3 c1s2mA_ Probab=100.00  E-value=0  Score=352.27  Aligned_columns=363  Identities=35%

Q ss_pred             CCHHHCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEE
Q ss_conf             67588798889999999787997788999999999669989999289984789999999999985021035782799981
Q batch____         4 TTFSELELDESLLEALQDKGFTRPTAIQAAAIPPALDGRDVLGSAPTGTGKTAAYLLPALQHLLDFPRKKSGPPRILILT   83 (444)
Q Consensus         4 ~~f~~l~l~~~l~~~l~~~g~~~~~~iQ~~ai~~il~g~~vii~apTGsGKTl~~~lpil~~i~~~~~~~~~~~~~lii~   83 (444)
                      +||++|+|++.|+++|+++||++|+|+|++||+++++|+|++++||||||||++|++|+++.+    .....+++++|++
T Consensus         1 ~sf~~l~l~~~i~~~l~~~g~~~~~~~Q~~ai~~il~~~~vii~apTGsGKT~~~~l~~l~~l----~~~~~~~~~iii~   76 (377)
T c1s2mA_           1 NTFEDFYLKRELLMGIFEAGFEKPSPIQEEAIPVAITGRDILARAKNGTGKTAAFVIPTLEKV----KPKLNKIQALIMV   76 (377)
T ss_dssp             CCGGGGCCCHHHHHHHHHTTCCSCCHHHHHHHHHHHHTCCEEEECCTTSCHHHHHHHHHHHHC----CTTSCSCCEEEEC
T ss_pred             CCHHHCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHH----HCCCCCCEEEEEE
T ss_conf             993367998899999997779987989999999997599899992799867899999999998----5046882899984


Q ss_pred             CCHHHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHCCCCCEEEECHHHHHHHHHHCCCCHHHCCEEEECCCCCHH
Q ss_conf             82899999999999973013884199982878689998621467267505367643321000014331021101432000
Q batch____        84 PTRELAMQVSDHARELAKHTHLDIATITGGVAYMNHAEVFSENQDIVVATTGRLLQYIKEENFDCRAVETLILDEADRML  163 (444)
Q Consensus        84 Pt~~L~~Q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  163 (444)
                      |+++|+.|+++.+++++.........++.+.................+.++..+..........+......+.++.+...
T Consensus        77 p~~~l~~q~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~  156 (377)
T c1s2mA_          77 PTRELALQTSQVVRTLGKHCGISCMVTTGGTNLRDDILRLNETVHILVGTPGRVLDLASRKVADLSDCSLFIMDEADKML  156 (377)
T ss_dssp             SSHHHHHHHHHHHHHHTTTTTCCEEEECSSSCHHHHHHHTTSCCSEEEECHHHHHHHHHTTCSCCTTCCEEEEESHHHHS
T ss_pred             CHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHCCCCEEEEEEECCCEEEC
T ss_conf             73898799999999973103771599981787378777520357502320388876432000001100022202202441


Q ss_pred             CCCCHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHCCCCEEEEECCCCCCCCCCEEEEEECCHHHHHHHHHHHHH
Q ss_conf             13611467899873576663377631579778999998608893399514678756652489996492677556678752
Q batch____       164 DMGFAQDIEHIAGETRWRKQTLLFSATLEGDAIQDFAERLLEDPVEVSANPSTRERKKIHQWYYRADDLEHKTALLVHLL  243 (444)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (444)
                      ..........................+...................   ...............................
T Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (377)
T c1s2mA_         157 SRDFKTIIEQILSFLPPTHQSLLFSATFPLTVKEFMVKHLHKPYEI---NLMEELTLKGITQYYAFVEERQKLHCLNTLF  233 (377)
T ss_dssp             SHHHHHHHHHHHTTSCSSCEEEEEESCCCHHHHHHHHHHCSSCEEE---SCCSSCBCTTEEEEEEECCGGGHHHHHHHHH
T ss_pred             CCCCCHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHCCCCCCEE---EEECCCCCCCCEEEEEECCCHHHHHHHHHHC
T ss_conf             3322102345664114575056311212200246665215665147---6401356555259999706035567887420


Q ss_pred             CCCCCCEEEEECCCHHHHHHHHHHHHHCCCCCHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEC
Q ss_conf             14678379971384999999999861102331000256420135778776531000134778889974588984489981
Q batch____       244 KQPEATRSIVFVRKRERVHELANWLREAGINNCYLEGEMVQGKRNEAIKRLTEGRVNVLVATDVAARGIDIPDVSHVFNF  323 (444)
Q Consensus       244 ~~~~~~~~lif~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~f~~g~~~ilv~T~~~~~GiDip~v~~VI~~  323 (444)
                      .......+++++++...+.................+++....++......|..+...++++|+++++|+|+|+|++||+|
T Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vlv~T~~~~~GiDip~v~~VI~~  313 (377)
T c1s2mA_         234 SKLQINQAIIFCNSTNRVELLAKKITDLGYSCYYSHARMKQQERNKVFHEFRQGKVRTLVCSDLLTRGIDIQAVNVVINF  313 (377)
T ss_dssp             HHSCCSEEEEECSSHHHHHHHHHHHHHHTCCEEEECTTSCHHHHHHHHHHHHTTSSSEEEESSCSSSSCCCTTEEEEEES
T ss_pred             CCCCCCEEEEEECCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHCCCCCCCCCCEEEEEECCCHHCCCCCCCCCEEEEC
T ss_conf             01345226886230112467787542101332222456420121000000112211343102301123564676389980


Q ss_pred             CCCCCHHHHHHHHHHHCCCCCCEEEEEEECHHHHHHHHHHHHHHCCCCCH
Q ss_conf             98888999876602100389933999987887999999999995670100
Q batch____       324 DMPRSGDTYLHRIGRTARAGRKGTAISLVEAHDHLLLGKVGRYIEEPIKA  373 (444)
Q Consensus       324 ~~p~~~~~~~qr~GR~gR~g~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~  373 (444)
                      |+|.+..+|+||+||+||.|+.|.||+|+++.|...++++++.++.+++.
T Consensus       314 ~~p~s~~~~~Qr~GRagR~g~~g~~i~~~~~~d~~~~~~i~~~l~~~~~~  363 (377)
T c1s2mA_         314 DFPKTAETYLHRIGRSGRFGHLGLAINLINWNDRFNLYKIEQELGTEIAA  363 (377)
T ss_dssp             SCCSSHHHHHHHHCBSSCTTCCEEEEEEECGGGHHHHHHHHHHHTCCCEE
T ss_pred             CCCCCHHHHHHHHHCCCCCCCCEEEEEEECHHHHHHHHHHHHHHCCCHHH
T ss_conf             88879989988621023688825999987888999999999993871445