Job Description P31827 Confidence 2.71% Date Thu Jan 5 11:48:51 GMT 2012 Rank 38 Aligned Residues 81 % Identity 11% Template d1iwga6 SCOP info Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains Resolution 3.50

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		48	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.		70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.		.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.
Predicted Secondary structure																								.																																						.
Query SS confidence																								.																																						.
Query Sequence		H	Y	T	S	E	S	I	E	R	L	P	T	G	N	G	N	I	S	D	L	L	R	.	T	N	P	A	V	R	M	D	S	T	Q	S	T	S	L	N	Q	G	D	I	R	P	E	K	I	S	I	H	G	A	S	P	Y	Q	N	A	Y	.	L	I	D	G	I	S	A	T	N	N	L	N	P	A	N	E	S	D	A
Query Conservation																								.																																						.
Alig confidence																								.																	.	.	.	.	.	.																.								.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																									.	.	.	.	.	.																								.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		D	I	D	Q	E	K	A	Q	A	L	G	V	S	I	N	D	I	N	T	T	L	G	A	A	W	G	G	S	Y	V	N	D	F	I	D	R	G	R	V	.	.	.	.	.	.	K	K	V	Y	V	M	S	E	A	K	Y	R	M	L	P	D	D	I	G	D	W	Y	V	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure												T															T										T	T			.	.	.	.	.	.									G	G	G	S	S	S	G	G	G	G	T	T				.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																									.	.	.	.	.	.																								.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.							.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.
		126	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	S	A	T	N	I	S	G	M	S	Q	G	Y	Y	L	D	V	S	L	L	D	N	V	T	L	Y	D	S
Query Conservation
Alig confidence		.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	R	A	A	D	G	Q	M	V	P	F	S	A	F	S	S	S	R	W	E	Y	G
Template Known Secondary structure		.	.	.	.	.	.	.			T	T	S					G	G	G	T
Template Predicted Secondary structure		.	.	.	.	.	.	.
Template SS confidence
									792	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions