T ++ + A G++ +T+ D + Sbjct: 567 AKRQLVSTTDPAGNTTRFEYDERGRQTQRIDALGQVERTEWNGYYDLPVAETDPANSRWI 626 Query: 169 FPPV------LVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPA--RK 220 + + + +E D A G + + K Sbjct: 627 YRYDDLGNLTMTRDPAGFATEYHRDERGLVHTIRDARGGYKFLEWNGRAQLTSYTDCSGK 686 Query: 221 IHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRL 269 + + D RG + G + E D G + +Q Sbjct: 687 VTRFAYDARGALARVTDAAGQST-VYETDAMGRVTGIGTADGARQAFFY 734 Score = 58.3 bits (139), Expect = 6e-07, Method: Composition-based stats. Identities = 44/302 (14%), Positives = 75/302 (24%), Gaps = 61/302 (20%) Query: 15 YRYDRHGRLTEKTD---------------------------------LIPEGVIRTDDER 41 YRYD G LT D + Sbjct: 627 YRYDDLGNLTMTRDPAGFATEYHRDERGLVHTIRDARGGYKFLEWNGRAQLTSYTDCSGK 686 Query: 42 THRYHYDSQHRLVHYTRTQYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQ 101 R+ YD++ L T + E+ D +GR R + R + Sbjct: 687 VTRFAYDARGALARVTDAAGQSTVYET----DAMGRVTGIGTADGARQAFFYDVAGRLIE 742 Query: 102 V-------TWYGWDGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLAD 154 V T Y + L + D + L + E + Q D Sbjct: 743 VVDANQRSTRYELNPRGLLLSRTDAANRVVRFGYDDAFRLASLTNENRESYRFQYD-RRD 801 Query: 155 TLQQSGGEDGGSVVFPPVL-------------VQMLDRLESEILADRVSEESRRWLASCG 201 + + G DG + + + + A + + E +L Sbjct: 802 LVAEQIGLDGHKRAYEYDVCGQGTIVRDGKIETRYERDAIGRLTAKQATHERCEYLYDKA 861 Query: 202 LTVEQMQNQMDPVYTPARKIHLYH-CDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENP 260 + + + K + RG L + G YDE GN ++ Sbjct: 862 SRIASAELYTLAARGSSLKNRVSLKYGARGEVLEEYTPTGWLA--HTYDELGNRVSTTIS 919 Query: 261 HQ 262 + Sbjct: 920 GE 921 Score = 57.1 bits (136), Expect = 1e-06, Method: Composition-based stats. Identities = 50/270 (18%), Positives = 73/270 (27%), Gaps = 34/270 (12%) Query: 7 IARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDD------------ERTHRYHYDSQHRLV 54 A A + YD GRL E D + R R+ YD RL Sbjct: 724 TADGARQAFFYDVAGRLIEVVDANQRSTRYELNPRGLLLSRTDAANRVVRFGYDDAFRLA 783 Query: 55 HYTRTQYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQV------TWYGWD 108 T R+ YD + + + + V T Y D Sbjct: 784 SLTNENRES----YRFQYDRRDLVAEQIGLDGHKRAYEYDVCGQGTIVRDGKIETRYERD 839 Query: 109 GD-RLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSV 167 RLT Q R + +Y S + T + + R + GE Sbjct: 840 AIGRLTAKQATHERCEYLYDKASRIASAELYTLAARGSSLKNRVSLKYGAR--GEVLEEY 897 Query: 168 VFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCD 227 L D L + + E + WL V Q++ V R D Sbjct: 898 TPTGWLAHTYDELGNRVSTTISGERTIDWLHYGSGHVHQIRVDGAAVADIERD------D 951 Query: 228 HRGLPLALVSTEGATEWCAEYDEWGNLLNE 257 ++ T+G YD G + Sbjct: 952 LH---REVLRTQGKLTSHFGYDAVGRRARQ 978 >UniRef50_C4DNE3 Putative uncharacterized protein n=1 Tax=Stackebrandtia nassauensis DSM 44728 RepID=C4DNE3_9ACTO Length = 714 Score = 199 bits (505), Expect = 2e-49, Method: Composition-based stats. Identities = 73/476 (15%), Positives = 132/476 (27%), Gaps = 43/476 (9%) Query: 7 IARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHR--YHYDSQHRLVHYTRTQYAEP 64 + + YD G +T D V + Y +D+ +RLV T + Sbjct: 23 LTALQDLTHTYDPIGNITHIADAAQSTVFNGNQRVESSADYTFDATYRLVEATGREQIGA 82 Query: 65 LVE--------SRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWD--GDRLTT 114 + R+ YD +G ++ W + +GW R + + G+RL+ Sbjct: 83 ADDGEALGRYLRRFGYDQVGNLLSMTHWATDPAKSGWTRRYRYDEASLLEPGVPGNRLSA 142 Query: 115 IQNDRTRIQTIYQPGSFTPLI--------------------RVETATGELAKTQRRSLAD 154 I ++ + R + + + Sbjct: 143 ITDNGPTTPQRFSYDEHGNTTAMPELPSLRWDFKDRLRSTARRDDNDLATTFYVYDANGN 202 Query: 155 TLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPV 214 +++ G + L + E + + ++ + + Sbjct: 203 RVRKVTEHHGSRLSERVYLGPFEIHRRHRANGELTLERQTLHILDGEQRIALVERRTEGD 262 Query: 215 YTPARK-IHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQL--IRLPG 271 + D G + EY +G E + + R G Sbjct: 263 DEGLERLTRFQLADQIGSSTLELDDSARIISHEEYYPYGGTAVESVRSRTETPKRYRFTG 322 Query: 272 QQYDEESGLYYNRHRYYDPLQGRYITQDPIGLKGGWNFYQYP-LNPVQYIDSMGLASKYG 330 ++ DEESGLYY+ RYY P GR+ + DP G+ G N Y Y NP+ + D G ++ Sbjct: 323 KERDEESGLYYHGARYYAPGLGRWTSGDPKGIAEGPNPYVYTRNNPIVFADPDGREARLI 382 Query: 331 HLNNGGYGARPNKPPTPDPSKLPDIAKQLRLPYPIDQASSAPNVFKTFFRALSPYDYTLY 390 + A + A + A T Sbjct: 383 INPVKHTVTVRTTVHLYAATDAERTALREVAKK-------AEAYWANPTVATESEVNTAV 435 Query: 391 CRKWVKPNLTCTPQDDSQYPGMDTKTASDYLPQTNWPTTQLPPGYTCAEPYLFPDI 446 K PN ++Q ++ P G+ E D Sbjct: 436 AAKTSIPNRGTGATINNQQWTLNYDIKYQVHDSPTAPIKIDKSGFVVDEKQAAADK 491 >UniRef50_B8FBZ2 YD repeat protein n=1 Tax=Desulfatibacillum alkenivorans AK-01 RepID=B8FBZ2_DESAA Length = 685 Score = 198 bits (503), Expect = 4e-49, Method: Composition-based stats. Identities = 76/332 (22%), Positives = 115/332 (34%), Gaps = 33/332 (9%) Query: 8 ARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVE 67 A Y D+ G +T + Y YD RL+ ++ Sbjct: 51 NVFASNEYTLDKSGNVTNRISHNDSIG----------YAYDDLGRLIS----HVSQSSGT 96 Query: 68 SRYLYDPLGRRVAKRVWRRERDLTGWMS---LSRKPQVTWYGWDGDRLTTIQNDRTRIQT 124 + YD + + T + LS Y +G ++ +N+ T Sbjct: 97 ETFTYDEVANIATALENGQPITFTRNANNELLSYGDATFQYDENGAVISRTENNETV--- 153 Query: 125 IYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEI 184 Y +IRVE +G + + F + + + Sbjct: 154 NYFYDVDGRMIRVENGSGGVIAEYCYDPFGRRLWKEVNGTRTCYFYSDEGLIGEFTSTGT 213 Query: 185 LADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEW 244 L G + M + + YH D G P LV G+T W Sbjct: 214 LIKSY-----------GYKPDSMWSSNPLFMVQDGVYYYYHNDRIGAPQVLVRANGSTAW 262 Query: 245 CAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEESGLYYNRHRYYDPLQGRYITQDPIGLK 304 A Y +G + + ++ +R PGQ YD E+GL+YN +RYYDP G Y + DP+GL Sbjct: 263 SATYSAYGKASVDPDSD-VENNLRFPGQYYDAETGLHYNLNRYYDPEIGAYRSPDPLGLG 321 Query: 305 GGWNFYQY-PLNPVQYIDSMGLASKYGHLNNG 335 GG N Y Y NP Y+D +GL G Sbjct: 322 GGVNLYAYTAGNPANYVDPLGLLFSSMDNPTG 353 Score = 63.3 bits (152), Expect = 2e-08, Method: Composition-based stats. Identities = 39/274 (14%), Positives = 71/274 (25%), Gaps = 49/274 (17%) Query: 3 PDNRIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYA 62 +N + ++YD +G + +T+ + T Y YD R++ + Sbjct: 123 ANNELLSYGDATFQYDENGAVISRTE----------NNETVNYFYDVDGRMIRV---ENG 169 Query: 63 EPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRI 122 V + Y YDP GRR+ K V T Y + + L + Sbjct: 170 SGGVIAEYCYDPFGRRLWKEVNGT---------------RTCYFYSDEGLIGEFTSTGTL 214 Query: 123 --QTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRL 180 Y+P S + + Q +G + + Sbjct: 215 IKSYGYKPDSMWSSNPLFMVQDGVYYYYHNDRIGAPQVLVRANGSTAWSATYSAYGKASV 274 Query: 181 ESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEG 240 + + + ++ + + DP D GL G Sbjct: 275 DPDSDVENNLRFPGQYYDAETGLHYNLNRYYDPEIGA-----YRSPDPLGL--------G 321 Query: 241 ATEWCAEYDEWGNLLNEENP-----HQLQQLIRL 269 Y GN N +P + Sbjct: 322 GGVNLYAYTA-GNPANYVDPLGLLFSSMDNPTGY 354 >UniRef50_C8QGI4 YD repeat protein n=1 Tax=Pantoea sp. At-9b RepID=C8QGI4_9ENTR Length = 465 Score = 198 bits (502), Expect = 5e-49, Method: Composition-based stats. Identities = 79/412 (19%), Positives = 126/412 (30%), Gaps = 40/412 (9%) Query: 16 RYDRHGRLTEKTDLIPEGVIRTDDERTHR----------------------YHYDSQHRL 53 YD GR + L+ GV + + R Y YD++ RL Sbjct: 13 EYDSSGRRILQRSLLSTGVTLPEQDILSRAFRYTARDELAGVSDTLRGEIQYGYDAEGRL 72 Query: 54 VHYTRTQYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLT 113 + + + + YD + + +T + Y G+ L Sbjct: 73 LK--HYEARQGHRSDAFRYDLADNLLPEDDGLPAPPVTDNRLGQWQNLFMEYDGWGN-LI 129 Query: 114 TIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVL 173 + Y + R G + Sbjct: 130 RRRRGTEEQHYAYDAENRLISARGTGPEGAFEARYHWDALGRRTRKIV-TTARGTEETRF 188 Query: 174 VQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPL 233 + RL E + ++ + + I + D G PL Sbjct: 189 LWQGWRLLQEQQENGA---CSTYVYDPAEEWSPLARIDHRQHEAQGDILWFSTDLNGAPL 245 Query: 234 ALVSTEGATEWCAEYDEWGNLLNEEN--------PHQLQQLIRLPGQQYDEESGLYYNRH 285 + G W +Y +G + + + Q +R GQ D E+GL+YN Sbjct: 246 EVTDASGKLRWSGQYGSFGEVTRQTDGVYRRASQTSLSHQPLRYAGQYADAETGLHYNLF 305 Query: 286 RYYDPLQGRYITQDPIGLKGGWNFYQYPLNPVQYIDSMGLASKYGHLNNGGYGARPNKPP 345 RYYDP GR+ QDPIGL GGWN YQY NP+ +ID GL+ G + G+ P Sbjct: 306 RYYDPQTGRFTVQDPIGLAGGWNLYQYAPNPLTWIDPTGLSRYPGVDFS---GSDALYPD 362 Query: 346 TPDPSKLPDIAKQLRLPYPIDQASSAPNVFKTFFRALSPYDYTLYCRKWVKP 397 K+ + ++ + N P +YT + P Sbjct: 363 GESIVKIQMTGSRYGDFKAANEIAGYANASGNITGKSHPENYTGHHLNDYDP 414 >UniRef50_Q30CR7 LipX3 n=4 Tax=Streptomyces RepID=Q30CR7_STRAU Length = 1560 Score = 198 bits (502), Expect = 5e-49, Method: Composition-based stats. Identities = 73/326 (22%), Positives = 101/326 (30%), Gaps = 37/326 (11%) Query: 10 DAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESR 69 H Y YD G L E +L+ + R+ D RL E R Sbjct: 1084 LQHRTYEYDPDGALREIDELL---------GESRRFDVDPVGRLTAVRTADR-----EER 1129 Query: 70 YLYDPLGRRVAKRVWRRERD---LTGWMSLSRKPQVTWYGWDGDRLTTIQN----DRTRI 122 Y YD G V + + + + T Y +DG + R Sbjct: 1130 YGYDRAGNLVTSSPYDGTAEPRPHHVDGTRLHRAGRTTYAYDGQGRLIRKTVRLLSGGRR 1189 Query: 123 QTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLES 182 + Y + L+R G + + + GG V+ RL Sbjct: 1190 TSQYGWSAEDRLVRTVAPDGSEWRYTYDPDGRRVGKQRLGTGGDVLEETTFSWDGTRLAE 1249 Query: 183 EILADRVSEESRRWLASCGLTVEQMQ------------NQMDPVYTPARKIHLYHCDHRG 230 +I D W + G Q + + D G Sbjct: 1250 QIETDGT---VTTWDYAPGSYRPVAQTVSGGRERPAVNRGGSDPGDTDARFYAIVTDLVG 1306 Query: 231 LPLALVSTEGATEWCAEYDEWGNLLNEENPHQ-LQQLIRLPGQQYDEESGLYYNRHRYYD 289 P LVS +G W + WG P +R PGQ D E+G YN RYYD Sbjct: 1307 TPTELVSADGRIVWHRRFTAWGQPTGTPTPGPEADCPLRFPGQYADAETGWNYNYFRYYD 1366 Query: 290 PLQGRYITQDPIGLKGGWNFYQYPLN 315 P RY++ DP+GL N Y Y N Sbjct: 1367 PETARYVSADPLGLAPDPNDYAYVTN 1392 Score = 85.2 bits (209), Expect = 4e-15, Method: Composition-based stats. Identities = 46/273 (16%), Positives = 68/273 (24%), Gaps = 29/273 (10%) Query: 13 YLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYLY 72 Y YD G L +D R R YD++ R+ +T RY Y Sbjct: 553 RRYGYDAEGNLRAVSD---------GQGRDFRLTYDAESRITSWTDRNGG----WYRYTY 599 Query: 73 DPLGRRVAKRVW--------RRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQT 124 D R A R + + + T Y +D D T Sbjct: 600 DERHRVTAGRGADGFLDCSLTYDDAARVNTYRNSLGRTTTYRFDERLQLVQVTDPLGAST 659 Query: 125 IYQPGSFTPLIRVETATGELAKTQRRSLADTL---QQSGGEDGGSVVFPPVLVQMLDRLE 181 + L+ G + + + + ++ D Sbjct: 660 HREWDENGRLVAWTDPLGRTTRQVFDAAGHLIEVVRPDLSSVRAEYDEAGRTRRLTDPDG 719 Query: 182 S--EILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPA--RKIHLYHCDHRGLPLALVS 237 S D S T + P+ D GLPLAL Sbjct: 720 SFWSYTYDDRGNRLTVTDPSGATTRHRYDALGRPLSVTDALGHTRHIETDPAGLPLALTD 779 Query: 238 TEGATEWCAEYDEWGNLLNEENPHQLQQLIRLP 270 EG T A D +G + +P Sbjct: 780 PEGRTT-RARRDSFGRVTAVTDPTGATDRFGWT 811 Score = 76.0 bits (185), Expect = 3e-12, Method: Composition-based stats. Identities = 36/304 (11%), Positives = 63/304 (20%), Gaps = 47/304 (15%) Query: 4 DNRIARD----AHYLYRYDRHGRLTEKTDLIPEG------------VIRTDDERTHRYHY 47 NR+ A +RYD GR TD + + + RT R Sbjct: 730 GNRLTVTDPSGATTRHRYDALGRPLSVTDALGHTRHIETDPAGLPLALTDPEGRTTRARR 789 Query: 48 DSQHRLVHYTRTQYAEP-----------------LVESRYLYDPLGRRVAKRVWRRERDL 90 DS R+ T A + +D G + Sbjct: 790 DSFGRVTAVTDPTGATDRFGWTVEGLASWRSFPDGATEAWSWDGEGNLASHTARNGAVTT 849 Query: 91 TGWMSLSR-------KPQVTWYGWDGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGE 143 + + + + +D + T ++ Y L+R G Sbjct: 850 YEFTHFHQPTSRTTPDGRRYTFAYDTELNLTGVHNADGRTWEYAYDDANRLMRETDFNGR 909 Query: 144 LAKTQRRSLADTLQQSGGEDGGSVVF----PPVLVQMLDRLESEILADRVSEESRRWLAS 199 + + G + V + D R Sbjct: 910 TLTYTHDAAGQRTSWTNGAGQTTDVTVDLLGRPRQYRTADEVTTYEYDSAGSLLRAANRD 969 Query: 200 CGLTVEQMQNQMDPVYTPARKIHLYHCDHRG-LPLALVSTEGATEWCAEYDEWGNLLNEE 258 + T + Y D G + Y+ G+ Sbjct: 970 TTVERTYDSMGRTLTETVNGRTTTYTYDALGRRISRRTPSS--ITSTWTYEATGHPQTLS 1027 Query: 259 NPHQ 262 Sbjct: 1028 GTGS 1031 Score = 71.4 bits (173), Expect = 8e-11, Method: Composition-based stats. Identities = 42/254 (16%), Positives = 69/254 (27%), Gaps = 41/254 (16%) Query: 7 IARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLV 66 Y + YD LT + D RT Y YD +RL+ T Sbjct: 863 TPDGRRYTFAYDTELNLTGVHNA---------DGRTWEYAYDDANRLMRETDFNG----R 909 Query: 67 ESRYLYDPLGRRVAKRVWRRERDLTGWMSLSR------KPQVTWYGWD--------GDRL 112 Y +D G+R + + L R +VT Y +D +R Sbjct: 910 TLTYTHDAAGQRTSWTNGAGQTTDVTVDLLGRPRQYRTADEVTTYEYDSAGSLLRAANRD 969 Query: 113 TTIQND-----------RTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGG 161 TT++ T Y + I T + + + SG Sbjct: 970 TTVERTYDSMGRTLTETVNGRTTTYTYDALGRRISRRTPSSITSTWTYEATGHPQTLSGT 1029 Query: 162 EDGGSVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKI 221 + ++ L +E + + + S R G +V + Sbjct: 1030 GSRLRFDYDTAHREIRRTLGAEAVLHQSWDGSGR---LTGQSVTTPGRAGGDAGGELLQH 1086 Query: 222 HLYHCDHRGLPLAL 235 Y D G + Sbjct: 1087 RTYEYDPDGALREI 1100 Score = 69.5 bits (168), Expect = 3e-10, Method: Composition-based stats. Identities = 63/464 (13%), Positives = 108/464 (23%), Gaps = 81/464 (17%) Query: 29 LIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYLYDPLGRRVAKRVWRRER 88 +P + + + YD + + V + GR + V Sbjct: 484 TLPLTAMSDRNGHRIDFLYDEAGVVAEMRHSGGYRVAVATE-----DGRVTSLSVLSSPE 538 Query: 89 DLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQ 148 D G + S V YG+D + +D + + + G + Sbjct: 539 DGYGVEADSPWAVVRRYGYDAEGNLRAVSDGQGRDFRLTYDAESRITSWTDRNGGWYRYT 598 Query: 149 RRSLADTLQQSGGE---------------DGGSVVFPPVLVQMLDRLES--EILADRVSE 191 G + + D ++ + Sbjct: 599 YDERHRVTAGRGADGFLDCSLTYDDAARVNTYRNSLGRTTTYRFDERLQLVQVTDPLGAS 658 Query: 192 ESRRWLASCGLTVEQMQNQMDPVYTPARKIHLY------------HCDHRGLPLALVSTE 239 R W + L HL D G L + Sbjct: 659 THREWDENGRLVAWTDPLGRTTRQVFDAAGHLIEVVRPDLSSVRAEYDEAGRTRRLTDPD 718 Query: 240 GATEWCAEYDEWGNLLNEENPHQLQQLIRL--PGQQYDEESGLYYNRHRYYDPLQGRYIT 297 G+ W YD+ GN L +P R G+ L + RH I Sbjct: 719 GS-FWSYTYDDRGNRLTVTDPSGATTRHRYDALGRPLSVTDALGHTRH----------IE 767 Query: 298 QDPIGLKGGWNFYQYPLNPVQYIDSMGLASKYGHLNNGGYGARPNK-------------- 343 DP GL P+ D G ++ + G A + Sbjct: 768 TDPAGL------------PLALTDPEGRTTRARRDSFGRVTAVTDPTGATDRFGWTVEGL 815 Query: 344 ------PPTPDPSKLPDIAKQLRLPYPIDQASSAPNV--FKTFFRALSPYDYTLYCRKWV 395 P + D L + A + F +P Sbjct: 816 ASWRSFPDGATEAWSWDGEGNLASHTARNGAVTTYEFTHFHQPTSRTTPDGRRYTFAYDT 875 Query: 396 KPNLTCTPQDDSQYPGMDTKTASDYLPQTNWPTTQLPPGYTCAE 439 + NLT D + A+ + +T++ L + A Sbjct: 876 ELNLTGVHNADGRTWEYAYDDANRLMRETDFNGRTLTYTHDAAG 919 >UniRef50_Q6XP55 TcYF3 n=1 Tax=Yersinia frederiksenii RepID=Q6XP55_YERFR Length = 978 Score = 198 bits (502), Expect = 5e-49, Method: Composition-based stats. Identities = 58/359 (16%), Positives = 103/359 (28%), Gaps = 46/359 (12%) Query: 10 DAHYLYRYDRHGRLTEKTDLIPEGVIRTDDER--THRYHYDSQHRLVHYTRTQYAEPLVE 67 Y YD G + + + + + + Y YDS ++L+ T + + Sbjct: 322 LQQLRYEYDPVGNVLQVNNDAEASRYWRNQKVLPGNSYAYDSLYQLITATGREMVNIGQQ 381 Query: 68 ----------------------SRYLYDPLGRRVAKRVWR--RERDLTGWMSLSRKPQVT 103 Y YD G R + T +++S + Sbjct: 382 GTSRPPAFIPLPTDNNTYTTYTRSYSYDRGGNLTQIRHSAPASGNNYTTNITVSSRSNRA 441 Query: 104 W--------------YGWDGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQR 149 + G + + T L+ + + + Sbjct: 442 VLNTLTSESSMVDALFDAGGHQNQLQPGQNLTWTPQGELLKVT-LVERNGQSSDYESYRY 500 Query: 150 RSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQN 209 S + + + G+ + + + L +E + + Sbjct: 501 DSASQRVTKINTLQSGNNSKIQHTLYLSGLEQRITLQGDTVKEVLHVVTTNNAVRMLHWE 560 Query: 210 QMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLI-- 267 P ++ + + G V EG EY +G Q + Sbjct: 561 DGKPGDIDNDQLRYSYDNLVGSIGLEVDAEGNIISLEEYYPYGGTAIWAARSQTEANYKT 620 Query: 268 -RLPGQQYDEESGLYYNRHRYYDPLQGRYITQDPIGLKGGWNFYQYP-LNPVQYIDSMG 324 R GQ+ D +GLYY RYY P GR+++ DP G G N Y+ NPV D G Sbjct: 621 LRYSGQEQDA-TGLYYYGFRYYQPWIGRWLSADPAGYVDGINLYRMVGNNPVNSNDIAG 678 >UniRef50_B2TKH9 YD repeat protein n=1 Tax=Clostridium botulinum B str. Eklund 17B RepID=B2TKH9_CLOBB Length = 2634 Score = 197 bits (501), Expect = 6e-49, Method: Composition-based stats. Identities = 71/369 (19%), Positives = 133/369 (36%), Gaps = 34/369 (9%) Query: 12 HYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYL 71 Y Y YD +G +K + + Y YDS +RLV + + Sbjct: 2112 DYKYAYDLNGSRLQKVS----------SKHKNFYSYDSMNRLVGSSYDDRC-----ESFT 2156 Query: 72 YDPLGRRVAKRVWRRERDLTGWM-----SLSRKPQVTWYGWDGDRLTTIQNDRTRIQTIY 126 YD +G R++K + L K V ++ +D T I+ + T I+ Sbjct: 2157 YDKVGNRLSKTTNDITEKYVYNVKNQLKELHNKNGVNYFTYDKQGNT-IKEETTTGNNIF 2215 Query: 127 QPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILA 186 + + ++ T G ++ + + E +F + + Sbjct: 2216 EYNTLNQAVKAITKEGNTLVSRYDTEDLRTEIEENEKLSKFIFNKNGDIL-------VET 2268 Query: 187 DRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWCA 246 D + ++ + ++ ++ + + + Y D +G ++ Sbjct: 2269 DSDNNVISKFTRGYEIVAAEIADKTNSSINYSLSRYYYCVDEQGSTAFIIDENQKVRNEY 2328 Query: 247 EYDEWGNLLNEENPHQLQQLIRLPGQQYDEESGLYYNRHRYYDPLQGRYITQDPIGLKGG 306 YD +GN+L ++ ++ I GQQ+D + YY R RYY+P+ GR+ +D + G Sbjct: 2329 YYDAFGNVL--DSREEVHNRITYTGQQFDGITQQYYLRARYYNPVIGRFTQED-VYRGDG 2385 Query: 307 WNFYQYP-LNPVQYIDSMGLASKY--GHLNNGGYGARPNKPPTPDPSKLPDIAKQLRLPY 363 N Y Y NPV+Y D G + NN + D +KL + + Sbjct: 2386 LNLYAYCGNNPVRYYDPSGYIKDWVTPKNNNDLLNIYSSNMSQADKNKLLGVDIIEVEKF 2445 Query: 364 PIDQASSAP 372 I+ P Sbjct: 2446 DIENFIKNP 2454 Score = 71.0 bits (172), Expect = 1e-10, Method: Composition-based stats. Identities = 45/306 (14%), Positives = 83/306 (27%), Gaps = 47/306 (15%) Query: 6 RIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYA--- 62 R L+ YD G L EK I G +T Y YDS R+ Sbjct: 1099 RDNLGKEILFTYDNKGNLLEKKTKISVGEY-----KTESYTYDSYGRITAKVDGNGNISN 1153 Query: 63 ----------------------EPLVESRYLYDPLGRRVA-KRVWRRERDLTGWMSL--- 96 + Y YD +GR + + + Sbjct: 1154 YEYDSGSFIEGKKGKDPVRVITNSGYDYEYEYDEVGRNTSISTDYGTIEFGYNNLDYVSK 1213 Query: 97 --SRKPQVTWYGWDGDRLTTI--------QNDRTRIQTIYQPGSFTPLIRVETATGELAK 146 VT +D N + Y+ LI ++ G + K Sbjct: 1214 IKDGNGNVTLKYYDKMGNLISIYTPNACLNNKQNGQGYYYKYDHMDRLISIKNPLGIIDK 1273 Query: 147 TQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESE--ILADRVSEESRRWLASCGLTV 204 + R S + +++ + ++ + ++ R + + G + Sbjct: 1274 SIRDSEGNIIKEINPNYYDDKTDNGLGIEHVYDKDNRKIKTIYLDGGIERFYYDANGNVI 1333 Query: 205 EQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWC-AEYDEWGNLLNEENPHQL 263 + + T Y D ++ + E EYD GN++ E + + Sbjct: 1334 RHISPEYYNKETDNGTGFSYTYDSMNKLTSIYNEETGITEKTFEYDLHGNIIKEIDNDKN 1393 Query: 264 QQLIRL 269 L + Sbjct: 1394 ATLFKY 1399 Score = 69.8 bits (169), Expect = 2e-10, Method: Composition-based stats. Identities = 41/315 (13%), Positives = 81/315 (25%), Gaps = 53/315 (16%) Query: 8 ARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVE 67 + YD+ RL E D RY YD + ++ + Sbjct: 1464 NNYNEIYFTYDKENRLIEVKDKCGAKA---------RYKYDCLNNKIYESFKINDTTNKI 1514 Query: 68 SRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTI------------ 115 Y+YD +G + K+ + ++ +T Y +D + T Sbjct: 1515 IHYVYDKVGNLIEKKEEIDGKFISSKNKGKNIWSITKYEYDKNGNLTKIITPKGYEIVKV 1574 Query: 116 --------------QNDRTRIQTIYQPGSFTPLIRVETATGELAK-----------TQRR 150 + + +Y +I + +GE AK Sbjct: 1575 YDEIDRIIEEHEKDETNNIFRSRVYAYDKANNIISINEYSGEEAKLINSKYSSEFNYDLD 1634 Query: 151 SLADTLQQSGGED-----GGSVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVE 205 L + E + + + +R + ++ Sbjct: 1635 ILKRYENKKENEKLLKELDFKIDKRKKNYTYDSQNRLTHFTNVSGNTARLFYDKNDRIIK 1694 Query: 206 QMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQ 265 Q+ + Y + +G + + + G T YD GNL + + Sbjct: 1695 QVLPKQYDETKDNGVGTTYKYNIKGQVVEVKNALGETVTKNTYDPKGNLKTSVDGENNKV 1754 Query: 266 LIRLP--GQQYDEES 278 GQ D + Sbjct: 1755 EYTYTLLGQIKDVVT 1769 Score = 69.1 bits (167), Expect = 3e-10, Method: Composition-based stats. Identities = 43/288 (14%), Positives = 83/288 (28%), Gaps = 41/288 (14%) Query: 15 YRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYLYDP 74 Y YD L + D + + ++ + YD++ L+ Y YD Sbjct: 1087 YVYDEEQNLLNERDNLGKEIL---------FTYDNKGNLLEKKTKISVGEYKTESYTYDS 1137 Query: 75 LGRRVAKRVWRRERDLTGWMS---------------LSRKPQVTWYGWDG-DRLTTIQND 118 GR AK + S ++ Y +D R T+I D Sbjct: 1138 YGRITAKVDGNGNISNYEYDSGSFIEGKKGKDPVRVITNSGYDYEYEYDEVGRNTSISTD 1197 Query: 119 RTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQM-- 176 I + + + +++ G + + + + + Sbjct: 1198 YGTI--EFGYNNLDYVSKIKDGNGNVTLKYYDKMGNLISIYTPNACLNNKQNGQGYYYKY 1255 Query: 177 --LDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLA 234 +DRL S + ++S R + D H+Y D+R + Sbjct: 1256 DHMDRLISIKNPLGIIDKSIRDSEGNIIKEINPNYYDDKTDNGLGIEHVYDKDNRKIKTI 1315 Query: 235 LVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEESGLYY 282 + YD GN++ +P ++ D +G Y Sbjct: 1316 YLDGG---IERFYYDANGNVIRHISPE-------YYNKETDNGTGFSY 1353 Score = 62.9 bits (151), Expect = 3e-08, Method: Composition-based stats. Identities = 23/150 (15%), Positives = 34/150 (22%), Gaps = 17/150 (11%) Query: 16 RYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYA-EPLVESRYLYDP 74 YD G L D V Y Y ++ E + Y YD Sbjct: 1736 TYDPKGNLKTSVDGENNKVE---------YTYTLLGQIKDVVTPNSKKEERLAQSYKYDA 1786 Query: 75 LGRRVAKRVWRRERDLTGWMSLSRKPQVTW-------YGWDGDRLTTIQNDRTRIQTIYQ 127 G R Q+T Y +D T D Y Sbjct: 1787 RGNITGITDGNGNETSYLLDDWGRIIQITTPEGGIEKYTYDYAANITSTTDANGGIIEYF 1846 Query: 128 PGSFTPLIRVETATGELAKTQRRSLADTLQ 157 S + ++ G + ++ Sbjct: 1847 YNSLGQVCEIKDQEGNSEYFYYDEEGNLIK 1876 Score = 61.4 bits (147), Expect = 7e-08, Method: Composition-based stats. Identities = 45/312 (14%), Positives = 79/312 (25%), Gaps = 66/312 (21%) Query: 10 DAHYLYRYDRHGRLTEKTDLIPEGVIRTD------------------------------- 38 +Y YD+ + + E + Sbjct: 1594 FRSRVYAYDKANNIISINEYSGEEAKLINSKYSSEFNYDLDILKRYENKKENEKLLKELD 1653 Query: 39 ---DERTHRYHYDSQHRLVHYTRTQYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMS 95 D+R Y YDSQ+RL H+T +R YD R + K+V ++ D T Sbjct: 1654 FKIDKRKKNYTYDSQNRLTHFTNVSGN----TARLFYDKNDRII-KQVLPKQYDETKDNG 1708 Query: 96 LSR-----------------KPQVTWYGWDGDRLTTIQNDRTRIQTIYQPGSFTPLIRVE 138 + VT +D D + Y + V Sbjct: 1709 VGTTYKYNIKGQVVEVKNALGETVTKNTYDPKGNLKTSVDGENNKVEYTYTLLGQIKDVV 1768 Query: 139 TATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSEESRRWLA 198 T + + +S + + + +I E + Sbjct: 1769 TPNSKKEERLAQSYKYDARGNITGITDGNGNETSYLLDDWGRIIQITTPEGGIEKYTYDY 1828 Query: 199 SCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEE 258 + +T N Y + G + EG YDE GNL+ Sbjct: 1829 AANITSTTDANGGIIE---------YFYNSLGQVCEIKDQEGN-SEYFYYDEEGNLIKHI 1878 Query: 259 NPHQLQQLIRLP 270 + ++ + Sbjct: 1879 DRNENIVNRKYN 1890 Score = 50.6 bits (119), Expect = 1e-04, Method: Composition-based stats. Identities = 26/178 (14%), Positives = 52/178 (29%), Gaps = 32/178 (17%) Query: 5 NRIARDAHYLYRYDRHGRLTEKTDLIPE--------------------GVIRTDDERTHR 44 N Y Y+YD RL + + +TD+ Sbjct: 1243 NNKQNGQGYYYKYDHMDRLISIKNPLGIIDKSIRDSEGNIIKEINPNYYDDKTDNGLGIE 1302 Query: 45 YHYDSQHRLVHYTRTQYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTW 104 + YD +R + R+ YD G + T + Sbjct: 1303 HVYDKDNRKIKTIYLDGG----IERFYYDANGNVIRHISPEYYNKETDNGTG------FS 1352 Query: 105 YGWDG-DRLTTIQNDRTRIQ-TIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSG 160 Y +D ++LT+I N+ T I ++ +I+ + + ++++ Sbjct: 1353 YTYDSMNKLTSIYNEETGITEKTFEYDLHGNIIKEIDNDKNATLFKYDLANNLIEKNV 1410 Score = 48.3 bits (113), Expect = 6e-04, Method: Composition-based stats. Identities = 18/165 (10%), Positives = 46/165 (27%), Gaps = 6/165 (3%) Query: 64 PLVESRYLYDPLGRRVAKRVWRRERDLTGWMS----LSRKPQVT--WYGWDGDRLTTIQN 117 ++ R+ Y+P G + T T Y +D + Sbjct: 1978 NVINQRFKYNPDGTLNNAYTGNMMYNYTYNDEKLLESKSASGRTLISYTYDKNNNIKSIK 2037 Query: 118 DRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQML 177 D T +IY + + + + D ++ +G + + Sbjct: 2038 DITGKSSIYSYDNANRVKTIVDDNQNTLASYDYYQNDNIKTVTLGNGIKSDYTYDGDGNV 2097 Query: 178 DRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIH 222 + L + V + + G ++++ ++ Y+ Sbjct: 2098 ESLVTITSTGEVLVDYKYAYDLNGSRLQKVSSKHKNFYSYDSMNR 2142 Score = 46.7 bits (109), Expect = 0.002, Method: Composition-based stats. Identities = 26/302 (8%), Positives = 65/302 (21%), Gaps = 42/302 (13%) Query: 8 ARDAHYLYRYDRHGRLTEKTDLIPE------------GVIRTDDERTHRYHYDSQHRLVH 55 Y D GR+ + T + Y Y+S ++ Sbjct: 1796 GNGNETSYLLDDWGRIIQITTPEGGIEKYTYDYAANITSTTDANGGIIEYFYNSLGQVCE 1855 Query: 56 YTRTQYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRL--- 112 + + YD G + + V Y D + Sbjct: 1856 IKDQEGNS----EYFYYDEEGNLIKHIDRNENIVNRKYNIDRNIVSVEAYKLDNKAIENE 1911 Query: 113 ---------TTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGED 163 +++ + + ++ L R E + + + + Sbjct: 1912 KILLKNSETLSLEQGKPKRSRDFRKRVLENLERKEKGLENSYPYKTENNINNNSNDEVNE 1971 Query: 164 GGSVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQM------------ 211 + + + + + + +E Sbjct: 1972 YEKYKLNVINQRFKYNPDGTLNNAYTGNMMYNYTYNDEKLLESKSASGRTLISYTYDKNN 2031 Query: 212 --DPVYTPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRL 269 + K +Y D+ +V T +Y + N+ + ++ Sbjct: 2032 NIKSIKDITGKSSIYSYDNANRVKTIVDDNQNTLASYDYYQNDNIKTVTLGNGIKSDYTY 2091 Query: 270 PG 271 G Sbjct: 2092 DG 2093 Score = 46.0 bits (107), Expect = 0.003, Method: Composition-based stats. Identities = 26/276 (9%), Positives = 67/276 (24%), Gaps = 50/276 (18%) Query: 2 WPDNRIARD-----AHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHY 56 + N + Y Y+ G + TD + + +D + R++ Sbjct: 941 YNGNYLTEVIHVDQGITRYTYNEEGFIDSITDQNGQTYTKNF--------FDKKGRVIRQ 992 Query: 57 TRTQYAEPLVESRYLYDPL----------GRRVAKRVWRRERDLTGWMSLSRKPQVTWYG 106 ++ YD + +R K + ++ +T + Y Sbjct: 993 DFPNNDNCVI----TYDDINKEVSFYYEQSKRTEKTRFNKDGLITHLFYEDGTTEEFKYD 1048 Query: 107 WDGDRLTTIQNDR-------------------TRIQTIYQPGSFTPLIRVETATGELAKT 147 ++ + + Y L+ G+ Sbjct: 1049 EYENKNYIKDRNGFETFKLFNEYGSLLKETLSNGLVKEYVYDEEQNLLNERDNLGKEILF 1108 Query: 148 QRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQM 207 + + L++ G R+ +++ + + G +E Sbjct: 1109 TYDNKGNLLEKKTKISVGEYKTESYTYDSYGRITAKVDGNG---NISNYEYDSGSFIEGK 1165 Query: 208 QNQMDPVYTPARKIHL-YHCDHRGLPLALVSTEGAT 242 + + Y D G ++ + G Sbjct: 1166 KGKDPVRVITNSGYDYEYEYDEVGRNTSISTDYGTI 1201 >UniRef50_C9RZN2 YD repeat protein n=2 Tax=Geobacillus RepID=C9RZN2_GEOSY Length = 678 Score = 197 bits (501), Expect = 6e-49, Method: Composition-based stats. Identities = 68/321 (21%), Positives = 105/321 (32%), Gaps = 40/321 (12%) Query: 14 LYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYLYD 73 YRYD +G TE T Y YD+ +LV Y YD Sbjct: 275 TYRYDENGNRTEI---------ATPTGAKTLYRYDALDQLVEEQWPDG----TTIAYTYD 321 Query: 74 PLGRRVAKRVWRRERDLTGWMSLSRKPQVTWY-----GWDGDRLTTIQNDRTRIQTIYQP 128 G R + + T + Q+ + +D + Q Y+ Sbjct: 322 GFGNRKQIVKTKDGQSTTTTADYNAANQLVRFGDETITYDANGNRVEDG-----QYRYEW 376 Query: 129 GSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADR 188 L+ + + D + +G + D L D Sbjct: 377 NEADQLVSITRKGESTPFVTYQYDEDGRRIQKNVNGVITNYHYQ----GDSLNVLYETDA 432 Query: 189 VSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWCAEY 248 R ++ + M+ + YH + G +AL +G +Y Sbjct: 433 SGNVVRSYIYGENGQLLAMK--------KGNATYFYHYNTHGDVIALTDEQGNIVARYQY 484 Query: 249 DEWGNLLNEENPHQLQQLIRLPGQQYDEESGLYYNRHRYYDPLQGRYITQDPI-GLKGGW 307 D GN+L++ + R G QYD+E+GLYY RYY P G +++ DP G Sbjct: 485 DARGNILSQSGALADENPYRYAGYQYDQETGLYYLIARYYHPEHGVFLSLDPDPGDADDL 544 Query: 308 ---NFYQYP-LNPVQYIDSMG 324 N Y Y NPV ++D G Sbjct: 545 LTQNGYAYANNNPVMFVDPDG 565 Score = 67.9 bits (164), Expect = 7e-10, Method: Composition-based stats. Identities = 39/248 (15%), Positives = 73/248 (29%), Gaps = 38/248 (15%) Query: 3 PDNRIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYA 62 N++ R YD +G E + +RY ++ +LV TR + Sbjct: 346 AANQLVRFGDETITYDANGNRVE--------------DGQYRYEWNEADQLVSITRKGES 391 Query: 63 EPLVESRYLYDPLGRRVAKRVWRRERDLTG----------WMSLSRKPQVTWYGWDGDRL 112 P V Y YD GRR+ K V + + + YG +G L Sbjct: 392 TPFVT--YQYDEDGRRIQKNVNGVITNYHYQGDSLNVLYETDASGNVVRSYIYGENGQLL 449 Query: 113 TTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPV 172 + + T Y + +I + G + + + G + Sbjct: 450 AMKKGNAT---YFYHYNTHGDVIALTDEQGNIVARYQYDARGNILSQSGALADENPYRYA 506 Query: 173 LVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLP 232 Q + +R + G+ + + D + + Y + P Sbjct: 507 GYQY------DQETGLYYLIARYYHPEHGVFLSLDPDPGDADDLLTQNGYAYANN---NP 557 Query: 233 LALVSTEG 240 + V +G Sbjct: 558 VMFVDPDG 565 Score = 64.8 bits (156), Expect = 7e-09, Method: Composition-based stats. Identities = 39/296 (13%), Positives = 75/296 (25%), Gaps = 54/296 (18%) Query: 7 IARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLV 66 + + Y YD RL + + + + Y YD + Sbjct: 25 VKKGNQKEYTYDLSDRLKQ---------LLLANGTSVNYDYDVNGNMTSKVIRTSDGQSQ 75 Query: 67 ESRYLYDPLGRRVAKRVWRRERDLTGWMSLSR--------KPQVTWYGWDGDRLTTIQND 118 Y YD G+ + K V T + K + +DG + Sbjct: 76 TFAYSYDAAGK-LMKTVGPLHDVTTNEYDANGNKIKTVLPKGNTIQWTYDGTERVKTISY 134 Query: 119 RTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLD 178 ++ + V+ KT++ A+ + + G + D Sbjct: 135 NNVPYYEFRYDQNGNELSVQYVKDGTTKTRKFDSANRVIEQSDRGG---LQKWTYPTTSD 191 Query: 179 RLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVST 238 +L+ + + ++ + + + V + + D RG + Sbjct: 192 KLQQFMFSHGSFSQTVTYQYN--------ALDQNTVVQDGTYTYRFDYDERGNVRTFTTG 243 Query: 239 EGA-------------------------TEWCAEYDEWGNLLNEENPHQLQQLIRL 269 GA YDE GN P + L R Sbjct: 244 NGAGSTFTYDDRGLVESVSVGTADGTEIVSETYRYDENGNRTEIATPTGAKTLYRY 299 Score = 56.0 bits (133), Expect = 3e-06, Method: Composition-based stats. Identities = 33/256 (12%), Positives = 64/256 (25%), Gaps = 49/256 (19%) Query: 8 ARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDD------------ERTHRYHYDSQHRLVH 55 + + Y YD G+L + + + D T ++ YD R+ Sbjct: 72 GQSQTFAYSYDAAGKLMKTVGPLHDVTTNEYDANGNKIKTVLPKGNTIQWTYDGTERVKT 131 Query: 56 YTRTQYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRK---------------- 99 + + YD G ++ + + T + + Sbjct: 132 ISYNNVPY----YEFRYDQNGNELSVQYVKDGTTKTRKFDSANRVIEQSDRGGLQKWTYP 187 Query: 100 ----------------PQVTWYGWDGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGE 143 Q Y ++ T+ D T + + T G Sbjct: 188 TTSDKLQQFMFSHGSFSQTVTYQYNALDQNTVVQDGT-YTYRFDYDERGNVRTFTTGNGA 246 Query: 144 LAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLT 203 + S G G+ + + +EI ++ R+ A L Sbjct: 247 GSTFTYDDRGLVESVSVGTADGTEIVSETYRYDENGNRTEIATPTGAKTLYRYDALDQLV 306 Query: 204 VEQMQNQMDPVYTPAR 219 EQ + YT Sbjct: 307 EEQWPDGTTIAYTYDG 322 >UniRef50_C7HJS3 YD repeat protein (Fragment) n=3 Tax=Clostridium thermocellum DSM 2360 RepID=C7HJS3_CLOTM Length = 783 Score = 197 bits (500), Expect = 8e-49, Method: Composition-based stats. Identities = 79/388 (20%), Positives = 135/388 (34%), Gaps = 49/388 (12%) Query: 13 YLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYLY 72 Y Y YD +G +++ ++++ Y YD+ +RL ++ R++Y Sbjct: 229 YRYAYDGNGN----------QILKEENDKVTAYSYDALNRLKEVAYP----GSIKERFIY 274 Query: 73 DPLGRRVAKRVWRRERDLTGWMSLSRKPQV------TWYGWDGDRLTTIQNDRTRIQTIY 126 D G R+ KR + + + S +R Q T Y +D + + + +Y Sbjct: 275 DANGNRL-KREYGDIFEQYEYDSCNRLIQRIKNGLLTEYEYDARGNLIKEKEG-ELTKLY 332 Query: 127 QPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILA 186 F LIRV+ G + + V+ + Sbjct: 333 SYDGFDRLIRVQNPDGTYMENIYDAENLRTVSIENGRYNRYVYNGRNI------------ 380 Query: 187 DRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWCA 246 E W + Q + + Y + G AL +G Sbjct: 381 --ACEVDEDWSLKDRIVFGHTILQREDSDKNE---YYYIHNAHGDITALTDGKGEVINSY 435 Query: 247 EYDEWGNLLNEENPHQLQQLIRLPGQQYDEESGLYYNRHRYYDPLQGRYITQDPIGLKGG 306 YD +GN+L ++ +++ + G+ D +G YY R RYY+P GR++ +D G Sbjct: 436 SYDAFGNIL--DSVEKIENRFKYSGEMLDPVTGQYYLRARYYNPSIGRFMQEDTFR-GDG 492 Query: 307 WNFYQYP-LNPVQYIDSMGLASKYGHLNNGGYG-----ARPNKPPTPDPSKLPDIAKQLR 360 N Y Y NP++YID G + + R S L D + Sbjct: 493 LNLYTYVANNPIKYIDPTGHCKENAAIAYQVENILRRLRRNPIISLSKVSILLDYLIEGL 552 Query: 361 LPYPID-QASSAPNVFKTFFRALSPYDY 387 P+D A+S P V + A Y Sbjct: 553 SYNPVDHTATSGPTVMEAALIAKHVYSG 580 Score = 73.3 bits (178), Expect = 2e-11, Method: Composition-based stats. Identities = 41/287 (14%), Positives = 75/287 (26%), Gaps = 49/287 (17%) Query: 9 RDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVES 68 + Y YD G L TD + T RY Y+S + L + Sbjct: 11 DGTNIKYDYDYAGNLVSTTD---------GNGNTTRYTYNSLNLLSEIIDPDG----RKI 57 Query: 69 RYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTW-------YGWDGDRLTTIQNDRTR 121 + YD GR V + + + + Y ++ D T Sbjct: 58 TFKYDRQGRMVQRIGKDGRSTYYNYNADNNITGRWEEEGQMEKYEYNVDGSLAASISGTT 117 Query: 122 IQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLE 181 I T Y L T ++ + + + G V + ++ L + Sbjct: 118 IHT-YAYTLAGRLKSKTTNGQKVLEYDYNKNG-LISRLPDISGTPVEYTYDVLGRLTTVT 175 Query: 182 SEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKI-------------------H 222 + + S R+ + T+ Q+ + + Sbjct: 176 N------GGKVSARYEYNIDNTIAQVLYGSGVCARYEYNLDKMITRLLNIDPTGKEMFAY 229 Query: 223 LYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRL 269 Y D G ++ E YD L P +++ Sbjct: 230 RYAYDGNGN--QILKEENDKVTAYSYDALNRLKEVAYPGSIKERFIY 274 Score = 72.9 bits (177), Expect = 2e-11, Method: Composition-based stats. Identities = 48/286 (16%), Positives = 85/286 (29%), Gaps = 37/286 (12%) Query: 2 WPDNRI----ARDAHYLYRY----------DRHGR-LTEKTDLIPEGVIRTD-DERTHRY 45 + N + Y Y D GR +T K D V R D R+ Y Sbjct: 21 YAGNLVSTTDGNGNTTRYTYNSLNLLSEIIDPDGRKITFKYDRQGRMVQRIGKDGRSTYY 80 Query: 46 HYDSQHRLVHYTRTQYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVT-- 103 +Y++ + + + +Y Y+ G A ++ K + T Sbjct: 81 NYNADNNITGRWEEEG----QMEKYEYNVDGSLAASISGTTIHTYAYTLAGRLKSKTTNG 136 Query: 104 ----WYGWDGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQS 159 Y ++ + L + D + Y L V A+ + ++ +T+ Q Sbjct: 137 QKVLEYDYNKNGLISRLPDISGTPVEYTYDVLGRLTTVTNGGKVSARYEY-NIDNTIAQV 195 Query: 160 GGEDGGSVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPAR 219 G + L +M+ RL I + R+ + Sbjct: 196 LYGSGVCARYEYNLDKMITRLL-NIDPTGKEMFAYRYAYDGN--------GNQILKEEND 246 Query: 220 KIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQ 265 K+ Y D + G+ + YD GN L E +Q Sbjct: 247 KVTAYSYDALNRLKEVAYP-GSIKERFIYDANGNRLKREYGDIFEQ 291 Score = 66.0 bits (159), Expect = 3e-09, Method: Composition-based stats. Identities = 38/224 (16%), Positives = 60/224 (26%), Gaps = 17/224 (7%) Query: 105 YGWDGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDG 164 Y +D D T Y S L + G + +Q+ G + Sbjct: 17 YDYDYAGNLVSTTDGNGNTTRYTYNSLNLLSEIIDPDGRKITFKYDRQGRMVQRIGKDGR 76 Query: 165 GSVVFPPVLVQMLDRLESEILADRVSEESRRWLASC------GLTVEQMQNQMDPVYTPA 218 + + R E E ++ LA+ + ++ T Sbjct: 77 STYYNYNADNNITGRWEEEGQMEKYEYNVDGSLAASISGTTIHTYAYTLAGRLKSKTTNG 136 Query: 219 RKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEES 278 +K+ Y + GL L G YD G L N ++ D Sbjct: 137 QKVLEYDYNKNGLISRLPDISGTPV-EYTYDVLGRLTTVTNGGKVSARYEYN---IDNTI 192 Query: 279 GLYYNR----HRY-YDPL--QGRYITQDPIGLKGGWNFYQYPLN 315 RY Y+ R + DP G + Y Y N Sbjct: 193 AQVLYGSGVCARYEYNLDKMITRLLNIDPTGKEMFAYRYAYDGN 236 Score = 44.8 bits (104), Expect = 0.006, Method: Composition-based stats. Identities = 32/242 (13%), Positives = 68/242 (28%), Gaps = 38/242 (15%) Query: 6 RIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPL 65 RI Y YD G L + + E T Y YD RL+ Sbjct: 303 RIKNGLLTEYEYDARGNLIK----------EKEGELTKLYSYDGFDRLIRVQNPDGTYME 352 Query: 66 VESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWD-GDRLTTIQN-----DR 119 YD + + + + +V W DR+ D Sbjct: 353 NI----YDAE-NLRTVSIENGRYNRYVYNGRNIACEVDE-DWSLKDRIVFGHTILQREDS 406 Query: 120 TRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDR 179 + + Y + + + GE+ + + S + + ++ Sbjct: 407 DKNEYYYIHNAHGDITALTDGKGEVINSYSYDAFGNILDSVEKIENRFKYSGEML----- 461 Query: 180 LESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTE 239 + + + +R + S G +++ + D + ++ Y + P+ + Sbjct: 462 ---DPVTGQYYLRARYYNPSIGRFMQEDTFRGDGLN-----LYTYVAN---NPIKYIDPT 510 Query: 240 GA 241 G Sbjct: 511 GH 512 >UniRef50_B8DCN9 Wall-associated protein n=14 Tax=Bacillales RepID=B8DCN9_LISMH Length = 2198 Score = 197 bits (500), Expect = 9e-49, Method: Composition-based stats. Identities = 74/393 (18%), Positives = 109/393 (27%), Gaps = 59/393 (15%) Query: 8 ARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVE 67 + Y YD T + + Y YD+ ++L T Sbjct: 1764 TQILDENYTYDAASNRTSIDNK---------QDGKTTYEYDAVNQLTKETLPDG----TV 1810 Query: 68 SRYLYDPLGRRVAKRVWRRER------DLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTR 121 Y YD G R + E G +S + Y +G+R + Sbjct: 1811 KAYTYDGFGNRTQVAISGSETKTIAASYNDGNQLVSWNGEALTYDANGNR-------TSD 1863 Query: 122 IQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLE 181 + Y + L + T D + S DG + + D ++ Sbjct: 1864 GKYTYTWDTGDRLSSITKKGESEPFTSYTYDDDNRRLSKTVDGVTTNYHYD----GDSID 1919 Query: 182 SEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGA 241 D + R+++ S M+ K YH + G +AL G Sbjct: 1920 VLYETDGDGKVVRQYVYSDDNVRLAMK--------MNGKTLYYHYNAHGDVIALTDEAGK 1971 Query: 242 TEWCAEYDEWGNLLNEENP--HQLQQLIRLPGQQYDEESGLYYNRHRYYDPLQGRYIT-- 297 YD WGN+L G YD+E YY RYY+P QG + Sbjct: 1972 IVAEYAYDAWGNVLKNTASTEEAKANPYGYAGYTYDKEIEQYYLMARYYEPEQGVFTAYD 2031 Query: 298 --QDPIGLKGGWNFYQYP-LNPVQYIDSMGLASKYGHLNNGGYGARPNKPPTPDPSKLPD 354 N Y Y NPV D G + GG + Sbjct: 2032 PDPGDEDDPQTMNGYNYANNNPVMMFDPDGNMPWWAAATIGG--------------AIGG 2077 Query: 355 IAKQLRLPYPIDQASSAPNVFKTFFRALSPYDY 387 AK + S+ K FR Y Sbjct: 2078 AAKYYITNKIRGKKSTWKGAGKAAFRGGRDALY 2110 Score = 66.0 bits (159), Expect = 3e-09, Method: Composition-based stats. Identities = 33/271 (12%), Positives = 67/271 (24%), Gaps = 27/271 (9%) Query: 9 RDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVES 68 + YD +G T +TD YD+ + L+ Sbjct: 1494 EGRKISFTYDIYGNKTSETDEKGNKK---------TLTYDADNALIDTKLANGTSVA--- 1541 Query: 69 RYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTW----------YGWDGDRLTTIQND 118 Y YD G K V + ++T Y +D T Sbjct: 1542 -YKYDDNGNTTEKNVTASGKTQKNIYEYDVDNKITAFTDALNRTIKYEYDAAGNETKAIM 1600 Query: 119 RTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLD 178 T S + ++ K Q + + + + + Sbjct: 1601 PNGRVTESTYDSADRMDGIKWNDKLAFKFQYDPNGNQTKVTDEINSIVTDKTYDDANRIT 1660 Query: 179 RLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVST 238 ++ + + + + G T +++ K + D Sbjct: 1661 KVAERGGDVSYTYKDKPTKDNKGKT-DKVGEVAINHGDYTAKTSYTYNDLDRNTRV---N 1716 Query: 239 EGATEWCAEYDEWGNLLNEENPHQLQQLIRL 269 +G+ E+DE+GN+ + Sbjct: 1717 DGSKNAYFEFDEFGNINVYTAGNGTAANYTY 1747 Score = 65.6 bits (158), Expect = 4e-09, Method: Composition-based stats. Identities = 44/280 (15%), Positives = 87/280 (31%), Gaps = 30/280 (10%) Query: 4 DNRIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAE 63 D ++A Y+YD +G TEK V + + + Y YD +++ +T Sbjct: 1531 DTKLANGTSVAYKYDDNGNTTEKN------VTASGKTQKNIYEYDVDNKITAFTDALN-- 1582 Query: 64 PLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTW---------YGWDGDRLTT 114 +Y YD G + + + S R + W Y +G++ T Sbjct: 1583 --RTIKYEYDAAGNETKAIMPNGRVTESTYDSADRMDGIKWNDKLAFKFQYDPNGNQ-TK 1639 Query: 115 IQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLV 174 + ++ I T + +V G+++ T + + + G + Sbjct: 1640 VTDEINSIVTDKTYDDANRITKVAERGGDVSYTYKDKPTKDNKGKTDKVGEVAINHGDYT 1699 Query: 175 QMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKI---HLYHCDHRGL 231 ++ + + +R S E + VYT + Y + Sbjct: 1700 -----AKTSYTYNDLDRNTRVNDGSKNAYFEFDEFGNINVYTAGNGTAANYTYDSTQKVT 1754 Query: 232 PLALVSTEGATE--WCAEYDEWGNLLNEENPHQLQQLIRL 269 A+ S G YD N + +N + Sbjct: 1755 NAAISSASGTQILDENYTYDAASNRTSIDNKQDGKTTYEY 1794 Score = 58.7 bits (140), Expect = 4e-07, Method: Composition-based stats. Identities = 41/265 (15%), Positives = 71/265 (26%), Gaps = 34/265 (12%) Query: 4 DNRIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAE 63 NR + Y Y +D RL+ T Y YD +R + T Sbjct: 1858 GNRTSD-GKYTYTWDTGDRLSSITKKGESEPF-------TSYTYDDDNRRLSKTVD---- 1905 Query: 64 PLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQ 123 V + Y YD L + + Y D RL N +T Sbjct: 1906 -GVTTNYHYD----------GDSIDVLYETDGDGKVVRQYVYSDDNVRLAMKMNGKTL-- 1952 Query: 124 TIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESE 183 Y + +I + G++ + ++ + P E E Sbjct: 1953 -YYHYNAHGDVIALTDEAGKIVAEYAYDAWGNVLKNTASTEEAKANPYGYAGYTYDKEIE 2011 Query: 184 ILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATE 243 +R + G+ + D + Y + P+ + +G Sbjct: 2012 QYY----LMARYYEPEQGVFTAYDPDPGDEDDPQTMNGYNYANN---NPVMMFDPDGNMP 2064 Query: 244 WCAEYDEWGNLLNEENPHQLQQLIR 268 W A G + + + IR Sbjct: 2065 WWAAATI-GGAIGGAAKYYITNKIR 2088 Score = 51.3 bits (121), Expect = 9e-05, Method: Composition-based stats. Identities = 40/293 (13%), Positives = 78/293 (26%), Gaps = 48/293 (16%) Query: 3 PDNRI-----ARDAHYLYRYDRHGRLTEKTDLIPEGVI-----------RTDDERTHRYH 46 D R+ + Y Y G+LT D V + R Y Sbjct: 865 ADGRLKSEKDTKGNELTYEY-TDGKLTSMRDASGRTVTLAYEGELVKELVGPENRKISYT 923 Query: 47 YDSQHRLVHYTRTQYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRK------- 99 Y+ + L+ + + RY Y G + + + + + + Sbjct: 924 YNDKQELISSSTARG----KIYRYGYTD-GLLTSIYDPKHTEEKPYETTFAYEEEKLTEI 978 Query: 100 ----PQVTWYGWDGDRLTTIQNDRTRIQTIYQP-GSFTPLIRVETATGELAKTQRRSLAD 154 + T +D + T + + +TIY + P + A G T ++ Sbjct: 979 TDPVGKKTTLSYDMEEQQTTLTNEKKKKTIYSYNDAGNPKKEIVDADGLKLTTTYTYESN 1038 Query: 155 TLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPV 214 L + G + + D ES + + +T Sbjct: 1039 NLVKEVNPKGQEETYAYDADGNI-----TQATDAYGTESYTYNGNNDVT---------SA 1084 Query: 215 YTPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLI 267 + D ++TE +YD +GN + + Sbjct: 1085 TDTEGRKTTVAYDGADAVSETLATESQVSSVTQYDAYGNPIRGSGELSSAGNL 1137 Score = 45.6 bits (106), Expect = 0.004, Method: Composition-based stats. Identities = 20/189 (10%), Positives = 44/189 (23%), Gaps = 23/189 (12%) Query: 71 LYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQPGS 130 YD G S + + + +D T + D + + Sbjct: 1479 EYDASGN-------------YVTASYDEEGRKISFTYDIYGNKTSETDEKGNKKTLTYDA 1525 Query: 131 FTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVS 190 LI + A G + +T +++ G + +R Sbjct: 1526 DNALIDTKLANGTSVAYKYDDNGNTTEKNVTASGKTQKNIYEYDVDNKITAFTDALNRTI 1585 Query: 191 EESRRWLASCGLTVEQMQNQMDPVYTPARKI----------HLYHCDHRGLPLALVSTEG 240 + + + + Y A ++ + D G + Sbjct: 1586 KYEYDAAGNETKAIMPNGRVTESTYDSADRMDGIKWNDKLAFKFQYDPNGNQTKVTDEIN 1645 Query: 241 ATEWCAEYD 249 + YD Sbjct: 1646 SIVTDKTYD 1654 >UniRef50_B2K1J9 YD repeat protein n=23 Tax=Yersinia RepID=B2K1J9_YERPB Length = 1494 Score = 196 bits (498), Expect = 2e-48, Method: Composition-based stats. Identities = 90/412 (21%), Positives = 143/412 (34%), Gaps = 74/412 (17%) Query: 3 PDNRIARDAHYL---------YRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRL 53 ++A Y YD+HG LT++ D + RYHYD ++ Sbjct: 1020 AAGQLAGYQTRRKGMVWSETDYFYDQHGNLTQREDSRQG---------SERYHYDVLGQI 1070 Query: 54 VHYTRTQYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLT 113 V Y RY YD G R + E T T Y D Sbjct: 1071 VGYQDPLG----TLHRYRYDACGDRFSTVADNAEGRHTQHD------NGTAYQLDKAGQL 1120 Query: 114 TIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGS------- 166 + DR + + +F L ++ +L + + + Sbjct: 1121 VSRTDRFSQLAL-RWNTFGRLAGIKNEH-HEHAYTYDALGRRVGKRHLQRPTKLLDGLRV 1178 Query: 167 ----------------VVFPPVLVQMLDRLESEILADRVSEESRR-----------WLAS 199 F M+ L+ E+ V+ E+ ++ Sbjct: 1179 IDKETPSRGEPVWQDETWFMWDGDVMVGELQREVAPRVVTPETWDKPDGIVYSAQFYVYQ 1238 Query: 200 CGLTVEQM---------QNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDE 250 + + +I+ Y D G+P+ L EG W A++ Sbjct: 1239 PDSFEPRALQRYQQVAEAEDGEIAPLGEEQIYFYQNDPNGMPIRLQDGEGEVVWEAQFTP 1298 Query: 251 WGNLLNEENPHQLQQLIRLPGQQYDEESGLYYNRHRYYDPLQGRYITQDPIGLKGGWNFY 310 +G L+ QL+Q +R+ GQ YD ESGL+YNR+RYYDP G +I+QDPIGLKGG N Y Sbjct: 1299 FGQ-LSVTGTSQLRQPLRMQGQYYDTESGLHYNRYRYYDPACGVFISQDPIGLKGGLNPY 1357 Query: 311 QYPLNPVQYIDSMGLASKYGHLNNGGYGARPNKPPTPDPSKLPDIAKQLRLP 362 Q+ +N + ++D +GL + ++ P L + Sbjct: 1358 QFAVNTLGWVDPLGLHRNSNNSMGYNELYIVHENDQPGAKILKIGKAKSEDK 1409 Score = 64.1 bits (154), Expect = 1e-08, Method: Composition-based stats. Identities = 66/476 (13%), Positives = 126/476 (26%), Gaps = 96/476 (20%) Query: 14 LYRYDRHGRLTEKTDLIPEGVIRTDDER--------------THRYHYDSQHR------L 53 Y Y+ G+L + R + + T Y Y++ + L Sbjct: 898 RYEYNVQGQLIGAVNPAVTVTRRYNQDGQLAQEIQQQPQVSATVEYGYNAAGQQAEQRHL 957 Query: 54 VHYTRTQYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQV----------- 102 + + + RY YD LG+ +++++ + + R + Sbjct: 958 LQHADEDDIQVQQRIRYGYDVLGQCISQQIDDHRPMAFSYDKIGRLTEQRLTPSLSHHLS 1017 Query: 103 ---------------------TWYGWDGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETAT 141 T Y +D T + D + Y ++ + Sbjct: 1018 YSAAGQLAGYQTRRKGMVWSETDYFYDQHGNLTQREDSRQGSERYHYDVLGQIVGYQDPL 1077 Query: 142 GELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEI--LADRVSEESRRWLAS 199 G L + + + D G ++ DR S+ + RW Sbjct: 1078 GTLHRYRYDACGDRFSTVADNAEGRHTQHDNGTAYQLDKAGQLVSRTDRFSQLALRWNTF 1137 Query: 200 CGLTV-----EQMQNQMDPVYTPARKIHLY----HCDHRGLPLALVSTEGATEWC-AEYD 249 L + D + K HL D + + G W + Sbjct: 1138 GRLAGIKNEHHEHAYTYDALGRRVGKRHLQRPTKLLDGLRVIDKETPSRGEPVWQDETWF 1197 Query: 250 EWGNLLNEENPHQLQQLIRLPGQQYDEESGLYYNRHRY-YDPL------QGRYITQ---- 298 W + + + + +D+ G+ Y+ Y Y P RY Sbjct: 1198 MWDGDVMVGELQREVAPRVVTPETWDKPDGIVYSAQFYVYQPDSFEPRALQRYQQVAEAE 1257 Query: 299 D----PIGLKGGWNFYQYPLN----PVQYIDSMGLASKYGHLNNGGYGARPNKPPTPDPS 350 D P+G + Y Y + P++ D G G + P Sbjct: 1258 DGEIAPLGEEQ---IYFYQNDPNGMPIRLQDGEGEVVWEAQFTPFGQLSVTGTSQLRQPL 1314 Query: 351 KLPDI---------AKQLRLPYPIDQASSAPNVFKTFFRALSPYDYTLYCRKWVKP 397 ++ + R P + + L+PY + + WV P Sbjct: 1315 RMQGQYYDTESGLHYNRYRYYDPACGVFISQDPIGLK-GGLNPYQFAVNTLGWVDP 1369 Score = 62.9 bits (151), Expect = 2e-08, Method: Composition-based stats. Identities = 38/267 (14%), Positives = 65/267 (24%), Gaps = 38/267 (14%) Query: 13 YLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYLY 72 + YD G+L D + YD+ L T + + + + Sbjct: 685 THFTYDDLGQLVAVVDASQ---------QRTELAYDAWGFLRVITDARGN----ATSFKH 731 Query: 73 DPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQPGSFT 132 D G + K + +T Y +D + T + Sbjct: 732 DFCGNLLKKVAANGD--------------ITRYQYDKKQRLTGCTLPDARTIRCEYDRED 777 Query: 133 PLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLV--------QMLDRLESEI 184 L+ + G LQ DG + Q + + + Sbjct: 778 NLL-LYNENGSRITRFGYFGQGRLQSRTDPDGSLTEYLYDTEEQLIGVKNQRGETWQLKR 836 Query: 185 LADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEW 244 A+ E + + + P +I CD G W Sbjct: 837 NAEGRLIEEVDYWGQSRGYQYNAVGHLTGSHDPLGQILAVTCDKLGRITEKSIAGDEQAW 896 Query: 245 -CAEYDEWGNLLNEENPHQLQQLIRLP 270 EY+ G L+ NP R Sbjct: 897 ERYEYNVQGQLIGAVNPAVTVTR-RYN 922 Score = 62.9 bits (151), Expect = 2e-08, Method: Composition-based stats. Identities = 66/458 (14%), Positives = 125/458 (27%), Gaps = 63/458 (13%) Query: 2 WPDNRIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDER------------THRYHYDS 49 W D + Y + YDR + T+ TD + + DER + Y YD+ Sbjct: 551 WGDGGLF---DYRFHYDRVYQETQITDSLGHTTLLRYDERGLPFARVTPLGGVYSYQYDA 607 Query: 50 QHRLVHYTRTQYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSR-------KPQV 102 Q R + ++YD + R T + + + Sbjct: 608 QCRTIAEIDPAGN----THGWVYDQYANLTEETFADRSSVKTEYGDDHKPVRITDPGGRF 663 Query: 103 TWYGWDGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGE 162 WD Q +I T + L+ V A+ + + + + Sbjct: 664 WRQSWDAQGKVISQTTPGKIATHFTYDDLGQLVAVVDASQQRTELAYDAWGFLRVITDAR 723 Query: 163 DGGSVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIH 222 + +L ++ + R + ++ L C L + Sbjct: 724 GNATSFKHDFCGNLLKKVAANGDITRYQYDKKQRLTGCTLPDARTIRCEYDREDN----- 778 Query: 223 LYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQYD----EES 278 L L + G+ Y G L + +P ++ + Sbjct: 779 ----------LLLYNENGSRITRFGYFGQGRLQSRTDPDGSLTEYLYDTEEQLIGVKNQR 828 Query: 279 GLYYNRHRYYDPLQGRYITQDPIGLKGGWNFYQY--------PLNPVQYI-----DSMGL 325 G + R +GR I + + G YQY +P+ I D +G Sbjct: 829 GETWQLKRN---AEGRLIEE--VDYWGQSRGYQYNAVGHLTGSHDPLGQILAVTCDKLGR 883 Query: 326 ASKYGHLNNGGYGARPNKPPTPDPSKLPDIAKQLRLPYPIDQASSAPNVFKTFFRALSPY 385 ++ + R + A + Y D + + A Y Sbjct: 884 ITEKSIAGDEQAWERYEYNVQGQLIGAVNPAVTVTRRYNQDGQLAQEIQQQPQVSATVEY 943 Query: 386 DYTLYCRKWVKPNLTCTPQDDSQYPGMDTKTASDYLPQ 423 Y ++ + +L +D + D L Q Sbjct: 944 GYNAAGQQAEQRHLLQHADEDDIQVQQRIRYGYDVLGQ 981 Score = 49.8 bits (117), Expect = 2e-04, Method: Composition-based stats. Identities = 32/230 (13%), Positives = 58/230 (25%), Gaps = 43/230 (18%) Query: 60 QYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGW--DGDRLTTIQN 117 E Y +D G +A +L + + D + Sbjct: 483 TNGERRFLVGYRHDGEGNLIA--------------TLDADNHPYQFEYIADSQMVRHTDR 528 Query: 118 DRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQS---GGEDGGSVVFPPV-- 172 + YQ S L RVE A G+ R D + Q G + + Sbjct: 529 NGLSFYYRYQRHSDG-LDRVEHAWGDGGLFDYRFHYDRVYQETQITDSLGHTTLLRYDER 587 Query: 173 -------------LVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPAR 219 D I + + W+ + + Sbjct: 588 GLPFARVTPLGGVYSYQYDAQCRTIAEIDPAGNTHGWVYDQYANLTEETFADRSSVKTE- 646 Query: 220 KIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRL 269 Y DH+ P+ + G W +D G ++++ P ++ Sbjct: 647 ----YGDDHK--PVRITDPGGR-FWRQSWDAQGKVISQTTPGKIATHFTY 689 >UniRef50_C6CNW6 YD repeat protein n=8 Tax=Enterobacteriaceae RepID=C6CNW6_DICZE Length = 1679 Score = 196 bits (498), Expect = 2e-48, Method: Composition-based stats. Identities = 79/358 (22%), Positives = 124/358 (34%), Gaps = 49/358 (13%) Query: 7 IARDAHYLYRYDRHGRLTEKTD------------LIPEGVIRTDDERTHR---YHYDSQH 51 ++ YRYD RLT +D R + R + + YDS+ Sbjct: 1224 VSGVLERRYRYDVLDRLTGLSDSHWGEQALRLNGTGQVVAERREQGRRQQARLFGYDSEQ 1283 Query: 52 RLVHYTRTQYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDG-D 110 L + + D GR A + + Y +D Sbjct: 1284 NLCEVSAIEP-----------DGAGRLSASNAVVQASSGYDTAGRVVMRGDSRYQYDACG 1332 Query: 111 RLTTIQNDRTRIQ---TIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDG--G 165 RL + + R + T + + L+RV G + + + + G Sbjct: 1333 RLVSKRESRAGFRPRDTQFGWDAQDRLVRVSLPDGSRWRYGYDAFGRRVSKVREGQGPSA 1392 Query: 166 SVVFPPVLVQMLDRL--ESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHL 223 V D+L +++ AD + +W+ G Q + T ++H Sbjct: 1393 QAVARVAYRWDGDQLSGQTQYRADGSVARAVQWVYEPGSFRPLAQVEEKGGRT---QLHY 1449 Query: 224 YHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNE------------ENPHQLQQLIRLPG 271 D G L S G W E WG E ++ +R G Sbjct: 1450 IVTDLTGTARELCSETGEVHWRGEQALWGAHREEKIPIPLRRWLGDAANEEVYCELRYQG 1509 Query: 272 QQYDEESGLYYNRHRYYDPLQGRYITQDPIGLKGGWNFYQYPLNPVQYIDSMGLASKY 329 Q YD E+GLYYNRHRYYDP +Y++ DP+G+ GG Y NP++++D GL Sbjct: 1510 QVYDSETGLYYNRHRYYDPETAQYLSGDPLGIAGGLRPQGYVHNPMEWVDPFGLVGCP 1567 Score = 78.7 bits (192), Expect = 4e-13, Method: Composition-based stats. Identities = 44/278 (15%), Positives = 74/278 (26%), Gaps = 45/278 (16%) Query: 13 YLYRYDRHGRLTEKTDLIPEG------------VIRTDDERTHRYHYDSQHRLVHYTRTQ 60 + Y D GR+ +D + D R RYHY+ + L Sbjct: 865 WRYTRDAAGRVDTASDPEGRTWQHRYSPQGLLSGVTGPDGRVQRYHYNRRGLLERLE--- 921 Query: 61 YAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQV-----------TWYGWDG 109 AE + YD R + + + + T +G+DG Sbjct: 922 -AEGTSPVTFFYDGHDRLTERHIAHEQGVQVRRWVYEGGRETPEKVIYEDGSETRFGYDG 980 Query: 110 DRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVF 169 + T D + ++ G+F L+ G + + ++ F Sbjct: 981 EGNLTSVTDALGQRYQFRYGAFDNLLEATDPLGASVRYHYNAESE--------------F 1026 Query: 170 PPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHR 229 V + E R + + Q+ P Y D Sbjct: 1027 AGVTNSQGQTWQYRFDTAGRLSEERHYDGRVYRYDYDVAGQLASRQAPDGSRLAYGYDAG 1086 Query: 230 G---LPLALV-STEGATEWCAEYDEWGNLLNEENPHQL 263 G A+ G YD G LL +P + Sbjct: 1087 GRLRTIEAVSADGAGEGTTTFAYDLSGRLLKAASPDAV 1124 Score = 70.2 bits (170), Expect = 2e-10, Method: Composition-based stats. Identities = 53/343 (15%), Positives = 87/343 (25%), Gaps = 73/343 (21%) Query: 1 MWPDNRIA-------RDAHYLYRYDRHGRLTEKTDLIPE--------------------- 32 ++ R + + YD G LT TD + + Sbjct: 955 VYEGGRETPEKVIYEDGSETRFGYDGEGNLTSVTDALGQRYQFRYGAFDNLLEATDPLGA 1014 Query: 33 ------------GVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYLYDPLGRRVA 80 + +T +Y +D+ RL RY YD G+ + Sbjct: 1015 SVRYHYNAESEFAGVTNSQGQTWQYRFDTAGRLSEERHYDG----RVYRYDYDVAGQLAS 1070 Query: 81 KRVWRRERDLTGWMSLSR------------KPQVTWYGWD-GDRLTTIQNDRTRIQTIYQ 127 ++ R G+ + R T + +D RL + + Y Sbjct: 1071 RQAPDGSRLAYGYDAGGRLRTIEAVSADGAGEGTTTFAYDLSGRLLKAASPDAVV--EYA 1128 Query: 128 PGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPP---VLVQMLDRLESEI 184 ++ ET GE +T G S+ + + + L Sbjct: 1129 YNRAGQVVS-ETVNGEEVRTGYDDGGQRSVVEGLLASLSLGWQGGRLTTLGIGSHLPLTF 1187 Query: 185 LADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKI-----HLYHCDHRGLPLALVSTE 239 EE RR S + + Y D L + Sbjct: 1188 SHTASGEEQRRSNGSGFALRHEWSAAGLLSRQALEGVSGVLERRYRYDVLDRLTGLSDSH 1247 Query: 240 -GATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEESGLY 281 G G ++ E +Q RL G YD E L Sbjct: 1248 WGEQALRLNGT--GQVVAERREQGRRQQARLFG--YDSEQNLC 1286 Score = 62.1 bits (149), Expect = 5e-08, Method: Composition-based stats. Identities = 44/299 (14%), Positives = 72/299 (24%), Gaps = 63/299 (21%) Query: 16 RYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYLYDPL 75 YD GR + D +G + + YD +T ++ + Y+ D Sbjct: 742 EYDEQGR--SRRDRTADGFWPGE------FRYDDD----AFTSQYHSGFGGVTTYVRDAR 789 Query: 76 GRRVAKRVWRRERDLTGW------MSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQPG 129 + +R W T Y + T Y+ Sbjct: 790 NNILLRREPDGGEYRFEWVDNQLAAESDPLGGRTEYQRNDWGQVTAVTLPDGATHRYEYD 849 Query: 130 SFTPLIRVETATGELAKTQRRSLAD--------------------TLQQSGGEDGGSVVF 169 L+ G + R + L G DG + Sbjct: 850 DDGQLLAYIDPLGSAWRYTRDAAGRVDTASDPEGRTWQHRYSPQGLLSGVTGPDGRVQRY 909 Query: 170 PPVLVQMLDRLESEIL------------------ADRVSEESRRWLASCGLTVEQMQNQM 211 +L+RLE+E A + RRW+ G + Sbjct: 910 HYNRRGLLERLEAEGTSPVTFFYDGHDRLTERHIAHEQGVQVRRWVYEGGRETPEKVIYE 969 Query: 212 DPVYTPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRLP 270 D T D G ++ G + Y + NLL +P Sbjct: 970 DGSETRFG------YDGEGNLTSVTDALGQ-RYQFRYGAFDNLLEATDPLGASVRYHYN 1021 Score = 61.4 bits (147), Expect = 8e-08, Method: Composition-based stats. Identities = 58/375 (15%), Positives = 97/375 (25%), Gaps = 42/375 (11%) Query: 3 PDNRIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYA 62 + + Y YD GRL + +G E T + YD RL+ A Sbjct: 1069 ASRQAPDGSRLAYGYDAGGRLRTIEAVSADGA----GEGTTTFAYDLSGRLLKA-----A 1119 Query: 63 EPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKP-----QVTWYGWDGDRLTTIQ- 116 P Y Y+ G+ V++ V E R GW G RLTT+ Sbjct: 1120 SPDAVVEYAYNRAGQVVSETVNGEEVRTGYDDGGQRSVVEGLLASLSLGWQGGRLTTLGI 1179 Query: 117 NDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQM 176 + + + + L G + ++ Sbjct: 1180 GSHLPLTFSHTASGEEQRRSNGSGFALRHEWSAAGLLSRQALEGVSGVLERRYRYDVLDR 1239 Query: 177 LDRLE----SEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLP 232 L L E +Q + ++ D G Sbjct: 1240 LTGLSDSHWGEQALRLNGTGQVVAERREQGRRQQARLFGYDSEQNLCEVSAIEPDGAGRL 1299 Query: 233 LAL---------VSTEGATE----WCAEYDEWGNLLNEENPHQLQQL----IRLPGQQYD 275 A T G +YD G L+++ + Q Sbjct: 1300 SASNAVVQASSGYDTAGRVVMRGDSRYQYDACGRLVSKRESRAGFRPRDTQFGWDAQDRL 1359 Query: 276 EESGLYY-NRHRY-YDPLQGRYITQDPIGLKGGWNFYQYPLNPVQYIDSMGLASKYGHLN 333 L +R RY YD GR +++ + G + ++ D L+ + + Sbjct: 1360 VRVSLPDGSRWRYGYD-AFGRRVSK--VREGQGPSAQAVARVAYRW-DGDQLSGQTQYRA 1415 Query: 334 NGGYGARPNKPPTPD 348 +G P Sbjct: 1416 DGSVARAVQWVYEPG 1430 Score = 59.1 bits (141), Expect = 3e-07, Method: Composition-based stats. Identities = 40/272 (14%), Positives = 58/272 (21%), Gaps = 29/272 (10%) Query: 3 PDNRIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYA 62 PD R+ T L R + RY YD+Q L++ + Sbjct: 666 PDGRLVHVETQR---------RRITTLTLCDEHRQPLKTLVRYQYDAQGYLLNVRAGEGR 716 Query: 63 EPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRI 122 Y Y P G + + R R + Sbjct: 717 N----FDYQYAPQGWLLRWSDLAHTWVEHEYDEQGRS-----------RRDRTADGFWPG 761 Query: 123 QTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLES 182 + Y +FT R+ ++ G + L D L Sbjct: 762 EFRYDDDAFTSQYHSGFGGVTTYVRDARNNILLRREPDGGEYRFEWVDNQLAAESDPLGG 821 Query: 183 EILADRVSEESRRWLASCGLTVEQMQNQMDPVY----TPARKIHLYHCDHRGLPLALVST 238 R + + + D P Y D G Sbjct: 822 RTEYQRNDWGQVTAVTLPDGATHRYEYDDDGQLLAYIDPLGSAWRYTRDAAGRVDTASDP 881 Query: 239 EGATEWCAEYDEWGNLLNEENPHQLQQLIRLP 270 EG W Y G L P Q Sbjct: 882 EGR-TWQHRYSPQGLLSGVTGPDGRVQRYHYN 912 >UniRef50_D0KZB0 YD repeat protein n=1 Tax=Halothiobacillus neapolitanus c2 RepID=D0KZB0_HALNC Length = 1467 Score = 195 bits (496), Expect = 2e-48, Method: Composition-based stats. Identities = 71/318 (22%), Positives = 111/318 (34%), Gaps = 26/318 (8%) Query: 12 HYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYL 71 +Y Y YD +G +T ++ Y YD RL+ + + + Sbjct: 994 NYGYSYDANGNMTGQSGPDGAAA----------YQYDPLDRLIDESW---GTGNYHNAFS 1040 Query: 72 YDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQPGSF 131 YD G R+ + S ++ +G L N Y + Sbjct: 1041 YDNNGNRLTSLDSGGNTVDYSYDLQS--NRLNQHGSQKITLDAAGNTTNDGTYQYLYDAA 1098 Query: 132 TPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSE 191 L V + +A + ++ + P + ++ + Sbjct: 1099 GRLSEVLLSGVTVASYRYDYRGLRREKIIAAGTTEFTYGPSGHLLSEQ----------NT 1148 Query: 192 ESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEW 251 S T Q ++ I+ H D G P + T W D + Sbjct: 1149 ASGGRDYVWSDTSPIAQIDVNGSNQANDAIYYLHTDAMGTPRLATNANQQTVWRWNRDAF 1208 Query: 252 GNLLNEENPHQLQQLIRLPGQQYDEESGLYYNRHRYYDPLQGRYITQDPIGLKGGWNFYQ 311 G+ + ++ +R PGQ YD E+GL+YN +RYYDP GRY T DPIGL GG N + Sbjct: 1209 GDRQVNASSASIEMNLRYPGQYYDTETGLFYNWNRYYDPSTGRYATSDPIGLSGGVNTFG 1268 Query: 312 YPL-NPVQYIDSMGLASK 328 Y NP+ ID GL Sbjct: 1269 YVSANPLALIDPWGLFGS 1286 Score = 69.8 bits (169), Expect = 2e-10, Method: Composition-based stats. Identities = 34/273 (12%), Positives = 65/273 (23%), Gaps = 37/273 (13%) Query: 18 DRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYLYDPLGR 77 D G L ++TD ++ + YD +RL+ + Y YD Sbjct: 725 DALGNLVQQTDP--------NNNAPTTHSYDPLNRLIQ----TVNAIGGTTSYGYDVNAE 772 Query: 78 RVAKRVWRRERDLTGWMSLSRKPQ-------VTWYGWDGDRLTTIQNDRTRIQTIYQPGS 130 Q T Y +D + D + Y + Sbjct: 773 INQVITPNGATTGYQNDDFGDLLQEVSPDRGTTTYAYDAAGNLIQKTDARGVIANYSYDA 832 Query: 131 FTPLIRVE----TATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLD---RLESE 183 L + + T G + + D + ++ Sbjct: 833 LNRLTATHFSGMSQASDADITLTYDHGQNCSNGIGHLCTAQDQSGTTIYAYDAFGNILNQ 892 Query: 184 ILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEG--- 240 I + + + + G + + Y D G + +T Sbjct: 893 IHSAGTTTSTISYRYDNGNRIAMIIYPDGREVG-------YTRDAIGRVQGITTTAAGNS 945 Query: 241 -ATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQ 272 +Y G+L E + L + Q Sbjct: 946 QTLVSARQYHADGSLTGETFGNGLADQRQYTAQ 978 Score = 68.7 bits (166), Expect = 4e-10, Method: Composition-based stats. Identities = 39/269 (14%), Positives = 74/269 (27%), Gaps = 59/269 (21%) Query: 16 RYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVES------- 68 YD GRL +KTD + Y YD + RL T+ + Sbjct: 589 AYDADGRLLQKTD---------PNGLVTSYAYDPRGRLSRITQQASGSSARVTTFAYTPS 639 Query: 69 --------------RYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDG----- 109 Y YD A ++ + S + Q + Y D Sbjct: 640 SKLASTSLPDGRTLTYSYDDAQELTAITDNLGDKVSYAYDSRGNRSQTSIYDPDSSLVRQ 699 Query: 110 --------DRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGG 161 + L + + + Q + + L++ T + L Q+ Sbjct: 700 IKSVYDLRNHLASSNDSGSITQQVT--DALGNLVQQTDPNNNAPTTHSYDPLNRLIQTVN 757 Query: 162 EDGGSVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKI 221 GG+ + + ++++ + + G ++++ +P R Sbjct: 758 AIGGTTSYGYDVNAEINQVIT-----PNGATTGYQNDDFGDLLQEV--------SPDRGT 804 Query: 222 HLYHCDHRGLPLALVSTEGATEWCAEYDE 250 Y D G + G YD Sbjct: 805 TTYAYDAAGNLIQKTDARG-VIANYSYDA 832 Score = 68.7 bits (166), Expect = 4e-10, Method: Composition-based stats. Identities = 38/323 (11%), Positives = 72/323 (22%), Gaps = 73/323 (22%) Query: 11 AHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYA-------- 62 Y YD G L +KTD Y YD+ +RL + + Sbjct: 803 GTTTYAYDAAGNLIQKTDAR---------GVIANYSYDALNRLTATHFSGMSQASDADIT 853 Query: 63 --------------------EPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQV 102 + + Y YD G + + T ++ Sbjct: 854 LTYDHGQNCSNGIGHLCTAQDQSGTTIYAYDAFGNILNQIHSAGTTTSTISYRYDNGNRI 913 Query: 103 T----------WYGWDGDRL-----TTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKT 147 Y D TT + + + Q + L G + Sbjct: 914 AMIIYPDGREVGYTRDAIGRVQGITTTAAGNSQTLVSARQYHADGSLTGETFGNGLADQR 973 Query: 148 QRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLES-----------EILADRVSEESRRW 196 Q + + G ++ + + + L + E Sbjct: 974 QYTAQGRLSSWTLGGSNVNLNYGYSYDANGNMTGQSGPDGAAAYQYDPLDRLIDESWGTG 1033 Query: 197 LASCGLTVEQMQNQMDPVYTPARKIHLYHC------DHRGLPLALVSTEGATEW----CA 246 + + N++ + + + + + G + G T Sbjct: 1034 NYHNAFSYDNNGNRLTSLDSGGNTVDYSYDLQSNRLNQHGSQKITLDAAGNTTNDGTYQY 1093 Query: 247 EYDEWGNLLNEENPHQLQQLIRL 269 YD G L R Sbjct: 1094 LYDAAGRLSEVLLSGVTVASYRY 1116 Score = 65.6 bits (158), Expect = 4e-09, Method: Composition-based stats. Identities = 36/268 (13%), Positives = 69/268 (25%), Gaps = 45/268 (16%) Query: 13 YLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYLY 72 Y YD G ++ + P+ + + YD ++ L + V Sbjct: 674 VSYAYDSRGNRSQTSIYDPDSSLVRQIKSV----YDLRNHLASSNDSGSITQQVT----- 724 Query: 73 DPLGRRVAKRVWRRERDLTGWMSLSRK--------PQVTWYGWDGDRLTTIQNDRTRIQT 124 D LG V + T + T YG+D + T Sbjct: 725 DALGNLVQQTDPNNNAPTTHSYDPLNRLIQTVNAIGGTTSYGYDVNAEINQVITPNGATT 784 Query: 125 IYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEI 184 YQ F L++ + + + +Q++ + L ++ S + Sbjct: 785 GYQNDDFGDLLQEVSPDRGTTTYAYDAAGNLIQKTDARGVIANYSYDALNRLTATHFSGM 844 Query: 185 LADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEW 244 ++ + + + G G T Sbjct: 845 SQASDADITLTYDHGQN-----------------------CSNGIGHLCTAQDQSGTTI- 880 Query: 245 CAEYDEWGNLLNE---ENPHQLQQLIRL 269 YD +GN+LN+ R Sbjct: 881 -YAYDAFGNILNQIHSAGTTTSTISYRY 907 Score = 61.7 bits (148), Expect = 5e-08, Method: Composition-based stats. Identities = 38/278 (13%), Positives = 68/278 (24%), Gaps = 46/278 (16%) Query: 8 ARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVE 67 ++D + +T+ D +T +Y YDSQ+RL T+ Sbjct: 426 GDGKGLTQQFDARNNVISRTNA---------DGQTTQYTYDSQNRLASETQAAGTSQART 476 Query: 68 SRY----------------------------LYDPLGRRVAKRVWRRER-----DLTGWM 94 Y YD + + + Sbjct: 477 VSYQYGTDGLALPAEIDRPSVCAGSSQQTVITYDAHHNPIQITENGYTPACSAISRSLSL 536 Query: 95 SLSRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLAD 154 + QVT DG R G+ L+ + A G + Sbjct: 537 GYNSAGQVTRI--DGPRTDVSDVTTMSYNNCTTGGACGQLLSLTDALGHITTFNAYDADG 594 Query: 155 TLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPV 214 L Q +G + L R+ + + + S L + + Sbjct: 595 RLLQKTDPNGLVTSYAYDPRGRLSRITQQASGSSARVTTFAYTPSSKLASTSLPDGRTLT 654 Query: 215 YT-PARKIHLYHCDHRGL-PLALVSTEGATEWCAEYDE 250 Y+ + D+ G + G + YD Sbjct: 655 YSYDDAQELTAITDNLGDKVSYAYDSRGNRSQTSIYDP 692 Score = 56.0 bits (133), Expect = 3e-06, Method: Composition-based stats. Identities = 32/244 (13%), Positives = 61/244 (25%), Gaps = 35/244 (14%) Query: 12 HYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYL 71 + Y+ +GRL TD + Y YD+ L +Y Sbjct: 292 TLTFTYNSYGRLVSLTD---------PVGQVTSYSYDTAGNLAQVNYPDG----TAKQYS 338 Query: 72 Y---------------DPLGRRVAKRVWRRERDL-TGWMSLSRKPQVTWYGWDGDRLTTI 115 Y D G + + LS Q +D D TT+ Sbjct: 339 YGDSSFSHALTGVAFVDANGNVTPFDNFVYDSYGKVTTNELSGGQQRFDLSYDSDTQTTV 398 Query: 116 QNDRTRI---QTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPV 172 N R Q G L + G+ Q + + + ++ + + Sbjct: 399 TNAAGRQDVLTFQAQLGVKNLLSNIVQGDGKGLTQQFDARNNVISRTNADGQTTQYTYDS 458 Query: 173 LVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLP 232 ++ A + + + V + + + D P Sbjct: 459 QNRL---ASETQAAGTSQARTVSYQYGTDGLALPAEIDRPSVCAGSSQQTVITYDAHHNP 515 Query: 233 LALV 236 + + Sbjct: 516 IQIT 519 Score = 54.4 bits (129), Expect = 1e-05, Method: Composition-based stats. Identities = 38/250 (15%), Positives = 60/250 (24%), Gaps = 30/250 (12%) Query: 16 RYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYLYDPL 75 RYD HG L +TD RT Y YDS + + T + Y+ Sbjct: 254 RYDLHGHLLSETDRA---------GRTTTYTYDSANHIAAVTGPFGH----TLTFTYNSY 300 Query: 76 GRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQPGSFTPLI 135 GR V+ + Y G+ D T Q Y SF+ + Sbjct: 301 GRLVSLTDPVGQVTS------------YSYDTAGNLAQVNYPDGTAKQYSYGDSSFSHAL 348 Query: 136 RVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSEESRR 195 D + + + Sbjct: 349 TGVAFVDANGNVTPFDNFVYDSYGKVTTNELSGGQQRFDLSYDSDTQTTVTNAAGRQDVL 408 Query: 196 WLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLL 255 + + N + + D R ++ + +G T YD L Sbjct: 409 TFQAQLGVKNLLSNIVQGDGKGLTQQF----DARNNVISRTNADGQTT-QYTYDSQNRLA 463 Query: 256 NEENPHQLQQ 265 +E Q Sbjct: 464 SETQAAGTSQ 473 Score = 44.0 bits (102), Expect = 0.013, Method: Composition-based stats. Identities = 20/146 (13%), Positives = 39/146 (26%), Gaps = 15/146 (10%) Query: 48 DSQHRLVHYTRTQYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGW 107 DS+ +L + S YD G +++ R + T Y + Sbjct: 231 DSKLQLTQDATGYTLQRQDGSSDRYDLHGHLLSET--------------DRAGRTTTYTY 276 Query: 108 DGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSV 167 D + S+ L+ + G++ + + L Q DG + Sbjct: 277 DSANHIAAVTGPFGHTLTFTYNSYGRLVSLTDPVGQVTSYSYDTAGN-LAQVNYPDGTAK 335 Query: 168 VFPPVLVQMLDRLESEILADRVSEES 193 + L D + Sbjct: 336 QYSYGDSSFSHALTGVAFVDANGNVT 361 Score = 44.0 bits (102), Expect = 0.014, Method: Composition-based stats. Identities = 28/199 (14%), Positives = 50/199 (25%), Gaps = 22/199 (11%) Query: 3 PDNRIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYA 62 D Y Y YD GRL+E Y YD + R + Sbjct: 1081 AAGNTTNDGTYQYLYDAAGRLSEVL---------LSGVTVASYRYDYRG-----LRREKI 1126 Query: 63 EPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRI 122 + + Y P G ++++ W S Q+ G + I Sbjct: 1127 IAAGTTEFTYGPSGHLLSEQNTASGGRDYVWSDTSPIAQIDVNGSN--------QANDAI 1178 Query: 123 QTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLES 182 ++ TP + + + R + D + + P + Sbjct: 1179 YYLHTDAMGTPRLATNANQQTVWRWNRDAFGDRQVNASSASIEMNLRYPGQYYDTETGLF 1238 Query: 183 EILADRVSEESRRWLASCG 201 + R+ S Sbjct: 1239 YNWNRYYDPSTGRYATSDP 1257 >UniRef50_A1TTP6 YD repeat protein n=2 Tax=Acidovorax citrulli AAC00-1 RepID=A1TTP6_ACIAC Length = 1554 Score = 195 bits (495), Expect = 3e-48, Method: Composition-based stats. Identities = 77/422 (18%), Positives = 124/422 (29%), Gaps = 91/422 (21%) Query: 6 RIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTH---RYHYDSQHRLVH------- 55 R H Y YD GRL + + Y YD+ +LV Sbjct: 1036 RSQGALHSRYDYDPAGRLVRHRAAVGASSTSSSATTVRLERAYAYDALGQLVARADTLRG 1095 Query: 56 -------------YTRTQYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQV 102 + +DP G + + +R S + Sbjct: 1096 SQEFRYDPVGRILAALPGQGSHAPRELFAFDPAGNLLDATEAQMQRAQQPQAHGSSSSGL 1155 Query: 103 ---------------TWYGWDGDRLTTIQNDRTRIQTIYQ---PGSFTPLIRV---ETAT 141 Y G+ + + +R + L+ Sbjct: 1156 GVVGDNRLRFYQDLHFEYDVHGNVVRRTRGNRRAGHHETTELRWNADHQLVEAASHRNGV 1215 Query: 142 GELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSEESRRWLASCG 201 + +L + ++ ++ L+ R ++ ++ G Sbjct: 1216 TQATHYAYDALGRRVAKADAFGTTRYLWDGDLMVHSQR----------GGKASLFIYEPG 1265 Query: 202 LTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPH 261 V Q + +I+ Y CD G PL L +G W A+Y WG P Sbjct: 1266 SFVPLATVQGTQQPGDS-RIYWYQCDQIGAPLELTDAQGYIAWAADYKVWGEATLRAVPR 1324 Query: 262 Q------------------------------------LQQLIRLPGQQYDEESGLYYNRH 285 ++Q R GQQ+DEE+GL+YNR Sbjct: 1325 TATGTDGVSGERRRGHGPVMDVHEGGGEKARPTPPAIIEQPFRFQGQQFDEETGLHYNRF 1384 Query: 286 RYYDPLQGRYITQDPIGLKGGWNFYQYPLNPVQYIDSMGLASKYGHLNNGGYGARPNKPP 345 RYY+P GR+++QDPIGL GG N + Y +P ++D GL+ Sbjct: 1385 RYYEPSVGRFVSQDPIGLLGGVNSFTYAPSPNNWMDPFGLSCCPCPTGTATIHHYEGTAD 1444 Query: 346 TP 347 P Sbjct: 1445 NP 1446 Score = 78.3 bits (191), Expect = 6e-13, Method: Composition-based stats. Identities = 47/248 (18%), Positives = 70/248 (28%), Gaps = 32/248 (12%) Query: 10 DAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESR 69 Y YD G L E D + T RY +D+Q RL A R Sbjct: 741 GRTSRYAYDALGHLAESADAL---------GHTTRYRHDAQGRLREVIEPTGA----THR 787 Query: 70 YLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQPG 129 Y +D G+ +A T Y + G + + D Y Sbjct: 788 YEWDGEGQLLAYTDP--------------LGGTTRYRYHGSGQPSERTDARGGVLRYHYD 833 Query: 130 SFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRV 189 L+ + G + + D L G DG + L + +D Sbjct: 834 LGERLVALTNENGAHTRFTYDAA-DHLTDEIGFDGRHQRYVYNAAGELTHVIEAGGSDAG 892 Query: 190 SEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWCAEYD 249 + + + D +R + Y D G A + A W YD Sbjct: 893 PGKVTHLERDALGRLVGKRAHGDASAEDSRATYTY--DPLGRLTAATNPAAAIAWR--YD 948 Query: 250 EWGNLLNE 257 G +L E Sbjct: 949 PVGQILQE 956 Score = 67.5 bits (163), Expect = 1e-09, Method: Composition-based stats. Identities = 35/262 (13%), Positives = 59/262 (22%), Gaps = 36/262 (13%) Query: 9 RDAHYLYRYDRHGRLTEKTDLIPEGVIRTDD------ERTHRYHYDSQHRLVHYTRTQYA 62 R + D G T G T + YD++ + T Sbjct: 641 RRGNLTLHLDAAGHATRIEYGTEGGARDRPVRVTDALGHTWTHEYDARGNRIRSTDPLGR 700 Query: 63 EPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSR-------KPQVTWYGWDGDRLTTI 115 + YD G VA W + ++ + + Y +D Sbjct: 701 STATQ----YDARGLPVALTDAAGRIRRLQWDASAQLIAYTDCSGRTSRYAYDALGHLAE 756 Query: 116 QNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQ 175 D T Y+ + L V TG + + L + G + Sbjct: 757 SADALGHTTRYRHDAQGRLREVIEPTGATHRYEWDGEGQLLAYTDPLGGTT-------RY 809 Query: 176 MLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLAL 235 R+ G + + N+ + DH Sbjct: 810 RYHGSGQPSERTDARGGVLRYHYDLGERLVALTNENG----AHTRFTYDAADHL------ 859 Query: 236 VSTEG--ATEWCAEYDEWGNLL 255 G Y+ G L Sbjct: 860 TDEIGFDGRHQRYVYNAAGELT 881 Score = 64.8 bits (156), Expect = 7e-09, Method: Composition-based stats. Identities = 41/278 (14%), Positives = 85/278 (30%), Gaps = 20/278 (7%) Query: 7 IARDAHYLYRYD---RHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAE 63 +A A + YD GR+T +L + ER + +D+ R + + + + Sbjct: 543 LADGARHHNEYDTLSPQGRVTVSRNLDSGAAHQFTYERHRTWMHDALGRTMGFAFDERRD 602 Query: 64 PLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQ 123 + D LG V++ + + + T + G+ + + Sbjct: 603 IVAVR----DALGH-VSRTPFDANGHPEAAVDALGRETRTVFDRRGNLTLHLDAAGHATR 657 Query: 124 TIY--QPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLE 181 Y + G+ +RV A G + + + ++ + + + + Sbjct: 658 IEYGTEGGARDRPVRVTDALGHTWTHEYDARGNRIRSTDPLGRSTATQYDARGLPVALTD 717 Query: 182 S----EILADRVSEESRRWLASCGLTVEQMQNQ----MDPVYTPARKIHLYHCDHRGLPL 233 + L S + + G T + + H D +G Sbjct: 718 AAGRIRRLQWDASAQLIAYTDCSGRTSRYAYDALGHLAESADALGHTTRYRH-DAQGRLR 776 Query: 234 ALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRLPG 271 ++ GA E+D G LL +P R G Sbjct: 777 EVIEPTGA-THRYEWDGEGQLLAYTDPLGGTTRYRYHG 813 Score = 59.8 bits (143), Expect = 2e-07, Method: Composition-based stats. Identities = 40/284 (14%), Positives = 70/284 (24%), Gaps = 50/284 (17%) Query: 10 DAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTH------------RYHYDSQHRLVHYT 57 A + Y +D G+L TD + RYHYD RLV T Sbjct: 783 GATHRYEWDGEGQLLAYTDPLGGTTRYRYHGSGQPSERTDARGGVLRYHYDLGERLVALT 842 Query: 58 RTQYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQN 117 A +R+ YD + + + + V + Sbjct: 843 NENGAH----TRFTYDAADHLTDEIGFDGRHQRYVYNAAGELTHVIE--------AGGSD 890 Query: 118 DRTRIQTIYQPGSFTPLIRVETAT-----GELAKTQRRSLADTLQQSGGEDGGSVVFPPV 172 T + + L+ A L + + + PV Sbjct: 891 AGPGKVTHLERDALGRLVGKRAHGDASAEDSRATYTYDPLGRLTAATNPAAAIAWRYDPV 950 Query: 173 LVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHL----YHCDH 228 + + + L + + R L+ + P +H H Sbjct: 951 GQILQEVQTLQPLPGQKGQPEERALSHEYDELGHRIRTTLPDGRALDWLHYGSGHLHQIG 1010 Query: 229 R-----GLPLALVS------------TEGATEWCAEYDEWGNLL 255 G + ++GA +YD G L+ Sbjct: 1011 LTEAGPGTRTVITDIERDALHRETQRSQGALHSRYDYDPAGRLV 1054 Score = 47.5 bits (111), Expect = 0.001, Method: Composition-based stats. Identities = 32/244 (13%), Positives = 63/244 (25%), Gaps = 31/244 (12%) Query: 8 ARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLV- 66 A D+ Y YD GRLT T+ + YD +++ +T P Sbjct: 918 AEDSRATYTYDPLGRLT----------AATNPAAAIAWRYDPVGQILQEVQTLQPLPGQK 967 Query: 67 ------ESRYLYDPLGRRVAKR-------------VWRRERDLTGWMSLSRKPQVTWYGW 107 + YD LG R+ + + +T Sbjct: 968 GQPEERALSHEYDELGHRIRTTLPDGRALDWLHYGSGHLHQIGLTEAGPGTRTVITDIER 1027 Query: 108 DGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSV 167 D Q + + + Y L+R A G + + + + + G + Sbjct: 1028 DALH-RETQRSQGALHSRYDYDPAGRLVRHRAAVGASSTSSSATTVRLERAYAYDALGQL 1086 Query: 168 VFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCD 227 V ++ + + ++ + + T A+ Sbjct: 1087 VARADTLRGSQEFRYDPVGRILAALPGQGSHAPRELFAFDPAGNLLDATEAQMQRAQQPQ 1146 Query: 228 HRGL 231 G Sbjct: 1147 AHGS 1150 >UniRef50_D2TGW0 Putative Rhs protein n=2 Tax=Citrobacter RepID=D2TGW0_CITRO Length = 1477 Score = 194 bits (493), Expect = 5e-48, Method: Composition-based stats. Identities = 90/433 (20%), Positives = 145/433 (33%), Gaps = 65/433 (15%) Query: 3 PDNRIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYA 62 P R H + YDR LT D ++ + + ++ H TRT + Sbjct: 995 PHYRRNSTLHRQWLYDRAYNLTMVCDSHRGTMVNSLT---------ANDQISHATRTGSS 1045 Query: 63 E-PLVESRYLYDPL------------------------GRRVAKRVWRRERDLTGWMSLS 97 P+ E R+ YD GR +++ + S Sbjct: 1046 AIPMREERFTYDKNLNIARRQTWMNEVMESETHQRQQHGRVTSRKYRVWRHTTSRINPDS 1105 Query: 98 R-----------KPQVTWYGWDGDRLTTIQNDRTRI----QTIYQPGSFTPLIRVETATG 142 + + T + +D + + Y+ + + L +ET G Sbjct: 1106 GMPEEGKFVRVIRDERTTWKYDVNGRLVEKRVGKSGYRPLTWRYRWDARSQLTGLETPEG 1165 Query: 143 ELAKTQRRSLADTLQQS-GGEDGGSVVFPPVLVQMLDRLESEILADRVSEESRRWLASCG 201 E + + + + D F Q+ + + + + RW+ G Sbjct: 1166 ERWEYKYDPFGRRISKRCINRDKPGAGFHWNGDQLTEEIPAGTEGKPEYRNAIRWIYEPG 1225 Query: 202 LTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPH 261 + + ++H D G L++ +G W E WG Sbjct: 1226 SFPPLARYE-------KGRLHYVITDITGRIQELLTEDGTIVWRGEQQLWGREEGRNRDD 1278 Query: 262 QLQQLIRLPGQQYDEESGLYYNRHRYYDPLQGRYITQDPIGLKGGWNFYQYPLNPVQYID 321 +R PGQ DEESGLYYNR RYYD G+Y+ DP+GL GG N Y Y NP++YID Sbjct: 1279 APACRLRFPGQYEDEESGLYYNRFRYYDCEAGQYLCADPVGLAGGLNPYGYVNNPLKYID 1338 Query: 322 SMGLA----SKYGHLNNGGYGARPNKPPTPDPSKLPDIAKQLRLPYPIDQAS----SAPN 373 +GL L G GA N P + ++A P A+ N Sbjct: 1339 PLGLNPLALPAPTSLEPWGTGATLNSIQIPKGGIIVEMAMSPGQSTPGGWATLDHIPDVN 1398 Query: 374 VFKTFFRALSPYD 386 + + + Sbjct: 1399 YVRNELAVIPEFK 1411 Score = 93.3 bits (230), Expect = 2e-17, Method: Composition-based stats. Identities = 70/452 (15%), Positives = 125/452 (27%), Gaps = 97/452 (21%) Query: 16 RYDRHGRLTE------------KTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAE 63 +YD +G LTE + R D+ Y YD+ R+ + + Sbjct: 462 QYDDNGFLTECDTFQFTHIGHEYSSEGFMTCWRDTDKTRVSYRYDNAGRVTEVSTPEG-- 519 Query: 64 PLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQ 123 + R++Y+ R + T + ++ D L T D + Sbjct: 520 -YYDDRFIYNDQERCTT--------------YTDAEGGETRFWYNEDGLVTRSLDPLGRE 564 Query: 124 TIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESE 183 T L A G + Q D + Q G S+ + L RL Sbjct: 565 ETSVW-KNTQLQSRTDALGRTTQYQYNDDGD-ISQVALPGGHSLYYDYNESGQLTRLT-- 620 Query: 184 ILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATE 243 E+ +W ++ + DP + + H D + G Sbjct: 621 ----LPGEQVWQWDYDDRGSMVSL---TDPQGRRQQFSYSEHGDLLRQIMP-----GGVT 668 Query: 244 WCAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEESGLYYNRHRYYDPLQGRYITQDPIGL 303 W +YD L P G E + GR ++ Sbjct: 669 WQWDYDALHRLRETTAPD---------GGVTQTEQDM-----------LGRLLSV----- 703 Query: 304 KGGWNFYQYPLNPVQYIDSMGLASKYGHLNNGGYGARPNKPPTPDPSKLPDIAKQLRLPY 363 D +G +++ H + G + + P + ++ +Q Sbjct: 704 ----------------QDPLGFTTQFRHSKHHA-GPQGSVEEIHRPDGVRELMRQNSEKL 746 Query: 364 PIDQASSAPNVFKTFFRA-------LSPYDYTLYCRKWVKPNLTCTPQDDSQYPGMDTKT 416 P + + A + P L CR LT + + + Sbjct: 747 PESVTDGEGRTTRYEYGAFDLLTAIIRPDGERLECRYDKLTRLTEIINAEGESYRLTYDK 806 Query: 417 ASDYLPQTNWPTTQLPPGYTCAEPYL---FPD 445 A + +T++ L Y A + FPD Sbjct: 807 AGQLVAETDFTGRTLTYSYDAAGRCIRTTFPD 838 Score = 65.6 bits (158), Expect = 3e-09, Method: Composition-based stats. Identities = 47/305 (15%), Positives = 81/305 (26%), Gaps = 44/305 (14%) Query: 1 MWPDNRIARDAHYLYRYDRHGRLTEKT--DLIPEGVIRTDDERTHRYHYDSQHRLVHYTR 58 +W + ++ D GR T+ D + + Y Y+ +L T Sbjct: 568 VWKNTQL---QSRT---DALGRTTQYQYNDDGDISQVALPGGHSLYYDYNESGQLTRLTL 621 Query: 59 TQYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSR-------KPQVTWYGWDGDR 111 ++ YD G V+ + R + + +D Sbjct: 622 P----GEQVWQWDYDDRGSMVSLTDPQGRRQQFSYSEHGDLLRQIMPGGVTWQWDYDALH 677 Query: 112 LTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPP 171 T + L+ V+ G + + Q S E + P Sbjct: 678 RLRETTAPDGGVTQTEQDMLGRLLSVQDPLGFTTQFRHSKHHAGPQGSVEE-----IHRP 732 Query: 172 VLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYT--------------- 216 V+ L R SE L + V++ R + + + P Sbjct: 733 DGVRELMRQNSEKLPESVTDGEGRTTRYEYGAFDLLTAIIRPDGERLECRYDKLTRLTEI 792 Query: 217 --PARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRL--PGQ 272 + + D G +A G T YD G + P + R Q Sbjct: 793 INAEGESYRLTYDKAGQLVAETDFTGRTL-TYSYDAAGRCIRTTFPDGTRLNRRYNVTDQ 851 Query: 273 QYDEE 277 DEE Sbjct: 852 VTDEE 856 Score = 64.4 bits (155), Expect = 8e-09, Method: Composition-based stats. Identities = 43/300 (14%), Positives = 77/300 (25%), Gaps = 46/300 (15%) Query: 6 RIARDAHYLYRYDRHGRLTEKT-------------DLIPEGVIRTDDERTHRYHY----- 47 R YRYD GR+TE + D + R+ Y Sbjct: 494 RDTDKTRVSYRYDNAGRVTEVSTPEGYYDDRFIYNDQERCTTYTDAEGGETRFWYNEDGL 553 Query: 48 -----DSQHR-LVHYT-----RTQYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSL 96 D R +++ ++Y Y+ G + + Sbjct: 554 VTRSLDPLGREETSVWKNTQLQSRTDALGRTTQYQYNDDGDISQVALPGGHSLYYDYNES 613 Query: 97 SRKP-------QVTWYGWDGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQR 149 + QV + +D D + + L+R G + Sbjct: 614 GQLTRLTLPGEQVWQWDYDDRGSMVSLTDPQGRRQQFSYSEHGDLLRQIMPGGVTWQWDY 673 Query: 150 RSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQN 209 +L L+++ DGG ++ L ++ + S+ G E + Sbjct: 674 DAL-HRLRETTAPDGGVTQTEQDMLGRLLSVQDPLGFTTQFRHSKHHAGPQGSVEEIHRP 732 Query: 210 QMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRL 269 L P ++ EG T EY + L P + R Sbjct: 733 DGVRELMRQNSEKL--------PESVTDGEGRTT-RYEYGAFDLLTAIIRPDGERLECRY 783 Score = 57.5 bits (137), Expect = 1e-06, Method: Composition-based stats. Identities = 36/220 (16%), Positives = 59/220 (26%), Gaps = 30/220 (13%) Query: 8 ARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVE 67 A Y YD+ G+L +TD RT Y YD+ R + T Sbjct: 795 AEGESYRLTYDKAGQLVAETD---------FTGRTLTYSYDAAGRCIRTTFPDGTRL--- 842 Query: 68 SRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGD-RLTTIQNDRTRIQTIY 126 R + + R T + +D RL +ND + Sbjct: 843 ---------NRRYNVTDQVTDEEVTQGDSDRVLSRTTFRYDTLCRLVEAKNDDATVTL-- 891 Query: 127 QPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLV-----QMLDRLE 181 + S L ET G + + + D + Q + Q+ D Sbjct: 892 EYDSAGRLT-AETLNGRRTEYRYDAERDYVTQRTTAGITERFTRSLTGKLSSWQLADHAP 950 Query: 182 SEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKI 221 + D E+ R + + A + Sbjct: 951 LTLEHDLCGRETARRSDAGFSLRQSHTPTGMLAEQQAGDL 990 Score = 54.4 bits (129), Expect = 9e-06, Method: Composition-based stats. Identities = 33/232 (14%), Positives = 53/232 (22%), Gaps = 43/232 (18%) Query: 10 DAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTH------------------RYHYDSQH 51 Y YD GR T + R + + YD+ Sbjct: 818 GRTLTYSYDAAGRCIRTTFPDGTRLNRRYNVTDQVTDEEVTQGDSDRVLSRTTFRYDTLC 877 Query: 52 RLVHYTRTQYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDR 111 RLV YD GR A+ + + T Y +D +R Sbjct: 878 RLVEAK-----NDDATVTLEYDSAGRLTAETLNG---------------RRTEYRYDAER 917 Query: 112 LTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGG-----EDGGS 166 Q I + L + A + + + Sbjct: 918 DYVTQRTTAGITERFTRSLTGKLSSWQLADHAPLTLEHDLCGRETARRSDAGFSLRQSHT 977 Query: 167 VVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPA 218 Q D E + R S R+WL + + + + Sbjct: 978 PTGMLAEQQAGDLTEPDPHYRRNSTLHRQWLYDRAYNLTMVCDSHRGTMVNS 1029 Score = 51.7 bits (122), Expect = 6e-05, Method: Composition-based stats. Identities = 25/205 (12%), Positives = 50/205 (24%), Gaps = 18/205 (8%) Query: 18 DRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYLYDPLGR 77 D L + + + RT RY Y + L R YD L R Sbjct: 733 DGVRELMRQNSEKLPESVTDGEGRTTRYEYGAFDLLTAIIRPDG----ERLECRYDKLTR 788 Query: 78 RVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQPGSFTPLIRV 137 ++ + + +D + D T Y + IR Sbjct: 789 LTE--------------IINAEGESYRLTYDKAGQLVAETDFTGRTLTYSYDAAGRCIRT 834 Query: 138 ETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSEESRRWL 197 G + + + V + + + + + Sbjct: 835 TFPDGTRLNRRYNVTDQVTDEEVTQGDSDRVLSRTTFRYDTLCRLVEAKNDDATVTLEYD 894 Query: 198 ASCGLTVEQMQNQMDPVYTPARKIH 222 ++ LT E + + A + + Sbjct: 895 SAGRLTAETLNGRRTEYRYDAERDY 919 >UniRef50_B4V251 LipX3 n=2 Tax=Streptomyces RepID=B4V251_9ACTO Length = 1253 Score = 194 bits (493), Expect = 5e-48, Method: Composition-based stats. Identities = 82/389 (21%), Positives = 120/389 (30%), Gaps = 42/389 (10%) Query: 10 DAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESR 69 H Y Y G LTE +L T R+ D R+ Sbjct: 821 LQHRTYAYREDGYLTEIRELSSG---------TRRFELDQVGRVTSVR-----AHGWTES 866 Query: 70 YLYDPLGRRVAKRVWRRERDLTG--WMSLSRKPQVTWYGWDGDRLTTIQN----DRTRIQ 123 Y YD G + E +L R T Y D + + R+ Sbjct: 867 YAYDSAGNLTSASAPAHETPGDREFTGTLIRSAGRTAYEHDAQGRLIRKTRKLLNGQRLV 926 Query: 124 TIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESE 183 Y + L T G L + + GSVV RL Sbjct: 927 WTYAWNAEDRLTEAVTPEGAHWHYAYDPLGRRISKHRLAADGSVVDRTEFSWDDVRLAER 986 Query: 184 ILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPAR-----------------KIHLYHC 226 D + W + G Q P+ + + Sbjct: 987 RSPDG---QVTTWDYAPGTHRPLTQTDHKPLVREQGTSLLANLAQDTTTDYSTRFYAVVT 1043 Query: 227 DHRGLPLALVSTEGATEWCAEYDEWGNLLNE-ENPHQLQQLIRLPGQQYDEESGLYYNRH 285 D G P LV++ G W WG + IR PGQ D E+GL+YN Sbjct: 1044 DALGTPTELVASGGELAWQRRTTLWGTDFPAPTDTTSADCPIRFPGQYADSETGLHYNFF 1103 Query: 286 RYYDPLQGRYITQDPIGLKGGWNFYQYPLNPVQYIDSMGLASK-YGHLNNGGYGARPNKP 344 RYY+P RYI+ DP+GL+ N + Y +N + + D +GLA++ + G G R Sbjct: 1104 RYYEPESARYISADPLGLEPAPNHHAYVVNALGWTDPLGLAARGPKDPLDLGQGYRGRLD 1163 Query: 345 PTPDPSKLPDIAKQLRLPYPIDQASSAPN 373 + +K D + + + Sbjct: 1164 TWKEGTKGTDFEIHVYDKSGREVGIFGSD 1192 Score = 84.1 bits (206), Expect = 1e-14, Method: Composition-based stats. Identities = 61/445 (13%), Positives = 108/445 (24%), Gaps = 55/445 (12%) Query: 14 LYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYLYD 73 Y YD G LTE + E + R+ YD++ R+ +T Y YD Sbjct: 293 RYGYDEVGNLTEVVNSSGEPL---------RFTYDAKGRVTSWTDRN----DTTFAYFYD 339 Query: 74 PLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYG----------WDGDRLTTIQNDRTRIQ 123 GR +R + L+G ++ + + T Y ++ + + D Sbjct: 340 TRGRV--ERTEGSDGFLSGTLAYDDQARTTTYTDSLGRRSTHQYNSGGMVVEETDPLGHT 397 Query: 124 TIYQPGSF-TPLIRVETATGELAKTQRRSLADTLQ-----QSGGEDGGSVVFPPVLVQML 177 Q + + V G + QS + + P V Sbjct: 398 VRTQWTARGDRPVSVTDPLGRTTRYTYDEAEHLTAVTLPDQSIARAAYNTLGQPTEVIEP 457 Query: 178 DRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPA--RKIHLYHCDHRGLPLAL 235 D T V + GLP+A+ Sbjct: 458 GGATWRHTYDERGNVLTTTDPLGAETRYTYDESGHLVTVTDALGHSRRVTSNAAGLPVAV 517 Query: 236 VSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEESGLYYNRHRYYDPLQGRY 295 G T D +G ++ +P + + + + R G Sbjct: 518 TDELGHTTAARR-DAFGRVVEMTDPLGQTTRMGWTTEGK-PTWRTHADGRRESWTWDGE- 574 Query: 296 ITQDPIGLKGGWNFYQYPLNPVQYIDSMGLASKYGHLNNGGYGARPNKPPTPDPSKLPDI 355 NP+ + D G +++ + G R + T Sbjct: 575 ------------------GNPLTHTDPAGNTTRHTATHFGVPATRTDPDGTTYAFAYDTE 616 Query: 356 AKQLRLPYPIDQA-SSAPNVFKTFFRALSPYDYTLYCRKWVKPNLTCTPQDDSQYPGMDT 414 + + P S A + TL LT + Sbjct: 617 LRLTGVTNPQGLIWSYAYDEAGRLVTETDFNGRTLAYTHDASDGLTSRTNGAGETLRFTR 676 Query: 415 KTASDYLPQTNWPTTQLPPGYTCAE 439 + Q Y + Sbjct: 677 DALGRVIEQRTDTGDTTTYAYGASG 701 Score = 76.0 bits (185), Expect = 3e-12, Method: Composition-based stats. Identities = 70/430 (16%), Positives = 114/430 (26%), Gaps = 36/430 (8%) Query: 59 TQYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQND 118 V RY YD +G ++ + + +D T D Sbjct: 283 DDAGAGTVVMRYGYDEVGNLTE--------------VVNSSGEPLRFTYDAKGRVTSWTD 328 Query: 119 RTRIQTIYQPGSFTPLIRVETATG----------ELAKTQRRSLADTLQQSGGEDGGSVV 168 R Y + + R E + G + T GG VV Sbjct: 329 RNDTTFAYFYDTRGRVERTEGSDGFLSGTLAYDDQARTTTYTDSLGRRSTHQYNSGGMVV 388 Query: 169 FPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDH 228 + R + DR + L + V P + I + Sbjct: 389 EETDPLGHTVRTQWTARGDRPVSVT-DPLGRTTRYTYDEAEHLTAVTLPDQSIARAAYNT 447 Query: 229 RGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRL--PGQQYDEESGLYYNRHR 286 G P ++ GA W YDE GN+L +P + G L ++R R Sbjct: 448 LGQPTEVIEPGGA-TWRHTYDERGNVLTTTDPLGAETRYTYDESGHLVTVTDALGHSR-R 505 Query: 287 YYDPLQGRYITQ-DPIGLKGGWNFYQYPLNPVQYIDSMGLASKYGHLNNGGYGARPNKPP 345 G + D +G + V+ D +G ++ G G R + Sbjct: 506 VTSNAAGLPVAVTDELGHTTAARRDAFGR-VVEMTDPLGQTTRMGWTTEGKPTWRTHADG 564 Query: 346 TPDPSKLPDIAKQLRLPYPIDQAS-SAPNVFKTFFRALSPYDYTLYCRKWVKPNLTCTPQ 404 + L P + F P T + LT Sbjct: 565 RRESWTWDGEGNPLTHTDPAGNTTRHTATHFGVPATRTDPDGTTYAFAYDTELRLTGVTN 624 Query: 405 DDSQYPGMDTKTASDYLPQTNWPTTQLPPGYTCAEPYLFPDINKPDGPATAGIDDLGEIL 464 A + +T++ L + ++ L N D LG ++ Sbjct: 625 PQGLIWSYAYDEAGRLVTETDFNGRTLAYTHDASDG-LTSRTNGAGETLRFTRDALGRVI 683 Query: 465 AKMKQRTSRG 474 +QRT G Sbjct: 684 ---EQRTDTG 690 Score = 73.3 bits (178), Expect = 2e-11, Method: Composition-based stats. Identities = 40/248 (16%), Positives = 65/248 (26%), Gaps = 32/248 (12%) Query: 8 ARDAHYLYRYDRHGRLTEKTDLIPEG------------VIRTDDERTHRYHYDSQHRLVH 55 A + +D G TD D T+ + YD++ RL Sbjct: 562 ADGRRESWTWDGEGNPLTHTDPAGNTTRHTATHFGVPATRTDPDGTTYAFAYDTELRLTG 621 Query: 56 YTRTQYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVT-------WYGWD 108 T Q + Y YD GR V + + + T + D Sbjct: 622 VTNPQG----LIWSYAYDEAGRLVTETDFNGRTLAYTHDASDGLTSRTNGAGETLRFTRD 677 Query: 109 GDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVV 168 Q T T Y G+ L A E+ +R +L TL ++ + Sbjct: 678 ALGRVIEQRTDTGDTTTYAYGASGDLTHTANADAEV-AIERDALGRTLTETVNGRTTTYA 736 Query: 169 FPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDH 228 + P+ + S + + + + R R H Sbjct: 737 YDPLGRVVRRTTPSGLNSTWSYDAAGRPAGLGADAGSLAFAYDASGREIER--------H 788 Query: 229 RGLPLALV 236 G L Sbjct: 789 LGDGARLT 796 Score = 67.1 bits (162), Expect = 1e-09, Method: Composition-based stats. Identities = 39/284 (13%), Positives = 62/284 (21%), Gaps = 29/284 (10%) Query: 10 DAHYLYRYDRHGRLTEKTDLIPEGVIRTDD------------ERTHRYHYDSQHRLVHYT 57 A Y YD G L TD + T + T D+ R+V T Sbjct: 480 GAETRYTYDESGHLVTVTDALGHSRRVTSNAAGLPVAVTDELGHTTAARRDAFGRVVEMT 539 Query: 58 RTQYAEPLVESR------YLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDR 111 + + GRR + LT T + Sbjct: 540 DPLGQTTRMGWTTEGKPTWRTHADGRRESWTWDGEGNPLTHTDP---AGNTTRHTATHFG 596 Query: 112 LTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPP 171 + + D + + L V G + + ++ Sbjct: 597 VPATRTDPDGTTYAFAYDTELRLTGVTNPQGLIWSYAYDEAGRLVTETDFNGRTLAYTHD 656 Query: 172 VLVQMLDRLES-----EILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKI-HLYH 225 + R D + + + T D +T Sbjct: 657 ASDGLTSRTNGAGETLRFTRDALGRVIEQRTDTGDTTTYAYGASGDLTHTANADAEVAIE 716 Query: 226 CDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRL 269 D G L G T YD G ++ P L Sbjct: 717 RDALGRTLTET-VNGRTT-TYAYDPLGRVVRRTTPSGLNSTWSY 758 Score = 65.6 bits (158), Expect = 4e-09, Method: Composition-based stats. Identities = 38/277 (13%), Positives = 74/277 (26%), Gaps = 31/277 (11%) Query: 13 YLYRYDRHGRLTEKTDLIPEGVIRT------------DDERTHRYHYDSQHRLVHYTRTQ 60 + Y YD GRL +TD + T T R+ D+ R++ Q Sbjct: 630 WSYAYDEAGRLVTETDFNGRTLAYTHDASDGLTSRTNGAGETLRFTRDALGRVIE----Q 685 Query: 61 YAEPLVESRYLYDPLGRRVAKRVWRRERD-----LTGWMSLSRKPQVTWYGWDGDRLTTI 115 + + Y Y G E L ++ + + T Y +D Sbjct: 686 RTDTGDTTTYAYGASGDLTHTANADAEVAIERDALGRTLTETVNGRTTTYAYDPLGRVVR 745 Query: 116 QNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQ 175 + + + + + + + G LA S + + G + + Sbjct: 746 RTTPSGLNSTWSYDAAGRPAGLGADAGSLAFAYDASGREIERHLGDGARLTQSWDIDHRL 805 Query: 176 MLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLAL 235 L + R + + +++ + D G ++ Sbjct: 806 TEQTLSGRSSGSDRLLQHRTYAYREDGYLTEIRELSSGTRR-------FELDQVGRVTSV 858 Query: 236 VSTEGATEWCAEYDEWGNLLNEENPH-QLQQLIRLPG 271 YD GNL + P + G Sbjct: 859 --RAHGWTESYAYDSAGNLTSASAPAHETPGDREFTG 893 Score = 59.8 bits (143), Expect = 2e-07, Method: Composition-based stats. Identities = 33/268 (12%), Positives = 60/268 (22%), Gaps = 60/268 (22%) Query: 18 DRHGRLTEKTDLIPEGVI------------RTDDERTHRYHYDSQHRLVHYTRTQYAEP- 64 D GR+ E TD + + D R + +D + + +T Sbjct: 530 DAFGRVVEMTDPLGQTTRMGWTTEGKPTWRTHADGRRESWTWDGEGNPLTHTDPAGNTTR 589 Query: 65 ----------------LVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWD 108 + YD R + + Y +D Sbjct: 590 HTATHFGVPATRTDPDGTTYAFAYDTELRLTGVTNPQGL--------------IWSYAYD 635 Query: 109 GDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVV 168 + D Y + L GE + R +L ++Q + Sbjct: 636 EAGRLVTETDFNGRTLAYTHDASDGLTSRTNGAGETLRFTRDALGRVIEQRTDTGDTTTY 695 Query: 169 FPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDH 228 + + A + +E+ T + Y D Sbjct: 696 ----------------AYGASGDLTHTANADAEVAIERDALGRTLTETVNGRTTTYAYDP 739 Query: 229 RGLPLALVSTEGATEWCAEYDEWGNLLN 256 G + + G YD G Sbjct: 740 LGRVVRRTTPSG-LNSTWSYDAAGRPAG 766 >UniRef50_Q3K7R2 Putative insecticidal toxin n=2 Tax=Pseudomonas fluorescens Pf0-1 RepID=Q3K7R2_PSEPF Length = 944 Score = 193 bits (491), Expect = 1e-47, Method: Composition-based stats. Identities = 67/398 (16%), Positives = 107/398 (26%), Gaps = 49/398 (12%) Query: 3 PDNRIAR----------DAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERT--HRYHYDSQ 50 D R+ R + Y+YDR G +T D + YD+ Sbjct: 259 ADGRLHRHFAHKGSGPVLQDFEYKYDRMGNITCILDHAYTPTYFRNQRINGHRELTYDTL 318 Query: 51 HRLVHYTRTQYAEP----------------LVESRYLYDPLGRRVAKRVWRRERDLTGWM 94 +RL+ T A P Y YD V R T M Sbjct: 319 YRLIRATGYSDAAPSDNLGRPQPTAPDDRRNYVEHYKYDHGDNLVKTVHVRDGTSHTFEM 378 Query: 95 SLSRKPQV--------------TWYGWDGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETA 140 + + G+ + T L+ Sbjct: 379 CIDSASNRGVRCKPGDPPPDFSRLFDRAGNLQALQPGVLMHWNRRGELDKVT-LVDRNGG 437 Query: 141 TGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSEESRRWLASC 200 + + R S + + + V V+ L LE + + Sbjct: 438 SANDQEYYRYSQGERVYKRHDTHTTKVSHFHE-VRYLPGLEIRTRDNGEELHLINLSLAS 496 Query: 201 GLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENP 260 G V P A ++ DH G + + Y +G Sbjct: 497 GNAVCLHWKAGKPPRIDADQLRYTLADHLGSVSLELDRQAQIISREGYLSFGATAWMAAR 556 Query: 261 HQLQQLIR---LPGQQYDEESGLYYNRHRYYDPLQGRYITQDPIGLKGGWNFYQYP-LNP 316 ++ R G++ D + LYY RYY GR+++ DP G G N Y + NP Sbjct: 557 ALIEVDYRFLRYSGKEMDV-TRLYYYGARYYACWLGRWVSADPAGPVDGPNLYAFVGNNP 615 Query: 317 VQYIDSMGLASKYGHLNNGGYGARPNKPPTPDPSKLPD 354 V ++D G A + + S + Sbjct: 616 VNHVDVNGEAKVKWPTVADINAGVDRIIASQNASYSKN 653 >UniRef50_A9AKU8 Type VI secretion system Vgr family protein n=10 Tax=Burkholderia RepID=A9AKU8_BURM1 Length = 1981 Score = 193 bits (490), Expect = 1e-47, Method: Composition-based stats. Identities = 87/377 (23%), Positives = 123/377 (32%), Gaps = 44/377 (11%) Query: 15 YRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYA------------ 62 YRYD RLT+ +HYD L+ ++ Sbjct: 1521 YRYDALSRLTQVMAASGP----------EAFHYDPAGNLLAAAPSRDNMQAWKASGDRLL 1570 Query: 63 ------EPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTT-- 114 P + YD G R+A+ V + + + LT Sbjct: 1571 RFAPQTRPDRPVDFTYDGHGNRIARTVPLPPKPALTEAEKRSQRGTDNLLRVMEVLTGTP 1630 Query: 115 --IQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPV 172 + T Y+ LI +E A G ++ + +L + + GG+ + Sbjct: 1631 KYEEPSEVPEVTRYRYDGSHQLIAIEHADGARSEYEYDALGRRVAKHHTPAGGA-QQTTL 1689 Query: 173 LVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLP 232 + D + E+ R S E R V ++ + Y DH G P Sbjct: 1690 FMWDGDWMMQEVRTGRTSHEDRAVTY-----VPHPDHEGPLTRLADGQAWHYVTDHLGTP 1744 Query: 233 LALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEESGLYYNRHRYYDPLQ 292 L + W A+ +G + IR PGQ DEESGL+YNR RYYDP+ Sbjct: 1745 QELYDEQREVLWAADLSAYGRTARWLTR-VVDNPIRFPGQYRDEESGLHYNRFRYYDPMV 1803 Query: 293 GRYITQDPIGLKGGWNFYQYPLN-PVQYIDSMGLA----SKYGHLNNGGYGARPNKPPTP 347 GRYI QDPI GG NFY Y + P D GL + L G G Sbjct: 1804 GRYINQDPIAFDGGINFYSYADSAPNIAYDPKGLFVPLIAVASFLGRGALGGAVEIAMQG 1863 Query: 348 DPSKLPDIAKQLRLPYP 364 P Sbjct: 1864 AKQVFRQAKNNWVDGRP 1880 Score = 77.5 bits (189), Expect = 9e-13, Method: Composition-based stats. Identities = 36/278 (12%), Positives = 67/278 (24%), Gaps = 50/278 (17%) Query: 13 YLYRY---------DRHGRLTEKT--DLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQY 61 Y Y D G +T+ D T Y YD +L T Sbjct: 1143 TRYAYENGLPVARTDALGNVTKMQWDDAGQLVARTDCSGHTTTYDYDPFGQLTETTDALG 1202 Query: 62 -----------------AEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQ--- 101 + + YD GR +A W ++ Q Sbjct: 1203 QVSHHSGSVSARVTAVQPAGMGWWKVEYDEAGRAIAHTDPLERVTRVDWDGYGQRTQIVD 1262 Query: 102 ----VTWYGWDGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQ 157 + +D T + + T ++ S LI G + + + ++ Sbjct: 1263 PAGGTQQFRYDAIGRLTKLTNANQETTTFRYDSRNRLIEQTGFDGRRQSYRYNAAGELVE 1322 Query: 158 QSGGEDGGSVVFPPVLVQML--------DRLESEILADRVSEESRRWLASCGLTVEQMQN 209 + G + + D ++ D ++ G + Sbjct: 1323 RIDHGQDGQIATHVTYDVLGRPVERRSSDGSQASYRYDERGLLTQAQAIVPGRAPVHVTY 1382 Query: 210 QMDPVYTPARKIHLYHCDHRGLPLALV---STEGATEW 244 + D ++ H G L G +W Sbjct: 1383 EYDAAGRRTAEVQA----HHGRVWRLTHGVDAIGNRDW 1416 Score = 68.7 bits (166), Expect = 5e-10, Method: Composition-based stats. Identities = 51/278 (18%), Positives = 80/278 (28%), Gaps = 32/278 (11%) Query: 9 RDAHYLYRYDRHGRLTEKTDLIPEGVI---------------RTDDERTHRYHYDSQHRL 53 YRY+ G L E+ D +G I R+ D Y YD + L Sbjct: 1306 DGRRQSYRYNAAGELVERIDHGQDGQIATHVTYDVLGRPVERRSSDGSQASYRYDERGLL 1365 Query: 54 VHYTRTQYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLT 113 V Y YD GRR A+ R + W T Sbjct: 1366 TQAQAIVPGRAPVHVTYEYDAAGRRTAEVQAHHGRVWRLTHGVDAIGNRDW--------T 1417 Query: 114 TIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVL 173 + + + + Y + + LA +R +L ++++ G + Sbjct: 1418 HVPDIGSLVWQRY---GSGHVHGILLDEHPLASFERDALHREIRRTQGPASHHFGYGANG 1474 Query: 174 VQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPL 233 + + R ++ R E R W A Q+ D Y D Sbjct: 1475 LLAVHRWQNLDERGRSLEHPRPWRAWAYDDAGQLTTLDDAWRDQKA----YRYDALSRLT 1530 Query: 234 ALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRLPG 271 +++ G YD GNLL Q + G Sbjct: 1531 QVMAASGP--EAFHYDPAGNLLAAAPSRDNMQAWKASG 1566 Score = 68.7 bits (166), Expect = 5e-10, Method: Composition-based stats. Identities = 48/267 (17%), Positives = 71/267 (26%), Gaps = 61/267 (22%) Query: 6 RIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDER------------------------ 41 + D + YD HG +T +P T+ E+ Sbjct: 1575 QTRPDRPVDFTYDGHGNRIARTVPLPPKPALTEAEKRSQRGTDNLLRVMEVLTGTPKYEE 1634 Query: 42 ------THRYHYDSQHRLVHYTRTQYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMS 95 RY YD H+L+ A S Y YD LGRRVAK Sbjct: 1635 PSEVPEVTRYRYDGSHQLIAIEHADGA----RSEYEYDALGRRVAKHHT----------P 1680 Query: 96 LSRKPQVTWYGWDGD------RLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQR 149 Q T + WDGD R ++ + + P PL R+ T Sbjct: 1681 AGGAQQTTLFMWDGDWMMQEVRTGRTSHEDRAVTYVPHPDHEGPLTRLADGQAWHYVTDH 1740 Query: 150 RSLADTLQQSGGED---------GGSVVFPPVLVQMLDRLESEILADRVSEESRRWLASC 200 L E G + + +V R + + R+ Sbjct: 1741 LGTPQELYDEQREVLWAADLSAYGRTARWLTRVVDNPIRFPGQYRDEESGLHYNRFRYYD 1800 Query: 201 GLTVEQMQNQMDPVYTPARKIHLYHCD 227 + DP+ + D Sbjct: 1801 PMVGR--YINQDPIAFDGGINFYSYAD 1825 Score = 67.5 bits (163), Expect = 1e-09, Method: Composition-based stats. Identities = 61/467 (13%), Positives = 106/467 (22%), Gaps = 58/467 (12%) Query: 2 WPDNRIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQY 61 W + D GR+T G Y YD LV T + Sbjct: 905 WLETVRNNVHTVRCALDDAGRITSVLLDQGVGNQPL---HLTSYVYDEHGDLVEATDREN 961 Query: 62 AEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKP----QVTWYG--WDGDRLTTI 115 + RY YD + S + Y DG R+ Sbjct: 962 ----LTWRYGYDNH--LLTTYRTPAGATHVSEWSDDTPNAYCLRTYAYTEGADGQRVV-- 1013 Query: 116 QNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQ 175 + + RV G + L + P Sbjct: 1014 -----TREMRFDYLPSLRATRVTDGLGHTTEYHYNGLW----------AVEKIVHPDGSV 1058 Query: 176 MLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLAL 235 + ++ R + +DP R + H LP + Sbjct: 1059 EQTHFDETGSVAGYTDALGRTTRIVNDARGNPTSIIDPAGNVTRISYGEHN----LPEQI 1114 Query: 236 VSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEESGLYYNRHRYYDPLQGRY 295 G W YD G+L +E +P + N + G+ Sbjct: 1115 TDPAGQI-WQRGYDAHGHLTSETDPLGNVTRYAYENGLPVARTDALGNVTKMQWDDAGQL 1173 Query: 296 ITQDPIGLKGGWNFYQYPLNPVQYIDSMGLASKYGHLNNGGYGARPNKPPTPDPSKLPDI 355 + + G Y Y D G ++ + + + Sbjct: 1174 VAR--TDCSGHTTTYDY--------DPFGQLTETTDALGQVSHHSGSVSARVTAVQPAGM 1223 Query: 356 AKQLRLPYPIDQASSAPNVFKTFFRA-----------LSPYDYTLYCRKWVKPNLTCTPQ 404 +A + + + R + P T R LT Sbjct: 1224 GWWKVEYDEAGRAIAHTDPLERVTRVDWDGYGQRTQIVDPAGGTQQFRYDAIGRLTKLTN 1283 Query: 405 DDSQYPGMDTKTASDYLPQTNWPTTQLPPGYTCAEPYLFPDINKPDG 451 + + + + + QT + + Y A + + DG Sbjct: 1284 ANQETTTFRYDSRNRLIEQTGFDGRRQSYRYNAAGELVERIDHGQDG 1330 Score = 67.1 bits (162), Expect = 2e-09, Method: Composition-based stats. Identities = 27/179 (15%), Positives = 53/179 (29%), Gaps = 28/179 (15%) Query: 10 DAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESR 69 +RYD GRLT+ T+ ++ T + YDS++RL+ T Sbjct: 1265 GGTQQFRYDAIGRLTKLTNA---------NQETTTFRYDSRNRLIEQTGFDG----RRQS 1311 Query: 70 YLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQPG 129 Y Y+ G V + ++ + T +D + Q Y+ Sbjct: 1312 YRYNAAGELVERIDHGQDGQIA-----------THVTYDVLGRPVERRSSDGSQASYRYD 1360 Query: 130 SFTPLIR----VETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEI 184 L + V + + + G + + +R + + Sbjct: 1361 ERGLLTQAQAIVPGRAPVHVTYEYDAAGRRTAEVQAHHGRVWRLTHGVDAIGNRDWTHV 1419 >UniRef50_B1C8M0 Putative uncharacterized protein n=2 Tax=Anaerofustis stercorihominis DSM 17244 RepID=B1C8M0_9FIRM Length = 3037 Score = 193 bits (489), Expect = 2e-47, Method: Composition-based stats. Identities = 72/337 (21%), Positives = 122/337 (36%), Gaps = 32/337 (9%) Query: 11 AHYLYRYDRHGR-LTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQ--YAEPLVE 67 Y + YD++G LTE+ + Y YD RL T + + Sbjct: 2641 EEYKFTYDKNGNILTEEIYNDYLTEAQDKIHVVKNYTYDELGRLTRVDVTDKLVNDSVST 2700 Query: 68 SRYLYDPLGRRVAKRVWRRERDLTGWMSL------SRKPQVTWYGWDGDRLTTIQNDRTR 121 + Y YD +G R++K + D S + + Y +D + T + ++ Sbjct: 2701 TSYTYDKVGNRLSKTRDGAKEDYEYNDLNELLKVKSGENIIKEYSYDANGNTKKEVSGSK 2760 Query: 122 IQTIYQPGSFTPLIRVETATGELAK----TQRRSLADTLQQSGGEDGGSVVFPPVLVQML 177 + Y + + E GE + +++ + V V Sbjct: 2761 ERN-YSYDISNQMTKYEAKDGEKVTLTQNNTYNYVGQRIRKEVIDSSTENVQTRVNNYYY 2819 Query: 178 DRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVS 237 + E + D ++ + T+ NQ+ ++ + D RG +V Sbjct: 2820 NGEEILYVTDINDKKITENVLDTDFTLRFDNNQLS--------VYTLNSDGRGSTSVVVD 2871 Query: 238 TEGATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEESGLYYNRHRYYDPLQGRYIT 297 +YDE+G+ + I GQ YD+E+G YY RYY P +GR+IT Sbjct: 2872 AANKGVTGYKYDEFGST-ETIGNAIFENEICYTGQVYDKETGDYYYNARYYSPDEGRFIT 2930 Query: 298 QDPIGLKGG------WNFYQYP-LNPVQYIDSMGLAS 327 D +GG N Y Y NP+++ID G S Sbjct: 2931 VD--TYRGGSNDPLSLNLYTYCLNNPIRFIDPSGHKS 2965 Score = 69.1 bits (167), Expect = 3e-10, Method: Composition-based stats. Identities = 29/252 (11%), Positives = 61/252 (24%), Gaps = 31/252 (12%) Query: 8 ARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVE 67 Y YD +G + + + + YD L+ + Sbjct: 2034 TTLEQNKYSYDENGNILMEEETVSGDKTIN--------TYDEDGELLSEENITAGNKISS 2085 Query: 68 SRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQ 127 + Y YD G +++ + T +D T + D T+Y+ Sbjct: 2086 TSYEYDNKGNTISETTKNASGSE---------ERTTNSEYDKFGRLTKETDAKGYSTMYE 2136 Query: 128 PGSFTPLIRVETA------------TGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQ 175 + +I+ + R + +L EDG + + + Sbjct: 2137 YDGYDRVIKTTKNSLTDKEIADGGSNKAIVTENRYNKNGSLVYEKKEDGSEITYEYDNMN 2196 Query: 176 MLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLAL 235 R E+ + S + + + G + + D Sbjct: 2197 RAVRTET-AKNGQTSVMTTSYGYAPGNETNFIMGNEENKNYDFLYKETSTTDGIESVSY- 2254 Query: 236 VSTEGATEWCAE 247 G Sbjct: 2255 TDAGGQNVKEYS 2266 Score = 69.1 bits (167), Expect = 4e-10, Method: Composition-based stats. Identities = 48/296 (16%), Positives = 83/296 (28%), Gaps = 41/296 (13%) Query: 3 PDNRIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYA 62 N+I+ Y YD G +T G YD RL T + Sbjct: 2079 AGNKIS---STSYEYDNKGNTISETTKNASGSEERTTNSE----YDKFGRLTKETDAKGY 2131 Query: 63 EPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRI 122 + Y YD R + K D S K VT ++ + + Sbjct: 2132 STM----YEYDGYDRVI-KTTKNSLTDKEIADGGSNKAIVTENRYNKNGSLVYEKKEDGS 2186 Query: 123 QTIYQPGSFTPLIRVETATGE-----LAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQML 177 + Y+ + +R ETA +T G E+ + F Sbjct: 2187 EITYEYDNMNRAVRTETAKNGQTSVMTTSYGYAPGNETNFIMGNEENKNYDFLYKETSTT 2246 Query: 178 DRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYT----PARKIHL-------YHC 226 D +ES D + + + + T + NQ + T + Y+ Sbjct: 2247 DGIESVSYTDAGGQNVKEY-SRGNTTYNEYDNQGQLIKTFNIEDNADVKYGKLIMNLYNE 2305 Query: 227 DHRGLPLAL------------VSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRLP 270 D + + + +YD+ GN ++E +P + Sbjct: 2306 DGQQTCTIENPVYDAENKVYSADDQKSLVTTTKYDKLGNKISETDPMGNETKYGYT 2361 Score = 52.5 bits (124), Expect = 3e-05, Method: Composition-based stats. Identities = 38/300 (12%), Positives = 74/300 (24%), Gaps = 48/300 (16%) Query: 7 IARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLV 66 + + +Y YD G + + R YD ++RLV + P Sbjct: 2471 VKKKEDIVYTYDLSGNVVKVVQSKYNEEGEDLSVRYKVNAYDGRNRLVSSYEGEKETPSE 2530 Query: 67 ES--RYLYDPLGRRVAKRVWRRERDL-------------------TGWMSLSRKPQVTWY 105 RY Y+ + E T + + Y Sbjct: 2531 NERLRYSYNDKNELIKVTYPNFETGTKEVIYEYNDKGKVMNIKALTSSSQGEKLVRQYTY 2590 Query: 106 GWDGDRLT---TIQNDRTRIQTI---YQPGSFTPLIRVETATGELAK-------TQRRSL 152 G+ D I Y+ F + ++ A + + Sbjct: 2591 SPKGNVENIKDYTGFDAGNDNYILRSYEYDLFDRVTHIKYANSDDPEKSKEEYKFTYDKN 2650 Query: 153 ADTLQQSGGEDGGS-------VVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVE 205 + L + D + VV ++ ++ V++ + Sbjct: 2651 GNILTEEIYNDYLTEAQDKIHVVKNYTYDELGRLTRVDVTDKLVNDSVSTTSYTYDKVGN 2710 Query: 206 QMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQ 265 ++ D Y + L + S E YD GN E + + + Sbjct: 2711 RLSKTRDGAKED------YEYNDLNELLKVKSGE-NIIKEYSYDANGNTKKEVSGSKERN 2763 Score = 51.7 bits (122), Expect = 6e-05, Method: Composition-based stats. Identities = 32/242 (13%), Positives = 69/242 (28%), Gaps = 40/242 (16%) Query: 18 DRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQ--HRLVHYTRTQYAEPLVESRYLYDPL 75 D G + E+T ++ +Y Y+S+ T L +++Y YD Sbjct: 1997 DTKGNVLEET---------ANNGSVTKYEYNSEEFDADTEITTLD-GTTLEQNKYSYDEN 2046 Query: 76 GRRV--AKRVWRRERDLTG----------WMSLSRKPQVTWYGWD--GDRLTTIQNDRTR 121 G + + V + T ++ K T Y +D G+ ++ + + Sbjct: 2047 GNILMEEETVSGDKTINTYDEDGELLSEENITAGNKISSTSYEYDNKGNTISETTKNASG 2106 Query: 122 ---IQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLD 178 T + F L + A G + ++ + + + + Sbjct: 2107 SEERTTNSEYDKFGRLTKETDAKGYSTMYEYDGYDRVIKTTKNSLTDKEIADGGSNKAI- 2165 Query: 179 RLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVST 238 +E ++ + N V T K G + ++ Sbjct: 2166 --VTENRYNKNGSLVYEKKEDGSEITYEYDNMNRAVRTETAK--------NGQTSVMTTS 2215 Query: 239 EG 240 G Sbjct: 2216 YG 2217 Score = 47.5 bits (111), Expect = 0.001, Method: Composition-based stats. Identities = 22/162 (13%), Positives = 44/162 (27%), Gaps = 8/162 (4%) Query: 109 GDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAK---TQRRSLADTLQQSGGEDGG 165 G+ L N+ + + Y F + T G + + L + G Sbjct: 2000 GNVLEETANNGSVTKYEYNSEEFDADTEITTLDGTTLEQNKYSYDENGNILMEEETVSGD 2059 Query: 166 SVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYH 225 + L E+ +++S S + E +N + Sbjct: 2060 KTINTYDEDGELLSEENITAGNKISSTSYEYDNKGNTISETTKNASGSEERTTNSEY--- 2116 Query: 226 CDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLI 267 D G +G + EYD + ++ + I Sbjct: 2117 -DKFGRLTKETDAKGYST-MYEYDGYDRVIKTTKNSLTDKEI 2156 Score = 42.9 bits (99), Expect = 0.030, Method: Composition-based stats. Identities = 22/219 (10%), Positives = 56/219 (25%), Gaps = 23/219 (10%) Query: 72 YDPLGRRVAKRVWRRE---RDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQ- 127 Y+ G + + + + + + V Y + + + T Y Sbjct: 1927 YNVDGNIIYSKDSKGNEVISEYENGLEVKTTKTVDTYTLN-NGTVQKGSKEMVTTTKYDS 1985 Query: 128 ----------PGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQML 177 + ++ G + K + S G+ + Sbjct: 1986 IPDNNSLACIADTKGNVLEETANNGSVTKYEYNSEEFDADTEITTLDGTTLEQNKYSYDE 2045 Query: 178 DRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALV- 236 + +++ G + + + Y D++G ++ Sbjct: 2046 NGNILMEEETVSGDKTINTYDEDGELLSEENITAGNKISSTS----YEYDNKGNTISETT 2101 Query: 237 -STEG--ATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQ 272 + G +EYD++G L E + + G Sbjct: 2102 KNASGSEERTTNSEYDKFGRLTKETDAKGYSTMYEYDGY 2140 >UniRef50_B6A882 YenC2 n=1 Tax=Yersinia sp. MH-1 RepID=B6A882_9ENTR Length = 970 Score = 192 bits (488), Expect = 2e-47, Method: Composition-based stats. Identities = 62/411 (15%), Positives = 119/411 (28%), Gaps = 50/411 (12%) Query: 8 ARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERT--HRYHYDSQHRLVHYTRTQYAEPL 65 Y YD G + T+ E + + + Y YDS ++LV + + A Sbjct: 327 KVLQDLRYEYDPVGNVLSITNDAEETRFWRNQKVVPENAYRYDSLYQLVSASGREVAGAG 386 Query: 66 VESRY----------------------LYDPLGR--RVAKRVWRRERDLTGWMSLSRKPQ 101 + YD G R+ + T +++S + Sbjct: 387 QQGSDLPSPLVPLPSDSSVYTNYTRTYTYDSAGNLMRIRHSAPATNNNYTLNITVSERSN 446 Query: 102 V--------------TWYGWDGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKT 147 + G + Q + + + R ETA Sbjct: 447 RGVMSSLTENPADVDALFTASGSQKCLQQGQSLIWTPRGELRTVLLVARGETADDSE-SY 505 Query: 148 QRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSEESRRWL----ASCGLT 203 + + + + + + + + E+ + + A Sbjct: 506 RYDGSSQRILKISSQQTNHSARVQRALYLPGLEWRTMTGGVAEAENLQVICIGEAGRAQV 565 Query: 204 VEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQL 263 P +I + + V +G EY +G + Sbjct: 566 RVLHWESGKPDGIINDQIRWSYDNLTCSSGLEVDGDGLVISMEEYYPYGGTAVWAARSHI 625 Query: 264 QQLI---RLPGQQYDEESGLYYNRHRYYDPLQGRYITQDPIGLKGGWNFYQYP-LNPVQY 319 + R G++ D +GLYY RYY P GR+++ DP G G N Y+ NP++ Sbjct: 626 ETAYKTVRYSGKERDA-TGLYYYGFRYYQPWAGRWLSADPAGTVDGLNLYRMVRNNPLRL 684 Query: 320 IDSMGLASKYGHLNNGGYGARPNKPPTPDPSKLPDIAKQLRLPYPIDQASS 370 D G+A + +R +++ + +R Y S+ Sbjct: 685 TDPDGMAPLDWLDLDTTNASRDIVKAIYQLNQIDGPHRGVRDTYQRMTEST 735 >UniRef50_D1JME6 Rhs family protein n=22 Tax=Bacteroides RepID=D1JME6_9BACE Length = 1494 Score = 192 bits (488), Expect = 2e-47, Method: Composition-based stats. Identities = 85/384 (22%), Positives = 125/384 (32%), Gaps = 41/384 (10%) Query: 13 YLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYLY 72 + YD GRL + RY + RL+ ++ E+RY Y Sbjct: 1025 RSFAYDDIGRLV-----DARTRKDSRTRHMRRYRWGVADRLLSVEDSRRG----ETRYSY 1075 Query: 73 ---------------------DPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDR 111 D G R R L G Y DG+ Sbjct: 1076 TPTGQLERAEYPDGREQWRKSDQTGNLYPDPDMRLRRYLGGGRLEQDGEWHCEYDADGN- 1134 Query: 112 LTTIQNDRTRI------QTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGG 165 LT R + Y+ + L +V + +L L +S G Sbjct: 1135 LTERYLGTGRWLDGKKDRWRYRWNADGSLAKVVRPDKREVEFTYDALGRRLSKSFGTTVT 1194 Query: 166 SVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYH 225 V+ + + E + + + + + + + Sbjct: 1195 RWVWNGNVPLHQWKQHREYSVMEDRWNTDTEHRDMTVWLFDEDSFVPVAMIKEGRSYSIL 1254 Query: 226 CDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEESGLYYNRH 285 D G P TEG W D GN++ E + GQ YD E+GL YNR Sbjct: 1255 TDQLGTPTEAYDTEGNEVWSRVLDMDGNVIEETGNKGMV-PFLFQGQYYDRETGLAYNRF 1313 Query: 286 RYYDPLQGRYITQDPIGLKGG-WNFYQYPLNPVQYIDSMGLASKYGHLNNGGYGARPNKP 344 RYY P G Y++QDPIGL GG N Y Y + +IDS GL Y +N+ G + Sbjct: 1314 RYYSPKMGVYVSQDPIGLGGGILNLYGYVDDTNVWIDSFGLDWNYVLINSKGNVFYSGRA 1373 Query: 345 PTPDPSKLPDIAKQLRLPYPIDQA 368 D + L D+A++ D Sbjct: 1374 S--DNANLSDVARRHAGTKGADGT 1395 Score = 72.9 bits (177), Expect = 2e-11, Method: Composition-based stats. Identities = 59/317 (18%), Positives = 90/317 (28%), Gaps = 50/317 (15%) Query: 7 IARDAHYLYRYDRHGRLTEKTDLIPE-----------GVIRTDDERTHRYHYDSQHRLVH 55 + + YDR G L +T+ ++ R YD H L Sbjct: 678 TPDGGTWEFGYDRSGNLVSRTNPEGAVTRMTYRNGAVASVKDPYGVVTRLAYDRFHNLTE 737 Query: 56 YTRTQYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYG-------WD 108 + ++ L Y YD LGR V+ + + + R +V + +D Sbjct: 738 ASDSRGNTSL----YGYDLLGRCVSVTNPKGAVQKREYDPVGRVVRVLDFDGNDIRLSYD 793 Query: 109 GDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVV 168 G T D Y L R R + L++ E S Sbjct: 794 GIDNLTEYRDN-VQHVEYGYSGMWKLTR--RRDHRGVVNFRYDREERLRRVTNERLQSYE 850 Query: 169 FPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDH 228 F LD + + R +L G V + P+ Y D Sbjct: 851 FA------LDAVGNVTAEKGFDGAVRHYLRDRGGRVVR-------ETLPSGTEREYGYDA 897 Query: 229 RGLPLAL-VSTEGATEWCAEYDEWGNL----LNEENPHQLQQLIRLPGQQ-YDEESGLYY 282 + T G + Y G L E + LP ++ D + L Sbjct: 898 CSRVTRVSYPTAGDPDQTYAYGLSGRLVQASRGESTVEFAYNSLGLPTRETADGNTIL-- 955 Query: 283 NRHRYYDPLQGRYITQD 299 R YD GR +T D Sbjct: 956 ---RTYD-HTGRILTLD 968 Score = 71.8 bits (174), Expect = 6e-11, Method: Composition-based stats. Identities = 39/235 (16%), Positives = 72/235 (30%), Gaps = 17/235 (7%) Query: 4 DNRIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAE 63 R+ +D + YD G LTE+ + G + RY +++ L R Sbjct: 1116 GGRLEQDGEWHCEYDADGNLTER--YLGTGRWLDGKKDRWRYRWNADGSLAKVVRPD--- 1170 Query: 64 PLVESRYLYDPLGRRVAKRVWRRERD--LTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTR 121 E + YD LGRR++K G + L + Q Y DR T R Sbjct: 1171 -KREVEFTYDALGRRLSKSFGTTVTRWVWNGNVPLHQWKQHREYSVMEDRWNTDTEHRDM 1229 Query: 122 IQTIYQPGSFTPLIRVETATG--------ELAKTQRRSLADTLQQSGGEDGGSVVFPPVL 173 ++ SF P+ ++ + + + + G+V+ Sbjct: 1230 TVWLFDEDSFVPVAMIKEGRSYSILTDQLGTPTEAYDTEGNEVWSRVLDMDGNVIEETGN 1289 Query: 174 VQMLDRL-ESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCD 227 M+ L + + R+ + + ++ Y D Sbjct: 1290 KGMVPFLFQGQYYDRETGLAYNRFRYYSPKMGVYVSQDPIGLGGGILNLYGYVDD 1344 Score = 71.8 bits (174), Expect = 6e-11, Method: Composition-based stats. Identities = 38/271 (14%), Positives = 73/271 (26%), Gaps = 21/271 (7%) Query: 10 DAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESR 69 LYRYDR G T+ +D V + + ++R V T Sbjct: 635 GNSTLYRYDRWGNCTDSSDPCGGSVSAVYPAKGNL-----RNRPVSVTTPDGG----TWE 685 Query: 70 YLYDPLGRRVAKRVWRRERDLTGWMSLSRK------PQVTWYGWDGDRLTTIQNDRTRIQ 123 + YD G V++ + + + VT +D T +D Sbjct: 686 FGYDRSGNLVSRTNPEGAVTRMTYRNGAVASVKDPYGVVTRLAYDRFHNLTEASDSRGNT 745 Query: 124 TIYQPGSFTPLIRVETATGELAKTQRRSLAD--TLQQSGGEDGGSVVFPPVLVQMLDRLE 181 ++Y + V G + K + + + G D + Sbjct: 746 SLYGYDLLGRCVSVTNPKGAVQKREYDPVGRVVRVLDFDGNDIRLSYDGIDNLTEYRDNV 805 Query: 182 SEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPAR---KIHLYHCDHRGLPLALVST 238 + V ++ + + + + + D G A Sbjct: 806 QHVEYGYSGMWKLTRRRDHRGVVNFRYDREERLRRVTNERLQSYEFALDAVGNVTAEKGF 865 Query: 239 EGATEWCAEYDEWGNLLNEENPHQLQQLIRL 269 +GA D G ++ E P ++ Sbjct: 866 DGAVR-HYLRDRGGRVVRETLPSGTEREYGY 895 Score = 65.2 bits (157), Expect = 5e-09, Method: Composition-based stats. Identities = 38/270 (14%), Positives = 64/270 (23%), Gaps = 35/270 (12%) Query: 9 RDAHYLYRYDRHGRLTE------------KTDLIPEGVIRTDDERTHRYHYDSQHRLVHY 56 R Y + D G +T + Y YD+ R+ Sbjct: 845 RLQSYEFALDAVGNVTAEKGFDGAVRHYLRDRGGRVVRETLPSGTEREYGYDACSRVTRV 904 Query: 57 TRTQYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQ 116 + +P Y Y GR V + T + + T DG+ + Sbjct: 905 SYPTAGDPDQT--YAYGLSGRLVQ----ASRGESTVEFAYNSLGLPTRETADGNTILRT- 957 Query: 117 NDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLAD-TLQQSGGEDGGSVVFPPVLVQ 175 ++ +++ G R + + G Sbjct: 958 -----------YDHTGRILTLDSTAGASLHYTRNGYGELEGFTATGGSDADGAGSWESAH 1006 Query: 176 MLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLAL 235 D L E+ R + + + + D R+ D Sbjct: 1007 RHDTLGFEVERILPGGIVRSFAYDDIGRLVDARTRKDSRTRHMRRYRWGVADRLLSVED- 1065 Query: 236 VSTEGATEWCAEYDEWGNLLNEENPHQLQQ 265 S G T Y G L E P +Q Sbjct: 1066 -SRRGET--RYSYTPTGQLERAEYPDGREQ 1092 Score = 64.8 bits (156), Expect = 6e-09, Method: Composition-based stats. Identities = 35/287 (12%), Positives = 70/287 (24%), Gaps = 34/287 (11%) Query: 14 LYRYDRHGRLTEKTDLIPEGVIR-----------TDDERTHRYHYDSQHRLVHYTRTQYA 62 Y YD G +T + + + + + + YD T Sbjct: 513 SYEYDADGNMTLQRNAAGDVMTYEYAGRLIVKETWRNGLAWYFEYDGTGVGSRCVHTWGD 572 Query: 63 EPLVESRYLY--------DPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTT 114 + + R + D G R + + + + Y D RL Sbjct: 573 GGIYDHRLTFREGVTEVLDSHGELT--VYHHRGGLVWKKVDANGGEHLWRYD-DSRRLLA 629 Query: 115 IQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQR---RSLADTLQQSGGEDGGSVVFPP 171 + +Y+ + G +L + DGG+ F Sbjct: 630 QTDPLGNST-LYRYDRWGNCTDSSDPCGGSVSAVYPAKGNLRNRPVSVTTPDGGTWEFGY 688 Query: 172 VLVQML-------DRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLY 224 L + + + + + LY Sbjct: 689 DRSGNLVSRTNPEGAVTRMTYRNGAVASVKDPYGVVTRLAYDRFHNLTEASDSRGNTSLY 748 Query: 225 HCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRLPG 271 D G +++ + +GA EYD G ++ + + G Sbjct: 749 GYDLLGRCVSVTNPKGA-VQKREYDPVGRVVRVLDFDGNDIRLSYDG 794 Score = 60.2 bits (144), Expect = 2e-07, Method: Composition-based stats. Identities = 41/270 (15%), Positives = 78/270 (28%), Gaps = 27/270 (10%) Query: 9 RDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVE- 67 + Y + G L TD + D R+ R++ EP E Sbjct: 458 NGLGIRFDYTKEGLLRSITDSAGRRLRVEHDTRS--------GRILEICGPHPEEPEKEI 509 Query: 68 --SRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTW------YGWDGDRLTTIQNDR 119 + Y YD G +R + + + + +DG + + Sbjct: 510 TLASYEYDADGNMTLQRNAAGDVMTYEYAGRLIVKETWRNGLAWYFEYDGTGVGSRCVHT 569 Query: 120 TRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDR 179 IY E T + + +GG ++ + L Sbjct: 570 WGDGGIYDHRLTFREGVTEVLDSHGELTVYHHRGGLVWKKVDANGGEHLWRYDDSRRL-L 628 Query: 180 LESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTE 239 +++ L + RW + DP ++ + R P+++ + + Sbjct: 629 AQTDPLGNSTLYRYDRW--------GNCTDSSDPCGGSVSAVYPAKGNLRNRPVSVTTPD 680 Query: 240 GATEWCAEYDEWGNLLNEENPHQLQQLIRL 269 G W YD GNL++ NP + Sbjct: 681 GG-TWEFGYDRSGNLVSRTNPEGAVTRMTY 709 Score = 57.5 bits (137), Expect = 1e-06, Method: Composition-based stats. Identities = 40/313 (12%), Positives = 69/313 (22%), Gaps = 63/313 (20%) Query: 4 DNRIAR-----DAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTR 58 R+ R Y YD R+T + T + Y Y RLV +R Sbjct: 877 GGRVVRETLPSGTEREYGYDACSRVTRVS-------YPTAGDPDQTYAYGLSGRLVQASR 929 Query: 59 ----------------TQYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQV 102 + A+ R YD GR + Sbjct: 930 GESTVEFAYNSLGLPTRETADGNTILR-TYDHTGRILTLDSTAGASLHYTRNGYGELEG- 987 Query: 103 TWYGWDGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGE 162 + G + + ++ ++ + + G + + L + Sbjct: 988 --FTATG---GSDADGAGSWESAHRHDTLGFEVERILPGGIVRSFAYDDIG-RLVDARTR 1041 Query: 163 DGGSVVFPPVLVQ----------MLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMD 212 R E+ + R + + Sbjct: 1042 KDSRTRHMRRYRWGVADRLLSVEDSRRGETRYSYTPTGQLERAEYPDGREQWRKSDQTGN 1101 Query: 213 PVYTPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQ 272 P ++ Y G E W EYD GNL G+ Sbjct: 1102 LYPDPDMRLRRY----LGGGRLEQDGE----WHCEYDADGNLTE---------RYLGTGR 1144 Query: 273 QYDEESGLYYNRH 285 D + + R Sbjct: 1145 WLDGKKDRWRYRW 1157 >UniRef50_Q10YX3 YD repeat protein n=1 Tax=Trichodesmium erythraeum IMS101 RepID=Q10YX3_TRIEI Length = 3193 Score = 192 bits (488), Expect = 2e-47, Method: Composition-based stats. Identities = 80/393 (20%), Positives = 135/393 (34%), Gaps = 37/393 (9%) Query: 3 PDNRIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYA 62 DN++ + + Y YD GR + L + Y YD+ +L+ Sbjct: 1978 ADNQVN--SQFEYSYDDLGRRSTAKTLDGD----------WEYGYDAVGQLISAKFDSSN 2025 Query: 63 E--PLVESRYLYDPLGRRVAKRVWRRERDL-TGWMSLSRKPQVTWYGWDGDRLTTIQNDR 119 P Y YD +G R++ +V + D T ++ + Y +D D + + Sbjct: 2026 SEIPDQNLSYTYDAVGNRISTKVNGQNTDYETNNLNQYGQVGDIEYEYDADGNLIEKTEG 2085 Query: 120 TRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDR 179 + Y+ L++V G + + L + + + + P + Sbjct: 2086 GNV-WQYEYNVENRLVKVVEPDGIETEYEYDVLGNRIATVYDGNRTEYLVDPFGFGNVVG 2144 Query: 180 LESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTE 239 + + R++ GL + Y + G + L + Sbjct: 2145 EFQD------GDLVARYVHGLGLVSRVDSDGEGN---------FYDFNAIGSTVGLSDGQ 2189 Query: 240 GATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQ--QYDEESGLYYNRHRYYDPLQGRYIT 297 G Y +G + E+ Q+ GQ +E +GL + R R+YD GR+++ Sbjct: 2190 GDYVNRYHYAPFGKDVFEQ--EQVANQFEFVGQFGVMEEANGLDFMRARFYDGETGRFVS 2247 Query: 298 QDPIGLKGGW-NFYQYPLN-PVQYIDSMGLASKYGHLNNGGYGARPNKPPTPDPSKLPDI 355 DPIGL GG N Y+Y N PV YID GL SK + + R K + L + Sbjct: 2248 MDPIGLNGGDENLYRYVGNGPVDYIDPEGLKSKDKNDSIKRMIERAKKLREREKKYLGNG 2307 Query: 356 AKQLRLPYPIDQASSAPNVFKTFFRALSPYDYT 388 K L K R D Sbjct: 2308 GKSGLLTRGAAIDMVNDKNLKDSERGKRAKDLD 2340 Score = 79.1 bits (193), Expect = 4e-13, Method: Composition-based stats. Identities = 39/293 (13%), Positives = 70/293 (23%), Gaps = 56/293 (19%) Query: 6 RIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQ----- 60 + Y YD G L + TD E V+ YD RL T Sbjct: 1849 QFGNGDSLNYEYDDRGNLIKVTDESGETVMV----------YDDADRLTKITYPTERWLE 1898 Query: 61 -----------YAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDG 109 + +Y YD +GR E + Y +D Sbjct: 1899 FTYENNRRSSMVDDSGGIVKYGYDGVGRLRKLTDGENEL-------------IVQYSYDN 1945 Query: 110 DRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGE-----LAKTQRRSLADTLQQSGGEDG 164 + + T+Y+ L+++ + + L + Sbjct: 1946 IGRLAKEENGNGTATVYEYDDVGQLVKLTNFDADNQVNSQFEYSYDDLGRRSTAKTLDGD 2005 Query: 165 GSVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLY 224 + V + + +S S + A ++ Q T + Sbjct: 2006 WEYGYDAVGQLISAKFDSSNSEIPDQNLSYTYDAVGNRISTKVNGQNTDYETNNLNQY-- 2063 Query: 225 HCDHRGLPLALVSTEGAT--------EWCAEYDEWGNLLNEENPHQLQQLIRL 269 G +G W EY+ L+ P ++ Sbjct: 2064 --GQVGDIEYEYDADGNLIEKTEGGNVWQYEYNVENRLVKVVEPDGIETEYEY 2114 Score = 68.3 bits (165), Expect = 6e-10, Method: Composition-based stats. Identities = 37/273 (13%), Positives = 70/273 (25%), Gaps = 47/273 (17%) Query: 10 DAHYLYRYDRHGRLTEKTDLIPEGVIRT------------DDERTHRYHYDSQ-HRLVHY 56 RYD++G L++ D T + Y+ ++L Sbjct: 1726 GRQTQMRYDQNGNLSQVVAPDGSVTGFIYCGCGSLLAQTGADGNTTNFEYEPNFNQLSVV 1785 Query: 57 TRTQYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQ 116 T + + +Y YD G + + +D + + Sbjct: 1786 TDAKDN----QLKYSYDDRGN--------------ATDIIYADGSRDRFKYDSEGNLILT 1827 Query: 117 NDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQM 176 +R Q Y LI + G+ + + ++ + +V+ Sbjct: 1828 TNRREGQVGYSYDDVDRLIHKQFGNGDSLNYEYDDRGNLIKVTDESGETVMVY------- 1880 Query: 177 LDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALV 236 D + +E + + + V Y D G L Sbjct: 1881 -DDADRLTKITYPTERWLEFTYENNRRSSMVDDSGGIVK--------YGYDGVGRLRKLT 1931 Query: 237 STEGATEWCAEYDEWGNLLNEENPHQLQQLIRL 269 E YD G L EEN + + Sbjct: 1932 DGENELIVQYSYDNIGRLAKEENGNGTATVYEY 1964 Score = 51.3 bits (121), Expect = 9e-05, Method: Composition-based stats. Identities = 58/466 (12%), Positives = 118/466 (25%), Gaps = 53/466 (11%) Query: 22 RLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYLYDPLGR-RVA 80 RL + + Y+SQ R++ T + + Y YD G ++ Sbjct: 1582 RLQTTYTNGHLTSWENSNGEKTDFVYNSQGRIIRTTDSSG----WVTNYGYDGTGEKLLS 1637 Query: 81 KRVWRRERDLTGWMSLSRKPQV------TWYGWDGDRLTTIQ---NDRTRIQTIYQPGSF 131 T S + + + +DG + + +++ Y+ Sbjct: 1638 VTTPDGTVSYTYNDSFAITSVTDIDGTKSLFKYDGQGRLIEESWGDGSEKVEYTYRDDGS 1697 Query: 132 TPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQML--DRLESEILADRV 189 + AT + R + G + L Q++ D + + Sbjct: 1698 VQVRDANGATTNMLLNDRGQVGQMTDALGRQTQMRYDQNGNLSQVVAPDGSVTGFIYCGC 1757 Query: 190 SEESRRWLASCGLT----VEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWC 245 + A T ++ + D RG ++ +G+ Sbjct: 1758 GSLLAQTGADGNTTNFEYEPNFNQLSVVTDAKDNQLKYSYDD-RGNATDIIYADGS-RDR 1815 Query: 246 AEYDEWGNLLNEENPHQLQQLIRLPGQQYDEESGLYYNRHRYYDPLQGRYITQDPIGLKG 305 +YD GNL+ N + Q G YD+ L + + G Sbjct: 1816 FKYDSEGNLILTTNRREGQ-----VGYSYDDVDRLIHKQF----------------GNGD 1854 Query: 306 GWNFYQYP--LNPVQYIDSMGLASKYGHLNNGGYGARPNKPPTPDPSKLPDIAKQLRLPY 363 N Y+Y N ++ D G + + + + + Sbjct: 1855 SLN-YEYDDRGNLIKVTDESGETVMVYDDADRLTKITYPTERWLEFTYENNRRSSMVDDS 1913 Query: 364 PIDQASSAPNVFKTFFRALSPYDYTLYCRKWVKPNLTCTPQDDSQYPGMDTKTASDYLPQ 423 V + + + L + + + Sbjct: 1914 GGIVKYGYDGVGRLRKLTDGENELIVQYSYDNIGRLAKEENGNGTATVYEYDDVGQLVKL 1973 Query: 424 TNWPTT-----QLPPGYTCAEPYLFPDINKPDGPATAGIDDLGEIL 464 TN+ Q Y DG G D +G+++ Sbjct: 1974 TNFDADNQVNSQFEYSYDDLGRR--STAKTLDGDWEYGYDAVGQLI 2017 Score = 47.1 bits (110), Expect = 0.001, Method: Composition-based stats. Identities = 32/200 (16%), Positives = 52/200 (26%), Gaps = 17/200 (8%) Query: 73 DPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQPGSFT 132 D L R+ + + + T + ++ D + T Y Sbjct: 1573 DYLENTNGDRLQTTYTNGHLTSWENSNGEKTDFVYNSQGRIIRTTDSSGWVTNYGYDGTG 1632 Query: 133 -PLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSE 191 L+ V T G ++ T S + DG +F RL E D + Sbjct: 1633 EKLLSVTTPDGTVSYTYNDSF--AITSVTDIDGTKSLFKYDGQ---GRLIEESWGDGSEK 1687 Query: 192 ESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEW 251 + + V ++ D RG + G YD+ Sbjct: 1688 VEYTYRDDGSVQVR---------DANGATTNMLLND-RGQVGQMTDALGRQT-QMRYDQN 1736 Query: 252 GNLLNEENPHQLQQLIRLPG 271 GNL P G Sbjct: 1737 GNLSQVVAPDGSVTGFIYCG 1756 Score = 45.2 bits (105), Expect = 0.005, Method: Composition-based stats. Identities = 32/234 (13%), Positives = 61/234 (26%), Gaps = 36/234 (15%) Query: 36 RTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMS 95 D Y L + + ++ ++Y+ GR + + Sbjct: 1578 TNGDRLQTTYT---NGHLTSWENSNG----EKTDFVYNSQGRIIR--------------T 1616 Query: 96 LSRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADT 155 VT YG+DG + Y + V G + + Sbjct: 1617 TDSSGWVTNYGYDGTGEKLLSVTTPDGTVSYTYNDSFAITSVTDIDGTKSLFKYDGQGRL 1676 Query: 156 LQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVY 215 +++S G+ V + S + D + L G QM Sbjct: 1677 IEESWGDGSEKVEYTYR------DDGSVQVRDANGATTNMLLNDRGQV-----GQMTDAL 1725 Query: 216 TPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRL 269 ++ D G +V+ +G+ Y G+LL + Sbjct: 1726 GRQTQMRY---DQNGNLSQVVAPDGSVTGFI-YCGCGSLLAQTGADGNTTNFEY 1775 >UniRef50_B9A933 SpvB-motif protein n=1 Tax=Wolbachia endosymbiont of Cadra cautella RepID=B9A933_9RICK Length = 2423 Score = 192 bits (487), Expect = 2e-47, Method: Composition-based stats. Identities = 62/462 (13%), Positives = 124/462 (26%), Gaps = 62/462 (13%) Query: 8 ARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTH--RYHYDSQHRLVHYTRTQYAE-- 63 + Y YD G +T D + + + YHYDS +RL T ++ Sbjct: 1762 KKLQSINYTYDPVGNITTMNDESYKTIFPNNKNIDTKSDYHYDSLYRLTEATGKEHPALS 1821 Query: 64 ------------------PLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVT-- 103 Y +D R + ++ + Sbjct: 1822 GKEEIIAPIPHLNNQNAISNYTEYYDFDYGSNITKIRHNGGNNSTKEFYISNKSNRSLPI 1881 Query: 104 -------------WYGWDGDRLTTIQNDRTRIQTIYQPG-SFTPLIRVETATGELAKTQR 149 + G+ L + + Y+ ++ +I + + Sbjct: 1882 IDRRSVNESNIDESHDERGNLLKL--HGSQNLHWNYRDNIAYVDIITRPSGKNDSEYYVY 1939 Query: 150 RSLADTLQQ------SGGEDGGSVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLT 203 S +++ + V + R E + + Sbjct: 1940 DSGGQRVRKVTETYQNNETSSTRVEKIYFGDIEVTRTYQESGLSKEKYTVHVMDDKSRVA 1999 Query: 204 VEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLL---NEENP 260 + + T + +H ++ EY +G + Sbjct: 2000 LHHYWTKGTSDETRESQSRYQLSNHLDSVALELNDNAEIMTYEEYLPFGGTALIAGKTVR 2059 Query: 261 HQLQQLIRLPGQQYDEESGLYYNRHRYYDPLQGRYITQDPIGLKGGWNFYQYP-LNPVQY 319 ++ R G++ DE +GLYY RYY P R+I DP G G N YQ+ NP+ Y Sbjct: 2060 EVTEKEYRYSGKERDESTGLYYYGARYYAPWLARWINPDPAGTVDGLNLYQFVGNNPINY 2119 Query: 320 IDSMGLASKYGHLN---------NGGYGARPNKPPTPDPSKLPDIAKQLRLPYPIDQASS 370 +DS+G K N + R ++ + + + + Sbjct: 2120 VDSIGETKKRDRYNVKFNQQSKTSIAVSRRKVGANFSLFEEVHESGGKGEKKLHAETSYI 2179 Query: 371 APNVFKTFF-RALSPYDYTL--YCRKWVKPNLTCTPQDDSQY 409 + + + L + + +D + Sbjct: 2180 TGQRSEGDLKDNIDKEIWKLDRSPCQNCTREIIEYVKDRLEA 2221 >UniRef50_C6CI62 YD repeat protein n=7 Tax=Enterobacteriaceae RepID=C6CI62_DICZE Length = 1475 Score = 192 bits (487), Expect = 3e-47, Method: Composition-based stats. Identities = 91/387 (23%), Positives = 127/387 (32%), Gaps = 63/387 (16%) Query: 4 DNRIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDD----------------ERTHRYHY 47 D + YRYD G LT R D + T R+HY Sbjct: 1013 DGHLLAAQTREYRYDGAGNLTGVRHNRDAEGYRLDATGRVQAVLSGGAGKPVDTTARFHY 1072 Query: 48 ------DSQHRLVHYTRTQYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQ 101 RL + + + ++ Y YD GR + K+V + +PQ Sbjct: 1073 TRTGLPQEAGRLTEWQAGRLVQHD-DTHYQYDRAGRLIRKQVVQ----------PGYRPQ 1121 Query: 102 VTWYGWDGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGG 161 V Y WD S L V+T TGE + + + Sbjct: 1122 VWQYRWD---------------------SRNQLRVVDTPTGERWLYRYDPFGRRVGKRCD 1160 Query: 162 EDGGSVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKI 221 + + Q+ E R W+ + V Q + + Sbjct: 1161 QKAEETRYQWDGDQI---AEIRHYRHGQLVARRHWVYNGWELVVQQRQHTGGDWETD--- 1214 Query: 222 HLYHCDHRGLPLALVSTEGATEWCA-EYDEWGNLLNEENPHQLQQLIRLPGQQYDEESGL 280 G P AL + +G W A WG E++ + GQ D ESGL Sbjct: 1215 -FVTSSQNGTPQALFTPDGTLRWQAPTATLWGQRQAEKSESPDPG-LAFAGQLRDSESGL 1272 Query: 281 YYNRHRYYDPLQGRYITQDPIGLKGGWNFYQYPLNPVQYIDSMGLASKYGHLNNGGYGAR 340 YNR RYYDP G Y++ DPIG+ GG N Y Y NP+ ++D GLA +LN G Sbjct: 1273 CYNRFRYYDPAGGCYVSPDPIGIAGGENNYGYVQNPMCWVDPFGLAGCSSYLNAWGGRNA 1332 Query: 341 PNKPPTPDPSKLPDIAKQLRLPYPIDQ 367 + S D K P Sbjct: 1333 KAFKNFWNNSSHADFMKAWNNPAFKKN 1359 Score = 76.4 bits (186), Expect = 2e-12, Method: Composition-based stats. Identities = 46/273 (16%), Positives = 77/273 (28%), Gaps = 35/273 (12%) Query: 6 RIARDAHY---LYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYA 62 RI YR D GRL E + Y YD+ HRL + + Sbjct: 466 RIDGGQKTLLAEYRQDEQGRLVEANATHAYHLY---------YEYDAAHRLTRW----HD 512 Query: 63 EPLVESRYLYDPLGRRVAKR------VWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQ 116 +RY YD GR V R + + Q + +G++ L + + Sbjct: 513 NDQTWARYEYDTQGRCVYTTCADGFLTARFDYLPDRVVMTDGLGQRSEFGFNDLHLMSWE 572 Query: 117 NDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQM 176 T Y+ L+R + G + + + G + Sbjct: 573 QSPLGHVTRYEYDEVGNLLREISPAGRVVEFGYLDDTGRVSTFTDASGHQWRYDYDDALR 632 Query: 177 LDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALV 236 L + RW+ E++ A + GL + Sbjct: 633 LCGVT------DPLGREWRWVYDAEGNPERLTGPEASEVRFAWNRY-------GLLTQVS 679 Query: 237 STEGATEWCAEYDEWGNLLNEENPHQLQQLIRL 269 G + +YD LL+ + Q +R Sbjct: 680 DAAGEVQARLQYDHRQRLLSATDAESRTQQMRY 712 Score = 67.9 bits (164), Expect = 7e-10, Method: Composition-based stats. Identities = 41/275 (14%), Positives = 75/275 (27%), Gaps = 51/275 (18%) Query: 3 PDNRIARDAH-----YLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYT 57 D R+ R+ Y YD G R + T + YD++ L+ T Sbjct: 822 ADGRVVRERDMTGTETHYGYDEDGLCVSV---------RNGEGDTRHFLYDARGLLLRET 872 Query: 58 RTQYAEPLVESRYLYDPLGRRVA------------------KRVWRRERDLTGWMSLSRK 99 Y YD +GR R W LT + + + Sbjct: 873 APDD-----TLHYRYDAVGRLTEVSSATAHVQLDYDLRDRVVREWHNGTLLTRQVDDNAR 927 Query: 100 PQVTWYGWDGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQS 159 WDGD + +++ L +V+ G + + Sbjct: 928 TVTRTLTWDGDA-GDTTGTLAPLTSLFHYTRTGELRQVQLPDGADLTLTYDAAGRESHRR 986 Query: 160 GGEDGGSVVFPPVLVQMLDRLES-EILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPA 218 GG V+ + + + ++ ++R + + +++ D Sbjct: 987 GGSGFVQQREYDVMGWLTREMSGAQHDGHLLAAQTREYRYDGAGNLTGVRHNRDAEG--- 1043 Query: 219 RKIHLYHCDHRGLPLALVSTEG----ATEWCAEYD 249 Y D G A++S T Y Sbjct: 1044 -----YRLDATGRVQAVLSGGAGKPVDTTARFHYT 1073 Score = 61.7 bits (148), Expect = 6e-08, Method: Composition-based stats. Identities = 44/322 (13%), Positives = 72/322 (22%), Gaps = 71/322 (22%) Query: 13 YLYRYDRHGRLTE-------------KTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRT 59 Y YD G L D RY YD RL T Sbjct: 580 TRYEYDEVGNLLREISPAGRVVEFGYLDDTGRVSTFTDASGHQWRYDYDDALRLCGVTDP 639 Query: 60 QY-----------------AEPLVESRYLY----------DPLGRRVAKRVWRRERDLTG 92 E R+ + D G A+ + + L Sbjct: 640 LGREWRWVYDAEGNPERLTGPEASEVRFAWNRYGLLTQVSDAAGEVQARLQYDHRQRLLS 699 Query: 93 WMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSL 152 + Q Y + + D R + Y+ S+ ++ + + Q Sbjct: 700 ATDAESRTQQMRYDMQDRVVQWQRADGARFRLGYRRASWALPEQLIRPDDKEEQRQYDRH 759 Query: 153 ADTLQQSGGED-------------GGSVVFPPVLVQMLDRLESEILADRVSEESRRWLAS 199 + L G + ES+ L ++ + RW Sbjct: 760 NNLLSYVDGNGALWRQSFGPFDLLTARTDAEGHTWRYAYDKESQQLTTVIAPDGSRWQWW 819 Query: 200 CGLTVEQMQNQM----------------DPVYTPARKIHLYHCDHRGLPLALVSTEGATE 243 ++ + V + D RGL L + + Sbjct: 820 LDADGRVVRERDMTGTETHYGYDEDGLCVSVRNGEGDTRHFLYDARGLLLRETAPDDTL- 878 Query: 244 WCAEYDEWGNLLNEENPHQLQQ 265 YD G L + Q Sbjct: 879 -HYRYDAVGRLTEVSSATAHVQ 899 Score = 51.0 bits (120), Expect = 1e-04, Method: Composition-based stats. Identities = 42/276 (15%), Positives = 73/276 (26%), Gaps = 34/276 (12%) Query: 16 RYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYLYDPL 75 +YDRH L D + R + L T + RY YD Sbjct: 755 QYDRHNNLLSYVD---------GNGALWRQSFGPFDLLTARTDAEGH----TWRYAYDK- 800 Query: 76 GRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQPGSFTPLI 135 + LT ++ W DG + D T +T Y + Sbjct: 801 ----------ESQQLTTVIAPDGSRWQWWLDADGR--VVRERDMTGTETHYGYDEDGLCV 848 Query: 136 RVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSEESRR 195 V G+ + L+++ +D + V ++ + + + R Sbjct: 849 SVRNGEGDTRHFLYDARGLLLRETAPDDTLHYRYDAVG-RLTEVSSATAHVQLDYDLRDR 907 Query: 196 WLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLL 255 + + D T R + G T Y G L Sbjct: 908 VVREWHNGTLLTRQVDDNARTVTRTLTW-----DGDAGDTTGTLAPLTSLFHYTRTGELR 962 Query: 256 NEENPHQLQQLIRL--PGQQYDEESGLYYNRHRYYD 289 + P + G++ G + + R YD Sbjct: 963 QVQLPDGADLTLTYDAAGRESHRRGGSGFVQQREYD 998 Score = 49.0 bits (115), Expect = 4e-04, Method: Composition-based stats. Identities = 40/275 (14%), Positives = 64/275 (23%), Gaps = 32/275 (11%) Query: 17 YDRHGRLTE--KTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYLYDP 74 +D H E + +R D T + ++ L R + + + Y D Sbjct: 424 HDSHDNRIELVRDPKGYLRQVRHSDGVTLLLVWRGEY-LHQIQRIDGGQKTLLAEYRQDE 482 Query: 75 LGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQPGSFTPL 134 GR V Y +D T +D + Y+ + Sbjct: 483 QGRLVEANATHAYHLY--------------YEYDAAHRLTRWHDNDQTWARYEYDTQGRC 528 Query: 135 IRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPP----VLVQMLDRLESEILADRVS 190 + A G L + G F Q + D V Sbjct: 529 VYTTCADGFLTARFDYLPDRVVMTDGLGQRSEFGFNDLHLMSWEQSPLGHVTRYEYDEVG 588 Query: 191 EESRRWLASCGLTVEQMQNQMDPVYT----PARKIHLYHCDHRGLPLALVSTEGATEWCA 246 R + + + V T + + D + G W Sbjct: 589 NLLREISPAGRVVEFGYLDDTGRVSTFTDASGHQWRYDYDDAL-RLCGVTDPLGRE-WRW 646 Query: 247 EYDEWGNLLNEENPHQLQ-----QLIRLPGQQYDE 276 YD GN P + L Q D Sbjct: 647 VYDAEGNPERLTGPEASEVRFAWNRYGLLTQVSDA 681 >UniRef50_A6FF65 TccC3 n=1 Tax=Moritella sp. PE36 RepID=A6FF65_9GAMM Length = 967 Score = 192 bits (487), Expect = 3e-47, Method: Composition-based stats. Identities = 60/375 (16%), Positives = 108/375 (28%), Gaps = 50/375 (13%) Query: 4 DNRIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERT--HRYHYDSQHRLVHYTRTQY 61 + R + Y YD G + D + T Y YD+ ++L+ T + Sbjct: 307 NRRNTLLQNLNYTYDPVGNIVSVNDSAQATRFYKNQRVTSKQAYTYDAIYQLITATGREN 366 Query: 62 AEPL--------------------VESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQ 101 + L Y YD G + + + Sbjct: 367 STHLSQNGSLPSALPIGDKSQYTRYTRSYSYDRGGNLYTVTHNGTNTYTLDMVVSDKSNR 426 Query: 102 V---------------TWYGWDGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAK 146 +++ G+ + Q+ G L V + Sbjct: 427 AVQQRSVNPIAEDKVDSYFDAHGNLMKLEQSKNLVW------GRHDQLKLVAVTGNQNEV 480 Query: 147 TQRRSLADTLQQ--SGGEDGGSVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTV 204 Q +++ S + V++ P L + R ++ + + + Sbjct: 481 YQYSGQGSRIRKYLSDNINESEVIYLPGLELRMKRNNGKLTEELHLVTLMNTGRNKVREL 540 Query: 205 EQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQ 264 + + P ++ +H G + EY +G + + Sbjct: 541 YWPEGKNKPENMKDHQLRYSLDNHLGSSNLELDENADILTLEEYYPFGGTALWSAKNDTE 600 Query: 265 QLI---RLPGQQYDEESGLYYNRHRYYDPLQGRYITQDPIGLKGGWNFYQYP-LNPVQYI 320 R G++ D +GLYY HRYY P GR++ DP G N Y NP+ Sbjct: 601 AKYKYVRYSGKERDM-TGLYYYGHRYYMPWMGRWLNPDPGWTVDGPNLYCMVRNNPITMY 659 Query: 321 DSMGLASKYGHLNNG 335 D GLA+ N Sbjct: 660 DPSGLATTPTAFGNM 674 Score = 56.0 bits (133), Expect = 3e-06, Method: Composition-based stats. Identities = 44/256 (17%), Positives = 71/256 (27%), Gaps = 27/256 (10%) Query: 7 IARDAHYLYRYDRHGRLTEK-------TDLIPEGVIRTDDERTHRYHYDSQH-RLVHYTR 58 +A Y Y GR T+ T + Y YD Q RL+ Sbjct: 243 VAGLLTATY-YQASGRATQHVLSAIHYTANGQVMSETAGNGVVTTYEYDKQDWRLMQVLT 301 Query: 59 TQYAEPLVES-----RYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLT 113 T+ + + Y YDP+G V+ T + R Y +D Sbjct: 302 TRPEKNRRNTLLQNLNYTYDPVGNIVS---VNDSAQATRFYKNQRVTSKQAYTYDAIYQL 358 Query: 114 TIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVL 173 R + Q GS P + + R D G + +V Sbjct: 359 ITATGRENSTHLSQNGSL-PSALPIGDKSQYTRYTRSYSYDR-----GGNLYTVTHNGTN 412 Query: 174 VQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPL 233 LD + S+ V + S +A + + ++ + D Sbjct: 413 TYTLDMVVSDKSNRAVQQRSVNPIAEDKVDSYFDAHGNLMKLEQSKNLVWGRHDQL---- 468 Query: 234 ALVSTEGATEWCAEYD 249 LV+ G +Y Sbjct: 469 KLVAVTGNQNEVYQYS 484 Score = 45.2 bits (105), Expect = 0.006, Method: Composition-based stats. Identities = 29/257 (11%), Positives = 59/257 (22%), Gaps = 36/257 (14%) Query: 16 RYDRHGRLTEKTDLIPEGVIRTDDERTHRYHY---DSQHRLVHYTRTQYAEPLVESRYLY 72 YD+ G LTE T + G Y D Q + ++Y Sbjct: 162 HYDQGG-LTEVTSISLTGQPLNQQRNLLNDKYIDSDWQGNDAEAWSELLDNNTYSTAWIY 220 Query: 73 DPLGRRVAKRVWRRERDLTGWMSLSRKPQVT---------------WYGWDGDRLTTIQN 117 D LG ++++ + + Y +G ++ Sbjct: 221 DALGTALSQKDANDNVQYSQYDVAGLLTATYYQASGRATQHVLSAIHYTANGQVMSETAG 280 Query: 118 DRTRIQTIYQPGSFTPLIRVETATG--------ELAKTQRRSLADTLQQSGGEDGGSVVF 169 + Y + + + T + + + + + Sbjct: 281 NGVVTTYEYDKQDWRLMQVLTTRPEKNRRNTLLQNLNYTYDPVGNIVSVNDSAQATRFYK 340 Query: 170 PPVLV--QMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCD 227 + Q L E+ L+ G + YT + + Y Sbjct: 341 NQRVTSKQAYTYDAIYQLITATGRENSTHLSQNGSLPSALPIGDKSQYTRYTRSYSYDRG 400 Query: 228 -------HRGLPLALVS 237 H G + Sbjct: 401 GNLYTVTHNGTNTYTLD 417 >UniRef50_Q3JM67 Insecticidal toxin complex protein TcdB2 n=11 Tax=Proteobacteria RepID=Q3JM67_BURP1 Length = 2458 Score = 191 bits (486), Expect = 3e-47, Method: Composition-based stats. Identities = 60/357 (16%), Positives = 94/357 (26%), Gaps = 38/357 (10%) Query: 8 ARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDER--THRYHYDSQHRLVHYTRTQYAEPL 65 Y YDR G +T+ D + Y YD ++LV T + A Sbjct: 1814 TVLQDLRYTYDRVGNVTQLADQATRVRYFRNQRVAAVRTYQYDWLYQLVRATGREQANAG 1873 Query: 66 V-----------------ESRYLYDPLGRRV------------AKRVWRRERDLTGWMSL 96 + YD G A V R + Sbjct: 1874 QEGVALPPVGNPDALVNYTRTFAYDAAGNLTRTVHRGATRYVLALAVSRSSNRAVAGRRV 1933 Query: 97 SRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTL 156 + G+ N + L R A + Sbjct: 1934 GADDVEAQFDAQGNPHRLGSNQPLTWSADNRLSRAVQLPRTGGEDDSEA-YGYGGDGQRV 1992 Query: 157 QQSGGEDGGSVVFPPVLVQM-LDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVY 215 ++ + G+V + + + V E +A P Sbjct: 1993 RKWSSQQAGAVTHRREVRYLPGLERRTNTATGEVLEVVSSAVAGRTAMRCLHWRASRPGG 2052 Query: 216 TPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRL---PGQ 272 DH G + G EY +G Q++ + G+ Sbjct: 2053 LDNDMRRYSVNDHLGSSGLELDQSGQRLSAEEYYPYGGTAVWLPKSQVEGNYKFVRHAGK 2112 Query: 273 QYDEESGLYYNRHRYYDPLQGRYITQDPIGLKGGWNFYQYP-LNPVQYIDSMGLASK 328 + D SGLY +R+Y P R++ DP G G N Y+ NPV D+ G + Sbjct: 2113 ERDV-SGLYDYGYRHYAPWLARWLNPDPAGTVDGLNLYRMVRNNPVTLCDTDGRRPE 2168 Score = 46.7 bits (109), Expect = 0.002, Method: Composition-based stats. Identities = 54/336 (16%), Positives = 84/336 (25%), Gaps = 57/336 (16%) Query: 12 HYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYH----------YDSQHRLVHYTRTQY 61 LY YD GRL + T +D + L T + Sbjct: 1467 DTLY-YDAPGRLAQLTKADGNRRTSQYRPWYRIETDEMGAPVATVHDGRG-LAVRTVQRP 1524 Query: 62 AEPLVE------SRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTI 115 +R+ YD GR V+ R + + YG G +T Sbjct: 1525 PPGAATADKVRITRHAYDAAGRLVSSSDPRFFDRQQAGETTLAGNERYRYGLSGSAVTRE 1584 Query: 116 QNDRT-------------------RIQTIYQPGSFTPLIRVETATG--------ELAKTQ 148 D Q + + L V A+G E + Sbjct: 1585 SRDAGWQVDLLDAGGALWRSYTARDHQWRREYDALRRLSAVWLASGMSRTERCTERLRYG 1644 Query: 149 RRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQ 208 + D + G +V + + S L + EE RR+L + + Sbjct: 1645 DDAGIDAVTARRANLRGRLVSHYDPAGLR-EITSYSLGGMIREEQRRFLQQRDWSSDWPA 1703 Query: 209 NQMDPVYTPARKI---HLYHCDHRGLPLALVSTEGAT---EWCAEYDEWGNLLNEENPH- 261 +I G L L+ G W G+ L Sbjct: 1704 TPGAAAAHLEEQIETSRWQCT-ALGDELMLLDAAGHRHRCAWHVSGRPSGSWLQLSGGAE 1762 Query: 262 -QLQQLIRLPG--QQYDEESGLYYNRHRYYDPLQGR 294 + + Q E++G YDP R Sbjct: 1763 QAVVSELSYTADHQLLHEQAGNGVTSDFEYDPQTRR 1798 >UniRef50_Q07833 Wall-associated protein n=18 Tax=Bacillaceae RepID=WAPA_BACSU Length = 2334 Score = 191 bits (486), Expect = 4e-47, Method: Composition-based stats. Identities = 80/394 (20%), Positives = 121/394 (30%), Gaps = 51/394 (12%) Query: 8 ARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVE 67 Y YD +G T V +Y Y ++LV T Sbjct: 1889 GDILTESYEYDANGNRTTINSSASGKV---------QYEYGKLNQLVKETHEDG----TV 1935 Query: 68 SRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVT-------WYGWDGDRLTTIQNDRT 120 Y YD G R + T S + Q+T Y +G+R + Sbjct: 1936 IEYTYDGFGNRKTVTTIKDGSSKTVNASFNIMNQLTKVNDESISYDKNGNR-------TS 1988 Query: 121 RIQTIYQPGSFTPLIRVETATGEL--AKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLD 178 + Y + L V + A + + +Q++ + + D Sbjct: 1989 DGKFTYTWDAEDNLTAVTKKGEDKPFATYKYDEKGNRIQKTVNGKVTNYFY------DGD 2042 Query: 179 RLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVST 238 L D + ++ + + YT K + YH + G +A+ + Sbjct: 2043 SLNVLYETDADNNVTKSYTYGDSGQL--------LSYTENGKKYFYHYNAHGDIIAISDS 2094 Query: 239 EGATEWCAEYDEWGNLLNEENPHQL-QQLIRLPGQQYDEESGLYYNRHRYYDPLQGRYIT 297 G T +YD WGN E ++ R G QYDEE+GLYY RYY+P G +++ Sbjct: 2095 TGKTVAKYQYDAWGNPTKTEASDEVKDNRYRYAGYQYDEETGLYYLMARYYEPRNGVFLS 2154 Query: 298 QDPIGLKGG----WNFYQYP-LNPVQYIDSMGLASKYGHLNNGG--YGARPNKPPTPDPS 350 DP G N Y Y NPV +D G G + K Sbjct: 2155 LDPDPGSDGDSLDQNGYAYGNNNPVMNVDPDGHWVWLVVNAGFAAYDGYKAYKSGKGWKG 2214 Query: 351 KLPDIAKQLRLPYPIDQASSAPNVFKTFFRALSP 384 A AS A K + Sbjct: 2215 AAWAAASNFGPGKIFKGASRAYKFTKKAVKITGH 2248 Score = 76.8 bits (187), Expect = 1e-12, Method: Composition-based stats. Identities = 32/249 (12%), Positives = 75/249 (30%), Gaps = 35/249 (14%) Query: 5 NRIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEP 64 N++ + YD++G T + Y +D++ L T+ +P Sbjct: 1968 NQLTKVNDESISYDKNGNRTS--------------DGKFTYTWDAEDNLTAVTKKGEDKP 2013 Query: 65 LVESRYLYDPLGRRVAKRVWRRERDLTG--------WMSLSRKPQVTWYGW-DGDRLTTI 115 Y YD G R+ K V + + + + + Y + D +L + Sbjct: 2014 FAT--YKYDEKGNRIQKTVNGKVTNYFYDGDSLNVLYETDADNNVTKSYTYGDSGQLLSY 2071 Query: 116 QNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQ 175 + + Y + +I + +TG+ + ++ D Sbjct: 2072 TENGKK--YFYHYNAHGDIIAISDSTGKTVAKYQYDAWGNPTKTEASDEVK-----DNRY 2124 Query: 176 MLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLAL 235 + + +R + G+ + + + + + Y + P+ Sbjct: 2125 RYAGYQYDEETGLYYLMARYYEPRNGVFLSLDPDPGSDGDSLDQNGYAYGNN---NPVMN 2181 Query: 236 VSTEGATEW 244 V +G W Sbjct: 2182 VDPDGHWVW 2190 Score = 71.4 bits (173), Expect = 7e-11, Method: Composition-based stats. Identities = 43/270 (15%), Positives = 78/270 (28%), Gaps = 36/270 (13%) Query: 10 DAHYLYRYDRHGRLTEKTDLIPEGVIR-----------TDDERTHRYHYDSQHRLVHYTR 58 + YD +G +T T + V D Y YDS+ RLV Sbjct: 1046 GRKLTFTYDENGHVTSITGPKNKKVTYSYENDLLKKVTDTDGTVTSYDYDSEGRLVKQYS 1105 Query: 59 TQYAEPLVE-SRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQN 117 E + Y Y G R+ K + ++ V Y D L Q Sbjct: 1106 ANSTEAKPVFTEYQY--SGHRLEKAINAKKETY-----------VYSYDADKKTLLMTQP 1152 Query: 118 DRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQML 177 + ++Q Y + P+ ++ A G T + + + + + Q Sbjct: 1153 NGRKVQYGYN-EAGNPIQVIDDAEGLKITTNTKYEGNNVVEDVDPNDVGTGKATESYQYD 1211 Query: 178 DRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVS 237 + D E+ + + +T + + D ++ Sbjct: 1212 KDGNVTSVKDAYGTETYEYNKNNDVT---------KMKDTEGNVTDIAYDGL-DAVSETD 1261 Query: 238 TEGATEWCAEYDEWGNLLNEENPHQLQQLI 267 G + A YD++GN + I Sbjct: 1262 QSGKSSSAAVYDKYGNQIQSSKDLSASTNI 1291 Score = 59.8 bits (143), Expect = 2e-07, Method: Composition-based stats. Identities = 38/286 (13%), Positives = 65/286 (22%), Gaps = 38/286 (13%) Query: 8 ARDAHYLYRYDRHGRLTEKTDLIPEG--------------VIRTDDERTHRYHYDSQHRL 53 A+ Y YD+ +LT T IR ++T+++ YD +L Sbjct: 1648 AKGEKTTYTYDQADQLTNMTLSNGTSILHSYDKEGNEVSKTIRAGADQTYKFEYDVMGKL 1707 Query: 54 VHYTRTQYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSR-------KPQVTWYG 106 V T E YD + R + + Sbjct: 1708 VKTTDPLGNVLASE----YDANSNLTKTISPNGNEVSLSYDGTDRVKSKSYNGTEKYIFT 1763 Query: 107 WDGDRL-TTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGG 165 +D + T++ N + L + G T S Sbjct: 1764 YDKNGNETSVVNKEQNTTKKRTFDNKNRLTELTDRGGSQTWTYPSDSDKLKTFSWIHGDQ 1823 Query: 166 SVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYH 225 ++L+ I + G + + +L Sbjct: 1824 K----GTNQFTYNKLDQMIEMKDSTSSYSFDYDENGNVQTFITGNGGGTSFSYDERNLVS 1879 Query: 226 CDHRGLPLALVSTEGA--TEWCAEYDEWGNLLNEENPHQLQQLIRL 269 H G G EYD GN + + Sbjct: 1880 SLHIG------DKNGGDILTESYEYDANGNRTTINSSASGKVQYEY 1919 Score = 57.1 bits (136), Expect = 1e-06, Method: Composition-based stats. Identities = 29/238 (12%), Positives = 74/238 (31%), Gaps = 37/238 (15%) Query: 35 IRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWM 94 + Y Y+ +++L T + + YD G + Sbjct: 1020 VVDGHNNATVYTYNDKNQLTAIT----DASGRKLTFTYDENGHVTSIT------------ 1063 Query: 95 SLSRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAK---TQRRS 151 K + Y ++ D L + + + Y S L++ +A AK T+ + Sbjct: 1064 --GPKNKKVTYSYENDLLKKVTDTDGTVT-SYDYDSEGRLVKQYSANSTEAKPVFTEYQY 1120 Query: 152 LADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQM 211 L+++ + V+ D + +L + + ++ + Q+ + Sbjct: 1121 SGHRLEKAINAKKETYVYSY------DADKKTLLMTQPNGRKVQYGYNEAGNPIQVIDDA 1174 Query: 212 DPVYTPARKIHLYHCDHRGLPLALVSTE----GATEWCAEYDEWGNLLNEENPHQLQQ 265 + + + + V G +YD+ GN+ + ++ + + Sbjct: 1175 EGLKITTNTKY-----EGNNVVEDVDPNDVGTGKATESYQYDKDGNVTSVKDAYGTET 1227 Score = 56.4 bits (134), Expect = 2e-06, Method: Composition-based stats. Identities = 24/231 (10%), Positives = 62/231 (26%), Gaps = 37/231 (16%) Query: 16 RYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYLYDPL 75 YD +G K + TD YD ++ ++ Y YD Sbjct: 1613 TYDSNGNYVTKEEDELGYATSTD--------YDE----TGKKTSETDAKGEKTTYTYDQA 1660 Query: 76 GRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQPGSFTPLI 135 + + L Y +G+ ++ ++ L+ Sbjct: 1661 DQLTNMTLSNGTSILH------------SYDKEGNEVSKTIRAGADQTYKFEYDVMGKLV 1708 Query: 136 RVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSEESRR 195 + G + ++ + ++ L ++ +G V + + + + Sbjct: 1709 KTTDPLGNVLASEYDANSN-LTKTISPNGNEVSLSYDGTDRVKS--------KSYNGTEK 1759 Query: 196 WLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWCA 246 ++ + + T ++ D++ L G+ W Sbjct: 1760 YIFTYDKNGNETSVVNKEQNTTKKRTF----DNKNRLTELTDRGGSQTWTY 1806 Score = 46.7 bits (109), Expect = 0.002, Method: Composition-based stats. Identities = 17/160 (10%), Positives = 37/160 (23%), Gaps = 21/160 (13%) Query: 9 RDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVES 68 Y Y+ G + D I T+ + Y+ + + Sbjct: 1153 NGRKVQYGYNEAGNPIQVIDDAEGLKITTNTK------YEGNNVVEDVDPNDVGTGKATE 1206 Query: 69 RYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQP 128 Y YD G + + Y ++ + T D T Sbjct: 1207 SYQYDKDGNVTSVK---------------DAYGTETYEYNKNNDVTKMKDTEGNVTDIAY 1251 Query: 129 GSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVV 168 + + + + + +Q S + + Sbjct: 1252 DGLDAVSETDQSGKSSSAAVYDKYGNQIQSSKDLSASTNI 1291 Score = 42.9 bits (99), Expect = 0.026, Method: Composition-based stats. Identities = 24/199 (12%), Positives = 46/199 (23%), Gaps = 37/199 (18%) Query: 8 ARDAHYLYRYDRHGRLTEKTDLIPEGVIR----------------TDDERTHRYHYDSQH 51 Y YD GRL ++ + T+ Y YD+ Sbjct: 1085 TDGTVTSYDYDSEGRLVKQYSANSTEAKPVFTEYQYSGHRLEKAINAKKETYVYSYDAD- 1143 Query: 52 RLVHYTRTQYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSL--------------- 96 T + +Y Y+ G + +T Sbjct: 1144 ---KKTLLMTQPNGRKVQYGYNEAGNPIQVIDDAEGLKITTNTKYEGNNVVEDVDPNDVG 1200 Query: 97 -SRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADT 155 + + Y DG+ +T++++ Y + ++ Sbjct: 1201 TGKATESYQYDKDGN-VTSVKDAYGTETYEYNKNNDVTKMKDTEGNVTDIAYDGLDAVSE 1259 Query: 156 LQQSGGEDGGSVVFPPVLV 174 QSG +V Sbjct: 1260 TDQSGKSSSAAVYDKYGNQ 1278 >UniRef50_C7QG23 YD repeat protein n=2 Tax=Catenulispora acidiphila DSM 44928 RepID=C7QG23_CATAD Length = 1528 Score = 191 bits (485), Expect = 4e-47, Method: Composition-based stats. Identities = 77/353 (21%), Positives = 119/353 (33%), Gaps = 37/353 (10%) Query: 7 IARDAHYLYRYDRHGRLTEK-----TDLIPEGVIRTDDER----------THRYHYDSQH 51 I A ++D GRL + T L+ D +Y D++ Sbjct: 1013 IDGGARLTQQFDALGRLAGQRLAGDTTLLERSYSYRADGIPVAVSDSLRGARQYEVDAEG 1072 Query: 52 RLVHYTRTQYAEPLVESRYLYDPLGR-----RVAKRVWRRERDLTGWMSLSRKPQVTWYG 106 R++ ++ Y YD G R A R + + RK T Y Sbjct: 1073 RVLSVQAQTWS-----ESYSYDAFGNVAQDVRPAGRSDDSLDTPSFEGTRVRKTGRTHYD 1127 Query: 107 WDGD----RLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSG-G 161 +D R R + Y S L +V G + + + Sbjct: 1128 YDAQGRTIRAVRRTLSGQRREWNYSWDSNDQLTQVTLPDGAVWQYTYDPTGRRTGKIRLS 1187 Query: 162 EDGGSVVFPPVLVQMLDRLESEILADRVSEESRR-WLASCGLTVEQM------QNQMDPV 214 +DGG+ RL ++ + W + P Sbjct: 1188 DDGGTPAERVWFSWDGSRLVEQVTEGADGVRTALVWDYEANDGWRPVAQRRRSWAADAPQ 1247 Query: 215 YTPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQY 274 H D G P LV+ +G+ +W +G + + H +R PGQ Sbjct: 1248 EAIDEAFHTIVTDLVGTPTELVAPDGSIDWYTTTSLYGTTIATSSDHGADCPLRFPGQFR 1307 Query: 275 DEESGLYYNRHRYYDPLQGRYITQDPIGLKGGWNFYQYPLNPVQYIDSMGLAS 327 D+E+GL+YN HRYYDP +G Y++ DP+GL N Y NP+ D +GL Sbjct: 1308 DDETGLHYNVHRYYDPERGSYLSPDPLGLAAAPNDQAYVANPMVSADPLGLIC 1360 Score = 73.3 bits (178), Expect = 2e-11, Method: Composition-based stats. Identities = 56/403 (13%), Positives = 101/403 (25%), Gaps = 61/403 (15%) Query: 10 DAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESR 69 +YRYD G + TD + ++ YD++ L+ T +R Sbjct: 600 GQPTVYRYDETGHVVAITDPLGGTLLSE---------YDARGHLLSGT----DAIGRTTR 646 Query: 70 YLYDPLGRRVAKRVWRRERDLTGWMSLSR-------KPQVTWYGWDGDRLTTIQNDRTRI 122 YD G V + ++ Y +D D Sbjct: 647 REYDADGNAVRVSRPDGTEITAAFAGPAQPLEVNLPDGTAWRYTYDDRGNLASVTDPAGA 706 Query: 123 QTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLES 182 + Y+ ++ A G + S L+ + +++ Sbjct: 707 VSTYRYDEHGAVVESTDALGMATRVANDSTGLALEIVDPVGEVTRAVRDAFGRIV----- 761 Query: 183 EILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLY-HCDHRGLPLALVSTEGA 241 E+ + + + + +T + H H D G Sbjct: 762 EVHGAVGEVVATEFTVEGLPLRQTTNEGLTTTWTYDAERHAIEHVDPLGTVT-------- 813 Query: 242 TEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEESGLYYNRHRYYDPLQGRYITQDPI 301 +EY +G L + ++ D E L R +P + Sbjct: 814 ---RSEYGPFGKLTARTDTTGVRHTFAY-----DTELNLV----RVTNPAGATW------ 855 Query: 302 GLKGGWNFYQY--PLNPVQYIDSMGLASKYGHLNNGGYGARPNKPPTPDPSKLPDIAKQL 359 Y + N V D G +Y H G AR N + + + + Sbjct: 856 -------DYTFDGAGNIVAETDFGGRVLRYTHDAVGQLTARANGAGQVVRMERNPMGQVV 908 Query: 360 RLPYPIDQASSAPNVFKTFFRALSPYDYTLYCRKWVKPNLTCT 402 R P + + P Y LT Sbjct: 909 RRLAPEGETFYEYDTAGRVLAVTGPGSALSYTYDEAGRPLTEA 951 Score = 68.7 bits (166), Expect = 5e-10, Method: Composition-based stats. Identities = 40/289 (13%), Positives = 82/289 (28%), Gaps = 54/289 (18%) Query: 6 RIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHR-LVHYTRTQYAEP 64 R+A + Y YD GR+ T Y YD R L + Sbjct: 910 RLAPEGETFYEYDTAGRVLAVT----------GPGSALSYTYDEAGRPLTEAVDGR---- 955 Query: 65 LVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVT------WYGWDGDRLTTIQND 118 + + YD GRRV + + +R+ +T + +D T++ Sbjct: 956 --VTEFAYDAAGRRVGRLTPSGAVSRWDYDPQARRATLTAGSRQVAFDFDIAGRETVRTI 1013 Query: 119 RTRIQTIYQPGSFTPLI-RVETATGELAKTQRRSLADTLQQSGGED-GGSVVFPPVLVQM 176 + Q + L + L + AD + + + G+ + Sbjct: 1014 DGGARLTQQFDALGRLAGQRLAGDTTLLERSYSYRADGIPVAVSDSLRGARQYEVDAEGR 1073 Query: 177 LDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIH-----LYHCDHRGL 231 + ++++ ++ S ++ +A + + +D ++ Y D +G Sbjct: 1074 VLSVQAQTWSESYSYDAFGNVAQDVRPAGRSDDSLDTPSFEGTRVRKTGRTHYDYDAQGR 1133 Query: 232 PLALV---------------STEGAT---------EWCAEYDEWGNLLN 256 + V + W YD G Sbjct: 1134 TIRAVRRTLSGQRREWNYSWDSNDQLTQVTLPDGAVWQYTYDPTGRRTG 1182 Score = 65.2 bits (157), Expect = 5e-09, Method: Composition-based stats. Identities = 42/273 (15%), Positives = 74/273 (27%), Gaps = 29/273 (10%) Query: 13 YLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYLY 72 ++YDR GRLT D E RY +D+ R+ + Y Y Sbjct: 518 RAFQYDRPGRLTGVVDSSGEPF---------RYEHDTADRITAWVDRLG----YRYVYEY 564 Query: 73 DPLGRRVAKRVWRR--------ERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQT 124 GR V + + L Q T Y +D D Sbjct: 565 GEDGRVVRGIGDGGFLSATFVYDDENEANTVLDSLGQPTVYRYDETGHVVAITDPLGGTL 624 Query: 125 IYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVV-----FPPVLVQMLDR 179 + + + L+ A G + + + + ++ S + P+ V + D Sbjct: 625 LSEYDARGHLLSGTDAIGRTTRREYDADGNAVRVSRPDGTEITAAFAGPAQPLEVNLPDG 684 Query: 180 LESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPA--RKIHLYHCDHRGLPLALVS 237 D + + ++ + V + D GL L +V Sbjct: 685 TAWRYTYDDRGNLASVTDPAGAVSTYRYDEHGAVVESTDALGMATRVANDSTGLALEIVD 744 Query: 238 TEGATEWCAEYDEWGNLLNEENPHQLQQLIRLP 270 G A D +G ++ Sbjct: 745 PVGEVT-RAVRDAFGRIVEVHGAVGEVVATEFT 776 Score = 62.5 bits (150), Expect = 3e-08, Method: Composition-based stats. Identities = 39/257 (15%), Positives = 66/257 (25%), Gaps = 31/257 (12%) Query: 18 DRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYLYDPLGR 77 D R+T L D + YD RL RY +D R Sbjct: 497 DGGLRVTGIRLLDGS----QDGVIVRAFQYDRPGRLTGV----VDSSGEPFRYEHDTADR 548 Query: 78 RVAKRVWRRERDLTGWMSLSRKPQ--------VTWYGWDGDRLTTIQNDRTRIQTIYQPG 129 A R + + R + + +D + D T+Y+ Sbjct: 549 ITAWVDRLGYRYVYEYGEDGRVVRGIGDGGFLSATFVYDDENEANTVLDSLGQPTVYRYD 608 Query: 130 SFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRV 189 ++ + G ++ + L + + E AD Sbjct: 609 ETGHVVAITDPLGGTLLSEYDARGHLLSGTDAIGRTTRR--------------EYDADGN 654 Query: 190 SEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWCAEYD 249 + R + Q V P Y D RG ++ GA YD Sbjct: 655 AVRVSRPDGTEITAAFAGPAQPLEVNLPDGTAWRYTYDDRGNLASVTDPAGA-VSTYRYD 713 Query: 250 EWGNLLNEENPHQLQQL 266 E G ++ + + Sbjct: 714 EHGAVVESTDALGMATR 730 Score = 56.0 bits (133), Expect = 3e-06, Method: Composition-based stats. Identities = 33/252 (13%), Positives = 70/252 (27%), Gaps = 41/252 (16%) Query: 18 DRHGRLTEKTDLIPEG------------VIRTDDERTHRYHYDSQHRLVHYTRTQYAEPL 65 D GR+ E + E T++ T + YD++ + Sbjct: 755 DAFGRIVEVHGAVGEVVATEFTVEGLPLRQTTNEGLTTTWTYDAERH--AIEHVDPLGTV 812 Query: 66 VESRYLYDPLGRRVAKRVWRRERDLTGWMS-------LSRKPQVTWYGWDGDRLTTIQND 118 S Y P G+ A+ R + + + Y +DG + D Sbjct: 813 TRSEYG--PFGKLTARTDTTGVRHTFAYDTELNLVRVTNPAGATWDYTFDGAGNIVAETD 870 Query: 119 RTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLD 178 Y + L G++ + +R + +++ E + + Sbjct: 871 FGGRVLRYTHDAVGQLTARANGAGQVVRMERNPMGQVVRRLAPEGETFYEYDTAGRVL-- 928 Query: 179 RLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVST 238 + S S + + E + ++ + D G + ++ Sbjct: 929 -----AVTGPGSALSYTYDEAGRPLTEAV----------DGRVTEFAYDAAGRRVGRLTP 973 Query: 239 EGATEWCAEYDE 250 GA +YD Sbjct: 974 SGA-VSRWDYDP 984 >UniRef50_B1KGR6 YD repeat protein n=1 Tax=Shewanella woodyi ATCC 51908 RepID=B1KGR6_SHEWM Length = 1699 Score = 191 bits (485), Expect = 5e-47, Method: Composition-based stats. Identities = 78/375 (20%), Positives = 129/375 (34%), Gaps = 56/375 (14%) Query: 5 NRIARDAHYL-----YRYDRHGRLTEKTDLIPEGVIRTDDE------------RTHRYHY 47 N+I++ + ++ G++T+ P T +T + Y Sbjct: 1207 NQISQIDDSHWGLSEFEHNSVGQITQHKQYAPGVENGTVKGAAKGTAQTGQAQQTQAFSY 1266 Query: 48 DSQHRLVHYTRTQYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGW 107 DS+ L ++ A+ + V KRV + + + Y Sbjct: 1267 DSEQNLTQSSQVLSADNGNVIDF--------VQKRVEKALKYQQAGRVETVGDHTYRYDA 1318 Query: 108 DGDRLT--TIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGG 165 +G + T + T YQ LI+V A G+ Q + + Sbjct: 1319 NGRAVEKCTRKAGFRPQTTFYQWDEEDQLIQVRLANGDCWHYQYDPFGRRIAKIKQSTKE 1378 Query: 166 SVVFPP----VLVQMLDRLESEI--LADRVSEESRRWLASCGLTVEQMQ-------NQMD 212 + + + L + AD + +W+ Q N + Sbjct: 1379 QELRNTPSQFRYLWDGNNLVEQQKCYADGTLAHTTQWVYEPNSFRPLAQLTQNHGQNSQE 1438 Query: 213 PVYTPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNL----------------LN 256 A ++H D G P L + G EW E WG L Sbjct: 1439 TADNLASELHYIVTDQAGTPRELCTENGDIEWRGEQSLWGEHHKWRLSVQAKSKHKKYLE 1498 Query: 257 EENPHQLQQLIRLPGQQYDEESGLYYNRHRYYDPLQGRYITQDPIGLKGGWNFYQYPLNP 316 + + +R GQ +D E+GLYYNRHRYYDP +Y++ DPIG+ GG Y NP Sbjct: 1499 DAANDPVNCDLRYQGQVFDSETGLYYNRHRYYDPETCQYLSPDPIGMAGGLRTQAYVHNP 1558 Query: 317 VQYIDSMGLASKYGH 331 ++++D GLA+ Sbjct: 1559 MEWVDPFGLAACPTA 1573 Score = 88.3 bits (217), Expect = 6e-16, Method: Composition-based stats. Identities = 45/276 (16%), Positives = 68/276 (24%), Gaps = 54/276 (19%) Query: 2 WPDNRI-----ARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHY 56 W DN++ A + YD G++ + D Y YD RL+ + Sbjct: 726 WLDNQLVAQSNALGERTEFSYDAWGQVEQVIAA---------DGSVTSYQYDDNGRLIGH 776 Query: 57 TRTQYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQ 116 A +Y YD G Q +Y + Sbjct: 777 INPLGA----TWKYEYDVQGNLTCMSDP--------------LNQQWFYQYTSLGQVAWV 818 Query: 117 NDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQM 176 QT YQ L + GE L Q+ SV + Sbjct: 819 ISPEGAQTGYQYNDSGQLTEILPPLGEKLMLDYDVLGRLSTQTRVSSEASVGEGVAAER- 877 Query: 177 LDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALV 236 + +RW L + D + Y D G Sbjct: 878 --------------KRVQRWHYQGSLPYPRAITHEDGTQSV------YDYDIEGNVTRFT 917 Query: 237 STEGATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQ 272 G EY + +L +P + R G+ Sbjct: 918 DALGHQF-HYEYGAFDKMLASLDPQGAKTQYRYNGE 952 Score = 58.7 bits (140), Expect = 5e-07, Method: Composition-based stats. Identities = 35/256 (13%), Positives = 63/256 (24%), Gaps = 33/256 (12%) Query: 8 ARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVE 67 A Y YD GRLT+K + I + + YD +L+ Sbjct: 1003 ADGTSLHYFYDAVGRLTQKQSRDLDARITGN----TYFEYDEASQLLKAE-----NDHAL 1053 Query: 68 SRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQ 127 + YD LGRR+ +++ + R R+ + Sbjct: 1054 IEFEYDELGRRITEQLNGHRVSSQYTNTGLRS-----------RIERENTEGESYHPAAD 1102 Query: 128 PGSFT-PLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILA 186 F L +++ S Q++ +G L +++ Sbjct: 1103 AIEFNWQLGQLKGLQIGAYHPLAFSHNQLGQETKRSNGLGFHLAQQHGPDGLLLNQQLIP 1162 Query: 187 DRVSEESRRWLASCG-LTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTE------ 239 ES S V Q + Y + + + Sbjct: 1163 SAHHAESLMGEGSEPFNNVHQATARGKGDSRYQHLQRSYQYNALNQISQIDDSHWGLSEF 1222 Query: 240 -----GATEWCAEYDE 250 G +Y Sbjct: 1223 EHNSVGQITQHKQYAP 1238 Score = 58.7 bits (140), Expect = 5e-07, Method: Composition-based stats. Identities = 34/233 (14%), Positives = 71/233 (30%), Gaps = 32/233 (13%) Query: 15 YRYDRHGRLTEKTDLIPEG------------VIRTDDERTHRYHYDSQHRLVHYTRTQYA 62 Y YD G +T TD + +Y Y+ + + +Q Sbjct: 905 YDYDIEGNVTRFTDALGHQFHYEYGAFDKMLASLDPQGAKTQYRYNGECQFEGVINSQ-- 962 Query: 63 EPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTW---------YGWDGDRLT 113 E Y Y+ G+ + +R + + R T Y G RLT Sbjct: 963 --QQEWCYHYNTSGQIIEERHYDGRITKFTYEGAGRISSKTAADGTSLHYFYDAVG-RLT 1019 Query: 114 TIQ----NDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVF 169 Q + R T ++ + L++ E L + + L + + S + Sbjct: 1020 QKQSRDLDARITGNTYFEYDEASQLLKAEN-DHALIEFEYDELGRRITEQLNGHRVSSQY 1078 Query: 170 PPVLVQ-MLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKI 221 ++ ++R +E + + ++ + G P+ ++ Sbjct: 1079 TNTGLRSRIERENTEGESYHPAADAIEFNWQLGQLKGLQIGAYHPLAFSHNQL 1131 Score = 55.6 bits (132), Expect = 4e-06, Method: Composition-based stats. Identities = 29/196 (14%), Positives = 59/196 (30%), Gaps = 20/196 (10%) Query: 16 RYDRHGRLTEKTDLIPEGVIRTD----DERTHRYHYDSQHRL---VHYTRTQYAEPLVES 68 YD GRL+ +T + E + +R R+HY Q L T + + Sbjct: 850 DYDVLGRLSTQTRVSSEASVGEGVAAERKRVQRWHY--QGSLPYPRAITHEDGTQSV--- 904 Query: 69 RYLYDPLGRRVAKRVWRRERDLTGWM-------SLSRKPQVTWYGWDGDRLTTIQNDRTR 121 Y YD G + + SL + T Y ++G+ + + Sbjct: 905 -YDYDIEGNVTRFTDALGHQFHYEYGAFDKMLASLDPQGAKTQYRYNGECQFEGVINSQQ 963 Query: 122 IQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLE 181 + Y + +I G + K ++ + F + ++ + Sbjct: 964 QEWCYHYNTSGQIIEERHYDGRITKFTYEGAGRISSKTAADGTSLHYFYDAVGRLTQKQS 1023 Query: 182 SEILADRVSEESRRWL 197 ++ A + Sbjct: 1024 RDLDARITGNTYFEYD 1039 Score = 46.7 bits (109), Expect = 0.002, Method: Composition-based stats. Identities = 46/366 (12%), Positives = 99/366 (27%), Gaps = 42/366 (11%) Query: 53 LVHYTRTQYAEPLVESRYLYD---------PLGRRVAK--RVWRRERDLTGWMSLSRKPQ 101 L + + +LYD G+++ R + L+ Sbjct: 559 LTKISDGKGNSN----HFLYDRGTLKQIVLADGQQIQVDCHHHRISKLTLLDSELNPIQT 614 Query: 102 VTWYGWDGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGG 161 + Y +D YQ L+R + + + G Sbjct: 615 LARYEYDRHGQMLSCRAAPGCSFDYQYSEEGYLLRWSDLSQTWVEHDYDDKGRAIASRGA 674 Query: 162 EDGGSVVFPPV-------LVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPV 214 E S +D ++ +R + + + E + NQ+ Sbjct: 675 EGRFSDQIRFDDANRIVYYKSAIDGIQQYYHDERNNIVRIIFPNGDEIHNEWLDNQLVAQ 734 Query: 215 YTPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQ-- 272 + + D G +++ +G+ +YD+ G L+ NP Q Sbjct: 735 SNALGERTEFSYDAWGQVEQVIAADGSVT-SYQYDDNGRLIGHINPLGATWKYEYDVQGN 793 Query: 273 ---QYDEESGLYYNRHRYYDPLQGR--YITQDPIGLKGGWNFYQYPLNPVQYID---SMG 324 D + ++ ++ G+ ++ I +G YQY + Q + +G Sbjct: 794 LTCMSDPLNQQWFYQY----TSLGQVAWV----ISPEGAQTGYQY-NDSGQLTEILPPLG 844 Query: 325 LASKYGHLNNGGYGARPNKPPTPDPSKLPDIAKQLRLPYPIDQASSAPNVFKTFFRALSP 384 + G + + ++ + + P S Sbjct: 845 EKLMLDYDVLGRLSTQTRVSSEASVGEGVAAERKRVQRWHYQGSLPYPRAITHEDGTQSV 904 Query: 385 YDYTLY 390 YDY + Sbjct: 905 YDYDIE 910 >UniRef50_C7Q0A7 YD repeat protein n=2 Tax=Catenulispora acidiphila DSM 44928 RepID=C7Q0A7_CATAD Length = 1528 Score = 191 bits (485), Expect = 5e-47, Method: Composition-based stats. Identities = 69/304 (22%), Positives = 105/304 (34%), Gaps = 25/304 (8%) Query: 48 DSQHRLVHYTRTQYAEPLVESRYLYDPLGRRVAK----------RVWRRERDLTGWMSLS 97 D+ R+ + Y YD G + E +L Sbjct: 1102 DAAGRVTAIS-----AHSWSESYAYDAFGNLTVQDDAAGPLNLPATAAGEGAGFATRTLI 1156 Query: 98 RKPQVTWYGWD-GDRLTTIQN---DRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLA 153 R+ Y D RLT D T Y S L+ V T L Sbjct: 1157 RRSARARYEHDQAGRLTRSVRRTLDGRSKVTQYVWDSEDRLVHVITPENGTWHYSYDPLG 1216 Query: 154 DTLQQSGGEDGGSVVFPPVLVQMLDRLESEILAD-RVSEESRRWLASCGLTVEQMQNQMD 212 ++ D G+VV + RL + + + W G Q + + Sbjct: 1217 RRTAKTRFADDGTVVDRVTFLWDGPRLAEQSVQGPESFTVTLTWDYDPGTFRPATQRRRN 1276 Query: 213 PVYTPARKI-----HLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLI 267 + + + H D G P LV+ +G W WG + + + Sbjct: 1277 RLGDADQTVIDEAFHAIVADLVGSPTELVTPDGRVVWHTTTSLWGRTIGTSAESGVDCPL 1336 Query: 268 RLPGQQYDEESGLYYNRHRYYDPLQGRYITQDPIGLKGGWNFYQYPLNPVQYIDSMGLAS 327 R PGQ +D+ESGL+YN +RYYD Y+T DP+GL N + Y NP+ D +GL+ Sbjct: 1337 RFPGQYHDDESGLHYNLNRYYDSETAAYLTPDPLGLVPAPNDHAYVPNPLTVSDPLGLSY 1396 Query: 328 KYGH 331 + + Sbjct: 1397 EGPN 1400 Score = 82.5 bits (202), Expect = 3e-14, Method: Composition-based stats. Identities = 46/238 (19%), Positives = 77/238 (32%), Gaps = 32/238 (13%) Query: 7 IARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLV 66 I R A Y +D+ GRLT +G + +Y +DS+ RLVH + Sbjct: 1156 IRRSARARYEHDQAGRLTRSVRRTLDGRS-----KVTQYVWDSEDRLVHVITPENG---- 1206 Query: 67 ESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDR-----TR 121 Y YDPLGRR AK + + + + WDG RL Sbjct: 1207 TWHYSYDPLGRRTAKTRFADDGTVV---------DRVTFLWDGPRLAEQSVQGPESFTVT 1257 Query: 122 IQTIYQPGSFTPLI-RVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRL 180 + Y PG+F P R G+ +T + +V P +++ Sbjct: 1258 LTWDYDPGTFRPATQRRRNRLGDADQTVIDEAFHAIVADLVGSPTELVTPD--GRVVWHT 1315 Query: 181 ESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIH------LYHCDHRGLP 232 + + + + + Q + ++ + + D GL Sbjct: 1316 TTSLWGRTIGTSAESGVDCPLRFPGQYHDDESGLHYNLNRYYDSETAAYLTPDPLGLV 1373 Score = 79.1 bits (193), Expect = 3e-13, Method: Composition-based stats. Identities = 55/302 (18%), Positives = 76/302 (25%), Gaps = 71/302 (23%) Query: 10 DAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQY-------- 61 A + Y YD GRLT ++D I + Y YD RL Sbjct: 862 GAAWTYTYDAAGRLTGESDFIGRRLG---------YEYDVAGRLCARITGTGQRLTLDRD 912 Query: 62 --------AEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLT 113 P + Y YD GR V E Y G L Sbjct: 913 ATGRIVARHTPEGDYGYTYDSAGRLVVATGPNSELSY-------------EYDTLGRLLA 959 Query: 114 TIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVL 173 T +DRT Y LIR TA+G + S + G D F Sbjct: 960 TTTDDRTM---RYSYDLAGRLIRRTTASGVESTWTYDSAGRAVGLDTGGDRLEFGFDASG 1016 Query: 174 VQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHL---------- 223 ++ + SE+ R + R +A + +Q Sbjct: 1017 REIERLIGSEVWLTRSYDVVGRPIAQSVGRGRRHHDQAAQTDLIIAGSRTGKAVQEVLQR 1076 Query: 224 ------------YHCDHRGLPLALVSTEGATE--------WCAEYDEWGNLLNEENPHQL 263 RG G YD +GNL +++ Sbjct: 1077 SWVWRQDGVPEEIRDSLRGTSRIASDAAGRVTAISAHSWSESYAYDAFGNLTVQDDAAGP 1136 Query: 264 QQ 265 Sbjct: 1137 LN 1138 Score = 65.2 bits (157), Expect = 6e-09, Method: Composition-based stats. Identities = 42/277 (15%), Positives = 77/277 (27%), Gaps = 41/277 (14%) Query: 14 LYRYDRHGRLTEK------------TDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQY 61 + YD GRLT D + YHYD+ R+V Sbjct: 531 RFSYDGQGRLTGVINSSDVPFSYEWNDTDRISAWTDQAGYRYGYHYDAIGRVVR-----G 585 Query: 62 AEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTR 121 + + YDP R + VT + +D + + D Sbjct: 586 QGQFLAGSFTYDPAHRTTVHT--------------NSLGHVTTFVYDENGHVCSETDALG 631 Query: 122 IQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQML---- 177 T+ + + ++ A G T R A +++ DG + + + Sbjct: 632 HTTLTETDRYGMILSRTDALGTR-TTLVRDEAGNVRRLVATDGATAELEYNHLHQVVAAT 690 Query: 178 --DRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPA--RKIHLYHCDHRGLPL 233 D + G+T + + T + + D GLP+ Sbjct: 691 GRGGATWRRAHDDRGNLVSATDPAGGVTEFEYTAEGVLAATTDPLGAVTRFTTDAAGLPV 750 Query: 234 ALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRLP 270 ++ G+ E D G ++ +P Sbjct: 751 TVLDAVGSLT-RVERDFAGRVVRLTDPMGAVTAFEWN 786 Score = 61.4 bits (147), Expect = 7e-08, Method: Composition-based stats. Identities = 48/289 (16%), Positives = 76/289 (26%), Gaps = 47/289 (16%) Query: 7 IARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLV 66 + A +R+D GRL E D I L T V Sbjct: 796 LPDGARTTWRHDDGGRLLEVVDAIGATTRFEPGPMET---------LTARTGPDG----V 842 Query: 67 ESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTIY 126 + YD + VA Y +D T ++D + Y Sbjct: 843 RHNFTYDSELKLVAVTNPHGAA--------------WTYTYDAAGRLTGESDFIGRRLGY 888 Query: 127 QPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILA 186 + L T TG+ R + + + E + + Sbjct: 889 EYDVAGRLCARITGTGQRLTLDRDATGRIVARHTPEGDYGYTYDSAGRL-------VVAT 941 Query: 187 DRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWCA 246 SE S + L T + Y D G + + G E Sbjct: 942 GPNSELSYEYDTLGRLL----------ATTTDDRTMRYSYDLAGRLIRRTTASG-VESTW 990 Query: 247 EYDEWGNLLN-EENPHQLQQLIRLPGQQYDEESGLYYNRHRYYDPLQGR 294 YD G + + +L+ G++ + G R YD + GR Sbjct: 991 TYDSAGRAVGLDTGGDRLEFGFDASGREIERLIGSEVWLTRSYD-VVGR 1038 Score = 59.8 bits (143), Expect = 2e-07, Method: Composition-based stats. Identities = 68/465 (14%), Positives = 116/465 (24%), Gaps = 63/465 (13%) Query: 48 DSQHRLVHYTRTQYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVT---- 103 D + R ++ P Y RVA + T Sbjct: 473 DRNGNRITVLRDEHGTPTGLEHPAY-----RVAVDTIASAAGPRVSGLRLLGARETGSDM 527 Query: 104 ---WYGWDGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSG 160 + +DG T + + + Y+ + G ++ ++ G Sbjct: 528 VMKRFSYDGQGRLTGVINSSDVPFSYEWNDTDRISAWTDQAGYRYGYHYDAIGRVVRGQG 587 Query: 161 GEDGGSVVFPPVLVQMLD----RLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYT 216 GS + P + + + D A T+ + + Sbjct: 588 QFLAGSFTYDPAHRTTVHTNSLGHVTTFVYDENGHVCSETDALGHTTLTETDRYGMILSR 647 Query: 217 PA--RKIHLYHCDHRGLPLALVSTEGAT--------------------EWCAEYDEWGNL 254 D G LV+T+GAT W +D+ GNL Sbjct: 648 TDALGTRTTLVRDEAGNVRRLVATDGATAELEYNHLHQVVAATGRGGATWRRAHDDRGNL 707 Query: 255 LNEENPHQLQQLIRLPGQQYDEESGLYYNRHRYYDP--LQGRYITQDPIGLK-------G 305 ++ +P + + DP R+ T D GL G Sbjct: 708 VSATDPAGGVTEFEYTAEGVLAATT---------DPLGAVTRFTT-DAAGLPVTVLDAVG 757 Query: 306 GWNFYQ--YPLNPVQYIDSMGLASKYGHLNNGGYGARPNKPPTPDPSKLPDIAKQLRLPY 363 + + V+ D MG A N G P + D +L Sbjct: 758 SLTRVERDFAGRVVRLTDPMG-AVTAFEWNAEGLPVSRTLPDGARTTWRHDDGGRLLEVV 816 Query: 364 PIDQASSA--PNVFKTFFRALSPYDYTLYCRKWVKPNLTCTPQDDSQYPGMDTKTASDYL 421 A++ P +T P + L A Sbjct: 817 DAIGATTRFEPGPMETLTARTGPDGVRHNFTYDSELKLVAVTNPHGAAWTYTYDAAGRLT 876 Query: 422 PQTNWPTTQLPPGYTCAEPYLFPDINKPDGPATAGIDDLGEILAK 466 ++++ +L Y A L I T D G I+A+ Sbjct: 877 GESDFIGRRLGYEYDVAGR-LCARITGTGQRLTLDRDATGRIVAR 920 Score = 58.7 bits (140), Expect = 5e-07, Method: Composition-based stats. Identities = 45/263 (17%), Positives = 73/263 (27%), Gaps = 34/263 (12%) Query: 12 HYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYL 71 Y Y YD GR+ + YD HR T + ++ Sbjct: 571 RYGYHYDAIGRVVR----------GQGQFLAGSFTYDPAHR----TTVHTNSLGHVTTFV 616 Query: 72 YDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQPGS- 130 YD G ++ LT T G R T ++++ ++ + Sbjct: 617 YDENGHVCSETDALGHTTLTETDRYGMILSRT--DALGTRTTLVRDEAGNVRRLVATDGA 674 Query: 131 -----FTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEIL 185 + L +V ATG T RR+ D D V + Sbjct: 675 TAELEYNHLHQVVAATGRGGATWRRAHDDRGNLVSATDPAGGVTEFEYTAEGVLAATT-- 732 Query: 186 ADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWC 245 D + +R + GL V + D G + L GA Sbjct: 733 -DPLGAVTRFTTDAAGLPVTVLDAVGSLTRVE--------RDFAGRVVRLTDPMGAVTA- 782 Query: 246 AEYDEWGNLLNEENPHQLQQLIR 268 E++ G ++ P + R Sbjct: 783 FEWNAEGLPVSRTLPDGARTTWR 805 Score = 57.9 bits (138), Expect = 8e-07, Method: Composition-based stats. Identities = 35/304 (11%), Positives = 62/304 (20%), Gaps = 45/304 (14%) Query: 8 ARDAHYLYRYDRHGRLTEKTDLIPE------------GVIRTDDERTHRYHYDSQ----- 50 A + +D G L TD R+ D+ Sbjct: 692 RGGATWRRAHDDRGNLVSATDPAGGVTEFEYTAEGVLAATTDPLGAVTRFTTDAAGLPVT 751 Query: 51 -----HRLVHYTRTQYAEP-------LVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSR 98 L R + + ++ G V++ + R R Sbjct: 752 VLDAVGSLTRVERDFAGRVVRLTDPMGAVTAFEWNAEGLPVSRTLPDGARTTWRHDDGGR 811 Query: 99 K-------PQVTWYGWDGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRS 151 T + T + ++ + S L+ V G + Sbjct: 812 LLEVVDAIGATTRFEPGPMETLTARTGPDGVRHNFTYDSELKLVAVTNPHGAAWTYTYDA 871 Query: 152 LADTLQQSGGEDGGSVVFPPVLVQM------LDRLESEILADRVSEESRRWLASCGLTVE 205 L G + + + + D R Sbjct: 872 AG-RLTGESDFIGRRLGYEYDVAGRLCARITGTGQRLTLDRDATGRIVARHTPEGDYGYT 930 Query: 206 QMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQ 265 V T Y D G LA + + YD G L+ ++ Sbjct: 931 YDSAGRLVVATGPNSELSYEYDTLGRLLATTTDDRTM--RYSYDLAGRLIRRTTASGVES 988 Query: 266 LIRL 269 Sbjct: 989 TWTY 992 >UniRef50_A6M1K5 YD repeat protein n=4 Tax=Clostridium RepID=A6M1K5_CLOB8 Length = 2553 Score = 191 bits (484), Expect = 6e-47, Method: Composition-based stats. Identities = 71/351 (20%), Positives = 120/351 (34%), Gaps = 30/351 (8%) Query: 12 HYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYL 71 Y Y YD +G +K + + Y YDS +RLV + Sbjct: 2036 DYNYAYDLNGNRLQKVS----------SKHKNFYSYDSMNRLVDSRYDDRC-----ESFT 2080 Query: 72 YDPLGRRVAKRVWRRERDLTGWM-----SLSRKPQVTWYGWDGDRLTTIQNDRTRIQTIY 126 YD +G R+ K + L + + +D T I+ + I+ Sbjct: 2081 YDKVGNRLTKTTNDITEKYVYNVKNQLKELHNNSGINHFTYDKQGNT-IKEETQNGNNIF 2139 Query: 127 QPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILA 186 + S ++ T G ++ + + E +F V +E++ Sbjct: 2140 EYNSLNQQVKAITKEGNTLVSRYDTEGLRAEIEENEKLTKFIFHKENVL----VEADKDF 2195 Query: 187 DRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWCA 246 + +S +R + VE + D ++ + Y D +G + + + Sbjct: 2196 NAISRFTRGYEVVAADIVEASKYS-DSKFSSNIGRYYYTTDEQGSTVLITDKYRNVKNEY 2254 Query: 247 EYDEWGNLLNEENPHQLQQLIRLPGQQYDEESGLYYNRHRYYDPLQGRYITQDPIGLKGG 306 YD + N+L Q+ + GQQYD + YY R R+Y+PL GR+ +D I G Sbjct: 2255 YYDPFCNVLGSN--EQVHNRVTYTGQQYDSITKQYYLRARFYNPLIGRFAQED-IYRGDG 2311 Query: 307 WNFYQYP-LNPVQYIDSMGLASKYGHLNNGGYGARPNKPPTPDPSKLPDIA 356 N Y Y NPV+Y D G A + P Sbjct: 2312 LNLYAYCGNNPVRYYDPSGYAFLDNLQYDSLKDIAKRMRQVPGKKAKYGYW 2362 Score = 86.8 bits (213), Expect = 2e-15, Method: Composition-based stats. Identities = 50/323 (15%), Positives = 92/323 (28%), Gaps = 75/323 (23%) Query: 13 YLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYLY 72 Y YD +G L ++TD + +I Y YDSQ L+ A + R+ Y Sbjct: 1065 TDYTYDENGNLIKETDNEDKEII---------YTYDSQGNLLEKKTKLSAANWITERFTY 1115 Query: 73 DPLGRRVAKRVWRRERDLTGWMSLSRKPQ---------------VTWYGW---------- 107 D GR ++K + + S Y + Sbjct: 1116 DSYGRILSKTDGNGNTSKYEYENASSLEGKQGKDPVRVITSSGYEYEYTYDKVGRNTEIT 1175 Query: 108 --------------------DGDRLTTIQNDRTRIQ-------------------TIYQP 128 D + TI+N Y Sbjct: 1176 TDYGTIEFGYNNLNFVASIKDANGNVTIKNYDNMGNLTSLYTPNACIKGSISDEGYKYTY 1235 Query: 129 GSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESE--ILA 186 LI ++ G + K R S + +++ + + V+ ++ Sbjct: 1236 DHMDRLISIKNPIGIIEKNIRDSEGNIIKEINPNYYNPETYDGIGVEYAYDKDNRKIKTI 1295 Query: 187 DRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWCA 246 R + S G ++ + + T + Y D ++++ +G E Sbjct: 1296 YPDGGIERFFYDSNGNVIKHISPEYYNEETDDGLGYSYTYDSTNRLSSIINEDGVVEKRF 1355 Query: 247 EYDEWGNLLNEENPHQLQQLIRL 269 EYD GN++ E + L + Sbjct: 1356 EYDLHGNIIKEVDVEGNSTLFKY 1378 Score = 70.2 bits (170), Expect = 1e-10, Method: Composition-based stats. Identities = 39/310 (12%), Positives = 79/310 (25%), Gaps = 53/310 (17%) Query: 10 DAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESR 69 + YD RL E D RY YD ++ + + Sbjct: 1433 YHEIYFEYDEENRLIEVKDKYGAKA---------RYKYDCLNKKTYESFKINDTTTKAIH 1483 Query: 70 YLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQN------------ 117 Y+YD +G K+ ++ +T Y +D + T Sbjct: 1484 YIYDKVGNLTQKKEEINGGFVSPETKGRNVWAITSYEYDKNGNITKITTPKGYEIGRVYD 1543 Query: 118 --------------DRTRIQTIYQPGSFTPLIRVETATGE---------LAKTQRRSLAD 154 + +Y +I + +GE ++ Sbjct: 1544 KADRVIEQHEKDEANGIFRSYVYNYDKTDNIISISEYSGEEAKLISNKYTSENNYMVHWS 1603 Query: 155 TLQQSGGEDGGSVVFPPVLVQMLDRLESEILADR-------VSEESRRWLASCGLTVEQM 207 ++ E+ + + + +R +R + ++Q+ Sbjct: 1604 ERYENRKENEKLFEKIGFKEEQKKKAYTYDSQNRLTHFINFSGNITRLFYDKNDRIIKQV 1663 Query: 208 QNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLI 267 + Y + +G + + + G T YD GNL + + Sbjct: 1664 LPEQYDNEKDDGVGTTYSYNLKGQVIEVKNALGETVTKNTYDPKGNLKTRVDGENNKVEY 1723 Query: 268 RLP--GQQYD 275 GQ D Sbjct: 1724 TYTLLGQIKD 1733 Score = 69.8 bits (169), Expect = 2e-10, Method: Composition-based stats. Identities = 56/434 (12%), Positives = 121/434 (27%), Gaps = 76/434 (17%) Query: 9 RDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVES 68 Y+YD + D + YD L+ T + + Sbjct: 1019 DGTTEEYKYDDYQNKIYIKDR---------NGFETHKVYDEFGNLLKETLPNG----LVT 1065 Query: 69 RYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQ-----------VTWYGWDGDRLTTIQN 117 Y YD G + + + + + S + + +D + Sbjct: 1066 DYTYDENGNLIKETDNEDKEIIYTYDSQGNLLEKKTKLSAANWITERFTYDSYGRILSKT 1125 Query: 118 DRTRIQTIYQPGSFTPL--------IRVETATGELAKTQRRSLADTLQQSGGEDGGSVVF 169 D + Y+ + + L +RV T++G + + + + + Sbjct: 1126 DGNGNTSKYEYENASSLEGKQGKDPVRVITSSGYEYEYTYDKVGRNTEI-------TTDY 1178 Query: 170 PPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHR 229 + + + D + + + G + + + + Y DH Sbjct: 1179 GTIEFGYNNLNFVASIKDANGNVTIKNYDNMGNLTSLYTPNACIKGSISDEGYKYTYDHM 1238 Query: 230 GLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRLPG----QQYDEESGLYYNRH 285 +++ + G D GN++ E NP+ G YD+++ Sbjct: 1239 DRLISIKNPIG-IIEKNIRDSEGNIIKEINPN-YYNPETYDGIGVEYAYDKDNRKIKT-- 1294 Query: 286 RYYDPLQGRYITQDPIGLKGGWNFYQY--PLNPVQYIDS--------MGLASKYGHLNNG 335 I GG + Y N +++I GL Y + + Sbjct: 1295 ---------------IYPDGGIERFFYDSNGNVIKHISPEYYNEETDDGLGYSYTYDSTN 1339 Query: 336 GYGARPNKPPTPDPSKLPDIAKQLRLPYPIDQASS--APNVFKTFFRALSPYDYTLYCRK 393 + N+ + D+ + ++ S+ ++ P + Sbjct: 1340 RLSSIINEDGVVEKRFEYDLHGNIIKEVDVEGNSTLFKYDLAGNLIEKRVPAEKD--NIG 1397 Query: 394 WVKPNLTCTPQDDS 407 VK NLTC D + Sbjct: 1398 NVKYNLTCYAYDKN 1411 Score = 64.4 bits (155), Expect = 8e-09, Method: Composition-based stats. Identities = 37/262 (14%), Positives = 63/262 (24%), Gaps = 21/262 (8%) Query: 16 RYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYA-EPLVESRYLYDP 74 YD G L + D V Y Y ++ E Y YD Sbjct: 1703 TYDPKGNLKTRVDGENNKVE---------YTYTLLGQIKDIVTPNSRKENKSAQSYKYDA 1753 Query: 75 LGRRVAKRVWRRERDLTGWMSLSRKPQVTW-------YGWDGDRLTTIQNDRTRIQTIYQ 127 G R Q+T Y +D T D Y Sbjct: 1754 RGNITGITDGNGNETSYLLDDWGRIIQITTPEGGSEKYTYDYAGNITSTTDANGGTIEYI 1813 Query: 128 PGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILAD 187 S + ++ + ++ A + F V + R S Sbjct: 1814 YNSLGQVCEIKDQEEIALEARKAEEAREKAMEEAKKKAEENFYGVSLNQAPRRRSFTERI 1873 Query: 188 RVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWCAE 247 + +E VE+ ++ + Y+ D G + G ++ Sbjct: 1874 KDKKEREDIEEHQLSKVEKEEDPNKNKLNVIDQRFKYNPD--GSLKSAY--TGNMQYEYS 1929 Query: 248 YDEWGNLLNEENPHQLQQLIRL 269 Y G L ++ + Sbjct: 1930 YSIEGMLESKSASGRTLLKYTY 1951 Score = 59.1 bits (141), Expect = 4e-07, Method: Composition-based stats. Identities = 19/96 (19%), Positives = 32/96 (33%), Gaps = 13/96 (13%) Query: 3 PDNRIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYA 62 P++R + Y+YD G +T TD + Y D R++ T + Sbjct: 1737 PNSRKENKSAQSYKYDARGNITGITD---------GNGNETSYLLDDWGRIIQITTPEGG 1787 Query: 63 EPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSR 98 +Y YD G + + SL + Sbjct: 1788 S----EKYTYDYAGNITSTTDANGGTIEYIYNSLGQ 1819 Score = 58.3 bits (139), Expect = 7e-07, Method: Composition-based stats. Identities = 31/256 (12%), Positives = 65/256 (25%), Gaps = 37/256 (14%) Query: 13 YLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYA-------EPL 65 Y YD G ++ TD + +D + R++ + Sbjct: 937 TRYTYDDKGYISSITDQNGHTYTKNF--------FDKKGRVIRQDFPNDDTCKIAYDDSE 988 Query: 66 VESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYG------------------- 106 E + Y +R + + +E +T + Y Sbjct: 989 KEVTFYYTK-SQRTERTRFNKEGLITHLFYEDGTTEEYKYDDYQNKIYIKDRNGFETHKV 1047 Query: 107 WDGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGS 166 +D + + T Y LI+ + S + L++ + Sbjct: 1048 YDEFGNLLKETLPNGLVTDYTYDENGNLIKETDNEDKEIIYTYDSQGNLLEKKTKLSAAN 1107 Query: 167 VVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHC 226 + R+ S+ D S+ + + V T + + Y Sbjct: 1108 WITERFTYDSYGRILSK--TDGNGNTSKYEYENASSLEGKQGKDPVRVITSSGYEYEYTY 1165 Query: 227 DHRGLPLALVSTEGAT 242 D G + + G Sbjct: 1166 DKVGRNTEITTDYGTI 1181 Score = 49.0 bits (115), Expect = 4e-04, Method: Composition-based stats. Identities = 29/235 (12%), Positives = 60/235 (25%), Gaps = 17/235 (7%) Query: 40 ERTHRYHYDSQHRLVHYTRTQYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRK 99 RT +Y YD + L +RY YD G + + + Sbjct: 914 GRTVQYKYDGDY-LKDVIHVDQG----ITRYTYDDKGYISSITDQNGHTYTKNFFDKKGR 968 Query: 100 PQVTWYGWDGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQS 159 + D + + Y T R + + Sbjct: 969 VIRQDFPNDDTCKIAYDDSEKEVTFYYTKSQRTERTRFNKEGLITHLFYEDGTTEEYKYD 1028 Query: 160 GGEDGGSVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPAR 219 + ++ + E+ + D + L + +T + + Sbjct: 1029 D-------YQNKIYIKDRNGFETHKVYDEFGNLLKETLPNGLVTDYTYDENGNLIKETDN 1081 Query: 220 --KIHLYHCDHRGLPLA---LVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRL 269 K +Y D +G L +S YD +G +L++ + + Sbjct: 1082 EDKEIIYTYDSQGNLLEKKTKLSAANWITERFTYDSYGRILSKTDGNGNTSKYEY 1136 Score = 49.0 bits (115), Expect = 4e-04, Method: Composition-based stats. Identities = 32/229 (13%), Positives = 56/229 (24%), Gaps = 35/229 (15%) Query: 15 YRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVH----YTRTQYAEPLVESRY 70 Y YD RLT R YD R++ + V + Y Sbjct: 1630 YTYDSQNRLTH---------FINFSGNITRLFYDKNDRIIKQVLPEQYDNEKDDGVGTTY 1680 Query: 71 LYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQPGS 130 Y+ G+ + + +L Y G+ T + + +++ Y Sbjct: 1681 SYNLKGQVIEVK-----------NALGETVTKNTYDPKGNLKTRVDGENNKVEYTYTLLG 1729 Query: 131 FTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVS 190 I + E Q +G DG + +I Sbjct: 1730 QIKDIVTPNSRKENKSAQSYKYDARGNITGITDGNGN--ETSYLLDDWGRIIQITTPEGG 1787 Query: 191 EESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTE 239 E + + +T N Y + G + E Sbjct: 1788 SEKYTYDYAGNITSTTDANGGTIE---------YIYNSLGQVCEIKDQE 1827 Score = 44.8 bits (104), Expect = 0.006, Method: Composition-based stats. Identities = 35/277 (12%), Positives = 70/277 (25%), Gaps = 35/277 (12%) Query: 24 TEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYLYDPLGRRVAKRV 83 K + + + R+ Y+ L + Y Y G +K Sbjct: 1887 LSKVEKEEDPNKNKLNVIDQRFKYNPDGSLKSAYTGNM-----QYEYSYSIEGMLESKSA 1941 Query: 84 WRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGE 143 R + Y +D + D T +IY + ++ Sbjct: 1942 SGRT--------------LLKYTYDKNNNIKTIKDITGKSSIYSYDDADRVKLIQDDKQN 1987 Query: 144 LAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLT 203 + D+++ +G + + L + V + G Sbjct: 1988 NLAIYDYNKNDSIKSVRLGNGLKTDYTYDGDGNVQSLVTISSNGEVLVDYNYAYDLNGNR 2047 Query: 204 VEQMQNQMDPVYTPARKIHL-----------YHCDHRGLPLALVSTEGATEWCAEYDEWG 252 ++++ ++ Y+ L + D G L T Y+ Sbjct: 2048 LQKVSSKHKNFYSYDSMNRLVDSRYDDRCESFTYDKVGN--RLTKTTNDITEKYVYNV-K 2104 Query: 253 NLLNEENPHQLQQLIRL--PGQQYDEESGLYYNRHRY 287 N L E + + G EE+ N Y Sbjct: 2105 NQLKELHNNSGINHFTYDKQGNTIKEETQNGNNIFEY 2141 >UniRef50_P32109 Putative uncharacterized protein yibJ n=14 Tax=Bacteria RepID=YIBJ_ECOLI Length = 233 Score = 190 bits (483), Expect = 8e-47, Method: Composition-based stats. Identities = 140/182 (76%), Positives = 151/182 (82%) Query: 175 QMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLA 234 QMLDRLESEILADRVSEESRRWLASCGLTVEQM+NQMDPVYTPARKIHLYHCDHRGLPLA Sbjct: 2 QMLDRLESEILADRVSEESRRWLASCGLTVEQMKNQMDPVYTPARKIHLYHCDHRGLPLA 61 Query: 235 LVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEESGLYYNRHRYYDPLQGR 294 L+STEGAT WCAEYDEWGNLL++ENPH LQQLIRLPGQQYDEESGLYYNRHRYYDPL GR Sbjct: 62 LISTEGATAWCAEYDEWGNLLSDENPHHLQQLIRLPGQQYDEESGLYYNRHRYYDPLLGR 121 Query: 295 YITQDPIGLKGGWNFYQYPLNPVQYIDSMGLASKYGHLNNGGYGARPNKPPTPDPSKLPD 354 YITQDPIGLKGGWNFYQYPLNPV +D GL + + + ++ P + Sbjct: 122 YITQDPIGLKGGWNFYQYPLNPVINVDPQGLVDINLYPESDLIHSVADEINIPGVFTIGG 181 Query: 355 IA 356 Sbjct: 182 HG 183 >UniRef50_Q1IA36 Insecticidal toxin, SepC/Tcc class n=1 Tax=Pseudomonas entomophila L48 RepID=Q1IA36_PSEE4 Length = 990 Score = 190 bits (483), Expect = 9e-47, Method: Composition-based stats. Identities = 62/371 (16%), Positives = 101/371 (27%), Gaps = 49/371 (13%) Query: 8 ARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERT--HRYHYDSQHRLVHYTRTQYAEPL 65 Y +D G + + E + + Y YDS ++LV + A Sbjct: 323 KVLQDLRYAFDPVGNVISVRNDAQEARFWHNQKVVPESTYLYDSLYQLVQAQGREMASAG 382 Query: 66 V----------------------ESRYLYDPLGRRVAKRVWRRERD-LTGWMSLSRKPQV 102 Y YD G R T M++S + Sbjct: 383 QQGPQLPPVIVPIPVDNSAYTNYTRTYRYDNAGNLTQIRHSPATGTGYTTDMTISDRSNR 442 Query: 103 --------------TWYGWDGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQ 148 + G ++ + + R + + + Sbjct: 443 GVQRALTDNPAEVDALFTAGGQQILLQPGQPLSWTPRLELLQVNGVTRAKAED-DRESYR 501 Query: 149 RRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSEESRRWL----ASCGLTV 204 S + + + G + V + + D E + A Sbjct: 502 YDSASQRILKVGFKVSSGVTHTHQTLYLPGLELQTKALDGAQTEHLHVIVVGEAGRAQVR 561 Query: 205 EQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLL---NEENPH 261 P ++ D G + EG EY +G Sbjct: 562 VLHWEHGRPGGLDNDQVRYNLADLVGSNTMEIDAEGQLISQEEYYPYGGTALLAARSELE 621 Query: 262 QLQQLIRLPGQQYDEESGLYYNRHRYYDPLQGRYITQDPIGLKGGWNFYQYP-LNPVQYI 320 + IR G++ D +GLYY RYY P GR+++ DP G N Y+ NP+ Y Sbjct: 622 VGYKTIRYSGRERDS-TGLYYYGFRYYQPWAGRWLSPDPAWTADGLNLYRMVRNNPLTYR 680 Query: 321 DSMGLASKYGH 331 DS GL S Sbjct: 681 DSEGLNSTPNS 691 Score = 41.3 bits (95), Expect = 0.086, Method: Composition-based stats. Identities = 25/182 (13%), Positives = 49/182 (26%), Gaps = 46/182 (25%) Query: 14 LYRYDRHGRLT------------------EKTDLIPEGVIRTDDERTHRYHYDSQ-HRLV 54 YD GRL + + + + Y Y+++ RL Sbjct: 253 RLAYDVAGRLAGSWLTLKGGKEQPIVVSMQYSAAGQKLRETHGNGVVTTYTYEARTQRLT 312 Query: 55 HYT--RTQYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYG------ 106 T R + A+ L + RY +DP+G ++ R +E + + Y Sbjct: 313 GITAVRVKDAKVLQDLRYAFDPVGNVISVRNDAQEARFWHNQKVVPES-TYLYDSLYQLV 371 Query: 107 -WDGDRLTTIQNDR-----------------TRIQTIYQPGSFTPLIRVETATGELAKTQ 148 G + + T Y+ + L ++ + Sbjct: 372 QAQGREMASAGQQGPQLPPVIVPIPVDNSAYTNYTRTYRYDNAGNLTQIRHSPATGTGYT 431 Query: 149 RR 150 Sbjct: 432 TD 433 >UniRef50_UPI0001AF2680 RHS/YD repeat-containing protein n=1 Tax=Streptomyces roseosporus NRRL 11379 RepID=UPI0001AF2680 Length = 1592 Score = 190 bits (483), Expect = 9e-47, Method: Composition-based stats. Identities = 73/343 (21%), Positives = 106/343 (30%), Gaps = 39/343 (11%) Query: 10 DAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESR 69 Y Y G LT TD + T + D+ R+ R Sbjct: 1129 VNSRSYTYRPDGHLTALTDGLSG---------TRTFDLDAVGRVTTVHAR-----GWTER 1174 Query: 70 YLYDPLGRRVAK--------------RVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTI 115 Y+YD G + + + + T Y +D T+ Sbjct: 1175 YVYDADGNQAEAAWPAGHPGGGGAGHPGGDGAGPRSYAGTKLVRAGGTHYEYDALGRVTL 1234 Query: 116 QNDRTRI----QTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSG-GEDGGSVVFP 170 + Y + L V T G + + L + DG SVV Sbjct: 1235 RRKTRLSRKPDTWQYAWDAENRLSSVTTPDGTRWRYRYDPLGRRTAKQRLSSDGESVVEE 1294 Query: 171 PVLVQMLDRLESEI--LADRVSEESRRWLASCGLTVEQMQNQMDPVYTP---ARKIHLYH 225 L + + W G+ + Q + + R+ Sbjct: 1295 VRFAWDGLTLCEQTAREPGLPNTVVLTWDHRAGVPLAQTERIITADTRQEEVDRRFFAIA 1354 Query: 226 CDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEESGLYYNRH 285 D G P LV G W + WG +R PGQ D E+GL+YN Sbjct: 1355 TDLVGAPTELVDPSGDIAWRSRTTLWGATAWPRTSTAY-TPLRFPGQYDDPETGLHYNFF 1413 Query: 286 RYYDPLQGRYITQDPIGLKGGWNFYQYPLNPVQYIDSMGLASK 328 R+YDP RY++ DP+GL G N Y NP + D +GL K Sbjct: 1414 RHYDPDAARYVSPDPLGLAAGPNPVAYVDNPFTWCDPLGLMPK 1456 Score = 78.7 bits (192), Expect = 4e-13, Method: Composition-based stats. Identities = 40/249 (16%), Positives = 71/249 (28%), Gaps = 30/249 (12%) Query: 2 WPDNRIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQY 61 + ++ R Y YD GR+T + T +Y +D+++RL T Sbjct: 1211 YAGTKLVRAGGTHYEYDALGRVTLRRKTRLSRKPD-----TWQYAWDAENRLSSVTTPDG 1265 Query: 62 AEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRL--TTIQNDR 119 RY YDPLGRR AK+ + + + + WDG L T + Sbjct: 1266 ----TRWRYRYDPLGRRTAKQRLSSDGESVV--------EEVRFAWDGLTLCEQTAREPG 1313 Query: 120 TRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDR 179 + + +T A T++ + + G+ + Sbjct: 1314 LPNTVVLTWDHRAGVPLAQTERIITADTRQEEVDRRFFAIATDLVGAPTELVDPSGDIAW 1373 Query: 180 LESEILADRVSEESRRWLASCGLTVEQMQNQMDPV------YTPARKIHLYHCDHRG--- 230 L + + Q + + + D G Sbjct: 1374 RSRTTLWGATAWPRTSTAYTPLRFPGQYDDPETGLHYNFFRHYDPDAARYVSPDPLGLAA 1433 Query: 231 --LPLALVS 237 P+A V Sbjct: 1434 GPNPVAYVD 1442 Score = 74.1 bits (180), Expect = 1e-11, Method: Composition-based stats. Identities = 60/443 (13%), Positives = 106/443 (23%), Gaps = 59/443 (13%) Query: 13 YLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYLY 72 + YD R T + + Y YD R+V + + Y Sbjct: 622 LTFAYDEAHRTT---------AWIDSNGSRYTYAYDEHDRVVSA-GGEAGHVALTLAYS- 670 Query: 73 DPL----GRRVAKRVWRRERDLTGWM-------SLSRKPQVTWYGWDGDRLTTIQNDRTR 121 DP R + T + +D + D Sbjct: 671 DPAPGTGHRVTTLTTADGHTTRHLIDAGCRVLSTTDPLGHTTRFTYDRHGRLLTRTDPLG 730 Query: 122 IQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLE 181 T + V G T R + ++ G DG + L L Sbjct: 731 RTTSFTYDEQGHPHTVTQPDGSRLTTTRDASERR-TETRGPDGARRLQEFDERGNLTALT 789 Query: 182 SEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGA 241 + + RWL + + + V T CD G+P+ + GA Sbjct: 790 ------DAAGHTTRWLVDPYGRTTSVTDALGAVTTVR-------CDAAGMPMEVTDPAGA 836 Query: 242 TEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEESGLYYNRHRYYDPLQGRYITQDPI 301 T D +G + + + ++D + L P Sbjct: 837 TTVVRR-DVFGRPAHITDAAGGTTRL-----EWDADGRLARRVA--------------PG 876 Query: 302 GLKGGWNFYQYPLNPVQYIDSMGLASKYGHLNNGGYGARPNKPPTPDPSKLPDIAKQLRL 361 G+ W Y N + Y D G S + + + AR + + + + Sbjct: 877 GVTESW-TYDGEGNCLTYTDPAGGVSSFEYTHFDLPAARTHPDGARYTFRYDAHLQLTHV 935 Query: 362 PYPIDQASSA-PNVFKTFFRALSPYDYTLYCRKWVKPNLTCTPQDDSQYPGMDTKTASDY 420 P + + T+ L+ Q Sbjct: 936 VNPRGMTWTYVYDAAGRTVAETDFDGRTVSYGYDAAGQLSTRTDALGQTISFKRDQLGRV 995 Query: 421 LPQTNWPTTQLPPGYTCAEPYLF 443 + + + Y A L Sbjct: 996 I-EKDADGRVTTYAYDQAGRLLH 1017 Score = 72.1 bits (175), Expect = 4e-11, Method: Composition-based stats. Identities = 44/283 (15%), Positives = 67/283 (23%), Gaps = 46/283 (16%) Query: 9 RDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVES 68 A Y +RYD H +LT + T Y YD+ R V T Sbjct: 918 DGARYTFRYDAHLQLTHVVN---------PRGMTWTYVYDAAGRTVAETDFDG----RTV 964 Query: 69 RYLYDPLGRRVAKRVWRRERDLTGWMSLSR------KPQVTWYGWD-GDRLTTIQNDRTR 121 Y YD G+ + + L R +VT Y +D RL + Sbjct: 965 SYGYDAAGQLSTRTDALGQTISFKRDQLGRVIEKDADGRVTTYAYDQAGRLLHATGPDSE 1024 Query: 122 IQTIYQ------------------PGSFTPLIRVETATGELAKTQRRSLADTLQQSGGED 163 + Y + R T TG++ S + G+ Sbjct: 1025 LLYQYDRRGQVKAELVDGYAMTYAYDALGRRTRRTTPTGQVTTYAYDSGGRPEHLTAGDH 1084 Query: 164 GGSVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHL 223 + + + + R + N Y P + Sbjct: 1085 RIGFAHDVAGRETSRVFGDTLTLTSTWDAAGRLATENLTVGGRAVNSRSYTYRPDGHLTA 1144 Query: 224 YHCDHRGLPLALVSTEGAT--------EWCAEYDEWGNLLNEE 258 G + G YD GN Sbjct: 1145 LTDGLSGTRTFDLDAVGRVTTVHARGWTERYVYDADGNQAEAA 1187 Score = 69.8 bits (169), Expect = 2e-10, Method: Composition-based stats. Identities = 48/281 (17%), Positives = 70/281 (24%), Gaps = 43/281 (15%) Query: 12 HYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQH-----------RLV-----H 55 + YDRHGRL +TD + RT + YD Q RL Sbjct: 711 TTRFTYDRHGRLLTRTDPL---------GRTTSFTYDEQGHPHTVTQPDGSRLTTTRDAS 761 Query: 56 YTRTQYAEPLVESRYL-YDPLGRRVAKRVWRRERDLTGWMSLSRKPQ-------VTWYGW 107 RT+ P R +D G A R VT Sbjct: 762 ERRTETRGPDGARRLQEFDERGNLTALTDAAGHTTRWLVDPYGRTTSVTDALGAVTTVRC 821 Query: 108 DGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSV 167 D + D T+ + F + A G + + + L + G + Sbjct: 822 DAAGMPMEVTDPAGATTVVRRDVFGRPAHITDAAGGTTRLEWDADG-RLARRVAPGGVTE 880 Query: 168 VFPPVLVQM--------LDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPAR 219 + E + + Q+ V P Sbjct: 881 SWTYDGEGNCLTYTDPAGGVSSFEYTHFDLPAARTHPDGARYTFRYDAHLQLTHVVNPRG 940 Query: 220 KIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENP 260 Y D G +A +G T YD G L + Sbjct: 941 MTWTYVYDAAGRTVAETDFDGRTV-SYGYDAAGQLSTRTDA 980 Score = 65.2 bits (157), Expect = 6e-09, Method: Composition-based stats. Identities = 38/273 (13%), Positives = 69/273 (25%), Gaps = 26/273 (9%) Query: 10 DAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESR 69 +D GRL + T + YD + T T A + Sbjct: 856 GGTTRLEWDADGRLARR---------VAPGGVTESWTYDGEGN--CLTYTDPAGGVSSFE 904 Query: 70 YL-YDPLGRRVAKRVWRRERDLTGWMSLSR----KPQVTWYGWDGDRLTTIQNDRTRIQT 124 Y +D R R + L+ + Y +D T + D Sbjct: 905 YTHFDLPAARTHPDGARYTFRYDAHLQLTHVVNPRGMTWTYVYDAAGRTVAETDFDGRTV 964 Query: 125 IYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQM---LDRLE 181 Y + L A G+ +R L +++ + + + E Sbjct: 965 SYGYDAAGQLSTRTDALGQTISFKRDQLGRVIEKDADGRVTTYAYDQAGRLLHATGPDSE 1024 Query: 182 SEILADRVSEESRRWLASCGLTVEQMQNQ-MDPVYTPARKIHLYHCDHRGLPLALVSTEG 240 DR + + +T TP ++ Y D G P L + + Sbjct: 1025 LLYQYDRRGQVKAELVDGYAMTYAYDALGRRTRRTTPTGQVTTYAYDSGGRPEHLTAGDH 1084 Query: 241 A------TEWCAEYDEWGNLLNEENPHQLQQLI 267 +G+ L + + Sbjct: 1085 RIGFAHDVAGRETSRVFGDTLTLTSTWDAAGRL 1117 Score = 62.1 bits (149), Expect = 4e-08, Method: Composition-based stats. Identities = 41/267 (15%), Positives = 64/267 (23%), Gaps = 21/267 (7%) Query: 6 RIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDD--ERTHRYHYDSQHRLVHYTRTQYAE 63 R A L +D G LT TD D RT D+ + Sbjct: 768 RGPDGARRLQEFDERGNLTALTDAAGHTTRWLVDPYGRTTSVT-DALGAVTTVRCDAAGM 826 Query: 64 PLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQ 123 P+ + DP G A V RR+ T WD D + + Sbjct: 827 PMEVT----DPAG---ATTVVRRDVFGRPAHITDAAGGTTRLEWDADGRLARRVAPGGVT 879 Query: 124 TIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLES- 182 + + G ++ + + D DG F L + + Sbjct: 880 ESWTYDGEGNCLTYTDPAGGVSSFEY-THFDLPAARTHPDGARYTFRYDAHLQLTHVVNP 938 Query: 183 -----EILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPA--RKIHLYHCDHRGLPLAL 235 + D + + D G + Sbjct: 939 RGMTWTYVYDAAGRTVAETDFDGRTVSYGYDAAGQLSTRTDALGQTISFKRDQLGRVIEK 998 Query: 236 VSTEGATEWCAEYDEWGNLLNEENPHQ 262 +G YD+ G LL+ P Sbjct: 999 -DADGRVT-TYAYDQAGRLLHATGPDS 1023 >UniRef50_C1B7W9 Putative uncharacterized protein n=1 Tax=Rhodococcus opacus B4 RepID=C1B7W9_RHOOB Length = 514 Score = 190 bits (482), Expect = 9e-47, Method: Composition-based stats. Identities = 85/364 (23%), Positives = 122/364 (33%), Gaps = 21/364 (5%) Query: 15 YRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYLYDP 74 Y Y G L D + D R+ + + +Y YDP Sbjct: 114 YAYRPDGYLV-----DHNIRRDAIDAVHRSFDLDPAGRITAVVQDGHP----TEQYSYDP 164 Query: 75 LGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGD--RLTTIQNDRTRIQTIYQPGSFT 132 LG RRE G + + Y G R TT + Y+ +F Sbjct: 165 LGNITDSGSDRRE--YLGNLLVRDGRTRFHYDAVGRLIRKTTTRPSHAPDVWHYRYNAFD 222 Query: 133 PLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSEE 192 L V T G +L + + G+V ++ D + +L + Sbjct: 223 QLTDVTTPDGPHWHYTYDALGRRTTKHRLDHDGAVAVAELIRYTWDG--THLLEQTAGDT 280 Query: 193 SRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVST-EGATEWCAEYDEW 251 + RW G Q + + + D G P+ LV + A D W Sbjct: 281 TTRWTYQHGSYTPLT--QAVDQGSVDAEFYAIVTDLVGTPVELVDPRTADSVADATTDLW 338 Query: 252 GNLLNEENPHQLQQLIRLPGQQYDEESGLYYNRHRYYDPLQGRYITQDPIGLKGGWNFYQ 311 G+ +R PGQ +D E+GL+YN HRYY+P RY+TQDP+GL N Sbjct: 339 GHTTWR---GATDTHLRFPGQYHDPETGLHYNLHRYYNPHTARYLTQDPLGLAPSPNPNT 395 Query: 312 YPLNPVQYIDSMGLASKYGHLNNGGYGARPNKPPTPDPSKLPDIAKQLRLPYPIDQASSA 371 YP NP + D +GL G G D K L+ P + Sbjct: 396 YPHNPTGWTDPLGLVPCPPTTIEGPNGESLPAVQPGAVGTPVDSGKGLQYPISPNTPGLD 455 Query: 372 PNVF 375 P V Sbjct: 456 PRVT 459 Score = 97.6 bits (241), Expect = 9e-19, Method: Composition-based stats. Identities = 43/235 (18%), Positives = 67/235 (28%), Gaps = 30/235 (12%) Query: 2 WPDNRIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQY 61 + N + RD + YD GRL KT P Y Y++ +L T Sbjct: 178 YLGNLLVRDGRTRFHYDAVGRLIRKTTTRPSHAPD-----VWHYRYNAFDQLTDVTTPDG 232 Query: 62 AEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTR 121 Y YD LGRR K ++ Y WDG L T Sbjct: 233 PH----WHYTYDALGRRTTKHR-------LDHDGAVAVAELIRYTWDGTHLLEQTAGDTT 281 Query: 122 IQTIYQPGSFTPLIRVETATGELAKTQRR--------------SLADTLQQSGGEDGGSV 167 + YQ GS+TPL + A+ AD++ + + G Sbjct: 282 TRWTYQHGSYTPLTQAVDQGSVDAEFYAIVTDLVGTPVELVDPRTADSVADATTDLWGHT 341 Query: 168 VFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIH 222 + L + + + Q+ + +P + Sbjct: 342 TWRGATDTHLRFPGQYHDPETGLHYNLHRYYNPHTARYLTQDPLGLAPSPNPNTY 396 >UniRef50_A4J380 YD repeat protein n=3 Tax=Bacteria RepID=A4J380_DESRM Length = 2558 Score = 190 bits (482), Expect = 1e-46, Method: Composition-based stats. Identities = 73/410 (17%), Positives = 114/410 (27%), Gaps = 64/410 (15%) Query: 10 DAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERT--HRYHYDSQHRLVHYTRTQYAEP--- 64 Y YD G +T D V + Y Y+ ++LV T Q+ Sbjct: 1870 LQKIHYTYDPVGNVTRLRDNSYPTVFYNQQKVEPLSDYSYNPLYQLVSATGRQHPGIFDG 1929 Query: 65 --------------------------LVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSR 98 Y YD G R T + +S+ Sbjct: 1930 SHRDGFKQSKFIPIKSSNPNDGTSLENYRQDYQYDEAGNLTNIRHISSSTSWTRQLDISK 1989 Query: 99 KPQVT---------------WYGWDGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGE 143 T Y G+ L ++R E + + Sbjct: 1990 GTNRTVQIASLNGAKNFFKTAYDPCGNMLNLENLASINWSYRNNLSRVDVILR-ENNSSD 2048 Query: 144 LAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLT 203 S +++ GS+ + + + I ES+ Sbjct: 2049 SEYFIYDSSGQRVRKVSERKCGSLREIEEKLYLGNFEIKRIKKKSDHLESQILDRQSLHI 2108 Query: 204 VEQMQN------------QMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEW 251 ++ + T RK ++ G V + C EY + Sbjct: 2109 MDGKSRIAITDIWLKDDLNRETEKTMERKFRYQLNNNLGSACLEVDEKVNIISCEEYFPY 2168 Query: 252 GNLLNEENPHQLQ---QLIRLPGQQYDEESGLYYNRHRYYDPLQGRYITQDPIGLKGGWN 308 G + + + R G++ D+ +G YY RYY P GR+I DP G G N Sbjct: 2169 GGTSFIAGRDKREVKLKEYRYCGKERDDSTGFYYYGARYYLPWLGRWINPDPAGTVDGLN 2228 Query: 309 FYQYP-LNPVQYIDSMGLA-SKYGHLNNGGYGARPNKPPTPDPSKLPDIA 356 Y + NPV +ID+ G + HL GG A D A Sbjct: 2229 LYSFVKGNPVNFIDTSGKVGGSWLHLLYGGLTALAVGLIGGAAVGTGDYA 2278 >UniRef50_D0BWK2 YD repeat protein n=1 Tax=Acinetobacter sp. RUH2624 RepID=D0BWK2_9GAMM Length = 1361 Score = 190 bits (481), Expect = 1e-46, Method: Composition-based stats. Identities = 74/388 (19%), Positives = 128/388 (32%), Gaps = 43/388 (11%) Query: 12 HYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYL 71 Y +DR R+ + ++ + YD + RL+ +R+ A + Y Sbjct: 844 SLNYSFDRDNRIISI---------KRNNNLNDNFSYDQEGRLLTESRSNDASSIYAITYT 894 Query: 72 YDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQPGSF 131 YD G R++ R + Y + G++LTT+ + T Y + Sbjct: 895 YDKNGNRLSLRASGTHLQPAANVD---------YAYTGNKLTTLTKNGTAQPLNYTANAE 945 Query: 132 TPLIRV--------ETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESE 183 + + + T R ++ G + + VQ + +S Sbjct: 946 LYMGEILPSYDYAGRRRGEGTSTTINRYMSYNANNERTLSGSTSAWSNTAVQFIYDEKSH 1005 Query: 184 ILADRVSEE--SRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGA 241 ++ + + ++ V + KI+ D + P L+ + G+ Sbjct: 1006 LIGEYTATGIPLVEYIWLGDKPVAAVYESGA-----TTKIYYIVTDVQNTPRRLIDSNGS 1060 Query: 242 TEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEESGLYYNRHRYYDPLQGRYITQDPI 301 W + +G + +R PGQ YD +G +YN +R+Y+P GRY+ DPI Sbjct: 1061 VVWSWDSTAFG---LGSPVSTITFNLRFPGQYYDATTGQFYNHNRFYNPELGRYMEPDPI 1117 Query: 302 GLKGGWNFYQYP-LNPVQYIDSMGLASK------YGHLNNGGYGARPNKPPTPDPSKLPD 354 GL GG N Y Y NPV Y+D G Y D K Sbjct: 1118 GLAGGLNPYIYALNNPVMYVDMTGENPILIAMGVSAATAGAFYTGEVFFNAVYDAYKNDQ 1177 Query: 355 IAKQLRLPYPIDQASSAPNVFKTFFRAL 382 + V F + Sbjct: 1178 SILDSFSKSFSIKELGQQMVIGAAFGGV 1205 Score = 54.0 bits (128), Expect = 1e-05, Method: Composition-based stats. Identities = 33/268 (12%), Positives = 68/268 (25%), Gaps = 28/268 (10%) Query: 6 RIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRY-HYDSQHRLVHYTRTQYAEP 64 R Y YD +G L + I ERT +Y Y+S Sbjct: 382 RSGTLDKISYTYDNYGNLASVSTTINGT------ERTEQYVGYNSFGDPERIVYPNG--- 432 Query: 65 LVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQT 124 + +Y Y+ G + T + + +D + +T Sbjct: 433 -MVEKYTYNDDGTISSVVTGSGSTAGTI------TGKTVTFSYDSLGQLVGSLNEDGEKT 485 Query: 125 IYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFP--PVLVQMLDRLES 182 Y + +I+ + G ++ + + VF + + R+ Sbjct: 486 SYYYDNLGRIIKTIYSDGSISTKNYFNNNIISSDEVKDSSAITVFKGLYRTLDLSGRINK 545 Query: 183 EILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGAT 242 + + + V Q + + + D P++ + G Sbjct: 546 IQIGTDSTSNWKTLGYDGNGNVIQTKTAQGIIESWT-------YDALNRPISHIDGSGN- 597 Query: 243 EWCAEYDEWGNLLNEENP-HQLQQLIRL 269 YD N + + Sbjct: 598 TDTKTYDALDNPITVLDALSSGTNPYLY 625 Score = 51.3 bits (121), Expect = 9e-05, Method: Composition-based stats. Identities = 35/254 (13%), Positives = 67/254 (26%), Gaps = 33/254 (12%) Query: 21 GRLTEKTDLIPEGVIRTDDERTHRYHY--D---SQHRLVHYTRTQYAEPLVESRYLYDPL 75 G++ ++T+ + Y+Y D + L+ + L + Y YD Sbjct: 340 GQIVKQTE---SSTQVQSTSKVTTYNYFTDITKPNNGLLSSKDGPRSGTLDKISYTYDNY 396 Query: 76 GRRVAKRVWRRERDLTGWM-------------SLSRKPQVTWYGWDGDRLTTIQNDRTRI 122 G + + T + + Y DG + + + Sbjct: 397 GNLASVSTTINGTERTEQYVGYNSFGDPERIVYPNGMVEKYTYNDDGTISSVVTGSGSTA 456 Query: 123 ------QTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQM 176 + S L+ GE +L ++ + S + Sbjct: 457 GTITGKTVTFSYDSLGQLVGSLNEDGEKTSYYYDNLGRIIKTIYSDGSISTKNYFNNNII 516 Query: 177 LDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALV 236 + A V + R L G + Q+ T K Y D G + Sbjct: 517 SSDEVKDSSAITVFKGLYRTLDLSGRI---NKIQIGTDSTSNWKTLGY--DGNGNVIQTK 571 Query: 237 STEGATEWCAEYDE 250 + +G YD Sbjct: 572 TAQG-IIESWTYDA 584 Score = 42.9 bits (99), Expect = 0.031, Method: Composition-based stats. Identities = 25/248 (10%), Positives = 64/248 (25%), Gaps = 23/248 (9%) Query: 23 LTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYLYDPLGRRVAKR 82 + I I + Y +D+ +R++ + Y+Y L + Sbjct: 259 IVYAPSEIHPTQITDQNGNITAYAFDTLNRILQVVEASGTTISRTTNYVYGVLSNGLENL 318 Query: 83 VWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATG 142 T +++ + ++ T++Q+ + ++ + Sbjct: 319 FNIPTTIKTSNFTITNEINEKG------QIVKQTESSTQVQSTSKVTTYNYFTDITKPNN 372 Query: 143 --------------ELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADR 188 + + + S +G V E + + Sbjct: 373 GLLSSKDGPRSGTLDKISYTYDNYGNLASVSTTINGTERTEQYVGYNSFGDPERIVYPNG 432 Query: 189 VSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWCAEY 248 + E+ G + T K + D G + ++ +G Y Sbjct: 433 MVEKYT--YNDDGTISSVVTGSGSTAGTITGKTVTFSYDSLGQLVGSLNEDGEKTSYY-Y 489 Query: 249 DEWGNLLN 256 D G ++ Sbjct: 490 DNLGRIIK 497 >UniRef50_C7Q0B8 YD repeat protein n=1 Tax=Catenulispora acidiphila DSM 44928 RepID=C7Q0B8_CATAD Length = 1489 Score = 190 bits (481), Expect = 1e-46, Method: Composition-based stats. Identities = 87/413 (21%), Positives = 127/413 (30%), Gaps = 45/413 (10%) Query: 16 RYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEP----------- 64 +D GRL T + Y L + Sbjct: 1039 GFDAAGRL-----AAQRVTFGTSALVARDFAYSPTDLLSEIRDVRTGTRRFELTKAGRVA 1093 Query: 65 -----LVESRYLYDPLGRRVAKRVWRRERD-LTGWMSLSRKPQVTWYGWDGDRLTTIQN- 117 Y YD LG + E +L T Y D + Sbjct: 1094 GVQAEGWHESYAYDALGNLASTNSQNSESVVYVHDGTLISSAGRTVYRHDAMGRVVSKTR 1153 Query: 118 ---DRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLV 174 Y+ + L+ T + Q L + + GSV Sbjct: 1154 RLLSGGTKTWDYRWDARNRLVAARTPENVVWTYQYDPLGRRVGKVRLNGDGSVAEQIRFT 1213 Query: 175 QMLDRLESEILADRV--------------SEESRRWLASCGLTVEQMQNQMDPVYTPARK 220 RL + AD ++ + A + + PV Sbjct: 1214 WDKTRLAAVTAADGTVTTWDYLPDTFTPIAQHTHTPAAGSVDPDVAVTYDVAPVSASEPD 1273 Query: 221 IHLYHCDHRGLPLALVSTEGATEWC-AEYDEWGNLLNEENPHQLQQLIRLPGQQYDEESG 279 L D G P LVS +G W WG + P + +R PGQ +D E+G Sbjct: 1274 FALVVTDPVGTPTELVSADGHVVWQQRRASIWGLPADIVPPDADEFPLRFPGQYHDSETG 1333 Query: 280 LYYNRHRYYDPLQGRYITQDPIGLKGGWNFYQYPLNPVQYIDSMGLASKYGHLNNGGYGA 339 L+YN +RYYDP Y+T DP+GL+ N Y Y NP+ D +GL G+ GG G+ Sbjct: 1334 LHYNLNRYYDPEAAAYLTPDPLGLEPAPNQYGYVGNPLADSDPLGLYPASGNAR-GGNGS 1392 Query: 340 RPNKPPTPDPSKLPDIAKQLRLPYPIDQASSAPNVFKTFFRALSPYDYTLYCR 392 N P S+ D+AK L + ++ ++ Y Y R Sbjct: 1393 NENVMP---KSQADDVAKYLGYKKTKEMSAGKQPIWVNKKAGGGQPKYITYDR 1442 Score = 75.6 bits (184), Expect = 4e-12, Method: Composition-based stats. Identities = 44/314 (14%), Positives = 80/314 (25%), Gaps = 52/314 (16%) Query: 5 NRIARDAH-----YLYRYDRHGRLTE-------------KTDLIPEGVIRTDDERTHRYH 46 NRI Y Y YD GR+ D ++ D RY Sbjct: 564 NRITGWQDRLGMDYHYTYDERGRVVHGQGNHGFLTASFDYHDEERFTLVTDSDGNVTRYG 623 Query: 47 YDSQHRLVHYTRTQYA-----------------EPLVESRYLYDPLGRRVAKRVWRRERD 89 YD + R+V T E + + D LG+ + + Sbjct: 624 YDERGRIVAVTDPAGNVELRELDRYGNQLSVVDEMGRATTFERDGLGQVLRSVMADGAET 683 Query: 90 LTGWMSLSRKPQ-------VTWYGWDGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATG 142 T W + Q V Y +D + D T Y+ + L R+ G Sbjct: 684 TTTWAAPGLPEQITDAIGAVWQYSYDAMGRLATETDPLGAVTSYEYTANGYLSRMTDPAG 743 Query: 143 ELAKTQRRSLADTLQQSGGEDGGSVVFPPV-----LVQMLDRLESEILADRVSEESRRWL 197 + ++ ++ + + + +E D R + Sbjct: 744 HAITVECDAVGLPVRVMDPDGSVTTTTRDAAGRISTLTDGSGRVTEQHYDSRGNLLTRIM 803 Query: 198 ASCGLTV--EQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLL 255 +++ + P + + + +GA + YD G + Sbjct: 804 PDGATWTFSYDLESNLSGEQAPDGSVRTWQYTFLNTLVGRTEADGA-AYRFAYD--GQMR 860 Query: 256 NEENPHQLQQLIRL 269 R Sbjct: 861 LTTVTGPTGAAWRY 874 Score = 63.3 bits (152), Expect = 2e-08, Method: Composition-based stats. Identities = 36/260 (13%), Positives = 60/260 (23%), Gaps = 38/260 (14%) Query: 18 DRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYLYDPLGR 77 D GR++ TD R HYDS+ L+ A + YD Sbjct: 772 DAAGRISTLTD---------GSGRVTEQHYDSRGNLLTRIMPDGA----TWTFSYDLESN 818 Query: 78 RVAKRVWRRERDLTGWMSLSRKPQVT-------WYGWDGDRLTTIQNDRTRIQTIYQPGS 130 ++ + L+ T + +DG T T Y+ Sbjct: 819 LSGEQAPDGSVRTWQYTFLNTLVGRTEADGAAYRFAYDGQMRLTTVTGPTGAAWRYEYNP 878 Query: 131 FTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVS 190 L+ G +R ++ S Q L +LA Sbjct: 879 VGHLVAETDFNGRRIDYERDAVGQMTVLSQA--------EGRRQQFLHDPVGRVLAMDAD 930 Query: 191 EESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDE 250 + R+ + + D G + +G YD Sbjct: 931 GDVTRYSFDAAGRMIAATAPGTELSRT--------YDAVGRLVTET-VDGHAV-SYRYDA 980 Query: 251 WGNLLNEENPHQLQQLIRLP 270 G + Sbjct: 981 AGRAAGLRLSQGHEASWEFS 1000 Score = 62.1 bits (149), Expect = 5e-08, Method: Composition-based stats. Identities = 67/461 (14%), Positives = 111/461 (24%), Gaps = 77/461 (16%) Query: 18 DRHGRLTEKTDLIPEGVIRTDDERTHRYHYD----SQHRLVHYTR--TQYAEPLVESRYL 71 DR G E + +R D + + + R AE + + Sbjct: 479 DRSGNRVEYIRDALGTPVEVRHSGGYRVAVDLRETASGQRISALRLVGDDAESALLIGFG 538 Query: 72 YDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQPGSF 131 YD GR + + Y WD T DR + Y Sbjct: 539 YDERGRL--------------SRVMDPEGNSLQYSWDEQNRITGWQDRLGMDYHYTYDER 584 Query: 132 TPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSE 191 ++ + G L + + DG + + ++ + Sbjct: 585 GRVVHGQGNHGFLTASFDYHDEERFTLVTDSDGNVTRYGYDERGRI-VAVTDPAGNVELR 643 Query: 192 ESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHR---------GLPLALVSTEGAT 242 E R+ + E + + + D GLP + GA Sbjct: 644 ELDRYGNQLSVVDEMGRATTFERDGLGQVLRSVMADGAETTTTWAAPGLPEQITDAIGA- 702 Query: 243 EWCAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEESGLYYNRHRYYDPLQGRYITQ--DP 300 W YD G L E +P +G R DP G IT D Sbjct: 703 VWQYSYDAMGRLATETDPLGAVTSYEYT------ANG---YLSRMTDPA-GHAITVECDA 752 Query: 301 IGLKGGWNFYQYPLNPVQYIDSMG---------------LASKYGHLNNGGYGARPN--- 342 +GL PV+ +D G L G + Y +R N Sbjct: 753 VGL------------PVRVMDPDGSVTTTTRDAAGRISTLTDGSGRVTEQHYDSRGNLLT 800 Query: 343 --KPPTPDPSKLPDIAKQLRLPYPIDQASSAPNVF--KTFFRALSPYDYTLYCRKWVKPN 398 P + D+ L D + T + Sbjct: 801 RIMPDGATWTFSYDLESNLSGEQAPDGSVRTWQYTFLNTLVGRTEADGAAYRFAYDGQMR 860 Query: 399 LTCTPQDDSQYPGMDTKTASDYLPQTNWPTTQLPPGYTCAE 439 LT + + +T++ ++ Sbjct: 861 LTTVTGPTGAAWRYEYNPVGHLVAETDFNGRRIDYERDAVG 901 Score = 54.8 bits (130), Expect = 7e-06, Method: Composition-based stats. Identities = 41/281 (14%), Positives = 69/281 (24%), Gaps = 57/281 (20%) Query: 10 DAHYLYRYDRHGRLTEKTDLIPE------------GVIRTDDERTHRYHYDSQHRLVHYT 57 A + Y Y+ G L +TD V+ + R ++ +D R++ Sbjct: 869 GAAWRYEYNPVGHLVAETDFNGRRIDYERDAVGQMTVLSQAEGRRQQFLHDPVGRVLA-- 926 Query: 58 RTQYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQN 117 +RY +D GR +A E T Y G RL T Sbjct: 927 ---MDADGDVTRYSFDAAGRMIAATAPGTELSRT-------------YDAVG-RLVTETV 969 Query: 118 DRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQML 177 D + Y +R+ + L G + F Sbjct: 970 DGHAVSYRYDAAGRAAGLRLSQGHEASWEFSPGGALTRLS----SSGHEIAFTTDAAGRA 1025 Query: 178 DRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHR-------- 229 ++ + S + + AR D Sbjct: 1026 TGWVADR------KLSMTRGFDAAGRLAAQRVTFGTSALVARDFAYSPTDLLSEIRDVRT 1079 Query: 230 GLPLALVSTEGATE--------WCAEYDEWGNLLNEENPHQ 262 G ++ G YD GNL + + + Sbjct: 1080 GTRRFELTKAGRVAGVQAEGWHESYAYDALGNLASTNSQNS 1120 >UniRef50_Q73C66 Wall associated protein, putative n=73 Tax=Bacillus cereus group RepID=Q73C66_BACC1 Length = 2246 Score = 189 bits (480), Expect = 2e-46, Method: Composition-based stats. Identities = 68/384 (17%), Positives = 116/384 (30%), Gaps = 44/384 (11%) Query: 14 LYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYLYD 73 Y YD+ G T+ G + + YD ++L++ Y YD Sbjct: 1789 RYEYDQAGNRTKIKHEGAGGKV-----TETNFVYDPINQLLNEALPNG----TTKSYTYD 1839 Query: 74 PLGRRVA--------KRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTI 125 G R + + G + + Y +G+R+ + + Sbjct: 1840 GFGNRTSVKVVENGKETKSIAATFNEGNQLVKFGNESLTYDANGNRI-------SDGKYK 1892 Query: 126 YQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEIL 185 Y L+ + + D + +G + D + Sbjct: 1893 YTWNEDDQLVSITKQGATTPFATYKYDEDNRRIEKSVNGQVTRY----FYDGDSINPLYE 1948 Query: 186 ADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWC 245 D R+++ S T M+ + YH + RG +A+ + + Sbjct: 1949 TDGSGNVLRQYVYSTSGTRLAMK--------SKGQTLYYHYNPRGDVVAMTNQDKEVVAT 2000 Query: 246 AEYDEWGNLL-NEENPHQLQQLIRLPGQQYDEESGLYYNRHRYYDPLQGRYITQDPIGLK 304 EYD WGN+L ++ G YD+E G+YY RYY+P G +++ DP Sbjct: 2001 YEYDSWGNVLKSDTKGIAADNPFGYAGYMYDKEIGMYYLVARYYNPDHGVFLSVDPDPGD 2060 Query: 305 G----GWNFYQYP-LNPVQYIDSMGLASKYGHLNNGGYGARPNKPPTPDPSKLPDIAKQL 359 N Y Y NPV D G A N G+ + I ++ Sbjct: 2061 EDDPITMNGYTYGDNNPVMMTDPDGHAPW--LAINAGFAVYDGYKAYKSGASKKVILRKA 2118 Query: 360 RLPYPIDQASSAPNVFKTFFRALS 383 L + S Sbjct: 2119 ALGFVGGGKLKYAGKITKAIGGGS 2142 Score = 67.1 bits (162), Expect = 1e-09, Method: Composition-based stats. Identities = 31/271 (11%), Positives = 63/271 (23%), Gaps = 30/271 (11%) Query: 9 RDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVES 68 + YD G +TD + Y Y+ + L T Sbjct: 1517 EGQKNTFTYDASGNKKSETDEKGNTKL---------YDYNKDNLLTKVTLKNGTS----V 1563 Query: 69 RYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWY----------GWDGDRLTTIQND 118 Y YD G K V + T + T Y +D + Sbjct: 1564 NYRYDHNGNTTEKSVMFGGKTQTHKYEYDVDNKNTVYIDALNRRIENTYDENANKIKTKM 1623 Query: 119 RTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLD 178 + +I + + +R + +G Sbjct: 1624 PNGSILESVYDTADRVIGEKRNGKDSFTFERDQNGQVTKVKDHVNGVERTKTYDKADR-- 1681 Query: 179 RLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVST 238 + R + + E+++ Q K+ + + + Sbjct: 1682 --VTSATDSRGGKVDWAYHDKANSKTEKLKEQTVTQGGYTNKVSY-DYNTLDQNIRVTD- 1737 Query: 239 EGATEWCAEYDEWGNLLNEENPHQLQQLIRL 269 G+ + +YD+ GN+ + Sbjct: 1738 -GSQTYRFDYDDQGNVRTYTAGNGSGSTFNY 1767 Score = 66.4 bits (160), Expect = 2e-09, Method: Composition-based stats. Identities = 34/251 (13%), Positives = 69/251 (27%), Gaps = 37/251 (14%) Query: 4 DNRIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAE 63 N++ + + YD +G + ++Y ++ +LV T+ Sbjct: 1866 GNQLVKFGNESLTYDANGNRIS--------------DGKYKYTWNEDDQLVSITKQGATT 1911 Query: 64 PLVESRYLYDPLGRRVAKRVWRRERDLTG----------WMSLSRKPQVTWYGWDGDRLT 113 P Y YD RR+ K V + + Y G RL Sbjct: 1912 PFAT--YKYDEDNRRIEKSVNGQVTRYFYDGDSINPLYETDGSGNVLRQYVYSTSGTRLA 1969 Query: 114 TIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVL 173 +T Y ++ + E+ T + +S + + Sbjct: 1970 MKSKGQTL---YYHYNPRGDVVAMTNQDKEVVATYEYDSWGNVLKSDTKGIAADNPFGYA 2026 Query: 174 VQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPL 233 M D+ +R + G+ + + D + Y + P+ Sbjct: 2027 GYMYDKEIGMYYL-----VARYYNPDHGVFLSVDPDPGDEDDPITMNGYTYGDN---NPV 2078 Query: 234 ALVSTEGATEW 244 + +G W Sbjct: 2079 MMTDPDGHAPW 2089 Score = 61.4 bits (147), Expect = 8e-08, Method: Composition-based stats. Identities = 31/257 (12%), Positives = 75/257 (29%), Gaps = 34/257 (13%) Query: 12 HYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYL 71 + + D++G++T+ D + + YD R+ T ++ + Sbjct: 1649 SFTFERDQNGQVTKVKDHV--------NGVERTKTYDKADRVTSATDSRGGKVDWAYH-- 1698 Query: 72 YDPLGRRVAKRVWRR-------------ERDLTGWMSLSRKPQVTWYGWD--GDRLTTIQ 116 D + K + L + ++ Q + +D G+ T Sbjct: 1699 -DKANSKTEKLKEQTVTQGGYTNKVSYDYNTLDQNIRVTDGSQTYRFDYDDQGNVRTYTA 1757 Query: 117 NDRTRIQTIYQPGSFTPLIRVETATGE--LAKTQRRSLADTLQQSGGEDGGSVVFPPVLV 174 + + Y + + V TA + + + + GG V + Sbjct: 1758 GNGSGSTFNYDHANKIKDLVVGTANSILLSERYEYDQAGNRTKIKHEGAGGKVTETNFVY 1817 Query: 175 QMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHR---GL 231 +++L +E L + ++ S + T ++ + A + + G Sbjct: 1818 DPINQLLNEALPNGTTK-SYTYDGFGNRTSVKVVENGKETKSIAATFN--EGNQLVKFGN 1874 Query: 232 PLALVSTEGATEWCAEY 248 G +Y Sbjct: 1875 ESLTYDANGNRISDGKY 1891 Score = 57.9 bits (138), Expect = 8e-07, Method: Composition-based stats. Identities = 37/293 (12%), Positives = 78/293 (26%), Gaps = 38/293 (12%) Query: 10 DAHYLYRYDRHGRLTEKTDLIPEGVIRT-------------DDERTHRYHYDSQHRLVHY 56 Y YD RL++ + + ++ D +T ++YD LV Sbjct: 903 GNTTTYEYDGESRLSKVKNASGKELVVQYDGNNKKAVRVIGPDNKTLTFNYDG-DFLVSS 961 Query: 57 TRTQYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQ 116 T + +Y YD + KP T Y ++ +RL + Sbjct: 962 TTPEG----KVYKYGYDN----------GLLTSIYDPQHTDAKPYKTSYAYENNRLVKVT 1007 Query: 117 NDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVL--- 173 + + T+ + T + + G + ++ ++ Sbjct: 1008 DPLGKATTL-AYNTDTKEVTLTNPKGRKTVYTYNDAGNPVKTVEDVGRLNLTTSYEYNAN 1066 Query: 174 ----VQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPA-RKIHLYHCDH 228 D + E ++ T + Sbjct: 1067 NLVKTTTPKNQTETATYDGNGNVTSVTDEMGTEKFEYNKDNGLIKATDNENRETTVAYKA 1126 Query: 229 RGLPLALVSTEGATEWCAEYDEWGNLLNEENP-HQLQQLIRLPGQQYDEESGL 280 ++ T +YD++GN + + LI+ P + D +G Sbjct: 1127 ANTEVSETDQAANTSSFMQYDQFGNPIETTRELGTGENLIQNPSFEMDITNGW 1179 Score = 52.5 bits (124), Expect = 3e-05, Method: Composition-based stats. Identities = 33/234 (14%), Positives = 73/234 (31%), Gaps = 30/234 (12%) Query: 7 IARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLV 66 + YRYD +G TEK+ V+ +TH+Y YD + Sbjct: 1557 LKNGTSVNYRYDHNGNTTEKS------VMFGGKTQTHKYEYDVDN--------------K 1596 Query: 67 ESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTIY 126 + Y+ D L RR+ + + + + Y DR+ + + + Sbjct: 1597 NTVYI-DALNRRIE-NTYDENANKIKTKMPNGSILESVYD-TADRVIGEKRNGKD-SFTF 1652 Query: 127 QPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILA 186 + + +V+ + +T+ AD + + GG V + + + Sbjct: 1653 ERDQNGQVTKVKDHVNGVERTKTYDKADRVTSATDSRGGKVDWAYHDKANSKTEKLKEQT 1712 Query: 187 DRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEG 240 + + + ++ T + + + D +G + G Sbjct: 1713 VTQGGYTNKVSYDYNTLDQNIRV------TDGSQTYRFDYDDQGNVRTYTAGNG 1760 Score = 47.9 bits (112), Expect = 0.001, Method: Composition-based stats. Identities = 24/189 (12%), Positives = 50/189 (26%), Gaps = 24/189 (12%) Query: 71 LYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQPGS 130 YD G VA + + Q + +D + D +Y Sbjct: 1503 EYDNDGNVVA--------------AYDEEGQKNTFTYDASGNKKSETDEKGNTKLYDYNK 1548 Query: 131 FTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVL----------VQMLDRL 180 L +V G + +T ++S G + + R+ Sbjct: 1549 DNLLTKVTLKNGTSVNYRYDHNGNTTEKSVMFGGKTQTHKYEYDVDNKNTVYIDALNRRI 1608 Query: 181 ESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEG 240 E+ + +++ S +V +++ + + D G + Sbjct: 1609 ENTYDENANKIKTKMPNGSILESVYDTADRVIGEKRNGKDSFTFERDQNGQVTKVKDHVN 1668 Query: 241 ATEWCAEYD 249 E YD Sbjct: 1669 GVERTKTYD 1677 >UniRef50_B5I7B2 Rhs repeat protein n=1 Tax=Streptomyces sviceus ATCC 29083 RepID=B5I7B2_9ACTO Length = 1249 Score = 189 bits (480), Expect = 2e-46, Method: Composition-based stats. Identities = 66/332 (19%), Positives = 108/332 (32%), Gaps = 38/332 (11%) Query: 9 RDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVES 68 R Y D R+T T + + +Y Y++ +H Sbjct: 803 RTGRRTYTLDAASRITAVT----------AEGWSEQYAYNTAGDQMHAALPPGTPGQ--- 849 Query: 69 RYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTT----IQNDRTRIQT 124 D G R S + T Y +D ++ Sbjct: 850 ----DTAGERT------------YSGSRVTQAGRTHYTYDVQGRLAQKRVTTLSGKQLTW 893 Query: 125 IYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEI 184 + + L +V+ + +L + G + +L + Sbjct: 894 TFTWDAEDRLTQVQAPGDVAWRYFYDALGRRTAKHRLRADGRIEDVTTYCWDGGQLAEQ- 952 Query: 185 LADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEW 244 + + W + + Q + + R+ D G P L++ +G W Sbjct: 953 ---HTNGVTLIWDYTGLHPLAQREAKTQEQGESDRRFFAIVTDLAGAPTDLIAPDGTIAW 1009 Query: 245 CAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEESGLYYNRHRYYDPLQGRYITQDPIGLK 304 + WG+ + + +R PGQ +D E+GL+YN +RYYDP GRY T DP+GL Sbjct: 1010 HSRSTAWGSTQSHRDATAY-TPLRYPGQYFDPETGLHYNLNRYYDPELGRYTTPDPLGLA 1068 Query: 305 GGWNFYQYPLNPVQYIDSMGLASKYGHLNNGG 336 N Y Y NP D +GLA GG Sbjct: 1069 PAVNHYTYVPNPFTLADPLGLAGCTADPTWGG 1100 Score = 86.4 bits (212), Expect = 2e-15, Method: Composition-based stats. Identities = 61/284 (21%), Positives = 84/284 (29%), Gaps = 47/284 (16%) Query: 2 WPDNRIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQY 61 + +R+ + Y YD GRL +K G + T + +D++ RL Sbjct: 857 YSGSRVTQAGRTHYTYDVQGRLAQKRVTTLSGK-----QLTWTFTWDAEDRLTQVQ---- 907 Query: 62 AEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTR 121 A V RY YD LGRR AK R + R VT Y WDG +L + Sbjct: 908 APGDVAWRYFYDALGRRTAKHRLRAD---------GRIEDVTTYCWDGGQLAEQHTNGVT 958 Query: 122 IQTIYQPGSFTPLIRVETATGELAKTQRR------SLADTLQQSGGEDGGSVVFPPVLVQ 175 + Y PL + E T E ++ RR LA DG Sbjct: 959 LIWDYT--GLHPLAQREAKTQEQGESDRRFFAIVTDLAGAPTDLIAPDGTIAWHSRSTAW 1016 Query: 176 MLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLAL 235 + + A ++ + DP D GL A Sbjct: 1017 GSTQSHRDATAYTPLRYPGQYFDPETGLHYNLNRYYDPELG-----RYTTPDPLGLAPA- 1070 Query: 236 VSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEESG 279 Y NP L + L G D G Sbjct: 1071 -------VNHYTYVP--------NPFTLADPLGLAGCTADPTWG 1099 Score = 72.9 bits (177), Expect = 2e-11, Method: Composition-based stats. Identities = 40/273 (14%), Positives = 78/273 (28%), Gaps = 29/273 (10%) Query: 13 YLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYLY 72 + YD G LTE + + R+ YD+ R+ +T + RY+Y Sbjct: 260 IEFGYDEDGDLTEVINSSGIPL---------RFTYDTLGRITSWTDRNDS----TYRYIY 306 Query: 73 DPLGRRVAKRVWRRERDLTGWMSLSRK--------PQVTWYGWDGDRLTTIQNDRTRIQT 124 D GR V T + + T Y D + + D T Sbjct: 307 DAAGRVVQTVGPSGMLSSTFAYDTTNRITRYTDSMGATTVYQLDERQQIVAETDPLGHTT 366 Query: 125 IYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPV-----LVQMLDR 179 Y + ++ A G + +R + + + + + Sbjct: 367 AYVFDARDRILEQTDALGHTVRFERDERGNLVGFVAPDGLRTTAVFNDLDLPVTITERGG 426 Query: 180 LESEILADRVSEESRRWLASCGLTVEQMQNQM--DPVYTPARKIHLYHCDHRGLPLALVS 237 + D + T ++ + V A ++ D GLP+ + + Sbjct: 427 RQRHFAYDARGNRTAVIDIDRARTDYEVDERGHVTAVRNAAGEVTRIRNDAAGLPVEITA 486 Query: 238 TEGATEWCAEYDEWGNLLNEENPHQLQQLIRLP 270 +GA D +G + + + Sbjct: 487 PDGARVTLVR-DRFGRVTEVTDALGGTMRMTWT 518 Score = 70.2 bits (170), Expect = 1e-10, Method: Composition-based stats. Identities = 38/277 (13%), Positives = 76/277 (27%), Gaps = 36/277 (12%) Query: 7 IARDAHYLYRYDRHGRLTEKTDLIP------------EGVIRTDDERTHRYHYDSQHRLV 54 + + +D G L TD RT D +++ +DS+ RL Sbjct: 528 LPDGTREEWTWDGEGNLLAHTDRAGHTTTHAVTHFDRRTATRTADGAAYQFTHDSELRLA 587 Query: 55 HYTRTQYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTT 114 Q + RY YD GR A+ + Y D T Sbjct: 588 TVVNAQG----QQWRYQYDAAGRLTAET--------------DFDGRTLTYEHDALGRLT 629 Query: 115 IQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLV 174 + + Y+ ++R++ G + ++ + + Sbjct: 630 RRTNAAGQSLAYERDLLGRIVRMQHDDGTTSTFTYDIAGRLVEVTNPHAQIHLERDLAGR 689 Query: 175 QMLDRLESEIL---ADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGL 231 + + + L D + + R S + + YT + + D G Sbjct: 690 VVTESVNGRALARAYDVLGRRTHRRTPSGATSTLTYDERGLAAYTVGEQTFRFERDVLGR 749 Query: 232 -PLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLI 267 + + +D G ++N+ L Sbjct: 750 EVSRTLDD--QLTFSQTWDPVGRIVNQAFTSAHDTLF 784 Score = 55.2 bits (131), Expect = 5e-06, Method: Composition-based stats. Identities = 39/325 (12%), Positives = 64/325 (19%), Gaps = 69/325 (21%) Query: 8 ARDAHYLYRYDRHGRLTEKTDLIPEGV--------------------------------- 34 + YD G T D+ Sbjct: 424 RGGRQRHFAYDARGNRTAVIDIDRARTDYEVDERGHVTAVRNAAGEVTRIRNDAAGLPVE 483 Query: 35 IRTDDERTHRYHYDSQHRLVHYTRTQYAE-----------------PLVESRYLYDPLGR 77 I D D R+ T + +D G Sbjct: 484 ITAPDGARVTLVRDRFGRVTEVTDALGGTMRMTWTIEGRPLWRELPDGTREEWTWDGEGN 543 Query: 78 RVAKRVWRRERDLTGWMSLSRKPQV-------TWYGWDGDRLTTIQNDRTRIQTIYQPGS 130 +A R+ + D + + Q YQ + Sbjct: 544 LLAHTDRAGHTTTHAVTHFDRRTATRTADGAAYQFTHDSELRLATVVNAQGQQWRYQYDA 603 Query: 131 FTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQML------DRLESEI 184 L G + +L L + G S+ + L+ + D S Sbjct: 604 AGRLTAETDFDGRTLTYEHDALG-RLTRRTNAAGQSLAYERDLLGRIVRMQHDDGTTSTF 662 Query: 185 LADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEW 244 D + +E+ + + D G + GA Sbjct: 663 TYDIAGRLVEVTNPHAQIHLERDLAGRVVTESVNGRALARAYDVLGRRTHRRTPSGA-TS 721 Query: 245 CAEYDEWGNLLNEENPHQLQQLIRL 269 YDE G +Q R Sbjct: 722 TLTYDERGLAAYTVG----EQTFRF 742 >UniRef50_C7QAC6 YD repeat protein n=2 Tax=Bacteria RepID=C7QAC6_CATAD Length = 1508 Score = 189 bits (480), Expect = 2e-46, Method: Composition-based stats. Identities = 71/379 (18%), Positives = 111/379 (29%), Gaps = 41/379 (10%) Query: 16 RYDRHGRL-TEKTDLIPEGVIRTDDERTHRYHY---------------------DSQHRL 53 +D GR+ TE+ R D + Y Y D + R+ Sbjct: 1058 AFDAAGRIATERIATERIATERIDPSLSRSYAYHADGVPAAVTDSLRGTQEYIADPRGRI 1117 Query: 54 VHYTRTQYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRK---PQVTWYGWDGD 110 Y YD G V + G + Y +D Sbjct: 1118 SEVRGPHGGG----ESYSYDGFGNIVQAASALSTDSIGGRDVRGTRVLRAGHVHYDYDAA 1173 Query: 111 ----RLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGS 166 R+ + + L + G + L L + G+ Sbjct: 1174 GRVVRIRKQTLSGQVRIQTFAWDADGRLKQAVLPDGSAWHYRYDPLGRRLAKQHVLADGT 1233 Query: 167 VVFPPVLVQMLDRLESEILADRVSEESR-RWLASCGLTVEQM-----QNQMDPVYTPARK 220 RL + D + W + Sbjct: 1234 EAERVEFAWDGPRLIEQHSLDAAGRTTTVTWDYDPDTGLPVAQRRRSWAAEAAQERVDEM 1293 Query: 221 IHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQ--LQQLIRLPGQQYDEES 278 H + G+P LV+ +G W D +G + L+ +R GQ +D E+ Sbjct: 1294 FHAIVTNLVGMPTELVTPDGRVAWYQNTDLYGQSVAVATGGDPDLECPLRFAGQYFDAET 1353 Query: 279 GLYYNRHRYYDPLQGRYITQDPIGLKGGWNFYQYPLNPVQYIDSMGLASKYGHLNNGGYG 338 GL+YN RYYDP Y+T DP+GL N + Y NP+ +D +GLAS + Sbjct: 1354 GLHYNVQRYYDPAIAAYLTPDPLGLAPALNDHAYVPNPLTMVDPLGLASGARVPSPPFSA 1413 Query: 339 ARPNKPPTPDPSKLPDIAK 357 + P + D+ K Sbjct: 1414 GGYSTPGNNQELNVDDMLK 1432 Score = 86.4 bits (212), Expect = 2e-15, Method: Composition-based stats. Identities = 37/225 (16%), Positives = 62/225 (27%), Gaps = 23/225 (10%) Query: 4 DNRIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAE 63 R+ R H Y YD GR+ G +R + +D+ RL + Sbjct: 1157 GTRVLRAGHVHYDYDAAGRVVRIRKQTLSGQVRI-----QTFAWDADGRLKQAVLPDGS- 1210 Query: 64 PLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQ-----ND 118 Y YDPLGRR+AK+ + + + WDG RL Sbjct: 1211 ---AWHYRYDPLGRRLAKQHVLADGTEA---------ERVEFAWDGPRLIEQHSLDAAGR 1258 Query: 119 RTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLD 178 T + Y P + P+ + + A +R + + + P Sbjct: 1259 TTTVTWDYDPDTGLPVAQRRRSWAAEAAQERVDEMFHAIVTNLVGMPTELVTPDGRVAWY 1318 Query: 179 RLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHL 223 + C L + + + Sbjct: 1319 QNTDLYGQSVAVATGGDPDLECPLRFAGQYFDAETGLHYNVQRYY 1363 Score = 82.2 bits (201), Expect = 4e-14, Method: Composition-based stats. Identities = 42/274 (15%), Positives = 77/274 (28%), Gaps = 33/274 (12%) Query: 14 LYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYLYD 73 Y YD HGRLT + + Y +D HR+ + Y YD Sbjct: 554 RYEYDEHGRLTGVVNSSGMP---------YTYQWDDFHRITAWVDRSG----FRYSYEYD 600 Query: 74 PLGRRVAKRVWRRERDLTGWMSLSRKPQVT----------WYGWDGDRLTTIQNDRTRIQ 123 GR V R + L+G + + T Y +D + + + Sbjct: 601 TNGRVV--RGVGADGYLSGDFAYDPAARTTVFTDSLNRAKTYHYDLNGHLDRAVEASGAA 658 Query: 124 TIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGG-----SVVFPPVLVQMLD 178 ++ ++ +R G R + +T++ + + + P V D Sbjct: 659 LVFLDDAYGRRLRGTDRRGMTTVFDRDAAGNTIRVQRPDGTTLSAEFNALNSPTSVVQAD 718 Query: 179 RLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPA--RKIHLYHCDHRGLPLALV 236 D + T + V Y D G +++ Sbjct: 719 GTCWRQEHDAAGNVIVQLDPLDARTEFGYDSLGALVSITDDAGDRTAYEVDAAGQTVSVT 778 Query: 237 STEGATEWCAEYDEWGNLLNEENPHQLQQLIRLP 270 +G+ E D +G ++ P Sbjct: 779 GPDGS-VHRIERDAFGRVVAVTAPDGGVTRYAWS 811 Score = 66.0 bits (159), Expect = 3e-09, Method: Composition-based stats. Identities = 54/349 (15%), Positives = 89/349 (25%), Gaps = 81/349 (23%) Query: 5 NRIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEP 64 R DA Y Y YD +GR+ + + YD+ R+V T Sbjct: 944 GRQTVDAEYTYGYDANGRMLSAS----------GAGSRLEFAYDAVGRVVAETID----- 988 Query: 65 LVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRK--------PQVTWYGWDGDRLTTIQ 116 +R YD LGRRVA+ + + R Q Y G ++ Sbjct: 989 GRTTRSGYDALGRRVARVTPAGAESSWRYDATGRAVVFAAGDVEQHIGYDLGGREVSRAL 1048 Query: 117 NDRTRIQTI------------------------------YQPGSFTPLIRVETATGELAK 146 + + Y + V + + Sbjct: 1049 GIGGAVLSRAFDAAGRIATERIATERIATERIDPSLSRSYAYHADGVPAAVTDSLRGTQE 1108 Query: 147 TQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSEESRR----------- 195 + + G GG + + + S + D + R Sbjct: 1109 YIADPRG-RISEVRGPHGGGESYSYDGFGNIVQAASALSTDSIGGRDVRGTRVLRAGHVH 1167 Query: 196 WLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLL 255 + V +++ Q + D G V +G+ W YD G L Sbjct: 1168 YDYDAAGRVVRIRKQTLSGQVRIQTFAW---DADGRLKQAVLPDGS-AWHYRYDPLGRRL 1223 Query: 256 N-----EENPHQLQQLIRLPGQQYDEESGLYYNRHR------YYDPLQG 293 + + G + E+ L R YDP G Sbjct: 1224 AKQHVLADGTEAERVEFAWDGPRLIEQHSLDAAG-RTTTVTWDYDPDTG 1271 Score = 62.5 bits (150), Expect = 3e-08, Method: Composition-based stats. Identities = 39/296 (13%), Positives = 67/296 (22%), Gaps = 54/296 (18%) Query: 10 DAHYLYRYDRHGRLTEKTDLIPEGVIRT------------DDERTHRYHYDSQHRLVHYT 57 DA + YD G L TD + D HR D+ R+V T Sbjct: 740 DARTEFGYDSLGALVSITDDAGDRTAYEVDAAGQTVSVTGPDGSVHRIERDAFGRVVAVT 799 Query: 58 RTQYAEPLVESR-----------------YLYDPLGRRVAKRVWRRERDLTGWMSLS--- 97 + D G VA Sbjct: 800 APDGGVTRYAWSVEGGLRSRVRPDGSREAWETDADGNLVAYTDQLGAVTRYEVGPFGKVA 859 Query: 98 ----RKPQVTWYGWDGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLA 153 Y +D + ++Q Y L++ + Sbjct: 860 ARIEADATRFEYRYDTEMQVVSVTGPGQVQWSYTYDQSGNLVQETDYNDRSLAYSYDADG 919 Query: 154 DTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDP 213 L +S G +VF + ++ + + + + Sbjct: 920 W-LAESVDALGQRMVFQRDPL-------GRVVGRQTVDAEYTYGYDANGRMLSASGAGSR 971 Query: 214 VYTPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRL 269 + + D G +A +G T + YD G + P + R Sbjct: 972 LE--------FAYDAVGRVVAET-IDGRTT-RSGYDALGRRVARVTPAGAESSWRY 1017 Score = 62.1 bits (149), Expect = 5e-08, Method: Composition-based stats. Identities = 51/281 (18%), Positives = 82/281 (29%), Gaps = 33/281 (11%) Query: 3 PDNRIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQ-----HRLVHYT 57 PD +I DR+ + PEG + +R D+ R+ Sbjct: 486 PDGQIRDVVRIS---DRNANRIDIV-RDPEGTPTGVEHNGYRLAIDAVATTNGPRVAAIR 541 Query: 58 RTQYAE-PLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQ 116 +E +V RY YD GR ++ Y WD T Sbjct: 542 LLDGSEQGVVVKRYEYDEHGRLT--------------GVVNSSGMPYTYQWDDFHRITAW 587 Query: 117 NDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQM 176 DR+ + Y+ + ++R A G L+ A + + L Sbjct: 588 VDRSGFRYSYEYDTNGRVVRGVGADGYLSGDFAYDPAARTTVFTDSLNRAKTYHYDLNGH 647 Query: 177 LDRLES------EILADRVSEESRRWLASCGLTVEQMQNQMDP--VYTPARKIHLYHCDH 228 LDR L D R TV + V P + Sbjct: 648 LDRAVEASGAALVFLDDAYGRRLRGTDRRGMTTVFDRDAAGNTIRVQRPDGTTLSAEFNA 707 Query: 229 RGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRL 269 P ++V +G W E+D GN++ + +P + Sbjct: 708 LNSPTSVVQADGT-CWRQEHDAAGNVIVQLDPLDARTEFGY 747 >UniRef50_A9FBU5 Conserved carbohydrate-binding protein, Rhs family n=2 Tax=Proteobacteria RepID=A9FBU5_SORC5 Length = 1300 Score = 189 bits (480), Expect = 2e-46, Method: Composition-based stats. Identities = 88/408 (21%), Positives = 126/408 (30%), Gaps = 58/408 (14%) Query: 7 IARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDD--------------------------- 39 + A YD GRL+E+ + +R D Sbjct: 793 LKGGARIDMAYDALGRLSERRIVSSTSGVRGRDLSVQPAWVGRLPPGTVHAEWRRYTPAG 852 Query: 40 ---------ERTHRYHYDSQHRLVHYTRTQYAEPLVESRYLYDPLGRRVAKRVWRRERDL 90 +Y YD +L R + + YD G + Sbjct: 853 LLEEHWSARGGVTQYGYDPAGQLAGVRR----HGGEVASFRYDLAGN-LHDATPGAPPRS 907 Query: 91 TGWMSLSRKPQVTWYGWDGDRLTTI----QNDRTRIQTIYQPGSFTPLIRVETATGELAK 146 ++ T Y WD D + T Y + L RVE GE+ Sbjct: 908 YAVGGRIQRAGDTEYTWDEDGRLVTKRIRRTAGEEELTRYLWSASGMLARVERPDGEIVA 967 Query: 147 TQRRSLADTLQQS----GGEDGGSVVFPPVLVQMLDRLESEILADR-------VSEESRR 195 + + + + +V V L EI V E + Sbjct: 968 FEYDPFGRRVAKRLLARTADGSERLVEATRFVWDGGALVHEIRRKTDAGGDPIVDERTYV 1027 Query: 196 WLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLL 255 + + V + + Y D G P LV +G D WG+ Sbjct: 1028 FEHDRTVPVAHREARAQGGARTVSAWWHYLTDDSGAPEMLVGPDGQIGCELARDPWGSAT 1087 Query: 256 NEENPHQLQQLIRLPGQQYDEESGLYYNRHRYYDPLQGRYITQDPIGLKGGWNFYQYPLN 315 + E Q +R GQ DEE+GL YNR+RYYDP GRYI+ DP+G++GG N + Y N Sbjct: 1088 SAEGA-QTSTPLRFRGQYADEETGLSYNRYRYYDPELGRYISADPLGIEGGLNVFAYAAN 1146 Query: 316 -PVQYIDSMGLASKYGHLNNGGYGARPNKPPTPDPSKLPDIAKQLRLP 362 P +D GL G A + T P A P Sbjct: 1147 CPTSAVDVEGLMYSIIKDRAGNIVADGHSQDTGRPLPASHSAVPNGKP 1194 Score = 82.2 bits (201), Expect = 4e-14, Method: Composition-based stats. Identities = 63/467 (13%), Positives = 117/467 (25%), Gaps = 73/467 (15%) Query: 14 LYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYLYD 73 Y YD GRL E D D RY YD+ HRL T + + YD Sbjct: 274 RYAYDAGGRLVEAADA---------DGYVTRYEYDASHRLTSITGPTG----LMFSFRYD 320 Query: 74 PLGRRV----------------------------AKRVWRRERDLTGWMSLSRKPQVTWY 105 GR V A+ + + + +G V + Sbjct: 321 DQGRCVETWGEYLGKADPSLTDDVPEMLADHVTRARGILHTKLEYSGDGYSEAVDSVALH 380 Query: 106 GWDGDRLTTIQNDRT-RIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDG 164 + G+ + T L G +R ++ + Sbjct: 381 RYFGNAHGLVDKAVTPLGVFGRTYDKRGFLASFTDPLGARTTWKRDAMGRETEVVDPLGR 440 Query: 165 GSVVFP---PVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYT--PAR 219 +V+ + ++ DR + + + + P+ P Sbjct: 441 RTVIERDASGEITAVIGPDGETTRVDRAGDSLFWTDPIGAVCSARFDARGLPIEVRWPDG 500 Query: 220 KIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEESG 279 + ++ D +G + + GA A YD WG + + + +G Sbjct: 501 RTLVFRRDVQGNVIEHIDQAGAQT-RARYDAWGRCVELWDARGGRTAFTYS-------TG 552 Query: 280 LYYNRHRYYDPLQGRYITQDPIGLKGGWNFYQY--PLNPVQYIDSMGLASKYGHLNNGGY 337 GR ++ I G Y+Y N + + G ++ + Sbjct: 553 -------------GRVLSV--ISPDGSVERYEYDGAGNLISLTEPDGQTTRITYGGLHKP 597 Query: 338 GARPNKPPTPDPSKLPDIAKQLRLPYPI-DQASSAPNVFKTFFRALSPYDYTLYCRKWVK 396 K +R+ + S N+ + L Sbjct: 598 VRVERPNGEVTELKYNREGWLMRVTNGRGEVHSYERNLAGLVIAERTFDGRVLRYGYDAM 657 Query: 397 PNLTCTPQDDSQYPGMDTKTASDYLPQTNWPTTQLPPGYTCAEPYLF 443 + + Q A + T+ Y +F Sbjct: 658 GRVVWSENGLGQRSEYKRDLAGQMTRRIFDDGTEESFEYNGRGEIIF 704 Score = 50.2 bits (118), Expect = 2e-04, Method: Composition-based stats. Identities = 38/288 (13%), Positives = 83/288 (28%), Gaps = 48/288 (16%) Query: 10 DAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEP----- 64 A ++ D GR TE D + + D+ + Sbjct: 418 GARTTWKRDAMGRETEVVDPLGRRTVIER---------DASGEITAVIGPDGETTRVDRA 468 Query: 65 ----------LVESRYLYDPLGRRVAKR-------VWRRERDLTGWMSLSRKPQVTWYGW 107 +D G + R V+RR+ + + T + Sbjct: 469 GDSLFWTDPIGAVCSARFDARGLPIEVRWPDGRTLVFRRDVQGNVIEHIDQAGAQTRARY 528 Query: 108 DGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSV 167 D D +T + + ++ V + G + + + + + + + + Sbjct: 529 DAWGRCVELWDARGGRTAFTYSTGGRVLSVISPDGSVERYEYDGAGNLISLTEPDGQTTR 588 Query: 168 VFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCD 227 + L + +R + E + + ++ N ++H Y + Sbjct: 589 ITYG-------GLHKPVRVERPNGEVTELKYNREGWLMRVTNGR-------GEVHSYERN 634 Query: 228 HRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIR--LPGQQ 273 GL +A + +G YD G ++ EN + + L GQ Sbjct: 635 LAGLVIAERTFDGRVL-RYGYDAMGRVVWSENGLGQRSEYKRDLAGQM 681 Score = 48.3 bits (113), Expect = 7e-04, Method: Composition-based stats. Identities = 45/374 (12%), Positives = 86/374 (22%), Gaps = 60/374 (16%) Query: 73 DPLGRRVAKRVWRRERDLTGWMSLSRKPQVT----WYGWDGDRLTTIQNDRTRIQTIYQP 128 D GR V R R + Y +D D T Y+ Sbjct: 239 DASGRIVRVLRGRDRRIAAFEAKNTVAQGRWVAFARYAYDAGGRLVEAADADGYVTRYEY 298 Query: 129 GSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADR 188 + L + TG + + ++ G G + P L + + ++ + Sbjct: 299 DASHRLTSITGPTGLMFSFRYDDQGRCVETWGEYLGKA---DPSLTDDVPEMLADHVTRA 355 Query: 189 VSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWCAEY 248 + S E + + +H Y + GL V+ G Sbjct: 356 RGILHTKLEYSGDGYSEAVDSVA---------LHRYFGNAHGLVDKAVTPLG-------- 398 Query: 249 DEWGNLLNEENPHQLQQLIRLPGQQYDEESGLYYNRHRYYDPLQGRYITQDPIGLKGGWN 308 +G ++ DP+G + W Sbjct: 399 -VFGRTYDKRGFLASFT---------------------------------DPLGARTTWK 424 Query: 309 FYQYPLNPVQYIDSMGLASKYGHLNNGGYGARPNKPPTPDPSKLPDIAKQLRLPYPIDQA 368 + +D +G + +G A + P Sbjct: 425 RDAMGRE-TEVVDPLGRRTVIERDASGEITAVIGPDGETTRVDRAGDSLFWTDPIGA-VC 482 Query: 369 SSAPNVFKTFFRALSPYDYTLYCRKWVKPNLTCTPQDDSQYPGMDTKTASDYLPQTNWPT 428 S+ + P TL R+ V+ N+ + + Sbjct: 483 SARFDARGLPIEVRWPDGRTLVFRRDVQGNVIEHIDQAGAQTRARYDAWGRCVELWDARG 542 Query: 429 TQLPPGYTCAEPYL 442 + Y+ L Sbjct: 543 GRTAFTYSTGGRVL 556 Score = 47.1 bits (110), Expect = 0.001, Method: Composition-based stats. Identities = 38/288 (13%), Positives = 63/288 (21%), Gaps = 42/288 (14%) Query: 6 RIARDAHYLYRYDRHGRLT------------EKTDLIPEGVIRTDDERTHRYHYDSQHRL 53 R Y YD GR+ ++ DD + Y+ + + Sbjct: 643 RTFDGRVLRYGYDAMGRVVWSENGLGQRSEYKRDLAGQMTRRIFDDGTEESFEYNGRGEI 702 Query: 54 VHYTRTQYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLT 113 + R+ +D T ++ + T Y G+ Sbjct: 703 IFAENAAG-------RFAFDRN-------EKGWIVAETQEVAGAPVTVQTEYRITGEVAA 748 Query: 114 TIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVL 173 + Q + F G+ R + G + Sbjct: 749 RRTSLGHTAQWSHD---FARQQVALFLDGQAEAVSTRDPWGRELTRSLKGGARIDMAYDA 805 Query: 174 VQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPL 233 + L + L+V+ P T + Y GL Sbjct: 806 LGRLSERRIVSSTSG--------VRGRDLSVQPAWVGRLPPGTVHAEWRRYTP--AGLLE 855 Query: 234 ALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRL--PGQQYDEESG 279 S G YD G L R G +D G Sbjct: 856 EHWSARGGVT-QYGYDPAGQLAGVRRHGGEVASFRYDLAGNLHDATPG 902 >UniRef50_B1HM94 Cell wall-associated protein n=5 Tax=Lysinibacillus sphaericus C3-41 RepID=B1HM94_LYSSC Length = 995 Score = 189 bits (479), Expect = 3e-46, Method: Composition-based stats. Identities = 76/415 (18%), Positives = 133/415 (32%), Gaps = 32/415 (7%) Query: 5 NRIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEP 64 N Y YD + ++++ T+ Y YD ++LV + Sbjct: 581 NSSTTWRTNEYEYDNNQQISKVTNDDGSV----------TYTYDVLNQLVEEQYSNG--- 627 Query: 65 LVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQT 124 + Y YD +G R +K + T + Q+ G ++ N Sbjct: 628 -LTISYTYDTVGNRNSKTTLQNGSTTTTNYGYNDANQMKAVGGKAYTVSPNGNVTNDGVF 686 Query: 125 IYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEI 184 Y +F L V++ T + R S +G + + Sbjct: 687 QYVWNAFDQLTEVKSLTDATVASYRYDENGRRVYSKDNNGETY-----YRYNGLSNQVLF 741 Query: 185 LADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEW 244 D ++ + M NQ + Y ++RG LAL +T G Sbjct: 742 EEDASGAITKAYTYDASGHPLTMTNQGS--------TYYYLTNYRGDVLALTNTNGDIVA 793 Query: 245 CAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEESGLYYNRHRYYDPLQGRYITQDPIG-- 302 YD WGN+L++ R G +YDE++ LYY RYY+P G ++++DP+ Sbjct: 794 QYTYDAWGNILSQSGTMAAINPYRYAGYRYDEKTKLYYLMARYYNPDTGVFLSRDPVRGD 853 Query: 303 --LKGGWNFYQYP-LNPVQYIDSMGLASKYGHLNNGGYGARPNKPPTPDPSKLPDIAKQL 359 +N Y Y NPV +D G ++ ++ Y L + Sbjct: 854 TMTPISFNGYSYTNNNPVMNVDPSGKFIQFVYIAEYIYIGYRTYKTYKKIKVLVKSGLKF 913 Query: 360 RLPYPIDQASSAPNVFKTFFRALSPYDYTLYCRKWVKPNLTCTPQDDSQYPGMDT 414 A+ A V + + R T + + ++ Sbjct: 914 AETPAKHMANPARQVPASLLKQALKGKPYPDPRGSSANMYYTTIYINGKKYNLEV 968 Score = 62.5 bits (150), Expect = 3e-08, Method: Composition-based stats. Identities = 31/277 (11%), Positives = 69/277 (24%), Gaps = 31/277 (11%) Query: 13 YLYRYDRHGRLTEKTDLIPE------------GVIRTDDERTHRYHYDSQHRLVHYTRTQ 60 Y DR + T + T Y D + ++ Sbjct: 157 TNYSLDRTNNIVSVTSPEGTVTRYGLNDNFSVTKLFDPSGDTITYTLDGNYNVLSQKVVY 216 Query: 61 YAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSR-------KPQVTWYGWDGDRLT 113 Y+YD G ++ + + + + S Q + Sbjct: 217 TDGATYTKDYIYDTKGNMLSTTDSKGVTESYTYNAYSNFLTLTDANGQTNTNTYYDKGNL 276 Query: 114 TIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVL 173 T Y + + +VE G++ + + +D V Sbjct: 277 KTSTTPKGETTTYTYNDYGDMTQVEYPDGKIETFNTNYENNQKTTTYRDDQLKVTTITTT 336 Query: 174 VQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPL 233 + L + +++ ++N++ V A K Y D Sbjct: 337 DFHGNILSYQDGKGEITKYRY-----------NLKNELVEVQDAANKTTTYTYDANSNLT 385 Query: 234 ALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRLP 270 ++ + G +Y+ + E N + + Sbjct: 386 SVTNDAGKKT-SFKYNAQNAIEKETNAEEKVTTYKYN 421 Score = 50.6 bits (119), Expect = 1e-04, Method: Composition-based stats. Identities = 21/154 (13%), Positives = 40/154 (25%), Gaps = 21/154 (13%) Query: 3 PDNRIARDAHYLYRYDRHGRLTE------------KTDLIPEGVIRTDDERTHRYHYDSQ 50 P+ + D + Y ++ +LTE + D V D+ Y Y+ Sbjct: 676 PNGNVTNDGVFQYVWNAFDQLTEVKSLTDATVASYRYDENGRRVYSKDNNGETYYRYNGL 735 Query: 51 HRLVHYTRTQYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWM-------SLSRKPQVT 103 + A + Y YD G + + + V Sbjct: 736 SN--QVLFEEDASGAITKAYTYDASGHPLTMTNQGSTYYYLTNYRGDVLALTNTNGDIVA 793 Query: 104 WYGWDGDRLTTIQNDRTRIQTIYQPGSFTPLIRV 137 Y +D Q+ Y+ + + Sbjct: 794 QYTYDAWGNILSQSGTMAAINPYRYAGYRYDEKT 827 Score = 44.0 bits (102), Expect = 0.013, Method: Composition-based stats. Identities = 25/201 (12%), Positives = 50/201 (24%), Gaps = 40/201 (19%) Query: 12 HYLYRYDRHGRLTEKTDLIPEGVIRT------------DDERTHRYHYDSQHRLVHYTRT 59 Y Y+ + TD + T T Y Y+ + Sbjct: 244 TESYTYNAYSNFLTLTDANGQTNTNTYYDKGNLKTSTTPKGETTTYTYNDYGDMTQVEYP 303 Query: 60 QYAEPLVESRY-------LY-------------DPLGRRVAKRVWRRERDLTGWMSLS-- 97 + Y Y D G ++ + + E + + Sbjct: 304 DGKIETFNTNYENNQKTTTYRDDQLKVTTITTTDFHGNILSYQDGKGEITKYRYNLKNEL 363 Query: 98 -----RKPQVTWYGWDGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSL 152 + T Y +D + T + +T ++ + I ET E T + + Sbjct: 364 VEVQDAANKTTTYTYDANSNLTSVTNDAGKKTSFKYNAQN-AIEKETNAEEKVTTYKYNA 422 Query: 153 ADTLQQSGGEDGGSVVFPPVL 173 L + G + + Sbjct: 423 DGKLNEVVNATGDKIAYSTST 443 Score = 42.9 bits (99), Expect = 0.026, Method: Composition-based stats. Identities = 35/262 (13%), Positives = 78/262 (29%), Gaps = 42/262 (16%) Query: 28 DLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYLYDPLGRRVAKRVWRRE 87 ++ + + T Y Y++ ++L T K +++ E Sbjct: 31 EVAYITEQKDLNSNTITYAYNTLNQLTSITT------------------NLGTKLLFKYE 72 Query: 88 RDLTGWMSLSRKPQVTWYGWDG--DRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELA 145 + + + Y DG R+ ++D T T + + LI++ + G+ Sbjct: 73 GGVITNAKYNDRDITYKYT-DGYLTRVLVKKDDETSTPTSFYYTTNGQLIKIIDSNGKTM 131 Query: 146 KTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVE 205 S D + + G V + LDR + + R+ + +V Sbjct: 132 LYGYNSDMDLVSVTEPSLDGQVA--SITNYSLDRTNNIVSVTSPEGTVTRYGLNDNFSVT 189 Query: 206 QMQNQMDPVYTPARKIHL------------------YHCDHRGLPLALVSTEGATEWCAE 247 ++ + T + Y D +G L+ ++G Sbjct: 190 KLFDPSGDTITYTLDGNYNVLSQKVVYTDGATYTKDYIYDTKGNMLSTTDSKG-VTESYT 248 Query: 248 YDEWGNLLNEENPHQLQQLIRL 269 Y+ + N L + + Sbjct: 249 YNAYSNFLTLTDANGQTNTNTY 270 Score = 42.1 bits (97), Expect = 0.046, Method: Composition-based stats. Identities = 35/272 (12%), Positives = 67/272 (24%), Gaps = 31/272 (11%) Query: 9 RDAHYLYRYDRHGRLTEKTDLIPEG----------VIRTDDERTHRYHYDSQHRLVHYTR 58 Y Y+ +LT T + ++R Y Y + L Sbjct: 42 NSNTITYAYNTLNQLTSITTNLGTKLLFKYEGGVITNAKYNDRDITYKY-TDGYLTRVLV 100 Query: 59 TQYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQND 118 + E + + Y G+ + + L G+ S VT DG Sbjct: 101 KKDDETSTPTSFYYTTNGQLIKIIDSNGKTMLYGYNSDMDLVSVTEPSLDG--------- 151 Query: 119 RTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLD 178 + T Y ++ V + G + + + + G ++ + + Sbjct: 152 QVASITNYSLDRTNNIVSVTSPEGTVTRYGLNDNFS-VTKLFDPSGDTITYTLDGNYNVL 210 Query: 179 RLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVST 238 + + + + + YT + L Sbjct: 211 SQKVVYTDGATYTKDYIYDTKGNMLSTTDSKGVTESYTYNAYSNFL---------TLTDA 261 Query: 239 EGATEWCAEYDEWGNLLNEENPHQLQQLIRLP 270 G T YD+ GNL P Sbjct: 262 NGQTNTNTYYDK-GNLKTSTTPKGETTTYTYN 292 >UniRef50_B4SV70 Rhs-family protein n=42 Tax=Enterobacteriaceae RepID=B4SV70_SALNS Length = 1359 Score = 188 bits (478), Expect = 3e-46, Method: Composition-based stats. Identities = 73/304 (24%), Positives = 119/304 (39%), Gaps = 24/304 (7%) Query: 27 TDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYLYDPLGRRVAKRVWRR 86 + G I + Y YD L + + RY YD G + Sbjct: 969 NNHGEVGTIDDGLRGSVVYSYDRSGYLTG----RSGQMYDHDRYYYDKAGNLL-----DN 1019 Query: 87 ERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAK 146 E + YG++ T + D+ + + L RV + E Sbjct: 1020 EGQGPVMNNRLPGCGRDRYGYNEWGELTTRRDQQL-----EWNAQGQLTRVISGNTET-H 1073 Query: 147 TQRRSLADTLQQSGGE--DGGSVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTV 204 +L ++++ G + V RL E + + R +L Sbjct: 1074 YGYDALGRRIRKATYGRHTGHTARSRTDFVWEGFRLLQENVQQ---QGWRTYLYDAEQPY 1130 Query: 205 EQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNE--ENPHQ 262 + + +R++ YH D G P + + +G W +G + + Sbjct: 1131 TPVASVTG--KGESRQVWYYHTDVTGTPQEVTAADGTLVWAGYIRGFGENAADISNSGAY 1188 Query: 263 LQQLIRLPGQQYDEESGLYYNRHRYYDPLQGRYITQDPIGLKGGWNFYQYPLNPVQYIDS 322 Q +RLPGQ +D+E+GL+YN RYY P GR+++QDPIGL+GG N Y Y NP+++ID Sbjct: 1189 FHQPLRLPGQYFDDETGLHYNLFRYYAPECGRFVSQDPIGLRGGLNLYAYAPNPIRWIDP 1248 Query: 323 MGLA 326 +GLA Sbjct: 1249 LGLA 1252 Score = 74.1 bits (180), Expect = 1e-11, Method: Composition-based stats. Identities = 38/194 (19%), Positives = 60/194 (30%), Gaps = 23/194 (11%) Query: 2 WPDNRIAR-DAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTR-- 58 + R + H Y YD+ G L + P R RY Y+ L Sbjct: 994 YLTGRSGQMYDHDRYYYDKAGNLLDNEGQGPVMNNRLPGCGRDRYGYNEWGELTTRRDQQ 1053 Query: 59 ---------TQYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDG 109 T+ E+ Y YD LGRR+ K + R T T + W+G Sbjct: 1054 LEWNAQGQLTRVISGNTETHYGYDALGRRIRKATYGRHTGHTARS-------RTDFVWEG 1106 Query: 110 DRLTTIQNDRTRIQTIYQPGS---FTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGS 166 RL + +T Y + +TP+ V + Q G+ Sbjct: 1107 FRLLQENVQQQGWRT-YLYDAEQPYTPVASVTGKGESRQVWYYHTDVTGTPQEVTAADGT 1165 Query: 167 VVFPPVLVQMLDRL 180 +V+ + + Sbjct: 1166 LVWAGYIRGFGENA 1179 Score = 66.4 bits (160), Expect = 3e-09, Method: Composition-based stats. Identities = 44/293 (15%), Positives = 81/293 (27%), Gaps = 37/293 (12%) Query: 8 ARDAHYLYRYDRHGRLTEKTDLIPE------------GVIRTDDERTHRYHY---DSQHR 52 R YRYD +G+LT + T RY + D R Sbjct: 401 TRGNLVEYRYDDNGQLTGVVNRAGTQVRQFAYENGLMTAHSNAAGFTCRYRWQELDGAPR 460 Query: 53 LVHYTRTQYAEPLVESRYLYD-------PLGRRVAKRVWRRERDLTGWMSLSRKPQVTWY 105 + + + R+ YD GR+ W +R+ + + + Sbjct: 461 VTEHDTSDG----EHYRFDYDFAAGTTTVTGRQGESWQWWYDRETYITAHRTPGGGMYRF 516 Query: 106 GWDGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGG 165 ++ D Y+ +++ G + +TQ D + ++ +D Sbjct: 517 TYNEDHFPVNIELPGGRTVAYEYDIQNRVVKTTDPEGRVTQTQWNGEFDEITRTALDDDA 576 Query: 166 SVVFPP------VLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPA- 218 V + ++ D + R A+ G V ++ Sbjct: 577 VWKTQYNAHGQPVQETDPEGRVTQYAYDEQGQMCSRTDAAGGTVVTAFDSRGQMTRYTDC 636 Query: 219 -RKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRLP 270 + Y D G + EG Y+ G L E +Q R Sbjct: 637 SGRSTGYDHDEDGNLTRVTDAEGKVV-RISYNRLG--LPETVNSPGKQQDRYT 686 Score = 61.4 bits (147), Expect = 8e-08, Method: Composition-based stats. Identities = 34/259 (13%), Positives = 64/259 (24%), Gaps = 26/259 (10%) Query: 10 DAHYLYRYDRHGRLTEKTDLIP------------EGVIRTDDERTHRYHYDSQHRLVHYT 57 Y +D G LT TD + + ++ RY +++ L+ Sbjct: 638 GRSTGYDHDEDGNLTRVTDAEGKVVRISYNRLGLPETVNSPGKQQDRYTWNALG-LMSSH 696 Query: 58 RTQYAEPLVESRYLYDPLGRRVAKR-------VWRRERDLTGWMSLSRKPQVTWYGWDGD 110 R + Y P G A W+ + + + D D Sbjct: 697 RRITGS---VESWRYTPRGLLAAHTDEEKRETRWQYTPEGRVAALTNGNGAQYRFSHDAD 753 Query: 111 -RLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVF 169 RL +T S L ++T + + D L + + Sbjct: 754 GRLVREVRPDGLSRTFILDDS-GYLTAIQTTGTQGGVRRETQQRDALGRLLRTENEHCQR 812 Query: 170 PPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHR 229 ++ + ++ R A + + I D Sbjct: 813 TFSYNRLDQITAVTLTPTEAGQQQHRMQADTVRFEYDRSGWLTAEHAGNGSIRY-QRDAL 871 Query: 230 GLPLALVSTEGATEWCAEY 248 G P + +G Y Sbjct: 872 GNPTDITLPDGQHLTHLYY 890 Score = 57.1 bits (136), Expect = 1e-06, Method: Composition-based stats. Identities = 62/450 (13%), Positives = 105/450 (23%), Gaps = 72/450 (16%) Query: 52 RLVHYTRTQYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDR 111 RL Q Y YD G+ + QV + ++ + Sbjct: 390 RLSRIELVQGGTRGNLVEYRYDDNGQLTG-------------VVNRAGTQVRQFAYE-NG 435 Query: 112 LTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPP 171 L T ++ Y+ RV + R + G + Sbjct: 436 LMTAHSNAAGFTCRYRWQELDGAPRVTEHDTSDGEHYRFDYD----FAAGTTTVTGRQGE 491 Query: 172 VLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGL 231 DR R+ + + P + Y D + Sbjct: 492 SWQWWYDRETYITAHRTPGGGMYRFTYNEDHFPV-------NIELPGGRTVAYEYDIQNR 544 Query: 232 PLALVSTEGAT---------------------EWCAEYDEWGNLLNEENPHQLQQLIRLP 270 + EG W +Y+ G + E +P Sbjct: 545 VVKTTDPEGRVTQTQWNGEFDEITRTALDDDAVWKTQYNAHGQPVQETDPEGRVTQYAY- 603 Query: 271 GQQYDEESGLYYNRHRYYDPLQGRYITQ-DPIGLKGGWNFYQYPLNPVQYIDSMGLASKY 329 +E G +R D G +T D G +Y D G ++ Y Sbjct: 604 -----DEQGQMCSRT---DAAGGTVVTAFDSRGQM------------TRYTDCSGRSTGY 643 Query: 330 GHLNNGGYGARPNKPPTPDPSKLPDIAKQLRLPYPIDQASSAP-NVFKTFFRALSPYDYT 388 H +G + + + P Q N Sbjct: 644 DHDEDGNLTRVTDAEGKVVRISYNRLGLPETVNSPGKQQDRYTWNALGLMSSHRRITGSV 703 Query: 389 LYCRKWVKPNLTCTPQDDSQYPGMDTKTASDYLPQTNWPTTQLPPGYTCAEPYLFPDINK 448 R + L ++ + TN Q + + Sbjct: 704 ESWRYTPRGLLAAHTDEEKRETRWQYTPEGRVAALTNGNGAQYRFSHDADGRLVREVR-- 761 Query: 449 PDGPA-TAGIDDLGEILAKMKQRTSRGIRK 477 PDG + T +DD G + A T G+R+ Sbjct: 762 PDGLSRTFILDDSGYLTAIQTTGTQGGVRR 791 Score = 57.1 bits (136), Expect = 2e-06, Method: Composition-based stats. Identities = 37/273 (13%), Positives = 70/273 (25%), Gaps = 29/273 (10%) Query: 7 IARDAHYLYRYDRHGRLTEKTDLIPE-------------GVIRTDDERTHRYHYDSQHRL 53 + Y YD R+ + TD DD+ + Y++ + Sbjct: 529 LPGGRTVAYEYDIQNRVVKTTDPEGRVTQTQWNGEFDEITRTALDDDAVWKTQYNAHGQP 588 Query: 54 VHYTRTQYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSR-------KPQVTWYG 106 V T + ++Y YD G+ ++ +T + S + + T Y Sbjct: 589 VQETDPEG----RVTQYAYDEQGQMCSRTDAAGGTVVTAFDSRGQMTRYTDCSGRSTGYD 644 Query: 107 WDGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLA-DTLQQSGGEDGG 165 D D T D V + + + +L + + Sbjct: 645 HDEDGNLTRVTDAEGKVVRISYNRLGLPETVNSPGKQQDRYTWNALGLMSSHRRITGSVE 704 Query: 166 SVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYH 225 S + P + E + R A Q + D R++ Sbjct: 705 SWRYTPRGLLAAHTDEEKRETRWQYTPEGRVAALTNGNGAQYRFSHDADGRLVREVR--- 761 Query: 226 CDHRGLPLALVSTEGATEWCAEYDEWGNLLNEE 258 D ++ G G + E Sbjct: 762 PDGL-SRTFILDDSGYLTAIQTTGTQGGVRRET 793 Score = 48.3 bits (113), Expect = 7e-04, Method: Composition-based stats. Identities = 35/278 (12%), Positives = 67/278 (24%), Gaps = 33/278 (11%) Query: 11 AHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRY 70 Y+ D G T+ T D + + Y L+ + L S Y Sbjct: 862 GSIRYQRDALGNPTDIT---------LPDGQHLTHLYYGSGHLLQTA----LDGLTVSEY 908 Query: 71 LYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRL--TTIQNDRTRIQTIYQP 128 D L R++ + + Q + L Y Sbjct: 909 ERDSLHRQIMRTQGQLATYSGYDDDGLLSWQRSLAPGSAPVLPGQRPARQGCVTSRDYYW 968 Query: 129 GSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADR 188 + + ++ +SG G S D+ + + + Sbjct: 969 NNHGEVGTIDDGLRGSVVYSYD-------RSGYLTGRSGQMYDHDRYYYDKAGNLLDNEG 1021 Query: 189 VSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWCAEY 248 L CG + +++ + +G ++ G TE Y Sbjct: 1022 QGPVMNNRLPGCGRDRYGYNEWGELTTRRDQQLEW---NAQGQLTRVI--SGNTETHYGY 1076 Query: 249 DEWGNLLNEENPHQLQQLIRLPGQQYDEESGLYYNRHR 286 D G + + R G + + R Sbjct: 1077 DALGRRIRKATYG------RHTGHTARSRTDFVWEGFR 1108 >UniRef50_B4VFT3 Rhs protein n=4 Tax=Bacteria RepID=B4VFT3_9ACTO Length = 1253 Score = 188 bits (478), Expect = 3e-46, Method: Composition-based stats. Identities = 66/348 (18%), Positives = 111/348 (31%), Gaps = 39/348 (11%) Query: 7 IARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHR-----------------YHYDS 49 + + YD GR T ++ +G ++R + D+ Sbjct: 791 LNPALSLTHEYDDMGRRTAQSVTGQDGRALQRRGYSYRADGYLTGIDDSTTGLRTFTLDA 850 Query: 50 QHRLVHYTRTQYAEPLVESRYLYDPLGRRVAKR--------VWRRERDLTGWMSLSRKPQ 101 R+ RY YD G + + + +R TG Sbjct: 851 ASRVTAVET-----ASWSERYAYDEAGNQTSASWPGDHPGAEAQGDRTYTGTRITRAGSV 905 Query: 102 VTWYGWDGDRLTTIQNDRTR--IQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQS 159 + G + +R Y+ + L+ V T G + + L + Sbjct: 906 RYEHDALGRVTLRQKTRLSRKPDTWRYEWNAEDRLVGVTTPDGTRWRYRYDPLGRRTAKQ 965 Query: 160 GGEDGGSVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPAR 219 + GSV+ + + + + + W + Q + Sbjct: 966 RLSESGSVLEETLFAWDG----TTLCEESAGRVTVTWTHQGLHPLTQTERIGQGD--VDD 1019 Query: 220 KIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEESG 279 + D G P L++ +G T W WG + +R PGQ YD ESG Sbjct: 1020 RFFAIVTDLVGTPTHLLAEDGTTAWHTRATLWGTTTWNSDATAY-TPLRFPGQYYDPESG 1078 Query: 280 LYYNRHRYYDPLQGRYITQDPIGLKGGWNFYQYPLNPVQYIDSMGLAS 327 L++N R YDP Y++ DP+GL N Y NP + D +GL Sbjct: 1079 LHHNYFRTYDPETAHYLSPDPLGLAPAPNPTTYVHNPHTWSDPLGLTP 1126 Score = 84.1 bits (206), Expect = 1e-14, Method: Composition-based stats. Identities = 48/233 (20%), Positives = 69/233 (29%), Gaps = 29/233 (12%) Query: 2 WPDNRIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQY 61 + RI R Y +D GR+T + T RY ++++ RLV T Sbjct: 894 YTGTRITRAGSVRYEHDALGRVTLRQKTRLSRKPD-----TWRYEWNAEDRLVGVTTPDG 948 Query: 62 AEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTR 121 RY YDPLGRR AK+ + + T + WDG L R Sbjct: 949 ----TRWRYRYDPLGRRTAKQRLSESGSVL---------EETLFAWDGTTLCEESAGRVT 995 Query: 122 IQTIYQPGSFTPLIRVETAT----GELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQML 177 + +Q PL + E + L T EDG + + Sbjct: 996 VTWTHQ--GLHPLTQTERIGQGDVDDRFFAIVTDLVGTPTHLLAEDGTTAWHTRATLWGT 1053 Query: 178 DRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRG 230 S+ A ++ DP H D G Sbjct: 1054 TTWNSDATAYTPLRFPGQYYDPESGLHHNYFRTYDPETA-----HYLSPDPLG 1101 Score = 72.1 bits (175), Expect = 4e-11, Method: Composition-based stats. Identities = 55/332 (16%), Positives = 80/332 (24%), Gaps = 71/332 (21%) Query: 9 RDAHYLYRYDRHGRLTEKTDLIPEGVIRTDD-----------ERTHRYHY---------- 47 D Y YD G LT +T+ E + T Y Y Sbjct: 650 DDRTLTYGYDASGILTSRTNAAGEATTYEHNALGQVIRKDAAGLTTSYAYDTFDALASAA 709 Query: 48 ----------DSQHRLVHYTRTQYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLS 97 D RL+ T Y YD LGRR + L + + Sbjct: 710 SAESTITWLRDDAGRLLSETVD-----GRTLTYGYDALGRRTGRTTPGGSESLWTYDAAG 764 Query: 98 RKPQVTWY--------GWDGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQR 149 R+ +T G LT N + Y V G + + Sbjct: 765 RRTALTTADRTLTFGRDAAGQELTRTLNPALSLTHEYDDMGRRTAQSVTGQDGRALQRRG 824 Query: 150 RSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQN 209 S +G +D + + L S + A + S R+ Sbjct: 825 YSYRADGYLTGIDDSTTGLRTFTL-----DAASRVTAVETASWSERYAYDEAGNQTSASW 879 Query: 210 QMDPVYTPARKIHLYHCDHR---GLPLALVSTEGAT-------------EWCAEYDEWGN 253 D A+ Y G G W E++ Sbjct: 880 PGDHPGAEAQGDRTYTGTRITRAGSVRYEHDALGRVTLRQKTRLSRKPDTWRYEWNAEDR 939 Query: 254 LLNEENPHQLQQLIRL------PGQQYDEESG 279 L+ P + R +Q ESG Sbjct: 940 LVGVTTPDGTRWRYRYDPLGRRTAKQRLSESG 971 Score = 68.3 bits (165), Expect = 6e-10, Method: Composition-based stats. Identities = 69/476 (14%), Positives = 122/476 (25%), Gaps = 68/476 (14%) Query: 4 DNRIARDAHY-----LYRYDRHG-------------RLTEKTDLIPEGVIRTDDERTHRY 45 + + + YD G RLT +D G+ D + RY Sbjct: 243 GGLLTQLDDRNGAWITFSYDAAGTPLALTHSGGPELRLTS-SDGRITGLALADGTQILRY 301 Query: 46 HYDSQHRLVHYTRTQYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSR------K 99 Y + L T R+ YD LGR + + R Sbjct: 302 GY-TDGHLTEVT----NSSGRPLRFGYDALGRITSWTDTNDRHFDYVYDERHRCIAQSGT 356 Query: 100 PQVTWYGWDGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQS 159 + + T + D T + + TG + + L + Sbjct: 357 NGHLNVRFAYEPGRTTRIDTRGHHTRFLVNDLAQITAEIGPTGATTRFTHDAYNRPLSYT 416 Query: 160 GGEDGGSVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPAR 219 + + +++ V+ R + + + + P R Sbjct: 417 DPLGRTTTLTYDEAGRLV----------CVTRPDGRTSRAEYNALGRPVTLIAPDGRGTR 466 Query: 220 KIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEESG 279 + + D +G ++ GAT YD G+L + + +R + +G Sbjct: 467 QTY----DDQGKRTSVTDPTGATT-HFAYDARGHLASVTDALGNTTTVRC------DRAG 515 Query: 280 LYYNRHRYYDPLQGRYITQDPIGLKGGWNFYQYPLNPVQYIDSMGLASKYGHLNNGGYGA 339 L + T DP+G + PV D +G + G Sbjct: 516 LITS-------------TTDPLGATTTCTRDGFGR-PVAVTDPLGHTAHLTWSVEGRLLR 561 Query: 340 RPNKPPTPDPSKLPDIAKQLRLPYPIDQ-ASSAPNVFKTFFRALSPYDYTLYCRKWVKPN 398 R N T + L + S F P ++ Sbjct: 562 RVNPDGTEESWTYDGEGNCLTHTDAMGGVTVSEYGDFDLLLARTGPDGTRHTFTHDMELR 621 Query: 399 LTCTPQDDSQYPGMDTKTASDYLPQTNWPTTQLPPGYTCAEPYLFPDINKPDGPAT 454 LT A +T++ L GY + + G AT Sbjct: 622 LTEVSNPQGLTWSYVYDEAGRLASETDFDDRTLTYGYDASG--ILTSRTNAAGEAT 675 Score = 66.8 bits (161), Expect = 2e-09, Method: Composition-based stats. Identities = 42/271 (15%), Positives = 77/271 (28%), Gaps = 33/271 (12%) Query: 6 RIARDAHY-LYRYDRHGRLTEKTDLIPEGVIRT------------DDERTHRYHYDSQHR 52 R+ D + YD G TD + + D H + +D + R Sbjct: 562 RVNPDGTEESWTYDGEGNCLTHTDAMGGVTVSEYGDFDLLLARTGPDGTRHTFTHDMELR 621 Query: 53 LVHYTRTQYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMS-------LSRKPQVTWY 105 L + Q + Y+YD GR ++ + G+ + + + T Y Sbjct: 622 LTEVSNPQG----LTWSYVYDEAGRLASETDFDDRTLTYGYDASGILTSRTNAAGEATTY 677 Query: 106 GWDGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGG 165 + I+ D + T Y +F L + R L ++ Sbjct: 678 EHNALGQV-IRKDAAGLTTSYAYDTFDALA-SAASAESTITWLRDDAGRLLSETVDGRTL 735 Query: 166 SVVFPPVLVQML----DRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKI 221 + + + + ES D + A LT + + T + Sbjct: 736 TYGYDALGRRTGRTTPGGSESLWTYDAAGRRTALTTADRTLTFGRDAAGQELTRTLNPAL 795 Query: 222 HLYH-CDHRG--LPLALVSTEGATEWCAEYD 249 L H D G ++ +G Y Sbjct: 796 SLTHEYDDMGRRTAQSVTGQDGRALQRRGYS 826 Score = 66.0 bits (159), Expect = 3e-09, Method: Composition-based stats. Identities = 41/271 (15%), Positives = 75/271 (27%), Gaps = 34/271 (12%) Query: 9 RDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVES 68 + + Y YD GRL +TD D+RT Y YD+ L T + Sbjct: 629 QGLTWSYVYDEAGRLASETD---------FDDRTLTYGYDASGILTSRTNAAG----EAT 675 Query: 69 RYLYDPLGRRVAKRVWRRERDLTGWM------SLSRKPQVTWYGWDGDRLTTIQNDRTRI 122 Y ++ LG+ + K + S + +TW D RL + D + Sbjct: 676 TYEHNALGQVIRKDAAGLTTSYAYDTFDALASAASAESTITWLRDDAGRLLSETVDGRTL 735 Query: 123 QTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLES 182 Y + T G + + + + + ++ L Sbjct: 736 T--YGYDALGRRTGRTTPGGSESLWTYDAAGRRTALTTADRTLTFGRDAAGQELTRTLNP 793 Query: 183 EILADRVSEESRRWLASC-----------GLTVEQMQNQMDPVYTPARKIHLYHCDHRGL 231 + ++ R A + + + + + D Sbjct: 794 ALSLTHEYDDMGRRTAQSVTGQDGRALQRRGYSYRADGYLTGIDDSTTGLRTFTLDAASR 853 Query: 232 PLALVSTEGATEWCAEYDEWGNLLNEENPHQ 262 A+ + YDE GN + P Sbjct: 854 VTAV--ETASWSERYAYDEAGNQTSASWPGD 882 Score = 59.1 bits (141), Expect = 3e-07, Method: Composition-based stats. Identities = 38/328 (11%), Positives = 68/328 (20%), Gaps = 68/328 (20%) Query: 10 DAHYLYRYDRHGRLTEKTDLIPEGVIRT------------DDERTHRYHYDSQHRLVHYT 57 A + YD G L TD + T D R V T Sbjct: 483 GATTHFAYDARGHLASVTDALGNTTTVRCDRAGLITSTTDPLGATTTCTRDGFGRPVAVT 542 Query: 58 RTQYAEP-----------------LVESRYLYDPLGRRVAKRVWRRERDLTGWMSL---- 96 E + YD G + ++ + Sbjct: 543 DPLGHTAHLTWSVEGRLLRRVNPDGTEESWTYDGEGNCLTHTDAMGGVTVSEYGDFDLLL 602 Query: 97 ------------------------SRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQPGSFT 132 + + Y +D + D Y + Sbjct: 603 ARTGPDGTRHTFTHDMELRLTEVSNPQGLTWSYVYDEAGRLASETDFDDRTLTYGYDASG 662 Query: 133 PLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPP----VLVQMLDRLESEILADR 188 L A GE + +L +++ S + + + + D Sbjct: 663 ILTSRTNAAGEATTYEHNALGQVIRKDAAGLTTSYAYDTFDALASAASAESTITWLRDDA 722 Query: 189 VSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWCAEY 248 S + TP L+ D G AL + + Sbjct: 723 GRLLSETVDGRTLTYGYDALGRRTGRTTPGGSESLWTYDAAGRRTALTTADRTLT----- 777 Query: 249 DEWGNLLNEENPHQLQQLIRLPGQQYDE 276 +G + + +YD+ Sbjct: 778 --FGRDAAGQELTRTLNPALSLTHEYDD 803 >UniRef50_A4THD8 Insecticidal toxin n=46 Tax=Yersinia RepID=A4THD8_YERPP Length = 985 Score = 188 bits (478), Expect = 3e-46, Method: Composition-based stats. Identities = 59/389 (15%), Positives = 117/389 (30%), Gaps = 43/389 (11%) Query: 5 NRIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERT--HRYHYDSQHRLVHYTRTQYA 62 +R R Y YD G + + + + Y YD+ ++L+ T + Sbjct: 347 DRPTRLQDLRYDYDPVGNILAIHNDAEATRFYRNQKIVPETTYRYDALYQLIEATGREAD 406 Query: 63 EPL--------------------VESRYLYDPLGRRVAKRVWRRERDLTG-------WMS 95 Y YD G + + + T Sbjct: 407 TNGIQNSQLPALASLNDSNQFVNYTRSYHYDRAGNLLKIQHTGASQYSTHITVSDSSNHG 466 Query: 96 LSRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQPGSFTPLIRVE-----TATGELAKTQRR 150 + ++ +T + + + S L +VE + Sbjct: 467 IQQQEGITARDIRSQFDAAGNQQQLQPGQPLRWNSRNQLQQVEPVPRNDGISDSESYLYD 526 Query: 151 SLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQM--- 207 + ++ + + ++ + E + + Q+ Sbjct: 527 GGGSRVVKTSLHKTHNAIQTRSVIYLAGLELRSQYNGNNLTEDFQVITVGAAGRAQVRVL 586 Query: 208 -QNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQL 266 + PV ++ +H G L + ++G EY +G + + ++ Sbjct: 587 HWERGQPVDIVNDQLRYSFDNHLGSALIELDSDGDIISQEEYYPFGGTAVLASRNTVEAK 646 Query: 267 I---RLPGQQYDEESGLYYNRHRYYDPLQGRYITQDPIGLKGGWNFYQYP-LNPVQYIDS 322 R G++ D +GLYY +RYY P GR+++ DP G G N Y+ NPV +D Sbjct: 647 YKTVRYSGKERDA-TGLYYYGYRYYQPWLGRWLSADPAGTIDGLNLYRMVRNNPVGLMDG 705 Query: 323 MGLASKYGHLNNGGYGARPNKPPTPDPSK 351 GL + + A+ N + Sbjct: 706 DGLMTDKLLAKHEANFAKKNISSMAELKS 734 Score = 46.7 bits (109), Expect = 0.002, Method: Composition-based stats. Identities = 25/181 (13%), Positives = 52/181 (28%), Gaps = 11/181 (6%) Query: 27 TDLIPEGVIRTDDERTHRYHYDSQ-HRLVHYTRTQYA-----EPLVESRYLYDPLGRRVA 80 + + + + Y Y+ Q RL+ T+ A L + RY YDP+G +A Sbjct: 308 SAAGQKLREESGNGVITEYRYEPQTQRLIGIKTTRPAKKDRPTRLQDLRYDYDPVGNILA 367 Query: 81 KRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETA 140 + + T + + T Y +D R Q L + + Sbjct: 368 ---IHNDAEATRFYRNQKIVPETTYRYDALYQLIEATGREADTNGIQNSQLPALASLNDS 424 Query: 141 TG--ELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSEESRRWLA 198 ++ A L + + + + + ++ A Sbjct: 425 NQFVNYTRSYHYDRAGNLLKIQHTGASQYSTHITVSDSSNHGIQQQEGITARDIRSQFDA 484 Query: 199 S 199 + Sbjct: 485 A 485 Score = 42.5 bits (98), Expect = 0.032, Method: Composition-based stats. Identities = 26/212 (12%), Positives = 57/212 (26%), Gaps = 28/212 (13%) Query: 18 DRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRT--QYAEPLVESRYLYDPL 75 D G+L +TD R Y+ +L+ T AE ++ Y Sbjct: 260 DALGQLLTQTDAK---------GHIQRMAYNRAGQLIGSWLTIKNSAEQVILRSLTYSAA 310 Query: 76 GRRVAKRVWRRERDLTGWMSLSRK---PQVTWYGWDGDRLTTIQNDRTRIQTIYQPGSFT 132 G+++ + + +++ + T R Y Sbjct: 311 GQKLREESGNGVITEYRYEPQTQRLIGIKTT-------RPAKKDRPTRLQDLRYDYDPVG 363 Query: 133 PLIRVETATGELAKT-------QRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEIL 185 ++ + + D L Q G + L L S Sbjct: 364 NILAIHNDAEATRFYRNQKIVPETTYRYDALYQLIEATGREADTNGIQNSQLPALASLND 423 Query: 186 ADRVSEESRRWLASCGLTVEQMQNQMDPVYTP 217 +++ +R + + ++Q+ Y+ Sbjct: 424 SNQFVNYTRSYHYDRAGNLLKIQHTGASQYST 455 >UniRef50_A8A655 Rhs family protein n=14 Tax=Enterobacteriaceae RepID=A8A655_ECOHS Length = 314 Score = 188 bits (477), Expect = 4e-46, Method: Composition-based stats. Identities = 141/182 (77%), Positives = 152/182 (83%) Query: 175 QMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLA 234 QMLDRLESEILADRVSEESRRWLASCGLTVEQM+NQMDPVYTPARKIHLYHCDHRGLPLA Sbjct: 2 QMLDRLESEILADRVSEESRRWLASCGLTVEQMKNQMDPVYTPARKIHLYHCDHRGLPLA 61 Query: 235 LVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEESGLYYNRHRYYDPLQGR 294 L+STEGAT WCAEYDEWGNLL++ENPH LQQLIRLPGQQYDEESGLYYNRHRYYDPLQGR Sbjct: 62 LISTEGATAWCAEYDEWGNLLSDENPHHLQQLIRLPGQQYDEESGLYYNRHRYYDPLQGR 121 Query: 295 YITQDPIGLKGGWNFYQYPLNPVQYIDSMGLASKYGHLNNGGYGARPNKPPTPDPSKLPD 354 YITQDPIGLKGGWNFYQYPLNPV +D GL + + + ++ P + Sbjct: 122 YITQDPIGLKGGWNFYQYPLNPVINVDPQGLVDINLYPESDLIHSVADEINIPGVFTIGG 181 Query: 355 IA 356 Sbjct: 182 HG 183 >UniRef50_A9GRU0 Rhs family protein n=2 Tax=Sorangium cellulosum 'So ce 56' RepID=A9GRU0_SORC5 Length = 2238 Score = 188 bits (476), Expect = 5e-46, Method: Composition-based stats. Identities = 70/336 (20%), Positives = 100/336 (29%), Gaps = 38/336 (11%) Query: 8 ARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYT--RTQYAEPL 65 Y +D LT +TD + + T R+ YDS HRL + A Sbjct: 1611 GEVQDLDYGFDDLLNLTGRTDALQ------PENTTERFRYDSLHRLTCAYFGDIESATAP 1664 Query: 66 VESRYLYDPLGRRVAKRVWRR-ERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQT 124 RY Y P G K D + D T + T ++ Sbjct: 1665 CALRYDYHPNGNLTFKSDVGDLSYDDPLHPHAITGAGTDTFAHDAVGNQTARPGGTTVRY 1724 Query: 125 IYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEI 184 F R+ T +++ + D E Sbjct: 1725 T----PFDLPERI-TQGASTITFGYDGDQQRIRK--------TTLEKETLYFGDLYERVT 1771 Query: 185 LADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEW 244 A + E R + S V + A H DH G AL +G Sbjct: 1772 EAASGAVEHRYHVHSPERVVAIVTRGG-----SAGGTRYVHVDHLGSIDALTDEDGDVIE 1826 Query: 245 CAEYDEWGNLLNEENPHQLQQLI------RLPGQQYDEESGLYYNRHRYYDPLQGRYITQ 298 YD +G N + G + D+E GL + R YDP GR++T Sbjct: 1827 RRSYDPFGQRRNPVWGERPPASFPSETTQGFTGHESDDELGLVNMKGRIYDPRIGRFLTT 1886 Query: 299 DPI----GLKGGWNFYQYPLN-PVQYIDSMGLASKY 329 DPI WN Y Y N P+ ++D G + Sbjct: 1887 DPIVSIPSSGQSWNPYSYVRNSPLNHVDPSGFQEEP 1922 Score = 53.7 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 36/285 (12%), Positives = 70/285 (24%), Gaps = 37/285 (12%) Query: 16 RYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYLYDPL 75 YD G + + RY YD+ R V +T A YD L Sbjct: 1294 GYDALGEHIARRSVPVREDTPESAILYDRYEYDAAGREVRHTTPWNAVTTT----AYDGL 1349 Query: 76 GRRVAK-----RVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQPGS 130 RV V ++ +T Y + L D T + Sbjct: 1350 QVRVTDPLDHVTVTEQDPLGRIKTITDAADGITRYAYGPFGLLHTVTDPGEAVTRTTRDA 1409 Query: 131 FTPLIRVETATGELAKTQRRSLA--------------------DTLQQSGGEDGGSVVFP 170 F + +++ + + +DG + Sbjct: 1410 FGRVRQLDDPDRGTTVSIHDGFGELISSTDALERKVAWAYDALGRPRSRVDQDGTERLTT 1469 Query: 171 PVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRG 230 ++ + + + + + ++ + ++D +P Y D G Sbjct: 1470 TWTWDTAAHGVGKLHSLASPDGEKTYGYTGRGQLDTIALRLDGERSPLEARLGY--DDLG 1527 Query: 231 LPLALVSTEGA-----TEWCAEYDEWGNLLNEENPHQLQQLIRLP 270 + A D G++L + RL Sbjct: 1528 RVETVAYPAPAGAAPFVVAQDR-DAHGHVLAVRDSGTNLAYWRLT 1571 Score = 47.1 bits (110), Expect = 0.001, Method: Composition-based stats. Identities = 33/243 (13%), Positives = 62/243 (25%), Gaps = 31/243 (12%) Query: 7 IARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYH-YDSQHRLVHYTRTQYAEPL 65 I + +D G T + T RY +D R+ Sbjct: 1697 ITGAGTDTFAHDAVGNQTAR-----------PGGTTVRYTPFDLPERITQ--------GA 1737 Query: 66 VESRYLYDPLGRRVAKRVWRRERDLTGW-----MSLSRKPQVTWYGWDG--DRLTTIQND 118 + YD +R+ K +E G + Y + + Sbjct: 1738 STITFGYDGDQQRIRKTTLEKETLYFGDLYERVTEAASGAVEHRYHVHSPERVVAIVTRG 1797 Query: 119 RTRIQTIYQP-GSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQML 177 + T Y + + G++ + + + + FP Q Sbjct: 1798 GSAGGTRYVHVDHLGSIDALTDEDGDVIERRSYDPFGQRRNPVWGERPPASFPSETTQGF 1857 Query: 178 DRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVS 237 ES+ V+ + R + G + P + + Y + PL V Sbjct: 1858 TGHESDDELGLVNMKGRIYDPRIGRFLTTDPIVSIPSSGQSWNPYSYVRN---SPLNHVD 1914 Query: 238 TEG 240 G Sbjct: 1915 PSG 1917 Score = 45.2 bits (105), Expect = 0.005, Method: Composition-based stats. Identities = 45/297 (15%), Positives = 66/297 (22%), Gaps = 40/297 (13%) Query: 13 YLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHR-------------LVHYTRT 59 Y D G +T T G RT +D Q LV Sbjct: 1136 LTYARDDFGNITGVTAEDAFGHKRTSST-----DFDEQGMFPEKHVNAAGHATLVELDDA 1190 Query: 60 ------QYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLT 113 + + + + +D GR R D T + + D R+ Sbjct: 1191 LGVLLKRVDPNQLVTTWAHDGFGRL----GVERRPDGTTTTVTLTRSKEGAPAQDAWRVR 1246 Query: 114 TIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGED------GGSV 167 + S IR E + A + Q G D Sbjct: 1247 QRSTRSGGADDTVEFDSLGRPIRWLGYGPEPQPSDGSGDATRIMQEIGYDALGEHIARRS 1306 Query: 168 VFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCD 227 V L D E R +T V P + + D Sbjct: 1307 VPVREDTPESAILYDRYEYDAAGREVRHTTPWNAVTTTAYDGLQVRVTDPLDHVTVTEQD 1366 Query: 228 HRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQL-----IRLPGQQYDEESG 279 G + Y +G L +P + Q D + G Sbjct: 1367 PLGRIKTITDAADGIT-RYAYGPFGLLHTVTDPGEAVTRTTRDAFGRVRQLDDPDRG 1422 >UniRef50_D0HCV2 Rhs protein n=3 Tax=Vibrio mimicus VM223 RepID=D0HCV2_VIBMI Length = 1617 Score = 188 bits (476), Expect = 6e-46, Method: Composition-based stats. Identities = 86/437 (19%), Positives = 143/437 (32%), Gaps = 40/437 (9%) Query: 6 RIARDAH--YLYRYDRHGRLTEKTDLIPEGVIRTDDERTH------RYHYDSQHRLVHYT 57 ++ R+ Y+YD RL D + + + +DSQ+R VH Sbjct: 1140 QLGRNGDSLRQYQYDALDRLVGIDDAKRGNSRFSLNANGQVQAERLQKGWDSQYRFVHLF 1199 Query: 58 RTQYAEPLVESRYL--Y-DPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTT 114 L + + Y D V+ R +R + R + + D+ Sbjct: 1200 GYDSELNLNQQGFATEYGDSDSNVVSLDDARVKRQSRQYDKAGRVLDTGRFRYHYDKCGR 1259 Query: 115 I------QNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVV 168 + ++ T + L +E G + + L + + Sbjct: 1260 VVEKTEYKDGFRPKTTRFVWNGDDRLTHIELPDGGRYRYRYDPLGRRVAKECLSTQRITE 1319 Query: 169 FPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDH 228 + ++ S+ AD + +L Q A ++H DH Sbjct: 1320 YLWDGANIVQH--SQKTADGSVIQEIEYLYEPESFRPLAQVTHK--ANQASQLHYIVTDH 1375 Query: 229 RGLPLALVSTEGATEWCAEYDEWG-----------NLLNEENPHQLQQLIRLPGQQYDEE 277 G P L S G W E WG + + +L +R GQ D E Sbjct: 1376 AGTPQELCSENGEVVWQGEQALWGHYQQRNTFPNHGIREHAHNDELYCDLRYQGQIEDRE 1435 Query: 278 SGLYYNRHRYYDPLQGRYITQDPIGLKGGWNFYQYPLNPVQYIDSMGLASKYGHLNNGGY 337 SGLYYN +RYYD G+Y++QDPIG GG Y NP++++D +GLA +G Sbjct: 1436 SGLYYNVNRYYDADSGQYLSQDPIGFSGGLRPQAYVFNPLEWVDPLGLAP------SGCK 1489 Query: 338 GARPNKPPTPDPSKLPDIAKQLRLPYPIDQASSAPNVFKTFFRALSPYDYTLYCRKWVKP 397 A + S + + + + K A+ + + P Sbjct: 1490 DASGRPLSSSQYSVVYEAKIDDKYYPGRSDKVHFQDANKKLHEAMLADSSFAKSMEDMYP 1549 Query: 398 NLTC--TPQDDSQYPGM 412 +T P YP Sbjct: 1550 GITEGVKPGPRGAYPRR 1566 Score = 77.9 bits (190), Expect = 7e-13, Method: Composition-based stats. Identities = 43/315 (13%), Positives = 89/315 (28%), Gaps = 39/315 (12%) Query: 1 MWPDNRI-----ARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDD------------ERTH 43 +W ++ + A Y YD G +T + + Sbjct: 729 VWQNDLLISQENALGETVQYSYDEWGNVTRAIEPNGAEHAYDYNEQGWLLCYTNPMGAVW 788 Query: 44 RYHYDSQHRLVHYTRTQYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQV- 102 Y Y+ + T + +++ Y+ G+R + + +V Sbjct: 789 SYEYNKFGDVTAITDPE----ARQTQITYNEFGQRATVTGPDGSTTHYSYYNNGLLARVE 844 Query: 103 --------TWYGWDGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLAD 154 +Y G + + +++ + +Y+ S P RV+ G A + + Sbjct: 845 PPVGYGMDLFYDKQGRLIKRVTDNKQVREWVYEKNSKQP-CRVQYEDGTHAHFEYDIEGN 903 Query: 155 TLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRV-SEESRRWLASCGLTVEQMQNQMDP 213 + + ++ ++ A + ++ D Sbjct: 904 LTKATDALGNSQHFNYGPFDKLSKVVDPLGAATHYHYNAEAEFAGVTNRHGQKWYYDFDK 963 Query: 214 VYTPARKIHL------YHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLI 267 A + H Y D G + +G + C YD G LL +Q + Sbjct: 964 GGRVAAEHHYDARVDHYQYDAAGRLNRHIKPDG-VQHCHSYDPSGKLLETVTLDHNEQPL 1022 Query: 268 RLPGQQYDEESGLYY 282 +YD S L Y Sbjct: 1023 GKAWYEYDAASRLTY 1037 Score = 54.4 bits (129), Expect = 9e-06, Method: Composition-based stats. Identities = 39/273 (14%), Positives = 71/273 (26%), Gaps = 65/273 (23%) Query: 17 YDRHGRLTEKT-------------DLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAE 63 YD+ GRL ++ + ++ +D + YD + L T Sbjct: 855 YDKQGRLIKRVTDNKQVREWVYEKNSKQPCRVQYEDGTHAHFEYDIEGNLTKATDALGNS 914 Query: 64 PLVESRYLY----------DPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWD-GDRL 112 + Y DPLG A + + +R Q +Y +D G R+ Sbjct: 915 ----QHFNYGPFDKLSKVVDPLG---AATHYHYNAEAEFAGVTNRHGQKWYYDFDKGGRV 967 Query: 113 TTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPV 172 + R+ YQ + L R G L+ + + Sbjct: 968 AAEHHYDARVDH-YQYDAAGRLNRHIKPDGVQHCHSYDPSGKLLETVTLDHNEQPL---G 1023 Query: 173 LVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLP 232 S + + ++ S + + + G P Sbjct: 1024 KAWYEYDAASRLTYTENGDAWVSFVYSQSGLLLEE-------------------NLNGTP 1064 Query: 233 LALVSTEGATEWCAEYDEWGNLLNEENPHQLQQ 265 + EYDE G + +Q Sbjct: 1065 IV-----------HEYDEHGRRIGSSGSKTARQ 1086 Score = 53.3 bits (126), Expect = 2e-05, Method: Composition-based stats. Identities = 44/416 (10%), Positives = 94/416 (22%), Gaps = 62/416 (14%) Query: 39 DERTHRYHYDSQH---RLVHYTRTQYAEPLVESRYLYDPL---------GRRVAKRVWRR 86 + + + Y + RL ++++YD GR + R Sbjct: 547 NGLEYHFEY-AVGTTLRLTKQQDAYGN----ATQFVYDRGCLKWVVLCDGRLIQVETQRN 601 Query: 87 ERDLTGWMSLSRKPQV--TWYGWDGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGEL 144 + P V Y +D YQ L R + Sbjct: 602 RIQTLTLCEADKTPTVVLARYSYDNSGFLQSVRADAGRNFDYQYSKEGYLTRWNDLSQTW 661 Query: 145 AKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTV 204 + T+ + + D L + Sbjct: 662 VEHDYDEKGRTIATRCSGG-----YWDDGITYDDENHIHYYHTAFGGTQVLHLDDQNRPL 716 Query: 205 EQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQ 264 + + +P + + D ++ + G T YDEWGN+ P+ + Sbjct: 717 QMVDEFGNPTKSVWQ------NDLL---ISQENALGETV-QYSYDEWGNVTRAIEPNGAE 766 Query: 265 QLIRLPGQQYDEESGLYYNRHRYYDPLQGRYITQDPIGLKGGWNFYQYP--LNPVQYIDS 322 Q + L Y +P+ + Y+Y + D Sbjct: 767 HAYDYNEQGWL----LCYT-----NPMGAVW-------------SYEYNKFGDVTAITDP 804 Query: 323 MGLASKYGHLNNGGYGARPNKPPTPDPSKLPDIAKQLRLPYPI--DQASSAPNVFKTFFR 380 ++ + G + + R+ P+ + R Sbjct: 805 EARQTQITYNEFGQRATVTGPDGSTTHYSYYNNGLLARVEPPVGYGMDLFYDKQGRLIKR 864 Query: 381 ALSPYDYTLYCRKWVKPNLTCTPQDDSQYPGMDTKTASDYLPQTNW--PTTQLPPG 434 + + +D + + + T+ + G Sbjct: 865 VTDNKQVREWVYEKNSKQPCRVQYEDGTHAHFEYDIEGNLTKATDALGNSQHFNYG 920 Score = 49.4 bits (116), Expect = 3e-04, Method: Composition-based stats. Identities = 45/291 (15%), Positives = 69/291 (23%), Gaps = 45/291 (15%) Query: 6 RIARDAH-----YLYRYDR---------HGRLTEKTDLIPE-------GVIRTDDERTHR 44 R+ + + YDR GRL + +T R Sbjct: 562 RLTKQQDAYGNATQFVYDRGCLKWVVLCDGRLIQVETQRNRIQTLTLCEADKTPTVVLAR 621 Query: 45 YHYDSQHRLVHYTRTQYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTW 104 Y YD+ L A+ Y Y +E LT W LS+ Sbjct: 622 YSYDNSGFLQSVR----ADAGRNFDYQY------------SKEGYLTRWNDLSQTWVEHD 665 Query: 105 YGWDGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGG-ED 163 Y G R + + TA G LQ + Sbjct: 666 YDEKG-RTIATRCSGGYWDDGITYDDENHIHYYHTAFGGTQVLHLDDQNRPLQMVDEFGN 724 Query: 164 GGSVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVY-----TPA 218 V+ L+ + E + E A E + + + P Sbjct: 725 PTKSVWQNDLLISQENALGETVQYSYDEWGNVTRAIEPNGAEHAYDYNEQGWLLCYTNPM 784 Query: 219 RKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRL 269 + Y + G A+ E Y+E+G P Sbjct: 785 GAVWSYEYNKFGDVTAITDPEARQT-QITYNEFGQRATVTGPDGSTTHYSY 834 Score = 46.0 bits (107), Expect = 0.003, Method: Composition-based stats. Identities = 41/322 (12%), Positives = 76/322 (23%), Gaps = 71/322 (22%) Query: 6 RIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHR--------Y-----HYDSQHR 52 R ++ Y+Y + G LT DL V DE+ Y YD ++ Sbjct: 634 RADAGRNFDYQYSKEGYLTRWNDLSQTWVEHDYDEKGRTIATRCSGGYWDDGITYDDENH 693 Query: 53 L---------VHYTRTQYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVT 103 + ++ D G K VW+ + ++ + + Sbjct: 694 IHYYHTAFGGTQVLHLDDQNRPLQMV---DEFGNPT-KSVWQNDLLISQE---NALGETV 746 Query: 104 WYGWDGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLAD--------- 154 Y +D T + + Y L+ G + + D Sbjct: 747 QYSYDEWGNVTRAIEPNGAEHAYDYNEQGWLLCYTNPMGAVWSYEYNKFGDVTAITDPEA 806 Query: 155 -----------TLQQSGGEDGGSVVFPPVLVQMLDRLESEILAD---------------R 188 G DG + + +L R+E + Sbjct: 807 RQTQITYNEFGQRATVTGPDGSTTHYSYYNNGLLARVEPPVGYGMDLFYDKQGRLIKRVT 866 Query: 189 VSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWCAEY 248 +++ R W+ D + + D G G Y Sbjct: 867 DNKQVREWVYEKNSKQPCRVQYEDGTHA------HFEYDIEGNLTKATDALGN-SQHFNY 919 Query: 249 DEWGNLLNEENPHQLQQLIRLP 270 + L +P Sbjct: 920 GPFDKLSKVVDPLGAATHYHYN 941 >UniRef50_Q2SKC0 Rhs family protein n=8 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SKC0_HAHCH Length = 3976 Score = 188 bits (476), Expect = 6e-46, Method: Composition-based stats. Identities = 74/353 (20%), Positives = 118/353 (33%), Gaps = 48/353 (13%) Query: 4 DNR----IARDAHYLYRYDRHGRLTEKTDLIPEGVIRTD------------------DER 41 NR A Y YD RLT +T + D + R Sbjct: 3317 GNRESVTQANGQTTAYVYDALNRLTRQTTADEADNVIADYRYTLHSTGRREQIEELHNGR 3376 Query: 42 THRYHYDSQHRLVHYTRTQYAEPLVESRYLYDPLGRRVAKRVWRRERDLTG--WMSLSRK 99 Y YD+ +RL H + + Y +D +G R + + L+++ Sbjct: 3377 VSTYTYDALYRLTHDAISDPVNGDYSAEYRFDNVGNRTYSIIDGVHTAYSYDDNDRLTQQ 3436 Query: 100 PQVTWYGWDGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQS 159 VT Y +D + T + + + Y + L+ V T T D ++ Sbjct: 3437 GGVT-YAYDANGNTLTETEDGLVTARYTYSAKNKLLAV---TKAGETTSFGYNPDGIRTW 3492 Query: 160 GGEDGGSVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPAR 219 G + F + ++ E++ ++ L A Sbjct: 3493 KAASGATTDFIVDQNRDYAQVLQEVV---NGANQVSYVYGDDLL----------SQARAG 3539 Query: 220 KIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEESG 279 + Y D +G +L + G YD +G LL+ E G+QYD Sbjct: 3540 DVSYYVYDGQGSVRSLTNQTGVQTDNYHYDAFGILLHSEG--DTPNSYLYTGEQYDASLD 3597 Query: 280 LYYNRHRYYDPLQGRYITQDP-IGLKG---GWNFYQYPL-NPVQYIDSMGLAS 327 YY R RYYD QGR+ D +GL + Y Y +P+ Y+D G S Sbjct: 3598 QYYLRARYYDQNQGRFTQMDTWMGLNSDPVTLHKYLYANADPISYVDPTGNFS 3650 Score = 102 bits (254), Expect = 3e-20, Method: Composition-based stats. Identities = 43/286 (15%), Positives = 79/286 (27%), Gaps = 38/286 (13%) Query: 9 RDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDER-----------THRYHYDSQHRLVHYT 57 Y YD + +++ E T + T Y YD+ +RLV + Sbjct: 3198 NGQTTAYTYDVNDQVSRIDYADGEVETFTYNAIGARLTATNSLGTTSYQYDALNRLVEES 3257 Query: 58 RTQYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQN 117 + A Y YD G + + V K + T Y +D + Sbjct: 3258 QPNGA----VLSYSYDKAGNKTSATVT-----------YQGKTETTTYLYDTLNRLSKVI 3302 Query: 118 DRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQML 177 D +T+Y + V A G+ +L +Q+ ++ +V+ Sbjct: 3303 DPQGGETLYAYDAVGNRESVTQANGQTTAYVYDALNRLTRQTTADEADNVIADYRYTLHS 3362 Query: 178 DRLESEILADRVSEE-SRRWLASCGLTVEQMQNQMDPVYTPA------RKIHLYHCDHRG 230 +I + + A LT + + + ++ Y+ D Sbjct: 3363 TGRREQIEELHNGRVSTYTYDALYRLTHDAISDPVNGDYSAEYRFDNVGNRTYSIIDGVH 3422 Query: 231 LPLALVSTEGATEWC----AEYDEWGNLLNEENPHQLQQLIRLPGQ 272 YD GN L E + + Sbjct: 3423 TA-YSYDDNDRLTQQGGVTYAYDANGNTLTETEDGLVTARYTYSAK 3467 Score = 92.9 bits (229), Expect = 2e-17, Method: Composition-based stats. Identities = 73/477 (15%), Positives = 124/477 (25%), Gaps = 60/477 (12%) Query: 7 IARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDD------------ERTHRYHYDSQHRLV 54 + D Y YD R+ E D R Y YD RL+ Sbjct: 2902 VKVDETTRYVYDARNRVIETQYADGSSTQTEYDLAGNQIVTIDMQGRRTDYEYDVYGRLL 2961 Query: 55 HYTRTQYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQV-------TWYGW 107 T YD G + + + L+R + + + Sbjct: 2962 ATTYPDGTSESK----TYDVEGNVLTETDRLGRVTGFTYDKLNRVVRTELADGSFSSVTY 3017 Query: 108 DGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSV 167 D + D T Y+ + V A + + + + ++ + Sbjct: 3018 DAAGQVESETDSKGNVTHYEYDAAGRRTAVINALNQRHSFVYDADGNLISETDANGHTTT 3077 Query: 168 VFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCD 227 +L Q + L + S + A A ++ Y D Sbjct: 3078 YEYNILDQRVKTLFHD-----GSSLQETFDALGRRL---------SSIDQAGRVTQYAYD 3123 Query: 228 HRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRL--PGQQYDEESGLYYNRH 285 G +A+ YD+ GN L +++ G+ + Sbjct: 3124 KLGRLIAVTDALNNVT-SFTYDQAGNKLTQKDAEGRTTRWTYDAMGRVLTRTLPMGQMES 3182 Query: 286 RYYDPLQGRYITQDPIGLKGGWNFYQY-PLNPVQYIDS-MGLASKYGHLNNGGYGARPNK 343 YD + GR ++ G Y Y + V ID G + + G N Sbjct: 3183 FSYD-IAGRLLSH--TDFNGQTTAYTYDVNDQVSRIDYADGEVETFTYNAIGARLTATN- 3238 Query: 344 PPTPDPSKLPDIAKQLRLPYPIDQASSAPNVFKTFFRALSPYDYTLYCRKWVKPNLTCTP 403 S D +L + A + + K + + Y K T Sbjct: 3239 -SLGTTSYQYDALNRLVEESQPNGAVLSYSYDKAGNKTSATVTYQ------GKTETTTYL 3291 Query: 404 QDDSQYPGMDTK-----TASDYLPQTNWPTTQLPPGYTCAEPYLFPDINKPDGPATA 455 D T Y N + G T A Y++ +N+ TA Sbjct: 3292 YDTLNRLSKVIDPQGGETLYAYDAVGNRESVTQANGQTTA--YVYDALNRLTRQTTA 3346 Score = 87.9 bits (216), Expect = 7e-16, Method: Composition-based stats. Identities = 48/324 (14%), Positives = 87/324 (26%), Gaps = 50/324 (15%) Query: 3 PDNRIA----RDAHYLYRYDRHGRLTEKTDLIPEGVIRTDD------------ERTHRYH 46 N+I + Y YD +GRL T +T D R + Sbjct: 2936 AGNQIVTIDMQGRRTDYEYDVYGRLLATTYPDGTSESKTYDVEGNVLTETDRLGRVTGFT 2995 Query: 47 YDSQHRLVHYTRTQYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRK------- 99 YD +R+V + V YD G+ ++ + + + R+ Sbjct: 2996 YDKLNRVVRTELADGSFSSV----TYDAAGQVESETDSKGNVTHYEYDAAGRRTAVINAL 3051 Query: 100 PQVTWYGWDGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQS 159 Q + +D D + D T Y+ ++ G + +L L Sbjct: 3052 NQRHSFVYDADGNLISETDANGHTTTYEYNILDQRVKTLFHDGSSLQETFDALGRRLSSI 3111 Query: 160 GGEDGGSVVFPPVLVQML--------------DRLESEILADRVSEESRRWLASCGLTVE 205 + L +++ D+ +++ + RW V Sbjct: 3112 DQAGRVTQYAYDKLGRLIAVTDALNNVTSFTYDQAGNKLTQKDAEGRTTRWTYDAMGRVL 3171 Query: 206 QMQNQMDPVYTPARKI---HLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEE---- 258 M + + + I L H D G A +Y G + Sbjct: 3172 TRTLPMGQMESFSYDIAGRLLSHTDFNGQTTAYTYDVNDQVSRIDY-ADGEVETFTYNAI 3230 Query: 259 -NPHQLQQLIRLPGQQYDEESGLY 281 + QYD + L Sbjct: 3231 GARLTATNSLGTTSYQYDALNRLV 3254 Score = 85.6 bits (210), Expect = 3e-15, Method: Composition-based stats. Identities = 45/338 (13%), Positives = 82/338 (24%), Gaps = 89/338 (26%) Query: 3 PDNRIARD----AHYLYRYDRHGRLTEKTDLIPEGVIRTDD------------------- 39 R A + + YD G L +TD + Sbjct: 3041 AGRRTAVINALNQRHSFVYDADGNLISETDANGHTTTYEYNILDQRVKTLFHDGSSLQET 3100 Query: 40 --------------ERTHRYHYDSQHRLVHYTRTQYAEPLVESRYLYDPLGRRVAKRVWR 85 R +Y YD RL+ T + + YD G ++ ++ Sbjct: 3101 FDALGRRLSSIDQAGRVTQYAYDKLGRLIAVTDALNN----VTSFTYDQAGNKLTQK--- 3153 Query: 86 RERDLTGWMSLSRKPQVTWYGWDGDRLTTIQ---------------------NDRTRIQT 124 + + T + +D + D T Sbjct: 3154 -----------DAEGRTTRWTYDAMGRVLTRTLPMGQMESFSYDIAGRLLSHTDFNGQTT 3202 Query: 125 IYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQ----MLDRL 180 Y + R++ A GE+ ++ L + S + + + Sbjct: 3203 AYTYDVNDQVSRIDYADGEVETFTYNAIGARLTATNSLGTTSYQYDALNRLVEESQPNGA 3262 Query: 181 ESEILADRVSEESRRWLASCGLTVEQMQ-----NQMDPVYTPARKIHLYHCDHRGLPLAL 235 D+ ++ + G T N++ V P LY D G ++ Sbjct: 3263 VLSYSYDKAGNKTSATVTYQGKTETTTYLYDTLNRLSKVIDPQGGETLYAYDAVGNRESV 3322 Query: 236 VSTEGATEWCAEYDEWGNLLNEENPHQLQQ---LIRLP 270 G T YD L + + R Sbjct: 3323 TQANGQTTA-YVYDALNRLTRQTTADEADNVIADYRYT 3359 Score = 69.1 bits (167), Expect = 4e-10, Method: Composition-based stats. Identities = 71/471 (15%), Positives = 112/471 (23%), Gaps = 97/471 (20%) Query: 13 YLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYLY 72 + D GR+ TD + Y YD L T A ++ Y Y Sbjct: 2627 VRFTRDSQGRIVSMTD---------PNGSELTYTYDFNGDLEVSTDPMAA----QTSYTY 2673 Query: 73 ----------------------DPLGRRVAKRVWRRERDLTGWM-------SLSRKPQVT 103 D GR +A+ R R T Sbjct: 2674 NRSHGLLDIIDPLGRTIVKNIYDDAGRLMAQEDSEGHRTEFDHDIEGRQSVVTDRNGNTT 2733 Query: 104 WYGWDGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGED 163 + +D T + D Y + G ++ + L Q+ Sbjct: 2734 FLYYDDRGNVTSKVDAEGHTWSYAYDDHGNQLSETNPLGYVSSATFDERNNQLTQTDELG 2793 Query: 164 GGSVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHL 223 + Q L ++ A +S L S + + K Sbjct: 2794 NTASFTYNTRGQELTITDASGDAFTNVYDSIGNLLSVTDPLGNVAENTLNRDGLVEKT-- 2851 Query: 224 YHCDHRGL-PLALVSTEGATEWC---------AEYDEWGNLLNEENPHQLQQLIRLPGQQ 273 D G +G YD+ GN+L+E + G + Sbjct: 2852 --KDALGNETQYTYDKDGNKLTEVNALEQRTIYTYDDNGNVLSETRKRTVD------GVK 2903 Query: 274 YDEESGLYYNRHRY-YDPLQGRYITQDPIGLKGGWNF---YQYPLNPVQYIDSMGLASKY 329 DE + RY YD TQ G + Y N + ID G + Y Sbjct: 2904 VDETT-------RYVYDARNRVIETQ----YADGSSTQTEYDLAGNQIVTIDMQGRRTDY 2952 Query: 330 GHLNNGGYGARPNKPPTPDPSKLPDIAKQLRLPYPIDQASSAPNVFKTFFRALSPYDYTL 389 + G A T + L ++ + Y Sbjct: 2953 EYDVYGRLLATTYPDGTSESKTYDVEGNVLTET--------------DRLGRVTGFTYDK 2998 Query: 390 YCRKWVKPNLTCTPQDDSQYPGMDTKTASDYLPQTNWPTTQLPPGYTCAEP 440 R + T D + + A +T+ Y A Sbjct: 2999 LNR------VVRTELADGSFSSVTYDAAGQVESETDSKGNVTHYEYDAAGR 3043 Score = 66.0 bits (159), Expect = 3e-09, Method: Composition-based stats. Identities = 43/274 (15%), Positives = 73/274 (26%), Gaps = 38/274 (13%) Query: 8 ARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDER------------THRYHYDSQHRLVH 55 A + Y YD HG +T+ + T DER T + Y+++ + Sbjct: 2749 AEGHTWSYAYDDHGNQLSETNPLGYVSSATFDERNNQLTQTDELGNTASFTYNTRGQ--E 2806 Query: 56 YTRTQYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTI 115 T T + + +YD +G ++ V + D L Sbjct: 2807 LTITDASGDAFTN--VYDSIGNLLSVTDP--------------LGNVAENTLNRDGLVEK 2850 Query: 116 QNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQ 175 D +T Y + A + + L ++ V Sbjct: 2851 TKDALGNETQYTYDKDGNKLTEVNALEQRTIYTYDDNGNVLSETRKRTVDGVKVDETTRY 2910 Query: 176 MLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLAL 235 + D I S + + + Y D G LA Sbjct: 2911 VYDARNRVIETQYADGSSTQTEYD-------LAGNQIVTIDMQGRRTDYEYDVYGRLLAT 2963 Query: 236 VSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRL 269 +G +E YD GN+L E + Sbjct: 2964 TYPDGTSESK-TYDVEGNVLTETDRLGRVTGFTY 2996 Score = 61.4 bits (147), Expect = 8e-08, Method: Composition-based stats. Identities = 50/375 (13%), Positives = 89/375 (23%), Gaps = 30/375 (8%) Query: 85 RRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGEL 144 T + + D D + Y L Sbjct: 2609 GHTLTYTNDGIFHSSGKAVRFTRDSQGRIVSMTDPNGSELTYTYDFNGDLEVSTDPMAAQ 2668 Query: 145 AKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTV 204 L +V+ + ++A SE R Sbjct: 2669 TSYTYNRSHGLLDIID-------PLGRTIVKNIYDDAGRLMAQEDSEGHRT------EFD 2715 Query: 205 EQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQ 264 ++ + V + D RG + V EG W YD+ GN L+E NP Sbjct: 2716 HDIEGRQSVVTDRNGNTTFLYYDDRGNVTSKVDAEGH-TWSYAYDDHGNQLSETNPLGYV 2774 Query: 265 QLIRL-PGQQYDEESGLYYNRHRY-YDPLQGRYITQDPIGLKGGWNFYQYPLNPVQYIDS 322 ++ N + Y+ D G N Y N + D Sbjct: 2775 SSATFDERNNQLTQTDELGNTASFTYNTRGQELTITDASGDAFT-NVYDSIGNLLSVTDP 2833 Query: 323 MGLASKYGHLNNG---------GYGARPNKPPTPDPSKLPDIAKQLRLPYPIDQASSAPN 373 +G ++ +G G + + + +Q + D + Sbjct: 2834 LGNVAENTLNRDGLVEKTKDALGNETQYTYDKDGNKLTEVNALEQRTIYTYDDNGNVLSE 2893 Query: 374 VFKTFFRALSPYDYTLYCRKWVKPNLTCTPQDDSQYPGMDTKTASDYLPQTNWPTTQLPP 433 K + D T + + T D + A + + + + Sbjct: 2894 TRKRTVDGVKV-DETTRYVYDARNRVIETQYADGSSTQTEYDLAGNQIVTIDMQGRRTDY 2952 Query: 434 GYTCAEPYL---FPD 445 Y L +PD Sbjct: 2953 EYDVYGRLLATTYPD 2967 >UniRef50_Q7N2G0 Complete genome; segment 11/17 n=4 Tax=Gammaproteobacteria RepID=Q7N2G0_PHOLL Length = 1498 Score = 187 bits (475), Expect = 6e-46, Method: Composition-based stats. Identities = 64/345 (18%), Positives = 115/345 (33%), Gaps = 44/345 (12%) Query: 12 HYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYL 71 + Y + D + RY Y+ ++ T + +++ Sbjct: 1063 TRHWHYTPAYNVACIEDTRWD---------ETRYGYNVNDQV--VTTQFGGPRACDEQFV 1111 Query: 72 YDP---------LGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQN--DRT 120 YD + R+++ + + + Y +G R + Sbjct: 1112 YDAGQHLHYQKRVPERLSEDLRQSYHTQQAGRVIQHGACTYRYDENGRRTEKTERRWGYR 1171 Query: 121 RIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGS----------VVFP 170 Y+ + L + G + + + + D + Sbjct: 1172 PRTWRYRWDAHDRLTGFISPEGVRWRYCYDAFGRRIGKRQEVDAAGPPVKPTAIIGYDYL 1231 Query: 171 PVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRG 230 Q+++ E+S WL G + + +++ DH+G Sbjct: 1232 WSGEQLIEETPVYADGTVDYEQSIHWLYEPGALTPLARFE-------KGQLYYVVSDHQG 1284 Query: 231 LPLALVSTEGATEWCAEYDEWGN-----LLNEENPHQLQQLIRLPGQQYDEESGLYYNRH 285 +++ G W WG +L +P L R GQ D ESGL+YNRH Sbjct: 1285 TVREILTEAGELIWAGRLLTWGEPECWPVLTVNDPRNLTCNFRFAGQYEDRESGLFYNRH 1344 Query: 286 RYYDPLQGRYITQDPIGLKGGWNFYQYPLNPVQYIDSMGLASKYG 330 RYY+ G+Y++ DP+ L GG N Y Y +PV +ID GLA+ Sbjct: 1345 RYYESDTGQYLSPDPLNLSGGVNPYGYVHDPVNWIDPFGLAACPT 1389 Score = 80.2 bits (196), Expect = 1e-13, Method: Composition-based stats. Identities = 51/292 (17%), Positives = 75/292 (25%), Gaps = 42/292 (14%) Query: 18 DRHGRLTEKTDLIPEGVIRT--DDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYLYDPL 75 D GR+ E ++R D RT RY Y + +L A +R+ D L Sbjct: 690 DPQGRVEETRYGPRGEILRRVLPDGRTWRYGY-ERQQLSEIQAPDGAL----TRFDTDGL 744 Query: 76 GRRVAKRVWRRERDLTGWMSLSRKPQ------------VTWYGWDGDRLTTIQNDRTRIQ 123 GR + ++ P +D +R + D Sbjct: 745 GRLLRVTDALHQQTHYHPSPFHANPAGSISEIGLPDGIRQTIDYDSERRVSAVTDGEGRT 804 Query: 124 TIYQPGSFTPLIRVETATGELAKTQRR-------------SLADTLQQSGGEDGGSVVFP 170 T Y +F L R+ G + G F Sbjct: 805 TRYTYDAFDRLSRLTRPDGTALTFGYDRLTRLKTVTSETGDTYHYTRDPAGRVISETDFT 864 Query: 171 PVLVQMLDRLESEILADRVSEES-RRW-LASCGLTVEQMQNQMDPVYTPARKIHLYHCDH 228 + L R RW Q Q + + Y D Sbjct: 865 GRTIHYQYDAAGRRLTARYPNHQLLRWCYTDDDRLTRQEAWQEEAEQCTLCSVTTYDHDA 924 Query: 229 RGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEESGL 280 +G + + + YDE G L E R Q+D SGL Sbjct: 925 QGRLIRATNPDAVVT--FAYDESGRLTKETING------RAVSHQWDPRSGL 968 Score = 65.6 bits (158), Expect = 4e-09, Method: Composition-based stats. Identities = 60/457 (13%), Positives = 108/457 (23%), Gaps = 56/457 (12%) Query: 8 ARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQH-----RLVHYTRTQYA 62 ++RYD H RLT + + + D H RLV Sbjct: 457 RNGNQTVFRYDEHHRLTRLVHADMTTLALHYEHQQLT-AIDWLHAGQRQRLVTCRYDNPG 515 Query: 63 EPLVESRYL-------YDPLGRRVAKRVWRRERDLTGWMSLSRKPQVT--------WYGW 107 + Y P G + + + R T + + Sbjct: 516 YLAECDTFQFHHLWHEYTPQGNMTRWHDTDKTDVTVHYDNAGRVTATTTPQGYWQDRFEY 575 Query: 108 DGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSV 167 D +R T D T Y + + R G +T+ + + Sbjct: 576 DDERRVTTYFDAEGGCTRYHYNADGLVTRQVDPLGHDTRTEWDFSHKVAETDPLGRTTAY 635 Query: 168 VFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCD 227 + P + L +E Q+ V P H Sbjct: 636 EYSPYGELTGVMSSTGDLTAYDYDE---------------YGQLTRVTQPDGARWQLHYS 680 Query: 228 HRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEESGLYYNRHRY 287 +G +++ +G Y G +L P QQ E R+ Sbjct: 681 EQGNLASVIDPQGR-VEETRYGPRGEILRRVLPDGRTWRYGYERQQLSEIQAPDGALTRF 739 Query: 288 YDPLQGRYITQDPIGLKGGWNFYQYPLNPVQYIDSMGLASKYGHLNNGGYGARPNKPPTP 347 GR + + + + H N G + P Sbjct: 740 DTDGLGRLL-----RVTDALHQQTH------------YHPSPFHANPAGSISEIGLPDGI 782 Query: 348 DPSKLPDIAKQLRLPYPIDQASSA--PNVFKTFFRALSPYDYTLYCRKWVKPNLTCTPQD 405 + D +++ + ++ + F R P L L + Sbjct: 783 RQTIDYDSERRVSAVTDGEGRTTRYTYDAFDRLSRLTRPDGTALTFGYDRLTRLKTVTSE 842 Query: 406 DSQYPGMDTKTASDYLPQTNWPTTQLPPGYTCAEPYL 442 A + +T++ + Y A L Sbjct: 843 TGDTYHYTRDPAGRVISETDFTGRTIHYQYDAAGRRL 879 Score = 55.2 bits (131), Expect = 6e-06, Method: Composition-based stats. Identities = 54/349 (15%), Positives = 86/349 (24%), Gaps = 72/349 (20%) Query: 10 DAHYLYRYDRHGRLTE--------------------KTDLIPEGVIRTDDERTHRYHYDS 49 Y+YD GR + + E + Y +D+ Sbjct: 865 GRTIHYQYDAAGRRLTARYPNHQLLRWCYTDDDRLTRQEAWQEEAEQCTLCSVTTYDHDA 924 Query: 50 QHRLVHYTRTQYAEPLVESRYLYDPLGRRVAKRVWRRERDL---------TGWMSLSRKP 100 Q RL+ T P + YD GR + + R G + Sbjct: 925 QGRLIRAT-----NPDAVVTFAYDESGRLTKETINGRAVSHQWDPRSGLPAGRQMDTLPA 979 Query: 101 QVTWYGWDGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSG 160 +YG +G + + +Q + I E+A G + + Q+ Sbjct: 980 VSWYYGLNGRLMQWQLDGHAPLQMQH--DGLGREIARESAAGFIQSQAYTPVGLLAHQTA 1037 Query: 161 GEDGGSVV---------FPPVLVQMLDRLESEILADRVSEESRRWL---ASCGLTVEQMQ 208 G FPP + + E RW + + + Sbjct: 1038 GRSSDWFKQTLYEADPHFPPRGSAVTRHWHYTPAYNVACIEDTRWDETRYGYNVNDQVVT 1097 Query: 209 NQMDPVYTPARKIHLYHCDHRG----LPLAL---------VSTEGATEWC----AEYDEW 251 Q + H +P L G YDE Sbjct: 1098 TQFGGPRACDEQFVYDAGQHLHYQKRVPERLSEDLRQSYHTQQAGRVIQHGACTYRYDEN 1157 Query: 252 GNLLNEENPHQLQQL--IRLPGQQYDEESGLY---YNRHRY-YDPLQGR 294 G + + R +D +G R RY YD GR Sbjct: 1158 GRRTEKTERRWGYRPRTWRYRWDAHDRLTGFISPEGVRWRYCYD-AFGR 1205 Score = 42.9 bits (99), Expect = 0.024, Method: Composition-based stats. Identities = 39/348 (11%), Positives = 68/348 (19%), Gaps = 100/348 (28%) Query: 13 YLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAE--------- 63 Y +D GRL T+ + YD RL T A Sbjct: 918 TTYDHDAQGRLIRATNPDA----------VVTFAYDESGRLTKETINGRAVSHQWDPRSG 967 Query: 64 ----------PLVESRY-------------------LYDPLGR----------------- 77 P V Y +D LGR Sbjct: 968 LPAGRQMDTLPAVSWYYGLNGRLMQWQLDGHAPLQMQHDGLGREIARESAAGFIQSQAYT 1027 Query: 78 ---RVAKRVWRRERDLTGWMSL----------SRKPQVTWYGWDGDRLTTIQNDRTRIQT 124 +A + R D S + Y + + Sbjct: 1028 PVGLLAHQTAGRSSDWFKQTLYEADPHFPPRGSAVTRHWHYTPAYNVACIEDTRWDETRY 1087 Query: 125 IYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEI 184 Y + + + Q + + ++ Sbjct: 1088 GYNVNDQVVTTQFGGPRACDEQFVYDAGQHLHYQKRVP-------ERLSEDLRQSYHTQQ 1140 Query: 185 LADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEW 244 + + + + + + D +S EG W Sbjct: 1141 AGRVIQHGACTYRYDENGRRTEKTERRWGYRPRTWRYRW---DAHDRLTGFISPEG-VRW 1196 Query: 245 CAEYDEWGNLLNEENPHQLQQL-----------IRLPGQQYDEESGLY 281 YD +G + + G+Q EE+ +Y Sbjct: 1197 RYCYDAFGRRIGKRQEVDAAGPPVKPTAIIGYDYLWSGEQLIEETPVY 1244 >UniRef50_B7GX39 Protein rhsD n=4 Tax=Acinetobacter baumannii RepID=B7GX39_ACIB3 Length = 1590 Score = 187 bits (475), Expect = 7e-46, Method: Composition-based stats. Identities = 81/357 (22%), Positives = 124/357 (34%), Gaps = 79/357 (22%) Query: 4 DNRIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAE 63 +N I Y+YD G +TE + + +D+Q+RL+ Sbjct: 1136 NNLIKSYKGKHYQYDVQGNVTEIIQA----------GKNLKLTWDNQNRLIRSD-----N 1180 Query: 64 PLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQ----NDR 119 + + Y YD GRR+ K+ + ++T +GWDGD + Sbjct: 1181 NGLVTEYGYDVFGRRLYKKTAK---------------ELTLFGWDGDLMIWESFKSAQTN 1225 Query: 120 TRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDR 179 IY+P SF PL++ + Sbjct: 1226 YTKHYIYEPDSFVPLLQAGYKDFIQLIETPDYQEYQTKPYSIYKD--------------- 1270 Query: 180 LESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTE 239 + T + YHCD G P + + Sbjct: 1271 -------------------------PVWNRNLGKERTALEQFTFYHCDQVGTPQTMTNIR 1305 Query: 240 GATEWCAEYDEWGNLLNEENPHQL----QQLIRLPGQQYDEESGLYYNRHRYYDPLQGRY 295 G W D WG + + +Q Q +R GQ YD E+ L+YNR+RYY+P RY Sbjct: 1306 GECVWEILQDTWGAVSQIKALNQDNPFEQNNLRFQGQYYDRETELHYNRYRYYEPHSARY 1365 Query: 296 ITQDPIGLKGGWNFYQYPLNPVQYIDSMGLASK-YGHLNNGGYGARPNKPPTPDPSK 351 +++DPIGL+GG N Y +P Q+ID GL S YG + A+ + Sbjct: 1366 VSKDPIGLEGGMNTSSYVSDPNQWIDPKGLNSFNYGEMFGIPASAQSGLAYQGQRNY 1422 Score = 63.3 bits (152), Expect = 2e-08, Method: Composition-based stats. Identities = 39/283 (13%), Positives = 77/283 (27%), Gaps = 32/283 (11%) Query: 6 RIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPL 65 R+A Y D R+T + D D R + Y+ Q +LV + Sbjct: 619 RLADGRESWYSRDGKKRITRQID---------FDGRETQQEYNDQDQLVKIVQPNGG--- 666 Query: 66 VESRYLYDPLGRRVAKRVWRRERDLTGWM-------SLSRKPQVTWYGWDGDRLTTIQND 118 R+ Y+ G V + + ++ +T Y ++ D D Sbjct: 667 -IIRFAYNKQGNLVEIKDPEGSIWKREYDENRNVSKEINPLGHITQYKYNNDNQLVEVID 725 Query: 119 RTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQ--- 175 Q +I +G+ + + + + F + Sbjct: 726 AKGGVKKIQYNELGQMISYTDCSGKSSTWEYDEDGALTAEQTANNKVVQYFYSTKGRDKG 785 Query: 176 ------MLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIH--LYHCD 227 D L+ D + +T + H Y D Sbjct: 786 QLQSIIYPDGLKEYFEHDEEGRLLKHTDTKGLVTEYKYNQVGLLEQRIDANRHSVAYQWD 845 Query: 228 HRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRLP 270 +G L++ E+ Y+ +G L+ E+ ++ Sbjct: 846 KQGRIQKLINQN-QAEYLFGYNPYGYLIREQAFDGEEKHYSYN 887 Score = 62.1 bits (149), Expect = 5e-08, Method: Composition-based stats. Identities = 41/296 (13%), Positives = 79/296 (26%), Gaps = 62/296 (20%) Query: 14 LYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYL-- 71 Y YD G L + D + T Y Y+ H+L YT RY Sbjct: 518 RYEYDTQGNLIKAIDQ---------NGHTRTYEYNQFHQLTRYTDRTG--RGQNIRYEST 566 Query: 72 -------------------------------YDPLGRRVAKRVWRRERDLTGWMSLSRKP 100 YD + + D + + Sbjct: 567 EAKAKAIEEWADDGSFHTKLKWHPRLRQVAVYDAYD---VPTYYYFDLDGFTYRTRLADG 623 Query: 101 QVTWYGWDGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSG 160 + +WY DG + T Q D +T + L+++ G + + + ++ Sbjct: 624 RESWYSRDGKKRITRQIDFDGRETQQEYNDQDQLVKIVQPNGGIIRFAYNKQGNLVEIKD 683 Query: 161 GEDGGSVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARK 220 E + + D + ++ + + ++ + V Sbjct: 684 PEGS-------IWKREYDENRNVSKEINPLGHITQYKYNNDNQLVEVIDAKGGVKK---- 732 Query: 221 IHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQYDE 276 + G ++ G EYDE G L E+ + + D+ Sbjct: 733 ---IQYNELGQMISYTDCSGK-SSTWEYDEDGALTAEQTANNKVVQYFYSTKGRDK 784 Score = 56.0 bits (133), Expect = 3e-06, Method: Composition-based stats. Identities = 40/269 (14%), Positives = 78/269 (28%), Gaps = 52/269 (19%) Query: 14 LYRYDRHGRLTEK----------------TDLIPEGVIRTDDERTHRYHYDSQHRLVHYT 57 + YD G LT + D I D + +D + RL+ +T Sbjct: 753 TWEYDEDGALTAEQTANNKVVQYFYSTKGRDKGQLQSIIYPDGLKEYFEHDEEGRLLKHT 812 Query: 58 RTQYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQN 117 T+ + + Y Y+ +G + +R+ + Y WD Sbjct: 813 DTKG----LVTEYKYNQVG-LLEQRIDANRHSVA-------------YQWDKQGRIQKLI 854 Query: 118 DRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVL---- 173 ++ + + ++ + LIR + GE Q + Sbjct: 855 NQNQAEYLFGYNPYGYLIREQAFDGEEKHYSYNENGRLFQIRRPNILTQFDYYADGQIAS 914 Query: 174 -----VQMLDRLESEILADRVSEESR---------RWLASCGLTVEQMQNQMDPVYTPAR 219 + + + + S+ SR + + G V + Q+ P P Sbjct: 915 KSFTHLHTGQKQTEQFDYNLNSQLSRASNEVSQIDLYRNALGQLVREHQHYKIPELKPLT 974 Query: 220 KIHLYHCDHRGLPLALVSTEGATEWCAEY 248 + Y D G + + +G T Y Sbjct: 975 AVLHYEYDELGNLIKTIRPDGHTLNHLVY 1003 Score = 46.0 bits (107), Expect = 0.004, Method: Composition-based stats. Identities = 49/346 (14%), Positives = 104/346 (30%), Gaps = 77/346 (22%) Query: 1 MWPDNRIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDER------------THRYHYD 48 ++PD + + +D GRL + TD ++ + Y +D Sbjct: 791 IYPDG-LKEY----FEHDEEGRLLKHTDTKGLVTEYKYNQVGLLEQRIDANRHSVAYQWD 845 Query: 49 SQHR---LVHYTR--------------TQYAEPLVESRYLYDPLGRRVAKRVWRRERDLT 91 Q R L++ + + A E Y Y+ GR R Sbjct: 846 KQGRIQKLINQNQAEYLFGYNPYGYLIREQAFDGEEKHYSYNENGRLFQIRRPNILTQFD 905 Query: 92 GWMSLSRKP-----------QVTWYGWDGDRLTTIQNDRTRIQTIYQPGSFTPLIRVE-- 138 + Q + ++ + + ++ +Y+ + L+R Sbjct: 906 YYADGQIASKSFTHLHTGQKQTEQFDYNLNSQLSRASNEVSQIDLYR-NALGQLVREHQH 964 Query: 139 ------TATGELAKTQRRSLADTLQ--QSGGEDGGSVVFPPVLVQMLDRLESEILA---D 187 + + L + ++ + G +V+ + + E+++ D Sbjct: 965 YKIPELKPLTAVLHYEYDELGNLIKTIRPDGHTLNHLVYGSGHIYAIGLNNQEVVSFQRD 1024 Query: 188 RVSEESRRWLASCGLTVEQMQNQM-------DPVYTPARKIHL-----YHCDHRGLPLAL 235 + E+ R LA+ + +Q + P + YH D L + Sbjct: 1025 DLHRETTRLLANGLMQTKQYNDVGLLSSQFIQPEQETQDYLQYQAHRKYHYDKNYLLSQV 1084 Query: 236 VSTE-GATEWCAEYDEWGNLLNEENPHQLQQLIRL--PGQQYDEES 278 + G +YD G L+ ++ H+ + G D ES Sbjct: 1085 EDSRLGKL--NYQYDPIGRLIAAQSLHKTES-FNFDPAGNLIDSES 1127 >UniRef50_C4NV50 Rhs repeat family protein n=10 Tax=Gammaproteobacteria RepID=C4NV50_ECOLX Length = 1374 Score = 187 bits (474), Expect = 8e-46, Method: Composition-based stats. Identities = 78/332 (23%), Positives = 111/332 (33%), Gaps = 38/332 (11%) Query: 8 ARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVE 67 AR +YRY ++ D + YD+ R+ Sbjct: 919 ARVHSLVYRYTPDSLISAIDDNLSSS-------VNQSLGYDAVGRITSAEGIYGVLG--- 968 Query: 68 SRYLYDPLGRRVAKRVWRRERDLTGWMSLS--RKPQVTWYGWDGDRLTTIQNDRTRIQTI 125 Y YD G R + + T + K T +D + T Q T Sbjct: 969 --YGYDATGNRTSITTDGLSQSYTINYMNNWLVKAGQTSRSYDANGNLTKQGADT----- 1021 Query: 126 YQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEIL 185 + S L+ T G L + ++ +V+ L E L Sbjct: 1022 FTYDSQNRLVAA-TVAGVTVSYTYNHLDQRVTKTLNGHTRLLVY------DLAGNLIEEL 1074 Query: 186 ADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWC 245 + ++ G + +Q + + + H DH G P AL G W Sbjct: 1075 DAATGDVLAEYIWLDGTPLGFVQ---------SGQTYQVHVDHLGTPKALTDVSGQVVWK 1125 Query: 246 AEYDEWGNLLNEENPHQLQQLIRLPGQQYDEESGLYYNRHRYYDPLQGRYITQDPIGLKG 305 A Y +G +R PGQ YD E+G +YN RYYDP GRYIT DP+GL Sbjct: 1126 ASYSPFGKASIIIQGPTF--NLRFPGQYYDAETGFHYNWRRYYDPATGRYITSDPLGLID 1183 Query: 306 GWNFYQYPL-NPVQYIDSMGLASKYGHLNNGG 336 G N Y Y NP+ D G + G G Sbjct: 1184 GVNTYGYVHGNPMSNTDPTGEFAFVGAGIGAG 1215 Score = 67.9 bits (164), Expect = 7e-10, Method: Composition-based stats. Identities = 40/275 (14%), Positives = 69/275 (25%), Gaps = 38/275 (13%) Query: 6 RIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPL 65 R + YD G L T+ + + D YD+ R T Sbjct: 498 RTDVSDVTTFDYDDQGNLIRTTNALGQVTQFGD--------YDANGR----AGTIQGVNG 545 Query: 66 VESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTI 125 V YD GR V+ T Y +D L + Sbjct: 546 VTQTLTYDARGRLVSST---------------GPEGTTVYNYDAVGLLSSLTKPNGATVS 590 Query: 126 YQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEIL 185 Y+ + L+ A G + + L + +++ + G + + S + Sbjct: 591 YEYDAAHRLVAETDAQGNRRELELNDLGNPVEERLLDALGQTRWIERRIFNEIGWLSSVS 650 Query: 186 ADRVSEESRRWLASCGLTVEQMQNQMDPVYTPAR-KIHLYHCDHRGLPL-ALVSTEGAT- 242 ++ S + L E + Y D G L G Sbjct: 651 DAYSNQSSFSYDVVANLIQETSPSGNTHSYKYDGFHHRTQTTDPLGKVTQVLYKDTGDVY 710 Query: 243 --------EWCAEYDEWGNLLNEENPHQLQQLIRL 269 Y+ +G + +P I Sbjct: 711 RVSDPRSRLTYYSYNGFGEVTQVRSPDTGTTDITY 745 Score = 64.1 bits (154), Expect = 1e-08, Method: Composition-based stats. Identities = 41/332 (12%), Positives = 69/332 (20%), Gaps = 91/332 (27%) Query: 3 PDNRIARDAHY-----LYRYDRHGRLTEKTDLIPEGVIR-----------TDDERTHRYH 46 + R YD GRL T V + T Y Sbjct: 533 ANGRAGTIQGVNGVTQTLTYDARGRLVSSTGPEGTTVYNYDAVGLLSSLTKPNGATVSYE 592 Query: 47 YDSQHRLVHYTRTQYAEP------------------------------------------ 64 YD+ HRLV T Q Sbjct: 593 YDAAHRLVAETDAQGNRRELELNDLGNPVEERLLDALGQTRWIERRIFNEIGWLSSVSDA 652 Query: 65 -LVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVT-------------------- 103 +S + YD + + + + + Q T Sbjct: 653 YSNQSSFSYDVVANLIQETSPSGNTHSYKYDGFHHRTQTTDPLGKVTQVLYKDTGDVYRV 712 Query: 104 --------WYGWDGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADT 155 +Y ++G T T + +TA G+ +L Sbjct: 713 SDPRSRLTYYSYNGFGEVTQVRSPDTGTTDITYDEAGNVATRKTAKGQTTSYSYDALNRI 772 Query: 156 LQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVY 215 ++ S G S + + + RR+ + + + Sbjct: 773 IETSSDVAGESPILYGYDEATSPYGIGRLTSVDDGNGVRRFGYTPEGWLAYETWETHGQS 832 Query: 216 TPARKIHLYHCDHRGLPLALVSTEGATEWCAE 247 + Y D GL + G Sbjct: 833 LTTQ----YQYDGAGLVTKITYPSGREVSYTR 860 Score = 59.8 bits (143), Expect = 2e-07, Method: Composition-based stats. Identities = 37/303 (12%), Positives = 83/303 (27%), Gaps = 39/303 (12%) Query: 2 WPDNRIAR-----DAHYLYRYDRHGRLTEKTDLIP----------------EGVIRTDDE 40 + D R+ Y+Y+ G+L E G++ + Sbjct: 254 YQDGRMVSVTDPAGGSIQYQYNSAGKLAEVIYQDNTSRSYLYDDPNAPGLLSGLVDENGN 313 Query: 41 RTHRYHYDSQHRLVHYTRTQYAEPLVESRYLYDPLGRRVAKRVWRRERDLT--------- 91 R + YD+Q R +++A +++ Y+ G + T Sbjct: 314 RFATWGYDTQGR---AVLSEHAGGAEKTQVSYNADGSVSVTNALGHVQRYTYSRHNGMLK 370 Query: 92 -----GWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAK 146 G Y +D L + DR + + G Sbjct: 371 PDVVEGAPCTGFVGGKETYVYDSKGLVSSITDRAGQKRTFTHNDRGLETTQIDQDGGKVT 430 Query: 147 TQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQ 206 T + + + ++++ R ++ + + + A G Sbjct: 431 TDWLPSKSLPAKITEPTRITELTYDTHLRVISRKVTDRSSGASRTWTYTY-APVGTGKPS 489 Query: 207 MQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQL 266 + +D T + + D +G + + G +YD G + + + Q Sbjct: 490 LLASVDGPRTDVSDVTTFDYDDQGNLIRTTNALGQVTQFGDYDANGRAGTIQGVNGVTQT 549 Query: 267 IRL 269 + Sbjct: 550 LTY 552 Score = 56.7 bits (135), Expect = 2e-06, Method: Composition-based stats. Identities = 34/209 (16%), Positives = 53/209 (25%), Gaps = 26/209 (12%) Query: 6 RIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPL 65 R YD G + + +T +T Y YD+ +R++ + E Sbjct: 734 RSPDTGTTDITYDEAGNVATR---------KTAKGQTTSYSYDALNRIIETSSDVAGESP 784 Query: 66 VESRYLYDPL------GRRVAKRVWRR---------ERDLTGWMSLSRKPQVTWYGWDGD 110 + Y YD GR + + T Y +DG Sbjct: 785 IL--YGYDEATSPYGIGRLTSVDDGNGVRRFGYTPEGWLAYETWETHGQSLTTQYQYDGA 842 Query: 111 RLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFP 170 L T + + Y S +I V T + Sbjct: 843 GLVTKITYPSGREVSYTRDSAGDVIEVTTTQAGTTTNLASQIERAPFGPVTSMVRGNGIS 902 Query: 171 PVLVQMLDRLESEILADRVSEESRRWLAS 199 LD + I A RV R+ Sbjct: 903 ESRTLDLDYRVTGIDAARVHSLVYRYTPD 931 Score = 52.9 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 38/247 (15%), Positives = 66/247 (26%), Gaps = 42/247 (17%) Query: 2 WPDNRIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQY 61 + +N + + YD +G LT++ + YDSQ+RLV T Sbjct: 993 YMNNWLVKAGQTSRSYDANGNLTKQ--------------GADTFTYDSQNRLVAATV--- 1035 Query: 62 AEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTR 121 V Y Y+ L +RV K L+ ++ Y G+ + + Sbjct: 1036 --AGVTVSYTYNHLDQRVTKT-------------LNGHTRLLVYDLAGNLIEELDAATGD 1080 Query: 122 IQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLE 181 + Y TPL V++ L G+ + P + Sbjct: 1081 VLAEYIWLDGTPLGFVQSGQTYQVHVDHLGTPKALTDVSGQVVWKASYSPFGKASIIIQG 1140 Query: 182 SEI-------LADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLA 234 D + W + + Y G P++ Sbjct: 1141 PTFNLRFPGQYYDAETGFHYNWRRYYDPATGRYITSDPLGLIDGVNTYGYV---HGNPMS 1197 Query: 235 LVSTEGA 241 G Sbjct: 1198 NTDPTGE 1204 >UniRef50_C9RNI1 FG-GAP repeat protein n=2 Tax=Fibrobacter succinogenes subsp. succinogenes S85 RepID=C9RNI1_FIBSS Length = 2237 Score = 187 bits (474), Expect = 9e-46, Method: Composition-based stats. Identities = 55/368 (14%), Positives = 104/368 (28%), Gaps = 56/368 (15%) Query: 4 DNRIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDD--ERTHRYHYDSQHRLVHYTRTQY 61 +N Y YD G +T+ D + + + ++ YD+ +RL+ T ++ Sbjct: 1618 NNGADILQDLNYTYDAVGNVTQIDDNAQQTIFFNGSVVSPSQKFEYDALYRLIKATGREH 1677 Query: 62 AE-------------------------PLVESRYLYDPLGRRVAKRVWRRERDLTGWMSL 96 + YD +G ++ T Sbjct: 1678 VSVNADSEPEAEGYNAALISPQDGTAMRNYAREWEYDGVGNILSIIHNANGNAWT----- 1732 Query: 97 SRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQPGS------------FTPLIRVETATGEL 144 + Y D +RLT +T Y + ++ + Sbjct: 1733 ----RTNAYATDSNRLTGTTVGQTTANFAYNAHGSMTSMPHLSAMDWDFAEKLSHISRGT 1788 Query: 145 AKTQRRSLADTLQQSG----GEDGGSVVFPPVLVQMLDRLESEILADRVSEESRRWLASC 200 + + ++ ++ + + +R + Sbjct: 1789 TEAYYNYDGNGIRTRKVVEKNGSVEIRLYLGGFEIWRKTVNGTLETERETLHVMDDQKRI 1848 Query: 201 GLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENP 260 + + PA +H G + EY +G+ Sbjct: 1849 AIVETLTVENGNRAAAPAPVQRYQLDNHLGSASLELDDSANIISYEEYYPYGDTSYRAGR 1908 Query: 261 HQLQ---QLIRLPGQQYDEESGLYYNRHRYYDPLQGRYITQDPIGLKGGWNFYQYPL-NP 316 + + R G++ DEES LYY R+Y R+++ DP L G N Y Y NP Sbjct: 1909 SASEVSRKRYRYTGKEKDEESSLYYCEQRFYAAHISRWVSTDPTWLADGINLYAYVHGNP 1968 Query: 317 VQYIDSMG 324 V +D G Sbjct: 1969 VSGVDPSG 1976 Score = 62.1 bits (149), Expect = 4e-08, Method: Composition-based stats. Identities = 34/242 (14%), Positives = 65/242 (26%), Gaps = 25/242 (10%) Query: 16 RYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDS-QHRLVH--YTRTQYAEPLVESRYLY 72 YD G+ + T Y YD RLV TR A+ L + Y Y Sbjct: 1581 DYDAKGQRERIQ---------YGNGSTTGYTYDGKTFRLVRLLTTRNNGADILQDLNYTY 1631 Query: 73 DPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQPGSFT 132 D +G + ++ + S+ Q Y + + + +P + Sbjct: 1632 DAVGNVT-QIDDNAQQTIFFNGSVVSPSQKFEYDALYRLIKATGREHVSVNADSEPEAEG 1690 Query: 133 PLIRVETATGELA------KTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILA 186 + + A + + + + L +G + +RL + Sbjct: 1691 YNAALISPQDGTAMRNYAREWEYDGVGNILSIIHNANGNAWTRTNAYATDSNRLTGTTVG 1750 Query: 187 DRVSEESRRWLASCGLTVEQMQNQMDPVY-----TPARKIHLYHCDHRG-LPLALVSTEG 240 + + S D + Y+ D G +V G Sbjct: 1751 QTTANFAYNAHGSMTSMPHLSAMDWDFAEKLSHISRGTTEAYYNYDGNGIRTRKVVEKNG 1810 Query: 241 AT 242 + Sbjct: 1811 SV 1812 Score = 44.4 bits (103), Expect = 0.009, Method: Composition-based stats. Identities = 37/297 (12%), Positives = 73/297 (24%), Gaps = 48/297 (16%) Query: 16 RYDRHGRLTEKT-------------DLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYA 62 YD G L + + ++ + + T YD+ +R A Sbjct: 1484 AYDFKGNLLQSSRQFTKAYNQTIDWNVADPDALLEAETFTTVTAYDALNRATSIRTPHNA 1543 Query: 63 E-PLVESRYLYDPLGRR----VAKRVWRRERDLTGWMSLSRKPQ----------VTWYGW 107 P E Y+ V R + + K Q T Y + Sbjct: 1544 GVPASEILPAYNEASLLESVDVKLRGSGTATNFVQNIDYDAKGQRERIQYGNGSTTGYTY 1603 Query: 108 DGD-----RLTTIQNDRTR--IQTIYQPGSFTPLIRVETATGELAKTQR----------R 150 DG RL T +N+ Y + + +++ + Sbjct: 1604 DGKTFRLVRLLTTRNNGADILQDLNYTYDAVGNVTQIDDNAQQTIFFNGSVVSPSQKFEY 1663 Query: 151 SLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQ 210 L ++ G + SV D + + + Sbjct: 1664 DALYRLIKATGREHVSVNADSEPEAEGYNAALISPQDGTAMRNYAREWEYDGVGNILSII 1723 Query: 211 MDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLI 267 + + + Y D +T G T Y+ G++ + + + Sbjct: 1724 HNANGNAWTRTNAYATD---SNRLTGTTVGQTTANFAYNAHGSMTSMPHLSAMDWDF 1777 >UniRef50_D1AA66 YD repeat-containing protein n=1 Tax=Thermomonospora curvata DSM 43183 RepID=D1AA66_THECD Length = 1197 Score = 186 bits (473), Expect = 1e-45, Method: Composition-based stats. Identities = 71/333 (21%), Positives = 112/333 (33%), Gaps = 41/333 (12%) Query: 10 DAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESR 69 H + D GR+T RY YDS ++H +P S Sbjct: 814 SGHRAFELDAVGRITAVQ----------GQGGNERYTYDSAGNIIHALWPTDGDPSALSA 863 Query: 70 YLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQ----TI 125 D G R + R+ Y +D ++ Sbjct: 864 ---DAAGER------------SYTGVRIRRAGRIHYEYDAQGRVVLRRHARLSSKPLIWR 908 Query: 126 YQPGSFTPLIRVETATGELAKTQRRSLADTLQQSG-GEDGGSVVFPPVLVQMLDRLESEI 184 + + L V+T G + L + + DG +++ + + +I Sbjct: 909 FYWNAEDRLTSVQTPDGHWWRYLYDPLGRRIAKQHLAPDGKTLLEQIDFIWEGPSIAEQI 968 Query: 185 LA-----DRVSEESRRWLASCGLTVEQMQNQMDPVYTPA-----RKIHLYHCDHRGLPLA 234 ++ W G Q++ R+ H D G P+ Sbjct: 969 HYAWSAGQLSADHVTTWDYEPGTFQPLTQSEHITSGASQHGRAVRRFHAIIADLVGTPVE 1028 Query: 235 LVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEESGLYYNRHRYYDPLQGR 294 LV+ +G+ W + WG Q+ + PGQ YD E+GLY+N RYY P GR Sbjct: 1029 LVAPDGSISWRSHAAVWGAP-YVSRADQISCPLGFPGQYYDSETGLYFNYFRYYSPFDGR 1087 Query: 295 YITQDPIGLKGGWNFYQYPLNPVQYIDSMGLAS 327 Y++ DP+GL N Y Y +NP + D GL Sbjct: 1088 YLSPDPLGLSPQPNPYIYVINPFVWADPFGLYP 1120 Score = 91.0 bits (224), Expect = 8e-17, Method: Composition-based stats. Identities = 65/475 (13%), Positives = 118/475 (24%), Gaps = 91/475 (19%) Query: 6 RIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPL 65 R+ A + YD LTE R+ YD RL +T T Sbjct: 258 RMGETALKTFDYDEAANLTEVAGPTGAP---------TRFDYDEAGRLTRWTDTNGN--- 305 Query: 66 VESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRK------PQVTWYGWDGDRLTTIQNDR 119 Y YD GR + ++ R T Y ++ R + + Sbjct: 306 -WYAYTYDERGRAIRGTGSGGYLNVALEYHDDRTVLTDSLGHRTVYHFNERRQLVAETNP 364 Query: 120 TRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVF-----PPVLV 174 T Y+ L+ V G + ++ + + + + P + Sbjct: 365 LGAVTRYEWDDNDRLLTVTDPLGRTVRYTYDEFSNITSITRPDGAVTTITYNDQCRPTQI 424 Query: 175 QMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMD--PVYTPARKIHLYHCDHRGLP 232 D D + + + + V PA C+ GLP Sbjct: 425 VEFDGAIWNSTYDERGNLLTQTDPTGAVIRCTYDERGALTSVTDPAGGTTRIECNPAGLP 484 Query: 233 LALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEESGLYYNRHRYYDPLQ 292 +A+ ++ G Y+ G + Sbjct: 485 IAVTNSRGGVT-RYRYNPLGRITEL----------------------------------- 508 Query: 293 GRYITQDPIGLKGGWNFYQYPLNPVQYIDSMG-LASKYGHLNNGGYGARPNKPPTPDPSK 351 DPIG + + G L S+ + + ++ + ++ Sbjct: 509 -----VDPIGGVSTF----------TWT-PDGRLTSRTTPDGASEHWSYDHEGNLVEYTR 552 Query: 352 LPDIAKQLRLPYPIDQASSAPNVFKTFFRALSPYDYTLYCRKWVKPNLTCTPQDDSQYPG 411 + + F + P L + LT Sbjct: 553 PTGQTTRWEIGP-----------FDQPIAWIGPDGGRLEFAYDTELRLTSVTNPQGLVWR 601 Query: 412 MDTKTASDYLPQTNWPTTQLPPGYTCAEPYLFPDINKPDGPATAGIDDLGEILAK 466 A + + +T++ + Y A L N D LG I+ K Sbjct: 602 YAYDVAGNLISETDFNGRVVHYAYDAAG-QLTTYTNGAGQVTAFTRDVLGAIVRK 655 Score = 69.1 bits (167), Expect = 3e-10, Method: Composition-based stats. Identities = 39/304 (12%), Positives = 68/304 (22%), Gaps = 61/304 (20%) Query: 16 RYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEP----------- 64 YD G L +TD + R YD + L T Sbjct: 435 TYDERGNLLTQTDPTGAVI---------RCTYDERGALTSVTDPAGGTTRIECNPAGLPI 485 Query: 65 ------LVESRYLYDPLGRRVAKR---------VWRRERDLTGWMSLSRKPQVTWYGWDG 109 +RY Y+PLGR W + LT + + Y +G Sbjct: 486 AVTNSRGGVTRYRYNPLGRITELVDPIGGVSTFTWTPDGRLTSRTTPDGASEHWSYDHEG 545 Query: 110 DRLTTIQNDRTRIQT-------------------IYQPGSFTPLIRVETATGELAKTQRR 150 + + + + + + L V G + + Sbjct: 546 NLVEYTRPTGQTTRWEIGPFDQPIAWIGPDGGRLEFAYDTELRLTSVTNPQGLVWRYAYD 605 Query: 151 SLADTLQQSGGEDGGSVVFPP-----VLVQMLDRLESEILADRVSEESRRWLASCGLTVE 205 + + ++ + D + R+ T Sbjct: 606 VAGNLISETDFNGRVVHYAYDAAGQLTTYTNGAGQVTAFTRDVLGAIVRKDAGGEITTFT 665 Query: 206 QMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQ 265 + D G A + G YDE GN + P + Sbjct: 666 YDRAGRLVRAVNTHADLRLERDLLGRVTAEI-CNGRVL-RWTYDEVGNRVRRRTPSGAES 723 Query: 266 LIRL 269 + Sbjct: 724 VWTY 727 Score = 66.4 bits (160), Expect = 2e-09, Method: Composition-based stats. Identities = 41/278 (14%), Positives = 70/278 (25%), Gaps = 60/278 (21%) Query: 9 RDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVES 68 R YRY+ GR+TE D I + + RL T A Sbjct: 491 RGGVTRYRYNPLGRITELVDPI---------GGVSTFTWTPDGRLTSRTTPDGAS----E 537 Query: 69 RYLYDPLGRRVAKRVWRRERDLTGWMSLSR----------------------------KP 100 + YD G V + + + Sbjct: 538 HWSYDHEGNLVEYTRPTGQTTRWEIGPFDQPIAWIGPDGGRLEFAYDTELRLTSVTNPQG 597 Query: 101 QVTWYGWDGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSG 160 V Y +D + D Y + L G++ R L +++ Sbjct: 598 LVWRYAYDVAGNLISETDFNGRVVHYAYDAAGQLTTYTNGAGQVTAFTRDVLGAIVRKDA 657 Query: 161 GEDGGSVVFPPVLV-----------QMLDRLESEILADRVSEESRRWLASCGLTVEQMQN 209 G + + + ++ L + A+ + RW V Sbjct: 658 GGEITTFTYDRAGRLVRAVNTHADLRLERDLLGRVTAEICNGRVLRWTYDE---VGNRVR 714 Query: 210 QMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWCAE 247 + P + + D GLPL+L + G Sbjct: 715 RRTPSGAESVWTY----DPAGLPLSLTTA-GQVITFEH 747 Score = 59.1 bits (141), Expect = 4e-07, Method: Composition-based stats. Identities = 39/289 (13%), Positives = 72/289 (24%), Gaps = 49/289 (16%) Query: 13 YLYRYDRHGRLTEKTDLIPEGVIRTD----------DERTHRYHYDSQHRLVHYTRTQYA 62 + YDR GRL + + + D + R R+ YD V A Sbjct: 662 TTFTYDRAGRLVRAVNTHADLRLERDLLGRVTAEICNGRVLRWTYDEVGNRVRRRTPSGA 721 Query: 63 EPLVES----------------RYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYG 106 E + + +D GR V +R+ W ++ R +G Sbjct: 722 ESVWTYDPAGLPLSLTTAGQVITFEHDAAGREVRRRIGTGVILDQQWDAVHRLTSQALWG 781 Query: 107 WDGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGS 166 + R Y I + + ++ G Sbjct: 782 APA---SPTAQPRLLQHRTYSYRPDDYPIAITDRLSGHRAFELDAVGRITAVQGQGGNER 838 Query: 167 VVFPPVL-----VQMLDRLESEILADRVSEESRR-----------WLASCGLTVEQMQNQ 210 + + D S + AD E S + V ++ Sbjct: 839 YTYDSAGNIIHALWPTDGDPSALSADAAGERSYTGVRIRRAGRIHYEYDAQGRVVLRRHA 898 Query: 211 MDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEEN 259 + + D + +G W YD G + +++ Sbjct: 899 RLSSKPLIWRFYWNAEDRLTSVQ---TPDGHW-WRYLYDPLGRRIAKQH 943 >UniRef50_Q9L0E3 Putative Rhs protein n=2 Tax=Streptomyces RepID=Q9L0E3_STRCO Length = 927 Score = 186 bits (472), Expect = 1e-45, Method: Composition-based stats. Identities = 89/368 (24%), Positives = 116/368 (31%), Gaps = 50/368 (13%) Query: 8 ARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDD-----------------ERTHRYHYDSQ 50 RYD GR TE+ R D +Y Y + Sbjct: 454 TGSQSLTVRYDAAGRETERRTGPMAMAQRWDGYDRLVEQRLLDVHKEQFALLRQYSYRAD 513 Query: 51 HRLVHYTRTQYAEPLVE----------------SRYLYDPLGRRV--------AKRVWRR 86 LV + E +Y YDP G A+ R Sbjct: 514 DHLVEVADSFAGRRRFELDAGTHVTAVRADHWSEQYAYDPAGDVSHGDWPLSAAQGDARS 573 Query: 87 ERDLTGWMSLS-RKPQVTWYGWDGD----RLTTIQNDRTRIQTIYQPGSFTPLIRVETAT 141 G SL R+ T Y D R T +R Y L V T Sbjct: 574 AVGDRGEGSLGVRRAGRTTYEHDAQGRMTRRVTRALSGSRRVWEYAWNDQDQLREVVTPD 633 Query: 142 GELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSEESRRWLASCG 201 G + L + + D G L + A S W G Sbjct: 634 GARWQYLYDGLGRRIAKQLMGDDGGSRERVDFTWDGTDLAEQASATEDRVVSWDWSPHTG 693 Query: 202 LTVEQMQNQMDPVYTP---ARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEE 258 + Q + P + + + D G P LVS +G W WG ++ Sbjct: 694 DPLVQTERPCGPELSQREVDTRFYAIVTDLVGAPTELVSPDGDIGWRLRTTLWGLPVDGS 753 Query: 259 NPHQLQQLIRLPGQQYDEESGLYYNRHRYYDPLQGRYITQDPIGLKGGWNFYQYPLNPVQ 318 +R PGQ +D E+GL+YN RYYDP GRY + DP+GL GG N Y NP Sbjct: 754 G-GSTDCPLRFPGQYHDPETGLHYNYFRYYDPGLGRYCSLDPLGLAGGPNPAWYTPNPTA 812 Query: 319 YIDSMGLA 326 +ID GLA Sbjct: 813 WIDPFGLA 820 Score = 67.9 bits (164), Expect = 8e-10, Method: Composition-based stats. Identities = 41/262 (15%), Positives = 67/262 (25%), Gaps = 34/262 (12%) Query: 16 RYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYLYD-P 74 YDR R+ R + +RY YD+ R RT ++ + YD Sbjct: 3 SYDREHRIV---------GWRDRNGTEYRYEYDAHGR---CVRTIGSDGYQSGTFRYDPA 50 Query: 75 LGRRVAKRVWRRERDLTGWMSL------SRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQP 128 G V L + T WD D + D T Y Sbjct: 51 AGETVHVDSLGHATTFRYNRDLRITAEINALGNSTATEWDEDGRVLTETDALGRTTRYTY 110 Query: 129 GSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADR 188 + L V G + + ++ DG F L + Sbjct: 111 DAQDNLRTVIRPDGSHVTAE-HGVLGLPERVVEADGSQWSFEYDTAGNL------LSITD 163 Query: 189 VSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWCAEY 248 + + R+ + N + Y D G ++ GA Y Sbjct: 164 PANATARYTYGESGRLLAATNALGAEEA-------YAYDSFGRVVSHFDALGAET-KFTY 215 Query: 249 DEWGNLLNEENPHQLQQLIRLP 270 D +G + + + Sbjct: 216 DSFGRMESTTDSLGHVTRYGWT 237 Score = 65.6 bits (158), Expect = 4e-09, Method: Composition-based stats. Identities = 44/315 (13%), Positives = 61/315 (19%), Gaps = 63/315 (20%) Query: 6 RIARDAHYLYRYDRHGRLTEKTD-------------LIPEGVIRTDDERTHRYHYDSQHR 52 R Y Y YD HGR E V + Y+ R Sbjct: 14 RDRNGTEYRYEYDAHGRCVRTIGSDGYQSGTFRYDPAAGETVHVDSLGHATTFRYNRDLR 73 Query: 53 LVHYTRTQYAEPLV-----------------ESRYLYDPLGRRVAKRVWRRERDLTGWMS 95 + +RY YD Sbjct: 74 ITAEINALGNSTATEWDEDGRVLTETDALGRTTRYTYDAQDNLRTVIRPDGSHVTAEHGV 133 Query: 96 LS-------RKPQVTWYGWDGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQ 148 L + +D D Y G L+ A G Sbjct: 134 LGLPERVVEADGSQWSFEYDTAGNLLSITDPANATARYTYGESGRLLAATNALGAEEAYA 193 Query: 149 RRSLADTLQQSGGEDGGSVVFPPVLVQM---LDRLESEILADRVSEESRRWLASCGLTVE 205 S + + +M D L E W S E Sbjct: 194 YDSFGRVVSHFDALGAETKFTYDSFGRMESTTDSLGHVTRYGWTLEGLMAWRTSSDGARE 253 Query: 206 QMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQ 265 + T H D G ++Y +G L + P + Sbjct: 254 HWTYDGEGNETE-------HHDAVGGVT-----------TSQYTHFGLLASRTQPDGARL 295 Query: 266 LIRLPGQQYDEESGL 280 R +D E L Sbjct: 296 SFR-----HDTELRL 305 Score = 57.1 bits (136), Expect = 1e-06, Method: Composition-based stats. Identities = 40/283 (14%), Positives = 68/283 (24%), Gaps = 50/283 (17%) Query: 8 ARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRT-------- 59 AR + Y YD G L + D + Y YD+ +LV T Sbjct: 311 ARSREWSYTYDAVGNLVGERDFFGRALE---------YAYDAADQLVTRTNALGRSTHYR 361 Query: 60 --------QYAEPLVESRYLYDPLGRRVAKRVW-------RRERDLTGWMSLSRKPQVTW 104 + +RY YD LGR R S + + Sbjct: 362 HDLMGNVIEQRSGDGVARYSYDALGRMARAENADSVVILERDPVGRIVAESCNGRTLRNK 421 Query: 105 YGWDGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDG 164 Y G R+ + + + T + + + + ++ G Sbjct: 422 YDALGRRIHRHTPGGAFSVW--EYDAADRPTALHTGS-QSLTVRYDAAGRETERRTGPMA 478 Query: 165 GSVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIH-- 222 + + + RL + A L + H Sbjct: 479 MAQRWDGYDRLVEQRLLDVHKEQFALLRQYSYRADDHLVEVADSFAGRRRFELDAGTHVT 538 Query: 223 LYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQ 265 DH YD G++ + + P Q Sbjct: 539 AVRADH-------------WSEQYAYDPAGDVSHGDWPLSAAQ 568 Score = 56.4 bits (134), Expect = 2e-06, Method: Composition-based stats. Identities = 38/308 (12%), Positives = 72/308 (23%), Gaps = 61/308 (19%) Query: 10 DAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRT---------- 59 A Y YD GR+ D + ++ YDS R+ T + Sbjct: 187 GAEEAYAYDSFGRVVSHFDALGA---------ETKFTYDSFGRMESTTDSLGHVTRYGWT 237 Query: 60 -------QYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMS----------------- 95 + + + YD G + + Sbjct: 238 LEGLMAWRTSSDGAREHWTYDGEGNETEHHDAVGGVTTSQYTHFGLLASRTQPDGARLSF 297 Query: 96 -----------LSRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGEL 144 + + Y +D + D Y + L+ A G Sbjct: 298 RHDTELRLTSVTDARSREWSYTYDAVGNLVGERDFFGRALEYAYDAADQLVTRTNALGRS 357 Query: 145 AKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTV 204 + + + ++Q G+ + + ++ R SC Sbjct: 358 THYRHDLMGNVIEQRSGDGVARYSYDALGRMARAENADSVVILERDPVGRIVAESCNGRT 417 Query: 205 EQMQNQMDPVY----TPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWG-NLLNEEN 259 + + TP ++ D P AL + + YD G Sbjct: 418 LRNKYDALGRRIHRHTPGGAFSVWEYDAADRPTALHTGSQSLT--VRYDAAGRETERRTG 475 Query: 260 PHQLQQLI 267 P + Q Sbjct: 476 PMAMAQRW 483 Score = 51.3 bits (121), Expect = 9e-05, Method: Composition-based stats. Identities = 56/351 (15%), Positives = 101/351 (28%), Gaps = 21/351 (5%) Query: 107 WDGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGS 166 +D + DR + Y+ + +R + G + T R A G + Sbjct: 4 YDREHRIVGWRDRNGTEYRYEYDAHGRCVRTIGSDGYQSGTFRYDPAAGETVHVDSLGHA 63 Query: 167 VVFPP--------VLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPA 218 F + + + +E D L Q+ + V P Sbjct: 64 TTFRYNRDLRITAEINALGNSTATEWDEDGRVLTETDALGRTTRYTYDAQDNLRTVIRPD 123 Query: 219 RKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRL--PGQQYDE 276 GLP +V +G+ W EYD GNLL+ +P G+ Sbjct: 124 GSHVTAEHGVLGLPERVVEADGSQ-WSFEYDTAGNLLSITDPANATARYTYGESGRLLAA 182 Query: 277 ESGLYYNRHRYYDPLQGRYITQDPIGLKGGWNFYQYPLNPVQY----IDSMGLASKYGHL 332 + L YD GR ++ G + Y + DS+G ++YG Sbjct: 183 TNALGAEEAYAYD-SFGRVVSH--FDALGAETKFTY--DSFGRMESTTDSLGHVTRYGWT 237 Query: 333 NNGGYGARPNKPPTPDPSKLPDIAKQLRLPYPIDQASSAP-NVFKTFFRALSPYDYTLYC 391 G R + + + + +++ F P L Sbjct: 238 LEGLMAWRTSSDGAREHWTYDGEGNETEHHDAVGGVTTSQYTHFGLLASRTQPDGARLSF 297 Query: 392 RKWVKPNLTCTPQDDSQYPGMDTKTASDYLPQTNWPTTQLPPGYTCAEPYL 442 R + LT S+ + + + ++ L Y A+ + Sbjct: 298 RHDTELRLTSVTDARSREWSYTYDAVGNLVGERDFFGRALEYAYDAADQLV 348 >UniRef50_B3YAC7 YD repeat protein n=3 Tax=Salmonella enterica RepID=B3YAC7_SALET Length = 1499 Score = 185 bits (470), Expect = 2e-45, Method: Composition-based stats. Identities = 73/366 (19%), Positives = 122/366 (33%), Gaps = 18/366 (4%) Query: 8 ARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVE 67 + Y +D+ GRLT E +T E+ RY YD++ ++ R P E Sbjct: 1055 RPLGEHRYAWDKSGRLT-----GHEVWSKTRSEQETRYRYDNRDQITSVLRLNADGPAQE 1109 Query: 68 SRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDG----DRLTTIQNDRTRIQ 123 RY Y + R+ + + Y +D + T + + Sbjct: 1110 ERYRYTVNEQIAESRINGILSQHDYHNECVTQAGDSRYEYDACGRVIKRTEQKRGFRPQE 1169 Query: 124 TIYQPGSFTPLIRVETATGELAKTQRRSLADT-----LQQSGGEDGGSVVFPPVLVQMLD 178 Y+ F L V T GE+ + + + + ++ + V + Sbjct: 1170 WRYRWDDFDRLREVRTPDGEVWQYRYDAFGRRTAKRNIIRAAWKQNHHTVSEVRYQWLGM 1229 Query: 179 RLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVST 238 L + + R E + + + G P + S Sbjct: 1230 ALSASEKRYADGSPALREQWHYRGGFELLAKEARAANDDTSDFYPILIGPDGAPQEMYSA 1289 Query: 239 EGATEWCAEYDEWGNLLNEENP--HQLQQLIRLPGQQYDEESGLYYNRHRYYDPLQGRYI 296 G W + WG + + GQ DEESGL+YN HRY D G Y+ Sbjct: 1290 NGRKVWRRQRSLWGQSAANDASPDGRESCDAGFMGQWQDEESGLWYNLHRYMDSRTGHYL 1349 Query: 297 TQDPIGLKGGWNFYQYPLNPVQYIDSMGLASKYGHLNNGGYGARP--NKPPTPDPSKLPD 354 +QDP+ L GG N Y +PV + D +GL + A+ P + P++ Sbjct: 1350 SQDPLKLGGGLNTQSYVHDPVGWCDPLGLKCGGVNRRQALNEAKDLAGIPRSQQPNRQWT 1409 Query: 355 IAKQLR 360 + Sbjct: 1410 VGNNPM 1415 Score = 59.8 bits (143), Expect = 2e-07, Method: Composition-based stats. Identities = 36/292 (12%), Positives = 69/292 (23%), Gaps = 68/292 (23%) Query: 3 PDNRIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTD----------DERTHRYHYDSQHR 52 D R D G++T D R + +++ +Y Y + Sbjct: 637 ADGRKREWQR-----DAFGQITAYRDHRTTAAYRYNSEGNLVHREVNDQKWQYRYTEDGQ 691 Query: 53 LVHYTRTQYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVT--------- 103 + + ++ Y+ G A R VT Sbjct: 692 IKEVIYPDGS----REQWAYNAQGSLTAHTDAAGRTTHYAEDRWLRLTGVTDAEGRSTHW 747 Query: 104 ------------------------WYGWDGDRLTTIQNDRTRIQTIYQPGSFTPLIRVET 139 + +DG+ + T Y+ G+F L VE Sbjct: 748 QYRPGESNPHEKVSAVIRADGGAETFRYDGEGKIAVHTGAMGQTTRYRHGAFDLLREVED 807 Query: 140 ATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSEESRRWLAS 199 A G+ A Q + + ++ Q+ + W Sbjct: 808 AGGQRIVCDYDGAARLTQLTRSGNQRWRLYYDAAGQLAGEDD--------------WSGR 853 Query: 200 CGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEW 251 + Q ++ P + Y D G + +D + Sbjct: 854 RTVYRRDEQGRLAEKVRPDGSVWRYARDEFGRVTTITGERQQL--RYGWDLY 903 Score = 51.0 bits (120), Expect = 9e-05, Method: Composition-based stats. Identities = 46/286 (16%), Positives = 78/286 (27%), Gaps = 43/286 (15%) Query: 6 RIARDAHYLYR--YDRHGRLTEKTDLIPEGVIRT------------DDERTHRYHYDSQH 51 ++ R + +R YD G+L + D + D RY D Sbjct: 825 QLTRSGNQRWRLYYDAAGQLAGEDDWSGRRTVYRRDEQGRLAEKVRPDGSVWRYARDEFG 884 Query: 52 RLVHYTRTQYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDR 111 R+ T + + RY +D R V+ V+ +L+ + + W D R Sbjct: 885 RVTTITGER-----QQLRYGWDLYDRMVSAEVYECNDATQKDYTLTSRITLEW--DDRHR 937 Query: 112 LTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQ--------RRSLADTLQQSGGED 163 L + D R Y+ L +TA GE + RS ++ Sbjct: 938 LVAEEQDGQRT--EYRYDEAGRLTGTKTADGETQREYDASGALTAYRSNDHRMEFGHTRA 995 Query: 164 GGSVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHL 223 G LE L + + +CG T Q + Sbjct: 996 GQERSRRYRPEDEESWLEQTPL-NHAVYIQEQGHDACGRTAWQRAGAERLTGSHESVASW 1054 Query: 224 YHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRL 269 G G G+ + + + + R Sbjct: 1055 R---PLGEHRYAWDKSGRLT--------GHEVWSKTRSEQETRYRY 1089 Score = 46.7 bits (109), Expect = 0.002, Method: Composition-based stats. Identities = 39/299 (13%), Positives = 75/299 (25%), Gaps = 54/299 (18%) Query: 2 WPDNRIARDAHYLYRYDRHGRLTEKTDLIP---EGVIRTDDERTHRYH---------Y-- 47 W DN H+ RYD GR+ + ER Y + Sbjct: 528 WRDNGPT---HFHLRYDDEGRVVATGTEEGLYNDTFRYFPAERKTEYTDATGAVTTLWFD 584 Query: 48 ---------DSQHRLVHYTRTQYAEP-------LVESRYLYDPLGRRVAKRVWRRERDLT 91 D R+ + R +Y P ++ D GR +++ + Sbjct: 585 ETWLLIKQRDPLGRITEWGRDEYDHPVSIRQPGGRVTQIKRDYAGRILSETDADGRKREW 644 Query: 92 GWMSL--------SRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGE 143 + R Y +G+ + ND+ + Y+ + V G Sbjct: 645 QRDAFGQITAYRDHRTTAAYRYNSEGNLVHREVNDQ---KWQYRYTEDGQIKEVIYPDGS 701 Query: 144 LAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLT 203 + + + + +++ ++E S W G + Sbjct: 702 REQWAYNAQGSLTAHTDAAGRTTHYAEDRWLRLTGVTDAE-------GRSTHWQYRPGES 754 Query: 204 VEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQ 262 + + Y D G G T + + L E+ Sbjct: 755 NPHEKVSAVIRADGGAETFRY--DGEGKIAVHTGAMGQTT-RYRHGAFDLLREVEDAGG 810 Score = 45.2 bits (105), Expect = 0.006, Method: Composition-based stats. Identities = 35/278 (12%), Positives = 66/278 (23%), Gaps = 39/278 (14%) Query: 12 HYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYL 71 + Y+ G LT + Y + A+ RY Sbjct: 446 EIRFLYNGVGHLTNVEHSGGLRLRVMCGPEGLIYR-----------VSDEADGSELVRYD 494 Query: 72 YDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQPGSF 131 Y + + +R Y + D + Sbjct: 495 Y-----------THHGDEWWLRDAQTRFNGTLHYTYTEQGWLNSWRDNGPTHFHLRYDDE 543 Query: 132 TPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSE 191 ++ T G T R A+ + G + L + Sbjct: 544 GRVVATGTEEGLYNDTFRYFPAERKTEYTDATGAVTTLWFDETWL---LIKQRDPLGRIT 600 Query: 192 ESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEW 251 E R +++ Q P ++ D+ G L+ +G + D + Sbjct: 601 EWGRDEYDHPVSIRQ----------PGGRVTQIKRDYAGRILSETDADGRKR-EWQRDAF 649 Query: 252 GNLLNEENPHQLQQLIRLP--GQQYDEESGLYYNRHRY 287 G + + H+ R G E ++RY Sbjct: 650 GQITAYRD-HRTTAAYRYNSEGNLVHREVNDQKWQYRY 686 >UniRef50_A0LQM7 NHL repeat containing protein n=1 Tax=Syntrophobacter fumaroxidans MPOB RepID=A0LQM7_SYNFM Length = 1763 Score = 185 bits (469), Expect = 3e-45, Method: Composition-based stats. Identities = 68/317 (21%), Positives = 106/317 (33%), Gaps = 32/317 (10%) Query: 19 RHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYLYDPLGRR 78 GR+ KT+ + + Y YDS RL+ R + + Y YD G R Sbjct: 1396 AAGRIATKTETVN------GSTVEYAYEYDSLGRLLAVRR----DGVPAEEYRYDANGNR 1445 Query: 79 VAKRVW----RRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQPGSFTPL 134 + T Y +D D T + + + + Y S L Sbjct: 1446 TQETNTLLGIIGRTSTYSEEDHLLTSGGTVYRYDADGFLTTRTEGSAVT-RYVYSSRGEL 1504 Query: 135 IRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSEESR 194 + V G+ + L + + R + + Sbjct: 1505 LSVTLPDGKRIEYVNDPLGRRIAKKVNGTITQKY------LWQGRTRLLAVFGGNDDLIL 1558 Query: 195 RWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNL 254 R+ + G +M +T + D G + GA YD +GNL Sbjct: 1559 RFRYADG--------RMPLSFTKGGTEYSLSYDQVGTLRTVTDASGAVVKELVYDSFGNL 1610 Query: 255 LNEENPHQLQQLIRLPGQQYDEESGLYYNRHRYYDPLQGRYITQDPIGLKGG-WNFYQYP 313 + + NP G +D ++GL R YDP GR+ +DPIG GG N Y Y Sbjct: 1611 IGDTNPGFYV-PFGFAGGLHDPDTGLVRFGFRDYDPEVGRWTAKDPIGFGGGDTNLYGYC 1669 Query: 314 -LNPVQYIDSMGLASKY 329 +P+ ++DS GL Y Sbjct: 1670 LSDPINWVDSHGLKEHY 1686 Score = 68.3 bits (165), Expect = 6e-10, Method: Composition-based stats. Identities = 35/242 (14%), Positives = 60/242 (24%), Gaps = 36/242 (14%) Query: 6 RIARDAHYLYRYDRHGRLTEKT-----------DLIPEGVIRTDDERTHRYHYDSQHRLV 54 R+ + YD GR T D G + RT Y YD+ R Sbjct: 1114 RVPGYLDKSFGYDTRGRPTSIVIGERETKLAYDDQGRLGSVTDPGNRTTSYAYDAVGRTT 1173 Query: 55 HYTRTQYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTT 114 +R + + YD G +G++ L Sbjct: 1174 GVSRPDGS----TIGFSYDLNGNITVLANPAGTP--------------HAFGYNRVNLNG 1215 Query: 115 IQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRR-SLADTLQQSGGEDGGSVVFPPVL 173 +Y L RV +G+ + + ++ G + Sbjct: 1216 SYQTPLSGSYLYSYDRDRRLTRVLFPSGKEIRNVYEKANLARVETPEGNIEYGYLCSGRF 1275 Query: 174 VQMLDRLESEILADRVSEESRRWLASCGL------TVEQMQNQMDPVYTPARKIHLYHCD 227 + ++R I S L + ++ Y A + H Y D Sbjct: 1276 PESINRGGEGIAYGYDGPLVTSETFSGTLGGTLKYSYDEYYRVTLLSYAGATESHTYDND 1335 Query: 228 HR 229 Sbjct: 1336 GL 1337 Score = 52.9 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 39/203 (19%), Positives = 57/203 (28%), Gaps = 23/203 (11%) Query: 7 IARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLV 66 + +YRYD G LT +T+ RY Y S+ L+ T Sbjct: 1468 LLTSGGTVYRYDADGFLTTRTEGSA----------VTRYVYSSRGELLSVTLPDG----K 1513 Query: 67 ESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVT--------WYGWDGDRLTTIQND 118 Y+ DPLGRR+AK+V W +R V + + D + Sbjct: 1514 RIEYVNDPLGRRIAKKVNGTITQKYLWQGRTRLLAVFGGNDDLILRFRY-ADGRMPLSFT 1572 Query: 119 RTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLD 178 + + L V A+G + K L + D Sbjct: 1573 KGGTEYSLSYDQVGTLRTVTDASGAVVKELVYDSFGNLIGDTNPGFYVPFGFAGGLHDPD 1632 Query: 179 RLESEILADRVSEESRRWLASCG 201 E RW A Sbjct: 1633 TGLVRFGFRDYDPEVGRWTAKDP 1655 Score = 46.3 bits (108), Expect = 0.002, Method: Composition-based stats. Identities = 47/347 (13%), Positives = 77/347 (22%), Gaps = 96/347 (27%) Query: 9 RDAHYLYRYDRHGRLTEKTDLIP------------EGVIRTDDERTHRYHYDSQHRLVHY 56 + + YD +G +T + G +T ++ Y YD RL Sbjct: 1179 DGSTIGFSYDLNGNITVLANPAGTPHAFGYNRVNLNGSYQTPLSGSYLYSYDRDRRLTRV 1238 Query: 57 TRTQY------------------------------------AEPLVESRYLYDPLGRRVA 80 Y YD G V Sbjct: 1239 LFPSGKEIRNVYEKANLARVETPEGNIEYGYLCSGRFPESINRGGEGIAYGYD--GPLVT 1296 Query: 81 KRVWRRE---------RDLTGWMSLSRKPQVTWYGWDGDRLTTIQND------------- 118 + + LS + +D D L T D Sbjct: 1297 SETFSGTLGGTLKYSYDEYYRVTLLSYAGATESHTYDNDGLLTGTTDFTIRRDATSGFAE 1356 Query: 119 ---RTRIQTIYQPGSFTPLIRVETAT----GELAKTQRRSLADTLQQSGGEDGGSVVFPP 171 + L VE + R + ++ +G +V + Sbjct: 1357 AVLGATTAQNRAFNGYGELDGVEYRSMDNPVHSWSVSRSAAGRIATKTETVNGSTVEYAY 1416 Query: 172 VLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHR-- 229 + L + D V E R+ A+ T E + R DH Sbjct: 1417 EYDSLGRLLA--VRRDGVPAEEYRYDANGNRTQET----NTLLGIIGRTSTYSEEDHLLT 1470 Query: 230 -GLPLALVSTE--------GATEWCAEYDEWGNLLNEENPHQLQQLI 267 G + + G+ Y G LL+ P + Sbjct: 1471 SGGTVYRYDADGFLTTRTEGSAVTRYVYSSRGELLSVTLPDGKRIEY 1517 Score = 42.1 bits (97), Expect = 0.053, Method: Composition-based stats. Identities = 77/474 (16%), Positives = 124/474 (26%), Gaps = 81/474 (17%) Query: 18 DRHGRLT--EKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYLYDPL 75 DR G T + I + D T D +RL R+ Y+ Sbjct: 859 DRFGNRTTLARNADGVPTAIVSPDGHTTGLVVDDANRLREIIYPDGGS----YRFEYNAG 914 Query: 76 GRRVAKRVWRRERDLTGWMSLSRKPQV-------TWY----GWDGDRLTTIQNDRTRIQT 124 G + R G+ + + + Y G+ + + + Sbjct: 915 GLMTVQVQQGGNRFEHGFDAAGKLTDIIDEEGGHWRYSQKVTSTGEIRAEMLTGEGNLTS 974 Query: 125 IYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGED---------GGSVVFPPVLVQ 175 + + A T RS Q + + Sbjct: 975 YVDKNDGSGIFTSTITDPNGAATFYRSFPAAFQDLKWSACGLLLEFRYDYDPQYGFRFTR 1034 Query: 176 MLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLAL 235 L + DR++E R + + V + V A + HR L Sbjct: 1035 QLREHTTTGFLDRITERYRTYEDTDSNGVPDRITETVAVNGKATTLVHDTVQHRKT---L 1091 Query: 236 VSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEESGLYYNRHR--------- 286 S +G T YD L +R+PG D+ G Y R R Sbjct: 1092 TSPQGRTVTSF-YDPH---------TLLTTDLRVPG-YLDKSFG-YDTRGRPTSIVIGER 1139 Query: 287 ----YYDPLQGRYITQ-DPIGLKGGWNFYQYPLNPVQYIDSMGLASKYGHLNNGGYGARP 341 YD QGR + DP G Y + V G++ G Y Sbjct: 1140 ETKLAYD-DQGRLGSVTDP-----GNRTTSYAYDAVGRT--TGVSRPDGSTIGFSYDLNG 1191 Query: 342 NKPPTPDPSKLPDIAKQLRLPYPIDQASSAPNVFKTFFRALSPYDYTLYCRKWVKPNLTC 401 N +P+ P + ++T Y Y R+ + Sbjct: 1192 NITVLANPAGTPHAFGY--------NRVNLNGSYQTPLSGSYLYSYD-RDRRLTRVLFPS 1242 Query: 402 TPQDDSQYPGMDTKTASDYLPQTNWPTTQLPPGYTCAEPYLFPDINKPDGPATA 455 + + Y + L + P + GY C+ FP+ G A Sbjct: 1243 GKEIRNVYEKAN-------LARVETPEGNIEYGYLCSGR--FPESINRGGEGIA 1287 >UniRef50_Q466C0 Putative uncharacterized protein n=1 Tax=Methanosarcina barkeri str. Fusaro RepID=Q466C0_METBF Length = 2096 Score = 185 bits (469), Expect = 3e-45, Method: Composition-based stats. Identities = 71/345 (20%), Positives = 109/345 (31%), Gaps = 35/345 (10%) Query: 5 NRIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDER------THRYHYDSQHRLVHYTR 58 N + Y Y D G + + + EGV D E T Y YD +RL Sbjct: 1590 NTTQVVSSYKYTLDAAGNRLKVDEQLAEGVESGDSELKESQLLTTTYGYDKLYRLTKVDY 1649 Query: 59 TQYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTW-----YGWDGDRLT 113 Y YD +G R++ T Q+ Y +D Sbjct: 1650 PSN----KTVSYKYDSMGNRISMTTNVDGIGSTISYKYDAADQLLQSGNISYSYDKKGNL 1705 Query: 114 TIQNDRTRIQTIYQPGSFTPLIRVE----TATGELAKTQRRSLADTLQQSGGEDGGSVVF 169 + + Y L V + D + G Sbjct: 1706 IKKRVNSTQFMSYSYDEANRLKNVSEFVSNTNTPKSSYNFEYDGDGNRIIKTTINGENAQ 1765 Query: 170 PPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHR 229 V ++ ++L + ++ + + L + + YH D Sbjct: 1766 STKYVLDINSALPQVLTESDTKNTTCYTYGTDLI---------SMTNSENAEYYYHYDGL 1816 Query: 230 GLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEESGLYYNRHRYYD 289 G +L ++G + YD +G + E + R G+Q D+E+GL Y R RYYD Sbjct: 1817 GSVRSLSDSKGIIKNTYLYDAFGQVQKEIGT--VDNEFRFTGEQMDDETGLIYLRARYYD 1874 Query: 290 PLQGRYITQDPIG----LKGGWNFYQY-PLNPVQYIDSMGLASKY 329 P GR+IT+D I N Y Y NPV +D G Sbjct: 1875 PSVGRFITKDVIKGRRVTTQSINRYVYTTNNPVNLVDLTGYCGDK 1919 Score = 109 bits (273), Expect = 2e-22, Method: Composition-based stats. Identities = 66/484 (13%), Positives = 137/484 (28%), Gaps = 64/484 (13%) Query: 13 YLYRYDRHGRLTEKTDLIPEGVIRTDD------------ERTHRYHYDSQHRLVHYTRTQ 60 Y YD R T+ + + D ++ RY Y+S ++LV T Sbjct: 1154 TSYDYDPLNRQVSVTNALGKTTRNKYDAIGNKISITNAYGKSTRYSYNSLNQLVKVTNAM 1213 Query: 61 YAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTW---------YGWDGDR 111 RY YD +G ++ + G+ SL+R+ VT Y G++ Sbjct: 1214 G----KVVRYNYDAVGNLISTTDENGHKINYGYDSLNRQVSVTDALRKTTRNKYDAVGNK 1269 Query: 112 LTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPP 171 ++ + Y S L++V A G + + ++ + + + +G + Sbjct: 1270 ISITNAYGKSTR--YSYNSLNQLVKVTDAMGGVVRYNYDAVGNLISTTDA-NGRKTNYGY 1326 Query: 172 VLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGL 231 + + + + + +R + G + ++ Y D Sbjct: 1327 DSLNR-----QVSITNALGKTTRNKYDAVGNKI--------SSTDANWRLTKYSYDSLNR 1373 Query: 232 PLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEESGLYYNRHRYYDPL 291 + + G YD GNL++ + + D + + Sbjct: 1374 LVKVTDAMGGVV-RYTYDAVGNLISTTDAKGHKTDYGYDS--LDRQVSIT---------- 1420 Query: 292 QGRYITQDPIGLKGGWNFYQYPLNPVQYIDSMGLASKYGHLNNGGYGARPNKPPTPDPSK 351 DP+G N Y N + D G + YG+ Sbjct: 1421 -------DPLGRTA-RNKYDAVGNKISSTDEDGKTTSYGYDVLNRLTKVSYPDDQKVSYN 1472 Query: 352 LPDIAKQLRLPYPIDQASSAPNVFKTFFRALSPYDYTLYCRKWVKPNLTCTPQDDSQYPG 411 + +L + + + L+P + N D + Sbjct: 1473 YDAVGNRLTMKDSHGTTAYKYDKLNRLLSVLNPDGQKVSYTYNKVGNRVKMTYPDGKTTS 1532 Query: 412 MDTKTASDYLPQTNWPTTQLPPGYTCAEPYLFPDINKPDGPATAGIDDLGEILAKMKQRT 471 + + + Y +N P+G T D L ++ + Sbjct: 1533 YSYDAVNRLIGVIDSDGHITSYSYAKNGN--LKTMNTPNGVKTEYSYDKANRLVELINKN 1590 Query: 472 SRGI 475 + + Sbjct: 1591 TTQV 1594 Score = 101 bits (250), Expect = 8e-20, Method: Composition-based stats. Identities = 48/283 (16%), Positives = 85/283 (30%), Gaps = 43/283 (15%) Query: 8 ARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDE------------RTHRYHYDSQHRLVH 55 A Y YD R T+ + + D R +Y YDS +RLV Sbjct: 1317 ANGRKTNYGYDSLNRQVSITNALGKTTRNKYDAVGNKISSTDANWRLTKYSYDSLNRLVK 1376 Query: 56 YTRTQYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSR---------KPQVTWYG 106 T RY YD +G ++ + + G+ SL R + Y Sbjct: 1377 VTDAMGG----VVRYTYDAVGNLISTTDAKGHKTDYGYDSLDRQVSITDPLGRTARNKYD 1432 Query: 107 WDGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGS 166 G+++++ D Y L +V + ++ + L + Sbjct: 1433 AVGNKISSTDEDGKTTS--YGYDVLNRLTKVSYPDDQKVSYNYDAVGNRLTMKDSHGTTA 1490 Query: 167 VVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHC 226 + L+RL S + D + S + P K Y Sbjct: 1491 YKYDK-----LNRLLSVLNPDGQ-KVSYTYNKVGNRVKMTY---------PDGKTTSYSY 1535 Query: 227 DHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRL 269 D + ++ ++G Y + GNL P+ ++ Sbjct: 1536 DAVNRLIGVIDSDGHIT-SYSYAKNGNLKTMNTPNGVKTEYSY 1577 Score = 81.4 bits (199), Expect = 7e-14, Method: Composition-based stats. Identities = 36/210 (17%), Positives = 60/210 (28%), Gaps = 27/210 (12%) Query: 13 YLYRYDRHGRLTEKTDLIPEGVIR------------TDDERTHRYHYDSQHRLVHYTRTQ 60 Y YD R TD + +D +T Y YD +RL + Sbjct: 1406 TDYGYDSLDRQVSITDPLGRTARNKYDAVGNKISSTDEDGKTTSYGYDVLNRLTKVSYPD 1465 Query: 61 YAEPLVESRYLYDPLGRRVAKRVWRRERDLTGW------MSLSRKPQVTWYGWD--GDRL 112 + Y YD +G R+ + L+ Q Y ++ G+R+ Sbjct: 1466 ----DQKVSYNYDAVGNRLTMKDSHGTTAYKYDKLNRLLSVLNPDGQKVSYTYNKVGNRV 1521 Query: 113 TTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPV 172 D Y + LI V + G + + L+ +G + Sbjct: 1522 KMTYPDGKTTS--YSYDAVNRLIGVIDSDGHITSYSY-AKNGNLKTMNTPNGVKTEYSYD 1578 Query: 173 LVQMLDRLESEILADRVSEESRRWLASCGL 202 L L ++ VS A+ Sbjct: 1579 KANRLVELINKNTTQVVSSYKYTLDAAGNR 1608 Score = 77.9 bits (190), Expect = 7e-13, Method: Composition-based stats. Identities = 53/481 (11%), Positives = 123/481 (25%), Gaps = 77/481 (16%) Query: 2 WPDNRIARDA-HYLYRYDRHGRLTEKTDLIPEGV------------IRTDDERTHRYHYD 48 W N + Y YD +G T+ + + YD Sbjct: 911 WELNETNQLGYTISYAYDENGNRISVTNENSKTTKLAYDANGNIIKTTNPLGYSKSMTYD 970 Query: 49 SQHRLVHYTRTQYAEP-----------------LVESRYLYDPLGRRVAKRVWRRERDLT 91 S++ L+ T + E+ + YD G+ + + ++ Sbjct: 971 SKNNLISQTDELRHKTSFEYDDNSNLIKSIDALGHETVFSYDKYGQVIGETDSNKKTATF 1030 Query: 92 GWMS-------LSRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGEL 144 + + + + + +D T + D + +Q + L+ + G+ Sbjct: 1031 SYNNNGDQITITDANGKTSAFTYDTVGRVTTKTDAKGNRYTFQYDALDNLLSITDPMGQT 1090 Query: 145 AKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTV 204 + + + + + E + L Q++ + ++ A L Sbjct: 1091 TSNKYDAAGNKISFTDAEGRLTKYSYDSLNQLVKVTNAM-----GGVVRYKYDAVGNLVS 1145 Query: 205 EQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQ 264 Y D +++ + G T +YD GN ++ N + Sbjct: 1146 TTDAKGHKTS---------YDYDPLNRQVSVTNALGKTT-RNKYDAIGNKISITNAYGKS 1195 Query: 265 QLIRLPGQQYDEESGLYYNRHRYYDPLQGRYITQDPIGLKGGWNFYQY--PLNPVQYIDS 322 + L G Y Y N + D Sbjct: 1196 TRYSYN-----SLNQLVKVT-----------------NAMGKVVRYNYDAVGNLISTTDE 1233 Query: 323 MGLASKYGHLNNGGYGARPNKPPTPDPSKLPDIAKQLRLPYPIDQASSAP-NVFKTFFRA 381 G YG+ + + + +K + ++ + +++ N + Sbjct: 1234 NGHKINYGYDSLNRQVSVTDALRKTTRNKYDAVGNKISITNAYGKSTRYSYNSLNQLVKV 1293 Query: 382 LSPYDYTLYCRKWVKPNLTCTPQDDSQYPGMDTKTASDYLPQTNWPTTQLPPGYTCAEPY 441 + NL T + + + + + TN Y Sbjct: 1294 TDAMGGVVRYNYDAVGNLISTTDANGRKTNYGYDSLNRQVSITNALGKTTRNKYDAVGNK 1353 Query: 442 L 442 + Sbjct: 1354 I 1354 Score = 76.0 bits (185), Expect = 3e-12, Method: Composition-based stats. Identities = 55/442 (12%), Positives = 108/442 (24%), Gaps = 48/442 (10%) Query: 13 YLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYLY 72 + Y YD G L + + Y YD H + T + P+ Y Sbjct: 817 WSYSYDDQGNLIQ---------CKNPIGGKLSYTYDENHWMTSITDPRGNHPMKN---TY 864 Query: 73 DPLGRRVAKRVWRRERDLTGWMSLSRKPQVT-------WYGWDGDRLTTIQNDRTRIQTI 125 D G +++ + S +RK T Y +D + ++ Sbjct: 865 DEKGHVISQSNSLNATYTFNYDSENRKTTETDPFGKNKTYSFDEHFWELNETNQLGYTIS 924 Query: 126 YQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGED-------GGSVVFPPVLVQMLD 178 Y I V + K + + ++ + ++ Sbjct: 925 YAYDENGNRISVTNENSKTTKLAYDANGNIIKTTNPLGYSKSMTYDSKNNLISQTDELRH 984 Query: 179 RLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVST 238 + E + +S L + Q+ +K + ++ G + + Sbjct: 985 KTSFEYDDNSNLIKSIDALGHETVFSYDKYGQVIGETDSNKKTATFSYNNNGDQITITDA 1044 Query: 239 EGATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEESGLYYNRHRYYDPLQGRYITQ 298 G YD G + YD L Sbjct: 1045 NGK-TSAFTYDTVGRVT--TKTDAKGNRYTFQ-----------------YDALDNLLSIT 1084 Query: 299 DPIGLKGGWNFYQYPLNPVQYIDSMGLASKYGHLNNGGYGARPNKPPTPDPSKLPDIAKQ 358 DP+G N Y N + + D+ G +KY + + N K + Sbjct: 1085 DPMGQTTS-NKYDAAGNKISFTDAEGRLTKYSYDSLNQLVKVTNAMGGVVRYKYDAVGNL 1143 Query: 359 LRLPYPIDQASSAP-NVFKTFFRALSPYDYTLYCRKWVKPNLTCTPQDDSQYPGMDTKTA 417 + +S + + T + N + + Sbjct: 1144 VSTTDAKGHKTSYDYDPLNRQVSVTNALGKTTRNKYDAIGNKISITNAYGKSTRYSYNSL 1203 Query: 418 SDYLPQTNWPTTQLPPGYTCAE 439 + + TN + Y Sbjct: 1204 NQLVKVTNAMGKVVRYNYDAVG 1225 Score = 72.9 bits (177), Expect = 2e-11, Method: Composition-based stats. Identities = 41/252 (16%), Positives = 81/252 (32%), Gaps = 36/252 (14%) Query: 3 PDNRIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTR--TQ 60 +++ + + Y YD+ G L +K R + + Y YD +RL + + + Sbjct: 1685 AADQLLQSGNISYSYDKKGNLIKK---------RVNSTQFMSYSYDEANRLKNVSEFVSN 1735 Query: 61 YAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSL------------SRKPQVTWYGWD 108 P + YD G R+ K E + L S T Y + Sbjct: 1736 TNTPKSSYNFEYDGDGNRIIKTTINGENAQSTKYVLDINSALPQVLTESDTKNTTCYTYG 1795 Query: 109 GDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVV 168 D ++ ++ + Y + + + G + T +Q+ G Sbjct: 1796 TDLISMTNSENA--EYYYHYDGLGSVRSLSDSKGIIKNTYLYDAFGQVQKEIGTVDNEFR 1853 Query: 169 FPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDH 228 F + L + +R + S G + + + V T + ++Y + Sbjct: 1854 FTGEQMDDETGL--------IYLRARYYDPSVGRFITKDVIKGRRVTTQSINRYVYTTN- 1904 Query: 229 RGLPLALVSTEG 240 P+ LV G Sbjct: 1905 --NPVNLVDLTG 1914 Score = 41.7 bits (96), Expect = 0.057, Method: Composition-based stats. Identities = 35/290 (12%), Positives = 76/290 (26%), Gaps = 27/290 (9%) Query: 4 DNRIARDAH-YLYRY------DRHGRLTEKTDLIPEGVIRTDDERTHRY---HYDSQHRL 53 DNR + + Y D +G +T + + T+ +D + Sbjct: 683 DNRSGLFGSGWTFNYNMNLTVDNNGNVTVLGGDGHTDTYILNPDGTYSRPLSVFDDL--I 740 Query: 54 VHYTRTQYAEPLVESRYLYDPLG---RRVAKRVWRRERDLTGWMSL---SRKPQVTWYGW 107 + T +++Y + G V K + TG + + Sbjct: 741 KNSDETYTLTKKDQTKYNFSSEGKLVNIVDKNGNQINFTYTGEQLTKVTDASGRELILAY 800 Query: 108 DGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDG--- 164 D + D Y LI+ + G + Sbjct: 801 DHNGHIISITDPMGRVWSYSYDDQGNLIQCKNPIGGKLSYTYDENHWMTSITDPRGNHPM 860 Query: 165 -GSVVFPPVLVQMLDRLESEILADRVSEESRRWLASC-GLTVEQMQNQMDPVYTPARKIH 222 + ++ + L + + SE + G ++ ++ Sbjct: 861 KNTYDEKGHVISQSNSLNATYTFNYDSENRKTTETDPFGKNKTYSFDEHFWELNETNQLG 920 Query: 223 L---YHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRL 269 Y D G +++ + + YD GN++ NP + + Sbjct: 921 YTISYAYDENGNRISVTNEN-SKTTKLAYDANGNIIKTTNPLGYSKSMTY 969 >UniRef50_Q3JSF4 RhsD protein n=23 Tax=Burkholderia pseudomallei RepID=Q3JSF4_BURP1 Length = 1593 Score = 185 bits (469), Expect = 3e-45, Method: Composition-based stats. Identities = 82/345 (23%), Positives = 125/345 (36%), Gaps = 36/345 (10%) Query: 6 RIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHY-------TR 58 R Y YDR G L K + +R +D+ +LV + Sbjct: 1127 REGEYDGCYYAYDRVGNLIRKLGADEDLTLR----------WDAAGQLVETVSLRPVLAK 1176 Query: 59 TQYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVT---WYGWDGDRLTTI 115 + + Y YD RRV K V ++ +L T Y WD D L Sbjct: 1177 DAGHRVRIRAVYEYDAFQRRVRKVVDVKQDRHESPETLENASAPTHICRYFWDADTLIAE 1236 Query: 116 QNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQ 175 Y + PL+ + A T +++ + V +P Sbjct: 1237 ----------YGHDAEDPLLFLGDADASARPTLLHRDCVAVERPFRGNREWVYYPRTFQV 1286 Query: 176 MLDRLESEILAD-----RVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRG 230 + L + D +S + A G + + + + D G Sbjct: 1287 LAVALCCDPHRDDPNLASISANNVTGSAPLGAADAALSLIPAVPTLSGNRTYFFENDLNG 1346 Query: 231 LPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEESGLYYNRHRYYDP 290 P+ + G W A Y G + + E +QQ IRL GQ +D ESGL YNR+RY+ Sbjct: 1347 APVRIYDDCGRIVWEARYGPHGGIASIE-TDVIQQPIRLQGQIFDWESGLSYNRYRYFLS 1405 Query: 291 LQGRYITQDPIGLKGGWNFYQYPLNPVQYIDSMGLASKYGHLNNG 335 G +++QDPIGL GG N Y++ N + D +GL + NG Sbjct: 1406 SIGAFVSQDPIGLVGGVNLYRFAPNAFGWTDPLGLKKRKRKFVNG 1450 Score = 91.8 bits (226), Expect = 5e-17, Method: Composition-based stats. Identities = 43/296 (14%), Positives = 83/296 (28%), Gaps = 52/296 (17%) Query: 3 PDNRIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDD------------ERTHRYHYDSQ 50 P R+ + YD +G L +T V + R +Y +D + Sbjct: 630 PAGRV-----TTWEYDAYGNLLAQTLPDGSAVRAEYNADHKPVQVTDTSGRQRQYAWDER 684 Query: 51 HRLVHYTRTQYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQV-------T 103 + L+ Q + S+Y YD G+ V+ + ++ T Sbjct: 685 NNLLG----QISPTQASSQYGYDAHGQVVSHTGPCGAVTRFLYDHDGNLAEIVNALGHCT 740 Query: 104 WYGWDGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGED 163 Y +D + Y+ L R + + ++ Sbjct: 741 RYTYDARANVIETVSALGQVSRYEYDRNGNLTRAIEPGEREISCSYDADGNLVRYRDPNG 800 Query: 164 GGSVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHL 223 + + L Q+ RL R+ + ++ V +++L Sbjct: 801 HVTQLEYSPLSQITKRLLP-----GGGVVEYRYD---------TEERLVGVVNERGELYL 846 Query: 224 YHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEESG 279 + G + V G EY G++ +P GQ D E+ Sbjct: 847 LKRNAVGQIVEEVDYWGQLR-RYEYSARGDVQRSIDPL---------GQSIDYETD 892 Score = 85.2 bits (209), Expect = 5e-15, Method: Composition-based stats. Identities = 73/487 (14%), Positives = 128/487 (26%), Gaps = 61/487 (12%) Query: 2 WPDNRIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDER------------THRYHYDS 49 W D Y + YD R T TD + I +ER Y YD+ Sbjct: 564 WGD---KGLLDYRFVYDIERRETRITDSLGHSTILQANERGMPVARINPLGGVWSYRYDA 620 Query: 50 QHRLVHYTRTQYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVT------ 103 Q R T + + YD G +A+ + + + + QVT Sbjct: 621 QGRASAETDPAG----RVTTWEYDAYGNLLAQTLPDGSAVRAEYNADHKPVQVTDTSGRQ 676 Query: 104 -WYGWDGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGE 162 Y WD Q T+ + Y + ++ G + + L + Sbjct: 677 RQYAWDERNNLLGQISPTQASSQYGYDAHGQVVSHTGPCGAVTRFLYD-HDGNLAEIVNA 735 Query: 163 DGGSVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIH 222 G + + I + R+ + + + + + Sbjct: 736 LGHCTRYTYDAR------ANVIETVSALGQVSRYEYDRNGNLTRAIEPGEREISCS---- 785 Query: 223 LYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQYD----EES 278 D G + G EY + P R ++ E Sbjct: 786 ---YDADGNLVRYRDPNGHVT-QLEYSPLSQITKRLLPGGGVVEYRYDTEERLVGVVNER 841 Query: 279 GLYYNRHRYYDPLQGRYITQDPIGLKGGWNFYQYP--LNPVQYIDSMGLASKYGHLNNGG 336 G Y R G+ + + + G Y+Y + + ID +G + Y G Sbjct: 842 GELYLLKRN---AVGQIVEE--VDYWGQLRRYEYSARGDVQRSIDPLGQSIDYETDRLGR 896 Query: 337 YGARPNKPPTPDPSKLPDIAKQLRLPYPIDQASSAPNVFKTFFRALSPYDYTLYCRKWVK 396 + PD + R Y + + + Sbjct: 897 I-----VQKRIPDLRRPDRMRVERFEYDRGGNLVIAESPDSRVELSYDAAGRVVEERQGD 951 Query: 397 PNLTCTPQDDSQYPGMDTKTASDYLPQTNWPTTQLPPGYTCAEPYLFPDINKPDGPATAG 456 + T D G K + + T + GY + ++ P T Sbjct: 952 EFVIATAYD---AAGNRIKRQTRLNARGEIVTHTVRYGYDALDAVTSIQVDD-AAPITFE 1007 Query: 457 IDDLGEI 463 D LG+I Sbjct: 1008 RDALGQI 1014 Score = 72.9 bits (177), Expect = 3e-11, Method: Composition-based stats. Identities = 44/284 (15%), Positives = 70/284 (24%), Gaps = 36/284 (12%) Query: 10 DAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESR 69 Y DR GR+ +K + R D R R+ YD LV P Sbjct: 884 GQSIDYETDRLGRIVQKR---IPDLRRPDRMRVERFEYDRGGNLVIAE-----SPDSRVE 935 Query: 70 YLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRT-----RIQT 124 YD GR V +R T Y G+R+ Sbjct: 936 LSYDAAGRVVEERQGDEFVIA------------TAYDAAGNRIKRQTRLNARGEIVTHTV 983 Query: 125 IYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEI 184 Y + + ++ +R +L + G + + + Sbjct: 984 RYGYDALDAVTSIQVDDAAPITFERDALGQIRVEH---LGTELRRELSYTSEGLLAKQTL 1040 Query: 185 LADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEW 244 + + + + + + Y D G + G Sbjct: 1041 FSGTSPLFASEYAYDANGELLEKIDSRLGPER-------YQYDPMGRLTRHLDPAGKL-H 1092 Query: 245 CAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEESGLYYNRHRYY 288 YD G+LL Q + G Q D YY Sbjct: 1093 RFLYDPVGDLLTTRVGLVHQTSMSGQGPQADPWIREGEYDGCYY 1136 Score = 66.4 bits (160), Expect = 3e-09, Method: Composition-based stats. Identities = 44/252 (17%), Positives = 67/252 (26%), Gaps = 32/252 (12%) Query: 16 RYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYLYDPL 75 YD G ++ + T RY YD+ + A E D L Sbjct: 958 AYDAAGNRIKRQTRLNARGEIV--THTVRYGYDALDAVTSIQVDDAAPITFER----DAL 1011 Query: 76 GRRVAKRVWRRERDLTGWMSLSRKPQVT-----------WYGWDGDRLTTIQNDRTRIQT 124 G+ + + R + S + T Y +D + + D Sbjct: 1012 GQIRVEHLGTELRRELSYTSEGLLAKQTLFSGTSPLFASEYAYDANGELLEKIDSRLGPE 1071 Query: 125 IYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEI 184 YQ L R G+L + + D L G + + E E Sbjct: 1072 RYQYDPMGRLTRHLDPAGKLHRFLYDPVGDLLTTRVGLVHQTSMSGQGPQADPWIREGEY 1131 Query: 185 L-----ADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTE 239 DRV R+ A LT+ R + HR A+ Sbjct: 1132 DGCYYAYDRVGNLIRKLGADEDLTLRWDAAGQLVETVSLRPVLAKDAGHRVRIRAV---- 1187 Query: 240 GATEWCAEYDEW 251 EYD + Sbjct: 1188 ------YEYDAF 1193 Score = 61.4 bits (147), Expect = 7e-08, Method: Composition-based stats. Identities = 48/304 (15%), Positives = 90/304 (29%), Gaps = 39/304 (12%) Query: 15 YRYDRHGRLTEKTDLIPEG----------VIRTDDERTHRYHYDSQHR---LVHYTRTQY 61 Y +DR+G L + + + ++R R ++Y+ Q + Sbjct: 506 YAHDRNGDLVAALNAMSQPHHFAYTDGHRMVRHTSARGVSFYYNHQQHDDGVWRVDHAWG 565 Query: 62 AEPLVESRYLYDPLGR--RVAKRVWRRERDLTGWMSL-----SRKPQVTWYGWDGDRLTT 114 + L++ R++YD R R+ + + + V Y +D + Sbjct: 566 DKGLLDYRFVYDIERRETRITDSLGHSTILQANERGMPVARINPLGGVWSYRYDAQGRAS 625 Query: 115 IQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLV 174 + D T ++ ++ L+ G + + + Q G + Sbjct: 626 AETDPAGRVTTWEYDAYGNLLAQTLPDGSAVRAEYNA-DHKPVQVTDTSGRQRQYAWDER 684 Query: 175 QML------DRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHL--YHC 226 L + S+ D + +T + + H Y Sbjct: 685 NNLLGQISPTQASSQYGYDAHGQVVSHTGPCGAVTRFLYDHDGNLAEIVNALGHCTRYTY 744 Query: 227 DHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEESGLYYNRHR 286 D R + VS G EYD GNL P + + D + L R Sbjct: 745 DARANVIETVSALGQ-VSRYEYDRNGNLTRAIEPGEREISCSY-----DADGNLV----R 794 Query: 287 YYDP 290 Y DP Sbjct: 795 YRDP 798 >UniRef50_B3PEK8 RHS Repeat family n=1 Tax=Cellvibrio japonicus Ueda107 RepID=B3PEK8_CELJU Length = 2245 Score = 185 bits (469), Expect = 4e-45, Method: Composition-based stats. Identities = 79/403 (19%), Positives = 128/403 (31%), Gaps = 65/403 (16%) Query: 1 MWPDNRIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQ 60 +WPDN Y YD R+ D + G ++ D Y YD L T Sbjct: 1755 VWPDNY-----TVKYVYDALNRI----DQVNAGSLKLAD-----YDYDDLGNLDKVTYGN 1800 Query: 61 Y----------------------AEPLVESRYLYDPLGRRVAKR------VWRRERDLTG 92 V+ Y ++ + ++ WR Sbjct: 1801 GAVSDYQIQKDGDLDFIEHKFVGGSNNVKYTYSFNTAAQLISTSLSNRSFHWRAPSTTEK 1860 Query: 93 WMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGE-----LAKT 147 +++ Q T G N T +Q + L++ +A Sbjct: 1861 LYGVNKLNQYTSVGGVAFNYDKAGNLTTGQLGTFQYDAENRLLQANIGAAGPQGALVANY 1920 Query: 148 QRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQM 207 + Q++ + G S + + D +E A+ S S+R++ + Sbjct: 1921 TYDANGRRTQKTVVKGGVSTI--TDYLSDGDHEIAEYAAN-TSTPSKRFIYGKN-----V 1972 Query: 208 QNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWC--AEYDEWGNLLNEENPHQLQQ 265 + A H +H+G +A+ + G Y +G + + Sbjct: 1973 DEIIAMQDVAANTYSYAHRNHQGSVIAVSNASGQVTSNNIYTYSPYGEVNSAAG-----F 2027 Query: 266 LIRLPGQQYDEESGLYYNRHRYYDPLQGRYITQDPIGLKGGWNFYQYPLN-PVQYIDSMG 324 R G++ D E+GLYY R RYYDP GR++ DPIG K N Y Y N P+ ID G Sbjct: 2028 PFRYTGRRLDPETGLYYYRARYYDPGLGRFLQTDPIGYKDQMNLYAYVGNDPLNKIDPTG 2087 Query: 325 LASKYGHLNNGGYGARPNKPPTPDPSKLPDIAKQLRLPYPIDQ 367 +K L R ++ L Q Sbjct: 2088 KNAKKPFLKEAAKELRKEAKR--QIKNAKAQGRREALKQERQQ 2128 Score = 58.7 bits (140), Expect = 4e-07, Method: Composition-based stats. Identities = 36/314 (11%), Positives = 70/314 (22%), Gaps = 51/314 (16%) Query: 10 DAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHY---------------DSQHRLV 54 H YD +G LT T P+G + T Y D + Sbjct: 1414 VRHIALTYDSYGNLTNYTVQKPDGS----GKITTTAEYNDAVYGNIGNVSKLTDPNGNVT 1469 Query: 55 HYTRT-------QYAEPLVESRYLYDPLGR----------RVAKRVWRRERDLTGWMSLS 97 ++ ++ + Y G+ R ++ Sbjct: 1470 RAQYNADRSLKFRWDAQNTKTTFGYTLGGQLNSILVDGNARTSEVTAGYNPLGWMVWLKD 1529 Query: 98 RKPQVTWYGWDGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQR-RSLADTL 156 ++ +D L D Y LI G + + L Sbjct: 1530 ADGDTQYFDYDARGLLEKSTDPMGRARRYDYNRAGQLICQRDGWGTGLQRTYKHLQYNAL 1589 Query: 157 QQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSEESRRWLASC---GLTVEQMQNQMDP 213 + V ++ + + + + + G+T EQ + Sbjct: 1590 GLVTAYNSADSDPNSDCVLDNTNKQTTVQYNAYGQLWKTTFPNESPHGITYEQFEYWPGG 1649 Query: 214 -----VYTPARKIHLYHCDHRGLPLAL---VSTEGA---TEWCAEYDEWGNLLNEENPHQ 262 V + + + P + G+ T YD +G Sbjct: 1650 GVKTKVNRRGETVSYTYKNSNANPSLVDVKTVGAGSSLYTVNYTSYDVFGKPTAISQTGL 1709 Query: 263 LQQLIRLPGQQYDE 276 + D Sbjct: 1710 NPNTLTFTYDYADR 1723 Score = 54.4 bits (129), Expect = 9e-06, Method: Composition-based stats. Identities = 32/265 (12%), Positives = 62/265 (23%), Gaps = 39/265 (14%) Query: 12 HYLYR-YDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHR-LVHYTRTQYAEPLVESR 69 Y YD G+ T + + T + YD R + ++ + +V Sbjct: 1689 TVNYTSYDVFGKPTAISQTGL-------NPNTLTFTYDYADRGVTESSQKIGSSGVVRKV 1741 Query: 70 Y-LYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQP 128 YD G R + Y +D N + Y Sbjct: 1742 INRYDAAGNR--------------SEIVWPDNYTVKYVYDALNRIDQVNAGSLKLADYDY 1787 Query: 129 GSFTPLIRVETATGELAKT--QRRSLADTLQQSGGEDGGSVVFPPVLVQ----------- 175 L +V G ++ Q+ D ++ +V + Sbjct: 1788 DDLGNLDKVTYGNGAVSDYQIQKDGDLDFIEHKFVGGSNNVKYTYSFNTAAQLISTSLSN 1847 Query: 176 --MLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPL 233 R S + ++ + G+ + + + Sbjct: 1848 RSFHWRAPSTTEKLYGVNKLNQYTSVGGVAFNYDKAGNLTTGQLGTFQYDAENRLLQANI 1907 Query: 234 ALVSTEGATEWCAEYDEWGNLLNEE 258 +GA YD G + Sbjct: 1908 GAAGPQGALVANYTYDANGRRTQKT 1932 Score = 50.6 bits (119), Expect = 1e-04, Method: Composition-based stats. Identities = 32/255 (12%), Positives = 62/255 (24%), Gaps = 31/255 (12%) Query: 10 DAHYLY-RYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVES 68 D Y YD G L + TD + R RY Y+ +L+ + ++ Sbjct: 1531 DGDTQYFDYDARGLLEKSTDPM---------GRARRYDYNRAGQLI--CQRDGWGTGLQR 1579 Query: 69 RY---LYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQN-----DRT 120 Y Y+ LG + + D L + T ++ Sbjct: 1580 TYKHLQYNALG--LVTAYNSADSDPNSDCVLDNTNKQTTVQYNAYGQLWKTTFPNESPHG 1637 Query: 121 RIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRL 180 ++ + GE ++ + G+ + + Sbjct: 1638 ITYEQFEYWPGGGVKTKVNRRGETVSYTYKNSNANPSLVDVKTVGAGSSLYTVNYTSYDV 1697 Query: 181 ESEILADRVS-----EESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLAL 235 + A + + + + E Q D G + Sbjct: 1698 FGKPTAISQTGLNPNTLTFTYDYADRGVTESSQKIGSSGVVRKVINRY---DAAGNRSEI 1754 Query: 236 VSTEGATEWCAEYDE 250 V + T YD Sbjct: 1755 VWPDNYTV-KYVYDA 1768 >UniRef50_B8FIJ1 YD repeat protein n=1 Tax=Desulfatibacillum alkenivorans AK-01 RepID=B8FIJ1_DESAA Length = 1630 Score = 185 bits (469), Expect = 4e-45, Method: Composition-based stats. Identities = 68/350 (19%), Positives = 112/350 (32%), Gaps = 44/350 (12%) Query: 15 YRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRT------QYAEPLVES 68 Y YD G + + ++ YD+ RL + R + P E Sbjct: 1119 YGYDHEGNRLY-------ALRTDMAALSQQFTYDNAQRLTEFRRGPPNDSHEIPSPDFEK 1171 Query: 69 RYLYDPLGRRVAKRVWRRERDLTGWMSLSRKP-QVTWYGWDGDRLTTIQNDRTRIQTIYQ 127 + D LG + + T + T Y +D + Y Sbjct: 1172 DWTLDSLGNWTSVTTNSVTENRTPNVMSQYTDVGGTSYSYDSNGNLINDG-----VYTYT 1226 Query: 128 PGSFTPLIRVETATGEL--AKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEIL 185 L +V + A+ +L +++ G ++ I Sbjct: 1227 YDYENQLTKVTRNSDSQVMAEFTVDALNRRVKKVAGGVTTEYIYD---------DSRVIE 1277 Query: 186 ADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWC 245 + ++ L + ++ YH D G +AL + GA Sbjct: 1278 EKVSGVVTAHYVYGMRLDEPVLMHRGVQDL-------YYHADVLGSTIALTDSTGAVVET 1330 Query: 246 AEYDEWGNLLNEENPHQL------QQLIRLPGQQYDEESGLYYNRHRYYDPLQGRYITQD 299 Y +G + + GQ+YDEE+GLYY R RY P GR++ D Sbjct: 1331 YRYTPYGQVSFFDGNGSSISQSNESNPFLFTGQRYDEETGLYYYRARYLHPELGRFLNPD 1390 Query: 300 PIGLKGGWNFYQYP-LNPVQYIDSMGLASKYGHLNNGGYGARPNKPPTPD 348 P G G N Y+Y NP +Y+D G A++ + + K PD Sbjct: 1391 PKGFVDGMNLYEYAMSNPARYVDPRGTATEECSGASFSFDGALLKKYLPD 1440 Score = 90.3 bits (222), Expect = 1e-16, Method: Composition-based stats. Identities = 38/267 (14%), Positives = 80/267 (29%), Gaps = 24/267 (8%) Query: 9 RDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVES 68 H + YD +G TD T + YD + R T + + Sbjct: 555 DGNHQTFTYDGNGNRVTSTD---------PRGATTTFTYDVEGRKTSITDSLGNS----T 601 Query: 69 RYLYDPLGRRVAKRVWRRERDLTGWM------SLSRKPQVTWYGWDGDRLTTIQNDRTRI 122 + YD LG + + R + +++ T + +D + D Sbjct: 602 TFTYDVLGNVLTETDPRGNTKTWTYNDRKQKETVTDAFGTTSFTYDPMGRKLTKVDARGK 661 Query: 123 QTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLES 182 + Y L+ G + + + ++ + GED + + + Sbjct: 662 KWSYTYDLVGNLLTESDPLGNTVSYEYDGVRNRIKTTDGEDNVTYYEYDAVGNQTKVIIK 721 Query: 183 EILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGAT 242 D ++E + Q ++ +P+ + ++ D R + ++ G Sbjct: 722 ITDTDPEADEDDIVSTRVFNCIGQRISETNPL----DETTIFDYDFRNNVITETNSLGEI 777 Query: 243 EWCAEYDEWGNLLNEENPHQLQQLIRL 269 + YDE GN L+ Sbjct: 778 KA-YSYDENGNKLSFTTVTGNVIQYTY 803 Score = 87.9 bits (216), Expect = 7e-16, Method: Composition-based stats. Identities = 64/458 (13%), Positives = 126/458 (27%), Gaps = 56/458 (12%) Query: 13 YLYRYDRHGR------------LTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQ 60 Y Y +D +G LTE + + I + Y Y+ +++ T Sbjct: 369 YTYYFDSNGNVTKSVLPDGTEILTEISANVWPSKITDGNGGETTYTYNGYGQILTETDAL 428 Query: 61 YAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRK--------PQVTWYGWDGDRL 112 + Y YDP+ +++A + R T S T + W+ Sbjct: 429 G----YVTTYTYDPVFQKIATKTDARGNTWTNTYDGSGNLIELRDPLSCTTTFTWNSAGQ 484 Query: 113 TTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPV 172 + D Y + GE + L + ++ Sbjct: 485 MLTRTDGENNTWTYTYDDAGNQTSITNPDGEQSTFTYDDLGRMVTKTDFRGNT-----WT 539 Query: 173 LVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLP 232 L ++I + ++ + + +T D G Sbjct: 540 TTYDLLSRVTDIEDPDGNHQTFTYDGNGNRVTSTDPRGATTTFT---------YDVEGRK 590 Query: 233 LALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRLP-GQQYDEESGLYYNRHRYYDPL 291 ++ + G + YD GN+L E +P + +Q + + + YDP Sbjct: 591 TSITDSLGNST-TFTYDVLGNVLTETDPRGNTKTWTYNDRKQKETVTDAFGTTSFTYDP- 648 Query: 292 QGRYITQDPIGLKGGWNFYQY--PLNPVQYIDSMGLASKY---GHLNNGGYGARPNKPPT 346 GR +T+ + +G Y Y N + D +G Y G N + Sbjct: 649 MGRKLTK--VDARGKKWSYTYDLVGNLLTESDPLGNTVSYEYDGVRNRIKTTDGEDNVTY 706 Query: 347 PDPSKLPDIAKQLRLPYPIDQASSAPNV--------FKTFFRALSPYDYTLYCRKWVKPN 398 + + + K + D + ++ +P D T + N Sbjct: 707 YEYDAVGNQTKVIIKITDTDPEADEDDIVSTRVFNCIGQRISETNPLDETTIFDYDFRNN 766 Query: 399 LTCTPQDDSQYPGMDTKTASDYLPQTNWPTTQLPPGYT 436 + + + L T + Y Sbjct: 767 VITETNSLGEIKAYSYDENGNKLSFTTVTGNVIQYTYD 804 Score = 75.6 bits (184), Expect = 4e-12, Method: Composition-based stats. Identities = 58/426 (13%), Positives = 105/426 (24%), Gaps = 67/426 (15%) Query: 10 DAHYLYRYDRHGRLTEKTDLIPEGVIRTDDER-----------THRYHYDSQHR-LVHYT 57 + YD G + +TD T ++R T + YD R L Sbjct: 598 GNSTTFTYDVLGNVLTETDPRGNTKTWTYNDRKQKETVTDAFGTTSFTYDPMGRKLTKVD 657 Query: 58 RTQYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQN 117 + Y YD +G + + Y +DG R Sbjct: 658 AR-----GKKWSYTYDLVGNLLTESDP--------------LGNTVSYEYDGVRNRIKTT 698 Query: 118 DRTRIQTIYQPGSFTPLIRV---------ETATGELAKTQRRSLADTLQQSGGEDGGSVV 168 D T Y+ + +V E ++ T+ + + + Sbjct: 699 DGEDNVTYYEYDAVGNQTKVIIKITDTDPEADEDDIVSTRVFNCIGQRISETNPLDETTI 758 Query: 169 FPPVLVQ--------MLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARK 220 F + + + + N++ V + Sbjct: 759 FDYDFRNNVITETNSLGEIKAYSYDENGNKLSFTTVTGNVIQYTYDKLNRLKTVGDTSGL 818 Query: 221 IHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEESGL 280 Y D G + +GA Y + + YDE L Sbjct: 819 FETYEYDANGNKTKITVADGA-YQTVTYTPFNKPETLTDARGNT-----TSYVYDEAYNL 872 Query: 281 YYNRHRY-------YDPLQGRYITQ-DPIGLKGGWNFYQYPLNPVQYIDSMGLASKYGHL 332 +R YD R I+ DP+ F V+ D G ++Y + Sbjct: 873 VKVTNRLGLVTTQEYDAAN-RLISVTDPLSHTASLEFDA-VGAMVKMTDDKGAETEYIYD 930 Query: 333 NNGGYGARPNKPPTPDPSKLPDIAKQLRLPYPIDQASSAPNVFKTFFRALSPYDYTLYCR 392 + G S D A ++ DQ + + ++ Y + Sbjct: 931 DAGRL-RVVEYADGSSKSVTYDGANRITSKT--DQNGTLIQYERDEVGRITARIYPDSSQ 987 Query: 393 KWVKPN 398 + Sbjct: 988 YDYTYD 993 Score = 73.7 bits (179), Expect = 1e-11, Method: Composition-based stats. Identities = 61/519 (11%), Positives = 111/519 (21%), Gaps = 93/519 (17%) Query: 10 DAHYLYRYDRHGRLTEKT-------------DLIPEGVIRTDDERTHRYHYDSQHRLVHY 56 + YD +G + T D ++ D R Y YD LV Sbjct: 241 GNSLTFTYDANGAMQTATSSASGRSLTFTVNDAGKIATVKDDLNRQWTYTYDLLDNLVSV 300 Query: 57 TRTQYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRK----------------- 99 + +Y YD V+ K Sbjct: 301 SDPLN----YSIKYTYDENHNLVSVVDKNGNTIWVITYDDDDKCTSYGRPGAIFYYEYFT 356 Query: 100 ---------PQVTWYGWDGDRLTTIQ---------------------NDRTRIQTIYQPG 129 Y +D + T D +T Y Sbjct: 357 GYTEKTDPLNNKYTYYFDSNGNVTKSVLPDGTEILTEISANVWPSKITDGNGGETTYTYN 416 Query: 130 SFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRL------ESE 183 + ++ A G + + + G + L L + Sbjct: 417 GYGQILTETDALGYVTTYTYDPVFQKIATKTDARGNTWTNTYDGSGNLIELRDPLSCTTT 476 Query: 184 ILADRVSEESRRWLASCGLTVEQMQNQMD--PVYTPARKIHLYHCDHRGLPLALVSTEGA 241 + + R + + + P + + D G + G Sbjct: 477 FTWNSAGQMLTRTDGENNTWTYTYDDAGNQTSITNPDGEQSTFTYDDLGRMVTKTDFRGN 536 Query: 242 TEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEESGLYYNRHRYYDPLQGRYITQDPI 301 W YD + + E+P Q G N +R + DP Sbjct: 537 -TWTTTYDLLSRVTDIEDPDGNHQTFTYDG-----------NGNRV--------TSTDPR 576 Query: 302 GLKGGWNFYQYPLNPVQYIDSMGLASKYGHLNNGGYGARPNKPPTPDPSKLPDIAKQLRL 361 G + Y DS+G ++ + + G + D ++ + Sbjct: 577 GATTTF-TYDVEGRKTSITDSLGNSTTFTYDVLGNVLTETDPRGNTKTWTYNDRKQKETV 635 Query: 362 PYPIDQASSAPNVFKTFFRALSPYDYTLYCRKWVKPNLTCTPQDDSQYPGMDTKTASDYL 421 S + + + NL + + + Sbjct: 636 TDAFGTTSFTYDPMGRKLTKVDARGKKWSYTYDLVGNLLTESDPLGNTVSYEYDGVRNRI 695 Query: 422 PQTNWPTTQLPPGYTCAEPYLFPDINKPDGPATAGIDDL 460 T+ Y I D A DD+ Sbjct: 696 KTTDGEDNVTYYEYDAVGNQTKVIIKITDTDPEADEDDI 734 Score = 69.8 bits (169), Expect = 2e-10, Method: Composition-based stats. Identities = 42/296 (14%), Positives = 83/296 (28%), Gaps = 33/296 (11%) Query: 8 ARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHR------------YHYDSQHRLVH 55 AR + Y YD G L ++D + V D +R Y YD+ Sbjct: 658 ARGKKWSYTYDLVGNLLTESDPLGNTVSYEYDGVRNRIKTTDGEDNVTYYEYDAVGNQTK 717 Query: 56 Y------TRTQYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWM-------SLSRKPQV 102 T + E + S +++ +G+R+++ E + + + ++ Sbjct: 718 VIIKITDTDPEADEDDIVSTRVFNCIGQRISETNPLDETTIFDYDFRNNVITETNSLGEI 777 Query: 103 TWYGWDGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGE 162 Y +D + T Y L V +G + + + + + + Sbjct: 778 KAYSYDENGNKLSFTTVTGNVIQYTYDKLNRLKTVGDTSGLFETYEYDANGNKTKITVAD 837 Query: 163 DGGSVVF-------PPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVY 215 V + + + L N++ V Sbjct: 838 GAYQTVTYTPFNKPETLTDARGNTTSYVYDEAYNLVKVTNRLGLVTTQEYDAANRLISVT 897 Query: 216 TPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRLPG 271 P D G + + +GA YD+ G L E + + G Sbjct: 898 DPLSHTASLEFDAVGAMVKMTDDKGAET-EYIYDDAGRLRVVEYADGSSKSVTYDG 952 Score = 69.5 bits (168), Expect = 3e-10, Method: Composition-based stats. Identities = 37/299 (12%), Positives = 68/299 (22%), Gaps = 41/299 (13%) Query: 5 NRIARDAHY-----LYRYDRHGRLTEKTDLIP------------EGVIRTDDERTHRYHY 47 NR+ Y YD +G T+ T + T Y Y Sbjct: 807 NRLKTVGDTSGLFETYEYDANGNKTKITVADGAYQTVTYTPFNKPETLTDARGNTTSYVY 866 Query: 48 DSQHRLVHYTRTQYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLS-------RKP 100 D + LV T E YD R ++ + ++ K Sbjct: 867 DEAYNLVKVTNRLGLVTTQE----YDAANRLISVTDPLSHTASLEFDAVGAMVKMTDDKG 922 Query: 101 QVTWYGWDGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSG 160 T Y +D + + G L + +R + + Sbjct: 923 AETEYIYDDAGRLRVVEYADGSSKSVTYDGANRITSKTDQNGTLIQYERDEVG-RITARI 981 Query: 161 GEDGGSVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARK 220 D + + L + ++ ++ + S D + Sbjct: 982 YPDSSQYDYTYDELGRLLTATNNYGTVTMTYDAAGRILSADQAGTVTTYSSDVISRTRTI 1041 Query: 221 IH---------LYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRLP 270 + D GAT +YD + + L+ Sbjct: 1042 NYSSGVSVVEAYTLRDKLESVGY---EGGATIASWDYDSVSRPITRTLGNGLEIEYSYN 1097 Score = 60.6 bits (145), Expect = 1e-07, Method: Composition-based stats. Identities = 30/214 (14%), Positives = 56/214 (26%), Gaps = 25/214 (11%) Query: 16 RYDRHGRLTEKTDLIPE------------GVIRTDDERTHRYHYDSQHRLVHYTRTQYAE 63 YD R+T KTD D + Y YD RL+ T Sbjct: 949 TYDGANRITSKTDQNGTLIQYERDEVGRITARIYPDSSQYDYTYDELGRLLTAT-----N 1003 Query: 64 PLVESRYLYDPLGRRVAKRVWRRERDL-------TGWMSLSRKPQVTWYGWDGDRLTTIQ 116 YD GR ++ T ++ S V D+L ++ Sbjct: 1004 NYGTVTMTYDAAGRILSADQAGTVTTYSSDVISRTRTINYSSGVSVVEAYTLRDKLESVG 1063 Query: 117 NDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQM 176 + + S + I G + + S G + + Sbjct: 1064 YEGGATIASWDYDSVSRPITRTLGNGLEIEYSYNQIGWITGISHKSAGSEFL-GALYGYD 1122 Query: 177 LDRLESEILADRVSEESRRWLASCGLTVEQMQNQ 210 + L ++ S+++ + + + Sbjct: 1123 HEGNRLYALRTDMAALSQQFTYDNAQRLTEFRRG 1156 Score = 56.0 bits (133), Expect = 3e-06, Method: Composition-based stats. Identities = 47/407 (11%), Positives = 97/407 (23%), Gaps = 49/407 (12%) Query: 44 RYHYDSQHRLVHYTRTQYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMS-------- 95 Y +++Q L + YD G R LT ++ Sbjct: 224 SYLFNAQGNLDKVEDILGNS----LTFTYDANGAMQTATSSASGRSLTFTVNDAGKIATV 279 Query: 96 LSRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADT 155 + Y +D +D Y L+ V G D Sbjct: 280 KDDLNRQWTYTYDLLDNLVSVSDPLNYSIKYTYDENHNLVSVVDKNGNTIWVITYDDDDK 339 Query: 156 LQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVY 215 S G G + +E ++ + + ++ +T + + + + Sbjct: 340 CT-SYGRPGAIFYYEYFTGY------TEKTDPLNNKYTYYFDSNGNVTKSVLPDGTEILT 392 Query: 216 TPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQYD 275 + + P + G Y+ +G +L E + Sbjct: 393 EISANVW---------PSKITDGNGGET-TYTYNGYGQILTETDALGYVTTYT------- 435 Query: 276 EESGLYYNRHRYYDPLQGRYITQDPIGLKGGWNFYQYPLNPVQYIDSMGLASKYGHLNNG 335 YDP+ + T+ N Y N ++ D + + + + G Sbjct: 436 ------------YDPVFQKIATKTDARGNTWTNTYDGSGNLIELRDPLSCTTTFTWNSAG 483 Query: 336 GYGARPNKPPTPDPSKLPDIAKQLRLPYPIDQASS-APNVFKTFFRALSPYDYTLYCRKW 394 R + D Q + P + S+ + T Sbjct: 484 QMLTRTDGENNTWTYTYDDAGNQTSITNPDGEQSTFTYDDLGRMVTKTDFRGNTWTTTYD 543 Query: 395 VKPNLTCTPQDDSQYPGMDTKTASDYLPQTNWPTTQLPPGYTCAEPY 441 + +T D + + + T+ Y Sbjct: 544 LLSRVTDIEDPDGNHQTFTYDGNGNRVTSTDPRGATTTFTYDVEGRK 590 Score = 55.2 bits (131), Expect = 6e-06, Method: Composition-based stats. Identities = 37/241 (15%), Positives = 65/241 (26%), Gaps = 30/241 (12%) Query: 6 RIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPL 65 + Y YD +G L ++ + Y YD +++L TR ++ Sbjct: 1200 QYTDVGGTSYSYDSNGNLI--------------NDGVYTYTYDYENQLTKVTR--NSDSQ 1243 Query: 66 VESRYLYDPLGRRVAKRVWRRERDLTGWMSL-----SRKPQVTWYGWDGDRLTTIQNDRT 120 V + + D L RRV K + S Y + G RL Sbjct: 1244 VMAEFTVDALNRRVKKVAGGVTTEYIYDDSRVIEEKVSGVVTAHYVY-GMRLDEPVLMHR 1302 Query: 121 RIQTIYQ-PGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDR 179 +Q +Y I + +TG + +T R + + G + Sbjct: 1303 GVQDLYYHADVLGSTIALTDSTGAVVETYRYTPYGQVSFFDGNGSSISQSNESNPFLFTG 1362 Query: 180 LESEILADRVSEESRRWLASCGLTVEQ-----MQNQMDPVYTPARKIHLYHCDHRGLPLA 234 + +R G + + Y + D RG Sbjct: 1363 QRYDEETGLYYYRARYLHPELGRFLNPDPKGFVDGMNLYEYAMSNPARYV--DPRGTATE 1420 Query: 235 L 235 Sbjct: 1421 E 1421 >UniRef50_Q2Y592 Peptidase C39, bacteriocin processing n=1 Tax=Nitrosospira multiformis ATCC 25196 RepID=Q2Y592_NITMU Length = 1599 Score = 185 bits (468), Expect = 4e-45, Method: Composition-based stats. Identities = 71/366 (19%), Positives = 117/366 (31%), Gaps = 35/366 (9%) Query: 10 DAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESR 69 + Y +++ T+ +++ Y YD RL+ + Sbjct: 1175 ARGFHYATTPENQISTLTETAGGAA-----QKSWHYAYDGADRLLSAQPSSGGS----FS 1225 Query: 70 YLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQPG 129 Y YD + T S + Y +G+ +++D R YQ Sbjct: 1226 YGYDAADNLTSL-NGALTHYNTVNQLTSFNSESFSYDANGN----LKDDGVRT---YQWD 1277 Query: 130 SFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRV 189 + L+ + T R + + E+ G + + L A Sbjct: 1278 AENRLLSISYKNDPSKATTFRYDGMGRRLAIVENNGGAITETRHLWCGATLCQ---ARTA 1334 Query: 190 SEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPL-ALVSTEGATEWCAEY 248 + R G+ + Q + Y DH G + + GA +Y Sbjct: 1335 GDVVTRRYYPQGMAIPQ-----------GGTLLYYGTDHLGSVRDVMAAQNGAKVASYDY 1383 Query: 249 DEWGNLLNEENPHQLQQLIRLPGQQYDEESGLYYNRHRYYDPLQGRYITQDPIGLKGGWN 308 D +GN + + R G Y ++SGLY R YDP +++++DPIG KGG N Sbjct: 1384 DPYGNQIAGSGRISV--DFRYAGMFYHQQSGLYLTNFRAYDPKTAKWLSRDPIGEKGGLN 1441 Query: 309 FYQYP-LNPVQYIDSMGLASKYGHLNNGGYGARPNKPPTPDPSKLPDIAKQLRLPYPIDQ 367 Y Y NP+ ID +GL + L P K A + D Sbjct: 1442 LYGYVGGNPINMIDPLGLRALPWILGGASSDIATPDPSDIAWQKWAGWAILITGATIYDA 1501 Query: 368 ASSAPN 373 S Sbjct: 1502 CSGNSE 1507 Score = 86.4 bits (212), Expect = 2e-15, Method: Composition-based stats. Identities = 43/253 (16%), Positives = 75/253 (29%), Gaps = 33/253 (13%) Query: 10 DAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESR 69 Y YD GRL T+ D+ H + YD+ R+ T ++ Sbjct: 848 GQTTRYAYDGLGRLISITNP--------DNAVQHSFTYDAFDRVATATDSEGH----TLA 895 Query: 70 YLYDPLGRRVAKRVWRRERDLTGWMSLS------RKPQVTWYGWDGDRLTTIQNDRTRIQ 123 Y YD L R L + L R + T Y +D +R T D Sbjct: 896 YEYDALDRVTQILYPDGTSTLNTYDLLDLVETKDRMGRATSYSYDANRRMTSMTDPAGQT 955 Query: 124 TIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESE 183 T Y L + G + + + + + +D +++ + Sbjct: 956 TSYSYYRNGVLRSITDGNGNMTRWDIDIQSRPIAKVYADDSRETYAYDSASRLISVTD-- 1013 Query: 184 ILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHL--YHCDHRGLPLALVSTEGA 241 ++R++ + + + TP Y P T+GA Sbjct: 1014 -----ALGQTRQYGYTKDDRLAALSYANAISPTPGVSFAYDPYF------PRRTTMTDGA 1062 Query: 242 TEWCAEYDEWGNL 254 +Y G+L Sbjct: 1063 GTTQFQYGAVGSL 1075 Score = 68.7 bits (166), Expect = 4e-10, Method: Composition-based stats. Identities = 34/261 (13%), Positives = 66/261 (25%), Gaps = 39/261 (14%) Query: 8 ARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQH-RLVHYTRTQYAEPLV 66 + Y+ G R + Y S L +T + Sbjct: 757 GSTQARRFTYNSIG---------KPLTAIDPTGRKTSFTYASNDIDLTSIQQTTGSGQAT 807 Query: 67 ESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTIY 126 + + Y + + T Y ++ D T D T Y Sbjct: 808 LAAFTY--------------NSQHLPLTATDAAGKTTSYTYNSDGQVTGVTDALGQTTRY 853 Query: 127 QPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILA 186 LI + + + D + + +G ++ + LDR+ + Sbjct: 854 AYDGLGRLISITNPDNAVQHSFTYDAFDRVATATDSEGHTLAYEYDA---LDRVTQILYP 910 Query: 187 DRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWCA 246 D S + L T ++M Y R++ ++ G T Sbjct: 911 DGTSTLNTYDLLDLVETKDRMGRATSYSYDANRRM-----------TSMTDPAGQTT-SY 958 Query: 247 EYDEWGNLLNEENPHQLQQLI 267 Y G L + + + Sbjct: 959 SYYRNGVLRSITDGNGNMTRW 979 Score = 67.5 bits (163), Expect = 9e-10, Method: Composition-based stats. Identities = 39/265 (14%), Positives = 66/265 (24%), Gaps = 32/265 (12%) Query: 8 ARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVE 67 A D+ Y YD RL TD + +T +Y Y RL + P Sbjct: 993 ADDSRETYAYDSASRLISVTDAL---------GQTRQYGYTKDDRLAALSYANAISPTPG 1043 Query: 68 SRYLYDP-LGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTIY 126 + YDP RR S +LT T + Y Sbjct: 1044 VSFAYDPYFPRRTTMTDGAGTTQFQYGAVGSLG---------ALKLTGENGPYTNDEISY 1094 Query: 127 QPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILA 186 Q + + + ++ D + Q G ++L+ Sbjct: 1095 QYDALGRMT--SRKVDTITESFAYDRLDRVTQHTNPLGS-------FNFSYLGQTGQLLS 1145 Query: 187 DRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHC--DHRGLPLALVSTEGATEW 244 + +W ++++ + AR H + W Sbjct: 1146 QQAGAVGTQWGYEDNTHDRRLKSITNSGL--ARGFHYATTPENQISTLTETAGGAAQKSW 1203 Query: 245 CAEYDEWGNLLNEENPHQLQQLIRL 269 YD LL+ + Sbjct: 1204 HYAYDGADRLLSAQPSSGGSFSYGY 1228 Score = 49.4 bits (116), Expect = 3e-04, Method: Composition-based stats. Identities = 44/353 (12%), Positives = 76/353 (21%), Gaps = 35/353 (9%) Query: 114 TIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVL 173 + +D + + S + TG S L G Sbjct: 752 RVLDDGSTQARRFTYNSIGKPLTAIDPTGRKTSFTYASNDIDLTSIQQTTGSGQATLAAF 811 Query: 174 VQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPL 233 L S + + Q+ V + Y D G + Sbjct: 812 TYNSQHLPLTATDAAGKTTSYTYNSDG---------QVTGVTDALGQTTRYAYDGLGRLI 862 Query: 234 ALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEESGLYYNRHRYYDPL-Q 292 ++ + + A + YD + + + D + + Y P Sbjct: 863 SITNPDNAVQHSFTYDAFDRVATATDSEGHTLAYEYDA--LDRVTQILY-------PDGT 913 Query: 293 GRYITQDPIGLKGGWNF------YQYPLNP--VQYIDSMGLASKYGHLNNGGYGARPNKP 344 T D + L + Y Y N D G + Y + NG + + Sbjct: 914 STLNTYDLLDLVETKDRMGRATSYSYDANRRMTSMTDPAGQTTSYSYYRNGVLRSITDGN 973 Query: 345 PTPDPSKLPDIAKQLRLPYPIDQASSAPN-------VFKTFFRALSPYDYTLYCRKWVKP 397 + ++ + Y D + Y YT R Sbjct: 974 GNMTRWDIDIQSRPIAKVYADDSRETYAYDSASRLISVTDALGQTRQYGYTKDDRLAALS 1033 Query: 398 NLTCTPQDDSQYPGMDTKTASDYLPQTNWPTTQLPPGYTCA-EPYLFPDINKP 449 D TTQ G + N P Sbjct: 1034 YANAISPTPGVSFAYDPYFPRRTTMTDGAGTTQFQYGAVGSLGALKLTGENGP 1086 Score = 47.5 bits (111), Expect = 0.001, Method: Composition-based stats. Identities = 58/449 (12%), Positives = 106/449 (23%), Gaps = 56/449 (12%) Query: 37 TDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSL 96 ++YD+Q RLV T D GR L Sbjct: 531 DPSGNALTFNYDNQLRLVSLT---------------DATGRNTIFSYEFPANPLLVTGIT 575 Query: 97 SRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTL 156 + +D +R D I + ++ + + + T G T +++ + Sbjct: 576 DPFGRRAELTYDTNRRLASITDVIGITSSFKYDTGGLINEMTTPYGTHHFTYGQNIYENS 635 Query: 157 QQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSEESRR---WLASCGLTVEQMQNQMDP 213 + D + + + + + + Sbjct: 636 RFLEMTDPMGFTERLEFRHFASGIPNGDPVAPAGMGILNGFLYYRNTFHWDKHLYAITHT 695 Query: 214 VYTPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQ 273 YT AR IH H + G ++ + ++ + N I G+ Sbjct: 696 DYTQARIIHWLH-NPAGQTSPIIESSKQPLERRVWNTYPGQGNSIMEGTAGTPIA-IGRV 753 Query: 274 YDEESGLYYNRHRYYDPLQGRYITQDPIGLKGGWNFYQYPLNPVQYIDSMGLASKYGHLN 333 D+ S + R R+ Y P+ ID G + + + + Sbjct: 754 LDDGS----TQAR-------RFT-------------YNSIGKPLTAIDPTGRKTSFTYAS 789 Query: 334 NG------GYGARPNKPPTPDPSKLPDIAKQLRLPYPIDQASSAPNVFKTFFRALSPYDY 387 N + + S N Sbjct: 790 NDIDLTSIQQTTGSGQATLAAFTYNSQHLPLTATDAAGKTTSYTYNSDGQVTGVTDALGQ 849 Query: 388 TLYCRKWVKPNLTCTPQDDS-QYPGMDTKTASDYLPQTNWPTTQLPPGYTCAEPY---LF 443 T L D+ T+ L Y + L+ Sbjct: 850 TTRYAYDGLGRLISITNPDNAVQHSFTYDAFDRVATATDSEGHTLAYEYDALDRVTQILY 909 Query: 444 PDINKPDGPATAGIDDLGEILAKMKQRTS 472 PD T + DL E +M + TS Sbjct: 910 PD--GTSTLNTYDLLDLVETKDRMGRATS 936 Score = 42.5 bits (98), Expect = 0.036, Method: Composition-based stats. Identities = 18/187 (9%), Positives = 37/187 (19%), Gaps = 25/187 (13%) Query: 3 PDNRIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYA 62 + + D Y++D RL + + D + + YD R + Sbjct: 1262 ANGNLKDDGVRTYQWDAENRLLSIS-------YKNDPSKATTFRYDGMGRRLAIVENNGG 1314 Query: 63 EPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRI 122 + + + Y G I T + Sbjct: 1315 A---------------ITETRHLWCGATLCQARTAGDVVTRRYYPQG---MAIPQGGTLL 1356 Query: 123 QTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLES 182 + ++A + + SG Q + Sbjct: 1357 YYGTDHLGSVRDVMAAQNGAKVASYDYDPYGNQIAGSGRISVDFRYAGMFYHQQSGLYLT 1416 Query: 183 EILADRV 189 A Sbjct: 1417 NFRAYDP 1423 >UniRef50_B4ETQ7 Putative Rhs-family protein n=3 Tax=Enterobacteriaceae RepID=B4ETQ7_PROMH Length = 380 Score = 184 bits (467), Expect = 6e-45, Method: Composition-based stats. Identities = 77/336 (22%), Positives = 109/336 (32%), Gaps = 33/336 (9%) Query: 55 HYTRTQYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTT 114 TR A+ + Y YD GR K V R +P+ Y W+ T Sbjct: 12 RVTRRYTAKGYQD--YHYDVNGRLAKKIVHTR----------GFRPREWRYLWNTQNQLT 59 Query: 115 IQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLV 174 Y +F + + D L + + Sbjct: 60 ACFTPKGDCWHYTYDAFGRRLSKTKTVDSDL-----AHIDPLFPQIKPKITTWRYLWSGD 114 Query: 175 QMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLA 234 Q+++ + + +WL G + Q K+H DH+G P Sbjct: 115 QLIEETPIYADGTLANAQQVQWLYQPGEITPTARYQQ-------GKLHYVVTDHQGTPRE 167 Query: 235 LVSTEGATEWCAEYDEWGNL--------LNEENPHQLQQLIRLPGQQYDEESGLYYNRHR 286 + G W + WG + E +P+ + R GQ DEESGLYYNR R Sbjct: 168 IFCEGGQASWAGRLNTWGQMQFWRYRDGKAENDPNYTECPFRFAGQYEDEESGLYYNRFR 227 Query: 287 YYDPLQGRYITQDPIGLKGGWNFYQYPLNPVQYIDSMGLASKYGH-LNNGGYGARPNKPP 345 YYD G+Y++ DPIGL GG N Y Y P ++D GLA + G R K Sbjct: 228 YYDRETGQYLSPDPIGLLGGLNPYGYVHCPTGWVDPFGLACCPPPKIKATQIGLRNPKQI 287 Query: 346 TPDPSKLPDIAKQLRLPYPIDQASSAPNVFKTFFRA 381 + D LP N Sbjct: 288 DGMKKDMLDGTFDFSLPKNQVGGFVDSNGIYYMGEG 323 Score = 67.1 bits (162), Expect = 2e-09, Method: Composition-based stats. Identities = 44/239 (18%), Positives = 71/239 (29%), Gaps = 25/239 (10%) Query: 6 RIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPL 65 R + Y YD +GRL +K R R RY +++Q++L + Sbjct: 16 RYTAKGYQDYHYDVNGRLAKKI-----VHTRGFRPREWRYLWNTQNQLTACFTPKGD--- 67 Query: 66 VESRYLYDPLGRRVAKRVWRRERDLTGWMSLSR---KPQVTWYGWDGDRLTTIQ------ 116 Y YD GRR++K + K Y W GD+L Sbjct: 68 -CWHYTYDAFGRRLSKTKTVDSDLAHIDPLFPQIKPKITTWRYLWSGDQLIEETPIYADG 126 Query: 117 --NDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGG---EDGGSVVFPP 171 + ++Q +YQPG TP R + T + + GG G + Sbjct: 127 TLANAQQVQWLYQPGEITPTARYQQGKLHYVVTDHQGTPREIFCEGGQASWAGRLNTWGQ 186 Query: 172 VLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRG 230 + ++E + R N+ + D G Sbjct: 187 MQFWRYRDGKAENDPNYTECPFRFAGQYEDEESGLYYNRFRYYDRETGQ--YLSPDPIG 243 >UniRef50_C5CXA7 YD repeat protein n=1 Tax=Variovorax paradoxus S110 RepID=C5CXA7_VARPS Length = 1434 Score = 184 bits (466), Expect = 7e-45, Method: Composition-based stats. Identities = 81/353 (22%), Positives = 124/353 (35%), Gaps = 45/353 (12%) Query: 12 HYLYRYDRHGRLTEKTDLIPEGVIRTDD------------ERTHRYHYDSQH-------R 52 + YD G LT +TD + T D R Y D R Sbjct: 975 DTRFDYDAAGNLTRRTDSQQGNDLYTHDPMGRILSHVDPMGRVRHYLSDPAGDRLRTNVR 1034 Query: 53 LVHYTRTQYAEPLVE----------SRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQV 102 +V +T + E Y++D G ++ R ++ ++ Sbjct: 1035 IVAMAQTASGQQQPEHWTREGEHEGWHYVFDRAGNLTSRTQTRAPNQPALHLAWDTNQRL 1094 Query: 103 TWYGWDGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGE 162 T W + T Y + T Sbjct: 1095 TQSRW-------ERGPHHGEVTTYGYDPLGRRVFKRNTTHTTWFFWDGDALLGEACQENA 1147 Query: 163 DGGSVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMD------PVYT 216 PV + R + + L ++ +R ++ G + Sbjct: 1148 LVPKTKKSPVTSLLERRKQEDALRQLHAK-TREFVLKPGTFEPLALIDKEMPPSSVDTSE 1206 Query: 217 PARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQYDE 276 ++ YH D G PL + + +G W YD WG + ++ L Q IR GQQ D Sbjct: 1207 DTARVLHYHNDPDGRPLRMTTRDGQIVWAVRYDVWGGI-ARKDCELLAQPIRCQGQQEDA 1265 Query: 277 ESGLYYNRHRYYDPLQGRYITQDPIGLKGGWNFYQY-PLNPVQYIDSMGLASK 328 E+GL+YNRHRY+DP+ G Y++ DPIGL+GG N Y Y NP +ID +GLA+ Sbjct: 1266 ETGLFYNRHRYFDPIIGAYVSADPIGLRGGVNPYAYGCSNPYFWIDPLGLAAS 1318 Score = 78.3 bits (191), Expect = 6e-13, Method: Composition-based stats. Identities = 42/280 (15%), Positives = 70/280 (25%), Gaps = 48/280 (17%) Query: 12 HYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRT------------ 59 + YD G L V YDS +L+ Sbjct: 568 RTGFTYDARGNLLGVRHPDGSIVGCE---------YDSDDQLLAVIDPLGHRWEHASDAR 618 Query: 60 -----QYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLS-------RKPQVTWYGW 107 Q +R+ +D G+ V R + VT + + Sbjct: 619 GLPSSQTDPLGAVTRFEHDDRGQLVRHVNARGAVTQLRYDRYGLPAQMIDALTHVTRFDY 678 Query: 108 DGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSV 167 D Q + ++ Y + L R+ G + D L + E+G Sbjct: 679 DALGRLRTQVNALGQRSRYHCDAKGRLQRITQHDGAQLTCAYDAE-DRLVRYADENGAIT 737 Query: 168 VFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCD 227 ++ R + R+ + Q+ V P + H D Sbjct: 738 ELTYSGTGLIARRVQ------PDGHAVRYDYDS-------EEQLVAVVNPRGERHELTRD 784 Query: 228 HRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLI 267 G + + G YD G LL +P Sbjct: 785 PLGRIVEEIDYWGQCR-RFHYDASGRLLRSIDPMGRTISF 823 Score = 71.4 bits (173), Expect = 8e-11, Method: Composition-based stats. Identities = 36/240 (15%), Positives = 64/240 (26%), Gaps = 19/240 (7%) Query: 10 DAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQ--YAEPLVE 67 + YD GRL D + RT +H D+ R+ H T + P Sbjct: 797 GQCRRFHYDASGRLLRSIDPM---------GRTISFHTDAMGRITHKTWPEISGGAPAGA 847 Query: 68 SRYLYDPLGRRVAKRVWRRERDLTGWM-----SLSRKPQVTWYGWDGDRLTTIQNDRTRI 122 + YD GR V R + +D + + Sbjct: 848 EDFRYDAAGRLVEARNAHSHFKHRFDALGHLVEEQQGSFRIERAYDAAGNSVERKTSAGN 907 Query: 123 QTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLES 182 + + + +R +L + E + + + + Sbjct: 908 RVAVRYDLLNRPAEIAINDEPPITIERNALGQATAEHLSEHVVRTLRYNDQGLVAAQAVA 967 Query: 183 EILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIH-LYHCDHRGLPL-ALVSTEG 240 + + + + A+ LT Q + +YT L H D G L G Sbjct: 968 K-DGAPLFDTRFDYDAAGNLTRRTDSQQGNDLYTHDPMGRILSHVDPMGRVRHYLSDPAG 1026 Score = 67.1 bits (162), Expect = 1e-09, Method: Composition-based stats. Identities = 42/269 (15%), Positives = 74/269 (27%), Gaps = 41/269 (15%) Query: 13 YLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYLY 72 + YD GRL + + + + RYH D++ RL T+ A + Y Sbjct: 674 TRFDYDALGRLRTQVNAL---------GQRSRYHCDAKGRLQRITQHDGA----QLTCAY 720 Query: 73 DPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQPGSFT 132 D R V +T + G L + Y S Sbjct: 721 DAEDRLVR--------------YADENGAITELTYSGTGLIARRVQPDGHAVRYDYDSEE 766 Query: 133 PLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSEE 192 L+ V GE + R L +++ ++L ++ + Sbjct: 767 QLVAVVNPRGERHELTRDPLGRIVEEIDYWGQCRRFHYDASGRLLRSIDPMGRTISFHTD 826 Query: 193 SRRWL-----------ASCGLTVEQMQNQMDPVYTPARKIHLYHC-DHRGLPLALVSTEG 240 + + A G + V H H D G + +G Sbjct: 827 AMGRITHKTWPEISGGAPAGAEDFRYDAAGRLVEARNAHSHFKHRFDALGHLVEE--QQG 884 Query: 241 ATEWCAEYDEWGNLLNEENPHQLQQLIRL 269 + YD GN + + + +R Sbjct: 885 SFRIERAYDAAGNSVERKTSAGNRVAVRY 913 Score = 59.1 bits (141), Expect = 3e-07, Method: Composition-based stats. Identities = 71/470 (15%), Positives = 124/470 (26%), Gaps = 85/470 (18%) Query: 13 YLYRYDRHGRLTEKTDLIPEGVIR-----------TDDERTHRYHYDSQHRLVHYTRTQY 61 YR+ G L +D + + Y YD Q R+VH Sbjct: 444 VRYRH-ADGDLLAASDALGAAREFAYLQHRMARHTDRTGLSFHYAYDEQWRVVHAW---G 499 Query: 62 AEPLVESRYLYDPLGRRVAKR-------VWRRERDLTGWMSLSRKPQVTWYGWDGDRLTT 114 L + R+ Y R+ V + + + VT + +D T Sbjct: 500 DGGLHDYRFAYSAALRQTEVTNSLGHLTVVKFDEAGLPLAEIDPLDGVTTFEYDDVGRTV 559 Query: 115 IQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLV 174 ++T + + L+ V G + + S D L G Sbjct: 560 AVTAPGGLRTGFTYDARGNLLGVRHPDGSIVGCEYDS-DDQLLAVIDPLGHRWEHASDAR 618 Query: 175 QMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLA 234 + D + +R G V + + ++ D GLP Sbjct: 619 GLPSSQ-----TDPLGAVTRFEHDDRGQLVRHVNARGAVT-----QLRY---DRYGLPAQ 665 Query: 235 LVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEESGLYYNRHRYYDPLQGR 294 ++ +YD G L + N GQ R RY+ +GR Sbjct: 666 MIDALTHVT-RFDYDALGRLRTQVNAL---------GQ-----------RSRYHCDAKGR 704 Query: 295 YITQDPIGLKGGWNFY-QY-PLNP-VQYIDSMGLASKYGHLNNGGYGARPNKPPTPDPSK 351 + + I G Y + V+Y D G L G G + + Sbjct: 705 -LQR--ITQHDGAQLTCAYDAEDRLVRYADENG---AITELTYSGTGLIARRVQPDGHAV 758 Query: 352 LPDIAKQLRLPYPIDQASSAPNVFKTFFRAL-SPYDYTLYCRKWVKPNLTCTPQDDSQYP 410 D + +L ++ + + + DY CR++ Sbjct: 759 RYDYDSEEQLVAVVNPRGERHELTRDPLGRIVEEIDYWGQCRRF---------------- 802 Query: 411 GMDTKTASDYLPQTNWPTTQLPPGYTCAEPYLFPDINKPDGPATAGIDDL 460 + L + + + G A AG +D Sbjct: 803 --HYDASGRLLRSIDPMGRTISFHTDAMGRITHKTWPEISGGAPAGAEDF 850 Score = 52.5 bits (124), Expect = 3e-05, Method: Composition-based stats. Identities = 43/331 (12%), Positives = 83/331 (25%), Gaps = 81/331 (24%) Query: 5 NRIAR-----DAHYLYRYDRHGRLTEKTDLIPE------------GVIRTDDERTHRYHY 47 R+ R A YD RL D D RY Y Sbjct: 703 GRLQRITQHDGAQLTCAYDAEDRLVRYADENGAITELTYSGTGLIARRVQPDGHAVRYDY 762 Query: 48 DSQHRLVHYTRTQYAEPLVE-----------------SRYLYDPLGRRVAKRVWRRERDL 90 DS+ +LV + + R+ YD GR + Sbjct: 763 DSEEQLVAVVNPRGERHELTRDPLGRIVEEIDYWGQCRRFHYDASGRLLRSIDPMGRTIS 822 Query: 91 TGWMSLSR---------------KPQVTWYGWDGDRLTTIQNDRTRIQTIYQ-------- 127 ++ R + Y G RL +N + + + Sbjct: 823 FHTDAMGRITHKTWPEISGGAPAGAEDFRYDAAG-RLVEARNAHSHFKHRFDALGHLVEE 881 Query: 128 ----------PGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQML 177 + + +T+ G + L + + ++ + L Q Sbjct: 882 QQGSFRIERAYDAAGNSVERKTSAGNRVAVRYDLLNRPAEIAINDEPPITIERNALGQAT 941 Query: 178 DRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVS 237 SE + + R+ + + + P++ + D G Sbjct: 942 AEHLSEHV-----VRTLRYNDQGLVAAQAVAKDGAPLFDTR-----FDYDAAGNLTRRTD 991 Query: 238 T-EGATEWCAEYDEWGNLLNEENPHQLQQLI 267 + +G +D G +L+ +P + Sbjct: 992 SQQGNDL--YTHDPMGRILSHVDPMGRVRHY 1020 >UniRef50_C6M9F5 RHS family protein n=2 Tax=Bacteria RepID=C6M9F5_NEISI Length = 448 Score = 183 bits (465), Expect = 9e-45, Method: Composition-based stats. Identities = 62/289 (21%), Positives = 104/289 (35%), Gaps = 19/289 (6%) Query: 55 HYTRTQYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTT 114 + + Y YD LG + + + E + + + + Sbjct: 63 SAVTDNRLKTYNGTTYYYDDLGNLIHRELADGEMQNYFYDLHDQLVKAEIF--------- 113 Query: 115 IQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLV 174 + D T+ Y + I ++ + S L + E+ V+ + Sbjct: 114 -KKDGTKETWSYTYDALGRRI-GKSRLKTSQEVSETSFPHDLSGNDLENQTRFVWDGSHL 171 Query: 175 QMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLA 234 + ++S + Q+++ ++IH +HCD G+P Sbjct: 172 LQEIHPDGRYTYIYADQDSYE-------PLAQVRDWATEDGESRQQIHYFHCDQIGIPRE 224 Query: 235 LVSTEGATEWCAEYDEWGNLLNEEN-PHQLQQLIRLPGQQYDEESGLYYNRHRYYDPLQG 293 + +G W Y WG L E Q RL Q D E+GL+YN RYY+P G Sbjct: 225 MTDKDGNLLWFGNYTGWGRLKEETKVTDSAYQPFRLQNQYADRETGLHYNFFRYYEPDAG 284 Query: 294 RYITQDPIGLKGGWNFYQYPLNPVQYIDSMGLASKYGHLNNGGYGARPN 342 R++ QDPIGL+GG N Y++ N ++D GL S L Sbjct: 285 RFVNQDPIGLEGGENLYKFAPNAQNWVDIFGLWSFGDPLPQWLVDGAAG 333 Score = 98.3 bits (243), Expect = 6e-19, Method: Composition-based stats. Identities = 45/234 (19%), Positives = 67/234 (28%), Gaps = 26/234 (11%) Query: 4 DNRIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAE 63 DNR+ Y YD G L + D Y YD +LV + Sbjct: 67 DNRLKTYNGTTYYYDDLGNLIHRE---------LADGEMQNYFYDLHDQLVKAEIFKKDG 117 Query: 64 PLVESRYLYDPLGRRVAKRVWRRERDLT-----GWMSLSRKPQVTWYGWDGDRLTTIQND 118 Y YD LGRR+ K + ++++ +S + T + WDG L + Sbjct: 118 TKETWSYTYDALGRRIGKSRLKTSQEVSETSFPHDLSGNDLENQTRFVWDGSHLLQEIHP 177 Query: 119 RTRIQTIYQP-GSFTPLIRVE---TATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLV 174 R IY S+ PL +V T GE + D + Sbjct: 178 DGRYTYIYADQDSYEPLAQVRDWATEDGESRQQIHYFHCDQIGIPREMTDKDGNLLWFGN 237 Query: 175 QMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDH 228 E E++ ++ Q Q Y D Sbjct: 238 YTGWGRLKE--------ETKVTDSAYQPFRLQNQYADRETGLHYNFFRYYEPDA 283 >UniRef50_A9GIJ6 Conserved carbohydrate-binding protein, Rhs family n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=A9GIJ6_SORC5 Length = 1429 Score = 183 bits (465), Expect = 9e-45, Method: Composition-based stats. Identities = 81/384 (21%), Positives = 122/384 (31%), Gaps = 36/384 (9%) Query: 11 AHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRY 70 Y G + D R+ +D + +++ T + Sbjct: 833 QSVHYT--PQGDVAAIDDDRSGA---------ERWEHDPRGQVLARTGVHGQG----EHF 877 Query: 71 LYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQN----DRTRIQTIY 126 YD G V + G ++ + Y WDGD + T Y Sbjct: 878 RYDAEGN-VRELGPGAPEREYGRGNVLLRRGPVSYVWDGDGRLIKRRVVMPSGQEATTSY 936 Query: 127 QPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGS----VVFPPVLVQMLDRLES 182 + L V G + A L++ G + + D L Sbjct: 937 EWNGAGLLSAVVRPDGVRIEHVYDPFARRLEKRVVRRGEGGRMDTLSTTRFIWDGDTLVH 996 Query: 183 EILAD-------RVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLAL 235 EI + E + Q + + + + Y D G P L Sbjct: 997 EIKREWGPEGDRVTQERTYCTDEETSAPWAQKDARSGEGDAVSAEWYYYLNDPVGRPERL 1056 Query: 236 VSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEESGLYYNRHRYYDPLQGRY 295 + G + WG E + + +R GQ YD+E+GL YNR+RYYDP GRY Sbjct: 1057 LDAAGNVACELDRTVWGAARPREGA-RTETPLRFLGQYYDDETGLAYNRYRYYDPAVGRY 1115 Query: 296 ITQDPIGLKGGWNFYQYPLN-PVQYIDSMGLASKYGHLNNGGYGARPNKPPTPDPSKLPD 354 I+ DP+GL GG N + Y N P + +D GL G A N P Sbjct: 1116 ISVDPVGLLGGQNGFSYAGNRPTKMVDPTGLMFSTTT---GRKDANGNPLPDIQGKSSTV 1172 Query: 355 IAKQLRLPYPIDQASSAPNVFKTF 378 + P D S++ FK Sbjct: 1173 QSDDDLDPALRDAVSNSREKFKDP 1196 Score = 76.8 bits (187), Expect = 2e-12, Method: Composition-based stats. Identities = 38/229 (16%), Positives = 61/229 (26%), Gaps = 45/229 (19%) Query: 9 RDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHR------------YHYDSQHRLVHY 56 LYRYD HG L E+TD T D R Y +D RL Sbjct: 490 NGGQTLYRYDDHGNLIERTDPTGAVTQYTYDYWGRRQSMLDASGAMVTYAHDDAGRLRSE 549 Query: 57 TRTQYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSR-------KPQVTWYGWD- 108 +RY YDP G + + +R +++ Y ++ Sbjct: 550 RTPDGG----VTRYEYDPSGNCTSIWHPNGHTTTHRYAGYNRIVETREPDGRISKYRYNR 605 Query: 109 --------------------GDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQ 148 RL + + Y+ + +++ E GE Sbjct: 606 EGRLVEVHNSHGEVHRIRLNAARLVSEEITFDGRTLRYRYDAMGRVVQFENGLGEKTGYV 665 Query: 149 RRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSEESRRWL 197 L + + DGG F + + W+ Sbjct: 666 YD-LVGRVVEHQYPDGGVETFEYDELDYIIAAHGPSGDIFFERNLLGWV 713 Score = 68.7 bits (166), Expect = 5e-10, Method: Composition-based stats. Identities = 46/285 (16%), Positives = 76/285 (26%), Gaps = 36/285 (12%) Query: 16 RYDRHGRLTEKTDLIPEGVIRTDDERTHRYHY-DSQHRLVHYTRTQYAEPLVESRYLYDP 74 YD G L TD D R D+ R+ + R DP Sbjct: 394 TYDAWGNLLSFTDATGATTRWERDARGRELRITDALGRVTTFERDADGHIRRAV----DP 449 Query: 75 LG------RRVAKRVWRRERDLTGWMSLSRKPQVTW----------YGWDGDRLTTIQND 118 G R VWR T + R+ T Y +D + D Sbjct: 450 AGGVIETGRLTGGLVWRDAIGATFEVHFDRRGLTTRTVAPNGGQTLYRYDDHGNLIERTD 509 Query: 119 RTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPV------ 172 T T Y + + A+G + L+ DGG + Sbjct: 510 PTGAVTQYTYDYWGRRQSMLDASGAMVTYAHDDAG-RLRSERTPDGGVTRYEYDPSGNCT 568 Query: 173 LVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPA--RKIHLYHCDHRG 230 + + + + ++ + + V ++H + Sbjct: 569 SIWHPNGHTTTHRYAGYNRIVETREPDGRISKYRYNREGRLVEVHNSHGEVHRIRLNAAR 628 Query: 231 LPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQYD 275 L ++ +G T YD G ++ EN + G YD Sbjct: 629 LVSEEITFDGRTL-RYRYDAMGRVVQFENGLGEK-----TGYVYD 667 Score = 62.9 bits (151), Expect = 2e-08, Method: Composition-based stats. Identities = 46/331 (13%), Positives = 82/331 (24%), Gaps = 68/331 (20%) Query: 6 RIARDAHYLYRYDRHGRLTEKTDLIPEGV------------IRTDDERTHRYHYDSQHRL 53 R Y YD G T R D R +Y Y+ + RL Sbjct: 550 RTPDGGVTRYEYDPSGNCTSIWHPNGHTTTHRYAGYNRIVETREPDGRISKYRYNREGRL 609 Query: 54 VHYTRTQYAEP-----------------LVESRYLYDPLGRRVAKRVWRRERDLTGWMSL 96 V + RY YD +GR V E+ + + Sbjct: 610 VEVHNSHGEVHRIRLNAARLVSEEITFDGRTLRYRYDAMGRVVQFENGLGEKTGYVYDLV 669 Query: 97 SR-------KPQVTWYGWDG-DRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQ 148 R V + +D D + I + R + + Sbjct: 670 GRVVEHQYPDGGVETFEYDELDYIIAAHGPSGDIFFERNLLGWVTCERQVSGGETFSVET 729 Query: 149 RRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESE------ILADRVSEESRRWLASCGL 202 + L + + G + + R+ + ++ D + E+ R+L G Sbjct: 730 KHDLMGNVVERKTSRGHHQTWVLDVAGRALRVTLDGDEQLGVVRDALGRETARYLPGGGR 789 Query: 203 -----------TVEQMQNQMDPVYTPARKIHLY-------------HCDHRGLPLALVST 238 + + A + H +G A+ Sbjct: 790 VDVVYDGLDRMVQRTVSRGVAGPVVAAGQPDWIGALPHDLTLRQSVHYTPQGDVAAI-DD 848 Query: 239 EGATEWCAEYDEWGNLLNEENPHQLQQLIRL 269 + + E+D G +L H + R Sbjct: 849 DRSGAERWEHDPRGQVLARTGVHGQGEHFRY 879 Score = 61.7 bits (148), Expect = 6e-08, Method: Composition-based stats. Identities = 39/296 (13%), Positives = 70/296 (23%), Gaps = 49/296 (16%) Query: 8 ARDAHYLYRYDRHGRLTEKTDLIPE-GVIRTDDERTHRYHYDSQ------HRLV------ 54 A A + D GR TD + D + R D RL Sbjct: 407 ATGATTRWERDARGRELRITDALGRVTTFERDADGHIRRAVDPAGGVIETGRLTGGLVWR 466 Query: 55 --------------HYTRTQYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKP 100 T A ++ Y YD G + + Sbjct: 467 DAIGATFEVHFDRRGLTTRTVAPNGGQTLYRYDDHGNLIERTDPTGA------------- 513 Query: 101 QVTWYGWDGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSG 160 VT Y +D D + Y L T G + + + + Sbjct: 514 -VTQYTYDYWGRRQSMLDASGAMVTYAHDDAGRLRSERTPDGGVTRYEYDPSGNCTSIWH 572 Query: 161 -GEDGGSVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPAR 219 + + + R ++ R + E + +++ + Sbjct: 573 PNGHTTTHRYAGYNRIVETREPDGRISKYRYNREGRLVEVHNSHGEVHRIRLNAARLVSE 632 Query: 220 KIHL------YHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRL 269 +I Y D G + + G YD G ++ + P + Sbjct: 633 EITFDGRTLRYRYDAMGRVVQFENGLGEKTG-YVYDLVGRVVEHQYPDGGVETFEY 687 Score = 61.4 bits (147), Expect = 8e-08, Method: Composition-based stats. Identities = 50/328 (15%), Positives = 90/328 (27%), Gaps = 65/328 (19%) Query: 14 LYRYDRHGRLTEKTDLIPEGVIRT-----------DDERTHRYHYDSQHRLVHYTRTQYA 62 YRYD G L D + T + YD + R V Sbjct: 266 RYRYDDAGDLVLAEDAMGAATRYTYTDHLLTCQEHPTGLCFYFVYDGEGRCVETWGAYPG 325 Query: 63 E---------------------PLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLS---- 97 + ++ Y P V G S Sbjct: 326 REDESLAADVPAVLADGITAAKGIFHTKLEYGPH-NYVEAADSISVERFFGNDFGSVDKA 384 Query: 98 -RKPQVTWYGWDGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTL 156 V +D D T T ++ + +R+ A G + +R + + Sbjct: 385 VTAAGVFCRTYDAWGNLLSFTDATGATTRWERDARGRELRITDALGRVTTFERDADGH-I 443 Query: 157 QQSGGEDGGSVVFPPVLVQMLDRLES----EILADRVSEESRRWLASCGLTVEQMQNQMD 212 +++ GG + + ++ R E+ DR +R + G T+ + + + Sbjct: 444 RRAVDPAGGVIETGRLTGGLVWRDAIGATFEVHFDRRGLTTRTVAPNGGQTLYRYDDHGN 503 Query: 213 PVYT--PARKIHLYHCDHRGLPLALVSTEGATEW--------------------CAEYDE 250 + P + Y D+ G +++ GA EYD Sbjct: 504 LIERTDPTGAVTQYTYDYWGRRQSMLDASGAMVTYAHDDAGRLRSERTPDGGVTRYEYDP 563 Query: 251 WGNLLNEENPHQLQQLIRLPGQQYDEES 278 GN + +P+ R G E+ Sbjct: 564 SGNCTSIWHPNGHTTTHRYAGYNRIVET 591 >UniRef50_A6EH31 Rhs family protein n=2 Tax=cellular organisms RepID=A6EH31_9SPHI Length = 1409 Score = 183 bits (463), Expect = 2e-44, Method: Composition-based stats. Identities = 71/371 (19%), Positives = 122/371 (32%), Gaps = 39/371 (10%) Query: 14 LYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAE---------- 63 + YDR+ LT ++ + V+ Y ++ + RL T + + Sbjct: 961 SFDYDRNANLTNQSLITNNRVVH-----NRHYSWEGE-RLKGVTDSSTGDKLFKHDVHGN 1014 Query: 64 ------PLVESRYL-YDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQ 116 + D +G + G + V Y G+ + Sbjct: 1015 LSEVLYGDGTVEFRVPDAVGNLFESLSRKDRSYNRGGRLIESSNAVYKYDQQGN--LIEK 1072 Query: 117 NDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQM 176 R Y L RV E +L L + + ++ + Sbjct: 1073 RSRRGEVWQYYWNEAGMLERVVRPDQEEVIFAYDALGRRLWKRFKKTTTRYLW--DGNKP 1130 Query: 177 LDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALV 236 L + + ++E W+ + G + + D K + D G P+ Sbjct: 1131 LHEWKEFDARESTADEIITWVFNEGNFSPVAKIKGD-------KKYSIIADQLGTPVQGY 1183 Query: 237 STEGATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEESGLYYNRHRYYDPLQGRYI 296 S +G W E D +G + + GQ D E+GL YNR RYY+P +G Y+ Sbjct: 1184 SDDGELIWQRELDSYGRMKMQRGDAGFCN-YLYQGQLMDPETGLAYNRFRYYNPEEGIYV 1242 Query: 297 TQDPIGLKGGWNFYQYPLNPVQYIDSMGLASKYGHLNNGGYGARPNKPPTPDPSKLPDIA 356 +QDPI L GG Y Y + ++D GLA + + G + S + Sbjct: 1243 SQDPIRLLGGSRLYGYVKDTNIWLDPFGLACE----GDSGRHSILKDDKEGGQSHHLNQD 1298 Query: 357 KQLRLPYPIDQ 367 R P ++ Sbjct: 1299 AAFRDVIPRNK 1309 Score = 73.7 bits (179), Expect = 1e-11, Method: Composition-based stats. Identities = 39/280 (13%), Positives = 77/280 (27%), Gaps = 28/280 (10%) Query: 13 YLYRYDRHGRLTEKTDLIP-----------EGVIRTDDERTHRYHYDSQHRLVHYTRTQY 61 Y Y G + + R +D + YD + R Sbjct: 462 VRYTYTAEGNMNGMYNAEGFLNRFAWRERFITARRFNDGTIFTFEYDDKGRCTAALGPDG 521 Query: 62 AEPLVESRYLY-DP---LGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQN 117 L + Y D + D ++ Y +D ++ Sbjct: 522 ---LYSYTFAYIDGLTIATNSLGHSKKYYHADGVVSKIVNSLGGERLYTYDDSNNLIAES 578 Query: 118 DRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQ-- 175 + + T Y+ F LI++ + R + ++ +GG ++ V Sbjct: 579 NEIGVATTYEYDDFGNLIKLHLP-AQGEVVIRYNELHQPVETVLPNGGVWIYEYDEVGKL 637 Query: 176 ------MLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHR 229 + D + E AD + +E + Q ++ V P LY+ D Sbjct: 638 LKRVNPLGDAITYEYNADGLIKEITNVVGQSSFFRYDDQYNLNGVLLPNETQVLYYYDAL 697 Query: 230 GLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRL 269 G + L + +Y+ G + P + Sbjct: 698 GRCIELNDPKKN-THYRKYNLLGKVTEITGPDGGILKLTY 736 Score = 66.8 bits (161), Expect = 2e-09, Method: Composition-based stats. Identities = 37/240 (15%), Positives = 71/240 (29%), Gaps = 44/240 (18%) Query: 4 DNRIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAE 63 R+ ++ +Y+YD+ G L EK +Y+++ L R Sbjct: 1050 GGRLIESSNAVYKYDQQGNLIEKRSRR---------GEVWQYYWNEAGMLERVVRPD--- 1097 Query: 64 PLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLT--------TI 115 E + YD LGRR+ KR + T Y WDG++ Sbjct: 1098 -QEEVIFAYDALGRRLWKRFKKT---------------TTRYLWDGNKPLHEWKEFDARE 1141 Query: 116 QNDRTRIQTIYQPGSFTPLIRVETATGELAKTQ--------RRSLADTLQQSGGEDGGSV 167 I ++ G+F+P+ +++ + + Q + G + Sbjct: 1142 STADEIITWVFNEGNFSPVAKIKGDKKYSIIADQLGTPVQGYSDDGELIWQRELDSYGRM 1201 Query: 168 VFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCD 227 + L L D + + +Q +++ Y D Sbjct: 1202 KMQRGDAGFCNYLYQGQLMDPETGLAYNRFRYYNPEEGIYVSQDPIRLLGGSRLYGYVKD 1261 Score = 64.4 bits (155), Expect = 8e-09, Method: Composition-based stats. Identities = 31/284 (10%), Positives = 63/284 (22%), Gaps = 54/284 (19%) Query: 10 DAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAE------ 63 LY YD L +++ I Y YD L+ E Sbjct: 561 GGERLYTYDDSNNLIAESNEI---------GVATTYEYDDFGNLIKLHLPAQGEVVIRYN 611 Query: 64 -----------PLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRL 112 Y YD +G+ + + ++ Y ++ D L Sbjct: 612 ELHQPVETVLPNGGVWIYEYDEVGKLLKR--------------VNPLGDAITYEYNADGL 657 Query: 113 TTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPV 172 + + ++ L V +L + D Sbjct: 658 IKEITNVVGQSSFFRYDDQYNLNGVLLPNETQVLYYYDALGRCI---ELNDPKKNTHYRK 714 Query: 173 LVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLP 232 + E + + + + + ++ + D Sbjct: 715 YNLLGKVTEITGPDGGILKLTYDSMGNLTSAKDRHHKVEFKHDFFGNVVRRSLGD--NSV 772 Query: 233 LALVSTEGA----TEWCAEYDEW-----GNLLNEENPHQLQQLI 267 + EG E+ + GN++ E L Sbjct: 773 EFVYDKEGQLNGMINEHNEHYVFELDSEGNVIVERGFDGLVFKY 816 Score = 61.4 bits (147), Expect = 7e-08, Method: Composition-based stats. Identities = 37/261 (14%), Positives = 79/261 (30%), Gaps = 37/261 (14%) Query: 7 IARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDD------------ERTHRYHYDSQHRLV 54 + ++Y YD G+L ++ + + + + + ++ + YD Q+ L Sbjct: 621 LPNGGVWIYEYDEVGKLLKRVNPLGDAITYEYNADGLIKEITNVVGQSSFFRYDDQYNLN 680 Query: 55 HYTRTQYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTT 114 + Y YD LGR + ++ + L + ++T G DG L Sbjct: 681 GVLLPN----ETQVLYYYDALGRCIELNDPKKNTHYRKYNLLGKVTEIT--GPDGGILKL 734 Query: 115 IQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLV 174 S L + + + + +++S G++ V+ Sbjct: 735 T------------YDSMGNLTSAKDRH-HKVEFKHDFFGNVVRRSLGDNSVEFVYDKEGQ 781 Query: 175 QML------DRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDH 228 + E+ ++ R + + Q + P +Y D Sbjct: 782 LNGMINEHNEHYVFELDSEGNVIVERGFDGLVFKYLRNPAGQAVQIERPNGHRDIYEYDS 841 Query: 229 RGLPLALVSTEGATEWCAEYD 249 G + L T YD Sbjct: 842 AGQIITLFHQADQTVESYAYD 862 Score = 53.3 bits (126), Expect = 2e-05, Method: Composition-based stats. Identities = 46/307 (14%), Positives = 74/307 (24%), Gaps = 43/307 (14%) Query: 13 YLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLV-----E 67 + Y+ G L D + + D + + Sbjct: 411 IRFTYNEKGHLISIKDSADRMITISS---------DENGLITALSLPNPDFGASGMTFDA 461 Query: 68 SRYLYDPLGRRVAKRVWRRERDLTGWMSLS------RKPQVTWYGWDGDRLTTIQNDRTR 121 RY Y G + W + + +D D+ Sbjct: 462 VRYTYTAEGNMNGMYNAEGFLNRFAWRERFITARRFNDGTIFTFEYD-DKGRCTAALGPD 520 Query: 122 IQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLD--- 178 Y L + G K + + GG ++ L Sbjct: 521 GLYSYTFAYIDGLTIATNSLGHSKKYYHADGV--VSKIVNSLGGERLYTYDDSNNLIAES 578 Query: 179 ---RLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYT--PARKIHLYHCDHRGLPL 233 + + D + L + G V + PV T P + +Y D G L Sbjct: 579 NEIGVATTYEYDDFGNLIKLHLPAQGEVVIRYNELHQPVETVLPNGGVWIYEYDEVGKLL 638 Query: 234 ALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQYD------EESGLYYNRHRY 287 V+ G EY+ G + N R Q E+ + Y Y Sbjct: 639 KRVNPLGDAI-TYEYNADGLIKEITNVVGQSSFFRYDDQYNLNGVLLPNETQVLY----Y 693 Query: 288 YDPLQGR 294 YD GR Sbjct: 694 YD-ALGR 699 Score = 48.7 bits (114), Expect = 4e-04, Method: Composition-based stats. Identities = 45/288 (15%), Positives = 84/288 (29%), Gaps = 52/288 (18%) Query: 15 YRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYLYDP 74 Y YD G++ + D+ Y YD+ R+V L D Sbjct: 837 YEYDSAGQII--------TLFHQADQTVESYAYDNMSRMVAAVNQHAQVVLKR-----DV 883 Query: 75 LGRRVAKRVWRRERDLTGWMSLSRKPQV---------TWYG----------WDGDRLTTI 115 +G RV++ + L ++ +V T Y +G + Sbjct: 884 MG-RVSQEECNGISVNSVHNPLGQRTRVRSSMGADISTTYDEVLFLVEEINANGWQAKMS 942 Query: 116 QNDR---------TRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGS 166 +N ++ + L T R + + G D + Sbjct: 943 RNPTGYLLEKEFVGGVKQSFDYDRNANLTNQSLITNNRVVHNRHYSWEGERLKGVTDSST 1002 Query: 167 VVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTV-----EQMQNQMDPVYTPARKI 221 + + SE+L + E R A L ++ N+ + + + Sbjct: 1003 G--DKLFKHDVHGNLSEVLYGDGTVEFRVPDAVGNLFESLSRKDRSYNRGGRLIESSNAV 1060 Query: 222 HLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRL 269 + Y D +G + S G W ++E G L P Q + + Sbjct: 1061 YKY--DQQGNLIEKRSRRGE-VWQYYWNEAGMLERVVRPDQEEVIFAY 1105 >UniRef50_C7MZM5 Rhs family protein n=1 Tax=Saccharomonospora viridis DSM 43017 RepID=C7MZM5_SACVD Length = 1259 Score = 183 bits (463), Expect = 2e-44, Method: Composition-based stats. Identities = 78/376 (20%), Positives = 120/376 (31%), Gaps = 39/376 (10%) Query: 8 ARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVE 67 R Y Y G LT+ D + + D R+ T T +A Sbjct: 815 QRIQQRSYTYRADGFLTKLDDKLTGP---------RTFELDRIGRITAVTGTGWA----- 860 Query: 68 SRYLYDPLGRRVAKRVWR---------RERDLTGWMSLSRKPQVTWYGWDGDRLTTIQND 118 RY YD G +R+ +G + + G + + Sbjct: 861 ERYAYDAAGNLTHASWPAPPSSDIEELGDREYSGTLIRRAGKVRYEHDAQGRIILRQRKR 920 Query: 119 RTR--IQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSG-GEDGGSVVFPPVLVQ 175 +R Y + LI V T G + + L + + DG V+ Sbjct: 921 LSRKPETWRYFWNADDRLIEVLTPNGARWRYRYDPLGRRVAKQRLTPDGSGVLEQIEFTW 980 Query: 176 MLDRLESEILADRVSEESRR-------WLASCGLTVEQMQNQMDPVYTP-----ARKIHL 223 L + D V+ R W G +Q + + + + Sbjct: 981 DGAVLAEQAHTDGVANGPRLADRRVMVWDYEPGTFRPLVQRERSQLRNAPQQWFDEQFYS 1040 Query: 224 YHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEESGLYYN 283 D G P L++ G W WG ++ +R PGQ D E+G YN Sbjct: 1041 IVTDIVGTPTELINIHGGIAWYHRTTLWGITTDQSRTGAY-TPLRFPGQYADPETGFNYN 1099 Query: 284 RHRYYDPLQGRYITQDPIGLKGGWNFYQYPLNPVQYIDSMGLASKYGHLNNGGYGARPNK 343 R+YDP RY DP+GL GG++ + Y NP +ID +GL A+ N Sbjct: 1100 FQRHYDPASARYAGTDPLGLVGGFDPHSYVWNPYAWIDPLGLKKCDPDRPKHFEKAKENL 1159 Query: 344 PPTPDPSKLPDIAKQL 359 + + A Q Sbjct: 1160 AEFNSIDEAREAAIQY 1175 Score = 76.8 bits (187), Expect = 2e-12, Method: Composition-based stats. Identities = 40/274 (14%), Positives = 71/274 (25%), Gaps = 42/274 (15%) Query: 7 IARDAHYLYRYDRHGRL------------TEKTDLIPEGVIRTDDERTHRYHYDSQHRLV 54 + A + YD G L TE T D R+ YD++ RLV Sbjct: 561 LPDGATERWIYDGEGNLRVHVDALGQETRTEVTHFDLPSEEIRPDGTRLRFDYDTECRLV 620 Query: 55 HYTRTQYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMS-------LSRKPQVTWYGW 107 T Q + RY YD G V + + + + + T + Sbjct: 621 SVTNEQG----LVWRYDYDAAGNLVRETDFNGRVLTYQHDAAGQLIARTNGAGETTHFAR 676 Query: 108 DGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSV 167 D + + + L+ + +R L L ++ + Sbjct: 677 DVFGNVIERRSG-AVTATFTYDPLGRLVEA-MDSDTQVTFRRDPLGRVLAETVNGRTVAS 734 Query: 168 VFPPVLVQMLDRLESEILAD------------RVSEESRRWLASCGLTVEQMQNQMDPVY 215 V+ + ++ R S + R+ Q Q + Sbjct: 735 VYDALGRRIRRRTPSGAETVWEYDANDQPVALHTGGHTLRFDYDRAGREVQRQLGPTAIL 794 Query: 216 TPARKIHLYHCDHRGLPLALVSTEGATEWCAEYD 249 +HR + A+ G Y Sbjct: 795 AQEWD-----TNHRLISQAVTGAAGQRIQQRSYT 823 Score = 74.8 bits (182), Expect = 7e-12, Method: Composition-based stats. Identities = 42/281 (14%), Positives = 76/281 (27%), Gaps = 39/281 (13%) Query: 2 WPDNRIARDAHY-----LYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHY 56 + D R+ + + YD GR+ TD ++R +RY YDSQ R+V Sbjct: 298 YEDRRLTEVINASGLPMRFTYDHAGRIIGWTDR---------NDRWYRYTYDSQGRVVS- 347 Query: 57 TRTQYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRK-------PQVTWYGWDG 109 + + + YD R + R + T WD Sbjct: 348 --GEGSGGFLSGTMEYDTENRITYWTDSQGARTTYHLNEAGQTIREIDPLGNETLSEWDE 405 Query: 110 DRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVF 169 + D T Y+ LI + G A+ + L + + + Sbjct: 406 YDRLLSRTDPLGRTTRYEYDDEGNLIVLTRPDGSQARFEYNELGLPVTIIAPDGTVT--- 462 Query: 170 PPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHR 229 + D + + + + + + V D Sbjct: 463 ----RREYDERGNLTKEIDPLGAVTGYAYDERGHLTSITDALGNVTRVK-------TDAA 511 Query: 230 GLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRLP 270 GLP+ + G D +G + +P Sbjct: 512 GLPIKVTYPMGN-TSRYMRDAFGRVSEAIDPLGGTTRFGWT 551 Score = 74.1 bits (180), Expect = 1e-11, Method: Composition-based stats. Identities = 47/251 (18%), Positives = 74/251 (29%), Gaps = 42/251 (16%) Query: 2 WPDNRIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQY 61 + I R Y +D GR+ + T RY +++ RL+ Sbjct: 892 YSGTLIRRAGKVRYEHDAQGRIILRQRKRLSRKPE-----TWRYFWNADDRLIEVLTPNG 946 Query: 62 AEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTR 121 A RY YDPLGRRVAK+ + + + WDG L + Sbjct: 947 A----RWRYRYDPLGRRVAKQRLTPDGSGVL--------EQIEFTWDGAVLAEQAHTDGV 994 Query: 122 IQ-----------TIYQPGSFTPLIRVETAT---------GELAKTQRRSLADTLQQSGG 161 Y+PG+F PL++ E + E + + T + Sbjct: 995 ANGPRLADRRVMVWDYEPGTFRPLVQRERSQLRNAPQQWFDEQFYSIVTDIVGTPTELIN 1054 Query: 162 EDGGSVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKI 221 GG + + + +S A ++ Q DP Sbjct: 1055 IHGGIAWYHRTTLWGITTDQSRTGAYTPLRFPGQYADPETGFNYNFQRHYDPASA----- 1109 Query: 222 HLYHCDHRGLP 232 D GL Sbjct: 1110 RYAGTDPLGLV 1120 Score = 72.5 bits (176), Expect = 3e-11, Method: Composition-based stats. Identities = 65/419 (15%), Positives = 110/419 (26%), Gaps = 78/419 (18%) Query: 13 YLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYA---------- 62 + Y YD G L +TD + R Y +D+ +L+ T Sbjct: 630 WRYDYDAAGNLVRETD---------FNGRVLTYQHDAAGQLIARTNGAGETTHFARDVFG 680 Query: 63 ------EPLVESRYLYDPLGRRVAKRVWRRERDLTGWM-------SLSRKPQVTWYGWDG 109 V + + YDPLGR V + +++ + + Y G Sbjct: 681 NVIERRSGAVTATFTYDPLGRLVEAMDSDTQVTFRRDPLGRVLAETVNGRTVASVYDALG 740 Query: 110 DRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVF 169 R+ + + + + T G + +Q+ G Sbjct: 741 RRIRRRTPSGAETVW--EYDANDQPVALHT-GGHTLRFDYDRAGREVQRQLGPTAILAQE 797 Query: 170 PPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHR 229 +++ + + R+ + S + A LT + + D Sbjct: 798 WDTNHRLISQAVTGAAGQRIQQRSYTYRADGFLTKLDDKLTGP---------RTFELDRI 848 Query: 230 GLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLI------RLPG---------QQY 274 G A+ T YD GNL + P I G + Sbjct: 849 GRITAVTGTG--WAERYAYDAAGNLTHASWPAPPSSDIEELGDREYSGTLIRRAGKVRYE 906 Query: 275 DEESGLYYNRHR---YYDPLQGR--YITQDPIGLKGGWN----FYQYPLNPVQYIDSMGL 325 + G R R P R + D + N Y+Y D +G Sbjct: 907 HDAQGRIILRQRKRLSRKPETWRYFWNADDRLIEVLTPNGARWRYRY--------DPLGR 958 Query: 326 ASKYGHLNNGGYGARPNKPPTPDPSKLPDIAKQLRLPYPIDQASSAPNVFKTFFRALSP 384 L G G T D + L + A + A V+ P Sbjct: 959 RVAKQRLTPDGSGVLEQIEFTWDGAVLAEQAHTDGVANGPRLADRRVMVWDYEPGTFRP 1017 Score = 72.5 bits (176), Expect = 3e-11, Method: Composition-based stats. Identities = 43/307 (14%), Positives = 78/307 (25%), Gaps = 44/307 (14%) Query: 15 YRYDRHGRLTEKTDLIPEGVIRTDD------------ERTHRYHYDSQHRLVHYTRTQYA 62 Y YD G LT TD + D T RY D+ R+ Sbjct: 485 YAYDERGHLTSITDALGNVTRVKTDAAGLPIKVTYPMGNTSRYMRDAFGRVSEAIDPLGG 544 Query: 63 EP-----------------LVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQ---- 101 R++YD G + T + Sbjct: 545 TTRFGWTVDGKPAWRTLPDGATERWIYDGEGNLRVHVDALGQETRTEVTHFDLPSEEIRP 604 Query: 102 ---VTWYGWDGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQ 158 + +D + + + Y + L+R G + Q + + + Sbjct: 605 DGTRLRFDYDTECRLVSVTNEQGLVWRYDYDAAGNLVRETDFNGRVLTYQHDAAGQLIAR 664 Query: 159 SGGEDGGSV----VFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPV 214 + G + VF V+ + + + D + + +T + Sbjct: 665 TNGAGETTHFARDVFGNVIERRSGAVTATFTYDPLGRLVEAMDSDTQVTFRRDPLGRVLA 724 Query: 215 YTPARKIHLYHCDHRG-LPLALVSTEGATEWCAEYDEWGNLLN-EENPHQLQQLIRLPGQ 272 T + D G + T W EYD + H L+ G+ Sbjct: 725 ETVNGRTVASVYDALGRRIRRRTPSGAETVW--EYDANDQPVALHTGGHTLRFDYDRAGR 782 Query: 273 QYDEESG 279 + + G Sbjct: 783 EVQRQLG 789 Score = 70.6 bits (171), Expect = 1e-10, Method: Composition-based stats. Identities = 67/469 (14%), Positives = 126/469 (26%), Gaps = 82/469 (17%) Query: 8 ARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTH-----------------RYHYDSQ 50 + YD G E + + RY Y Sbjct: 242 RNGNRIDFEYDAAGTPVEVRHSGGYRIRVESEGGLVTALYLREADNGSDVLLMRYGY-ED 300 Query: 51 HRLVHYTRTQYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGD 110 RL + R+ YD GR + GW + + Y G Sbjct: 301 RRLTEVI----NASGLPMRFTYDHAGRII------------GWTDRNDRWYRYTYDSQG- 343 Query: 111 RLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFP 170 R+ + + + + + + + G T+++ ++ Sbjct: 344 RVVSGEGSGGFLSGTMEYDTENRITYWTDSQGARTTYHLNEAGQTIREIDPLGNETLSEW 403 Query: 171 PVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRG 230 ++L R + + R+ + + + + G Sbjct: 404 DEYDRLLSRTD-------PLGRTTRYEYDDEGNLIVLTRPDGSQAR-------FEYNELG 449 Query: 231 LPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEE------SGLYYNR 284 LP+ +++ +G EYDE GNL E +P G YDE + N Sbjct: 450 LPVTIIAPDGTVT-RREYDERGNLTKEIDPLGAV-----TGYAYDERGHLTSITDALGNV 503 Query: 285 HRYYDPLQGRYITQDPIGLK-----GGWNFYQYPLNPVQYI----DSMGLASKYGHLNNG 335 R + D GL N +Y + + D +G +++G +G Sbjct: 504 TR---------VKTDAAGLPIKVTYPMGNTSRYMRDAFGRVSEAIDPLGGTTRFGWTVDG 554 Query: 336 GYGARPNKPPTPDPSKLPDIAKQLRLPYPIDQASSAPNV--FKTFFRALSPYDYTLYCRK 393 R P + D LR+ + V F + P L Sbjct: 555 KPAWRT-LPDGATERWIYDGEGNLRVHVDALGQETRTEVTHFDLPSEEIRPDGTRLRFDY 613 Query: 394 WVKPNLTCTPQDDSQYPGMDTKTASDYLPQTNWPTTQLPPGYTCAEPYL 442 + L + D A + + +T++ L + A + Sbjct: 614 DTECRLVSVTNEQGLVWRYDYDAAGNLVRETDFNGRVLTYQHDAAGQLI 662 Score = 63.7 bits (153), Expect = 1e-08, Method: Composition-based stats. Identities = 47/290 (16%), Positives = 84/290 (28%), Gaps = 50/290 (17%) Query: 12 HYLYRYDRHGRLTEKTDLIPEGVIRTD----------DERTHRYHYDSQHRLVHYTRTQY 61 + YD GRL E D + R D + RT YD+ R + Sbjct: 691 TATFTYDPLGRLVEAMDSDTQVTFRRDPLGRVLAETVNGRTVASVYDALGRRIRRRTPSG 750 Query: 62 A----------------EPLVESRYLYDPLGRRVAKR------------VWRRERDLTGW 93 A R+ YD GR V ++ R Sbjct: 751 AETVWEYDANDQPVALHTGGHTLRFDYDRAGREVQRQLGPTAILAQEWDTNHRLISQAVT 810 Query: 94 MSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLA 153 + ++ Q Y + D T +D+ ++ + V T TG + + Sbjct: 811 GAAGQRIQQRSYTYRADGFLTKLDDKLTGPRTFELDRIGRITAV-TGTGWAERYAYDAAG 869 Query: 154 DTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDP 213 + S S + ++ DR S L R + A + + Q + Sbjct: 870 NLTHASWPAPPSS-----DIEELGDREYSGTLIRRAGKVRYEHDAQGRIILRQRKR---- 920 Query: 214 VYTPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQL 263 + + Y + + +++ GA W YD G + ++ Sbjct: 921 -LSRKPETWRYFWNADDRLIEVLTPNGA-RWRYRYDPLGRRVAKQRLTPD 968 >UniRef50_Q3K7R3 Putative insecticidal toxin n=1 Tax=Pseudomonas fluorescens Pf0-1 RepID=Q3K7R3_PSEPF Length = 928 Score = 182 bits (462), Expect = 2e-44, Method: Composition-based stats. Identities = 63/350 (18%), Positives = 102/350 (29%), Gaps = 40/350 (11%) Query: 11 AHYLYRYDRHGRLTEKTDLIPEGVIRTDDER--THRYHYDSQHRLVHYTRTQYAEP---- 64 + Y YDR G T D + + +D+ ++L+ T A P Sbjct: 277 QDFGYGYDRVGNTTRIVDHTYTPTYFRNQRVDGQRTFDHDTTYQLIRATGYSDAPPRDNP 336 Query: 65 ------------LVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQV---------- 102 Y YD R T M + Sbjct: 337 GRPQPTDPRDRRNYVETYEYDEGKNLTLLTHVRDGSAHTFEMCIDPGSNRGVRWKPGDPA 396 Query: 103 ----TWYGWDGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQ 158 + G++L + + + L VE A+G + + Sbjct: 397 PDFRALFDRAGNQLALQRGQPMQWNSR---NQLESLTLVEHASGPPDRELYQYSQGARVY 453 Query: 159 SGGEDGGSVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPA 218 E V V + LE + G P A Sbjct: 454 KRLETHTRKVSHVEQVHYVGNLEIRSKSSGEELHRITVATGVGEVTCLHWVAGKPPGIDA 513 Query: 219 RKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLN---EENPHQLQQLIRLPGQQYD 275 ++ DH G + + Y +G ++ + IR G++ Sbjct: 514 DQMRYSLTDHLGSSVTELDQNARLISQEGYFAFGATAWMVADKLVEADYKFIRYSGKEM- 572 Query: 276 EESGLYYNRHRYYDPLQGRYITQDPIGLKGGWNFYQYPLN-PVQYIDSMG 324 E SGLY+ RYY P GR+++ DP G + G N Y + N P++Y+D G Sbjct: 573 ERSGLYHYGVRYYAPWLGRWVSTDPTGDEDGPNRYAFVGNSPLRYVDPAG 622 Score = 41.3 bits (95), Expect = 0.073, Method: Composition-based stats. Identities = 23/157 (14%), Positives = 45/157 (28%), Gaps = 15/157 (9%) Query: 16 RYDRHGRLTEKTDLIPEGVIRTDDERTHRYHY-DSQHRLV-HYTRTQYAEPLVESRYLYD 73 Y+ G++TE+ R ++ T+R+ Y D+ RL+ Y + + + + Y YD Sbjct: 234 DYNAAGQITEQ---------RLGNDVTNRWCYRDTDGRLLRQYAQKASGQAIQDFGYGYD 284 Query: 74 PLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQPGSFTP 133 +G R + D + PG Sbjct: 285 RVGNTTRIVDHTYTPTYFRN---QRVDGQRTFDHDTTYQLIRATGYSDAPPRDNPG-RPQ 340 Query: 134 LIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFP 170 + + + + DG + F Sbjct: 341 PTDPRDRRNYVETYEYDEGKNLTLLTHVRDGSAHTFE 377 >UniRef50_A3DF74 YD repeat protein n=17 Tax=Clostridium thermocellum RepID=A3DF74_CLOTH Length = 1959 Score = 182 bits (462), Expect = 2e-44, Method: Composition-based stats. Identities = 66/370 (17%), Positives = 125/370 (33%), Gaps = 45/370 (12%) Query: 15 YRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYLYDP 74 Y YD +G + + ++ R Y YDS +RL + + ++ ++ YD Sbjct: 1383 YFYDTNG----------SQIKKEENGRVTLYGYDSVNRLEKVSYPEG----IDEKFAYDN 1428 Query: 75 LGRRVAKRVWRRERDL-----TGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQPG 129 G R+A+ + + + VT Y +D + + ++ ++ Sbjct: 1429 AGNRIAREFGKLLENYKYDKSNRLIQKVSNGIVTDYEYDAGGNLVKEIEGESVR-RFEYD 1487 Query: 130 SFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRV 189 F L++V G + + +Q + +F + + Sbjct: 1488 DFKRLVKVINPDGTYMENIYDAEGMRVQTVENGEYRRFIFDGN--------------NAI 1533 Query: 190 SEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWCAEYD 249 +E W +++ + Y + G L + G +YD Sbjct: 1534 AEVGEDWSLKGRNVRGHALLELEDE---NNNTYHYLHNAHGDVANLADSSGKIVNTYDYD 1590 Query: 250 EWGNLLNEENPHQLQQLIRLPGQQYDEESGLYYNRHRYYDPLQGRYITQDP----IGLKG 305 +GN L + R G+QYD+ +G YY R R+Y P GR+ +D Sbjct: 1591 AFGNTL--SVKETIHNRFRYAGEQYDDFTGQYYLRARFYSPSLGRFTQEDTWRGFTYNPA 1648 Query: 306 GWNFYQYP-LNPVQYIDSMGLASKYGHLNNGGYGARPNKPPTPDPSKLPDIAKQLRLPYP 364 N Y Y NPV ++D G K+ G + N+ +++ D+ Sbjct: 1649 SLNLYTYVENNPVMFVDPTGHWPKFIDNALDWVGNKVNEAADWVGNRVNDVV-DWAGDRI 1707 Query: 365 IDQASSAPNV 374 D + N Sbjct: 1708 NDARNFITNT 1717 Score = 74.8 bits (182), Expect = 6e-12, Method: Composition-based stats. Identities = 44/276 (15%), Positives = 72/276 (26%), Gaps = 30/276 (10%) Query: 17 YDRHGRLTEKTDLIPEGVIRTDDERT-HRYHYDSQHRLVHYTRTQY-AEPLVESRYLYDP 74 Y+ G + +K D D++R Y YD RL + T + A+ +V +Y Y+ Sbjct: 1072 YNTAGEIIKKIDARGYLAAANDNDRYGVEYGYDPGGRLRYITTPEAKAKGIVSQQYNYNS 1131 Query: 75 LGRRVAKRVWRRERDLTGWMSLS-------RKPQVTWYGWDGDRLTTIQNDRTRIQTIYQ 127 LG + + V Y +D T D T Y Sbjct: 1132 LGYITEIIDGKGNKTEYTLDLWGKIREVHEATGSVFRYEYDYAGNLTAVIDGNGNVTRYN 1191 Query: 128 PGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVV-------------FPPVLV 174 S L + G + + S E + + Sbjct: 1192 YNSLNILSEIIDPLGGRISYKYDRQGRMVWTSDREGRVTHYRYNFDDKLVSIWSENGIFE 1251 Query: 175 QMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLA 234 + L+ + A + + +++ V D G Sbjct: 1252 KYEYNLDGSLAASISDRTIHSYTYTPSGRLKKKNTNGVTVLDCE-------YDKSGRVTK 1304 Query: 235 LVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRLP 270 L G T YD G L N N + Sbjct: 1305 LTDVSGKTI-EYTYDILGRLTNVINEGRKTAQYEYN 1339 Score = 70.2 bits (170), Expect = 2e-10, Method: Composition-based stats. Identities = 75/507 (14%), Positives = 136/507 (26%), Gaps = 97/507 (19%) Query: 13 YLYRYDRHGRLTEKTDLIPEGV----------------IRTDDERTHRYHYDSQHRLVHY 56 Y+YD++GR+ E +D I V I + + R+ Y S RL Sbjct: 834 ISYKYDKNGRIIEVSDSIGSCVQYEYDCLGKKTLEKKKINDNTYKITRFEYSSAGRLKKV 893 Query: 57 ---------TRTQYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQV----- 102 + E+ + YD G A R + + +R+ V Sbjct: 894 IEEYDGKDLAGEEKGTVKAETLFEYDRNGNITAVISPEGYRKRFIYDAANRRIGVEEYLP 953 Query: 103 ---------------------TWYGWDGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETAT 141 T Y +D Q + IR++ A Sbjct: 954 PEGVKISGNAVNALLKTIVRKTLYSYDKAGNLVQQRLPNGRTVETEYDEMNRRIRIKDAE 1013 Query: 142 GELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEIL--ADRVSEESRRWLAS 199 G + + + + ++ E+ + + +L + R + + Sbjct: 1014 GNITRLFYDASGNLIKYVEPENYDPKIDDGPGTSYFYDSMNRLLQVTNAAGIVVERNIYN 1073 Query: 200 CGLTVEQMQNQMDPVYTPARKIHL---YHCDHRGLPLALVSTE----GATEWCAEYDEWG 252 + + + + Y D G + + E G Y+ G Sbjct: 1074 TAGEIIKKIDARGYLAAANDNDRYGVEYGYDPGGRLRYITTPEAKAKGIVSQQYNYNSLG 1133 Query: 253 NLLNEENPHQLQQLIRLP--GQ--QYDEESGLYYNRHRY-YDPLQGRYITQDPIGLKGGW 307 + + + L G+ + E +G RY YD G I G Sbjct: 1134 YITEIIDGKGNKTEYTLDLWGKIREVHEATGSV---FRYEYD-YAGNLTAV--IDGNGNV 1187 Query: 308 NFYQYPLNPVQ----YIDSMGLASKYGHLNNGGYGARPNKPPTPDP----------SKLP 353 Y Y N + ID +G Y + G ++ S Sbjct: 1188 TRYNY--NSLNILSEIIDPLGGRISYKYDRQGRMVWTSDREGRVTHYRYNFDDKLVSIWS 1245 Query: 354 DIAKQLRLPYPIDQASSAPNVFKTFFRALSPYDYTLYCRKWVKPNLTCTPQDDSQYPGMD 413 + + Y +D + +A +T + Y YT R K N D +Y Sbjct: 1246 ENGIFEKYEYNLDGSLAASISDRT----IHSYTYTPSGR-LKKKNTNGVTVLDCEY---- 1296 Query: 414 TKTASDYLPQTNWPTTQLPPGYTCAEP 440 + T+ + Y Sbjct: 1297 -DKSGRVTKLTDVSGKTIEYTYDILGR 1322 Score = 67.5 bits (163), Expect = 9e-10, Method: Composition-based stats. Identities = 55/476 (11%), Positives = 99/476 (20%), Gaps = 115/476 (24%) Query: 12 HYLYRYDRHGRLTEKTDLIPEGVIRTDD-------------------------------- 39 YRYD+ G LT +DL + + Sbjct: 247 GTTYRYDKSGNLTSISDLNGNAISIKYNGQGMISSVISPGGKFLDFSYEDLKLRKITDHT 306 Query: 40 ERTHRYHYDSQHRLVHYTRTQYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRK 99 R Y YD L+ +Y YD G + Sbjct: 307 GREIIYSYDKSGNLIQVKYPDGG----IIKYGYDNKGMI--SITDQNGNTYVQNTYDEAG 360 Query: 100 PQVTWYGWDGDRLTTIQNDR----------TRIQTIYQPGSFTPLIRVETATGELAKTQR 149 V +G+ L + I IY+ L + G Sbjct: 361 RVVKQLDHEGNELVIEYCPGECKNIFKWQKSGITRIYKYNEEKLLTEIIYDDGTKEVYTY 420 Query: 150 RSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQN 209 + + ++ + E + R+ N Sbjct: 421 DEDKNRNSITDRNGRTRRFKYDERGNLIAEIMPE-----PFNYTVRYSYDGN-------N 468 Query: 210 QMDPVYTPARKIHLYHCDHRGLP---LALVSTEGATEWCAEYDEWGNLLNEENPHQLQQL 266 + + TPA + + D +G + +++ +E YDE+G +L + Sbjct: 469 RRTKISTPAGGLARFEYDEKGNLLKRIVKINSNTNSETVYTYDEFGRVLTITDAENNTTS 528 Query: 267 IRLPGQQYDEESGLYYNRHRYYDPLQGRYITQDPIGLKGGWNFYQYPLNPVQYIDSMGLA 326 D++ P ID G Sbjct: 529 FEYN----DDDI-----------------------------------NKPSAIIDPEGNR 549 Query: 327 SKYGHLNNGGYGARPNKPPTPDPSKLPDIAKQLRLPYPIDQASSAPNVFKTFFRALSPYD 386 Y G A T + ++ + ++P Sbjct: 550 FTYDFDAIGRVVAITTGYGTVKIEYNERDKITGLIDAENNKIRIKYDAVGNMVEVIAPEQ 609 Query: 387 YTLYCRKWVKPNLTCTPQDDSQYPGMDTKTASDYLPQTNWPTTQLPPGYTCAEPYL 442 Y D +Q + Q + Y + Sbjct: 610 Y-------------AQKGDKAQSYTFAYDAMDRMIKQIDPLGNVFMVKYDEHGNKI 652 Score = 66.0 bits (159), Expect = 3e-09, Method: Composition-based stats. Identities = 38/302 (12%), Positives = 75/302 (24%), Gaps = 52/302 (17%) Query: 14 LYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVES----- 68 + YD G L ++ I + Y YD R++ T + E Sbjct: 482 RFEYDEKGNLLKRIVKINS-----NTNSETVYTYDEFGRVLTITDAENNTTSFEYNDDDI 536 Query: 69 --------------RYLYDPLGRRVA--------KRVWRRERDLTGWMSLSRKPQVTWYG 106 Y +D +GR VA K + +TG + Y Sbjct: 537 NKPSAIIDPEGNRFTYDFDAIGRVVAITTGYGTVKIEYNERDKITGLIDAENNKIRIKYD 596 Query: 107 WDGDRL------TTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSG 160 G+ + Q + + +I+ G + + + +++ Sbjct: 597 AVGNMVEVIAPEQYAQKGDKAQSYTFAYDAMDRMIKQIDPLGNVFMVKYDEHGNKIKEVN 656 Query: 161 GEDGGSVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGL-----TVEQMQNQMDPVY 215 + + + + S+ + T+ + Sbjct: 657 PNYYNEEEDDGIGMVYKYDSSHRQINTIFPDGSKSRIKYDPQGNIIKTILPGDYNEETDD 716 Query: 216 TPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQYD 275 P + D ++ G YDE G ++ E D Sbjct: 717 GPGMQFTYDEMDRL---DKIIDPNGNVIAKYLYDEDGRVIKE------INAKGYSSADND 767 Query: 276 EE 277 EE Sbjct: 768 EE 769 Score = 65.6 bits (158), Expect = 4e-09, Method: Composition-based stats. Identities = 33/252 (13%), Positives = 66/252 (26%), Gaps = 40/252 (15%) Query: 7 IARDAHYLY---RYDRHGRLTEKTDLIPEGVI-------------RTDDERTHRYHYDSQ 50 I Y YD GR+ ++ D ++ T Y Y+ + Sbjct: 343 ITDQNGNTYVQNTYDEAGRVVKQLDHEGNELVIEYCPGECKNIFKWQKSGITRIYKYNEE 402 Query: 51 HRLVHYTRTQYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGD 110 L + Y YD R + + + + Y G+ Sbjct: 403 KLLTEIIYDDG----TKEVYTYDEDKNRNSIT------------DRNGRTRRFKYDERGN 446 Query: 111 RLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFP 170 + I + Y ++ T G LA+ + + L++ + + Sbjct: 447 LIAEIMPEPFNYTVRYSYDGNNRRTKISTPAGGLARFEYDEKGNLLKRIVKINSNT---N 503 Query: 171 PVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRG 230 V D + + + + N+ + P Y D G Sbjct: 504 SETVYTYDEFGRVLTITDAENNTTSFEYNDDDI-----NKPSAIIDPEGNRFTYDFDAIG 558 Query: 231 LPLALVSTEGAT 242 +A+ + G Sbjct: 559 RVVAITTGYGTV 570 Score = 64.1 bits (154), Expect = 1e-08, Method: Composition-based stats. Identities = 47/284 (16%), Positives = 81/284 (28%), Gaps = 45/284 (15%) Query: 3 PDNRIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVH------- 55 DN R Y+Y+ G L EK + + T YD RLV Sbjct: 764 ADNDEERWGTL-YKYNLAGWLVEKRTPLESINGQIFYNVTEN-VYDRNGRLVQQKISPEY 821 Query: 56 YTRTQYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKP-----------QVTW 104 T+T Y + Y YD GR + + L +K ++T Sbjct: 822 VTKTGYPKTWNIISYKYDKNGRIIEVSDSIGSCVQYEYDCLGKKTLEKKKINDNTYKITR 881 Query: 105 Y-------------GWDGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRS 151 + +DG L + + +T+++ + V + G + + Sbjct: 882 FEYSSAGRLKKVIEEYDGKDLAGEEKGTVKAETLFEYDRNGNITAVISPEGYRKRFIYDA 941 Query: 152 LADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQM 211 + G PP V++ + +L V + + + L +++ N Sbjct: 942 ANRRI-------GVEEYLPPEGVKISGNAVNALLKTIVRKTLYSYDKAGNLVQQRLPNGR 994 Query: 212 DPVYTPARKIHLY-HCDHRGLPLALV-STEGATEWCAE---YDE 250 D G L G E YD Sbjct: 995 TVETEYDEMNRRIRIKDAEGNITRLFYDASGNLIKYVEPENYDP 1038 Score = 63.7 bits (153), Expect = 1e-08, Method: Composition-based stats. Identities = 55/376 (14%), Positives = 99/376 (26%), Gaps = 73/376 (19%) Query: 12 HYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYL 71 Y YD + R T+ + R+ YD + L+ + E+ Y Sbjct: 459 TVRYSYDGNNRRTKISTPAGGLA---------RFEYDEKGNLLKRIVKINSNTNSETVYT 509 Query: 72 YDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQPGSF 131 YD GR LT + Y Sbjct: 510 YDEFGR---------------------------------VLTITDAENNTTSFEYNDDDI 536 Query: 132 TPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSE 191 + G ++ + + G + + +R + L D + Sbjct: 537 NKPSAIIDPEGNRFTYDFDAIGRVVAITTGYGTVKIEYN-------ERDKITGLIDAENN 589 Query: 192 ESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEW 251 + R + G VE + + + + + D + + G +YDE Sbjct: 590 KIRIKYDAVGNMVEVIAPEQYAQKGDKAQSYTFAYDAMDRMIKQIDPLGNVF-MVKYDEH 648 Query: 252 GNLLNEENPHQLQQLIRLPGQQYDEESGLYYNRHRYYDPLQGRYITQDPIGLKGGWNFYQ 311 GN + E NP+ ++ D+ G+ Y YD R I I G + + Sbjct: 649 GNKIKEVNPN-------YYNEEEDDGIGMVYK----YDSSH-RQINT--IFPDGSKSRIK 694 Query: 312 YPLNPVQYIDSMGLASKYGHLNNGGYGARPNKPPTPDPSKLPDIAKQLRLPYPIDQASSA 371 Y D G L + P D ++ P A Sbjct: 695 Y--------DPQG-NIIKTILPGDYNEETDDGPGMQFTYDEMDRLDKIIDPNGNVIAKYL 745 Query: 372 PNVFKTFFRALSPYDY 387 + + ++ Y Sbjct: 746 YDEDGRVIKEINAKGY 761 Score = 56.7 bits (135), Expect = 2e-06, Method: Composition-based stats. Identities = 43/261 (16%), Positives = 75/261 (28%), Gaps = 38/261 (14%) Query: 10 DAHYLYRYDRHGRLTEKTDLIPEG--------------------VIRTDDERTHRYHYDS 49 Y + YD R+ ++ D + DD Y YDS Sbjct: 617 AQSYTFAYDAMDRMIKQIDPLGNVFMVKYDEHGNKIKEVNPNYYNEEEDDGIGMVYKYDS 676 Query: 50 QHRLVHYTRTQYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDG 109 HR ++ ++ R YDP G + K + + + + +D Sbjct: 677 SHRQINTIFPDGSKS----RIKYDPQGNII-KTILPGDYNEETDDGPGM-----QFTYDE 726 Query: 110 -DRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVV 168 DRL I + + Y +I+ A G + TL + Sbjct: 727 MDRLDKIIDPNGNVIAKYLYDEDGRVIKEINAKGYSSADNDEERWGTLYKYNLAG----- 781 Query: 169 FPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDH 228 + L+ + +I + V+E + Y I Y D Sbjct: 782 WLVEKRTPLESINGQIFYN-VTENVYDRNGRLVQQKISPEYVTKTGYPKTWNIISYKYDK 840 Query: 229 RGLPLALVSTEGATEWCAEYD 249 G + + + G+ EYD Sbjct: 841 NGRIIEVSDSIGSCV-QYEYD 860 Score = 53.3 bits (126), Expect = 2e-05, Method: Composition-based stats. Identities = 28/197 (14%), Positives = 56/197 (28%), Gaps = 19/197 (9%) Query: 10 DAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESR 69 Y+YDR GR+ +D + R Y Y+ +LV + + Sbjct: 1206 GGRISYKYDRQGRMVWTSDR---------EGRVTHYRYNFDDKLVSIWSENG----IFEK 1252 Query: 70 YLYDPLGRRVA----KRVWRRERDLTGWMSLSRKPQVTWYG--WDGDRLTTIQNDRTRIQ 123 Y Y+ G A + + +G + VT +D T D + Sbjct: 1253 YEYNLDGSLAASISDRTIHSYTYTPSGRLKKKNTNGVTVLDCEYDKSGRVTKLTDVSGKT 1312 Query: 124 TIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESE 183 Y L V + A+ + + G + + +++ L + Sbjct: 1313 IEYTYDILGRLTNVINEGRKTAQYEYNPDNTISRILYGSGVFAKYDYDMDKKIIGILNVD 1372 Query: 184 ILADRVSEESRRWLASC 200 + + + Sbjct: 1373 PFGRELFNGKYFYDTNG 1389 >UniRef50_C2HXF5 Rhs family protein n=1 Tax=Vibrio cholerae bv. albensis VL426 RepID=C2HXF5_VIBCH Length = 967 Score = 182 bits (462), Expect = 2e-44, Method: Composition-based stats. Identities = 66/363 (18%), Positives = 114/363 (31%), Gaps = 43/363 (11%) Query: 13 YLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYT---------RTQYAE 63 YRYD H + + D T ++ YD+Q R++ + Sbjct: 419 IEYRYDNHNNVISRYDEQL--------GITDKWVYDAQDRVISNQIFLSKPAQHGENNPD 470 Query: 64 PLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQ----VTWYGWDGDRLTTIQNDR 119 Y YD LG K + Q Y G+ L + Sbjct: 471 LSGPFNYQYDQLGNLKFKTNIGGYEYGSQQAGPHAVTQANGLSYQYDQAGNMLRAYAANN 530 Query: 120 TRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDR 179 + + + +F ++ G+ + + + + + + F ++++R Sbjct: 531 SMNERELEWSTFNKPTKITR-NGKSVQFFYDANHERYLKKSSDGIETFYFGKTYERVINR 589 Query: 180 LESEILADRVSEESRRWLASCGLTVEQ-MQNQMDPVYTPARKIHLYHCDHRGLPLALVST 238 EI E ++++ + G + +Q Q ++I H D + Sbjct: 590 KTGEI-------EHKQFVYADGKLIALNIQTQDAQNKLKDKQIRYLHYDALNSIDMITDG 642 Query: 239 EGATEWCAEYDEWGNLLN----EENPHQLQQ----LIRLPGQQYDEESGLYYNRHRYYDP 290 G YD WG E ++ Q G + E GL + R YD Sbjct: 643 YGLVVERRSYDTWGKQRKVAWRETGSLEVVQEALTNRGFTGHEEITEVGLVHMNGRVYDQ 702 Query: 291 LQGRYITQDPIGLKG----GWNFYQYP-LNPVQYIDSMGLASKYGHLNNGGYGARPNKPP 345 GR+I+ DPI +N Y Y NP++YID G S G + P Sbjct: 703 ELGRFISPDPIVQAPFSTVSFNRYAYVWNNPLKYIDPTGFWSVEETDLISGETTTVDFPD 762 Query: 346 TPD 348 Sbjct: 763 DVG 765 >UniRef50_C8W2A7 YD repeat protein n=3 Tax=Desulfotomaculum acetoxidans DSM 771 RepID=C8W2A7_DESAS Length = 1732 Score = 182 bits (462), Expect = 2e-44, Method: Composition-based stats. Identities = 67/329 (20%), Positives = 108/329 (32%), Gaps = 41/329 (12%) Query: 13 YLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYLY 72 Y Y Y +G ++ + + YD+ RL ++ T V+ Y+Y Sbjct: 1314 YDYSYYNNGNISSISSWAGID----------NFVYDANGRLTSWSFTPQNGSPVQESYIY 1363 Query: 73 DPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQPGSFT 132 D G + K + ++ S + +D + T Y + + Sbjct: 1364 DAAGNMLRKGSRDFSYNNANQITNSG------FTYDNNGNMTSDG-----TFNYTYDTES 1412 Query: 133 PLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSEE 192 L +V+ + D L+ S G D Sbjct: 1413 QLTQVKRVSDNSLVATYNYRHDGLRTSKTVYSGQTSQTTYFNW-----------DAFGRL 1461 Query: 193 SRRWLASCGLTVEQMQNQMDPV-YTPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEW 251 R ++ ++ NQ V + + H + RG L + +G YD W Sbjct: 1462 VRESDSAGNVSFYNYDNQGKLVCFRKNNYTYEVHLNLRGDVYLLTNIDGGFYAKYNYDPW 1521 Query: 252 GNLLNEENPHQLQQLIRLPGQQYDEESGLYYNRHRYYDPLQGRYITQDPIGL-----KGG 306 GN ++ + R G YDEE+GLYY + RYY P GR++T+D I Sbjct: 1522 GNQISYSG--WISAPFRYAGYYYDEETGLYYLKSRYYSPALGRFLTKDSIKYIKYKNPQT 1579 Query: 307 WNFYQYPL-NPVQYIDSMGLASKYGHLNN 334 N Y Y NPV +D G Sbjct: 1580 LNLYSYAGSNPVNNVDPTGEIPVRATWKA 1608 Score = 65.6 bits (158), Expect = 4e-09, Method: Composition-based stats. Identities = 43/349 (12%), Positives = 72/349 (20%), Gaps = 80/349 (22%) Query: 5 NRIARD-----AHYLYRYDRHGRLTEKTDLIPE--------------------------- 32 NR+ R H Y YD LT D Sbjct: 1077 NRLVRVTDPMSGHAYYEYDPVSNLTATRDPKSSSSTDSTYRTLFAHNNINQLNTLADPLL 1136 Query: 33 -------------GVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYLYDPLGRRV 79 + + Y YDS +RL + + Y YD + Sbjct: 1137 RNISNTYDRSSNLTRVSLPNGLQINYTYDSANRLTS----KILDNGKHYNYSYDGANNLI 1192 Query: 80 AKRVWRRERDLTGWMSLSRKPQVT-------WYGWD-GDRLTTIQNDRTRI-QTIYQPGS 130 + + L + R T Y WD + L + Y GS Sbjct: 1193 SVTDQDNKSCLWDYDGAGRVKYSTDSFGYRLDYTWDKSNNLVKESYPPSTYACISYIYGS 1252 Query: 131 FTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVS 190 L++V + + + +G + + + Sbjct: 1253 DNRLLQVNGIGDS--FNYYYDESGRVFKIIYGNGLYSLKNIIYYPNGWCKNIQNCLRGGE 1310 Query: 191 EESRRWLASCGLTVEQMQNQMDPV----YTPARKIHLYHCDHRGLPLA---LVSTEGATE 243 + + + + R G P+ + G Sbjct: 1311 RYVYDYSYYNNGNISSISSWAGIDNFVYDANGRLTSWSFTPQNGSPVQESYIYDAAGNML 1370 Query: 244 WCAEYD-EW---------GNLLNEENPHQLQQLIRLPGQQYDEESGLYY 282 D + G + YD ES L Sbjct: 1371 RKGSRDFSYNNANQITNSGFTYDNNGNMTSDGTFNYT---YDTESQLTQ 1416 Score = 61.0 bits (146), Expect = 1e-07, Method: Composition-based stats. Identities = 26/159 (16%), Positives = 38/159 (23%), Gaps = 15/159 (9%) Query: 18 DRHG---RLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYLYDP 74 D G R + + T Y YD+ +RLV T Y YDP Sbjct: 1041 DALGKQSRRVYNENTGTQLSFTDASNNTTYYDYDNLNRLVRVTDPMSGHAY----YEYDP 1096 Query: 75 LGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQPGSFTPL 134 + A R + T + + D + L Sbjct: 1097 VSNLTATRDPKSSSSTDSTY-------RTLFAHNNINQLNTLADPLLRNISNTYDRSSNL 1149 Query: 135 IRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVL 173 RV G S L ++G + Sbjct: 1150 TRVSLPNGLQINYTYDSAN-RLTSKILDNGKHYNYSYDG 1187 Score = 59.4 bits (142), Expect = 3e-07, Method: Composition-based stats. Identities = 33/268 (12%), Positives = 66/268 (24%), Gaps = 43/268 (16%) Query: 8 ARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVE 67 + + YD GRL + +D +R Y Y++ +L T Sbjct: 457 RDNNTTTFTYDASGRLYQLSD---------PSDRKLTYTYNTSGQLSAMTDP-------- 499 Query: 68 SRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQ 127 G R + ++ R L + + +D + D T + Sbjct: 500 --------GNRTYQLAYQNSRLAAVTDPL---NKTVTFAYDANGYLASLTDPLNRVTSFI 548 Query: 128 PGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILAD 187 S L + R+ + + V D Sbjct: 549 NSSDGKLQTIR---------DARTNGQDIYDTLFSQSTQTNTIVTTVIDPGSHRFTFTHD 599 Query: 188 RVSEESRRWLASCGLTVEQMQNQMDPVYTPARK-IHLYHCDHRGLPLALV-----STEGA 241 + ++ G + + + + K Y D +G + Sbjct: 600 YSTGNLTKYQDQLGNSWQYSWSSNSLITAQDAKGTITYEYDTKGNIIKKTITVDNDANNN 659 Query: 242 TEWCAEYDEWGNLLNEENPHQLQQLIRL 269 YDE+ LL + + + Sbjct: 660 IIQTMTYDEYNQLLEFVDGSGRKTSYKY 687 Score = 46.7 bits (109), Expect = 0.002, Method: Composition-based stats. Identities = 29/227 (12%), Positives = 70/227 (30%), Gaps = 20/227 (8%) Query: 4 DNRIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAE 63 + + D + Y YD +LT+ + ++ T+ Y +D L + Sbjct: 1395 NGNMTSDGTFNYTYDTESQLTQVKRVSDNSLVA-----TYNYRHDG---LRTSKTVYSGQ 1446 Query: 64 PLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKP--QVTWYGWD------GDRLTTI 115 + + +D GR V + + + + + Y ++ GD Sbjct: 1447 TSQTTYFNWDAFGRLVRESDSAGNVSFYNYDNQGKLVCFRKNNYTYEVHLNLRGDVYLLT 1506 Query: 116 QNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQ 175 D Y + I + +G ++ R + +++G S + P L + Sbjct: 1507 NIDGG-FYAKYNYDPWGNQI---SYSGWISAPFRYAGYYYDEETGLYYLKSRYYSPALGR 1562 Query: 176 MLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIH 222 L + + + + + + + V + + K Sbjct: 1563 FLTKDSIKYIKYKNPQTLNLYSYAGSNPVNNVDPTGEIPVRATWKAF 1609 Score = 44.0 bits (102), Expect = 0.013, Method: Composition-based stats. Identities = 28/214 (13%), Positives = 57/214 (26%), Gaps = 27/214 (12%) Query: 70 YLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQPG 129 Y Y G T +L ++ + + G +L+ D + T Y Sbjct: 1027 YTYSASGN----------YLTTSEDALGKQSRRVYNENTGTQLSF--TDASNNTTYYDYD 1074 Query: 130 SFTPLIRVETATGELAKTQRR--SLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILAD 187 + L+RV A + S + + + + + Sbjct: 1075 NLNRLVRVTDPMSGHAYYEYDPVSNLTATRDPKSSSSTDSTYRTLFAHNNINQLNTLADP 1134 Query: 188 RVSEESRRWLASCGLTVEQMQNQMDPVYT------------PARKIHLYHCDHRGLPLAL 235 + S + S LT + N + YT K + Y D +++ Sbjct: 1135 LLRNISNTYDRSSNLTRVSLPNGLQINYTYDSANRLTSKILDNGKHYNYSYDGANNLISV 1194 Query: 236 VSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRL 269 + +YD G + + + Sbjct: 1195 TDQD-NKSCLWDYDGAGRVKYSTDSFGYRLDYTW 1227 >UniRef50_D0KW21 YD repeat protein n=1 Tax=Halothiobacillus neapolitanus c2 RepID=D0KW21_HALNC Length = 1681 Score = 182 bits (461), Expect = 3e-44, Method: Composition-based stats. Identities = 81/438 (18%), Positives = 119/438 (27%), Gaps = 67/438 (15%) Query: 11 AHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRY 70 Y+YD RL D P ++ Y Sbjct: 1266 QALQYQYDDALRLIAAEDGSPRDNRGHKGGKS--------------GSRNGNTGSNAESY 1311 Query: 71 LYDPLGRRVAKRVWRRERDLTGWMSLS-RKPQVTWYGWDGDRLTTIQNDRTRIQTIYQPG 129 YD + + LT T Y +D + T Y Sbjct: 1312 QYDAASNLTDITIGKTSIALTINALNQIVTAGSTAYRYDANGNLLDDGINT-----YTWD 1366 Query: 130 SFTPLIRVETA-TGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADR 188 + L+ + TG ++ L+ + + + GG+ P L A Sbjct: 1367 AADRLVTITNQQTGHTSQFAYDGLSRRISVTETDSGGT----PETTHYLWCGTRICEARD 1422 Query: 189 VSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWCAEY 248 S+ + G I Y D G +A V +G +Y Sbjct: 1423 SSDTVLARYYAQGE-------------RHGSTIAYYAQDQVGSVVATVDPQGQITSRLKY 1469 Query: 249 DEWGNLLNEENPHQLQQLIRLPGQQYDEESGLYYNRHRYYDPLQGRYITQDPIGLKGGWN 308 D +GN++ R +S LY +R YDP GR++++DPI GG N Sbjct: 1470 DSYGNIIQSSGTLP---DYRYAELYAHPQSSLYLATYRAYDPKIGRWLSRDPIRETGGIN 1526 Query: 309 FYQYP-LNPVQYIDSMGL-----------------------ASKYGHLNNGGYGARPNKP 344 Y Y NPV ID GL Y + G G Sbjct: 1527 LYAYVTSNPVINIDPKGLDIWIEGPSGPEPSFHQSVNVGNMNGYYDSYSFGMDGQGIEGK 1586 Query: 345 PTPDPSKLPDIAKQLRLPYPIDQASSAPNVFKTFFRALSPYDYTLYCRKWVKPNLTCTPQ 404 D I R D+ + K + Y + CR W + P Sbjct: 1587 VYRDHDPGGQIENYKRTTSEQDRIFKSEMDKKLGNTGI--YGWDDICRSWSQRQFKNAPG 1644 Query: 405 DDSQYPGMDTKTASDYLP 422 SQ P + P Sbjct: 1645 IPSQSPVRKVSPHWNVSP 1662 Score = 76.4 bits (186), Expect = 2e-12, Method: Composition-based stats. Identities = 43/262 (16%), Positives = 76/262 (29%), Gaps = 42/262 (16%) Query: 14 LYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVES----- 68 Y YD GR+ TD + T RY YD+ +RL T V Sbjct: 875 SYTYDGFGRVASSTDS---------EGHTLRYSYDALNRLTTVTYPDGTSRTVTWGKLDP 925 Query: 69 -----------RYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQN 117 Y YD + ++K + G+ + + +T +G+ T ++ Sbjct: 926 VATTDREGRTTTYAYDSVRDLISKTDPMNQVTQYGYYANGKLESLT--DPNGNTSTWARD 983 Query: 118 DRTRIQ---------TIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVV 168 R+ T Y +I A G+ +L D L + Sbjct: 984 IEGRVTGKTYPDGSQTGYTYDITGRVIERSDALGQNTAYSY-ALDDRLIGISYSNALQPT 1042 Query: 169 FPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDH 228 L D + + + L Q+ ++ + + + Sbjct: 1043 AAVQLGYDASYPRLTTRTDGQGTTTYGYYPAGVLGAGQLASEQGQNSHDSLQYTY---NA 1099 Query: 229 RGLPLALVSTEGATEWCAEYDE 250 GL + +GA +YD Sbjct: 1100 LGLLASQT-VDGA-TERYQYDA 1119 Score = 64.8 bits (156), Expect = 6e-09, Method: Composition-based stats. Identities = 38/227 (16%), Positives = 59/227 (25%), Gaps = 27/227 (11%) Query: 9 RDAHYLYRYDRHGRLTEKTDLIPEGVIRTDD-----------ERTHRYHYDSQHRLVHYT 57 Y YD RLT T T RT Y YDS L+ T Sbjct: 891 EGHTLRYSYDALNRLTTVTYPDGTSRTVTWGKLDPVATTDREGRTTTYAYDSVRDLISKT 950 Query: 58 RTQYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQ-------VTWYGWDGD 110 ++Y Y G+ + R T Y +D Sbjct: 951 DPMN----QVTQYGYYANGKLESLTDPNGNTSTWARDIEGRVTGKTYPDGSQTGYTYDIT 1006 Query: 111 RLTTIQNDRTRIQTIYQPGSFTPLIRVE-----TATGELAKTQRRSLADTLQQSGGEDGG 165 ++D T Y LI + T + S ++ G+ Sbjct: 1007 GRVIERSDALGQNTAYSYALDDRLIGISYSNALQPTAAVQLGYDASYPRLTTRTDGQGTT 1066 Query: 166 SVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMD 212 + + P V +L SE + + A L + + + Sbjct: 1067 TYGYYPAGVLGAGQLASEQGQNSHDSLQYTYNALGLLASQTVDGATE 1113 Score = 64.4 bits (155), Expect = 9e-09, Method: Composition-based stats. Identities = 34/253 (13%), Positives = 69/253 (27%), Gaps = 37/253 (14%) Query: 8 ARDAHYLYRYDRHGRLTEKTDLIPEGVIR------------TDDERTHRYHYDSQHRLVH 55 Y YD L KTD + + + T + D + R+ Sbjct: 931 REGRTTTYAYDSVRDLISKTDPMNQVTQYGYYANGKLESLTDPNGNTSTWARDIEGRVTG 990 Query: 56 YTRTQYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTW----------- 104 T + ++ Y YD GR + + + + R +++ Sbjct: 991 KTYPDGS----QTGYTYDITGRVIERSDALGQNTAYSYALDDRLIGISYSNALQPTAAVQ 1046 Query: 105 --YGWDGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELA----KTQRRSLADTLQQ 158 Y RLTT + + Y P ++ + G+ + + +L Q Sbjct: 1047 LGYDASYPRLTTRTDGQGTTTYGYYPAGVLGAGQLASEQGQNSHDSLQYTYNALGLLASQ 1106 Query: 159 SGGEDGGSVVFPPVLVQMLD----RLESEILADRVSEESRRWLASCGLTVEQMQNQMDPV 214 + + + Q D + S+ + ++ G V Sbjct: 1107 TVDGATERYQYDALSRQTGDSNALGDFTTAYLGETSQPVSQTISRNGQPVPYQIQYQYEN 1166 Query: 215 YTPARKIHLYHCD 227 R++ D Sbjct: 1167 NQSDRRLKAILND 1179 Score = 62.5 bits (150), Expect = 3e-08, Method: Composition-based stats. Identities = 30/195 (15%), Positives = 60/195 (30%), Gaps = 23/195 (11%) Query: 2 WPDNRIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQY 61 +PD + Y YD GR+ E++D + + Y Y RL+ + + Sbjct: 993 YPDG-----SQTGYTYDITGRVIERSDAL---------GQNTAYSYALDDRLIGISYSNA 1038 Query: 62 AEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTR 121 +P + YD R+ R + G+ +L + Q + Sbjct: 1039 LQPTAAVQLGYDASYPRLTTRTDGQGTTTYGYYPAGVLG--------AGQLASEQGQNSH 1090 Query: 122 IQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLE 181 Y + L +T G + Q +L+ S + + Q + + Sbjct: 1091 DSLQYTYNALGLLAS-QTVDGATERYQYDALSRQTGDSNALGDFTTAYLGETSQPVSQTI 1149 Query: 182 SEILADRVSEESRRW 196 S + ++ Sbjct: 1150 SRNGQPVPYQIQYQY 1164 Score = 59.4 bits (142), Expect = 3e-07, Method: Composition-based stats. Identities = 36/269 (13%), Positives = 64/269 (23%), Gaps = 30/269 (11%) Query: 8 ARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVE 67 Y+ G +T+ D + V +V TR A + Sbjct: 758 GSTQLTRISYNPKGNVTQTVDPLGRTVNLIYATNGVD--------VVEVTRNTLAGADIL 809 Query: 68 SRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQ 127 +R Y+ Q T Y ++G T D T Y Sbjct: 810 ARLTYNA--------------QHEPLTYTDAAGQTTTYAYNGAGQRTSMTDPLGQVTTYV 855 Query: 128 PGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPV-----LVQMLDRLES 182 + L +V A G+ + + S +G ++ + S Sbjct: 856 YDANGYLQKVVNADGKTRNSYTYDGFGRVASSTDSEGHTLRYSYDALNRLTTVTYPDGTS 915 Query: 183 EILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPA--RKIHLYHCDHRGLPLALVSTEG 240 + + T + D + ++ Y G +L G Sbjct: 916 RTVTWGKLDPVATTDREGRTTTYAYDSVRDLISKTDPMNQVTQYGYYANGKLESLTDPNG 975 Query: 241 ATEWCAEYDEWGNLLNEENPHQLQQLIRL 269 D G + + P Q Sbjct: 976 N-TSTWARDIEGRVTGKTYPDGSQTGYTY 1003 Score = 52.5 bits (124), Expect = 3e-05, Method: Composition-based stats. Identities = 70/508 (13%), Positives = 124/508 (24%), Gaps = 97/508 (19%) Query: 16 RYDRHGRLTEKTDLIPEGVIRTDDE-----------RTHRYH--------Y----DSQHR 52 YD GRL + TD++ T D T ++ + D Q R Sbjct: 585 AYDSSGRLIDITDVLGMHSQFTYDGGTFITAMTTPYGTTQFASGDSGTTRWLEITDPQGR 644 Query: 53 LVHYTRTQYAEP-------------------LVESRYLYDPLGRRVAKRVWRRERDLTGW 93 A + +D A + Sbjct: 645 KERVEFRHNAPGIPFSDSPVPQGINTFNAYINSRDTFFWDK----TAMEHAPGDYTQAHI 700 Query: 94 MSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQPG---------------------SFT 132 +YG L ++++ P T Sbjct: 701 YHWLHNAAQPYYGLTAGVLESVKSPLEHRIWFSYPNQSPGVTGGFDKPSAIARVLADGST 760 Query: 133 PLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSEE 192 L R+ L T+ +G VV + + + + E Sbjct: 761 QLTRISYNPKGNVTQTVDPLGRTVNLIYATNGVDVVEVTRNTLAGADILARLTYNAQHEP 820 Query: 193 SRRWLASCGLTVEQM--QNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDE 250 A+ T Q + P ++ Y D G +V+ +G T YD Sbjct: 821 LTYTDAAGQTTTYAYNGAGQRTSMTDPLGQVTTYVYDANGYLQKVVNADGKTRNSYTYDG 880 Query: 251 WGNLLNEENPHQLQQLIRLPGQQYDEESGLYYNRHRYYDPLQGRYITQDPIGL---KGGW 307 +G + + + D + L + + DP+ +G Sbjct: 881 FGRVASSTDSEGHTLRYSY-----DALNRLTTVTYPDGTSRTVTWGKLDPVATTDREGRT 935 Query: 308 NFYQY--PLNPVQYIDSMGLASKYGHLNNGGYGA--RPNKPPTPDPSKLPDIAKQLRLPY 363 Y Y + + D M ++YG+ NG + PN + + P Sbjct: 936 TTYAYDSVRDLISKTDPMNQVTQYGYYANGKLESLTDPNGNTSTWARDIEGRVTGKTYPD 995 Query: 364 PIDQASSAPNVFKT-----FFRALSPYDYTL-------YCRKWVKPNLTCTPQDDSQYPG 411 + + + Y Y L ++P D+ YP Sbjct: 996 GSQTGYTYDITGRVIERSDALGQNTAYSYALDDRLIGISYSNALQPTAAVQLGYDASYPR 1055 Query: 412 MDTKTASDYLPQTNWPTTQLPPGYTCAE 439 + T+T + P G A Sbjct: 1056 LTTRTDGQGTTTYGY----YPAGVLGAG 1079 >UniRef50_Q48LL6 Rhs family protein n=1 Tax=Pseudomonas syringae pv. phaseolicola 1448A RepID=Q48LL6_PSE14 Length = 362 Score = 182 bits (461), Expect = 3e-44, Method: Composition-based stats. Identities = 61/204 (29%), Positives = 94/204 (46%), Gaps = 9/204 (4%) Query: 148 QRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQM 207 Q SL + + G + + R+ L + +S +L G Sbjct: 60 QYDSLGRRVAKQSEIKGQT--DHKRFLWQGLRM----LREESPGQSSLYLYEPGSYAPLA 113 Query: 208 QNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLI 267 + + K++ +H D G PL + EG W A+Y WG + + ++++Q + Sbjct: 114 RV-DEKEGEVENKVYYFHTDQIGTPLEMTDAEGQIVWQAKYRAWGAV-EKLVVNEVEQNL 171 Query: 268 RLPGQQYDEESGLYYNRHRYYDPLQGRYITQDPIGLKGGWNFYQYPLNPVQYIDSMGLAS 327 R GQ +D E+GL+YN RYYDP GR+ITQDPIGL GG N Y+Y NP ++D G A Sbjct: 172 RFQGQYFDVETGLHYNTFRYYDPEIGRFITQDPIGLDGGDNLYKYVPNPTAWVDPWGWAC 231 Query: 328 -KYGHLNNGGYGARPNKPPTPDPS 350 + G +G N P + + Sbjct: 232 NRPGGYKSGDVDTHGNLSPGVNRA 255 Score = 56.4 bits (134), Expect = 2e-06, Method: Composition-based stats. Identities = 29/163 (17%), Positives = 49/163 (30%), Gaps = 19/163 (11%) Query: 71 LYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQPGS 130 YD LGRRVAK+ + + + W G R+ ++ +Y+PGS Sbjct: 60 QYDSLGRRVAKQ-----------SEIKGQTDHKRFLWQGLRMLREESPGQSSLYLYEPGS 108 Query: 131 FTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVS 190 + PL RV+ GE+ D + +++ + V Sbjct: 109 YAPLARVDEKEGEVENKVYYFHTDQIGTPLEMTDAEGQIVWQAKYRAWGAVEKLVVNEVE 168 Query: 191 EESR---RWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRG 230 + R ++ DP D G Sbjct: 169 QNLRFQGQYFDVETGLHYNTFRYYDPEIG-----RFITQDPIG 206 >UniRef50_B6FUB3 Putative uncharacterized protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FUB3_9CLOT Length = 1321 Score = 182 bits (461), Expect = 3e-44, Method: Composition-based stats. Identities = 69/342 (20%), Positives = 108/342 (31%), Gaps = 25/342 (7%) Query: 12 HYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYL 71 Y Y YD G T T + +RY YD+ RL + + ++++Y Sbjct: 791 RYTYLYDLLGNKTGITKERRGLERESGQ---YRYGYDALGRLSEIQK----DGEIQTQYG 843 Query: 72 YDPLGRRVAKRVWRRERDLTGWMSLSRKPQVT-----WYGWDGDRLTTIQNDRTRIQTIY 126 YD G R K + + YG+D T + + Y Sbjct: 844 YDAFGNRTWKEERGEQTSYQYNALNQLVSERQGEIRKEYGYDKRGNLTAILENGAWKKRY 903 Query: 127 QPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILA 186 G+ L A G+ A+ Q L + + G + + + Sbjct: 904 VYGAMNRLEEAVDAAGKQARYQYNGLGHRVGKQEGVLPKEKLEKLDPQRRVGMEIGNSRQ 963 Query: 187 DRVSEESRRWLASCGLTVEQ------MQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEG 240 + + R + E+ + Y + + Y D G PL L + G Sbjct: 964 ITYTLDLTRQYYNLLERTEESQSQRYFWDGNVAAYEENGERNYYLQDELGSPLRLEDSVG 1023 Query: 241 ATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEESGLYYNRHRYYDPLQGRYITQDP 300 + Y +G L + Q G Q DE +G YY + R Y GR+ QD Sbjct: 1024 TIKENYGYGAFGEDLYQN--QGKIQPFGYTGYQRDEIAGTYYAQAREYLAENGRFAGQDL 1081 Query: 301 ----IGLKGGWNFYQYP-LNPVQYIDSMGLASKYGHLNNGGY 337 I N Y Y NP +Y+D G G+ Sbjct: 1082 IVGFIEYPETLNRYGYCWDNPFKYVDYDGEFPTIIAGAGIGF 1123 Score = 71.4 bits (173), Expect = 7e-11, Method: Composition-based stats. Identities = 43/292 (14%), Positives = 81/292 (27%), Gaps = 43/292 (14%) Query: 4 DNRIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQY-- 61 + R Y D G++TE D + + Y YD + +L+ + Sbjct: 592 NGRKRLCQITRYTRDLRGQVTETVDAL---------GQKETYTYDKKGQLLGKLDKEGYL 642 Query: 62 -------AEPLVESRY--------LYDPLGRRVAKRVWRRERDLTGW--------MSLSR 98 L +Y Y+PL + + + W +T Sbjct: 643 TKYAYTKQGDLSGIQYADGKEVKLSYNPLRQLIEIQDWLGSTRITPDALGRAQKVQYPDG 702 Query: 99 KPQVTWYGWDGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQ 158 + YG G+R + D + Y L E G+ T L + Sbjct: 703 REVSYTYGKAGERRSITYPDGKTVFYGYDE----QLRLSELKEGDSVITYGYDPVGRLCE 758 Query: 159 SGGEDGGSVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPA 218 +G + L L + + + + T + + + Sbjct: 759 KQFPNGTKTTYAYDKKDQLTELLHQDQEGILDRYTYLYDLLGNKTGITKERRGLERESGQ 818 Query: 219 RKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRLP 270 + Y D G + +G + YD +GN +E + Q + Sbjct: 819 ---YRYGYDALGRLSEIQ-KDGEIQTQYGYDAFGNRTWKEERGE-QTSYQYN 865 Score = 68.3 bits (165), Expect = 7e-10, Method: Composition-based stats. Identities = 41/303 (13%), Positives = 74/303 (24%), Gaps = 43/303 (14%) Query: 10 DAHYLYRYDRHGRLTEKTDLIP------------EGVIRTDDERTHRYHYDSQHRLVHYT 57 Y YD+ G+L K D I+ D + + Y+ +L+ Sbjct: 619 GQKETYTYDKKGQLLGKLDKEGYLTKYAYTKQGDLSGIQYADGKEVKLSYNPLRQLIEIQ 678 Query: 58 RTQYAEP----------------LVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQ 101 + E Y Y G R + + G+ R + Sbjct: 679 DWLGSTRITPDALGRAQKVQYPDGREVSYTYGKAGERRSITYPDGKTVFYGYDEQLRLSE 738 Query: 102 ------VTWYGWDGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADT 155 V YG+D + +T Y L + E + L D Sbjct: 739 LKEGDSVITYGYDPVGRLCEKQFPNGTKTTYAYDKKDQLTELLHQDQEGILDRYTYLYDL 798 Query: 156 L-QQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPV 214 L ++G + L++ + + + + Sbjct: 799 LGNKTGITKERRGLERESGQYRYGYDALGRLSEIQKDGEIQTQYGYDAFGNRTWKEERGE 858 Query: 215 YTPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQY 274 T Y + + +G YD+ GNL ++ Sbjct: 859 QTS------YQYNALN--QLVSERQGEIRKEYGYDKRGNLTAILENGAWKKRYVYGAMNR 910 Query: 275 DEE 277 EE Sbjct: 911 LEE 913 Score = 66.8 bits (161), Expect = 2e-09, Method: Composition-based stats. Identities = 42/306 (13%), Positives = 76/306 (24%), Gaps = 54/306 (17%) Query: 10 DAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERT---------------------HRYHYD 48 YRYD RL E EG+++ D E + RY D Sbjct: 547 GNETEYRYDVCDRLIEIRQYGAEGILKEDTEVSGMDAKLLEAERQNGRKRLCQITRYTRD 606 Query: 49 SQHRLVHYTRTQYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYG-- 106 + ++ + Y YD G+ + K + + + Sbjct: 607 LRGQVTETVDALG----QKETYTYDKKGQLLGKLDKEGYLTKYAYTKQGDLSGIQYADGK 662 Query: 107 -----WDGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGG 161 ++ R D I P + +V+ G + + Sbjct: 663 EVKLSYNPLRQLIEIQDWLGSTRI-TPDALGRAQKVQYPDGREVSYTYGKAGERRSITY- 720 Query: 162 EDGGSVVFPPVLVQMLDRLESEILADRVSEESRRWL----ASCGLTVEQMQNQMDPVYTP 217 DG +V + L L+ + L G ++ D + Sbjct: 721 PDGKTVFYGYDEQLRLSELKEGDSVITYGYDPVGRLCEKQFPNGTKTTYAYDKKDQLTEL 780 Query: 218 ARK-------IHLYHCDHRGLPLALVS-------TEGATEWCAEYDEWGNLLNEENPHQL 263 + + Y D G + G + YD G L + ++ Sbjct: 781 LHQDQEGILDRYTYLYDLLGNKTGITKERRGLERESGQ--YRYGYDALGRLSEIQKDGEI 838 Query: 264 QQLIRL 269 Q Sbjct: 839 QTQYGY 844 Score = 52.9 bits (125), Expect = 3e-05, Method: Composition-based stats. Identities = 43/261 (16%), Positives = 71/261 (27%), Gaps = 30/261 (11%) Query: 44 RYHYDSQHRLVHYTRTQYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKP--- 100 +Y Y +L T E+ Y YD R + R + E L +S Sbjct: 530 QYAYTLSGQLAKVTDALGN----ETEYRYDVCDRLIEIRQYGAEGILKEDTEVSGMDAKL 585 Query: 101 -------------QVTWYGWDGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKT 147 Q+T Y D T D + Y L+ G L K Sbjct: 586 LEAERQNGRKRLCQITRYTRDLRGQVTETVDALGQKETYTYDKKGQLLGKLDKEGYLTKY 645 Query: 148 QRRSLADTLQQSGGEDGGSVVFPPVLVQML----DRLESEILADRVSEESRRWLASCGLT 203 D + + L Q++ + I D + + Sbjct: 646 AYTKQGDLSGIQYADGKEVKLSYNPLRQLIEIQDWLGSTRITPDALGRAQKVQYPDGREV 705 Query: 204 VEQMQNQMD--PVYTPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPH 261 + + P K Y D + L EG + YD G L ++ P+ Sbjct: 706 SYTYGKAGERRSITYPDGKTVFYGYDEQLRLSEL--KEGDSVITYGYDPVGRLCEKQFPN 763 Query: 262 QLQQLIRLPGQQYDEESGLYY 282 + + D+ + L + Sbjct: 764 GTKTTYAYDKK--DQLTELLH 782 >UniRef50_B9M2L6 YD repeat protein n=6 Tax=Geobacter sp. FRC-32 RepID=B9M2L6_GEOSF Length = 1348 Score = 181 bits (460), Expect = 4e-44, Method: Composition-based stats. Identities = 75/347 (21%), Positives = 115/347 (33%), Gaps = 44/347 (12%) Query: 7 IARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLV 66 + Y YD +G +T T+ + D+ + Y YDS RL P Sbjct: 933 TGTLQNLTYGYDANGNITAITNTL-------DNTKNKSYTYDSLDRL-----GSGTGPWG 980 Query: 67 ESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVT-----WYGWDGDRLTTIQNDRTR 121 + YD +G R + + +R +T +G+D + T +N + Sbjct: 981 TITWTYDGVGNRQTQIDSSGTSSYSYQSGSNRLTGITGANPATFGYDTNGNTATENGK-- 1038 Query: 122 IQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLE 181 IY LI+ A E + +++ +F + + Sbjct: 1039 ---IYTYNQNQRLIQA--AANETGSYSYNAQGQRTKKTVNGVTTYFIFDQQGQLLTESAT 1093 Query: 182 SEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGA 241 + A+ + + A + H DH G P + Sbjct: 1094 NGTQAEYI-----------------YLSNQPLAKIDATGTNYVHTDHLGTPTMMTDAAAT 1136 Query: 242 TEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEESGLYYNRHRYYDPLQGRYITQDPI 301 W E +G+ N L +R PGQ D ESGL YN R Y+P GRYI DP+ Sbjct: 1137 KVWEIEARPFGDSANITGTASL--NLRFPGQYADSESGLNYNYFRDYNPGIGRYIQADPV 1194 Query: 302 GLKGGWNFYQYPLN-PVQYIDSMGLASKYGHLNNGGYGARPNKPPTP 347 GL G + Y N P+ D +GL K G P Sbjct: 1195 GLDEGVTLFIYSGNDPILNEDPLGLWVKRCSRALGNKNKPKTSKYNP 1241 Score = 80.6 bits (197), Expect = 1e-13, Method: Composition-based stats. Identities = 36/283 (12%), Positives = 65/283 (22%), Gaps = 32/283 (11%) Query: 5 NRIARDAH-----YLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRT 59 NR+ + + + YD G T D YD+ RL + Sbjct: 664 NRLKQIKNPDATYTEFGYDALGNRTSSKDPKQNLTTS---------QYDALSRLTATIQP 714 Query: 60 QYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSR-------KPQVTWYGWDGDRL 112 V + + YD + L R T Y +D Sbjct: 715 ----GNVTTGFTYDTNNNLTTVTDANSNSTTYKYDDLGRVYQTISPDTNTTTYSYDPAGN 770 Query: 113 TTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPV 172 + D I Y L R T + + + S Sbjct: 771 LKTKTDAKGIIIAYTYDDANRLTRTSFPTDPAITYSYDTCINGKGRVCTITDQSGTTTYE 830 Query: 173 LVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLP 232 + + D ++ ++ G T + + + Y D Sbjct: 831 YTKKGQIAKETRTIDGIAYITQYTYDMNGNTKTIIYPSGRVI------TYSYSNDKPTTV 884 Query: 233 LALVST-EGATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQY 274 + + Y +G + + L + I Q Sbjct: 885 SSTYAGITTTIANNISYKPFGGMTALTYGNGLARTITYDNQYR 927 Score = 66.0 bits (159), Expect = 3e-09, Method: Composition-based stats. Identities = 43/310 (13%), Positives = 78/310 (25%), Gaps = 62/310 (20%) Query: 3 PDNRIARDAH--------YLYRYDRHGRLTEKTDL-------------IPEGVIRTDDER 41 + R+ R + YD +G + KT+ G I + Sbjct: 496 ANGRVTRIDGPRTDVQDVTTFTYDANGNMLTKTEALIGTTRYDNYDALGNPGTITDPNGN 555 Query: 42 THRYHYDSQHRLVHYTRTQYAEPLVESRYLYD-------------------PLGRRVAKR 82 Y YD+ R + P + Y Y P G R+ Sbjct: 556 ATTYTYDTAGRALFVKAPGDINP---TEYTYTTGGCGSCGGSTNRIASIIQPEGNRI-DY 611 Query: 83 VWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRI---QTIYQPGSFTPLIRVET 139 + LT Y +G++L D + I YQ L +++ Sbjct: 612 TYDTNGKLTKIADSQNNSINYSYDSEGNKLKEEIKDPSGILQKTISYQYDVINRLKQIKN 671 Query: 140 ATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSEESRRWLAS 199 + +L + + + D L + + + Sbjct: 672 PDATYTEFGYDALGNRTSSKDPKQNLTTS-------QYDALSRLTATIQPGNVTTGFTYD 724 Query: 200 CGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEEN 259 + + + T Y D G +S + T YD GNL + + Sbjct: 725 TNNNLTTVTDANSNSTT-------YKYDDLGRVYQTISPDTNTT-TYSYDPAGNLKTKTD 776 Query: 260 PHQLQQLIRL 269 + Sbjct: 777 AKGIIIAYTY 786 Score = 63.7 bits (153), Expect = 2e-08, Method: Composition-based stats. Identities = 42/252 (16%), Positives = 73/252 (28%), Gaps = 21/252 (8%) Query: 13 YLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDS-QHRLVHYTRTQYAEPLVE--SR 69 Y YD G + T T E+ Y YD + + P + + Sbjct: 408 INYTYDSIGNVLTSTQAPG-----TPQEKQAIYTYDPTFNHQTSESAASVVNPAISKITS 462 Query: 70 YLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGD-RLTTIQNDRTRIQ--TIY 126 + YD G R + D T + T Y D + R+T I RT +Q T + Sbjct: 463 HTYDSKGNRQSTTETGLLGDGTPYSYA------TTYENDANGRVTRIDGPRTDVQDVTTF 516 Query: 127 QPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILA 186 + ++ A + +G + + R Sbjct: 517 TYDANGNMLTKTEALIGTTRYDNYDALGNPGTITDPNGNATTYTYDT---AGRALFVKAP 573 Query: 187 DRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWCA 246 ++ + + N++ + P Y D G + ++ + Sbjct: 574 GDINPTEYTYTTGGCGSCGGSTNRIASIIQPEGNRIDYTYDTNGKLTKIADSQNNSIN-Y 632 Query: 247 EYDEWGNLLNEE 258 YD GN L EE Sbjct: 633 SYDSEGNKLKEE 644 Score = 52.9 bits (125), Expect = 3e-05, Method: Composition-based stats. Identities = 40/333 (12%), Positives = 65/333 (19%), Gaps = 95/333 (28%) Query: 9 RDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYT----------- 57 Y YD G L KTD + Y YD +RL + Sbjct: 757 DTNTTTYSYDPAGNLKTKTDAKGIII---------AYTYDDANRLTRTSFPTDPAITYSY 807 Query: 58 ---------------------------------RTQYAEPLVESRYLYDPLGRR------ 78 ++Y YD G Sbjct: 808 DTCINGKGRVCTITDQSGTTTYEYTKKGQIAKETRTIDGIAYITQYTYDMNGNTKTIIYP 867 Query: 79 ----------------VAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTI------- 115 V+ + +S +T + G+ L Sbjct: 868 SGRVITYSYSNDKPTTVSSTYAGITTTIANNISYKPFGGMTALTY-GNGLARTITYDNQY 926 Query: 116 ------QNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVF 169 + Y I + SL +G + + Sbjct: 927 RISTMITGTLQNLTYGYDANGNITAITNTLDNTKNKSYTYDSLDRLGSGTGPWGTITWTY 986 Query: 170 PPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDP-VYTPARKIHLYHCDH 228 V + S + S R G + T KI+ Y+ + Sbjct: 987 DGVGNRQTQIDSSGTSSYSYQSGSNRLTGITGANPATFGYDTNGNTATENGKIYTYNQNQ 1046 Query: 229 RGLPLALVSTEGATEWCAEYDEWGNLLNEENPH 261 R L+ Y+ G + Sbjct: 1047 R-----LIQAAANETGSYSYNAQGQRTKKTVNG 1074 >UniRef50_C8W2V9 YD repeat protein n=3 Tax=Desulfotomaculum acetoxidans DSM 771 RepID=C8W2V9_DESAS Length = 2658 Score = 181 bits (460), Expect = 4e-44, Method: Composition-based stats. Identities = 63/313 (20%), Positives = 111/313 (35%), Gaps = 44/313 (14%) Query: 29 LIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYLYDPLGRRVAKRVWRRER 88 + TH + YD+ RL +T ++ Y YD G + K Sbjct: 2243 ADGTISGYSSWNGTHSFSYDADGRLASWTH-----GGIQQNYTYDAAGNLLTK------- 2290 Query: 89 DLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQ 148 + + ++T G+ D+ + D + Y + L+RV A+ Sbjct: 2291 -GNRTFAYNNINEITSPGFTYDQNGNMTGDGS---FNYTYNALNQLVRVNKASDGSLVAT 2346 Query: 149 RRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQ 208 D +++ G+ + L R + + G + Sbjct: 2347 YTYNHDGTRRNKVTAQGTTNYNWDASGNLIREIG-------PNGTYCYYYVSGKLIA--- 2396 Query: 209 NQMDPVYTPARKIHLYHCDHRGLPLA--LVSTEGAT--EWCAEYDEWGNLLNEENPHQLQ 264 + +++++ H + RG ++ + G T E +YD WG + E+ ++ Sbjct: 2397 ------FENNQQLYIVHDNLRGDVISLSMTDDYGNTDQENRYDYDPWGTPICED--ESVK 2448 Query: 265 QLIRLPGQQYDEESGLYYNRHRYYDPLQGRYITQDPIGL-----KGGWNFYQYP-LNPVQ 318 R G YD E+GLYY + RYY P GR++T+DP N Y Y NPV Sbjct: 2449 SPFRYAGYYYDTETGLYYLKSRYYSPALGRFLTRDPHSFINHADPQTLNLYAYCGNNPVS 2508 Query: 319 YIDSMGLASKYGH 331 +D G + Sbjct: 2509 TVDPTGHWDEEPS 2521 Score = 65.6 bits (158), Expect = 4e-09, Method: Composition-based stats. Identities = 31/238 (13%), Positives = 62/238 (26%), Gaps = 33/238 (13%) Query: 15 YRYDRH-GRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYLYD 73 Y YD + G + D + + T ++YD+ +RL+ T + Y YD Sbjct: 1967 YAYDANVGNMIGHADPL--------NHITW-FNYDTLNRLIRVTDPLNRKAY----YQYD 2013 Query: 74 PLGRRVAKRVWRRERDLTGWMSL--------------SRKPQVTWYGWDGDRLTTIQNDR 119 P+ + R R S + + Y +D T Sbjct: 2014 PVSNLIYTRDPRSASSSDNTYSTFYGPNNLNRLSALTDSQNRSATYTYDRSGNLTGIALP 2073 Query: 120 TRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGG-SVVFPPVLVQMLD 178 + + L ++ + G+ + + + G S + Sbjct: 2074 NGQSESLEYDNANRLSKITLSDGKYYNYYYDGAGELISVTDQNGAGCSWNYDGAHRVTGT 2133 Query: 179 RLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPA----RKIHLYHCDHRGLP 232 + ++S G+ I Y+ D +G Sbjct: 2134 TDPLGYQLNYSLDKSGNLELESGIDYSCHYKYDGGNNIYKLYLPGAIIYYNRDGQGRV 2191 Score = 64.4 bits (155), Expect = 9e-09, Method: Composition-based stats. Identities = 33/231 (14%), Positives = 64/231 (27%), Gaps = 29/231 (12%) Query: 5 NRIARDAH-----YLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRT 59 NR+ R Y+YD L D P +D+ + Y ++ +RL T + Sbjct: 1995 NRLIRVTDPLNRKAYYQYDPVSNLIYTRD--PRSASSSDNTYSTFYGPNNLNRLSALTDS 2052 Query: 60 QYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVT-------WYGWDGDRL 112 Q Y YD G + + + + + +R ++T Y +DG Sbjct: 2053 QNRSA----TYTYDRSGNLTGIALPNGQSESLEYDNANRLSKITLSDGKYYNYYYDGAGE 2108 Query: 113 TTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPV 172 D+ + + G + +SG + + Sbjct: 2109 LISVTDQNGAGCSWNYDGAHRVTGTTDPLGYQLNYSLDKSGNLELESGIDYSCHYKYDGG 2168 Query: 173 LVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHL 223 L I+ + + +P Y ++H Sbjct: 2169 NNIYKLYLPGAII-----------YYNRDGQGRVFNVEYNPSYIVNHQLHY 2208 Score = 59.4 bits (142), Expect = 3e-07, Method: Composition-based stats. Identities = 28/269 (10%), Positives = 75/269 (27%), Gaps = 40/269 (14%) Query: 13 YLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYLY 72 Y YD +GRL++ D + Y Y+S ++ + R+ Y Sbjct: 1342 TTYTYDNNGRLSQLYDASGRKI---------TYAYNSAGQVTSISDPANH----AYRFTY 1388 Query: 73 DPLGRRVAKRVWRRERDLTGWMSLSR-------KPQVTWYGWDGDRLTTIQNDRTRIQTI 125 + ++ + S + T + + + ND Sbjct: 1389 -QNNKLISATDPSNNTFTLSYDSNGHLNSFTDPLNRKTTFNINPNGQLLSYNDARSNDQD 1447 Query: 126 YQPGSFTPLIR-------VETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLD 178 + +F ++ + + L + G + + + Sbjct: 1448 FYTTTFNQFLQSNTMVTTITDPGNRTNTYHHDNNTGNLIKQQDGVGNTWNYTWTDNNLTQ 1507 Query: 179 RLESEILADRVSEE-------SRRWLASCGLTVEQM-----QNQMDPVYTPARKIHLYHC 226 +++ + + + ++ G + + N++ + Y Sbjct: 1508 SQDAKGTTNCQYDNMGNMTQKTITVDSNPGNNIIETMTYNNYNELLTKKDNNGRETNYTY 1567 Query: 227 DHRGLPLALVSTEGATEWCAEYDEWGNLL 255 + +G L+ YD++GN++ Sbjct: 1568 NSQGNLLSTSDPNEKASSSYSYDQYGNII 1596 Score = 57.1 bits (136), Expect = 2e-06, Method: Composition-based stats. Identities = 32/277 (11%), Positives = 65/277 (23%), Gaps = 33/277 (11%) Query: 7 IARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLV 66 I H Y Y + P I ++ T Y YD+ RL Y Sbjct: 1316 INDKKHNTYTY---------QNNKPTQSIDRNNNIT-TYTYDNNGRLSQL----YDASGR 1361 Query: 67 ESRYLYDPLGRRVAKRVWRRERDLTGWMS------LSRKPQVTWYGWDGDRLTTIQNDRT 120 + Y Y+ G+ + + + +D + D Sbjct: 1362 KITYAYNSAGQVTSISDPANHAYRFTYQNNKLISATDPSNNTFTLSYDSNGHLNSFTDPL 1421 Query: 121 RIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRL 180 +T + L+ A + LQ S + +R Sbjct: 1422 NRKTTFNINPNGQLLSYNDARSNDQDFYTTTFNQFLQ--------SNTMVTTITDPGNRT 1473 Query: 181 ESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRG-----LPLAL 235 + + ++ + A+ D+ G Sbjct: 1474 NTYHHDNNTGNLIKQQDGVGNTWNYTWTDNNLTQSQDAKGTTNCQYDNMGNMTQKTITVD 1533 Query: 236 VSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQ 272 + Y+ + LL +++ + + Q Sbjct: 1534 SNPGNNIIETMTYNNYNELLTKKDNNGRETNYTYNSQ 1570 Score = 52.1 bits (123), Expect = 4e-05, Method: Composition-based stats. Identities = 23/158 (14%), Positives = 45/158 (28%), Gaps = 29/158 (18%) Query: 3 PDNRIARDAHYLYRYDRH-GRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQY 61 P NR Y +D + G L ++ D T Y + + + L + Sbjct: 1469 PGNRTN-----TYHHDNNTGNLIKQQD---------GVGNTWNYTW-TDNNLTQSQDAKG 1513 Query: 62 AEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTR 121 YD +G K + + + Y + + L T +++ R Sbjct: 1514 TTNCQ-----YDNMGNMTQKTITVDSNPG------NNIIETMTYN-NYNELLTKKDNNGR 1561 Query: 122 IQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQS 159 Y S L+ + + + + Q Sbjct: 1562 ETN-YTYNSQGNLLSTSDPNEKASSSYSYDQYGNIIQY 1598 >UniRef50_A9GD22 Conserved carbohydrate-binding protein, Rhs family n=2 Tax=Sorangium cellulosum 'So ce 56' RepID=A9GD22_SORC5 Length = 1351 Score = 181 bits (459), Expect = 4e-44, Method: Composition-based stats. Identities = 83/409 (20%), Positives = 121/409 (29%), Gaps = 62/409 (15%) Query: 7 IARDAHYLYRYDRHGRLTEKTDLIPE------------GVIRTDDERTHRYHY------- 47 + YD GR+ ++ P G + Y Sbjct: 785 LPDGGRIQVVYDALGRMAQRWVGHPAKAGAGEGRPEWVGPRPPGTTVYQAFRYGPCSELV 844 Query: 48 --------------DSQHRLVHYTRTQYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGW 93 D+ +L+ + R+ YD G E+ G Sbjct: 845 ESWDDALGRRLFEHDAAGQLLGIRDERGRG----QRFAYDAAGNL---HEPDGEQRAYGA 897 Query: 94 MSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLA 153 + + T Y WD D T Y + L VE G + + A Sbjct: 898 GNRLVQKGGTTYAWDESGRLMSARDAEGRLTRYTWNALGLLAAVEKPGGRVVEHSYDPFA 957 Query: 154 DTLQQSGG----EDGGSVVFPPVLVQMLDRLESEI-----LADRVSEESRRWLASCGLTV 204 + + + V V L EI E R + Sbjct: 958 RRIGKRTFERAPDGRRREVSSVRFVWDGGVLVHEIKRVAQATGDPVVEERTYCFEEARYA 1017 Query: 205 EQMQNQMDPVYTPARK--IHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQ 262 + Y D G P LV G + +G + E Sbjct: 1018 PWAHRDTRVAGGRREESPWFHYLNDDVGAPERLVGPAGEVVCELDRSAFGAKVKEGGRTT 1077 Query: 263 LQQLIRLPGQQYDEESGLYYNRHRYYDPLQGRYITQDPIGLKGGWNFYQYPLN-PVQYID 321 +R PGQ DEE+GL YNR+RY+DP GRY++ DP GL GG+N + Y N P +++D Sbjct: 1078 --TPLRFPGQYEDEETGLVYNRYRYFDPALGRYLSADPAGLDGGFNGFDYAGNAPTRFVD 1135 Query: 322 SMGLASKYGHLNNGGYGARPNKPPTPDPSKLPDIAKQLRLPYPIDQASS 370 GL N G PD D + +P I+ S Sbjct: 1136 PSGLMPFSTVRNAAGNN--------PDNKDFTDPKNRRGVPGDIEGKSQ 1176 Score = 66.0 bits (159), Expect = 3e-09, Method: Composition-based stats. Identities = 42/288 (14%), Positives = 71/288 (24%), Gaps = 38/288 (13%) Query: 5 NRIARDAHYL-----YRYDRHGRLTEKTDLIPEGVIRT------------DDERTHRYHY 47 R+ R + RYD GR+ + + Y Sbjct: 608 GRLVRAENARGDVYLMRYDTAGRMVYERTFAGLEKYYRHDMAGQLLHEKTGAGELTEFTY 667 Query: 48 DSQHRLVHYTRTQYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMS---------LSR 98 D+ +LV T A + YD G+ +A E T S Sbjct: 668 DAAGQLVQRTLPDGA----TESFEYDHCGQLIAAVTPAGELTFTRNAVGWVVEERQIASG 723 Query: 99 KPQVTWYGWDGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQ 158 +D + + + +V +L + + Sbjct: 724 DAFFVRRTYDLMGNVVQRTTSLGHSAAFARDACGRATQVVLDGRTAVGVAHDALGREIAR 783 Query: 159 SGGEDGGSVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQ-------NQM 211 + + G V L +M R E W+ Q +++ Sbjct: 784 ALPDGGRIQVVYDALGRMAQRWVGHPAKAGAGEGRPEWVGPRPPGTTVYQAFRYGPCSEL 843 Query: 212 DPVYTPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEEN 259 + A L+ D G L + G YD GNL + Sbjct: 844 VESWDDALGRRLFEHDAAGQLLGIRDERGR-GQRFAYDAAGNLHEPDG 890 Score = 65.6 bits (158), Expect = 4e-09, Method: Composition-based stats. Identities = 40/268 (14%), Positives = 75/268 (27%), Gaps = 32/268 (11%) Query: 6 RIARDAHYLYRYDRHGRLTEKTDLIPEGV------------IRTDDERTHRYHYDSQHRL 53 R Y +DR+G + IR + +R YD + RL Sbjct: 551 RHPDGGVTRYAHDRNGDVVRVDHPDGTSTRFDRGGLHKVCAIRRPNGEVNRLGYDREGRL 610 Query: 54 VHYTRTQYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSL-------SRKPQVTWYG 106 V + L+ YD GR V +R + + ++T + Sbjct: 611 VRAENARGDVYLM----RYDTAGRMVYERTFAGLEKYYRHDMAGQLLHEKTGAGELTEFT 666 Query: 107 WDGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGS 166 +D + ++ LI T GEL R ++ +++ G + Sbjct: 667 YDAAGQLVQRTLPDGATESFEYDHCGQLIAAVTPAGEL-TFTRNAVGWVVEERQIASGDA 725 Query: 167 VVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTP----ARKIH 222 M + ++ + +R +CG + + + V R+I Sbjct: 726 FFVRRTYDLMGNVVQRTTSLGHSAAFAR---DACGRATQVVLDGRTAVGVAHDALGREIA 782 Query: 223 LYHCDHRGLPLALVSTEGATEWCAEYDE 250 D G + G Sbjct: 783 RALPDG-GRIQVVYDALGRMAQRWVGHP 809 Score = 63.3 bits (152), Expect = 2e-08, Method: Composition-based stats. Identities = 44/282 (15%), Positives = 76/282 (26%), Gaps = 38/282 (13%) Query: 17 YDRHGRLTEKTDLIPEGVIRTDDERTHRYHY-DSQHRLVHYTRTQYAEPLVESRYLYDPL 75 YD +G L TD + D R D R + + DP Sbjct: 396 YDENGNLRSFTDPLGATTTWVRDARGRTLRVSDPLGR-TTVIEREPDGHIRRVT---DPA 451 Query: 76 GRRVAKRVWRRERDLTGWMSLSR----------------KPQVTWYGWDGDRLTTIQNDR 119 G T + + T + D + D Sbjct: 452 GGITEVTRTAGALYWTDPIGATFEVRVEARGLIKETVAPNGARTRFLHDAHGNVIQKIDG 511 Query: 120 TRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDR 179 T T + + + V A G + D + + G + DR Sbjct: 512 TGAVTEHVYDYWGRCLSVRDALGHITSYAYNDRGDRVAVRHPDGGVT-------RYAHDR 564 Query: 180 LESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTE 239 + D S R+ V ++ P +++ D G + + Sbjct: 565 NGDVVRVDHPDGTSTRFDRGGLHKVCAIRR-------PNGEVNRLGYDREGRLVRAENAR 617 Query: 240 GATEWCAEYDEWGNLLNEENPHQLQQLIR--LPGQQYDEESG 279 G + YD G ++ E L++ R + GQ E++G Sbjct: 618 GD-VYLMRYDTAGRMVYERTFAGLEKYYRHDMAGQLLHEKTG 658 Score = 55.2 bits (131), Expect = 5e-06, Method: Composition-based stats. Identities = 33/242 (13%), Positives = 59/242 (24%), Gaps = 34/242 (14%) Query: 9 RDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVES 68 A + +D HG + +K D + YD R + + Sbjct: 491 NGARTRFLHDAHGNVIQKID---------GTGAVTEHVYDYWGRCLSVRDALGH----IT 537 Query: 69 RYLYDPLGRRVAKRVWRRERDLTGWMSLSR-------KPQVTWYGWDGDRLTTIQNDRTR 121 Y Y+ G RVA R T + G Sbjct: 538 SYAYNDRGDRVAVRHPDGGVTRYAHDRNGDVVRVDHPDGTSTRFDRGGLHKVCAIRRPNG 597 Query: 122 IQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLE 181 L+R E A G++ + + + + F + + Sbjct: 598 EVNRLGYDREGRLVRAENARGDVYLMRYDTAGRMVYER--------TFAGLEKYYRHDMA 649 Query: 182 SEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGA 241 ++L ++ Q+ P + DH G +A V+ G Sbjct: 650 GQLLHEKTGAGELT------EFTYDAAGQLVQRTLPDGATESFEYDHCGQLIAAVTPAGE 703 Query: 242 TE 243 Sbjct: 704 LT 705 Score = 46.7 bits (109), Expect = 0.002, Method: Composition-based stats. Identities = 64/470 (13%), Positives = 113/470 (24%), Gaps = 72/470 (15%) Query: 18 DRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYLYDP--- 74 D HG T T T D+ R+V RT D Sbjct: 213 DAHGNTTRLTYREGRIESIT----------DAAGRVVRVRRTPDGRIAAL-----DVKNA 257 Query: 75 --LGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQPGSFT 132 GR VA R + + + + VT Y +D RLT+ + D + ++ Sbjct: 258 PERGRWVALRSYTHDERGDLIADMDAEGCVTRYTYDDHRLTS-RTDPEDLTFHFRYDGRG 316 Query: 133 PLIRV------------------ETATGELAKTQRR----SLADTLQQSGGEDGGSVVFP 170 + A G A+ D + F Sbjct: 317 RCVETWGDHPDPERLGLAKGVPDTLADGTKARGIYHCTLVYGDDGYSEVVDSITVHRYFA 376 Query: 171 PVLVQMLDRLES------EILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLY 224 ++ + + L + V + + V P + + Sbjct: 377 NEFGKLDKAVSGGAVYCRNYDENGNLRSFTDPLGATTTWVRDARGRTLRVSDPLGRTTVI 436 Query: 225 HCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEESGLYY-- 282 + G + G + I + E GL Sbjct: 437 EREPDGHIRRVTDPAGGIT---------EVTRTAGALYWTDPIGATFEVRVEARGLIKET 487 Query: 283 ---NRH--RYYDPLQGRYITQDPIGLKGGW--NFYQYPLNPVQYIDSMGLASKYGHLNNG 335 N R+ G I + I G + Y Y + D++G + Y + + G Sbjct: 488 VAPNGARTRFLHDAHGNVIQK--IDGTGAVTEHVYDYWGRCLSVRDALGHITSYAYNDRG 545 Query: 336 GYGARPNKPPTPDPSKLPDIAKQLRLPYPIDQASSAPNVFKTFFRAL--SPYDYTLYCRK 393 A + +R+ +P D S+ + P Sbjct: 546 DRVAVRHPDGGVTRYAHDRNGDVVRVDHP-DGTSTRFDRGGLHKVCAIRRPNGEVNRLGY 604 Query: 394 WVKPNLTCTPQDDSQYPGMDTKTASDYLPQTNWPTTQLPPGYTCAEPYLF 443 + L M TA + + + + + A L Sbjct: 605 DREGRLVRAENARGDVYLMRYDTAGRMVYERTFAGLEKYYRHDMAGQLLH 654 >UniRef50_B1HKQ3 Rhs family protein n=1 Tax=Burkholderia pseudomallei S13 RepID=B1HKQ3_BURPS Length = 1749 Score = 181 bits (459), Expect = 4e-44, Method: Composition-based stats. Identities = 70/353 (19%), Positives = 112/353 (31%), Gaps = 36/353 (10%) Query: 11 AHYLYRYDRHGRLTEKTDLIP-----------EGVIRTDDERTHRYHYDSQHRLVHYTRT 59 A Y +D RLT T + + Y YD+ L T T Sbjct: 1301 ATANYTFDNANRLTAITQGSETVQLAYDADNHRTTLTLPNGIAVNYGYDNASELTGLTYT 1360 Query: 60 QYAEPL-VESRYLYDPLGRRVAKR----VWRRERDLTGWMSLSRKPQVTWYGWDGDRLTT 114 Q Y YD GR + K T + + T + R Sbjct: 1361 QGNGTALGNLAYAYDADGRIIQKSGIFATDVLPTATTQPATFDLNDRKTSFNGQALRYDA 1420 Query: 115 IQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLV 174 N + Y + L ++ + +L + ++ + ++ Sbjct: 1421 NGNLTSDGTNTYTWDARNQLTQISQGSNVQLSFSYDALGRRIGKTVQGNTTQFLYD---- 1476 Query: 175 QMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLA 234 + + + L G+ + + + D G +A Sbjct: 1477 ------NNNAVQEMQGTTINPILVGLGVDERFARGDVTGR-------TYFLTDSLGSTIA 1523 Query: 235 LVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEESGLYYNRHRYYDPLQGR 294 L + GA YD +GN ++ + G++ D GLYYNR RYY PL Sbjct: 1524 LTDSAGAIRQRYSYDPYGNTEQSDSTTGFTNPYQYTGREMDAA-GLYYNRARYYSPLMSG 1582 Query: 295 YITQDPIGLKGG-WNFYQYP-LNPVQYIDSMGLASKYGHLNNGGYGARPNKPP 345 +I++DPI GG +FY Y +PV + D +GL S N G N Sbjct: 1583 FISEDPITFGGGQLSFYGYSDSDPVNHTDRLGLFSLTRTFANAAGGVFCNYGT 1635 Score = 71.4 bits (173), Expect = 7e-11, Method: Composition-based stats. Identities = 57/391 (14%), Positives = 94/391 (24%), Gaps = 61/391 (15%) Query: 1 MWPDNRIAR-----DAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVH 55 ++ + + + YD R+ TD + RT Y YDS L Sbjct: 833 VYNGGLLQQAISPSGRSLTFNYDSGNRIASVTD---------NSGRTVGYVYDSAGTLAT 883 Query: 56 YTRTQYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTI 115 T +Y YD R + + R +T Y +G Sbjct: 884 VTYPDN----TTEQYTYDTNHRMLTMQDRRGHVWVTN-----------QYDANGRVAKQT 928 Query: 116 QNDRTRIQTIYQPGSFT--PLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVL 173 D T Q Y S V G + ++ G S+ Sbjct: 929 YADNTSYQFAYTTNSNNVVTATTVTDPNGNKEQVAFDPISSYPSSDTYAYGTSLAQTTTY 988 Query: 174 VQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPL 233 V+ L + D + + + G + + + + Sbjct: 989 VREPSGLV-DSQTDALGRTTAYIYDALGNVTSVTRLSGTSNAVTTQLTYTSDYNQLASV- 1046 Query: 234 ALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRL--PGQ---QYDE---ESGLYYNRH 285 G T Y G L + I+ GQ D + L Y Sbjct: 1047 --TDPLGHTI-SLSYT-NGCLTQITDALGHSTTIQCNSAGQPTAMQDALGNTTQLAYQG- 1101 Query: 286 RYYDPLQGRYITQDPIGLKGGWNFYQYPLNPVQYI----DSMGLASKYGHLNNGGYGARP 341 YD IT DP+ Y ++ + D +G + N + Sbjct: 1102 --YDLQS---IT-DPLNRTTS-----YVVDTLGRSIATRDPLGNVRLTQYDTNDWVVSTT 1150 Query: 342 NKPPTPDPSKLPDIAKQLRLPYPIDQASSAP 372 + L + P Sbjct: 1151 DALNQTTTESYDGNGNILTVKLPNSGVIQYT 1181 Score = 69.8 bits (169), Expect = 2e-10, Method: Composition-based stats. Identities = 38/245 (15%), Positives = 74/245 (30%), Gaps = 53/245 (21%) Query: 4 DNRIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAE 63 ++R RYD +G LT + T+ Y +D++++L ++ Sbjct: 1405 NDRKTSFNGQALRYDANGNLTS--------------DGTNTYTWDARNQLTQISQ----G 1446 Query: 64 PLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQ 123 V+ + YD LGRR+ K V + T + +D + T Sbjct: 1447 SNVQLSFSYDALGRRIGKTV---------------QGNTTQFLYDNNNAVQEMQGTTINP 1491 Query: 124 TIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESE 183 + G R + SL T+ + + ++ +S Sbjct: 1492 ILVGLGVDERFARGDVTG--RTYFLTDSLGSTIALTDSAGAIRQRYSYDPYGNTEQSDST 1549 Query: 184 ILADRVSEESRRWLASCGLTVEQMQN---------QMDPVYTPARKIHLY---------H 225 + + R + + GL + + DP+ ++ Y H Sbjct: 1550 TGFTNPYQYTGREMDAAGLYYNRARYYSPLMSGFISEDPITFGGGQLSFYGYSDSDPVNH 1609 Query: 226 CDHRG 230 D G Sbjct: 1610 TDRLG 1614 Score = 61.7 bits (148), Expect = 6e-08, Method: Composition-based stats. Identities = 42/292 (14%), Positives = 74/292 (25%), Gaps = 48/292 (16%) Query: 18 DRHGRLTEKTDLIPE-GVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRY------ 70 D G T+ + I RT Y D+ R + ++Y Sbjct: 1089 DALGNTTQLAYQGYDLQSITDPLNRTTSYVVDTLGR--SIATRDPLGNVRLTQYDTNDWV 1146 Query: 71 -------------LYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVT-------WYGWDGD 110 YD G + ++ + S +R T + +DG Sbjct: 1147 VSTTDALNQTTTESYDGNGNILTVKLPNSGVIQYTYDSRNRLITRTDAMNQSESWTYDGM 1206 Query: 111 RLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFP 170 DR T + V A G + + + L G++ + Sbjct: 1207 GHVLTHTDRKGQVTNISYDALNRRSLVSYADGSGIQASYDA-GNRLTSVIDSTSGTLSWD 1265 Query: 171 PVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRG 230 + + + S + A+ T Q YT L Sbjct: 1266 YDGLDHVTSTST-----PQGNVSSTYDAAGRRTSMTAAAQATANYTFDNANRL------- 1313 Query: 231 LPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEESGLYY 282 A+ +G+ YD + P+ + E +GL Y Sbjct: 1314 --TAIT--QGSETVQLAYDADNHRTTLTLPNGIAVNYGYDNAS--ELTGLTY 1359 Score = 57.5 bits (137), Expect = 1e-06, Method: Composition-based stats. Identities = 44/380 (11%), Positives = 87/380 (22%), Gaps = 37/380 (9%) Query: 64 PLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQ 123 + YD G R+A + Y +D Sbjct: 846 SGRSLTFNYDS-GNRIASVTDNS-------------GRTVGYVYDSAGTLATVTYPDNTT 891 Query: 124 TIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESE 183 Y + ++ ++ G + T + + + D S F + Sbjct: 892 EQYTYDTNHRMLTMQDRRGHVWVTNQYDANGRVAKQTYADNTSYQFAYTTNSNNVVTATT 951 Query: 184 ILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATE 243 + ++E + + T + Y + GL + G T Sbjct: 952 VTDPNGNKEQVAFDPISSYP----SSDTYAYGTSLAQTTTYVREPSGLVDSQTDALGRTT 1007 Query: 244 WCAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEESGLYYNRHRYYDPLQGRYITQDPIGL 303 YD GN+ + + + L Y Y+ L DP+G Sbjct: 1008 A-YIYDALGNVTSVTRLSGTSNAV---------TTQLTYTS--DYNQLASV---TDPLGH 1052 Query: 304 KGGWNFYQYPLNPVQYI-DSMGLASKYGHLNNGGYGARPNKPPTPDPSKLPDIAKQLRLP 362 Y + I D++G ++ + G A + Q Sbjct: 1053 TISL---SYTNGCLTQITDALGHSTTIQCNSAGQPTAMQDALGNTTQLAYQGYDLQSITD 1109 Query: 363 YPIDQASSAPNVFKTFFRALSPYDYTLYCRKWVKPNLTCTPQDDSQYPGMDTKTASDYLP 422 S + P + + T +Q + L Sbjct: 1110 PLNRTTSYVVDTLGRSIATRDPLGNVRLTQYDTNDWVVSTTDALNQTTTESYDGNGNILT 1169 Query: 423 QTNWPTTQLPPGYTCAEPYL 442 + + Y + Sbjct: 1170 VKLPNSGVIQYTYDSRNRLI 1189 Score = 54.4 bits (129), Expect = 9e-06, Method: Composition-based stats. Identities = 33/252 (13%), Positives = 56/252 (22%), Gaps = 40/252 (15%) Query: 10 DAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHY-----------DSQHRLVHYTR 58 Y YD G +T T L T + T + Y D + + Sbjct: 1004 GRTTAYIYDALGNVTSVTRLSG-----TSNAVTTQLTYTSDYNQLASVTDPLGHTISLSY 1058 Query: 59 TQYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQND 118 T + D LG + T + G L +I + Sbjct: 1059 TNGCLTQIT-----DALG---HSTTIQCNSAGQPTAMQDALGNTTQLAYQGYDLQSITDP 1110 Query: 119 RTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLD 178 T Y + I G + TQ + + + + + + Sbjct: 1111 -LNRTTSYVVDTLGRSIATRDPLGNVRLTQYDTNDWVVSTTDALNQTTTE-----SYDGN 1164 Query: 179 RLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVST 238 + + + L +T D G L Sbjct: 1165 GNILTVKLPNSGVIQYTYDSRNRLITRTDAMNQSESWT---------YDGMGHVLTHTDR 1215 Query: 239 EGATEWCAEYDE 250 +G YD Sbjct: 1216 KGQVTN-ISYDA 1226 Score = 52.5 bits (124), Expect = 3e-05, Method: Composition-based stats. Identities = 21/154 (13%), Positives = 47/154 (30%), Gaps = 22/154 (14%) Query: 3 PDNRIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYA 62 + + D Y +D +LT+ + + YD+ R + T Sbjct: 1420 ANGNLTSDGTNTYTWDARNQLTQIS---------QGSNVQLSFSYDALGRRIGKTVQGN- 1469 Query: 63 EPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRK------PQVTWYGWDGDRLT-TI 115 +++LYD V + + + + + T++ D T + Sbjct: 1470 ----TTQFLYDNN-NAVQEMQGTTINPILVGLGVDERFARGDVTGRTYFLTDSLGSTIAL 1524 Query: 116 QNDRTRIQTIYQPGSFTPLIRVETATGELAKTQR 149 + I+ Y + + ++ TG Q Sbjct: 1525 TDSAGAIRQRYSYDPYGNTEQSDSTTGFTNPYQY 1558 >UniRef50_UPI0001AF662D insecticidal toxin complex protein n=1 Tax=Mycobacterium kansasii ATCC 12478 RepID=UPI0001AF662D Length = 2505 Score = 181 bits (459), Expect = 5e-44, Method: Composition-based stats. Identities = 72/406 (17%), Positives = 121/406 (29%), Gaps = 63/406 (15%) Query: 2 WPDNRIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERT--HRYHYDSQHRLVHYTRT 59 WP ++ + + +D G + DL + + + T Y YD+ +RL+ T Sbjct: 1877 WPGCQL---QNQRFVHDPSGNVAAVRDLAQQAIFFRNRRVTADSDYTYDAFYRLIEATGR 1933 Query: 60 QYAEPLVE--------------------------SRYLYDPLGRRVAKRVWRRERDLTGW 93 ++ RY YD +G A + GW Sbjct: 1934 EHIGQAAPSPTTYNDVARLRIPHPADGNAMARYLERYTYDDVGNLQAVAHVGTDPANPGW 1993 Query: 94 MSLSRKPQVTWYGW--DGDRLTTIQNDRTRIQTIYQ---------------PGSFTPLIR 136 + + +RLT+ D Y L Sbjct: 1994 TRTYAYAETSLLEPAQHNNRLTSTTVDGVTDVYEYDEHGDTLKMPQLQAMQWDFGDRLRM 2053 Query: 137 VETAT------------GELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEI 184 GE + + L++ G+VV + + ++ L Sbjct: 2054 TRRQAVNAGDADGTAHAGERTYYVYGAGGERLRKITETAAGAVVQDRIQLGGVEILRRAG 2113 Query: 185 LADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEW 244 + E S L + + P P + D G + + Sbjct: 2114 PSPLTQEILHIPDGSATLAIVETTLSGGPPGAPKHLVRHQVRDQLGSAAVELDDQARIIS 2173 Query: 245 CAEYDEWGNLLNEENPHQLQQL--IRLPGQQYDEESGLYYNRHRYYDPLQGRYITQDPIG 302 EY +G + Q + R G + DEESGL + RYY P GR+++ DP+G Sbjct: 2174 FEEYTPYGATTYQAVRRQTETPKRFRFLGAERDEESGLQHLGARYYAPWLGRFVSCDPMG 2233 Query: 303 LKGGWNFYQYP-LNPVQYIDSMGLASKYGHLNNGGYGARPNKPPTP 347 ++GG Y Y NPV D G+ + + P Sbjct: 2234 IEGGTCLYAYSRGNPVSRKDPGGMGDEPTAAGGITITSGGGVSAGP 2279 Score = 42.9 bits (99), Expect = 0.028, Method: Composition-based stats. Identities = 35/239 (14%), Positives = 60/239 (25%), Gaps = 45/239 (18%) Query: 16 RYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQ-HRLVHYTRTQYAEP---------- 64 RYD GR + + YD RL + Sbjct: 1825 RYDAQGRRIQV---------DRGNGVRTTARYDPLTQRLAELQSRRNPAAFADCPDPPPA 1875 Query: 65 ------LVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDG-DRLTTIQN 117 L R+++DP G A R ++ ++ Y +D RL Sbjct: 1876 GWPGCQLQNQRFVHDPSGNVAAVRDLAQQAIFFRNRRVTADSD---YTYDAFYRLIEATG 1932 Query: 118 DRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQML 177 Q P ++ + R+ R L + V L Sbjct: 1933 REHIGQAAPSPTTYNDVARLRIPHPADGNAMARYLER--------------YTYDDVGNL 1978 Query: 178 DRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIH-LYHCDHRGLPLAL 235 + +R + + +E Q+ T + +Y D G L + Sbjct: 1979 QAVAHVGTDPANPGWTRTYAYAETSLLEPAQHNNRLTSTTVDGVTDVYEYDEHGDTLKM 2037 >UniRef50_D0Z598 Rhs family protein n=1 Tax=Photobacterium damselae subsp. damselae CIP 102761 RepID=D0Z598_LISDA Length = 2301 Score = 181 bits (459), Expect = 5e-44, Method: Composition-based stats. Identities = 61/362 (16%), Positives = 103/362 (28%), Gaps = 40/362 (11%) Query: 8 ARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYT---------R 58 Y YD G +T++ D R+ YD R+ T Sbjct: 1717 NGYRQIYYNYDNWGNVTQRYDRSL--------GLNERFTYDLLDRVTSATPMLDDQNQHG 1768 Query: 59 TQYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQND 118 + Y YD LG K + + T Y +D Sbjct: 1769 AGNPDFNRRFEYHYDRLGNITYKTGIGHYEYRSSHKHAVTQAGDTHYDYDAAGNMVRATK 1828 Query: 119 RTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLD 178 + + + SF R+ G + + + + + Q+LD Sbjct: 1829 QDKEERSIVWTSFNKPERITR-NGHITSFEYDANHARFYREDSNGKQILYLGKTYEQILD 1887 Query: 179 RLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYT-PARKIHLYHCDHRGLPLALVS 237 + E ++++ + G + ++ D ++I H D + Sbjct: 1888 TKTKHV-------EYKQYIYADGKLIALHVSEYDNQRNLKDKQIRYLHYDALSSVDLITD 1940 Query: 238 TEGATEWCAEYDEWGNLL---------NEENPHQLQQLIRLPGQQYDEESGLYYNRHRYY 288 G +D WG G ++ EE GL + R Y Sbjct: 1941 GYGNIVERRSFDSWGKARKLLWQDPHDPATLVQLNLTTRGFTGHEHLEEVGLIHMNGRVY 2000 Query: 289 DPLQGRYITQDPIGLKG----GWNFYQYP-LNPVQYIDSMGLASKYGHLNNGGYGARPNK 343 D GR+I+ DP+ +N Y Y NP++Y D G + N G N Sbjct: 2001 DADIGRFISPDPVVQAPFMTNSFNRYSYVMNNPLKYTDPSGYYTATETDNITGQTTEVNL 2060 Query: 344 PP 345 Sbjct: 2061 GR 2062 Score = 51.0 bits (120), Expect = 1e-04, Method: Composition-based stats. Identities = 21/141 (14%), Positives = 37/141 (26%), Gaps = 16/141 (11%) Query: 16 RYDRHGRLTEKTDLIPEGVIRTDDERT--HRYHYDSQHRLVHYTRTQYAEPLVESRYLYD 73 YD GRL + + + ++ ++ YD ++ T R YD Sbjct: 958 SYDTRGRLLAQRTQSSDYGTTSMGAKSLIQQFEYDDYGNVISETTGGTNTASRTDRTTYD 1017 Query: 74 PLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGD-RLTTIQNDRTRIQTIYQPGSFT 132 G + + + T Y +D L T+ D T + Sbjct: 1018 SYG-------------IFPVSTSNALGHTTTYEYDQLFGLVTMVTDPNNRVTRNAYDVYG 1064 Query: 133 PLIRVETATGELAKTQRRSLA 153 L + L Sbjct: 1065 RLQQTWLPGSNNWVKYSYRLG 1085 Score = 46.7 bits (109), Expect = 0.002, Method: Composition-based stats. Identities = 32/276 (11%), Positives = 67/276 (24%), Gaps = 30/276 (10%) Query: 10 DAHYLYR---YDRHGRLTEKTDLI-PEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPL 65 D ++Y +D G+ + + + ++ YDS R V+ + Sbjct: 1128 DGRWVYEDQSWDSLGQKLRHSRPSFEKPDPSMSNVPHSQFRYDSLGREVYSKVPSDSGNG 1187 Query: 66 VESR----------YLYDPLGRRVAKRVW-RRERDLTGWMSLSRKPQVTWYGWDGDRLTT 114 Y +G K + + Q Y DG Sbjct: 1188 WHESQIVYQGLKETYTESKVGGIYTKTITKNLLGQIIKVDEPLGASQTYTYYPDGK--LK 1245 Query: 115 IQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLV 174 D T Q + + + + + D + + L Sbjct: 1246 TTTDSANNTTTVQYDNLGYRKLLIDPDLGTLHYDHNVFGELVYKRDANDKTTRITYDQL- 1304 Query: 175 QMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLA 234 + +S W + Q +P L++ + + Sbjct: 1305 -------GRKTYENISGIVSTWEYDRRGKGLLYRQQ-----SPGNTKELFYNNGLLVEEK 1352 Query: 235 LVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRLP 270 +V+ +YD + + E P+ L Sbjct: 1353 MVAKGQTLIQRYKYDSFERIAEEIRPNDLVLQYIYN 1388 Score = 44.0 bits (102), Expect = 0.011, Method: Composition-based stats. Identities = 39/320 (12%), Positives = 77/320 (24%), Gaps = 70/320 (21%) Query: 14 LYRYDRHGRLTEKTDLIPEGVIRTDD-----------------ERTHRYHYDSQHRLVHY 56 + YD +G + +T RTD T Y YD +L Sbjct: 988 QFEYDDYGNVISETTGGTNTASRTDRTTYDSYGIFPVSTSNALGHTTTYEYD---QLFGL 1044 Query: 57 TRTQYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQ--------------- 101 +R YD GR + + L + Sbjct: 1045 VTMVTDPNNRVTRNAYDVYGRLQQTWLPGSNNWVKYSYRLGNNCEAKANQAISCILTEKN 1104 Query: 102 -----VTWYGWDGDRLTTIQNDRTRIQTIYQPGSFTPLIRVET-------------ATGE 143 +T + G R N + +Y+ S+ L + + Sbjct: 1105 GRGKTITQFDRLG-REVRNINQSFDGRWVYEDQSWDSLGQKLRHSRPSFEKPDPSMSNVP 1163 Query: 144 LAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSEESR--------- 194 ++ + SL + D G+ +V + Sbjct: 1164 HSQFRYDSLGREVYSKVPSDSGNGWHESQIVYQGLKETYTESKVGGIYTKTITKNLLGQI 1223 Query: 195 ----RWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTE-GATEWCAEYD 249 L + ++ A D+ G L+ + G +++ Sbjct: 1224 IKVDEPLGASQTYTYYPDGKLKTTTDSANNTTTVQYDNLGYRKLLIDPDLGTL--HYDHN 1281 Query: 250 EWGNLLNEENPHQLQQLIRL 269 +G L+ + + + I Sbjct: 1282 VFGELVYKRDANDKTTRITY 1301 Score = 43.3 bits (100), Expect = 0.019, Method: Composition-based stats. Identities = 35/249 (14%), Positives = 58/249 (23%), Gaps = 29/249 (11%) Query: 7 IARDAHYLYRYDRHGRLTEKTDLIPEGVI-----------RTDDERTHRYHYDSQHRLVH 55 + + Y YD G + T E T + + YD+ H Sbjct: 1807 VTQAGDTHYDYDAAGNMVRATKQDKEERSIVWTSFNKPERITRNGHITSFEYDANH---- 1862 Query: 56 YTRTQYAEPLVESRY---LYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRL 112 + + Y Y+ + K + V+ Y Sbjct: 1863 ARFYREDSNGKQILYLGKTYEQI--LDTKTKHVEYKQYIYADGKLIALHVSEYD-----N 1915 Query: 113 TTIQNDRTRIQTIYQPGSFTPLIRVETAT-GELAKTQRRSLADTLQQSGGEDGGSVVFPP 171 D+ Y S LI E A L D ++V Sbjct: 1916 QRNLKDKQIRYLHYDALSSVDLITDGYGNIVERRSFDSWGKARKLLWQDPHDPATLVQLN 1975 Query: 172 VLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGL 231 + + E + R + A G + P T + + Y + Sbjct: 1976 LTTRGFTGHEHLEEVGLIHMNGRVYDADIGRFISPDPVVQAPFMTNSFNRYSYVMN---N 2032 Query: 232 PLALVSTEG 240 PL G Sbjct: 2033 PLKYTDPSG 2041 Score = 41.7 bits (96), Expect = 0.061, Method: Composition-based stats. Identities = 25/186 (13%), Positives = 44/186 (23%), Gaps = 21/186 (11%) Query: 10 DAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHR----------YHYDSQHRLVHYTRT 59 A Y Y G+L TD D +R HYD H + Sbjct: 1231 GASQTYTYYPDGKLKTTTDSANNTTTVQYDNLGYRKLLIDPDLGTLHYD--HNVFGELVY 1288 Query: 60 QYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGW-------MSLSRKPQVTWYGWDGDRL 112 + +R YD LGR+ + + ++ L Sbjct: 1289 KRDANDKTTRITYDQLGRKTYENISGIVSTWEYDRRGKGLLYRQQSPGNTKELFYNNGLL 1348 Query: 113 TTIQ--NDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFP 170 + + Y+ SF + + + + +F Sbjct: 1349 VEEKMVAKGQTLIQRYKYDSFERIAEEIRPNDLVLQYIYNEFGYHSAVRSPKSAADSIFT 1408 Query: 171 PVLVQM 176 + Q Sbjct: 1409 SLSFQQ 1414 >UniRef50_A9C2K3 YD repeat protein n=1 Tax=Delftia acidovorans SPH-1 RepID=A9C2K3_DELAS Length = 1301 Score = 181 bits (459), Expect = 5e-44, Method: Composition-based stats. Identities = 73/379 (19%), Positives = 120/379 (31%), Gaps = 59/379 (15%) Query: 5 NRIARDAHYLYRYDRHGRL--TEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYA 62 ++A +D GR+ ++ ++P + + + YD+ RL + + Sbjct: 793 GQLASSQLLNLTWDAAGRISLIQQRHMLPGTAAAQQAKLSSAFSYDAVGRLTASAHSAPS 852 Query: 63 E-------------PLVESRYLYDPLGRRVAKRVWRR--ERDLTGWMSLSRKPQVTWYGW 107 L S Y +D G R T + Sbjct: 853 GLTLPTGWSLADTIELSASGYAWDANGNRTQVHYSNALASGTSTLQRNYQTAAGTNRLQS 912 Query: 108 DGDRLTTIQNDRTRIQTIYQPGSFTPLIR--------------------VETATGELAKT 147 L + + + L++ + A Sbjct: 913 YAQTLQRPGSAAQNSNVTFSYDAAGALVKKGDNHLHYGADGRIAKAGEYADAADARAVSY 972 Query: 148 QRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSEESRRWLASCG------ 201 +L + +S G + D + S +L ++ S A G Sbjct: 973 VYNALGQRVLKSDARGAGQPATL-QTLYAEDGIGSTVLGQYANQRSANSAAPAGQSDSTE 1031 Query: 202 -LTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENP 260 + + M +++ H DH P L + +G W +G + Sbjct: 1032 IIYLPTASGPMPIAAEINGRLYAIHTDHLNTPRRLTNQQGQVAWQWLISGFGEVRPTTGD 1091 Query: 261 HQLQQ-------------LIRLPGQQYDEESGLYYNRHRYYDPLQGRYITQDPIGLKGGW 307 Q +R PGQ +DEE+GL YN HRYYD GRYI DPIGL GGW Sbjct: 1092 RGYGQTVSGPSYAQAVKFDLRYPGQVFDEETGLSYNLHRYYDAATGRYIQADPIGLAGGW 1151 Query: 308 NFYQYPL-NPVQYIDSMGL 325 N + Y NP+ ++D +GL Sbjct: 1152 NRFGYVGENPLSFVDPLGL 1170 Score = 54.4 bits (129), Expect = 1e-05, Method: Composition-based stats. Identities = 35/266 (13%), Positives = 63/266 (23%), Gaps = 29/266 (10%) Query: 10 DAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESR 69 L+ YD G + T+ + H++ +D R++ A +E Sbjct: 368 AGQTLFGYDTRGNRNKVTNAL---------GHVHQFAHDGAGRILTA----MAPSGLERS 414 Query: 70 YLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVT------WYGWDGDRLTTIQNDRTRIQ 123 Y Y+P G+ V ++ LT + Y +D R +D Sbjct: 415 YSYNPRGQLTRVSVGGQQTTLTYLPNDRLGTITFANGHAITYQYDDARRINRWSDNRGNS 474 Query: 124 TIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESE 183 Y + + + + Sbjct: 475 GQYVLDQWDNRTSELIKDSAAQTAL---QMQRSINGINRISSETIRGNQSTALTYDANGD 531 Query: 184 ILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATE 243 + L GL ++ DP+ A + + A +G Sbjct: 532 LATASNGLGQTTTLDVDGLR--RLTKITDPLNASATLSY----NALDAVTAAQDFKG-VT 584 Query: 244 WCAEYDEWGNLLNEENPHQLQQLIRL 269 D GN E P Sbjct: 585 TTYTRDALGNAKAETTPDAGNSTTTY 610 Score = 46.7 bits (109), Expect = 0.002, Method: Composition-based stats. Identities = 38/242 (15%), Positives = 69/242 (28%), Gaps = 20/242 (8%) Query: 27 TDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESR-YLYDPLGRRVAKRVWR 85 D + + T+ RT + Y RLV T A S + Y+ G Sbjct: 309 HDTLALPTLITETGRTTKLSYGGGGRLVGAALTDNASNTTYSSAWSYNAQG-LPETYTDA 367 Query: 86 RERDLTGWMSLSRKPQVT-------WYGWDGDRLTTIQNDRTRIQTIYQPGSFTPLIRVE 138 + L G+ + + +VT + DG + ++ Y L RV Sbjct: 368 AGQTLFGYDTRGNRNKVTNALGHVHQFAHDGAGRILTAMAPSGLERSYSYNPRGQLTRVS 427 Query: 139 TATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSEESRRWLA 198 G T D L +G ++ + + ++R S+ + +W Sbjct: 428 V--GGQQTTLTYLPNDRLGTITFANGHAITYQYDDARRINRW-SDNRGNSGQYVLDQWDN 484 Query: 199 SCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEE 258 ++ Q + + + G YD G+L Sbjct: 485 RTSELIKDSAAQTALQMQRSI-------NGINRISSET-IRGNQSTALTYDANGDLATAS 536 Query: 259 NP 260 N Sbjct: 537 NG 538 Score = 44.8 bits (104), Expect = 0.008, Method: Composition-based stats. Identities = 27/191 (14%), Positives = 47/191 (24%), Gaps = 31/191 (16%) Query: 2 WPDNRIARDAHYLYRYDRHGRLTE--KTDLIPEGVIRTD---------------DERTHR 44 W DNR Y D+ T D + ++ ++ Sbjct: 467 WSDNRGNSGQ---YVLDQWDNRTSELIKDSAAQTALQMQRSINGINRISSETIRGNQSTA 523 Query: 45 YHYDSQHRLVHYTRTQYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSR------ 98 YD+ L + ++ D L R + +L Sbjct: 524 LTYDANGDLATASNGLGQTTTLDV----DGLRRLTKITDPLNASATLSYNALDAVTAAQD 579 Query: 99 -KPQVTWYGWDGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQ 157 K T Y D + + + + + A G QR +L +Q Sbjct: 580 FKGVTTTYTRDALGNAKAETTPDAGNSTTTYDALGLIATAKDAAGRTLAVQRDALGRPIQ 639 Query: 158 QSGGEDGGSVV 168 G S + Sbjct: 640 LQYGSTATSTL 650 Score = 42.1 bits (97), Expect = 0.050, Method: Composition-based stats. Identities = 37/278 (13%), Positives = 61/278 (21%), Gaps = 31/278 (11%) Query: 7 IARDAHYLYRYDRHGRLTEKTDLIPEGVIR----------------TDDERTHRYHYDSQ 50 + Y YD G L+ + + + + Y+S Sbjct: 117 LPDGNTVSYDYDAKGNLSSVKVNGFQTRTYSYESSVSPGLLTAIGDSQGNQVLGFVYNSD 176 Query: 51 HRLVHYTRTQYAEPLVESRYLYDP----LGRRVAKRVWRRERD----LTGWMSLSRKPQV 102 L H T + Y G VA T + + Sbjct: 177 GSLKH-TSRAGVSGVYSVSYSGAASVGTAGMLVAPGADDPNWYKASVTTTAPDGNGATRH 235 Query: 103 TWYGWDGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGE 162 G RL + + + +E G Q + + + Sbjct: 236 YQGSAAGVRLVGQSKATFWAKFKEELNADLLPAYIEDFKGNRTSYQWNANRQLITKVVAA 295 Query: 163 DGGSVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIH 222 + + D L L ++ G V T + Sbjct: 296 FNRTEAQSTQIDWH-DTLALPTLITETGRTTKLSYGGGGRLVGAALTDNASNTTYSSAWS 354 Query: 223 LYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENP 260 + +GLP G T YD GN N Sbjct: 355 Y---NAQGLPETYTDAAGQTL--FGYDTRGNRNKVTNA 387 >UniRef50_Q2SGE8 Rhs family protein n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SGE8_HAHCH Length = 1452 Score = 181 bits (458), Expect = 7e-44, Method: Composition-based stats. Identities = 85/389 (21%), Positives = 125/389 (32%), Gaps = 38/389 (9%) Query: 15 YRYDRHGRLTEKTDLIPEGVIRTDDERTHRYH--------YDSQHRLVHYTRTQYAEPLV 66 + +D G L +R D + Y +L+ R Sbjct: 958 FEHDELGNLVSARYGDGVMDLRMPDAIGALFQSYNRKDREYGPAGQLLSMRRPNGL---- 1013 Query: 67 ESRYLYDPLGRRVAKRVWRRERDLTGWM---------SLSRKPQVTWYGWDGDRLTTIQN 117 R+ YD G + K + W + Y G RL+ N Sbjct: 1014 -VRFEYDAEGNLITKSEPGGKIWRYEWNVSGTLKKVIRPDGRIVTFEYDALGRRLSKAFN 1072 Query: 118 DRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQML 177 R + PL L+ ++ + P+ Q Sbjct: 1073 GRIT---RWVWDGNNPLHEWVEMQDAQEARAAFDLSSAPAETVSGRPA-IARSPIQPQAP 1128 Query: 178 DRLESEILADRVSEESR--RWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLAL 235 + ES+ WL + D ++ D+ G P A+ Sbjct: 1129 PATSPQAHPAGAGGESKLITWLFEPESFTPMAKQVGDAYFS-------ILADYLGTPNAM 1181 Query: 236 VSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEESGLYYNRHRYYDPLQGRY 295 +EG W A WG L N + R PGQ DEE+GLYYNR RYYDP G+Y Sbjct: 1182 YDSEGRQVWSANISVWGELRNLKGNRG-ACPFRWPGQYEDEETGLYYNRFRYYDPDSGQY 1240 Query: 296 ITQDPIGLKGGWNFYQYPLNPVQYIDSMGLASKYGHLNNGGYGARPNKPPTPDPSKLPDI 355 I QDPI +KGG N Y+Y + +ID++GL G + G G R T K+ ++ Sbjct: 1241 IRQDPIRIKGGLNLYKYVSDVTTWIDTLGLQG--GSASYGRSGRRIGHADTDGLEKIGEL 1298 Query: 356 AKQLRLPYPIDQASSAPNVFKTFFRALSP 384 + + F S Sbjct: 1299 NAVKAGGDDRLPSILYEGDRTSLFHYTSE 1327 Score = 76.4 bits (186), Expect = 2e-12, Method: Composition-based stats. Identities = 32/283 (11%), Positives = 75/283 (26%), Gaps = 32/283 (11%) Query: 12 HYLYRYDRHGRLTEKTDLIPEGVI------------RTDDERTHRYHYDSQHRLVHYTRT 59 Y YD G LT+ T + + + + YD RL Sbjct: 535 STRYEYDPRGNLTQITQPDGSVLQMEYDERDNVVKAQDANGGAWLWEYDEHCRLTA---- 590 Query: 60 QYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYG-------WDGDRL 112 + +RY Y+ + + + + +D Sbjct: 591 KVDPLDRRTRYSYEGAM-LTSVAGPAGQETHIEYDGYNNPIGFATPDGGLPEWRYDNHGR 649 Query: 113 TTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPV 172 T+ D +Q Q + +V G L + ++ + + + + Sbjct: 650 ITLAIDAQGVQRRLQYDLLGRVTQVNEPDGNLRTFSYDPEGNLVRATDAQFDVHFTYQGM 709 Query: 173 LVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTP------ARKIHLYHC 226 ++ R ++ + + A + + ++ P + Y Sbjct: 710 G-RIASRTQAGTTIQFEYDTEEQLTAITNEHGDVYRFELGPTGETLSESGFDGLLRRYER 768 Query: 227 DHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRL 269 + G L+ G YD G ++ + ++ + Sbjct: 769 NAAGQVRRLLKPGGRHTD-YAYDTLGRVMRILHSDGEEERFQY 810 Score = 64.1 bits (154), Expect = 1e-08, Method: Composition-based stats. Identities = 44/277 (15%), Positives = 79/277 (28%), Gaps = 41/277 (14%) Query: 6 RIARDAHYLYRYDRHGRLTEKTDLIPE-----------GVIRTDDERTHRYHYDSQHRLV 54 + A +L+ YD H RLT K D + + + YD + + Sbjct: 571 QDANGGAWLWEYDEHCRLTAKVDPLDRRTRYSYEGAMLTSVAGPAGQETHIEYDGYNNPI 630 Query: 55 HYTRTQYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTT 114 + P + YD GR + + + L R QV DG+ T Sbjct: 631 GFATPDGGLP----EWRYDNHGRITLAIDAQGVQRRLQYDLLGRVTQVNE--PDGNLRT- 683 Query: 115 IQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLV 174 + L+R A ++ T S + G ++ F Sbjct: 684 -----------FSYDPEGNLVRATDAQFDVHFT---YQGMGRIASRTQAGTTIQFEYDTE 729 Query: 175 QM--------LDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHC 226 + D E+ + + Q+ + P + Y Sbjct: 730 EQLTAITNEHGDVYRFELGPTGETLSESGFDGLLRRYERNAAGQVRRLLKPGGRHTDYAY 789 Query: 227 DHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQL 263 D G + ++ ++G E +Y G L+ N Sbjct: 790 DTLGRVMRILHSDGE-EERFQYRPDGELMMAVNSSAT 825 Score = 54.8 bits (130), Expect = 7e-06, Method: Composition-based stats. Identities = 31/273 (11%), Positives = 68/273 (24%), Gaps = 23/273 (8%) Query: 12 HYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYL 71 ++ ++YD + H+ YD + L + ++ Y Sbjct: 448 NFYFKYDGVD-----HNARCIHTWGDGGIYNHQLVYDDEKSLTIVQNSLG----YQTVYH 498 Query: 72 YDPL--GRRVAKRVWRRERDLTGWMSLSRKPQ----VTWYGWDGDRLTTIQNDRTRIQTI 125 +D R + + ++ + T Y +D T Sbjct: 499 HDGALPHRIENASGGVVVNEYNRFYQVTCETNELGLSTRYEYDPRGNLTQITQPDGSVLQ 558 Query: 126 YQPGSFTPLIRVETATGELAKTQRRSLADTLQQSG-GEDGGSVVFPPVLVQML---DRLE 181 + +++ + A G + + + + ++ + E Sbjct: 559 MEYDERDNVVKAQDANGGAWLWEYDEHCRLTAKVDPLDRRTRYSYEGAMLTSVAGPAGQE 618 Query: 182 SEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARK--IHLYHCDHRGLPLALVSTE 239 + I D + GL + N + D G + + Sbjct: 619 THIEYDGYNNPIGFATPDGGLPEWRYDNHGRITLAIDAQGVQRRLQYDLLGRVTQVNEPD 678 Query: 240 GATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQ 272 G YD GNL+ + Q G Sbjct: 679 GNLR-TFSYDPEGNLVRATDA-QFDVHFTYQGM 709 Score = 47.1 bits (110), Expect = 0.002, Method: Composition-based stats. Identities = 43/287 (14%), Positives = 81/287 (28%), Gaps = 40/287 (13%) Query: 16 RYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYLYDPL 75 +D R E+ + R Y YD+ R++ + E R+ Y P Sbjct: 758 GFDGLLRRYERNAAGQVRRLLKPGGRHTDYAYDTLGRVMRILHSDG----EEERFQYRPD 813 Query: 76 GRRVAKRVWRRERDLTGWMSLSRKPQVT-----WYGWDGDRLTTIQNDRTRIQTIYQPGS 130 G + ++ +D L + Q Sbjct: 814 GELMMAVNSSATLSFERNALGQVTKEICGDLWVSSEYDALGLRSRMRSSLGAGQQIQRNV 873 Query: 131 FTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVS 190 ++ V T + + +R + G + ++ E+L V Sbjct: 874 AGDVMGVTTGDAQFSAQFKRDELGRELERSLPGGVRSRWRRD--RLGRPSLHEVLKADVP 931 Query: 191 EESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPL-----------ALVSTE 239 E +R + +E++ + ++ V + D G + + Sbjct: 932 ESARTYFWGVNGRLEKIHDSLNGVSV-------FEHDELGNLVSARYGDGVMDLRMPDAI 984 Query: 240 GATEWCA-----EYDEWGNLLNEENPHQLQQLIRLPGQQYDEESGLY 281 GA EY G LL+ P+ L +R +YD E L Sbjct: 985 GALFQSYNRKDREYGPAGQLLSMRRPNGL---VRF---EYDAEGNLI 1025 Score = 46.7 bits (109), Expect = 0.002, Method: Composition-based stats. Identities = 42/300 (14%), Positives = 74/300 (24%), Gaps = 57/300 (19%) Query: 3 PDNRIARDAHYLYRYDRHGRLTEKTDLIPEGVIRT-----------DDERTHRYHYDSQH 51 P R H Y YD GR+ E + T + ++ Sbjct: 780 PGGR-----HTDYAYDTLGRVMRILHSDGEEERFQYRPDGELMMAVNSSATLSFERNALG 834 Query: 52 RLVHYTRTQYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWD--- 108 ++ + L S YD LG R R VT Sbjct: 835 QVTK----EICGDLWVSS-EYDALGLRSRMRSSLGAGQQIQRNVAGDVMGVTTGDAQFSA 889 Query: 109 -------GDRLTTIQNDRTRIQTI-----------------------YQPGSFTPLIRVE 138 G L R + Y G L ++ Sbjct: 890 QFKRDELGRELERSLPGGVRSRWRRDRLGRPSLHEVLKADVPESARTYFWGVNGRLEKIH 949 Query: 139 TATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSEESRRWLA 198 + ++ + L + + G+ + P + + + + + Sbjct: 950 DSLNGVSVFEHDELGNLVSARYGDGVMDLRMPDAIGALFQSYNRKDREYGPAGQLLSMRR 1009 Query: 199 SCGLTVEQMQNQMD--PVYTPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLN 256 GL + + + P KI Y + G ++ +G EYD G L+ Sbjct: 1010 PNGLVRFEYDAEGNLITKSEPGGKIWRYEWNVSGTLKKVIRPDGRIV-TFEYDALGRRLS 1068 >UniRef50_B2HAQ4 RhsD protein n=4 Tax=Burkholderia RepID=B2HAQ4_BURPS Length = 1531 Score = 180 bits (457), Expect = 7e-44, Method: Composition-based stats. Identities = 90/374 (24%), Positives = 123/374 (32%), Gaps = 78/374 (20%) Query: 4 DNRIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQH----------RL 53 R +R Y+YD GRLT D + + YDS RL Sbjct: 1050 GKRDSRFGIEGYQYDPMGRLTGHLD---------PTGKLREFSYDSAGDLLKTHFRCGRL 1100 Query: 54 VHY------TRTQYAEPLVESRY-LYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYG 106 R + + RY YD LG V KR + Q Sbjct: 1101 TEIVNQGTEARDWIRDGEYDGRYWAYDQLGNLVRKRELQ---------------QDLVLQ 1145 Query: 107 WDGDRLTTIQ-------------NDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLA 153 WD L D ++T Y +F R A TQ + + Sbjct: 1146 WDAQGLLIESLIVRSPSADPESGGDVPDVRTHYAYDAFHRRTRKIAHVVRDAGTQTAAKS 1205 Query: 154 DTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSE-------ESRRWLASCGLTVEQ 206 D D L E+ ++ E R W+ V Sbjct: 1206 DATVLRRVSR---------FFWDGDALAGELAEIDGAQRVAAGNWEHREWIYYPDTFVPL 1256 Query: 207 MQNQMDPV------YTPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENP 260 + +I Y D G P + + G W YDE G L+ Sbjct: 1257 VSVIDAGTSCDLSRNRHGCRIFYYRYDANGRPTQMTDSSGREVWATGYDENGRLVPIN-- 1314 Query: 261 HQLQQLIRLPGQQYDEESGLYYNRHRYYDPLQGRYITQDPIGLKGGWNFYQYPLNPVQYI 320 + I L GQ D E+GL+YNRHRYYDP G +I++DP+GL G N Y+Y N + + Sbjct: 1315 ADIYNPIHLQGQYRDAETGLHYNRHRYYDPALGSFISKDPLGLAAGVNLYRYAPNSIGWA 1374 Query: 321 DSMGLASKYGHLNN 334 D +G +K NN Sbjct: 1375 DPLGFQAKPSPNNN 1388 Score = 86.0 bits (211), Expect = 2e-15, Method: Composition-based stats. Identities = 45/277 (16%), Positives = 79/277 (28%), Gaps = 38/277 (13%) Query: 10 DAHYLYRYDRHGRLTEKTDLIPEGV------------IRTDDERTHRYHYDSQHRLVHYT 57 +RYD +G L +T V + +R RY +D + LV T Sbjct: 620 GRTITWRYDAYGNLLMQTLPDRSVVRAEYNADHKPICLTVPGDRQWRYAWDKRGNLVAQT 679 Query: 58 RTQYAEPLVESRYLYDPLGRRVAK-------RVWRRERDLTGWMSLSRKPQVTWYGWDGD 110 A RY YD G+ VA + + D + +T Y D Sbjct: 680 TPTQAS----MRYGYDRHGQLVAHMGPRGAVTRFDYDHDGNLSAVVDALGHLTRYTHDAR 735 Query: 111 RLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFP 170 + + Y+ L R G + S + + + + Sbjct: 736 ANLIHTVNALGQVSRYEYDRNGNLTRAIEPGGREIFCRYDSSGNLTRYRDPNGQVTQLEY 795 Query: 171 PVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRG 230 L Q+ RL + R+ + ++ V +++ D G Sbjct: 796 SPLRQIAKRLTPD-----GGVVEYRYD---------TEERLIGVVNERGELYQLKRDALG 841 Query: 231 LPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLI 267 + + G + +Y G LL +P Sbjct: 842 RIVEEIDYWGQSR-RYQYGAAGELLRSVDPLGQAIDY 877 Score = 85.2 bits (209), Expect = 5e-15, Method: Composition-based stats. Identities = 48/276 (17%), Positives = 89/276 (32%), Gaps = 34/276 (12%) Query: 7 IARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLV 66 + D + Y +D+ G L +T + RY YD +LV + + A Sbjct: 659 VPGDRQWRYAWDKRGNLVAQTTPTQASM---------RYGYDRHGQLVAHMGPRGA---- 705 Query: 67 ESRYLYDPLGRRVAK-------RVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDR 119 +R+ YD G A + + +++ QV+ Y +D + T + Sbjct: 706 VTRFDYDHDGNLSAVVDALGHLTRYTHDARANLIHTVNALGQVSRYEYDRNGNLTRAIEP 765 Query: 120 TRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDR 179 + + S L R G++ + + S + + DGG V + + L Sbjct: 766 GGREIFCRYDSSGNLTRYRDPNGQVTQLEY-SPLRQIAKRLTPDGGVVEYRYDTEERLIG 824 Query: 180 LESE------ILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPA--RKIHLYHCDHRGL 231 + +E + D + Q + + + + Y D G Sbjct: 825 VVNERGELYQLKRDALGRIVEEIDYWGQSRRYQYGAAGELLRSVDPLGQAIDYETDVLGR 884 Query: 232 PL--ALVS---TEGATEWCAEYDEWGNLLNEENPHQ 262 + + G YD GNL+ ENP Sbjct: 885 IVKKRVPDPRQPGGIRTETFSYDRSGNLIVAENPDS 920 Score = 61.4 bits (147), Expect = 8e-08, Method: Composition-based stats. Identities = 49/297 (16%), Positives = 80/297 (26%), Gaps = 36/297 (12%) Query: 10 DAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESR 69 + Y Y R+ T + + D R L + R Sbjct: 510 GQPHRYAYTDGHRMVRHTSARGVSFYYSHRQHD-----DGVWR---VDHAWGDNGLADYR 561 Query: 70 YLYDPLGRRVA-------KRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRI 122 ++YD R + + + VT Y +D T Q D Sbjct: 562 FIYDVGHRETQITDSLGHVTILQANERDLPVARIDPLGAVTSYRYDAQGRTNAQTDPAGR 621 Query: 123 QTIYQPGSFTPLIRVETATGELAKTQRRSL---------ADTLQQSGGEDGGSVVFPPVL 173 ++ ++ L+ + + + + D + + G++V Sbjct: 622 TITWRYDAYGNLLMQTLPDRSVVRAEYNADHKPICLTVPGDRQWRYAWDKRGNLVAQTTP 681 Query: 174 VQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPL 233 Q R + V+ R A + N V H D R + Sbjct: 682 TQASMRYGYDRHGQLVAHMGPR-GAVTRFDYDHDGNLSAVVDALGHLTRYTH-DARANLI 739 Query: 234 ALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEESGLYYNRHRYYDP 290 V+ G EYD GNL P + R + SG N RY DP Sbjct: 740 HTVNALGQ-VSRYEYDRNGNLTRAIEPGGREIFCRY------DSSG---NLTRYRDP 786 Score = 59.8 bits (143), Expect = 2e-07, Method: Composition-based stats. Identities = 48/323 (14%), Positives = 86/323 (26%), Gaps = 68/323 (21%) Query: 9 RDAHYLYRYDRHGRLTEKTDLIPEGVIRTDD------------ERTHRYHYDSQHRLVHY 56 R A + YD G L+ D + T D + RY YD L Sbjct: 703 RGAVTRFDYDHDGNLSAVVDALGHLTRYTHDARANLIHTVNALGQVSRYEYDRNGNLTRA 762 Query: 57 TRTQYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWM-------SLSRKPQVTWYGWD- 108 E YD G R + + L+ V Y +D Sbjct: 763 IEPGGREIFC----RYDSSGNLTRYRDPNGQVTQLEYSPLRQIAKRLTPDGGVVEYRYDT 818 Query: 109 GDRLTTIQNDRT--------------------RIQTIYQPGSFTPLIRVETATGELAKTQ 148 +RL + N+R YQ G+ L+R G+ + Sbjct: 819 EERLIGVVNERGELYQLKRDALGRIVEEIDYWGQSRRYQYGAAGELLRSVDPLGQAIDYE 878 Query: 149 RRSLADTL-------QQSGGEDGGSVVFPPVL-----------VQMLDRLESEILADRVS 190 L + +Q GG + + V++ ++ +R Sbjct: 879 TDVLGRIVKKRVPDPRQPGGIRTETFSYDRSGNLIVAENPDSRVELAYDAAGRVVEERQG 938 Query: 191 E--ESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLAL-VSTEGATEWCAE 247 + + G +E+ A + + G ++ + E Sbjct: 939 DDFVIAHAYDAAGNRIERRTRLNAGGEVIAHTVRY-DYNALGAVSSIQIDDAAPIT--FE 995 Query: 248 YDEWGNLLNEENPHQLQQLIRLP 270 D G + E +L++ + Sbjct: 996 RDALGQIRVEHLRAELRRELSYT 1018 Score = 57.1 bits (136), Expect = 1e-06, Method: Composition-based stats. Identities = 30/201 (14%), Positives = 53/201 (26%), Gaps = 22/201 (10%) Query: 6 RIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPL 65 + + YDR G L + + YD+ R+V + Sbjct: 895 QPGGIRTETFSYDRSGNLIVAENPDSRVEL----------AYDAAGRVVEERQGD----D 940 Query: 66 VESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTI 125 + YD G R+ +R Y ++ + Sbjct: 941 FVIAHAYDAAGNRIERR-------TRLNAGGEVIAHTVRYDYNALGAVSSIQIDDAAPIT 993 Query: 126 YQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEIL 185 ++ + IRVE EL + +L L + G V+F + Sbjct: 994 FERDALGQ-IRVEHLRAELRRELSYTLDGLLAKQTLLAGTGVLFASEYAYDANGEMLGKR 1052 Query: 186 ADRVSEESRRWLASCGLTVEQ 206 R E ++ LT Sbjct: 1053 DSRFGIEGYQYDPMGRLTGHL 1073 Score = 55.6 bits (132), Expect = 4e-06, Method: Composition-based stats. Identities = 42/251 (16%), Positives = 66/251 (26%), Gaps = 28/251 (11%) Query: 16 RYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYLYDPL 75 YD G E+ + G T RY Y++ + A E D L Sbjct: 946 AYDAAGNRIERRTRLNAGGEVIAH--TVRYDYNALGAVSSIQIDDAAPITFER----DAL 999 Query: 76 GRRVAKRVWRRERDLTGWMSLSRKPQVT-----------WYGWDGDRLTTIQNDRTRIQT 124 G+ + + R + + T Y +D + + D Sbjct: 1000 GQIRVEHLRAELRRELSYTLDGLLAKQTLLAGTGVLFASEYAYDANGEMLGKRDSRFGIE 1059 Query: 125 IYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEI 184 YQ L TG+L + S D L+ + + + E Sbjct: 1060 GYQYDPMGRLTGHLDPTGKLREFSYDSAGDLLKTHFRCGRLTEIVNQGTEARDWIRDGEY 1119 Query: 185 LADRVSEESRRWLASC-GLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEG--- 240 R W G V + + Q D V + L P A + G Sbjct: 1120 DG-------RYWAYDQLGNLVRKRELQQDLVLQWDAQGLLIESLIVRSPSADPESGGDVP 1172 Query: 241 ATEWCAEYDEW 251 YD + Sbjct: 1173 DVRTHYAYDAF 1183 Score = 54.0 bits (128), Expect = 1e-05, Method: Composition-based stats. Identities = 32/267 (11%), Positives = 60/267 (22%), Gaps = 45/267 (16%) Query: 10 DAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLV--HYTRTQYAEPLVE 67 Y+Y G L D + + + Y D R+V + + Sbjct: 851 GQSRRYQYGAAGELLRSVDPLGQAI---------DYETDVLGRIVKKRVPDPRQPGGIRT 901 Query: 68 SRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQ 127 + YD G + +L +D + + Sbjct: 902 ETFSYDRSGNLIVAENPDSRVELA---------------YDAAGRVVEERQGDDFVIAHA 946 Query: 128 PGSFTPLIRVETATGELAK------TQRRSLADTLQQSGGEDGGSVVFPPVLVQMLD--- 178 + I T + + + +D + F + + Sbjct: 947 YDAAGNRIERRTRLNAGGEVIAHTVRYDYNALGAVSSIQIDDAAPITFERDALGQIRVEH 1006 Query: 179 -----RLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHL----YHCDHR 229 R E D + + + L + + R Y D Sbjct: 1007 LRAELRRELSYTLDGLLAKQTLLAGTGVLFASEYAYDANGEMLGKRDSRFGIEGYQYDPM 1066 Query: 230 GLPLALVSTEGATEWCAEYDEWGNLLN 256 G + G YD G+LL Sbjct: 1067 GRLTGHLDPTGKLR-EFSYDSAGDLLK 1092 >UniRef50_A9FQL9 Putative uncharacterized protein n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=A9FQL9_SORC5 Length = 2257 Score = 180 bits (456), Expect = 1e-43, Method: Composition-based stats. Identities = 71/324 (21%), Positives = 104/324 (32%), Gaps = 36/324 (11%) Query: 12 HYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHY--DSQHRLVHYTRTQYAEPLVESR 69 Y D GR+ T+ I T Y Y D RL R ++ + Sbjct: 1853 EVTYTPDALGRIQSLTETI--------QGDTATYAYVRDLNDRLTDVYR----NGVLTAH 1900 Query: 70 YLYDPLGRRVAKRVWRRERDLTGWMS---LSRKPQVTWYGWDGDRLTTIQNDRTRIQTIY 126 Y YD G R+A LS GD L T+ + T T Sbjct: 1901 YNYDVNGNRLAHTSSSGTAIGVYDDQDRLLSYGSTTYGVSPTGD-LATVTDTATAATTTL 1959 Query: 127 QPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILA 186 + L +V +G++ + + + D L+ Sbjct: 1960 MYDARGNLRQVVLGSGDVIEYLVDGENHRIWKKKNG------VMVQGFLYRDDLQPAAEL 2013 Query: 187 DRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVS-TEGATEWC 245 ++ V + + + DHRG P +V+ GA Sbjct: 2014 GPTGAVVAQFAYGQDRNVPDLVLKG-------GATYRILTDHRGSPRLVVNTATGAVAQR 2066 Query: 246 AEYDEWGNLLNEENPHQLQQLIRLPGQQYDEESGLYYNRHRYYDPLQGRYITQDPIGLKG 305 +YDE+G +L + NP Q G YD E+ L R YD GR+ +DPI G Sbjct: 2067 IDYDEFGRVLQDTNPGF--QPFGFAGGLYDAETKLVRFGARDYDAEVGRWTAKDPILFDG 2124 Query: 306 G-WNFYQYP-LNPVQYIDSMGLAS 327 G N Y Y +PV + D G Sbjct: 2125 GDANLYGYVLNDPVNFTDPNGYGP 2148 Score = 57.5 bits (137), Expect = 1e-06, Method: Composition-based stats. Identities = 46/343 (13%), Positives = 78/343 (22%), Gaps = 81/343 (23%) Query: 2 WPDNRI----ARDAHYLYRY---------------------DRHGRLTEKTDLIPEG--- 33 +PD R+ + Y Y D GR T+ T E Sbjct: 1576 YPDGRLSARTQGARTWTYTYEDNGWLTTATDPLLNTVSFLHDAVGRATQVTRADDEVIGT 1635 Query: 34 ---------VIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYLYDPLGRRVAKRVW 84 + D H + Y L Y ++ + YD G + Sbjct: 1636 SYYPGGLVHTVTPPDRPAHTFGYTPADLLEEYLAPAVGGGPGDTSWSYDLDGMLTSSARP 1695 Query: 85 RRERDLTGWMSLSRKP---------QVTWYGW---DGDRLTTIQNDRTRIQTIYQPGSFT 132 + + + YG+ G T + Y T Sbjct: 1696 GEAATVYTRDPSTGRLSQVALPLGMGTIGYGYHPTTGSLTTVSGPSGISLNFAYDGELLT 1755 Query: 133 PLIRVETATGELAKTQRRSLAD--TLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVS 190 L T G + + + + + + G ++ F +L + L+ Sbjct: 1756 GLTWTGTGFGGSSASVQWAYDNDFRIDTETVGGGATINFDYDADGLLTQAGGLTLSRHPG 1815 Query: 191 EESRR----WLASCGLTVEQMQNQMDPVYTPARKIHL---YHCDHRGLPLALVST----- 238 + + G+T + V Y D G +L T Sbjct: 1816 NGMYTGSTIGVVTDGVTHDAYGAVATYVAQANASTVYEVTYTPDALGRIQSLTETIQGDT 1875 Query: 239 ------------------EGATEWCAEYDEWGNLLNEENPHQL 263 G YD GN L + Sbjct: 1876 ATYAYVRDLNDRLTDVYRNGVLTAHYNYDVNGNRLAHTSSSGT 1918 Score = 52.1 bits (123), Expect = 5e-05, Method: Composition-based stats. Identities = 42/266 (15%), Positives = 56/266 (21%), Gaps = 38/266 (14%) Query: 15 YRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYLYDP 74 + Y GRL+ +T RT Y Y+ L T +L+D Sbjct: 1573 FTYYPDGRLSARTQ----------GARTWTYTYEDNGWLTTATDPLLN----TVSFLHDA 1618 Query: 75 LGRRVAKRVWRRERDLTGWM---------SLSRKPQVTWYGWDGDRLT-----TIQNDRT 120 +GR E T + R Y D L + Sbjct: 1619 VGRATQVTRADDEVIGTSYYPGGLVHTVTPPDRPAHTFGYTP-ADLLEEYLAPAVGGGPG 1677 Query: 121 RIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRL 180 Y L R L Q G + Sbjct: 1678 DTSWSYDLDGM--LTSSARPGEAATVYTRDPSTGRLSQVALPLG----MGTIGYGYHPTT 1731 Query: 181 ESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEG 240 S S S + L + A Y D R G Sbjct: 1732 GSLTTVSGPSGISLNFAYDGELLTGLTWTGTGFGGSSASVQWAYDNDFR--IDTETVGGG 1789 Query: 241 ATEWCAEYDEWGNLLNEENPHQLQQL 266 AT +YD G L + Sbjct: 1790 ATIN-FDYDADGLLTQAGGLTLSRHP 1814 >UniRef50_C3JCI6 Rhs family protein n=4 Tax=Bacteria RepID=C3JCI6_9PORP Length = 1387 Score = 180 bits (456), Expect = 1e-43, Method: Composition-based stats. Identities = 73/351 (20%), Positives = 112/351 (31%), Gaps = 36/351 (10%) Query: 39 DERTHRYHYDSQHRLVHYTRTQYAEPLVESRY-LYDPLGRRVAKRVWRRERDLTGWMSLS 97 T + YD L + VE+ Y D +G + + G L Sbjct: 1004 TGETILFDYDPWDNLFKADYREG--SQVETIYKAPDAIGNLFHTPDRKDRKYGKGGRLLE 1061 Query: 98 RKPQVTWYGWDGDRLTTIQNDRTRI--------QTIYQPGSFTPLIRVETATGELAKTQR 149 K Y +G+ + + Y+ L RV+ GE + + Sbjct: 1062 DKKFSYHYDGEGNLVLKQRLRPDETLAPLWQEGDWAYEWQGNGMLRRVKRPDGETVEFEY 1121 Query: 150 RSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQN 209 L + ++ V+ + ES++ WL G V + Sbjct: 1122 DPLGRRISKTYKGKTIRWVWDGNVPLHEWTEESDV---------TTWLFEEGTFVPTAKI 1172 Query: 210 QMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRL 269 D K + D+ G P + GA W D +G + Sbjct: 1173 VGD-------KSYSIITDYLGTPTHAFDSHGAKVWERNLDIYGKIR---TGDSTLVPFLF 1222 Query: 270 PGQQYDEESGLYYNRHRYYDPLQGRYITQDPIGLKGGWNFYQYPLNPVQYIDSMGLASKY 329 GQ +DEE L YNR RYYDP G YI+QDPI + G N Y Y + +ID GL+ Sbjct: 1223 QGQYFDEEIDLCYNRFRYYDPSTGTYISQDPISIAGRLNVYAYVHDSNSWIDPFGLSGT- 1281 Query: 330 GHLNNGGYGARPNKPPTPDPSKLPDIAKQLRLPYPIDQASSAPNVFKTFFR 380 G+ + P L +I + + D + K Sbjct: 1282 -----HGHHSDPKFMGGDPKQSLTNIKTEDHIDLHRDMNTYLETKTKVVNG 1327 Score = 73.3 bits (178), Expect = 2e-11, Method: Composition-based stats. Identities = 35/231 (15%), Positives = 62/231 (26%), Gaps = 28/231 (12%) Query: 4 DNRIARDAHYLYRYDRHGRLTEKTDLIPE-GVIRTDDERTHRYHYDSQHRLVHYTRTQYA 62 R+ D + Y YD G L K L P+ + E Y + L R Sbjct: 1056 GGRLLEDKKFSYHYDGEGNLVLKQRLRPDETLAPLWQEGDWAYEWQGNGMLRRVKRPDG- 1114 Query: 63 EPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDR-LTTIQNDRTR 121 + YDPLGRR++K K + + WDG+ L + Sbjct: 1115 ---ETVEFEYDPLGRRISKT---------------YKGKTIRWVWDGNVPLHEWTEESDV 1156 Query: 122 IQTIYQPGSFTPLIRVETATGELAKTQR-------RSLADTLQQSGGEDGGSVVFPPVLV 174 +++ G+F P ++ T D + Sbjct: 1157 TTWLFEEGTFVPTAKIVGDKSYSIITDYLGTPTHAFDSHGAKVWERNLDIYGKIRTGDST 1216 Query: 175 QMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYH 225 + + + + + R+ T + + H Sbjct: 1217 LVPFLFQGQYFDEEIDLCYNRFRYYDPSTGTYISQDPISIAGRLNVYAYVH 1267 Score = 61.4 bits (147), Expect = 7e-08, Method: Composition-based stats. Identities = 49/270 (18%), Positives = 74/270 (27%), Gaps = 28/270 (10%) Query: 13 YLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYLY 72 Y YD G + E D+ + YD H LV T E Sbjct: 462 IRYTYDDAGNMVETRDM---------QGAEKHFRYDG-HLLVQLTNQTGQNFYWEYEGKG 511 Query: 73 DPLGRRVAKR-------VWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTI 125 D R E ++ + + Y +D L D T+ Sbjct: 512 DDA--RCVHTWGDGGVLEHHTEYLPGHTLTRNSLGFTSQYFYDERNLIYKIIDEAGGVTL 569 Query: 126 YQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQML------DR 179 + + LI G K L D + E+G S + L Sbjct: 570 QEYNEYEELIVTVNPEGGSRKYTYNDLGD-VTCIENENGESTRYEYDEQGNLLNVTTPQG 628 Query: 180 LESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPA-RKIHLYHCDHRGLPLALVST 238 D +R + + Q Q T + L+ D + P+ L Sbjct: 629 ATHVWEYDEQDRVIKRSYPNGNTRSYEYQGQDLSKITDERGNVFLFDYDSKRRPIQLTYP 688 Query: 239 EGATEWCAEYDEWGNLLNEENPHQLQQLIR 268 G YD +G+L E +P + L R Sbjct: 689 NGTYRG-WLYDAFGHLSEERDPRGNRTLYR 717 Score = 58.3 bits (139), Expect = 6e-07, Method: Composition-based stats. Identities = 38/234 (16%), Positives = 65/234 (27%), Gaps = 25/234 (10%) Query: 48 DSQHRLVHYTRTQYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGW 107 DS+ R++ + RY YD G V R + + + Sbjct: 442 DSKGRVLELRTIFDGKEKSLIRYTYDDAGNMVETRDMQGAEKH--------------FRY 487 Query: 108 DGDRLTTIQND-RTRIQTIYQP-GSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGG 165 DG L + N Y+ G + G L TL ++ Sbjct: 488 DGHLLVQLTNQTGQNFYWEYEGKGDDARCVHTWGDGGVLEHHTEYLPGHTLTRNSLGFTS 547 Query: 166 SVVFPPVLVQM----LDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDP--VYTPAR 219 + + + + E G + D + Sbjct: 548 QYFYDERNLIYKIIDEAGGVTLQEYNEYEELIVTVNPEGGSRKYTYNDLGDVTCIENENG 607 Query: 220 KIHLYHCDHRGLPLALVSTEGAT-EWCAEYDEWGNLLNEENPHQLQQLIRLPGQ 272 + Y D +G L + + +GAT W EYDE ++ P+ + GQ Sbjct: 608 ESTRYEYDEQGNLLNVTTPQGATHVW--EYDEQDRVIKRSYPNGNTRSYEYQGQ 659 Score = 51.3 bits (121), Expect = 8e-05, Method: Composition-based stats. Identities = 57/409 (13%), Positives = 111/409 (27%), Gaps = 62/409 (15%) Query: 16 RYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYLYDPL 75 YD +G + V YD + +L + ++ + D Sbjct: 902 HYDAYGNRIRLCSDLGADV---------ALQYDKEGQLSGMQASDWSVAIGR-----DKS 947 Query: 76 GRRVAKRVWRRERDLTGWMSLSRKPQVT-----------WYGWD-GDRLTTIQNDRTRIQ 123 G + + + T L R+ + Y W G+ L N+ T Sbjct: 948 GLEMQRELSGGVSVTTDRDMLGREVRRDILSGGLEQSRMRYYWGMGNHLHRKVNELTGET 1007 Query: 124 TIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESE 183 ++ + L + + G +T ++ D + ++L+ + Sbjct: 1008 ILFDYDPWDNLFKADYREGSQVETIYKA-PDAIGNLFHTPDRKDRKYGKGGRLLEDKKFS 1066 Query: 184 ILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATE 243 D + T+ + + D Y G+ + +G T Sbjct: 1067 YHYDGEGNLVLKQRLRPDETLAPLWQEGD---------WAYEWQGNGMLRRVKRPDGETV 1117 Query: 244 WCAEYDEWGNLLNEENPHQLQQLIRLPG----QQYDEESGLYYNRHRYYDPLQGRYITQD 299 EYD G +++ + G ++ EES + +G ++ Sbjct: 1118 -EFEYDPLGRRISKTYKGKTI-RWVWDGNVPLHEWTEESDVTTWLF-----EEGTFV--- 1167 Query: 300 PIGLKGGWNFYQ----YPLNPVQYIDSMGLASKYGHLNNGGYGARPNKPPTP---DPSKL 352 P G Y Y P DS G +L+ G + P Sbjct: 1168 PTAKIVGDKSYSIITDYLGTPTHAFDSHGAKVWERNLDIYGKIRTGDSTLVPFLFQGQYF 1227 Query: 353 PDIA----KQLRLPYPIDQASSAPNVFKTFFRALSPYDYTLYCRKWVKP 397 + + R P + + L+ Y Y W+ P Sbjct: 1228 DEEIDLCYNRFRYYDPSTGTYISQDPISIA-GRLNVYAYVHDSNSWIDP 1275 Score = 49.8 bits (117), Expect = 2e-04, Method: Composition-based stats. Identities = 37/241 (15%), Positives = 70/241 (29%), Gaps = 42/241 (17%) Query: 6 RIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPL 65 R R LYR D G L R D HR+ YD+ LVH L Sbjct: 707 RDPRGNRTLYRSDEVGNLLWM---------READGNEHRFTYDTSGNLVHAKDR-----L 752 Query: 66 VESRYLYDPLGRRVAKRVWRRERDLTGWMSL------SRKPQVTWY------------GW 107 E R+ Y LG +++ R L + ++ + G+ Sbjct: 753 REVRWRYGSLGTLLSRTQNGRTVRFEYDTELQLTGIANEGGELYRFALNGCGDVVDEWGF 812 Query: 108 DGDRLTTIQNDRTRIQ---------TIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQ 158 DG ++ R+ + Y+ ++ + + G + + L Sbjct: 813 DGLHRHYERDGAGRVSKVLRPDERWSTYEYDGVGHIVSEQHSDGSASAYKYNKDG-LLVA 871 Query: 159 SGGEDGGSVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPA 218 + + + ++L + E + + + C + Q D + Sbjct: 872 AFNDATRIALVRGRDGRVLQETQGERTVESHYDAYGNRIRLCSDLGADVALQYDKEGQLS 931 Query: 219 R 219 Sbjct: 932 G 932 >UniRef50_B2PVY9 Putative uncharacterized protein n=12 Tax=Enterobacteriaceae RepID=B2PVY9_PROST Length = 707 Score = 180 bits (456), Expect = 1e-43, Method: Composition-based stats. Identities = 72/333 (21%), Positives = 123/333 (36%), Gaps = 39/333 (11%) Query: 12 HYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYL 71 + YD L D V Y YDS+ RL + + + ++ Sbjct: 277 SRKWFYDEQDNLGAMEDHYRGWVE---------YLYDSEQRLKKVSSGENMDAML----F 323 Query: 72 YDPLGRRVAKRVWRRERDLTGWMSLSRKPQV--------TWYGWDGDRLTTIQNDRTRIQ 123 YD + + E +LS + + G+ ++ + ++ + Sbjct: 324 YDRADNLLERPQSEIEAQTPSMPALSPQGDRLLQFQGWQYRHDAYGNVISRVHPNQAKQT 383 Query: 124 TIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGED--GGSVVFPPVLVQMLDRLE 181 YQ L+ + + A+ +L + + G V RL Sbjct: 384 --YQYDGDNRLV-IAQTSDMKAQYHYDALGRRIHKVVESRAYGTLKRHETHFVWQGLRLL 440 Query: 182 SEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGA 241 E + ++ + T + + Y + +HCD PL + + +G Sbjct: 441 QEQDINTSKHQTYCYEEHGSYTPLAVIVKQPSGYH----YYWHHCDINSAPLDVTNEQGN 496 Query: 242 TEWCAEYDEWGNLL---------NEENPHQLQQLIRLPGQQYDEESGLYYNRHRYYDPLQ 292 T W +Y+ +G + E +Q +R GQ +D E+GL++N R+YDP Sbjct: 497 TVWSGKYERFGFVRSSPLSFYSDPERKMESFEQNLRYAGQYFDNETGLHFNTFRFYDPQI 556 Query: 293 GRYITQDPIGLKGGWNFYQYPLNPVQYIDSMGL 325 GR+I DPIGL GG N YQY NP+ +ID G Sbjct: 557 GRFIMPDPIGLLGGINLYQYAPNPLGWIDPWGW 589 Score = 86.4 bits (212), Expect = 2e-15, Method: Composition-based stats. Identities = 41/236 (17%), Positives = 73/236 (30%), Gaps = 30/236 (12%) Query: 4 DNRIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAE 63 +R+ + + YR+D +G + + ++ Y YD +RLV + Sbjct: 352 GDRLLQFQGWQYRHDAYGNVISRVH---------PNQAKQTYQYDGDNRLVIAQTSDM-- 400 Query: 64 PLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQ 123 +++Y YD LGRR+ K V R T + W G RL Q+ T Sbjct: 401 ---KAQYHYDALGRRIHKVVESRAYGTLKRHE-------THFVWQGLRLLQEQDINTSKH 450 Query: 124 TIYQP---GSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRL 180 Y GS+TPL + ++ + G+ V+ + Sbjct: 451 QTYCYEEHGSYTPLAVIVKQPSGYHYYWHHCDINSAPLDVTNEQGNTVWSGKYERFGFVR 510 Query: 181 ESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIH------LYHCDHRG 230 S + E Q + ++ + + D G Sbjct: 511 SSPLSFYSDPERKMESFEQNLRYAGQYFDNETGLHFNTFRFYDPQIGRFIMPDPIG 566 Score = 72.1 bits (175), Expect = 4e-11, Method: Composition-based stats. Identities = 40/309 (12%), Positives = 90/309 (29%), Gaps = 41/309 (13%) Query: 16 RYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRT------QYAEPLVESR 69 +YD G L ++ L +++Y +DS +RL+ +R + + Sbjct: 114 QYDPAGNLVQRETLTD----------SYQYQWDSLNRLLVASRQPNQLGLEMGLQANQVH 163 Query: 70 YLYDPLGRRVAKRVWRRERDLTGW--------MSLSRKPQVTWYGWDGDRLTTIQNDRTR 121 + YD LGR ++ + Y G Sbjct: 164 FTYDALGRITREQTGDDIVEFAYDELNNLSCLTLPQGDSLNWLYYGSGHATAINHLVDGT 223 Query: 122 IQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLE 181 I + + G L + ++ + + + Sbjct: 224 PHLITEFERDDLHREISRTQGALTQYRQYDKLGRTISTFSSRNKPHPLNGIASSRKWFYD 283 Query: 182 SEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALV----- 236 + + + R W+ + ++++ A + + P + + Sbjct: 284 EQDNLGAMEDHYRGWVEYLYDSEQRLKKVSSGENMDAMLFYDRADNLLERPQSEIEAQTP 343 Query: 237 -----STEGATE-----WCAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEESGLYYNRHR 286 S +G W +D +GN+++ +P+Q +Q + G + + + Sbjct: 344 SMPALSPQGDRLLQFQGWQYRHDAYGNVISRVHPNQAKQTYQYDGDNRLVIAQTSDMKAQ 403 Query: 287 Y-YDPLQGR 294 Y YD GR Sbjct: 404 YHYD-ALGR 411 Score = 58.3 bits (139), Expect = 6e-07, Method: Composition-based stats. Identities = 38/256 (14%), Positives = 64/256 (25%), Gaps = 39/256 (15%) Query: 10 DAHYLYRYDRHGRLTEKTDLIPEG------------VIRTDDERTHRYHYDSQHRLVHYT 57 H Y Y+ G L + D+ +Y Y+S RL T Sbjct: 38 ARHIHYHYNAEGVLISIENANGGRYLLNRDAEGRLIEEIRPDDTLLQYRYNSFGRLAEET 97 Query: 58 R---TQYAEPLVESRYLYDPLGRRVAKRVWRRERDL----------------TGWMSLSR 98 R + P YDP G V + + + Sbjct: 98 RLGDRVFPSPARTVLLQYDPAGNLVQRETLTDSYQYQWDSLNRLLVASRQPNQLGLEMGL 157 Query: 99 KPQVTWYGWDGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQ 158 + + +D T + I + L + G+ Sbjct: 158 QANQVHFTYDALGRITREQTGDDIV-EFAYDELNNLSCLTLPQGDSLNWLYYGSGHATAI 216 Query: 159 SGGEDGGSVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDP----V 214 + DG + + D L EI + + R G T+ ++ P Sbjct: 217 NHLVDGTPHL---ITEFERDDLHREISRTQGALTQYRQYDKLGRTISTFSSRNKPHPLNG 273 Query: 215 YTPARKIHLYHCDHRG 230 +RK D+ G Sbjct: 274 IASSRKWFYDEQDNLG 289 Score = 50.6 bits (119), Expect = 1e-04, Method: Composition-based stats. Identities = 41/274 (14%), Positives = 77/274 (28%), Gaps = 45/274 (16%) Query: 9 RDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRL--------------- 53 + + YD GR+T +T D+ + YD + L Sbjct: 158 QANQVHFTYDALGRITR---------EQTGDDIVE-FAYDELNNLSCLTLPQGDSLNWLY 207 Query: 54 ------VHYTRTQYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGW 107 P + + + D L R +++ + L R Sbjct: 208 YGSGHATAINHLVDGTPHLITEFERDDLHREISRTQ-GALTQYRQYDKLGRTISTF---- 262 Query: 108 DGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSV 167 R + + L +E + S + S GE+ ++ Sbjct: 263 -SSRNKPHPLNGIASSRKWFYDEQDNLGAMEDHYRGWVEYLYDSEQRLKKVSSGENMDAM 321 Query: 168 VFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIH----- 222 +F +L+R +SEI A S + L + Q + D ++H Sbjct: 322 LFYDRADNLLERPQSEIEAQTPSMPALSPQGDRLLQFQGWQYRHDAYGNVISRVHPNQAK 381 Query: 223 -LYHCDHRGLPLALVSTEGATEWCAEYDEWGNLL 255 Y D G +++ + YD G + Sbjct: 382 QTYQYD--GDNRLVIAQTSDMKAQYHYDALGRRI 413 Score = 42.5 bits (98), Expect = 0.034, Method: Composition-based stats. Identities = 34/267 (12%), Positives = 74/267 (27%), Gaps = 37/267 (13%) Query: 33 GVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYLYDPLGRRVAKRVWRRERDLTG 92 + +D ++ Y++ R+ T+ + Y Y+ G ++ R L Sbjct: 10 THHQRNDNTPRQWQYNAFGRVT----TEIDKLARHIHYHYNAEGVLISIENANGGRYLLN 65 Query: 93 WMSLSRKPQVTW-------YGWDGDRLTTIQN-------DRTRIQTIYQPGSFTPLIRVE 138 + R + Y ++ + + Q L++ E Sbjct: 66 RDAEGRLIEEIRPDDTLLQYRYNSFGRLAEETRLGDRVFPSPARTVLLQYDPAGNLVQRE 125 Query: 139 TATGELAKTQRRSLADTLQQSGGEDGGSVVFP--PVLVQMLDRLESEILADRVSEESRRW 196 T T + Q SL L S + + V I ++ ++ + Sbjct: 126 TLTDS-YQYQWDSLNRLLVASRQPNQLGLEMGLQANQVHFTYDALGRITREQTGDDIVEF 184 Query: 197 LAS--CGLTVEQMQNQMDPVYTPARKIHLYHCDHR--GLPLALVS------------TEG 240 L+ + + H +H G P + T+G Sbjct: 185 AYDELNNLSCLTLPQGDSLNWLYYGSGHATAINHLVDGTPHLITEFERDDLHREISRTQG 244 Query: 241 ATEWCAEYDEWGNLLNEENPHQLQQLI 267 A +YD+ G ++ + + Sbjct: 245 ALTQYRQYDKLGRTISTFSSRNKPHPL 271 >UniRef50_B6B5M8 Putative uncharacterized protein n=1 Tax=Rhodobacterales bacterium Y4I RepID=B6B5M8_9RHOB Length = 2516 Score = 180 bits (455), Expect = 1e-43, Method: Composition-based stats. Identities = 73/407 (17%), Positives = 111/407 (27%), Gaps = 89/407 (21%) Query: 3 PDNRIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHR--YHYDSQHRLVHYTRTQ 60 D R+ + Y YD G +T D + V + R Y YD RL+ + + Sbjct: 1787 ADGRV--LQNVAYAYDADGHITSVRDDAQQAVFFANAVVEPRCDYTYDPFGRLIQASGRE 1844 Query: 61 YAEPL--------------------------VESRYLYDPLGRRVAKRVWRRERDLTGWM 94 + RY YD G ++ R GW Sbjct: 1845 HTPSNIVQRDAAPGEPLIGVPFANDAAALQTYTQRYAYDLSGNIISMRHQSGANPSAGWQ 1904 Query: 95 SLSRKPQVTWYGWDGDRLTTIQNDRT-----------------RIQTIYQ---------- 127 + D +RL + Y Sbjct: 1905 RC------YQHALDSNRLLATGAPGEVGAGTACPAPHVAAPTLSGRYAYDAAGCMGAMPH 1958 Query: 128 -----PGSFTPLIR-----VETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQML 177 LI V E L++ S P Q Sbjct: 1959 LPLMQWDYRNRLITSARQVVADGLPETTHYVYDGAGTRLRKITLRATESTNAAPRARQER 2018 Query: 178 DRLESEILADRVSEESRRWL------------ASCGLTVEQMQNQMDPVYTPARKIHLYH 225 L + + L L PV A ++ + Sbjct: 2019 ISLGGWERYREFAADGETVLLERLTLHAADETGRVALIETLTVENGVPVAATAPEMRFHF 2078 Query: 226 CDHRGLPLALVSTEGATEWCAEYDEWGNLL---NEENPHQLQQLIRLPGQQYDEESGLYY 282 +H G + + A E+ +G+ + R G++ DEE+GL + Sbjct: 2079 GNHLGSAVLELDESAAVIAYEEFHPFGSTAYLGGRSAREVAARRFRYIGRERDEETGLGH 2138 Query: 283 NRHRYYDPLQGRYITQDPIGLKGGWNFYQYPLN-PVQYIDSMGLASK 328 + RYY P GR+ + DPIG G N Y+Y N PV D+ GL + Sbjct: 2139 HGLRYYAPWLGRWTSPDPIGTGDGLNVYRYAGNDPVGASDASGLMKE 2185 Score = 49.4 bits (116), Expect = 3e-04, Method: Composition-based stats. Identities = 35/280 (12%), Positives = 56/280 (20%), Gaps = 23/280 (8%) Query: 7 IARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRY---HYDSQHRLVHYTRTQYAE 63 AR YD R TE Y H D RL Y Sbjct: 1575 TARGDRLRAVYDILRRPTETHLTEQAAGGPERLVERRHYGESHPDPAARLRQRLHLHYDG 1634 Query: 64 PLVESRYLYDPLGRRV--AKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTR 121 YD G + A+R+ R R W +L+ ++ T Sbjct: 1635 AGEVQTTGYDFQGNILGSARRLRRDSRGTLDWSALAGAASAAALQATAAAQLEAESLNTA 1694 Query: 122 IQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGS----VVFPPVLVQML 177 + G L + ++ G ++ Sbjct: 1695 TLF----DRLGRARQRIDPDGSLTRMGYDIAGALVRLEVQPRGTGPVRAILDGVTYNARG 1750 Query: 178 DRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVS 237 R + + + + Y D G ++ Sbjct: 1751 QRAAARYAIAGSAAVEVTHIYDPETWRLGRHRSTRSADGRVLQNVAYAYDADGHITSVRD 1810 Query: 238 TEGATE----------WCAEYDEWGNLLNEENPHQLQQLI 267 YD +G L+ I Sbjct: 1811 DAQQAVFFANAVVEPRCDYTYDPFGRLIQASGREHTPSNI 1850 Score = 41.3 bits (95), Expect = 0.083, Method: Composition-based stats. Identities = 30/227 (13%), Positives = 54/227 (23%), Gaps = 15/227 (6%) Query: 6 RIARDAH-YLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEP 64 RI D YD G L Y+++ + Sbjct: 1706 RIDPDGSLTRMGYDIAGALVRLEVQPRGTGPVRAILDGV--TYNARGQRAAARYAIAGSA 1763 Query: 65 LVESRYLYDP----LGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRT 120 VE ++YDP LGR + R + +T D + N Sbjct: 1764 AVEVTHIYDPETWRLGRHRSTRSADGRVLQNVAYAYDADGHITSVRDDAQQAVFFANAVV 1823 Query: 121 RIQTIYQPGSFTPLIRVETATGELAKTQRRSLADT--------LQQSGGEDGGSVVFPPV 172 + Y F LI+ + +R A + + + Sbjct: 1824 EPRCDYTYDPFGRLIQASGREHTPSNIVQRDAAPGEPLIGVPFANDAAALQTYTQRYAYD 1883 Query: 173 LVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPAR 219 L + + + A+ + R + + V Sbjct: 1884 LSGNIISMRHQSGANPSAGWQRCYQHALDSNRLLATGAPGEVGAGTA 1930 >UniRef50_C6CPH2 YD repeat protein n=11 Tax=Enterobacteriaceae RepID=C6CPH2_DICZE Length = 1423 Score = 180 bits (455), Expect = 1e-43, Method: Composition-based stats. Identities = 83/393 (21%), Positives = 122/393 (31%), Gaps = 63/393 (16%) Query: 4 DNRIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDD----------------ERTHRYHY 47 D + YRYD G LT R D + R+HY Sbjct: 998 DGHLLAAQTREYRYDGAGNLTGVRHNRDAEGYRLDATGRVQAVLSGGAGKPVDTLARFHY 1057 Query: 48 ------DSQHRLVHYTRTQYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQ 101 RL + + + ++ Y YD GR + K+V + +PQ Sbjct: 1058 TRTGLPQEAGRLTEWQSGRLVQHD-DTHYQYDRAGRLIRKQVVQ----------PGYRPQ 1106 Query: 102 VTWYGWDGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGG 161 V Y WD S L V+T +GE + + + Sbjct: 1107 VWQYRWD---------------------SRNQLRVVDTPSGERWLYRYDPFGRRVGKRCD 1145 Query: 162 EDGGSVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKI 221 + + + Q+ E R W+ + V Q + + Sbjct: 1146 QKAEEIRYQWDGDQI---AEIRHYRHGQLVARRHWVYNGWELVVQQRQHTGGDWETD--- 1199 Query: 222 HLYHCDHRGLPLALVSTEGATEWCA-EYDEWGNLLNEENPHQLQQLIRLPGQQYDEESGL 280 P AL + +G W A + WG E++ + GQ D ESGL Sbjct: 1200 -FVTSSQNSTPQALFTPDGTLRWQAPKATLWGQRQAEKSESPDPG-LAFAGQLRDSESGL 1257 Query: 281 YYNRHRYYDPLQGRYITQDPIGLKGGWNFYQYPLNPVQYIDSMGLASKYGHLNNGGYGAR 340 YNR RYYDP G Y++ DPIG+ GG N Y Y NP+ +ID +GLA Sbjct: 1258 CYNRFRYYDPAGGCYVSPDPIGIAGGDNNYAYAPNPITWIDPLGLAGCSIQKLEEKGFTG 1317 Query: 341 PNKPPTPDPSKLPDIAKQLRLPYPIDQASSAPN 373 A + + Sbjct: 1318 VKSTKNGGLDYANSNALYSKEGVNPIRRIEYTG 1350 Score = 77.2 bits (188), Expect = 1e-12, Method: Composition-based stats. Identities = 44/264 (16%), Positives = 75/264 (28%), Gaps = 32/264 (12%) Query: 15 YRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYLYDP 74 YR D GRL E + Y YD+ HRL + + +RY YD Sbjct: 463 YRQDEQGRLVEADATHAYHLY---------YEYDAAHRLTRW----HDNDQTWARYEYDA 509 Query: 75 LGRRVAKR------VWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQP 128 GR V R + + Q + +G++ L + + T Y+ Sbjct: 510 QGRCVYTTCADGFLTARFDYLPDRVVMTDGLGQRSEFGFNDLHLMSWEQSPLGHVTRYEY 569 Query: 129 GSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADR 188 L+R + G + + + G + Q L + Sbjct: 570 DEVGNLLREISPAGRVVEFGYLDDTGRVSTFTDASGHQWQYAYDDEQRLCGVT------D 623 Query: 189 VSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWCAEY 248 W E++ + GL + G + +Y Sbjct: 624 PLGREWGWAYDAEGNPERLTGPDASEVRFTWNRY-------GLLTQVSDAAGEVQARLQY 676 Query: 249 DEWGNLLNEENPHQLQQLIRLPGQ 272 D LL+ + + +R GQ Sbjct: 677 DHRQRLLSATDAESRTRQLRYDGQ 700 Score = 64.1 bits (154), Expect = 1e-08, Method: Composition-based stats. Identities = 39/259 (15%), Positives = 73/259 (28%), Gaps = 47/259 (18%) Query: 3 PDNRIARDAH-----YLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYT 57 D R+ R+ Y YD G R + T + YD++ L+ T Sbjct: 807 ADGRVIRERDMTGTETHYGYDEDGLCISV---------RNGEGDTRHFLYDARGLLLRET 857 Query: 58 RTQYAEPLVESRYLYDPLGRRVA------------------KRVWRRERDLTGWMSLSRK 99 Y YD +GR R W LT + + Sbjct: 858 APDD-----TLHYRYDAVGRLTEVSSATAHVQLDYDLRDRVVREWHNGTLLTRQYDDTAR 912 Query: 100 PQVTWYGWDGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQS 159 WDGD + +++ L +V+ G + + + Sbjct: 913 TVTRTLTWDGDA-GDTTGTLAPLTSLFHYTRTGELRQVQLPDGADLTLTQDAAGRESHRR 971 Query: 160 GGEDGGSVVFPPVLVQMLDRLES-EILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPA 218 GG V+ + + + ++ ++R + + +++ D Sbjct: 972 GGSGFVQQREYDVMGWLTREMSGAQHDGHLLAAQTREYRYDGAGNLTGVRHNRDAEG--- 1028 Query: 219 RKIHLYHCDHRGLPLALVS 237 Y D G A++S Sbjct: 1029 -----YRLDATGRVQAVLS 1042 Score = 63.3 bits (152), Expect = 2e-08, Method: Composition-based stats. Identities = 45/322 (13%), Positives = 75/322 (23%), Gaps = 71/322 (22%) Query: 13 YLYRYDRHGRLTE-------------KTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRT 59 Y YD G L D +Y YD + RL T Sbjct: 565 TRYEYDEVGNLLREISPAGRVVEFGYLDDTGRVSTFTDASGHQWQYAYDDEQRLCGVTDP 624 Query: 60 QY-----------------AEPLVESRYLY----------DPLGRRVAKRVWRRERDLTG 92 E R+ + D G A+ + + L Sbjct: 625 LGREWGWAYDAEGNPERLTGPDASEVRFTWNRYGLLTQVSDAAGEVQARLQYDHRQRLLS 684 Query: 93 WMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSL 152 + + Y + + D R + Y+ S+T ++ + + Q Sbjct: 685 ATDAESRTRQLRYDGQDRVVQWQRADGARFRLGYRRASWTLPEQLIRPDDKEEQRQYDRH 744 Query: 153 ADTLQQSGGED-------------GGSVVFPPVLVQMLDRLESEILADRVSEESRR---W 196 + L G ES+ L ++ + R W Sbjct: 745 NNLLSYVDGNGALWRQTFGPFDLLTARTDAEGRTWHYAYDKESQQLTTVIAPDGSRWQWW 804 Query: 197 LASCGLTVEQMQNQMD-------------PVYTPARKIHLYHCDHRGLPLALVSTEGATE 243 L + G + + V + D RGL L + + Sbjct: 805 LDADGRVIRERDMTGTETHYGYDEDGLCISVRNGEGDTRHFLYDARGLLLRETAPDDTL- 863 Query: 244 WCAEYDEWGNLLNEENPHQLQQ 265 YD G L + Q Sbjct: 864 -HYRYDAVGRLTEVSSATAHVQ 884 Score = 47.5 bits (111), Expect = 0.001, Method: Composition-based stats. Identities = 42/304 (13%), Positives = 76/304 (25%), Gaps = 30/304 (9%) Query: 8 ARDAHYLYRYDRHGRLT--------------EKTDLIPEGVIRTDDERTHRYHYDSQHRL 53 A RYD R+ + + D++ + YD + L Sbjct: 688 AESRTRQLRYDGQDRVVQWQRADGARFRLGYRRASWTLPEQLIRPDDKEEQRQYDRHNNL 747 Query: 54 VH------YTRTQYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGW 107 + Q P D GR + + LT ++ W Sbjct: 748 LSYVDGNGALWRQTFGPFDLLTARTDAEGRTWHYAYDKESQQLTTVIAPDGSRWQWWLDA 807 Query: 108 DGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSV 167 DG + T Y I V G+ + L+++ +D Sbjct: 808 DGRVIRERDMTGTETHYGYDEDGL--CISVRNGEGDTRHFLYDARGLLLRETAPDDTLHY 865 Query: 168 VFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCD 227 + V ++ + + + R + + D T R + Sbjct: 866 RYDAVG-RLTEVSSATAHVQLDYDLRDRVVREWHNGTLLTRQYDDTARTVTRTLTW---- 920 Query: 228 HRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIR--LPGQQYDEESGLYYNRH 285 G T Y G L + P + G++ G + + Sbjct: 921 -DGDAGDTTGTLAPLTSLFHYTRTGELRQVQLPDGADLTLTQDAAGRESHRRGGSGFVQQ 979 Query: 286 RYYD 289 R YD Sbjct: 980 REYD 983 >UniRef50_Q48IL5 Insecticidal toxin complex protein, putative n=2 Tax=Pseudomonas syringae group RepID=Q48IL5_PSE14 Length = 923 Score = 180 bits (455), Expect = 2e-43, Method: Composition-based stats. Identities = 57/365 (15%), Positives = 98/365 (26%), Gaps = 44/365 (12%) Query: 3 PDNRIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDER--THRYHYDSQHRLVHYTRTQ 60 D ++ H LY YD G + D Y YD+ ++L+ T T+ Sbjct: 296 ADGQL--LQHLLYDYDPMGNVLRIEDRAQPTRCYAGQRIEPVSTYQYDTLYQLIQATGTE 353 Query: 61 YAE-------------------PLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQ 101 A+ Y YD G + + ++ Sbjct: 354 SAKLNQGPVFPSFQAPLDPAQLANYTQTYRYDARGNLLQLTHTGTQSHSRTLVTSQTNNH 413 Query: 102 V---------------TWYGWDGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAK 146 + +G+ Q + R E + + Sbjct: 414 SLPVINDQPPDEAAIAAAFDANGNLSELQAGQAMSWDWRNQLQQVRSVAR-EAGDDDRER 472 Query: 147 TQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQ 206 + L + ++V + + A + A Sbjct: 473 YVYDASGQRLCKIHTTTAKALVHIAEVRYLPGLEVHSNSATAETLHVIVTQAGRNEVRVL 532 Query: 207 MQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQL 266 P ++ DH G + Y +G ++ Sbjct: 533 HWQAGQPEGLENDQVRYSFADHLGSGTLELDKNAHIISQESYYPFGGTSWWAGRSTVEAS 592 Query: 267 I---RLPGQQYDEESGLYYNRHRYYDPLQGRYITQDPIGLKGGWNFYQYPLN-PVQYIDS 322 R G++ D +GLYY RYY P R+I DP G G N Y++ N P+++ D Sbjct: 593 YKTIRYSGKERDA-TGLYYYGLRYYAPWLQRWINPDPAGTVDGMNLYRFVRNSPLRFADQ 651 Query: 323 MGLAS 327 G A Sbjct: 652 QGTAP 656 >UniRef50_Q396B9 Rhs family protein n=1 Tax=Burkholderia sp. 383 RepID=Q396B9_BURS3 Length = 1556 Score = 179 bits (454), Expect = 2e-43, Method: Composition-based stats. Identities = 78/422 (18%), Positives = 141/422 (33%), Gaps = 27/422 (6%) Query: 12 HYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYL 71 Y Y G L +D + + +Y YD HRL+ + + RY Sbjct: 1005 RVTYEYSGAGELRRISD---------NQKGDTQYQYDRAHRLIG----EMSSGWQACRYE 1051 Query: 72 YDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQPGSF 131 YDP G +A + G + Y +D + + +T Y+ S Sbjct: 1052 YDPAGNLLALPTCPMMQYTGGNRLST--TSRGQYTYDERNHLSEEIAHDGRRTTYRYDSM 1109 Query: 132 TPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSE 191 L+RVE + A T +G ++ +V + DRL +++ Sbjct: 1110 DLLVRVEWSDRHDAWTAEYDGLCRQVIAGTDNDSTVYY-----WDEDRLAAQVDPGGKVR 1164 Query: 192 ESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEW-CAEYDE 250 + + + + + G+P + G W + Sbjct: 1165 VFVYVDEKSLVPFMFIDYPSIDSPATSGSEYFVLFNQVGMPERIEDVSGRAVWLARKIHS 1224 Query: 251 WGNLLNEENPHQLQQLIRLPGQQYDEESGLYYNRHRYYDPLQGRYITQDPIGLKGGWNFY 310 +G ++ + L+ +R PG + E+GL+ NR R Y+P+ GRY+ DP+G GG N Y Sbjct: 1225 YG-VIEVAEGNSLEYDVRWPGHLFQRETGLHVNRFRSYNPMLGRYLQSDPVGHAGGGNLY 1283 Query: 311 QYPLNPVQYIDSMGLASKYGHLNNGGYGARPNKPPTPDPSKLPDIAKQLRLPYPIDQASS 370 Y NPV +D +GL + + P P ++ A+ L + + Sbjct: 1284 TYSANPVVEVDVLGLNAHVHGEDAS--EPSPEGPAVAGRTQELTKAELNHLAKIERRTAE 1341 Query: 371 APNVFKTFFRALSPYDYTLYCRKWVKPNLTCTPQDDSQYPGMDTKTASDYLPQTNWPTTQ 430 + R + + + N P+ + + + N Sbjct: 1342 RDAAIERMKREIENLEQEKKKLSLDEKNWYSYPETPET---KRLDAIRERVLELNDKIKN 1398 Query: 431 LP 432 P Sbjct: 1399 YP 1400 Score = 61.7 bits (148), Expect = 6e-08, Method: Composition-based stats. Identities = 53/346 (15%), Positives = 90/346 (26%), Gaps = 74/346 (21%) Query: 2 WPDNRIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRL-------- 53 WPD R + D GR+ +T++ T R+ YD+ L Sbjct: 728 WPDERRQQR-------DVAGRVIARTNI---------SGHTERFEYDADDNLLLRFDQDG 771 Query: 54 --VHYTR-------TQYAEPLVESRYLY----------DPLGRRVAKRVWRRERDLTGWM 94 YTR ++ RY Y D G + + ++ +T Sbjct: 772 AATRYTRCSWNLLASEENALGETIRYRYTSRRDVASVIDANGN-ESAYSYDFKKRMTSVT 830 Query: 95 SLSRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLAD 154 R + Y GDRL ++ + ++ G A+G + Sbjct: 831 RHGRLRESYVYD-GGDRLIEKRDGAGKWLLRFEIGENGLPRERTLASGSKHVYEYDRFGH 889 Query: 155 TLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSEES--RRWLASCGLTVEQMQNQMD 212 + S + F + + D+ + + R V Sbjct: 890 LTKASTDAHEITRTFDNLGRRTSDKCDGLGVQHEYDGHRLGRTTYLERFEVVYTYTASGQ 949 Query: 213 PVYTPARKIHLYHCDHRGLPLA----------LVST----EGATEWC-----------AE 247 + TP + H G L + G W E Sbjct: 950 SIRTPGGRTHCVQQGKDGRVLLRLANGTQACYMFDDVGRCTGRITWRTDSPAAFHRVTYE 1009 Query: 248 YDEWGNLLNEENPHQLQQLIRL-PGQQYDEESGLYYNRHRY-YDPL 291 Y G L + + + + E + RY YDP Sbjct: 1010 YSGAGELRRISDNQKGDTQYQYDRAHRLIGEMSSGWQACRYEYDPA 1055 Score = 59.1 bits (141), Expect = 4e-07, Method: Composition-based stats. Identities = 25/124 (20%), Positives = 36/124 (29%), Gaps = 14/124 (11%) Query: 10 DAHYLYRYDRHGRLTEKTD---LIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLV 66 Y YD G L + G R +Y YD ++ L + A Sbjct: 1045 WQACRYEYDPAGNLLALPTCPMMQYTGGNRLSTTSRGQYTYDERNHLSE----EIAHDGR 1100 Query: 67 ESRYLYDPLGRRVAKRVWRRERDLTGWMS-------LSRKPQVTWYGWDGDRLTTIQNDR 119 + Y YD + V R T T Y WD DRL + Sbjct: 1101 RTTYRYDSMDLLVRVEWSDRHDAWTAEYDGLCRQVIAGTDNDSTVYYWDEDRLAAQVDPG 1160 Query: 120 TRIQ 123 +++ Sbjct: 1161 GKVR 1164 Score = 54.0 bits (128), Expect = 1e-05, Method: Composition-based stats. Identities = 45/300 (15%), Positives = 72/300 (24%), Gaps = 49/300 (16%) Query: 4 DNRIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAE 63 D + R YD+ GR+ E +G D R RY YD+++ L Y A Sbjct: 490 DGNVRRTVSLR--YDQSGRIVEVVLTDVDGR----DTRIARYAYDTENCLTSYRNALDA- 542 Query: 64 PLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVT--------WYGWDGDRLTTI 115 S Y YD R L + S R + + + R Sbjct: 543 ---ISTYEYDAQRRMARLAGANGYSFLYCYDSEGRCVESAGQDRMWHVRFQYRPGRTIVT 599 Query: 116 QNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQ 175 + D R +Y + V G +A+ +++ Sbjct: 600 EGDGGRWTILY--NEMGTITHVVDPYGGIAEYVLDPSGRIVEEIDSGGRTLRWLYDARAG 657 Query: 176 MLDRLE----------------------------SEILADRVSEESRRWLASCGLTVEQM 207 + RL+ I + + + Sbjct: 658 TIGRLDRFGNLWPNKDELPNLPNPLAHHVPNAMRGLIWGEFNVDNLTDTVLLPQEIDHWA 717 Query: 208 QNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLI 267 D G +A + G EYD NLL + Sbjct: 718 WGSATDAVARWPDERRQQRDVAGRVIARTNISGH-TERFEYDADDNLLLRFDQDGAATRY 776 Score = 48.3 bits (113), Expect = 7e-04, Method: Composition-based stats. Identities = 26/195 (13%), Positives = 50/195 (25%), Gaps = 25/195 (12%) Query: 56 YTRTQYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTI 115 YD GR V + R ++ Y +D + T Sbjct: 485 VQTDHDGNVRRTVSLRYDQSGRIVE---------VVLTDVDGRDTRIARYAYDTENCLTS 535 Query: 116 QNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQ 175 + + Y+ + + R+ A G S ++ +G + V F Sbjct: 536 YRNALDAISTYEYDAQRRMARLAGANGYSFLYCYDSEGRCVESAGQDRMWHVRFQYR--- 592 Query: 176 MLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLAL 235 + L + T+ + + + Y D G + Sbjct: 593 -----PGRTIVTEGDGGRWTILYNEMGTITHVVDPYGGIAE-------YVLDPSGRIVEE 640 Query: 236 VSTEGATEWCAEYDE 250 + + G T YD Sbjct: 641 IDSGGRTL-RWLYDA 654 Score = 43.3 bits (100), Expect = 0.019, Method: Composition-based stats. Identities = 41/259 (15%), Positives = 74/259 (28%), Gaps = 61/259 (23%) Query: 7 IARDAHYLYRYDRHGRLTEKT----------DLIPEGVIRTDDERTHRYHYDSQHRLVHY 56 +A + ++Y YDR G LT+ + D + D ++ YD HRL Sbjct: 874 LASGSKHVYEYDRFGHLTKASTDAHEITRTFDNLGRRTSDKCDGLGVQHEYDG-HRLGRT 932 Query: 57 TRTQYAEPLVESR-----------------------------------YLYDPLGRRVAK 81 T + E + Y++D +GR + Sbjct: 933 TYLERFEVVYTYTASGQSIRTPGGRTHCVQQGKDGRVLLRLANGTQACYMFDDVGRCTGR 992 Query: 82 RVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETAT 141 WR + Y + G +D + T YQ LI ++ Sbjct: 993 ITWRTDSPAAFH--------RVTYEYSGAGELRRISDNQKGDTQYQYDRAHRLIGEMSSG 1044 Query: 142 GELAKTQRRSLADTLQ-------QSGGEDGGSVVFPPVLVQMLDRLESEILADRVSEESR 194 + + + + L Q G + S SE +A + Sbjct: 1045 WQACRYEYDPAGNLLALPTCPMMQYTGGNRLSTTSRGQYTYDERNHLSEEIAHDGRRTTY 1104 Query: 195 RWLASCGLTVEQMQNQMDP 213 R+ + L + ++ D Sbjct: 1105 RYDSMDLLVRVEWSDRHDA 1123 Score = 42.5 bits (98), Expect = 0.039, Method: Composition-based stats. Identities = 29/194 (14%), Positives = 58/194 (29%), Gaps = 14/194 (7%) Query: 73 DPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQPGSFT 132 D + R +R +R+ + + +D D ++ D+ T Y S+ Sbjct: 723 DAVARWPDERRQQRDVAGRVIARTNISGHTERFEYDADDNLLLRFDQDGAATRYTRCSWN 782 Query: 133 PLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSEE 192 L E A GE + + S D + +G + + + + R Sbjct: 783 LLASEENALGETIRYRYTSRRD-VASVIDANGNESAYSYDFKKRMTSVT------RHGRL 835 Query: 193 SRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWG 252 ++ G + + ++ + GLP G+ EYD +G Sbjct: 836 RESYVYDGGDRLIEKRDGAGKWLLR------FEIGENGLPRERTLASGSK-HVYEYDRFG 888 Query: 253 NLLNEENPHQLQQL 266 +L Sbjct: 889 HLTKASTDAHEITR 902 >UniRef50_D2KTW4 Putative uncharacterized protein n=2 Tax=Streptomyces RepID=D2KTW4_9ACTO Length = 1097 Score = 179 bits (454), Expect = 2e-43, Method: Composition-based stats. Identities = 71/328 (21%), Positives = 103/328 (31%), Gaps = 32/328 (9%) Query: 10 DAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESR 69 H Y Y G +T+ +L T + D R+ + Sbjct: 707 LQHRAYTYRPDGYVTQIRELTTG---------TRGFTLDPVGRVTAVQ-----AHGWTEK 752 Query: 70 YLYDPLGRRVAKR--VWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQN----DRTRIQ 123 Y YD +G + + T +L R T Y D + + Sbjct: 753 YAYDTVGNQTHATAPDHPAAGERTCDGTLIRHAGRTRYQHDAAGRLIRKTRKLLNGRTRT 812 Query: 124 TIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESE 183 Y + L + T GE L +S RL + Sbjct: 813 WTYTWNAEDRLAKATTPDGEEWTYTYDPLGRRTAKSSQGGTALT-----FTWDAGRLAEQ 867 Query: 184 ILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATE 243 D + W S Q +P + + H D G P L++ +G Sbjct: 868 TAHDG---LTTTWDYSPDTHRPLTQVDQEP---GSTRFHTIVTDPIGTPTELITPDGHLA 921 Query: 244 WCAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEESGLYYNRHRYYDPLQGRYITQDPIGL 303 W WG L +R PGQ D E+GL YN HRYYDP +Y+T DP+GL Sbjct: 922 WQHRTTLWGTPLP-TPSDTTTCPLRFPGQYADPETGLNYNHHRYYDPETAQYLTPDPLGL 980 Query: 304 KGGWNFYQYPLNPVQYIDSMGLASKYGH 331 + Y NP + D +GL + Sbjct: 981 APAPHPRAYVHNPHTWQDPLGLEGCGDN 1008 Score = 81.0 bits (198), Expect = 9e-14, Method: Composition-based stats. Identities = 45/229 (19%), Positives = 61/229 (26%), Gaps = 30/229 (13%) Query: 4 DNRIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAE 63 I Y++D GRL KT + G R T Y ++++ RL T Sbjct: 779 GTLIRHAGRTRYQHDAAGRLIRKTRKLLNGRTR-----TWTYTWNAEDRLAKATTPDG-- 831 Query: 64 PLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLT-TIQNDRTRI 122 E Y YDPLGRR AK + WD RL +D Sbjct: 832 --EEWTYTYDPLGRRTAKSSQGGTAL--------------TFTWDAGRLAEQTAHDGLTT 875 Query: 123 QTIYQPGSFTPLIRVETATG-ELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLE 181 Y P + PL +V+ G T T + DG + Sbjct: 876 TWDYSPDTHRPLTQVDQEPGSTRFHTIVTDPIGTPTELITPDGHLAWQHRTTLWGTPLPT 935 Query: 182 SEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRG 230 ++ DP D G Sbjct: 936 PSDTTTCPLRFPGQYADPETGLNYNHHRYYDPETAQ-----YLTPDPLG 979 Score = 56.4 bits (134), Expect = 3e-06, Method: Composition-based stats. Identities = 33/287 (11%), Positives = 57/287 (19%), Gaps = 43/287 (14%) Query: 10 DAHYLYRY----------DRHGRLTEKTDLIP--EGVIRTDDERTHRYHYDSQHRLVHYT 57 A Y Y D G T+ T + T R R++ T Sbjct: 368 GATTHYTYNGSGHLSTITDALGNTTQVTTNAAGLPIAVTDPLGNTTRARRGPHGRVIAIT 427 Query: 58 RTQYAEPLVESR-----------------YLYDPLGRRVAKRVWRRERDLTGWMSLSRKP 100 + +D G + Sbjct: 428 DPLGNTTRQGWTIEGEPAWRERPDGSREVWQWDTEGNLAHHTDQAGHTTTYTHTHFDQPA 487 Query: 101 QVT-------WYGWDGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLA 153 T + +D + T + Q Y + L G +R + Sbjct: 488 TRTDPDGAHYTFTYDTELRLTEVTNPQGSQWHYTYDAAGHLTAETDFNGATRTYERDAAG 547 Query: 154 DTLQQSGGEDGGSVVFPPVLVQ------MLDRLESEILADRVSEESRRWLASCGLTVEQM 207 ++ + + D + + LT+E+ Sbjct: 548 RLTARTNALGETLRYTLDATGRVVAQHDESTGEMTTYTYDPNGTLTHASNDAAQLTLERD 607 Query: 208 QNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNL 254 T + Y D G + G YD G Sbjct: 608 PLGRILAETVNGRTATYGYDAAGNQSHRTTPSG-LTSVWTYDPTGRP 653 Score = 55.6 bits (132), Expect = 4e-06, Method: Composition-based stats. Identities = 40/243 (16%), Positives = 62/243 (25%), Gaps = 31/243 (12%) Query: 9 RDAHYLYRYDRHGRLTEKTDLIPEGVIRTDD-------------ERTHRYHYDSQHRLVH 55 A Y D GRLT +T+ + E + T D Y YD L H Sbjct: 535 NGATRTYERDAAGRLTARTNALGETLRYTLDATGRVVAQHDESTGEMTTYTYDPNGTLTH 594 Query: 56 YTRTQYAEPLVESRYLYDPLGRRVAKRVWRRERDL--------TGWMSLSRKPQVTWYGW 107 + L DPLGR +A+ V R + + S V Y Sbjct: 595 ASNDAAQLTLER-----DPLGRILAETVNGRTATYGYDAAGNQSHRTTPSGLTSVWTYDP 649 Query: 108 DGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSV 167 G + + + T L+++ Q + Sbjct: 650 TG---RPSTLTTGGHTLTFTHDAAGHETQHTTGDLTLSQSWDNVGRLATQTITASSQEHL 706 Query: 168 VFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQM--QNQMDPVYTPARKIHLYH 225 + D ++I +T Q + T + H Sbjct: 707 LQHRAYTYRPDGYVTQIRELTTGTRGFTLDPVGRVTAVQAHGWTEKYAYDTVGNQTHATA 766 Query: 226 CDH 228 DH Sbjct: 767 PDH 769 Score = 48.3 bits (113), Expect = 6e-04, Method: Composition-based stats. Identities = 40/276 (14%), Positives = 66/276 (23%), Gaps = 29/276 (10%) Query: 5 NRIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEP 64 +R YD G TE T + D + R L ++ Sbjct: 122 DRTGDGDRITITYDEQGAPTEITHSGGYRIAIDTDPQLLR-----ITTLRLLHGPEHQHS 176 Query: 65 LVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQT 124 Y Y G ++ + +D T DR Sbjct: 177 TPLISYGYSEAGDLTE--------------VINSTGLPLRFQYDDAHRITSWTDRNGTTY 222 Query: 125 IYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVV------FPPVLVQMLD 178 Y ++R G L+ + + G + + + Sbjct: 223 AYVYDHRGRVLRGIGPDGILSGRMHYNAQTRTNRYTDSLGNTTTYLCNEAYRVIAETDPL 282 Query: 179 RLESEILADRVSEESRRWLASCGLTVEQMQNQMD---PVYTPARKIHLYHCDHRGLPLAL 235 + D + G T + +D + P D RGLPL + Sbjct: 283 GNTTHTEWDANNRHPIAVTDPLGHTTRYHYDDLDRLIGIERPDGTRAEATYDDRGLPLEI 342 Query: 236 VSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRLPG 271 G W YD+ G + +P G Sbjct: 343 REPNGG-TWRHTYDDRGARTSTTDPSGATTHYTYNG 377 Score = 44.8 bits (104), Expect = 0.006, Method: Composition-based stats. Identities = 32/247 (12%), Positives = 56/247 (22%), Gaps = 58/247 (23%) Query: 13 YLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQY--------AEP 64 ++YD R+T TD + T+ Y YD + R++ Sbjct: 201 LRFQYDDAHRITSWTDR---------NGTTYAYVYDHRGRVLRGIGPDGILSGRMHYNAQ 251 Query: 65 LVESRYLYDPLGR-----------RVAKRVWRRERDLTGWMSLSRKP--------QVTWY 105 +RY D LG +A+ T W + +R P T Y Sbjct: 252 TRTNRYT-DSLGNTTTYLCNEAYRVIAETDPLGNTTHTEWDANNRHPIAVTDPLGHTTRY 310 Query: 106 GWD-GDRLTTIQNDRTRI--------------------QTIYQPGSFTPLIRVETATGEL 144 +D DRL I+ + +G Sbjct: 311 HYDDLDRLIGIERPDGTRAEATYDDRGLPLEIREPNGGTWRHTYDDRGARTSTTDPSGAT 370 Query: 145 AKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTV 204 + + V + + R + + + Sbjct: 371 THYTYNGSGHLSTITDALGNTTQVTTNAAGLPIAVTDPLGNTTRARRGPHGRVIAITDPL 430 Query: 205 EQMQNQM 211 Q Sbjct: 431 GNTTRQG 437 >UniRef50_Q2SFR5 Rhs family protein n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SFR5_HAHCH Length = 471 Score = 179 bits (454), Expect = 2e-43, Method: Composition-based stats. Identities = 54/167 (32%), Positives = 84/167 (50%), Gaps = 8/167 (4%) Query: 184 ILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATE 243 +L+++ + ++ ++ + ++++ +H DH G P + + EG Sbjct: 2 LLSEQRNHLNKVYVYEPSSFRPLA-------FIQDKQVYHFHLDHLGTPQEMTNAEGEVV 54 Query: 244 WCAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEESGLYYNRHRYYDPLQGRYITQDPIGL 303 W A Y +GNL ++ +Q +R GQ YDEE+GL+YNR RYYDP R+I QDP+GL Sbjct: 55 WSARYKAYGNLAL-KDVEDVQNPLRFQGQYYDEETGLHYNRRRYYDPSAARFINQDPVGL 113 Query: 304 KGGWNFYQYPLNPVQYIDSMGLASKYGHLNNGGYGARPNKPPTPDPS 350 GG N YQY LNP ++D GL +K G + P Sbjct: 114 LGGDNNYQYALNPTGWVDPYGLTAKPGDCPKAEAVQPTAESSLPGGQ 160 >UniRef50_C4DPW8 Rhs family protein n=1 Tax=Stackebrandtia nassauensis DSM 44728 RepID=C4DPW8_9ACTO Length = 2607 Score = 179 bits (454), Expect = 2e-43, Method: Composition-based stats. Identities = 65/394 (16%), Positives = 109/394 (27%), Gaps = 65/394 (16%) Query: 7 IARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERT----HRYHYDSQHRLVHYTRTQY- 61 + Y YD G + D + T Y YD+ +RL++ T + Sbjct: 1554 TTVLSDVEYTYDPVGNVIRARDNAQQPGGGPITGLTVSPESTYTYDAAYRLINATGRVHQ 1613 Query: 62 -----------------------AEPLVESRYL----YDPLGRRVAKRVWRRERDLTGWM 94 RY YD +G R R R M Sbjct: 1614 ALLEHDYIPGGAGTVKGTRHLSLNNGAAVERYSRTYEYDAVGNRRYMRHNGTSRTWVSDM 1673 Query: 95 SLSRKPQVT----------------WYGWDGDRLTTIQNDRTRIQTIYQPGSFTPLIRVE 138 +S + + G+ + R G+ + + +E Sbjct: 1674 WISSISNRSLPALEPSGVTVPDPEDRFDDAGNVIRLAHLRRMEWSYR---GTLSRAVVIE 1730 Query: 139 TATG--ELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSEESRRW 196 + +++ V + + I ++ + R Sbjct: 1731 RDDDPDDAEYYCYDGAGQRVRKVFTRLVSGQVETTEKIYLDGCEIKRIRSNGSTLLERLT 1790 Query: 197 LASCGLTVEQMQNQMDPVYTPAR--------KIHLYHCDHRGLPLALVSTEGATEWCAEY 248 T R ++ +H + GA EY Sbjct: 1791 SLVTDENRRVALIHRWNTDTTGRETDDVDDVRVRYPLGNHLDSAELELDEAGAVVSYEEY 1850 Query: 249 DEWGNLLNEENPHQLQ---QLIRLPGQQYDEESGLYYNRHRYYDPLQGRYITQDPIGLKG 305 +G + + R G++ D+ +GLYY HRYY GR+I+ DP+G Sbjct: 1851 FPFGGTAFVAGDSLREVRMRDYRFSGKENDDATGLYYFGHRYYAAWTGRWISADPMGPVD 1910 Query: 306 GWNFYQYP-LNPVQYIDSMGLASKYGHLNNGGYG 338 G N Y Y NPV + D GL + G + Sbjct: 1911 GTNLYVYVRNNPVTFADPNGLQTTTTETQQGEHH 1944 Score = 45.6 bits (106), Expect = 0.005, Method: Composition-based stats. Identities = 28/232 (12%), Positives = 55/232 (23%), Gaps = 22/232 (9%) Query: 26 KTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYLY-----DPLGR--- 77 E T + R+ YDS R + Y D R Sbjct: 1354 IDVYDRETHSWTPNGEHIRHQYDSLDRPTAVE----VGGRRVQEFTYGEAVPDGADRNAR 1409 Query: 78 --RVAKRVWRRERDLTGWMSLSRKPQVTW-----YGWDGDRLTTIQNDRTRIQTIYQPGS 130 V +R + + +V+ Y + D + D + Y + Sbjct: 1410 GLLVRQRDQAGTEEFDSYSPFGEVLRVSRRLASDYTTEPDWSGPVALDPETHTSAYDYDA 1469 Query: 131 FTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVS 190 + + R A + + + G V VL + E +A + Sbjct: 1470 VSRVARARLADDSVRTMTYAAGGGLTRVRVSTTDGKVTDLDVLDGVEYNARGERVAAALG 1529 Query: 191 EESRR-WLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGA 241 ++ ++ + + Y D G + Sbjct: 1530 NGVDLSYVYDPETFRTALRTATRGTTVLSDVEYTY--DPVGNVIRARDNAQQ 1579 Score = 42.5 bits (98), Expect = 0.037, Method: Composition-based stats. Identities = 24/162 (14%), Positives = 42/162 (25%), Gaps = 19/162 (11%) Query: 24 TEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHY-TRTQYAEPLVESRYLYDPLGRRVAKR 82 E + Y YD + T T+ L + Y YDP+G + R Sbjct: 1515 VEYNARGERVAAALGNGVDLSYVYDPETFRTALRTATRGTTVLSDVEYTYDPVGNVIRAR 1574 Query: 83 VWRRERDLTGWMSLSRKPQVTWYGWD-GDRLTTIQN-------------DRTRIQTIYQP 128 ++ L+ P+ T Y +D RL + Sbjct: 1575 DNAQQPGGGPITGLTVSPEST-YTYDAAYRLINATGRVHQALLEHDYIPGGAGTVKGTRH 1633 Query: 129 GSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFP 170 S VE + + ++ + + V Sbjct: 1634 LSLNNGAAVERYSR---TYEYDAVGNRRYMRHNGTSRTWVSD 1672 >UniRef50_A9BX63 YD repeat protein n=2 Tax=cellular organisms RepID=A9BX63_DELAS Length = 1390 Score = 179 bits (453), Expect = 2e-43, Method: Composition-based stats. Identities = 72/324 (22%), Positives = 115/324 (35%), Gaps = 14/324 (4%) Query: 8 ARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAE--PL 65 A Y+YD +T KT + V + Y YD+ RL + L Sbjct: 948 ANLLTLGYQYDVESSITRKTLQLGSDV-----NGSVDYAYDALDRLTQVRPSTSLTELGL 1002 Query: 66 VESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKP---QVTWYGWDGDRLTTIQNDRTRI 122 + +Y YD + R + E L ++ Y + I Sbjct: 1003 PQEQYGYDAVHNRTSSLHQPGEWQYASGNRLVQRGLGADQVRYDYSATGHIQSATRNGSI 1062 Query: 123 QTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLES 182 T + + VE A+ Q + ++ G G+ + E Sbjct: 1063 TTNL-YDAAERRVAVEQDGQVTARYQYDPFGRRISKTLGTGQGAQTTWFIYSGEGLLAEV 1121 Query: 183 EILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIH-LYHCDHRGLPLALVSTEGA 241 E L + + A G + ++ + +I+ H DH P G Sbjct: 1122 EALGKTIKSYGWQPDADWGTEPLWQADHINGQTGTSTRIYHYLHSDHLSTPQVASDAAGR 1181 Query: 242 TEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEESGLYYNRHRYYDPLQGRYITQDPI 301 + W A + +G L ++ + +R GQ +DEE+G +YN R Y P GRY+ DPI Sbjct: 1182 SSWQALNESFGQTLERSG-NRTRMNLRFAGQYFDEETGTHYNYQRDYSPGVGRYLQTDPI 1240 Query: 302 GLKGGWNFYQYP-LNPVQYIDSMG 324 G+ GG N + Y NPV+ D G Sbjct: 1241 GIDGGVNVFVYAEENPVKLNDPTG 1264 Score = 71.0 bits (172), Expect = 9e-11, Method: Composition-based stats. Identities = 52/309 (16%), Positives = 84/309 (27%), Gaps = 31/309 (10%) Query: 13 YLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYLY 72 Y YD +G TD + Y + ++ T +R+ Y Sbjct: 479 TTYAYDGNGNRKTATDA---------EGGVWSYTHTVTGQIASITNPLGH----TTRHEY 525 Query: 73 DPLGRRVAKRVWRRERDLTGWMSLSRKPQV-------TWYGWDGDRLTTIQNDRTRIQTI 125 D G R+ + +L + Q T +D + Sbjct: 526 DSHGNRIKTIYPSGLTSSARFDALGNETQSMDGEGHATVATYDSQSRLVTATNALGYVYR 585 Query: 126 YQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEIL 185 Y+ ++ ++ T TG + L S L L I Sbjct: 586 YEYNAYGDIVSQTTPTGNRHELGYDMLGRVASYKNPAGDSSQYEYGALGTPQANLLQAIN 645 Query: 186 ADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWC 245 E ++ T +++ T Y D G A+ S G T Sbjct: 646 YPGGLAELGQYDQRGRRTSTIRKSRDGESLT-----LHYSLDSAGQTAAITSPGGKTT-I 699 Query: 246 AEYDEWGNLLNEENPHQLQQLIRLP-GQQYDEESGLYYNRH-RYYDPLQGRYITQDPIGL 303 EYD G + + + Q + N H R YD GR + + Sbjct: 700 YEYDALGRVSKSIDASGHATQMAYNLLHQITRVTDANGNVHTRQYD-RLGRLTEE--MRP 756 Query: 304 KGGWNFYQY 312 +GG Y Y Sbjct: 757 EGGKTTYAY 765 Score = 69.1 bits (167), Expect = 4e-10, Method: Composition-based stats. Identities = 49/288 (17%), Positives = 80/288 (27%), Gaps = 34/288 (11%) Query: 6 RIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPL 65 R A + Y YD + + +DS+ R V Q Sbjct: 401 RHADGSEESYTYDPV--------HGETTSHTNELGIVTAWRHDSKGRAVQRIEAQGTSLE 452 Query: 66 VESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTI 125 + + YD LG+ V + + + VT Y +DG+ D Sbjct: 453 RITAWEYDELGQIVRQTLGTG-----------AQASVTTYAYDGNGNRKTATDAEGGVWS 501 Query: 126 YQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEIL 185 Y + + G + + S + ++ S L ++ E Sbjct: 502 YTHTVTGQIASITNPLGHTTRHEYDSHGNRIKTIYPSGLTSSARFDALGNETQSMDGEGH 561 Query: 186 ADRVSEESRRWLASCGLTVEQMQN-------QMDPVYTPARKIHLYHCDHRGLPLALVST 238 A + +S+ L + + + + TP H D G + + Sbjct: 562 ATVATYDSQSRLVTATNALGYVYRYEYNAYGDIVSQTTPTGNRHELGYDMLGRVASYKNP 621 Query: 239 EGATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEESGLYYNRHR 286 G EY G L Q I PG E G Y R R Sbjct: 622 AGD-SSQYEYGALGTPQAN-----LLQAINYPGG--LAELGQYDQRGR 661 Score = 55.6 bits (132), Expect = 4e-06, Method: Composition-based stats. Identities = 40/303 (13%), Positives = 70/303 (23%), Gaps = 52/303 (17%) Query: 8 ARDAHYLYRYDRHGRLTEKTDLIPEGVIRT----DDERTHRYHYDSQHRL--------VH 55 R + Y YD +G+LT +TD + + ++ L Sbjct: 240 TRGNRWTYTYDGNGQLTSRTDPLGGKITAQYSASAPAPAAQFT---LGNLGITLDPTGTS 296 Query: 56 YTRTQYAEPLV--------------ESRYLY------------DPLGRRVAKRVWRRERD 89 T + Y DP G R+ V ++D Sbjct: 297 GTTRKLQTNWGGGRVGSFSDRQGTTTGSVQYLRESRKFIATLTDPRGNRL---VVHYDKD 353 Query: 90 LTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQR 149 + WDG+ + ++R +T Y +R+ A G Sbjct: 354 GLESGRTLNDKTIRQRSWDGNYTDRLVDERGNTRTTY-WDYNRRPLRIRHADGSEESYTY 412 Query: 150 RSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQN 209 + E G + ++ E W + + Sbjct: 413 DPVHGETTSHTNELGIVTAWRHDSK--GRAVQRIEAQGTSLERITAWEYDELGQIVRQTL 470 Query: 210 QMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRL 269 + Y D G EG W + G + + NP Sbjct: 471 GTGAQASVTT----YAYDGNGNRKTATDAEGG-VWSYTHTVTGQIASITNPLGHTTRHEY 525 Query: 270 PGQ 272 Sbjct: 526 DSH 528 Score = 55.2 bits (131), Expect = 6e-06, Method: Composition-based stats. Identities = 29/224 (12%), Positives = 53/224 (23%), Gaps = 20/224 (8%) Query: 6 RIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPL 65 R Y D G+ T +T Y YD+ R+ Sbjct: 670 RDGESLTLHYSLDSAGQTAAITS---------PGGKTTIYEYDALGRVSKSIDASGH--- 717 Query: 66 VESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQV-------TWYGWDGDRLTTIQND 118 ++ Y+ L + + L R + T Y +D + + Sbjct: 718 -ATQMAYNLLHQITRVTDANGNVHTRQYDRLGRLTEEMRPEGGKTTYAYDAAGFLVKKTN 776 Query: 119 RTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLD 178 + Y S L + + + K S G G + Sbjct: 777 AAGDVSSYTYNSDGLLTLLTRTSPQAGKPGWSSSITYRYDKAGRLAGYEQKDGSGKLISQ 836 Query: 179 RLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIH 222 S R+S+E + + D + + Sbjct: 837 ADYSRDALGRISQEQLIYGDGANRITATLAQGWDADGRKTSQGY 880 Score = 53.3 bits (126), Expect = 2e-05, Method: Composition-based stats. Identities = 59/467 (12%), Positives = 116/467 (24%), Gaps = 49/467 (10%) Query: 17 YDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQ---------HRLVHYTRTQYAEPLVE 67 YDR G + + R+ YDS +L + Sbjct: 154 YDRRGNTIDYDAQGRIQGYTDFNGIQVRFSYDSASSIRILDHHGQL---ALRLNLADGIV 210 Query: 68 SRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQND--RTRIQTI 125 + D G V L + Y +DG+ T + D +I Sbjct: 211 TSIE-DRSGNIVRYTWAGSGITRRLTEVLDTRGNRWTYTYDGNGQLTSRTDPLGGKITAQ 269 Query: 126 YQPGSFTPLIRVE----------TATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQ 175 Y + P + T T + + + S + G+ ++ Sbjct: 270 YSASAPAPAAQFTLGNLGITLDPTGTSGTTRKLQTNWGGGRVGSFSDRQGTTTGSVQYLR 329 Query: 176 MLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLAL 235 + + + R + + + + ++ + D RG Sbjct: 330 ESRKFIATLTDPRGNRLVVHYDKDGLESGRTLNDKTIRQRSWDGNYTDRLVDERGNTRTT 389 Query: 236 VS-----------TEGATEWCAEYDE-WGNLLNEENPHQLQQLIRLPGQ------QYDEE 277 +G+ YD G + N + R + + Sbjct: 390 YWDYNRRPLRIRHADGSE-ESYTYDPVHGETTSHTNELGIVTAWRHDSKGRAVQRIEAQG 448 Query: 278 SGLYYNRHRYYDPLQGRYITQDP-IGLKGGWNFYQYPLNPV--QYIDSMGLASKYGHLNN 334 + L YD G+ + Q G + Y Y N D+ G Y H Sbjct: 449 TSLERITAWEYD-ELGQIVRQTLGTGAQASVTTYAYDGNGNRKTATDAEGGVWSYTHTVT 507 Query: 335 GGYGARPNKPPTPDPSKLPDIAKQLRLPYPID-QASSAPNVFKTFFRALSPYDYTLYCRK 393 G + N + +++ YP +S+ + +++ + Sbjct: 508 GQIASITNPLGHTTRHEYDSHGNRIKTIYPSGLTSSARFDALGNETQSMDGEGHATVATY 567 Query: 394 WVKPNLTCTPQDDSQYPGMDTKTASDYLPQTNWPTTQLPPGYTCAEP 440 + L + D + QT + GY Sbjct: 568 DSQSRLVTATNALGYVYRYEYNAYGDIVSQTTPTGNRHELGYDMLGR 614 >UniRef50_UPI0001B52595 rhsE element core protein RshE n=1 Tax=Escherichia sp. 4_1_40B RepID=UPI0001B52595 Length = 273 Score = 179 bits (453), Expect = 3e-43, Method: Composition-based stats. Identities = 100/158 (63%), Positives = 115/158 (72%) Query: 203 TVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQ 262 TVEQ+ Q++P YTPARK+H YHCDHRGLPLAL+S +G T W EYDEWGN LNEENPH Sbjct: 2 TVEQLARQVEPEYTPARKVHFYHCDHRGLPLALISEDGNTAWRGEYDEWGNQLNEENPHH 61 Query: 263 LQQLIRLPGQQYDEESGLYYNRHRYYDPLQGRYITQDPIGLKGGWNFYQYPLNPVQYIDS 322 L Q RLPGQQ+DEESGLYYNRHR+YDPLQGRYIT DPIGL+GGWN YQYPLNP+Q ID Sbjct: 62 LHQPYRLPGQQHDEESGLYYNRHRHYDPLQGRYITPDPIGLRGGWNMYQYPLNPIQVIDP 121 Query: 323 MGLASKYGHLNNGGYGARPNKPPTPDPSKLPDIAKQLR 360 MGL + + G A P + + + A Q Sbjct: 122 MGLDAIENMTSGGLIYAVSGVPGLIAANSITNSAYQFG 159 >UniRef50_Q3KHR5 Putative insecticidal toxin n=2 Tax=Pseudomonas fluorescens Pf0-1 RepID=Q3KHR5_PSEPF Length = 942 Score = 178 bits (452), Expect = 3e-43, Method: Composition-based stats. Identities = 61/350 (17%), Positives = 105/350 (30%), Gaps = 41/350 (11%) Query: 8 ARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDER--THRYHYDSQHRLVHYTRTQYAE-- 63 H +Y YD G + D + R+ YDS +RL + Sbjct: 306 GVLQHLMYGYDSTGNVLSIEDRALPTRYFANQRIEPVSRFFYDSLYRLTKACGWEAGTAS 365 Query: 64 --------------PLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQV------- 102 + Y YD G + S + Sbjct: 366 QGPQSMGRVDPAAISNYQQTYKYDADGNLCELIHLGPQDHGRKLRPASYSNRSLPYKVTP 425 Query: 103 -------TWYGWDGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADT 155 Y G+ L Q S +P+ RV + Sbjct: 426 PTDAQIEAAYDRRGNLLQLEPGWLLSWNLRNQLQSVSPVERVSGINDSE-TYLYDGSSQR 484 Query: 156 LQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVY 215 +++ + + + E+ D + E + + + G+ V ++ + P + Sbjct: 485 VRKIRSLLTNARTLVADVRYLPGL---ELRTDNGTGERLQVITADGIRV--LRWESPPPW 539 Query: 216 TPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQYD 275 + H DH G + +GA + +G ++ + IR G++ D Sbjct: 540 GVNIQYRYQHVDHLGSVSLETADDGAMISRETFHPFGTSAWQDG-EFSYKYIRYSGKERD 598 Query: 276 EESGLYYNRHRYYDPLQGRYITQDPIGLKGGWNFYQYPLN-PVQYIDSMG 324 +GL Y RYY P ++ DP G+ G N Y N PV + DS G Sbjct: 599 A-TGLDYFDLRYYIPWLQHWLNPDPKGMIDGLNLYCMVANSPVTFFDSDG 647 >UniRef50_A9EZF2 Conserved carbohydrate-binding protein, Rhs family n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=A9EZF2_SORC5 Length = 1352 Score = 178 bits (451), Expect = 4e-43, Method: Composition-based stats. Identities = 68/326 (20%), Positives = 111/326 (34%), Gaps = 37/326 (11%) Query: 12 HYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYL 71 LY YD G L E+ D RY YD L+ + P + Sbjct: 872 DRLYAYDAAGALVERNDRRWGIS---------RYSYDRLGMLLAAS-----SPKGRETFE 917 Query: 72 YDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDG-DRLTTIQNDRTRIQTIYQPGS 130 YD G TG L + + Y +D +R T + + Sbjct: 918 YDVGGSL----KPAGSAWETGPGGLLLRTEKAAYAYDAANRRTRETRSDGATEYL--WDC 971 Query: 131 FTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFP------PVLVQMLDRLESEI 184 L V G + + +++ F P +V+ + Sbjct: 972 RGQLREVRRPDGTRVLFAYDAFSRRVRKEIVPPAVPSAFDSADARKPRVVEYVWDGLCLA 1031 Query: 185 LADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEW 244 +R ++ G +Q + I+ DH G L+ EG W Sbjct: 1032 AEIDSERGTRVFVHEPGTMSPLLQ-------QDSTAIYAVVTDHVGTTTELIGPEGEVAW 1084 Query: 245 CAEYDEWGNLLNEENPHQ---LQQLIRLPGQQYDEESGLYYNRHRYYDPLQGRYITQDPI 301 A + +G + P + RL GQ +DEE+ L Y R+RY+DP R+++ DP+ Sbjct: 1085 SAHHSAFGIITEAARPKGGPLVASPFRLLGQYHDEETELCYVRYRYFDPKTARFLSPDPL 1144 Query: 302 GLKGGWNFYQYPLNPVQYIDSMGLAS 327 L G N + + +P + D +GL+ Sbjct: 1145 ELFGSRNLFAFDGSPTTHADPLGLSC 1170 Score = 69.8 bits (169), Expect = 2e-10, Method: Composition-based stats. Identities = 33/148 (22%), Positives = 54/148 (36%), Gaps = 15/148 (10%) Query: 3 PDNRIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYA 62 P + R Y YD R T +T Y +D + +L R Sbjct: 935 PGGLLLRTEKAAYAYDAANRRTRETRSDGATE----------YLWDCRGQLREVRRPDGT 984 Query: 63 EPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRI 122 L + YD RRV K + + +RKP+V Y WDG L + Sbjct: 985 RVL----FAYDAFSRRVRKEIVPPAVPSAFDSADARKPRVVEYVWDGLCLAAEIDSERGT 1040 Query: 123 Q-TIYQPGSFTPLIRVETATGELAKTQR 149 + +++PG+ +PL++ ++ T Sbjct: 1041 RVFVHEPGTMSPLLQQDSTAIYAVVTDH 1068 Score = 62.9 bits (151), Expect = 2e-08, Method: Composition-based stats. Identities = 43/249 (17%), Positives = 64/249 (25%), Gaps = 33/249 (13%) Query: 12 HYLYRYDRHGRLTEKTDLIPEGVI----------RTDDERTHRYHYDSQHRLVHYTRTQY 61 + D G LT TD I V R T Y YD ++RL T Sbjct: 471 TLTFTRDGRGNLTRITDSIGRVVELEYSDDLLVRRHAGGLTTEYGYDHRNRLTWVRYTSG 530 Query: 62 AEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTR 121 A + YD GR A R + +D + Sbjct: 531 AFLTL----TYDEQGRLAAVHGPDGLRGG--------------FTYDEQHNAAEERTPRD 572 Query: 122 IQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLE 181 ++ + I G + + + +L DG S+ F L RL Sbjct: 573 GLRRWRHDALGRPIVYVDPLGRVTRRELDALG-RPTALHLPDGTSLRFEHDA---LGRLT 628 Query: 182 SEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLAL-VSTEG 240 E R + V Q + + + + +G L G Sbjct: 629 RRTDTLGRVETFRYTGLKSPVEVTQPDGAIWSLSFDLNERLQQVKNPKGETFDLRYDRAG 688 Query: 241 ATEWCAEYD 249 YD Sbjct: 689 NLREYRSYD 697 Score = 59.4 bits (142), Expect = 3e-07, Method: Composition-based stats. Identities = 36/270 (13%), Positives = 76/270 (28%), Gaps = 28/270 (10%) Query: 6 RIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPL 65 R RD +R+D GR D + R D+ R Sbjct: 568 RTPRDGLRRWRHDALGRPIVYVDPLGRVTRREL---------DALGRPTALHLPDGTS-- 616 Query: 66 VESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYG-------WDGDRLTTIQND 118 R+ +D LGR + + + L +VT +D + + Sbjct: 617 --LRFEHDALGRLTRRTDTLGRVETFRYTGLKSPVEVTQPDGAIWSLSFDLNERLQQVKN 674 Query: 119 RTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLD 178 + L + G +++ Q + + + ++L Sbjct: 675 PKGETFDLRYDRAGNLREYRSYDGRISRAQHGKNGRLARVDHADGTFRALRHDGAGRILA 734 Query: 179 RLE--SEILADRVSEESRRWLASCGLTVEQMQNQMDPVY-----TPARKIHLYHCDHRGL 231 + + + ++ +++ + DP+ T ++ Y D + Sbjct: 735 EETPHGVVKIETPEDLVVEYIFEDPAGEIRLRVERDPLGRVVAETQNGRMIRYEYDAQNR 794 Query: 232 PLALVSTEGATEWCAEYDEWGNLLNEENPH 261 A G YDE GN+ + ++ Sbjct: 795 CTARHLPTGHIT-RYTYDEEGNVSSLDHDG 823 Score = 59.1 bits (141), Expect = 3e-07, Method: Composition-based stats. Identities = 45/308 (14%), Positives = 76/308 (24%), Gaps = 54/308 (17%) Query: 6 RIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPL 65 R A Y YD RLT +R YD Q RL Sbjct: 505 RHAGGLTTEYGYDHRNRLT---------WVRYTSGAFLTLTYDEQGRLAAVHGPDGLRGG 555 Query: 66 VESRYLYDPLGR-------RVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQND 118 + YD R R WR + + + +VT D T + Sbjct: 556 ----FTYDEQHNAAEERTPRDGLRRWRHDALGRPIVYVDPLGRVTRRELDALGRPTALHL 611 Query: 119 RTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQM-- 176 ++ + L R G + + L ++ + + + + ++ Sbjct: 612 PDGTSLRFEHDALGRLTRRTDTLGRVETFRYTGLKSPVEVTQPDGAIWSLSFDLNERLQQ 671 Query: 177 -----LDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRG- 230 + + E R + ++ V D G Sbjct: 672 VKNPKGETFDLRYDRAGNLREYRSYDGRISRAQHGKNGRLARVDHADGTFRALRHDGAGR 731 Query: 231 --------------LPLALV------STEGATEWCAEYDEWGNLLNEENPHQLQQLIRLP 270 P LV G E D G ++ E Q R+ Sbjct: 732 ILAEETPHGVVKIETPEDLVVEYIFEDPAGEIRLRVERDPLGRVVAET------QNGRMI 785 Query: 271 GQQYDEES 278 +YD ++ Sbjct: 786 RYEYDAQN 793 Score = 56.4 bits (134), Expect = 2e-06, Method: Composition-based stats. Identities = 66/403 (16%), Positives = 98/403 (24%), Gaps = 77/403 (19%) Query: 13 YLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYLY 72 + Y G L + TD + Y YD Q R+ H T Y+Y Sbjct: 343 VSFAYSDGGELVKVTDAL---------GHAETYGYDEQRRMNHRTLPTGLS----FHYVY 389 Query: 73 DP-LGRRVAKRVWRRERDLT-------GWMSLSRKPQVTWYGW----------------- 107 DP GR V G L+ P+ + W Sbjct: 390 DPESGRCVRSWGDGDLHAGDLTYDLQQGITHLTGNPEPRVFTWRPEDGSVVREASPDGLS 449 Query: 108 ------DGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGG 161 D D L + + L R+ + G + + + +++ G Sbjct: 450 VRDLEFDADGLLLKTKNAAGDTLTFTRDGRGNLTRITDSIGRVVELEYSDDL-LVRRHAG 508 Query: 162 EDGGSVVFPPVLVQMLDRLESEILADRVSEESRRWLA-------SCGLTVEQMQNQMDPV 214 + R S +E R A G T ++ N + Sbjct: 509 GLTTEYGYDHRNRLTWVRYTSGAFLTLTYDEQGRLAAVHGPDGLRGGFTYDEQHNAAEER 568 Query: 215 YTPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQY 274 H D G P+ V G E D G P ++ Sbjct: 569 TPRDGLRRWRH-DALGRPIVYVDPLGRVT-RRELDALGRPTALHLPDGTSLRF-----EH 621 Query: 275 DEESGLYYNRHRYYDPLQGRYITQ-DPIGLKGGWNFYQYPLNPVQYIDSMGLASKYGHLN 333 D GR + D +G + Y +PV+ G Sbjct: 622 DA---------------LGRLTRRTDTLGRVETF-RYTGLKSPVEVTQPDGAIWSLSFDL 665 Query: 334 NGGYGARPNKPPTPDPSKLPDIAKQLRLPYPIDQASSAPNVFK 376 N + P D A LR D S K Sbjct: 666 NERL-QQVKNPKGETFDLRYDRAGNLREYRSYDGRISRAQHGK 707 Score = 55.2 bits (131), Expect = 5e-06, Method: Composition-based stats. Identities = 40/258 (15%), Positives = 69/258 (26%), Gaps = 28/258 (10%) Query: 7 IARDAHYLYRYDRHGRLTEKTDLIPEGVIRT------------DDERTHRYHYDSQHRLV 54 + + +D GRLT +TD + D +D RL Sbjct: 611 LPDGTSLRFEHDALGRLTRRTDTLGRVETFRYTGLKSPVEVTQPDGAIWSLSFDLNERLQ 670 Query: 55 HYTRTQYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTT 114 + + YD G R + R +V DG Sbjct: 671 QVKNPKGETFDL----RYDRAGNLREYRSYDGRISRAQHGKNGRLARVDH--ADGTFRAL 724 Query: 115 IQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDG-GSVVFPPVL 173 + RI P ++++ET + + A ++ D G VV Sbjct: 725 RHDGAGRILAEETPHG---VVKIETPEDLVVEYIFEDPAGEIRLRVERDPLGRVVAETQN 781 Query: 174 VQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHL-YHCDHRGLP 232 +M+ D + + R L + +T + + + D G Sbjct: 782 GRMI-----RYEYDAQNRCTARHLPTGHITRYTYDEEGNVSSLDHDGYRVEIQRDLAGSV 836 Query: 233 LALVSTEGATEWCAEYDE 250 + V E E D Sbjct: 837 VRKVFASAGVEARREVDP 854 >UniRef50_Q3BS17 Rhs family protein n=18 Tax=Xanthomonas RepID=Q3BS17_XANC5 Length = 1545 Score = 178 bits (451), Expect = 4e-43, Method: Composition-based stats. Identities = 71/334 (21%), Positives = 112/334 (33%), Gaps = 37/334 (11%) Query: 12 HYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYL 71 + +D G LT T YD+ RL T V Y Sbjct: 1099 DVGFGFDPAGNLTALTPAGNPAPEIG-------LGYDALGRLTGLT--DGVTGTVIDGYS 1149 Query: 72 YDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWY--GWDGDRLTTIQNDRTRIQTIYQPG 129 YD G R++ +V + + R + +D TT R Y Sbjct: 1150 YDATGNRLSAKVGTTTQIYSYPTDSHRLSAMAGVARTYDATGNTTAIGGTARQ---YTYD 1206 Query: 130 SFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRV 189 + + + A + + L++ G +F + D ++ Sbjct: 1207 TTGRMTQARRAGAVTMNYRYNGKGEQLRRFLGTTNTYTLFDEAGHWLGD-----YDSNGA 1261 Query: 190 SEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGAT---EWCA 246 ++ WL + + A K+H DH G P ++ W Sbjct: 1262 PKQQAIWLDDLPV----------GLLANANKLHYIEPDHLGSPRVVIDPTRDVAVWTWSL 1311 Query: 247 EYDEWGNLLNEENPH----QLQQLIRLPGQQYDEESGLYYNRHRYYDPLQGRYITQDPIG 302 + + +GN ++P L +R PGQ++D SGL N R Y+ GRY+ DPIG Sbjct: 1312 KGEAFGNTAPNQDPDGDGAALVLDMRFPGQRFDAASGLNQNYFRDYEAATGRYVQSDPIG 1371 Query: 303 LKGGWNFYQYP-LNPVQYIDSMGLASKYGHLNNG 335 L GG Y Y +P+ D GL S N+ Sbjct: 1372 LSGGITTYSYTEGSPLSKSDPFGLMSFGKSCNSA 1405 Score = 81.4 bits (199), Expect = 6e-14, Method: Composition-based stats. Identities = 46/302 (15%), Positives = 81/302 (26%), Gaps = 44/302 (14%) Query: 2 WPDNRIARDAH-----YLYRYDRHGRLTEKTDLIPEGVIRTDDE---------------- 40 WP + + + YD RLT+ TD V T D Sbjct: 738 WPTGLVRQVTQPDGAFTAFTYDAAHRLTDITDNAGNTVHYTLDNAGNRVKEDTKDAAGTL 797 Query: 41 -RTHRYHYDSQHRLVHYTRTQYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRK 99 RT Y+ +L +TQ + + YD G + + L+R Sbjct: 798 KRTLSRVYNQLGQL----KTQATAASDPTDFAYDANGNATTVTDALATATQSEYDPLNRL 853 Query: 100 PQV----------TWYGWDGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQR 149 + T + +D T D + T Y F L+++ + + Sbjct: 854 SRTLQDVAGIKADTKFEYDALDNLTKVTDPKGLDTTYDYNGFGELVKLTSPDTGVTSYTY 913 Query: 150 RSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSEESRRWLASCG--LTVEQM 207 S + Q+ + L+RL + + + + E Sbjct: 914 DSAGNRATQTDARGNTTAYSYDA----LNRLTKVTHPTTSLNVTYTYDVTQTACASGETF 969 Query: 208 QNQMDPVYTPARKIHLYHCDHRGL-PLALVSTEG-ATEWCAEYDEWGNLLNEENPHQLQQ 265 I Y + G + ++ G A +Y G L P+ Sbjct: 970 SIGRLTKMQDGGAITQYCYNRFGDLVRKVQTSNGTALVLRYDYTVGGQLRRMTYPNGAVV 1029 Query: 266 LI 267 Sbjct: 1030 DY 1031 Score = 42.5 bits (98), Expect = 0.038, Method: Composition-based stats. Identities = 20/107 (18%), Positives = 31/107 (28%), Gaps = 21/107 (19%) Query: 5 NRIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEP 64 +R++ A YD G T +Y YD+ R+ R Sbjct: 1175 HRLSAMAGVARTYDATGNTTAI------------GGTARQYTYDTTGRMTQARR----AG 1218 Query: 65 LVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDR 111 V Y Y+ G RR T +L + +D + Sbjct: 1219 AVTMNYRYNGKG-----EQLRRFLGTTNTYTLFDEAGHWLGDYDSNG 1260 >UniRef50_O85157 Insecticidal toxin complex protein TccC n=15 Tax=Proteobacteria RepID=O85157_PHOLU Length = 1043 Score = 178 bits (450), Expect = 5e-43, Method: Composition-based stats. Identities = 62/373 (16%), Positives = 111/373 (29%), Gaps = 47/373 (12%) Query: 8 ARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDER--THRYHYDSQHRLVHYTRTQYAEPL 65 Y+YD G + + + + +RY YDS ++L+ T + A Sbjct: 320 RVLQDLRYKYDPVGNVISIHNDAEATRFWRNQKVEPENRYVYDSLYQLMSATGREMANIG 379 Query: 66 VES----------------------RYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVT 103 +S Y YD G V R + ++ + Sbjct: 380 QQSNQLPSPVIPVPTDDSTYTNYLRTYTYDRGGNLVQIRHSSPATQNSYTTDITVSSRSN 439 Query: 104 W----------------YGWDGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKT 147 + G + I + TP+ R ++ E + Sbjct: 440 RAVLSTLTTDPTRVDALFDSGGHQKMLIPGQNLDWNIRGELQRVTPVSRENSSDSEWYRY 499 Query: 148 QRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQM 207 + + V + L+ + + + + G ++ Sbjct: 500 SSDGMRLLKVSEQQTGNSTQVQRVTYLPGLELRTTGVADKTTEDLQVITVGEAGRAQVRV 559 Query: 208 --QNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNL---LNEENPHQ 262 P ++ + + G + +EG EY +G Sbjct: 560 LHWESGKPTDIDNNQVRYSYDNLLGSSQLELDSEGQILSQEEYYPYGGTAIWAARNQTEA 619 Query: 263 LQQLIRLPGQQYDEESGLYYNRHRYYDPLQGRYITQDPIGLKGGWNFYQYP-LNPVQYID 321 + IR G++ D +GLYY +RYY P GR+++ DP G G N Y+ NP+ D Sbjct: 620 SYKFIRYSGKERDA-TGLYYYGYRYYQPWVGRWLSADPAGTVDGLNLYRMVRNNPITLTD 678 Query: 322 SMGLASKYGHLNN 334 GLA N Sbjct: 679 HDGLAPSPNRNRN 691 Score = 41.7 bits (96), Expect = 0.060, Method: Composition-based stats. Identities = 25/168 (14%), Positives = 52/168 (30%), Gaps = 14/168 (8%) Query: 38 DDERTHRYHYDSQ-HRLVHYTRTQ------YAEPLVESRYLYDPLGRRVAKRVWRRERDL 90 + Y Y+ + RL+ T + A L + RY YDP+G ++ + + Sbjct: 288 GNGVVTEYSYEPETQRLIGITTRRAEGSQSGARVLQDLRYKYDPVGNVIS---IHNDAEA 344 Query: 91 TGWMSLSRKPQVTWYGWDGDRLTTIQND----RTRIQTIYQPGSFTPLIRVETATGELAK 146 T + + Y +D Q+ P P+ ++ + Sbjct: 345 TRFWRNQKVEPENRYVYDSLYQLMSATGREMANIGQQSNQLPSPVIPVPTDDSTYTNYLR 404 Query: 147 TQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSEESR 194 T L Q + + + R +L+ ++ +R Sbjct: 405 TYTYDRGGNLVQIRHSSPATQNSYTTDITVSSRSNRAVLSTLTTDPTR 452 >UniRef50_D2UF28 Putative rhs family protein n=2 Tax=Xanthomonas albilineans RepID=D2UF28_XANAL Length = 1812 Score = 178 bits (450), Expect = 5e-43, Method: Composition-based stats. Identities = 63/338 (18%), Positives = 101/338 (29%), Gaps = 52/338 (15%) Query: 4 DNRIARDA----HYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVH-YTR 58 NR+ + + YD R + T ++ Y Y+ +++ Sbjct: 1343 GNRLTGISQGSDTVSFAYDSANRPSSMT---------LPNQVQTVYVYNDANQVTGLAWG 1393 Query: 59 TQYAEPLVESRYLYDPLGRRVAKRVWRRER---DLTGWMSLSRKPQVTW-------YGWD 108 L Y YD G VA+ + + + T Y D Sbjct: 1394 KAGQTALGSLGYGYDSRGLLVAQTGSHAPQALPTASTNNVFDDNNRQTQANGVAMSYDAD 1453 Query: 109 GDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVV 168 G L T Y L ++ +A +L ++ + Sbjct: 1454 GHLL-------TDGTRTYTWDDRDHLSQISQGGTVIASYSYDALGRRTAKTESGATTQYL 1506 Query: 169 FPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDH 228 + + + +R+ + D Sbjct: 1507 YDGRNTVQETQGATINPILTGLGIDQRYARDD-----------------NGGRTYFLTDG 1549 Query: 229 RGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEESGLYYNRHRYY 288 G L T G +YD +G ++ + G++ D SGLYY R RYY Sbjct: 1550 LGSTRLLTDTNGNAVQRYDYDPYGTTT--QSSASYNNPYQYTGRERDA-SGLYYYRARYY 1606 Query: 289 DPLQGRYITQDPIGLKGGWNFYQYP-LNPVQYIDSMGL 325 P R+I++DPI L GG N Y Y NPV Y D +G Sbjct: 1607 TPELARFISEDPIKLAGGVNTYAYTGGNPVMYRDPVGH 1644 Score = 76.8 bits (187), Expect = 2e-12, Method: Composition-based stats. Identities = 49/333 (14%), Positives = 82/333 (24%), Gaps = 81/333 (24%) Query: 7 IARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDD------------ERTHRYHYDSQ---- 50 + A Y YD R +TD + + T D RT Y YD+ Sbjct: 1204 LPNGAGVTYAYDALNRRISRTDALGQAESWTYDSMGRVASHTDRRNRTTTYSYDALGRPS 1263 Query: 51 ------------------HRLVHYTRT----------------QYAEPLVESRYLYDPLG 76 +RLV + + Q P Y YD +G Sbjct: 1264 TATLPGAGGTLSASYDAGNRLVALSDSLSGTLSWSYDGFDQVTQANGPQGNILYGYDAVG 1323 Query: 77 RRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQPGSFTPLIR 136 RR + + + + + + DG+RLT I + + S Sbjct: 1324 RRTSMQAAGQAQVIYAYD-------------DGNRLTGISQGSDTVS--FAYDSANRPSS 1368 Query: 137 VETATGELAKTQRRSLADTLQQSGGEDGGSVV----FPPVLVQMLDRLESEILADRVSEE 192 + + G+ G + + + +L + Sbjct: 1369 MTLPNQVQTVYVYNDANQVTGLAWGKAGQTALGSLGYGYDSRGLLVAQTGSHAPQALPTA 1428 Query: 193 SRRWLASCGLTVEQ-----MQNQMDPVYTPARKIHLY--HCDHRGLPLALVSTEGATEWC 245 S + Q M D DH + +S G Sbjct: 1429 STNNVFDDNNRQTQANGVAMSYDADGHLLTDGTRTYTWDDRDHL----SQISQGGTVIAS 1484 Query: 246 AEYDEWGNLLNEENPHQLQQLIRLPGQQYDEES 278 YD G + Q G+ +E+ Sbjct: 1485 YSYDALGRRTAKTESGATTQ-YLYDGRNTVQET 1516 Score = 68.7 bits (166), Expect = 4e-10, Method: Composition-based stats. Identities = 29/221 (13%), Positives = 51/221 (23%), Gaps = 23/221 (10%) Query: 10 DAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESR 69 RYD GRL D R+ YD+ R Sbjct: 1144 GRQTQLRYDALGRLIGVQDA---------QGNVSRFEYDALGRQTKAVDPLGNSVST--- 1191 Query: 70 YLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVT-------WYGWDGDRLTTIQNDRTRI 122 +D G A + + +L+R+ T + +D DR Sbjct: 1192 -GFDANGNVSAILLPNGAGVTYAYDALNRRISRTDALGQAESWTYDSMGRVASHTDRRNR 1250 Query: 123 QTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLE- 181 T Y + + + L G++ + + + Sbjct: 1251 TTTYSYDALGRPSTATLPGAGGTLSASYDAGNRLVALSDSLSGTLSWSYDGFDQVTQANG 1310 Query: 182 --SEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARK 220 IL + R + + G T + Sbjct: 1311 PQGNILYGYDAVGRRTSMQAAGQAQVIYAYDDGNRLTGISQ 1351 Score = 67.1 bits (162), Expect = 2e-09, Method: Composition-based stats. Identities = 28/201 (13%), Positives = 52/201 (25%), Gaps = 34/201 (16%) Query: 5 NRIARDAHY-----LYRYDRHGRLTEKTDLIPEGVIR------------TDDERTHRYHY 47 R+ + YD GR T+ D + V + Y Y Sbjct: 1155 GRLIGVQDAQGNVSRFEYDALGRQTKAVDPLGNSVSTGFDANGNVSAILLPNGAGVTYAY 1214 Query: 48 DSQHRLVHYTRTQYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVT---- 103 D+ +R + T + YD +GR + R + +L R T Sbjct: 1215 DALNRRISRTDALG----QAESWTYDSMGRVASHTDRRNRTTTYSYDALGRPSTATLPGA 1270 Query: 104 ------WYGWDGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQ 157 Y G+RL + D + F + + G + ++ Sbjct: 1271 GGTLSASYDA-GNRLVALS-DSLSGTLSWSYDGFDQVTQANGPQGNIL-YGYDAVGRRTS 1327 Query: 158 QSGGEDGGSVVFPPVLVQMLD 178 + ++ Sbjct: 1328 MQAAGQAQVIYAYDDGNRLTG 1348 Score = 56.7 bits (135), Expect = 2e-06, Method: Composition-based stats. Identities = 37/264 (14%), Positives = 62/264 (23%), Gaps = 43/264 (16%) Query: 10 DAHYLYRYDRHGRLTEKTDLIPEGVIRTDD----------------ERTHRYHYDSQHR- 52 Y YD GR + T L RT RT + Y +R Sbjct: 1037 GRRTEYAYDSAGRPLQITQLAGTAQARTTTVSYTGDGDLAAITDALGRTTSFAY--TNRC 1094 Query: 53 LVHYTRTQYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMS------LSRKPQVTWYG 106 L T + G+R++ W + + T Sbjct: 1095 LTSVTTPLGQTSTATC----NGAGQRLSVTDPLGHTSNFTWSNDDLTAITDALGRQTQLR 1150 Query: 107 WDGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGS 166 +D D + ++ + + G T + + + +G Sbjct: 1151 YDALGRLIGVQDAQGNVSRFEYDALGRQTKAVDPLGNSVSTGFDANGN-VSAILLPNGAG 1209 Query: 167 VVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHC 226 V + D L I ++ W V ++ + Y Sbjct: 1210 VTYAY------DALNRRISRTDALGQAESWTYDSMGRVASHTDRR-------NRTTTYSY 1256 Query: 227 DHRGLPLALVSTEGATEWCAEYDE 250 D G P A YD Sbjct: 1257 DALGRPSTATLPGAGGTLSASYDA 1280 Score = 56.4 bits (134), Expect = 3e-06, Method: Composition-based stats. Identities = 34/212 (16%), Positives = 56/212 (26%), Gaps = 37/212 (17%) Query: 3 PDNRIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYA 62 D + D Y +D L++ + Y YD+ R T Sbjct: 1452 ADGHLLTDGTRTYTWDDRDHLSQIS---------QGGTVIASYSYDALGRRTAKT----- 1497 Query: 63 EPLVESRYLYDPLGRRVAKRVWRRERDLT-------GWMSLSRKPQVTWYGWDGD---RL 112 E ++YLYD GR + + + T++ DG RL Sbjct: 1498 ESGATTQYLYD--GRNTVQETQGATINPILTGLGIDQRYARDDNGGRTYFLTDGLGSTRL 1555 Query: 113 TTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPV 172 T N + Y P T + + + G Sbjct: 1556 LTDTNGNAVQRYDYDP----------YGTTTQSSASYNNPYQYTGRERDASGLYYYRARY 1605 Query: 173 LVQMLDRLESEILADRVSEESRRWLASCGLTV 204 L R SE +++ + + G V Sbjct: 1606 YTPELARFISE-DPIKLAGGVNTYAYTGGNPV 1636 Score = 49.4 bits (116), Expect = 3e-04, Method: Composition-based stats. Identities = 55/467 (11%), Positives = 115/467 (24%), Gaps = 70/467 (14%) Query: 16 RYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYLYDPL 75 YD + R+ +D + T Y Y+ L TR + Y Y Sbjct: 873 GYDSNNRINTLSDPLGN---------TWSYAYNDDGYLSQVTRPDGS----TRSYHY--- 916 Query: 76 GRRVAKRVWRRERDLTGWMSLSRKPQVTWY--------GWDGDRLTTIQNDRTRIQTIYQ 127 ++ + K Q + W G + Q D + Y Sbjct: 917 --KIRQATDTLPYQARLESIADSKQQRVVFNEFESANGTWTGRVVKQTQADGGVLTINYA 974 Query: 128 PGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILAD 187 + T + S G+ + + + ++ D Sbjct: 975 HVDGGTTGVLVTKPDGSQRRVVFDPVSHYPSSDTLAYGTPLAQTITYERTASGQTTARTD 1034 Query: 188 RVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWCAE 247 + + S G ++ Q + G A+ G T A Sbjct: 1035 ALGRRTEYAYDSAGRPLQITQLAGTAQARTTTVSYT----GDGDLAAITDALGRTTSFAY 1090 Query: 248 YDEWGNLLNEENPHQLQQLIRLPGQQYDEESGLYYNRHRYYDPLQGRYITQ-DPIGLKGG 306 + + + S N G+ ++ DP+G Sbjct: 1091 --------TNRCLTSVTTPLG-------QTSTATCNGA-------GQRLSVTDPLGHT-- 1126 Query: 307 WNFYQYPLNPVQYI-DSMGLASKYGHLNNGGYGARPNKPPTPDPSKLPDIAKQLRLPYPI 365 + + + + + I D++G ++ + G + + + +Q + P+ Sbjct: 1127 -SNFTWSNDDLTAITDALGRQTQLRYDALGRLIGVQDAQGNVSRFEYDALGRQTKAVDPL 1185 Query: 366 DQASSAP-------NVFKTFFRALSPYDYTLYCRKWVKPNLTCTPQDDSQYPGMDTKTAS 418 + S + A Y Y R+ + + Q + Sbjct: 1186 GNSVSTGFDANGNVSAILLPNGAGVTYAYDALNRRISRTD------ALGQAESWTYDSMG 1239 Query: 419 DYLPQTNWPTTQLPPGYTCAEPYLFPDINKPDGPATAGIDDLGEILA 465 T+ Y + G +A D ++A Sbjct: 1240 RVASHTDRRNRTTTYSYDALGRPSTATLPGAGGTLSASYDAGNRLVA 1286 Score = 44.0 bits (102), Expect = 0.012, Method: Composition-based stats. Identities = 27/217 (12%), Positives = 46/217 (21%), Gaps = 23/217 (10%) Query: 69 RYLYDPLGRRVAKRVWRRERDL-TGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQ 127 + D G RV + +S + G+D + +D Y Sbjct: 835 EWTLDRFGNRVDYTYDAGLVNHIVVSHIVSAMGRSLSIGYDSNNRINTLSDPLGNTWSYA 894 Query: 128 PGSFTPLIRVETATGELAKT-----------QRRSLADTLQQSGGEDGGSVVFPPVLVQM 176 L +V G ++ +++ S + F Sbjct: 895 YNDDGYLSQVTRPDGSTRSYHYKIRQATDTLPYQARLESIADSKQQRVVFNEFESANGTW 954 Query: 177 LDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTP--ARKIHLYHCDHR--GLP 232 R+ + AD G T + H D G P Sbjct: 955 TGRVVKQTQADGGVLTINYAHVDGGTTGVLVTKPDGSQRRVVFDPVSHYPSSDTLAYGTP 1014 Query: 233 LALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRL 269 LA E G + + Sbjct: 1015 LAQT-------ITYERTASGQTTARTDALGRRTEYAY 1044 >UniRef50_Q8PMX0 Wall-associated protein n=2 Tax=Xanthomonas RepID=Q8PMX0_XANAC Length = 1199 Score = 178 bits (450), Expect = 6e-43, Method: Composition-based stats. Identities = 62/345 (17%), Positives = 102/345 (29%), Gaps = 35/345 (10%) Query: 6 RIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPL 65 R A + Y+YD +G + D + YD RL+ ++ Sbjct: 739 RDNNVASFEYQYDANGNVGAIIDQ------QRGTGYNRYMGYDGLDRLMEA-GSERFGGD 791 Query: 66 VESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTI 125 +RY YD L + + + WY +RLT +QN+ Sbjct: 792 NWNRYTYDVLDNILTAK------------LPGVRENNYWYDA-KNRLTNVQNNAGATTVG 838 Query: 126 YQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEIL 185 L +G E + + + + Sbjct: 839 LSYDPQGNL-----KNKNGQAYTFDYGNRLRDVTGKESYAYDAYGRRTIAGRPTTRTVQV 893 Query: 186 ADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWC 245 + + + G N + I H D G P+A+ T G Sbjct: 894 YTQAGQLFYTEASGKGNMEYVYLNGSLLATRNSGTIKFQHTDALGSPIAVTDTAGQVVER 953 Query: 246 AEYDEWGNLLNEENPHQLQQLIRLPGQQYDEESGLYYNRHRYYDPLQGRYITQDPIG--- 302 +Y +G+ + + I G D +GL Y + RYYD GR+++ DP+ Sbjct: 954 TDYQPYGSPIGKTVDG-----IGYTGHAMDGATGLTYMQQRYYDQDLGRFLSVDPVAADS 1008 Query: 303 -LKGGWNFYQYP-LNPVQYIDSMGLASKYGHLNNGGYGARPNKPP 345 +N Y Y NP ++ D G S G P Sbjct: 1009 VFAANFNRYWYANNNPYKFTDPDGRQSAADRYYGAAVGYMLRNDP 1053 Score = 51.3 bits (121), Expect = 8e-05, Method: Composition-based stats. Identities = 32/244 (13%), Positives = 62/244 (25%), Gaps = 39/244 (15%) Query: 9 RDAHYLYRYDRHGRLT---------EKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRT 59 + YD G L T E + + YD+++RL Sbjct: 546 ESGSTVMAYDAAGNLAWSASGLDLPSTTSCDLEAAAASGRQVVR--TYDTRNRLKTLRFP 603 Query: 60 QYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDR 119 + Y D L +T W V Y ++ R+ T ++ Sbjct: 604 DK-NGNQDWSYTPDGL-----------PAQVTTWNDAGSSSVVNAYNYNKRRMLTSESSG 651 Query: 120 TRIQTI----YQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQ 175 Y + L TG +L + D V+ + Sbjct: 652 QTGWYTWSIGYGYDANGALASQAYPTGLSINYAPNALGQ---PTDVRDQFGNVYASGIGY 708 Query: 176 MLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLAL 235 + + S + + +Q+++ + Y D G A+ Sbjct: 709 YPNGAARQFTYGNGVSHSL--VLNGRQMPQQVRDNNVASFE-------YQYDANGNVGAI 759 Query: 236 VSTE 239 + + Sbjct: 760 IDQQ 763 >UniRef50_B1ZNT0 YD repeat protein n=1 Tax=Opitutus terrae PB90-1 RepID=B1ZNT0_OPITP Length = 2003 Score = 177 bits (449), Expect = 6e-43, Method: Composition-based stats. Identities = 75/341 (21%), Positives = 108/341 (31%), Gaps = 41/341 (12%) Query: 7 IARDAHYLYRYDRHGRLTEKTDLIPEGV--------IRTDDERT--------HRYHYDSQ 50 +A Y YD G+L T+ + G RT Y YD+ Sbjct: 995 LANGLTATYAYDTAGQLLVLTNALASGGTLSRFAYAYNDRGRRTAMETLEGRWTYDYDAL 1054 Query: 51 HRLVHY---TRTQYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSR-KPQVTWYG 106 +L + P + Y+YD LG R+ + + + T Y Sbjct: 1055 GQLTRAAFASTNPAVVPNQDLAYVYDALGNRIRTVENGVTTEYSSNNLNQYVRTGDTTYR 1114 Query: 107 WDGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGS 166 +D D +Q T Y L+ V T + + + S Sbjct: 1115 FDADGNL-VQEATAETTTTYTYDDENRLVAVRRGT-DTWSYGYDAFGGRVTSSENGVTTR 1172 Query: 167 VVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHC 226 V P+ + + D E R+ GL PA Y Sbjct: 1173 FVLDPIGLGNV-----VGEYDAAGELIARYDHGFGLLAR---------ADPAGIEAYYAF 1218 Query: 227 DHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQ--YDEESGLYYNR 284 D G +V+ G Y +G L+ L + GQ E SGL + R Sbjct: 1219 DALGSVQQVVTAAGEVANRYTYAPFGGLIGRT--ETLPNPFQFVGQVGVMSESSGLGFMR 1276 Query: 285 HRYYDPLQGRYITQDPIGLKGGWNFYQYP-LNPVQYIDSMG 324 R+Y GR+I DPIGL GG N Y Y +P+ D G Sbjct: 1277 ARFYSGQCGRFIQADPIGLAGGLNLYAYTMNDPIGVDDPSG 1317 Score = 74.1 bits (180), Expect = 1e-11, Method: Composition-based stats. Identities = 72/532 (13%), Positives = 115/532 (21%), Gaps = 144/532 (27%) Query: 14 LYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYLYD 73 + YD +G RT Y D+ RL T+ + + YD Sbjct: 855 RWTYDANGN---------ASGWTNRRGRTIAYARDNDGRLT----TKTLAGESRTTFDYD 901 Query: 74 PLGRRVAKRVWRRER--DLTGWMSLSRKPQVT----WYGWDGDRLTTIQNDRTRIQTIYQ 127 G + D L+R T + +D D+ + Y Sbjct: 902 VRGNLTSTTDATGTTRFDYDARDWLTRITYPTGPWLQFTYDAAGRRATSLDQLGHRLNYG 961 Query: 128 PGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVL-------------- 173 + L ++ G A L +G + + Sbjct: 962 YDAAGRLEQLTDEQGRRIVHYTFDAAGRLAGKTLANGLTATYAYDTAGQLLVLTNALASG 1021 Query: 174 -----VQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDH 228 A E + + + + Y D Sbjct: 1022 GTLSRFAYAYNDRGRRTAMETLEGRWTYDYDALGQLTRAAFASTNPAVVPNQDLAYVYDA 1081 Query: 229 R--------------------------GLPLALVSTEGATE------------------- 243 G +G Sbjct: 1082 LGNRIRTVENGVTTEYSSNNLNQYVRTGDTTYRFDADGNLVQEATAETTTTYTYDDENRL 1141 Query: 244 ---------WCAEYDEWGNLLNEENPHQLQQ----LIRLPG--QQYDEESGLYYNRHRYY 288 W YD +G + + I L +YD L R Y Sbjct: 1142 VAVRRGTDTWSYGYDAFGGRVTSSENGVTTRFVLDPIGLGNVVGEYDAAGELI---AR-Y 1197 Query: 289 DPLQGRYITQDPIGLKGGW-------------------NFYQYP------------LNPV 317 D G DP G++ + N Y Y NP Sbjct: 1198 DHGFGLLARADPAGIEAYYAFDALGSVQQVVTAAGEVANRYTYAPFGGLIGRTETLPNPF 1257 Query: 318 QYI-------DSMGLASKYGHLNNGGYGARPNKPPTPDPSKLPDIAKQLRLPYPIDQASS 370 Q++ +S GL +G G P L A + P +D S Sbjct: 1258 QFVGQVGVMSESSGLGFMRARFYSGQCGRFIQADPIGLAGGLNLYAYTMNDPIGVDDPSG 1317 Query: 371 A--PNVFKTFFRALSPYDYTLYCRKW--VKPNLTCTPQDDSQYPGMDTKTAS 418 P + ++ Y + W + P ++ Q PG T Sbjct: 1318 KFVPIAVQLGVGVIAYYVASRAFVYWPRIAPVVSIVEQLPEGVPGPVTDIGG 1369 Score = 71.0 bits (172), Expect = 1e-10, Method: Composition-based stats. Identities = 46/294 (15%), Positives = 73/294 (24%), Gaps = 64/294 (21%) Query: 10 DAHYLYRYDRHGRLTEKTDLIPEGVIRTDDER-------------THRYHYDSQHRLVHY 56 Y Y YD G + E D + RY Y ++ L Sbjct: 787 GGSYRYTYDSKGNVIEAADPLGATTRFAHAGAFNRLASVTDAKANLTRYTYTTEGDLQSI 846 Query: 57 TRTQYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQ 116 T + R+ YD G +GW + + DG T Sbjct: 847 TYADGS----VERWTYDANGN------------ASGWTNRRGRTIAYARDNDGRLTTKTL 890 Query: 117 NDRTRIQTIY------------------QPGSFTPLIRVETATGELAKTQRRSLADTLQQ 158 +R Y + L R+ TG + + Sbjct: 891 AGESRTTFDYDVRGNLTSTTDATGTTRFDYDARDWLTRITYPTGPWLQFTYDAAGRR-AT 949 Query: 159 SGGEDGGSVVFPPVLVQMLDRLESE-------ILADRVSEESRRWLASCGLTVEQMQNQM 211 S + G + + L++L E D + + LA+ Sbjct: 950 SLDQLGHRLNYGYDAAGRLEQLTDEQGRRIVHYTFDAAGRLAGKTLANGLTATYAYDTAG 1009 Query: 212 DPVYTPAR-------KIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEE 258 + Y + RG A+ + EG W +YD G L Sbjct: 1010 QLLVLTNALASGGTLSRFAYAYNDRGRRTAMETLEGR--WTYDYDALGQLTRAA 1061 Score = 60.2 bits (144), Expect = 2e-07, Method: Composition-based stats. Identities = 48/337 (14%), Positives = 77/337 (22%), Gaps = 63/337 (18%) Query: 10 DAHYLYRYDRHGRLTEKTDLIPE------------------GVIRTDDERTHRYHYDSQH 51 Y YD LT + I YD+ Sbjct: 655 GRTTAYSYDTAQHLTGVRYASGQEIGYEYNTIAGAPGEHALTQINESGGTHKSVSYDAAG 714 Query: 52 RLVHYTRTQYAEPLVESRYLYDPLGRRV------AKRVWRRERDLTGWMSLSRKPQVTWY 105 RL + + AE L + YD GR + + Sbjct: 715 RLAGTSLSSGAEALG---FAYDSAGRVTVTDALGHATRHFFDYRGLLARTEDALGHPVQM 771 Query: 106 GWDGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGG 165 +D + D Y S +I G + + L Sbjct: 772 TFDDEHNLVELTDPAGGSYRYTYDSKGNVIEAADPLGATTRFAHAGAFNRLASVTDAKAN 831 Query: 166 SVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYH 225 + L I S E + A+ + + + Y Sbjct: 832 LTRYTYTTEGDL----QSITYADGSVERWTYDANGNASGWTNRR---------GRTIAYA 878 Query: 226 CDHRGLPLALVSTEGATEWCAEYDEWGNL----------LNEENPHQLQQLIRLPGQQYD 275 D+ G G + +YD GNL + + I P + Sbjct: 879 RDNDGRLTTKT-LAGESRTTFDYDVRGNLTSTTDATGTTRFDYDARDWLTRITYPTGPWL 937 Query: 276 EESGLYYNRHRYYDPLQGRYITQDPIGLKGGWNFYQY 312 + + YD R + D +G + N Y Y Sbjct: 938 QFT---------YDAAGRRATSLDQLGHR--LN-YGY 962 Score = 57.5 bits (137), Expect = 1e-06, Method: Composition-based stats. Identities = 39/234 (16%), Positives = 61/234 (26%), Gaps = 33/234 (14%) Query: 5 NRIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEP 64 N+ R YR+D G L ++ DDE +RLV R Sbjct: 1103 NQYVRTGDTTYRFDADGNLVQEATAETTTTYTYDDE----------NRLVAVRR-----G 1147 Query: 65 LVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTT--------IQ 116 Y YD G RV + V Y G+ + + Sbjct: 1148 TDTWSYGYDAFGGRVTSSENGVTTR-FVLDPIGLGNVVGEYDAAGELIARYDHGFGLLAR 1206 Query: 117 NDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQM 176 D I+ Y + + +V TA GE+A + L F + Sbjct: 1207 ADPAGIEAYYAFDALGSVQQVVTAAGEVANRYTYAPFGGLIGRTETLPNPFQFVGQVG-- 1264 Query: 177 LDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRG 230 ++++ R G +Q + D G Sbjct: 1265 -------VMSESSGLGFMRARFYSGQCGRFIQADPIGLAGGLNLYAYTMNDPIG 1311 >UniRef50_C5SEN5 Putative uncharacterized protein n=1 Tax=Allochromatium vinosum DSM 180 RepID=C5SEN5_CHRVI Length = 392 Score = 177 bits (449), Expect = 7e-43, Method: Composition-based stats. Identities = 66/369 (17%), Positives = 109/369 (29%), Gaps = 47/369 (12%) Query: 84 WRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGE 143 R Y + + Y L + TG Sbjct: 32 TRAYSTNGLNQYTQAAGATLSYDANANL-------TGDGTWTYGYDLDNRL-KSAAKTGL 83 Query: 144 LAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLT 203 A + Q + G ++ + D + + RR++ G+ Sbjct: 84 SATLAYDAEGRLRQSAIGGTATNLAY--------DGTDLIAEYNSAGSLLRRYVHGPGID 135 Query: 204 VEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQL 263 + + + + DH G +A S+ G Y +G Sbjct: 136 APLVVYEG----SATTNKTWLYADHLGSIVAQASSAGTRTALYRYGPFGEPDVTTG---- 187 Query: 264 QQLIRLPGQQYDEESGLYYNRHRYYDPLQGRYITQDPIGLKGGWNFYQYP-LNPVQYIDS 322 Q R GQQ GLY+ + R+Y P GR++ DPIG N Y Y NP+ ++DS Sbjct: 188 -QRFRYTGQQLIGALGLYHYKARFYSPSLGRFLQTDPIGYADDLNLYTYVLNNPLNFVDS 246 Query: 323 MGLASKYGHLNNGGYGARPNKPPTPDPSKLPDIAKQLRLPYPIDQASSAPNVFKTFFRAL 382 +GL + + P + + N F + Sbjct: 247 LGLEATVAAI----------------PLSTGGYSFTATGSGLHGNITGTFNTGTINFNQI 290 Query: 383 SPYDYTLYCRKWVKPNLTCTPQDDSQYPGMDTKTASDYLPQTNWPTTQLPPGYTCAEPYL 442 P Y + R + T D ++Y G T + +D +W T + P G + Sbjct: 291 RPGTYFITPRPNLPNTFTNWLFDRNEYAGRPTISNTD-----DWNTIRYPDGSVTHGAQI 345 Query: 443 FPDINKPDG 451 P N G Sbjct: 346 HPGRNGTSG 354 Score = 42.5 bits (98), Expect = 0.033, Method: Composition-based stats. Identities = 34/235 (14%), Positives = 56/235 (23%), Gaps = 44/235 (18%) Query: 5 NRIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEP 64 N+ + A YD + LT + T Y YD +RL +T + Sbjct: 41 NQYTQAAGATLSYDANANLT--------------GDGTWTYGYDLDNRLKSAAKTGLSAT 86 Query: 65 LVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTR--I 122 L YD GR + +L +DG L N Sbjct: 87 L-----AYDAEGRLRQSAIGGTATNLA---------------YDGTDLIAEYNSAGSLLR 126 Query: 123 QTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVV--------FPPVLV 174 + ++ PG PL+ E + ++ G P V Sbjct: 127 RYVHGPGIDAPLVVYEGSATTNKTWLYADHLGSIVAQASSAGTRTALYRYGPFGEPDVTT 186 Query: 175 QMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHR 229 R + L + + +Q + Sbjct: 187 GQRFRYTGQQLIGALGLYHYKARFYSPSLGRFLQTDPIGYADDLNLYTYVLNNPL 241 >UniRef50_A9FBB8 Conserved carbohydrate-binding protein, Rhs family n=2 Tax=Sorangium cellulosum 'So ce 56' RepID=A9FBB8_SORC5 Length = 3149 Score = 177 bits (449), Expect = 7e-43, Method: Composition-based stats. Identities = 65/377 (17%), Positives = 112/377 (29%), Gaps = 71/377 (18%) Query: 8 ARDAHYLYRYDRHGRLTEKTDLIP----EGVIRTDDERTHRYHYDSQHRLVHYTRTQYAE 63 YRYD G + E + +P G R+ YD ++L + Sbjct: 2417 RPFQRLRYRYDLVGNIRELNNEVPFDESLGGAVMVARTQQRFAYDDLNQLTEASGIYQER 2476 Query: 64 PLVESRYL----YDPLGRRVAKRVWRRER----------------------DLTGWMSLS 97 + RY YD LG AKR + Sbjct: 2477 GNEQQRYTLGVDYDVLGNATAKRQEVAQYGRVGGNNWQMQYPIRERTYRNDYRYTGPRPH 2536 Query: 98 RKPQVTWYG------------WDGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELA 145 QV Y +D + R +Q L+ V E++ Sbjct: 2537 AANQVDEYVPAESQPRLRELFYDANGNHKQWKYRGNLQRTLSWDEDNRLVSVSENGQEMS 2596 Query: 146 KTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVE 205 + + G ++ E Sbjct: 2597 RALYDGAGERRVHLHRVAGEEETAYVDQHLVVRNGVIATKHLFAGET------------- 2643 Query: 206 QMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQL-- 263 ++ +++D Y + YH DH G + + A EY G L ++ + Sbjct: 2644 RIASKIDADYYQRPPVLYYHPDHLGSTQYVTDQDQALSQHVEYLPSGELWADQTDSRYQN 2703 Query: 264 QQLIRLPGQQYDEESGLYYNRHRYYDPLQGRYITQDPI---GLKGGWN----------FY 310 +Q G++ D +GLY+ R Y+P G +++ DPI ++G N Y Sbjct: 2704 RQPYLFTGKELDLSTGLYHYGARSYEPRLGVWMSPDPILDQYMRGAPNGGVYEPIHLGLY 2763 Query: 311 QYP-LNPVQYIDSMGLA 326 Y NP++++D G++ Sbjct: 2764 TYTRNNPLRFVDPTGMS 2780 Score = 61.4 bits (147), Expect = 8e-08, Method: Composition-based stats. Identities = 44/288 (15%), Positives = 76/288 (26%), Gaps = 34/288 (11%) Query: 4 DNRIARD-------AHYLYRYDRHGRLTEKTDLIPE--GVIRTDDERTHRYHYDSQHRLV 54 NR AR +RYDR G E T P R + T +Y +D+ R+ Sbjct: 2259 GNRAARLVEETSAAGKRSFRYDRFGNTAELTSEFPRLREPHRGPYQATMKYVFDALGRMQ 2318 Query: 55 HYTRTQYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWD--GDRL 112 RY YD G V+ + + + G+D G R+ Sbjct: 2319 ELHFP--GSGEEIVRYGYDRGGAVVSVVGENQRVNPQHPSEPRTTEYLRHIGYDEFGQRV 2376 Query: 113 TTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPV 172 + + + Y + R+ + Q RS+ + + + + Sbjct: 2377 RVVAGNGIETKYRYDESTR----RMTEVNADHQSAQMRSMGRSPRPFQRLRYRYDLVGNI 2432 Query: 173 LVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYH---CDHR 229 + E L V + + + + + D Sbjct: 2433 RELNNEVPFDESLGGAVMVARTQQRFAYDDLNQLTEASGIYQERGNEQQRYTLGVDYDVL 2492 Query: 230 GLPLA---LVSTEGAT---EWCAEYDEWGNLLNEENPHQLQQLIRLPG 271 G A V+ G W +Y + R G Sbjct: 2493 GNATAKRQEVAQYGRVGGNNWQMQY--------PIRERTYRNDYRYTG 2532 Score = 56.7 bits (135), Expect = 2e-06, Method: Composition-based stats. Identities = 44/283 (15%), Positives = 68/283 (24%), Gaps = 56/283 (19%) Query: 5 NRIARDAHY---LYRYDRHGRLTEKTDLIPEGVIRT------------DDERTHRYHYDS 49 NRI Y++ G L TD T D + YD Sbjct: 2146 NRIQGVETRIVTRYQHSPLGELVRVTDARNNATTATYDSVGRMVTLVSPDAGRTEWRYDL 2205 Query: 50 QHRLVHYTRTQYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDG 109 L + A RY YD R+ K + +D+ G Sbjct: 2206 VGNLRAKQTAELAAQGQLIRYEYDF--NRLRKIDYPVTQDVVYTYGEPDDAGDEQ-GNRA 2262 Query: 110 DRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVF 169 RL + + Y R ++ R G Sbjct: 2263 ARLVEETSAAGKRSFRYD--------RFGNTAELTSEFPRLREPHR---------GPYQA 2305 Query: 170 PPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQM---DPVYTPARKIHLYHC 226 V E+ EE R+ G V + + +P + + Y Sbjct: 2306 TMKYVFDALGRMQELHFPGSGEEIVRYGYDRGGAVVSVVGENQRVNPQHPSEPRTTEYLR 2365 Query: 227 DHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRL 269 H G YDE+G + + ++ R Sbjct: 2366 -HIG-----------------YDEFGQRVRVVAGNGIETKYRY 2390 Score = 53.7 bits (127), Expect = 2e-05, Method: Composition-based stats. Identities = 45/275 (16%), Positives = 72/275 (26%), Gaps = 33/275 (12%) Query: 7 IARDAHYLYRYDRH---GRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYT---RTQ 60 + A +D GRL E VI + + + Y D R+ R Q Sbjct: 2096 LDGYARTAIEHDLVALEGRLL-----FQEMVIDANAKMRNTYR-DVGGRIAAVEEFNRIQ 2149 Query: 61 YAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRT 120 E + +RY + PLG V R Y G +T + D Sbjct: 2150 GVETRIVTRYQHSPLGELVRVTDARNNAT------------TATYDSVGRMVTLVSPDAG 2197 Query: 121 RIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLD-- 178 R + Y + + + + L++ VV+ Sbjct: 2198 RTEWRYDLVGNLRAKQTAELAAQGQLIRYEYDFNRLRKIDYPVTQDVVYTYGEPDDAGDE 2257 Query: 179 ------RLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLP 232 RL E A + + +P P + Y D G Sbjct: 2258 QGNRAARLVEETSAAGKRSFRYDRFGNTAELTSEFPRLREPHRGPYQATMKYVFDALGRM 2317 Query: 233 LAL-VSTEGATEWCAEYDEWGNLLNEENPHQLQQL 266 L G YD G +++ +Q Sbjct: 2318 QELHFPGSGEEIVRYGYDRGGAVVSVVGENQRVNP 2352 >UniRef50_C3IAE0 Insecticidal toxin complex protein TccC (Toxin complex protein) n=1 Tax=Bacillus thuringiensis IBL 200 RepID=C3IAE0_BACTU Length = 927 Score = 177 bits (448), Expect = 8e-43, Method: Composition-based stats. Identities = 57/369 (15%), Positives = 106/369 (28%), Gaps = 45/369 (12%) Query: 7 IARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDER--THRYHYDSQHRLVHYTRTQYAEP 64 I Y Y YD G + ++ + +Y YD+ ++LV + + Sbjct: 314 IEVLQDYRYEYDPVGNILSISNDSDLVRFFRNQAVLPKRQYTYDALYQLVSNSGRESDAL 373 Query: 65 LVESR---------------------YLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQ-- 101 Y YD G + + T + Sbjct: 374 RQHQSFSSLITPIPLDDSKYVNYFEKYHYDRAGNLIKLNHKGASQYTTDIYIDDTSNKGV 433 Query: 102 ----------VTWYGWDGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRS 151 + + G++ + Q ++R E + S Sbjct: 434 WRQKDEIPDISSSFDRAGNQKVLRTGIPLDWDSRNQLSCVNMVLR-ENEDNDWESYIYDS 492 Query: 152 LADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSEESRRWLASCG----LTVEQM 207 + + + V + E + + V Sbjct: 493 TGIRIVKWNNRKTKNTTQTDTTVYLPGLELRTRQTGEKFTELLHVVTVDTEIAQVRVLHW 552 Query: 208 QNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLI 267 ++ P + DH G + + +G E+ +G +++ Sbjct: 553 EDGTQPNEVSNDQYRYSINDHLGSSMLELDIQGQIISKEEFYPYGGTAVWTARTKVEANY 612 Query: 268 ---RLPGQQYDEESGLYYNRHRYYDPLQGRYITQDPIGLKGGWNFYQYP-LNPVQYIDSM 323 R G++ D +GLYY +RYY P GR++ DP G G N Y+ NP+ ID M Sbjct: 613 KTIRYSGKELDA-TGLYYYGYRYYMPWLGRWLNPDPAGTVDGMNLYRMVGNNPINSIDKM 671 Query: 324 GLASKYGHL 332 GL + ++ Sbjct: 672 GLLPEKPNI 680 Score = 42.9 bits (99), Expect = 0.026, Method: Composition-based stats. Identities = 29/200 (14%), Positives = 52/200 (26%), Gaps = 13/200 (6%) Query: 22 RLTEKTDLIPEGVIRTDDERTHRYHYD-SQHRLVHYTRTQYAEP-----LVESRYLYDPL 75 E + Y Y+ S RL+ ++ L + RY YDP+ Sbjct: 268 NRIEYNAAGQVQRTEAGNGILTEYTYEESTQRLMRKKDSRELSSEKIEVLQDYRYEYDPV 327 Query: 76 GRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQPGSFTPLI 135 G ++ ++ K Q Y +D + N + Q SF+ LI Sbjct: 328 GNILSISNDSDLVRFFRNQAVLPKRQ---YTYDA-LYQLVSNSGRESDALRQHQSFSSLI 383 Query: 136 RVETATGELAKTQ---RRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSEE 192 G S + + D + + Sbjct: 384 TPIPLDDSKYVNYFEKYHYDRAGNLIKLNHKGASQYTTDIYIDDTSNKGVWRQKDEIPDI 443 Query: 193 SRRWLASCGLTVEQMQNQMD 212 S + + V + +D Sbjct: 444 SSSFDRAGNQKVLRTGIPLD 463 >UniRef50_B0VRR7 Putative uncharacterized protein n=1 Tax=Acinetobacter baumannii SDF RepID=B0VRR7_ACIBS Length = 296 Score = 177 bits (448), Expect = 8e-43, Method: Composition-based stats. Identities = 53/157 (33%), Positives = 77/157 (49%), Gaps = 7/157 (4%) Query: 180 LESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTE 239 L++ L ++ W + + + YHCDH G P + Sbjct: 2 LQAVYLTPIELHQTPDWSDRPYNIHRDPLWKTEKQGKEFDDVWFYHCDHLGTPQEMTDHT 61 Query: 240 GATEWCAEYDEWGNLLNE-------ENPHQLQQLIRLPGQQYDEESGLYYNRHRYYDPLQ 292 GA W AEY WG E EN + IR GQ +DEE+GL+YNR+RYY P Sbjct: 62 GAIIWKAEYKAWGECKAEKAKSNFFENSEIISNNIRFQGQYFDEETGLHYNRYRYYSPYV 121 Query: 293 GRYITQDPIGLKGGWNFYQYPLNPVQYIDSMGLASKY 329 GR++++DPIGL GG N Y Y +P +++D +GL+ + Sbjct: 122 GRFVSKDPIGLLGGSNNYAYAPSPTEWVDPLGLSCQK 158 >UniRef50_Q73MF0 YD repeat protein n=4 Tax=Treponema denticola RepID=Q73MF0_TREDE Length = 3320 Score = 177 bits (448), Expect = 1e-42, Method: Composition-based stats. Identities = 70/358 (19%), Positives = 109/358 (30%), Gaps = 54/358 (15%) Query: 12 HYLYRYDRHGRLTEKTDLIPEGVIRTDD------ERTHRYHYDSQH--RLVHYTRTQYAE 63 + +D G +T K + + + + Y YD + RL+H Sbjct: 2765 RQTFAFDAIGNMTNKLSTTNIPGSQGNSYPKAELDYSLDYEYDPAYAHRLIHA------- 2817 Query: 64 PLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWD-GDRL-----TTIQN 117 Y YD G A++ + + S YG D G L T N Sbjct: 2818 --GTRYYRYDANGNITAEKDGPFTDEEEFTFTYSYFENEDVYGADYGFGLDAPKETEQAN 2875 Query: 118 DRTRIQTI--YQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQ 175 + Y L + + L+ + ++ F Sbjct: 2876 PQDLFAYRRNYTWNERNLLTKSSDRNFTVHYRYGDDGQRALKYTDEGRSETLYFNNFFTI 2935 Query: 176 MLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLAL 235 + + + S +T + K + YH DH G + Sbjct: 2936 HIPTQDQNNPQGLRVHKHIFVGNSRLVTAMTHTDNHGDNEEQKAKRYYYHSDHLGSAQFV 2995 Query: 236 VSTEGATEWCAEYDEWGNLLNEENPHQLQQ-LIRLPGQQYDEESGLYYNRHRYYDPLQGR 294 +G EY +G L EE L + R G++ DEE+GLYY RY DP R Sbjct: 2996 TDWKGRQYEHIEYTPYGELWIEEVAAGLDKLPFRFTGKELDEETGLYYYGARYLDPKYSR 3055 Query: 295 YITQDPI----------------------GLKGGWN-----FYQYP-LNPVQYIDSMG 324 +++ DP G+ G +N Y Y NPV+Y D G Sbjct: 3056 WLSGDPALGEYIPQAPVNDEAKKHNENLPGMGGVFNVVNLHVYHYAGNNPVKYTDPDG 3113 Score = 63.7 bits (153), Expect = 2e-08, Method: Composition-based stats. Identities = 36/275 (13%), Positives = 67/275 (24%), Gaps = 35/275 (12%) Query: 17 YDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYLYDPLG 76 YD GR YD + RL T + E RY YD Sbjct: 2485 YDMLGRRISLESKDTGKKEWI---------YDDKGRLYAETDSVLKNKAAEIRYEYDGFD 2535 Query: 77 RRVAKRVWRRERDLTGWMSLSRK-----------PQVTWYGWDGDRLTTIQNDRTRIQT- 124 R + + + + +K T Y + G+ I+ RT + Sbjct: 2536 RIIKTDYPFSQDIEYKYGAPGQKGAGQVVYKKDETGETHYSY-GNLNEVIKETRTINRYG 2594 Query: 125 ----------IYQPGSFTPLIRVETATGELAKTQRRSLAD--TLQQSGGEDGGSVVFPPV 172 Y+ + ++ GE + + + GS+ + V Sbjct: 2595 AGTNPETASFEYRSDYLGRMQSMKYPDGETITYTYDKGGQLKGVSGAKTTNKGSIKYSYV 2654 Query: 173 LVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLP 232 + D + + R+ + + Y D G Sbjct: 2655 DKILYDEHAQRVYIKYGNGVETRYKYDEKRRWLDTIETKNNQTQDIFQKIKYSFDPVGNV 2714 Query: 233 LALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLI 267 + + T + + NL + Sbjct: 2715 RG-YNNDATTYETQQTYSYDNLYQLISVEGTSNQY 2748 Score = 43.6 bits (101), Expect = 0.014, Method: Composition-based stats. Identities = 40/332 (12%), Positives = 80/332 (24%), Gaps = 66/332 (19%) Query: 2 WPDNRIARDAHYLYRYDRHGRLTEKT---------------------DLIPEGVIRTDDE 40 +PD Y YD+ G+L + + I+ + Sbjct: 2619 YPDG-----ETITYTYDKGGQLKGVSGAKTTNKGSIKYSYVDKILYDEHAQRVYIKYGNG 2673 Query: 41 RTHRYHYDSQHR-L--VHYTRTQYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLS 97 RY YD + R L + Q + + +Y +DP+G + S Sbjct: 2674 VETRYKYDEKRRWLDTIETKNNQTQDIFQKIKYSFDPVGNVRGYNNDATTYETQQTYSYD 2733 Query: 98 RKPQVTWYGWDGDRLTTIQNDRTR------IQTIYQPGS----FTPLIRVETATGELAKT 147 Q+ ++ ++ + + + L + Sbjct: 2734 NLYQLISVEGTSNQYKGKKSFGMTPVSIAKYRQTFAFDAIGNMTNKLSTTNIPGSQGNSY 2793 Query: 148 QRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVS------EESRRWLASCG 201 + L +L + I A++ E + + Sbjct: 2794 PKAELDYSLDYEYDPAYAHRLIHAGTRYYRYDANGNITAEKDGPFTDEEEFTFTYSYFEN 2853 Query: 202 LTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPH 261 V + + P L + W NLL + + Sbjct: 2854 EDVYGADYGFGLDAPKETE--------QANPQDLFAYRRNYTWNER-----NLLTKSSDR 2900 Query: 262 QLQQLIRLP--GQQYDEESG------LYYNRH 285 R GQ+ + + LY+N Sbjct: 2901 NFTVHYRYGDDGQRALKYTDEGRSETLYFNNF 2932 >UniRef50_D0THP1 YD repeat protein n=1 Tax=Bacteroides sp. 2_1_33B RepID=D0THP1_9BACE Length = 1399 Score = 177 bits (448), Expect = 1e-42, Method: Composition-based stats. Identities = 64/335 (19%), Positives = 117/335 (34%), Gaps = 42/335 (12%) Query: 12 HYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQY-----AEPLV 66 +L YD+ G + + D + +R+ Y YD +L + R + P Sbjct: 926 DFLMTYDKTGNMLARLDQLHP-------DRSEMYGYDKIQQLTSFQRGEVKNGVITTPAR 978 Query: 67 ESRYLYDPLGRRVAKRVWRRERDLTGW--MSLSRKPQVTWYGWDGDRLTTIQNDRTRIQT 124 + YD LG R++ + T + + D+ + ND + Sbjct: 979 TQIFRYDALGNRLSVQEDGVTTTYTANAQNEYTSIQGGLNFTPQYDQNGNMLNDDSHT-- 1036 Query: 125 IYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEI 184 YQ L++V E A +L ++++ + + V Sbjct: 1037 -YQYDYNNKLVQV---DAETASYAYDALGRRIRKTTADGTVLFYYAGDDVIE-------- 1084 Query: 185 LADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEW 244 DR +L G+ N+ + YH +H G + + G + Sbjct: 1085 EQDRSKALLATYLLGNGIDDMIKMNRKGNE-------YFYHTNHLGSVMGVTDRSGEVQE 1137 Query: 245 CAEYDEWGNLLNEE------NPHQLQQLIRLPGQQYDEESGLYYNRHRYYDPLQGRYITQ 298 EYD +G + + +++ + G+ YD E+ Y R R +P GR++ Sbjct: 1138 RYEYDPFGKVSSSNVEGVLLAKSRIENDVLFTGRNYDTETENYDYRARVMNPSIGRFVQS 1197 Query: 299 DPIGLKGGWNFYQY-PLNPVQYIDSMGLASKYGHL 332 DP+ G N Y Y N + D GL+S ++ Sbjct: 1198 DPLLYVDGMNSYSYVVNNSLNLKDIWGLSSCEDNI 1232 Score = 87.9 bits (216), Expect = 7e-16, Method: Composition-based stats. Identities = 62/470 (13%), Positives = 112/470 (23%), Gaps = 68/470 (14%) Query: 13 YLYRYDRHGRLTEKTDLIPEG-------------VIRTDDERTHRYHYDSQHRLVHYTRT 59 Y YD +G + TD R + + + YD+ L + Sbjct: 361 RTYTYDSNGNMLTATDPEGHTETYTYESKFNQVASYRDKNGNGYSFTYDNVGNLTIISGP 420 Query: 60 QYAEPLVESRYLY----------DPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDG 109 + RY Y D G + + +DG Sbjct: 421 EGFSN----RYTYNAMGAPLTITDANGNVTQ---NEYDNQGLQISQTDAAGNTRRFTYDG 473 Query: 110 DRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVF 169 D + Y + LIR+ A + + ++ + + Sbjct: 474 SGNMVSSTDARQFVVQYTYNARNELIRLTDALKGTIEFSYDRNGNVVRIKDAKGRITAN- 532 Query: 170 PPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHR 229 D L + + + S + + Q++++ V Y D Sbjct: 533 ------TYDALGNPLSMINPAGRSITYTYNRKSKPIQIKDEAGNVTQ-------YDYDEH 579 Query: 230 GLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEES----GLYYNRH 285 + +V+ A YD GNLL+ P+ E+ G+ + Sbjct: 580 DRVIRMVNAANEVTSFA-YDTKGNLLSMILPNGNSITYSYTANDLMNETTDALGVISTQA 638 Query: 286 RYYDPLQGRYITQDPIGLK-----GGWNFYQYPLNPVQYIDSMGLASKYGHLNNGGYGAR 340 YD D G G N V D G Y + N + Sbjct: 639 --YDANGNVLTQTDGEGRTVTYQYDGLNR------RVSSTDPSGNIEYYTYDRNSNQLSF 690 Query: 341 PNKPPTPDPSKLPDIAKQLRLPYPIDQASSAPNVFKTF--FRALSPYDYTLYCRKWVKPN 398 N+ + D +L + A Sbjct: 691 TNRNGDKEA-YGYDALNRLIEVTDALSNKTRYQYDGEGNLIAATDAKGNKTTYTYDALGQ 749 Query: 399 LTCTPQDDSQYPGMDTKTASDYLPQTNWPTTQLPPGYTCAEP---YLFPD 445 T + + + Q ++ Y + L+PD Sbjct: 750 NTHITFANGTTLEYAYDQMGNVIQQKKRDGAKIKFAYDALDQLVEKLYPD 799 Score = 86.8 bits (213), Expect = 2e-15, Method: Composition-based stats. Identities = 32/281 (11%), Positives = 65/281 (23%), Gaps = 31/281 (11%) Query: 16 RYDRHGRLTEKTDLIPEGVIRTDD------------ERTHRYHYDSQHRLVHYTRTQYAE 63 YD G + + T + +Y YD R++ Sbjct: 533 TYDALGNPLSMINPAGRSITYTYNRKSKPIQIKDEAGNVTQYDYDEHDRVI----RMVNA 588 Query: 64 PLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWY-------GWDGDRLTTIQ 116 + + YD G ++ + + + + T +D + Q Sbjct: 589 ANEVTSFAYDTKGNLLSMILPNGNSITYSYTANDLMNETTDALGVISTQAYDANGNVLTQ 648 Query: 117 NDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQM 176 D YQ + +G + ++ L + L ++ Sbjct: 649 TDGEGRTVTYQYDGLNRRVSSTDPSGNIEYYTYDRNSNQLSFTNRNGDKEAYGYDALNRL 708 Query: 177 LDRLE-----SEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTP--ARKIHLYHCDHR 229 ++ + + D A T + Y D Sbjct: 709 IEVTDALSNKTRYQYDGEGNLIAATDAKGNKTTYTYDALGQNTHITFANGTTLEYAYDQM 768 Query: 230 GLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRLP 270 G + +GA YD L+ + P Sbjct: 769 GNVIQQKKRDGAKI-KFAYDALDQLVEKLYPDGTTDKYGYN 808 Score = 85.6 bits (210), Expect = 4e-15, Method: Composition-based stats. Identities = 41/240 (17%), Positives = 79/240 (32%), Gaps = 25/240 (10%) Query: 16 RYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYLYDPL 75 YD +G + +TD + RT Y YD +R V T Y YD Sbjct: 638 AYDANGNVLTQTD---------GEGRTVTYQYDGLNRRVSSTDPSGN----IEYYTYDRN 684 Query: 76 GRRVAKRVWRRERDLTGWMSLSRKPQVT-------WYGWDGDRLTTIQNDRTRIQTIYQP 128 +++ +++ G+ +L+R +VT Y +DG+ D +T Y Sbjct: 685 SNQLSFTNRNGDKEAYGYDALNRLIEVTDALSNKTRYQYDGEGNLIAATDAKGNKTTYTY 744 Query: 129 GSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILAD- 187 + + A G + + + +QQ + L Q++++L + D Sbjct: 745 DALGQNTHITFANGTTLEYAYDQMGNVIQQKKRDGAKIKFAYDALDQLVEKLYPDGTTDK 804 Query: 188 ----RVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATE 243 + + + +T+ + T ++ Y D L G Sbjct: 805 YGYNEIGQLISAVNKNATVTLAYDKAGRLTAETLNSQVTAYSYDVPNRKRILTYPSGKKV 864 Score = 84.9 bits (208), Expect = 6e-15, Method: Composition-based stats. Identities = 32/214 (14%), Positives = 63/214 (29%), Gaps = 23/214 (10%) Query: 8 ARDAHYLYRYDRHGRLTEKTDLIPEGVIRT------------DDERTHRYHYDSQHRLVH 55 Y+YD R TD T + Y YD+ +RL+ Sbjct: 651 GEGRTVTYQYDGLNRRVSSTDPSGNIEYYTYDRNSNQLSFTNRNGDKEAYGYDALNRLIE 710 Query: 56 YTRTQYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVT-------WYGWD 108 T + +RY YD G +A + + + +L + +T Y +D Sbjct: 711 VTDALSNK----TRYQYDGEGNLIAATDAKGNKTTYTYDALGQNTHITFANGTTLEYAYD 766 Query: 109 GDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVV 168 Q R + + + L+ G K + + ++ Sbjct: 767 QMGNVIQQKKRDGAKIKFAYDALDQLVEKLYPDGTTDKYGYNEIGQLISAVNKNATVTLA 826 Query: 169 FPPVLVQMLDRLESEILADRVSEESRRWLASCGL 202 + + L S++ A +R+ + + Sbjct: 827 YDKAGRLTAETLNSQVTAYSYDVPNRKRILTYPS 860 Score = 76.0 bits (185), Expect = 3e-12, Method: Composition-based stats. Identities = 39/278 (14%), Positives = 76/278 (27%), Gaps = 30/278 (10%) Query: 10 DAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESR 69 + YD G + TD +Y Y++++ L+ T Sbjct: 464 GNTRRFTYDGSGNMVSSTDARQ---------FVVQYTYNARNELIRLTDALKG----TIE 510 Query: 70 YLYDPLGRRVAKRVWRRERDLTGWMSLSR-------KPQVTWYGWDGDRLTTIQNDRTRI 122 + YD G V + + + +L + Y ++ D Sbjct: 511 FSYDRNGNVVRIKDAKGRITANTYDALGNPLSMINPAGRSITYTYNRKSKPIQIKDEAGN 570 Query: 123 QTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLE- 181 T Y +IR+ A E+ + + L +G S+ + +++ Sbjct: 571 VTQYDYDEHDRVIRMVNAANEVTSFAYDTKGNLLS-MILPNGNSITYSYTANDLMNETTD 629 Query: 182 -----SEILADRVSEESRRWLASCGLTVEQMQ--NQMDPVYTPARKIHLYHCDHRGLPLA 234 S D + Q N+ P+ I Y D L+ Sbjct: 630 ALGVISTQAYDANGNVLTQTDGEGRTVTYQYDGLNRRVSSTDPSGNIEYYTYDRNSNQLS 689 Query: 235 LVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQ 272 + G YD L+ + + + G+ Sbjct: 690 FTNRNGDK-EAYGYDALNRLIEVTDALSNKTRYQYDGE 726 Score = 73.3 bits (178), Expect = 2e-11, Method: Composition-based stats. Identities = 60/468 (12%), Positives = 117/468 (25%), Gaps = 66/468 (14%) Query: 11 AHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRT-----QYAEPL 65 Y+YD RLT+ TD + T Y YD Q +L T + Sbjct: 230 GEISYQYDSRRRLTKVTDPM---------GYTLSYGYDKQDQLTSVTDPMGNITEVGYTN 280 Query: 66 VESRYL-----------YDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTW---------- 104 + Y Y+ +R + + + +V Sbjct: 281 QGAVYRVKTAVSDKVIRYEVANKRTVIIDYTEPAAQFSYYIWDEQGRVIEKSGLCCGIQE 340 Query: 105 -YGWDGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGED 163 +D D + D Y S ++ G S + + ++ Sbjct: 341 KLVYDTDDNVIKRTDANGNIRTYTYDSNGNMLTATDPEGHTETYTYESKFNQVASYRDKN 400 Query: 164 GGSVVFPPVLVQML------DRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTP 217 G F V L + + + + A+ +T + NQ + Sbjct: 401 GNGYSFTYDNVGNLTIISGPEGFSNRYTYNAMGAPLTITDANGNVTQNEYDNQGLQISQT 460 Query: 218 A--RKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQYD 275 + D G ++ Y+ L+ + + Sbjct: 461 DAAGNTRRFTYDGSGNMVSSTDARQFVV-QYTYNARNELIRLTDALKGTIEFSY------ 513 Query: 276 EESGLYYNRHRYYDPLQGRYITQDPIGLKGGWNFYQYPLNPVQYIDSMGLASKYGHLNNG 335 + +G N R D GR N Y NP+ I+ G + Y + Sbjct: 514 DRNG---NVVRIKDAK-GRITA----------NTYDALGNPLSMINPAGRSITYTYNRKS 559 Query: 336 GYGARPNKPPTPDPSKLPDIAKQLR-LPYPIDQASSAPNVFKTFFRALSPYDYTLYCRKW 394 ++ + + +R + + S A + + P ++ Sbjct: 560 KPIQIKDEAGNVTQYDYDEHDRVIRMVNAANEVTSFAYDTKGNLLSMILPNGNSITYSYT 619 Query: 395 VKPNLTCTPQDDSQYPGMDTKTASDYLPQTNWPTTQLPPGYTCAEPYL 442 + T + L QT+ + Y + Sbjct: 620 ANDLMNETTDALGVISTQAYDANGNVLTQTDGEGRTVTYQYDGLNRRV 667 >UniRef50_B4WG21 RHS Repeat family n=1 Tax=Synechococcus sp. PCC 7335 RepID=B4WG21_9SYNE Length = 2427 Score = 176 bits (447), Expect = 1e-42, Method: Composition-based stats. Identities = 69/336 (20%), Positives = 104/336 (30%), Gaps = 44/336 (13%) Query: 13 YLYRYDRHGRLTEK----------------TDLIPEGVIRTDDERTHRYHYDSQHRLVHY 56 Y YD G++T D + + + Y YD+ +L Sbjct: 1413 TTYTYDSAGQVTSIFNYAPNDSVNSSYVYSYDALGQQTGVATLDGEWSYSYDAIGQLTGA 1472 Query: 57 --TRTQYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSR-KPQVTWYGWDGDRLT 113 T P + Y YD G R V + T Y +D D Sbjct: 1473 VFASTNPDIPDQDLSYAYDAAGNRTQTVVNGEVTNYVANELNQYESTGATVYDYDADGNL 1532 Query: 114 TIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVL 173 + D IY+ + L+RV G + +L + Sbjct: 1533 IFKADGDS-SWIYEYNNENRLVRVVEDDGSETLHEYDALGNR-----------------T 1574 Query: 174 VQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKI-HLYHCDHRGLP 232 D + +E L D G V Q + + V Y + G Sbjct: 1575 AATYDGIRTEYLIDPFGLGDVVAEYIDGGLVAQYSHGIGLVNRDDGTTDAFYDFNAIGST 1634 Query: 233 LALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQ--YDEESGLYYNRHRYYDP 290 L + G Y +G+ L E ++ GQ +E +GL + R R+YD Sbjct: 1635 AGLTDSTGTQLNSYTYTPFGSELFE--IETVENSFEFVGQWGVSEEANGLDFMRARFYDN 1692 Query: 291 LQGRYITQDPIGLK-GGWNFYQYPLN-PVQYIDSMG 324 GR+ + DP+G G N Y+Y N P ID G Sbjct: 1693 KDGRFNSTDPLGFASGDPNLYRYAFNIPNTLIDPSG 1728 Score = 82.9 bits (203), Expect = 2e-14, Method: Composition-based stats. Identities = 44/285 (15%), Positives = 73/285 (25%), Gaps = 57/285 (20%) Query: 8 ARDAHYLYRYDRHGRLTEK------------TDLIPEGVIRTDDERTHRYHYDSQHRLVH 55 AR Y YD G LT D +T Y Y+S+ +L+ Sbjct: 1240 ARGNAISYAYDESGNLTSIGYADSSFESFGYDDDGNVTRSVNRRGQTIEYTYNSRGQLL- 1298 Query: 56 YTRTQYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMS------LSRKPQVTWYGWDG 109 Q Y YD G V+ + +L + + Y +D Sbjct: 1299 ---RQDNADGTFLAYAYDDRGNLVSAEDEKGTTELEYDSADRLTKITYANGRSLAYTYDA 1355 Query: 110 DRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVF 169 T + Q Y L + +L + L + +G + Sbjct: 1356 GGRRTSMTEADGNQVNYGYDEAGRLAELTDENDDLIVSYAYDEVGRLAREDNGNGTYTTY 1415 Query: 170 PPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHR 229 D + + + + +V ++Y D Sbjct: 1416 TY---------------DSAGQVTSIFNYAPNDSV--------------NSSYVYSYDAL 1446 Query: 230 GLPLALVSTEGATEWCAEYDEWGNLL----NEENPHQLQQLIRLP 270 G + + +G W YD G L NP Q + Sbjct: 1447 GQQTGVATLDGE--WSYSYDAIGQLTGAVFASTNPDIPDQDLSYA 1489 Score = 77.2 bits (188), Expect = 1e-12, Method: Composition-based stats. Identities = 38/261 (14%), Positives = 63/261 (24%), Gaps = 41/261 (15%) Query: 9 RDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVES 68 + + YD G L + D + + + S + L T + Sbjct: 1198 EGSDLGFVYDDKGNLITQIDPLGQRTEFIYEP--------SFNSLSSVTDARGN----AI 1245 Query: 69 RYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQP 128 Y YD G + + +G+D D T +R Y Sbjct: 1246 SYAYDESGNLTSIGYADSSFES--------------FGYDDDGNVTRSVNRRGQTIEYTY 1291 Query: 129 GSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADR 188 S L+R + A G + + + + + D + Sbjct: 1292 NSRGQLLRQDNADGTFLAYAYDDRGNLVSAEDEKGTTELEY--------DSADRLTKITY 1343 Query: 189 VSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWCAEY 248 + S + G M Y D G L Y Sbjct: 1344 ANGRSLAYTYDAGGRRTSMTEADGNQVN-------YGYDEAGRLAELTDENDDLIVSYAY 1396 Query: 249 DEWGNLLNEENPHQLQQLIRL 269 DE G L E+N + Sbjct: 1397 DEVGRLAREDNGNGTYTTYTY 1417 Score = 60.2 bits (144), Expect = 2e-07, Method: Composition-based stats. Identities = 36/260 (13%), Positives = 71/260 (27%), Gaps = 35/260 (13%) Query: 9 RDAHYLYRYDRHGRLTE------KTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYA 62 D Y YD G T+ T+ + + + + Y YD+ L+ A Sbjct: 1482 PDQDLSYAYDAAGNRTQTVVNGEVTNYVANELNQYESTGATVYDYDADGNLI-----FKA 1536 Query: 63 EPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRI 122 + Y Y+ R V L + +L + T +DG R + + Sbjct: 1537 DGDSSWIYEYNNENRLVRVVEDDGSETLHEYDALGNRTAAT---YDGIRTEYLIDPFGLG 1593 Query: 123 QTIYQPGSFTPLIR----VETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLD 178 + + + + + + T + + + G + Sbjct: 1594 DVVAEYIDGGLVAQYSHGIGLVNRDDGTTDAFYDFNAIGSTAGLTDSTGTQLNSYTYTPF 1653 Query: 179 RLESEILADRVSEESRRWLASCGLTVEQMQNQ-MDPVYTPARKIHLYHCDHRG------- 230 SE+ E S ++ G++ E M + + D G Sbjct: 1654 G--SELFEIETVENSFEFVGQWGVSEEANGLDFMRARFYDNKDGRFNSTDPLGFASGDPN 1711 Query: 231 -------LPLALVSTEGATE 243 +P L+ G Sbjct: 1712 LYRYAFNIPNTLIDPSGEII 1731 Score = 58.3 bits (139), Expect = 6e-07, Method: Composition-based stats. Identities = 36/266 (13%), Positives = 72/266 (27%), Gaps = 40/266 (15%) Query: 18 DRHGR-LTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYLYDPLG 76 D +G + + + + + + + +S + T + + Y YD G Sbjct: 1031 DTNGNRIVAEYNSGELTELVASNGDSTTFVRNSDSFITQATDSLG----RTTTYTYD--G 1084 Query: 77 RRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQPGSFTPLIR 136 +A S++ T Y ++ D T D Q ++ L+R Sbjct: 1085 ELLA--------------SVTAPEGTTSYTYNNDFAVTSVTDGNGTQVNFEYDDRGRLVR 1130 Query: 137 VETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSEESRRW 196 GE + T + + + +F Q S++ + Sbjct: 1131 ESIDEGEESITYDYGENGEVTVTDASGAETQLFLNDRGQ-----VSQLTDALGRTLRLNY 1185 Query: 197 LASCGLTVEQMQNQMDPVYTPARKIHLYHC-DHRG------------LPLALVSTEGATE 243 + + D + K +L D G ++ G Sbjct: 1186 DTAGNVVGIDAPEGSDLGFVYDDKGNLITQIDPLGQRTEFIYEPSFNSLSSVTDARGNAI 1245 Query: 244 WCAEYDEWGNLLNEENPHQLQQLIRL 269 YDE GNL + + Sbjct: 1246 -SYAYDESGNLTSIGYADSSFESFGY 1270 >UniRef50_C4DQZ4 Rhs family protein n=2 Tax=Stackebrandtia nassauensis DSM 44728 RepID=C4DQZ4_9ACTO Length = 2449 Score = 176 bits (447), Expect = 1e-42, Method: Composition-based stats. Identities = 61/392 (15%), Positives = 105/392 (26%), Gaps = 77/392 (19%) Query: 10 DAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHR--YHYDSQHRLVHYTRTQYAE---- 63 Y YD G +T D + V + + Y YD+ +RL+ T ++ Sbjct: 1737 LQDLRYTYDPSGNITHIADEAQQAVFFRNQRVSASSDYRYDAMYRLIEATGREHLGQNGK 1796 Query: 64 ---------------------PLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQV 102 RY YD +G ++ + +P + Sbjct: 1797 PSDPHDTSRSRLAHPNDGQAMGRYRQRYRYDAVGNLLSMAHNGSGSADWTRRYVYLEPSL 1856 Query: 103 TWYGWDGDRLTTIQNDRTRIQTIY-----------------QPGSFTPLIRVET------ 139 +RL+ + + + L V Sbjct: 1857 LQPERSSNRLSGTTDASDAPLHRFGYDGHGNITGMPELPFMDWDASDRLSAVSRQPDPAP 1916 Query: 140 ATGELAKTQRRSLADTLQQSGGEDGGSVVFP-PVLVQMLDRLESEILADRVSEESRRWLA 198 T EL + + +++ G +V + V + R + + ++ L Sbjct: 1917 DTAELTYYRYDATGGRVRKVTRRGGRTVAERIYIGVFEVYREFGDDGQRTLERQTLHLLD 1976 Query: 199 SCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEE 258 P R + +H + EY +G + Sbjct: 1977 GDQRVALAETRTEGTDDAPERLLRFPLANHLNSATLELDDAARIISYEEYYPYGGTSFQS 2036 Query: 259 NPHQLQQL--IRLPGQQYDEESGLYYNRHRYYDPLQGRYITQDP-IG------------- 302 Q + R G++ D E+G YY RYY P R+I+ DP I Sbjct: 2037 VRSQAETPKRYRFSGKERDTETGFYYFGARYYAPWLARWISCDPQIADFAAITGSADESQ 2096 Query: 303 ---------LKGGWNFY-QYPLNPVQYIDSMG 324 G + Y NPV D G Sbjct: 2097 TDADPSPPVTGGAVSLYEAMGGNPVVMTDPDG 2128 Score = 55.6 bits (132), Expect = 4e-06, Method: Composition-based stats. Identities = 43/286 (15%), Positives = 70/286 (24%), Gaps = 57/286 (19%) Query: 5 NRIARDAH------YLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTR 58 NR++ + + YD HG +T +L +D+ RL +R Sbjct: 1864 NRLSGTTDASDAPLHRFGYDGHGNITGMPELPF-------------MDWDASDRLSAVSR 1910 Query: 59 TQYAEPLVE--SRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQ 116 P + Y YD G RV K R R + + + +G DG R Q Sbjct: 1911 QPDPAPDTAELTYYRYDATGGRVRKVTRRGGRTVAERIYIGVFEVYREFGDDGQRTLERQ 1970 Query: 117 NDR----------TRIQTIYQPGSFTPLIRVETAT------------GELAKTQRRSLAD 154 +T + L+R A + + Sbjct: 1971 TLHLLDGDQRVALAETRTEGTDDAPERLLRFPLANHLNSATLELDDAARIISYEEYYPYG 2030 Query: 155 TLQQSGGEDGGSVVFPPVLVQMLDRLESEILA---DRVSEESRRWL----------ASCG 201 E+ + RW+ A G Sbjct: 2031 GTSFQSVRSQAETPKRYRFSGKERDTETGFYYFGARYYAPWLARWISCDPQIADFAAITG 2090 Query: 202 LTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWCAE 247 E + + LY G P+ + +G E Sbjct: 2091 SADESQTDADPSPPVTGGAVSLYEA-MGGNPVVMTDPDGRQITAYE 2135 Score = 54.4 bits (129), Expect = 9e-06, Method: Composition-based stats. Identities = 36/266 (13%), Positives = 62/266 (23%), Gaps = 45/266 (16%) Query: 16 RYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQH-RLVHYTRTQYAEPLVESRYLYDP 74 YD G T R + Y YD ++ RL T+ L + RY YDP Sbjct: 1696 DYDARGHRTSI---------RYGNGSRTEYTYDPENFRLRRLRTTRGDTALQDLRYTYDP 1746 Query: 75 LGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDR--------------- 119 G ++ +S Y +D R Sbjct: 1747 SGNITHIADEAQQAVFFRNQRVSASSD---YRYDAMYRLIEATGREHLGQNGKPSDPHDT 1803 Query: 120 --------------TRIQTIYQPGSFTPLIRV--ETATGELAKTQRRSLADTLQQSGGED 163 R + Y+ + L+ + + + L +L Q Sbjct: 1804 SRSRLAHPNDGQAMGRYRQRYRYDAVGNLLSMAHNGSGSADWTRRYVYLEPSLLQPERSS 1863 Query: 164 GGSVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHL 223 L R + + ++ ++ ++ Sbjct: 1864 NRLSGTTDASDAPLHRFGYDGHGNITGMPELPFMDWDASDRLSAVSRQPDPAPDTAELTY 1923 Query: 224 YHCDHR-GLPLALVSTEGATEWCAEY 248 Y D G + G T Y Sbjct: 1924 YRYDATGGRVRKVTRRGGRTVAERIY 1949 Score = 51.3 bits (121), Expect = 7e-05, Method: Composition-based stats. Identities = 46/328 (14%), Positives = 72/328 (21%), Gaps = 60/328 (18%) Query: 14 LYRYDRHGRLTEKTDLIPEGVIRTDD------------ERTHRYHYDSQHRLVH--YTRT 59 Y YD + + + +D R+ YD RLV Sbjct: 1505 RYSYDLMDNRVGQQSMEAGDRLAFNDATGKPVRMWNSRGARFRFEYDELRRLVRVHVRDR 1564 Query: 60 QYAEPLVESRYLY-----DPLGRRVAKRVWRR----------ERDLTGWMSLSRKPQVTW 104 + ++ R Y DP R + RV+R D G + + + Sbjct: 1565 EDGPESLQERLEYGEDQPDPAERNLRDRVFRHFDAAGIATSDAYDFKGNLLSATRQLTDQ 1624 Query: 105 YGWDGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDG 164 Y D D + Q + + + + S G Sbjct: 1625 YRGDPDWSADVPLSEPLYTNATQFDALNRPTAMTAPDHSVISLEYNEANLPDSMSARLSG 1684 Query: 165 GSVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLY 224 G V P V D + + + + Y Sbjct: 1685 GQTVTPLVTGIDYDARGHRTSIRYGNGSRTEYTYDPENFRLRRLRTTRGDTALQDLRYTY 1744 Query: 225 HCDHRGLPLALVSTEGATE----------WCAEYDEWGNLLNEENPHQLQQLIRLPGQQY 274 D G + YD L+ L Q G+ Sbjct: 1745 --DPSGNITHIADEAQQAVFFRNQRVSASSDYRYDAMYRLIEATGREHLGQN----GKPS 1798 Query: 275 DE---------------ESGLYYNRHRY 287 D G Y R+RY Sbjct: 1799 DPHDTSRSRLAHPNDGQAMGRYRQRYRY 1826 >UniRef50_UPI0001B58169 YD repeat-containing protein n=1 Tax=Streptomyces sp. AA4 RepID=UPI0001B58169 Length = 1724 Score = 176 bits (447), Expect = 1e-42, Method: Composition-based stats. Identities = 90/429 (20%), Positives = 125/429 (29%), Gaps = 74/429 (17%) Query: 2 WPDNRIARDAH-----YLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHY 56 + D +A Y D GR+ + +R Y+ L + Sbjct: 1035 YADGSLAAVQDSLSGRTAYTRDPAGRVVTVSSPAGGEELR----------YNPAGELTAW 1084 Query: 57 TRTQYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQ 116 + + YD LGRR+ R +V Y W GD LT Sbjct: 1085 SGSPGLSAD------YDSLGRRIRHREVHPGGV-----------RVWEYAWTGDLLTG-- 1125 Query: 117 NDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQM 176 + T G + + L + + GSV V Sbjct: 1126 --------------------LRTPDGAQWRYRYDPLGRRIAKERLLADGSVAESTRFVWD 1165 Query: 177 LDRLESEILADRVS-EESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLAL 235 L + D + W G Q + P + D G P L Sbjct: 1166 GFVLIEQEHTDPSGVRRTTTWERRPGSDEPVTQLERGP---GGDRFASVVTDAIGTPTEL 1222 Query: 236 VSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEESGLYYNRHRYYDPLQGRY 295 + G W A WG + ++ PGQ D ESGL+YN RYYDP RY Sbjct: 1223 IDEHGGLAWSARRSLWGRVQPG------GIPLQFPGQYADAESGLHYNVFRYYDPAAARY 1276 Query: 296 ITQDPIGLKGGWNFYQYPLNPVQYIDSMGLASK----------YGHLNNGGYGARPNKPP 345 I+QDP+GL+GG N Y +P D +GL + + A Sbjct: 1277 ISQDPLGLEGGPNPSNYVPDPFAATDVLGLKCGDKGKGKATDPPPADSTAKHNADNGGGS 1336 Query: 346 TPDPSKLPDIAKQLRLPYPIDQASSAPNVFKTFFRALSPYDYTLYCRKWVKPNLTCTPQD 405 T S A R D S+ K + K + N T D Sbjct: 1337 TSSSSTGKGKADNKRKRDDKDDGSADKGDPKKNKDDVWDRMAWNSDAKNARKNQTGDKND 1396 Query: 406 DSQYPGMDT 414 G D Sbjct: 1397 PFHQAGSDV 1405 Score = 84.1 bits (206), Expect = 1e-14, Method: Composition-based stats. Identities = 38/272 (13%), Positives = 62/272 (22%), Gaps = 29/272 (10%) Query: 10 DAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESR 69 + Y YD GRL +TD D RT Y YD+ + + T + E Sbjct: 838 GRTWTYTYDPLGRLVAQTD---------FDGRTRTYDYDAAGQAIRVTEPDGSVTENE-- 886 Query: 70 YLYDPLGRRVAKRVWRRERDLTGWMSLS-----RKPQVTWYGWD-GDRLTTIQNDRTRIQ 123 YD LG R+ R R + V + D R+ D ++ Sbjct: 887 --YDLLGNRIEVRGPHRTVRYAYDPVGNVVRVESADSVVEFDRDLYGRVVREAIDGVEVR 944 Query: 124 TIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESE 183 + +R T +G + + + + + Sbjct: 945 --FSYDEQNQTVRRRTPSGAESVWTFDDEDRPVSLTTAGHTVRYRLDDEGRVLARDTDGV 1002 Query: 184 ILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATE 243 + A + Y + G G Sbjct: 1003 STLQQAFGPRGLVTAQQVSRGTTPVQRRGLEYYADGSLAAVQDSLSGRTAYTRDPAGRVV 1062 Query: 244 --------WCAEYDEWGNLLNEENPHQLQQLI 267 Y+ G L L Sbjct: 1063 TVSSPAGGEELRYNPAGELTAWSGSPGLSADY 1094 Score = 65.2 bits (157), Expect = 5e-09, Method: Composition-based stats. Identities = 79/477 (16%), Positives = 131/477 (27%), Gaps = 70/477 (14%) Query: 14 LYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLV------- 66 Y YD GR+T D + ++RY YD++ R V Q Sbjct: 567 RYTYDPDGRVTSWEDR---------NGVSYRYVYDAEGRCVRTEGEQGFYSGSFEFRPEA 617 Query: 67 -ESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTI 125 +R+ D LG + + VT+ WD + D T Sbjct: 618 RITRFT-DSLG---HVSEYEYNLEGRPVRETDPLGNVTFSEWDRYGNLLRRVDPLGRVTE 673 Query: 126 YQPGSFTPLIRVETATGELAKTQRRS--------LADTLQQSGGEDGGSVVFPPVLVQML 177 Y + V G LA+ + D D + P Sbjct: 674 YTYAEDGTPLTVARPDGSLAELEHDGAELAAITVHGDGRTWQRRYDRPAGPELPGFPGEA 733 Query: 178 DRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVS 237 + ++E+ + + + R+ L+ D G + V Sbjct: 734 EVADAELDQFGRPRTAPEVGGGRVQLGWTVDGKPASRTGVRRERALWRYDREGNEIEHVD 793 Query: 238 TEGATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEESGLYYNRHRYYDPLQGR-YI 296 G EY + + +P + G YD E L DP GR + Sbjct: 794 ELGRAT-RHEYGPFDVVTAVVDPSGAR-----TGYTYDTELRLTSVT----DP-LGRTWT 842 Query: 297 -TQDPIGLKGGWNFYQYPLNPVQYIDSMGLASKYGHLNNGGYGARPNKPPTPDPSKLPDI 355 T DP+G V D G Y + G + ++ + Sbjct: 843 YTYDPLGRL------------VAQTDFDGRTRTYDYDAAGQAIRVTEPDGSVTENEYDLL 890 Query: 356 AKQLRLPYPIDQASSAPNVFKTFFRALSPYDYTLYCRKWVKPNLTCTPQDDSQYPGMDTK 415 ++ + P A + R S + R + D Sbjct: 891 GNRIEVRGPHRTVRYAYDPVGNVVRVESADSVVEFDRDLYGRVVREAI--DGVEVRFSYD 948 Query: 416 TASDYLPQTNWPTTQLPPGYTCAEPYLFPDINKPDGPATAG------IDDLGEILAK 466 + + + P G + F D ++P TAG +DD G +LA+ Sbjct: 949 EQNQTVR------RRTPSG--AESVWTFDDEDRPVSLTTAGHTVRYRLDDEGRVLAR 997 Score = 58.7 bits (140), Expect = 4e-07, Method: Composition-based stats. Identities = 49/272 (18%), Positives = 80/272 (29%), Gaps = 59/272 (21%) Query: 15 YRYDRHGRLTEKTDLIPE------------GVIRTDDERTHRYHYDSQHRLVHYTRTQYA 62 +RYDR G E D + + Y YD++ RL T Sbjct: 780 WRYDREGNEIEHVDELGRATRHEYGPFDVVTAVVDPSGARTGYTYDTELRLTSVT----- 834 Query: 63 EPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRI 122 DPLGR Y +D Q D Sbjct: 835 ----------DPLGR------------------------TWTYTYDPLGRLVAQTDFDGR 860 Query: 123 QTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVL-VQMLDRLE 181 Y + IRV G + + + L + ++ G + PV V ++ + Sbjct: 861 TRTYDYDAAGQAIRVTEPDGSVTENEYDLLGNRIEVRGPHRTVRYAYDPVGNVVRVESAD 920 Query: 182 SEILADRVSEESRRWLASCGLTVEQMQNQMDPV---YTPARKIHLYHCDHRGLPLALVST 238 S + DR A G+ V ++ + TP+ ++ D P++L + Sbjct: 921 SVVEFDRDLYGRVVREAIDGVEVRFSYDEQNQTVRRRTPSGAESVWTFDDEDRPVSLTTA 980 Query: 239 EGATEWCAEYDEWGNLLNE--ENPHQLQQLIR 268 D+ G +L + LQQ Sbjct: 981 GHTV--RYRLDDEGRVLARDTDGVSTLQQAFG 1010 Score = 48.7 bits (114), Expect = 5e-04, Method: Composition-based stats. Identities = 68/470 (14%), Positives = 114/470 (24%), Gaps = 71/470 (15%) Query: 18 DRHGRLTEKT--DLIPEGVIRTDDERTHRYHYDSQHRLVHYT--RTQYAEPLVESRYLYD 73 D G TE + D ++ + D R+ A +V Y Y Sbjct: 492 DADGSRTELSYADNGVPALLTHSSGIQVGFRTDGL-RITELRMIGAGPAPDVVVRAYRY- 549 Query: 74 PLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQPGSFTP 133 ++ Y +D D T DR + Y + Sbjct: 550 -------------NYQGHLSEVVNSSGTAMRYTYDPDGRVTSWEDRNGVSYRYVYDAEGR 596 Query: 134 LIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRL------ESEILAD 187 +R E G + + + + G + L R + D Sbjct: 597 CVRTEGEQGFYSGSFEFRPEARITRFTDSLGHVSEYEYNLEGRPVRETDPLGNVTFSEWD 656 Query: 188 RVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGA-TEWCA 246 R RR +T P+ L +H G LA ++ G W Sbjct: 657 RYGNLLRRVDPLGRVTEYTYAEDGTPLTVARPDGSLAELEHDGAELAAITVHGDGRTWQR 716 Query: 247 EYDEWGNLLNEENPHQLQQLIRLPGQQYDEESGLYYNRHRYYDPLQGRYITQDPIGLKGG 306 YD P + PG+ ++ L P G Sbjct: 717 RYD---------RPAGPELP-GFPGEAEVADAELDQFGRPRTAPEVG------------- 753 Query: 307 WNFYQYPLNPVQYIDSMGLASKYGHLNNGGYGARPNKPPTPDPSKLPDIAKQLRLPYPID 366 G + G +G +R + ++ + Sbjct: 754 -----------------GGRVQLGWTVDGKPASRTGVRRERALWRYDREGNEIEHVDELG 796 Query: 367 QAS-SAPNVFKTFFRALSPYDYTLYCRKWVKPNLTCTPQDDSQYPGMDTKTASDYLPQTN 425 +A+ F + P + LT + + QT+ Sbjct: 797 RATRHEYGPFDVVTAVVDPSGARTGYTYDTELRLTSVTDPLGRTWTYTYDPLGRLVAQTD 856 Query: 426 WPTTQLPPGYTCAEPYLFPDINKPDGPATAGIDDL--GEILAKMKQRTSR 473 + Y A + + +PDG T DL I + RT R Sbjct: 857 FDGRTRTYDYDAAGQAI--RVTEPDGSVTENEYDLLGNRIEVRGPHRTVR 904 Score = 47.5 bits (111), Expect = 0.001, Method: Composition-based stats. Identities = 43/307 (14%), Positives = 77/307 (25%), Gaps = 60/307 (19%) Query: 3 PDNRIARDAHYLY-RYDRHGRLTEKTDLIPEGVIRT------------------------ 37 P + + +DR+G L + D + T Sbjct: 640 PVRETDPLGNVTFSEWDRYGNLLRRVDPLGRVTEYTYAEDGTPLTVARPDGSLAELEHDG 699 Query: 38 ---------DDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYLYDPLGR-RVAKRVWRRE 87 D RT + YD R + + D GR R A V Sbjct: 700 AELAAITVHGDGRTWQRRYD---RPAGPELPGFPGEAEVADAELDQFGRPRTAPEVGGGR 756 Query: 88 RD--LTGWMSLSRKPQV------TWYGWDGDRLTTIQNDRTRIQTIYQPGSFTPLIRVET 139 T + + V Y +G+ + + + Y P F + V Sbjct: 757 VQLGWTVDGKPASRTGVRRERALWRYDREGNEIEHVDELGRATRHEYGP--FDVVTAVVD 814 Query: 140 ATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQML------DRLESEILADRVSEES 193 +G + L G + + + L D D + Sbjct: 815 PSGARTGYTYDTEL-RLTSVTDPLGRTWTYTYDPLGRLVAQTDFDGRTRTYDYDAAGQAI 873 Query: 194 RRWLASCGLTVEQMQNQMD--PVYTPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEW 251 R +T + + V P R + D G + + + + D + Sbjct: 874 RVTEPDGSVTENEYDLLGNRIEVRGPHRTVRY-AYDPVGNVVRV--ESADSVVEFDRDLY 930 Query: 252 GNLLNEE 258 G ++ E Sbjct: 931 GRVVREA 937 >UniRef50_B8FA91 YD repeat protein n=6 Tax=Desulfatibacillum alkenivorans AK-01 RepID=B8FA91_DESAA Length = 2058 Score = 176 bits (446), Expect = 1e-42, Method: Composition-based stats. Identities = 56/343 (16%), Positives = 99/343 (28%), Gaps = 54/343 (15%) Query: 8 ARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVE 67 +Y Y Y G + TD + Y YD HRL T + Sbjct: 1505 TDYQNYAYTYTDGGNIASITDNMRSHAY--------TYAYDDLHRLTGEASTTGS----- 1551 Query: 68 SRYLYDPLGRRVAKRVWRRERDLTGW------MSLSRKPQVTWYGWDGDRLTT-----IQ 116 + YD +G + K +++ V Y +D + T Sbjct: 1552 MAWTYDSIGNILTKSQDGSSMTYAYNSVTHKLDTVTAGGTVYNYSYDANGNITACPKLEG 1611 Query: 117 NDRTRIQTIYQPGSFTPLIRVE----TATGELAKTQRRSLADTLQQSGGEDGGSVVFPPV 172 ++V +++ + + Sbjct: 1612 AGSISATLAIDYNVDNMPVQVVKSVSGQPDVTTNFYYDGNGARVRKEVVGESTTFY---- 1667 Query: 173 LVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLP 232 + L + + + +++ + ++ T I + DH G Sbjct: 1668 ---------AGSLYEVKNGVATKYIFGADRRIAKI--------TDGEGIQYFSKDHLGSS 1710 Query: 233 LALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEESGLYYNRHRYYDPLQ 292 + GA A+Y +G + Q+ DE +GLY R+YDP Sbjct: 1711 TVVTDESGAVVEQADYRPFGEDRFYTGSVATPTPYKYTDQELDESTGLYNYDARHYDPAI 1770 Query: 293 GRYITQDP----IGLKGGWNFYQYP-LNPVQYIDSMGLASKYG 330 GR+I+ D + N Y Y NP+ Y+D G + G Sbjct: 1771 GRFISPDSLIPNLYDPQQLNPYAYCRNNPLIYVDPSGHYTVGG 1813 Score = 61.4 bits (147), Expect = 8e-08, Method: Composition-based stats. Identities = 40/290 (13%), Positives = 69/290 (23%), Gaps = 29/290 (10%) Query: 7 IARDAHYLY---RYDRHGRLTEKTDLIPE---------------GVIRTDDERTHRYHYD 48 A Y YD GR T V DD T D Sbjct: 1201 TAPTTDVHYVSTEYDYFGRATSIATPNTSSTVAVTEFDYEGPKTTVTNPDDGITETIL-D 1259 Query: 49 SQHRLVHYTRTQYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQ------- 101 R L + Y YD LG+ + + T + +L RK Q Sbjct: 1260 YLGR-TREIVEHNDSSLYTTAYSYDVLGQLTSILDDKGNTISTAYDTLGRKTQMVHPDMG 1318 Query: 102 VTWYGWDGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGG 161 Y +D + T Q D + S + + + + Sbjct: 1319 TWTYSYDANGNLTSQTDAKSQVVNFTYDSLNRITQKYYPNSSMGSVDYIYDGYLGLGTDS 1378 Query: 162 EDGGSVVFPPVLVQMLDRLE--SEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPAR 219 + V + + I +D + S+ T + Y Sbjct: 1379 VGRLTFVQNSESYYWIKDYDPMGRISSDGRCDRSQPMWYDFSYTYDLAGRPTSTEYPDGM 1438 Query: 220 KIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRL 269 ++ + L ++S + Y G + + + Sbjct: 1439 EVDYTYIPGTSLWSQVISGTQVLAEFSGYTAHGKYELVDYANGVTTEHTY 1488 Score = 54.8 bits (130), Expect = 6e-06, Method: Composition-based stats. Identities = 29/218 (13%), Positives = 57/218 (26%), Gaps = 21/218 (9%) Query: 43 HRYHYDSQHRLVHYTRTQYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRK--- 99 Y +D + Y YD G ++ T + +++ Sbjct: 1010 TDYSHDVYGNVTDVEYWLDGGTSPSVSYTYDAYGNQLTFTDAITNTWTTTYDAVAHAYPV 1069 Query: 100 ------PQVTWYGWD-GDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSL 152 T WD G D T + +F L + +T G + Sbjct: 1070 TTQNPLGHTTSKTWDQGFGAPLTSTDANNYTTAFTYDAFGRLEQTDTPDGGTTEIVYTDT 1129 Query: 153 --ADTLQQSGGEDGGSVVFPPVLVQMLDRLES--EILADRVSEESRRWLASCGLTVEQM- 207 T+ + S + + L R E + + S+ G + Q+ Sbjct: 1130 TCPRTVLTRVYDTATSYIASTDYIDGLGRNIQHVESTENSLYTVSQTEYDEMGRVIYQVG 1189 Query: 208 ----QNQMDPVYTPARKIHLYHC--DHRGLPLALVSTE 239 + P +H D+ G ++ + Sbjct: 1190 PFFNGTNTASITAPTTDVHYVSTEYDYFGRATSIATPN 1227 Score = 53.3 bits (126), Expect = 2e-05, Method: Composition-based stats. Identities = 43/323 (13%), Positives = 71/323 (21%), Gaps = 58/323 (17%) Query: 2 WPDNRIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRY---HYDSQHRLVHYTR 58 W D + Y YD +G TD I T D H Y + T Sbjct: 1026 WLDGGTSP--SVSYTYDAYGNQLTFTDAITNTWTTTYDAVAHAYPVTTQNPLGHTTSKTW 1083 Query: 59 TQY--------AEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWD-- 108 Q + + YD GR + + V +D Sbjct: 1084 DQGFGAPLTSTDANNYTTAFTYDAFGRLEQTDTPDGGTTEIVYTDTTCPRTVLTRVYDTA 1143 Query: 109 -------------GDRLTTIQNDRTRIQTI--YQPGSFTPL---------------IRVE 138 G + +++ + T+ + + I Sbjct: 1144 TSYIASTDYIDGLGRNIQHVESTENSLYTVSQTEYDEMGRVIYQVGPFFNGTNTASITAP 1203 Query: 139 TATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSEESRRWLA 198 T T+ + + S V + D ++E +L Sbjct: 1204 TTDVHYVSTEYDYFGRATSIA-TPNTSSTVAVTEFDYEGPKTTVTNPDDGITETILDYLG 1262 Query: 199 SCGLTVEQMQ---NQMDPVYTPARKIHLYHCDHRGLPLALVSTEGAT---------EWCA 246 VE Y ++ D T G W Sbjct: 1263 RTREIVEHNDSSLYTTAYSYDVLGQLTSILDDKGNTISTAYDTLGRKTQMVHPDMGTWTY 1322 Query: 247 EYDEWGNLLNEENPHQLQQLIRL 269 YD GNL ++ + Sbjct: 1323 SYDANGNLTSQTDAKSQVVNFTY 1345 >UniRef50_Q39VL5 YD repeat protein n=2 Tax=Geobacter metallireducens GS-15 RepID=Q39VL5_GEOMG Length = 2294 Score = 176 bits (446), Expect = 2e-42, Method: Composition-based stats. Identities = 78/434 (17%), Positives = 122/434 (28%), Gaps = 74/434 (17%) Query: 7 IARDAHYLYRYDRHGRLTEKTDLIP------------EGVIRTDDERTHRYHYDSQHRLV 54 + Y YD RLT TD I +T Y YD+ +R+ Sbjct: 1799 LDSLGTTTYGYDDANRLTSTTDPRGFAIGYDRDANGNISRITYPGNKTVSYTYDALNRIK 1858 Query: 55 HYTRTQYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKP-------------Q 101 T + Y YD GR + + + +R Sbjct: 1859 TVTIDWLN---KTATYTYDDAGRMLDLTHFNNTYTRYTHDNANRLTALENRLSNAGSPIA 1915 Query: 102 VTWYGWDGDRLTTIQND------------------------RTRIQTIYQPGSFTPLIRV 137 + DG+ T T + + L Sbjct: 1916 TYAFTLDGNGNRTGVTQTVPIALNATASNTNFTMNLQKNRLAQAGSTSFTYDNEGQLATR 1975 Query: 138 ET-----ATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSEE 192 S++ + G + V + + +LA+ Sbjct: 1976 TGDIYTFDDAHRLTNITGSVSYQYKYDGAGNRLEATRNGVTTRYIYDANGNLLAEADGTN 2035 Query: 193 SRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWG 252 + G + M + + YH D G +AL Y +G Sbjct: 2036 AITRYYIYGNGLLAMV-------ASGNQPYCYHFDATGHTVALTDAGANVVNRYAYTPFG 2088 Query: 253 NLLNEENPHQLQQLIRLPGQQ--YDEESGLYYNRHRYYDPLQGRYITQDPIGLKGG-WNF 309 + N++ + Q + G+ E +G YY R RYYD GR+I++DP G GG N Sbjct: 2089 AIGNQQ--ETISQPFKYVGKYGVMSEPNGFYYMRARYYDASVGRFISEDPKGFDGGDVNL 2146 Query: 310 YQYP-LNPVQYIDSMGL--ASKYGHLNNGGYGARPNKPPT--PDPSKLPDIAKQLRLPYP 364 Y NPV ID GL K +L N G + + + A Q Sbjct: 2147 MVYVGNNPVMLIDPNGLSAFGKIWNLPNTLLGLAWGGIGMLGGAHASIGNNAIQFEKHPF 2206 Query: 365 IDQASSAPNVFKTF 378 + A + N Sbjct: 2207 MFGAITLGNTISYA 2220 Score = 63.3 bits (152), Expect = 2e-08, Method: Composition-based stats. Identities = 61/481 (12%), Positives = 113/481 (23%), Gaps = 74/481 (15%) Query: 12 HYLYRYDRHGRLTEKTDLIPE-----------GVIRTDDERTHRYHYDSQHRLVHYTRTQ 60 + Y D LT TD + + Y YD+ HR++ + Sbjct: 1446 DFTYTGDL---LTSVTDKAGRSVAYGYTGTDLTTYTDPEGKVWTYGYDTSHRILTLKNPR 1502 Query: 61 YAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRT 120 + YD G+ ++ + R+ T + + I+ D T Sbjct: 1503 TVTTVTNV---YDAFGQVQSQTMPRQTGTATYNLYF-------------NGYRNIEEDGT 1546 Query: 121 RIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVF----------- 169 QTIY L+ VE G+ + ++ + Sbjct: 1547 GHQTIYHFDEQKHLLGVENTLGQRTTRYYDGQGHVVAETDPRGFSTGYLYDGNHNLTRVT 1606 Query: 170 ----PPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYH 225 + + D + + + V+ +K + Sbjct: 1607 DPFIRYTDTTYDSQFRLTDVTDPLGHTTHTDYDTKHHPVKTTVYPATGQSIYTQKSYY-- 1664 Query: 226 CDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEESGLYYNRH 285 GL G D +GN + G Sbjct: 1665 --ANGLVNTTTDGRG-VITTLTQDTYGNPATSKTSTAPAITYVYDG-------------- 1707 Query: 286 RYYDPLQGRYITQDPIGLKGGWNFYQYP--LNPVQYIDSMGLASKYGHLNNGGYGARPNK 343 GR + +G + Y P D + + + ++G + ++ Sbjct: 1708 ------IGRMTSL--TDQEGAKTSFTYDKRSLPTGSTDPLTKNTSLTYYDDGTLWTKTDR 1759 Query: 344 PPTPDPSKLPDIAKQLRLPYPIDQASSAPNVFKTFFRALSPYDYTLYCRKWVKPNLTCTP 403 K + Y + + + T LT T Sbjct: 1760 NGKTTTFTYTPTGKTNSIAYAGGTSVTYTYDQDDNLTKMLDSLGTTTYGYDDANRLTSTT 1819 Query: 404 QDDSQYPGMDTKTASDYLPQTNWPTTQLPPGYTCAEPYLFPDINKPDGPATAGIDDLGEI 463 G D + T + Y I+ + AT DD G + Sbjct: 1820 DPRGFAIGYDRDANGNISRITYPGNKTVSYTYDALNRIKTVTIDWLNKTATYTYDDAGRM 1879 Query: 464 L 464 L Sbjct: 1880 L 1880 Score = 62.1 bits (149), Expect = 4e-08, Method: Composition-based stats. Identities = 32/276 (11%), Positives = 53/276 (19%), Gaps = 44/276 (15%) Query: 13 YLYRYDRHGRLTEKTDLIPEGVIRTDDERT------------HRYHYDSQHRLVHYTRTQ 60 Y YD GR+T TD T D+R+ Y L T Sbjct: 1701 ITYVYDGIGRMTSLTDQEGAKTSFTYDKRSLPTGSTDPLTKNTSLTYYDDGTLWTKTDRN 1760 Query: 61 YAE-----------------PLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVT 103 Y YD G+ +R T Sbjct: 1761 GKTTTFTYTPTGKTNSIAYAGGTSVTYTYDQDDNLTKMLDSLGTTTY-GYDDANRLTSTT 1819 Query: 104 W-------YGWDGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTL 156 Y D + + Y + + V T A + Sbjct: 1820 DPRGFAIGYDRDANGNISRITYPGNKTVSYTYDALNRIKTVTIDWLNKTATYTYDDAGRM 1879 Query: 157 QQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYT 216 + + L LE+ + + + + + Sbjct: 1880 LDLTHFNNTYTRYTHDNANRLTALENRLSNAGSPIATYAFTLDGNGNRTGVTQTVPIALN 1939 Query: 217 PARKIHLYHCDHR-------GLPLALVSTEGATEWC 245 + + + G EG Sbjct: 1940 ATASNTNFTMNLQKNRLAQAGSTSFTYDNEGQLATR 1975 Score = 61.0 bits (146), Expect = 1e-07, Method: Composition-based stats. Identities = 65/443 (14%), Positives = 107/443 (24%), Gaps = 82/443 (18%) Query: 17 YDRHGRLTEKTDLIPEGVIR-------------TDDERTHRYHYDSQHRLVHYTRTQYAE 63 YD G++ +T G YH+D Q L+ + Sbjct: 1511 YDAFGQVQSQTMPRQTGTATYNLYFNGYRNIEEDGTGHQTIYHFDEQKHLLGV---ENTL 1567 Query: 64 PLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQ 123 +RY YD G VA+ + T Y +DG+ T D Sbjct: 1568 GQRTTRY-YDGQGHVVAETDP--------------RGFSTGYLYDGNHNLTRVTDPFIRY 1612 Query: 124 TIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESE 183 T S L V G T + ++ + G ++ + + Sbjct: 1613 TDTTYDSQFRLTDVTDPLGHTTHTDYDTKHHPVKTTVYPATGQSIYTQKSYYANGLVNTT 1672 Query: 184 ILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATE 243 V + T T Y D G +L EGA Sbjct: 1673 TDGRGVITTLTQDTYGNPAT----------SKTSTAPAITYVYDGIGRMTSLTDQEGAKT 1722 Query: 244 WCAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEESGLYYNRHRYYDPLQGRYITQD---- 299 YD P + + + L YYD + D Sbjct: 1723 -SFTYD------KRSLPTGSTDPLT-------KNTSLT-----YYDDGT-LWTKTDRNGK 1762 Query: 300 -------------PIGLKGGWN-FYQY--PLNPVQYIDSMGLASK-YGHLNNGGYGARPN 342 I GG + Y Y N + +DS+G + Y N P Sbjct: 1763 TTTFTYTPTGKTNSIAYAGGTSVTYTYDQDDNLTKMLDSLGTTTYGYDDANRLTSTTDPR 1822 Query: 343 KPPTPDPSKLPDIAKQLRLPYPIDQASSAPNVFKTFFRALSPYDYTLYCRKWVKPNLTCT 402 ++ P + + + + + + T + Sbjct: 1823 GFAIGYDRDANGNISRITYPGNKTVSYTYDALNRIKTVTIDWLNKTATYTYDDAGRMLDL 1882 Query: 403 PQDDSQYPGMDTKTASDYLPQTN 425 ++ Y A+ N Sbjct: 1883 THFNNTYTRYTHDNANRLTALEN 1905 >UniRef50_D0LPS9 YD repeat protein n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LPS9_HALO1 Length = 3456 Score = 176 bits (446), Expect = 2e-42, Method: Composition-based stats. Identities = 69/396 (17%), Positives = 118/396 (29%), Gaps = 73/396 (18%) Query: 8 ARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERT-HRYHYDSQHRLVHYTRTQYAEPLV 66 Y YD G + + +P RT + YD +RL + T + P Sbjct: 2886 GEFQRLEYGYDNVGNVLSLVNDVPNARPNEYGGRTEQSFSYDDLYRLTGASGTWHQPPNK 2945 Query: 67 ESRYLY----DPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWD------------GD 110 ++Y Y D + AK R+ +++ +G+D GD Sbjct: 2946 RNQYTYTMQYDDIHNIRAKEQRHWIRNRGDGKDITQHKTTYAWGYDYGSEKPHAATHVGD 3005 Query: 111 RLTTIQNDRTRIQTIYQPGSFTP--------LIRVETATGELAKTQRRSLADTLQQSGGE 162 R ++ ++ + +R + G + + +SG + Sbjct: 3006 RTFFYDDNGNQVGWDHDQNGLRRTIVWDEENRVRSISDNGRTTDFVYDHGGERVVKSGAQ 3065 Query: 163 DGGSVVFP--------------PVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQ 208 V V + S A +E G E Sbjct: 3066 GETVYVNDKWTVRNRSVGTKHVYVGTTRIASKLSPGDAHVRPDERDLVSVMLGKWWEHRS 3125 Query: 209 NQM--------------------DPVYTPARKIHLYHCDHRGLPLALVSTEGATEWCAEY 248 D ++ YH DH G + +GA +Y Sbjct: 3126 ENGHEHGRNVEMNPHYQIPSDLPDDGMPDTNFLYFYHPDHIGSTSFVTDVDGALYEHVQY 3185 Query: 249 DEWGNLLNEENPHQLQQLIRLPGQQYDEESGLYYNRHRYYDPLQGRYITQDPIGLK---- 304 G ++ + + G++ D+E+GLYY RYYDP G + + DP + Sbjct: 3186 FPSGETWVDQRTNTERTPHLFSGKELDQETGLYYFGARYYDPRVGLWASADPAQTEYLDG 3245 Query: 305 ---GG----WNF--YQY-PLNPVQYIDSMGLASKYG 330 GG N Y Y NP++++D G Sbjct: 3246 AGVGGVFMPINLATYTYAANNPIRFVDPDGRYWLDW 3281 Score = 62.9 bits (151), Expect = 3e-08, Method: Composition-based stats. Identities = 46/329 (13%), Positives = 73/329 (22%), Gaps = 66/329 (20%) Query: 2 WPDNRIARDAHYLYRYDR----------HGRLTEKTD--LIPEGVIRTDDERTHRYHYDS 49 + D R Y YD G LT + D YD+ Sbjct: 2640 YLDGR---GITTRYEYDPLQQIRRVFDAEGNLTRSEYDLAGRRTDVVHPDSGLTEMVYDA 2696 Query: 50 QHRLVHYTRTQYAEPLVESRYLYD----------------------------PLGRRVAK 81 LV Y YD G +V + Sbjct: 2697 AGNLVRRITANLRREGGAIEYGYDFTHLTEIRYPRYADNDVTYTWGTAGLRGAGGNQVGR 2756 Query: 82 RVWRRERDLTGWMSLSRKPQVT--WYGWDGDRLTTIQNDRTRIQTIYQPGSFTPLIRVET 139 V + +V D + N T Y ++ L ++ Sbjct: 2757 IVRVDDNSGFQEQRYGALGEVVFERRSIDSHTMGESDNSPEIYVTQYLYDTWGRLQQMIY 2816 Query: 140 ATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSEESRRWLAS 199 E+ S L ++ F + DR + + + + Sbjct: 2817 PDTEVLTYAYDSGG--LVRAAEGVKLGTQFRYLSRLEYDRFSQRVFQETGNGIRSHYAYD 2874 Query: 200 CGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVST---------EGATEWCAEYDE 250 + + Y D+ G L+LV+ G TE YD+ Sbjct: 2875 AENRRLRTLEAGEFQRLE------YGYDNVGNVLSLVNDVPNARPNEYGGRTEQSFSYDD 2928 Query: 251 WGNLLNEEN----PHQLQQLIRLPGQQYD 275 L P + Q D Sbjct: 2929 LYRLTGASGTWHQPPNKRNQYTYTMQYDD 2957 Score = 52.9 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 38/281 (13%), Positives = 66/281 (23%), Gaps = 37/281 (13%) Query: 16 RYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYLYDPL 75 YD +G + D G D RY RL D Sbjct: 2283 DYDGYGNVIALYDAGGPGAS-DDYRAEIRYT----GRLSACRAHHIVGVADRIEVR-DAA 2336 Query: 76 GRRVAKRVW-------RRERDLTGWMSLSRKPQVTWYGWDGDRLTTI-------QNDRTR 121 G + +R T +DGD + R + Sbjct: 2337 GALLRQRESDVACGDATGNVRQLRVSLEGAAVAQTDLAYDGDGNLRAVTAPPNHRGQRYQ 2396 Query: 122 IQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLE 181 + Y T ++R + + G A ++ + +G SV R+ Sbjct: 2397 LDYTYDSDVATYVVRTDDSFGYYATSEYDLRFGAPLRETDINGNSVTSSYDAFGRAHRVS 2456 Query: 182 SEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHC--DHRGLPLALVSTE 239 +R + + + V V+ A D G + Sbjct: 2457 GPYELERGLAYAIEFGYAPDAAVPFATTAHMDVFRNAADPIETVTFVDGLGRVTQ-TKKD 2515 Query: 240 GA--------------TEWCAEYDEWGNLLNEENPHQLQQL 266 G +D WG + + P + + Sbjct: 2516 GTLHRGVDAPAEDVMIVSGRTLHDPWGRAIAQWFPTEEPKN 2556 Score = 47.1 bits (110), Expect = 0.002, Method: Composition-based stats. Identities = 33/294 (11%), Positives = 56/294 (19%), Gaps = 46/294 (15%) Query: 17 YDRHGRLTE--------KTDLIPEGVIRTDDERT--HRYHYDSQHRLVHYTRTQYAEPLV 66 +D GR K D + + D YD R + L Sbjct: 2538 HDPWGRAIAQWFPTEEPKNDALNQAFKAEADGSAPPTEMRYDVLDRTLETVIPDG--TLT 2595 Query: 67 ESRYLY----------------DPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGD 110 Y D R R L + T Y +D Sbjct: 2596 SQSYALASALSGNGLWLLTTTIDAEDNRGDAYRDARGNIRAVVEYLDGRGITTRYEYDPL 2655 Query: 111 RLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLA---DTLQQSGGEDGGSV 167 + D T + V L + + + + +GG++ Sbjct: 2656 QQIRRVFDAEGNLTRSEYDLAGRRTDVVHPDSGLTEMVYDAAGNLVRRITANLRREGGAI 2715 Query: 168 VFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCD 227 + + + + + + W + Q Sbjct: 2716 EYGYDFTHLTEIRYPRYADN---DVTYTWGTAGLRGAGGNQVGRIVRVDDNSGFQEQRYG 2772 Query: 228 HRGLPL-----------ALVSTEGAT-EWCAEYDEWGNLLNEENPHQLQQLIRL 269 G + YD WG L P Sbjct: 2773 ALGEVVFERRSIDSHTMGESDNSPEIYVTQYLYDTWGRLQQMIYPDTEVLTYAY 2826 Score = 41.7 bits (96), Expect = 0.064, Method: Composition-based stats. Identities = 31/253 (12%), Positives = 61/253 (24%), Gaps = 29/253 (11%) Query: 21 GRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYL---YDPLGR 77 GR+ T + + HRY + AE + YD G Sbjct: 2242 GRVLTPTQAARAASVFPALVQEHRY------------HHEGAEDAFIHTFTTQDYDGYGN 2289 Query: 78 RVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQPGSFTPLIRV 137 +A + + R R I RI+ + L+R Sbjct: 2290 VIALYDAGGPGASDDYRAEIRYTGRLS----ACRAHHIVGVADRIEVR---DAAGALLRQ 2342 Query: 138 ETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSEESRRWL 197 + + G + + + + + + Sbjct: 2343 RESDVACGDATGNVRQLRVSLEGAAVAQTDLAYDGDGNLRAVTAPPNHRGQRYQLDYTYD 2402 Query: 198 ASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNE 257 + V + + T + G PL G + YD +G Sbjct: 2403 SDVATYVVRTDDSFGYYATSEYDLRF------GAPLRETDINGNSVTS-SYDAFGRAHRV 2455 Query: 258 ENPHQLQQLIRLP 270 P++L++ + Sbjct: 2456 SGPYELERGLAYA 2468 >UniRef50_C7BMQ9 Insecticial toxin complex n=1 Tax=Photorhabdus asymbiotica subsp. asymbiotica ATCC 43949 RepID=C7BMQ9_PHOAA Length = 953 Score = 176 bits (446), Expect = 2e-42, Method: Composition-based stats. Identities = 62/373 (16%), Positives = 115/373 (30%), Gaps = 48/373 (12%) Query: 4 DNRIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERT--HRYHYDSQHRLVHYTRTQY 61 D R+ Y YD G + + + + + Y YDS ++L T + Sbjct: 315 DTRL--LQDLRYEYDPVGNVINTRNSTEATRFWRNQKVVPKNTYTYDSLYQLTEATGREM 372 Query: 62 AEPLVESR--------------------YLYDPLGRRVAKRVWRRE--RDLTGWMSLSRK 99 + ++ Y YD G + T +++S + Sbjct: 373 TNIVRQNHQLPSPVLPTDNNTYTKYIRTYTYDRGGNLTQIQHNSSAIKGSYTKRITVSNR 432 Query: 100 PQV--------------TWYGWDGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELA 145 T + G++ T T Q T + + Sbjct: 433 SNRAVPSELTDNPMQVDTLFDAGGNQNTLTPGYHLDWNTRGQLQQVTLAAQRNSINHNKE 492 Query: 146 KTQRRSLADTLQQSGGEDGGSVVFPPVLVQM--LDRLESEILADRVSEESRRWLASCGLT 203 S L + + + ++ + L+ ++ + + G Sbjct: 493 WYHYGSDGTRLLKVNEQLTQYSIQQQRVIYLPQLELRTTQNDQNITENLQVITIGEAGRA 552 Query: 204 -VEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQ 262 V + + P ++ + + G + +G EY +G Q Sbjct: 553 QVRVLHWEKPPTDIKNNQVRYSYDNFTGSSQLELDDKGRITSQEEYYPFGGTSLWATKDQ 612 Query: 263 LQQLI---RLPGQQYDEESGLYYNRHRYYDPLQGRYITQDPIGLKGGWNFYQYP-LNPVQ 318 ++ R G++ D +GLYY +RYY P GR+++ DP G G N Y+ NPV Sbjct: 613 IEANYKFIRYSGKERDA-TGLYYYGYRYYQPWVGRWLSADPAGTTDGVNLYRMVRNNPVT 671 Query: 319 YIDSMGLASKYGH 331 D GL + H Sbjct: 672 LHDPDGLTPEQWH 684 Score = 43.6 bits (101), Expect = 0.017, Method: Composition-based stats. Identities = 31/195 (15%), Positives = 55/195 (28%), Gaps = 13/195 (6%) Query: 27 TDLIPEGVIRTDDERTHRYHYDSQHR-LVHYTRTQYAEP--LVESRYLYDPLGRRVAKRV 83 + + + Y Y+ + + L+ T + ++ L + RY YDP+G + R Sbjct: 278 SAAGQKLQEEHGNGVITEYTYEPETQHLISITMRRTSDTRLLQDLRYEYDPVGNVINTRN 337 Query: 84 WRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGE 143 + K Y +D T R + Q P + T Sbjct: 338 STEATRFWRNQKVVPKN---TYTYDSLYQLTEATGREMTNIVRQNHQL-PSPVLPTDNNT 393 Query: 144 LAKTQRRSLADT------LQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSEESRRWL 197 K R D +Q + GS + +R L D + + Sbjct: 394 YTKYIRTYTYDRGGNLTQIQHNSSAIKGSYTKRITVSNRSNRAVPSELTDNPMQVDTLFD 453 Query: 198 ASCGLTVEQMQNQMD 212 A +D Sbjct: 454 AGGNQNTLTPGYHLD 468 >UniRef50_Q6MNG4 Putative uncharacterized protein n=1 Tax=Bdellovibrio bacteriovorus RepID=Q6MNG4_BDEBA Length = 442 Score = 176 bits (445), Expect = 2e-42, Method: Composition-based stats. Identities = 62/342 (18%), Positives = 111/342 (32%), Gaps = 24/342 (7%) Query: 17 YDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYLYDPLG 76 YD + + + + Y +DS RL + Y YD Sbjct: 18 YDLILNRDAMGRIDGKTQVMNAVTDNYVYTFDSTGRLTQ----TNKNSATVATYSYDSNS 73 Query: 77 RRVAKRVWRRERDLTGWMSLSRKP-QVTWYGWDGDR-LTTIQNDRTRIQTIYQPGSFTPL 134 R + + T + ++ + L T N T T Y F L Sbjct: 74 NRNGGTIGAQPTTATYDDQDRLLTYNTLSFTYNANGDLLTKTNSVTSTTTQYVYDVFGNL 133 Query: 135 IRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSEESR 194 +V +G + + +L + ++ L + ++ Sbjct: 134 TQVTLPSGAVITYEIDALNRRTGKLVNGVVQKRWIYMDQYRIAAEL------NAAGTITK 187 Query: 195 RWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVS-TEGATEWCAEYDEWGN 253 R++ + + + + DH G P +V ++G ++DE+G Sbjct: 188 RFIYASKGNIPDY-------MIASGVKYRIISDHLGSPRLVVKQSDGTVIQRMDHDEYGR 240 Query: 254 LLNEENPHQLQQLIRLPGQQYDEESGLYYNRHRYYDPLQGRYITQDPIGLKGGW-NFYQY 312 ++ + NP L G YD ++ L R YD GR+ ++DPI KGG N Y Y Sbjct: 241 VIADTNPGYL--PFGFAGGLYDHQTSLVRFGARDYDSEVGRWTSKDPILFKGGDSNLYGY 298 Query: 313 P-LNPVQYIDSMGLASKYGHLNNGGYGARPNKPPTPDPSKLP 353 +PV ++D GL + + + T L Sbjct: 299 VLNDPVNFVDPNGLMVISISWGSSFFASNSPGSATGKSGSLS 340 Score = 48.7 bits (114), Expect = 4e-04, Method: Composition-based stats. Identities = 38/264 (14%), Positives = 65/264 (24%), Gaps = 36/264 (13%) Query: 5 NRIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEP 64 +R+ + Y+ +G L KT+ + T +Y YD L T A Sbjct: 93 DRLLTYNTLSFTYNANGDLLTKTNSVTST--------TTQYVYDVFGNLTQVTLPSGA-- 142 Query: 65 LVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQT 124 Y D L RR K V + +M D R+ N I Sbjct: 143 --VITYEIDALNRRTGKLVNGVVQKRWIYM-------------DQYRIAAELNAAGTITK 187 Query: 125 IYQPGSFT--PLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLES 182 + S P + + + + + + +++ Sbjct: 188 RFIYASKGNIPDYMIASGVKYRIISDHLGSPRLVVKQSDGTVIQRMDHDEYGRVIADTNP 247 Query: 183 EILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCD------HRGLPLALV 236 L + S + + +T I D P+ V Sbjct: 248 GYLPFGFAGGLYDHQTSLVRFGARDYDSEVGRWTSKDPILFKGGDSNLYGYVLNDPVNFV 307 Query: 237 STEGATEWCAEYDEWGNLLNEENP 260 G WG+ N Sbjct: 308 DPNGLMVISIS---WGSSFFASNS 328 >UniRef50_C7BJB9 Insecticidal toxin complex TccC n=1 Tax=Photorhabdus asymbiotica subsp. asymbiotica ATCC 43949 RepID=C7BJB9_PHOAA Length = 926 Score = 176 bits (445), Expect = 2e-42, Method: Composition-based stats. Identities = 58/363 (15%), Positives = 116/363 (31%), Gaps = 50/363 (13%) Query: 10 DAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERT--HRYHYDSQHRLVHYTRTQYAEPLVE 67 LY YD G + + + + + + Y YDS ++L+ T + A+ + Sbjct: 323 LQDLLYEYDPVGNIVSILNRAEATHFWRNQKVSPRNTYTYDSLYQLIQSTGREMADIGQQ 382 Query: 68 ----------------------SRYLYDPLGRRV--AKRVWRRERDLTGWMSLSRKPQVT 103 Y YD R T +++S + Sbjct: 383 NNKMPTPLVPLSSDDKVYTTYTRTYSYDRGNNLTKIQHRAPASHNIYTTEITVSNRSNRA 442 Query: 104 --------------WYGWDGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQR 149 + G +++ + T + R +AT + Sbjct: 443 VLSHNGLTPREVDAQFDASGHQISLPTGQNLSWNQRGELQQATTINRDNSATDREW-YRY 501 Query: 150 RSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSEESRRWLA----SCGLTVE 205 + + + + + G+ + + + + E + + Sbjct: 502 NAGSARILKVSEQQTGNSTQQQQVTYLPGLELRTTKSGTNTTEDLQVITMVETERTQVRI 561 Query: 206 QMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQ 265 + P ++ + + + + T+G EY +G +Q++ Sbjct: 562 LHWSAGKPNDIANNQVRYSYDNLIESNVMELDTKGKIISQEEYYPYGGTAIWTARNQIEA 621 Query: 266 LI---RLPGQQYDEESGLYYNRHRYYDPLQGRYITQDPIGLKGGWNFYQYP-LNPVQYID 321 R G++ D+ +GLYY RHRYY P GR+++ DP G G N Y+ NP++Y D Sbjct: 622 SYKTVRYSGKERDK-TGLYYYRHRYYQPWLGRWLSADPAGTVDGLNLYRMVKNNPIRYQD 680 Query: 322 SMG 324 G Sbjct: 681 ESG 683 >UniRef50_D0KWY8 YD repeat protein n=1 Tax=Halothiobacillus neapolitanus c2 RepID=D0KWY8_HALNC Length = 1338 Score = 176 bits (445), Expect = 2e-42, Method: Composition-based stats. Identities = 83/395 (21%), Positives = 128/395 (32%), Gaps = 60/395 (15%) Query: 12 HYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRT------------ 59 Y YD G + D RYHYD + L+ Sbjct: 602 DARYLYDDLGNILAVQHQ----GRLVGDVTQSRYHYDMHNELIEAQYGHGSVLVRSGGSS 657 Query: 60 -------QYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWY---GWDG 109 Q + RYL D R+ + ++ +P G+D Sbjct: 658 HRKKWVAQAPKDARSWRYLLDGNANRLYVQQDSTASQPATTQTIRYQPNSQRLAGAGYDA 717 Query: 110 DRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVF 169 + + + + L + E+A+ + + + + + G Sbjct: 718 NGQIQAIDSLQI-----RWNAEGRLQSLWNGAHEIARYRYNATGERVAKIVDSRSGHSKE 772 Query: 170 PPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVY-------------- 215 L ++++ A WL + V P+ Sbjct: 773 TLYLYDQQRHRQAKLDAAGHILRQYFWLGDKLVAVVDYPEGRKPLGNQEPDTFNKLNQYI 832 Query: 216 ----------TPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENP---HQ 262 T + +I +H G P+A + W A Y +G L+ + Sbjct: 833 GYLWGGSLVHTGSGRISYLLDNHLGAPIAATDAQAQVIWRAHYGPYGQQLDVADSLVKDH 892 Query: 263 LQQLIRLPGQQYDEESGLYYNRHRYYDPLQGRYITQDPIGLKGGWNFYQYP-LNPVQYID 321 +R PGQ D+ESGLYYN HRYYDP GRY++ DP+GL GG N Y Y NP+ Y D Sbjct: 893 FSLSLRNPGQWQDKESGLYYNDHRYYDPATGRYLSPDPLGLAGGLNAYAYVAANPIAYTD 952 Query: 322 SMGLA-SKYGHLNNGGYGARPNKPPTPDPSKLPDI 355 GL + NNG G T + + D Sbjct: 953 PYGLMLFAFDGTNNGAPGHLVPGNDTSNVYRFYDA 987 Score = 74.5 bits (181), Expect = 9e-12, Method: Composition-based stats. Identities = 46/274 (16%), Positives = 82/274 (29%), Gaps = 37/274 (13%) Query: 14 LYRYDRHGRLTEKTDLIPEG---------------VIRTDDERTHRYHYDSQHRLVHYTR 58 Y YD GR++ TD + + YD+Q+RL+ +R Sbjct: 129 RYTYDAAGRISAVTDPDGITMHIDDNYFGRPEKVLRQVAGGGQGWSFQYDAQNRLIQVSR 188 Query: 59 TQYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLT-TIQN 117 ++ + R YD GR + + + Y +G L+ +++ Sbjct: 189 VDGSQERPQDRMAYDSAGRLLWQATALGTL------------KQASYDTEGHVLSGSVRT 236 Query: 118 DRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLAD-TLQQSGGEDGGSVVFPPVLVQM 176 Y LI V TG + Q + + F L + Sbjct: 237 AGHEQSERYGYDDRGRLIFVSDGTGSTYRLQYTKNGQLQSVINPLGQITRLAFDVALHPV 296 Query: 177 LDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALV 236 ++ R SR + +++Q P T D G +A+ Sbjct: 297 SVTTAADTRLARTVSVSRNHAEQSLTVMPALKDQQAPTVTTRT-----LKDDFGRIVAIT 351 Query: 237 STE-GATEWCAEYDEWGNLLNEENPHQLQQLIRL 269 S G T YD+ L+ + N + + Sbjct: 352 SPNSGETT--YRYDDDNRLIRKTNALGQARHYQY 383 Score = 58.7 bits (140), Expect = 5e-07, Method: Composition-based stats. Identities = 35/221 (15%), Positives = 54/221 (24%), Gaps = 31/221 (14%) Query: 9 RDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVES 68 YRYD RL KT+ + + Y YD RL+ TQ V Sbjct: 354 NSGETTYRYDDDNRLIRKTNAL---------GQARHYQYDVAGRLIRQYTTQGTGHAVPE 404 Query: 69 RYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTI--------QNDRT 120 T + Q T YG++ T Q Sbjct: 405 S-------------TTTYRYTGTRLVETIDPAQTTRYGYNQWGQLTAKTVVLHSHQGTEI 451 Query: 121 RIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRL 180 T Y L G L + R + DG S ++ + L Sbjct: 452 TATTNYAYDRQGRLATKTLPDGSLLRYLRDGQGQ-IVSMQWRDGLSGPTRTLVSHLKRDL 510 Query: 181 ESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKI 221 + +W S + ++ + + Sbjct: 511 GGLAALTYGNGIQAKWQRSKAGVLARIVYSLPDEPGQTSQT 551 Score = 54.0 bits (128), Expect = 1e-05, Method: Composition-based stats. Identities = 38/279 (13%), Positives = 67/279 (24%), Gaps = 44/279 (15%) Query: 13 YLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQY----------- 61 + +DR G + + + RY YD+ R+ T Sbjct: 106 TQFEWDRGG--------SHVVKLTSPLQLVARYTYDAAGRISAVTDPDGITMHIDDNYFG 157 Query: 62 ---------AEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRL 112 A + YD R + ++ R Y G L Sbjct: 158 RPEKVLRQVAGGGQGWSFQYDAQNRLIQVSRVDGSQE--------RPQDRMAYDSAGRLL 209 Query: 113 TTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPV 172 T Q Y V TA E ++ L G + Sbjct: 210 WQATALGTLKQASYDTEGHVLSGSVRTAGHEQSERYGYDDRGRLIFVSDGTGSTYRLQYT 269 Query: 173 LVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLP 232 L + + + R L + D + H + Sbjct: 270 KNGQLQSVIN------PLGQITRLAFDVALHPVSVTTAADTRLARTVSVSRNHAEQSLTV 323 Query: 233 L-ALVSTEGATEWCAEY-DEWGNLLNEENPHQLQQLIRL 269 + AL + T D++G ++ +P+ + R Sbjct: 324 MPALKDQQAPTVTTRTLKDDFGRIVAITSPNSGETTYRY 362 Score = 53.3 bits (126), Expect = 2e-05, Method: Composition-based stats. Identities = 43/282 (15%), Positives = 69/282 (24%), Gaps = 48/282 (17%) Query: 4 DNRIAR-----DAHYLYRYDRHGRLTEKTDLIPEGVIRTDD-----------------ER 41 DNR+ R Y+YD GRL + G + + Sbjct: 365 DNRLIRKTNALGQARHYQYDVAGRLIRQYTTQGTGHAVPESTTTYRYTGTRLVETIDPAQ 424 Query: 42 THRYHYDSQHRLVHYT----RTQYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLS 97 T RY Y+ +L T Q E + Y YD GR K + Sbjct: 425 TTRYGYNQWGQLTAKTVVLHSHQGTEITATTNYAYDRQGRLATKTLPDGSLLRYLRDGQG 484 Query: 98 RKPQVTWYGWDG-----DRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSL 152 + + W DG L + G+ + + + + SL Sbjct: 485 QIVSMQW--RDGLSGPTRTLVSHLKRDLGGLAALTYGNGIQ-AKWQRSKAGVLARIVYSL 541 Query: 153 ADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMD 212 D Q+ + + + + + N + Sbjct: 542 PDEPGQTSQTASSDSRRVAWDHWLGWLVSPVKADEPPASSQTNSAWPGAYGIPVEPNTLW 601 Query: 213 PVYTPARKIHLYHCDHRGLPLALVSTEGATE-----WCAEYD 249 Y D G LA+ +G YD Sbjct: 602 DAR--------YLYDDLGNILAVQ-HQGRLVGDVTQSRYHYD 634 Score = 52.1 bits (123), Expect = 4e-05, Method: Composition-based stats. Identities = 37/267 (13%), Positives = 68/267 (25%), Gaps = 16/267 (5%) Query: 11 AHYLYRYDRHGRLTEKTDLIPEG--VIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVES 68 Y YD GRL +D + T + + + ++ P+ + Sbjct: 241 QSERYGYDDRGRLIFVSDGTGSTYRLQYTKNGQLQS-VINPLGQITRLAFDVALHPVSVT 299 Query: 69 RYLYDPLGRRVAKRVWRRERDLTGWMSL-------SRKPQVTWYGWDGDRLTTIQNDRTR 121 R+A+ V +++ T D Sbjct: 300 T----AADTRLARTVSVSRNHAEQSLTVMPALKDQQAPTVTTRTLKDDFGRIVAITSPNS 355 Query: 122 IQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLE 181 +T Y+ LIR A G+ Q +A L + G P Sbjct: 356 GETTYRYDDDNRLIRKTNALGQARHYQYD-VAGRLIRQYTTQGTGHAVPESTTTYRYTGT 414 Query: 182 SEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGA 241 + ++ +R G + T Y D +G +G+ Sbjct: 415 RLVETIDPAQTTRYGYNQWGQLTAKTVVLHSHQGTEITATTNYAYDRQGRLATKTLPDGS 474 Query: 242 TEWCAEYDEWGNLLNEENPHQLQQLIR 268 D G +++ + L R Sbjct: 475 LL-RYLRDGQGQIVSMQWRDGLSGPTR 500 >UniRef50_A5L0D2 Rhs family protein-like protein n=2 Tax=Vibrionales RepID=A5L0D2_9GAMM Length = 2343 Score = 175 bits (443), Expect = 3e-42, Method: Composition-based stats. Identities = 60/337 (17%), Positives = 92/337 (27%), Gaps = 37/337 (10%) Query: 10 DAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESR 69 Y YD G + K I Y YD RL + + R Sbjct: 1721 LRDIHYTYDERGNVLSKVSAIR--------NEQESYQYDDFDRLTQWHYSDNRSVAQVER 1772 Query: 70 -YLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQP 128 Y YD G K + + S V Y +D + RT Sbjct: 1773 DYRYDVYGNLTYKTGQGQ------FDVKSNGQLVGDYTYDANGNMVSGRGRTI-----AW 1821 Query: 129 GSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADR 188 SF + G +A+ + S + ++Q + P S + Sbjct: 1822 NSFNKAKHIN-DNGAVAQYEYGSERERVKQMSDGVTTYYISP-----EYQLEVSTNADGK 1875 Query: 189 VSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWCAEY 248 R + V + + + +H D G + G + Y Sbjct: 1876 AVTTMRHRFMADNQAVAEHVKTLIGSEKQIDRTAYFHRDALGTADLITDPNGQVQIERGY 1935 Query: 249 DEWGNLLNEENPHQLQQL-----IRLPGQQYDEE-SGLYYNRHRYYDPLQGRYITQDPI- 301 +G LL G + SGL R YDP GR+++ D Sbjct: 1936 TPFGELLASAELQATPMFTNAEMRGFTGHENVGNSSGLINMNARLYDPAIGRFLSADTFV 1995 Query: 302 ---GLKGGWNFYQYP-LNPVQYIDSMGLASKYGHLNN 334 +N Y Y NP++Y D G + Sbjct: 1996 PEPSFSQSYNRYAYVYNNPLKYTDPTGHWVWWAAAMA 2032 Score = 59.4 bits (142), Expect = 2e-07, Method: Composition-based stats. Identities = 33/249 (13%), Positives = 59/249 (23%), Gaps = 48/249 (19%) Query: 10 DAHYLY----RYDRHGRLTEKTDLIPEGVIRTDDERTHRYHY--------------DSQH 51 Y YD GR T +T + R + Sbjct: 1170 AGDTTYWLQTTYDGLGRPTTQTQPTEDVGDLVATTRYQGLTATITGPGTFEKVEQTNGLG 1229 Query: 52 RLVHYTRTQYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDR 111 + V RY YD +G VT +D Sbjct: 1230 QTVQI----VENSQSTLRYTYDAVGNLTQ---------------TDANGLVTELSYDQLG 1270 Query: 112 LTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPP 171 T D Y ++ L+ + A G+ +L + ++ ++ + Sbjct: 1271 YKTKMIDPAMGTWTYGHNAWGELVWQQDAKGQRTTFSYDALGRKINETRPDEINQWQYD- 1329 Query: 172 VLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGL 231 L+ + A RR+ + M +D + Y + G Sbjct: 1330 ------QSLKGGLDASSSDSSQRRYTYDALGRTQSMTLSIDG----SEYTTYYEYNEEGR 1379 Query: 232 PLALVSTEG 240 + G Sbjct: 1380 LSRVTFPSG 1388 Score = 58.3 bits (139), Expect = 7e-07, Method: Composition-based stats. Identities = 43/282 (15%), Positives = 69/282 (24%), Gaps = 42/282 (14%) Query: 4 DNRIARDAHYLYRYDRH-GRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYA 62 + ++ + + YD + G L E+T + T ++ Y++ T Sbjct: 960 NGHDSQTRNTTFSYDANTGALVEQTVEPGHALS-----LTTQFDYNASGFRTLERTTGSG 1014 Query: 63 EPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRI 122 E + LYD LGR + T + + P D + L T Sbjct: 1015 ETRQSTT-LYDALGRVIKHTNALGHFVTTTYNNSCGLPDTVT---DANGLVT-------- 1062 Query: 123 QTIYQPGSFTPLIRVETATGELAKTQR---RSLADTLQQSGGEDGGSVVFPPVLVQMLDR 179 + + I+ G + L Q G G VF Sbjct: 1063 --RFAYDDYCREIKKTLPDGNWVEQVYEWSDGADAGLDQHGLTLGDRSVFMVTTQTSQGG 1120 Query: 180 LESEILADRVSEESRRWLASCGLTVEQMQNQMD------------PVYTPARKIHLYHC- 226 L + E + L G TV + Y + Sbjct: 1121 LSTTYFDRLGREVRTKQLNGDGKTVMVDKAYDTRGLLVGETVPYFEGYFAGDTTYWLQTT 1180 Query: 227 -DHRGLPLALVSTE---GATEWCAEYDEWGNLLNEENPHQLQ 264 D G P G Y G P + Sbjct: 1181 YDGLGRPTTQTQPTEDVGDLVATTRYQ--GLTATITGPGTFE 1220 Score = 52.1 bits (123), Expect = 5e-05, Method: Composition-based stats. Identities = 22/162 (13%), Positives = 41/162 (25%), Gaps = 59/162 (36%) Query: 12 HYLYRYDRHGRLTEKTDLIPEGVIRTDD-------------------------------- 39 Y YD G LT+ + D Sbjct: 1241 TLRYTYDAVGNLTQTDANGLVTELSYDQLGYKTKMIDPAMGTWTYGHNAWGELVWQQDAK 1300 Query: 40 ERTHRYHYDSQHRLVHYTRTQYAEPLV-----------------ESRYLYDPLGRRVAKR 82 + + YD+ R ++ TR + RY YD LGR + Sbjct: 1301 GQRTTFSYDALGRKINETRPDEINQWQYDQSLKGGLDASSSDSSQRRYTYDALGRTQSMT 1360 Query: 83 VWRRERDLTGWMSLSRKPQVTWY----------GWDGDRLTT 114 + + T + + + +++ +D + L Sbjct: 1361 LSIDGSEYTTYYEYNEEGRLSRVTFPSGMNLDKDYDVNGLLK 1402 Score = 46.0 bits (107), Expect = 0.003, Method: Composition-based stats. Identities = 29/198 (14%), Positives = 56/198 (28%), Gaps = 15/198 (7%) Query: 71 LYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQPGS 130 +D G + V + G+ +L+ +T DG+ ++ + T YQ + Sbjct: 892 AWDTSGNLLTHTVTQ----YQGYDALNFPDTITRTVEDGNGERFVE----KTTTRYQHDT 943 Query: 131 FTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVS 190 LI S S + G++V V L ++ + Sbjct: 944 QRWLIGKPLDVSVTKSNGHDSQTRNTTFSYDANTGALVEQTVEPGHALSLTTQFDYNASG 1003 Query: 191 EESRRWLASCGLT---VEQMQNQMDPVYTPARKIHLY---HCDHRGLPLALVSTEGATEW 244 + G T + H + + GLP + G Sbjct: 1004 FRTLERTTGSGETRQSTTLYDALGRVIKHTNALGHFVTTTYNNSCGLPDTVTDANG-LVT 1062 Query: 245 CAEYDEWGNLLNEENPHQ 262 YD++ + + P Sbjct: 1063 RFAYDDYCREIKKTLPDG 1080 Score = 42.9 bits (99), Expect = 0.029, Method: Composition-based stats. Identities = 16/68 (23%), Positives = 21/68 (30%), Gaps = 10/68 (14%) Query: 9 RDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVES 68 + Y YD GR T + E T Y Y+ + RL T + Sbjct: 1342 DSSQRRYTYDALGRTQSMT------LSIDGSEYTTYYEYNEEGRLSRVTFPSGMNLDKD- 1394 Query: 69 RYLYDPLG 76 YD G Sbjct: 1395 ---YDVNG 1399 >UniRef50_B2K4S5 YD repeat protein n=62 Tax=Gammaproteobacteria RepID=B2K4S5_YERPB Length = 994 Score = 175 bits (443), Expect = 4e-42, Method: Composition-based stats. Identities = 71/441 (16%), Positives = 137/441 (31%), Gaps = 54/441 (12%) Query: 8 ARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERT--HRYHYDSQHRLVHYTRTQYAEPL 65 Y YD G + + T+ E + + + Y YDS ++LV T + A Sbjct: 327 KVLQDLRYEYDPVGNVLKVTNDAEETRFWRNQKVVPENTYTYDSLYQLVSATGREMANAG 386 Query: 66 VES----------------------RYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVT 103 +S Y YD G R + + ++ + Sbjct: 387 QQSCSLPSTTVPLPADSSAYTRYSRTYTYDEAGNLTQIRHNAPATNNSYTTKITVSDRSN 446 Query: 104 W----------------YGWDGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKT 147 + G + + TP++R + +T + Sbjct: 447 RGVLSTLTENAADVDALFTAGGQQTQLQPGQHLIWTARNELLKVTPVVR-DGSTDDSESY 505 Query: 148 QRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQM 207 + + + + + + + + ++ + + E + + Q+ Sbjct: 506 RYDAASQRILKVSRQKTNTSMQTQRVLYLPGLELRSTKSGDTETEGLQVITVGEAGRAQV 565 Query: 208 ----QNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQL 263 P +I + + G + +G EY +G + Sbjct: 566 RVLHWESGRPDEITDDQIRYSYDNLAGSCSLELGGDGNIISAEEYYPYGGTAVWAVRRAV 625 Query: 264 QQLI---RLPGQQYDEESGLYYNRHRYYDPLQGRYITQDPIGLKGGWNFYQYP-LNPVQY 319 + R G++ D +GLYY +RYY P GR+++ DP G+ G N ++ NPV + Sbjct: 626 EADYKTVRYSGKERDA-TGLYYYGYRYYQPWAGRWLSADPAGMVDGLNLFRMARNNPVAF 684 Query: 320 IDSMGLASKYGHLNNGGYGARPNK--PPTPDPSKLPDIAKQLRLPYPI--DQASSAPNVF 375 ID GL S+ + A P+ L + + P +A S+P Sbjct: 685 IDRNGLNSELLYSQAFKRTANKYNVIIGVRAPNPLGETLLKEGFPSKNFHMKAKSSPTGP 744 Query: 376 KTFFRALSPYDYTLYCRKWVK 396 F A P + + K Sbjct: 745 TAGFIAEDPIYSKVSPSAYKK 765 Score = 52.5 bits (124), Expect = 3e-05, Method: Composition-based stats. Identities = 73/438 (16%), Positives = 117/438 (26%), Gaps = 55/438 (12%) Query: 4 DNRIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQ-YA 62 DNR Y P+ T + TH YD++ L + + Sbjct: 16 DNRGLTVRDIAY------------HRHPDSPDVTSERITHH-QYDARGFLTQSADPRLHG 62 Query: 63 EPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRI 122 L+ YL D GR + + ++ + R D T + Sbjct: 63 AGLMNFSYLTDLTGRILRTQGADNGTTVSLNDATGRPFISASNISTSDDGTEDRGQAMTR 122 Query: 123 QTIYQ----PGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLD 178 Y+ PG + T + A+T + G+ V ++ Sbjct: 123 TWQYEEASLPGRLVSVTEQVTGKATRITERFVYAANTDAEKSLNLAGACVSHYDTAGLVQ 182 Query: 179 RLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARK------IHLYHCDHRGLP 232 S L +RR + S Q + L D G Sbjct: 183 PD-SIALTGVPLSVTRRLMKSADNPDAVADWQGADASAWNDQLDGETHTTLTTADATGAV 241 Query: 233 LALVSTEGATEWCAEYDEWG------NLLNEENPHQLQQLIRL--PGQQYDEESGLYYNR 284 L +G YD G L + + + + GQ+ EE G Sbjct: 242 LTTTDAKGNL-QRMAYDVAGLLSGSWLTLKDSTEQVIVKSLTYSAAGQKLREEHGNGVVT 300 Query: 285 HRYYDPLQGRYI---TQDPIGLKGGWN-----FYQYPLNPVQYIDSMGLASKYGHLNNGG 336 Y+P R + T+ P G G Y+Y D +G K + Sbjct: 301 TYEYEPETQRLVGIKTERPAGHASGAKVLQDLRYEY--------DPVGNVLKVTNDAEET 352 Query: 337 YGARPNKPPTPDPSKLPDIAKQLRLPYPIDQASSAPNVFKTFFRALS----PYDYTLYCR 392 R N+ P+ + D QL + A++ + YT Y R Sbjct: 353 RFWR-NQKVVPENTYTYDSLYQLVSATGREMANAGQQSCSLPSTTVPLPADSSAYTRYSR 411 Query: 393 KWVKPNLTCTPQDDSQYP 410 + Q P Sbjct: 412 TYTYDEAGNLTQIRHNAP 429 Score = 45.2 bits (105), Expect = 0.005, Method: Composition-based stats. Identities = 28/176 (15%), Positives = 52/176 (29%), Gaps = 14/176 (7%) Query: 27 TDLIPEGVIRTDDERTHRYHYDSQ-HRLVHYTRTQYAEPL------VESRYLYDPLGRRV 79 + + + Y Y+ + RLV + A + RY YDP+G + Sbjct: 284 SAAGQKLREEHGNGVVTTYEYEPETQRLVGIKTERPAGHASGAKVLQDLRYEYDPVGNVL 343 Query: 80 AKRVWRRERDLTGWMSLSRKPQVTWYGWDGD-RLTTIQN---DRTRIQTIYQPGSFTPLI 135 E + + Y +D +L + Q+ P + PL Sbjct: 344 KVTNDAEETRFWRNQKVVPEN---TYTYDSLYQLVSATGREMANAGQQSCSLPSTTVPLP 400 Query: 136 RVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSE 191 +A ++T A L Q + + + DR +L+ Sbjct: 401 ADSSAYTRYSRTYTYDEAGNLTQIRHNAPATNNSYTTKITVSDRSNRGVLSTLTEN 456 >UniRef50_UPI000174555B YD repeat protein n=2 Tax=Verrucomicrobium spinosum DSM 4136 RepID=UPI000174555B Length = 2265 Score = 174 bits (442), Expect = 4e-42, Method: Composition-based stats. Identities = 69/339 (20%), Positives = 112/339 (33%), Gaps = 32/339 (9%) Query: 11 AHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRY 70 A +L+ YD G +T +++ P R R+ YD+ +RL Q P++ + Y Sbjct: 1675 AQFLWTYDAVGNVTVQSERWPGEGTRGAGWRSTVMVYDATNRLTGEAMAQPGSPVITTGY 1734 Query: 71 LYDPLGRRVAKRVWRRERDLTGWMSLSR------------------KPQVTWYGWDGDR- 111 YD R K V R T + + Y G+R Sbjct: 1735 AYDTGSNRSVKLVSRDGSLTTKTLYTYNHFNQLADWSEEDGLGAVTRTAALTYDLAGNRA 1794 Query: 112 -LTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFP 170 T +++ T Y + L V E + + + G ++VF Sbjct: 1795 TQTLTTAEQSVQTTTYHWDAENRLEGVTLPNAEEHEYGYDYRTRRISRVENGIGTAIVFS 1854 Query: 171 PVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRG 230 L S + + M + + + RG Sbjct: 1855 GGL--------SVAEYESQGITPTVEYLRGPDMGGGVGGMMYSLRNGGTEAKYAMSNGRG 1906 Query: 231 LPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEESGLYYNRHRYYDP 290 +A + GA W A Y+ +G E + +Q R ++ D +GL RY D Sbjct: 1907 DVVAQSNDAGALTWTASYEAYGKRPVETGTNLDRQ--RANTKEEDP-TGLLNEGFRYRDI 1963 Query: 291 LQGRYITQDPIGLKGGWNFYQYPL-NPVQYIDSMGLASK 328 G ++++DP G G N Y Y NP D +GL Sbjct: 1964 ETGVWLSRDPAGFVDGPNLYAYVRQNPWTAFDPLGLEGT 2002 Score = 75.2 bits (183), Expect = 5e-12, Method: Composition-based stats. Identities = 42/272 (15%), Positives = 68/272 (25%), Gaps = 43/272 (15%) Query: 4 DNRIARDAH-----YLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTR 58 NR+ + YD++G T TD + + YD +RL+ T Sbjct: 1446 HNRLIETEDAEEQITTFGYDKNGNRTSVTD---------PRGKVTTFTYDDLNRLLKETF 1496 Query: 59 TQYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTW------------YG 106 + + R YD L R ++ G+ R TW Y Sbjct: 1497 QEG---VWTER-HYDAL-RETSREDSAGREFTFGYDLRDRLTTTTWTVGGSPVVRTRVYD 1551 Query: 107 WDGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGS 166 G + R Y + + ET G + G Sbjct: 1552 TAGRLTDVTETGRPEATVGYTYDALNRVA-TETTQGLTHTYTYDLGGRRTGSALGTGKTI 1610 Query: 167 VVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHC 226 + L E + + R +A N D + + Sbjct: 1611 ATTYDSQGKPLTVTEGGRTTVYHYDLASRAVAQTQPNGLWQYNAYDDLSRLESRQTYTSA 1670 Query: 227 DHRGLPLALVSTEGATEWCAEYDEWGNLLNEE 258 D + W YD GN+ + Sbjct: 1671 DAL---------QAQFLW--TYDAVGNVTVQS 1691 Score = 74.8 bits (182), Expect = 6e-12, Method: Composition-based stats. Identities = 54/390 (13%), Positives = 108/390 (27%), Gaps = 43/390 (11%) Query: 32 EGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYLYDPLGRRVAKRVWRRERDLT 91 + T + Y D+ R+ T + + Y Y G + R Sbjct: 1014 QSTTATGGDLVTEYTPDANGRVQKEAVTAGGGIELVTSYTYTGNGSKKTVTNPRGHTTTF 1073 Query: 92 GWMSLSRK----------PQVTWYGWDGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETAT 141 + + S + + Y G+ + + Y + V+ Sbjct: 1074 TYDAQSLRLTGVENPDSTTRTLGYDAHGNLTSEVNERGVTTTHEYDALNRRKKTIVDMDD 1133 Query: 142 GELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSEESRRWLAS-- 199 G ++ A L + + G+V + RL + + + ++ + + Sbjct: 1134 GADLVSETTYTALNLPHTETDPRGTVTTHT-YDGIGRRLTTTVGSGGDAQTTTCTYGANS 1192 Query: 200 CGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEEN 259 G + + + P K+ D P EG T YD+ GN ++ Sbjct: 1193 GGSVFDVSGFKPTTLTDPRGKVTTITYDDLYRPTVKQLPEGNTVTT-TYDDAGNPEEVKD 1251 Query: 260 PHQLQQLIRLPG-------QQYDEESGLYYNRHRYYDPLQGRYITQDPIGLKGGWNFYQY 312 G + D + RH YY P + D +G + Sbjct: 1252 ALNRITKTTFDGLNRPTQVEYPDATT-----RHSYYTPSGLVWKVVDELGRET------- 1299 Query: 313 PLNPVQYIDSMGLASKYGHLNNGGYGARPNKPPTPDPSKLPDIAKQLRLPYPIDQASSAP 372 + D G A + G + + ++ P + Sbjct: 1300 ----LTQYDRAGRAVEVTLPAVNGVSPVTKTAYDANGDVIA-----VQDPLGNIVTTVYD 1350 Query: 373 NVFKTFFRALSPYDYTLYCRKWVKPNLTCT 402 N + + SPY + +W +P + T Sbjct: 1351 NRNR-PTKVTSPYIWDALEGQWSRPEVNTT 1379 Score = 71.0 bits (172), Expect = 1e-10, Method: Composition-based stats. Identities = 57/402 (14%), Positives = 102/402 (25%), Gaps = 86/402 (21%) Query: 9 RDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHR-------------LVH 55 YD HG LT + + T + YD+ +R LV Sbjct: 1089 DSTTRTLGYDAHGNLTSEVNER---------GVTTTHEYDALNRRKKTIVDMDDGADLVS 1139 Query: 56 YT--------RTQYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGW 107 T T+ + + YD +GRR+ V T + + + Sbjct: 1140 ETTYTALNLPHTETDPRGTVTTHTYDGIGRRLTTTVGSGGDAQTTTCTYGANSGGSVFDV 1199 Query: 108 DGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSV 167 G + TT+ + R ++ TI + P ++ + T + + Sbjct: 1200 SGFKPTTLTDPRGKVTTITYDDLYRPTVKQLPEGNTVTTTYDDAGNPEEVKDALNRITKT 1259 Query: 168 VFPPVLV--------------QMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDP 213 F + + D + E+ G VE ++ Sbjct: 1260 TFDGLNRPTQVEYPDATTRHSYYTPSGLVWKVVDELGRETLTQYDRAGRAVEVTLPAVNG 1319 Query: 214 VYTPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRL---P 270 V + + D G +A+ G YD N P ++ Sbjct: 1320 VSPVTKTAY----DANGDVIAVQDPLGNIVTTV-YD------NRNRPTKVTSPYIWDALE 1368 Query: 271 GQQYDEESGLYYNRHRYYDPLQGRYITQDPIGLKGGWNFYQYPLNPVQYIDSMGLASKYG 330 GQ E Y GG N + D +G + Sbjct: 1369 GQWSRPEVNTTY--------------------DAGG--------NVLTVTDPLGKVTTKT 1400 Query: 331 HLNNGGYGARPNKPPTPDPSKLPDIAKQLRLPYPIDQASSAP 372 + N G N S + +++ + Sbjct: 1401 YNNAGWGLTVTNALGQVTASTYDRNGNVKTVTDALNRVVTNT 1442 Score = 65.2 bits (157), Expect = 5e-09, Method: Composition-based stats. Identities = 39/255 (15%), Positives = 69/255 (27%), Gaps = 28/255 (10%) Query: 10 DAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESR 69 + + YD RLT T + + YD+ RL T + P Sbjct: 1519 GREFTFGYDLRDRLTTTTWTVGGSPVVRTR------VYDTAGRLTDVT--ETGRPEATVG 1570 Query: 70 YLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQV---------TWYGWDGDRLTTIQNDRT 120 Y YD L RVA + + R+ T Y G LT + RT Sbjct: 1571 YTYDAL-NRVATETTQGLTHTYTYDLGGRRTGSALGTGKTIATTYDSQGKPLTVTEGGRT 1629 Query: 121 RIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSV--VFPPVLVQMLD 178 +Y + + G L+ + ++ F + + Sbjct: 1630 T---VYHYDLASRAVAQTQPNGLWQYNAYDDLSRLESRQTYTSADALQAQFLWTYDAVGN 1686 Query: 179 RLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKI----HLYHCDHRGLPLA 234 W ++ + + + + P + + Y + Sbjct: 1687 VTVQSERWPGEGTRGAGWRSTVMVYDATNRLTGEAMAQPGSPVITTGYAYDT-GSNRSVK 1745 Query: 235 LVSTEGATEWCAEYD 249 LVS +G+ Y Sbjct: 1746 LVSRDGSLTTKTLYT 1760 Score = 51.7 bits (122), Expect = 6e-05, Method: Composition-based stats. Identities = 38/278 (13%), Positives = 69/278 (24%), Gaps = 54/278 (19%) Query: 6 RIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTH--------------RYH----- 46 ++ YD G E D + T D Y Sbjct: 1229 QLPEGNTVTTTYDDAGNPEEVKDALNRITKTTFDGLNRPTQVEYPDATTRHSYYTPSGLV 1288 Query: 47 --------------YDSQHRLVHYTRTQYAEPLVESRYLYDPLGRRVAKRVWRRERDLTG 92 YD R V T ++ YD G +A + T Sbjct: 1289 WKVVDELGRETLTQYDRAGRAVEVTLPAVNGVSPVTKTAYDANGDVIAVQDPLGNIVTTV 1348 Query: 93 WMSLSRKPQVTW-YGWDGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRS 151 + + +R +VT Y WD ++ +R + + ++ V G++ + Sbjct: 1349 YDNRNRPTKVTSPYIWDA-----LEGQWSRPEVNTTYDAGGNVLTVTDPLGKVTTKTYNN 1403 Query: 152 LADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQM 211 L V + S + + L + N++ Sbjct: 1404 AGWGL--------------TVTNALGQVTASTYDRNGNVKTVTDALNRVVTNTYDIHNRL 1449 Query: 212 DPVYTPARKIHLYHCDHRGLPLALVSTEGATEWCAEYD 249 +I + D G ++ G YD Sbjct: 1450 IETEDAEEQITTFGYDKNGNRTSVTDPRGKVT-TFTYD 1486 Score = 44.8 bits (104), Expect = 0.007, Method: Composition-based stats. Identities = 33/223 (14%), Positives = 55/223 (24%), Gaps = 31/223 (13%) Query: 4 DNRIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAE 63 D A YD G +T E + +T YH+D+++RL T Sbjct: 1774 DGLGAVTRTAALTYDLAGNRATQTLTTAEQSV-----QTTTYHWDAENRLEGVTLPN--- 1825 Query: 64 PLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTI-------- 115 E Y YD RR+++ + LS V Y G T Sbjct: 1826 -AEEHEYGYDYRTRRISRVENGIGTAIVFSGGLS----VAEYESQGITPTVEYLRGPDMG 1880 Query: 116 ----------QNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGG 165 +N T + G + + A + ++G Sbjct: 1881 GGVGGMMYSLRNGGTEAKYAMSNGRGDVVAQSNDAGALTWTASYEAYGKRPVETGTNLDR 1940 Query: 166 SVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQ 208 E D + + + + Sbjct: 1941 QRANTKEEDPTGLLNEGFRYRDIETGVWLSRDPAGFVDGPNLY 1983 >UniRef50_A9EVR3 Conserved carbohydrate-binding protein, Rhs family n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=A9EVR3_SORC5 Length = 1367 Score = 174 bits (442), Expect = 5e-42, Method: Composition-based stats. Identities = 76/345 (22%), Positives = 112/345 (32%), Gaps = 45/345 (13%) Query: 6 RIARDA-HYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEP 64 R+ + D GR + + D R Y + + ++ Sbjct: 913 RLLPGGVELQWDRDIAGRPLARRTTRVDSGAARLDAR--AYEWRGEDQIAAIVDAARG-- 968 Query: 65 LVESRYLYDPLGRRVAKRVWRRERD--------------------LTGWMSLSRKPQVTW 104 + +D GR +++R R + G + Sbjct: 969 --ARTFEHDRAGRLLSERSPRGDVARPLRRFSADELAEERASARFGPGSRVIDHAGVRYT 1026 Query: 105 YGWDGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQS----G 160 Y G RL T + D + + L RVE G A + + A + G Sbjct: 1027 YDAAG-RLQTKERDG--RRWSFHWNGHGLLRRVELPDGRAALFEYDAFARRTAKRIVRCG 1083 Query: 161 GEDGGSVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARK 220 V + L EI + W GL + + + Sbjct: 1084 SSGEEVVDSETRFLWDGHTLLHEI---SIKHGLTTWYWEPGLFAPVARERG-------GQ 1133 Query: 221 IHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEESGL 280 + DH G P L T G W AE D G E+ R PGQ D E+GL Sbjct: 1134 VWSVIPDHLGAPTTLFDTSGVQVWAAETDTLGRTAVEQGA-PEDCPWRWPGQYEDPETGL 1192 Query: 281 YYNRHRYYDPLQGRYITQDPIGLKGGWNFYQYPLNPVQYIDSMGL 325 YYNR RYYDP G Y++ DP+GL G Y Y + + + D +GL Sbjct: 1193 YYNRFRYYDPDAGNYVSPDPLGLLAGTAEYAYAPDSLVWFDPLGL 1237 Score = 73.7 bits (179), Expect = 1e-11, Method: Composition-based stats. Identities = 52/302 (17%), Positives = 76/302 (25%), Gaps = 49/302 (16%) Query: 16 RYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYLYDPL 75 RYD G L E D + V R YD R V E R+ YD Sbjct: 547 RYDDRGNLIELADGVGSKV---------RLEYDRGGRPVRAVDALGG----EWRWEYDEN 593 Query: 76 GRRVAKRVWRRERDLTGWMS------LSRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQPG 129 G V + E W + +D + ++ Y+ Sbjct: 594 GSLVRRVNPLGEATYLTWDRGLLVALALPDRRKIHVEYDEHKEIREIRSGGSGKSTYERD 653 Query: 130 SFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSV--------------------VF 169 LI G + T + TL++ + Sbjct: 654 ERGRLIAARDPRGAVVTTAYDAEGRTLERRSRSGAAERHRYDPEGHLVEIDSDARRIKLE 713 Query: 170 PPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHL------ 223 +++ R E + LA+ EQ D A + Sbjct: 714 YGHFHRLVRRSEGGGEISFHYDSEGHLLAARNEYGEQYLFTYDASGNVATETRFSGGTWR 773 Query: 224 YHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEESGLYYN 283 Y D G A V G+ YD G L ++ R + D E N Sbjct: 774 YRRDAAGRVGAAVDPAGS-TSTMTYDAAGRLARVDHGDGTFLEFRY---RADGELEWAQN 829 Query: 284 RH 285 H Sbjct: 830 EH 831 Score = 70.6 bits (171), Expect = 1e-10, Method: Composition-based stats. Identities = 39/237 (16%), Positives = 64/237 (27%), Gaps = 30/237 (12%) Query: 3 PDNRIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYA 62 P +R+ A Y YD GRL + D R +H++ L Sbjct: 1013 PGSRVIDHAGVRYTYDAAGRL----------QTKERDGRRWSFHWNGHGLLRRVELPDGR 1062 Query: 63 EPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQN-DRTR 121 L + YD RR AKR+ R + T + WDG L + Sbjct: 1063 AAL----FEYDAFARRTAKRIVRCGSSGEEVV-----DSETRFLWDGHTLLHEISIKHGL 1113 Query: 122 IQTIYQPGSFTPLIRVETATG--------ELAKTQRRSLADTLQQSGGED-GGSVVFPPV 172 ++PG F P+ R T + + + + G + V Sbjct: 1114 TTWYWEPGLFAPVARERGGQVWSVIPDHLGAPTTLFDTSGVQVWAAETDTLGRTAVEQGA 1173 Query: 173 LVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHR 229 R + R+ + + + + Y D Sbjct: 1174 PEDCPWRWPGQYEDPETGLYYNRFRYYDPDAGNYVSPDPLGLLAGTAE-YAYAPDSL 1229 Score = 67.9 bits (164), Expect = 9e-10, Method: Composition-based stats. Identities = 39/246 (15%), Positives = 67/246 (27%), Gaps = 33/246 (13%) Query: 6 RIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPL 65 R Y D GRL D V YD++ R T + + Sbjct: 641 RSGGSGKSTYERDERGRLIAARDPRGAVVTT---------AYDAEGR----TLERRSRSG 687 Query: 66 VESRYLYDPLGRRV-----AKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRT 120 R+ YDP G V A+R+ + S + +D + + Sbjct: 688 AAERHRYDPEGHLVEIDSDARRIKLEYGHFHRLVRRSEGGGEISFHYDSEGHLLAARNEY 747 Query: 121 RIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRL 180 Q ++ + + +G + +R + + + G + L R Sbjct: 748 GEQYLFTYDASGNVATETRFSGGTWRYRRDAAG-RVGAAVDPAGSTSTMTYDAAGRLAR- 805 Query: 181 ESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEG 240 + + R+ A L Q ++ H D G LA V G Sbjct: 806 ---VDHGDGTFLEFRYRADGELEWAQNEHSETSC----------HRDAIGRILAEVQPAG 852 Query: 241 ATEWCA 246 Sbjct: 853 RVASTY 858 Score = 66.4 bits (160), Expect = 2e-09, Method: Composition-based stats. Identities = 46/266 (17%), Positives = 71/266 (26%), Gaps = 35/266 (13%) Query: 16 RYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYT--RTQYAEPLVESRYLYD 73 YD GRL D V +D + RLV + +Y YD Sbjct: 369 AYDARGRLEWVRDSAGRLVW---------LEHDDEDRLVALNLPLPRGRGFAAHRQYRYD 419 Query: 74 PLGRRVAKRVWRRERDLTGWMS------LSRKPQVTWYGWDGDR----LTTIQNDRTRIQ 123 G VA +++ R ++ +DG D Sbjct: 420 DQGDLVAVSDALGHEWRFEYVTHLLVRETDRNGLSFYFAYDGLGEDAFCVRTWGDGGIYD 479 Query: 124 TIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESE 183 Q + V + G + ++ + + GG+ + L+ Sbjct: 480 HRLQYDKRGRVTVVTDSLGNTTRY-YMNVVGLVTKIVDPLGGTTEYQVDPTT----LQRT 534 Query: 184 ILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATE 243 D R G +E V D G P+ V G Sbjct: 535 REVDPAGVAVERRYDDRGNLIELADGVGSKVR--------LEYDRGGRPVRAVDALGGE- 585 Query: 244 WCAEYDEWGNLLNEENPHQLQQLIRL 269 W EYDE G+L+ NP + Sbjct: 586 WRWEYDENGSLVRRVNPLGEATYLTW 611 Score = 63.7 bits (153), Expect = 2e-08, Method: Composition-based stats. Identities = 47/309 (15%), Positives = 76/309 (24%), Gaps = 61/309 (19%) Query: 3 PDNRIARDAHYLYRYDRHGRLTEKTDLIPEG-----------VIRTDDERTHRYHYDSQH 51 P R AH YRYD G L +D + + + + YD Sbjct: 405 PRGR-GFAAHRQYRYDDQGDLVAVSDALGHEWRFEYVTHLLVRETDRNGLSFYFAYDGLG 463 Query: 52 RLVHYTRTQYAEPLVESRYLYDPLGRRVAKRVW-----------------------RRER 88 RT + + R YD GR Sbjct: 464 EDAFCVRTWGDGGIYDHRLQYDKRGRVTVVTDSLGNTTRYYMNVVGLVTKIVDPLGGTTE 523 Query: 89 DLTGWMSLSRKPQVT--------WYGWDGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETA 140 +L R +V Y G+ D + + +R A Sbjct: 524 YQVDPTTLQRTREVDPAGVAVERRYDDRGN--LIELADGVGSKVRLEYDRGGRPVRAVDA 581 Query: 141 TGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSEESRRWLASC 200 G + + +++ + + L + L DR Sbjct: 582 LGGEWRWEYDENGSLVRRVNPLGEATYL-----TWDRGLLVALALPDR---RKIHVEYDE 633 Query: 201 GLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENP 260 + ++++ T Y D RG +A GA A YD G L + Sbjct: 634 HKEIREIRSGGSGKST-------YERDERGRLIAARDPRGAVVTTA-YDAEGRTLERRSR 685 Query: 261 HQLQQLIRL 269 + R Sbjct: 686 SGAAERHRY 694 >UniRef50_C8W2T8 YD repeat protein n=2 Tax=Desulfotomaculum acetoxidans DSM 771 RepID=C8W2T8_DESAS Length = 2349 Score = 174 bits (442), Expect = 5e-42, Method: Composition-based stats. Identities = 68/323 (21%), Positives = 114/323 (35%), Gaps = 54/323 (16%) Query: 12 HYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYL 71 Y Y Y G + TH + YD+ RL +T + V+ Y Sbjct: 1934 GYSYGYYADG----------TISGYSSWNGTHSFSYDADGRLASWTHS-----GVQQNYT 1978 Query: 72 YDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQPGSF 131 YD G + K + + ++T G+ D+ + D + Y Sbjct: 1979 YDAAGNLLTK--------GNRTFAYNNINEITSPGFTYDQNGNMTGDGS---FNYTYNPL 2027 Query: 132 TPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSE 191 L+RV + D +++ G+ + L R Sbjct: 2028 NQLVRVNKVSDGSLVATYTYNHDGTRRNKVTAQGTTNYNWDASGNLIREIG-------PN 2080 Query: 192 ESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLA--LVSTEGAT--EWCAE 247 + + + G + + ++++ H + RG ++ + G T E + Sbjct: 2081 GTYCYYYALGKLIA---------FENNHQLYIVHDNLRGDVISLSMTDDYGNTDQENRYD 2131 Query: 248 YDEWGNLLNEENPHQLQQLIRLPGQQYDEESGLYYNRHRYYDPLQGRYITQDPIGL---- 303 YD WG + E+ ++ R G YDEE+GLYY + RYY P GR++T+D Sbjct: 2132 YDPWGTPICED--ESVKLPFRYAGYYYDEETGLYYLKSRYYSPALGRFLTRDDHSFINHA 2189 Query: 304 -KGGWNFYQYP-LNPVQYIDSMG 324 N Y Y NPV Y+D G Sbjct: 2190 DPQTLNLYAYCGNNPVNYVDPDG 2212 Score = 74.8 bits (182), Expect = 7e-12, Method: Composition-based stats. Identities = 37/265 (13%), Positives = 68/265 (25%), Gaps = 23/265 (8%) Query: 9 RDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVES 68 ++ Y YDR G LT + ++ YD+ +RL + Sbjct: 1751 QNQSATYTYDRSGNLTGI---------ALPNGQSESLEYDNANRLTRIILSDG----KYY 1797 Query: 69 RYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTW-YGWDGDRLTTIQND-----RTRI 122 Y YD G ++ + R T +G+ + N+ Sbjct: 1798 NYYYDGAGELISVTDQNGAGCSWNYDGAHRVTSTTDPFGYQLNYSLDKSNNLELESGIDY 1857 Query: 123 QTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLES 182 Y + ++ R + +V + Sbjct: 1858 SCHYYYDGGNNMYKLYLPGA--IIYYGRDDQGRVFNVEYNPSYTVNHQLHYATSQRIINY 1915 Query: 183 EILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGAT 242 + S + + + G + + Y+ H + D G T Sbjct: 1916 LVNGWCSSIQDQYFPYRTGYSYGYYADGTISGYSSWNGTHSFSYDADG--RLASWTHSGV 1973 Query: 243 EWCAEYDEWGNLLNEENPHQLQQLI 267 + YD GNLL + N I Sbjct: 1974 QQNYTYDAAGNLLTKGNRTFAYNNI 1998 Score = 62.1 bits (149), Expect = 4e-08, Method: Composition-based stats. Identities = 36/258 (13%), Positives = 71/258 (27%), Gaps = 34/258 (13%) Query: 13 YLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYLY 72 Y YD GR+ D +++ Y Q+ L T ++ Y Sbjct: 1056 ITYTYDPVGRIVNVID---------PGGHAYQFGY--QNNLTSVTDPANNTYVL----SY 1100 Query: 73 DPLG---------RRVAKRVWRRERDLTGWMSLSRKPQ-----VTWYGWDGDRLTTIQND 118 D G RV L + Q + G+ + T D Sbjct: 1101 DANGHLASFTDPLNRVTTFNINSGGQLLSYNDARTNGQDVYTTTFSHSLQGNTMVTTITD 1160 Query: 119 RTRIQTIYQPG-SFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQML 177 Y S LI+ + G + T Q G+ + + + Sbjct: 1161 PGSRTNTYYHNTSTGNLIKKQDGIGNTWSYTWTNNNLTQAQDTK---GTTSYQYDNMGNM 1217 Query: 178 DRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVS 237 + + ++ + + + ++ + R+I+ + G L+ Sbjct: 1218 IQKTITVDSNPANNIVETMTYNSNSELLTRKDNSNYNNNNGREINYKYSSE-GNLLSTSD 1276 Query: 238 TEGATEWCAEYDEWGNLL 255 YD+ GN++ Sbjct: 1277 PNEKVSSSYSYDQRGNII 1294 Score = 60.2 bits (144), Expect = 2e-07, Method: Composition-based stats. Identities = 35/246 (14%), Positives = 67/246 (27%), Gaps = 49/246 (19%) Query: 15 YRYDRH-GRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYLYD 73 Y Y+ + G D + + T Y YD+ +RL+ T + Y YD Sbjct: 1665 YAYNPNVGNTVGHADPL--------NHITWYY-YDALNRLIQVTDPLSRKAY----YQYD 1711 Query: 74 PLGRRVAKRVWRRERDLTGWMSL--------------SRKPQVTWYGWDGDRLTTIQNDR 119 P+ + R R S + Q Y +D T Sbjct: 1712 PVSNLIYTRDPRSASSSDNTYSTFYGPNNLNRLSALTDSQNQSATYTYDRSGNLTGIALP 1771 Query: 120 TRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGG-----------SVV 168 + + L R+ + G+ + + + G + Sbjct: 1772 NGQSESLEYDNANRLTRIILSDGKYYNYYYDGAGELISVTDQNGAGCSWNYDGAHRVTST 1831 Query: 169 FPPVLVQMLDRLE--SEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHC 226 P Q+ L+ + + + + S + G + ++ I Y Sbjct: 1832 TDPFGYQLNYSLDKSNNLELESGIDYSCHYYYDGGNNMYKLYLPGA--------IIYYGR 1883 Query: 227 DHRGLP 232 D +G Sbjct: 1884 DDQGRV 1889 Score = 58.7 bits (140), Expect = 5e-07, Method: Composition-based stats. Identities = 31/241 (12%), Positives = 57/241 (23%), Gaps = 23/241 (9%) Query: 18 DRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYLYDPLGR 77 D++ + + + P I ++ T + YDS RL Y YDP+GR Sbjct: 1011 DKYKNIFKYINNKPYQFIDRNNNIT-TFSYDSSGRLYQVIDASGRP----ITYTYDPVGR 1065 Query: 78 RVAKRVWRRERDLTGWMS-----LSRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQPGSFT 132 V G+ + +D + D T + S Sbjct: 1066 IVNVIDPGGHAYQFGYQNNLTSVTDPANNTYVLSYDANGHLASFTDPLNRVTTFNINSGG 1125 Query: 133 PLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSEE 192 L+ A + + +LQ + + R + Sbjct: 1126 QLLSYNDARTNGQDVYTTTFSHSLQGN--------TMVTTITDPGSRTNTYYHNTSTGNL 1177 Query: 193 SRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRG-----LPLALVSTEGATEWCAE 247 ++ N + Y D+ G + Sbjct: 1178 IKKQDGIGNTWSYTWTNNNLTQAQDTKGTTSYQYDNMGNMIQKTITVDSNPANNIVETMT 1237 Query: 248 Y 248 Y Sbjct: 1238 Y 1238 Score = 48.3 bits (113), Expect = 6e-04, Method: Composition-based stats. Identities = 33/225 (14%), Positives = 56/225 (24%), Gaps = 38/225 (16%) Query: 5 NRIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEP 64 N I + YD++G +T + + Y Y+ ++LV + ++ Sbjct: 1996 NNINEITSPGFTYDQNGNMT--------------GDGSFNYTYNPLNQLVRVN--KVSDG 2039 Query: 65 LVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDR-LTTIQNDRTRIQ 123 + + Y Y+ G R K + T Y WD L Sbjct: 2040 SLVATYTYNHDGTRRNKVTAQ---------------GTTNYNWDASGNLIREIGPNGTYC 2084 Query: 124 TIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESE 183 Y L ++ S D + Sbjct: 2085 YYYA------LGKLIAFENNHQLYIVHDNLRGDVISLSMTDDYGNTDQENRYDYDPWGTP 2138 Query: 184 ILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDH 228 I D + R+ + Y+PA L DH Sbjct: 2139 ICEDESVKLPFRYAGYYYDEETGLYYLKSRYYSPALGRFLTRDDH 2183 Score = 47.1 bits (110), Expect = 0.001, Method: Composition-based stats. Identities = 18/113 (15%), Positives = 35/113 (30%), Gaps = 11/113 (9%) Query: 2 WPDNRIARDAHY----LYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYT 57 W +N + + Y+YD G + +KT + + Y+S L+ Sbjct: 1192 WTNNNLTQAQDTKGTTSYQYDNMGNMIQKTITVDS---NPANNIVETMTYNSNSELLTRK 1248 Query: 58 R--TQYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWD 108 E Y Y G ++ + + S ++ + Y D Sbjct: 1249 DNSNYNNNNGREINYKYSSEGNLLSTSDPNEKVSSS--YSYDQRGNIIQYNPD 1299 Score = 46.0 bits (107), Expect = 0.004, Method: Composition-based stats. Identities = 22/143 (15%), Positives = 44/143 (30%), Gaps = 25/143 (17%) Query: 21 GRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYLYDPLGRRVA 80 G L +K D I T Y + + + L T+ + Y YD +G + Sbjct: 1175 GNLIKKQDGIGN---------TWSYTW-TNNNLTQAQDTKG-----TTSYQYDNMGNMIQ 1219 Query: 81 KRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTI----QNDRTRIQTIYQPGSFTPLIR 136 K + + + Y + + LT N+ + Y+ S L+ Sbjct: 1220 KTITVDSNPANNIV------ETMTYNSNSELLTRKDNSNYNNNNGREINYKYSSEGNLLS 1273 Query: 137 VETATGELAKTQRRSLADTLQQS 159 +++ + + Q Sbjct: 1274 TSDPNEKVSSSYSYDQRGNIIQY 1296 Score = 42.5 bits (98), Expect = 0.040, Method: Composition-based stats. Identities = 16/123 (13%), Positives = 36/123 (29%), Gaps = 9/123 (7%) Query: 18 DRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVH--YTRTQYAEPLVESRYLYDPL 75 D G T D + T Y YD+ ++ T + Y+ Sbjct: 1182 DGIGNTWSYTWTNNNLTQAQDTKGTTSYQYDNMGNMIQKTITVDSNPANNIVETMTYNSN 1241 Query: 76 GRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQPGSFTPLI 135 + ++ + G + Y +G+ L + + ++ + Y +I Sbjct: 1242 SELLTRKDNSNYNNNNG------REINYKYSSEGN-LLSTSDPNEKVSSSYSYDQRGNII 1294 Query: 136 RVE 138 + Sbjct: 1295 QYN 1297 >UniRef50_Q3JM82 TccC3 n=4 Tax=Burkholderia pseudomallei RepID=Q3JM82_BURP1 Length = 989 Score = 174 bits (441), Expect = 6e-42, Method: Composition-based stats. Identities = 58/373 (15%), Positives = 93/373 (24%), Gaps = 53/373 (14%) Query: 5 NRIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERT--HRYHYDSQHRLVHYTRTQYA 62 R Y+YD G L D + Y YD+ ++L T + A Sbjct: 319 GRSPVVQALAYQYDPVGNLLAIDDAAQTTRHTRNQRVAPASGYTYDALYQLTRATGRENA 378 Query: 63 EPL----------------------VESRYLYDPLGRRVAKRVWRRERDL---------- 90 Y YD + Sbjct: 379 NAGRQSQALPPAIVPLFQETDALTNYTRTYRYDRGTNLIEIHHQGTTPYTQQMVVARTSN 438 Query: 91 ---TGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKT 147 L+ +++ G+ + Q ++R A + + Sbjct: 439 RAVPQTDGLTPGDVNSYFDACGNLRELGPGQPLTWDSRNQLQRTAQIVR-RGADDDYERY 497 Query: 148 QRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSEESRRWL---------- 197 + + + + R EES L Sbjct: 498 WYDGAGQRATKLNSARTSGTTRIERVRYLPGLELRQTEQARDGEESATPLEILQVLTLGA 557 Query: 198 ASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNE 257 A + P ++ D G + + + EY +G Sbjct: 558 AGRQSVRVLHWERGRPETIENDQLRYSLGDQVGSSMIELDAQADLLTREEYYPYGGTAVW 617 Query: 258 ENPHQLQQLI---RLPGQQYDEESGLYYNRHRYYDPLQGRYITQDPIGLKGGWNFYQYP- 313 ++ R Q+ D +GLYY RYY P R+I DP+G G N + Sbjct: 618 SARSDIEAKYKYVRYSDQERDA-TGLYYYGFRYYAPWLARWINPDPVGPIDGLNLFCMVG 676 Query: 314 LNPVQYIDSMGLA 326 NPV D GLA Sbjct: 677 NNPVTRKDVGGLA 689 Score = 54.8 bits (130), Expect = 6e-06, Method: Composition-based stats. Identities = 38/252 (15%), Positives = 68/252 (26%), Gaps = 53/252 (21%) Query: 2 WPDNRIARDAHYLYRYDRHGRLTEKTDLIPEGV--------------------------- 34 W + + + YD +GR E+TD Sbjct: 215 WGRDLLPDTYTSRWAYDAYGREIERTDARGNLQRLHYNIAGQLAASDLRLDGQTNWQPLL 274 Query: 35 -------------IRTDDERTHRYHYDSQ-HRL-----VHYTRTQYAEPLVESRYLYDPL 75 + Y Y+ Q RL +T + + Y YDP+ Sbjct: 275 RAITYSAAGQVQHEEAGNGVVTDYTYEPQTQRLAELRTTRAAQTGRSPVVQALAYQYDPV 334 Query: 76 GRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGD----RLTTIQNDRTRIQTIYQPGSF 131 G +A + T ++ Y +D R T +N Q+ P + Sbjct: 335 GNLLAIDDAAQTTRHTRNQRVAPASG---YTYDALYQLTRATGRENANAGRQSQALPPAI 391 Query: 132 TPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSE 191 PL + A +T R L + + V+ + +R + + Sbjct: 392 VPLFQETDALTNYTRTYRYDRGTNLIEIHHQGTTPYTQQMVVARTSNRAVPQTDGLTPGD 451 Query: 192 ESRRWLASCGLT 203 + + A L Sbjct: 452 VNSYFDACGNLR 463 Score = 46.0 bits (107), Expect = 0.003, Method: Composition-based stats. Identities = 42/274 (15%), Positives = 68/274 (24%), Gaps = 20/274 (7%) Query: 6 RIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPL 65 R R YD RL T+ +G +R + R Y A Sbjct: 117 RDGRGQQLSRIYDTLHRLVAVTEQAEDGAVR----VSERLVYGD------AAPPNGANLC 166 Query: 66 VESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQND--RTRIQ 123 R Y G + + W GD D Sbjct: 167 GRLRQHYTAAG-LNVIPAYSLAGQPLSNQQQFLRDDRLDSDWAGDDPAAWGRDLLPDTYT 225 Query: 124 TIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESE 183 + + ++ I A G L + ++A L S G + P+L + + Sbjct: 226 SRWAYDAYGREIERTDARGNL-QRLHYNIAGQLAASDLRLDGQTNWQPLLRAITYSAAGQ 284 Query: 184 ILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPAR----KIHLYHCDHRGLPLALVSTE 239 + + T + + R + Y D G LA+ Sbjct: 285 VQHEEAGNGVVTDYTYEPQTQRLAELRTTRAAQTGRSPVVQALAYQYDPVGNLLAIDDAA 344 Query: 240 GATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQ 273 T + L QL R G++ Sbjct: 345 QTTRHTRNQRV--APASGYTYDALYQLTRATGRE 376 >UniRef50_B1FCF5 YD repeat protein n=1 Tax=Burkholderia ambifaria IOP40-10 RepID=B1FCF5_9BURK Length = 2027 Score = 174 bits (440), Expect = 7e-42, Method: Composition-based stats. Identities = 82/448 (18%), Positives = 137/448 (30%), Gaps = 53/448 (11%) Query: 8 ARDAHYLYRYDRHGRLTEKT-----------DLIPEGVIRTDDERTH--RYHYDSQHRLV 54 A YRYD G +T+ D ++ T +Y YD+ +R Sbjct: 1571 AGGRTLSYRYDPAGNVTDVAWPDGFHVGIAYDGYGRPSQLLENGTTSLAKYSYDALNRRT 1630 Query: 55 HYTRTQYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQV----------TW 104 + Y YD G ++ + R W+S + Q+ Sbjct: 1631 RVDFGNG----TRTEYAYDNQG-WLSTQNHRFTSSAEDWLSSFTRNQLGDIKQSSVSNNR 1685 Query: 105 YGWDGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDG 164 YGW ++ Q G R T + A T L + L+ + Sbjct: 1686 YGWVPAAVSNTYATNALNQYTGVAGKAVRYDRNGNLTSDGAWTYTYDLDNRLKTASRSGT 1745 Query: 165 G-------------SVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQM 211 + + V + D + D + RR++ G+ +Q + Sbjct: 1746 SAALTYDPEGRLVKTSINGVDTVLLYDGQKLVGEYDGGGKLVRRYVFGPGIDEPLVQYEG 1805 Query: 212 DPVYTPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRLPG 271 + + + +G +A + GAT Y +G L G Sbjct: 1806 AGTAAKS----WLYANQQGSVVAQANGSGATTSSQAYGPFGET-----NGTLASRFGYTG 1856 Query: 272 QQYDEESGLYYNRHRYYDPLQGRYITQDPIGLKGGWNFYQYP-LNPVQYIDSMGLASKYG 330 QQY + GLYY + R Y P GR++ DP+G N Y Y NPV + D G+ + G Sbjct: 1857 QQYLAQLGLYYYKARMYSPSLGRFLQTDPVGTADDLNLYAYVKNNPVNFTDPTGMIAASG 1916 Query: 331 HLNNGGYGARPNKPPTPDPSKLP--DIAKQLRLPYPIDQASSAPNVFKTFFRALSPYDYT 388 + A P +P D + S+A + K + Sbjct: 1917 FASKSSAPAAAVSAPDQVAVSVPKLDAPTFSMQTAEDKKDSTAGSDIKIAADRGGMFACD 1976 Query: 389 LYCRKWVKPNLTCTPQDDSQYPGMDTKT 416 + + L P D ++ Sbjct: 1977 IISSECKGSVLREFPGQYLNSTLRDIQS 2004 Score = 66.0 bits (159), Expect = 3e-09, Method: Composition-based stats. Identities = 30/253 (11%), Positives = 61/253 (24%), Gaps = 29/253 (11%) Query: 14 LYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYLYD 73 Y +D +G L + R D +T +D+ +R + + + +Y YD Sbjct: 1492 QYAWDANGNLVTQ---------RKRDGQTVSQTFDALNR---VSTRTFPGGVGNVQYSYD 1539 Query: 74 PLGRRVAKRVWRRERDLTGWM-------SLSRKPQVTWYGWDGDRLTTIQNDRTRIQTIY 126 G + A + + +T S + Y +D T Sbjct: 1540 LRGLKTASQYSDGGQTVTNSYDGLGQLTQTSAGGRTLSYRYDPAGNVTDVAWPDGFHVGI 1599 Query: 127 QPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILA 186 + ++ + + +G + L + Sbjct: 1600 AYDGYGRPSQLLENGTTSLAKYSYDALNRRTRVDFGNGTRTEYAYDNQGWLSTQNHRFTS 1659 Query: 187 DRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLAL------VSTEG 240 S G + + + PA + Y + + G Sbjct: 1660 SAEDWLSSFTRNQLGDIKQSSVSNNRYGWVPAAVSNTYATNALNQYTGVAGKAVRYDRNG 1719 Query: 241 ATE----WCAEYD 249 W YD Sbjct: 1720 NLTSDGAWTYTYD 1732 Score = 60.6 bits (145), Expect = 1e-07, Method: Composition-based stats. Identities = 44/250 (17%), Positives = 72/250 (28%), Gaps = 46/250 (18%) Query: 5 NRIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEP 64 N+ A RYDR+G LT + Y YD +RL +R+ + Sbjct: 1703 NQYTGVAGKAVRYDRNGNLTS--------------DGAWTYTYDLDNRLKTASRSGTSAA 1748 Query: 65 LVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTR--I 122 L YDP GR V + + T +DG +L + + Sbjct: 1749 L-----TYDPEGRLVKTSINGVD---------------TVLLYDGQKLVGEYDGGGKLVR 1788 Query: 123 QTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVV------FPPVLVQM 176 + ++ PG PL++ E A + ++ G + F + Sbjct: 1789 RYVFGPGIDEPLVQYEGAGTAAKSWLYANQQGSVVAQANGSGATTSSQAYGPFGETNGTL 1848 Query: 177 LDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPAR-KIHLYHCDHRGLPLAL 235 R + A Q DPV T ++ Y + P+ Sbjct: 1849 ASRFGYTGQQYLAQLGLYYYKARMYSPSLGRFLQTDPVGTADDLNLYAYVKN---NPVNF 1905 Query: 236 VSTEGATEWC 245 G Sbjct: 1906 TDPTGMIAAS 1915 Score = 60.6 bits (145), Expect = 1e-07, Method: Composition-based stats. Identities = 39/260 (15%), Positives = 62/260 (23%), Gaps = 41/260 (15%) Query: 2 WPDNRIARDAH----------YLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQH 51 + D+R+ Y Y+ +G + TD + YD Sbjct: 1419 YADDRVKSVRKAVGTGLEQTYVSYAYNPNGTVATTTDAKGNTTVNL---------YDGHD 1469 Query: 52 RLVHYT-----RTQYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVT--- 103 RL R +Y +D G V +R + + +L+R T Sbjct: 1470 RLYRTHYPLEGRPGMGNANDFEQYAWDANGNLVTQRKRDGQTVSQTFDALNRVSTRTFPG 1529 Query: 104 -----WYGWDGDRL-TTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQ 157 Y +D L T Q L + T+ G + R A + Sbjct: 1530 GVGNVQYSYDLRGLKTASQYSDGGQTVTNSYDGLGQLTQ--TSAGGRTLSYRYDPAGNVT 1587 Query: 158 QSGGEDGGSVVFPPVLVQMLDRLESEILA------DRVSEESRRWLASCGLTVEQMQNQM 211 DG V +L R G E + Sbjct: 1588 DVAWPDGFHVGIAYDGYGRPSQLLENGTTSLAKYSYDALNRRTRVDFGNGTRTEYAYDNQ 1647 Query: 212 DPVYTPARKIHLYHCDHRGL 231 + T + D Sbjct: 1648 GWLSTQNHRFTSSAEDWLSS 1667 Score = 60.2 bits (144), Expect = 1e-07, Method: Composition-based stats. Identities = 31/258 (12%), Positives = 58/258 (22%), Gaps = 36/258 (13%) Query: 2 WPDNRIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQY 61 W + + R ++ GR T ++ RY YD + T + Sbjct: 977 WNGDVLTRVENH------AGRTLTLTYANDRLQSVASAQKIVRYAYDGNGNQISATDPEG 1030 Query: 62 AEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSL----------SRKPQVTWYGWDGDR 111 +R+ YD GR S Y + G+R Sbjct: 1031 ----FATRFEYDQPGRMTKFYQPSFPTVPVVTNVYDTLGRVKEQTSAAGNQYSYYFAGNR 1086 Query: 112 LTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPP 171 + + Y L++V G + + L + G + Sbjct: 1087 -SEEVGPGGTSRANY-IDGEGNLLQVSDPMGN-WTLKAYDGQNRLVRETYPGGNRSEYAY 1143 Query: 172 VLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGL 231 D + + + + G + + L Sbjct: 1144 DDATCGDTSSAFVRTCTHNVVTVTRYPRSGTGDPVLTERFAYDPRNN------------L 1191 Query: 232 PLALVSTEGATEWCAEYD 249 G +YD Sbjct: 1192 VSEATDARGNVT-RTKYD 1208 Score = 55.2 bits (131), Expect = 5e-06, Method: Composition-based stats. Identities = 32/275 (11%), Positives = 57/275 (20%), Gaps = 35/275 (12%) Query: 16 RYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVES-RYLY-- 72 YD H R + T + R Y + R+ + Y Y Sbjct: 1390 AYDDHHRPSRVTQYLSAA---DGGNRVTETAYYADDRVKSVRKAVGTGLEQTYVSYAYNP 1446 Query: 73 --------DPLGRRV------AKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQND 118 D G R++R L G + Y WD + Q Sbjct: 1447 NGTVATTTDAKGNTTVNLYDGHDRLYRTHYPLEGRPGMGNANDFEQYAWDANGNLVTQRK 1506 Query: 119 RTRIQTIYQPGSFTPLIRVETATG-ELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQML 177 R + + G + + G +V + Sbjct: 1507 RDGQTVSQTFDALNRVSTRTFPGGVGNVQYSYDLRGLKTASQYSDGGQTVTNSYDGL--- 1563 Query: 178 DRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVS 237 ++ + + V + D G P L+ Sbjct: 1564 ----GQLTQTSAGGRTLSYRYDPAGNVTDVAWPDGFHVG-------IAYDGYGRPSQLLE 1612 Query: 238 TEGATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQ 272 + YD + + + Q Sbjct: 1613 NGTTSLAKYSYDALNRRTRVDFGNGTRTEYAYDNQ 1647 Score = 44.0 bits (102), Expect = 0.012, Method: Composition-based stats. Identities = 40/353 (11%), Positives = 74/353 (20%), Gaps = 87/353 (24%) Query: 2 WPDNRIARDAHYLYRYDRH--------------GRLTEKTDLIPEGVIRTDDERTHRYHY 47 +P Y YD + T G T R+ Y Sbjct: 1133 YPGGN-----RSEYAYDDATCGDTSSAFVRTCTHNVVTVTRYPRSGTGDPV--LTERFAY 1185 Query: 48 DSQHRLVHYTRTQYAEPLVESRYLY----------------------------------- 72 D ++ LV + ++Y Y Sbjct: 1186 DPRNNLVSEATDARGN-VTRTKYDYVGVLSGSVRPAVNGLSPTTDISNFDVALPGKSRVR 1244 Query: 73 ---------DPLGR---RVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRT 120 D R R+ + VT + +G LT+ ++ Sbjct: 1245 LPMIITERIDAARRIAIRIEYAADHTPSTVIRDTGGQAVKTVTTFDDEGRLLTSKRDGAA 1304 Query: 121 RIQTIYQPGSFTPLIRVETA-TGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDR 179 I+ Y+ + R G + ++ GG++V M D Sbjct: 1305 TIR--YEYDKRDNVTRTNANLLGSDEVIGYDADGRETRRGVAIAGGAMVTCKRYNAMGDV 1362 Query: 180 LESEILADRVSEES------------RRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCD 227 + A + + + + + Y D Sbjct: 1363 VRVWGPAKTANVTTCPVEASPTPITDTAYDDHHRPSRVTQYLSAADGGNRVTETAYYADD 1422 Query: 228 HRGLPLALVSTEG--ATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEES 278 V G T Y+ G + + + G + Sbjct: 1423 RVKSVRKAV-GTGLEQTYVSYAYNPNGTVATTTDAKGNTTVNLYDGHDRLYRT 1474 Score = 42.5 bits (98), Expect = 0.035, Method: Composition-based stats. Identities = 47/301 (15%), Positives = 84/301 (27%), Gaps = 48/301 (15%) Query: 3 PDNR---IARDAHYLYRY-DRHGRLTEKTDLIPEGVIRTDDERTH------------RYH 46 NR + Y D G L + +D + ++ D + Y Sbjct: 1083 AGNRSEEVGPGGTSRANYIDGEGNLLQVSDPMGNWTLKAYDGQNRLVRETYPGGNRSEYA 1142 Query: 47 YDSQ--------------HRLVHYTR---TQYAEPLVESRYLYDPLGRRVAK-RVWRRER 88 YD H +V TR + +P++ R+ YDP V++ R Sbjct: 1143 YDDATCGDTSSAFVRTCTHNVVTVTRYPRSGTGDPVLTERFAYDPRNNLVSEATDARGNV 1202 Query: 89 DLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQ 148 T + + +G + D + S L + T + A+ Sbjct: 1203 TRTKYDYVGVLSGSVRPAVNG---LSPTTDISNFDVALPGKSRVRLPMIITERIDAARRI 1259 Query: 149 R----RSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTV 204 + T + GG V RL + + R + R+ V Sbjct: 1260 AIRIEYAADHTPSTVIRDTGGQAVKTVTTFDDEGRLLT---SKRDGAATIRYEYDKRDNV 1316 Query: 205 EQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQ 264 + + Y D R + GA C Y+ G+++ P + Sbjct: 1317 TRTNANLLGSDEVIG----YDADGRETRRGVAIAGGAMVTCKRYNAMGDVVRVWGPAKTA 1372 Query: 265 Q 265 Sbjct: 1373 N 1373 >UniRef50_Q2PC71 Putative uncharacterized protein Rub7 n=1 Tax=Streptomyces achromogenes subsp. rubradiris RepID=Q2PC71_STRAH Length = 1096 Score = 174 bits (440), Expect = 8e-42, Method: Composition-based stats. Identities = 66/331 (19%), Positives = 101/331 (30%), Gaps = 37/331 (11%) Query: 8 ARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVE 67 Y Y G + + DL+ + DS R+ T + A Sbjct: 725 QPLQRRAYTYSPDGSVAGRQDLLTGD---------RTFRLDSAGRVTAVTGRRDA---WS 772 Query: 68 SRYLYDPLGRR---------------VAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRL 112 +Y +DP G + + R G ++ Y G + Sbjct: 773 EQYDFDPAGNIVDALWPAPAAGSAAGTPETSAQGPRATDGTLTTRAGDIRYRYDAAGRVV 832 Query: 113 TTIQN--DRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFP 170 T + Y + + L V G + L + + G ++ Sbjct: 833 TRTRTRASGDPDTWRYAWDADSRLHSVTLPDGSTWQYHYDPLGRRIGKRHLAADGRLLGQ 892 Query: 171 PVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVY------TPARKIHLY 224 D L + + W V Q V + H Sbjct: 893 TQFTWDGDVLVEQEDRHGDCRKVTTWNYRNDSCVPLTQASRTVVRVDAEREETDEEFHSV 952 Query: 225 HCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEESGLYYNR 284 D G+P LVS +GA Y WG + +R PGQ D+E+GL+Y Sbjct: 953 VTDLNGMPTELVSPDGAVAGHQRYTWWGQSSWQHGTAT--TPLRFPGQYCDQETGLHYEN 1010 Query: 285 HRYYDPLQGRYITQDPIGLKGGWNFYQYPLN 315 RYYDP G Y++ DP+GL N + Y N Sbjct: 1011 QRYYDPEIGAYLSPDPLGLAPASNPHAYVPN 1041 Score = 70.6 bits (171), Expect = 1e-10, Method: Composition-based stats. Identities = 36/271 (13%), Positives = 63/271 (23%), Gaps = 27/271 (9%) Query: 13 YLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYLY 72 + YD G L+ + R+ YD RL +T Y + Sbjct: 194 RRFEYDDSGNLSGVVNSSGLP---------RRFTYDDMGRLTGWTDRNG----YSYHYTF 240 Query: 73 DPLGRRVAKRVWRRERDLTGWMSLSRK------PQVTWYGWDGDRLTTIQNDRTRIQTIY 126 D GR V T VT Y + D T Sbjct: 241 DSEGRCVRGEGPDGVLSGTFVYEPGVTRWTTTDGDVTTYAINESAHVVAVTDPIGKTTRT 300 Query: 127 QPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPV-------LVQMLDR 179 Q + + + + + + V+ Sbjct: 301 QYDERGRVTVRTDPLDRVTRHAYDERGNLVSVTDPAGHEYHVYVNDACLPERITAPDGTV 360 Query: 180 LESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTE 239 + + E S + + + + CD GLP+A+ Sbjct: 361 WLQDFDKNGNLTEQTAPDGSVLTYAYDSRGHLSRMTGADGAVTTIACDPAGLPVAVTKPT 420 Query: 240 GATEWCAEYDEWGNLLNEENPHQLQQLIRLP 270 G T E D+ G ++ + + Sbjct: 421 GETI-RYERDQLGRVVRVMSSDGGTTALTWT 450 Score = 60.6 bits (145), Expect = 1e-07, Method: Composition-based stats. Identities = 42/253 (16%), Positives = 62/253 (24%), Gaps = 39/253 (15%) Query: 16 RYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYA------------- 62 +D++G LTE+T D Y YDS+ L T A Sbjct: 364 DFDKNGNLTEQT---------APDGSVLTYAYDSRGHLSRMTGADGAVTTIACDPAGLPV 414 Query: 63 ----EPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVT-------WYGWDGDR 111 RY D LGR V W + T + WDG+ Sbjct: 415 AVTKPTGETIRYERDQLGRVVRVMSSDGGTTALTWTTDGLPTSRTLPDGSTDSWAWDGEE 474 Query: 112 LTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPP 171 + T T Y G F L+ + G + D + + + Sbjct: 475 NLQRRTSATGAVTSYAYGPFGQLMSITWPGGTRTELTY----DRSCRVTSVTQSGMTWEF 530 Query: 172 VLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGL 231 L ++ V ++ Y P K+ H G Sbjct: 531 ELESAGRLSAQTDYNGATTQYWYDAAGQLVHRVNASGHEASFAYNPLGKLAYSHT-AEGT 589 Query: 232 -PLALVSTEGATE 243 G Sbjct: 590 ETTFAHDPAGRLV 602 Score = 57.9 bits (138), Expect = 9e-07, Method: Composition-based stats. Identities = 42/322 (13%), Positives = 82/322 (25%), Gaps = 57/322 (17%) Query: 7 IARDAHYLYRYDRHGRLTE----------KTDLIPEGVIRTDDERTHRYHYDSQHRLVHY 56 A + +D GRL D + + + + RT YD+ R+ Sbjct: 585 TAEGTETTFAHDPAGRLVRAKNDDVDLVLVRDPLGRVITESCNGRTVTKTYDAAGRVTSR 644 Query: 57 TRTQYAEPLVES----------------RYLYDPLGRRVAK------------------- 81 A R+ +DP GR + Sbjct: 645 VTPSGASTSWSYDADGTPSLLTADGHELRFGHDPAGRETRRDLPGGVVLTQEWDHNGRLV 704 Query: 82 ----RVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQPGSFTPLIRV 137 G + + Q Y + D + D ++ S + V Sbjct: 705 TQALTGSAAASGPDGPVVTGQPLQRRAYTYSPDGSVAGRQDLLTGDRTFRLDSAGRVTAV 764 Query: 138 ETATGELAKTQRRSLADTLQQSGG--EDGGSVVFPPVLVQMLDRLESEILADRVSEESRR 195 ++ A + + GS P R L R + R Sbjct: 765 TGRRDAWSEQYDFDPAGNIVDALWPAPAAGSAAGTPETSAQGPRATDGTLTTRAGDIRYR 824 Query: 196 WLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLL 255 + A+ ++ + + Y D ++ +G+ W YD G + Sbjct: 825 YDAAG-----RVVTRTRTRASGDPDTWRYAWDADSRLHSVTLPDGS-TWQYHYDPLGRRI 878 Query: 256 NEENPHQLQQLIRLPGQQYDEE 277 + + +L+ +D + Sbjct: 879 GKRHLAADGRLLGQTQFTWDGD 900 Score = 48.7 bits (114), Expect = 4e-04, Method: Composition-based stats. Identities = 33/255 (12%), Positives = 67/255 (26%), Gaps = 42/255 (16%) Query: 53 LVHYTRTQYAEPLVESRYLYDPLGRRVAKRVWRR--------ERDLTGWMSLSRKPQVT- 103 LV T E + YD +GR ++ + +T R Q Sbjct: 136 LVSLTDRTGH----EITFSYDAVGRPLSITHSGGYRVLVTVTDERITALALAGRGGQDDI 191 Query: 104 ---WYGWDGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSG 160 + +D + + + + + L G S ++ G Sbjct: 192 PLRRFEYDDSGNLSGVVNSSGLPRRFTYDDMGRLTGWTDRNGYSYHYTFDSEGRCVRGEG 251 Query: 161 GED--GGSVVFPPVLVQ--MLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYT 216 + G+ V+ P + + D + + + T Q + Sbjct: 252 PDGVLSGTFVYEPGVTRWTTTDGDVTTYAINESAHVVAVTDPIGKTTRTQYDERGRVTVR 311 Query: 217 PA--RKIHLYHCDHRGLPLALVSTEGA--------------------TEWCAEYDEWGNL 254 ++ + D RG +++ G T W ++D+ GNL Sbjct: 312 TDPLDRVTRHAYDERGNLVSVTDPAGHEYHVYVNDACLPERITAPDGTVWLQDFDKNGNL 371 Query: 255 LNEENPHQLQQLIRL 269 + P Sbjct: 372 TEQTAPDGSVLTYAY 386 Score = 45.6 bits (106), Expect = 0.004, Method: Composition-based stats. Identities = 31/263 (11%), Positives = 58/263 (22%), Gaps = 37/263 (14%) Query: 7 IARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLV 66 + + + +D L +T Y Y +L+ T Sbjct: 460 LPDGSTDSWAWDGEENLQRRTSATGA---------VTSYAYGPFGQLMSITWP----GGT 506 Query: 67 ESRYLYDPLGRRVAKRVWRRERD------LTGWMSLSRKPQVTWYGWDGDRLTTIQNDRT 120 + YD R + + T Y +D + + + Sbjct: 507 RTELTYDRSCRVTSVTQSGMTWEFELESAGRLSAQTDYNGATTQYWYDAAGQLVHRVNAS 566 Query: 121 RIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRL 180 + + L TA G ++ LV + D L Sbjct: 567 GHEASFAYNPLGKLAYSHTAEGTETTFAHDPAGRLVRAKND--------DVDLVLVRDPL 618 Query: 181 ESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEG 240 I + + G ++ D G P L +G Sbjct: 619 GRVITESCNGRTVTKTYDAAGRVTSRVTPSGASTSWS--------YDADGTPSLLT-ADG 669 Query: 241 ATEWCAEYDEWGNLLNEENPHQL 263 +D G + P + Sbjct: 670 HEL-RFGHDPAGRETRRDLPGGV 691 >UniRef50_A9EW02 Conserved exported carbohydrate-binding protein,Rhs family n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=A9EW02_SORC5 Length = 1310 Score = 174 bits (440), Expect = 8e-42, Method: Composition-based stats. Identities = 74/374 (19%), Positives = 128/374 (34%), Gaps = 24/374 (6%) Query: 3 PDNRIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYA 62 A Y Y H RL E D D Y D + R++ R Sbjct: 881 AGGAPVHVAERRYVYGPHARLLESFDA---------DRGRRVYRRDLRGRILSCARATG- 930 Query: 63 EPLVESRYLYDPLGRRVAKR-VWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTR 121 Y YD G V ++ + + +D R T + + Sbjct: 931 ----TEVYAYDAAGSVVWAGDRDPATPWGLRPGNVLVRTDRARFTYDARRRRTTRTESDG 986 Query: 122 IQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQ--MLDR 179 T Y L V+ +G + + ++++ P + + L Sbjct: 987 SVTEYLWDCRNQLREVKLPSGVRVLFKYDAFGRRVRKTIVTPDADPTKAPHVRRVDFLWD 1046 Query: 180 LESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTE 239 +R + + G + +Q + + + D G+P LVS Sbjct: 1047 YNELAAEIDSERGARSIVTARGTFLPMLQIE-------KGESYAVVPDAMGVPKELVSGR 1099 Query: 240 GATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEESGLYYNRHRYYDPLQGRYITQD 299 G W A++ WG +L EE+P ++ L G DEE+GL Y RHRY+DP R++++D Sbjct: 1100 GQVAWRADHTLWGRVLAEESPAGVRAPFSLLGHYVDEETGLAYVRHRYFDPETARWLSRD 1159 Query: 300 PIGLKGGWNFYQYPLNPVQYIDSMGLASKYGHLNNGGYGARPNKPPTPDPSKLPDIAKQL 359 P+G GG N + + P + +D +GL ++ + R + Sbjct: 1160 PLGFDGGPNLFGFDGMPTEEVDPLGLMTRADFVQFMRQYRRQRIQAQRASDQAQSQIGTS 1219 Query: 360 RLPYPIDQASSAPN 373 + Y +D + Sbjct: 1220 HVVYSVDSRGNRGQ 1233 Score = 74.5 bits (181), Expect = 8e-12, Method: Composition-based stats. Identities = 40/269 (14%), Positives = 70/269 (26%), Gaps = 25/269 (9%) Query: 13 YLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYLY 72 + Y +D G + R T RY YD+ L+ T + Y Sbjct: 440 WEYEFDERGNVVS--------EKRVGSGSTTRYAYDADELLISITTPAG----EVVTFSY 487 Query: 73 DPLGRRVA-----KRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQ 127 D R V R E D P+VT + WD + Y Sbjct: 488 DEEARLVGVDGPGDRKVTFEYDGDRLAREIEGPRVTTFAWDHRGALARVTGPDGVTFAYD 547 Query: 128 PGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLE-----S 182 ++ L RV G + + + + + + + +++ ++ Sbjct: 548 IDAWGRLARVSGPEGAIVSYAYDAEHNLAAMTDARGATTRLEHDAMGRVVAEIDALGRAE 607 Query: 183 EILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHL--YHCDHRGLPLALVSTEG 240 D + RR + L + + + + G +G Sbjct: 608 RTTYDAIGRPVRRAMRDGALIELTYDGGDNVIRSSDGAGLHNGFERCGTGRVARRTLPDG 667 Query: 241 ATEWCAEYDEWGNLLNEENPHQLQQLIRL 269 W YD L N R Sbjct: 668 E-TWEMAYDILERLREIHNAKGEVYEYRY 695 Score = 69.5 bits (168), Expect = 2e-10, Method: Composition-based stats. Identities = 45/302 (14%), Positives = 79/302 (26%), Gaps = 52/302 (17%) Query: 6 RIARDAHYLYRYD--RHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAE 63 R+ + YD GRL + + Y YD++H L T + A Sbjct: 535 RVTGPDGVTFAYDIDAWGRLARVS---------GPEGAIVSYAYDAEHNLAAMTDARGAT 585 Query: 64 PLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVT-------WYGWDGDRLTTIQ 116 +E D +GR VA+ + T + ++ R + +DG Sbjct: 586 TRLEH----DAMGRVVAEIDALGRAERTTYDAIGRPVRRAMRDGALIELTYDGGDNVIRS 641 Query: 117 NDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPV---- 172 +D + ++ + R GE + + + L++ G + Sbjct: 642 SDGAGLHNGFERCGTGRVARRTLPDGETWEMAYD-ILERLREIHNAKGEVYEYRYDRANR 700 Query: 173 LVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHL---YHCDHR 229 LV+ + I + T ++ H Y D Sbjct: 701 LVEEISFDGQSIRYAHSIAHEPIRIDYDDGTWIDLERDARGRVIAEHNAHFRIEYERDAL 760 Query: 230 GLP-LALVSTEG-----ATEW----------------CAEYDEWGNLLNEENPHQLQQLI 267 G A V G W YD G + + P Sbjct: 761 GRILRAAVDEHGGPVVTEIVWNDLDRVEKVVQDGLAITYTYDVMGRVASRTLPDGSVTKY 820 Query: 268 RL 269 Sbjct: 821 FY 822 Score = 58.7 bits (140), Expect = 5e-07, Method: Composition-based stats. Identities = 45/316 (14%), Positives = 84/316 (26%), Gaps = 46/316 (14%) Query: 5 NRIARDAH-----YLYRYDRHGRLTEKTDLIPEGVIRTDD------------ERTHRYHY 47 R+AR + Y YD L TD D R R Y Sbjct: 552 GRLARVSGPEGAIVSYAYDAEHNLAAMTDARGATTRLEHDAMGRVVAEIDALGRAERTTY 611 Query: 48 DSQHRLVHYTRTQYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSR-------KP 100 D+ R V A + YD + + R Sbjct: 612 DAIGRPVRRAMRDGALIEL----TYDGGDNVIRSSDGAGLHNGFERCGTGRVARRTLPDG 667 Query: 101 QVTWYGWDGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSG 160 + +D ++ Y+ L+ + G+ + + ++ Sbjct: 668 ETWEMAYDILERLREIHNAKGEVYEYRYDRANRLVEEISFDGQSIRYAHSIAHEPIRIDY 727 Query: 161 GEDGGSVVFPPVLVQMLDRLESEILADRVSEESRRWL------ASCGLTVEQMQNQMDPV 214 + + +++ + + + R L + E + N +D V Sbjct: 728 DDGTWIDLERDARGRVIAEHNAHFRIEYERDALGRILRAAVDEHGGPVVTEIVWNDLDRV 787 Query: 215 Y--TPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQ 272 Y D G + +G+ YD G L+ ++ + + R Sbjct: 788 EKVVQDGLAITYTYDVMGRVASRTLPDGSVT-KYFYDPAGGLVGLDHGGEKIAVQR---- 842 Query: 273 QYDEESGLYYNRHRYY 288 + +GL R RYY Sbjct: 843 ---DAAGL--ERRRYY 853 Score = 47.5 bits (111), Expect = 0.001, Method: Composition-based stats. Identities = 70/501 (13%), Positives = 117/501 (23%), Gaps = 99/501 (19%) Query: 6 RIARDAHYLY--RYDRHGRLTEKTDLIPEGVIRTDDERTHRY------HYDSQHRLVHYT 57 RIAR Y R+ G LT + + G + Y RL Sbjct: 268 RIARVQD-RYEIRHRPSG-LTRVFEPLSPGERAVLTRIHDDFGNAVALSY-EGGRLARIA 324 Query: 58 RTQYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQN 117 T E + +DP GR V R Q Y + DR Sbjct: 325 DTAG----REITFAHDPEGRIARAEVHAR----------GALQQAVAYAYHVDRELAAVT 370 Query: 118 DRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDG------------- 164 + Y + L+ +G + + +S G D Sbjct: 371 NALGETDTYSYDAQHRLVAKALRSGVVFRYTYDPDIQRCVRSTGPDRLQNVELHYETPAK 430 Query: 165 -----------------------GSVVFPPVLVQMLDRLESEILADRVSEESRRWLASCG 201 V D E I + E + Sbjct: 431 VSVAGNPDPWEYEFDERGNVVSEKRVGSGSTTRYAYDADELLISITTPAGEVVTFSYDEE 490 Query: 202 LTVEQMQNQMD------------PVYTPARKIHLYHCDHRGLPLALVSTEGATEWCAEYD 249 + + D ++ + DHRG + +G + + D Sbjct: 491 ARLVGVDGPGDRKVTFEYDGDRLAREIEGPRVTTFAWDHRGALARVTGPDG-VTFAYDID 549 Query: 250 EWGNLLNEENPHQLQQLIRLPGQQYDEESGLYYNR-HRYYDPLQGRYITQDPIGLKGGWN 308 WG L P D E L R R + D +G Sbjct: 550 AWGRLARVSGPEGAIVSYAY-----DAEHNLAAMTDAR---GATTR-LEHDAMGRV---- 596 Query: 309 FYQYPLNPVQYIDSMGLASKYGHLNNGGYGARPNKPPTPD--PSKLPDIAKQLRLPYPID 366 V ID++G A + + G R + D + + Sbjct: 597 --------VAEIDALGRAERTTYDAIGRPVRRAMRDGALIELTYDGGDNVIRSSDGAGLH 648 Query: 367 QASSAPNVFKTFFRALSPYDYTLYCRKWVKPNLTCTPQDDSQYPGMDTKTASDYLPQTNW 426 + R L P T + L + A+ + + ++ Sbjct: 649 NGFERCGTGRVARRTL-PDGETWEMAYDILERLREIHNAKGEVYEYRYDRANRLVEEISF 707 Query: 427 PTTQLPPGYTCAEPYLFPDIN 447 + ++ A + D + Sbjct: 708 DGQSIRYAHSIAHEPIRIDYD 728 >UniRef50_C9P064 Rhs family protein n=1 Tax=Vibrio coralliilyticus ATCC BAA-450 RepID=C9P064_9VIBR Length = 2408 Score = 174 bits (440), Expect = 8e-42, Method: Composition-based stats. Identities = 62/419 (14%), Positives = 117/419 (27%), Gaps = 47/419 (11%) Query: 13 YLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRT---------QYAE 63 YRYD H +T + D T + YD R+ + + Sbjct: 1816 IQYRYDNHNNVTYRYDEQL--------GITDTWTYDGLDRVTSNAISLANKTQHGVNNPD 1867 Query: 64 PLVESRYLYDPLGRRVAKRV---WRRERDLTGWMSLSRKPQV-TWYGWDGDRLTTIQNDR 119 Y YD LG + K + G ++++ + Y +G+ L + Sbjct: 1868 LAGPFNYRYDKLGNLIHKSDIGDYHYSGQQAGPHAVTKANGLNYQYDNNGNMLRAWADGN 1927 Query: 120 TRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDR 179 + + + F ++ G+ + + + + + + F ++ D Sbjct: 1928 SANERELEWTEFNKPNKITR-NGKTVEFFYDANHNRYLKKNSDGIETFYFGKSYERVKD- 1985 Query: 180 LESEILADRVSEESRRWLASCGLTVEQ-MQNQMDPVYTPARKIHLYHCDHRGLPLALVST 238 + + + ++ + G + Q + +++ H D + Sbjct: 1986 ------TNTGIVQHKHFVYADGKLIALNTQTKGAEDDLQDKQVRYLHYDALNSVDMITDG 2039 Query: 239 EGATEWCAEYDEWGNLLNEENPH--------QLQQLIRLPGQQYDEESGLYYNRHRYYDP 290 G YD WG G + E GL + R YD Sbjct: 2040 YGLVVERRSYDTWGKQRKVAWSDKGPLDVVQSAITNRGYTGHEEITEVGLVHMNGRVYDQ 2099 Query: 291 LQGRYITQDPI----GLKGGWNFYQYP-LNPVQYIDSMGLASKYGHLNNGGYGARPNKPP 345 GR+++ DP +N Y Y NP++Y D G + N G N Sbjct: 2100 ELGRFLSADPYIQEPYRTNSFNRYSYVMNNPLKYTDPKGYW--FQDENGNGLTGTCNTDS 2157 Query: 346 TPDPSKLPDIAKQLRLPYPIDQASSAPNVFKTFFRALSPYDYTLYCRKWVKPNLTCTPQ 404 T ++ + Y + W P T Q Sbjct: 2158 TTTNGITGSEGDWGTD--DNGNFYVREDIAEDGIGYTMEYAKRWWEGLWGGPGNTKYDQ 2214 Score = 55.2 bits (131), Expect = 6e-06, Method: Composition-based stats. Identities = 43/289 (14%), Positives = 82/289 (28%), Gaps = 55/289 (19%) Query: 16 RYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHR-LVHYT-RTQYAEPLVESRYL-Y 72 R+DR+GR T P+ + + + YD +R L + +RY Y Sbjct: 1197 RWDRNGRKVSVT--RPQFLSKKSPAPIVTFSYDELNRELTKSEPASNGGVASFTTRYQGY 1254 Query: 73 -----DP-----------LGRRVAKRVWRRERDLTGWM-------SLSRKPQVTWYGWDG 109 D +G + K + S T +D Sbjct: 1255 LTSVTDARGFEHSTLTNIMGHILRKNEPDSAYQTYQYYPDGKLRSSTDSAGNTTQIRYDN 1314 Query: 110 DRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVF 169 +D Q Y + L+ A G + + SL ++Q+ G + + + Sbjct: 1315 LGHRNSLDDSDMGQWSYNYNAAGELVYKRDAKGTVTTIEYDSLGRKVKQTEGSNVSTWRY 1374 Query: 170 PPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYH---- 225 L + E+ + + GLT E D ++ H ++ Sbjct: 1375 D-----ERGALGTLSGFAGNGSETDYYYNTAGLTEEVAVQVGDEKFS----THYFYDKFE 1425 Query: 226 -------CDHRGLPLA-------LVSTEGATEWCAEYDEWGNLLNEENP 260 + LA ++ Y+ +G + +P Sbjct: 1426 RVAREVRPNGIDTTLAGAAKLLSSTNSNDRLAVEYVYNPYGYVAGVRSP 1474 Score = 46.0 bits (107), Expect = 0.003, Method: Composition-based stats. Identities = 38/279 (13%), Positives = 67/279 (24%), Gaps = 33/279 (11%) Query: 12 HYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYL 71 Y YD G + ++ + RT T ++ D+Q L T +++ Sbjct: 1046 TTQYSYDDWGNVVSQSVEGADLAKRT---TTTQF--DAQG-LFSTASTNAVGHRTSTQF- 1098 Query: 72 YDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQPGSF 131 D GR K+ + T + +V G + Q Sbjct: 1099 -DAQGRL--KQSVSPLKGRTTGYTYDVFSRVMTETLPGTGNINHTSYGLGSQCKDGTSQT 1155 Query: 132 TPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLES----EILAD 187 + ATG T +++ G +V R S + L+ Sbjct: 1156 VSCVTTSPATGGKVVTHFDYAGREIRKLHTGFSGQLVVVDTRWDRNGRKVSVTRPQFLSK 1215 Query: 188 RVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHL-----YHCDHRG---LPLALVSTE 239 + + + D RG L + Sbjct: 1216 KSPAPIVTFSYDELNRELTKSEPASNGGVASFTTRYQGYLTSVTDARGFEHST--LTNIM 1273 Query: 240 GATE---------WCAEYDEWGNLLNEENPHQLQQLIRL 269 G +Y G L + + IR Sbjct: 1274 GHILRKNEPDSAYQTYQYYPDGKLRSSTDSAGNTTQIRY 1312 Score = 41.3 bits (95), Expect = 0.085, Method: Composition-based stats. Identities = 32/188 (17%), Positives = 49/188 (26%), Gaps = 29/188 (15%) Query: 11 AHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRY 70 + Y Y+ G L K D YDS R +T+ + S + Sbjct: 1327 GQWSYNYNAAGELVYKRDAK---------GTVTTIEYDSLGR--KVKQTEGSN---VSTW 1372 Query: 71 LYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLT---TIQNDRTRIQTIYQ 127 YD G L + T Y ++ LT +Q + T Y Sbjct: 1373 RYDERG------------ALGTLSGFAGNGSETDYYYNTAGLTEEVAVQVGDEKFSTHYF 1420 Query: 128 PGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILAD 187 F + R G + + S V+ P R + Sbjct: 1421 YDKFERVAREVRPNGIDTTLAGAAKLLSSTNSNDRLAVEYVYNPYGYVAGVRSPRNYADE 1480 Query: 188 RVSEESRR 195 + S R Sbjct: 1481 VFTSASFR 1488 >UniRef50_B0MES5 Putative uncharacterized protein n=3 Tax=Clostridiales RepID=B0MES5_9FIRM Length = 2397 Score = 174 bits (440), Expect = 8e-42, Method: Composition-based stats. Identities = 68/367 (18%), Positives = 124/367 (33%), Gaps = 36/367 (9%) Query: 8 ARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDD-ERTHRYHYDSQHRL--VHYTRTQYAEP 64 Y Y YD++ + EKT + + T Y YDS RL T + + Sbjct: 1877 TVVESYAYSYDKNSNIIEKTQINNYPQKDEEKVNETKHYTYDSLGRLEKTVTTDHRKDDS 1936 Query: 65 LVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTW----------YGWDGDRLTT 114 Y YD +G R+A+ + TW Y +D + Sbjct: 1937 KQTVTYTYDKVGNRLAEEKGDTKTTYDYNGLDQVTTSTTWKDGTAQENKQYAYDKNGNEI 1996 Query: 115 IQNDRTRIQTIY-QPGSFTPLIRV----ETATGELAKTQRRSLADTLQQSGGEDGGSVVF 169 Q + + +Y + L V + + + + +Q+ G+ + + Sbjct: 1997 GQTNSKTGEILYRTYDAENRLTEVSVNKDGKNAIVQQNRYNGDGQRIQRVEGDQTTNYYY 2056 Query: 170 PPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHR 229 D + S + + S+ L + G + + + ++Y+ D + Sbjct: 2057 -------QDGVVSYTTNGKGDQTSQDLLGTDGNIIGTQRYTGN-----DAAYYVYNKDVQ 2104 Query: 230 GLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEESGLYYNRHRYYD 289 G L+ +G + Y+++G + + G +YDE +G YY RYY+ Sbjct: 2105 GSTTNLLKDDGKADVSYRYEDFGETTSV-GENTSGNETCYTGGRYDETTGFYYLNARYYN 2163 Query: 290 PLQGRYITQDPI----GLKGGWNFYQYP-LNPVQYIDSMGLASKYGHLNNGGYGARPNKP 344 P GR++++D + Y Y NPV Y+D G + Y A Sbjct: 2164 PEDGRFLSEDTYRGETNEPDTQHLYAYCADNPVNYVDPSGHKFLGYWSSKQHYYAFNQNA 2223 Query: 345 PTPDPSK 351 P Sbjct: 2224 PQKYAGY 2230 Score = 58.7 bits (140), Expect = 5e-07, Method: Composition-based stats. Identities = 37/297 (12%), Positives = 74/297 (24%), Gaps = 55/297 (18%) Query: 5 NRIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVH-------YT 57 + + YD +G T++T ++ YHYD ++RL Sbjct: 1649 GNLGESISTKFTYDTNGNKTKET---------YENGAYKTYHYDKKNRLTETNTYESPEA 1699 Query: 58 RTQYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTI-- 115 ++ +++ Y YD + + ++ + T +DG + T Sbjct: 1700 GSESGTRTLKTSYSYDGNDQLIEMVDYQVSGNTETAYRY------TECEYDGLQRKTTYA 1753 Query: 116 --------QNDRTRIQTI-YQPGSFTPLIRVETAT--GELAKTQRRSLADT--------- 155 D R I Y + L +V T + +D Sbjct: 1754 ELSQSEKPTADEIRSHAIKYAYDAEGKLTKVIYPTKKDGVRSLSYHYTSDGWLSVIKADV 1813 Query: 156 --LQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDP 213 + + + + +L+D + + V +M Sbjct: 1814 YKGSDAKEATVRTYAYDDYGKVTEIKDYRNLLSDGDKAVKKVYTYDTFDRVSKMVYTDLE 1873 Query: 214 VYTPARKIHLYHCDHRGLPLALV--------STEG-ATEWCAEYDEWGNLLNEENPH 261 + + Y D + E YD G L Sbjct: 1874 HPDTVVESYAYSYDKNSNIIEKTQINNYPQKDEEKVNETKHYTYDSLGRLEKTVTTD 1930 Score = 53.7 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 32/279 (11%), Positives = 67/279 (24%), Gaps = 49/279 (17%) Query: 16 RYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQ---------YAEPLV 66 YD G T KTD + T Y YD Q+R+ ++ + + Sbjct: 1570 SYDDKGNETAKTD---------GNGNTVAYTYDDQNRVTKVSQGDNSTSISYTMGTDGVN 1620 Query: 67 ESRYLYDPLG-RRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTI 125 + D +G + + T + T + +D + T + Sbjct: 1621 TTSIT-DAMGHENIEVTNAAGLTETTTSKGNLGESISTKFTYDTNGNKTKETYENGAYKT 1679 Query: 126 YQPGSFTPLIRVETATGEL-----------AKTQRRSLADTLQQSGGEDGGSVVFPPVLV 174 Y L T ++ + G+ Sbjct: 1680 YHYDKKNRLTETNTYESPEAGSESGTRTLKTSYSYDGNDQLIEMVDYQVSGNTETAYRYT 1739 Query: 175 QMLDRLESE------------ILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIH 222 + AD + + ++ + ++ + + Sbjct: 1740 ECEYDGLQRKTTYAELSQSEKPTADEIRSHAIKYAYDAEGKLTKVIYPTKKDGVRSLS-Y 1798 Query: 223 LYHCDHRGLPLAL-----VSTEGATEWCAEYDEWGNLLN 256 Y D + + AT YD++G + Sbjct: 1799 HYTSDGWLSVIKADVYKGSDAKEATVRTYAYDDYGKVTE 1837 Score = 51.3 bits (121), Expect = 8e-05, Method: Composition-based stats. Identities = 41/327 (12%), Positives = 82/327 (25%), Gaps = 68/327 (20%) Query: 8 ARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHR----------------------- 44 R Y YD + +L E D G T T Sbjct: 1705 TRTLKTSYSYDGNDQLIEMVDYQVSGNTETAYRYTECEYDGLQRKTTYAELSQSEKPTAD 1764 Query: 45 --------YHYDSQHRLVHYTRTQYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSL 96 Y YD++ +L + + Y Y G + G + Sbjct: 1765 EIRSHAIKYAYDAEGKLTKVIYPTKKDGVRSLSYHYTSDG----WLSVIKADVYKGSDAK 1820 Query: 97 SRKPQVTWYGWDG------DRLTTIQNDRTRIQTIYQPGSFTPLIR-----VETATGELA 145 + Y G D + + ++ +Y +F + + +E + Sbjct: 1821 EATVRTYAYDDYGKVTEIKDYRNLLSDGDKAVKKVYTYDTFDRVSKMVYTDLEHPDTVVE 1880 Query: 146 KTQRRSL-----------ADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSEESR 194 + Q+ + + + + L++ + S+++ Sbjct: 1881 SYAYSYDKNSNIIEKTQINNYPQKDEEKVNETKHYTYDSLGRLEKTVTTDHRKDDSKQTV 1940 Query: 195 RWLAS-CGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGN 253 + G + + + Y D YD+ GN Sbjct: 1941 TYTYDKVGNRLAEEKGDTKTTYDYNG------LDQVTTSTTWKDGTAQENKQYAYDKNGN 1994 Query: 254 LLNEENPHQLQQLIRLPGQQYDEESGL 280 + + N + L R YD E+ L Sbjct: 1995 EIGQTNSKTGEILYR----TYDAENRL 2017 Score = 48.7 bits (114), Expect = 6e-04, Method: Composition-based stats. Identities = 41/315 (13%), Positives = 76/315 (24%), Gaps = 53/315 (16%) Query: 8 ARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDE------RTHRY-----------HYDSQ 50 + Y YD+ G ++TD I E D + Y HYD + Sbjct: 1278 KTVSDVSYSYDKSGNTIKETDSIAETKTVCDYDEDGDLILEEDYEEGELTSREETHYDEK 1337 Query: 51 HRLVHYTRTQYAEPLVESRYL-YDPLGRRVAKRVWRRERDLTGWM-----------SLSR 98 ++ T + E DP+GR + T L+ Sbjct: 1338 DHIITEDSTVTQGNVKEESTTVLDPMGRETKSQDVNTTEITTTEYDFLGRQVKIQKELNG 1397 Query: 99 KPQVTWYGWDGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGE----LAKTQRRSLAD 154 + ++ + ++ T + T Y + + + KT Sbjct: 1398 VVKTEEKEYNANGTLKLETSDTGVTTSYTYDENNRVEEAVEVSKDGITKTTKTDYGYADR 1457 Query: 155 TLQQSGGED--------GGSVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQ 206 + G +V D + + + G Sbjct: 1458 EIHTLSGMKSYQNLSVVTTTVNGKVQGETYTDGSGNTVREKSNGIYTDHVFTEDGKETAS 1517 Query: 207 MQNQMDPVYTPARKIHLYHCDHRG-------LPLAL-----VSTEGATEWCAEYDEWGNL 254 + KI L D G P+ + E + YD+ GN Sbjct: 1518 ILLGTKDGADVKGKITLNLYDKNGKQTHTVQNPVIAGEDVSIDPEKSIVNQTSYDDKGNE 1577 Query: 255 LNEENPHQLQQLIRL 269 + + + Sbjct: 1578 TAKTDGNGNTVAYTY 1592 >UniRef50_C7PJF4 YD repeat protein n=2 Tax=Chitinophaga pinensis DSM 2588 RepID=C7PJF4_CHIPD Length = 1401 Score = 173 bits (439), Expect = 9e-42, Method: Composition-based stats. Identities = 79/420 (18%), Positives = 129/420 (30%), Gaps = 56/420 (13%) Query: 11 AHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRY 70 Y +D +L + + I GV++ Y +D L +Y Sbjct: 939 RRRHYSWDAAQQLKQIVNGITHGVVK--------YSHDDTGNLTWAQYEDG-------QY 983 Query: 71 LY---DPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQ 127 Y D G + + G Y +G + I Y+ Sbjct: 984 DYRLPDKTGNIYRTQARNDRKYGPGGKLAESTEARFIYDEEGFLVKKIDLKAADAVWQYE 1043 Query: 128 PGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILAD 187 L +V ++ + + +L +++ V+ + + Sbjct: 1044 WYGNGMLKKVTRPDNKVVEFRYDALGRRIEKQYKGQITRFVWDGNITLHQWHYPASERPA 1103 Query: 188 ----------------RVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGL 231 +E W+ G + + D + D+ G Sbjct: 1104 IEIDELGDIRQHHPEPVPAENLITWVFEEGTLIPVAKLTQDAR-------YAILSDYLGT 1156 Query: 232 PLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEESGLYYNRHRYYDPL 291 P G W E D +G L R GQ D E+GLYYNR RYY PL Sbjct: 1157 PAEAYDASGEKVWEGELDIYGKLRKLAGASDFI-PFRRQGQYEDVETGLYYNRFRYYSPL 1215 Query: 292 QGRYITQDPIGLKGGWNFYQYPLNPVQYIDSMGLASKYGHLNNGG-----------YGAR 340 +G YI+QDPI L+GG FY+Y P +D GL Y ++ G R Sbjct: 1216 EGLYISQDPIRLEGGSRFYEYSRCPTLILDPFGLVDFYHATSSPGATKGVLGGVDPSTGR 1275 Query: 341 PN---KPPTPDPSKLPDIAKQLRLPYPIDQASSAPNVFKTFFRALSPYDYTLYCRKWVKP 397 PN P + + +Q R + ++ ++ LS + +W Sbjct: 1276 PNLDFNPSGQGGFYVTNDLEQARSWVKNGGSVIHYDIPESELAKLSIKTFDSASDEWADY 1335 Score = 67.1 bits (162), Expect = 1e-09, Method: Composition-based stats. Identities = 48/287 (16%), Positives = 84/287 (29%), Gaps = 36/287 (12%) Query: 3 PDNRIARDAHYLYRYDRHGRLTEKTDLIPEGV-----------IRTDDERTHRYHYDSQH 51 +R + Y Y+ G +T D + + + ++ + YD + Sbjct: 397 AHHRGQQKQLVRYEYNTAGDMTAIIDALEQTTRMQYHQHLMMKKTDRNGQSFYWEYDGKG 456 Query: 52 RLVHYTRTQYAEPLVESRYLYDPL-G-RRVAKRVWRRERDLTGWM-------SLSRKPQV 102 R VH + L+E R Y+P G V + + Q Sbjct: 457 RCVHTWGDEG---LLEGRIEYNPQEGYNLVTNALGQTTTYYYTPDFLVTQIKDPLGNSQF 513 Query: 103 TWYGWDGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGE 162 T Y D + + D T Y ++ G L G + Sbjct: 514 TAYTEDAE--IYREIDEEANVTGYAYDEKGNRTQIIHPDGSTIFFNYDDEDRLLLSVGAQ 571 Query: 163 DGGSVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIH 222 G + L S AD + + + +++++ + Sbjct: 572 GGSRSYVYYEEGPLKGLLHSFTEADG---RMSIFSYNEKKLLVKVEDRQR-----NSTLL 623 Query: 223 LYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRL 269 Y DH L L + G + W YD WG ++ N Q +Q R Sbjct: 624 EYDEDHNISALILQNG-GHSSWQ--YDAWGQCIHTVNSLQQEQHFRY 667 Score = 56.4 bits (134), Expect = 2e-06, Method: Composition-based stats. Identities = 35/277 (12%), Positives = 74/277 (26%), Gaps = 35/277 (12%) Query: 15 YRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVE------- 67 Y YD G T+ + ++YD + RL+ Q Sbjct: 535 YAYDEKGNRTQIIHPDGSTIF---------FNYDDEDRLLLSVGAQGGSRSYVYYEEGPL 585 Query: 68 ----SRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQ 123 + + GR ++ R+ T +D D + + Sbjct: 586 KGLLHSFT-EADGR---MSIFSYNEKKLLVKVEDRQRNSTLLEYDEDHNISALILQNGGH 641 Query: 124 TIYQPGSFTPLIRVETATGELAKTQRRSLADT--LQQSGGEDGGSVVFPPVLVQMLDRLE 181 + +Q ++ I + + + L + + G V Sbjct: 642 SSWQYDAWGQCIHTVNSLQQEQHFRYDLLGRATEILYADGNQLQLRYNAYNEVVEAKDRN 701 Query: 182 SEILADRVSEESRRWLASCGLTVEQMQNQMDPVYT---PARKIHLYHCDHRGLPLALVST 238 + S R G + + N + + + +++ + RG + Sbjct: 702 RHLRFAYTPLGSVRMREENGAKLHFLYNNAEQLTSLINEKGEMYRLGRNGRGDIIHETGF 761 Query: 239 EGATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQYD 275 +G + D G ++ E P R +YD Sbjct: 762 DG-IQRHYHRDAAGKVVRTERPGH-----RWTEYEYD 792 Score = 51.3 bits (121), Expect = 8e-05, Method: Composition-based stats. Identities = 26/256 (10%), Positives = 63/256 (24%), Gaps = 36/256 (14%) Query: 7 IARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYA---- 62 + H ++YD G+ + + + + YD R Sbjct: 636 LQNGGHSSWQYDAWGQCIHTVNSLQ---------QEQHFRYDLLGRATEILYADGNQLQL 686 Query: 63 ------------EPLVESRYLYDPLGRRVAKRVWRRERDLTGWMS------LSRKPQVTW 104 + R+ Y PLG + + + ++ K ++ Sbjct: 687 RYNAYNEVVEAKDRNRHLRFAYTPLGSVRMREENGAKLHFLYNNAEQLTSLINEKGEMYR 746 Query: 105 YGWDGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDG 164 G +G + IQ Y + ++R E + + + + Sbjct: 747 LGRNGRGDIIHETGFDGIQRHYHRDAAGKVVRTERPGHRWTEYEYDFNGRVTRAEHSDGS 806 Query: 165 GSVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGL-----TVEQMQNQMDPVYTPAR 219 Q+++ + + R + + N+ V + Sbjct: 807 WETYSYDRNGQLIEAMNEHSTVRLQRDAMGRIVQEYQNEFTVSSTYDKHNRRQQVQSSLG 866 Query: 220 KIHLYHCDHRGLPLAL 235 L + G + Sbjct: 867 ADLLIQRNALGEVTGM 882 >UniRef50_B4SL73 YD repeat protein n=4 Tax=Stenotrophomonas maltophilia RepID=B4SL73_STRM5 Length = 1577 Score = 173 bits (439), Expect = 1e-41, Method: Composition-based stats. Identities = 71/330 (21%), Positives = 113/330 (34%), Gaps = 30/330 (9%) Query: 8 ARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVE 67 A Y YD G +TE + V+ Y YD+ RL A Sbjct: 1134 ADGLSLGYGYDPVGSITELKNGTGSTVLAK-------YAYDALGRLTQ--TQDGATGTPI 1184 Query: 68 SRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQ 127 Y YD G R A T + R V + D + + + + Sbjct: 1185 ETYAYDATGNRTALTTSAGTASYTYPATSHRLTAVDGEARNHDAVGNTTSIGGKT---FI 1241 Query: 128 PGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILAD 187 + V+ L + + ++ + Q A Sbjct: 1242 YNDANRMNAVKQGNAVLESYAYNHRGERVLRTPAGGAAQITLYNEAGQ----WLGNYSAT 1297 Query: 188 RVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATE---W 244 +++ WL + + + + + P ++ DH G P ++ W Sbjct: 1298 GQAQQQAIWLDNYPVALISVPSAGVP------ELAYIQPDHLGTPRVVIDPARDVAIWEW 1351 Query: 245 CAEYDEWGNLLNEENPH----QLQQLIRLPGQQYDEESGLYYNRHRYYDPLQGRYITQDP 300 + + +GN + +P + +R PGQQ + SGL+YN R YDP GRY DP Sbjct: 1352 SNKSEVFGNQIPSTDPDGDGVAFELALRFPGQQATDASGLFYNYRREYDPAVGRYTQSDP 1411 Query: 301 IGLKGGWNFYQYP-LNPVQYIDSMGLASKY 329 IGL GG N + Y +P +D +GLA K Sbjct: 1412 IGLMGGLNSFAYGSGDPTGRVDPLGLADKK 1441 Score = 64.1 bits (154), Expect = 1e-08, Method: Composition-based stats. Identities = 39/300 (13%), Positives = 72/300 (24%), Gaps = 40/300 (13%) Query: 2 WPDNRIA-----RDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRY----------- 45 WP ++ + Y YD RLT+ D + T D +R Sbjct: 777 WPTGQVQKITEPDGSSVSYVYDAALRLTDIEDNAGNTIHYTLDNAGNRLKEDTLDTGGTL 836 Query: 46 ------HYDSQHRLVHYTRTQYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRK 99 +++ +L + + YD G + + L+R Sbjct: 837 RRTLARTFNTLGQLTALKD----AGNHATGFAYDANGNLQTVTDALQRVTSQQYDPLNRL 892 Query: 100 PQV----------TWYGWDGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQR 149 Q ++ T D + T Y F L + + Sbjct: 893 AQTLQDVGGVAAEIRSQYNALDQVTQVTDPKGLHTTYAYNGFGDLTGQVSPDSGASSYTV 952 Query: 150 RSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQN 209 + + + + L +++ + D A+C + Sbjct: 953 DAAGNRKAATDARGVTATYHYDALNRLIGVAYPDPNLDVGYSYDVAP-AACAADERFAKG 1011 Query: 210 QMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEW--CAEYDEWGNLLNEENPHQLQQLI 267 ++ V H D G V T Y + G L P Sbjct: 1012 RLGQVLHANGSTQYCH-DRFGQVTRKVQTVNGVASTLRYAYSKSGRLTALTYPDGSVADY 1070 Score = 56.7 bits (135), Expect = 2e-06, Method: Composition-based stats. Identities = 38/286 (13%), Positives = 60/286 (20%), Gaps = 69/286 (24%) Query: 16 RYDRHGRLTEKTDLIPEGVIRT-------------------------------------- 37 YD GR D T Sbjct: 728 AYDAFGRPLSVKDANGVVTDYTYHARGWPTSITVRGATTAEDRVTQLSYWPTGQVQKITE 787 Query: 38 DDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLS 97 D + Y YD+ RL Y D G R+ + L ++ + Sbjct: 788 PDGSSVSYVYDAALRLTDIEDNAGN----TIHYTLDNAGNRLKEDTLDTGGTLRRTLART 843 Query: 98 ------------RKPQVTWYGWDGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELA 145 T + +D + D + T Q L + G +A Sbjct: 844 FNTLGQLTALKDAGNHATGFAYDANGNLQTVTDALQRVTSQQYDPLNRLAQTLQDVGGVA 903 Query: 146 KTQR--RSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLT 203 R + D + Q G + L S S A+ Sbjct: 904 AEIRSQYNALDQVTQVTDPKGLHTTYAYNGFGDLTGQVSP----DSGASSYTVDAAGNRK 959 Query: 204 VEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWCAEYD 249 + YH D + + + + YD Sbjct: 960 AATDARGVTAT---------YHYDALNRLIGVAYPDPNLDVGYSYD 996 Score = 49.4 bits (116), Expect = 3e-04, Method: Composition-based stats. Identities = 48/319 (15%), Positives = 85/319 (26%), Gaps = 64/319 (20%) Query: 14 LYRYDRHGRLTEKTDLIP----------------EGVIRTDDERTHRYHYDSQHRLVHYT 57 Y Y ++ T G+ D R + YDS R++ Sbjct: 433 TYTYTPQNQVATVTYAGGGVRTYHYENQAFPQHLTGITAEDGRRYSTFTYDSDGRVISSQ 492 Query: 58 RTQYAEPLVESRYL-------YDPLGRRVAKRVWRRERDL-----TGWMSLSRKPQVTWY 105 A+ V Y D LGR+ + TG T+Y Sbjct: 493 HAGGADG-VTLAYSPNGGAVVTDALGRQTDYTLTPGGDTAPSRKVTGLTDSQGTVSRTYY 551 Query: 106 GW--DGDRLTTIQNDRTRIQTIYQPGSFTPLIR------------VETATGELAKTQRRS 151 D R DR IQT + T + V + T R Sbjct: 552 DQSVDFRRRLDTYTDRRGIQTKHTYAQGTDPVSGRAVSIHTVTEAVGLPEQRVVTTARDV 611 Query: 152 LADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSEESRRW------LASCGLTVE 205 + + + + + Q ++I + + S + A+ VE Sbjct: 612 ETNAVLTTRIGNRETRTSFNTRRQPTTNTVTDIASGQTRITSYTYCEAADVAAAGSCPVE 671 Query: 206 QMQNQMDPVYTPA----RKIHLYHCDH-----------RGLPLALVSTEGATEWCAEYDE 250 + +D T + D +G ++ + G T YD Sbjct: 672 GLLKSVDGPRTDVVDAVTYAYYPADDAGCAANGACSYRKGDLRSVTNALGQTVETLAYDA 731 Query: 251 WGNLLNEENPHQLQQLIRL 269 +G L+ ++ + + Sbjct: 732 FGRPLSVKDANGVVTDYTY 750 Score = 48.3 bits (113), Expect = 6e-04, Method: Composition-based stats. Identities = 38/274 (13%), Positives = 57/274 (20%), Gaps = 47/274 (17%) Query: 3 PDNR----IARDAHYLYRYDRHGRLTEKTDLIPEGVIRTD-------------------- 38 NR AR Y YD RL P + Sbjct: 955 AGNRKAATDARGVTATYHYDALNRLIGVAYPDPNLDVGYSYDVAPAACAADERFAKGRLG 1014 Query: 39 ----DERTHRYHYDSQHRLVHYTRTQYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWM 94 + +Y +D ++ RY Y GR A Sbjct: 1015 QVLHANGSTQYCHDRFGQVTR-KVQTVNGVASTLRYAYSKSGRLTALTYPDGSVADYVRD 1073 Query: 95 SLSRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLAD 154 R Q+ LT R + +F P G + Sbjct: 1074 IQGRISQI--------GLTRPGQARQIVVNNVSYAAFGPATGWTYGNGRQLQRPLDLDYR 1125 Query: 155 TLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPV 214 D + +E+ S ++ + Q Q+ Sbjct: 1126 ---PQAVHDPAADGLSLGYGYDPVGSITELKNGTGSTVLAKYAYDALGRLTQTQDGATGT 1182 Query: 215 YTPARKIHLYHCDHRGLPLALVSTEGATEWCAEY 248 Y D G AL ++ G Y Sbjct: 1183 PIET-----YAYDATGNRTALTTSAG--TASYTY 1209 Score = 48.3 bits (113), Expect = 7e-04, Method: Composition-based stats. Identities = 36/245 (14%), Positives = 63/245 (25%), Gaps = 34/245 (13%) Query: 4 DNRIARDAHYL-YRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQY- 61 +R+ ++ ++ Y G ++ R D + Y YD RL T + Sbjct: 350 GDRLVQNGNWTLYS---AGSISTFGADGRLITKRFPDATSLTYIYDDSDRLAAVTHSSGR 406 Query: 62 -------------------AEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQV 102 E + + Y Y P +VA + T PQ Sbjct: 407 TLEFVHQSNDYEALISSVLVEGIALATYTYTPQ-NQVATVTYAGGGVRTYHYENQAFPQ- 464 Query: 103 TWYGWDGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGE 162 LT I + R + + S +I + A G T S + Sbjct: 465 --------HLTGITAEDGRRYSTFTYDSDGRVISSQHAGGADGVTLAYSPNGGAVVTDAL 516 Query: 163 DGGSVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIH 222 + + L D SR + ++ D + + Sbjct: 517 GRQTDYTLTPGGDTAPSRKVTGLTDSQGTVSRTYYDQSVDFRRRLDTYTDRRGIQTKHTY 576 Query: 223 LYHCD 227 D Sbjct: 577 AQGTD 581 >UniRef50_C5AIF2 Rhs family protein n=1 Tax=Burkholderia glumae BGR1 RepID=C5AIF2_BURGB Length = 345 Score = 173 bits (439), Expect = 1e-41, Method: Composition-based stats. Identities = 74/272 (27%), Positives = 98/272 (36%), Gaps = 68/272 (25%) Query: 72 YDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQPGSF 131 YD GRR+AK V T YGWDGD L D +Y+ +F Sbjct: 19 YDAFGRRIAKEVNGA---------------RTVYGWDGDTLAYESADEHSTHYLYELETF 63 Query: 132 TPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSE 191 P+ + A +T + D Sbjct: 64 VPMAQYAGAPVNGIETPAAASTDRYTPEDDP----------------------------- 94 Query: 192 ESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEW 251 Q P A + YHCD G PL + G W A Y W Sbjct: 95 -----------------LQRVPAAAAAAHLVFYHCDQIGTPLMMTDEAGELVWEASYRAW 137 Query: 252 GNLLN-------EENPHQLQQLIRLPGQQYDEESGLYYNRHRYYDPLQGRYITQDPIGLK 304 G ++ +R GQQ+D+E+G +YNR+RYYDP R++ +DPIGL Sbjct: 138 GEAQEVIERASAAAGIDVVRNPLRFQGQQFDDETGQHYNRYRYYDPGSSRFVNKDPIGLT 197 Query: 305 GGWNFYQYPLNPVQYIDSMGLASKYGHLNNGG 336 GG N YQY NP+ +ID +GL GG Sbjct: 198 GGINIYQYAPNPISWIDPLGLQRTLTGTTKGG 229 >UniRef50_C1ZMA7 Rhs family protein n=1 Tax=Planctomyces limnophilus DSM 3776 RepID=C1ZMA7_PLALI Length = 1257 Score = 173 bits (438), Expect = 1e-41, Method: Composition-based stats. Identities = 80/465 (17%), Positives = 134/465 (28%), Gaps = 53/465 (11%) Query: 13 YLYRYDRHGRLTEKTDLIPEGVIR-------------TDDERTHRYHYDSQHRLVHYTRT 59 Y YD GR T + D + YD +L T Sbjct: 425 TTYVYDPAGRTTAIGAGTFGSLFAYRYDAAGRKQTCIEDSGIRTTWSYDPAGQLT--TER 482 Query: 60 QYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRK--PQVTWYGWDGDRLTTIQN 117 + Y YDP G + K V + + + +++ V Y +D Sbjct: 483 ANISGFSRTSYTYDPAGNLLVKTVDDDDSFSYTYNAANQQLSNGVYSYTYDLAGNRRSMI 542 Query: 118 DRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQML 177 D T + + I E+ G + + ++ E +V+ + Sbjct: 543 DSNDNITTFTYDALNHNIAFESPLGAVVTYTWAP----VNKANDERQIERNDGAEIVRYI 598 Query: 178 DRLESEILA-DRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALV 236 +S + D G + + + D V + Y D G +L Sbjct: 599 WDDQSILKEVDEFGIVVAENTVQPGGYGKLISRREDDVTSR------YLFDDLGSTRSLF 652 Query: 237 STEGATEWCAEYDEWGNLLNEENPHQLQQLIRL---PGQQYDEESGLYYNRHRYYDPLQG 293 G Y+ +G ++ + G + DEE+GL R R YDP Sbjct: 653 DNSG-PADEYRYEAFGRQISSTGST--ENPYTWVGEQGYRQDEETGLANLRARDYDPQAA 709 Query: 294 RYITQDPIGLKGGW-NFYQYPLN-PVQYIDSMGLASKYGHLNNGGYGARPNKPPTPDPSK 351 R+ ++DP+GL G NFY+Y N P+ D GL + +K + +K Sbjct: 710 RFTSEDPLGLAAGDSNFYRYVGNDPINRTDPSGLDESARVVTAPPEIIGGSKLVVVEGAK 769 Query: 352 LPDIAKQLRLPYPIDQASSAPNVFKTFFRALSPYDYTLYCRKWVKPNLTCTPQDDSQYPG 411 P++ + D F C + L Sbjct: 770 NPELNGFVGQLIHRDSQEVVVRTVDLPFGI---GMQDQLCVLRKQVELA----------- 815 Query: 412 MDTKTASDYLPQTNWPTTQLPPGYTCAEPYLFPDINKPDGPATAG 456 + + ++W L G C P AG Sbjct: 816 ---VRSGSVIKSSDWNAWFLKNGQPCTGFKTPVAAFGKSSPVNAG 857 Score = 68.3 bits (165), Expect = 6e-10, Method: Composition-based stats. Identities = 38/297 (12%), Positives = 73/297 (24%), Gaps = 46/297 (15%) Query: 12 HYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLV----------HYTRTQY 61 YD G+ + + + YD +L+ T Sbjct: 259 RLTMVYDAAGQQIRQVNPL---------GLRTTMAYDPAGKLIVKIDPRSLRVSTTYDAA 309 Query: 62 AEPLVE------SRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYG------WDG 109 + P V + YD G+ T YG W+ Sbjct: 310 SRPAVRNAAGSLMTWTYDAAGQPTITGTSVGRFTRTYDPIGQVVSLTYAYGQVLQWNWNA 369 Query: 110 DRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVF 169 + +T Y + + + + + + +S G + V+ Sbjct: 370 VGQRSRLIHPGGARTTYSYDANQRMTSLVNPQSQRTTWAYDANGQVVLKSVGNLVTTYVY 429 Query: 170 PPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHR 229 P R + S + R+ A+ + + ++ D Sbjct: 430 DPAG-----RTTAIGAGTFGSLFAYRYDAAGRKQTCIEDSGIRTTWS---------YDPA 475 Query: 230 G-LPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEESGLYYNRH 285 G L + G + YD GNLL + +G+Y + Sbjct: 476 GQLTTERANISGFSRTSYTYDPAGNLLVKTVDDDDSFSYTYNAANQQLSNGVYSYTY 532 Score = 55.2 bits (131), Expect = 5e-06, Method: Composition-based stats. Identities = 73/448 (16%), Positives = 118/448 (26%), Gaps = 84/448 (18%) Query: 12 HYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLV----------------- 54 Y+ GR T+ + E YD R++ Sbjct: 28 RTTTTYNLAGRPLRITNPLLERTTTL---------YDLAGRVIANINPLLQRSTTVYNAA 78 Query: 55 HYTRTQYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKP---------QVTWY 105 T +Q + +YD GR +A R++R T + + T Y Sbjct: 79 SETISQVNPLGYRTSSIYDGAGRLLASIDARQQRTTTIYDPAGQSIATVNALAQRSTTLY 138 Query: 106 GWDGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSG-GEDG 164 DG + +I R TIY + + + + + + + Sbjct: 139 DPDGRAMASINPLNGRSTTIY--NAASRTVAMLDPLNQRSTMLYDLAGRQIATINPLLQR 196 Query: 165 GSVVFPPVLVQMLD----RLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARK 220 + ++ P + S + D + A+ G + Sbjct: 197 VTTLYNPASQTIATINPLGYRSSTVYDAAGRTIVQVNANGGRVTTVYDRAGQTIANVDPL 256 Query: 221 IHLY--HCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEES 278 H D G + V+ G YD G L+ + +P L+ D S Sbjct: 257 AHRLTMVYDAAGQQIRQVNPLG-LRTTMAYDPAGKLIVKIDPRSLRVSTTY-----DAAS 310 Query: 279 GLYYNRHR------YYDPL---------QGRYI-TQDPIGLKGGWNFYQYPL------NP 316 YD GR+ T DPIG Y Y N Sbjct: 311 RPAVRNAAGSLMTWTYDAAGQPTITGTSVGRFTRTYDPIGQVVSL-TYAYGQVLQWNWNA 369 Query: 317 V----QYIDSMGLASKYGHLNNGGYGA-------RPNKPPTPDPSKLPDIAKQLRLPYPI 365 V + I G + Y + N + R + + L Y Sbjct: 370 VGQRSRLIHPGGARTTYSYDANQRMTSLVNPQSQRTTWAYDANGQVVLKSVGNLVTTYVY 429 Query: 366 DQASSAPNVFKTFFRALSPYDYTLYCRK 393 D A + F +L Y Y RK Sbjct: 430 DPAGRTTAIGAGTFGSLFAYRYDAAGRK 457 Score = 44.8 bits (104), Expect = 0.006, Method: Composition-based stats. Identities = 29/251 (11%), Positives = 63/251 (25%), Gaps = 39/251 (15%) Query: 3 PDNRIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYA 62 N+ + Y Y YD G D ++ + YD+ + + + A Sbjct: 518 AANQQLSNGVYSYTYDLAGNRRSMIDS---------NDNITTFTYDALNHNIAFESPLGA 568 Query: 63 EPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRI 122 Y + + + + + ++ Y WD + ++ + Sbjct: 569 ----VVTYTW----------APVNKANDERQIERNDGAEIVRYIWDDQSILKEVDEFGIV 614 Query: 123 --QTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRL 180 + QPG + LI + + Q+ Sbjct: 615 VAENTVQPGGYGKLISRREDDVTSRYLFDDLGSTRSLFDNSGPADEYRYEAFGRQISSTG 674 Query: 181 ESEILADRVSEESRRWLASCGLTVEQMQNQMD-----------PVYTPARKIHLYHCDHR 229 +E V E+ R GL + ++ + + Y + Sbjct: 675 STENPYTWVGEQGYRQDEETGLANLRARDYDPQAARFTSEDPLGLAAGDSNFYRYVGN-- 732 Query: 230 GLPLALVSTEG 240 P+ G Sbjct: 733 -DPINRTDPSG 742 >UniRef50_D1R7X9 Putative uncharacterized protein n=2 Tax=Parachlamydia acanthamoebae str. Hall's coccus RepID=D1R7X9_9CHLA Length = 1829 Score = 173 bits (437), Expect = 2e-41, Method: Composition-based stats. Identities = 67/401 (16%), Positives = 114/401 (28%), Gaps = 30/401 (7%) Query: 5 NRIARDAHYLY-----RYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRT 59 NR + +YD G LT + P G +Y YD ++L Sbjct: 1255 NRHRSIQSSYFSELDVQYDSVGNLTSQLFKDPIGETPC------KYSYDHLYQLSRE--- 1305 Query: 60 QYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDR 119 + + Y +D L R K + + + + Y +D + + D+ Sbjct: 1306 ---DSVSSHTYQHDSLLNRFTKDEQIFDYNSLNQLLGDKLG---AYTYDRNGNLAEKYDQ 1359 Query: 120 TRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDR 179 Y ++ LI V T L L + + Sbjct: 1360 K-----YAYDAWDRLISVTTEN-NRFTYVYDDLNRRLCKEAARWDPLTNEWTAEEKQYFL 1413 Query: 180 LESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTE 239 + E + + + + ++ C+ G L++T Sbjct: 1414 YQGENEIGSCDADYNMQELRVLGSGRGAEIGASIALEIGGETYIPLCNFAGNTQVLLNTS 1473 Query: 240 GATEWCAEYDEWGNLLNEENPHQLQQL---IRLPGQQYDEESGLYYNRHRYYDPLQGRYI 296 G Y +G + + + R ++YD E+G Y RYYDP R+ Sbjct: 1474 GEPVDIYRYTAFGEEVTLDASGATKNPITAWRFSSKRYDPETGFIYFGRRYYDPKIARWT 1533 Query: 297 TQDPIGLKGGWNFYQYPLN-PVQYIDSMGLASKYGHLNNGGYGARPNKPPTPDPSKLPDI 355 T DP+ G N Y Y N P+ +ID GL + R Sbjct: 1534 TADPLSFDAGPNLYAYVNNSPLTHIDLYGLWGFDWADDRHERKTRDRITTNVTNYSKSRE 1593 Query: 356 AKQLRLPYPIDQASSAPNVFKTFFRALSPYDYTLYCRKWVK 396 + ++ SA + YD T Sbjct: 1594 RSEEQVVAHSKGGISAFETLFPSSEPVQNYDLTDRVNPDTS 1634 Score = 70.2 bits (170), Expect = 2e-10, Method: Composition-based stats. Identities = 38/271 (14%), Positives = 67/271 (24%), Gaps = 42/271 (15%) Query: 12 HYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYL 71 + YD G + + E +R YD ++LV Q Y Sbjct: 636 RLHWEYDARGNIIRAVNANGEETLR---------QYDELNQLV---YEQGPNKAFHVEYS 683 Query: 72 YDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQPGSF 131 YD +GR + + + + +D D QT Y+ F Sbjct: 684 YDCVGRLTSATTVDHSTNQRYII---------RHQYDKRGNRISSTDWYGNQTHYEYDRF 734 Query: 132 TPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLES----EILAD 187 L++ + A Q + ++ + + EI Sbjct: 735 DRLVKTTHPSIPSANGQLFRPEERIEYNALGHITKITNGNGYSIDQKNTIRGKPFEINYP 794 Query: 188 RVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLP--------------- 232 S E + L +N M Y+ + ++ Sbjct: 795 DGSSERMTYNLDGTLQETIDKNGMTTRYSYDYQKRPIQIEYIASTGESLGIHTKEYSAFH 854 Query: 233 -LALVSTEGATEWCAEYDEWGNLLNEENPHQ 262 + + EG EYD G Sbjct: 855 LIREIDAEGHVT-SYEYDRLGRPKAVIKADA 884 Score = 57.1 bits (136), Expect = 1e-06, Method: Composition-based stats. Identities = 20/220 (9%), Positives = 49/220 (22%), Gaps = 31/220 (14%) Query: 8 ARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVE 67 + YD G+L + + + + ++ YD ++ Sbjct: 1034 QVIQERDFFYDGAGQLIQTQEKVFKLDAYDRQ-VVTQWTYDPIGQMTSCIEAVGTPEQKT 1092 Query: 68 S---------------------RYLYDPLGRRVAKRVWRRERDLTGWMSLSRKP------ 100 + Y YD GR + +L+ P Sbjct: 1093 TCHAYNNCSQKVVTYKPDGNQIAYAYDAKGRLATVTSTDQTISYAYTYNLNDIPILVEDL 1152 Query: 101 ---QVTWYGWDGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQ 157 + +D + + I+ Y L+ ++ Sbjct: 1153 IHQTQSQKTYDSNNNLIEEILGNGIKLSYAYDRQGRLLATTLPDQSSIVYMYNAVDLLAV 1212 Query: 158 QSGGEDGGSVVFPPVLVQMLDRLESEILADRVSEESRRWL 197 + G + L + L + ++ + Sbjct: 1213 KRLSSSGEKQYEQTYQYDLGGNLREKQLPFNLGTVTQSYD 1252 Score = 56.0 bits (133), Expect = 3e-06, Method: Composition-based stats. Identities = 38/302 (12%), Positives = 80/302 (26%), Gaps = 43/302 (14%) Query: 4 DNRIARD----AHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRT 59 NRI+ Y YDR RL + T R Y++ + T Sbjct: 714 GNRISSTDWYGNQTHYEYDRFDRLVKTTHPSIPSANGQLFRPEERIEYNALGHITKITNG 773 Query: 60 QYAEPLVESRYL-------YDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGD-- 110 ++ Y P G + D T ++ + T Y +D Sbjct: 774 NGYSIDQKNTIRGKPFEINY-PDG---SSERMTYNLDGTLQETIDKNGMTTRYSYDYQKR 829 Query: 111 --RLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVV 168 ++ I + + + S LIR A G + + L ++ + ++ Sbjct: 830 PIQIEYIASTGESLGIHTKEYSAFHLIREIDAEGHVTSYEYDRLGR--PKAVIKADAAIY 887 Query: 169 FPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDH 228 + D +++ + + + + D ++ ++Y Sbjct: 888 NTYDALGRKDTVKTFYGHTSGDYTLEVFEYDSKDRIVAERTEDDQGNILRKQTYVY---- 943 Query: 229 RGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQ---QYDEESGLYYNRH 285 G + Y + Q D ++ + + Sbjct: 944 --------DASGNKLQVSTYS-------DAGVGTTYFTYNFNNQPTKIVDPDNNITLINY 988 Query: 286 RY 287 RY Sbjct: 989 RY 990 Score = 53.3 bits (126), Expect = 2e-05, Method: Composition-based stats. Identities = 27/256 (10%), Positives = 58/256 (22%), Gaps = 54/256 (21%) Query: 18 DRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYLYDPLGR 77 D +G E + + + ++HYD L + YD G Sbjct: 600 DPNGN--EICVKRIRNLHNSIGKLYEQHHYDIGDNL-----------RYRLHWEYDARGN 646 Query: 78 RVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQPGSFTPLIRV 137 + E L + L ++L Q Y L Sbjct: 647 IIRAVNANGEETLRQYDEL-------------NQLVYEQGPNKAFHVEYSYDCVGRLTSA 693 Query: 138 ETATGELAKTQ-----RRSLADTLQQSGGEDGGSVVFPPVLVQM--------------LD 178 T + + + + + ++ L Sbjct: 694 TTVDHSTNQRYIIRHQYDKRGNRISSTDWYGNQTHYEYDRFDRLVKTTHPSIPSANGQLF 753 Query: 179 RLESEILADRVSEESRRWLASCGLTVEQMQNQMDP-----VYTPARKIHLYHCDHRGLPL 233 R E I + + ++ + ++ + P + ++ + G Sbjct: 754 RPEERIEYNALGHITKITNGNGYSIDQKNTIRGKPFEINYPDGSSERMTY---NLDGTLQ 810 Query: 234 ALVSTEGATEWCAEYD 249 + G YD Sbjct: 811 ETIDKNG-MTTRYSYD 825 Score = 50.6 bits (119), Expect = 1e-04, Method: Composition-based stats. Identities = 23/145 (15%), Positives = 39/145 (26%), Gaps = 20/145 (13%) Query: 13 YLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHR--LVHYTRTQYAEPLVESRY 70 Y YDR GR YD+ R V + + Sbjct: 866 TSYEYDRLGRPKAVIKADAAIYN----------TYDALGRKDTVKTFYGHTSGDYTLEVF 915 Query: 71 LYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRL-TTIQNDRTRIQTIYQPG 129 YD R VA+R + ++ + Q Y G++L + +D T + Sbjct: 916 EYDSKDRIVAERTEDDQGNIL-------RKQTYVYDASGNKLQVSTYSDAGVGTTYFTYN 968 Query: 130 SFTPLIRVETATGELAKTQRRSLAD 154 ++ + R Sbjct: 969 FNNQPTKIVDPDNNITLINYRYDYR 993 Score = 46.7 bits (109), Expect = 0.002, Method: Composition-based stats. Identities = 40/294 (13%), Positives = 78/294 (26%), Gaps = 45/294 (15%) Query: 4 DNRIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAE 63 D++ Y YD G + + GV T + Y+ ++ Sbjct: 930 DDQGNILRKQTYVYDASGNKLQVSTYSDAGVG------TTYFTYNFNNQPTKIVDPDNNI 983 Query: 64 PLVESRYLY--------------DPLGRRVAKRVWRRERDLTGW--MSLSRKPQVTWYGW 107 L+ RY Y DP G R + + + Q + + Sbjct: 984 TLINYRYDYRDAYNMVVPYSESIDPQGNVTISIGNARGKTAKIQKKNGMGQVIQERDFFY 1043 Query: 108 DGDRLTTIQ----------NDRTRIQTIYQP-GSFTPLIRVETATGELAKTQRRSLADTL 156 DG + + Q Y P G T I + + Sbjct: 1044 DGAGQLIQTQEKVFKLDAYDRQVVTQWTYDPIGQMTSCIEAVGTPEQKTTCHAYNNCSQK 1103 Query: 157 QQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYT 216 + DG + + + + ++++ + + L + + T Sbjct: 1104 VVTYKPDGNQIAYAYD-------AKGRLATVTSTDQTISYAYTYNLNDIPILVEDLIHQT 1156 Query: 217 PARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRLP 270 ++K + D + + G + YD G LL P Q + Sbjct: 1157 QSQKTY----DSNNNLIEEILGNG-IKLSYAYDRQGRLLATTLPDQSSIVYMYN 1205 >UniRef50_B5S3N8 Rhs-related protein n=1 Tax=Ralstonia solanacearum RepID=B5S3N8_RALSO Length = 1714 Score = 173 bits (437), Expect = 2e-41, Method: Composition-based stats. Identities = 70/360 (19%), Positives = 115/360 (31%), Gaps = 45/360 (12%) Query: 15 YRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYLYDP 74 Y D R+ + EG+ H Y YD+ RL+ + + RY YD Sbjct: 1270 YETDAENRIVSLLEAGREGLKP------HWYRYDAADRLLA----DDSRSWNDRRYSYDA 1319 Query: 75 LGRRVA---KRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQPGSF 131 R + + + + Q T Y G+ L Y + Sbjct: 1320 ADNRTSATSRTAKQTIVPNALNQMQTVNGQPTQYDAAGNLLEDEARQ-------YDWDAE 1372 Query: 132 TPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSE 191 LIR+ +T+ + E G+ V + + + A+ Sbjct: 1373 HRLIRIRYKAQAGKETRFGYDGLGRRTVITEVDGTGTTETHYVWCGEAICQKRDANGQLL 1432 Query: 192 ESRRWLASCGLTVEQMQNQMDPVYTPARK------------------------IHLYHCD 227 + G + + + D +Y + Sbjct: 1433 RAYYPEGESGPEIGKRVAKADAGTETDADGDEHDGRGQDGDDGKSAPQTESTGSLIYARN 1492 Query: 228 HRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEESGLYYNRHRY 287 H G ++ +G EY +G L+ + + + G QY SG+Y R Sbjct: 1493 HLGSVTDTLTPDGRAVTHTEYGPYGELVKSQGRAEYRSDFGYAGMQYHAASGMYLTLFRA 1552 Query: 288 YDPLQGRYITQDPIGLKGGWNFYQYPL-NPVQYIDSMGLASKYGHLNNGGYGARPNKPPT 346 YDP GR++++DPIG +GG+N Y Y NP+ Y D G G L G+ T Sbjct: 1553 YDPGTGRWVSRDPIGERGGFNLYGYVNGNPIGYRDPRGTNPLTGALTGAEIGSIAGPIGT 1612 Score = 68.3 bits (165), Expect = 7e-10, Method: Composition-based stats. Identities = 44/254 (17%), Positives = 69/254 (27%), Gaps = 31/254 (12%) Query: 14 LYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRY--- 70 Y YD GR+ +TD + RT +Y YD+ +RL Sbjct: 872 SYAYDAIGRIASQTDS---------EGRTVKYQYDALNRLTLTQYPDGTTRRQTWDKLDL 922 Query: 71 --LYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQP 128 D LGR R + L R+ Q Y +G T Q Sbjct: 923 ASTTDRLGRVTRYTYDSARRLVQVTDPLGRRIQ-YGYYPNGKLKTLTDAAGNVTTW--QR 979 Query: 129 GSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADR 188 +I A G+ + L++ G S F + + L+ + Sbjct: 980 DIQGRVISKTYADGKGDTLAYEATTSRLKRITDALGQSKTFSYTMDDRVAELDYSGATNP 1039 Query: 189 VSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLP-----LALVSTEGATE 243 + S R+ ++ T H Y + G P + Sbjct: 1040 TASVSYRYDSAYPRI---------SSVTDGTGSHNYSYNAVGSPGANRVSEETVPGQSDT 1090 Query: 244 WCAEYDEWGNLLNE 257 +YD G Sbjct: 1091 LRTQYDALGRPTER 1104 Score = 60.6 bits (145), Expect = 1e-07, Method: Composition-based stats. Identities = 36/271 (13%), Positives = 72/271 (26%), Gaps = 50/271 (18%) Query: 6 RIARDAHY---LYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHR---LVHYTRT 59 R+ D Y+ G +T ++D + + YD ++ R Sbjct: 750 RVLDDGSTQLMRTSYNAQGNVTAQSDAVGRQAL-----------YDYADNGIDVLRVKRV 798 Query: 60 QYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDR 119 + + Y Y Q+T Y ++ T + + Sbjct: 799 NGGSTDLLAEYTY--------------NDQHEPLTYRDAAGQLTTYTYNAAGQQTGETNA 844 Query: 120 TRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDR 179 T ++ + L RV A G+ A + + +G +V + + L Sbjct: 845 LGQTTRWEYDANGFLQRVVNANGKTAASYAYDAIGRIASQTDSEGRTVKYQYDALNRLTL 904 Query: 180 LESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPA--RKIHLYHCDHRGLPLALVS 237 + G T Q +++D T ++ Y D + + Sbjct: 905 TQ----------------YPDGTTRRQTWDKLDLASTTDRLGRVTRYTYDSARRLVQVTD 948 Query: 238 TEGATEWCAEYDEWGNLLNEENPHQLQQLIR 268 G Y G L + + Sbjct: 949 PLGRRI-QYGYYPNGKLKTLTDAAGNVTTWQ 978 Score = 57.9 bits (138), Expect = 8e-07, Method: Composition-based stats. Identities = 57/441 (12%), Positives = 98/441 (22%), Gaps = 53/441 (12%) Query: 33 GVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYLYDPLGRRVAKRVWRRERDLTG 92 I + YDSQ RL T D G+R Sbjct: 526 TQIIDREGNAVTLSYDSQQRLTAIT---------------DAAGKRTTFTYGNASNSTLV 570 Query: 93 WMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSL 152 + G+D + D +++ + + T + + T G + Sbjct: 571 TQITDPFGRTARLGYDASGRLSDITDAIGMKSSFSYDAGTFINALTTPYGTTKFAYGENG 630 Query: 153 ADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMD 212 G + +S + Sbjct: 631 VQRWINITNPQGQTERVEYRHQAPGLSYTESQTPGGMSVFNTFINYRNTFYWNADAYAQA 690 Query: 213 P-VYTPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRLPG 271 P YT AR H H ++ + + + A + + N +Q + Sbjct: 691 PDDYTKARITHWLHTNNINMTAGAIESTKAPLENRVWYTYANQPFPAGVGSTEQPTAVAR 750 Query: 272 QQYDEESGLYYNRHRYYDPLQGRYITQDPIGLKGGWNFYQYPLN---------------- 315 D + L Y+ D +G + Y Y N Sbjct: 751 VLDDGSTQLMRTS---YNAQGNVTAQSDAVGRQA---LYDYADNGIDVLRVKRVNGGSTD 804 Query: 316 ------------PVQYIDSMGLASKYGHLNNGGYGARPNKPPTPDPSKLPDIAKQLRLPY 363 P+ Y D+ G + Y + G N + R+ Sbjct: 805 LLAEYTYNDQHEPLTYRDAAGQLTTYTYNAAGQQTGETNALGQTTRWEYDANGFLQRVVN 864 Query: 364 PIDQ--ASSAPNVFKTFFRALSPYDYTLYCRKWVKPNLTCTPQDDSQYPGMDTKTASDYL 421 + AS A + T+ + LT T D D Sbjct: 865 ANGKTAASYAYDAIGRIASQTDSEGRTVKYQYDALNRLTLTQYPDGTTRRQTWDKL-DLA 923 Query: 422 PQTNWPTTQLPPGYTCAEPYL 442 T+ Y A + Sbjct: 924 STTDRLGRVTRYTYDSARRLV 944 Score = 56.0 bits (133), Expect = 3e-06, Method: Composition-based stats. Identities = 25/208 (12%), Positives = 43/208 (20%), Gaps = 20/208 (9%) Query: 27 TDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYLYDPLGRRVAKRVWRR 86 D R + Y Y++ + T +R+ YD G Sbjct: 812 NDQHEPLTYRDAAGQLTTYTYNAAGQQTGETNALG----QTTRWEYDANG---------- 857 Query: 87 ERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAK 146 + + Y +D Q D YQ + L + G + Sbjct: 858 ---FLQRVVNANGKTAASYAYDAIGRIASQTDSEGRTVKYQYDALNRLTLTQYPDGTTRR 914 Query: 147 TQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQ 206 L + + + + Sbjct: 915 QTWDKLDLASTTDRLGRVTRYTYDSARRLVQVTDPLGRRIQYGYYPNGKLKTLTDAAGNV 974 Query: 207 MQNQMDPVYTPARKIHLYHCDHRGLPLA 234 Q D K + D +G LA Sbjct: 975 TTWQRDIQGRVISKTY---ADGKGDTLA 999 Score = 53.7 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 61/460 (13%), Positives = 116/460 (25%), Gaps = 64/460 (13%) Query: 8 ARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVE 67 YD RLT TD + + Y + T+ Sbjct: 531 REGNAVTLSYDSQQRLTAITDAA---------GKRTTFTYGNASNSTLVTQITDPFG-RT 580 Query: 68 SRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQ 127 +R YD GR + + + + +T + Y Sbjct: 581 ARLGYDASGRLSDITDAIGMKSSFSYDAGTFINALT-------------TPYGTTKFAYG 627 Query: 128 PGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGG------SVVFPPVLVQMLDRLE 181 I + G+ + + R A L + + G + + Sbjct: 628 ENGVQRWINITNPQGQTERVEYRHQAPGLSYTESQTPGGMSVFNTFINYRNTFYWNADAY 687 Query: 182 SEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCD----HRGLPL---- 233 ++ D WL + + + + R + Y G Sbjct: 688 AQAPDDYTKARITHWLHTNNINMTAGAIESTKAPLENRVWYTYANQPFPAGVGSTEQPTA 747 Query: 234 --ALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRLP-------------GQQYDEES 278 ++ Y+ GN+ + + Q L G D + Sbjct: 748 VARVLDDGSTQLMRTSYNAQGNVTAQSDAVGRQALYDYADNGIDVLRVKRVNGGSTDLLA 807 Query: 279 GLYYNRHRYYDPLQGRYITQDPIGLKGGWNFYQY--PLNPVQYIDSMGLASKYGHLNNGG 336 YN ++PL R G Y Y +++G +++ + NG Sbjct: 808 EYTYNDQ--HEPLTYR-------DAAGQLTTYTYNAAGQQTGETNALGQTTRWEYDANGF 858 Query: 337 YGARPNKPPTPDPSKLPDIAKQLRLPYPIDQASSAPNVFKTFFRALSPY-DYTLYCRKWV 395 N S D ++ + + L+ Y D T + W Sbjct: 859 LQRVVNANGKTAASYAYDAIGRIASQTDSEGRTVKYQYDALNRLTLTQYPDGTTRRQTWD 918 Query: 396 KPNLTCTPQDDSQYPGMDTKTASDYLPQTNWPTTQLPPGY 435 K +L T + +A + T+ ++ GY Sbjct: 919 KLDLASTTDRLGRVTRYTYDSARRLVQVTDPLGRRIQYGY 958 Score = 52.1 bits (123), Expect = 4e-05, Method: Composition-based stats. Identities = 39/294 (13%), Positives = 69/294 (23%), Gaps = 44/294 (14%) Query: 7 IARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDS-----QHRLVHYTRTQY 61 A YRYD P TD +H Y Y++ +R+ T Sbjct: 1037 TNPTASVSYRYDSA---------YPRISSVTDGTGSHNYSYNAVGSPGANRVSEETVPGQ 1087 Query: 62 AEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVT-----WYGWDGDRLTTIQ 116 ++ L YD LGR +R+ + + T Y + G+ T Sbjct: 1088 SDTLRT---QYDALGRPTERRIGSLSETWSYDALGRQVGHGTPLGQFSYAYLGETGQTSS 1144 Query: 117 ----NDRTRIQTIYQPGSFTPLIRVETATGE---LAKTQRRSL------------ADTLQ 157 + R + Y+ ++ G + Sbjct: 1145 QQLEGSQLRTEYRYEDNRNDRRLKAIDNDGAMKGGWTGGYGDRDQDALAGSLHMQGGRMP 1204 Query: 158 QSGGEDGGSVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTP 217 G G R + + + Sbjct: 1205 TGDGWHDGGRWNEGDRWHEGGRWN-DGDRWHEGGRHGDYGHHERAPWPPFGHGHGGASAH 1263 Query: 218 ARKIHLYHCDHRGLPLALVST--EGATEWCAEYDEWGNLLNEENPHQLQQLIRL 269 + Y D ++L+ EG YD LL +++ + Sbjct: 1264 SASSFFYETDAENRIVSLLEAGREGLKPHWYRYDAADRLLADDSRSWNDRRYSY 1317 Score = 51.7 bits (122), Expect = 6e-05, Method: Composition-based stats. Identities = 23/239 (9%), Positives = 56/239 (23%), Gaps = 31/239 (12%) Query: 2 WPDNRIARDAH-----YLYRYDRHGRLTEKTDLIPEG-------------VIRTDDERTH 43 +P+ ++ ++ D GR+ KT +G I ++ Sbjct: 959 YPNGKLKTLTDAAGNVTTWQRDIQGRVISKTYADGKGDTLAYEATTSRLKRITDALGQSK 1018 Query: 44 RYHYDSQHRLVHYTRTQYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVT 103 + Y R+ + P Y YD R++ + ++ Sbjct: 1019 TFSYTMDDRVAELDYSGATNPTASVSYRYDSAYPRISSVTDGTGSHNYSYNAVGSPG--- 1075 Query: 104 WYGWDGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGED 163 +R++ Q + +L + G Sbjct: 1076 -----ANRVSEETVPGQSDTLRTQYDALGRPTE-RRIGSLSETWSYDALGRQV----GHG 1125 Query: 164 GGSVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIH 222 F + + S+ L R+ + + + + + Sbjct: 1126 TPLGQFSYAYLGETGQTSSQQLEGSQLRTEYRYEDNRNDRRLKAIDNDGAMKGGWTGGY 1184 Score = 49.4 bits (116), Expect = 3e-04, Method: Composition-based stats. Identities = 27/193 (13%), Positives = 44/193 (22%), Gaps = 27/193 (13%) Query: 3 PDNRIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYA 62 + D Y +D RL + R+ YD R Sbjct: 1355 AAGNLLEDEARQYDWDAEHRLIRIRYKAQA-------GKETRFGYDGLGRRT-VITEVDG 1406 Query: 63 EPLVESRYLY---------DPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGD--- 110 E+ Y++ D G+ + E +++ T DGD Sbjct: 1407 TGTTETHYVWCGEAICQKRDANGQLLRAYYPEGESGPEIGKRVAKADAGTETDADGDEHD 1466 Query: 111 -------RLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGED 163 + + IY + T G L +S G Sbjct: 1467 GRGQDGDDGKSAPQTESTGSLIYARNHLGSVTDTLTPDGRAVTHTEYGPYGELVKSQGRA 1526 Query: 164 GGSVVFPPVLVQM 176 F +Q Sbjct: 1527 EYRSDFGYAGMQY 1539 >UniRef50_B4B5R8 YD repeat protein n=1 Tax=Cyanothece sp. PCC 7822 RepID=B4B5R8_9CHRO Length = 7225 Score = 173 bits (437), Expect = 2e-41, Method: Composition-based stats. Identities = 69/317 (21%), Positives = 113/317 (35%), Gaps = 29/317 (9%) Query: 25 EKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVE-SRYLYDPLGRRVAKRV 83 E++ + I +D YDS RL A L+E Y YD G+R+ K Sbjct: 6688 ERSGIGEPTKIIREDGSYTLLAYDSALRLTQEAYYDGAGTLLEKMSYSYDESGKRITKID 6747 Query: 84 WRRERDLTGWMSL-----SRKPQVTWYGWDGD-RLTTIQNDRTRIQTIYQPGSFTPLIRV 137 + + + Y +D + RLT + D + + F L V Sbjct: 6748 KAGNHNYNYQSDYQLTSITEASETEAYTYDNNGRLTLVSRDGQTLDLNH--DVFDHLTEV 6805 Query: 138 ETAT-GELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSEESRRW 196 E T G + + G + P + +++L+D + Sbjct: 6806 ENQTTGTTLEYTYDGEGRRISAIEGSTVRQFLVAPAMG--GGLESTDLLSDEQGNLLANY 6863 Query: 197 LASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLN 256 + + ++ +P+ Y D G + L + G YD +GN+ Sbjct: 6864 IYAGNTPFMRLDANGNPI--------YYLTDGIGSVIGLANATGQNIGKFVYDSFGNIRV 6915 Query: 257 EEN----PHQLQQLIRLPGQQYDEESGLYYNRHRYYDPLQGRYITQDPIG----LKGGWN 308 P + R GQ + E+GLYY R R YDP GR++++DP+ +N Sbjct: 6916 ASGSGINPAKTGGDFRFQGQWLESETGLYYLRARDYDPKTGRFLSRDPVDIIETEPESFN 6975 Query: 309 FYQYP-LNPVQYIDSMG 324 YQ+ NP Y D G Sbjct: 6976 AYQFAYNNPQIYSDPTG 6992 Score = 86.0 bits (211), Expect = 3e-15, Method: Composition-based stats. Identities = 60/419 (14%), Positives = 101/419 (24%), Gaps = 80/419 (19%) Query: 13 YLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRY---------------HYDSQHRLVHYT 57 Y+YD G L TD D+R Y Y+ + RLV Sbjct: 5973 IQYQYDAKGDLIAITDRENNKTEFVYDDRQPHYLEEVIDPLDRNGAKAQYNDEGRLVKLI 6032 Query: 58 RTQYAEPLVE-----------------SRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKP 100 +T + Y YD G + + + Sbjct: 6033 KTDGNAVEWVYDPDNFLQTVKDGLGNPTTYEYDERGNVITIIDPLGNISQFTYDDKNNLT 6092 Query: 101 -------QVTWYGWDGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLA 153 T Y +D + Y S+ L ++ +TG K Sbjct: 6093 SETDPLGNETIYTYDAQGNILTKTAPNGELVRYAYDSYGQLTQLNLSTGASFKWDYDRRG 6152 Query: 154 DTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDP 213 + L G+ + + D + L Sbjct: 6153 NLLSIKDGDGKVINFYTYDNSGRVIS-----EGDSFGTSFYTYDNLGNLIE--------- 6198 Query: 214 VYTPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQ 273 P KI + G + ++ +G YD+ G N + + G Sbjct: 6199 QKDPNGKITKMEYNTAGNLIKMIDPDGRVA-TFSYDKQGRKTNADYGEGISVNYSYTGSL 6257 Query: 274 YDEES-----------GLYYNRHRYYDPLQGRYITQDPIGLKGGWNFYQY--PLNPVQYI 320 + + L N ++ D G Y+Y + Sbjct: 6258 NEWTTAEGPTIGKIERKLTSNG------KLAGWVAPD-----GSTLTYEYDAAGRLTKET 6306 Query: 321 DSMGLASKYGHLNNGGYGARPNKPPTPDPSKLPDIAKQLRLPYPIDQASSAPNVFKTFF 379 D G ++Y + G N T + D K R+ ID +A + Sbjct: 6307 DPSGKITEYTYDAAGRLIKIKN--ATTGATVTRDYDKVGRVIKEIDPFGNATTYTYVPY 6363 Score = 79.5 bits (194), Expect = 3e-13, Method: Composition-based stats. Identities = 38/254 (14%), Positives = 64/254 (25%), Gaps = 33/254 (12%) Query: 4 DNRI-----ARDAHYLYRYDRHGRLTEKT-----------DLIPEGVIRTDDERTHRYHY 47 DNR+ Y+YD G +T + + T YHY Sbjct: 6515 DNRLVKVTLPNGETLTYQYDEAGNVTSQVISTGETIETTYTTSGSIATSKNAAGTITYHY 6574 Query: 48 DSQHRLVHYTRTQYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGW 107 D+ L + E D LGR +T Y + Sbjct: 6575 DTNGNLQGIEYPNGSSIFYER----DVLGRVTKITETASGSITAA---------LTRYTY 6621 Query: 108 DGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSV 167 D D T T L+ G + + G+V Sbjct: 6622 DEVGNLKTITDPTGGVTTMTYDQINRLVERILPNGVKTTYTYNTQDHVISIVHKNTDGTV 6681 Query: 168 VFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCD 227 + + ++I+ + S + ++ LT E + + Y D Sbjct: 6682 LASVTYERSGIGEPTKIIREDGSYTLLAYDSALRLTQEAYYDGAGTLLEKMS----YSYD 6737 Query: 228 HRGLPLALVSTEGA 241 G + + G Sbjct: 6738 ESGKRITKIDKAGN 6751 Score = 71.4 bits (173), Expect = 6e-11, Method: Composition-based stats. Identities = 67/482 (13%), Positives = 119/482 (24%), Gaps = 68/482 (14%) Query: 7 IARDAHYLYRYDRH-GRLTEKTDLIPEGVIRTDDERTH------RYHYDSQHRLVHYTRT 59 + Y+ D G + T+ + TD T + DS+ R+ Sbjct: 5909 LTTQDGIAYQIDAQTGDINSITNTNGNKLSFTDAGITSSTGQQITFERDSKGRITAVI-- 5966 Query: 60 QYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDR 119 DPLG ++ Y GD + + Sbjct: 5967 -------------DPLGNKIQ----------------------YQYDAKGDLIAITDREN 5991 Query: 120 TRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPV------- 172 + + +Y L V + + L + DG +V + Sbjct: 5992 NKTEFVYDDRQPHYLEEVIDPLDRNGAKAQYNDEGRLVKLIKTDGNAVEWVYDPDNFLQT 6051 Query: 173 -LVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGL 231 + + E L + +N + P +Y D +G Sbjct: 6052 VKDGLGNPTTYEYDERGNVITIIDPLGNISQFTYDDKNNLTSETDPLGNETIYTYDAQGN 6111 Query: 232 PLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQ-----QYDEESGLYYNRHR 286 L + G YD +G L + D + + Sbjct: 6112 ILTKTAPNGELV-RYAYDSYGQLTQLNLSTGASFKWDYDRRGNLLSIKDGDGKVINFYT- 6169 Query: 287 YYDPLQGRYITQDPIGLKGGWNFYQYPL--NPVQYIDSMGLASKYGHLNNGGYGARPNKP 344 YD GR I++ G G +FY Y N ++ D G +K + G + Sbjct: 6170 -YD-NSGRVISE---GDSFGTSFYTYDNLGNLIEQKDPNGKITKMEYNTAGNLIKMIDPD 6224 Query: 345 PTPDPSKLPDIAKQLRLPY--PIDQASSAPNVFKTFFRALSPYDYTLYCRKWVKPNLTCT 402 ++ Y I S + A P + + L Sbjct: 6225 GRVATFSYDKQGRKTNADYGEGISVNYSYTGSLNEWTTAEGPTIGKIERKLTSNGKLAGW 6284 Query: 403 PQDDSQYPGMDTKTASDYLPQTNWPTTQLPPGYTCAEPYLFPDINKPDGPATAGIDDLGE 462 D + A +T+ Y A + T D +G Sbjct: 6285 VAPDGSTLTYEYDAAGRLTKETDPSGKITEYTYDAAGRLIKIKNATTGATVTRDYDKVGR 6344 Query: 463 IL 464 ++ Sbjct: 6345 VI 6346 Score = 69.8 bits (169), Expect = 2e-10, Method: Composition-based stats. Identities = 38/295 (12%), Positives = 77/295 (26%), Gaps = 39/295 (13%) Query: 10 DAHYLYRYDRHGRLTEKTDLIPEGV------------IRTDDERTHRYHYDSQHRLVHYT 57 Y YD G L E+ D + + D R + YD Q R + Sbjct: 6183 FGTSFYTYDNLGNLIEQKDPNGKITKMEYNTAGNLIKMIDPDGRVATFSYDKQGRKTNAD 6242 Query: 58 RTQYAEPLVESRYLYD--------PLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDG 109 + + Y Y G + K + + ++ Y +D Sbjct: 6243 YGEG----ISVNYSYTGSLNEWTTAEGPTIGKIERKLTSNGKLAGWVAPDGSTLTYEYDA 6298 Query: 110 DRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVF 169 T + D + T Y + LI+++ AT T+ + + G + + Sbjct: 6299 AGRLTKETDPSGKITEYTYDAAGRLIKIKNATTGATVTRDYDKVGRVIKEIDPFGNATTY 6358 Query: 170 PPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQ----------MQNQMDPVYTPAR 219 V + ++ + + + + + + + + + Sbjct: 6359 TYVPYEDEIASVTDAKGNTWTYDYTETTTTVTDPLGRKTTLVKSPYFLPIETRYSDGKKQ 6418 Query: 220 KIHLYHCDHR----GLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRLP 270 I + P V G YD +G L + Sbjct: 6419 SIEYLLNNSLQEAENYPTRFVDIGGNDRA-FTYDSFGRLKTATDLGNAIYTYAYS 6472 Score = 66.8 bits (161), Expect = 2e-09, Method: Composition-based stats. Identities = 33/253 (13%), Positives = 69/253 (27%), Gaps = 33/253 (13%) Query: 6 RIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPL 65 ++ A + + YDR G L D D + + Y YD+ R++ + Sbjct: 6137 NLSTGASFKWDYDRRGNLLSIKDG--------DGKVINFYTYDNSGRVISE-----GDSF 6183 Query: 66 VESRYLYDPLGRRVAKRVWRRERDLTGWMSLSR-------KPQVTWYGWDGDRLTTIQND 118 S Y YD LG + ++ + + + +V + +D T + Sbjct: 6184 GTSFYTYDNLGNLIEQKDPNGKITKMEYNTAGNLIKMIDPDGRVATFSYDKQGRKTNADY 6243 Query: 119 RTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLD 178 I Y ++ + L DG ++ + L Sbjct: 6244 GEGISVNYSYTGSLNEWTTAEGPTIGKIERKLTSNGKLAGWVAPDGSTLTYEYDAAGRLT 6303 Query: 179 RLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVST 238 + S + + + +++N D G + + Sbjct: 6304 K------ETDPSGKITEYTYDAAGRLIKIKNATTGATVTRD------YDKVGRVIKEIDP 6351 Query: 239 EGATEWCAEYDEW 251 G Y + Sbjct: 6352 FGNAT-TYTYVPY 6363 Score = 66.8 bits (161), Expect = 2e-09, Method: Composition-based stats. Identities = 34/248 (13%), Positives = 59/248 (23%), Gaps = 38/248 (15%) Query: 26 KTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYLYDPLGRRVAKRVWR 85 + + YDS RL T A Y Y Sbjct: 6429 QEAENYPTRFVDIGGNDRAFTYDSFGRLKTATDLGNA----IYTYAY------------- 6471 Query: 86 RERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELA 145 D +S + Y +D + G+ L++V GE Sbjct: 6472 --SDDGLTQIISPTGETRKYSYDDLGNLKTITYDNNTVKQLEYGNDNRLVKVTLPNGETL 6529 Query: 146 KTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVE 205 Q G V+ ++ I + + + + ++ Sbjct: 6530 TYQYD--------EAGNVTSQVISTGETIETTYTTSGSIATSKNAAGTITYHYDTNGNLQ 6581 Query: 206 QMQNQMDPVYTPARKIHLYHCDHRGLPLALV-STEGATEW---CAEYDEWGNLLNEENPH 261 ++ P Y D G + + G+ YDE GNL +P Sbjct: 6582 GIEY-------PNGSSIFYERDVLGRVTKITETASGSITAALTRYTYDEVGNLKTITDPT 6634 Query: 262 QLQQLIRL 269 + Sbjct: 6635 GGVTTMTY 6642 Score = 63.7 bits (153), Expect = 2e-08, Method: Composition-based stats. Identities = 44/298 (14%), Positives = 80/298 (26%), Gaps = 55/298 (18%) Query: 9 RDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVES 68 + Y YD GRLT++TD + Y YD+ RL+ + Sbjct: 6288 DGSTLTYEYDAAGRLTKETD---------PSGKITEYTYDAAGRLIKIKNATTGATVTR- 6337 Query: 69 RYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTR------- 121 YD +GR + + ++ + G+ T + T Sbjct: 6338 --DYDKVGRVIKEIDPFGNATTYTYVPYEDEIASVT-DAKGNTWTYDYTETTTTVTDPLG 6394 Query: 122 -------------IQTIYQPG---------------SFTPLIRVETATGELAKTQRRSLA 153 I+T Y G + R G S Sbjct: 6395 RKTTLVKSPYFLPIETRYSDGKKQSIEYLLNNSLQEAENYPTRFVDIGGNDRAFTYDSFG 6454 Query: 154 DTLQQSGGEDG-GSVVFPPVLVQMLDRLESEILADRVSEE-SRRWLASCGLTVEQMQNQM 211 + + + + + + E + + + + TV+Q++ Sbjct: 6455 RLKTATDLGNAIYTYAYSDDGLTQIISPTGETRKYSYDDLGNLKTITYDNNTVKQLEYGN 6514 Query: 212 DP----VYTPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQ 265 D V P + Y D G + V + G T Y G++ +N Sbjct: 6515 DNRLVKVTLPNGETLTYQYDEAGNVTSQVISTGETI-ETTYTTSGSIATSKNAAGTIT 6571 >UniRef50_Q7MZ20 Insecticidal toxin complex protein TccC7 n=4 Tax=Photorhabdus RepID=Q7MZ20_PHOLL Length = 936 Score = 173 bits (437), Expect = 2e-41, Method: Composition-based stats. Identities = 63/414 (15%), Positives = 124/414 (29%), Gaps = 48/414 (11%) Query: 7 IARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERT--HRYHYDSQHRLVHYTRTQYAEP 64 Y YD G + + + + + Y YDS ++L+ T + A Sbjct: 310 TKPLQDLRYEYDPVGNVINIRNDAEATRFWRNQKIVPENAYSYDSLYQLIQATGREMANI 369 Query: 65 LVE----------------------SRYLYDPLGRRVAKRVW--RRERDLTGWMSLSRKP 100 + Y YD G + + T +++S + Sbjct: 370 GQQGSQLPPLITPLPTDDNTYTNYIRTYTYDDSGNLTQIQHSAPASNNNYTTNITISNRN 429 Query: 101 QV---TWYGWDGDRLTTIQNDRTRIQTIYQPGSFTPLIRVE------TATGELAKTQRRS 151 + D + + T + +++ S R E + S Sbjct: 430 NRGVLSTLTNDPNLVDTFFDAGGHQTSLFSGQSLNWTPRGELQQVNQSGNTAREWYHYDS 489 Query: 152 LADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSEESRRWL----ASCGLTVEQM 207 L + + + + + + E + + A Sbjct: 490 DGMRLLKINEQQTSNTTQQQRVTYLPGLELHTTQSGTNITEDLQVITVRQAGKAQVRVLH 549 Query: 208 QNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLI 267 + P ++ + + + G EY +G +Q++ Sbjct: 550 WEKGQPTGINNDQVRYSYDNLTHSSELELDMHGEMISWEEYYPYGGTAVWAARNQIEAGY 609 Query: 268 ---RLPGQQYDEESGLYYNRHRYYDPLQGRYITQDPIGLKGGWNFYQYP-LNPVQYIDSM 323 R G++ D +GLYY +RYY P GR+++ DP G G N Y+ NP+ ID Sbjct: 610 KTIRYSGKERDA-TGLYYYGYRYYQPWAGRWLSADPAGTVDGLNLYRMVRNNPMTGIDED 668 Query: 324 GLASKYGHLNNGGYGARPNKPPTPDPSKLPDIAKQLRLPYPIDQASSAPNVFKT 377 G K G G + ++ ++ ++P P+ ++ V K Sbjct: 669 GRMFKTVATGALGIGGMAYELYKYKNQQV----EKPQMPSPVSESYGDQQVSKI 718 >UniRef50_Q88FK6 RHS family protein, putative n=1 Tax=Pseudomonas putida KT2440 RepID=Q88FK6_PSEPK Length = 1530 Score = 172 bits (436), Expect = 2e-41, Method: Composition-based stats. Identities = 80/472 (16%), Positives = 144/472 (30%), Gaps = 69/472 (14%) Query: 7 IARDAHYLYRYDRHGRLTE--KTDLIPEGVIRTDDERT---------------------- 42 + YRYD L T G+ ++ Sbjct: 1067 VLPLLDKAYRYDASDNLIAEVLTQTQRRGMSNAANDENANLEQIIGRFLDLPHTGKTYSG 1126 Query: 43 -HRYHYDSQHRLVHYTRTQYA-EPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKP 100 +RY YD +L +++ + + YD G + Sbjct: 1127 HNRYGYDLNEQLQTVHQSRPNWQATQVEDFKYDKAGNLFDGPKLNGLIKHNRVLVY---- 1182 Query: 101 QVTWYGWDGDRLTTIQNDRTRIQTIYQPGSFTPLI---RVETATGELAKTQRRSLADTLQ 157 Q Y +D + + ++ + L+ + + E L + Sbjct: 1183 QDKRYRYDRFGRLCEKRIGSNWVQYFEYDAEQRLVCVEQYRSGERERVVFAYDPLGRRIS 1242 Query: 158 QSGGEDG-----GSVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMD 212 + + V+F ++L ++S + + V + + Sbjct: 1243 KEVYQRDYPEPRRRVLFHWQGFRLLQEVQSGLASLYVYATVESYD-------PLARVDGK 1295 Query: 213 PVYTPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQL--QQLIRLP 270 P + IH +H G P L ++G T W +++ WG ++NE + Q +Q +R Sbjct: 1296 P---GSEAIHYFHTTLVGQPEQLTDSDGNTIWRSDHHGWGKIINEWHSQQNGREQNLRNQ 1352 Query: 271 GQQYDEESGLYYNRHRYYDPLQGRYITQDPIGLKGGWNFYQYPLNPVQYIDSMGLASK-- 328 GQ D E+GL++N R+YDP GR+ T DP+G++GG N Y Y N V Y D +GL + Sbjct: 1353 GQYIDRETGLHFNIFRFYDPDIGRFTTTDPLGIEGGVNLYSYAPNIVNYSDPLGLCPENV 1412 Query: 329 ---------------YGHLNNGGYGARPNKPPTPDPSKLPDIAKQLRLPYPIDQASSAPN 373 H A N P L + Sbjct: 1413 KEYDITPYRPSNSPLENHHGILDIWAAQNVPSYGGKYPKGSPTIVLSSKNHAATKAVYRE 1472 Query: 374 VFKTFFRALSPYDYTLYCRKWVKPNLTCTPQDDSQYPGMDTKTASDYLPQTN 425 + P + + + + G+ + + Y N Sbjct: 1473 WLREKTG--KPVGGKVDWSQISNREVMQLSERMFDVAGVPATSRTSYYRALN 1522 Score = 82.9 bits (203), Expect = 2e-14, Method: Composition-based stats. Identities = 44/286 (15%), Positives = 79/286 (27%), Gaps = 32/286 (11%) Query: 10 DAHYLYRYDRHGRLTEKTDLIPEG------------VIRTDDERTHRYHYDSQHRLVHYT 57 Y+YD GR+T+ TD + + R YHYD+ RL Sbjct: 706 GRETQYQYDPEGRVTQVTDALEKSKYLSWNTCGQLLSYRDCSNAQTLYHYDAHGRLRESI 765 Query: 58 RTQYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQ-------VTWYGWDGD 110 + + + YD G V D + + + +D Sbjct: 766 NARG----EHTHFRYDARGYLVESERPDGRIDRYEIDVAGQLTRYIDPAQKTLQFRYDPS 821 Query: 111 RLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFP 170 + D ++ ++ L+++ E + L + Q + G + Sbjct: 822 GRLVERTDAMGYSVKFRYDAYGRLLQLTNENDESYRFGWDELDRLVAQKDLDGSGRLYAY 881 Query: 171 PVLVQMLDR------LESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLY 224 VL +++ E L+D + + Sbjct: 882 NVLDEVIRLTHVPSPDEQPPLSDNAPPTRTTAIRHDFERDAIGRLVSKRTEDGTTDYRYD 941 Query: 225 HCDHRGLPLALVSTEGATEW-CAEYDEWGNLLNEENPHQLQQLIRL 269 D+ +G + YD G LL+E N L Q R Sbjct: 942 AADNLLSITF-TDNKGEKQQLDYTYDANGQLLSETNSAGLLQ-YRY 985 Score = 76.0 bits (185), Expect = 3e-12, Method: Composition-based stats. Identities = 34/189 (17%), Positives = 57/189 (30%), Gaps = 25/189 (13%) Query: 9 RDAHYLYRYDRHGRLTEKTDLIPEGV-------------IRTDDERTHRYHYDSQHRLVH 55 + + Y YD GRL E D + + RT +Y YDS L+ Sbjct: 641 QGGEWRYSYDDIGRLIETRDPLGRSEHIKYLRHWALPIQVTDTAGRTRQYGYDSHGNLL- 699 Query: 56 YTRTQYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSR-------KPQVTWYGWD 108 Q E++Y YDP GR + W + + T Y +D Sbjct: 700 ---WQQDPLGRETQYQYDPEGRVTQVTDALEKSKYLSWNTCGQLLSYRDCSNAQTLYHYD 756 Query: 109 GDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVV 168 + T ++ + L+ E G + + + L + ++ Sbjct: 757 AHGRLRESINARGEHTHFRYDARGYLVESERPDGRIDRYEIDVAGQ-LTRYIDPAQKTLQ 815 Query: 169 FPPVLVQML 177 F L Sbjct: 816 FRYDPSGRL 824 Score = 73.7 bits (179), Expect = 1e-11, Method: Composition-based stats. Identities = 41/260 (15%), Positives = 69/260 (26%), Gaps = 26/260 (10%) Query: 18 DRHGRL-TEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYLYDPLG 76 D G + RY YD RL+ DPLG Sbjct: 619 DPQGNCWLAEVIAGQLIKRIDPQGGEWRYSYDDIGRLIETR---------------DPLG 663 Query: 77 RRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQPGSFTPLIR 136 R ++ + + YG+D Q D +T YQ + + Sbjct: 664 R--SEHIKYLRHWALPIQVTDTAGRTRQYGYDSHGNLLWQQDPLGRETQYQYDPEGRVTQ 721 Query: 137 VETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLES-------EILADRV 189 V A + + L + ++ ++ + + + A Sbjct: 722 VTDALEKSKYLSWNTCGQLLSYRDCSNAQTLYHYDAHGRLRESINARGEHTHFRYDARGY 781 Query: 190 SEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWCAEYD 249 ES R + Q+ PA+K + D G + G + YD Sbjct: 782 LVESERPDGRIDRYEIDVAGQLTRYIDPAQKTLQFRYDPSGRLVERTDAMGYSV-KFRYD 840 Query: 250 EWGNLLNEENPHQLQQLIRL 269 +G LL N + Sbjct: 841 AYGRLLQLTNENDESYRFGW 860 Score = 69.1 bits (167), Expect = 4e-10, Method: Composition-based stats. Identities = 54/282 (19%), Positives = 85/282 (30%), Gaps = 43/282 (15%) Query: 3 PDNRIA-----RDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYT 57 R+ R H +RYD G L E D R RY D +L Y Sbjct: 757 AHGRLRESINARGEHTHFRYDARGYLVE---------SERPDGRIDRYEIDVAGQLTRYI 807 Query: 58 RTQYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSR-------KPQVTWYGWDG- 109 ++ YDP GR V + + + R + +GWD Sbjct: 808 DPA----QKTLQFRYDPSGRLVERTDAMGYSVKFRYDAYGRLLQLTNENDESYRFGWDEL 863 Query: 110 DRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVF 169 DRL ++ + +Y +IR+ + L + + + Sbjct: 864 DRLVAQKDLDGSGR-LYAYNVLDEVIRLTHVPSPDEQPP-------LSDNAPPTRTTAIR 915 Query: 170 PPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHR 229 + RL S+ D ++ R+ A+ L + Y D Sbjct: 916 HDFERDAIGRLVSKRTEDGTTD--YRYDAADNLLSITFTDNKGEKQQLD-----YTYDAN 968 Query: 230 GLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRLPG 271 G L+ ++ G YDE GNL P Q + G Sbjct: 969 GQLLSETNSAGLL--QYRYDELGNLQTLVLPDQRELNHLYYG 1008 Score = 64.4 bits (155), Expect = 8e-09, Method: Composition-based stats. Identities = 31/199 (15%), Positives = 63/199 (31%), Gaps = 28/199 (14%) Query: 12 HYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYL 71 + + D GRL K T Y YD+ L+ T T + Y Sbjct: 915 RHDFERDAIGRLVSKRTEDG----------TTDYRYDAADNLLSITFTDNKGEKQQLDYT 964 Query: 72 YDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQPGSF 131 YD G+ +++ Y G+ T + D+ + +Y Sbjct: 965 YDANGQLLSETNSAGLLQY-------------RYDELGNLQTLVLPDQRELNHLYY--GS 1009 Query: 132 TPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRV-- 189 L ++ ++ +R ++ D + ++ G+ + + V Sbjct: 1010 GHLHQINLNGRVISDFERDAVHDEVLRTQGKLVTRTRYDTSGRLAGKAIHYRDAPAEVLP 1069 Query: 190 -SEESRRWLASCGLTVEQM 207 +++ R+ AS L E + Sbjct: 1070 LLDKAYRYDASDNLIAEVL 1088 Score = 61.0 bits (146), Expect = 9e-08, Method: Composition-based stats. Identities = 47/325 (14%), Positives = 81/325 (24%), Gaps = 46/325 (14%) Query: 8 ARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVE 67 D YRYD L T +G + D Y YD+ +L+ T Sbjct: 931 TEDGTTDYRYDAADNLLSITFTDNKGEKQQLD-----YTYDANGQLLSET-----NSAGL 980 Query: 68 SRYLYDPLGRRVA-----KRVWRRERDLTGWMSLSRKPQV--TWYGWDGDRLTTIQNDRT 120 +Y YD LG +R +G + + + D + + Sbjct: 981 LQYRYDELGNLQTLVLPDQRELNHLYYGSGHLHQINLNGRVISDFERDA-VHDEVLRTQG 1039 Query: 121 RIQTIYQPGSFTPLI-RVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDR 179 ++ T + + L + A+ + V+ M + Sbjct: 1040 KLVTRTRYDTSGRLAGKAIHYRDAPAEVLPLLDKAYRYDASDNLIAEVLTQTQRRGMSNA 1099 Query: 180 LESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLA--LVS 237 E L G T + + +H + + + Sbjct: 1100 ANDENANLEQIIGRFLDLPHTGKTYSGHNRYGYDLNEQLQTVHQSRPNWQATQVEDFKYD 1159 Query: 238 TEGATEW-------------------CAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEES 278 G YD +G L + Q +Q Sbjct: 1160 KAGNLFDGPKLNGLIKHNRVLVYQDKRYRYDRFGRLCEKRIGSNWVQYFEYDAEQRLVCV 1219 Query: 279 GLYYNRHRY-----YDPLQGRYITQ 298 Y + R YDP GR I++ Sbjct: 1220 EQYRSGERERVVFAYDP-LGRRISK 1243 Score = 46.7 bits (109), Expect = 0.002, Method: Composition-based stats. Identities = 76/457 (16%), Positives = 126/457 (27%), Gaps = 60/457 (13%) Query: 47 YDSQHRLVHYTRTQYAEPLVESRYLYDPLG--RRVAKRVWRRERDLTGWMSLSRKPQVTW 104 YD Q RL +Y + +V+ Y R + T + S Sbjct: 436 YDEQGRL-KALYDKYGQTVVQLHYA--ARHPQRVSEVSRVFLKNGGTPTVERSELLVSYR 492 Query: 105 YGWDGDRLTTI--QNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGE 162 Y +G +L + D+ + Y P + ++ + + R ++ +T Sbjct: 493 YTDNG-QLHEVLDATDQRVRRFTYTPEGYLNSHQLASGAVREYEWARFAIPETRPTPKRL 551 Query: 163 DGGSVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIH 222 DG PP+L D I E R+ + + + + R+ H Sbjct: 552 DGTPYRLPPLLEPQPDHEWRVIRHWGSDGEEYRFEYNLEAGETLVTDNL------GRRDH 605 Query: 223 LY---------HCDHRGLPLALVSTEGATE---------WCAEYDEWGNLLNEENPHQLQ 264 Y H D +G G W YD+ G L+ +P Sbjct: 606 YYWGPLYEVYKHIDPQGNCWLAEVIAGQLIKRIDPQGGEWRYSYDDIGRLIETRDPLGRS 665 Query: 265 QLIRLPGQQYDEESGLYYNRHR---Y-YDPLQGRYITQDPIGLKGGWNFYQYPLNPVQYI 320 + I+ + R Y YD QDP+G + YQY Sbjct: 666 EHIKYLRHWALP-IQVTDTAGRTRQYGYDSHGNLLWQQDPLGRETQ---YQY-------- 713 Query: 321 DSMGL---------ASKYGHLNNGGYGARPNKPPTPDPSKLPDIAKQLRLPYPIDQASS- 370 D G SKY N G D +LR + Sbjct: 714 DPEGRVTQVTDALEKSKYLSWNTCGQLLSYRDCSNAQTLYHYDAHGRLRESINARGEHTH 773 Query: 371 -APNVFKTFFRALSPYDYTLYCRKWVKPNLTCTPQDDSQYPGMDTKTASDYLPQTNWPTT 429 + + P V LT + + + +T+ Sbjct: 774 FRYDARGYLVESERPDGRIDRYEIDVAGQLTRYIDPAQKTLQFRYDPSGRLVERTDAMGY 833 Query: 430 QLPPGYTCAEPYLFPDINKPDGPATAGIDDLGEILAK 466 + Y L N+ D G D+L ++A+ Sbjct: 834 SVKFRYDAYGR-LLQLTNENDESYRFGWDELDRLVAQ 869 Score = 44.0 bits (102), Expect = 0.013, Method: Composition-based stats. Identities = 48/286 (16%), Positives = 77/286 (26%), Gaps = 41/286 (14%) Query: 17 YDRHGRLTEKTDLIPEGVI------RTDDERTH---------------------RYHYDS 49 YD GRL D + V+ R + Y Y Sbjct: 436 YDEQGRLKALYDKYGQTVVQLHYAARHPQRVSEVSRVFLKNGGTPTVERSELLVSYRYTD 495 Query: 50 QHRLVHYTRTQYAEPLVESRYLYDPLGRRVAKRVWRR---ERDLTGWMSLSRKPQVTWYG 106 +L A R+ Y P G + ++ E + + +P Sbjct: 496 NGQLHEV---LDATDQRVRRFTYTPEGYLNSHQLASGAVREYEWARFAIPETRPTPKRLD 552 Query: 107 WDGDRL--TTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDG 164 RL + I GS R E +L G Sbjct: 553 GTPYRLPPLLEPQPDHEWRVIRHWGSDGEEYRFEYNLEAGETLVTDNLGRRDHYYWGPLY 612 Query: 165 GSVVF-PPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHL 223 P L + + L R+ + W S + ++ DP+ +L Sbjct: 613 EVYKHIDPQGNCWLAEVIAGQLIKRIDPQGGEWRYSYD-DIGRLIETRDPLGRSEHIKYL 671 Query: 224 YHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRL 269 H P+ + T G T YD GNLL +++P + + Sbjct: 672 RHWAL---PIQVTDTAGRTR-QYGYDSHGNLLWQQDPLGRETQYQY 713 >UniRef50_A6G3J9 Rhs family protein-like protein n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6G3J9_9DELT Length = 2400 Score = 172 bits (436), Expect = 2e-41, Method: Composition-based stats. Identities = 62/354 (17%), Positives = 108/354 (30%), Gaps = 29/354 (8%) Query: 9 RDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVES 68 Y ++ G L + D+ + + YD HRL TR + E Sbjct: 1605 PLQDLRYDWNPVGTLAAREDVRG--------GQREDFGYDHLHRL-AITRALKGAKVHER 1655 Query: 69 RYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQP 128 + YD L E + G L+ V + WD L + D ++ Sbjct: 1656 HFAYDSLSNLAYATDVG-EYEYDGLGRLTLAGGV-GHVWDDAGLLLERTDA-EGTASFEY 1712 Query: 129 GSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADR 188 +F + + + + + V+ L ++ Sbjct: 1713 TAFDKPWLITR-GAHELEFDYDADEGRVWRYDSAKEQETVYVGG----LYERDTRPAEGG 1767 Query: 189 VSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWCAEY 248 E R +L + + +++ + ++ H DH G + G + Sbjct: 1768 EELEHRYYLYAADRVIGELRFTVGSDLIVEQQQRTIHDDHLGSVDLVTDEAGHAAQRRSH 1827 Query: 249 DEWGNLLNE---ENPHQLQQL----IRLPGQQYDEESGLYYNRHRYYDPLQGRYITQDPI 301 D WG L + P + + G + + GL + R YDP GR + DP Sbjct: 1828 DAWGKLRDPDDWTTPDEFLEPGEVNRGFTGHEGQLDFGLVNMKGRLYDPKLGRMASADPF 1887 Query: 302 ----GLKGGWNFYQY-PLNPVQYIDSMGLASKYGHLNNGGYGARPNKPPTPDPS 350 G+ GWN + Y NPV D G + P + P+ Sbjct: 1888 VPAPGVTAGWNRFAYVVNNPVSLTDPSGFSPAPSSEPASPASDAPTSADSTSPT 1941 Score = 56.0 bits (133), Expect = 3e-06, Method: Composition-based stats. Identities = 58/346 (16%), Positives = 89/346 (25%), Gaps = 50/346 (14%) Query: 4 DNRIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRY----------HYDSQHRL 53 ++ H + YD GRL+ T + D+ R+ Sbjct: 1291 GGQVPPGQH-AFSYDGAGRLSLHEFPDGSFERWYYSGLTTEHRDAAGERSVTRVDAAGRV 1349 Query: 54 VHYTRTQYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQV-TWYGWDGDRL 112 V TR + + P + V R E + P + D Sbjct: 1350 VERTRAGGTPDAERLCFDHGPFSQVVRVRPDCIEPGEDLLLPPGEAPATVKTFEHDRLGR 1409 Query: 113 TTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPV 172 D +F L V G L + L + + + + Sbjct: 1410 LIASYDAQEGHQDLAWTAFDELASVVDGNGLLTEFGYDELGRLDARMDSDGLSTWTYDEQ 1469 Query: 173 LVQMLD------------------RLESEILADRVSEESRRWLASCGLTVEQMQNQMDPV 214 +L R S + + R + ++ P Sbjct: 1470 TPGLLSASLSATGVSKAISYDAFARPISVVNTIHGEDFVTRMAYDDRDRLARVHYPAAPH 1529 Query: 215 YTPARKIHLYHCDHRGLPLALVSTEGATEWCAE-YDEWGNLLNEENPHQLQQLIRLPGQQ 273 P H Y D G L + G W AE +DE GNL E + L Sbjct: 1530 VAPIGVSHTY-SDE-GALLEVRDQSGEALWTAEAFDEHGNLTRERFANGLVTERG----- 1582 Query: 274 YDEESGLYYNRHRYYDPLQGRYITQDP-IGLKGGWNFYQYPLNPVQ 318 +D +G R T DP +G +Y NPV Sbjct: 1583 WDPLTG-----------KLRRIQTLDPELGPADPLQDLRYDWNPVG 1617 Score = 53.7 bits (127), Expect = 2e-05, Method: Composition-based stats. Identities = 41/242 (16%), Positives = 76/242 (31%), Gaps = 34/242 (14%) Query: 16 RYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAE--PLVESRYLYD 73 YDR GR + + P+G+ R R YDS+ R+ T + P + + YD Sbjct: 1250 DYDRLGRPVREAWVGPDGLQRETRTR-----YDSEGRVHSSTLPSFGGQVPPGQHAFSYD 1304 Query: 74 PLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQPGSFTP 133 GR + +Y LTT D +++ + + Sbjct: 1305 GAGRLSLHEFPDGSF------------ERWYYS----GLTTEHRDAAGERSVTRVDAAGR 1348 Query: 134 LIRVETATGELAKTQR------RSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILAD 187 ++ A G + S ++ E G ++ PP D Sbjct: 1349 VVERTRAGGTPDAERLCFDHGPFSQVVRVRPDCIEPGEDLLLPPG---EAPATVKTFEHD 1405 Query: 188 RVSEESRRWLASCGLTVEQMQ--NQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWC 245 R+ + A G +++ V + + D G A + ++G + W Sbjct: 1406 RLGRLIASYDAQEGHQDLAWTAFDELASVVDGNGLLTEFGYDELGRLDARMDSDGLSTWT 1465 Query: 246 AE 247 + Sbjct: 1466 YD 1467 Score = 41.3 bits (95), Expect = 0.090, Method: Composition-based stats. Identities = 34/255 (13%), Positives = 65/255 (25%), Gaps = 38/255 (14%) Query: 5 NRIARDAHYLYRYDRHGRLTEKTDLIPEGVIR----------TDDERTHRYHYDS-QHRL 53 R+ + +D G L E+TD T + YD+ + R+ Sbjct: 1680 GRLTLAGGVGHVWDDAGLLLERTDAEGTASFEYTAFDKPWLITRGAHELEFDYDADEGRV 1739 Query: 54 VHYTRTQYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLT 113 + YD + V T + + +Y + DR+ Sbjct: 1740 ----------------WRYDSAKEQETVYVGGLYERDTRPAEGGEELEHRYYLYAADRVI 1783 Query: 114 TIQNDRTRIQTIYQ-------PGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDG-G 165 I + + V G A+ + L+ Sbjct: 1784 GELRFTVGSDLIVEQQQRTIHDDHLGSVDLVTDEAGHAAQRRSHDAWGKLRDPDDWTTPD 1843 Query: 166 SVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYH 225 + P + + E ++ V+ + R + G P T Y Sbjct: 1844 EFLEPGEVNRGFTGHEGQLDFGLVNMKGRLYDPKLGRMASADPFVPAPGVTAGWNRFAYV 1903 Query: 226 CDHRGLPLALVSTEG 240 + P++L G Sbjct: 1904 VN---NPVSLTDPSG 1915 >UniRef50_A8T2S3 Peptidase C39, bacteriocin processing n=2 Tax=Vibrio sp. AND4 RepID=A8T2S3_9VIBR Length = 1546 Score = 172 bits (436), Expect = 2e-41, Method: Composition-based stats. Identities = 61/369 (16%), Positives = 123/369 (33%), Gaps = 41/369 (11%) Query: 1 MWPDNRIARDAHYLYRYDRHGRLTEKTDLIPE-------------GVIRTDDERTHRYHY 47 ++ ++ + Y+YD GR+ E L + + T + Sbjct: 1085 LYAGGKL----NTAYKYDDLGRVVEINALGQRFAYHYDYSPLAFSASVVLPNGVTRKTTL 1140 Query: 48 DSQHRLVHYTRTQYAEPLVESRYLYDPLGRRVAKRVW-----------RRERDLTGWMSL 96 + + L L + +Y +D G+ + + +L Sbjct: 1141 NEKGDLSAILYKSKDGTLADYQYRFDEAGQIAEQTGTPAWFLPRQQSNAKYNELNQITEW 1200 Query: 97 SRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQPGSFTPLIRV--ETATGELAKTQRRSLAD 154 + + Y DG+ + + +D + + + LI++ + +T Sbjct: 1201 NGDDKAFVYDKDGNPIKGLLDDG--VPFEAEYDAENRLIKLSFTRGDTKYRETFAYGYDH 1258 Query: 155 TLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPV 214 L Q ++V V++ + A+ + W S + V Sbjct: 1259 MLAQYQLYKNKALVEEKQFVRLGLVELQQRNAEGEVVQEYAWDKSAPGGI-----GGLLV 1313 Query: 215 YTPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQY 274 + I+ Y +H G +++ G +Y +G + E QQ ++ Sbjct: 1314 AKTSSDIYTYVYNHLGHVQKVLNASGQVVESYQYTPYGQV---EGGDFSQQPFGYSTKRS 1370 Query: 275 DEESGLYYNRHRYYDPLQGRYITQDPIGLKGGWNFYQYPL-NPVQYIDSMGLASKYGHLN 333 D SGL Y +R+Y P Q R++ +DP+ +GG N Y Y +P+ Y+D G + Sbjct: 1371 DFASGLVYFGYRFYSPYQRRWLNRDPLQEQGGINLYAYVNGDPLGYVDPDGRNPILIGIG 1430 Query: 334 NGGYGARPN 342 G Sbjct: 1431 VGAINGAIG 1439 Score = 67.9 bits (164), Expect = 8e-10, Method: Composition-based stats. Identities = 39/244 (15%), Positives = 73/244 (29%), Gaps = 30/244 (12%) Query: 2 WPDNRIAR-----DAHYLYRYDRHGRLTEKTDLIPEGVIRTDDE------------RTHR 44 + DN++ Y + +G+L + D + + Sbjct: 740 YSDNKLKSATDPFGQKSEYSWTNNGQLLKSIDSLGRSTQFIYANNGLDLTSIVGPFGDEQ 799 Query: 45 YHYDSQHRLVHYTRTQYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVT- 103 + YD HR+ YT + +RY YD G ++ + R V Sbjct: 800 FTYDDHHRVTEYTDMDG----LTTRYGYDSTGNLISTTDANGVISTFERDAKGRVTSVRV 855 Query: 104 ------WYGWDGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQ 157 YG+D D +T ++ L ++ A G + Q S L+ Sbjct: 856 GSEIVRRYGYDEIGRVISNKDAADYETHFEYNKINTLTKIRNAAGRTIQRQFGSCPRVLE 915 Query: 158 QSGGEDGGSVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTP 217 + + + L + + A + R +Q QNQ YT Sbjct: 916 KETLPGDRDYQYRYDAQKQLTEVINP--AKGSIQIGRSKAGLVTSFTDQNQNQTSFEYTS 973 Query: 218 ARKI 221 + ++ Sbjct: 974 SGEL 977 Score = 63.7 bits (153), Expect = 2e-08, Method: Composition-based stats. Identities = 49/321 (15%), Positives = 85/321 (26%), Gaps = 65/321 (20%) Query: 4 DNRIARDAH-----YLYRYDRHGRLTEKTDLIPE------------GVIRTDDERTHRYH 46 +R+ Y YD G L TD +R E RY Sbjct: 805 HHRVTEYTDMDGLTTRYGYDSTGNLISTTDANGVISTFERDAKGRVTSVRVGSEIVRRYG 864 Query: 47 YDSQHRLVHYTRTQYAEPLVESRYLYD----------PLGRRVAKRVWRRERDLTGWMSL 96 YD R++ E+ + Y+ GR + ++ R L Sbjct: 865 YDEIGRVIS----NKDAADYETHFEYNKINTLTKIRNAAGRTIQRQFGSCPRVLEKETLP 920 Query: 97 SRKPQVTWYGWDGD-------------------RLTTIQNDRTRIQTIYQPGSFTPLIRV 137 + Y L T D+ + QT ++ S L + Sbjct: 921 GDRDYQYRYDAQKQLTEVINPAKGSIQIGRSKAGLVTSFTDQNQNQTSFEYTSSGELSKK 980 Query: 138 ETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLES-------EILADRVS 190 G K + +++ G + Q LD++E E + + Sbjct: 981 VYPDGSSLKYEYN--KGRIKKVTNARGITKTLHFNKKQQLDKIEYSDQTPSVEYSYNELG 1038 Query: 191 EESRRWLASCGLTVEQMQNQ--MDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWCAEY 248 S A + +N + H ++ L L G +Y Sbjct: 1039 LLSEVKDAIGSTRYQYEKNGRLAEIDGPRDNDTITLHYNNLDLLSELY-AGGKLNTAYKY 1097 Query: 249 DEWGNLLNEENPHQLQQLIRL 269 D+ G ++ + L Q Sbjct: 1098 DDLGRVVE---INALGQRFAY 1115 Score = 42.5 bits (98), Expect = 0.038, Method: Composition-based stats. Identities = 35/263 (13%), Positives = 66/263 (25%), Gaps = 46/263 (17%) Query: 19 RHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYLYDPLGRR 78 +GR E ++ I D + Y Y S ++L T +S Y + G+ Sbjct: 717 PNGRRGEISE------ITYPDGASFEYKYYSDNKLKSATDPFG----QKSEYSWTNNGQL 766 Query: 79 VAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQPGSFTPLIRVE 138 + S+ + T + + + L + + Sbjct: 767 LK--------------SIDSLGRSTQFIYANNGLDLTSIVGPFGDEQFTYDDHHRVTEYT 812 Query: 139 TATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSEESRRWLA 198 G + S + + + S D SE RR+ Sbjct: 813 DMDGLTTRYGYDSTGNLISTTDANGVISTFER-------DAKGRVTSVRVGSEIVRRYGY 865 Query: 199 SCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGN----L 254 V ++ D + + + + G T +G+ L Sbjct: 866 DEIGRVISNKDAADYE-------THFEYNKINTLTKIRNAAGRTIQRQ----FGSCPRVL 914 Query: 255 LNEENPHQLQQLIRLPGQQYDEE 277 E P R Q+ E Sbjct: 915 EKETLPGDRDYQYRYDAQKQLTE 937 >UniRef50_A3NNM1 Protein RhsD n=20 Tax=pseudomallei group RepID=A3NNM1_BURP6 Length = 1539 Score = 171 bits (434), Expect = 4e-41, Method: Composition-based stats. Identities = 74/357 (20%), Positives = 117/357 (32%), Gaps = 44/357 (12%) Query: 6 RIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPL 65 R +DR G + + D + +D +L + A Sbjct: 1111 RDGEYEGCYCAFDRAGNMVHRRDAEQNLAL----------CWDPAGQLRETIALRPATAD 1160 Query: 66 V-------ESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQND 118 V ++Y YD L RR K V S V+ + WDGD L + Sbjct: 1161 VASARKRTRTQYEYDALRRRTRKLVQIESEGEPD----SVFSYVSCFFWDGDALVGERTT 1216 Query: 119 RTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLD 178 + R E + S A + + V Sbjct: 1217 GGWV---------GRAGRAEEDERDATSLAPPSPAGSKNGNWLTLQPDHVCEWFYYPRTF 1267 Query: 179 RLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVST 238 + + ++ + A + Y D G P+ ++ Sbjct: 1268 HPLGVVHCYAGEKR-------------ELARATVGSPSKADATYFYQSDPNGAPVRMLDV 1314 Query: 239 EGATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEESGLYYNRHRYYDPLQGRYITQ 298 EG W A YD G + + + Q +RL GQ +D E+G+ YNRHRYYD G+++++ Sbjct: 1315 EGNVAWEASYDANGGI-EQFGIQAMPQPLRLQGQYFDAETGMSYNRHRYYDARIGQFVSE 1373 Query: 299 DPIGLKGGWNFYQYPLNPVQYIDSMGLASKYGHLNNGGYGARPNKPPTPDPSKLPDI 355 DPI L GG N Y+Y +N + + D +GL N T D+ Sbjct: 1374 DPIRLSGGENLYRYCVNSISWADPLGLDRVPLFDPNNRLSFNAIWAYTGGLPTPSDV 1430 Score = 86.4 bits (212), Expect = 2e-15, Method: Composition-based stats. Identities = 44/274 (16%), Positives = 73/274 (26%), Gaps = 51/274 (18%) Query: 3 PDNR-----IARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYT 57 D R + Y +D HG L +T T RY YD+ +LV Y+ Sbjct: 647 ADGRPVCITMPTARQLRYEWDEHGHLRSRT---------TSSRAVSRYVYDAYGQLVSYS 697 Query: 58 RTQYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQN 117 ++ A +R+ YD G A T Y D Sbjct: 698 GSRGA----ITRFEYDRDGNLAAVT--------------DALGNRTRYVRDARGRVVWMA 739 Query: 118 DRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQML 177 D +Y+ L R G+ + + + + + Sbjct: 740 DPRGQVGLYEYDGNGNLTRAVLPGGKEIRCEFDDDGNLVHYRDAAGQSTT---------- 789 Query: 178 DRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPA--RKIHLYHCDHRGLPLAL 235 + + RR S G+ + + V + + D G ++ Sbjct: 790 ------LAYSPIGLVERRIAPSGGIVDCRYDTEGQLVGVVNERGEQYALKRDPLGRIVSE 843 Query: 236 VSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRL 269 G W Y G LL +P + Sbjct: 844 SDYWGQ-TWHYRYGGSGELLCSTDPLGRVVEYQY 876 Score = 63.7 bits (153), Expect = 1e-08, Method: Composition-based stats. Identities = 62/435 (14%), Positives = 114/435 (26%), Gaps = 58/435 (13%) Query: 83 VWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATG 142 LT + + Y D +R D ++ + ++ +A G Sbjct: 469 HAGLLTSLTLIDAEGNAHPLVSYEHDRERNLAAAIDAMAHPHHFEYAAGHRMVSHTSARG 528 Query: 143 ELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILA----------DRVSEE 192 + D + + G + +F V R+E+ + + Sbjct: 529 VSFYYSYQQGDDGVWRVDHAWGDNGLFDYRFVYDRARMETRVTNSLGHTSITQMNERGVP 588 Query: 193 SRRWLASCGLTVEQMQNQM--DPVYTPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDE 250 + G+T + Q V A + + D G +A +G+ AEYD Sbjct: 589 VAEIDSLGGVTGYRYDTQGRASAVIDTAGRTTAWEYDAYGSLVAQTLPDGSVV-RAEYDA 647 Query: 251 WGNLLNEENPHQLQQLIRL--PGQQYDEESGLYYNRHRY-YDP------------LQGRY 295 G + P Q G + RY YD R+ Sbjct: 648 DGRPVCITMPTARQLRYEWDEHGHLRSRTTS-SRAVSRYVYDAYGQLVSYSGSRGAITRF 706 Query: 296 ITQDPIGLKGGW-----NFYQYPLNP----VQYIDSMGLASKYGHLNNGGYGARPNKPPT 346 D G N +Y + V D G Y + NG Sbjct: 707 -EYDRDGNLAAVTDALGNRTRYVRDARGRVVWMADPRGQVGLYEYDGNGNLTRAVLPGGK 765 Query: 347 PDPSKLPDIAKQLRLPYPIDQASSAPNVFKTFFRA----LSPYDYTLYCRKWVKPNLTCT 402 + D L + D A + + + ++P + CR + L Sbjct: 766 EIRCEFDDDGN---LVHYRDAAGQSTTLAYSPIGLVERRIAPSGGIVDCRYDTEGQLVGV 822 Query: 403 PQDDSQYPGMDTKTASDYLPQTNWPTTQLPPGYTCAEPYLFPDINKPDGPATAGIDDLGE 462 + + + + ++++ Y G D LG Sbjct: 823 VNERGEQYALKRDPLGRIVSESDYWGQTWHYRY------------GGSGELLCSTDPLGR 870 Query: 463 ILAKMKQRTSRGIRK 477 ++ R R + K Sbjct: 871 VVEYQYDRCGRIVEK 885 Score = 63.3 bits (152), Expect = 2e-08, Method: Composition-based stats. Identities = 41/302 (13%), Positives = 78/302 (25%), Gaps = 39/302 (12%) Query: 13 YLYRYDRHGRLTEKTDLIPEG------------VIRTDDERTHRYHY----DSQHRLVHY 56 Y +DR L D + + + Y Y D R Sbjct: 489 VSYEHDRERNLAAAIDAMAHPHHFEYAAGHRMVSHTSARGVSFYYSYQQGDDGVWR---V 545 Query: 57 TRTQYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMS-------LSRKPQVTWYGWDG 109 L + R++YD +T + VT Y +D Sbjct: 546 DHAWGDNGLFDYRFVYDRARMETRVTNSLGHTSITQMNERGVPVAEIDSLGGVTGYRYDT 605 Query: 110 DRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVF 169 + D T ++ ++ L+ G + + + + + + Sbjct: 606 QGRASAVIDTAGRTTAWEYDAYGSLVAQTLPDGSVVRAEYDADGRPVCITMPTARQLRYE 665 Query: 170 PPVLVQMLDRL-----ESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPA--RKIH 222 + R S + D + + +T + + Sbjct: 666 WDEHGHLRSRTTSSRAVSRYVYDAYGQLVSYSGSRGAITRFEYDRDGNLAAVTDALGNRT 725 Query: 223 LYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEESGLYY 282 Y D RG + + G EYD GNL P + ++D++ L + Sbjct: 726 RYVRDARGRVVWMADPRGQ-VGLYEYDGNGNLTRAVLPGGKEIRC-----EFDDDGNLVH 779 Query: 283 NR 284 R Sbjct: 780 YR 781 Score = 59.1 bits (141), Expect = 4e-07, Method: Composition-based stats. Identities = 39/264 (14%), Positives = 79/264 (29%), Gaps = 32/264 (12%) Query: 9 RDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVES 68 R Y + D GR+ ++D +T Y Y L+ T Sbjct: 826 RGEQYALKRDPLGRIVSESDYW---------GQTWHYRYGGSGELLCSTDPLG----RVV 872 Query: 69 RYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWD--GDRLTTIQNDRTRIQTIY 126 Y YD GR V K D QV + +D G+ + +D + + Sbjct: 873 EYQYDRCGRIVEKLARASADDAFV--------QVHRFAYDQCGNLILAENDDS---RVEF 921 Query: 127 QPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILA 186 + +I + + + +++ ++ L++ + E ++L Sbjct: 922 CHDADGRVIEEKQGDDFTINNVFDAAGNRIERR-----TRLLSEGALIEHVVHYEYDVLN 976 Query: 187 DRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGAT-EWC 245 VS A + Q + + R+ Y + L ++ G Sbjct: 977 AVVSIRIDGSAAVVIERDDLGQAVSEGLGPALRRAFSYEAGGQLAVQTLFASTGTMFASE 1036 Query: 246 AEYDEWGNLLNEENPHQLQQLIRL 269 YD G ++ + + + Sbjct: 1037 YAYDPNGEVIEKRDERGRMERFEY 1060 Score = 54.4 bits (129), Expect = 8e-06, Method: Composition-based stats. Identities = 47/322 (14%), Positives = 84/322 (26%), Gaps = 68/322 (21%) Query: 9 RDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHR------------YHYDSQHRLVHY 56 R A + YDR G L TD + D R Y YD L Sbjct: 700 RGAITRFEYDRDGNLAAVTDALGNRTRYVRDARGRVVWMADPRGQVGLYEYDGNGNLTRA 759 Query: 57 TRTQYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWM---------SLSRKPQVTWYGW 107 E R +D G V R + + + S Y Sbjct: 760 VLP----GGKEIRCEFDDDGNLVHYRDAAGQSTTLAYSPIGLVERRIAPSGGIVDCRYDT 815 Query: 108 DGDRLTTIQNDRT--------------------RIQTIYQPGSFTPLIRVETATGELAKT 147 +G +L + N+R Y+ G L+ G + + Sbjct: 816 EG-QLVGVVNERGEQYALKRDPLGRIVSESDYWGQTWHYRYGGSGELLCSTDPLGRVVEY 874 Query: 148 QRRSLAD---TLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRV--------------- 189 Q L ++ +D V Q + + +E RV Sbjct: 875 QYDRCGRIVEKLARASADDAFVQVHRFAYDQCGNLILAENDDSRVEFCHDADGRVIEEKQ 934 Query: 190 -SEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLAL-VSTEGATEWCAE 247 + + + + + ++ + Y D +++ + A E Sbjct: 935 GDDFTINNVFDAAGNRIERRTRLLSEGALIEHVVHYEYDVLNAVVSIRIDGSAAVV--IE 992 Query: 248 YDEWGNLLNEENPHQLQQLIRL 269 D+ G ++E L++ Sbjct: 993 RDDLGQAVSEGLGPALRRAFSY 1014 Score = 45.6 bits (106), Expect = 0.004, Method: Composition-based stats. Identities = 28/252 (11%), Positives = 66/252 (26%), Gaps = 53/252 (21%) Query: 10 DAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESR 69 + + YD+ G L + +D+ + +D+ R++ + Sbjct: 896 VQVHRFAYDQCGNLI----------LAENDDSRVEFCHDADGRVIEEKQGDDFTINNV-- 943 Query: 70 YLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQPG 129 +D G R+ +R RL + Y+ Sbjct: 944 --FDAAGNRIERRT---------------------------RLLSE-GALIEHVVHYEYD 973 Query: 130 SFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRV 189 ++ + +R L + + G Q+ + A Sbjct: 974 VLNAVVSIRIDGSAAVVIERDDLGQAVSEGLGPALRRAFSYEAGGQL---AVQTLFASTG 1030 Query: 190 SEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWCAEYD 249 + + + V + +++ + + D G ++ + G YD Sbjct: 1031 TMFASEYAYDPNGEVIEKRDERGRMER-------FEYDSVGRVVSHLGARG-IVRRLAYD 1082 Query: 250 EWGNLLNEENPH 261 G+LL Sbjct: 1083 LAGDLLRTRVSG 1094 >UniRef50_B9B9U8 YD repeat protein n=1 Tax=Burkholderia multivorans CGD1 RepID=B9B9U8_9BURK Length = 345 Score = 171 bits (434), Expect = 4e-41, Method: Composition-based stats. Identities = 87/322 (27%), Positives = 118/322 (36%), Gaps = 48/322 (14%) Query: 22 RLTEKTDLIPEGVIRT-DDERTHRYHYDSQHRLVHYT--RTQYAEPLVESRYLYDPLGRR 78 R T D + +R + R HYD R++ T R+ PLVE RY YD G+ Sbjct: 8 RRTGSGDDLHRETVRMLSSKVGQRTHYDPAGRVLQQTIQRSSSPAPLVERRYRYDAAGQL 67 Query: 79 VAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQPGSFTPLIRVE 138 R+ Y G RL + + + + P S Sbjct: 68 SRIEDSRKGGID------------YRYDPVG-RLIEAISRVAKERFAFDPAS-------- 106 Query: 139 TATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSEESRRWLA 198 ++ D ++ S P + V E+ W + Sbjct: 107 ------------NIVDPVRSSDTPASRPRPVRPESTLPAE------AGPVVGIETPEWKS 148 Query: 199 SCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEGATEWCAEYDEWGNLLNEE 258 S + Q P K+ YHCD G P L +G W A Y WG Sbjct: 149 SDRYVPQDDPLQKVPQRRADAKLFYYHCDQIGTPQLLTDDDGDVVWEASYKAWGEAREVI 208 Query: 259 NPHQ------LQQLIRLPGQQYDEESGLYYNRHRYYDPLQGRYITQDPIGLKGGWNFYQY 312 + +R GQQ DEE+GL+YNR+RYYDP GR+ + DPI L GG N YQY Sbjct: 209 ARASKAAGIVARNSLRFQGQQEDEETGLHYNRYRYYDPTSGRFTSADPIRLAGGSNVYQY 268 Query: 313 PLNPVQYIDSMGLASKYGHLNN 334 LN V +ID G +S N Sbjct: 269 ALNLVSWIDPFGFSSTTDGTGN 290 >UniRef50_UPI0001744BEA hypothetical protein VspiD_17785 n=1 Tax=Verrucomicrobium spinosum DSM 4136 RepID=UPI0001744BEA Length = 3199 Score = 171 bits (433), Expect = 4e-41, Method: Composition-based stats. Identities = 69/341 (20%), Positives = 107/341 (31%), Gaps = 33/341 (9%) Query: 5 NRIARDAHYL------YR----YDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLV 54 NR + Y +D G + + +++ P G+ RT YD +RLV Sbjct: 2622 NRATQIQGLTVTSGLLYTQTIKHDLVGNVVQVSEVYPSGL----ANRTVVNTYDDVYRLV 2677 Query: 55 HYTRTQYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQ---------VTWY 105 + + T V + Y YD R + + T + + Q T Y Sbjct: 2678 NESTTTTGSGTVTTAYSYDTANNRSLRVITGGSTPGTTSYAYNAANQLTSSTTGADTTVY 2737 Query: 106 GWDGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGG 165 +D + + Y L+RV + T + E G Sbjct: 2738 TYDLNGNRRTREFAGEDDAEYDYDYENRLVRVYDPRANDREFLHAYDYRTRRVEVVEIDG 2797 Query: 166 SVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYH 225 +V E +S E R G + + V + H Sbjct: 2798 PTTKTRKVVFSGGLAVQEFEDAVLSVEYLRGNGMGGGVGGMLYSLRASVPS------YSH 2851 Query: 226 CDHRGLPLALVSTEGATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEESGLYYNRH 285 + RG +A GA + A Y+ +G E +Q + D + L Sbjct: 2852 NNVRGDIIAKTDEGGALTYQASYEAFGTRTVEAGSTLDRQKA--NSKDEDP-TRLLNEGF 2908 Query: 286 RYYDPLQGRYITQDPIGLKGGWNFYQYPL-NPVQYIDSMGL 325 RY D G ++T+DP G G N Y Y NP D GL Sbjct: 2909 RYRDLETGTFLTKDPAGFVDGPNLYAYVRQNPWTSFDPEGL 2949 Score = 87.2 bits (214), Expect = 1e-15, Method: Composition-based stats. Identities = 51/311 (16%), Positives = 82/311 (26%), Gaps = 65/311 (20%) Query: 4 DNRIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAE 63 DNR+ Y YD G L T+ + Y YD+ +R T Sbjct: 2505 DNRV-------YGYDAVGNLLTVTEAG------KGGKADVAYTYDALNRPQSET-----S 2546 Query: 64 PLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDG-DRLTTIQNDRTRI 122 V +Y YD G R R++ +D +RL T+ + Sbjct: 2547 GGVTHQYRYDLAGNRTLVTYGGTGREIVS-------------TYDSLNRLATMTENGRTT 2593 Query: 123 QTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLES 182 Y + + G+ T +L Q G +++ + L Sbjct: 2594 S--YAYNASGAVSIRTLPNGDATTTLYDALNRATQIQGLTVTSGLLYTQTIKHDLVGNVV 2651 Query: 183 EILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHR------------- 229 ++ S + R + + V ++ N+ Y D Sbjct: 2652 QVSEVYPSGLANRTVVNTYDDVYRLVNESTTTTGSGTVTTAYSYDTANNRSLRVITGGST 2711 Query: 230 -GLPLALVSTEGATEWC--------AEYDEWGNLLNEENPHQLQQLIRLPGQQYDEESGL 280 G + YD GN E + D E+ L Sbjct: 2712 PGTTSYAYNAANQLTSSTTGADTTVYTYDLNGNRRTREFAGEDDAEYDY-----DYENRL 2766 Query: 281 YYNRHRYYDPL 291 R YDP Sbjct: 2767 V----RVYDPR 2773 Score = 67.9 bits (164), Expect = 9e-10, Method: Composition-based stats. Identities = 35/263 (13%), Positives = 57/263 (21%), Gaps = 41/263 (15%) Query: 16 RYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVES-----RY 70 YD G + TD YD +R+ T +P + Sbjct: 2332 GYDAVGNVVAVTDARGFTTDT---------VYDEANRVHTVTAPLVIKPDGTTARPVVTT 2382 Query: 71 LYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQPGS 130 YD G +VT +D D + + Sbjct: 2383 TYDKNGNVRTVTDPNG--------------KVTTNTYDALNRLHTTTDAEGMVVTNEYDK 2428 Query: 131 FTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQ--MLDRLESEILADR 188 V + + + L+ + +V L + +D Sbjct: 2429 VGNRTAVIDGKNQRTEFEYDGLSRNTVVRDALNRETVFEYNDLNKAARVDAEGQRTEYGY 2488 Query: 189 VSEESRRWLASCGLTVEQMQNQMDPVYT---------PARKIHLYHCDHRGLPLALVSTE 239 + + G TV+ D V + Y D P + Sbjct: 2489 DDRHRLQTVTYIGRTVDNRVYGYDAVGNLLTVTEAGKGGKADVAYTYDALNRPQSET--S 2546 Query: 240 GATEWCAEYDEWGNLLNEENPHQ 262 G YD GN Sbjct: 2547 GGVTHQYRYDLAGNRTLVTYGGT 2569 Score = 66.8 bits (161), Expect = 2e-09, Method: Composition-based stats. Identities = 37/271 (13%), Positives = 67/271 (24%), Gaps = 38/271 (14%) Query: 16 RYDRHGRLTEKTDL------------IPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAE 63 YD+ G T D V+R R + Y+ + + Sbjct: 2425 EYDKVGNRTAVIDGKNQRTEFEYDGLSRNTVVRDALNRETVFEYNDLN-----KAARVDA 2479 Query: 64 PLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLT-TIQNDRTRI 122 + Y YD R ++ + +V Y G+ LT T + Sbjct: 2480 EGQRTEYGYDDRHRL----------QTVTYIGRTVDNRVYGYDAVGNLLTVTEAGKGGKA 2529 Query: 123 QTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQML----- 177 Y + + ET+ G + + + + G G +V + L Sbjct: 2530 DVAYTYDALNRP-QSETSGGVTHQYRYDLAGNRTLVTYGGTGREIVSTYDSLNRLATMTE 2588 Query: 178 DRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVS 237 + + + S R L + T + Sbjct: 2589 NGRTTSYAYNASGAVSIRTLPNGDATTTLYDALNRATQIQGLTVT---SGLLYTQTIKHD 2645 Query: 238 TEGATEWCAEYDEWGNLLNEENPHQLQQLIR 268 G +E G L N + + R Sbjct: 2646 LVGNVVQVSEVYPSG-LANRTVVNTYDDVYR 2675 Score = 63.3 bits (152), Expect = 2e-08, Method: Composition-based stats. Identities = 41/299 (13%), Positives = 83/299 (27%), Gaps = 60/299 (20%) Query: 2 WPDNRIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQY 61 +P A + YD G TE+TD ++ R ++ YD+ +R + Sbjct: 2033 YPGG-----ADKEFEYDLRGNKTEETD---------ENNRLTKWTYDALNR-IDTETRVM 2077 Query: 62 AEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTR 121 P + + ++ +G + S + T Y +DG + + Sbjct: 2078 DGPDLVTTKTWNAVG--------------SCESSTDPEGNTTSYVYDGLQRLKEIHAPLS 2123 Query: 122 IQTIYQPGSFT----------PLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPP 171 T+YQ G+ + R E G ++ +L + G + Sbjct: 2124 QVTVYQYGANSGGGVFATTPFKPTRTEDPRGYVSGVTYDALYRPTETRVQYGGAGIFATT 2183 Query: 172 VLVQMLDRLESEILADRVSEESRRWLA-SCGLTVEQMQNQMDPVYTPARKIHLYHCDHRG 230 + + + + A + V + ++ + D G Sbjct: 2184 ITDYDDVGNVTAVTDSLNKTTHTAYDALNRPKQVTFADSTTQKMFYTGTGLKWKVEDELG 2243 Query: 231 L-PLALVSTEG-------------------ATEWCAEYDEWGNLLNEENPHQLQQLIRL 269 + G +EYDE GN++ + I Sbjct: 2244 RQTVTEFDGAGRPVKVTQPSVLDAISGENRNPVIRSEYDEAGNVVAAVTALGQRTDIGY 2302 Score = 49.8 bits (117), Expect = 2e-04, Method: Composition-based stats. Identities = 30/239 (12%), Positives = 63/239 (26%), Gaps = 38/239 (15%) Query: 14 LYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYT-RTQYAEPLVESRYLY 72 + YD + ++ R RY D R + ++ + Y Sbjct: 1894 RFEYDP---------RRIMTKVTDEEGRESRYLTDHLGRRTRESIYGSNGALAQQTDFEY 1944 Query: 73 DPLGR------------RVAKRVWRRERDLTGWMSLSRKPQV-------------TWYGW 107 G R A DL +V T Y + Sbjct: 1945 ---GNSIFPGFVTKRIVRSASGDPGWASDLITRFIPDSAGRVASEVVEMDGPDLVTVYEY 2001 Query: 108 DGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSV 167 + D T ++ L +V G + + + +++ + + Sbjct: 2002 ASNGNKVSATDPRGKTTYFEYDRRNRLKKVTYPGGADKEFEYDLRGNKTEETDENNRLTK 2061 Query: 168 VFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHC 226 L ++ D V+ ++ + SC + + N VY +++ H Sbjct: 2062 WTYDALNRIDTETRVMDGPDLVTTKTWNAVGSCESSTDPEGNTTSYVYDGLQRLKEIHA 2120 Score = 43.6 bits (101), Expect = 0.015, Method: Composition-based stats. Identities = 33/250 (13%), Positives = 62/250 (24%), Gaps = 25/250 (10%) Query: 16 RYDRHGRLTEKTDLI-PEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYLYDP 74 +D GR + T + + + R YD +V + YD Sbjct: 2249 EFDGAGRPVKVTQPSVLDAISGENRNPVIRSEYDEAGNVVAAVTALG----QRTDIGYDS 2304 Query: 75 LGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQPGSFTP- 133 R+V ++ + E R T Y G+ + T+Y + Sbjct: 2305 RNRKVWEQ--QPEVWDAENAVFMRPTTSTGYDAVGNVVAVTDARGFTTDTVYDEANRVHT 2362 Query: 134 -----LIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPV------LVQMLDRLES 182 +I+ + T T ++ +G + + Sbjct: 2363 VTAPLVIKPDGTTARPVVTTTYDKNGNVRTVTDPNGKVTTNTYDALNRLHTTTDAEGMVV 2422 Query: 183 EILADRVSEESRRWLASCGLT---VEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTE 239 D+V + T + + R+ + D V E Sbjct: 2423 TNEYDKVGNRTAVIDGKNQRTEFEYDGLSRNTVVRDALNRETVFEYNDLNKAAR--VDAE 2480 Query: 240 GATEWCAEYD 249 G YD Sbjct: 2481 GQRT-EYGYD 2489 Database: uniref50.fasta Posted date: Mar 8, 2010 10:38 AM Number of letters in database: 1,040,396,356 Number of sequences in database: 3,077,464 Lambda K H 0.308 0.122 0.369 Lambda K H 0.267 0.0375 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 2,701,897,653 Number of Sequences: 3077464 Number of extensions: 119387228 Number of successful extensions: 399262 Number of sequences better than 1.0e-01: 250 Number of HSP's better than 0.1 without gapping: 1998 Number of HSP's successfully gapped in prelim test: 1145 Number of HSP's that attempted gapping in prelim test: 331885 Number of HSP's gapped (non-prelim): 18974 length of query: 477 length of database: 1,040,396,356 effective HSP length: 133 effective length of query: 344 effective length of database: 631,093,644 effective search space: 217096213536 effective search space used: 217096213536 T: 11 A: 40 X1: 16 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.2 bits) S2: 95 (41.3 bits)