41 c1tf2A_ Probab=100.00  E-value=8.5e-31  Score=204.08  Aligned_columns=397  Identities=17%

Q ss_pred             HHHHHHHCCCCCCCHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHH
Q ss_conf             99999978799778899999999966998999928998478999999999998502103578279998182899999999
Q batch____        15 LLEALQDKGFTRPTAIQAAAIPPALDGRDVLGSAPTGTGKTAAYLLPALQHLLDFPRKKSGPPRILILTPTRELAMQVSD   94 (444)
Q Consensus        15 l~~~l~~~g~~~~~~iQ~~ai~~il~g~~vii~apTGsGKTl~~~lpil~~i~~~~~~~~~~~~~lii~Pt~~L~~Q~~~   94 (444)
                      +.++..+....+|+++|..++..+++|+  |+.+.||+|||+++.+|++       ..+..|..|.|++|++.||.|.++
T Consensus        64 vrEa~~R~~g~rp~~vQ~i~~~~L~~G~--Iaem~TGeGKTL~~~Lpa~-------l~aL~G~~V~IvT~n~yLA~RD~e  134 (772)
T c1tf2A_          64 VREASRRVTGMFPFKVQLMGGVALHDGN--IAEMKTGEGKTLTSTLPVY-------LNALTGKGVHVVTVNEYLASRDAE  134 (772)
T ss_dssp             HHHHHHHHHSCCCCHHHHHHHHHHHTTS--EEECCTTSCHHHHHHHHHH-------HHHTTSSCEEEEESSHHHHHHHHH
T ss_pred             HHHHHHHHCCCCCCHHHHHHHHHHHCCC--EEEECCCCCHHHHHHHHHH-------HHHHCCCCEEEEECCHHHHHHHHH
T ss_conf             9999987508888737999999984898--8999789876899999999-------997179952998269899999999


Q ss_pred             HHHHHHHHCCCCEEEEECCCCHHHHHHHHCCCCCEEEECHHHH-------HHHHHHCCCCHHHCCEEEECCCCCHH----
Q ss_conf             9999730138841999828786899986214672675053676-------43321000014331021101432000----
Q batch____        95 HARELAKHTHLDIATITGGVAYMNHAEVFSENQDIVVATTGRL-------LQYIKEENFDCRAVETLILDEADRML----  163 (444)
Q Consensus        95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~----  163 (444)
                      ++..++...++.+..++++.+.........  ..+.+.|+..+       .............+.+.++||.+...    
T Consensus       135 ~~~~l~~~LGL~v~~i~~~~~~~~r~~~y~--~dI~y~T~~~l~fD~Lrd~~~~~~~~lv~r~~~~~IiDEvDsiLiDea  212 (772)
T c1tf2A_         135 QMGKIFEFLGLTVGLNLNSMSKDEKREAYA--ADITYSTNNELGFDYLRDNMVLYKEQMVQRPLHFAVIDEVDSILIDEA  212 (772)
T ss_dssp             HHHHHHHHTTCCEEECCTTCCHHHHHHHTT--SSEEEEEHHHHHHHHHHHTTCSSGGGCCCCCCCEEEEETHHHHHTTST
T ss_pred             HHHHHHHHHCCEEEEEECCCCHHHHHHHCC--CCEEEECHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEHHHHHHHHHCC
T ss_conf             999998673954898508999899998414--996996389988878787531250000136786676011567766304


Q ss_pred             ------------CCCCHHHHHHHHHHCCCC--------------------------------------------------
Q ss_conf             ------------136114678998735766--------------------------------------------------
Q batch____       164 ------------DMGFAQDIEHIAGETRWR--------------------------------------------------  181 (444)
Q Consensus       164 ------------~~~~~~~~~~~~~~~~~~--------------------------------------------------  181 (444)
                                  ..........+.......                                                  
T Consensus       213 ~tpliisg~~~~~~~~y~~~~~iv~~L~~~~~~~~d~~~~~v~lt~~g~~~~e~~~~~~~l~~~~~~~~~~~i~~al~A~  292 (772)
T c1tf2A_         213 RTPLIISGQAAKSTKLYVQANAFVRTLKAEKDYTYDIKTKAVQLTEEGMTKAEKAFGIDNLFDVKHVALNHHINQALKAH  292 (772)
T ss_dssp             TCEEEEECSSCCCCHHHHHHHHHHTTCCSSSSEEECSSSCCEEECHHHHHHHHHHTTCSCSSSGGGHHHHHHHHHHHHHH
T ss_pred             CCCCEECCCCCCCHHHHHHHHHHHHHHCCCCCCEECCCCCEEEECHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHH
T ss_conf             56200037775400289999999985013577202014525798767899999761854335722334889999999998


Q ss_pred             ------------------------------------------------------------------CCEEEEECCCCCHH
Q ss_conf             ------------------------------------------------------------------63377631579778
Q batch____       182 ------------------------------------------------------------------KQTLLFSATLEGDA  195 (444)
Q Consensus       182 ------------------------------------------------------------------~~~~~~~~~~~~~~  195 (444)
                                                                                        ...+.-.+.+....
T Consensus       293 ~l~~~d~~YiV~~~~I~ivd~~tgr~~~~r~~~~glhQ~ieake~v~i~~e~~t~asis~q~~f~~Y~kl~GmTGTa~te  372 (772)
T c1tf2A_         293 VAMQKDVDYVVEDGQVVIVDSFTGRLMKGRRYSEGLHQAIEAKEGLEIQNESMTLATITFQNYFRMYEKLAGMTGTAKTE  372 (772)
T ss_dssp             HTCCBTTTEEEETTEEEEBCTTTCCBCTTCCCTTTHHHHHHHHTTCCCCCCCCEEEEEEHHHHHTTSSEEEEEESCCGGG
T ss_pred             HHHCCCCCEEEECCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHH
T ss_conf             86217864285389388831657853456421024789999873784785431122000467875335541456542779


Q ss_pred             HHHHHHHHCCCCEEEEECCCCCCCCCCEEEEEECCHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHCCCCC
Q ss_conf             99999860889339951467875665248999649267755667875214678379971384999999999861102331
Q batch____       196 IQDFAERLLEDPVEVSANPSTRERKKIHQWYYRADDLEHKTALLVHLLKQPEATRSIVFVRKRERVHELANWLREAGINN  275 (444)
Q Consensus       196 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lif~~~~~~~~~~~~~l~~~~~~~  275 (444)
                      ...+...+..+...+ ..............++....................+.++||||.++..++.++..|...++..
T Consensus       373 ~~e~~~~Y~l~vv~I-Pt~k~~~r~~~~d~i~~~~~~K~~aI~~~i~~~~~~grpVLVft~si~~se~ls~~L~~~gi~~  451 (772)
T c1tf2A_         373 EEEFRNIYNMQVVTI-PTNRPVVRDDRPDLIYRTMEGKFKAVAEDVAQRYMTGQPVLVGTVAVETSELISKLLKNKGIPH  451 (772)
T ss_dssp             HHHHHHHHCCCEEEC-CCSSCCCCEECCCEEESSHHHHHHHHHHHHHHHHHHTCCEEEEESSHHHHHHHHHHHHTTTCCC
T ss_pred             HHHHHHHHCCCEEEE-CCCCCHHHCCCCCEEEECHHHHHHHHHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHHCCCCE
T ss_conf             999998719846982-7876110013476164488999999999999986308918999623899999999998669916


Q ss_pred             HHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC---CCCC-----EEEECCCCCCHHHHHHHHHHHCCCCCCEE
Q ss_conf             000256420135778776531000134778889974588---9844-----89981988889998766021003899339
Q batch____       276 CYLEGEMVQGKRNEAIKRLTEGRVNVLVATDVAARGIDI---PDVS-----HVFNFDMPRSGDTYLHRIGRTARAGRKGT  347 (444)
Q Consensus       276 ~~~~~~~~~~~r~~~~~~f~~g~~~ilv~T~~~~~GiDi---p~v~-----~VI~~~~p~~~~~~~qr~GR~gR~g~~g~  347 (444)
                      .++++.....++..+.+.++.|  .|.|||++++||+||   ++|.     +||....|.+.....|..||+||.|.+|.
T Consensus       452 ~vLna~~~~~E~~ii~~Ag~~g--~VtIATnmAGRGtDI~l~~~V~~~GGLhVI~t~~~~s~rid~Ql~GRagRqGdpGs  529 (772)
T c1tf2A_         452 QVLNAKNHEREAQIIEEAGQKG--AVTIATNMAGRGTDIKLGEGVKELGGLAVVGTERHESRRIDNQLRGRSGRQGDPGI  529 (772)
T ss_dssp             EEECSSSHHHHHHHHHTSSSTT--CEEEEETTSSTTCCCCCCTTCGGGTSEEEEESSCCSSHHHHHHHHTTSSCSSCCEE
T ss_pred             EEECCCCCHHHHHHHHHCCCCC--CEEEEHHHHHCCCCCCCCHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCC
T ss_conf             9961675536889998427998--38987013206867635723773198289951488667889886534420578871


Q ss_pred             EEEEECHHH-------HHHHHHHHHHHCCCCCHHHCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             999878879-------9999999999567010000013455530311344212457776666655533322114567642
Q batch____       348 AISLVEAHD-------HLLLGKVGRYIEEPIKARVIDELRPKTRAPSEKQTGKPSKKVLAKRAEKKKAKEKEKPRVKKRH  420 (444)
Q Consensus       348 ~i~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  420 (444)
                      +..|++-+|       ...+..+...+..+-.................+.........-....++...-...........
T Consensus       530 s~~~lsled~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aq~~~e~~~~~~rk~~~~yd~v~~~QR~~iy~~R  609 (772)
T c1tf2A_         530 TQFYLSMEDELMRRFGAERTMAMLDRFGMDDSTPIQSKMVSRAVESSQKRVEGNNFDSRKQLLQYDDVLRQQREVIYKQR  609 (772)
T ss_dssp             EEEEEETTSSGGGSSHHHHHHHHHHHHTCBTTBCBCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             EEEEEEHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
T ss_conf             79997400337754040578989985157788724306889999999999998679998988857653000278899999


Q ss_pred             HHHCC
Q ss_conf             22103
Q batch____       421 RDTKN  425 (444)
Q Consensus       421 ~~~~~  425 (444)
                      +....
T Consensus       610 ~~il~  614 (772)
T c1tf2A_         610 FEVID  614 (772)
T ss_dssp             HHHHT
T ss_pred             HHHHC
T ss_conf             99730