Phyre 2 Results for P0AA84

Email | l.a.kelley@imperial.ac.uk
Description | P0AA84
Date | Thu Jan 5 11:12:11 GMT 2012
Unique Job ID | f238f6596560a176

Detailed template information |

# | Template | Alignment Coverage | 3D Model | Confidence | % i.d. | Template Information
--- | --- | --- | --- | --- | --- | ---
1 | c3hsiC_ |
|  | 100.0 | 15 | PDB header:transferase Chain: C: PDB Molecule:phosphatidylserine synthase; PDBTitle: crystal structure of phosphatidylserine synthase haemophilus2 influenzae rd kw20
2 | c1v0sA_ |
|  | 100.0 | 16 | PDB header:hydrolase Chain: A: PDB Molecule:phospholipase d; PDBTitle: uninhibited form of phospholipase d from streptomyces sp.2 strain pmf
3 | c1xdoB_ |
|  | 100.0 | 17 | PDB header:transferase Chain: B: PDB Molecule:polyphosphate kinase; PDBTitle: crystal structure of escherichia coli polyphosphate kinase
4 | d1v0wa1 |
|  | 100.0 | 16 | Fold:Phospholipase D/nuclease Superfamily:Phospholipase D/nuclease Family:Phospholipase D
5 | d1xdpa3 |
|  | 99.9 | 15 | Fold:Phospholipase D/nuclease Superfamily:Phospholipase D/nuclease Family:Polyphosphate kinase C-terminal domain
6 | d1byra_ |
|  | 99.9 | 19 | Fold:Phospholipase D/nuclease Superfamily:Phospholipase D/nuclease Family:Nuclease
7 | c2o8rA_ |
|  | 99.9 | 20 | PDB header:transferase Chain: A: PDB Molecule:polyphosphate kinase; PDBTitle: crystal structure of polyphosphate kinase from2 porphyromonas gingivalis
8 | d1v0wa2 |
|  | 99.9 | 16 | Fold:Phospholipase D/nuclease Superfamily:Phospholipase D/nuclease Family:Phospholipase D
9 | d2o8ra3 |
|  | 99.0 | 12 | Fold:Phospholipase D/nuclease Superfamily:Phospholipase D/nuclease Family:Polyphosphate kinase C-terminal domain
10 | d1xdpa4 |
|  | 99.0 | 15 | Fold:Phospholipase D/nuclease Superfamily:Phospholipase D/nuclease Family:Polyphosphate kinase C-terminal domain
11 | d2o8ra4 |
|  | 98.7 | 18 | Fold:Phospholipase D/nuclease Superfamily:Phospholipase D/nuclease Family:Polyphosphate kinase C-terminal domain
12 | c1q32C_ |
|  | 98.4 | 12 | PDB header:replication,transcription,hydrolase Chain: C: PDB Molecule:tyrosyl-dna phosphodiesterase; PDBTitle: crystal structure analysis of the yeast tyrosyl-dna2 phosphodiesterase
13 | c3sq3C_ |
|  | 98.1 | 13 | PDB header:hydrolase Chain: C: PDB Molecule:tyrosyl-dna phosphodiesterase 1; PDBTitle: crystal structure analysis of the yeast tyrosyl-dna phosphodiesterase2 h182a mutant
14 | c2c1lA_ |
|  | 97.7 | 25 | PDB header:hydrolase Chain: A: PDB Molecule:restriction endonuclease; PDBTitle: structure of the bfii restriction endonuclease
15 | d1jy1a2 |
|  | 96.8 | 23 | Fold:Phospholipase D/nuclease Superfamily:Phospholipase D/nuclease Family:Tyrosyl-DNA phosphodiesterase TDP1
16 | c1nopB_ |
|  | 96.7 | 28 | PDB header:hydrolase/dna Chain: B: PDB Molecule:tyrosyl-dna phosphodiesterase 1; PDBTitle: crystal structure of human tyrosyl-dna phosphodiesterase2 (tdp1) in complex with vanadate, dna and a human3 topoisomerase i-derived peptide
17 | d1q32a2 |
|  | 96.4 | 29 | Fold:Phospholipase D/nuclease Superfamily:Phospholipase D/nuclease Family:Tyrosyl-DNA phosphodiesterase TDP1
18 | d1qzqa1 |
|  | 90.6 | 12 | Fold:Phospholipase D/nuclease Superfamily:Phospholipase D/nuclease Family:Tyrosyl-DNA phosphodiesterase TDP1
19 | d1jy1a1 |
|  | 81.0 | 11 | Fold:Phospholipase D/nuclease Superfamily:Phospholipase D/nuclease Family:Tyrosyl-DNA phosphodiesterase TDP1
20 | d2f5tx2 |
|  | 78.8 | 15 | Fold:Phospholipase D/nuclease Superfamily:Phospholipase D/nuclease Family:TrmB middle domain-like
21 | c2f5tX_ |
| not modelled | 71.8 | 15 | PDB header:transcription Chain: X: PDB Molecule:archaeal transcriptional regulator trmb; PDBTitle: crystal structure of the sugar binding domain of the archaeal2 transcriptional regulator trmb
22 | d1q32a1 |
| not modelled | 66.5 | 10 | Fold:Phospholipase D/nuclease Superfamily:Phospholipase D/nuclease Family:Tyrosyl-DNA phosphodiesterase TDP1
23 | c2l82A_ |
| not modelled | 42.6 | 19 | PDB header:de novo protein Chain: A: PDB Molecule:designed protein or32; PDBTitle: solution nmr structure of de novo designed protein, p-loop ntpase2 fold, northeast structural genomics consortium target or32
24 | c2a5hC_ |
| not modelled | 36.5 | 21 | PDB header:isomerase Chain: C: PDB Molecule:l-lysine 2,3-aminomutase; PDBTitle: 2.1 angstrom x-ray crystal structure of lysine-2,3-aminomutase from2 clostridium subterminale sb4, with michaelis analog (l-alpha-lysine3 external aldimine form of pyridoxal-5'-phosphate).
25 | d1o98a1 |
| not modelled | 34.2 | 26 | Fold:2,3-Bisphosphoglycerate-independent phosphoglycerate mutase, substrate-binding domain Superfamily:2,3-Bisphosphoglycerate-independent phosphoglycerate mutase, substrate-binding domain Family:2,3-Bisphosphoglycerate-independent phosphoglycerate mutase, substrate-binding domain
26 | c2o48X_ |
| not modelled | 30.1 | 12 | PDB header:oxidoreductase Chain: X: PDB Molecule:dimeric dihydrodiol dehydrogenase; PDBTitle: crystal structure of mammalian dimeric dihydrodiol dehydrogenase
27 | d1rvga_ |
| not modelled | 28.0 | 25 | Fold:TIM beta/alpha-barrel Superfamily:Aldolase Family:Class II FBP aldolase
28 | d1gvfa_ |
| not modelled | 26.2 | 15 | Fold:TIM beta/alpha-barrel Superfamily:Aldolase Family:Class II FBP aldolase
29 | d1gz0a2 |
| not modelled | 20.0 | 24 | Fold:Bacillus chorismate mutase-like Superfamily:L30e-like Family:RNA 2'-O ribose methyltransferase substrate binding domain
30 | c2hqbA_ |
| not modelled | 17.8 | 15 | PDB header:transcription Chain: A: PDB Molecule:transcriptional activator of comk gene; PDBTitle: crystal structure of a transcriptional activator of comk2 gene from bacillus halodurans
31 | c1t3gB_ |
| not modelled | 17.3 | 18 | PDB header:membrane protein Chain: B: PDB Molecule:x-linked interleukin-1 receptor accessory PDBTitle: crystal structure of the toll/interleukin-1 receptor (tir)2 domain of human il-1rapl
32 | c3dy0B_ |
| not modelled | 16.7 | 33 | PDB header:blood clotting, hydrolase inhibitor Chain: B: PDB Molecule:c-terminus plasma serine protease inhibitor; PDBTitle: crystal structure of cleaved pci bound to heparin
33 | c3kgkA_ |
| not modelled | 16.2 | 13 | PDB header:chaperone Chain: A: PDB Molecule:arsenical resistance operon trans-acting repressor arsd; PDBTitle: crystal structure of arsd
34 | c3rfuC_ |
| not modelled | 15.5 | 21 | PDB header:hydrolase, membrane protein Chain: C: PDB Molecule:copper efflux atpase; PDBTitle: crystal structure of a copper-transporting pib-type atpase
35 | c3ecsD_ |
| not modelled | 15.5 | 13 | PDB header:translation Chain: D: PDB Molecule:translation initiation factor eif-2b subunit PDBTitle: crystal structure of human eif2b alpha
36 | c1lq8H_ |
| not modelled | 15.4 | 33 | PDB header:blood clotting Chain: H: PDB Molecule:plasma serine protease inhibitor; PDBTitle: crystal structure of cleaved protein c inhibitor
37 | c2rjoA_ |
| not modelled | 15.1 | 16 | PDB header:signaling protein Chain: A: PDB Molecule:twin-arginine translocation pathway signal protein; PDBTitle: crystal structure of twin-arginine translocation pathway signal2 protein from burkholderia phytofirmans
38 | c3gbcA_ |
| not modelled | 15.1 | 19 | PDB header:hydrolase Chain: A: PDB Molecule:pyrazinamidase/nicotinamidas pnca; PDBTitle: determination of the crystal structure of the pyrazinamidase from2 m.tuberculosis : a structure-function analysis for prediction3 resistance to pyrazinamide
39 | c2nytB_ |
| not modelled | 14.4 | 12 | PDB header:hydrolase Chain: B: PDB Molecule:probable c->u-editing enzyme apobec-2; PDBTitle: the apobec2 crystal structure and functional implications2 for aid
40 | d1gz0f2 |
| not modelled | 14.2 | 24 | Fold:Bacillus chorismate mutase-like Superfamily:L30e-like Family:RNA 2'-O ribose methyltransferase substrate binding domain
41 | c3db2C_ |
| not modelled | 13.7 | 10 | PDB header:oxidoreductase Chain: C: PDB Molecule:putative nadph-dependent oxidoreductase; PDBTitle: crystal structure of a putative nadph-dependent oxidoreductase2 (dhaf_2064) from desulfitobacterium hafniense dcb-2 at 1.70 a3 resolution
42 | c3s99A_ |
| not modelled | 13.2 | 19 | PDB header:lipid binding protein Chain: A: PDB Molecule:basic membrane lipoprotein; PDBTitle: crystal structure of a basic membrane lipoprotein from brucella2 melitensis, iodide soak
43 | c3h75A_ |
| not modelled | 12.4 | 10 | PDB header:sugar binding protein Chain: A: PDB Molecule:periplasmic sugar-binding domain protein; PDBTitle: crystal structure of a periplasmic sugar-binding protein from the2 pseudomonas fluorescens
44 | c2kjwA_ |
| not modelled | 11.9 | 12 | PDB header:ribosomal protein Chain: A: PDB Molecule:30s ribosomal protein s6; PDBTitle: solution structure and backbone dynamics of the permutant2 p54-55
45 | d1bdga1 |
| not modelled | 11.9 | 15 | Fold:Ribonuclease H-like motif Superfamily:Actin-like ATPase domain Family:Hexokinase
46 | c1o98A_ |
| not modelled | 11.1 | 26 | PDB header:isomerase Chain: A: PDB Molecule:2,3-bisphosphoglycerate-independent PDBTitle: 1.4a crystal structure of phosphoglycerate mutase from2 bacillus stearothermophilus complexed with3 2-phosphoglycerate
47 | d1acoa2 |
| not modelled | 11.0 | 14 | Fold:Aconitase iron-sulfur domain Superfamily:Aconitase iron-sulfur domain Family:Aconitase iron-sulfur domain
48 | d2obba1 |
| not modelled | 11.0 | 11 | Fold:HAD-like Superfamily:HAD-like Family:BT0820-like
49 | c2q4eB_ |
| not modelled | 10.8 | 11 | PDB header:oxidoreductase Chain: B: PDB Molecule:probable oxidoreductase at4g09670; PDBTitle: ensemble refinement of the protein crystal structure of gene product2 from arabidopsis thaliana at4g09670
50 | c2glxD_ |
| not modelled | 9.9 | 13 | PDB header:oxidoreductase Chain: D: PDB Molecule:1,5-anhydro-d-fructose reductase; PDBTitle: crystal structure analysis of bacterial 1,5-af reductase
51 | c2kl8A_ |
| not modelled | 9.4 | 24 | PDB header:de novo protein Chain: A: PDB Molecule:or15; PDBTitle: solution nmr structure of de novo designed ferredoxin-like2 fold protein, northeast structural genomics consortium3 target or15
52 | c3igzB_ |
| not modelled | 9.3 | 26 | PDB header:isomerase Chain: B: PDB Molecule:cofactor-independent phosphoglycerate mutase; PDBTitle: crystal structures of leishmania mexicana phosphoglycerate2 mutase at low cobalt concentration
53 | d1un8a4 |
| not modelled | 9.2 | 16 | Fold:DAK1/DegV-like Superfamily:DAK1/DegV-like Family:DAK1
54 | d1vb5a_ |
| not modelled | 9.2 | 15 | Fold:NagB/RpiA/CoA transferase-like Superfamily:NagB/RpiA/CoA transferase-like Family:IF2B-like
55 | c2r60A_ |
| not modelled | 8.8 | 28 | PDB header:transferase Chain: A: PDB Molecule:glycosyl transferase, group 1; PDBTitle: structure of apo sucrose phosphate synthase (sps) of2 halothermothrix orenii
56 | c2ixaA_ |
| not modelled | 8.4 | 13 | PDB header:hydrolase Chain: A: PDB Molecule:alpha-n-acetylgalactosaminidase; PDBTitle: a-zyme, n-acetylgalactosaminidase
57 | c2b34C_ |
| not modelled | 8.3 | 21 | PDB header:hydrolase Chain: C: PDB Molecule:mar1 ribonuclease; PDBTitle: structure of mar1 ribonuclease from caenorhabditis elegans
58 | d1ydwa1 |
| not modelled | 8.2 | 10 | Fold:NAD(P)-binding Rossmann-fold domains Superfamily:NAD(P)-binding Rossmann-fold domains Family:Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
59 | d1x94a_ |
| not modelled | 8.2 | 13 | Fold:SIS domain Superfamily:SIS domain Family:mono-SIS domain
60 | c3oziB_ |
| not modelled | 8.0 | 20 | PDB header:plant protein Chain: B: PDB Molecule:l6tr; PDBTitle: crystal structure of the tir domain from the flax disease resistance2 protein l6
61 | c2wltA_ |
| not modelled | 7.9 | 18 | PDB header:hydrolase Chain: A: PDB Molecule:l-asparaginase; PDBTitle: the crystal structure of helicobacter pylori l-asparaginase2 at 1.4 a resolution
62 | c2klnA_ |
| not modelled | 7.7 | 11 | PDB header:transport protein Chain: A: PDB Molecule:probable sulphate-transport transmembrane protein, cog0659; PDBTitle: solution structure of stas domain of rv1739c from m. tuberculosis
63 | c2x7mA_ |
| not modelled | 7.7 | 8 | PDB header:hydrolase Chain: A: PDB Molecule:archaemetzincin; PDBTitle: crystal structure of archaemetzincin (amza) from methanopyrus2 kandleri at 1.5 a resolution
64 | c3l2iB_ |
| not modelled | 7.5 | 12 | PDB header:lyase Chain: B: PDB Molecule:3-dehydroquinate dehydratase; PDBTitle: 1.85 angstrom crystal structure of the 3-dehydroquinate dehydratase2 (arod) from salmonella typhimurium lt2.
65 | c2krcA_ |
| not modelled | 7.4 | 8 | PDB header:transcription Chain: A: PDB Molecule:dna-directed rna polymerase subunit delta; PDBTitle: solution structure of the n-terminal domain of bacillus2 subtilis delta subunit of rna polymerase
66 | c2j37W_ |
| not modelled | 7.1 | 11 | PDB header:ribosome Chain: W: PDB Molecule:signal recognition particle 54 kda protein PDBTitle: model of mammalian srp bound to 80s rncs
67 | d1yaca_ |
| not modelled | 7.1 | 21 | Fold:Isochorismatase-like hydrolases Superfamily:Isochorismatase-like hydrolases Family:Isochorismatase-like hydrolases
68 | c3a11D_ |
| not modelled | 6.9 | 17 | PDB header:isomerase Chain: D: PDB Molecule:translation initiation factor eif-2b, delta PDBTitle: crystal structure of ribose-1,5-bisphosphate isomerase from2 thermococcus kodakaraensis kod1
69 | c2y92A_ |
| not modelled | 6.7 | 10 | PDB header:immune system Chain: A: PDB Molecule:toll/interleukin-1 receptor domain-containing adapter PDBTitle: crystal structure of mal adaptor protein
70 | c3euwB_ |
| not modelled | 6.6 | 12 | PDB header:oxidoreductase Chain: B: PDB Molecule:myo-inositol dehydrogenase; PDBTitle: crystal structure of a myo-inositol dehydrogenase from corynebacterium2 glutamicum atcc 13032
71 | c1yd6A_ |
| not modelled | 6.6 | 20 | PDB header:dna binding protein Chain: A: PDB Molecule:uvrc; PDBTitle: crystal structure of the giy-yig n-terminal endonuclease2 domain of uvrc from bacillus caldotenax
72 | c2d6fA_ |
| not modelled | 6.6 | 14 | PDB header:ligase/rna Chain: A: PDB Molecule:glutamyl-trna(gln) amidotransferase subunit d; PDBTitle: crystal structure of glu-trna(gln) amidotransferase in the2 complex with trna(gln)
73 | d1v4sa1 |
| not modelled | 6.5 | 20 | Fold:Ribonuclease H-like motif Superfamily:Actin-like ATPase domain Family:Hexokinase
74 | c5acnA_ |
| not modelled | 6.4 | 16 | PDB header:lyase(carbon-oxygen) Chain: A: PDB Molecule:aconitase; PDBTitle: structure of activated aconitase. formation of the (4fe-4s)2 cluster in the crystal
75 | c2iksA_ |
| not modelled | 6.2 | 11 | PDB header:transcription Chain: A: PDB Molecule:dna-binding transcriptional dual regulator; PDBTitle: crystal structure of n-terminal truncated dna-binding transcriptional2 dual regulator from escherichia coli k12
76 | d1nnsa_ |
| not modelled | 6.2 | 19 | Fold:Glutaminase/Asparaginase Superfamily:Glutaminase/Asparaginase Family:Glutaminase/Asparaginase
77 | c3brsA_ |
| not modelled | 6.2 | 17 | PDB header:transport protein Chain: A: PDB Molecule:periplasmic binding protein/laci transcriptional regulator; PDBTitle: crystal structure of sugar transporter from clostridium2 phytofermentans
78 | c3hvbB_ |
| not modelled | 6.1 | 14 | PDB header:hydrolase Chain: B: PDB Molecule:protein fimx; PDBTitle: crystal structure of the dual-domain ggdef-eal module of2 fimx from pseudomonas aeruginosa
79 | c3pm6B_ |
| not modelled | 5.8 | 16 | PDB header:lyase Chain: B: PDB Molecule:putative fructose-bisphosphate aldolase; PDBTitle: crystal structure of a putative fructose-1,6-biphosphate aldolase from2 coccidioides immitis solved by combined sad mr
80 | c3i5mA_ |
| not modelled | 5.8 | 18 | PDB header:oxidoreductase Chain: A: PDB Molecule:putative leucoanthocyanidin reductase 1; PDBTitle: structure of the apo form of leucoanthocyanidin reductase from vitis2 vinifera
81 | c1l5jB_ |
| not modelled | 5.7 | 16 | PDB header:lyase Chain: B: PDB Molecule:aconitate hydratase 2; PDBTitle: crystal structure of e. coli aconitase b.
82 | c3q2kB_ |
| not modelled | 5.7 | 16 | PDB header:oxidoreductase Chain: B: PDB Molecule:oxidoreductase; PDBTitle: crystal structure of the wlba dehydrogenase from bordetella pertussis2 in complex with nadh and udp-glcnaca
83 | d2qalf1 |
| not modelled | 5.7 | 12 | Fold:Ferredoxin-like Superfamily:Ribosomal protein S6 Family:Ribosomal protein S6
84 | c2qbbF_ |
| not modelled | 5.7 | 12 | PDB header:ribosome Chain: F: PDB Molecule:30s ribosomal protein s6; PDBTitle: crystal structure of the bacterial ribosome from2 escherichia coli in complex with gentamicin. this file3 contains the 30s subunit of the second 70s ribosome, with4 gentamicin bound. the entire crystal structure contains5 two 70s ribosomes and is described in remark 400.
85 | d1x9ga_ |
| not modelled | 5.6 | 11 | Fold:Isochorismatase-like hydrolases Superfamily:Isochorismatase-like hydrolases Family:Isochorismatase-like hydrolases
86 | c3ezyB_ |
| not modelled | 5.5 | 13 | PDB header:structural genomics, unknown function Chain: B: PDB Molecule:dehydrogenase; PDBTitle: crystal structure of probable dehydrogenase tm_0414 from2 thermotoga maritima
87 | d2b5ic2 |
| not modelled | 5.4 | 33 | Fold:Immunoglobulin-like beta-sandwich Superfamily:Fibronectin type III Family:Fibronectin type III
88 | c3brqA_ |
| not modelled | 5.3 | 13 | PDB header:transcription regulator Chain: A: PDB Molecule:hth-type transcriptional regulator ascg; PDBTitle: crystal structure of the escherichia coli transcriptional repressor2 ascg
89 | c3bleA_ |
| not modelled | 5.3 | 10 | PDB header:transferase Chain: A: PDB Molecule:citramalate synthase from leptospira interrogans; PDBTitle: crystal structure of the catalytic domain of licms in2 complexed with malonate
90 | c3ktbD_ |
| not modelled | 5.2 | 21 | PDB header:transcription regulator Chain: D: PDB Molecule:arsenical resistance operon trans-acting repressor; PDBTitle: crystal structure of arsenical resistance operon trans-acting2 repressor from bacteroides vulgatus atcc 8482
91 | c3c8fA_ |
| not modelled | 5.1 | 12 | PDB header:oxidoreductase Chain: A: PDB Molecule:pyruvate formate-lyase 1-activating enzyme; PDBTitle: 4fe-4s-pyruvate formate-lyase activating enzyme with2 partially disordered adomet