53 c1a1vA_ Probab=99.97   E-value=4.5e-31  Score=205.74  Aligned_columns=269  Identities=16%

Q ss_pred             CCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHH
Q ss_conf             69989999289984789999999999985021035782799981828999999999999730138841999828786899
Q batch____        40 DGRDVLGSAPTGTGKTAAYLLPALQHLLDFPRKKSGPPRILILTPTRELAMQVSDHARELAKHTHLDIATITGGVAYMNH  119 (444)
Q Consensus        40 ~g~~vii~apTGsGKTl~~~lpil~~i~~~~~~~~~~~~~lii~Pt~~L~~Q~~~~~~~~~~~~~~~~~~~~~~~~~~~~  119 (444)
                      +++.+|++||||||||+++.++++          ..+.++||++|+++|++|+++++++.+   +.......+.      
T Consensus         7 ~~q~~il~apTGsGKT~~~~~~~~----------~~g~~vlvl~P~r~La~~~~~~l~~~~---g~~~~~~~~~------   67 (429)
T c1a1vA_           7 SFQVAHLHAPTGSGKSTKVPAAYA----------AQGYKVLVLNPSVAATLGFGAYMSKAH---GVDPNIRTGV------   67 (429)
T ss_dssp             SCEEEEEECCTTSCTTTHHHHHHH----------TTTCCEEEEESCHHHHHHHHHHHHHHH---SCCCEEECSS------
T ss_pred             CCCEEEEECCCCCCHHHHHHHHHH----------HCCCEEEEECCHHHHHHHHHHHHHHHH---CCCHHHHCCC------
T ss_conf             197699985898878899999999----------779779998463899899999999751---8450122164------


Q ss_pred             HHHHCCCCCEEEECHHHHHHHHHHCCCCHHHCCEEEECCCCCHHCCCCHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHH
Q ss_conf             98621467267505367643321000014331021101432000136114678998735766633776315797789999
Q batch____       120 AEVFSENQDIVVATTGRLLQYIKEENFDCRAVETLILDEADRMLDMGFAQDIEHIAGETRWRKQTLLFSATLEGDAIQDF  199 (444)
Q Consensus       120 ~~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  199 (444)
                       ........+.+.|+++++.....    +..+..+++||.|..........................+.+.+        
T Consensus        68 -~~~~~~~~I~v~T~~~ll~~~~~----l~~~~~VIiDEaH~~~~~~~~~~~~~~~~~~~~~~~~~i~~SAT--------  134 (429)
T c1a1vA_          68 -RTITTGSPITYSTYGKFLADGGS----GGAYDIIICDECHSTDATSILGIGTVLDQAETAGARLVVLATAT--------  134 (429)
T ss_dssp             -CEECCCCSEEEEEHHHHHHTTCC----CCCCSEEEEETTTCCSHHHHHHHHHHHHHTTTTTCSEEEEEESS--------
T ss_pred             -EEEECCCCEEEECCCHHHCCCCC----CCCCCEEEECHHHCCCCCCCHHHHHHHHHHHCCCCCEEEEEECC--------
T ss_conf             -76147986899971187437420----26731798304520342221256888876311888379998148--------


Q ss_pred             HHHHCCCCEEEEECCCCCCCCCCEEEEEECCHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHCCCCCHHCC
Q ss_conf             98608893399514678756652489996492677556678752146783799713849999999998611023310002
Q batch____       200 AERLLEDPVEVSANPSTRERKKIHQWYYRADDLEHKTALLVHLLKQPEATRSIVFVRKRERVHELANWLREAGINNCYLE  279 (444)
Q Consensus       200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lif~~~~~~~~~~~~~l~~~~~~~~~~~  279 (444)
                                  .....................+................+++|||+++.+++.++..|+..+..+..+|
T Consensus       135 ------------~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~g~iLVF~~s~~~~~~la~~L~~~g~~a~~~h  202 (429)
T c1a1vA_         135 ------------PPGSVTVPHPNIEEVALSTTGEIPFYGKAIPLEVIKGGRHLIFCHSKKKCDELAAKLVALGINAVAYY  202 (429)
T ss_dssp             ------------CTTCCCCCCTTEEEEECCSCSSEEETTEEECTHHHHSSEEEEECSSHHHHHHHHHHHHHTTCCEEEEC
T ss_pred             ------------CCCCCCCCCCCEEECCEEEEEEEEHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHHCCCEEEEEC
T ss_conf             ------------54100244550455041331254045554244203678899986998999999999986798299964


Q ss_pred             CCCCCHHHHHHHHHH-------HHHHHHHHHHHHHHHHHC--CCCCCCEEEECCCCCCHHHHHHHHHHHCCCCCCEEEEE
Q ss_conf             564201357787765-------310001347788899745--88984489981988889998766021003899339999
Q batch____       280 GEMVQGKRNEAIKRL-------TEGRVNVLVATDVAARGI--DIPDVSHVFNFDMPRSGDTYLHRIGRTARAGRKGTAIS  350 (444)
Q Consensus       280 ~~~~~~~r~~~~~~f-------~~g~~~ilv~T~~~~~Gi--Dip~v~~VI~~~~p~~~~~~~qr~GR~gR~g~~g~~i~  350 (444)
                      ++.+..++......+       ..|.++++|+|+.+++|+  |++.+..+++...|.|..+|+||+||+|| |+.|.||.
T Consensus       203 ~~~~~~~~~~~~~~vi~aT~~~e~g~i~~VIdt~~~~~gi~~~~~~~~~~~~~~~p~s~~s~~QR~GRaGR-~~~G~~~~  281 (429)
T c1a1vA_         203 RGLDVSVIPTSGDVVVVATDALFTGDFDSVIDCNTVTQTVDFSLDPTFTIETTTLPQDAVSRTQRRGRTGR-GKPGIYRF  281 (429)
T ss_dssp             TTSCGGGSCSSSSEEEEECTTCCCCCBSEEEECCCCEEEEECCCSSSCEEEEECCCCBHHHHHHHHTTBCS-SSCEEEEE
T ss_pred             CCCCHHHCCCCCCEEEEECCCCCCCCEEEEEECCCEEEEEEECCCCCEEEEEEECCCCHHHHHHHHHHHCC-CCCCEEEE
T ss_conf             76996671136858999878430088318996684023455115872379996336899999874666288-99843899


Q ss_pred             EEC
Q ss_conf             878
Q batch____       351 LVE  353 (444)
Q Consensus       351 ~~~  353 (444)
                      ++.
T Consensus       282 l~~  284 (429)
T c1a1vA_         282 VAP  284 (429)
T ss_dssp             SCS
T ss_pred             EEC
T ss_conf             854