BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= batch____ (70 letters) Database: uniref50.fasta 3,077,464 sequences; 1,040,396,356 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value UniRef50_P58726 Cold shock-like protein cspJ n=322 Tax=cellular ... 121 6e-27 UniRef50_P0A363 Cold shock-like protein cspB n=58 Tax=Enterobact... 119 3e-26 UniRef50_P36995 Cold shock-like protein cspB n=24 Tax=Bacteria R... 116 3e-25 UniRef50_P0A974 Cold shock-like protein cspE n=233 Tax=Gammaprot... 101 7e-21 UniRef50_P0A9Y8 Cold shock-like protein cspC n=125 Tax=Enterobac... 99 3e-20 UniRef50_A9IR63 Cold shock-like protein n=13 Tax=cellular organi... 93 3e-18 UniRef50_P62171 Cold shock-like protein cspC n=85 Tax=Bacteria R... 87 2e-16 UniRef50_Q4KEW6 Cold shock protein capa n=14 Tax=Bacteria RepID=... 87 2e-16 UniRef50_P54584 Cold shock protein n=9 Tax=Bacteria RepID=CSP_ARTGO 87 2e-16 UniRef50_B5Y9M2 Conserved domain protein n=20 Tax=Bacteria RepID... 86 4e-16 UniRef50_O30875 Major cold shock protein n=98 Tax=cellular organ... 86 5e-16 UniRef50_P71478 Cold shock protein 1 n=20 Tax=Firmicutes RepID=C... 85 7e-16 UniRef50_Q7NT55 Cold shock transcription regulator protein n=1 T... 83 2e-15 UniRef50_P0A356 Cold shock-like protein cspLA n=163 Tax=root Rep... 83 3e-15 UniRef50_Q81DK5 Cold shock-like protein cspE n=713 Tax=Bacteria ... 83 3e-15 UniRef50_Q3AFQ5 Cold shock protein CspC n=14 Tax=Bacteria RepID=... 82 4e-15 UniRef50_A5BWB0 Putative uncharacterized protein n=1 Tax=Vitis v... 82 4e-15 UniRef50_C6VN45 Cold shock protein CspC n=8 Tax=Firmicutes RepID... 82 5e-15 UniRef50_Q2LQ45 Cold shock protein n=49 Tax=Bacteria RepID=Q2LQ4... 82 6e-15 UniRef50_C9KNJ1 Conserved domain protein n=1 Tax=Mitsuokella mul... 81 8e-15 UniRef50_B5HGK4 Cold shock protein n=10 Tax=Streptomyces RepID=B... 81 9e-15 UniRef50_A4G7K9 Cold shock protein CspD n=3 Tax=Bacteria RepID=A... 81 1e-14 UniRef50_Q03A67 Cold-shock DNA-binding protein family n=16 Tax=F... 81 1e-14 UniRef50_Q1LCU6 Cold-shock DNA-binding protein family n=7 Tax=Pr... 80 1e-14 UniRef50_Q0JY13 Cold shock protein, DNA-binding n=2 Tax=Burkhold... 80 2e-14 UniRef50_Q1DBV4 Cold-shock protein CspA n=10 Tax=cellular organi... 80 2e-14 UniRef50_C7Q9X4 Cold-shock DNA-binding domain protein n=31 Tax=B... 80 2e-14 UniRef50_Q56922 Major cold shock protein (Fragment) n=404 Tax=Ba... 80 2e-14 UniRef50_A5N624 CspA n=10 Tax=cellular organisms RepID=A5N624_CLOK5 80 2e-14 UniRef50_D1AYL8 Cold-shock DNA-binding domain protein n=3 Tax=ce... 80 2e-14 UniRef50_Q3IC55 Cold shock protein n=52 Tax=Bacteria RepID=Q3IC5... 80 3e-14 UniRef50_Q816H3 Cold shock-like protein cspD n=370 Tax=Bacteria ... 79 3e-14 UniRef50_O54310 Cold shock-like protein n=7 Tax=Bacteria RepID=C... 79 4e-14 UniRef50_Q5HPE0 Cold shock protein cspA n=113 Tax=Bacteria RepID... 79 4e-14 UniRef50_Q0BPU3 Cold shock protein n=2 Tax=Alphaproteobacteria R... 79 5e-14 UniRef50_D1IX09 Whole genome shotgun sequence of line PN40024, s... 79 6e-14 UniRef50_Q08VT0 Conserved domain protein n=3 Tax=Bacteria RepID=... 79 6e-14 UniRef50_Q2P2A6 Major cold shock protein n=21 Tax=Gammaproteobac... 78 7e-14 UniRef50_Q1J0P4 Cold-shock DNA-binding domain protein n=9 Tax=Ba... 78 1e-13 UniRef50_P72192 Temperature acclimation protein B (Fragment) n=8... 78 1e-13 UniRef50_C0QFU1 CspA n=4 Tax=cellular organisms RepID=C0QFU1_DESAH 77 1e-13 UniRef50_A3BPB0 Putative uncharacterized protein n=4 Tax=Oryza s... 77 2e-13 UniRef50_B9KKC8 Cold-shock DNA-binding protein family n=21 Tax=R... 77 2e-13 UniRef50_O67327 Cold shock-like protein n=2 Tax=Bacteria RepID=C... 77 2e-13 UniRef50_B4U902 Cold-shock DNA-binding domain protein n=9 Tax=Ba... 77 2e-13 UniRef50_Q01761 Cold shock-like protein 7.0 n=356 Tax=cellular o... 77 2e-13 UniRef50_C4WXL4 ACYPI009849 protein n=3 Tax=cellular organisms R... 77 2e-13 UniRef50_C5RTX4 Cold-shock DNA-binding domain protein n=13 Tax=c... 76 3e-13 UniRef50_B0S1I2 Cold shock protein n=4 Tax=cellular organisms Re... 76 3e-13 UniRef50_A3XD40 Cold shock family protein n=5 Tax=Rhodobacterace... 76 4e-13 UniRef50_B0KQL2 Cold-shock DNA-binding domain protein n=2 Tax=Ga... 76 4e-13 UniRef50_A3Y9L0 Cold-shock DNA-binding domain protein n=2 Tax=Ma... 76 4e-13 UniRef50_C1F531 Cold shock protein n=1 Tax=Acidobacterium capsul... 75 5e-13 UniRef50_Q11GE9 Cold-shock DNA-binding protein family n=10 Tax=A... 75 6e-13 UniRef50_P95459 Major cold shock protein cspA n=33 Tax=cellular ... 75 6e-13 UniRef50_A1S709 Cold-shock DNA-binding protein family n=6 Tax=ce... 75 6e-13 UniRef50_Q2NK56 Cold shock protein n=6 Tax=Bacteria RepID=Q2NK56... 75 6e-13 UniRef50_Q4FT63 Cold-shock DNA-binding protein family n=10 Tax=c... 75 8e-13 UniRef50_B7C7U1 Putative uncharacterized protein n=1 Tax=Eubacte... 75 9e-13 UniRef50_Q88P68 Cold-shock domain family protein n=52 Tax=Bacter... 74 1e-12 UniRef50_B9JZ17 Cold shock protein n=106 Tax=Alphaproteobacteria... 74 1e-12 UniRef50_Q2LY24 Cold shock protein n=11 Tax=Bacteria RepID=Q2LY2... 74 1e-12 UniRef50_A4VMZ2 Cold shock protein CspA n=2 Tax=Gammaproteobacte... 74 1e-12 UniRef50_C9Y043 Cold shock-like protein cspD n=3 Tax=Enterobacte... 74 1e-12 UniRef50_B8C1C4 Cold-shock DNA-binding domain-containing protein... 74 2e-12 UniRef50_A1JMC2 Cold shock-like protein cspD (Cold shock-like pr... 74 2e-12 UniRef50_O65639 Glycine-rich protein n=10 Tax=cellular organisms... 74 2e-12 UniRef50_C4FWF1 Putative uncharacterized protein n=1 Tax=Catonel... 73 3e-12 UniRef50_P27484 Glycine-rich protein 2 n=5 Tax=Viridiplantae Rep... 73 3e-12 UniRef50_A4TN10 Cold-shock DNA-binding protein family n=35 Tax=E... 72 4e-12 UniRef50_B3QZU5 Cold shock-like protein n=1 Tax=Candidatus Phyto... 72 4e-12 UniRef50_B4S1R6 Stress response protein CspD n=5 Tax=cellular or... 72 5e-12 UniRef50_D1H869 Whole genome shotgun sequence of line PN40024, s... 72 6e-12 UniRef50_P0A970 Cold shock-like protein cspD n=101 Tax=Gammaprot... 72 6e-12 UniRef50_Q5CVY2 Cold shock RNA binding domain of the OB fold (Fr... 72 7e-12 UniRef50_A5VRM7 Cold-shock family protein n=37 Tax=Brucellaceae ... 72 7e-12 UniRef50_A5VRP5 Cold-shock family protein n=37 Tax=Brucellaceae ... 72 8e-12 UniRef50_A4RZ32 Predicted protein n=1 Tax=Ostreococcus lucimarin... 71 8e-12 UniRef50_C4Z3Q0 Cold shock protein (Beta-ribbon, CspA family) n=... 71 1e-11 UniRef50_C8P136 Conserved domain protein n=6 Tax=Bacteria RepID=... 71 1e-11 UniRef50_D0KX28 Cold-shock DNA-binding domain protein n=1 Tax=Ha... 71 1e-11 UniRef50_B4RGZ9 Cold-shock DNA-binding domain protein n=75 Tax=B... 71 1e-11 UniRef50_A2SIM9 Cold-shock DNA-binding protein family n=16 Tax=P... 70 1e-11 UniRef50_Q30QF0 Cold-shock DNA-binding protein family n=12 Tax=P... 70 2e-11 UniRef50_P55390 Probable cold shock protein y4cH n=110 Tax=Prote... 70 2e-11 UniRef50_B3PL56 Cold-shock protein CspD n=34 Tax=Bacteria RepID=... 70 3e-11 UniRef50_A4XHY2 Cold-shock DNA-binding protein family n=3 Tax=ce... 69 4e-11 UniRef50_B3RZU4 Putative uncharacterized protein n=1 Tax=Trichop... 69 4e-11 UniRef50_Q9VRN5 Protein lin-28 homolog n=1 Tax=Drosophila melano... 69 4e-11 UniRef50_B3EP04 Cold-shock DNA-binding domain protein n=13 Tax=C... 69 4e-11 UniRef50_B0T8T3 Cold-shock DNA-binding domain protein n=40 Tax=B... 69 4e-11 UniRef50_Q0SKK0 Cold shock protein n=1 Tax=Rhodococcus jostii RH... 69 6e-11 UniRef50_A4VLV8 Cold-shock protein CspD n=5 Tax=Gammaproteobacte... 69 6e-11 UniRef50_A4VNB0 Cold-shock DNA-binding protein n=75 Tax=Bacteria... 68 7e-11 UniRef50_Q9RBP7 Cold shock protein 7.4 (Fragment) n=2 Tax=Rhodoc... 68 8e-11 UniRef50_A8I8L3 Cold-shock DNA-binding domain n=1 Tax=Azorhizobi... 68 1e-10 UniRef50_Q9Z3S6 Cold shock protein cspA n=72 Tax=Bacteria RepID=... 67 1e-10 UniRef50_D0MDE8 Cold-shock DNA-binding domain protein n=1 Tax=Rh... 67 1e-10 UniRef50_A8QHS7 'Cold-shock' DNA-binding domain containing prote... 67 1e-10 UniRef50_Q38896 Glycine-rich protein 2b n=125 Tax=cellular organ... 67 2e-10 UniRef50_UPI000155BE86 PREDICTED: hypothetical protein, partial ... 67 2e-10 UniRef50_B5A4M3 Glycine-rich nucleic acid binding protein n=1 Ta... 67 2e-10 UniRef50_D1C6U7 Cold-shock DNA-binding domain protein n=1 Tax=Sp... 67 2e-10 UniRef50_B1MZK9 Cold shock protein n=15 Tax=Bacteria RepID=B1MZK... 67 2e-10 UniRef50_B1Z823 Cold-shock DNA-binding domain protein n=34 Tax=A... 67 2e-10 UniRef50_B6QZ94 Cold-shock DNA-binding domain protein n=1 Tax=Ps... 67 2e-10 UniRef50_Q1GT29 Cold-shock DNA-binding protein family n=1 Tax=Sp... 66 4e-10 UniRef50_P41824 Y-box factor homolog n=1 Tax=Aplysia californica... 66 4e-10 UniRef50_B5AU39 Y-box protein Lyb1 n=1 Tax=Lethenteron japonicum... 65 5e-10 UniRef50_A9W6T1 Cold-shock protein DNA-binding n=32 Tax=Bacteria... 65 5e-10 UniRef50_Q2RNN9 Cold-shock DNA-binding protein family n=2 Tax=Rh... 65 5e-10 UniRef50_Q5JKD6 Cold shock domain protein 2-like protein n=1 Tax... 65 5e-10 UniRef50_D1BKC9 Cold shock domain protein CspD n=31 Tax=Bacteria... 65 5e-10 UniRef50_B4SFC0 Cold-shock DNA-binding domain protein n=1 Tax=Pe... 65 6e-10 UniRef50_Q9AN51 Blr1947 protein n=2 Tax=Bradyrhizobium japonicum... 65 6e-10 UniRef50_B9F7B8 Putative uncharacterized protein n=1 Tax=Oryza s... 65 6e-10 UniRef50_Q52287 Major cold shock protein (Fragment) n=22 Tax=cel... 65 8e-10 UniRef50_B4SCC3 Cold-shock DNA-binding domain protein n=4 Tax=ce... 65 9e-10 UniRef50_Q1YTJ3 Cold shock protein n=1 Tax=gamma proteobacterium... 65 9e-10 UniRef50_B3DPK3 Cold shock protein n=7 Tax=Bifidobacterium RepID... 65 9e-10 UniRef50_A8ILK3 Cold shock protein n=9 Tax=Proteobacteria RepID=... 65 9e-10 UniRef50_Q90650 Rous sarcoma virus transcription enhancer factor... 64 1e-09 UniRef50_C5RAK7 Cold shock protein CspA n=1 Tax=Weissella parame... 64 1e-09 UniRef50_Q2S0T4 Conserved domain protein n=2 Tax=Bacteria RepID=... 64 1e-09 UniRef50_Q5YVF2 Putative cold shock protein n=1 Tax=Nocardia far... 64 1e-09 UniRef50_P16989 DNA-binding protein A n=144 Tax=cellular organis... 64 2e-09 UniRef50_B0UEI2 Cold-shock DNA-binding domain protein n=11 Tax=A... 64 2e-09 UniRef50_D1A5P8 Cold-shock DNA-binding domain protein n=33 Tax=A... 64 2e-09 UniRef50_UPI000194E5B1 PREDICTED: Rous sarcoma virus transcripti... 63 2e-09 UniRef50_C8WCQ1 Cold-shock DNA-binding domain protein n=18 Tax=A... 63 2e-09 UniRef50_C1E859 Cold-shock protein with RNA binding domain n=2 T... 63 3e-09 UniRef50_Q1NG42 Cold shock protein n=3 Tax=Alphaproteobacteria R... 63 3e-09 UniRef50_D0MCR5 Cold-shock DNA-binding domain protein n=1 Tax=Rh... 63 3e-09 UniRef50_B7PM92 PIN domain-containing RNA-binding protein, putat... 63 3e-09 UniRef50_Q4H2L8 Y-box protein 1/2/3 n=2 Tax=Ciona intestinalis R... 63 4e-09 UniRef50_B8KR01 'Cold-shock' DNA-binding domain protein n=1 Tax=... 63 4e-09 UniRef50_Q2W0B3 Cold shock protein n=3 Tax=Magnetospirillum RepI... 62 4e-09 UniRef50_A0Z255 Cold shock protein, CspA family-like protein n=1... 62 4e-09 UniRef50_D0LU49 Cold-shock DNA-binding domain protein n=1 Tax=Ha... 62 5e-09 UniRef50_D2QP83 Cold-shock DNA-binding domain protein n=5 Tax=Ba... 62 5e-09 UniRef50_UPI000051480C PREDICTED: similar to ypsilon schachtel C... 62 6e-09 UniRef50_Q016S2 Putative nucleic acid binding protein (ISS) n=1 ... 62 6e-09 UniRef50_UPI0000589074 PREDICTED: similar to ENSANGP00000011455 ... 62 7e-09 UniRef50_P46449 Cold shock-like protein cspD n=53 Tax=Bacteria R... 62 7e-09 UniRef50_C4QN73 Y box binding protein, putative n=4 Tax=Bilateri... 62 8e-09 UniRef50_C4WSK9 ACYPI003867 protein n=1 Tax=Acyrthosiphon pisum ... 61 9e-09 UniRef50_A0NEN6 AGAP006108-PA n=4 Tax=Culicimorpha RepID=A0NEN6_... 61 1e-08 UniRef50_B7RWZ3 'Cold-shock' DNA-binding domain protein n=1 Tax=... 61 1e-08 UniRef50_B6KPP5 Glycine-rich protein 2, putative n=3 Tax=Toxopla... 61 1e-08 UniRef50_C4QN75 Y box binding protein, putative n=10 Tax=cellula... 61 1e-08 UniRef50_D0Z9M8 Cold shock-like protein n=3 Tax=Enterobacteriace... 60 1e-08 UniRef50_O46173 Y-box protein n=14 Tax=cellular organisms RepID=... 60 2e-08 UniRef50_Q90WH1 Cold-shock domain protein (Fragment) n=4 Tax=Per... 60 2e-08 UniRef50_O62213 Protein F33A8.3, confirmed by transcript evidenc... 60 2e-08 UniRef50_Q4ZRK5 Cold-shock protein, DNA-binding n=10 Tax=Pseudom... 60 3e-08 UniRef50_P91306 Y-box protein 2 n=6 Tax=Caenorhabditis RepID=P91... 60 3e-08 UniRef50_UPI0001555D69 PREDICTED: similar to LD37574p, partial n... 60 3e-08 UniRef50_A0R441 'Cold-shock' DNA-binding domain protein n=18 Tax... 59 3e-08 UniRef50_Q2S3Y3 'Cold-shock' DNA-binding domain, putative n=1 Ta... 59 3e-08 UniRef50_Q4UBG6 Cold shock protein, putative n=2 Tax=Theileria R... 59 3e-08 UniRef50_C4K358 RNA chaperone, transcription antiterminator n=3 ... 59 4e-08 UniRef50_A1U3R2 Cold-shock DNA-binding protein family n=3 Tax=Ma... 59 4e-08 UniRef50_Q47TE2 Cold-shock DNA-binding protein family n=9 Tax=Ac... 59 5e-08 UniRef50_Q0RYK4 Probable cold shock protein CspA n=1 Tax=Rhodoco... 59 5e-08 UniRef50_C0Z2E8 AT4G38680 protein n=103 Tax=cellular organisms R... 59 5e-08 UniRef50_A1U1H2 Cold-shock DNA-binding protein family n=5 Tax=Ga... 59 5e-08 UniRef50_Q2RQP4 Cold-shock DNA-binding protein family n=1 Tax=Rh... 59 5e-08 UniRef50_A0PKZ5 Cold shock-like protein B CspB n=78 Tax=Actinomy... 59 6e-08 UniRef50_Q9Y2T7 Y-box-binding protein 2 n=21 Tax=Tetrapoda RepID... 59 6e-08 UniRef50_UPI00004F1407 PREDICTED: similar to CSDA protein n=1 Ta... 59 6e-08 UniRef50_Q1RLA8 Zinc finger protein n=1 Tax=Ciona intestinalis R... 59 6e-08 UniRef50_A8PLB9 'Cold-shock' DNA-binding domain containing prote... 59 6e-08 UniRef50_Q1QLF4 Cold-shock DNA-binding protein family n=1 Tax=Ni... 59 7e-08 UniRef50_D1U4V2 Cold-shock DNA-binding domain protein n=1 Tax=De... 59 7e-08 UniRef50_A9KN41 Cold-shock DNA-binding domain protein n=22 Tax=F... 58 7e-08 UniRef50_Q0VN88 Cold-shock domain family protein n=2 Tax=Alcaniv... 58 8e-08 UniRef50_A5VJ42 Cold-shock DNA-binding protein family n=10 Tax=L... 58 8e-08 UniRef50_Q1RHK6 Cold shock-like protein cspA n=15 Tax=Rickettsia... 58 1e-07 UniRef50_C8SGB1 Cold-shock DNA-binding domain protein n=4 Tax=Me... 58 1e-07 UniRef50_A7HXE8 Putative cold-shock DNA-binding domain protein n... 57 1e-07 UniRef50_UPI0000F32A39 PREDICTED: Bos taurus similar to transcri... 57 1e-07 UniRef50_B6IXJ6 Cold shock-like protein CspA n=1 Tax=Rhodospiril... 57 1e-07 UniRef50_Q7NNC3 Gsr0488 protein n=1 Tax=Gloeobacter violaceus Re... 57 2e-07 UniRef50_B3QHW3 Cold-shock DNA-binding domain protein n=92 Tax=A... 57 2e-07 UniRef50_B5X2B2 Y-box-binding protein 2-A n=1 Tax=Salmo salar Re... 57 2e-07 UniRef50_A3YF52 Cold-shock protein, DNA-binding n=2 Tax=Marinomo... 57 2e-07 UniRef50_O13015 Y box protein 2 n=4 Tax=Clupeocephala RepID=O130... 57 2e-07 UniRef50_Q2RWM8 Cold-shock DNA-binding protein family n=1 Tax=Rh... 57 2e-07 UniRef50_A0M1Q5 Cold shock-like protein n=13 Tax=Bacteria RepID=... 57 2e-07 UniRef50_A1UT19 Cold-shock DNA-binding family protein n=1 Tax=Ba... 57 3e-07 UniRef50_B9MXF4 Predicted protein n=2 Tax=Populus trichocarpa Re... 56 3e-07 UniRef50_B7G5B5 Predicted protein n=1 Tax=Phaeodactylum tricornu... 56 3e-07 UniRef50_D2QU65 Cold-shock DNA-binding domain protein n=23 Tax=B... 56 3e-07 UniRef50_Q9EZJ7 Cold shock-like protein CspE (Fragment) n=1 Tax=... 56 3e-07 UniRef50_B9KHN5 Cold shock protein (CspA) n=10 Tax=Anaplasmatace... 56 3e-07 UniRef50_A4V6J7 Y-Box factor protein (Fragment) n=1 Tax=Dugesia ... 56 4e-07 UniRef50_A3YG84 Cold-shock protein CspD n=2 Tax=Marinomonas RepI... 56 4e-07 UniRef50_Q5Z0N3 Putative cold shock protein n=2 Tax=Bacteria Rep... 55 5e-07 UniRef50_B0VIQ0 Cold-shock domain family protein n=2 Tax=Bacteri... 55 5e-07 UniRef50_A8NIV0 'Cold-shock' DNA-binding domain containing prote... 55 5e-07 UniRef50_UPI00017B0A95 UPI00017B0A95 related cluster n=1 Tax=Tet... 55 5e-07 UniRef50_C6C161 Cold-shock DNA-binding domain protein n=1 Tax=De... 55 5e-07 UniRef50_B9T6D3 Cellular nucleic acid binding protein, putative ... 55 6e-07 UniRef50_Q23960 Y-box protein n=1 Tax=Dugesia japonica RepID=Q23... 55 7e-07 UniRef50_A5V9E9 Cold-shock DNA-binding protein family n=2 Tax=ce... 55 8e-07 UniRef50_C6A7D6 Cold shock protein n=5 Tax=Bifidobacteriaceae Re... 55 1e-06 UniRef50_UPI0001B5872A cold-shock DNA-binding domain protein n=1... 54 1e-06 UniRef50_A7BYF1 Putative uncharacterized protein n=1 Tax=Beggiat... 54 1e-06 UniRef50_D2RAW4 Cold-shock DNA-binding domain protein n=2 Tax=Bi... 54 1e-06 UniRef50_B7RPT8 Cold shock protein n=1 Tax=Roseobacter sp. GAI10... 54 1e-06 UniRef50_Q03EZ0 Cold-shock DNA-binding protein family n=1 Tax=Pe... 54 2e-06 UniRef50_Q1AY27 Cold-shock DNA-binding protein family n=10 Tax=B... 54 2e-06 UniRef50_C9NB66 Cold-shock DNA-binding domain protein n=1 Tax=St... 54 2e-06 UniRef50_B9JBF9 Cold shock protein n=1 Tax=Agrobacterium radioba... 54 2e-06 UniRef50_B8BT01 Predicted protein (Fragment) n=1 Tax=Thalassiosi... 54 2e-06 UniRef50_Q4SGH3 Chromosome undetermined SCAF14594, whole genome ... 54 2e-06 UniRef50_Q2RZT3 Conserved domain protein n=2 Tax=Salinibacter ru... 53 2e-06 UniRef50_Q5YWN3 Putative cold shock protein n=1 Tax=Nocardia far... 53 3e-06 UniRef50_B4RAZ9 Cold-shock DNA-binding domain protein n=6 Tax=Ca... 53 3e-06 UniRef50_Q013V8 Glycogen debranching enzyme (ISS) n=1 Tax=Ostreo... 53 4e-06 UniRef50_C0WXT4 Cold shock protein Csp n=3 Tax=Lactobacillus fer... 52 5e-06 UniRef50_A6ESQ3 Cold shock protein n=2 Tax=Bacteroidetes RepID=A... 52 6e-06 UniRef50_D1S746 Cold-shock DNA-binding domain protein n=1 Tax=Mi... 52 6e-06 UniRef50_A0ACJ4 Putative DNA-binding protein n=2 Tax=Streptomyce... 52 6e-06 UniRef50_P92186 Protein lin-28 n=5 Tax=Caenorhabditis RepID=LIN2... 52 6e-06 UniRef50_Q9XTJ6 Protein Y39A1C.3, confirmed by transcript eviden... 52 7e-06 UniRef50_Q1AWL7 Cold-shock DNA-binding protein family n=2 Tax=ce... 52 9e-06 UniRef50_B9K345 CspA-like protein n=3 Tax=Agrobacterium RepID=B9... 51 1e-05 UniRef50_Q17JD9 Putative uncharacterized protein n=1 Tax=Aedes a... 51 1e-05 UniRef50_B0W4X1 Putative uncharacterized protein n=1 Tax=Culex q... 51 1e-05 UniRef50_Q4Z464 Cold-shock protein, putative (Fragment) n=2 Tax=... 51 1e-05 UniRef50_C0CRT9 Putative uncharacterized protein n=1 Tax=Blautia... 51 1e-05 UniRef50_Q8I248 Cold-shock protein, putative n=2 Tax=Plasmodium ... 51 1e-05 UniRef50_Q6ZN17 Protein lin-28 homolog B n=13 Tax=Tetrapoda RepI... 51 1e-05 UniRef50_D0LBW3 Cold-shock protein DNA-binding protein n=2 Tax=C... 50 2e-05 UniRef50_C2E292 Cold-shock protein n=9 Tax=Lactobacillus RepID=C... 50 2e-05 UniRef50_B2IBA0 Cold-shock DNA-binding domain protein n=2 Tax=Rh... 50 2e-05 UniRef50_Q11SL0 Cold-shock DNA-binding protein family n=4 Tax=Ba... 50 2e-05 UniRef50_D2H5S2 Putative uncharacterized protein (Fragment) n=2 ... 50 2e-05 UniRef50_C4RFH3 DNA binding protein n=1 Tax=Micromonospora sp. A... 50 2e-05 UniRef50_A4A3Y7 Cold-shock domain family protein n=2 Tax=unclass... 50 3e-05 UniRef50_Q1ZUW9 Predicted membrane protein n=2 Tax=Photobacteriu... 50 3e-05 UniRef50_A0JVQ8 Putative cold-shock DNA-binding domain protein n... 50 3e-05 UniRef50_A3VSH0 Cold shock protein n=1 Tax=Parvularcula bermuden... 50 3e-05 UniRef50_Q0APJ7 Cold-shock DNA-binding protein family n=1 Tax=Ma... 50 3e-05 UniRef50_C7HUZ9 Conserved domain protein n=2 Tax=Anaerococcus Re... 50 3e-05 UniRef50_A1B0C7 Cold-shock DNA-binding protein family n=28 Tax=R... 49 4e-05 UniRef50_C6XG83 Cold shock protein n=1 Tax=Candidatus Liberibact... 49 4e-05 UniRef50_A3WZM6 Cold shock DNA binding protein n=1 Tax=Nitrobact... 49 6e-05 UniRef50_Q28PH1 Cold-shock DNA-binding protein family n=11 Tax=R... 49 7e-05 >UniRef50_P58726 Cold shock-like protein cspJ n=322 Tax=cellular organisms RepID=CSPJ_SALTI Length = 70 Score = 121 bits (304), Expect = 6e-27, Method: Compositional matrix adjust. Identities = 56/70 (80%), Positives = 63/70 (90%) Query: 1 MSNKMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQR 60 M+ K+TGLVKWFN +KGFGFITP DGSKDVFVHF+AIQSNEFRTLNENQ+VEFS EQG + Sbjct: 1 MTTKITGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNEFRTLNENQEVEFSAEQGPK 60 Query: 61 GPAAANVVTL 70 GP+A NVV L Sbjct: 61 GPSAVNVVAL 70 >UniRef50_P0A363 Cold shock-like protein cspB n=58 Tax=Enterobacteriaceae RepID=CSPB_YEREN Length = 70 Score = 119 bits (297), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 54/70 (77%), Positives = 63/70 (90%) Query: 1 MSNKMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQR 60 MSNKMTGLVKWF+A KGFGFI+P DGSKDVFVHF+AIQ N+++TL+E Q VEFSIEQGQ+ Sbjct: 1 MSNKMTGLVKWFDAGKGFGFISPADGSKDVFVHFSAIQGNDYKTLDEGQNVEFSIEQGQK 60 Query: 61 GPAAANVVTL 70 GP+A NVV L Sbjct: 61 GPSAVNVVAL 70 >UniRef50_P36995 Cold shock-like protein cspB n=24 Tax=Bacteria RepID=CSPB_ECOLI Length = 71 Score = 116 bits (290), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 54/68 (79%), Positives = 61/68 (89%) Query: 1 MSNKMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQR 60 MSNKMTGLVKWFNADKGFGFI+P DGSKDVFVHF+AIQ++ +RTL E QKV FSIE G + Sbjct: 1 MSNKMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAK 60 Query: 61 GPAAANVV 68 GPAAANV+ Sbjct: 61 GPAAANVI 68 >UniRef50_P0A974 Cold shock-like protein cspE n=233 Tax=Gammaproteobacteria RepID=CSPE_ECO57 Length = 69 Score = 101 bits (251), Expect = 7e-21, Method: Compositional matrix adjust. Identities = 46/68 (67%), Positives = 56/68 (82%) Query: 3 NKMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGP 62 +K+ G VKWFN KGFGFITP+DGSKDVFVHF+AIQ+N F+TL E Q+VEF I G +GP Sbjct: 2 SKIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGP 61 Query: 63 AAANVVTL 70 +AANV+ L Sbjct: 62 SAANVIAL 69 >UniRef50_P0A9Y8 Cold shock-like protein cspC n=125 Tax=Enterobacteriaceae RepID=CSPC_ECO57 Length = 69 Score = 99.4 bits (246), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 46/67 (68%), Positives = 52/67 (77%) Query: 4 KMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPA 63 K+ G VKWFN KGFGFITP DGSKDVFVHF+AIQ N F+TL E Q VEF I+ GQ+GPA Sbjct: 3 KIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPA 62 Query: 64 AANVVTL 70 A NV + Sbjct: 63 AVNVTAI 69 >UniRef50_A9IR63 Cold shock-like protein n=13 Tax=cellular organisms RepID=A9IR63_BORPD Length = 68 Score = 92.8 bits (229), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 37/62 (59%), Positives = 51/62 (82%) Query: 6 TGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPAAA 65 TG+VKWFNA+KG+GFITPDDGSKD+F H++ I S +++L ENQ+V F + QG +GP+A Sbjct: 3 TGIVKWFNAEKGYGFITPDDGSKDLFAHYSEISSEGYKSLQENQRVTFEVGQGPKGPSAK 62 Query: 66 NV 67 N+ Sbjct: 63 NI 64 >UniRef50_P62171 Cold shock-like protein cspC n=85 Tax=Bacteria RepID=CSPC_BACCR Length = 65 Score = 86.7 bits (213), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 42/66 (63%), Positives = 50/66 (75%), Gaps = 1/66 (1%) Query: 5 MTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPAA 64 M G VKWFNA+KGFGFI +DG DVFVHF+AIQ + +++L E Q+VEF I G RGP A Sbjct: 1 MQGRVKWFNAEKGFGFIEREDGD-DVFVHFSAIQQDGYKSLEEGQQVEFDIVDGARGPQA 59 Query: 65 ANVVTL 70 ANVV L Sbjct: 60 ANVVKL 65 >UniRef50_Q4KEW6 Cold shock protein capa n=14 Tax=Bacteria RepID=Q4KEW6_PSEF5 Length = 91 Score = 86.7 bits (213), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 40/67 (59%), Positives = 49/67 (73%) Query: 1 MSNKMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQR 60 MSN+ TG VKWFN +KGFGFITP G D+FVHF AI+S+ F++L E Q V F E+GQ+ Sbjct: 22 MSNRQTGTVKWFNDEKGFGFITPQGGGDDLFVHFKAIESDGFKSLKEGQTVSFVAEKGQK 81 Query: 61 GPAAANV 67 G AA V Sbjct: 82 GMQAAQV 88 >UniRef50_P54584 Cold shock protein n=9 Tax=Bacteria RepID=CSP_ARTGO Length = 67 Score = 86.7 bits (213), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 38/64 (59%), Positives = 48/64 (75%) Query: 7 GLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPAAAN 66 G VKWFNA+KGFGFITPDD DVFVH++ IQ+ F+TL+EN +V+F I QG +GP A Sbjct: 4 GTVKWFNAEKGFGFITPDDSDGDVFVHYSEIQTGGFKTLDENARVQFEIGQGAKGPQATG 63 Query: 67 VVTL 70 V + Sbjct: 64 VTLV 67 >UniRef50_B5Y9M2 Conserved domain protein n=20 Tax=Bacteria RepID=B5Y9M2_COPPD Length = 89 Score = 85.9 bits (211), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 39/63 (61%), Positives = 48/63 (76%) Query: 6 TGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPAAA 65 TG VKWF+A KG+GFIT DDG DVFVHF+AI+ N F++L++ KVEF I G +GP AA Sbjct: 25 TGTVKWFDAKKGYGFITRDDGEGDVFVHFSAIEGNGFKSLDQGDKVEFEIVNGPKGPQAA 84 Query: 66 NVV 68 VV Sbjct: 85 KVV 87 >UniRef50_O30875 Major cold shock protein n=98 Tax=cellular organisms RepID=CSPA_MICLC Length = 67 Score = 85.5 bits (210), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 39/65 (60%), Positives = 47/65 (72%) Query: 6 TGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPAAA 65 G VKWFNA+KG+GFI P+D S DVFVHF+AIQ N F+ L EN +VEF + G +G AA Sbjct: 3 VGTVKWFNAEKGYGFIAPEDNSADVFVHFSAIQGNGFKELQENDRVEFETQDGPKGLQAA 62 Query: 66 NVVTL 70 NV L Sbjct: 63 NVTKL 67 >UniRef50_P71478 Cold shock protein 1 n=20 Tax=Firmicutes RepID=CSP1_LACPL Length = 66 Score = 85.1 bits (209), Expect = 7e-16, Method: Compositional matrix adjust. Identities = 42/62 (67%), Positives = 49/62 (79%), Gaps = 1/62 (1%) Query: 7 GLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPAAAN 66 G VKWFNADKG+GFIT +DG+ DVFVHF+AIQ++ F+TL E QKV F E RGP AAN Sbjct: 4 GTVKWFNADKGYGFITGEDGN-DVFVHFSAIQTDGFKTLEEGQKVTFDEESSDRGPQAAN 62 Query: 67 VV 68 VV Sbjct: 63 VV 64 >UniRef50_Q7NT55 Cold shock transcription regulator protein n=1 Tax=Chromobacterium violaceum RepID=Q7NT55_CHRVO Length = 110 Score = 83.2 bits (204), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 39/66 (59%), Positives = 48/66 (72%), Gaps = 1/66 (1%) Query: 3 NKM-TGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRG 61 NKM TG VKWFN KGFGFITPD+G DVF HF+ I + FR+L ENQ+V F I +G +G Sbjct: 42 NKMATGTVKWFNDSKGFGFITPDEGGDDVFAHFSQINAKGFRSLAENQRVSFDIVEGPKG 101 Query: 62 PAAANV 67 A+N+ Sbjct: 102 KQASNI 107 >UniRef50_P0A356 Cold shock-like protein cspLA n=163 Tax=root RepID=CSPA_LISIN Length = 66 Score = 82.8 bits (203), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 39/61 (63%), Positives = 49/61 (80%), Gaps = 1/61 (1%) Query: 7 GLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPAAAN 66 G VKWFNA+KGFGFI ++G DVFVHF+AIQ + F++L+E Q V F +E+GQRGP AAN Sbjct: 4 GTVKWFNAEKGFGFIERENGD-DVFVHFSAIQGDGFKSLDEGQAVTFDVEEGQRGPQAAN 62 Query: 67 V 67 V Sbjct: 63 V 63 >UniRef50_Q81DK5 Cold shock-like protein cspE n=713 Tax=Bacteria RepID=CSPE_BACCR Length = 67 Score = 82.8 bits (203), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 39/66 (59%), Positives = 51/66 (77%), Gaps = 1/66 (1%) Query: 5 MTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPAA 64 +TG VKWFN++KGFGFI DG+ DVFVHF+AI + F++L+E Q+V F +E+G RGP A Sbjct: 3 LTGKVKWFNSEKGFGFIEVADGN-DVFVHFSAITGDGFKSLDEGQEVSFEVEEGNRGPQA 61 Query: 65 ANVVTL 70 NVV L Sbjct: 62 KNVVKL 67 >UniRef50_Q3AFQ5 Cold shock protein CspC n=14 Tax=Bacteria RepID=Q3AFQ5_CARHZ Length = 65 Score = 82.4 bits (202), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 40/66 (60%), Positives = 50/66 (75%), Gaps = 1/66 (1%) Query: 5 MTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPAA 64 M G VKWF+ KG+GFI +DG DVFVHF+AI+ N F+TL E Q+VEF+I +G RGP A Sbjct: 1 MQGKVKWFDPAKGYGFIEREDGG-DVFVHFSAIKGNGFKTLEEGQRVEFNIVEGTRGPQA 59 Query: 65 ANVVTL 70 A+VV L Sbjct: 60 ADVVKL 65 >UniRef50_A5BWB0 Putative uncharacterized protein n=1 Tax=Vitis vinifera RepID=A5BWB0_VITVI Length = 189 Score = 82.4 bits (202), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 37/68 (54%), Positives = 50/68 (73%) Query: 2 SNKMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRG 61 S + TG VKWF+ KGFGFI PDDG +D+FVH T+I+S+ FRTL+E + VEF+++ G+ G Sbjct: 4 SKRSTGTVKWFSGQKGFGFIAPDDGGEDLFVHQTSIRSDGFRTLSEGETVEFAVDHGEDG 63 Query: 62 PAAANVVT 69 A VT Sbjct: 64 RTKAVEVT 71 >UniRef50_C6VN45 Cold shock protein CspC n=8 Tax=Firmicutes RepID=C6VN45_LACPJ Length = 66 Score = 82.0 bits (201), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 39/61 (63%), Positives = 48/61 (78%), Gaps = 1/61 (1%) Query: 7 GLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPAAAN 66 G VKWFNADKGFGFIT ++GS DVFVHF+AIQ + F++L+E Q V F +E+ RGP A N Sbjct: 4 GTVKWFNADKGFGFITRENGS-DVFVHFSAIQEDGFKSLDEGQAVNFDVEESDRGPQAVN 62 Query: 67 V 67 V Sbjct: 63 V 63 >UniRef50_Q2LQ45 Cold shock protein n=49 Tax=Bacteria RepID=Q2LQ45_SYNAS Length = 90 Score = 82.0 bits (201), Expect = 6e-15, Method: Compositional matrix adjust. Identities = 38/61 (62%), Positives = 47/61 (77%), Gaps = 1/61 (1%) Query: 7 GLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPAAAN 66 G VKWFN KGFGFI D+G DVFVH++AIQS+ F+TL E Q+V F ++ GQ+GPAA N Sbjct: 28 GKVKWFNEQKGFGFIEKDEGG-DVFVHYSAIQSSGFKTLYEGQRVSFEVQTGQKGPAAVN 86 Query: 67 V 67 V Sbjct: 87 V 87 >UniRef50_C9KNJ1 Conserved domain protein n=1 Tax=Mitsuokella multacida DSM 20544 RepID=C9KNJ1_9FIRM Length = 66 Score = 81.3 bits (199), Expect = 8e-15, Method: Compositional matrix adjust. Identities = 39/64 (60%), Positives = 47/64 (73%), Gaps = 1/64 (1%) Query: 5 MTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPAA 64 M G VKWF+ +KG+GFI +G DVFVHF+AIQ F+TLNE Q VEF I +G RGP A Sbjct: 1 MVGKVKWFSPEKGYGFIA-REGGDDVFVHFSAIQDEGFKTLNEGQDVEFEIVEGARGPQA 59 Query: 65 ANVV 68 ANV+ Sbjct: 60 ANVI 63 >UniRef50_B5HGK4 Cold shock protein n=10 Tax=Streptomyces RepID=B5HGK4_STRPR Length = 67 Score = 81.3 bits (199), Expect = 9e-15, Method: Compositional matrix adjust. Identities = 37/63 (58%), Positives = 45/63 (71%) Query: 6 TGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPAAA 65 +G+VKWFNA+KGFGFI D G DVF H++ I + FR L E QKV F I QGQ+GP A Sbjct: 3 SGVVKWFNAEKGFGFIEQDGGGPDVFAHYSNIAAQGFRELLEGQKVNFDIAQGQKGPTAE 62 Query: 66 NVV 68 N+V Sbjct: 63 NIV 65 >UniRef50_A4G7K9 Cold shock protein CspD n=3 Tax=Bacteria RepID=A4G7K9_HERAR Length = 67 Score = 80.9 bits (198), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 36/62 (58%), Positives = 44/62 (70%) Query: 6 TGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPAAA 65 TG VKWFN KGFGFITPD G +D+F HF+AI F+TL E QKV F + QG +G A+ Sbjct: 3 TGTVKWFNDSKGFGFITPDSGGEDLFAHFSAITMEGFKTLKEGQKVSFEVTQGPKGKQAS 62 Query: 66 NV 67 N+ Sbjct: 63 NI 64 >UniRef50_Q03A67 Cold-shock DNA-binding protein family n=16 Tax=Firmicutes RepID=Q03A67_LACC3 Length = 66 Score = 80.9 bits (198), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 38/61 (62%), Positives = 46/61 (75%), Gaps = 1/61 (1%) Query: 7 GLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPAAAN 66 G VKWFNA+KG+GFIT +DGS DVFVHF+AIQ + ++TL E Q V F +E RGP A N Sbjct: 4 GTVKWFNAEKGYGFITREDGS-DVFVHFSAIQGDGYKTLEEGQAVTFEVEDSDRGPQAVN 62 Query: 67 V 67 V Sbjct: 63 V 63 >UniRef50_Q1LCU6 Cold-shock DNA-binding protein family n=7 Tax=Proteobacteria RepID=Q1LCU6_RALME Length = 126 Score = 80.5 bits (197), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 35/62 (56%), Positives = 43/62 (69%) Query: 6 TGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPAAA 65 TG VKWFN KGFGFITPD G D+F HF+ +Q N F++L E QKV + GQ+GPAA Sbjct: 62 TGTVKWFNDSKGFGFITPDAGGDDLFAHFSEVQGNGFKSLQEGQKVRYVAGVGQKGPAAT 121 Query: 66 NV 67 + Sbjct: 122 KI 123 >UniRef50_Q0JY13 Cold shock protein, DNA-binding n=2 Tax=Burkholderiaceae RepID=Q0JY13_RALEH Length = 98 Score = 80.5 bits (197), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 34/65 (52%), Positives = 48/65 (73%) Query: 6 TGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPAAA 65 TG+VKWFN KGFGFI PD G D+F HF+ I+++ F++L ENQ+V+F ++ G +G AA Sbjct: 20 TGIVKWFNDAKGFGFIKPDAGGDDLFAHFSEIRADGFKSLQENQRVQFEVKNGPKGLQAA 79 Query: 66 NVVTL 70 N+ L Sbjct: 80 NITPL 84 >UniRef50_Q1DBV4 Cold-shock protein CspA n=10 Tax=cellular organisms RepID=Q1DBV4_MYXXD Length = 68 Score = 80.5 bits (197), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 39/62 (62%), Positives = 43/62 (69%) Query: 6 TGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPAAA 65 TG VKWFN KGFGFI DDG DVF H TAIQ++ FRTL E QKVEF +G +G A Sbjct: 3 TGTVKWFNDAKGFGFIAQDDGGADVFCHHTAIQTDGFRTLAEGQKVEFETRKGPKGLQAE 62 Query: 66 NV 67 NV Sbjct: 63 NV 64 >UniRef50_C7Q9X4 Cold-shock DNA-binding domain protein n=31 Tax=Bacteria RepID=C7Q9X4_CATAD Length = 68 Score = 80.1 bits (196), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 35/62 (56%), Positives = 44/62 (70%) Query: 7 GLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPAAAN 66 G VKWFNA+KGFGFI D G DVF HF+ I ++ +R L E Q+V F + QGQ+GP A N Sbjct: 4 GTVKWFNAEKGFGFIEQDGGGADVFAHFSNIAADGYRELQEGQRVSFEVTQGQKGPQAVN 63 Query: 67 VV 68 +V Sbjct: 64 IV 65 >UniRef50_Q56922 Major cold shock protein (Fragment) n=404 Tax=Bacteria RepID=CSPA_YEREN Length = 46 Score = 80.1 bits (196), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 37/46 (80%), Positives = 42/46 (91%) Query: 15 DKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQR 60 DKGFGFITP DGSKDVFVHF+AIQSN+F+TL+E QKVEFSIE G + Sbjct: 1 DKGFGFITPADGSKDVFVHFSAIQSNDFKTLDEGQKVEFSIENGAK 46 >UniRef50_A5N624 CspA n=10 Tax=cellular organisms RepID=A5N624_CLOK5 Length = 67 Score = 79.7 bits (195), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 43/66 (65%), Positives = 49/66 (74%), Gaps = 2/66 (3%) Query: 6 TGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFR-TLNENQKVEFSIEQGQRGPAA 64 TG VKWFN++KGFGFI G DVFVHFTAIQSNE R L E QKV+F +E+G +G A Sbjct: 3 TGTVKWFNSEKGFGFIEV-PGENDVFVHFTAIQSNEARKNLEEGQKVQFDVEEGPKGLQA 61 Query: 65 ANVVTL 70 ANVV L Sbjct: 62 ANVVKL 67 >UniRef50_D1AYL8 Cold-shock DNA-binding domain protein n=3 Tax=cellular organisms RepID=D1AYL8_STRM9 Length = 65 Score = 79.7 bits (195), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 37/65 (56%), Positives = 48/65 (73%), Gaps = 1/65 (1%) Query: 5 MTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPAA 64 M G VKWFN KGFGFI+ +DG KD F+HF+ I F+T+NE ++VEF IE G++GP A Sbjct: 1 MLGKVKWFNEKKGFGFISGEDG-KDYFLHFSKINKGGFKTVNEGEEVEFDIEDGEKGPQA 59 Query: 65 ANVVT 69 NVV+ Sbjct: 60 TNVVS 64 >UniRef50_Q3IC55 Cold shock protein n=52 Tax=Bacteria RepID=Q3IC55_PSEHT Length = 68 Score = 79.7 bits (195), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 37/65 (56%), Positives = 48/65 (73%), Gaps = 1/65 (1%) Query: 6 TGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPAAA 65 TG VKWFN KGFGFI + G DVF HF+AI S+ F+TL E Q+V+F++ QGQ+GP A Sbjct: 5 TGSVKWFNEAKGFGFIEQESG-PDVFAHFSAITSDGFKTLAEGQRVQFTVTQGQKGPQAE 63 Query: 66 NVVTL 70 N+V + Sbjct: 64 NIVCI 68 >UniRef50_Q816H3 Cold shock-like protein cspD n=370 Tax=Bacteria RepID=CSPD_BACCR Length = 66 Score = 79.3 bits (194), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 39/62 (62%), Positives = 47/62 (75%), Gaps = 1/62 (1%) Query: 6 TGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPAAA 65 TG VKWFN++KGFGFI + G DVFVHF+AIQ + F+TL E Q+V F I +G RGP AA Sbjct: 3 TGKVKWFNSEKGFGFIEVE-GGDDVFVHFSAIQGDGFKTLEEGQEVSFEIVEGNRGPQAA 61 Query: 66 NV 67 NV Sbjct: 62 NV 63 >UniRef50_O54310 Cold shock-like protein n=7 Tax=Bacteria RepID=CSP_THEMA Length = 66 Score = 79.3 bits (194), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 36/63 (57%), Positives = 49/63 (77%), Gaps = 1/63 (1%) Query: 5 MTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPAA 64 M G VKWF++ KG+GFIT D+G DVFVH++AI+ F+TL E Q VEF I++G++GP A Sbjct: 1 MRGKVKWFDSKKGYGFITKDEGG-DVFVHWSAIEMEGFKTLKEGQVVEFEIQEGKKGPQA 59 Query: 65 ANV 67 A+V Sbjct: 60 AHV 62 >UniRef50_Q5HPE0 Cold shock protein cspA n=113 Tax=Bacteria RepID=CSPA_STAEQ Length = 66 Score = 79.0 bits (193), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 38/64 (59%), Positives = 46/64 (71%), Gaps = 1/64 (1%) Query: 7 GLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPAAAN 66 G VKWFNA+KGFGFI + G DVFVHF+AI +++L E Q VEF + +G RGP AAN Sbjct: 4 GTVKWFNAEKGFGFIEVE-GENDVFVHFSAINQEGYKSLEEGQSVEFEVVEGDRGPQAAN 62 Query: 67 VVTL 70 VV L Sbjct: 63 VVKL 66 >UniRef50_Q0BPU3 Cold shock protein n=2 Tax=Alphaproteobacteria RepID=Q0BPU3_GRABC Length = 100 Score = 79.0 bits (193), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 35/61 (57%), Positives = 43/61 (70%) Query: 5 MTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPAA 64 + G VKWFN KG+GFI P G KDVFVH +A+Q R+LNE Q+++F IEQ Q G AA Sbjct: 33 LHGTVKWFNPTKGYGFIAPSTGEKDVFVHISAVQRAGLRSLNEGQQLDFEIEQQQNGRAA 92 Query: 65 A 65 A Sbjct: 93 A 93 >UniRef50_D1IX09 Whole genome shotgun sequence of line PN40024, scaffold_38.assembly12x (Fragment) n=1 Tax=Vitis vinifera RepID=D1IX09_VITVI Length = 236 Score = 78.6 bits (192), Expect = 6e-14, Method: Composition-based stats. Identities = 36/67 (53%), Positives = 46/67 (68%) Query: 3 NKMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGP 62 +++TG VKWFN KGFGFITPDDG D+FVH ++I+S FR+L E + VEF +E G Sbjct: 2 SRVTGTVKWFNDQKGFGFITPDDGGDDLFVHQSSIRSEGFRSLGEGEAVEFVVESSDDGR 61 Query: 63 AAANVVT 69 A VT Sbjct: 62 TKAVDVT 68 >UniRef50_Q08VT0 Conserved domain protein n=3 Tax=Bacteria RepID=Q08VT0_STIAU Length = 100 Score = 78.6 bits (192), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 38/65 (58%), Positives = 44/65 (67%) Query: 3 NKMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGP 62 N TG VKWFN KGFGFIT D G +DVF H TAI + FRTL E QKV+F + +G +G Sbjct: 33 NMATGTVKWFNDAKGFGFITQDGGGEDVFCHHTAINMDGFRTLQEGQKVQFDVARGPKGL 92 Query: 63 AAANV 67 A NV Sbjct: 93 QAQNV 97 >UniRef50_Q2P2A6 Major cold shock protein n=21 Tax=Gammaproteobacteria RepID=Q2P2A6_XANOM Length = 69 Score = 78.2 bits (191), Expect = 7e-14, Method: Compositional matrix adjust. Identities = 39/67 (58%), Positives = 46/67 (68%), Gaps = 1/67 (1%) Query: 1 MSNKMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQR 60 MS +M G+VKWFN KGFGFITP+ G D+FVHF AIQ F++L E QKV F QGQ+ Sbjct: 1 MSERMNGIVKWFNDAKGFGFITPESGP-DLFVHFRAIQGTGFKSLQEGQKVTFVAVQGQK 59 Query: 61 GPAAANV 67 G A V Sbjct: 60 GMQADQV 66 >UniRef50_Q1J0P4 Cold-shock DNA-binding domain protein n=9 Tax=Bacteria RepID=Q1J0P4_DEIGD Length = 87 Score = 77.8 bits (190), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 39/66 (59%), Positives = 48/66 (72%), Gaps = 3/66 (4%) Query: 6 TGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQR--GPA 63 G VKWFNA+KG+GFI +GS+DVF HF+AIQ+ F+ LNE +VEF IE GQR GP Sbjct: 3 VGKVKWFNAEKGYGFIE-TEGSEDVFAHFSAIQAQGFKKLNEGDEVEFEIEPGQRGKGPQ 61 Query: 64 AANVVT 69 A N+V Sbjct: 62 ARNIVV 67 >UniRef50_P72192 Temperature acclimation protein B (Fragment) n=85 Tax=cellular organisms RepID=TAPB_PSEFR Length = 63 Score = 77.8 bits (190), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 38/64 (59%), Positives = 46/64 (71%), Gaps = 1/64 (1%) Query: 1 MSNKMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQR 60 MS + +G VKWFN +KGFGFITP+ G D+FVHF AIQ N F++L E QKV F QGQ+ Sbjct: 1 MSQRQSGTVKWFNDEKGFGFITPESGP-DLFVHFRAIQGNGFKSLKEGQKVTFIAVQGQK 59 Query: 61 GPAA 64 G A Sbjct: 60 GMQA 63 >UniRef50_C0QFU1 CspA n=4 Tax=cellular organisms RepID=C0QFU1_DESAH Length = 66 Score = 77.4 bits (189), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 37/64 (57%), Positives = 47/64 (73%), Gaps = 1/64 (1%) Query: 7 GLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPAAAN 66 G VKWFN KGFGFI ++G +DVFVH + I ++ F++LNE KV F IEQGQ+GPAA N Sbjct: 4 GTVKWFNDSKGFGFIEQENG-EDVFVHHSGINASGFKSLNEGDKVTFDIEQGQKGPAATN 62 Query: 67 VVTL 70 V + Sbjct: 63 VTVV 66 >UniRef50_A3BPB0 Putative uncharacterized protein n=4 Tax=Oryza sativa RepID=A3BPB0_ORYSJ Length = 238 Score = 77.0 bits (188), Expect = 2e-13, Method: Composition-based stats. Identities = 35/68 (51%), Positives = 49/68 (72%) Query: 2 SNKMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRG 61 S ++ G VKWF+A KGFGFITPDDG +D+FVH ++++S+ +R+LN+ VEFS+ G G Sbjct: 3 SERVKGTVKWFDATKGFGFITPDDGGEDLFVHQSSLKSDGYRSLNDGDVVEFSVGSGNDG 62 Query: 62 PAAANVVT 69 A VT Sbjct: 63 RTKAVNVT 70 >UniRef50_B9KKC8 Cold-shock DNA-binding protein family n=21 Tax=Rhodobacteraceae RepID=B9KKC8_RHOSK Length = 83 Score = 77.0 bits (188), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 32/65 (49%), Positives = 47/65 (72%) Query: 6 TGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPAAA 65 TG VKWFN+ KGFGFI PDDG KDVFVH +A++ + L++NQK+ + ++ G+ G ++A Sbjct: 18 TGTVKWFNSTKGFGFIAPDDGGKDVFVHISAVERAGLKGLSDNQKIGYELQSGRDGRSSA 77 Query: 66 NVVTL 70 + L Sbjct: 78 GDLRL 82 >UniRef50_O67327 Cold shock-like protein n=2 Tax=Bacteria RepID=CSP_AQUAE Length = 70 Score = 77.0 bits (188), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 36/64 (56%), Positives = 45/64 (70%) Query: 7 GLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPAAAN 66 G VKWF+ DKG+GFIT +D + DVFVHFT IQ F+TL + QKVEF + + +GP A N Sbjct: 5 GTVKWFSKDKGYGFITREDTNADVFVHFTDIQMEGFKTLQKGQKVEFDVVEDTKGPRAKN 64 Query: 67 VVTL 70 V L Sbjct: 65 VRVL 68 >UniRef50_B4U902 Cold-shock DNA-binding domain protein n=9 Tax=Bacteria RepID=B4U902_HYDS0 Length = 71 Score = 76.6 bits (187), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 36/68 (52%), Positives = 48/68 (70%), Gaps = 2/68 (2%) Query: 5 MTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNE--FRTLNENQKVEFSIEQGQRGP 62 +TG VKWF+ +KG+GF+T DD DVFVHF+AI N F+TL + Q+VEF ++Q +GP Sbjct: 3 ITGTVKWFSKEKGYGFLTRDDNQGDVFVHFSAIDPNRQGFKTLVQGQRVEFEVDQDSKGP 62 Query: 63 AAANVVTL 70 A NV L Sbjct: 63 RAKNVRVL 70 >UniRef50_Q01761 Cold shock-like protein 7.0 n=356 Tax=cellular organisms RepID=CSP7_STRCL Length = 66 Score = 76.6 bits (187), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 37/62 (59%), Positives = 44/62 (70%), Gaps = 1/62 (1%) Query: 6 TGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPAAA 65 TG VKWFNA+KGFGFI D G DVFVH++AI + FR+L ENQ V F + G+ GP A Sbjct: 3 TGTVKWFNAEKGFGFIAQDGGGPDVFVHYSAINATGFRSLEENQVVNFDVTHGE-GPQAE 61 Query: 66 NV 67 NV Sbjct: 62 NV 63 >UniRef50_C4WXL4 ACYPI009849 protein n=3 Tax=cellular organisms RepID=C4WXL4_ACYPI Length = 250 Score = 76.6 bits (187), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 34/63 (53%), Positives = 45/63 (71%), Gaps = 1/63 (1%) Query: 7 GLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPAAAN 66 G+ KWFN+ KGFGF+TPDDG KDVFVH I+ + FR+L EN+ VEF+ + +G A Sbjct: 73 GICKWFNSKKGFGFVTPDDGGKDVFVHQRVIKKDGFRSLRENEHVEFTCHESDKG-LEAT 131 Query: 67 VVT 69 +VT Sbjct: 132 LVT 134 >UniRef50_C5RTX4 Cold-shock DNA-binding domain protein n=13 Tax=cellular organisms RepID=C5RTX4_9THEO Length = 67 Score = 76.3 bits (186), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 34/63 (53%), Positives = 48/63 (76%), Gaps = 1/63 (1%) Query: 5 MTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPAA 64 + G VKWFNA+KG+GFI +DG+ DVFVH++AI+ + F+TL E QKVEF + + +GP A Sbjct: 2 VRGKVKWFNAEKGYGFIEREDGT-DVFVHYSAIEGDGFKTLEEGQKVEFEVVEATKGPQA 60 Query: 65 ANV 67 + V Sbjct: 61 SKV 63 >UniRef50_B0S1I2 Cold shock protein n=4 Tax=cellular organisms RepID=B0S1I2_FINM2 Length = 67 Score = 76.3 bits (186), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 39/65 (60%), Positives = 47/65 (72%), Gaps = 2/65 (3%) Query: 7 GLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSN-EFRTLNENQKVEFSIEQGQRGPAAA 65 G VKWFNA KGFGFI+ +D DVFVH+TAI+ N E+R L ENQ+VEF I +G +G A Sbjct: 4 GKVKWFNATKGFGFISTED-QGDVFVHYTAIEDNGEYRKLEENQEVEFEISEGPKGLQAC 62 Query: 66 NVVTL 70 NV L Sbjct: 63 NVKKL 67 >UniRef50_A3XD40 Cold shock family protein n=5 Tax=Rhodobacteraceae RepID=A3XD40_9RHOB Length = 120 Score = 75.9 bits (185), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 35/60 (58%), Positives = 43/60 (71%) Query: 6 TGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPAAA 65 TG VKWFN+ KGFGFI PD G+KDVFVH +A++ + L +NQKV F IE G+ G AA Sbjct: 55 TGTVKWFNSTKGFGFIAPDGGTKDVFVHISAVERSGLTGLADNQKVTFDIEPGRDGREAA 114 >UniRef50_B0KQL2 Cold-shock DNA-binding domain protein n=2 Tax=Gammaproteobacteria RepID=B0KQL2_PSEPG Length = 70 Score = 75.9 bits (185), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 36/67 (53%), Positives = 47/67 (70%), Gaps = 1/67 (1%) Query: 1 MSNKMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQR 60 M+ + G VKWFN +KG+GFITP+ G+ D+FVHF AI+ N F++L E QKV F QGQ+ Sbjct: 1 MAERQNGTVKWFNDEKGYGFITPESGA-DLFVHFRAIEGNGFKSLKEGQKVTFVAVQGQK 59 Query: 61 GPAAANV 67 G A V Sbjct: 60 GLQADQV 66 >UniRef50_A3Y9L0 Cold-shock DNA-binding domain protein n=2 Tax=Marinomonas RepID=A3Y9L0_9GAMM Length = 97 Score = 75.9 bits (185), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 39/68 (57%), Positives = 47/68 (69%), Gaps = 2/68 (2%) Query: 1 MSNKM-TGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQ 59 MS ++ +G+VKWFN +KGFGFI +G DVFVHF AI RTL E QKV F + QGQ Sbjct: 28 MSGQLVSGIVKWFNDEKGFGFI-EREGGPDVFVHFRAINGTGRRTLQEGQKVTFEVTQGQ 86 Query: 60 RGPAAANV 67 +GP A NV Sbjct: 87 KGPQAENV 94 >UniRef50_C1F531 Cold shock protein n=1 Tax=Acidobacterium capsulatum ATCC 51196 RepID=C1F531_ACIC5 Length = 87 Score = 75.5 bits (184), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 37/65 (56%), Positives = 47/65 (72%), Gaps = 1/65 (1%) Query: 4 KMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPA 63 K G+VKWFN KG+GFI G +DVFVHF+AIQ + ++TLNE + VEF +QG +G Sbjct: 21 KENGVVKWFNGAKGYGFIQRSTG-EDVFVHFSAIQDSGYKTLNEGEAVEFECQQGPKGLN 79 Query: 64 AANVV 68 AANVV Sbjct: 80 AANVV 84 >UniRef50_Q11GE9 Cold-shock DNA-binding protein family n=10 Tax=Alphaproteobacteria RepID=Q11GE9_MESSB Length = 70 Score = 75.1 bits (183), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 35/64 (54%), Positives = 48/64 (75%), Gaps = 2/64 (3%) Query: 6 TGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQ--RGPA 63 TG VK+FNA KGFGFITPD+G KDVFVH +A++++ R+L + QKV F +E + +GP Sbjct: 4 TGTVKFFNATKGFGFITPDNGQKDVFVHISAVEASGMRSLVDGQKVSFDVEPDRMGKGPK 63 Query: 64 AANV 67 A N+ Sbjct: 64 AVNL 67 >UniRef50_P95459 Major cold shock protein cspA n=33 Tax=cellular organisms RepID=CSPA_PSEAE Length = 69 Score = 75.1 bits (183), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 37/67 (55%), Positives = 46/67 (68%), Gaps = 1/67 (1%) Query: 1 MSNKMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQR 60 MSN+ G VKWFN KGFGFITP+ G+ D+FVHF +IQ F++L E QKV F + GQ+ Sbjct: 1 MSNRQNGTVKWFNDAKGFGFITPESGN-DLFVHFRSIQGTGFKSLQEGQKVSFVVVNGQK 59 Query: 61 GPAAANV 67 G A V Sbjct: 60 GLQADEV 66 >UniRef50_A1S709 Cold-shock DNA-binding protein family n=6 Tax=cellular organisms RepID=A1S709_SHEAM Length = 70 Score = 75.1 bits (183), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 38/65 (58%), Positives = 47/65 (72%), Gaps = 1/65 (1%) Query: 6 TGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPAAA 65 TG VKWFN +KGFGF++ D+ S DVFVH+ AI + RTL E QKV FS+ +GQ+G AA Sbjct: 7 TGTVKWFNDEKGFGFLSRDNDS-DVFVHYRAINTQGRRTLKEGQKVSFSLVEGQKGLLAA 65 Query: 66 NVVTL 70 NV L Sbjct: 66 NVTPL 70 >UniRef50_Q2NK56 Cold shock protein n=6 Tax=Bacteria RepID=Q2NK56_AYWBP Length = 74 Score = 75.1 bits (183), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 35/69 (50%), Positives = 50/69 (72%), Gaps = 3/69 (4%) Query: 4 KMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEF--RTLNENQKVEFSIEQGQRG 61 K G +WF+ DKG+GFI DG KD+FVH+++IQ+ F +TLNEN KVEF++++G RG Sbjct: 5 KEQGTCRWFSKDKGYGFIISADG-KDIFVHYSSIQTEVFGRKTLNENDKVEFTVKEGDRG 63 Query: 62 PAAANVVTL 70 A +VV + Sbjct: 64 AQAVDVVVV 72 >UniRef50_Q4FT63 Cold-shock DNA-binding protein family n=10 Tax=cellular organisms RepID=Q4FT63_PSYA2 Length = 71 Score = 74.7 bits (182), Expect = 8e-13, Method: Compositional matrix adjust. Identities = 35/67 (52%), Positives = 47/67 (70%), Gaps = 1/67 (1%) Query: 1 MSNKMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQR 60 MS + G+VKWFN KGFGFI D G +D+FVHF AIQ + +R+L + +KVEFS+ +G + Sbjct: 1 MSAREQGIVKWFNDSKGFGFIQRDSG-EDIFVHFRAIQGDGYRSLKDGEKVEFSVVEGDK 59 Query: 61 GPAAANV 67 G A V Sbjct: 60 GLQAEEV 66 >UniRef50_B7C7U1 Putative uncharacterized protein n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7C7U1_9FIRM Length = 90 Score = 74.7 bits (182), Expect = 9e-13, Method: Compositional matrix adjust. Identities = 35/65 (53%), Positives = 46/65 (70%), Gaps = 1/65 (1%) Query: 6 TGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPAAA 65 TG VKWFNA+KG+GFIT +DG KDVFVH+++I S F+TL E Q V + + + RG A Sbjct: 23 TGKVKWFNAEKGYGFITSEDG-KDVFVHYSSINSEGFKTLEEGQTVTYDVVESDRGQQAN 81 Query: 66 NVVTL 70 NV + Sbjct: 82 NVTVV 86 >UniRef50_Q88P68 Cold-shock domain family protein n=52 Tax=Bacteria RepID=Q88P68_PSEPK Length = 165 Score = 74.3 bits (181), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 35/67 (52%), Positives = 46/67 (68%), Gaps = 1/67 (1%) Query: 1 MSNKMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQR 60 M+ + G VKWFN +KG+GFITP+ G D+FVHF AI+ N F++L E Q+V F QGQ+ Sbjct: 97 MAERQKGTVKWFNDEKGYGFITPESGP-DLFVHFRAIEGNGFKSLKEGQQVTFEAVQGQK 155 Query: 61 GPAAANV 67 G A V Sbjct: 156 GMQADKV 162 >UniRef50_B9JZ17 Cold shock protein n=106 Tax=Alphaproteobacteria RepID=B9JZ17_AGRVS Length = 71 Score = 74.3 bits (181), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 35/64 (54%), Positives = 46/64 (71%), Gaps = 2/64 (3%) Query: 6 TGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQR--GPA 63 TG+VK+FN DKGFGFI PD+G D+FVH +A+Q++ L+ENQKV F E +R GP Sbjct: 4 TGIVKFFNNDKGFGFIKPDNGGADIFVHISAVQASGLNGLSENQKVSFDTEPDRRGKGPK 63 Query: 64 AANV 67 A N+ Sbjct: 64 AVNL 67 >UniRef50_Q2LY24 Cold shock protein n=11 Tax=Bacteria RepID=Q2LY24_SYNAS Length = 132 Score = 74.3 bits (181), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 38/70 (54%), Positives = 49/70 (70%), Gaps = 2/70 (2%) Query: 2 SNKMT-GLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQR 60 S KM+ G VKWFNA KGFGFI D+G+ DVFVHF+AI+ ++ L E +V F + +G + Sbjct: 64 SYKMSEGTVKWFNASKGFGFIAQDNGN-DVFVHFSAIKMEGYKALEEGARVRFDVVKGNK 122 Query: 61 GPAAANVVTL 70 GPAA NV L Sbjct: 123 GPAADNVELL 132 >UniRef50_A4VMZ2 Cold shock protein CspA n=2 Tax=Gammaproteobacteria RepID=A4VMZ2_PSEU5 Length = 136 Score = 73.9 bits (180), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 36/70 (51%), Positives = 49/70 (70%), Gaps = 1/70 (1%) Query: 1 MSNKMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQR 60 M+ + TG VKWFN KG+GFI +G+ DVFVH+ AI+ + R+L E Q+VEFS+ QGQ+ Sbjct: 68 MAERETGTVKWFNDAKGYGFIQRGNGA-DVFVHYRAIRGDGHRSLAEGQQVEFSVIQGQK 126 Query: 61 GPAAANVVTL 70 G A +V L Sbjct: 127 GLQAEDVAGL 136 >UniRef50_C9Y043 Cold shock-like protein cspD n=3 Tax=Enterobacteriaceae RepID=C9Y043_CROTZ Length = 99 Score = 73.9 bits (180), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 32/65 (49%), Positives = 43/65 (66%) Query: 6 TGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPAAA 65 TG VKWFN KGFGFI P+ G +D+F H++ IQ + +RTL Q V F + QG +G A+ Sbjct: 26 TGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQVVRFDVHQGPKGNHAS 85 Query: 66 NVVTL 70 +V L Sbjct: 86 VIVPL 90 >UniRef50_B8C1C4 Cold-shock DNA-binding domain-containing protein n=1 Tax=Thalassiosira pseudonana RepID=B8C1C4_THAPS Length = 136 Score = 73.9 bits (180), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 35/67 (52%), Positives = 46/67 (68%) Query: 3 NKMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGP 62 +K+ G VKWF+A KGFGF+ PDDGS +VFVH +AI +N FR+L + + VEF + Q G Sbjct: 40 DKIKGTVKWFDAKKGFGFLVPDDGSAEVFVHHSAIHANGFRSLGDGEVVEFEVMQEPNGK 99 Query: 63 AAANVVT 69 A VT Sbjct: 100 WKALNVT 106 >UniRef50_A1JMC2 Cold shock-like protein cspD (Cold shock-like protein) n=19 Tax=Bacteria RepID=A1JMC2_YERE8 Length = 85 Score = 73.9 bits (180), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 32/65 (49%), Positives = 43/65 (66%) Query: 6 TGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPAAA 65 TG VKWFN KGFGFI P+ G +D+F H++ IQ + +RTL Q V F + QG +G A+ Sbjct: 3 TGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQMVNFDVHQGPKGNHAS 62 Query: 66 NVVTL 70 +V L Sbjct: 63 LIVPL 67 >UniRef50_O65639 Glycine-rich protein n=10 Tax=cellular organisms RepID=O65639_ARATH Length = 299 Score = 73.6 bits (179), Expect = 2e-12, Method: Composition-based stats. Identities = 35/66 (53%), Positives = 44/66 (66%) Query: 4 KMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPA 63 + TG V WFNA KG+GFITPDDGS ++FVH ++I S +R+L VEF+I QG G Sbjct: 10 RSTGKVNWFNASKGYGFITPDDGSVELFVHQSSIVSEGYRSLTVGDAVEFAITQGSDGKT 69 Query: 64 AANVVT 69 A VT Sbjct: 70 KAVNVT 75 >UniRef50_C4FWF1 Putative uncharacterized protein n=1 Tax=Catonella morbi ATCC 51271 RepID=C4FWF1_9FIRM Length = 90 Score = 72.8 bits (177), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 35/66 (53%), Positives = 46/66 (69%), Gaps = 1/66 (1%) Query: 5 MTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPAA 64 + G VK+FN DKGFGFI DG DVFVHF+ IQ++ F+TLNE Q V + +++ RG A Sbjct: 26 LNGTVKFFNVDKGFGFIAGQDGV-DVFVHFSNIQADGFKTLNEGQTVSYDVQETSRGLQA 84 Query: 65 ANVVTL 70 NVV + Sbjct: 85 INVVAI 90 >UniRef50_P27484 Glycine-rich protein 2 n=5 Tax=Viridiplantae RepID=GRP2_NICSY Length = 214 Score = 72.8 bits (177), Expect = 3e-12, Method: Composition-based stats. Identities = 35/66 (53%), Positives = 44/66 (66%) Query: 4 KMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPA 63 + G VKWF+ KGFGFITPDDG +D+FVH + I+S FR+L E + VEF +E G G Sbjct: 8 RAKGTVKWFSDQKGFGFITPDDGGEDLFVHQSGIRSEGFRSLAEGETVEFEVESGGDGRT 67 Query: 64 AANVVT 69 A VT Sbjct: 68 KAVDVT 73 >UniRef50_A4TN10 Cold-shock DNA-binding protein family n=35 Tax=Enterobacteriaceae RepID=A4TN10_YERPP Length = 69 Score = 72.4 bits (176), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 35/70 (50%), Positives = 49/70 (70%), Gaps = 1/70 (1%) Query: 1 MSNKMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQR 60 M+ KM G VKWFN +G+GFI+P DG DV+V+ TAI + + ++LNE Q VEFS + Sbjct: 1 MTLKM-GRVKWFNQSEGYGFISPHDGGSDVYVNKTAIANTKNKSLNEGQDVEFSTYRSIH 59 Query: 61 GPAAANVVTL 70 GP+AA+V+ Sbjct: 60 GPSAADVIAF 69 >UniRef50_B3QZU5 Cold shock-like protein n=1 Tax=Candidatus Phytoplasma mali AT RepID=B3QZU5_PHYMT Length = 85 Score = 72.4 bits (176), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 31/69 (44%), Positives = 48/69 (69%), Gaps = 1/69 (1%) Query: 1 MSNKMTGLVKWFNADKGFGFITP-DDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQ 59 + K+ G+ +WFN DKGFGF+ D S+D+F H T I+ FR+L+E ++VEF++ QG+ Sbjct: 9 CTEKIKGVCRWFNKDKGFGFLQKLDSDSQDIFFHQTDIKCEGFRSLDEGEEVEFTLVQGE 68 Query: 60 RGPAAANVV 68 +GP A +V Sbjct: 69 KGPQAIEIV 77 >UniRef50_B4S1R6 Stress response protein CspD n=5 Tax=cellular organisms RepID=B4S1R6_ALTMD Length = 72 Score = 72.0 bits (175), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 30/62 (48%), Positives = 42/62 (67%) Query: 6 TGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPAAA 65 G VKWFN KGFGFI P+DG +D+F H++ IQ +R+L Q+V F ++QG +G A Sbjct: 3 VGKVKWFNNAKGFGFIVPEDGGEDIFAHYSTIQMEGYRSLKAGQEVTFEVQQGPKGLHAE 62 Query: 66 NV 67 N+ Sbjct: 63 NI 64 >UniRef50_D1H869 Whole genome shotgun sequence of line PN40024, scaffold_23.assembly12x (Fragment) n=1 Tax=Vitis vinifera RepID=D1H869_VITVI Length = 208 Score = 72.0 bits (175), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 33/67 (49%), Positives = 48/67 (71%) Query: 3 NKMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGP 62 + TG+V+WF+ KGFGFITP++G +D+FVH ++I+S+ FR+L E + VEF I G+ G Sbjct: 4 ERSTGVVRWFSDQKGFGFITPNEGGEDLFVHQSSIKSDGFRSLGEGETVEFQIVLGEDGR 63 Query: 63 AAANVVT 69 A VT Sbjct: 64 TKAVDVT 70 >UniRef50_P0A970 Cold shock-like protein cspD n=101 Tax=Gammaproteobacteria RepID=CSPD_ECO57 Length = 74 Score = 72.0 bits (175), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 30/64 (46%), Positives = 43/64 (67%) Query: 7 GLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPAAAN 66 G VKWFN KGFGFI P+ G +D+F H++ IQ + +RTL Q V+F + QG +G A+ Sbjct: 4 GTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNHASV 63 Query: 67 VVTL 70 +V + Sbjct: 64 IVPV 67 >UniRef50_Q5CVY2 Cold shock RNA binding domain of the OB fold (Fragment) n=2 Tax=Cryptosporidium RepID=Q5CVY2_CRYPV Length = 135 Score = 71.6 bits (174), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 29/57 (50%), Positives = 44/57 (77%) Query: 5 MTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRG 61 ++G+ KWF++ KGFGFITPDDGS+D+FVH I+ FR+L ++++VE+ IE +G Sbjct: 11 LSGVCKWFDSTKGFGFITPDDGSEDIFVHQQNIKVEGFRSLAQDERVEYEIETDDKG 67 >UniRef50_A5VRM7 Cold-shock family protein n=37 Tax=Brucellaceae RepID=A5VRM7_BRUO2 Length = 105 Score = 71.6 bits (174), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 32/55 (58%), Positives = 37/55 (67%) Query: 6 TGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQR 60 TG VKWFN KGFGFI PD G DVFVH +A+Q TL+E QKV + I Q +R Sbjct: 44 TGTVKWFNTTKGFGFIQPDQGGTDVFVHISAVQRAGLTTLDEGQKVSYEIVQDRR 98 >UniRef50_A5VRP5 Cold-shock family protein n=37 Tax=Brucellaceae RepID=A5VRP5_BRUO2 Length = 83 Score = 71.6 bits (174), Expect = 8e-12, Method: Compositional matrix adjust. Identities = 33/65 (50%), Positives = 44/65 (67%), Gaps = 2/65 (3%) Query: 6 TGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQR--GPA 63 TG VK+FN +KGFGFI PDDG D+FVH +A+Q++ L +NQKV + E +R GP Sbjct: 16 TGQVKFFNTEKGFGFIKPDDGGADIFVHISAVQASGLPGLADNQKVSYETEPDRRGKGPK 75 Query: 64 AANVV 68 A N+ Sbjct: 76 AVNIT 80 >UniRef50_A4RZ32 Predicted protein n=1 Tax=Ostreococcus lucimarinus CCE9901 RepID=A4RZ32_OSTLU Length = 106 Score = 71.2 bits (173), Expect = 8e-12, Method: Compositional matrix adjust. Identities = 32/68 (47%), Positives = 44/68 (64%) Query: 1 MSNKMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQR 60 M+ + G VKWFNA KGFGFI P DGS+++FVH T I FR++ E ++VE+ ++ Sbjct: 1 MATRARGKVKWFNATKGFGFIIPHDGSEEIFVHQTGISCAGFRSVWEGEEVEYDVDDTDF 60 Query: 61 GPAAANVV 68 P A NV Sbjct: 61 APKAVNVT 68 >UniRef50_C4Z3Q0 Cold shock protein (Beta-ribbon, CspA family) n=10 Tax=Bacteria RepID=C4Z3Q0_EUBE2 Length = 84 Score = 71.2 bits (173), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 32/67 (47%), Positives = 45/67 (67%), Gaps = 1/67 (1%) Query: 4 KMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPA 63 +M G VKWFN KG+GFI+ D+ KDVFVH++ + F++L E +VEF + +G +GP Sbjct: 19 EMKGTVKWFNNQKGYGFIS-DESGKDVFVHYSGLNMEGFKSLEEGAQVEFDVTEGAKGPQ 77 Query: 64 AANVVTL 70 A NV L Sbjct: 78 ATNVTKL 84 >UniRef50_C8P136 Conserved domain protein n=6 Tax=Bacteria RepID=C8P136_ERYRH Length = 66 Score = 71.2 bits (173), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 33/62 (53%), Positives = 48/62 (77%), Gaps = 1/62 (1%) Query: 6 TGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPAAA 65 TG VK+FNA+KG+GFIT + G +D+FVH++AI ++ ++TL E Q+V F + +G RG AA Sbjct: 3 TGKVKFFNAEKGYGFITIE-GGQDIFVHYSAIVADGYKTLEEGQEVSFEVVEGPRGEQAA 61 Query: 66 NV 67 NV Sbjct: 62 NV 63 >UniRef50_D0KX28 Cold-shock DNA-binding domain protein n=1 Tax=Halothiobacillus neapolitanus c2 RepID=D0KX28_HALNC Length = 143 Score = 70.9 bits (172), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 35/67 (52%), Positives = 44/67 (65%), Gaps = 1/67 (1%) Query: 4 KMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPA 63 + G VKWFN DKGFGFI ++G +D+FVHF A+ L E QKVE+ I QG++GP Sbjct: 77 REVGHVKWFNTDKGFGFIVRENG-EDLFVHFRAVGDGSTLQLVEGQKVEYHIGQGRKGPQ 135 Query: 64 AANVVTL 70 A VV L Sbjct: 136 AEQVVIL 142 >UniRef50_B4RGZ9 Cold-shock DNA-binding domain protein n=75 Tax=Bacteria RepID=B4RGZ9_PHEZH Length = 250 Score = 70.9 bits (172), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 33/71 (46%), Positives = 44/71 (61%), Gaps = 1/71 (1%) Query: 1 MSNKMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQR 60 + +G VKWFN KGFGFI PDDG +DVFVH +A+ LNE +VE+ +EQ +R Sbjct: 53 LRRMASGTVKWFNTAKGFGFIQPDDGGQDVFVHISAVAQAGLDALNEGDQVEYELEQDRR 112 Query: 61 -GPAAANVVTL 70 G AA + + Sbjct: 113 SGKLAATSIVV 123 Score = 68.2 bits (165), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 28/55 (50%), Positives = 39/55 (70%) Query: 6 TGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQR 60 +G+VKWFN KGFGFI P+ G +D+FVH +A++ LNE Q V+F +EQ +R Sbjct: 183 SGVVKWFNPTKGFGFIKPEGGGQDIFVHISAVEQAGLSGLNEGQTVDFDLEQDRR 237 >UniRef50_A2SIM9 Cold-shock DNA-binding protein family n=16 Tax=Proteobacteria RepID=A2SIM9_METPP Length = 89 Score = 70.5 bits (171), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 32/66 (48%), Positives = 42/66 (63%) Query: 5 MTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPAA 64 + G VKWFN KGFGFI P+ G +DVF HF+AI + FRTL + +V F + G +G A Sbjct: 2 VNGTVKWFNDAKGFGFIEPEGGGEDVFAHFSAILMDGFRTLKQGARVSFELVDGPKGKLA 61 Query: 65 ANVVTL 70 N+ L Sbjct: 62 QNIAPL 67 >UniRef50_Q30QF0 Cold-shock DNA-binding protein family n=12 Tax=Proteobacteria RepID=Q30QF0_SULDN Length = 72 Score = 70.5 bits (171), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 35/72 (48%), Positives = 49/72 (68%), Gaps = 2/72 (2%) Query: 1 MSNKMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAI-QSNEFR-TLNENQKVEFSIEQG 58 M+ + G VKWFN +KG+GFI ++G KDVFVHF + ++ R +L+E QKV F + +G Sbjct: 1 MAELLDGSVKWFNEEKGYGFIQQENGGKDVFVHFRQVNRTGPGRVSLSEGQKVTFELGEG 60 Query: 59 QRGPAAANVVTL 70 Q+GP A NV L Sbjct: 61 QKGPQAENVTPL 72 >UniRef50_P55390 Probable cold shock protein y4cH n=110 Tax=Proteobacteria RepID=Y4CH_RHISN Length = 69 Score = 70.1 bits (170), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 29/50 (58%), Positives = 36/50 (72%) Query: 6 TGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSI 55 TG VKWFNA KGFGFI PDDGS DVFVH +A++ R L + QK+ + + Sbjct: 4 TGTVKWFNATKGFGFIQPDDGSADVFVHISAVERAGLRELKDGQKISYEL 53 >UniRef50_B3PL56 Cold-shock protein CspD n=34 Tax=Bacteria RepID=B3PL56_CELJU Length = 125 Score = 69.7 bits (169), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 30/63 (47%), Positives = 43/63 (68%) Query: 6 TGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPAAA 65 TG VKWFN KG+GFI D+G +D+F H++AI + ++TL Q+V F I +G +G A Sbjct: 44 TGTVKWFNNAKGYGFILADEGGEDLFAHYSAISMDGYKTLKAGQQVSFEITRGDKGLHAI 103 Query: 66 NVV 68 N+V Sbjct: 104 NIV 106 >UniRef50_A4XHY2 Cold-shock DNA-binding protein family n=3 Tax=cellular organisms RepID=A4XHY2_CALS8 Length = 66 Score = 69.3 bits (168), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 33/63 (52%), Positives = 44/63 (69%), Gaps = 1/63 (1%) Query: 5 MTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPAA 64 M G VKWFN +KG+GFI+ ++G DVFVHF+AI ++TL E Q VEF + + +RG A Sbjct: 1 MRGRVKWFNPEKGYGFISTENGD-DVFVHFSAINMEGYKTLAEGQMVEFDVVKSERGNQA 59 Query: 65 ANV 67 NV Sbjct: 60 VNV 62 >UniRef50_B3RZU4 Putative uncharacterized protein n=1 Tax=Trichoplax adhaerens RepID=B3RZU4_TRIAD Length = 279 Score = 69.3 bits (168), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 34/71 (47%), Positives = 48/71 (67%), Gaps = 4/71 (5%) Query: 1 MSNKMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNE----FRTLNENQKVEFSIE 56 ++NK++G VKWFN +G+GFI DD +DVFVH TAIQ+N R++ + + VEF + Sbjct: 25 VANKVSGKVKWFNVKRGYGFIHRDDTGEDVFVHQTAIQANNPKKYLRSVGDEEVVEFDVL 84 Query: 57 QGQRGPAAANV 67 G +G AANV Sbjct: 85 SGPKGLEAANV 95 >UniRef50_Q9VRN5 Protein lin-28 homolog n=1 Tax=Drosophila melanogaster RepID=LIN28_DROME Length = 195 Score = 69.3 bits (168), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 30/63 (47%), Positives = 43/63 (68%) Query: 7 GLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPAAAN 66 G KWFN KG+GF+TP+DG ++VFVH + IQ + FR+L E ++VEF ++ RG A Sbjct: 41 GKCKWFNVAKGWGFLTPNDGGQEVFVHQSVIQMSGFRSLGEQEEVEFECQRTSRGLEATR 100 Query: 67 VVT 69 V + Sbjct: 101 VSS 103 >UniRef50_B3EP04 Cold-shock DNA-binding domain protein n=13 Tax=Chlorobiaceae RepID=B3EP04_CHLPB Length = 96 Score = 69.3 bits (168), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 32/63 (50%), Positives = 45/63 (71%), Gaps = 1/63 (1%) Query: 9 VKWFNADKGFGFITPDDGSKDVFVHFTAIQSNE-FRTLNENQKVEFSIEQGQRGPAAANV 67 VKWF+ KG+GFI DG +D+FVHF+AI S + F+ LN++ +VEF I+Q Q+G A NV Sbjct: 7 VKWFDGKKGYGFIVNPDGGEDIFVHFSAIVSEQSFKVLNQDAEVEFEIDQTQKGMQAKNV 66 Query: 68 VTL 70 + Sbjct: 67 CEI 69 >UniRef50_B0T8T3 Cold-shock DNA-binding domain protein n=40 Tax=Bacteria RepID=B0T8T3_CAUSK Length = 179 Score = 68.9 bits (167), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 28/53 (52%), Positives = 39/53 (73%) Query: 8 LVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQR 60 +VKWFN+ KGFGFI PD+G D+FVH +A++ R LNE Q+V + +EQ +R Sbjct: 115 VVKWFNSTKGFGFIQPDNGGGDIFVHISAVERAGLRGLNEGQQVGYELEQDRR 167 Score = 65.9 bits (159), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 27/54 (50%), Positives = 38/54 (70%) Query: 7 GLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQR 60 G+VKWFN KGFGFI P+DG +DVFVH A++ + LNE +V + +E+ +R Sbjct: 4 GVVKWFNPAKGFGFIQPEDGGQDVFVHIAAVERSGLSGLNEGDQVTYEMEEDRR 57 >UniRef50_Q0SKK0 Cold shock protein n=1 Tax=Rhodococcus jostii RHA1 RepID=Q0SKK0_RHOSR Length = 119 Score = 68.6 bits (166), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 29/62 (46%), Positives = 42/62 (67%) Query: 6 TGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPAAA 65 TG V+WFNA++GFGF+ P DGS D+FVH + I + R L E Q+V F++ + + G A Sbjct: 55 TGTVRWFNAEQGFGFLAPADGSDDIFVHVSEIAGDGHRILEEGQRVSFAVCRTETGDQAR 114 Query: 66 NV 67 +V Sbjct: 115 DV 116 >UniRef50_A4VLV8 Cold-shock protein CspD n=5 Tax=Gammaproteobacteria RepID=A4VLV8_PSEU5 Length = 93 Score = 68.6 bits (166), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 30/63 (47%), Positives = 42/63 (66%) Query: 5 MTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPAA 64 ++G VKWFN KG+GFI D G +D+F H++AIQ +RTL Q V F+I QG +G A Sbjct: 8 LSGKVKWFNNAKGYGFIVADGGDEDLFAHYSAIQMEGYRTLKAGQAVMFNILQGPKGLHA 67 Query: 65 ANV 67 ++ Sbjct: 68 TDI 70 >UniRef50_A4VNB0 Cold-shock DNA-binding protein n=75 Tax=Bacteria RepID=A4VNB0_PSEU5 Length = 243 Score = 68.2 bits (165), Expect = 7e-11, Method: Composition-based stats. Identities = 34/67 (50%), Positives = 42/67 (62%), Gaps = 1/67 (1%) Query: 2 SNKMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRG 61 + + G VKWFN KGFGFI+ D G DVFVHF AI+ R L E Q+VEF+I +G Sbjct: 172 AGREAGTVKWFNTSKGFGFISRDSGD-DVFVHFRAIRGEGHRILVEGQRVEFTIMMRDKG 230 Query: 62 PAAANVV 68 A +VV Sbjct: 231 LQAEDVV 237 >UniRef50_Q9RBP7 Cold shock protein 7.4 (Fragment) n=2 Tax=Rhodococcus RepID=Q9RBP7_9NOCA Length = 57 Score = 68.2 bits (165), Expect = 8e-11, Method: Compositional matrix adjust. Identities = 27/57 (47%), Positives = 41/57 (71%) Query: 8 LVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPAA 64 + +W+NA+KGFG +TPDDGSKD FVHFTA++S + +++ +K + +GPAA Sbjct: 1 IARWYNAEKGFGCLTPDDGSKDCFVHFTALRSERWLSISGRRKHRKRLNTPAKGPAA 57 >UniRef50_A8I8L3 Cold-shock DNA-binding domain n=1 Tax=Azorhizobium caulinodans ORS 571 RepID=A8I8L3_AZOC5 Length = 117 Score = 67.8 bits (164), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 32/66 (48%), Positives = 43/66 (65%), Gaps = 1/66 (1%) Query: 6 TGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQR-GPAA 64 TG VKWFN +KGFGFI PDDG D FVH +A++ L E QKV + + +R G ++ Sbjct: 50 TGTVKWFNPEKGFGFIAPDDGGADAFVHISAVERAGLPPLREGQKVNYDLVADKRSGKSS 109 Query: 65 ANVVTL 70 A+ +TL Sbjct: 110 ASNLTL 115 >UniRef50_Q9Z3S6 Cold shock protein cspA n=72 Tax=Bacteria RepID=CSPA_RHIME Length = 69 Score = 67.4 bits (163), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 29/50 (58%), Positives = 37/50 (74%) Query: 6 TGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSI 55 +G VKWFN+ KGFGFI PDDG+ DVFVH +A++ R+L E QKV + I Sbjct: 3 SGTVKWFNSTKGFGFIQPDDGATDVFVHASAVERAGMRSLVEGQKVTYDI 52 >UniRef50_D0MDE8 Cold-shock DNA-binding domain protein n=1 Tax=Rhodothermus marinus DSM 4252 RepID=D0MDE8_RHOM4 Length = 95 Score = 67.4 bits (163), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 32/65 (49%), Positives = 43/65 (66%), Gaps = 1/65 (1%) Query: 7 GLVKWFNADKGFGFITPDDGSKDVFVHFTAIQS-NEFRTLNENQKVEFSIEQGQRGPAAA 65 G+VKWF+A KG+GFI +G D+FVH++ I S F+TL Q VEF + +G +G A Sbjct: 6 GVVKWFDAKKGYGFIIHPEGGADIFVHYSQIISERRFKTLRTGQIVEFELHEGPKGLHAR 65 Query: 66 NVVTL 70 NVV L Sbjct: 66 NVVPL 70 >UniRef50_A8QHS7 'Cold-shock' DNA-binding domain containing protein n=4 Tax=cellular organisms RepID=A8QHS7_BRUMA Length = 290 Score = 67.4 bits (163), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 32/68 (47%), Positives = 42/68 (61%), Gaps = 4/68 (5%) Query: 5 MTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNE----FRTLNENQKVEFSIEQGQR 60 + G VKWFN G+GFI D D+FVH TA+ N R+L + +KVEF + +GQ+ Sbjct: 58 IQGTVKWFNVKNGYGFINRADTGDDIFVHQTAVTKNNPNKYLRSLGDGEKVEFDVVEGQK 117 Query: 61 GPAAANVV 68 GP AANV Sbjct: 118 GPEAANVT 125 >UniRef50_Q38896 Glycine-rich protein 2b n=125 Tax=cellular organisms RepID=GRP2B_ARATH Length = 201 Score = 67.0 bits (162), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 28/54 (51%), Positives = 38/54 (70%) Query: 3 NKMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIE 56 ++ G VKWF+ KGFGFITP DG D+FVH ++I+S FR+L + VEF +E Sbjct: 13 DRRKGTVKWFDTQKGFGFITPSDGGDDLFVHQSSIRSEGFRSLAAEESVEFDVE 66 >UniRef50_UPI000155BE86 PREDICTED: hypothetical protein, partial n=1 Tax=Ornithorhynchus anatinus RepID=UPI000155BE86 Length = 223 Score = 66.6 bits (161), Expect = 2e-10, Method: Composition-based stats. Identities = 31/71 (43%), Positives = 46/71 (64%), Gaps = 4/71 (5%) Query: 1 MSNKMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNE----FRTLNENQKVEFSIE 56 ++ K+ G VKWFN G+GFI +D +DVFVH TAI+ N R++ + + VEF + Sbjct: 56 VATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDVV 115 Query: 57 QGQRGPAAANV 67 +G++G AANV Sbjct: 116 EGEKGAEAANV 126 >UniRef50_B5A4M3 Glycine-rich nucleic acid binding protein n=1 Tax=Gymnochlora stellata RepID=B5A4M3_GYMST Length = 290 Score = 66.6 bits (161), Expect = 2e-10, Method: Composition-based stats. Identities = 31/69 (44%), Positives = 44/69 (63%) Query: 1 MSNKMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQR 60 + ++ +G KWFN KG+GFI P +G D+FVH TAI++ FR+L E ++VEF +E Sbjct: 20 LPDRQSGTCKWFNTVKGYGFILPQEGKDDIFVHQTAIKAVGFRSLAEGEQVEFDVEVDAT 79 Query: 61 GPAAANVVT 69 G A VT Sbjct: 80 GRKKARNVT 88 >UniRef50_D1C6U7 Cold-shock DNA-binding domain protein n=1 Tax=Sphaerobacter thermophilus DSM 20745 RepID=D1C6U7_SPHTD Length = 77 Score = 66.6 bits (161), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 30/62 (48%), Positives = 41/62 (66%), Gaps = 3/62 (4%) Query: 6 TGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPAAA 65 TG VKW++ +KG+GFI DDG D+FVH +AI +E LNE +VEF + +GP A Sbjct: 3 TGTVKWYDPEKGYGFIARDDGDSDLFVHRSAISGSE---LNEGDRVEFDVTSSPKGPRAE 59 Query: 66 NV 67 +V Sbjct: 60 HV 61 >UniRef50_B1MZK9 Cold shock protein n=15 Tax=Bacteria RepID=B1MZK9_LEUCK Length = 74 Score = 66.6 bits (161), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 28/62 (45%), Positives = 41/62 (66%) Query: 6 TGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPAAA 65 TG+VK + ++G+G+ITPD G +DVFVHF I F+ L + +KV + + QG + P AA Sbjct: 3 TGIVKIWQKERGYGYITPDAGGEDVFVHFNGIDMPGFKALKQGEKVSYVLVQGYKAPQAA 62 Query: 66 NV 67 V Sbjct: 63 QV 64 >UniRef50_B1Z823 Cold-shock DNA-binding domain protein n=34 Tax=Alphaproteobacteria RepID=B1Z823_METPB Length = 69 Score = 66.6 bits (161), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 31/64 (48%), Positives = 41/64 (64%), Gaps = 2/64 (3%) Query: 6 TGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRG--PA 63 TG VKWFN KG+GFI PD+G KDVFVH +A++ R L E QK+ + + +R A Sbjct: 3 TGTVKWFNETKGYGFIQPDNGGKDVFVHISAVERAGLRNLVEGQKISYEVLTDKRSGKDA 62 Query: 64 AANV 67 A N+ Sbjct: 63 AGNL 66 >UniRef50_B6QZ94 Cold-shock DNA-binding domain protein n=1 Tax=Pseudovibrio sp. JE062 RepID=B6QZ94_9RHOB Length = 215 Score = 66.6 bits (161), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 28/58 (48%), Positives = 40/58 (68%) Query: 4 KMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRG 61 + +G VK+F DKGFGFITPD+G DVFVH +A++ + TL+ Q++ F E +RG Sbjct: 121 RQSGTVKFFKLDKGFGFITPDEGENDVFVHISAVERSGLTTLDSGQRISFETEPDRRG 178 >UniRef50_Q1GT29 Cold-shock DNA-binding protein family n=1 Tax=Sphingopyxis alaskensis RepID=Q1GT29_SPHAL Length = 90 Score = 65.9 bits (159), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 30/59 (50%), Positives = 41/59 (69%) Query: 7 GLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPAAA 65 G VK+FN DKG+GFI +DGS D FVH TA+Q+ TLN+ Q+V + +E G+ G +A Sbjct: 26 GTVKFFNNDKGYGFIENEDGSGDSFVHITAVQAAGMDTLNKEQRVSYELETGKNGKVSA 84 >UniRef50_P41824 Y-box factor homolog n=1 Tax=Aplysia californica RepID=YBOXH_APLCA Length = 253 Score = 65.9 bits (159), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 32/72 (44%), Positives = 48/72 (66%), Gaps = 4/72 (5%) Query: 1 MSNKMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNE----FRTLNENQKVEFSIE 56 ++++++G VKWFN G+GFI DD +DVFVH TAI N R++ + +KVEF + Sbjct: 29 IASQVSGTVKWFNVKSGYGFINRDDTKEDVFVHQTAIVKNNPRKYLRSVGDGEKVEFDVV 88 Query: 57 QGQRGPAAANVV 68 +G++G AANV Sbjct: 89 EGEKGNEAANVT 100 >UniRef50_B5AU39 Y-box protein Lyb1 n=1 Tax=Lethenteron japonicum RepID=B5AU39_LAMJA Length = 331 Score = 65.5 bits (158), Expect = 5e-10, Method: Composition-based stats. Identities = 31/71 (43%), Positives = 46/71 (64%), Gaps = 4/71 (5%) Query: 1 MSNKMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNE----FRTLNENQKVEFSIE 56 ++ K+ G VKWFN G+GFI +D +DVFVH TAI+ N R++ + + VEF + Sbjct: 21 IATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGEVVEFDVV 80 Query: 57 QGQRGPAAANV 67 +G++G AANV Sbjct: 81 EGEKGAEAANV 91 >UniRef50_A9W6T1 Cold-shock protein DNA-binding n=32 Tax=Bacteria RepID=A9W6T1_METEP Length = 281 Score = 65.5 bits (158), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 29/67 (43%), Positives = 45/67 (67%) Query: 2 SNKMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRG 61 S +MTG VKW++ KGFGF++ +DG KDVFVH +A+ +L E Q+V + +GQ+G Sbjct: 212 SVEMTGTVKWYDPAKGFGFVSVNDGGKDVFVHRSALSRAGLDSLAEGQQVTLGVVEGQKG 271 Query: 62 PAAANVV 68 A+++ Sbjct: 272 REASSIT 278 Score = 52.8 bits (125), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 24/59 (40%), Positives = 33/59 (55%) Query: 9 VKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPAAANV 67 VKWFN +KGFGF+ DGS D F+H A+++ L ++ QGQ+GP V Sbjct: 82 VKWFNKEKGFGFVELGDGSGDAFLHIRAVEAAGHDDLLPGTRLTVQTAQGQKGPQVTAV 140 >UniRef50_Q2RNN9 Cold-shock DNA-binding protein family n=2 Tax=Rhodospirillum RepID=Q2RNN9_RHORT Length = 210 Score = 65.5 bits (158), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 28/65 (43%), Positives = 42/65 (64%) Query: 3 NKMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGP 62 ++ G+VK+F+ADKGFGF+ PD G KDV+V +Q L + Q+V SI G++GP Sbjct: 143 TEIDGVVKFFSADKGFGFVVPDGGGKDVYVGSRTLQDCGVSVLEQGQRVRMSIRMGKKGP 202 Query: 63 AAANV 67 A ++ Sbjct: 203 MAGSL 207 Score = 54.7 bits (130), Expect = 8e-07, Method: Compositional matrix adjust. Identities = 24/61 (39%), Positives = 34/61 (55%) Query: 1 MSNKMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQR 60 M ++ T VKWFNA KGFGF+ DG D F+H + +Q + L E + + GQ+ Sbjct: 1 MLSRSTATVKWFNATKGFGFVRVSDGEPDAFLHISVLQRAGYSELPEGATIVCDLAPGQK 60 Query: 61 G 61 G Sbjct: 61 G 61 >UniRef50_Q5JKD6 Cold shock domain protein 2-like protein n=1 Tax=Oryza sativa Japonica Group RepID=Q5JKD6_ORYSJ Length = 221 Score = 65.5 bits (158), Expect = 5e-10, Method: Composition-based stats. Identities = 28/69 (40%), Positives = 47/69 (68%) Query: 1 MSNKMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQR 60 +S ++ G+VK F+A GF FITPDDGS+D+F+H ++++ + +R+LN++ +E S+ Sbjct: 2 VSERVKGMVKGFDATNGFSFITPDDGSEDLFIHQSSLKFDGYRSLNDDDVIELSVGSSDD 61 Query: 61 GPAAANVVT 69 G A VT Sbjct: 62 GRTKAVDVT 70 >UniRef50_D1BKC9 Cold shock domain protein CspD n=31 Tax=Bacteria RepID=D1BKC9_SANKS Length = 317 Score = 65.5 bits (158), Expect = 5e-10, Method: Composition-based stats. Identities = 31/63 (49%), Positives = 43/63 (68%), Gaps = 2/63 (3%) Query: 7 GLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNE--FRTLNENQKVEFSIEQGQRGPAA 64 G V+WF+A++GFGF+ DDG+ D+FVH + I N+ ++L E Q VEF I +G RGP A Sbjct: 4 GTVRWFDAERGFGFLALDDGADDLFVHASEIVGNDDGTQSLREGQSVEFEIGEGDRGPQA 63 Query: 65 ANV 67 V Sbjct: 64 RRV 66 Score = 57.0 bits (136), Expect = 2e-07, Method: Composition-based stats. Identities = 27/61 (44%), Positives = 39/61 (63%), Gaps = 2/61 (3%) Query: 7 GLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPAAAN 66 G+V ++A++GFGFITPD G D+FVH + ++ E + L E +V F + Q RGP A Sbjct: 256 GVVARYDAERGFGFITPDSGGPDLFVHVSVVR--EGQELYEGDRVRFQVRQSDRGPQADR 313 Query: 67 V 67 V Sbjct: 314 V 314 Score = 56.2 bits (134), Expect = 3e-07, Method: Composition-based stats. Identities = 27/59 (45%), Positives = 35/59 (59%), Gaps = 1/59 (1%) Query: 9 VKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPAAANV 67 V W++A KGFGF+TPD G D FVH ++ L E +V FS+ G RGP A +V Sbjct: 165 VSWYDAGKGFGFVTPDSGEPDAFVHARSLAGGA-TELVEGDRVSFSVVPGDRGPQAQDV 222 Score = 52.0 bits (123), Expect = 6e-06, Method: Composition-based stats. Identities = 23/58 (39%), Positives = 35/58 (60%), Gaps = 2/58 (3%) Query: 7 GLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPAA 64 G V W+ KG+GF+TPD G ++F H +AI + E Q+V F + +G++GP A Sbjct: 82 GTVTWYEPTKGYGFVTPDGGGAEIFAHSSAIVGGG--VIAEGQRVAFLVVEGEKGPQA 137 >UniRef50_B4SFC0 Cold-shock DNA-binding domain protein n=1 Tax=Pelodictyon phaeoclathratiforme BU-1 RepID=B4SFC0_PELPB Length = 74 Score = 65.1 bits (157), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 31/65 (47%), Positives = 40/65 (61%) Query: 6 TGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPAAA 65 TG VKWFN KGFGFI PD+G DVFVH ++ + TLNE KV++ + + AA Sbjct: 9 TGTVKWFNKMKGFGFIIPDNGGADVFVHINELEKSGLATLNEADKVKYDMVEKNGKVAAG 68 Query: 66 NVVTL 70 N+ L Sbjct: 69 NIQLL 73 >UniRef50_Q9AN51 Blr1947 protein n=2 Tax=Bradyrhizobium japonicum RepID=Q9AN51_BRAJA Length = 120 Score = 65.1 bits (157), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 29/64 (45%), Positives = 40/64 (62%) Query: 7 GLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPAAAN 66 G VKWFN KG+GF+ PDDG KDVFVH +A++ + +L E KV + + + G AA Sbjct: 56 GTVKWFNPTKGYGFVAPDDGGKDVFVHISAVEKAGYTSLVEGAKVGYELVTNRSGKQAAE 115 Query: 67 VVTL 70 + L Sbjct: 116 NLRL 119 >UniRef50_B9F7B8 Putative uncharacterized protein n=1 Tax=Oryza sativa Japonica Group RepID=B9F7B8_ORYSJ Length = 233 Score = 65.1 bits (157), Expect = 6e-10, Method: Composition-based stats. Identities = 28/69 (40%), Positives = 47/69 (68%) Query: 1 MSNKMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQR 60 +S ++ G VK F+A GFGFITPDD +D+F+H ++++ +++R+LN++ +E S+ G Sbjct: 2 VSERVKGTVKGFDATNGFGFITPDDDGEDLFIHQSSLKFDDYRSLNDSDVIELSVGSGND 61 Query: 61 GPAAANVVT 69 G A VT Sbjct: 62 GRNKAVDVT 70 >UniRef50_Q52287 Major cold shock protein (Fragment) n=22 Tax=cellular organisms RepID=CSPA_PHOPO Length = 46 Score = 64.7 bits (156), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 30/46 (65%), Positives = 35/46 (76%) Query: 15 DKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQR 60 +KGFGFIT D+G DVFVHF AI S F+TL E QKV F +EQGQ+ Sbjct: 1 EKGFGFITQDNGGADVFVHFRAIASEGFKTLAEGQKVSFEVEQGQK 46 >UniRef50_B4SCC3 Cold-shock DNA-binding domain protein n=4 Tax=cellular organisms RepID=B4SCC3_PELPB Length = 69 Score = 64.7 bits (156), Expect = 9e-10, Method: Compositional matrix adjust. Identities = 33/70 (47%), Positives = 42/70 (60%), Gaps = 1/70 (1%) Query: 1 MSNKMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQR 60 M ++ G VKWFN +KG+GFI G KDVFVH +AI +TL E QKV + QG + Sbjct: 1 MGTQVEGTVKWFNEEKGYGFI-EQKGGKDVFVHHSAINGTGRKTLVEGQKVMMEVTQGAK 59 Query: 61 GPAAANVVTL 70 G A +V L Sbjct: 60 GLQAEDVTPL 69 >UniRef50_Q1YTJ3 Cold shock protein n=1 Tax=gamma proteobacterium HTCC2207 RepID=Q1YTJ3_9GAMM Length = 89 Score = 64.7 bits (156), Expect = 9e-10, Method: Compositional matrix adjust. Identities = 27/63 (42%), Positives = 41/63 (65%) Query: 6 TGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPAAA 65 TG VKWF+ D+GFGFI PD+G +++F H I ++TL Q+V + +E G+ G A Sbjct: 4 TGRVKWFSNDRGFGFIEPDNGERELFAHHQNIIMEGYKTLKCFQRVTYDVEHGKNGRHAV 63 Query: 66 NVV 68 N++ Sbjct: 64 NII 66 >UniRef50_B3DPK3 Cold shock protein n=7 Tax=Bifidobacterium RepID=B3DPK3_BIFLD Length = 79 Score = 64.7 bits (156), Expect = 9e-10, Method: Compositional matrix adjust. Identities = 32/68 (47%), Positives = 44/68 (64%), Gaps = 4/68 (5%) Query: 7 GLVKWFNADKGFGFITPDDGSKDVFVHFTAIQ----SNEFRTLNENQKVEFSIEQGQRGP 62 G VK+F A KGFGFI PDDG +DVFVH+ I+ +N+F+ L E +VE++ +G Sbjct: 4 GTVKFFLAKKGFGFIQPDDGGEDVFVHYAEIKDDGSTNKFKMLYEGDRVEYTPASSGKGT 63 Query: 63 AAANVVTL 70 A +VV L Sbjct: 64 QAKDVVKL 71 >UniRef50_A8ILK3 Cold shock protein n=9 Tax=Proteobacteria RepID=A8ILK3_AZOC5 Length = 237 Score = 64.7 bits (156), Expect = 9e-10, Method: Compositional matrix adjust. Identities = 28/66 (42%), Positives = 40/66 (60%) Query: 2 SNKMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRG 61 + + G VKW+N +KGFGFI + G KDVFVH T + + L+E Q+V + QG +G Sbjct: 168 TEERVGTVKWYNPEKGFGFIAVEGGGKDVFVHVTVVSRSGLADLSEGQRVVVQVGQGPKG 227 Query: 62 PAAANV 67 P A + Sbjct: 228 PEARGI 233 Score = 53.9 bits (128), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 23/53 (43%), Positives = 34/53 (64%) Query: 9 VKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRG 61 VKWFN +KGFGF+ DGS DVF+H A+++ ++ K+ + QGQ+G Sbjct: 70 VKWFNPEKGFGFVELSDGSGDVFLHARALEAAGQESVPPGSKLSVRVGQGQKG 122 >UniRef50_Q90650 Rous sarcoma virus transcription enhancer factor II n=2 Tax=Tetrapoda RepID=Q90650_CHICK Length = 298 Score = 64.3 bits (155), Expect = 1e-09, Method: Composition-based stats. Identities = 31/71 (43%), Positives = 46/71 (64%), Gaps = 4/71 (5%) Query: 1 MSNKMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFR----TLNENQKVEFSIE 56 ++ K+ G VKWFN G+GFI +D +DVFVH TAI+ N R ++ + + VEF + Sbjct: 84 LATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLASVGDGETVEFDVV 143 Query: 57 QGQRGPAAANV 67 +G++G AANV Sbjct: 144 EGEKGAEAANV 154 >UniRef50_C5RAK7 Cold shock protein CspA n=1 Tax=Weissella paramesenteroides ATCC 33313 RepID=C5RAK7_WEIPA Length = 69 Score = 64.3 bits (155), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 34/68 (50%), Positives = 43/68 (63%), Gaps = 1/68 (1%) Query: 3 NKMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGP 62 K++G VK + +DKGFGFI G DVFVHF+AIQ+ R L Q+V+ + QG RGP Sbjct: 2 EKISGYVKTWQSDKGFGFIELK-GEDDVFVHFSAIQTPRVRDLTVGQEVKLVVVQGIRGP 60 Query: 63 AAANVVTL 70 AA V L Sbjct: 61 QAAAVEVL 68 >UniRef50_Q2S0T4 Conserved domain protein n=2 Tax=Bacteria RepID=Q2S0T4_SALRD Length = 110 Score = 63.9 bits (154), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 34/67 (50%), Positives = 45/67 (67%), Gaps = 3/67 (4%) Query: 6 TGLVKWFNADKGFGFI-TPDDGSKDVFVHFTAIQS-NEFRTLNENQKVEFSIEQGQRGPA 63 T VKWF+A KG+GFI PDDG +DVFVH++ IQS ++F+TL +Q V F + G +G Sbjct: 3 TSTVKWFDAKKGYGFIHHPDDG-EDVFVHYSNIQSDDDFKTLKSDQHVRFEMNDGPKGLH 61 Query: 64 AANVVTL 70 A V L Sbjct: 62 ALEVAPL 68 >UniRef50_Q5YVF2 Putative cold shock protein n=1 Tax=Nocardia farcinica RepID=Q5YVF2_NOCFA Length = 122 Score = 63.9 bits (154), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 31/61 (50%), Positives = 39/61 (63%) Query: 7 GLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPAAAN 66 G V WF+A+KGFGFITPDD S VFV F AI++ +RTL V + E+ + GP A Sbjct: 54 GTVAWFDAEKGFGFITPDDRSPAVFVEFHAIEAVGYRTLVAGGPVVYRAEETKAGPEAVA 113 Query: 67 V 67 V Sbjct: 114 V 114 >UniRef50_P16989 DNA-binding protein A n=144 Tax=cellular organisms RepID=DBPA_HUMAN Length = 372 Score = 63.9 bits (154), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 31/72 (43%), Positives = 46/72 (63%), Gaps = 4/72 (5%) Query: 1 MSNKMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNE----FRTLNENQKVEFSIE 56 ++ K+ G VKWFN G+GFI +D +DVFVH TAI+ N R++ + + VEF + Sbjct: 87 LATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDVV 146 Query: 57 QGQRGPAAANVV 68 +G++G AANV Sbjct: 147 EGEKGAEAANVT 158 >UniRef50_B0UEI2 Cold-shock DNA-binding domain protein n=11 Tax=Alphaproteobacteria RepID=B0UEI2_METS4 Length = 242 Score = 63.9 bits (154), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 28/67 (41%), Positives = 43/67 (64%) Query: 2 SNKMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRG 61 S +M+G VKW++ KGFGF++ DG KDVFVH +A+ +L E Q+V + +GQ+G Sbjct: 173 STEMSGTVKWYDPAKGFGFVSVKDGGKDVFVHRSALARAGLDSLAEGQQVTMGVVEGQKG 232 Query: 62 PAAANVV 68 A ++ Sbjct: 233 REAQSIT 239 Score = 56.2 bits (134), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 24/62 (38%), Positives = 36/62 (58%) Query: 9 VKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPAAANVV 68 VKWFN +KGFGF+ DGS D F+H A+++ L ++ QGQ+GP N+ Sbjct: 66 VKWFNKEKGFGFVELGDGSGDAFLHIRAVEAAGHADLLPGTRLTVQTAQGQKGPQVTNIT 125 Query: 69 TL 70 ++ Sbjct: 126 SV 127 >UniRef50_D1A5P8 Cold-shock DNA-binding domain protein n=33 Tax=Actinobacteridae RepID=D1A5P8_THECD Length = 135 Score = 63.9 bits (154), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 33/65 (50%), Positives = 45/65 (69%), Gaps = 2/65 (3%) Query: 6 TGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPAAA 65 TG VKW++A KGFGF+T DDG +VFVH +A+ S +L Q+VEF + +G+RG A Sbjct: 7 TGKVKWYDAGKGFGFLTRDDGG-EVFVHSSALPSG-VTSLKTGQRVEFGVVEGRRGQQAL 64 Query: 66 NVVTL 70 +V TL Sbjct: 65 SVRTL 69 >UniRef50_UPI000194E5B1 PREDICTED: Rous sarcoma virus transcription enhancer factor II n=1 Tax=Taeniopygia guttata RepID=UPI000194E5B1 Length = 420 Score = 63.2 bits (152), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 31/69 (44%), Positives = 44/69 (63%), Gaps = 4/69 (5%) Query: 4 KMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNE----FRTLNENQKVEFSIEQGQ 59 K+ G VKWFN G+GFI +D +DVFVH TAI+ N R++ + + VEF + +G+ Sbjct: 210 KVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDVVEGE 269 Query: 60 RGPAAANVV 68 +G AANV Sbjct: 270 KGAEAANVT 278 >UniRef50_C8WCQ1 Cold-shock DNA-binding domain protein n=18 Tax=Alphaproteobacteria RepID=C8WCQ1_ZYMMN Length = 303 Score = 63.2 bits (152), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 32/68 (47%), Positives = 43/68 (63%), Gaps = 1/68 (1%) Query: 4 KMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGP- 62 K +G VK+FNA KGFGFI DDG D FVH +A++ +LNE ++ F +E +RG Sbjct: 234 KSSGTVKFFNAMKGFGFIQRDDGQPDAFVHISAVERAGLPSLNEGDRLSFELEVDRRGKY 293 Query: 63 AAANVVTL 70 AA N+ L Sbjct: 294 AAVNLAQL 301 Score = 57.4 bits (137), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 26/56 (46%), Positives = 39/56 (69%), Gaps = 1/56 (1%) Query: 6 TGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFS-IEQGQR 60 TG+VK+FN+ KGFGF+ DDG +DVFVH +A++ L E Q + F+ +++G R Sbjct: 137 TGVVKFFNSQKGFGFVVRDDGGEDVFVHISAVEQAGLTGLAEGQPLSFTLVDRGGR 192 >UniRef50_C1E859 Cold-shock protein with RNA binding domain n=2 Tax=Micromonas RepID=C1E859_9CHLO Length = 305 Score = 63.2 bits (152), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 28/53 (52%), Positives = 36/53 (67%) Query: 4 KMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIE 56 K G+V WFN KGFGF+T DDG DVFVH + I + FR+L + + VEF +E Sbjct: 43 KYKGVVNWFNVAKGFGFVTRDDGVGDVFVHQSDIYAEGFRSLRDQEPVEFELE 95 >UniRef50_Q1NG42 Cold shock protein n=3 Tax=Alphaproteobacteria RepID=Q1NG42_9SPHN Length = 153 Score = 62.8 bits (151), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 29/63 (46%), Positives = 40/63 (63%) Query: 3 NKMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGP 62 + +G VK+FNA KGFGFI DDG D FVH +A++ LNE +++F +E +RG Sbjct: 83 ERASGTVKFFNAMKGFGFIQRDDGQPDAFVHISAVERAGMAALNEGDRLDFELEVDRRGK 142 Query: 63 AAA 65 AA Sbjct: 143 YAA 145 >UniRef50_D0MCR5 Cold-shock DNA-binding domain protein n=1 Tax=Rhodothermus marinus DSM 4252 RepID=D0MCR5_RHOM4 Length = 76 Score = 62.8 bits (151), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 31/65 (47%), Positives = 42/65 (64%), Gaps = 1/65 (1%) Query: 7 GLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEF-RTLNENQKVEFSIEQGQRGPAAA 65 G VKWFN DKG+GFI P+DGSKDVFVH + + L E ++V + +E+ +G +A Sbjct: 5 GRVKWFNIDKGYGFIEPNDGSKDVFVHRNNVPGLGWDEGLREGEEVSYEVERTPKGLSAM 64 Query: 66 NVVTL 70 NV L Sbjct: 65 NVERL 69 >UniRef50_B7PM92 PIN domain-containing RNA-binding protein, putative n=2 Tax=Ixodes scapularis RepID=B7PM92_IXOSC Length = 315 Score = 62.8 bits (151), Expect = 3e-09, Method: Composition-based stats. Identities = 30/71 (42%), Positives = 44/71 (61%), Gaps = 4/71 (5%) Query: 1 MSNKMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNE----FRTLNENQKVEFSIE 56 ++ ++ G VKWFN G+GFI +D +D+FVH TAI N R++ E + VEF + Sbjct: 13 LAERVLGTVKWFNVKNGYGFINRNDTREDIFVHQTAITRNNPQKIMRSVGEGETVEFDVV 72 Query: 57 QGQRGPAAANV 67 G++G AANV Sbjct: 73 VGEKGREAANV 83 >UniRef50_Q4H2L8 Y-box protein 1/2/3 n=2 Tax=Ciona intestinalis RepID=Q4H2L8_CIOIN Length = 320 Score = 62.8 bits (151), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 30/73 (41%), Positives = 47/73 (64%), Gaps = 5/73 (6%) Query: 1 MSNKMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNE----FRTLNENQKVEFSIE 56 +++ +G+VKWFN G+GF+ DD +DVF+H TAI N R++ + + VEF + Sbjct: 22 LASHCSGVVKWFNVRNGYGFVNRDDNKEDVFIHQTAIIKNNPKKYLRSVGDGENVEFDVV 81 Query: 57 QGQRG-PAAANVV 68 +G++G P AANV Sbjct: 82 EGEKGLPEAANVT 94 >UniRef50_B8KR01 'Cold-shock' DNA-binding domain protein n=1 Tax=gamma proteobacterium NOR51-B RepID=B8KR01_9GAMM Length = 123 Score = 62.8 bits (151), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 30/64 (46%), Positives = 42/64 (65%), Gaps = 1/64 (1%) Query: 7 GLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPAAAN 66 G +KWFNA KGFGFIT DDG+ +VFVHF ++ R + Q+V + + + +RGP A + Sbjct: 61 GSIKWFNATKGFGFITGDDGN-EVFVHFRNVEQLSKREIKPGQRVAYRVTETERGPQAED 119 Query: 67 VVTL 70 V L Sbjct: 120 VSPL 123 >UniRef50_Q2W0B3 Cold shock protein n=3 Tax=Magnetospirillum RepID=Q2W0B3_MAGSA Length = 200 Score = 62.4 bits (150), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 28/69 (40%), Positives = 43/69 (62%) Query: 2 SNKMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRG 61 + + G+VK+F+A+KGFGF+ D G KDVFVH A++ + +TL Q+V + G +G Sbjct: 132 TETVEGVVKFFSAEKGFGFVACDQGGKDVFVHVKALERSGIKTLESGQRVRVTTTLGLKG 191 Query: 62 PAAANVVTL 70 P A V + Sbjct: 192 PQADTVAII 200 Score = 60.8 bits (146), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 25/58 (43%), Positives = 35/58 (60%) Query: 5 MTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGP 62 ++ VKWFNA KGFGF+ P DGS D F+H +A++ + E + + GQRGP Sbjct: 49 VSATVKWFNASKGFGFVAPSDGSPDAFLHISALERAGLTQVAEGATLVVDLGAGQRGP 106 >UniRef50_A0Z255 Cold shock protein, CspA family-like protein n=1 Tax=marine gamma proteobacterium HTCC2080 RepID=A0Z255_9GAMM Length = 138 Score = 62.4 bits (150), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 28/61 (45%), Positives = 40/61 (65%), Gaps = 1/61 (1%) Query: 7 GLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPAAAN 66 G +KWFNA KGFGFI DDG+ +VFVH+ ++ R++ + Q+V +S+ RGP A Sbjct: 76 GNIKWFNATKGFGFIVGDDGA-EVFVHYRNVEGLTKRSIKQGQRVAYSVRASDRGPQAEG 134 Query: 67 V 67 V Sbjct: 135 V 135 >UniRef50_D0LU49 Cold-shock DNA-binding domain protein n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LU49_HALO1 Length = 94 Score = 62.0 bits (149), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 30/62 (48%), Positives = 44/62 (70%), Gaps = 1/62 (1%) Query: 6 TGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPAAA 65 TG VKWFN KG+GFI +DG +DVFVH++ I ++ +R L E + VE+ +++G +G AA Sbjct: 3 TGAVKWFNNVKGYGFILREDG-QDVFVHWSNILADGYRLLTEGEIVEYELQEGPKGLFAA 61 Query: 66 NV 67 V Sbjct: 62 QV 63 >UniRef50_D2QP83 Cold-shock DNA-binding domain protein n=5 Tax=Bacteroidetes RepID=D2QP83_9SPHI Length = 198 Score = 62.0 bits (149), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 31/65 (47%), Positives = 40/65 (61%), Gaps = 4/65 (6%) Query: 6 TGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPAAA 65 TG VK+FN KGFGFI D D+FVH +A+ ++EN KV FSIE G++G A Sbjct: 138 TGTVKFFNETKGFGFIKSDSSGDDIFVHVSAL----IDQIHENDKVRFSIEHGRKGLNAV 193 Query: 66 NVVTL 70 N+ L Sbjct: 194 NIKLL 198 >UniRef50_UPI000051480C PREDICTED: similar to ypsilon schachtel CG5654-PA n=2 Tax=Apocrita RepID=UPI000051480C Length = 279 Score = 62.0 bits (149), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 32/72 (44%), Positives = 46/72 (63%), Gaps = 4/72 (5%) Query: 1 MSNKMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNE----FRTLNENQKVEFSIE 56 ++NK+TG VKWFN G+GFI +D +DVFVH +AI N R++ + + VEF + Sbjct: 20 IANKVTGTVKWFNVKSGYGFINRNDTKEDVFVHQSAIVKNNPRKAVRSVGDGEVVEFDVV 79 Query: 57 QGQRGPAAANVV 68 G++G AANV Sbjct: 80 IGEKGHEAANVT 91 >UniRef50_Q016S2 Putative nucleic acid binding protein (ISS) n=1 Tax=Ostreococcus tauri RepID=Q016S2_OSTTA Length = 125 Score = 61.6 bits (148), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 29/62 (46%), Positives = 37/62 (59%), Gaps = 6/62 (9%) Query: 2 SNKMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLN------ENQKVEFSI 55 S + G VKWFN KGFG+ITPDDG DVFVH +A++ FR + + VEF + Sbjct: 8 SARRRGKVKWFNCTKGFGYITPDDGEPDVFVHQSALKMEGFRRTDGRRFATQGDSVEFDV 67 Query: 56 EQ 57 E Sbjct: 68 EH 69 >UniRef50_UPI0000589074 PREDICTED: similar to ENSANGP00000011455 n=1 Tax=Strongylocentrotus purpuratus RepID=UPI0000589074 Length = 234 Score = 61.6 bits (148), Expect = 7e-09, Method: Composition-based stats. Identities = 27/61 (44%), Positives = 40/61 (65%) Query: 7 GLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPAAAN 66 G KWF+ K +GF+TPDDGS DVFVH I+ +R+L+ N++VE+ + ++G A Sbjct: 65 GKCKWFSLAKCYGFLTPDDGSGDVFVHQRVIKMVGYRSLDTNEEVEYKFQFSEKGREATT 124 Query: 67 V 67 V Sbjct: 125 V 125 >UniRef50_P46449 Cold shock-like protein cspD n=53 Tax=Bacteria RepID=CSPD_HAEIN Length = 72 Score = 61.6 bits (148), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 24/64 (37%), Positives = 40/64 (62%) Query: 7 GLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPAAAN 66 G+VKWFN KGFGFI+ + D+F H++ I+ + +R+L QKV+F + +G A Sbjct: 4 GIVKWFNNAKGFGFISAEGVDADIFAHYSVIEMDGYRSLKAGQKVQFEVLHSDKGSHATK 63 Query: 67 VVTL 70 ++ + Sbjct: 64 IIPI 67 >UniRef50_C4QN73 Y box binding protein, putative n=4 Tax=Bilateria RepID=C4QN73_SCHMA Length = 167 Score = 61.6 bits (148), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 30/71 (42%), Positives = 43/71 (60%), Gaps = 4/71 (5%) Query: 1 MSNKMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEF----RTLNENQKVEFSIE 56 M ++ G+VKWFN G+GFI D S D+FVH +AI N R+L E ++VEF + Sbjct: 22 MEERVKGVVKWFNVKAGYGFINRQDTSTDIFVHQSAISRNNPEKLQRSLQEGEEVEFYVV 81 Query: 57 QGQRGPAAANV 67 +G +G A+ V Sbjct: 82 EGDKGDEASEV 92 >UniRef50_C4WSK9 ACYPI003867 protein n=1 Tax=Acyrthosiphon pisum RepID=C4WSK9_ACYPI Length = 305 Score = 61.2 bits (147), Expect = 9e-09, Method: Compositional matrix adjust. Identities = 31/72 (43%), Positives = 47/72 (65%), Gaps = 4/72 (5%) Query: 1 MSNKMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNE----FRTLNENQKVEFSIE 56 +S K+TG+VKWFN G+GFI +D +D+FVH +AI N R++ + + VEF + Sbjct: 24 ISVKVTGVVKWFNVKSGYGFINRNDTKEDIFVHQSAIIKNNPKKIVRSVGDGETVEFDVV 83 Query: 57 QGQRGPAAANVV 68 +G++G AANV Sbjct: 84 EGEKGHEAANVT 95 >UniRef50_A0NEN6 AGAP006108-PA n=4 Tax=Culicimorpha RepID=A0NEN6_ANOGA Length = 402 Score = 60.8 bits (146), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 31/72 (43%), Positives = 46/72 (63%), Gaps = 4/72 (5%) Query: 1 MSNKMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNE----FRTLNENQKVEFSIE 56 ++ K+TG+VKWFN G+GFI D +DVFVH +AI N R++ + ++VEF + Sbjct: 84 IATKVTGVVKWFNVKSGYGFINRGDTQEDVFVHQSAIARNNPKKAVRSVGDGEQVEFDVV 143 Query: 57 QGQRGPAAANVV 68 G++G AANV Sbjct: 144 IGEKGNEAANVT 155 >UniRef50_B7RWZ3 'Cold-shock' DNA-binding domain protein n=1 Tax=marine gamma proteobacterium HTCC2148 RepID=B7RWZ3_9GAMM Length = 145 Score = 60.8 bits (146), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 32/64 (50%), Positives = 39/64 (60%), Gaps = 1/64 (1%) Query: 7 GLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPAAAN 66 G VKWFN KGFGFIT DDG +++FVHF +I R L + Q+V F +GP A N Sbjct: 83 GEVKWFNVSKGFGFITKDDG-EEIFVHFRSIIGEGRRGLKDGQRVSFVEANTDKGPQAEN 141 Query: 67 VVTL 70 V L Sbjct: 142 VEPL 145 >UniRef50_B6KPP5 Glycine-rich protein 2, putative n=3 Tax=Toxoplasma gondii RepID=B6KPP5_TOXGO Length = 209 Score = 60.8 bits (146), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 31/63 (49%), Positives = 41/63 (65%), Gaps = 1/63 (1%) Query: 7 GLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPAAAN 66 G KWF++ KGFGFIT +DG+ D+FVH T I++ FR L E + VEF ++ G G A Sbjct: 90 GHCKWFDSKKGFGFITAEDGT-DLFVHQTEIKAQGFRNLAEGESVEFRVQVGHDGKRKAV 148 Query: 67 VVT 69 VT Sbjct: 149 SVT 151 >UniRef50_C4QN75 Y box binding protein, putative n=10 Tax=cellular organisms RepID=C4QN75_SCHMA Length = 231 Score = 60.8 bits (146), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 30/72 (41%), Positives = 43/72 (59%), Gaps = 4/72 (5%) Query: 1 MSNKMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEF----RTLNENQKVEFSIE 56 M ++ G+VKWFN G+GFI D S D+FVH +AI N R+L E ++VEF + Sbjct: 22 MEERVKGVVKWFNVKAGYGFINRQDTSTDIFVHQSAISRNNPEKLQRSLQEGEEVEFYVV 81 Query: 57 QGQRGPAAANVV 68 +G +G A+ V Sbjct: 82 EGDKGDEASEVT 93 >UniRef50_D0Z9M8 Cold shock-like protein n=3 Tax=Enterobacteriaceae RepID=D0Z9M8_EDWTE Length = 69 Score = 60.5 bits (145), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 29/69 (42%), Positives = 42/69 (60%), Gaps = 1/69 (1%) Query: 1 MSNKMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQR 60 M+ KM G VKW++ G G I+P DG D++V+ T I S + L E Q+VEFS +G+R Sbjct: 1 MTLKM-GFVKWYDPSAGLGVISPLDGGDDLYVNRTGIASARNKLLREGQRVEFSTPRGRR 59 Query: 61 GPAAANVVT 69 A +V+ Sbjct: 60 SQMAEDVIA 68 >UniRef50_O46173 Y-box protein n=14 Tax=cellular organisms RepID=O46173_DROME Length = 359 Score = 60.5 bits (145), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 31/71 (43%), Positives = 46/71 (64%), Gaps = 3/71 (4%) Query: 1 MSNKMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNE---FRTLNENQKVEFSIEQ 57 ++ K+TG VKWFN G+GFI +D +DVFVH +AI +N R++ + + VEF + Sbjct: 59 IATKVTGTVKWFNVKSGYGFINRNDTREDVFVHQSAIANNPKKAVRSVGDGEVVEFDVVI 118 Query: 58 GQRGPAAANVV 68 G++G AANV Sbjct: 119 GEKGNEAANVT 129 >UniRef50_Q90WH1 Cold-shock domain protein (Fragment) n=4 Tax=Percomorpha RepID=Q90WH1_ORYLA Length = 366 Score = 60.1 bits (144), Expect = 2e-08, Method: Composition-based stats. Identities = 29/65 (44%), Positives = 40/65 (61%), Gaps = 4/65 (6%) Query: 7 GLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNE----FRTLNENQKVEFSIEQGQRGP 62 G VKWFN G+GFI +D +DVFVH TAI+ N R++ + + VEF + + +G Sbjct: 5 GTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKFLRSVGDGEVVEFDVIEAAKGS 64 Query: 63 AAANV 67 AANV Sbjct: 65 EAANV 69 >UniRef50_O62213 Protein F33A8.3, confirmed by transcript evidence n=2 Tax=Caenorhabditis RepID=O62213_CAEEL Length = 208 Score = 60.1 bits (144), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 31/69 (44%), Positives = 44/69 (63%), Gaps = 4/69 (5%) Query: 4 KMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNE----FRTLNENQKVEFSIEQGQ 59 K+ G VKWFN G+GFI D ++D+FVH TAI +N R+L +N++V F I +G Sbjct: 20 KVKGTVKWFNVKNGYGFINRTDTNEDIFVHQTAIINNNPNKYLRSLGDNEEVMFDIVEGS 79 Query: 60 RGPAAANVV 68 +G AA+V Sbjct: 80 KGLEAASVT 88 >UniRef50_Q4ZRK5 Cold-shock protein, DNA-binding n=10 Tax=Pseudomonas RepID=Q4ZRK5_PSEU2 Length = 92 Score = 59.7 bits (143), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 29/64 (45%), Positives = 41/64 (64%), Gaps = 1/64 (1%) Query: 5 MTGLVKWFNADKGFGFITPDDGS-KDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPA 63 + G VKWFN KGFGFI + S +D+FVHF+AI+ + ++TL QKV F + G +G Sbjct: 2 IEGKVKWFNNAKGFGFINAEGKSDEDLFVHFSAIEMDGYKTLKAGQKVRFEVAHGPKGLQ 61 Query: 64 AANV 67 A + Sbjct: 62 AIKI 65 >UniRef50_P91306 Y-box protein 2 n=6 Tax=Caenorhabditis RepID=P91306_CAEEL Length = 267 Score = 59.7 bits (143), Expect = 3e-08, Method: Composition-based stats. Identities = 29/72 (40%), Positives = 47/72 (65%), Gaps = 5/72 (6%) Query: 1 MSNKMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNE-----FRTLNENQKVEFSI 55 ++ + G VKW++ + +GFI+ +DG KD+FVH TAI + RTL ++++V F + Sbjct: 62 ITTGLQGKVKWYSVLRRYGFISRNDGEKDIFVHQTAIAKSATEKFYLRTLGDDEEVLFDL 121 Query: 56 EQGQRGPAAANV 67 +G+ GP AANV Sbjct: 122 VEGKNGPEAANV 133 >UniRef50_UPI0001555D69 PREDICTED: similar to LD37574p, partial n=1 Tax=Ornithorhynchus anatinus RepID=UPI0001555D69 Length = 281 Score = 59.7 bits (143), Expect = 3e-08, Method: Composition-based stats. Identities = 29/74 (39%), Positives = 44/74 (59%), Gaps = 4/74 (5%) Query: 1 MSNKMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNE----FRTLNENQKVEFSIE 56 ++ ++ G+VKWFN G+GFI D +DVF+H +AI N R++ E + V+F + Sbjct: 32 LATRIVGVVKWFNVRHGYGFICRIDMQEDVFIHQSAIVRNNPRKCQRSVGEGEVVQFDLV 91 Query: 57 QGQRGPAAANVVTL 70 G +G AANV L Sbjct: 92 AGAKGTEAANVTGL 105 >UniRef50_A0R441 'Cold-shock' DNA-binding domain protein n=18 Tax=Actinomycetales RepID=A0R441_MYCS2 Length = 149 Score = 59.3 bits (142), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 27/62 (43%), Positives = 43/62 (69%), Gaps = 2/62 (3%) Query: 6 TGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPAAA 65 TG VKW++A+KGFGF++ +DG +DV+V +A+ + L Q+VEF + G+RGP A Sbjct: 16 TGKVKWYDAEKGFGFLSQEDG-EDVYVRSSALPAG-VEALKSGQRVEFGVAAGRRGPQAL 73 Query: 66 NV 67 ++ Sbjct: 74 SL 75 >UniRef50_Q2S3Y3 'Cold-shock' DNA-binding domain, putative n=1 Tax=Salinibacter ruber DSM 13855 RepID=Q2S3Y3_SALRD Length = 69 Score = 59.3 bits (142), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 26/65 (40%), Positives = 41/65 (63%), Gaps = 3/65 (4%) Query: 6 TGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPAAA 65 TG VKWF+ +G+GF+ PD+G DVF+H + + + L E ++EF IE+ ++G A Sbjct: 3 TGTVKWFSPAEGYGFVEPDNGEDDVFLHHSEVPDED---LEEGDRLEFEIEETEKGLNAV 59 Query: 66 NVVTL 70 N+ L Sbjct: 60 NIEAL 64 >UniRef50_Q4UBG6 Cold shock protein, putative n=2 Tax=Theileria RepID=Q4UBG6_THEAN Length = 95 Score = 59.3 bits (142), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 26/52 (50%), Positives = 40/52 (76%), Gaps = 1/52 (1%) Query: 4 KMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSI 55 ++ G+ KWFN KG+GFIT ++G +DVFVH + I ++ FR+L+EN+KVE + Sbjct: 3 RLNGVCKWFNNKKGYGFITLENG-EDVFVHQSEIYADGFRSLHENEKVELEV 53 >UniRef50_C4K358 RNA chaperone, transcription antiterminator n=3 Tax=Enterobacteriaceae RepID=C4K358_HAMD5 Length = 69 Score = 59.3 bits (142), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 27/64 (42%), Positives = 40/64 (62%) Query: 7 GLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPAAAN 66 G VKWF+ G+GFI+P+DG D++VH AI + + ++L Q VEFS GP+A + Sbjct: 6 GKVKWFDKIAGYGFISPEDGGLDIYVHKAAIANIKDKSLIAGQDVEFSYRVSFHGPSAED 65 Query: 67 VVTL 70 V+ Sbjct: 66 VIAF 69 >UniRef50_A1U3R2 Cold-shock DNA-binding protein family n=3 Tax=Marinobacter RepID=A1U3R2_MARAV Length = 179 Score = 58.9 bits (141), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 30/64 (46%), Positives = 38/64 (59%), Gaps = 1/64 (1%) Query: 7 GLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPAAAN 66 G VKWFN KGFGFI D G ++FVHF AI+ R L + Q V F++ + +G A N Sbjct: 115 GTVKWFNVKKGFGFIVRDSGD-EIFVHFRAIRGRGRRVLRQGQLVRFNVVEADKGLQADN 173 Query: 67 VVTL 70 V L Sbjct: 174 VSIL 177 >UniRef50_Q47TE2 Cold-shock DNA-binding protein family n=9 Tax=Actinobacteria (class) RepID=Q47TE2_THEFY Length = 127 Score = 58.9 bits (141), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 31/65 (47%), Positives = 42/65 (64%), Gaps = 2/65 (3%) Query: 6 TGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPAAA 65 TG VKW++A KGFGF+T DDG +VF+H +A+ TL Q+VEF I +G++G A Sbjct: 3 TGKVKWYDAGKGFGFLTKDDGG-EVFLHASALPPGTT-TLRPGQRVEFGIVEGRKGTQAL 60 Query: 66 NVVTL 70 V L Sbjct: 61 QVRLL 65 >UniRef50_Q0RYK4 Probable cold shock protein CspA n=1 Tax=Rhodococcus jostii RHA1 RepID=Q0RYK4_RHOSR Length = 79 Score = 58.9 bits (141), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 28/57 (49%), Positives = 36/57 (63%), Gaps = 3/57 (5%) Query: 13 NADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPAAANVVT 69 N +KGFGF PD G VFVHF+ I F+TL+E Q +E+ + QGQ+G A N T Sbjct: 25 NGEKGFGFTAPDGG---VFVHFSEIAGRGFKTLDEGQHMEYEVSQGQKGVQAENAQT 78 >UniRef50_C0Z2E8 AT4G38680 protein n=103 Tax=cellular organisms RepID=C0Z2E8_ARATH Length = 204 Score = 58.9 bits (141), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 25/42 (59%), Positives = 32/42 (76%) Query: 4 KMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTL 45 + G VKWF+ KGFGFITPDDG D+FVH ++I+S FR+L Sbjct: 10 RRKGSVKWFDTQKGFGFITPDDGGDDLFVHQSSIRSEGFRSL 51 >UniRef50_A1U1H2 Cold-shock DNA-binding protein family n=5 Tax=Gammaproteobacteria RepID=A1U1H2_MARAV Length = 103 Score = 58.9 bits (141), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 27/62 (43%), Positives = 38/62 (61%) Query: 7 GLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPAAAN 66 G VKWFN KG+GFI D S D+F HF+++Q + ++TL Q V F + +G A N Sbjct: 4 GKVKWFNNAKGYGFIIEDGCSDDLFAHFSSVQMDGYKTLKAGQTVTFDKKPSDKGVHAIN 63 Query: 67 VV 68 +V Sbjct: 64 IV 65 >UniRef50_Q2RQP4 Cold-shock DNA-binding protein family n=1 Tax=Rhodospirillum rubrum ATCC 11170 RepID=Q2RQP4_RHORT Length = 70 Score = 58.9 bits (141), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 27/61 (44%), Positives = 37/61 (60%), Gaps = 1/61 (1%) Query: 6 TGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPAAA 65 TG VKWFN KGFGFI PDDG D FVH +A++ + R+ + S ++ +R P A+ Sbjct: 3 TGTVKWFNVQKGFGFIAPDDGGSDAFVHISAVERSSDRSP-PGYRCRESRDRKRRWPGAS 61 Query: 66 N 66 Sbjct: 62 R 62 >UniRef50_A0PKZ5 Cold shock-like protein B CspB n=78 Tax=Actinomycetales RepID=A0PKZ5_MYCUA Length = 184 Score = 58.5 bits (140), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 28/65 (43%), Positives = 44/65 (67%), Gaps = 2/65 (3%) Query: 6 TGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPAAA 65 TG VKW+++DKGFGF++ ++G +DV+V +A+ + L Q+VEF I G+RGP A Sbjct: 53 TGKVKWYDSDKGFGFLSQEEG-EDVYVRSSALPAG-VEGLKAGQRVEFGIASGRRGPQAL 110 Query: 66 NVVTL 70 ++ L Sbjct: 111 SLKLL 115 >UniRef50_Q9Y2T7 Y-box-binding protein 2 n=21 Tax=Tetrapoda RepID=YBOX2_HUMAN Length = 364 Score = 58.5 bits (140), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 29/69 (42%), Positives = 43/69 (62%), Gaps = 4/69 (5%) Query: 4 KMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNE----FRTLNENQKVEFSIEQGQ 59 ++ G VKWFN G+GFI +D +DVFVH TAI+ N R++ + + VEF + +G+ Sbjct: 93 QVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKRNNPRKFLRSVGDGETVEFDVVEGE 152 Query: 60 RGPAAANVV 68 +G A NV Sbjct: 153 KGAEATNVT 161 >UniRef50_UPI00004F1407 PREDICTED: similar to CSDA protein n=1 Tax=Bos taurus RepID=UPI00004F1407 Length = 323 Score = 58.5 bits (140), Expect = 6e-08, Method: Composition-based stats. Identities = 30/71 (42%), Positives = 44/71 (61%), Gaps = 4/71 (5%) Query: 1 MSNKMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNE---FR-TLNENQKVEFSIE 56 +S ++ G V WF KG+GFI+ D +DVFVH TAI +R ++++ + VEF + Sbjct: 64 ISKRVLGTVVWFKEKKGYGFISRQDTQEDVFVHHTAITGKNPCTYRGSVDDGEMVEFDVV 123 Query: 57 QGQRGPAAANV 67 QG+ G AANV Sbjct: 124 QGEWGTEAANV 134 >UniRef50_Q1RLA8 Zinc finger protein n=1 Tax=Ciona intestinalis RepID=Q1RLA8_CIOIN Length = 193 Score = 58.5 bits (140), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 29/65 (44%), Positives = 41/65 (63%), Gaps = 3/65 (4%) Query: 7 GLVKWFNADKGFGFITPDDGSK---DVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPA 63 G KWFN+ +G+GFITPD S+ DVFVH ++I FR+L E +V+F + ++G Sbjct: 29 GNCKWFNSKQGYGFITPDTSSQEKTDVFVHQSSIDMEGFRSLQEGDRVKFWYKPSKKGLE 88 Query: 64 AANVV 68 A VV Sbjct: 89 AVKVV 93 >UniRef50_A8PLB9 'Cold-shock' DNA-binding domain containing protein n=1 Tax=Brugia malayi RepID=A8PLB9_BRUMA Length = 205 Score = 58.5 bits (140), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 32/71 (45%), Positives = 42/71 (59%), Gaps = 8/71 (11%) Query: 7 GLVKWFNADKGFGFITPDDGSKDVFVHFTA----IQS----NEFRTLNENQKVEFSIEQG 58 G KWFN KG+GFITPD+G DVFVH + IQS + FR+L+ ++V F I + Sbjct: 11 GTCKWFNVLKGYGFITPDEGGDDVFVHQASGVFFIQSELNMDGFRSLDAGERVRFVIRRR 70 Query: 59 QRGPAAANVVT 69 G A VV+ Sbjct: 71 PEGNEATAVVS 81 >UniRef50_Q1QLF4 Cold-shock DNA-binding protein family n=1 Tax=Nitrobacter hamburgensis X14 RepID=Q1QLF4_NITHX Length = 68 Score = 58.5 bits (140), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 27/65 (41%), Positives = 41/65 (63%), Gaps = 1/65 (1%) Query: 6 TGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPAAA 65 TG VK+FNA+KG+GFI PDDG+ D+F+H + +++ R +VE+ + +G G A Sbjct: 3 TGSVKFFNAEKGYGFIQPDDGTPDIFLHVHGL-ADKLRYPCPRDRVEYEVGKGPDGRLRA 61 Query: 66 NVVTL 70 V L Sbjct: 62 ERVAL 66 >UniRef50_D1U4V2 Cold-shock DNA-binding domain protein n=1 Tax=Desulfovibrio aespoeensis Aspo-2 RepID=D1U4V2_9DELT Length = 76 Score = 58.5 bits (140), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 28/64 (43%), Positives = 40/64 (62%), Gaps = 1/64 (1%) Query: 4 KMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPA 63 + G V WFN KGFGFIT DDG DVFVH+T I + F++L ++V +++ + P Sbjct: 2 RREGKVTWFNDKKGFGFITGDDGL-DVFVHYTEIVRDGFQSLEPGERVSYAVTDEEIAPK 60 Query: 64 AANV 67 A +V Sbjct: 61 AVDV 64 >UniRef50_A9KN41 Cold-shock DNA-binding domain protein n=22 Tax=Firmicutes RepID=A9KN41_CLOPH Length = 70 Score = 58.2 bits (139), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 27/68 (39%), Positives = 49/68 (72%), Gaps = 3/68 (4%) Query: 1 MSNKMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEF-RTLNENQKVEFSIEQGQ 59 M+N TG VKW+++++G+GF++ +DG +DVF+H + I+ F + ++E + + F I + + Sbjct: 1 MAN-YTGTVKWYDSERGYGFVSTNDG-RDVFLHHSQIKEKGFDKEVHEGESIGFDIIEQE 58 Query: 60 RGPAAANV 67 +GPAA NV Sbjct: 59 KGPAAINV 66 >UniRef50_Q0VN88 Cold-shock domain family protein n=2 Tax=Alcanivorax RepID=Q0VN88_ALCBS Length = 76 Score = 58.2 bits (139), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 30/64 (46%), Positives = 38/64 (59%), Gaps = 1/64 (1%) Query: 4 KMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPA 63 + G VKWFN +KGFGFI D G +++FVHF A+Q+ R+L KV F RG Sbjct: 10 QQRGEVKWFNPNKGFGFILTDSG-EELFVHFKAVQNGGRRSLRTGTKVRFDTRMSDRGEQ 68 Query: 64 AANV 67 A NV Sbjct: 69 ADNV 72 >UniRef50_A5VJ42 Cold-shock DNA-binding protein family n=10 Tax=Lactobacillus RepID=A5VJ42_LACRD Length = 67 Score = 58.2 bits (139), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 29/67 (43%), Positives = 44/67 (65%), Gaps = 3/67 (4%) Query: 5 MTGLVKWFNADKGFGFIT-PDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPA 63 + G VK F+ KG+GFIT P +G ++FVH++ I+ R L+ +++V I QGQ+GP Sbjct: 2 LKGKVKSFDEQKGWGFITVPHEG--EIFVHYSGIEGTRRRILHPDEEVSLVIVQGQKGPQ 59 Query: 64 AANVVTL 70 AA+V L Sbjct: 60 AAHVRVL 66 >UniRef50_Q1RHK6 Cold shock-like protein cspA n=15 Tax=Rickettsia RepID=CSPA_RICBR Length = 70 Score = 57.8 bits (138), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 29/67 (43%), Positives = 39/67 (58%) Query: 1 MSNKMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQR 60 M+ + G VKWFN K FGFI ++G KDVFVH +A+ + LNE Q V F +E Sbjct: 1 MTTNIVGKVKWFNPTKNFGFIEQENGGKDVFVHRSAVDAAGLAGLNEGQDVIFDLEDKNG 60 Query: 61 GPAAANV 67 +A N+ Sbjct: 61 KISAVNL 67 >UniRef50_C8SGB1 Cold-shock DNA-binding domain protein n=4 Tax=Mesorhizobium RepID=C8SGB1_9RHIZ Length = 199 Score = 57.8 bits (138), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 26/55 (47%), Positives = 33/55 (60%) Query: 7 GLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRG 61 G VKW++ KGFGFI P+ G KD FVH TA+ + L E Q V QG++G Sbjct: 136 GTVKWYDPQKGFGFIAPNKGEKDAFVHATALTRSGISELLEGQMVLVECGQGKKG 190 Score = 40.0 bits (92), Expect = 0.021, Method: Compositional matrix adjust. Identities = 18/53 (33%), Positives = 33/53 (62%), Gaps = 1/53 (1%) Query: 9 VKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRG 61 V WFNA KGFGF+ DG+ + ++ ++++ R + E +++ +IE+ RG Sbjct: 47 VMWFNAGKGFGFVKLLDGT-EAYLPVRVLEASGTRDVCEGTRLKVTIEERPRG 98 >UniRef50_A7HXE8 Putative cold-shock DNA-binding domain protein n=1 Tax=Parvibaculum lavamentivorans DS-1 RepID=A7HXE8_PARL1 Length = 199 Score = 57.4 bits (137), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 26/68 (38%), Positives = 40/68 (58%) Query: 1 MSNKMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQR 60 +S ++TG+VKWF+A KG+GFI P++G DV VH + ++ L+E V + + Sbjct: 34 VSFEITGVVKWFDAVKGYGFIIPENGGDDVLVHLSCLKQAGLEALDEGTTVTCEAVRRPK 93 Query: 61 GPAAANVV 68 G A VV Sbjct: 94 GAQAIRVV 101 Score = 49.7 bits (117), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 19/60 (31%), Positives = 34/60 (56%) Query: 8 LVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPAAANV 67 +VKWFN +G+GF+T +G+ D+F+H ++ R L Q++ +G +G A + Sbjct: 137 IVKWFNRARGYGFVTRGEGTPDIFIHMETLRRYGIRDLLPGQQINVRFGEGPKGLMVAEI 196 >UniRef50_UPI0000F32A39 PREDICTED: Bos taurus similar to transcription factor EF1(A) (LOC783156), mRNA. n=2 Tax=Laurasiatheria RepID=UPI0000F32A39 Length = 313 Score = 57.4 bits (137), Expect = 1e-07, Method: Composition-based stats. Identities = 30/71 (42%), Positives = 44/71 (61%), Gaps = 5/71 (7%) Query: 1 MSNKMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNE----FRTLNENQKVEFSIE 56 ++ K+ G VKWFN G+GFI +D +DVFVH TAI+ N R++ + + EF + Sbjct: 55 IATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGE-TEFDVV 113 Query: 57 QGQRGPAAANV 67 +G +G AANV Sbjct: 114 EGGKGAEAANV 124 >UniRef50_B6IXJ6 Cold shock-like protein CspA n=1 Tax=Rhodospirillum centenum SW RepID=B6IXJ6_RHOCS Length = 199 Score = 57.4 bits (137), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 24/58 (41%), Positives = 36/58 (62%) Query: 4 KMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRG 61 ++ G VKWF DKGFGF+T DDG KDVFVH + ++ +L ++V + + +G Sbjct: 132 ELEGSVKWFKDDKGFGFVTTDDGGKDVFVHKSILRRAGLESLQSGERVLMRVTEAPKG 189 Score = 53.1 bits (126), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 24/60 (40%), Positives = 32/60 (53%) Query: 9 VKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPAAANVV 68 VKWFN KGFGF+ P DG+ D F+H + + L E +V I G +GP +V Sbjct: 47 VKWFNGVKGFGFVAPADGTPDAFLHASVLSRVGLSDLAEGAEVMVVIGPGPKGPQVIRLV 106 >UniRef50_Q7NNC3 Gsr0488 protein n=1 Tax=Gloeobacter violaceus RepID=Q7NNC3_GLOVI Length = 65 Score = 57.4 bits (137), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 25/60 (41%), Positives = 36/60 (60%) Query: 8 LVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPAAANV 67 +V+WF+ G+G I DD ++VF+ FTAI +RT+ + V F + QG GP A NV Sbjct: 1 MVRWFDLQAGYGAIARDDTGEEVFLLFTAIPGEGYRTIAPSTAVHFELAQGPSGPVARNV 60 >UniRef50_B3QHW3 Cold-shock DNA-binding domain protein n=92 Tax=Alphaproteobacteria RepID=B3QHW3_RHOPT Length = 235 Score = 57.0 bits (136), Expect = 2e-07, Method: Composition-based stats. Identities = 22/67 (32%), Positives = 43/67 (64%) Query: 4 KMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPA 63 +++G++KWF+A KG+GF+ PD+G DV +H T ++ + ++T E ++ Q +G Sbjct: 68 EISGVIKWFDASKGYGFVVPDNGWPDVLLHVTVLRRDGYQTAYEGARIVVECVQRAKGYQ 127 Query: 64 AANVVTL 70 A +V++ Sbjct: 128 AFRIVSM 134 Score = 46.2 bits (108), Expect = 3e-04, Method: Composition-based stats. Identities = 22/59 (37%), Positives = 31/59 (52%) Query: 9 VKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPAAANV 67 VKWFN +GFGF+T +G+ D+FVH ++ L Q V G +G AA + Sbjct: 165 VKWFNRLRGFGFLTCGEGTPDIFVHMETLRRYGMTELRPGQYVLVRFGPGSKGMMAAEI 223 >UniRef50_B5X2B2 Y-box-binding protein 2-A n=1 Tax=Salmo salar RepID=B5X2B2_SALSA Length = 328 Score = 56.6 bits (135), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 29/72 (40%), Positives = 43/72 (59%), Gaps = 4/72 (5%) Query: 1 MSNKMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNE----FRTLNENQKVEFSIE 56 ++ + G VKWFN G+GFI +D +DVFVH TAI+ N R++ + + VEF + Sbjct: 26 IATAVQGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKFLRSVGDGEVVEFDVV 85 Query: 57 QGQRGPAAANVV 68 + +G AANV Sbjct: 86 EAAKGSEAANVT 97 >UniRef50_A3YF52 Cold-shock protein, DNA-binding n=2 Tax=Marinomonas RepID=A3YF52_9GAMM Length = 79 Score = 56.6 bits (135), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 30/67 (44%), Positives = 41/67 (61%), Gaps = 1/67 (1%) Query: 1 MSNKMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQR 60 M++K+ G VKWFN KG GFI D+ + DVFVH+ +I S +TL + Q V F I + Sbjct: 1 MTDKLKGTVKWFNDSKGVGFIQRDNEA-DVFVHYKSIVSEGHKTLKKGQAVSFFITENDF 59 Query: 61 GPAAANV 67 G A+ V Sbjct: 60 GRQASEV 66 >UniRef50_O13015 Y box protein 2 n=4 Tax=Clupeocephala RepID=O13015_CARAU Length = 297 Score = 56.6 bits (135), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 29/68 (42%), Positives = 41/68 (60%), Gaps = 4/68 (5%) Query: 5 MTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNE----FRTLNENQKVEFSIEQGQR 60 + G VKWFN G+GFI +D +DVFVH TAI+ N R++ + + VEF + + + Sbjct: 21 VEGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKFLRSVGDGEVVEFDVVEAAK 80 Query: 61 GPAAANVV 68 G AANV Sbjct: 81 GSEAANVT 88 >UniRef50_Q2RWM8 Cold-shock DNA-binding protein family n=1 Tax=Rhodospirillum rubrum ATCC 11170 RepID=Q2RWM8_RHORT Length = 68 Score = 56.6 bits (135), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 22/66 (33%), Positives = 39/66 (59%) Query: 5 MTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPAA 64 +TG + WF+ G+GFI PDDG D+ V A+ + R+L + Q+V + + + + G A Sbjct: 2 LTGTITWFDTINGYGFIRPDDGGGDIAVDMPALDRSGLRSLRDGQRVAYRLTRPRFGGAM 61 Query: 65 ANVVTL 70 A ++ + Sbjct: 62 AGMIRM 67 >UniRef50_A0M1Q5 Cold shock-like protein n=13 Tax=Bacteria RepID=A0M1Q5_GRAFK Length = 64 Score = 56.6 bits (135), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 27/64 (42%), Positives = 41/64 (64%), Gaps = 4/64 (6%) Query: 7 GLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPAAAN 66 G VK+FN KGFGFI DD ++D+FVH + + + E+ +V+F +EQG++G A N Sbjct: 4 GKVKFFNNTKGFGFIKADDSNEDIFVHSSGL----IDEIREDDRVQFEVEQGKKGLNAVN 59 Query: 67 VVTL 70 V + Sbjct: 60 VEVI 63 >UniRef50_A1UT19 Cold-shock DNA-binding family protein n=1 Tax=Bartonella bacilliformis KC583 RepID=A1UT19_BARBK Length = 179 Score = 56.6 bits (135), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 24/68 (35%), Positives = 44/68 (64%), Gaps = 1/68 (1%) Query: 4 KMTGLVKWFNADKGFGFITPD-DGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGP 62 ++TG++KWF++ KG+GF+TPD D+ +H + +Q + F+T E KV S+++ +RG Sbjct: 13 EITGIIKWFDSSKGYGFVTPDFPKLPDILLHISVMQRDGFQTALEGAKVVCSVKKTKRGL 72 Query: 63 AAANVVTL 70 V ++ Sbjct: 73 KCIQVKSI 80 Score = 49.7 bits (117), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 21/60 (35%), Positives = 34/60 (56%) Query: 8 LVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPAAANV 67 +VKWFN DKGFGF++ G++D+F+H ++ L Q V +G++G A + Sbjct: 109 IVKWFNRDKGFGFLSRGQGTEDIFIHMETLRRFGLTELRAGQVVIVRFGKGEKGLMTAEI 168 >UniRef50_B9MXF4 Predicted protein n=2 Tax=Populus trichocarpa RepID=B9MXF4_POPTR Length = 235 Score = 56.2 bits (134), Expect = 3e-07, Method: Composition-based stats. Identities = 29/53 (54%), Positives = 38/53 (71%), Gaps = 1/53 (1%) Query: 4 KMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSN-EFRTLNENQKVEFSI 55 + TG V F+ KGFGFI PD G KD+FVH +AI+S+ +RTL E+ VEF+I Sbjct: 13 RSTGRVVRFSDKKGFGFIKPDAGDKDLFVHHSAIKSDGGYRTLYEDDVVEFTI 65 >UniRef50_B7G5B5 Predicted protein n=1 Tax=Phaeodactylum tricornutum CCAP 1055/1 RepID=B7G5B5_PHATR Length = 286 Score = 56.2 bits (134), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 26/60 (43%), Positives = 42/60 (70%), Gaps = 5/60 (8%) Query: 3 NKMTGLVKWFNADKGFGFITP----DDGSKDVFVHFTAIQSN-EFRTLNENQKVEFSIEQ 57 +K+ G VKWF++ KG+GF+ P ++++FVH T+IQS +RTL EN ++EF +E+ Sbjct: 2 SKVQGTVKWFDSRKGYGFVAPTSDNSPTAEEIFVHQTSIQSEGAYRTLVENSEIEFDVEK 61 >UniRef50_D2QU65 Cold-shock DNA-binding domain protein n=23 Tax=Bacteroidetes RepID=D2QU65_9SPHI Length = 68 Score = 56.2 bits (134), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 26/62 (41%), Positives = 39/62 (62%), Gaps = 3/62 (4%) Query: 6 TGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPAAA 65 TG+VK+FN KG+GFI DD ++D+FVH T + T+ E +V+F + G++G A Sbjct: 3 TGVVKFFNESKGYGFIVEDDTNRDIFVHITGLNG---ITIREKDRVQFEVVDGKKGLNAV 59 Query: 66 NV 67 V Sbjct: 60 KV 61 >UniRef50_Q9EZJ7 Cold shock-like protein CspE (Fragment) n=1 Tax=Brucella abortus RepID=Q9EZJ7_BRUAB Length = 121 Score = 56.2 bits (134), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 24/70 (34%), Positives = 42/70 (60%), Gaps = 1/70 (1%) Query: 2 SNKMTGLVKWFNADKGFGFITPDD-GSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQR 60 S K++G +KWF+ KG+GFI PD G D+ +H T+++ + F+T E ++ + G R Sbjct: 23 SLKVSGHIKWFDVAKGYGFIVPDQPGLTDILLHVTSLRRDGFQTALEGARIVCEVRHGDR 82 Query: 61 GPAAANVVTL 70 G V+++ Sbjct: 83 GLQCFRVLSM 92 >UniRef50_B9KHN5 Cold shock protein (CspA) n=10 Tax=Anaplasmataceae RepID=B9KHN5_ANAMF Length = 92 Score = 56.2 bits (134), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 28/78 (35%), Positives = 41/78 (52%), Gaps = 13/78 (16%) Query: 6 TGLVKWFNADKGFGFITPDD-------------GSKDVFVHFTAIQSNEFRTLNENQKVE 52 TG VKWF+ +KG+GFI D G KDVFVH T++Q + L E Q+V Sbjct: 13 TGHVKWFSVEKGYGFICKDGSDDGKSGGASFGRGDKDVFVHITSLQRSRIDNLREGQRVR 72 Query: 53 FSIEQGQRGPAAANVVTL 70 + +++ +A N+ L Sbjct: 73 YQLDESNGKVSAVNLEVL 90 >UniRef50_A4V6J7 Y-Box factor protein (Fragment) n=1 Tax=Dugesia japonica RepID=A4V6J7_DUGJA Length = 178 Score = 55.8 bits (133), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 29/65 (44%), Positives = 41/65 (63%), Gaps = 3/65 (4%) Query: 7 GLVKWFNADKGFGFITPDDGSKDVFVHFTAI---QSNEFRTLNENQKVEFSIEQGQRGPA 63 G VKW+N KG+GFI DD +DVFVH +AI Q + ++L E++ V F + +G +G Sbjct: 5 GKVKWYNVKKGYGFIHRDDVDEDVFVHQSAISRCQPGKQKSLGEDEDVLFDVVKGSKGNE 64 Query: 64 AANVV 68 A NV Sbjct: 65 AMNVT 69 >UniRef50_A3YG84 Cold-shock protein CspD n=2 Tax=Marinomonas RepID=A3YG84_9GAMM Length = 92 Score = 55.8 bits (133), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 23/62 (37%), Positives = 39/62 (62%) Query: 7 GLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPAAAN 66 G VKWFN KG+GFI + +D+F+H+++I + ++TL Q V F G++G A + Sbjct: 4 GTVKWFNNAKGYGFIVSESFEEDLFIHYSSILIDGYKTLKAGQSVSFKTSPGKQGLHAVD 63 Query: 67 VV 68 ++ Sbjct: 64 IM 65 >UniRef50_Q5Z0N3 Putative cold shock protein n=2 Tax=Bacteria RepID=Q5Z0N3_NOCFA Length = 89 Score = 55.5 bits (132), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 26/54 (48%), Positives = 35/54 (64%), Gaps = 1/54 (1%) Query: 7 GLVKWFNADKGFGFITPDDGSK-DVFVHFTAIQSNEFRTLNENQKVEFSIEQGQ 59 G V WF+A KGFGFI P +G + VFV F++I+ + +RTL E Q V F G+ Sbjct: 17 GTVAWFDAPKGFGFIEPAEGPRGPVFVDFSSIEMSGYRTLVEGQPVRFVRSAGR 70 >UniRef50_B0VIQ0 Cold-shock domain family protein n=2 Tax=Bacteria RepID=B0VIQ0_9BACT Length = 74 Score = 55.5 bits (132), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 28/73 (38%), Positives = 45/73 (61%), Gaps = 4/73 (5%) Query: 1 MSNKMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSN---EFRTLNENQKVEFSIEQ 57 M M G VKWFN +KG+GFI DD +K+ FVH+ +I +N E + L +++ V F + + Sbjct: 1 MRFNMKGKVKWFNKNKGYGFIITDD-NKEYFVHWKSIVTNSPRELKVLEQDELVTFDLME 59 Query: 58 GQRGPAAANVVTL 70 +G A N++ + Sbjct: 60 TDKGIQAINIIRV 72 >UniRef50_A8NIV0 'Cold-shock' DNA-binding domain containing protein n=1 Tax=Brugia malayi RepID=A8NIV0_BRUMA Length = 244 Score = 55.5 bits (132), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 31/70 (44%), Positives = 41/70 (58%), Gaps = 6/70 (8%) Query: 5 MTGLVKWFNADKGFGFITPDDGS-KDVFVHFTAIQSNE-----FRTLNENQKVEFSIEQG 58 + G VKW++ +GFI DD DVFVH TAI + RTL + ++V F I QG Sbjct: 6 VKGKVKWYSVRYHYGFIARDDNKGNDVFVHQTAIAKSRIIKYYLRTLGDGEEVLFDIVQG 65 Query: 59 QRGPAAANVV 68 ++GP AANV Sbjct: 66 KQGPEAANVT 75 >UniRef50_UPI00017B0A95 UPI00017B0A95 related cluster n=1 Tax=Tetraodon nigroviridis RepID=UPI00017B0A95 Length = 321 Score = 55.5 bits (132), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 31/69 (44%), Positives = 42/69 (60%), Gaps = 5/69 (7%) Query: 5 MTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNE----FRTLNENQKVEFS-IEQGQ 59 + G VKWFN G+GFI +D +DVFVH TAI+ N R++ + + VEF IE + Sbjct: 30 VQGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKRNNPRKFLRSVGDGELVEFDVIEAAK 89 Query: 60 RGPAAANVV 68 +G AANV Sbjct: 90 KGSEAANVT 98 >UniRef50_C6C161 Cold-shock DNA-binding domain protein n=1 Tax=Desulfovibrio salexigens DSM 2638 RepID=C6C161_DESAD Length = 69 Score = 55.5 bits (132), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 25/63 (39%), Positives = 38/63 (60%), Gaps = 1/63 (1%) Query: 5 MTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPAA 64 + G+V WFN KGFGFI D+ +D++VH++ + + F+TLN +KV F + P A Sbjct: 3 LKGVVSWFNDIKGFGFIV-DEAGRDIYVHYSEVLRDGFKTLNVGEKVVFEVIDEDTAPKA 61 Query: 65 ANV 67 V Sbjct: 62 TAV 64 >UniRef50_B9T6D3 Cellular nucleic acid binding protein, putative n=1 Tax=Ricinus communis RepID=B9T6D3_RICCO Length = 266 Score = 55.1 bits (131), Expect = 6e-07, Method: Composition-based stats. Identities = 26/50 (52%), Positives = 37/50 (74%), Gaps = 1/50 (2%) Query: 7 GLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSN-EFRTLNENQKVEFSI 55 G V F+ KGFGFI PDDG +D+FVH +AI+S+ +R+L E+ VEF++ Sbjct: 16 GKVVRFSDRKGFGFIKPDDGGEDLFVHHSAIKSDGRYRSLAEDDVVEFTV 65 >UniRef50_Q23960 Y-box protein n=1 Tax=Dugesia japonica RepID=Q23960_DUGJA Length = 266 Score = 55.1 bits (131), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 27/70 (38%), Positives = 46/70 (65%), Gaps = 4/70 (5%) Query: 5 MTGLVKWFNADKGFGFITPDDGSKDVFVHFTAI-QSN---EFRTLNENQKVEFSIEQGQR 60 +TG VKWFN +G+GF+ +D +D+F+H +AI +SN +++ E +++ F I +G + Sbjct: 29 ITGKVKWFNVKRGYGFVCRNDNQEDIFIHQSAIVKSNPDHPRKSVGEGEEILFDIVKGAK 88 Query: 61 GPAAANVVTL 70 G AANV + Sbjct: 89 GNEAANVSAI 98 >UniRef50_A5V9E9 Cold-shock DNA-binding protein family n=2 Tax=cellular organisms RepID=A5V9E9_SPHWW Length = 198 Score = 54.7 bits (130), Expect = 8e-07, Method: Compositional matrix adjust. Identities = 24/69 (34%), Positives = 38/69 (55%) Query: 2 SNKMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRG 61 + + G VKWF+A +GFGFI D DV VHF+ ++ + RTL E ++ + RG Sbjct: 31 AETVVGAVKWFDATRGFGFIATDGDRGDVLVHFSVLRDHGRRTLPEGARIACEVVARDRG 90 Query: 62 PAAANVVTL 70 A ++ + Sbjct: 91 LQARRILAI 99 Score = 52.0 bits (123), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 20/62 (32%), Positives = 37/62 (59%) Query: 8 LVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPAAANV 67 +VKWFN KG+GF+ D ++D+F+H ++ L +++ I +G++GP A + Sbjct: 136 IVKWFNRLKGYGFLVRDGETQDIFIHMETVRRAGLPDLLPETRMKARIAEGRKGPLAVEL 195 Query: 68 VT 69 +T Sbjct: 196 IT 197 >UniRef50_C6A7D6 Cold shock protein n=5 Tax=Bifidobacteriaceae RepID=C6A7D6_BIFLB Length = 147 Score = 54.7 bits (130), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 29/68 (42%), Positives = 41/68 (60%), Gaps = 2/68 (2%) Query: 3 NKMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGP 62 N +G ++WF+A KG+GFI DDG KDVF+ TA+ R + KVE+S+ +G RG Sbjct: 18 NMPSGRIRWFDAKKGYGFIAGDDG-KDVFLPQTALPQG-VRNPRKGAKVEYSVIEGNRGQ 75 Query: 63 AAANVVTL 70 A V + Sbjct: 76 VAMGVTMV 83 >UniRef50_UPI0001B5872A cold-shock DNA-binding domain protein n=1 Tax=Streptomyces sp. C RepID=UPI0001B5872A Length = 71 Score = 54.3 bits (129), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 23/35 (65%), Positives = 28/35 (80%) Query: 6 TGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSN 40 TG VKWFN++KGFGFI+ DDG DVFVHF+ I + Sbjct: 3 TGTVKWFNSEKGFGFISQDDGGPDVFVHFSPIPGD 37 >UniRef50_A7BYF1 Putative uncharacterized protein n=1 Tax=Beggiatoa sp. PS RepID=A7BYF1_9GAMM Length = 189 Score = 53.9 bits (128), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 29/64 (45%), Positives = 40/64 (62%), Gaps = 2/64 (3%) Query: 5 MTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPAA 64 M G+V F+ +GFGFI D S+DVFVH I+ + +L+ QKVEF EQ +G +A Sbjct: 1 MEGIVVKFDKKRGFGFIRSDKFSEDVFVHLKNIREQQ--SLSPGQKVEFDTEQTDKGLSA 58 Query: 65 ANVV 68 NV+ Sbjct: 59 INVI 62 >UniRef50_D2RAW4 Cold-shock DNA-binding domain protein n=2 Tax=Bifidobacteriaceae RepID=D2RAW4_GARVA Length = 129 Score = 53.9 bits (128), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 25/58 (43%), Positives = 40/58 (68%), Gaps = 2/58 (3%) Query: 7 GLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPAA 64 G V+W++ KG+GFI DDG KDVF+ A+ ++L++ +VEFS+ +G++GP A Sbjct: 4 GRVRWYDTQKGYGFIVGDDG-KDVFLPAAALPVT-VKSLHKGTRVEFSVIEGRKGPQA 59 >UniRef50_B7RPT8 Cold shock protein n=1 Tax=Roseobacter sp. GAI101 RepID=B7RPT8_9RHOB Length = 182 Score = 53.9 bits (128), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 22/62 (35%), Positives = 37/62 (59%) Query: 6 TGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPAAA 65 TGLVKWF+ KGFGF+ D+G D+ +H +++ ++ + ++E + + QRG A Sbjct: 12 TGLVKWFDPAKGFGFVVSDEGGPDILLHVNVLRNYGQSSVADGARIELTAHETQRGVQAT 71 Query: 66 NV 67 V Sbjct: 72 QV 73 Score = 42.7 bits (99), Expect = 0.003, Method: Compositional matrix adjust. Identities = 20/59 (33%), Positives = 30/59 (50%) Query: 9 VKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPAAANV 67 VKWF+ KGFGF S D+F+H ++ + L + + + G+RG AA V Sbjct: 108 VKWFDKSKGFGFANVFGRSDDIFLHIEVLRQSGLSDLQPGEALALRVIMGERGHMAAEV 166 >UniRef50_Q03EZ0 Cold-shock DNA-binding protein family n=1 Tax=Pediococcus pentosaceus ATCC 25745 RepID=Q03EZ0_PEDPA Length = 69 Score = 53.9 bits (128), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 26/62 (41%), Positives = 38/62 (61%), Gaps = 1/62 (1%) Query: 6 TGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPAAA 65 TG V+ F+ +KG+GFI G K VF H+T IQS +++TL +KV+ + G +G A Sbjct: 3 TGTVESFDKEKGYGFIETASGDK-VFAHYTVIQSEDYKTLEVGEKVKLMLADGPKGLIAV 61 Query: 66 NV 67 V Sbjct: 62 KV 63 >UniRef50_Q1AY27 Cold-shock DNA-binding protein family n=10 Tax=Bacteria RepID=Q1AY27_RUBXD Length = 69 Score = 53.9 bits (128), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 26/57 (45%), Positives = 37/57 (64%), Gaps = 4/57 (7%) Query: 7 GLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFS---IEQGQR 60 G VKWF+ +KGFGFI + G ++V VH+T I+ FR L E +VE++ E G+R Sbjct: 4 GRVKWFSGEKGFGFIETESG-EEVLVHYTEIKGEGFRALEEGAEVEYAAVKTEDGRR 59 >UniRef50_C9NB66 Cold-shock DNA-binding domain protein n=1 Tax=Streptomyces flavogriseus ATCC 33331 RepID=C9NB66_9ACTO Length = 70 Score = 53.9 bits (128), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 26/61 (42%), Positives = 35/61 (57%) Query: 7 GLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPAAAN 66 G V+ F+A+KG+G+I P G ++ VHF+AI L Q V F I Q +RGP A Sbjct: 4 GTVQVFSAEKGYGYIRPSTGGPEIIVHFSAIVEACPVGLVAGQTVSFDIVQRRRGPEAER 63 Query: 67 V 67 V Sbjct: 64 V 64 >UniRef50_B9JBF9 Cold shock protein n=1 Tax=Agrobacterium radiobacter K84 RepID=B9JBF9_AGRRK Length = 68 Score = 53.5 bits (127), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 26/64 (40%), Positives = 39/64 (60%) Query: 7 GLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPAAAN 66 G+VK F+ +KG+GFI P DGS +FVH + + TL + QK+ F IEQ G ++ + Sbjct: 4 GIVKNFDLEKGYGFIQPTDGSVAIFVHAKIVVKSGLETLKKGQKLIFEIEQDGMGRSSIS 63 Query: 67 VVTL 70 + L Sbjct: 64 KLRL 67 >UniRef50_B8BT01 Predicted protein (Fragment) n=1 Tax=Thalassiosira pseudonana CCMP1335 RepID=B8BT01_THAPS Length = 50 Score = 53.5 bits (127), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 25/52 (48%), Positives = 36/52 (69%), Gaps = 2/52 (3%) Query: 5 MTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIE 56 +TG VKW+NA++GFGFI DDG D++VH T + + L EN++V F+ E Sbjct: 1 VTGTVKWYNAERGFGFIAIDDGGADMYVHATGLTFD--GPLIENERVGFTTE 50 >UniRef50_Q4SGH3 Chromosome undetermined SCAF14594, whole genome shotgun sequence. (Fragment) n=1 Tax=Tetraodon nigroviridis RepID=Q4SGH3_TETNG Length = 179 Score = 53.5 bits (127), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 27/69 (39%), Positives = 39/69 (56%), Gaps = 7/69 (10%) Query: 6 TGLVKWFNADKGFGFIT-------PDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQG 58 +G+ KWFN GFGFI+ P D + DVFVH + + FR+L E + +EFS ++ Sbjct: 5 SGVCKWFNMRMGFGFISMSSRDGAPLDQNLDVFVHQSKLHMEGFRSLREGEALEFSFKKS 64 Query: 59 QRGPAAANV 67 +G A V Sbjct: 65 SKGLEAVRV 73 >UniRef50_Q2RZT3 Conserved domain protein n=2 Tax=Salinibacter ruber DSM 13855 RepID=Q2RZT3_SALRD Length = 75 Score = 53.1 bits (126), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 27/65 (41%), Positives = 40/65 (61%), Gaps = 5/65 (7%) Query: 7 GLVKWFNADKGFGFITPDDGSKDVFVH---FTAIQSNEFRTLNENQKVEFSIEQGQRGPA 63 G +K+F+ +GFGFI P DGS+DVF+H + + S E L E Q +E+ EQ ++G + Sbjct: 4 GKLKFFDTSRGFGFIEPLDGSEDVFLHANNISGMTSGE--DLREGQTIEYETEQTEKGLS 61 Query: 64 AANVV 68 A N Sbjct: 62 ALNAA 66 >UniRef50_Q5YWN3 Putative cold shock protein n=1 Tax=Nocardia farcinica RepID=Q5YWN3_NOCFA Length = 130 Score = 53.1 bits (126), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 25/56 (44%), Positives = 35/56 (62%), Gaps = 1/56 (1%) Query: 12 FNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPAAANV 67 F++ +GFGFI P+DG DVFVH I +E L + + EF + +G RGP A N+ Sbjct: 11 FDSSRGFGFIRPEDGGPDVFVHVNDIGLDE-DELRQGRVFEFDVTEGDRGPKAINL 65 >UniRef50_B4RAZ9 Cold-shock DNA-binding domain protein n=6 Tax=Caulobacteraceae RepID=B4RAZ9_PHEZH Length = 202 Score = 52.8 bits (125), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 27/71 (38%), Positives = 41/71 (57%), Gaps = 4/71 (5%) Query: 4 KMTGLVKWFNADKGFGFITPDDGS----KDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQ 59 ++TG VKWF+A KG+GFI PDD + KDV +H T+++S+ E + + + Sbjct: 26 RITGRVKWFDAGKGYGFIVPDDPAQTDLKDVLLHVTSLRSSGREHCLEGSLITCDVVRRP 85 Query: 60 RGPAAANVVTL 70 +G A VV L Sbjct: 86 KGWQVAEVVDL 96 Score = 44.3 bits (103), Expect = 0.001, Method: Compositional matrix adjust. Identities = 19/59 (32%), Positives = 29/59 (49%) Query: 9 VKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPAAANV 67 VKWFN KG+GF+ D D+FVH ++ + L + V +G +G A + Sbjct: 138 VKWFNRAKGYGFVIRDSQPGDIFVHIETLRRSGMEDLQPGENVMVRFAEGPKGLVVAEI 196 >UniRef50_Q013V8 Glycogen debranching enzyme (ISS) n=1 Tax=Ostreococcus tauri RepID=Q013V8_OSTTA Length = 141 Score = 52.8 bits (125), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 26/70 (37%), Positives = 41/70 (58%), Gaps = 13/70 (18%) Query: 9 VKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNE------NQKVEFSIEQGQR-- 60 V WFN +G+G++ P DGS+DVFVH + +Q + FR++ E ++EF ++ +R Sbjct: 44 VTWFNCVRGYGYVRPHDGSEDVFVHQSELQMDGFRSVWEVRLQQAGDEIEFELDDDERRR 103 Query: 61 -----GPAAA 65 GPA A Sbjct: 104 AKNVTGPAGA 113 >UniRef50_C0WXT4 Cold shock protein Csp n=3 Tax=Lactobacillus fermentum RepID=C0WXT4_LACFE Length = 70 Score = 52.0 bits (123), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 27/63 (42%), Positives = 38/63 (60%), Gaps = 3/63 (4%) Query: 9 VKWFNADKGFGFIT-PDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPAAANV 67 +K ++ KG+G+IT P DG DV+ H AI+ + + Q VE I QGQRGP AA+V Sbjct: 6 IKSYDPTKGWGYITTPQDG--DVYFHRRAIEGRSRVPIQKGQAVEMVIVQGQRGPQAAHV 63 Query: 68 VTL 70 + Sbjct: 64 TII 66 >UniRef50_A6ESQ3 Cold shock protein n=2 Tax=Bacteroidetes RepID=A6ESQ3_9BACT Length = 63 Score = 52.0 bits (123), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 27/64 (42%), Positives = 38/64 (59%), Gaps = 4/64 (6%) Query: 7 GLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPAAAN 66 G+VK+FN KGFGFIT + KD FVH + + + E +VEF +++G +G A N Sbjct: 4 GIVKFFNDSKGFGFITEEGQEKDHFVHISGL----IDEVREGDEVEFELKEGNKGLNAVN 59 Query: 67 VVTL 70 V L Sbjct: 60 VRVL 63 >UniRef50_D1S746 Cold-shock DNA-binding domain protein n=1 Tax=Micromonospora aurantiaca ATCC 27029 RepID=D1S746_9ACTO Length = 165 Score = 52.0 bits (123), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 26/63 (41%), Positives = 37/63 (58%), Gaps = 1/63 (1%) Query: 5 MTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPAA 64 +TG V F+ +G+GFI PDDGS DVFVH + +++ L VE+ + +RGP A Sbjct: 8 LTGKVVRFDEVRGYGFIAPDDGSDDVFVHANMLDGDKW-ALTPGVPVEYDAVETERGPKA 66 Query: 65 ANV 67 V Sbjct: 67 VLV 69 >UniRef50_A0ACJ4 Putative DNA-binding protein n=2 Tax=Streptomyces RepID=A0ACJ4_STRAM Length = 172 Score = 52.0 bits (123), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 25/62 (40%), Positives = 38/62 (61%), Gaps = 1/62 (1%) Query: 6 TGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPAAA 65 G + F+ +G+GFI PD+G +DVF+H + ++ R L KVEF +E+G RG A+ Sbjct: 8 VGKIIRFDEFRGYGFIAPDNGGEDVFIHVNDLAFDK-RLLGPGMKVEFDVEEGDRGLKAS 66 Query: 66 NV 67 V Sbjct: 67 RV 68 >UniRef50_P92186 Protein lin-28 n=5 Tax=Caenorhabditis RepID=LIN28_CAEEL Length = 227 Score = 52.0 bits (123), Expect = 6e-06, Method: Composition-based stats. Identities = 21/55 (38%), Positives = 34/55 (61%) Query: 7 GLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRG 61 G KWFN KG+GF+ D +D+FVH + + FR+L+E ++V + I++ G Sbjct: 55 GSCKWFNVSKGYGFVIDDITGEDLFVHQSNLNMQGFRSLDEGERVSYYIQERSNG 109 >UniRef50_Q9XTJ6 Protein Y39A1C.3, confirmed by transcript evidence n=2 Tax=Caenorhabditis RepID=Q9XTJ6_CAEEL Length = 294 Score = 51.6 bits (122), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 29/72 (40%), Positives = 42/72 (58%), Gaps = 8/72 (11%) Query: 5 MTGLVKWFNADKGFGFIT---PDDGSKDVFVHFTAIQSNE-----FRTLNENQKVEFSIE 56 + G VKWF+ +GF+ P D ++D FVH TAI + RTL++++ V F I Sbjct: 89 VKGHVKWFSVRGRYGFVARDKPTDENEDFFVHQTAITKSSTIKFYLRTLDDDEPVVFDIV 148 Query: 57 QGQRGPAAANVV 68 +G +GP AANV Sbjct: 149 EGLKGPEAANVT 160 >UniRef50_Q1AWL7 Cold-shock DNA-binding protein family n=2 Tax=cellular organisms RepID=Q1AWL7_RUBXD Length = 197 Score = 51.6 bits (122), Expect = 9e-06, Method: Compositional matrix adjust. Identities = 24/69 (34%), Positives = 42/69 (60%), Gaps = 2/69 (2%) Query: 2 SNKMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRG 61 S + G VKWF+ +KG+GF+ G +D+FVH + ++ + +L + +VE+ + + +RG Sbjct: 131 SQREQGRVKWFDPEKGYGFLV-RPGGEDLFVHHSEVEGD-ASSLGQGVEVEYEVGRNERG 188 Query: 62 PAAANVVTL 70 P A V L Sbjct: 189 PNARRVRVL 197 >UniRef50_B9K345 CspA-like protein n=3 Tax=Agrobacterium RepID=B9K345_AGRVS Length = 99 Score = 51.2 bits (121), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 22/56 (39%), Positives = 33/56 (58%), Gaps = 1/56 (1%) Query: 6 TGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSI-EQGQR 60 TG +KWF+ KG+GFIT DDG DVF+H + + TL ++ + + QG + Sbjct: 3 TGKLKWFDTTKGYGFITSDDGGPDVFLHLSKVTEANLPTLQPGVRLRYVLGRQGNK 58 >UniRef50_Q17JD9 Putative uncharacterized protein n=1 Tax=Aedes aegypti RepID=Q17JD9_AEDAE Length = 192 Score = 51.2 bits (121), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 26/58 (44%), Positives = 37/58 (63%), Gaps = 4/58 (6%) Query: 2 SNKMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAI---QSNEF-RTLNENQKVEFSI 55 S ++TG VKWFNA GFGFIT D +D+FVH + I N F +++ + + VEF + Sbjct: 31 SKRITGTVKWFNAKDGFGFITRHDTGEDIFVHKSCIFKPNRNHFTKSIGDGEIVEFGL 88 >UniRef50_B0W4X1 Putative uncharacterized protein n=1 Tax=Culex quinquefasciatus RepID=B0W4X1_CULQU Length = 247 Score = 51.2 bits (121), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 24/56 (42%), Positives = 35/56 (62%), Gaps = 4/56 (7%) Query: 4 KMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAI----QSNEFRTLNENQKVEFSI 55 ++TG VKWFN GFGFIT D +D+FVH ++I + R++ E + VEF + Sbjct: 51 RITGTVKWFNVKDGFGFITRHDTGEDLFVHQSSILRPNSRHSVRSVGEGEVVEFGV 106 >UniRef50_Q4Z464 Cold-shock protein, putative (Fragment) n=2 Tax=Plasmodium (Vinckeia) RepID=Q4Z464_PLABE Length = 84 Score = 50.8 bits (120), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 26/50 (52%), Positives = 34/50 (68%), Gaps = 1/50 (2%) Query: 2 SNKMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAI-QSNEFRTLNENQK 50 +NK+TG V F+ KG+GFI P+DG DVFVH+T I Q+ F NE +K Sbjct: 28 NNKITGNVIKFDKRKGYGFIKPNDGGPDVFVHYTEICQNRSFSVTNEEKK 77 >UniRef50_C0CRT9 Putative uncharacterized protein n=1 Tax=Blautia hydrogenotrophica DSM 10507 RepID=C0CRT9_9FIRM Length = 77 Score = 50.8 bits (120), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 24/63 (38%), Positives = 39/63 (61%), Gaps = 1/63 (1%) Query: 7 GLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPAAAN 66 G VKWF+ KG+GFI D+G K+ FVH + I FR L ++V + ++ ++G A + Sbjct: 15 GTVKWFDPVKGYGFIAGDNG-KETFVHQSDILMRGFRHLETGERVSYRVKATEKGDKAID 73 Query: 67 VVT 69 V++ Sbjct: 74 VIS 76 >UniRef50_Q8I248 Cold-shock protein, putative n=2 Tax=Plasmodium RepID=Q8I248_PLAF7 Length = 150 Score = 50.8 bits (120), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 25/49 (51%), Positives = 33/49 (67%), Gaps = 1/49 (2%) Query: 3 NKMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAI-QSNEFRTLNENQK 50 +K+TG V F+ KG+GFI P+DG D+FVH+T I QS F NE +K Sbjct: 28 DKITGNVIMFDKRKGYGFIKPNDGGPDIFVHYTDICQSRTFEVTNEEKK 76 >UniRef50_Q6ZN17 Protein lin-28 homolog B n=13 Tax=Tetrapoda RepID=LN28B_HUMAN Length = 250 Score = 50.8 bits (120), Expect = 1e-05, Method: Composition-based stats. Identities = 26/63 (41%), Positives = 35/63 (55%), Gaps = 7/63 (11%) Query: 6 TGLVKWFNADKGFGFIT-------PDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQG 58 TG KWFN GFGFI+ P D DVFVH + + FR+L E + VEF+ ++ Sbjct: 31 TGHCKWFNVRMGFGFISMINREGSPLDIPVDVFVHQSKLFMEGFRSLKEGEPVEFTFKKS 90 Query: 59 QRG 61 +G Sbjct: 91 SKG 93 >UniRef50_D0LBW3 Cold-shock protein DNA-binding protein n=2 Tax=Corynebacterineae RepID=D0LBW3_GORB4 Length = 164 Score = 50.4 bits (119), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 24/64 (37%), Positives = 37/64 (57%), Gaps = 1/64 (1%) Query: 5 MTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPAA 64 ++G V ++ ++GFGF+ P+ G DVF+H I +E +L KV F +E+ RG A Sbjct: 7 VSGKVVHYDTNRGFGFLAPESGGADVFLHINDIDIDES-SLKPGAKVSFDVEETDRGAKA 65 Query: 65 ANVV 68 NV Sbjct: 66 VNVA 69 >UniRef50_C2E292 Cold-shock protein n=9 Tax=Lactobacillus RepID=C2E292_9LACO Length = 73 Score = 50.4 bits (119), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 24/62 (38%), Positives = 36/62 (58%) Query: 6 TGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPAAA 65 TG VK F++ GFGFI D FV +TAI+ +++L Q+V + + QG++G Sbjct: 3 TGTVKQFDSAAGFGFIDDDLTKASYFVFYTAIKEAGYKSLEIGQRVRYQLAQGKKGLQCI 62 Query: 66 NV 67 NV Sbjct: 63 NV 64 >UniRef50_B2IBA0 Cold-shock DNA-binding domain protein n=2 Tax=Rhizobiales RepID=B2IBA0_BEII9 Length = 205 Score = 50.4 bits (119), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 23/62 (37%), Positives = 36/62 (58%) Query: 9 VKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPAAANVV 68 VKWFN KGFGF++ DG++D+FVH ++ + L+ +++ QG +G A V Sbjct: 136 VKWFNRVKGFGFLSRGDGTEDIFVHMEILRRHGISILHPGEELRARFGQGPKGLIAIEVR 195 Query: 69 TL 70 L Sbjct: 196 PL 197 Score = 47.0 bits (110), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 21/67 (31%), Positives = 38/67 (56%) Query: 4 KMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPA 63 +++G +KWF+ KG+GF+ D+G DV +H TA++ + E +V +G +G Sbjct: 32 EISGRIKWFDLVKGYGFVVADNGLGDVLLHVTALRKDGHSKACEGARVVCEAMRGTKGWQ 91 Query: 64 AANVVTL 70 V++L Sbjct: 92 VFRVISL 98 >UniRef50_Q11SL0 Cold-shock DNA-binding protein family n=4 Tax=Bacteroidetes RepID=Q11SL0_CYTH3 Length = 63 Score = 50.1 bits (118), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 27/61 (44%), Positives = 38/61 (62%), Gaps = 4/61 (6%) Query: 7 GLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPAAAN 66 G VK+FN KGFGFI + K+ FVH + + +E R EN +V F +E+G++G A N Sbjct: 4 GTVKFFNNSKGFGFIIEKESGKEYFVHVSGL-VDEIR---ENDEVTFELEKGKKGLNAVN 59 Query: 67 V 67 V Sbjct: 60 V 60 >UniRef50_D2H5S2 Putative uncharacterized protein (Fragment) n=2 Tax=Caniformia RepID=D2H5S2_AILME Length = 276 Score = 50.1 bits (118), Expect = 2e-05, Method: Composition-based stats. Identities = 26/63 (41%), Positives = 35/63 (55%), Gaps = 7/63 (11%) Query: 6 TGLVKWFNADKGFGFIT-------PDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQG 58 TG KWFN GFGFI+ P D DVFVH + + FR+L E + VEF+ ++ Sbjct: 57 TGHCKWFNVRMGFGFISMINREGSPLDIPVDVFVHQSKLFMEGFRSLKEGEPVEFTFKKS 116 Query: 59 QRG 61 +G Sbjct: 117 SKG 119 >UniRef50_C4RFH3 DNA binding protein n=1 Tax=Micromonospora sp. ATCC 39149 RepID=C4RFH3_9ACTO Length = 150 Score = 50.1 bits (118), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 25/66 (37%), Positives = 36/66 (54%), Gaps = 1/66 (1%) Query: 5 MTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPAA 64 +TG V F+ +G+GFI PD G DVFVH + +++ L VE+ + +RGP A Sbjct: 2 LTGRVVRFDEVRGYGFIAPDGGGDDVFVHANTVDGDKW-ALGPGVPVEYEAVENERGPKA 60 Query: 65 ANVVTL 70 V L Sbjct: 61 LTVRVL 66 >UniRef50_A4A3Y7 Cold-shock domain family protein n=2 Tax=unclassified Gammaproteobacteria RepID=A4A3Y7_9GAMM Length = 189 Score = 49.7 bits (117), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 25/64 (39%), Positives = 35/64 (54%), Gaps = 1/64 (1%) Query: 7 GLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPAAAN 66 G VKWFN KGFGFI ++G ++FVH +I R+L + V + + +GP A Sbjct: 126 GTVKWFNGTKGFGFIIRENGD-EIFVHHRSIIGEGRRSLRDGAPVRYRVVTTDKGPQAEE 184 Query: 67 VVTL 70 V L Sbjct: 185 VEAL 188 >UniRef50_Q1ZUW9 Predicted membrane protein n=2 Tax=Photobacterium RepID=Q1ZUW9_PHOAS Length = 204 Score = 49.7 bits (117), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 24/62 (38%), Positives = 37/62 (59%), Gaps = 2/62 (3%) Query: 8 LVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPAAANV 67 ++ W N KGFGFI PD+G +DVF H +A+ + R N+ + F I + ++G +A Sbjct: 7 IISW-NQQKGFGFIAPDNGEQDVFFHVSALPDKQCRP-RINEAITFCIGKDKKGRMSATT 64 Query: 68 VT 69 VT Sbjct: 65 VT 66 >UniRef50_A0JVQ8 Putative cold-shock DNA-binding domain protein n=1 Tax=Arthrobacter sp. FB24 RepID=A0JVQ8_ARTS2 Length = 178 Score = 49.7 bits (117), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 20/42 (47%), Positives = 28/42 (66%) Query: 7 GLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNEN 48 G V F+A+KG G I PDDGS+ V +H+T+I ++R L N Sbjct: 137 GAVLRFHAEKGLGIIVPDDGSEVVLLHYTSIVGVKYRVLRRN 178 >UniRef50_A3VSH0 Cold shock protein n=1 Tax=Parvularcula bermudensis HTCC2503 RepID=A3VSH0_9PROT Length = 173 Score = 49.7 bits (117), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 22/69 (31%), Positives = 38/69 (55%) Query: 2 SNKMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRG 61 S ++ G VKWF+ KG+GFIT + G +DV +H + ++ + T E V + ++G Sbjct: 11 SREIRGFVKWFDQTKGYGFITDEAGGRDVLIHSSCLKQSGRATAPEGAIVTCEAIESEKG 70 Query: 62 PAAANVVTL 70 A ++ L Sbjct: 71 LQATRIINL 79 Score = 48.1 bits (113), Expect = 8e-05, Method: Compositional matrix adjust. Identities = 20/59 (33%), Positives = 35/59 (59%) Query: 9 VKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPAAANV 67 VKWF+ KG+GF+T + ++D+FVH +++ L Q++ S +G +G AA + Sbjct: 109 VKWFSRAKGYGFLTATNANEDIFVHMEVVRAAGLSELQPGQRLRASYGRGTKGLLAAAI 167 >UniRef50_Q0APJ7 Cold-shock DNA-binding protein family n=1 Tax=Maricaulis maris MCS10 RepID=Q0APJ7_MARMM Length = 174 Score = 49.7 bits (117), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 20/60 (33%), Positives = 35/60 (58%) Query: 8 LVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPAAANV 67 +VKWF+A +G+GF+T D+ DVF+H ++ F + ++E +G +G AA + Sbjct: 109 VVKWFDALRGYGFVTCDNVEGDVFLHAATLRRAGFEDIQPGDRIEVRCVEGPKGALAAEI 168 Score = 42.7 bits (99), Expect = 0.003, Method: Compositional matrix adjust. Identities = 19/67 (28%), Positives = 34/67 (50%) Query: 4 KMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPA 63 ++ G VKW++ +G+GFI DG D+ +H + ++ N K+ QG +G Sbjct: 15 ELEGRVKWYDPARGYGFIDASDGEGDILLHASCLRRFGQGPALPNAKIVCKAVQGDKGRQ 74 Query: 64 AANVVTL 70 A +V + Sbjct: 75 AVELVEM 81 >UniRef50_C7HUZ9 Conserved domain protein n=2 Tax=Anaerococcus RepID=C7HUZ9_9FIRM Length = 68 Score = 49.7 bits (117), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 27/65 (41%), Positives = 40/65 (61%), Gaps = 3/65 (4%) Query: 4 KMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNE-FRTLNENQKVEFSIEQGQRGP 62 KM G VK+F+ KGFGFI + G D F H++ I S++ ++T+ +VEF ++ RG Sbjct: 2 KMEGKVKFFDNKKGFGFIESESG--DYFFHYSEIISDKVYKTIENGARVEFDVKDFGRGD 59 Query: 63 AAANV 67 A NV Sbjct: 60 TAFNV 64 >UniRef50_A1B0C7 Cold-shock DNA-binding protein family n=28 Tax=Rhodobacterales RepID=A1B0C7_PARDP Length = 197 Score = 49.3 bits (116), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 23/68 (33%), Positives = 38/68 (55%) Query: 3 NKMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGP 62 K+ G+VKWF+ KGFGF+T DG D+ +H +++ ++ E V I++ RG Sbjct: 9 RKIAGVVKWFDGSKGFGFLTDPDGGADILLHANVLRNFGQSSVAEGSHVIAIIQKTPRGM 68 Query: 63 AAANVVTL 70 A V+ + Sbjct: 69 QAVEVLEI 76 Score = 42.7 bits (99), Expect = 0.003, Method: Compositional matrix adjust. Identities = 20/61 (32%), Positives = 32/61 (52%) Query: 9 VKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPAAANVV 68 VKWF+ KGFGF DVF+H ++ + F L + + + G+RG AA ++ Sbjct: 108 VKWFDKAKGFGFANIFADKADVFLHVEVLRHSGFADLAVGEAIALRVVDGRRGMMAAQIL 167 Query: 69 T 69 + Sbjct: 168 S 168 >UniRef50_C6XG83 Cold shock protein n=1 Tax=Candidatus Liberibacter asiaticus str. psy62 RepID=C6XG83_LIBAP Length = 78 Score = 49.3 bits (116), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 23/54 (42%), Positives = 33/54 (61%), Gaps = 3/54 (5%) Query: 7 GLVKWFNADKGFGFITPDDGSK---DVFVHFTAIQSNEFRTLNENQKVEFSIEQ 57 G +KW+N DKG+GFITP+ ++ DVF+H +A+ S L E Q V + Q Sbjct: 5 GSIKWYNPDKGYGFITPEGSTESGDDVFLHRSAVASAGLFNLTEGQLVTYDYVQ 58 >UniRef50_A3WZM6 Cold shock DNA binding protein n=1 Tax=Nitrobacter sp. Nb-311A RepID=A3WZM6_9BRAD Length = 77 Score = 48.5 bits (114), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 22/70 (31%), Positives = 38/70 (54%), Gaps = 1/70 (1%) Query: 1 MSNKMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQR 60 S K G V +NA++GFGF+ D +++FVH + + + +L Q++EF I + +R Sbjct: 6 CSVKYRGTVVHWNAERGFGFVQRDTDQREIFVHISEV-DEAYESLVLGQRIEFEIAESER 64 Query: 61 GPAAANVVTL 70 P V + Sbjct: 65 KPGHPKCVNV 74 >UniRef50_Q28PH1 Cold-shock DNA-binding protein family n=11 Tax=Rhodobacterales RepID=Q28PH1_JANSC Length = 181 Score = 48.5 bits (114), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 20/70 (28%), Positives = 37/70 (52%) Query: 1 MSNKMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQR 60 + + G+VKWF+ KGFGF+ D+G D+ +H ++S ++ E +V + R Sbjct: 18 ICPTVAGVVKWFDTTKGFGFVLSDEGGPDILLHANVLRSFGRGSIAEGARVMLRTQATGR 77 Query: 61 GPAAANVVTL 70 G A ++ + Sbjct: 78 GLQAVEIIAI 87 Score = 47.0 bits (110), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 25/61 (40%), Positives = 32/61 (52%) Query: 9 VKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPAAANVV 68 VKWF+ KGFGF S+DVFVH ++ + F L + V + G RG AA V Sbjct: 117 VKWFDKAKGFGFANVFGHSEDVFVHVEVLRRSGFTELQPGEAVAMKVVDGPRGRMAAEVR 176 Query: 69 T 69 T Sbjct: 177 T 177 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_P58726 Cold shock-like protein cspJ n=322 Tax=cellular ... 121 6e-27 UniRef50_Q88P68 Cold-shock domain family protein n=52 Tax=Bacter... 117 1e-25 UniRef50_P0A363 Cold shock-like protein cspB n=58 Tax=Enterobact... 117 2e-25 UniRef50_P36995 Cold shock-like protein cspB n=24 Tax=Bacteria R... 115 4e-25 UniRef50_Q7NT55 Cold shock transcription regulator protein n=1 T... 115 5e-25 UniRef50_P0A974 Cold shock-like protein cspE n=233 Tax=Gammaprot... 115 6e-25 UniRef50_A3BPB0 Putative uncharacterized protein n=4 Tax=Oryza s... 114 8e-25 UniRef50_Q4KEW6 Cold shock protein capa n=14 Tax=Bacteria RepID=... 114 8e-25 UniRef50_C9Y043 Cold shock-like protein cspD n=3 Tax=Enterobacte... 112 3e-24 UniRef50_B3PL56 Cold-shock protein CspD n=34 Tax=Bacteria RepID=... 112 4e-24 UniRef50_B5Y9M2 Conserved domain protein n=20 Tax=Bacteria RepID... 112 5e-24 UniRef50_Q08VT0 Conserved domain protein n=3 Tax=Bacteria RepID=... 111 6e-24 UniRef50_D1IX09 Whole genome shotgun sequence of line PN40024, s... 111 9e-24 UniRef50_O30875 Major cold shock protein n=98 Tax=cellular organ... 110 1e-23 UniRef50_Q0JY13 Cold shock protein, DNA-binding n=2 Tax=Burkhold... 110 1e-23 UniRef50_A9IR63 Cold shock-like protein n=13 Tax=cellular organi... 110 2e-23 UniRef50_P0A9Y8 Cold shock-like protein cspC n=125 Tax=Enterobac... 110 2e-23 UniRef50_A4VNB0 Cold-shock DNA-binding protein n=75 Tax=Bacteria... 108 5e-23 UniRef50_A4G7K9 Cold shock protein CspD n=3 Tax=Bacteria RepID=A... 108 5e-23 UniRef50_A1JMC2 Cold shock-like protein cspD (Cold shock-like pr... 108 8e-23 UniRef50_A2SIM9 Cold-shock DNA-binding protein family n=16 Tax=P... 107 1e-22 UniRef50_C4WXL4 ACYPI009849 protein n=3 Tax=cellular organisms R... 106 2e-22 UniRef50_C7Q9X4 Cold-shock DNA-binding domain protein n=31 Tax=B... 106 2e-22 UniRef50_A4VMZ2 Cold shock protein CspA n=2 Tax=Gammaproteobacte... 106 2e-22 UniRef50_P62171 Cold shock-like protein cspC n=85 Tax=Bacteria R... 106 2e-22 UniRef50_Q1DBV4 Cold-shock protein CspA n=10 Tax=cellular organi... 106 3e-22 UniRef50_A5BWB0 Putative uncharacterized protein n=1 Tax=Vitis v... 106 3e-22 UniRef50_A4VLV8 Cold-shock protein CspD n=5 Tax=Gammaproteobacte... 105 4e-22 UniRef50_Q03A67 Cold-shock DNA-binding protein family n=16 Tax=F... 104 8e-22 UniRef50_B7C7U1 Putative uncharacterized protein n=1 Tax=Eubacte... 104 9e-22 UniRef50_Q2LY24 Cold shock protein n=11 Tax=Bacteria RepID=Q2LY2... 103 1e-21 UniRef50_C4Z3Q0 Cold shock protein (Beta-ribbon, CspA family) n=... 103 1e-21 UniRef50_B4S1R6 Stress response protein CspD n=5 Tax=cellular or... 103 1e-21 UniRef50_UPI000194E5B1 PREDICTED: Rous sarcoma virus transcripti... 103 2e-21 UniRef50_Q90650 Rous sarcoma virus transcription enhancer factor... 103 2e-21 UniRef50_A3Y9L0 Cold-shock DNA-binding domain protein n=2 Tax=Ma... 103 2e-21 UniRef50_Q2LQ45 Cold shock protein n=49 Tax=Bacteria RepID=Q2LQ4... 103 2e-21 UniRef50_A8QHS7 'Cold-shock' DNA-binding domain containing prote... 103 2e-21 UniRef50_Q3AFQ5 Cold shock protein CspC n=14 Tax=Bacteria RepID=... 103 2e-21 UniRef50_P71478 Cold shock protein 1 n=20 Tax=Firmicutes RepID=C... 102 3e-21 UniRef50_Q5HPE0 Cold shock protein cspA n=113 Tax=Bacteria RepID... 102 3e-21 UniRef50_P16989 DNA-binding protein A n=144 Tax=cellular organis... 102 3e-21 UniRef50_B3RZU4 Putative uncharacterized protein n=1 Tax=Trichop... 102 3e-21 UniRef50_A3XD40 Cold shock family protein n=5 Tax=Rhodobacterace... 102 4e-21 UniRef50_B7PM92 PIN domain-containing RNA-binding protein, putat... 102 4e-21 UniRef50_C9KNJ1 Conserved domain protein n=1 Tax=Mitsuokella mul... 102 4e-21 UniRef50_P0A970 Cold shock-like protein cspD n=101 Tax=Gammaprot... 102 5e-21 UniRef50_A1S709 Cold-shock DNA-binding protein family n=6 Tax=ce... 102 5e-21 UniRef50_Q81DK5 Cold shock-like protein cspE n=713 Tax=Bacteria ... 102 5e-21 UniRef50_Q1LCU6 Cold-shock DNA-binding protein family n=7 Tax=Pr... 102 6e-21 UniRef50_P54584 Cold shock protein n=9 Tax=Bacteria RepID=CSP_ARTGO 102 6e-21 UniRef50_B5HGK4 Cold shock protein n=10 Tax=Streptomyces RepID=B... 101 7e-21 UniRef50_P0A356 Cold shock-like protein cspLA n=163 Tax=root Rep... 101 7e-21 UniRef50_C6VN45 Cold shock protein CspC n=8 Tax=Firmicutes RepID... 101 8e-21 UniRef50_B0KQL2 Cold-shock DNA-binding domain protein n=2 Tax=Ga... 101 8e-21 UniRef50_Q9VRN5 Protein lin-28 homolog n=1 Tax=Drosophila melano... 101 8e-21 UniRef50_Q816H3 Cold shock-like protein cspD n=370 Tax=Bacteria ... 101 8e-21 UniRef50_P41824 Y-box factor homolog n=1 Tax=Aplysia californica... 101 9e-21 UniRef50_Q2P2A6 Major cold shock protein n=21 Tax=Gammaproteobac... 101 1e-20 UniRef50_A5VRM7 Cold-shock family protein n=37 Tax=Brucellaceae ... 100 1e-20 UniRef50_A0NEN6 AGAP006108-PA n=4 Tax=Culicimorpha RepID=A0NEN6_... 100 1e-20 UniRef50_Q9Y2T7 Y-box-binding protein 2 n=21 Tax=Tetrapoda RepID... 100 1e-20 UniRef50_Q01761 Cold shock-like protein 7.0 n=356 Tax=cellular o... 100 1e-20 UniRef50_O46173 Y-box protein n=14 Tax=cellular organisms RepID=... 100 2e-20 UniRef50_B5AU39 Y-box protein Lyb1 n=1 Tax=Lethenteron japonicum... 100 2e-20 UniRef50_B5X2B2 Y-box-binding protein 2-A n=1 Tax=Salmo salar Re... 100 2e-20 UniRef50_Q3IC55 Cold shock protein n=52 Tax=Bacteria RepID=Q3IC5... 100 2e-20 UniRef50_UPI000155BE86 PREDICTED: hypothetical protein, partial ... 100 2e-20 UniRef50_Q4FT63 Cold-shock DNA-binding protein family n=10 Tax=c... 100 2e-20 UniRef50_Q30QF0 Cold-shock DNA-binding protein family n=12 Tax=P... 100 2e-20 UniRef50_P72192 Temperature acclimation protein B (Fragment) n=8... 100 2e-20 UniRef50_A4RZ32 Predicted protein n=1 Tax=Ostreococcus lucimarin... 100 3e-20 UniRef50_UPI0001555D69 PREDICTED: similar to LD37574p, partial n... 100 3e-20 UniRef50_P27484 Glycine-rich protein 2 n=5 Tax=Viridiplantae Rep... 99 3e-20 UniRef50_Q0BPU3 Cold shock protein n=2 Tax=Alphaproteobacteria R... 99 4e-20 UniRef50_C1F531 Cold shock protein n=1 Tax=Acidobacterium capsul... 99 4e-20 UniRef50_A1U3R2 Cold-shock DNA-binding protein family n=3 Tax=Ma... 99 4e-20 UniRef50_A4XHY2 Cold-shock DNA-binding protein family n=3 Tax=ce... 99 4e-20 UniRef50_Q4ZRK5 Cold-shock protein, DNA-binding n=10 Tax=Pseudom... 99 5e-20 UniRef50_O54310 Cold shock-like protein n=7 Tax=Bacteria RepID=C... 99 5e-20 UniRef50_O67327 Cold shock-like protein n=2 Tax=Bacteria RepID=C... 99 5e-20 UniRef50_O13015 Y box protein 2 n=4 Tax=Clupeocephala RepID=O130... 99 5e-20 UniRef50_Q90WH1 Cold-shock domain protein (Fragment) n=4 Tax=Per... 99 5e-20 UniRef50_Q9AN51 Blr1947 protein n=2 Tax=Bradyrhizobium japonicum... 99 6e-20 UniRef50_B8C1C4 Cold-shock DNA-binding domain-containing protein... 99 6e-20 UniRef50_D0MDE8 Cold-shock DNA-binding domain protein n=1 Tax=Rh... 98 6e-20 UniRef50_B4U902 Cold-shock DNA-binding domain protein n=9 Tax=Ba... 98 7e-20 UniRef50_B5A4M3 Glycine-rich nucleic acid binding protein n=1 Ta... 98 8e-20 UniRef50_C5RTX4 Cold-shock DNA-binding domain protein n=13 Tax=c... 98 8e-20 UniRef50_D1C6U7 Cold-shock DNA-binding domain protein n=1 Tax=Sp... 98 8e-20 UniRef50_B4SCC3 Cold-shock DNA-binding domain protein n=4 Tax=ce... 98 9e-20 UniRef50_P95459 Major cold shock protein cspA n=33 Tax=cellular ... 98 9e-20 UniRef50_C8P136 Conserved domain protein n=6 Tax=Bacteria RepID=... 98 1e-19 UniRef50_O65639 Glycine-rich protein n=10 Tax=cellular organisms... 97 1e-19 UniRef50_C4QN75 Y box binding protein, putative n=10 Tax=cellula... 97 1e-19 UniRef50_C4QN73 Y box binding protein, putative n=4 Tax=Bilateri... 97 1e-19 UniRef50_Q5CVY2 Cold shock RNA binding domain of the OB fold (Fr... 97 1e-19 UniRef50_C0QFU1 CspA n=4 Tax=cellular organisms RepID=C0QFU1_DESAH 97 1e-19 UniRef50_UPI0000F32A39 PREDICTED: Bos taurus similar to transcri... 97 1e-19 UniRef50_C4FWF1 Putative uncharacterized protein n=1 Tax=Catonel... 97 2e-19 UniRef50_C4WSK9 ACYPI003867 protein n=1 Tax=Acyrthosiphon pisum ... 97 2e-19 UniRef50_UPI00017B0A95 UPI00017B0A95 related cluster n=1 Tax=Tet... 97 2e-19 UniRef50_Q1RLA8 Zinc finger protein n=1 Tax=Ciona intestinalis R... 97 2e-19 UniRef50_UPI000051480C PREDICTED: similar to ypsilon schachtel C... 97 2e-19 UniRef50_A1U1H2 Cold-shock DNA-binding protein family n=5 Tax=Ga... 97 2e-19 UniRef50_D1H869 Whole genome shotgun sequence of line PN40024, s... 97 2e-19 UniRef50_Q11GE9 Cold-shock DNA-binding protein family n=10 Tax=A... 97 2e-19 UniRef50_A5N624 CspA n=10 Tax=cellular organisms RepID=A5N624_CLOK5 96 2e-19 UniRef50_A8I8L3 Cold-shock DNA-binding domain n=1 Tax=Azorhizobi... 96 2e-19 UniRef50_B0UEI2 Cold-shock DNA-binding domain protein n=11 Tax=A... 96 3e-19 UniRef50_B0S1I2 Cold shock protein n=4 Tax=cellular organisms Re... 96 3e-19 UniRef50_A9W6T1 Cold-shock protein DNA-binding n=32 Tax=Bacteria... 96 4e-19 UniRef50_A4A3Y7 Cold-shock domain family protein n=2 Tax=unclass... 95 4e-19 UniRef50_Q1J0P4 Cold-shock DNA-binding domain protein n=9 Tax=Ba... 95 5e-19 UniRef50_D0LU49 Cold-shock DNA-binding domain protein n=1 Tax=Ha... 95 5e-19 UniRef50_D0KX28 Cold-shock DNA-binding domain protein n=1 Tax=Ha... 95 5e-19 UniRef50_Q0SKK0 Cold shock protein n=1 Tax=Rhodococcus jostii RH... 95 6e-19 UniRef50_A7HXE8 Putative cold-shock DNA-binding domain protein n... 95 6e-19 UniRef50_D1A5P8 Cold-shock DNA-binding domain protein n=33 Tax=A... 95 6e-19 UniRef50_O62213 Protein F33A8.3, confirmed by transcript evidenc... 95 7e-19 UniRef50_D0MCR5 Cold-shock DNA-binding domain protein n=1 Tax=Rh... 94 9e-19 UniRef50_P55390 Probable cold shock protein y4cH n=110 Tax=Prote... 94 9e-19 UniRef50_Q38896 Glycine-rich protein 2b n=125 Tax=cellular organ... 94 1e-18 UniRef50_UPI00004F1407 PREDICTED: similar to CSDA protein n=1 Ta... 94 1e-18 UniRef50_B3QZU5 Cold shock-like protein n=1 Tax=Candidatus Phyto... 94 1e-18 UniRef50_B9F7B8 Putative uncharacterized protein n=1 Tax=Oryza s... 94 1e-18 UniRef50_B7RWZ3 'Cold-shock' DNA-binding domain protein n=1 Tax=... 94 1e-18 UniRef50_A8ILK3 Cold shock protein n=9 Tax=Proteobacteria RepID=... 93 3e-18 UniRef50_B4RGZ9 Cold-shock DNA-binding domain protein n=75 Tax=B... 93 3e-18 UniRef50_Q2S0T4 Conserved domain protein n=2 Tax=Bacteria RepID=... 93 3e-18 UniRef50_B3EP04 Cold-shock DNA-binding domain protein n=13 Tax=C... 92 4e-18 UniRef50_Q47TE2 Cold-shock DNA-binding protein family n=9 Tax=Ac... 92 4e-18 UniRef50_A8PLB9 'Cold-shock' DNA-binding domain containing prote... 92 4e-18 UniRef50_B9KKC8 Cold-shock DNA-binding protein family n=21 Tax=R... 92 5e-18 UniRef50_Q1YTJ3 Cold shock protein n=1 Tax=gamma proteobacterium... 92 5e-18 UniRef50_Q9Z3S6 Cold shock protein cspA n=72 Tax=Bacteria RepID=... 92 5e-18 UniRef50_D1AYL8 Cold-shock DNA-binding domain protein n=3 Tax=ce... 92 6e-18 UniRef50_P46449 Cold shock-like protein cspD n=53 Tax=Bacteria R... 92 6e-18 UniRef50_A3YG84 Cold-shock protein CspD n=2 Tax=Marinomonas RepI... 92 7e-18 UniRef50_B1Z823 Cold-shock DNA-binding domain protein n=34 Tax=A... 91 1e-17 UniRef50_B6QZ94 Cold-shock DNA-binding domain protein n=1 Tax=Ps... 91 1e-17 UniRef50_Q5JKD6 Cold shock domain protein 2-like protein n=1 Tax... 91 1e-17 UniRef50_Q4H2L8 Y-box protein 1/2/3 n=2 Tax=Ciona intestinalis R... 91 1e-17 UniRef50_P91306 Y-box protein 2 n=6 Tax=Caenorhabditis RepID=P91... 91 1e-17 UniRef50_Q23960 Y-box protein n=1 Tax=Dugesia japonica RepID=Q23... 91 1e-17 UniRef50_A5VRP5 Cold-shock family protein n=37 Tax=Brucellaceae ... 90 1e-17 UniRef50_A5V9E9 Cold-shock DNA-binding protein family n=2 Tax=ce... 90 2e-17 UniRef50_Q1NG42 Cold shock protein n=3 Tax=Alphaproteobacteria R... 90 2e-17 UniRef50_A3VSH0 Cold shock protein n=1 Tax=Parvularcula bermuden... 90 2e-17 UniRef50_B8KR01 'Cold-shock' DNA-binding domain protein n=1 Tax=... 90 2e-17 UniRef50_Q6ZN17 Protein lin-28 homolog B n=13 Tax=Tetrapoda RepI... 90 2e-17 UniRef50_C8WCQ1 Cold-shock DNA-binding domain protein n=18 Tax=A... 90 2e-17 UniRef50_D2QP83 Cold-shock DNA-binding domain protein n=5 Tax=Ba... 89 3e-17 UniRef50_Q9EZJ7 Cold shock-like protein CspE (Fragment) n=1 Tax=... 89 3e-17 UniRef50_Q2W0B3 Cold shock protein n=3 Tax=Magnetospirillum RepI... 89 4e-17 UniRef50_Q5YVF2 Putative cold shock protein n=1 Tax=Nocardia far... 89 4e-17 UniRef50_Q4SGH3 Chromosome undetermined SCAF14594, whole genome ... 89 5e-17 UniRef50_UPI0000589074 PREDICTED: similar to ENSANGP00000011455 ... 89 5e-17 UniRef50_B9JZ17 Cold shock protein n=106 Tax=Alphaproteobacteria... 89 5e-17 UniRef50_Q2S3Y3 'Cold-shock' DNA-binding domain, putative n=1 Ta... 89 5e-17 UniRef50_D1BKC9 Cold shock domain protein CspD n=31 Tax=Bacteria... 89 5e-17 UniRef50_A4TN10 Cold-shock DNA-binding protein family n=35 Tax=E... 89 6e-17 UniRef50_B1MZK9 Cold shock protein n=15 Tax=Bacteria RepID=B1MZK... 88 8e-17 UniRef50_P92186 Protein lin-28 n=5 Tax=Caenorhabditis RepID=LIN2... 88 9e-17 UniRef50_B6IXJ6 Cold shock-like protein CspA n=1 Tax=Rhodospiril... 87 1e-16 UniRef50_D2H5S2 Putative uncharacterized protein (Fragment) n=2 ... 87 1e-16 UniRef50_A3YF52 Cold-shock protein, DNA-binding n=2 Tax=Marinomo... 87 2e-16 UniRef50_B0T8T3 Cold-shock DNA-binding domain protein n=40 Tax=B... 87 2e-16 UniRef50_B3QHW3 Cold-shock DNA-binding domain protein n=92 Tax=A... 87 2e-16 UniRef50_A4V6J7 Y-Box factor protein (Fragment) n=1 Tax=Dugesia ... 86 3e-16 UniRef50_A0Z255 Cold shock protein, CspA family-like protein n=1... 86 4e-16 UniRef50_B4SFC0 Cold-shock DNA-binding domain protein n=1 Tax=Pe... 85 4e-16 UniRef50_Q4UBG6 Cold shock protein, putative n=2 Tax=Theileria R... 85 4e-16 UniRef50_C1E859 Cold-shock protein with RNA binding domain n=2 T... 85 5e-16 UniRef50_C8SGB1 Cold-shock DNA-binding domain protein n=4 Tax=Me... 85 6e-16 UniRef50_A0PKZ5 Cold shock-like protein B CspB n=78 Tax=Actinomy... 85 6e-16 UniRef50_B3DPK3 Cold shock protein n=7 Tax=Bifidobacterium RepID... 85 7e-16 UniRef50_A8NIV0 'Cold-shock' DNA-binding domain containing prote... 85 8e-16 UniRef50_Q803L0 Protein lin-28 homolog A n=13 Tax=Euteleostomi R... 85 8e-16 UniRef50_Q2NK56 Cold shock protein n=6 Tax=Bacteria RepID=Q2NK56... 84 1e-15 UniRef50_Q1RHK6 Cold shock-like protein cspA n=15 Tax=Rickettsia... 84 1e-15 UniRef50_B6KPP5 Glycine-rich protein 2, putative n=3 Tax=Toxopla... 84 1e-15 UniRef50_A0R441 'Cold-shock' DNA-binding domain protein n=18 Tax... 84 1e-15 UniRef50_Q1AWL7 Cold-shock DNA-binding protein family n=2 Tax=ce... 84 2e-15 UniRef50_Q016S2 Putative nucleic acid binding protein (ISS) n=1 ... 84 2e-15 UniRef50_A4FKV9 Putative DNA-binding protein n=1 Tax=Saccharopol... 84 2e-15 UniRef50_Q9H9Z2 Protein lin-28 homolog A n=33 Tax=Euteleostomi R... 84 2e-15 UniRef50_B4RAZ9 Cold-shock DNA-binding domain protein n=6 Tax=Ca... 83 3e-15 UniRef50_C0CRT9 Putative uncharacterized protein n=1 Tax=Blautia... 83 3e-15 UniRef50_Q1GT29 Cold-shock DNA-binding protein family n=1 Tax=Sp... 83 3e-15 UniRef50_C2E292 Cold-shock protein n=9 Tax=Lactobacillus RepID=C... 82 4e-15 UniRef50_B9T6D3 Cellular nucleic acid binding protein, putative ... 82 4e-15 UniRef50_Q0VN88 Cold-shock domain family protein n=2 Tax=Alcaniv... 82 4e-15 UniRef50_A7BYF1 Putative uncharacterized protein n=1 Tax=Beggiat... 82 4e-15 UniRef50_B9MXF4 Predicted protein n=2 Tax=Populus trichocarpa Re... 82 5e-15 UniRef50_D1U4V2 Cold-shock DNA-binding domain protein n=1 Tax=De... 82 6e-15 UniRef50_A0ACJ4 Putative DNA-binding protein n=2 Tax=Streptomyce... 82 7e-15 UniRef50_B2IBA0 Cold-shock DNA-binding domain protein n=2 Tax=Rh... 82 7e-15 UniRef50_C0Z2E8 AT4G38680 protein n=103 Tax=cellular organisms R... 82 8e-15 UniRef50_A9AXX4 Cold-shock DNA-binding domain protein n=1 Tax=He... 81 8e-15 UniRef50_B7RPT8 Cold shock protein n=1 Tax=Roseobacter sp. GAI10... 81 1e-14 UniRef50_C4K358 RNA chaperone, transcription antiterminator n=3 ... 81 1e-14 UniRef50_B0VIQ0 Cold-shock domain family protein n=2 Tax=Bacteri... 80 1e-14 UniRef50_B0W4X1 Putative uncharacterized protein n=1 Tax=Culex q... 80 2e-14 UniRef50_D1S746 Cold-shock DNA-binding domain protein n=1 Tax=Mi... 80 2e-14 UniRef50_C4RFH3 DNA binding protein n=1 Tax=Micromonospora sp. A... 80 3e-14 UniRef50_A1B0C7 Cold-shock DNA-binding protein family n=28 Tax=R... 80 3e-14 UniRef50_UPI0001B4CA82 DNA-binding protein n=1 Tax=Streptomyces ... 79 4e-14 UniRef50_Q1QLF4 Cold-shock DNA-binding protein family n=1 Tax=Ni... 79 4e-14 UniRef50_B9T6B7 Cold shock protein, putative n=1 Tax=Ricinus com... 79 4e-14 UniRef50_D2RAW4 Cold-shock DNA-binding domain protein n=2 Tax=Bi... 79 4e-14 UniRef50_Q2RZT3 Conserved domain protein n=2 Tax=Salinibacter ru... 79 5e-14 UniRef50_A1UT19 Cold-shock DNA-binding family protein n=1 Tax=Ba... 79 6e-14 UniRef50_Q2RNN9 Cold-shock DNA-binding protein family n=2 Tax=Rh... 79 6e-14 UniRef50_C6A7D6 Cold shock protein n=5 Tax=Bifidobacteriaceae Re... 79 6e-14 UniRef50_A0M1Q5 Cold shock-like protein n=13 Tax=Bacteria RepID=... 79 6e-14 UniRef50_Q5Z0N3 Putative cold shock protein n=2 Tax=Bacteria Rep... 79 6e-14 UniRef50_C5RAK7 Cold shock protein CspA n=1 Tax=Weissella parame... 78 7e-14 UniRef50_B0T0Q8 Cold-shock DNA-binding domain protein n=2 Tax=Ca... 78 7e-14 UniRef50_A9KN41 Cold-shock DNA-binding domain protein n=22 Tax=F... 78 8e-14 UniRef50_C9NB66 Cold-shock DNA-binding domain protein n=1 Tax=St... 78 8e-14 UniRef50_B7G5B5 Predicted protein n=1 Tax=Phaeodactylum tricornu... 77 1e-13 UniRef50_Q2RQP4 Cold-shock DNA-binding protein family n=1 Tax=Rh... 77 1e-13 UniRef50_Q607Y7 Cold-shock DNA-binding domain protein n=1 Tax=Me... 77 1e-13 UniRef50_D0LBW3 Cold-shock protein DNA-binding protein n=2 Tax=C... 77 1e-13 UniRef50_Q2RWM8 Cold-shock DNA-binding protein family n=1 Tax=Rh... 77 1e-13 UniRef50_Q042Q8 Cold-shock DNA-binding protein family n=18 Tax=L... 77 2e-13 UniRef50_A6ESQ3 Cold shock protein n=2 Tax=Bacteroidetes RepID=A... 77 2e-13 UniRef50_D2QU65 Cold-shock DNA-binding domain protein n=23 Tax=B... 77 2e-13 UniRef50_Q7NNC3 Gsr0488 protein n=1 Tax=Gloeobacter violaceus Re... 77 2e-13 UniRef50_Q28PH1 Cold-shock DNA-binding protein family n=11 Tax=R... 77 2e-13 UniRef50_Q9XTJ6 Protein Y39A1C.3, confirmed by transcript eviden... 77 2e-13 UniRef50_B9KHN5 Cold shock protein (CspA) n=10 Tax=Anaplasmatace... 77 2e-13 UniRef50_D0Z9M8 Cold shock-like protein n=3 Tax=Enterobacteriace... 76 3e-13 UniRef50_Q17JD9 Putative uncharacterized protein n=1 Tax=Aedes a... 76 3e-13 UniRef50_Q5YWN3 Putative cold shock protein n=1 Tax=Nocardia far... 76 3e-13 UniRef50_C6C161 Cold-shock DNA-binding domain protein n=1 Tax=De... 76 4e-13 UniRef50_Q0APJ7 Cold-shock DNA-binding protein family n=1 Tax=Ma... 75 5e-13 UniRef50_C6XG83 Cold shock protein n=1 Tax=Candidatus Liberibact... 75 5e-13 UniRef50_D1XSW6 Cold-shock DNA-binding domain protein n=3 Tax=St... 75 5e-13 UniRef50_A5VJ42 Cold-shock DNA-binding protein family n=10 Tax=L... 75 6e-13 UniRef50_Q013V8 Glycogen debranching enzyme (ISS) n=1 Tax=Ostreo... 75 8e-13 UniRef50_Q56922 Major cold shock protein (Fragment) n=404 Tax=Ba... 75 8e-13 UniRef50_B9K345 CspA-like protein n=3 Tax=Agrobacterium RepID=B9... 75 8e-13 UniRef50_C8WB38 Cold-shock DNA-binding domain protein n=3 Tax=Zy... 75 8e-13 UniRef50_Q475L4 Cold-shock DNA-binding protein family n=1 Tax=Ra... 75 9e-13 UniRef50_Q0RYK4 Probable cold shock protein CspA n=1 Tax=Rhodoco... 74 1e-12 UniRef50_Q6ALH9 Hypothetical cold-shock protein n=1 Tax=Desulfot... 74 2e-12 UniRef50_C6XKA2 Cold-shock DNA-binding domain protein n=1 Tax=Hi... 74 2e-12 UniRef50_D0WJT4 Cold-shock domain protein n=1 Tax=Actinomyces sp... 74 2e-12 Sequences not found previously or not previously below threshold: >UniRef50_P58726 Cold shock-like protein cspJ n=322 Tax=cellular organisms RepID=CSPJ_SALTI Length = 70 Score = 121 bits (305), Expect = 6e-27, Method: Composition-based stats. Identities = 56/70 (80%), Positives = 63/70 (90%) Query: 1 MSNKMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQR 60 M+ K+TGLVKWFN +KGFGFITP DGSKDVFVHF+AIQSNEFRTLNENQ+VEFS EQG + Sbjct: 1 MTTKITGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNEFRTLNENQEVEFSAEQGPK 60 Query: 61 GPAAANVVTL 70 GP+A NVV L Sbjct: 61 GPSAVNVVAL 70 >UniRef50_Q88P68 Cold-shock domain family protein n=52 Tax=Bacteria RepID=Q88P68_PSEPK Length = 165 Score = 117 bits (294), Expect = 1e-25, Method: Composition-based stats. Identities = 35/70 (50%), Positives = 47/70 (67%), Gaps = 1/70 (1%) Query: 1 MSNKMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQR 60 M+ + G VKWFN +KG+GFITP+ G D+FVHF AI+ N F++L E Q+V F QGQ+ Sbjct: 97 MAERQKGTVKWFNDEKGYGFITPESG-PDLFVHFRAIEGNGFKSLKEGQQVTFEAVQGQK 155 Query: 61 GPAAANVVTL 70 G A V + Sbjct: 156 GMQADKVQPV 165 >UniRef50_P0A363 Cold shock-like protein cspB n=58 Tax=Enterobacteriaceae RepID=CSPB_YEREN Length = 70 Score = 117 bits (293), Expect = 2e-25, Method: Composition-based stats. Identities = 54/70 (77%), Positives = 63/70 (90%) Query: 1 MSNKMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQR 60 MSNKMTGLVKWF+A KGFGFI+P DGSKDVFVHF+AIQ N+++TL+E Q VEFSIEQGQ+ Sbjct: 1 MSNKMTGLVKWFDAGKGFGFISPADGSKDVFVHFSAIQGNDYKTLDEGQNVEFSIEQGQK 60 Query: 61 GPAAANVVTL 70 GP+A NVV L Sbjct: 61 GPSAVNVVAL 70 >UniRef50_P36995 Cold shock-like protein cspB n=24 Tax=Bacteria RepID=CSPB_ECOLI Length = 71 Score = 115 bits (289), Expect = 4e-25, Method: Composition-based stats. Identities = 54/69 (78%), Positives = 61/69 (88%) Query: 1 MSNKMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQR 60 MSNKMTGLVKWFNADKGFGFI+P DGSKDVFVHF+AIQ++ +RTL E QKV FSIE G + Sbjct: 1 MSNKMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAK 60 Query: 61 GPAAANVVT 69 GPAAANV+ Sbjct: 61 GPAAANVII 69 >UniRef50_Q7NT55 Cold shock transcription regulator protein n=1 Tax=Chromobacterium violaceum RepID=Q7NT55_CHRVO Length = 110 Score = 115 bits (288), Expect = 5e-25, Method: Composition-based stats. Identities = 36/69 (52%), Positives = 47/69 (68%) Query: 2 SNKMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRG 61 + TG VKWFN KGFGFITPD+G DVF HF+ I + FR+L ENQ+V F I +G +G Sbjct: 42 NKMATGTVKWFNDSKGFGFITPDEGGDDVFAHFSQINAKGFRSLAENQRVSFDIVEGPKG 101 Query: 62 PAAANVVTL 70 A+N+ + Sbjct: 102 KQASNIQPI 110 >UniRef50_P0A974 Cold shock-like protein cspE n=233 Tax=Gammaproteobacteria RepID=CSPE_ECO57 Length = 69 Score = 115 bits (288), Expect = 6e-25, Method: Composition-based stats. Identities = 46/68 (67%), Positives = 56/68 (82%) Query: 3 NKMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGP 62 +K+ G VKWFN KGFGFITP+DGSKDVFVHF+AIQ+N F+TL E Q+VEF I G +GP Sbjct: 2 SKIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGP 61 Query: 63 AAANVVTL 70 +AANV+ L Sbjct: 62 SAANVIAL 69 >UniRef50_A3BPB0 Putative uncharacterized protein n=4 Tax=Oryza sativa RepID=A3BPB0_ORYSJ Length = 238 Score = 114 bits (287), Expect = 8e-25, Method: Composition-based stats. Identities = 35/69 (50%), Positives = 49/69 (71%), Gaps = 1/69 (1%) Query: 2 SNKMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRG 61 S ++ G VKWF+A KGFGFITPDDG +D+FVH ++++S+ +R+LN+ VEFS+ G G Sbjct: 3 SERVKGTVKWFDATKGFGFITPDDGGEDLFVHQSSLKSDGYRSLNDGDVVEFSVGSGNDG 62 Query: 62 P-AAANVVT 69 A NV Sbjct: 63 RTKAVNVTA 71 >UniRef50_Q4KEW6 Cold shock protein capa n=14 Tax=Bacteria RepID=Q4KEW6_PSEF5 Length = 91 Score = 114 bits (287), Expect = 8e-25, Method: Composition-based stats. Identities = 40/69 (57%), Positives = 49/69 (71%) Query: 1 MSNKMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQR 60 MSN+ TG VKWFN +KGFGFITP G D+FVHF AI+S+ F++L E Q V F E+GQ+ Sbjct: 22 MSNRQTGTVKWFNDEKGFGFITPQGGGDDLFVHFKAIESDGFKSLKEGQTVSFVAEKGQK 81 Query: 61 GPAAANVVT 69 G AA V Sbjct: 82 GMQAAQVRP 90 >UniRef50_C9Y043 Cold shock-like protein cspD n=3 Tax=Enterobacteriaceae RepID=C9Y043_CROTZ Length = 99 Score = 112 bits (281), Expect = 3e-24, Method: Composition-based stats. Identities = 32/70 (45%), Positives = 44/70 (62%) Query: 1 MSNKMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQR 60 + TG VKWFN KGFGFI P+ G +D+F H++ IQ + +RTL Q V F + QG + Sbjct: 21 CRSMETGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQVVRFDVHQGPK 80 Query: 61 GPAAANVVTL 70 G A+ +V L Sbjct: 81 GNHASVIVPL 90 >UniRef50_B3PL56 Cold-shock protein CspD n=34 Tax=Bacteria RepID=B3PL56_CELJU Length = 125 Score = 112 bits (281), Expect = 4e-24, Method: Composition-based stats. Identities = 30/64 (46%), Positives = 43/64 (67%) Query: 6 TGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPAAA 65 TG VKWFN KG+GFI D+G +D+F H++AI + ++TL Q+V F I +G +G A Sbjct: 44 TGTVKWFNNAKGYGFILADEGGEDLFAHYSAISMDGYKTLKAGQQVSFEITRGDKGLHAI 103 Query: 66 NVVT 69 N+V Sbjct: 104 NIVA 107 >UniRef50_B5Y9M2 Conserved domain protein n=20 Tax=Bacteria RepID=B5Y9M2_COPPD Length = 89 Score = 112 bits (280), Expect = 5e-24, Method: Composition-based stats. Identities = 39/68 (57%), Positives = 49/68 (72%) Query: 2 SNKMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRG 61 + TG VKWF+A KG+GFIT DDG DVFVHF+AI+ N F++L++ KVEF I G +G Sbjct: 21 TKMYTGTVKWFDAKKGYGFITRDDGEGDVFVHFSAIEGNGFKSLDQGDKVEFEIVNGPKG 80 Query: 62 PAAANVVT 69 P AA VV Sbjct: 81 PQAAKVVK 88 >UniRef50_Q08VT0 Conserved domain protein n=3 Tax=Bacteria RepID=Q08VT0_STIAU Length = 100 Score = 111 bits (279), Expect = 6e-24, Method: Composition-based stats. Identities = 38/67 (56%), Positives = 44/67 (65%) Query: 3 NKMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGP 62 N TG VKWFN KGFGFIT D G +DVF H TAI + FRTL E QKV+F + +G +G Sbjct: 33 NMATGTVKWFNDAKGFGFITQDGGGEDVFCHHTAINMDGFRTLQEGQKVQFDVARGPKGL 92 Query: 63 AAANVVT 69 A NV Sbjct: 93 QAQNVRA 99 >UniRef50_D1IX09 Whole genome shotgun sequence of line PN40024, scaffold_38.assembly12x (Fragment) n=1 Tax=Vitis vinifera RepID=D1IX09_VITVI Length = 236 Score = 111 bits (278), Expect = 9e-24, Method: Composition-based stats. Identities = 35/67 (52%), Positives = 46/67 (68%), Gaps = 1/67 (1%) Query: 3 NKMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGP 62 +++TG VKWFN KGFGFITPDDG D+FVH ++I+S FR+L E + VEF +E G Sbjct: 2 SRVTGTVKWFNDQKGFGFITPDDGGDDLFVHQSSIRSEGFRSLGEGEAVEFVVESSDDGR 61 Query: 63 -AAANVV 68 A +V Sbjct: 62 TKAVDVT 68 >UniRef50_O30875 Major cold shock protein n=98 Tax=cellular organisms RepID=CSPA_MICLC Length = 67 Score = 110 bits (277), Expect = 1e-23, Method: Composition-based stats. Identities = 39/64 (60%), Positives = 47/64 (73%) Query: 7 GLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPAAAN 66 G VKWFNA+KG+GFI P+D S DVFVHF+AIQ N F+ L EN +VEF + G +G AAN Sbjct: 4 GTVKWFNAEKGYGFIAPEDNSADVFVHFSAIQGNGFKELQENDRVEFETQDGPKGLQAAN 63 Query: 67 VVTL 70 V L Sbjct: 64 VTKL 67 >UniRef50_Q0JY13 Cold shock protein, DNA-binding n=2 Tax=Burkholderiaceae RepID=Q0JY13_RALEH Length = 98 Score = 110 bits (276), Expect = 1e-23, Method: Composition-based stats. Identities = 34/65 (52%), Positives = 48/65 (73%) Query: 6 TGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPAAA 65 TG+VKWFN KGFGFI PD G D+F HF+ I+++ F++L ENQ+V+F ++ G +G AA Sbjct: 20 TGIVKWFNDAKGFGFIKPDAGGDDLFAHFSEIRADGFKSLQENQRVQFEVKNGPKGLQAA 79 Query: 66 NVVTL 70 N+ L Sbjct: 80 NITPL 84 >UniRef50_A9IR63 Cold shock-like protein n=13 Tax=cellular organisms RepID=A9IR63_BORPD Length = 68 Score = 110 bits (275), Expect = 2e-23, Method: Composition-based stats. Identities = 37/64 (57%), Positives = 51/64 (79%) Query: 6 TGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPAAA 65 TG+VKWFNA+KG+GFITPDDGSKD+F H++ I S +++L ENQ+V F + QG +GP+A Sbjct: 3 TGIVKWFNAEKGYGFITPDDGSKDLFAHYSEISSEGYKSLQENQRVTFEVGQGPKGPSAK 62 Query: 66 NVVT 69 N+ Sbjct: 63 NIKV 66 >UniRef50_P0A9Y8 Cold shock-like protein cspC n=125 Tax=Enterobacteriaceae RepID=CSPC_ECO57 Length = 69 Score = 110 bits (275), Expect = 2e-23, Method: Composition-based stats. Identities = 46/67 (68%), Positives = 52/67 (77%) Query: 4 KMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPA 63 K+ G VKWFN KGFGFITP DGSKDVFVHF+AIQ N F+TL E Q VEF I+ GQ+GPA Sbjct: 3 KIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPA 62 Query: 64 AANVVTL 70 A NV + Sbjct: 63 AVNVTAI 69 >UniRef50_A4VNB0 Cold-shock DNA-binding protein n=75 Tax=Bacteria RepID=A4VNB0_PSEU5 Length = 243 Score = 108 bits (271), Expect = 5e-23, Method: Composition-based stats. Identities = 34/69 (49%), Positives = 43/69 (62%), Gaps = 1/69 (1%) Query: 2 SNKMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRG 61 + + G VKWFN KGFGFI+ D G DVFVHF AI+ R L E Q+VEF+I +G Sbjct: 172 AGREAGTVKWFNTSKGFGFISRDSG-DDVFVHFRAIRGEGHRILVEGQRVEFTIMMRDKG 230 Query: 62 PAAANVVTL 70 A +VV + Sbjct: 231 LQAEDVVPV 239 >UniRef50_A4G7K9 Cold shock protein CspD n=3 Tax=Bacteria RepID=A4G7K9_HERAR Length = 67 Score = 108 bits (271), Expect = 5e-23, Method: Composition-based stats. Identities = 36/62 (58%), Positives = 44/62 (70%) Query: 6 TGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPAAA 65 TG VKWFN KGFGFITPD G +D+F HF+AI F+TL E QKV F + QG +G A+ Sbjct: 3 TGTVKWFNDSKGFGFITPDSGGEDLFAHFSAITMEGFKTLKEGQKVSFEVTQGPKGKQAS 62 Query: 66 NV 67 N+ Sbjct: 63 NI 64 >UniRef50_A1JMC2 Cold shock-like protein cspD (Cold shock-like protein) n=19 Tax=Bacteria RepID=A1JMC2_YERE8 Length = 85 Score = 108 bits (270), Expect = 8e-23, Method: Composition-based stats. Identities = 32/65 (49%), Positives = 43/65 (66%) Query: 6 TGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPAAA 65 TG VKWFN KGFGFI P+ G +D+F H++ IQ + +RTL Q V F + QG +G A+ Sbjct: 3 TGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQMVNFDVHQGPKGNHAS 62 Query: 66 NVVTL 70 +V L Sbjct: 63 LIVPL 67 >UniRef50_A2SIM9 Cold-shock DNA-binding protein family n=16 Tax=Proteobacteria RepID=A2SIM9_METPP Length = 89 Score = 107 bits (267), Expect = 1e-22, Method: Composition-based stats. Identities = 32/66 (48%), Positives = 42/66 (63%) Query: 5 MTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPAA 64 + G VKWFN KGFGFI P+ G +DVF HF+AI + FRTL + +V F + G +G A Sbjct: 2 VNGTVKWFNDAKGFGFIEPEGGGEDVFAHFSAILMDGFRTLKQGARVSFELVDGPKGKLA 61 Query: 65 ANVVTL 70 N+ L Sbjct: 62 QNIAPL 67 >UniRef50_C4WXL4 ACYPI009849 protein n=3 Tax=cellular organisms RepID=C4WXL4_ACYPI Length = 250 Score = 106 bits (266), Expect = 2e-22, Method: Composition-based stats. Identities = 33/63 (52%), Positives = 43/63 (68%) Query: 6 TGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPAAA 65 G+ KWFN+ KGFGF+TPDDG KDVFVH I+ + FR+L EN+ VEF+ + +G A Sbjct: 72 QGICKWFNSKKGFGFVTPDDGGKDVFVHQRVIKKDGFRSLRENEHVEFTCHESDKGLEAT 131 Query: 66 NVV 68 V Sbjct: 132 LVT 134 >UniRef50_C7Q9X4 Cold-shock DNA-binding domain protein n=31 Tax=Bacteria RepID=C7Q9X4_CATAD Length = 68 Score = 106 bits (266), Expect = 2e-22, Method: Composition-based stats. Identities = 35/63 (55%), Positives = 44/63 (69%) Query: 7 GLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPAAAN 66 G VKWFNA+KGFGFI D G DVF HF+ I ++ +R L E Q+V F + QGQ+GP A N Sbjct: 4 GTVKWFNAEKGFGFIEQDGGGADVFAHFSNIAADGYRELQEGQRVSFEVTQGQKGPQAVN 63 Query: 67 VVT 69 +V Sbjct: 64 IVP 66 >UniRef50_A4VMZ2 Cold shock protein CspA n=2 Tax=Gammaproteobacteria RepID=A4VMZ2_PSEU5 Length = 136 Score = 106 bits (265), Expect = 2e-22, Method: Composition-based stats. Identities = 35/70 (50%), Positives = 46/70 (65%), Gaps = 1/70 (1%) Query: 1 MSNKMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQR 60 M+ + TG VKWFN KG+GFI DVFVH+ AI+ + R+L E Q+VEFS+ QGQ+ Sbjct: 68 MAERETGTVKWFNDAKGYGFIQR-GNGADVFVHYRAIRGDGHRSLAEGQQVEFSVIQGQK 126 Query: 61 GPAAANVVTL 70 G A +V L Sbjct: 127 GLQAEDVAGL 136 >UniRef50_P62171 Cold shock-like protein cspC n=85 Tax=Bacteria RepID=CSPC_BACCR Length = 65 Score = 106 bits (265), Expect = 2e-22, Method: Composition-based stats. Identities = 42/66 (63%), Positives = 50/66 (75%), Gaps = 1/66 (1%) Query: 5 MTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPAA 64 M G VKWFNA+KGFGFI +DG DVFVHF+AIQ + +++L E Q+VEF I G RGP A Sbjct: 1 MQGRVKWFNAEKGFGFIEREDG-DDVFVHFSAIQQDGYKSLEEGQQVEFDIVDGARGPQA 59 Query: 65 ANVVTL 70 ANVV L Sbjct: 60 ANVVKL 65 >UniRef50_Q1DBV4 Cold-shock protein CspA n=10 Tax=cellular organisms RepID=Q1DBV4_MYXXD Length = 68 Score = 106 bits (265), Expect = 3e-22, Method: Composition-based stats. Identities = 39/65 (60%), Positives = 44/65 (67%) Query: 6 TGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPAAA 65 TG VKWFN KGFGFI DDG DVF H TAIQ++ FRTL E QKVEF +G +G A Sbjct: 3 TGTVKWFNDAKGFGFIAQDDGGADVFCHHTAIQTDGFRTLAEGQKVEFETRKGPKGLQAE 62 Query: 66 NVVTL 70 NV + Sbjct: 63 NVRVV 67 >UniRef50_A5BWB0 Putative uncharacterized protein n=1 Tax=Vitis vinifera RepID=A5BWB0_VITVI Length = 189 Score = 106 bits (265), Expect = 3e-22, Method: Composition-based stats. Identities = 36/70 (51%), Positives = 50/70 (71%), Gaps = 1/70 (1%) Query: 2 SNKMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRG 61 S + TG VKWF+ KGFGFI PDDG +D+FVH T+I+S+ FRTL+E + VEF+++ G+ G Sbjct: 4 SKRSTGTVKWFSGQKGFGFIAPDDGGEDLFVHQTSIRSDGFRTLSEGETVEFAVDHGEDG 63 Query: 62 P-AAANVVTL 70 A V + Sbjct: 64 RTKAVEVTAV 73 >UniRef50_A4VLV8 Cold-shock protein CspD n=5 Tax=Gammaproteobacteria RepID=A4VLV8_PSEU5 Length = 93 Score = 105 bits (264), Expect = 4e-22, Method: Composition-based stats. Identities = 30/68 (44%), Positives = 44/68 (64%) Query: 2 SNKMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRG 61 ++ ++G VKWFN KG+GFI D G +D+F H++AIQ +RTL Q V F+I QG +G Sbjct: 5 NSMLSGKVKWFNNAKGYGFIVADGGDEDLFAHYSAIQMEGYRTLKAGQAVMFNILQGPKG 64 Query: 62 PAAANVVT 69 A ++ Sbjct: 65 LHATDIRP 72 >UniRef50_Q03A67 Cold-shock DNA-binding protein family n=16 Tax=Firmicutes RepID=Q03A67_LACC3 Length = 66 Score = 104 bits (261), Expect = 8e-22, Method: Composition-based stats. Identities = 38/62 (61%), Positives = 46/62 (74%), Gaps = 1/62 (1%) Query: 6 TGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPAAA 65 G VKWFNA+KG+GFIT +DGS DVFVHF+AIQ + ++TL E Q V F +E RGP A Sbjct: 3 HGTVKWFNAEKGYGFITREDGS-DVFVHFSAIQGDGYKTLEEGQAVTFEVEDSDRGPQAV 61 Query: 66 NV 67 NV Sbjct: 62 NV 63 >UniRef50_B7C7U1 Putative uncharacterized protein n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7C7U1_9FIRM Length = 90 Score = 104 bits (261), Expect = 9e-22, Method: Composition-based stats. Identities = 35/65 (53%), Positives = 46/65 (70%), Gaps = 1/65 (1%) Query: 6 TGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPAAA 65 TG VKWFNA+KG+GFIT +DG KDVFVH+++I S F+TL E Q V + + + RG A Sbjct: 23 TGKVKWFNAEKGYGFITSEDG-KDVFVHYSSINSEGFKTLEEGQTVTYDVVESDRGQQAN 81 Query: 66 NVVTL 70 NV + Sbjct: 82 NVTVV 86 >UniRef50_Q2LY24 Cold shock protein n=11 Tax=Bacteria RepID=Q2LY24_SYNAS Length = 132 Score = 103 bits (259), Expect = 1e-21, Method: Composition-based stats. Identities = 35/64 (54%), Positives = 45/64 (70%), Gaps = 1/64 (1%) Query: 7 GLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPAAAN 66 G VKWFNA KGFGFI D+G+ DVFVHF+AI+ ++ L E +V F + +G +GPAA N Sbjct: 70 GTVKWFNASKGFGFIAQDNGN-DVFVHFSAIKMEGYKALEEGARVRFDVVKGNKGPAADN 128 Query: 67 VVTL 70 V L Sbjct: 129 VELL 132 >UniRef50_C4Z3Q0 Cold shock protein (Beta-ribbon, CspA family) n=10 Tax=Bacteria RepID=C4Z3Q0_EUBE2 Length = 84 Score = 103 bits (259), Expect = 1e-21, Method: Composition-based stats. Identities = 32/67 (47%), Positives = 45/67 (67%), Gaps = 1/67 (1%) Query: 4 KMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPA 63 +M G VKWFN KG+GFI+ D+ KDVFVH++ + F++L E +VEF + +G +GP Sbjct: 19 EMKGTVKWFNNQKGYGFIS-DESGKDVFVHYSGLNMEGFKSLEEGAQVEFDVTEGAKGPQ 77 Query: 64 AANVVTL 70 A NV L Sbjct: 78 ATNVTKL 84 >UniRef50_B4S1R6 Stress response protein CspD n=5 Tax=cellular organisms RepID=B4S1R6_ALTMD Length = 72 Score = 103 bits (259), Expect = 1e-21, Method: Composition-based stats. Identities = 30/61 (49%), Positives = 42/61 (68%) Query: 7 GLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPAAAN 66 G VKWFN KGFGFI P+DG +D+F H++ IQ +R+L Q+V F ++QG +G A N Sbjct: 4 GKVKWFNNAKGFGFIVPEDGGEDIFAHYSTIQMEGYRSLKAGQEVTFEVQQGPKGLHAEN 63 Query: 67 V 67 + Sbjct: 64 I 64 >UniRef50_UPI000194E5B1 PREDICTED: Rous sarcoma virus transcription enhancer factor II n=1 Tax=Taeniopygia guttata RepID=UPI000194E5B1 Length = 420 Score = 103 bits (258), Expect = 2e-21, Method: Composition-based stats. Identities = 31/70 (44%), Positives = 44/70 (62%), Gaps = 4/70 (5%) Query: 3 NKMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNE----FRTLNENQKVEFSIEQG 58 K+ G VKWFN G+GFI +D +DVFVH TAI+ N R++ + + VEF + +G Sbjct: 209 TKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDVVEG 268 Query: 59 QRGPAAANVV 68 ++G AANV Sbjct: 269 EKGAEAANVT 278 >UniRef50_Q90650 Rous sarcoma virus transcription enhancer factor II n=2 Tax=Tetrapoda RepID=Q90650_CHICK Length = 298 Score = 103 bits (258), Expect = 2e-21, Method: Composition-based stats. Identities = 31/72 (43%), Positives = 46/72 (63%), Gaps = 4/72 (5%) Query: 1 MSNKMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFR----TLNENQKVEFSIE 56 ++ K+ G VKWFN G+GFI +D +DVFVH TAI+ N R ++ + + VEF + Sbjct: 84 LATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLASVGDGETVEFDVV 143 Query: 57 QGQRGPAAANVV 68 +G++G AANV Sbjct: 144 EGEKGAEAANVT 155 >UniRef50_A3Y9L0 Cold-shock DNA-binding domain protein n=2 Tax=Marinomonas RepID=A3Y9L0_9GAMM Length = 97 Score = 103 bits (258), Expect = 2e-21, Method: Composition-based stats. Identities = 37/66 (56%), Positives = 45/66 (68%), Gaps = 1/66 (1%) Query: 5 MTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPAA 64 ++G+VKWFN +KGFGFI + G DVFVHF AI RTL E QKV F + QGQ+GP A Sbjct: 33 VSGIVKWFNDEKGFGFIERE-GGPDVFVHFRAINGTGRRTLQEGQKVTFEVTQGQKGPQA 91 Query: 65 ANVVTL 70 NV + Sbjct: 92 ENVSIV 97 >UniRef50_Q2LQ45 Cold shock protein n=49 Tax=Bacteria RepID=Q2LQ45_SYNAS Length = 90 Score = 103 bits (257), Expect = 2e-21, Method: Composition-based stats. Identities = 38/64 (59%), Positives = 48/64 (75%), Gaps = 1/64 (1%) Query: 7 GLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPAAAN 66 G VKWFN KGFGFI D+G DVFVH++AIQS+ F+TL E Q+V F ++ GQ+GPAA N Sbjct: 28 GKVKWFNEQKGFGFIEKDEGG-DVFVHYSAIQSSGFKTLYEGQRVSFEVQTGQKGPAAVN 86 Query: 67 VVTL 70 V + Sbjct: 87 VKPI 90 >UniRef50_A8QHS7 'Cold-shock' DNA-binding domain containing protein n=4 Tax=cellular organisms RepID=A8QHS7_BRUMA Length = 290 Score = 103 bits (257), Expect = 2e-21, Method: Composition-based stats. Identities = 32/72 (44%), Positives = 44/72 (61%), Gaps = 4/72 (5%) Query: 1 MSNKMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNE----FRTLNENQKVEFSIE 56 ++ + G VKWFN G+GFI D D+FVH TA+ N R+L + +KVEF + Sbjct: 54 VARHIQGTVKWFNVKNGYGFINRADTGDDIFVHQTAVTKNNPNKYLRSLGDGEKVEFDVV 113 Query: 57 QGQRGPAAANVV 68 +GQ+GP AANV Sbjct: 114 EGQKGPEAANVT 125 >UniRef50_Q3AFQ5 Cold shock protein CspC n=14 Tax=Bacteria RepID=Q3AFQ5_CARHZ Length = 65 Score = 103 bits (257), Expect = 2e-21, Method: Composition-based stats. Identities = 40/66 (60%), Positives = 50/66 (75%), Gaps = 1/66 (1%) Query: 5 MTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPAA 64 M G VKWF+ KG+GFI +DG DVFVHF+AI+ N F+TL E Q+VEF+I +G RGP A Sbjct: 1 MQGKVKWFDPAKGYGFIEREDGG-DVFVHFSAIKGNGFKTLEEGQRVEFNIVEGTRGPQA 59 Query: 65 ANVVTL 70 A+VV L Sbjct: 60 ADVVKL 65 >UniRef50_P71478 Cold shock protein 1 n=20 Tax=Firmicutes RepID=CSP1_LACPL Length = 66 Score = 102 bits (256), Expect = 3e-21, Method: Composition-based stats. Identities = 42/63 (66%), Positives = 49/63 (77%), Gaps = 1/63 (1%) Query: 7 GLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPAAAN 66 G VKWFNADKG+GFIT +DG+ DVFVHF+AIQ++ F+TL E QKV F E RGP AAN Sbjct: 4 GTVKWFNADKGYGFITGEDGN-DVFVHFSAIQTDGFKTLEEGQKVTFDEESSDRGPQAAN 62 Query: 67 VVT 69 VV Sbjct: 63 VVP 65 >UniRef50_Q5HPE0 Cold shock protein cspA n=113 Tax=Bacteria RepID=CSPA_STAEQ Length = 66 Score = 102 bits (256), Expect = 3e-21, Method: Composition-based stats. Identities = 38/65 (58%), Positives = 46/65 (70%), Gaps = 1/65 (1%) Query: 6 TGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPAAA 65 G VKWFNA+KGFGFI + G DVFVHF+AI +++L E Q VEF + +G RGP AA Sbjct: 3 QGTVKWFNAEKGFGFIEVE-GENDVFVHFSAINQEGYKSLEEGQSVEFEVVEGDRGPQAA 61 Query: 66 NVVTL 70 NVV L Sbjct: 62 NVVKL 66 >UniRef50_P16989 DNA-binding protein A n=144 Tax=cellular organisms RepID=DBPA_HUMAN Length = 372 Score = 102 bits (256), Expect = 3e-21, Method: Composition-based stats. Identities = 31/72 (43%), Positives = 46/72 (63%), Gaps = 4/72 (5%) Query: 1 MSNKMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNE----FRTLNENQKVEFSIE 56 ++ K+ G VKWFN G+GFI +D +DVFVH TAI+ N R++ + + VEF + Sbjct: 87 LATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDVV 146 Query: 57 QGQRGPAAANVV 68 +G++G AANV Sbjct: 147 EGEKGAEAANVT 158 >UniRef50_B3RZU4 Putative uncharacterized protein n=1 Tax=Trichoplax adhaerens RepID=B3RZU4_TRIAD Length = 279 Score = 102 bits (255), Expect = 3e-21, Method: Composition-based stats. Identities = 34/72 (47%), Positives = 48/72 (66%), Gaps = 4/72 (5%) Query: 1 MSNKMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNE----FRTLNENQKVEFSIE 56 ++NK++G VKWFN +G+GFI DD +DVFVH TAIQ+N R++ + + VEF + Sbjct: 25 VANKVSGKVKWFNVKRGYGFIHRDDTGEDVFVHQTAIQANNPKKYLRSVGDEEVVEFDVL 84 Query: 57 QGQRGPAAANVV 68 G +G AANV Sbjct: 85 SGPKGLEAANVT 96 >UniRef50_A3XD40 Cold shock family protein n=5 Tax=Rhodobacteraceae RepID=A3XD40_9RHOB Length = 120 Score = 102 bits (255), Expect = 4e-21, Method: Composition-based stats. Identities = 36/69 (52%), Positives = 46/69 (66%) Query: 2 SNKMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRG 61 + TG VKWFN+ KGFGFI PD G+KDVFVH +A++ + L +NQKV F IE G+ G Sbjct: 51 TEMATGTVKWFNSTKGFGFIAPDGGTKDVFVHISAVERSGLTGLADNQKVTFDIEPGRDG 110 Query: 62 PAAANVVTL 70 AA + L Sbjct: 111 REAAVNLAL 119 >UniRef50_B7PM92 PIN domain-containing RNA-binding protein, putative n=2 Tax=Ixodes scapularis RepID=B7PM92_IXOSC Length = 315 Score = 102 bits (255), Expect = 4e-21, Method: Composition-based stats. Identities = 30/72 (41%), Positives = 44/72 (61%), Gaps = 4/72 (5%) Query: 1 MSNKMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNE----FRTLNENQKVEFSIE 56 ++ ++ G VKWFN G+GFI +D +D+FVH TAI N R++ E + VEF + Sbjct: 13 LAERVLGTVKWFNVKNGYGFINRNDTREDIFVHQTAITRNNPQKIMRSVGEGETVEFDVV 72 Query: 57 QGQRGPAAANVV 68 G++G AANV Sbjct: 73 VGEKGREAANVT 84 >UniRef50_C9KNJ1 Conserved domain protein n=1 Tax=Mitsuokella multacida DSM 20544 RepID=C9KNJ1_9FIRM Length = 66 Score = 102 bits (254), Expect = 4e-21, Method: Composition-based stats. Identities = 39/65 (60%), Positives = 47/65 (72%), Gaps = 1/65 (1%) Query: 5 MTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPAA 64 M G VKWF+ +KG+GFI + G DVFVHF+AIQ F+TLNE Q VEF I +G RGP A Sbjct: 1 MVGKVKWFSPEKGYGFIARE-GGDDVFVHFSAIQDEGFKTLNEGQDVEFEIVEGARGPQA 59 Query: 65 ANVVT 69 ANV+ Sbjct: 60 ANVIK 64 >UniRef50_P0A970 Cold shock-like protein cspD n=101 Tax=Gammaproteobacteria RepID=CSPD_ECO57 Length = 74 Score = 102 bits (254), Expect = 5e-21, Method: Composition-based stats. Identities = 30/65 (46%), Positives = 43/65 (66%) Query: 6 TGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPAAA 65 G VKWFN KGFGFI P+ G +D+F H++ IQ + +RTL Q V+F + QG +G A+ Sbjct: 3 KGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNHAS 62 Query: 66 NVVTL 70 +V + Sbjct: 63 VIVPV 67 >UniRef50_A1S709 Cold-shock DNA-binding protein family n=6 Tax=cellular organisms RepID=A1S709_SHEAM Length = 70 Score = 102 bits (254), Expect = 5e-21, Method: Composition-based stats. Identities = 38/65 (58%), Positives = 47/65 (72%), Gaps = 1/65 (1%) Query: 6 TGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPAAA 65 TG VKWFN +KGFGF++ D+ S DVFVH+ AI + RTL E QKV FS+ +GQ+G AA Sbjct: 7 TGTVKWFNDEKGFGFLSRDNDS-DVFVHYRAINTQGRRTLKEGQKVSFSLVEGQKGLLAA 65 Query: 66 NVVTL 70 NV L Sbjct: 66 NVTPL 70 >UniRef50_Q81DK5 Cold shock-like protein cspE n=713 Tax=Bacteria RepID=CSPE_BACCR Length = 67 Score = 102 bits (254), Expect = 5e-21, Method: Composition-based stats. Identities = 39/66 (59%), Positives = 51/66 (77%), Gaps = 1/66 (1%) Query: 5 MTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPAA 64 +TG VKWFN++KGFGFI DG+ DVFVHF+AI + F++L+E Q+V F +E+G RGP A Sbjct: 3 LTGKVKWFNSEKGFGFIEVADGN-DVFVHFSAITGDGFKSLDEGQEVSFEVEEGNRGPQA 61 Query: 65 ANVVTL 70 NVV L Sbjct: 62 KNVVKL 67 >UniRef50_Q1LCU6 Cold-shock DNA-binding protein family n=7 Tax=Proteobacteria RepID=Q1LCU6_RALME Length = 126 Score = 102 bits (254), Expect = 6e-21, Method: Composition-based stats. Identities = 35/65 (53%), Positives = 44/65 (67%) Query: 6 TGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPAAA 65 TG VKWFN KGFGFITPD G D+F HF+ +Q N F++L E QKV + GQ+GPAA Sbjct: 62 TGTVKWFNDSKGFGFITPDAGGDDLFAHFSEVQGNGFKSLQEGQKVRYVAGVGQKGPAAT 121 Query: 66 NVVTL 70 + + Sbjct: 122 KIEPI 126 >UniRef50_P54584 Cold shock protein n=9 Tax=Bacteria RepID=CSP_ARTGO Length = 67 Score = 102 bits (254), Expect = 6e-21, Method: Composition-based stats. Identities = 38/65 (58%), Positives = 48/65 (73%) Query: 6 TGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPAAA 65 G VKWFNA+KGFGFITPDD DVFVH++ IQ+ F+TL+EN +V+F I QG +GP A Sbjct: 3 QGTVKWFNAEKGFGFITPDDSDGDVFVHYSEIQTGGFKTLDENARVQFEIGQGAKGPQAT 62 Query: 66 NVVTL 70 V + Sbjct: 63 GVTLV 67 >UniRef50_B5HGK4 Cold shock protein n=10 Tax=Streptomyces RepID=B5HGK4_STRPR Length = 67 Score = 101 bits (253), Expect = 7e-21, Method: Composition-based stats. Identities = 37/64 (57%), Positives = 45/64 (70%) Query: 6 TGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPAAA 65 +G+VKWFNA+KGFGFI D G DVF H++ I + FR L E QKV F I QGQ+GP A Sbjct: 3 SGVVKWFNAEKGFGFIEQDGGGPDVFAHYSNIAAQGFRELLEGQKVNFDIAQGQKGPTAE 62 Query: 66 NVVT 69 N+V Sbjct: 63 NIVP 66 >UniRef50_P0A356 Cold shock-like protein cspLA n=163 Tax=root RepID=CSPA_LISIN Length = 66 Score = 101 bits (253), Expect = 7e-21, Method: Composition-based stats. Identities = 39/62 (62%), Positives = 49/62 (79%), Gaps = 1/62 (1%) Query: 6 TGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPAAA 65 G VKWFNA+KGFGFI ++G DVFVHF+AIQ + F++L+E Q V F +E+GQRGP AA Sbjct: 3 QGTVKWFNAEKGFGFIERENG-DDVFVHFSAIQGDGFKSLDEGQAVTFDVEEGQRGPQAA 61 Query: 66 NV 67 NV Sbjct: 62 NV 63 >UniRef50_C6VN45 Cold shock protein CspC n=8 Tax=Firmicutes RepID=C6VN45_LACPJ Length = 66 Score = 101 bits (252), Expect = 8e-21, Method: Composition-based stats. Identities = 39/64 (60%), Positives = 48/64 (75%), Gaps = 1/64 (1%) Query: 6 TGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPAAA 65 G VKWFNADKGFGFIT ++GS DVFVHF+AIQ + F++L+E Q V F +E+ RGP A Sbjct: 3 HGTVKWFNADKGFGFITRENGS-DVFVHFSAIQEDGFKSLDEGQAVNFDVEESDRGPQAV 61 Query: 66 NVVT 69 NV Sbjct: 62 NVTK 65 >UniRef50_B0KQL2 Cold-shock DNA-binding domain protein n=2 Tax=Gammaproteobacteria RepID=B0KQL2_PSEPG Length = 70 Score = 101 bits (252), Expect = 8e-21, Method: Composition-based stats. Identities = 36/70 (51%), Positives = 47/70 (67%), Gaps = 1/70 (1%) Query: 1 MSNKMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQR 60 M+ + G VKWFN +KG+GFITP+ G D+FVHF AI+ N F++L E QKV F QGQ+ Sbjct: 1 MAERQNGTVKWFNDEKGYGFITPESG-ADLFVHFRAIEGNGFKSLKEGQKVTFVAVQGQK 59 Query: 61 GPAAANVVTL 70 G A V + Sbjct: 60 GLQADQVQVV 69 >UniRef50_Q9VRN5 Protein lin-28 homolog n=1 Tax=Drosophila melanogaster RepID=LIN28_DROME Length = 195 Score = 101 bits (252), Expect = 8e-21, Method: Composition-based stats. Identities = 30/61 (49%), Positives = 42/61 (68%) Query: 7 GLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPAAAN 66 G KWFN KG+GF+TP+DG ++VFVH + IQ + FR+L E ++VEF ++ RG A Sbjct: 41 GKCKWFNVAKGWGFLTPNDGGQEVFVHQSVIQMSGFRSLGEQEEVEFECQRTSRGLEATR 100 Query: 67 V 67 V Sbjct: 101 V 101 >UniRef50_Q816H3 Cold shock-like protein cspD n=370 Tax=Bacteria RepID=CSPD_BACCR Length = 66 Score = 101 bits (252), Expect = 8e-21, Method: Composition-based stats. Identities = 39/64 (60%), Positives = 47/64 (73%), Gaps = 1/64 (1%) Query: 6 TGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPAAA 65 TG VKWFN++KGFGFI + G DVFVHF+AIQ + F+TL E Q+V F I +G RGP AA Sbjct: 3 TGKVKWFNSEKGFGFIEVE-GGDDVFVHFSAIQGDGFKTLEEGQEVSFEIVEGNRGPQAA 61 Query: 66 NVVT 69 NV Sbjct: 62 NVTK 65 >UniRef50_P41824 Y-box factor homolog n=1 Tax=Aplysia californica RepID=YBOXH_APLCA Length = 253 Score = 101 bits (252), Expect = 9e-21, Method: Composition-based stats. Identities = 32/72 (44%), Positives = 48/72 (66%), Gaps = 4/72 (5%) Query: 1 MSNKMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNE----FRTLNENQKVEFSIE 56 ++++++G VKWFN G+GFI DD +DVFVH TAI N R++ + +KVEF + Sbjct: 29 IASQVSGTVKWFNVKSGYGFINRDDTKEDVFVHQTAIVKNNPRKYLRSVGDGEKVEFDVV 88 Query: 57 QGQRGPAAANVV 68 +G++G AANV Sbjct: 89 EGEKGNEAANVT 100 >UniRef50_Q2P2A6 Major cold shock protein n=21 Tax=Gammaproteobacteria RepID=Q2P2A6_XANOM Length = 69 Score = 101 bits (252), Expect = 1e-20, Method: Composition-based stats. Identities = 39/70 (55%), Positives = 47/70 (67%), Gaps = 1/70 (1%) Query: 1 MSNKMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQR 60 MS +M G+VKWFN KGFGFITP+ G D+FVHF AIQ F++L E QKV F QGQ+ Sbjct: 1 MSERMNGIVKWFNDAKGFGFITPESG-PDLFVHFRAIQGTGFKSLQEGQKVTFVAVQGQK 59 Query: 61 GPAAANVVTL 70 G A V + Sbjct: 60 GMQADQVQAV 69 >UniRef50_A5VRM7 Cold-shock family protein n=37 Tax=Brucellaceae RepID=A5VRM7_BRUO2 Length = 105 Score = 100 bits (251), Expect = 1e-20, Method: Composition-based stats. Identities = 32/55 (58%), Positives = 37/55 (67%) Query: 6 TGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQR 60 TG VKWFN KGFGFI PD G DVFVH +A+Q TL+E QKV + I Q +R Sbjct: 44 TGTVKWFNTTKGFGFIQPDQGGTDVFVHISAVQRAGLTTLDEGQKVSYEIVQDRR 98 >UniRef50_A0NEN6 AGAP006108-PA n=4 Tax=Culicimorpha RepID=A0NEN6_ANOGA Length = 402 Score = 100 bits (250), Expect = 1e-20, Method: Composition-based stats. Identities = 31/72 (43%), Positives = 46/72 (63%), Gaps = 4/72 (5%) Query: 1 MSNKMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNE----FRTLNENQKVEFSIE 56 ++ K+TG+VKWFN G+GFI D +DVFVH +AI N R++ + ++VEF + Sbjct: 84 IATKVTGVVKWFNVKSGYGFINRGDTQEDVFVHQSAIARNNPKKAVRSVGDGEQVEFDVV 143 Query: 57 QGQRGPAAANVV 68 G++G AANV Sbjct: 144 IGEKGNEAANVT 155 >UniRef50_Q9Y2T7 Y-box-binding protein 2 n=21 Tax=Tetrapoda RepID=YBOX2_HUMAN Length = 364 Score = 100 bits (250), Expect = 1e-20, Method: Composition-based stats. Identities = 29/72 (40%), Positives = 45/72 (62%), Gaps = 4/72 (5%) Query: 1 MSNKMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNE----FRTLNENQKVEFSIE 56 ++ ++ G VKWFN G+GFI +D +DVFVH TAI+ N R++ + + VEF + Sbjct: 90 LAIQVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKRNNPRKFLRSVGDGETVEFDVV 149 Query: 57 QGQRGPAAANVV 68 +G++G A NV Sbjct: 150 EGEKGAEATNVT 161 >UniRef50_Q01761 Cold shock-like protein 7.0 n=356 Tax=cellular organisms RepID=CSP7_STRCL Length = 66 Score = 100 bits (250), Expect = 1e-20, Method: Composition-based stats. Identities = 37/64 (57%), Positives = 44/64 (68%), Gaps = 1/64 (1%) Query: 6 TGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPAAA 65 TG VKWFNA+KGFGFI D G DVFVH++AI + FR+L ENQ V F + G+ GP A Sbjct: 3 TGTVKWFNAEKGFGFIAQDGGGPDVFVHYSAINATGFRSLEENQVVNFDVTHGE-GPQAE 61 Query: 66 NVVT 69 NV Sbjct: 62 NVSP 65 >UniRef50_O46173 Y-box protein n=14 Tax=cellular organisms RepID=O46173_DROME Length = 359 Score = 100 bits (250), Expect = 2e-20, Method: Composition-based stats. Identities = 30/71 (42%), Positives = 44/71 (61%), Gaps = 3/71 (4%) Query: 1 MSNKMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAI---QSNEFRTLNENQKVEFSIEQ 57 ++ K+TG VKWFN G+GFI +D +DVFVH +AI R++ + + VEF + Sbjct: 59 IATKVTGTVKWFNVKSGYGFINRNDTREDVFVHQSAIANNPKKAVRSVGDGEVVEFDVVI 118 Query: 58 GQRGPAAANVV 68 G++G AANV Sbjct: 119 GEKGNEAANVT 129 >UniRef50_B5AU39 Y-box protein Lyb1 n=1 Tax=Lethenteron japonicum RepID=B5AU39_LAMJA Length = 331 Score = 100 bits (249), Expect = 2e-20, Method: Composition-based stats. Identities = 31/72 (43%), Positives = 46/72 (63%), Gaps = 4/72 (5%) Query: 1 MSNKMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNE----FRTLNENQKVEFSIE 56 ++ K+ G VKWFN G+GFI +D +DVFVH TAI+ N R++ + + VEF + Sbjct: 21 IATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGEVVEFDVV 80 Query: 57 QGQRGPAAANVV 68 +G++G AANV Sbjct: 81 EGEKGAEAANVT 92 >UniRef50_B5X2B2 Y-box-binding protein 2-A n=1 Tax=Salmo salar RepID=B5X2B2_SALSA Length = 328 Score = 100 bits (249), Expect = 2e-20, Method: Composition-based stats. Identities = 29/72 (40%), Positives = 43/72 (59%), Gaps = 4/72 (5%) Query: 1 MSNKMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNE----FRTLNENQKVEFSIE 56 ++ + G VKWFN G+GFI +D +DVFVH TAI+ N R++ + + VEF + Sbjct: 26 IATAVQGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKFLRSVGDGEVVEFDVV 85 Query: 57 QGQRGPAAANVV 68 + +G AANV Sbjct: 86 EAAKGSEAANVT 97 >UniRef50_Q3IC55 Cold shock protein n=52 Tax=Bacteria RepID=Q3IC55_PSEHT Length = 68 Score = 100 bits (249), Expect = 2e-20, Method: Composition-based stats. Identities = 37/65 (56%), Positives = 48/65 (73%), Gaps = 1/65 (1%) Query: 6 TGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPAAA 65 TG VKWFN KGFGFI + G DVF HF+AI S+ F+TL E Q+V+F++ QGQ+GP A Sbjct: 5 TGSVKWFNEAKGFGFIEQESG-PDVFAHFSAITSDGFKTLAEGQRVQFTVTQGQKGPQAE 63 Query: 66 NVVTL 70 N+V + Sbjct: 64 NIVCI 68 >UniRef50_UPI000155BE86 PREDICTED: hypothetical protein, partial n=1 Tax=Ornithorhynchus anatinus RepID=UPI000155BE86 Length = 223 Score = 100 bits (249), Expect = 2e-20, Method: Composition-based stats. Identities = 31/72 (43%), Positives = 46/72 (63%), Gaps = 4/72 (5%) Query: 1 MSNKMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNE----FRTLNENQKVEFSIE 56 ++ K+ G VKWFN G+GFI +D +DVFVH TAI+ N R++ + + VEF + Sbjct: 56 VATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDVV 115 Query: 57 QGQRGPAAANVV 68 +G++G AANV Sbjct: 116 EGEKGAEAANVT 127 >UniRef50_Q4FT63 Cold-shock DNA-binding protein family n=10 Tax=cellular organisms RepID=Q4FT63_PSYA2 Length = 71 Score = 100 bits (249), Expect = 2e-20, Method: Composition-based stats. Identities = 35/70 (50%), Positives = 48/70 (68%), Gaps = 1/70 (1%) Query: 1 MSNKMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQR 60 MS + G+VKWFN KGFGFI D G +D+FVHF AIQ + +R+L + +KVEFS+ +G + Sbjct: 1 MSAREQGIVKWFNDSKGFGFIQRDSG-EDIFVHFRAIQGDGYRSLKDGEKVEFSVVEGDK 59 Query: 61 GPAAANVVTL 70 G A V + Sbjct: 60 GLQAEEVRRV 69 >UniRef50_Q30QF0 Cold-shock DNA-binding protein family n=12 Tax=Proteobacteria RepID=Q30QF0_SULDN Length = 72 Score = 99.7 bits (248), Expect = 2e-20, Method: Composition-based stats. Identities = 34/72 (47%), Positives = 46/72 (63%), Gaps = 2/72 (2%) Query: 1 MSNKMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFR--TLNENQKVEFSIEQG 58 M+ + G VKWFN +KG+GFI ++G KDVFVHF + +L+E QKV F + +G Sbjct: 1 MAELLDGSVKWFNEEKGYGFIQQENGGKDVFVHFRQVNRTGPGRVSLSEGQKVTFELGEG 60 Query: 59 QRGPAAANVVTL 70 Q+GP A NV L Sbjct: 61 QKGPQAENVTPL 72 >UniRef50_P72192 Temperature acclimation protein B (Fragment) n=85 Tax=cellular organisms RepID=TAPB_PSEFR Length = 63 Score = 99.7 bits (248), Expect = 2e-20, Method: Composition-based stats. Identities = 38/64 (59%), Positives = 46/64 (71%), Gaps = 1/64 (1%) Query: 1 MSNKMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQR 60 MS + +G VKWFN +KGFGFITP+ G D+FVHF AIQ N F++L E QKV F QGQ+ Sbjct: 1 MSQRQSGTVKWFNDEKGFGFITPESG-PDLFVHFRAIQGNGFKSLKEGQKVTFIAVQGQK 59 Query: 61 GPAA 64 G A Sbjct: 60 GMQA 63 >UniRef50_A4RZ32 Predicted protein n=1 Tax=Ostreococcus lucimarinus CCE9901 RepID=A4RZ32_OSTLU Length = 106 Score = 99.7 bits (248), Expect = 3e-20, Method: Composition-based stats. Identities = 32/68 (47%), Positives = 44/68 (64%) Query: 1 MSNKMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQR 60 M+ + G VKWFNA KGFGFI P DGS+++FVH T I FR++ E ++VE+ ++ Sbjct: 1 MATRARGKVKWFNATKGFGFIIPHDGSEEIFVHQTGISCAGFRSVWEGEEVEYDVDDTDF 60 Query: 61 GPAAANVV 68 P A NV Sbjct: 61 APKAVNVT 68 >UniRef50_UPI0001555D69 PREDICTED: similar to LD37574p, partial n=1 Tax=Ornithorhynchus anatinus RepID=UPI0001555D69 Length = 281 Score = 99.7 bits (248), Expect = 3e-20, Method: Composition-based stats. Identities = 29/74 (39%), Positives = 44/74 (59%), Gaps = 4/74 (5%) Query: 1 MSNKMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEF----RTLNENQKVEFSIE 56 ++ ++ G+VKWFN G+GFI D +DVF+H +AI N R++ E + V+F + Sbjct: 32 LATRIVGVVKWFNVRHGYGFICRIDMQEDVFIHQSAIVRNNPRKCQRSVGEGEVVQFDLV 91 Query: 57 QGQRGPAAANVVTL 70 G +G AANV L Sbjct: 92 AGAKGTEAANVTGL 105 >UniRef50_P27484 Glycine-rich protein 2 n=5 Tax=Viridiplantae RepID=GRP2_NICSY Length = 214 Score = 99.3 bits (247), Expect = 3e-20, Method: Composition-based stats. Identities = 34/67 (50%), Positives = 44/67 (65%), Gaps = 1/67 (1%) Query: 3 NKMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGP 62 + G VKWF+ KGFGFITPDDG +D+FVH + I+S FR+L E + VEF +E G G Sbjct: 7 QRAKGTVKWFSDQKGFGFITPDDGGEDLFVHQSGIRSEGFRSLAEGETVEFEVESGGDGR 66 Query: 63 -AAANVV 68 A +V Sbjct: 67 TKAVDVT 73 >UniRef50_Q0BPU3 Cold shock protein n=2 Tax=Alphaproteobacteria RepID=Q0BPU3_GRABC Length = 100 Score = 99.3 bits (247), Expect = 4e-20, Method: Composition-based stats. Identities = 35/61 (57%), Positives = 43/61 (70%) Query: 5 MTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPAA 64 + G VKWFN KG+GFI P G KDVFVH +A+Q R+LNE Q+++F IEQ Q G AA Sbjct: 33 LHGTVKWFNPTKGYGFIAPSTGEKDVFVHISAVQRAGLRSLNEGQQLDFEIEQQQNGRAA 92 Query: 65 A 65 A Sbjct: 93 A 93 >UniRef50_C1F531 Cold shock protein n=1 Tax=Acidobacterium capsulatum ATCC 51196 RepID=C1F531_ACIC5 Length = 87 Score = 99.3 bits (247), Expect = 4e-20, Method: Composition-based stats. Identities = 36/66 (54%), Positives = 46/66 (69%), Gaps = 1/66 (1%) Query: 4 KMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPA 63 K G+VKWFN KG+GFI +DVFVHF+AIQ + ++TLNE + VEF +QG +G Sbjct: 21 KENGVVKWFNGAKGYGFIQR-STGEDVFVHFSAIQDSGYKTLNEGEAVEFECQQGPKGLN 79 Query: 64 AANVVT 69 AANVV Sbjct: 80 AANVVR 85 >UniRef50_A1U3R2 Cold-shock DNA-binding protein family n=3 Tax=Marinobacter RepID=A1U3R2_MARAV Length = 179 Score = 99.0 bits (246), Expect = 4e-20, Method: Composition-based stats. Identities = 30/64 (46%), Positives = 38/64 (59%), Gaps = 1/64 (1%) Query: 7 GLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPAAAN 66 G VKWFN KGFGFI D G + +FVHF AI+ R L + Q V F++ + +G A N Sbjct: 115 GTVKWFNVKKGFGFIVRDSGDE-IFVHFRAIRGRGRRVLRQGQLVRFNVVEADKGLQADN 173 Query: 67 VVTL 70 V L Sbjct: 174 VSIL 177 >UniRef50_A4XHY2 Cold-shock DNA-binding protein family n=3 Tax=cellular organisms RepID=A4XHY2_CALS8 Length = 66 Score = 99.0 bits (246), Expect = 4e-20, Method: Composition-based stats. Identities = 33/66 (50%), Positives = 45/66 (68%), Gaps = 1/66 (1%) Query: 5 MTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPAA 64 M G VKWFN +KG+GFI+ ++G DVFVHF+AI ++TL E Q VEF + + +RG A Sbjct: 1 MRGRVKWFNPEKGYGFISTENG-DDVFVHFSAINMEGYKTLAEGQMVEFDVVKSERGNQA 59 Query: 65 ANVVTL 70 NV + Sbjct: 60 VNVRKV 65 >UniRef50_Q4ZRK5 Cold-shock protein, DNA-binding n=10 Tax=Pseudomonas RepID=Q4ZRK5_PSEU2 Length = 92 Score = 98.6 bits (245), Expect = 5e-20, Method: Composition-based stats. Identities = 28/64 (43%), Positives = 40/64 (62%), Gaps = 1/64 (1%) Query: 5 MTGLVKWFNADKGFGFITPDD-GSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPA 63 + G VKWFN KGFGFI + +D+FVHF+AI+ + ++TL QKV F + G +G Sbjct: 2 IEGKVKWFNNAKGFGFINAEGKSDEDLFVHFSAIEMDGYKTLKAGQKVRFEVAHGPKGLQ 61 Query: 64 AANV 67 A + Sbjct: 62 AIKI 65 >UniRef50_O54310 Cold shock-like protein n=7 Tax=Bacteria RepID=CSP_THEMA Length = 66 Score = 98.6 bits (245), Expect = 5e-20, Method: Composition-based stats. Identities = 36/66 (54%), Positives = 50/66 (75%), Gaps = 1/66 (1%) Query: 5 MTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPAA 64 M G VKWF++ KG+GFIT D+G DVFVH++AI+ F+TL E Q VEF I++G++GP A Sbjct: 1 MRGKVKWFDSKKGYGFITKDEGG-DVFVHWSAIEMEGFKTLKEGQVVEFEIQEGKKGPQA 59 Query: 65 ANVVTL 70 A+V + Sbjct: 60 AHVKVV 65 >UniRef50_O67327 Cold shock-like protein n=2 Tax=Bacteria RepID=CSP_AQUAE Length = 70 Score = 98.6 bits (245), Expect = 5e-20, Method: Composition-based stats. Identities = 38/70 (54%), Positives = 48/70 (68%), Gaps = 2/70 (2%) Query: 1 MSNKMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQR 60 MS + G VKWF+ DKG+GFIT +D + DVFVHFT IQ F+TL + QKVEF + + + Sbjct: 1 MSFR--GTVKWFSKDKGYGFITREDTNADVFVHFTDIQMEGFKTLQKGQKVEFDVVEDTK 58 Query: 61 GPAAANVVTL 70 GP A NV L Sbjct: 59 GPRAKNVRVL 68 >UniRef50_O13015 Y box protein 2 n=4 Tax=Clupeocephala RepID=O13015_CARAU Length = 297 Score = 98.6 bits (245), Expect = 5e-20, Method: Composition-based stats. Identities = 29/72 (40%), Positives = 43/72 (59%), Gaps = 4/72 (5%) Query: 1 MSNKMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNE----FRTLNENQKVEFSIE 56 ++ + G VKWFN G+GFI +D +DVFVH TAI+ N R++ + + VEF + Sbjct: 17 IATGVEGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKFLRSVGDGEVVEFDVV 76 Query: 57 QGQRGPAAANVV 68 + +G AANV Sbjct: 77 EAAKGSEAANVT 88 >UniRef50_Q90WH1 Cold-shock domain protein (Fragment) n=4 Tax=Percomorpha RepID=Q90WH1_ORYLA Length = 366 Score = 98.6 bits (245), Expect = 5e-20, Method: Composition-based stats. Identities = 29/68 (42%), Positives = 41/68 (60%), Gaps = 4/68 (5%) Query: 5 MTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNE----FRTLNENQKVEFSIEQGQR 60 + G VKWFN G+GFI +D +DVFVH TAI+ N R++ + + VEF + + + Sbjct: 3 VQGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKFLRSVGDGEVVEFDVIEAAK 62 Query: 61 GPAAANVV 68 G AANV Sbjct: 63 GSEAANVT 70 >UniRef50_Q9AN51 Blr1947 protein n=2 Tax=Bradyrhizobium japonicum RepID=Q9AN51_BRAJA Length = 120 Score = 98.6 bits (245), Expect = 6e-20, Method: Composition-based stats. Identities = 29/64 (45%), Positives = 40/64 (62%) Query: 7 GLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPAAAN 66 G VKWFN KG+GF+ PDDG KDVFVH +A++ + +L E KV + + + G AA Sbjct: 56 GTVKWFNPTKGYGFVAPDDGGKDVFVHISAVEKAGYTSLVEGAKVGYELVTNRSGKQAAE 115 Query: 67 VVTL 70 + L Sbjct: 116 NLRL 119 >UniRef50_B8C1C4 Cold-shock DNA-binding domain-containing protein n=1 Tax=Thalassiosira pseudonana RepID=B8C1C4_THAPS Length = 136 Score = 98.6 bits (245), Expect = 6e-20, Method: Composition-based stats. Identities = 35/67 (52%), Positives = 46/67 (68%), Gaps = 1/67 (1%) Query: 3 NKMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRG- 61 +K+ G VKWF+A KGFGF+ PDDGS +VFVH +AI +N FR+L + + VEF + Q G Sbjct: 40 DKIKGTVKWFDAKKGFGFLVPDDGSAEVFVHHSAIHANGFRSLGDGEVVEFEVMQEPNGK 99 Query: 62 PAAANVV 68 A NV Sbjct: 100 WKALNVT 106 >UniRef50_D0MDE8 Cold-shock DNA-binding domain protein n=1 Tax=Rhodothermus marinus DSM 4252 RepID=D0MDE8_RHOM4 Length = 95 Score = 98.2 bits (244), Expect = 6e-20, Method: Composition-based stats. Identities = 33/71 (46%), Positives = 46/71 (64%), Gaps = 2/71 (2%) Query: 1 MSNKMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSN-EFRTLNENQKVEFSIEQGQ 59 M+ + G+VKWF+A KG+GFI +G D+FVH++ I S F+TL Q VEF + +G Sbjct: 1 MAAR-RGVVKWFDAKKGYGFIIHPEGGADIFVHYSQIISERRFKTLRTGQIVEFELHEGP 59 Query: 60 RGPAAANVVTL 70 +G A NVV L Sbjct: 60 KGLHARNVVPL 70 >UniRef50_B4U902 Cold-shock DNA-binding domain protein n=9 Tax=Bacteria RepID=B4U902_HYDS0 Length = 71 Score = 98.2 bits (244), Expect = 7e-20, Method: Composition-based stats. Identities = 35/68 (51%), Positives = 47/68 (69%), Gaps = 2/68 (2%) Query: 5 MTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQ--SNEFRTLNENQKVEFSIEQGQRGP 62 +TG VKWF+ +KG+GF+T DD DVFVHF+AI F+TL + Q+VEF ++Q +GP Sbjct: 3 ITGTVKWFSKEKGYGFLTRDDNQGDVFVHFSAIDPNRQGFKTLVQGQRVEFEVDQDSKGP 62 Query: 63 AAANVVTL 70 A NV L Sbjct: 63 RAKNVRVL 70 >UniRef50_B5A4M3 Glycine-rich nucleic acid binding protein n=1 Tax=Gymnochlora stellata RepID=B5A4M3_GYMST Length = 290 Score = 98.2 bits (244), Expect = 8e-20, Method: Composition-based stats. Identities = 31/69 (44%), Positives = 44/69 (63%), Gaps = 1/69 (1%) Query: 1 MSNKMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQR 60 + ++ +G KWFN KG+GFI P +G D+FVH TAI++ FR+L E ++VEF +E Sbjct: 20 LPDRQSGTCKWFNTVKGYGFILPQEGKDDIFVHQTAIKAVGFRSLAEGEQVEFDVEVDAT 79 Query: 61 GP-AAANVV 68 G A NV Sbjct: 80 GRKKARNVT 88 >UniRef50_C5RTX4 Cold-shock DNA-binding domain protein n=13 Tax=cellular organisms RepID=C5RTX4_9THEO Length = 67 Score = 98.2 bits (244), Expect = 8e-20, Method: Composition-based stats. Identities = 34/66 (51%), Positives = 49/66 (74%), Gaps = 1/66 (1%) Query: 5 MTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPAA 64 + G VKWFNA+KG+GFI +DG+ DVFVH++AI+ + F+TL E QKVEF + + +GP A Sbjct: 2 VRGKVKWFNAEKGYGFIEREDGT-DVFVHYSAIEGDGFKTLEEGQKVEFEVVEATKGPQA 60 Query: 65 ANVVTL 70 + V + Sbjct: 61 SKVRKV 66 >UniRef50_D1C6U7 Cold-shock DNA-binding domain protein n=1 Tax=Sphaerobacter thermophilus DSM 20745 RepID=D1C6U7_SPHTD Length = 77 Score = 97.8 bits (243), Expect = 8e-20, Method: Composition-based stats. Identities = 30/64 (46%), Positives = 41/64 (64%), Gaps = 3/64 (4%) Query: 6 TGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPAAA 65 TG VKW++ +KG+GFI DDG D+FVH +AI +E LNE +VEF + +GP A Sbjct: 3 TGTVKWYDPEKGYGFIARDDGDSDLFVHRSAISGSE---LNEGDRVEFDVTSSPKGPRAE 59 Query: 66 NVVT 69 +V Sbjct: 60 HVRV 63 >UniRef50_B4SCC3 Cold-shock DNA-binding domain protein n=4 Tax=cellular organisms RepID=B4SCC3_PELPB Length = 69 Score = 97.8 bits (243), Expect = 9e-20, Method: Composition-based stats. Identities = 33/70 (47%), Positives = 42/70 (60%), Gaps = 1/70 (1%) Query: 1 MSNKMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQR 60 M ++ G VKWFN +KG+GFI G KDVFVH +AI +TL E QKV + QG + Sbjct: 1 MGTQVEGTVKWFNEEKGYGFIEQ-KGGKDVFVHHSAINGTGRKTLVEGQKVMMEVTQGAK 59 Query: 61 GPAAANVVTL 70 G A +V L Sbjct: 60 GLQAEDVTPL 69 >UniRef50_P95459 Major cold shock protein cspA n=33 Tax=cellular organisms RepID=CSPA_PSEAE Length = 69 Score = 97.8 bits (243), Expect = 9e-20, Method: Composition-based stats. Identities = 37/70 (52%), Positives = 47/70 (67%), Gaps = 1/70 (1%) Query: 1 MSNKMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQR 60 MSN+ G VKWFN KGFGFITP+ G+ D+FVHF +IQ F++L E QKV F + GQ+ Sbjct: 1 MSNRQNGTVKWFNDAKGFGFITPESGN-DLFVHFRSIQGTGFKSLQEGQKVSFVVVNGQK 59 Query: 61 GPAAANVVTL 70 G A V + Sbjct: 60 GLQADEVQVV 69 >UniRef50_C8P136 Conserved domain protein n=6 Tax=Bacteria RepID=C8P136_ERYRH Length = 66 Score = 97.8 bits (243), Expect = 1e-19, Method: Composition-based stats. Identities = 33/65 (50%), Positives = 49/65 (75%), Gaps = 1/65 (1%) Query: 6 TGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPAAA 65 TG VK+FNA+KG+GFIT + G +D+FVH++AI ++ ++TL E Q+V F + +G RG AA Sbjct: 3 TGKVKFFNAEKGYGFITIE-GGQDIFVHYSAIVADGYKTLEEGQEVSFEVVEGPRGEQAA 61 Query: 66 NVVTL 70 NV + Sbjct: 62 NVRGI 66 >UniRef50_O65639 Glycine-rich protein n=10 Tax=cellular organisms RepID=O65639_ARATH Length = 299 Score = 97.4 bits (242), Expect = 1e-19, Method: Composition-based stats. Identities = 35/69 (50%), Positives = 45/69 (65%), Gaps = 1/69 (1%) Query: 2 SNKMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRG 61 + + TG V WFNA KG+GFITPDDGS ++FVH ++I S +R+L VEF+I QG G Sbjct: 8 AARSTGKVNWFNASKGYGFITPDDGSVELFVHQSSIVSEGYRSLTVGDAVEFAITQGSDG 67 Query: 62 P-AAANVVT 69 A NV Sbjct: 68 KTKAVNVTA 76 >UniRef50_C4QN75 Y box binding protein, putative n=10 Tax=cellular organisms RepID=C4QN75_SCHMA Length = 231 Score = 97.4 bits (242), Expect = 1e-19, Method: Composition-based stats. Identities = 30/72 (41%), Positives = 43/72 (59%), Gaps = 4/72 (5%) Query: 1 MSNKMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEF----RTLNENQKVEFSIE 56 M ++ G+VKWFN G+GFI D S D+FVH +AI N R+L E ++VEF + Sbjct: 22 MEERVKGVVKWFNVKAGYGFINRQDTSTDIFVHQSAISRNNPEKLQRSLQEGEEVEFYVV 81 Query: 57 QGQRGPAAANVV 68 +G +G A+ V Sbjct: 82 EGDKGDEASEVT 93 >UniRef50_C4QN73 Y box binding protein, putative n=4 Tax=Bilateria RepID=C4QN73_SCHMA Length = 167 Score = 97.0 bits (241), Expect = 1e-19, Method: Composition-based stats. Identities = 30/72 (41%), Positives = 43/72 (59%), Gaps = 4/72 (5%) Query: 1 MSNKMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEF----RTLNENQKVEFSIE 56 M ++ G+VKWFN G+GFI D S D+FVH +AI N R+L E ++VEF + Sbjct: 22 MEERVKGVVKWFNVKAGYGFINRQDTSTDIFVHQSAISRNNPEKLQRSLQEGEEVEFYVV 81 Query: 57 QGQRGPAAANVV 68 +G +G A+ V Sbjct: 82 EGDKGDEASEVT 93 >UniRef50_Q5CVY2 Cold shock RNA binding domain of the OB fold (Fragment) n=2 Tax=Cryptosporidium RepID=Q5CVY2_CRYPV Length = 135 Score = 97.0 bits (241), Expect = 1e-19, Method: Composition-based stats. Identities = 32/64 (50%), Positives = 47/64 (73%), Gaps = 1/64 (1%) Query: 5 MTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRG-PA 63 ++G+ KWF++ KGFGFITPDDGS+D+FVH I+ FR+L ++++VE+ IE +G Sbjct: 11 LSGVCKWFDSTKGFGFITPDDGSEDIFVHQQNIKVEGFRSLAQDERVEYEIETDDKGRRK 70 Query: 64 AANV 67 A NV Sbjct: 71 AVNV 74 >UniRef50_C0QFU1 CspA n=4 Tax=cellular organisms RepID=C0QFU1_DESAH Length = 66 Score = 97.0 bits (241), Expect = 1e-19, Method: Composition-based stats. Identities = 37/64 (57%), Positives = 47/64 (73%), Gaps = 1/64 (1%) Query: 7 GLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPAAAN 66 G VKWFN KGFGFI ++G +DVFVH + I ++ F++LNE KV F IEQGQ+GPAA N Sbjct: 4 GTVKWFNDSKGFGFIEQENG-EDVFVHHSGINASGFKSLNEGDKVTFDIEQGQKGPAATN 62 Query: 67 VVTL 70 V + Sbjct: 63 VTVV 66 >UniRef50_UPI0000F32A39 PREDICTED: Bos taurus similar to transcription factor EF1(A) (LOC783156), mRNA. n=2 Tax=Laurasiatheria RepID=UPI0000F32A39 Length = 313 Score = 97.0 bits (241), Expect = 1e-19, Method: Composition-based stats. Identities = 30/72 (41%), Positives = 44/72 (61%), Gaps = 5/72 (6%) Query: 1 MSNKMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNE----FRTLNENQKVEFSIE 56 ++ K+ G VKWFN G+GFI +D +DVFVH TAI+ N R++ + + EF + Sbjct: 55 IATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGET-EFDVV 113 Query: 57 QGQRGPAAANVV 68 +G +G AANV Sbjct: 114 EGGKGAEAANVT 125 >UniRef50_C4FWF1 Putative uncharacterized protein n=1 Tax=Catonella morbi ATCC 51271 RepID=C4FWF1_9FIRM Length = 90 Score = 97.0 bits (241), Expect = 2e-19, Method: Composition-based stats. Identities = 35/66 (53%), Positives = 46/66 (69%), Gaps = 1/66 (1%) Query: 5 MTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPAA 64 + G VK+FN DKGFGFI DG DVFVHF+ IQ++ F+TLNE Q V + +++ RG A Sbjct: 26 LNGTVKFFNVDKGFGFIAGQDG-VDVFVHFSNIQADGFKTLNEGQTVSYDVQETSRGLQA 84 Query: 65 ANVVTL 70 NVV + Sbjct: 85 INVVAI 90 >UniRef50_C4WSK9 ACYPI003867 protein n=1 Tax=Acyrthosiphon pisum RepID=C4WSK9_ACYPI Length = 305 Score = 97.0 bits (241), Expect = 2e-19, Method: Composition-based stats. Identities = 31/72 (43%), Positives = 47/72 (65%), Gaps = 4/72 (5%) Query: 1 MSNKMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNE----FRTLNENQKVEFSIE 56 +S K+TG+VKWFN G+GFI +D +D+FVH +AI N R++ + + VEF + Sbjct: 24 ISVKVTGVVKWFNVKSGYGFINRNDTKEDIFVHQSAIIKNNPKKIVRSVGDGETVEFDVV 83 Query: 57 QGQRGPAAANVV 68 +G++G AANV Sbjct: 84 EGEKGHEAANVT 95 >UniRef50_UPI00017B0A95 UPI00017B0A95 related cluster n=1 Tax=Tetraodon nigroviridis RepID=UPI00017B0A95 Length = 321 Score = 97.0 bits (241), Expect = 2e-19, Method: Composition-based stats. Identities = 29/73 (39%), Positives = 44/73 (60%), Gaps = 5/73 (6%) Query: 1 MSNKMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNE----FRTLNENQKVEFSIE 56 ++ + G VKWFN G+GFI +D +DVFVH TAI+ N R++ + + VEF + Sbjct: 26 IATLVQGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKRNNPRKFLRSVGDGELVEFDVI 85 Query: 57 Q-GQRGPAAANVV 68 + ++G AANV Sbjct: 86 EAAKKGSEAANVT 98 >UniRef50_Q1RLA8 Zinc finger protein n=1 Tax=Ciona intestinalis RepID=Q1RLA8_CIOIN Length = 193 Score = 96.7 bits (240), Expect = 2e-19, Method: Composition-based stats. Identities = 29/65 (44%), Positives = 41/65 (63%), Gaps = 3/65 (4%) Query: 7 GLVKWFNADKGFGFITPDDGSK---DVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPA 63 G KWFN+ +G+GFITPD S+ DVFVH ++I FR+L E +V+F + ++G Sbjct: 29 GNCKWFNSKQGYGFITPDTSSQEKTDVFVHQSSIDMEGFRSLQEGDRVKFWYKPSKKGLE 88 Query: 64 AANVV 68 A VV Sbjct: 89 AVKVV 93 >UniRef50_UPI000051480C PREDICTED: similar to ypsilon schachtel CG5654-PA n=2 Tax=Apocrita RepID=UPI000051480C Length = 279 Score = 96.7 bits (240), Expect = 2e-19, Method: Composition-based stats. Identities = 32/72 (44%), Positives = 46/72 (63%), Gaps = 4/72 (5%) Query: 1 MSNKMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNE----FRTLNENQKVEFSIE 56 ++NK+TG VKWFN G+GFI +D +DVFVH +AI N R++ + + VEF + Sbjct: 20 IANKVTGTVKWFNVKSGYGFINRNDTKEDVFVHQSAIVKNNPRKAVRSVGDGEVVEFDVV 79 Query: 57 QGQRGPAAANVV 68 G++G AANV Sbjct: 80 IGEKGHEAANVT 91 >UniRef50_A1U1H2 Cold-shock DNA-binding protein family n=5 Tax=Gammaproteobacteria RepID=A1U1H2_MARAV Length = 103 Score = 96.7 bits (240), Expect = 2e-19, Method: Composition-based stats. Identities = 27/63 (42%), Positives = 38/63 (60%) Query: 7 GLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPAAAN 66 G VKWFN KG+GFI D S D+F HF+++Q + ++TL Q V F + +G A N Sbjct: 4 GKVKWFNNAKGYGFIIEDGCSDDLFAHFSSVQMDGYKTLKAGQTVTFDKKPSDKGVHAIN 63 Query: 67 VVT 69 +V Sbjct: 64 IVP 66 >UniRef50_D1H869 Whole genome shotgun sequence of line PN40024, scaffold_23.assembly12x (Fragment) n=1 Tax=Vitis vinifera RepID=D1H869_VITVI Length = 208 Score = 96.7 bits (240), Expect = 2e-19, Method: Composition-based stats. Identities = 32/67 (47%), Positives = 48/67 (71%), Gaps = 1/67 (1%) Query: 3 NKMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGP 62 + TG+V+WF+ KGFGFITP++G +D+FVH ++I+S+ FR+L E + VEF I G+ G Sbjct: 4 ERSTGVVRWFSDQKGFGFITPNEGGEDLFVHQSSIKSDGFRSLGEGETVEFQIVLGEDGR 63 Query: 63 -AAANVV 68 A +V Sbjct: 64 TKAVDVT 70 >UniRef50_Q11GE9 Cold-shock DNA-binding protein family n=10 Tax=Alphaproteobacteria RepID=Q11GE9_MESSB Length = 70 Score = 96.7 bits (240), Expect = 2e-19, Method: Composition-based stats. Identities = 35/63 (55%), Positives = 47/63 (74%), Gaps = 2/63 (3%) Query: 6 TGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQ--RGPA 63 TG VK+FNA KGFGFITPD+G KDVFVH +A++++ R+L + QKV F +E + +GP Sbjct: 4 TGTVKFFNATKGFGFITPDNGQKDVFVHISAVEASGMRSLVDGQKVSFDVEPDRMGKGPK 63 Query: 64 AAN 66 A N Sbjct: 64 AVN 66 >UniRef50_A5N624 CspA n=10 Tax=cellular organisms RepID=A5N624_CLOK5 Length = 67 Score = 96.3 bits (239), Expect = 2e-19, Method: Composition-based stats. Identities = 43/66 (65%), Positives = 49/66 (74%), Gaps = 2/66 (3%) Query: 6 TGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFR-TLNENQKVEFSIEQGQRGPAA 64 TG VKWFN++KGFGFI G DVFVHFTAIQSNE R L E QKV+F +E+G +G A Sbjct: 3 TGTVKWFNSEKGFGFIEVP-GENDVFVHFTAIQSNEARKNLEEGQKVQFDVEEGPKGLQA 61 Query: 65 ANVVTL 70 ANVV L Sbjct: 62 ANVVKL 67 >UniRef50_A8I8L3 Cold-shock DNA-binding domain n=1 Tax=Azorhizobium caulinodans ORS 571 RepID=A8I8L3_AZOC5 Length = 117 Score = 96.3 bits (239), Expect = 2e-19, Method: Composition-based stats. Identities = 32/66 (48%), Positives = 43/66 (65%), Gaps = 1/66 (1%) Query: 6 TGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQR-GPAA 64 TG VKWFN +KGFGFI PDDG D FVH +A++ L E QKV + + +R G ++ Sbjct: 50 TGTVKWFNPEKGFGFIAPDDGGADAFVHISAVERAGLPPLREGQKVNYDLVADKRSGKSS 109 Query: 65 ANVVTL 70 A+ +TL Sbjct: 110 ASNLTL 115 >UniRef50_B0UEI2 Cold-shock DNA-binding domain protein n=11 Tax=Alphaproteobacteria RepID=B0UEI2_METS4 Length = 242 Score = 96.3 bits (239), Expect = 3e-19, Method: Composition-based stats. Identities = 28/68 (41%), Positives = 43/68 (63%) Query: 2 SNKMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRG 61 S +M+G VKW++ KGFGF++ DG KDVFVH +A+ +L E Q+V + +GQ+G Sbjct: 173 STEMSGTVKWYDPAKGFGFVSVKDGGKDVFVHRSALARAGLDSLAEGQQVTMGVVEGQKG 232 Query: 62 PAAANVVT 69 A ++ Sbjct: 233 REAQSITV 240 Score = 76.6 bits (188), Expect = 2e-13, Method: Composition-based stats. Identities = 24/63 (38%), Positives = 36/63 (57%) Query: 8 LVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPAAANV 67 VKWFN +KGFGF+ DGS D F+H A+++ L ++ QGQ+GP N+ Sbjct: 65 TVKWFNKEKGFGFVELGDGSGDAFLHIRAVEAAGHADLLPGTRLTVQTAQGQKGPQVTNI 124 Query: 68 VTL 70 ++ Sbjct: 125 TSV 127 >UniRef50_B0S1I2 Cold shock protein n=4 Tax=cellular organisms RepID=B0S1I2_FINM2 Length = 67 Score = 96.3 bits (239), Expect = 3e-19, Method: Composition-based stats. Identities = 38/66 (57%), Positives = 46/66 (69%), Gaps = 2/66 (3%) Query: 6 TGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNE-FRTLNENQKVEFSIEQGQRGPAA 64 G VKWFNA KGFGFI+ +D DVFVH+TAI+ N +R L ENQ+VEF I +G +G A Sbjct: 3 KGKVKWFNATKGFGFISTEDQG-DVFVHYTAIEDNGEYRKLEENQEVEFEISEGPKGLQA 61 Query: 65 ANVVTL 70 NV L Sbjct: 62 CNVKKL 67 >UniRef50_A9W6T1 Cold-shock protein DNA-binding n=32 Tax=Bacteria RepID=A9W6T1_METEP Length = 281 Score = 95.9 bits (238), Expect = 4e-19, Method: Composition-based stats. Identities = 29/68 (42%), Positives = 45/68 (66%) Query: 2 SNKMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRG 61 S +MTG VKW++ KGFGF++ +DG KDVFVH +A+ +L E Q+V + +GQ+G Sbjct: 212 SVEMTGTVKWYDPAKGFGFVSVNDGGKDVFVHRSALSRAGLDSLAEGQQVTLGVVEGQKG 271 Query: 62 PAAANVVT 69 A+++ Sbjct: 272 REASSITV 279 Score = 73.2 bits (179), Expect = 2e-12, Method: Composition-based stats. Identities = 24/60 (40%), Positives = 33/60 (55%) Query: 8 LVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPAAANV 67 VKWFN +KGFGF+ DGS D F+H A+++ L ++ QGQ+GP V Sbjct: 81 TVKWFNKEKGFGFVELGDGSGDAFLHIRAVEAAGHDDLLPGTRLTVQTAQGQKGPQVTAV 140 >UniRef50_A4A3Y7 Cold-shock domain family protein n=2 Tax=unclassified Gammaproteobacteria RepID=A4A3Y7_9GAMM Length = 189 Score = 95.5 bits (237), Expect = 4e-19, Method: Composition-based stats. Identities = 25/64 (39%), Positives = 35/64 (54%), Gaps = 1/64 (1%) Query: 7 GLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPAAAN 66 G VKWFN KGFGFI ++G + +FVH +I R+L + V + + +GP A Sbjct: 126 GTVKWFNGTKGFGFIIRENGDE-IFVHHRSIIGEGRRSLRDGAPVRYRVVTTDKGPQAEE 184 Query: 67 VVTL 70 V L Sbjct: 185 VEAL 188 >UniRef50_Q1J0P4 Cold-shock DNA-binding domain protein n=9 Tax=Bacteria RepID=Q1J0P4_DEIGD Length = 87 Score = 95.5 bits (237), Expect = 5e-19, Method: Composition-based stats. Identities = 38/65 (58%), Positives = 48/65 (73%), Gaps = 3/65 (4%) Query: 7 GLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQ--RGPAA 64 G VKWFNA+KG+GFI + GS+DVF HF+AIQ+ F+ LNE +VEF IE GQ +GP A Sbjct: 4 GKVKWFNAEKGYGFIETE-GSEDVFAHFSAIQAQGFKKLNEGDEVEFEIEPGQRGKGPQA 62 Query: 65 ANVVT 69 N+V Sbjct: 63 RNIVV 67 >UniRef50_D0LU49 Cold-shock DNA-binding domain protein n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LU49_HALO1 Length = 94 Score = 95.1 bits (236), Expect = 5e-19, Method: Composition-based stats. Identities = 30/64 (46%), Positives = 45/64 (70%), Gaps = 1/64 (1%) Query: 6 TGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPAAA 65 TG VKWFN KG+GFI +DG +DVFVH++ I ++ +R L E + VE+ +++G +G AA Sbjct: 3 TGAVKWFNNVKGYGFILREDG-QDVFVHWSNILADGYRLLTEGEIVEYELQEGPKGLFAA 61 Query: 66 NVVT 69 V + Sbjct: 62 QVKS 65 >UniRef50_D0KX28 Cold-shock DNA-binding domain protein n=1 Tax=Halothiobacillus neapolitanus c2 RepID=D0KX28_HALNC Length = 143 Score = 95.1 bits (236), Expect = 5e-19, Method: Composition-based stats. Identities = 35/67 (52%), Positives = 44/67 (65%), Gaps = 1/67 (1%) Query: 4 KMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPA 63 + G VKWFN DKGFGFI ++G +D+FVHF A+ L E QKVE+ I QG++GP Sbjct: 77 REVGHVKWFNTDKGFGFIVRENG-EDLFVHFRAVGDGSTLQLVEGQKVEYHIGQGRKGPQ 135 Query: 64 AANVVTL 70 A VV L Sbjct: 136 AEQVVIL 142 >UniRef50_Q0SKK0 Cold shock protein n=1 Tax=Rhodococcus jostii RHA1 RepID=Q0SKK0_RHOSR Length = 119 Score = 95.1 bits (236), Expect = 6e-19, Method: Composition-based stats. Identities = 29/64 (45%), Positives = 42/64 (65%) Query: 6 TGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPAAA 65 TG V+WFNA++GFGF+ P DGS D+FVH + I + R L E Q+V F++ + + G A Sbjct: 55 TGTVRWFNAEQGFGFLAPADGSDDIFVHVSEIAGDGHRILEEGQRVSFAVCRTETGDQAR 114 Query: 66 NVVT 69 +V Sbjct: 115 DVRI 118 >UniRef50_A7HXE8 Putative cold-shock DNA-binding domain protein n=1 Tax=Parvibaculum lavamentivorans DS-1 RepID=A7HXE8_PARL1 Length = 199 Score = 95.1 bits (236), Expect = 6e-19, Method: Composition-based stats. Identities = 26/70 (37%), Positives = 41/70 (58%) Query: 1 MSNKMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQR 60 +S ++TG+VKWF+A KG+GFI P++G DV VH + ++ L+E V + + Sbjct: 34 VSFEITGVVKWFDAVKGYGFIIPENGGDDVLVHLSCLKQAGLEALDEGTTVTCEAVRRPK 93 Query: 61 GPAAANVVTL 70 G A VV + Sbjct: 94 GAQAIRVVDV 103 Score = 72.4 bits (177), Expect = 4e-12, Method: Composition-based stats. Identities = 19/62 (30%), Positives = 34/62 (54%) Query: 8 LVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPAAANV 67 +VKWFN +G+GF+T +G+ D+F+H ++ R L Q++ +G +G A + Sbjct: 137 IVKWFNRARGYGFVTRGEGTPDIFIHMETLRRYGIRDLLPGQQINVRFGEGPKGLMVAEI 196 Query: 68 VT 69 Sbjct: 197 AP 198 >UniRef50_D1A5P8 Cold-shock DNA-binding domain protein n=33 Tax=Actinobacteridae RepID=D1A5P8_THECD Length = 135 Score = 95.1 bits (236), Expect = 6e-19, Method: Composition-based stats. Identities = 33/65 (50%), Positives = 45/65 (69%), Gaps = 2/65 (3%) Query: 6 TGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPAAA 65 TG VKW++A KGFGF+T DDG + VFVH +A+ S +L Q+VEF + +G+RG A Sbjct: 7 TGKVKWYDAGKGFGFLTRDDGGE-VFVHSSALPS-GVTSLKTGQRVEFGVVEGRRGQQAL 64 Query: 66 NVVTL 70 +V TL Sbjct: 65 SVRTL 69 >UniRef50_O62213 Protein F33A8.3, confirmed by transcript evidence n=2 Tax=Caenorhabditis RepID=O62213_CAEEL Length = 208 Score = 94.7 bits (235), Expect = 7e-19, Method: Composition-based stats. Identities = 31/71 (43%), Positives = 45/71 (63%), Gaps = 4/71 (5%) Query: 2 SNKMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNE----FRTLNENQKVEFSIEQ 57 + K+ G VKWFN G+GFI D ++D+FVH TAI +N R+L +N++V F I + Sbjct: 18 ATKVKGTVKWFNVKNGYGFINRTDTNEDIFVHQTAIINNNPNKYLRSLGDNEEVMFDIVE 77 Query: 58 GQRGPAAANVV 68 G +G AA+V Sbjct: 78 GSKGLEAASVT 88 >UniRef50_D0MCR5 Cold-shock DNA-binding domain protein n=1 Tax=Rhodothermus marinus DSM 4252 RepID=D0MCR5_RHOM4 Length = 76 Score = 94.3 bits (234), Expect = 9e-19, Method: Composition-based stats. Identities = 32/71 (45%), Positives = 45/71 (63%), Gaps = 3/71 (4%) Query: 1 MSNKMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEF-RTLNENQKVEFSIEQGQ 59 M+ + G VKWFN DKG+GFI P+DGSKDVFVH + + L E ++V + +E+ Sbjct: 1 MAQR--GRVKWFNIDKGYGFIEPNDGSKDVFVHRNNVPGLGWDEGLREGEEVSYEVERTP 58 Query: 60 RGPAAANVVTL 70 +G +A NV L Sbjct: 59 KGLSAMNVERL 69 >UniRef50_P55390 Probable cold shock protein y4cH n=110 Tax=Proteobacteria RepID=Y4CH_RHISN Length = 69 Score = 94.3 bits (234), Expect = 9e-19, Method: Composition-based stats. Identities = 29/55 (52%), Positives = 39/55 (70%) Query: 6 TGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQR 60 TG VKWFNA KGFGFI PDDGS DVFVH +A++ R L + QK+ + + + ++ Sbjct: 4 TGTVKWFNATKGFGFIQPDDGSADVFVHISAVERAGLRELKDGQKISYELVKDRK 58 >UniRef50_Q38896 Glycine-rich protein 2b n=125 Tax=cellular organisms RepID=GRP2B_ARATH Length = 201 Score = 94.3 bits (234), Expect = 1e-18, Method: Composition-based stats. Identities = 32/66 (48%), Positives = 42/66 (63%), Gaps = 1/66 (1%) Query: 3 NKMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRG- 61 ++ G VKWF+ KGFGFITP DG D+FVH ++I+S FR+L + VEF +E G Sbjct: 13 DRRKGTVKWFDTQKGFGFITPSDGGDDLFVHQSSIRSEGFRSLAAEESVEFDVEVDNSGR 72 Query: 62 PAAANV 67 P A V Sbjct: 73 PKAIEV 78 >UniRef50_UPI00004F1407 PREDICTED: similar to CSDA protein n=1 Tax=Bos taurus RepID=UPI00004F1407 Length = 323 Score = 94.0 bits (233), Expect = 1e-18, Method: Composition-based stats. Identities = 30/72 (41%), Positives = 44/72 (61%), Gaps = 4/72 (5%) Query: 1 MSNKMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNE---FR-TLNENQKVEFSIE 56 +S ++ G V WF KG+GFI+ D +DVFVH TAI +R ++++ + VEF + Sbjct: 64 ISKRVLGTVVWFKEKKGYGFISRQDTQEDVFVHHTAITGKNPCTYRGSVDDGEMVEFDVV 123 Query: 57 QGQRGPAAANVV 68 QG+ G AANV Sbjct: 124 QGEWGTEAANVT 135 >UniRef50_B3QZU5 Cold shock-like protein n=1 Tax=Candidatus Phytoplasma mali AT RepID=B3QZU5_PHYMT Length = 85 Score = 94.0 bits (233), Expect = 1e-18, Method: Composition-based stats. Identities = 31/71 (43%), Positives = 48/71 (67%), Gaps = 1/71 (1%) Query: 1 MSNKMTGLVKWFNADKGFGFITP-DDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQ 59 + K+ G+ +WFN DKGFGF+ D S+D+F H T I+ FR+L+E ++VEF++ QG+ Sbjct: 9 CTEKIKGVCRWFNKDKGFGFLQKLDSDSQDIFFHQTDIKCEGFRSLDEGEEVEFTLVQGE 68 Query: 60 RGPAAANVVTL 70 +GP A +V Sbjct: 69 KGPQAIEIVRF 79 >UniRef50_B9F7B8 Putative uncharacterized protein n=1 Tax=Oryza sativa Japonica Group RepID=B9F7B8_ORYSJ Length = 233 Score = 94.0 bits (233), Expect = 1e-18, Method: Composition-based stats. Identities = 28/71 (39%), Positives = 48/71 (67%), Gaps = 1/71 (1%) Query: 1 MSNKMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQR 60 +S ++ G VK F+A GFGFITPDD +D+F+H ++++ +++R+LN++ +E S+ G Sbjct: 2 VSERVKGTVKGFDATNGFGFITPDDDGEDLFIHQSSLKFDDYRSLNDSDVIELSVGSGND 61 Query: 61 GP-AAANVVTL 70 G A +V L Sbjct: 62 GRNKAVDVTAL 72 >UniRef50_B7RWZ3 'Cold-shock' DNA-binding domain protein n=1 Tax=marine gamma proteobacterium HTCC2148 RepID=B7RWZ3_9GAMM Length = 145 Score = 94.0 bits (233), Expect = 1e-18, Method: Composition-based stats. Identities = 32/67 (47%), Positives = 40/67 (59%), Gaps = 1/67 (1%) Query: 4 KMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPA 63 + G VKWFN KGFGFIT DDG +++FVHF +I R L + Q+V F +GP Sbjct: 80 REEGEVKWFNVSKGFGFITKDDG-EEIFVHFRSIIGEGRRGLKDGQRVSFVEANTDKGPQ 138 Query: 64 AANVVTL 70 A NV L Sbjct: 139 AENVEPL 145 >UniRef50_A8ILK3 Cold shock protein n=9 Tax=Proteobacteria RepID=A8ILK3_AZOC5 Length = 237 Score = 93.2 bits (231), Expect = 3e-18, Method: Composition-based stats. Identities = 28/66 (42%), Positives = 40/66 (60%) Query: 2 SNKMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRG 61 + + G VKW+N +KGFGFI + G KDVFVH T + + L+E Q+V + QG +G Sbjct: 168 TEERVGTVKWYNPEKGFGFIAVEGGGKDVFVHVTVVSRSGLADLSEGQRVVVQVGQGPKG 227 Query: 62 PAAANV 67 P A + Sbjct: 228 PEARGI 233 Score = 77.4 bits (190), Expect = 1e-13, Method: Composition-based stats. Identities = 24/63 (38%), Positives = 37/63 (58%) Query: 8 LVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPAAANV 67 VKWFN +KGFGF+ DGS DVF+H A+++ ++ K+ + QGQ+G V Sbjct: 69 TVKWFNPEKGFGFVELSDGSGDVFLHARALEAAGQESVPPGSKLSVRVGQGQKGRQVTEV 128 Query: 68 VTL 70 + + Sbjct: 129 LEV 131 >UniRef50_B4RGZ9 Cold-shock DNA-binding domain protein n=75 Tax=Bacteria RepID=B4RGZ9_PHEZH Length = 250 Score = 92.8 bits (230), Expect = 3e-18, Method: Composition-based stats. Identities = 33/71 (46%), Positives = 44/71 (61%), Gaps = 1/71 (1%) Query: 1 MSNKMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQR 60 + +G VKWFN KGFGFI PDDG +DVFVH +A+ LNE +VE+ +EQ +R Sbjct: 53 LRRMASGTVKWFNTAKGFGFIQPDDGGQDVFVHISAVAQAGLDALNEGDQVEYELEQDRR 112 Query: 61 -GPAAANVVTL 70 G AA + + Sbjct: 113 SGKLAATSIVV 123 Score = 88.9 bits (220), Expect = 4e-17, Method: Composition-based stats. Identities = 28/55 (50%), Positives = 39/55 (70%) Query: 6 TGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQR 60 +G+VKWFN KGFGFI P+ G +D+FVH +A++ LNE Q V+F +EQ +R Sbjct: 183 SGVVKWFNPTKGFGFIKPEGGGQDIFVHISAVEQAGLSGLNEGQTVDFDLEQDRR 237 >UniRef50_Q2S0T4 Conserved domain protein n=2 Tax=Bacteria RepID=Q2S0T4_SALRD Length = 110 Score = 92.8 bits (230), Expect = 3e-18, Method: Composition-based stats. Identities = 31/66 (46%), Positives = 42/66 (63%), Gaps = 1/66 (1%) Query: 6 TGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQS-NEFRTLNENQKVEFSIEQGQRGPAA 64 T VKWF+A KG+GFI D +DVFVH++ IQS ++F+TL +Q V F + G +G A Sbjct: 3 TSTVKWFDAKKGYGFIHHPDDGEDVFVHYSNIQSDDDFKTLKSDQHVRFEMNDGPKGLHA 62 Query: 65 ANVVTL 70 V L Sbjct: 63 LEVAPL 68 >UniRef50_B3EP04 Cold-shock DNA-binding domain protein n=13 Tax=Chlorobiaceae RepID=B3EP04_CHLPB Length = 96 Score = 92.4 bits (229), Expect = 4e-18, Method: Composition-based stats. Identities = 35/71 (49%), Positives = 47/71 (66%), Gaps = 3/71 (4%) Query: 1 MSNKMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSN-EFRTLNENQKVEFSIEQGQ 59 MS K VKWF+ KG+GFI DG +D+FVHF+AI S F+ LN++ +VEF I+Q Q Sbjct: 1 MSRKS--KVKWFDGKKGYGFIVNPDGGEDIFVHFSAIVSEQSFKVLNQDAEVEFEIDQTQ 58 Query: 60 RGPAAANVVTL 70 +G A NV + Sbjct: 59 KGMQAKNVCEI 69 >UniRef50_Q47TE2 Cold-shock DNA-binding protein family n=9 Tax=Actinobacteria (class) RepID=Q47TE2_THEFY Length = 127 Score = 92.4 bits (229), Expect = 4e-18, Method: Composition-based stats. Identities = 31/65 (47%), Positives = 42/65 (64%), Gaps = 2/65 (3%) Query: 6 TGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPAAA 65 TG VKW++A KGFGF+T DDG + VF+H +A+ TL Q+VEF I +G++G A Sbjct: 3 TGKVKWYDAGKGFGFLTKDDGGE-VFLHASALP-PGTTTLRPGQRVEFGIVEGRKGTQAL 60 Query: 66 NVVTL 70 V L Sbjct: 61 QVRLL 65 >UniRef50_A8PLB9 'Cold-shock' DNA-binding domain containing protein n=1 Tax=Brugia malayi RepID=A8PLB9_BRUMA Length = 205 Score = 92.4 bits (229), Expect = 4e-18, Method: Composition-based stats. Identities = 29/71 (40%), Positives = 40/71 (56%), Gaps = 8/71 (11%) Query: 7 GLVKWFNADKGFGFITPDDGSKDVFVH--------FTAIQSNEFRTLNENQKVEFSIEQG 58 G KWFN KG+GFITPD+G DVFVH + + + FR+L+ ++V F I + Sbjct: 11 GTCKWFNVLKGYGFITPDEGGDDVFVHQASGVFFIQSELNMDGFRSLDAGERVRFVIRRR 70 Query: 59 QRGPAAANVVT 69 G A VV+ Sbjct: 71 PEGNEATAVVS 81 >UniRef50_B9KKC8 Cold-shock DNA-binding protein family n=21 Tax=Rhodobacteraceae RepID=B9KKC8_RHOSK Length = 83 Score = 92.0 bits (228), Expect = 5e-18, Method: Composition-based stats. Identities = 32/65 (49%), Positives = 47/65 (72%) Query: 6 TGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPAAA 65 TG VKWFN+ KGFGFI PDDG KDVFVH +A++ + L++NQK+ + ++ G+ G ++A Sbjct: 18 TGTVKWFNSTKGFGFIAPDDGGKDVFVHISAVERAGLKGLSDNQKIGYELQSGRDGRSSA 77 Query: 66 NVVTL 70 + L Sbjct: 78 GDLRL 82 >UniRef50_Q1YTJ3 Cold shock protein n=1 Tax=gamma proteobacterium HTCC2207 RepID=Q1YTJ3_9GAMM Length = 89 Score = 92.0 bits (228), Expect = 5e-18, Method: Composition-based stats. Identities = 27/64 (42%), Positives = 41/64 (64%) Query: 6 TGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPAAA 65 TG VKWF+ D+GFGFI PD+G +++F H I ++TL Q+V + +E G+ G A Sbjct: 4 TGRVKWFSNDRGFGFIEPDNGERELFAHHQNIIMEGYKTLKCFQRVTYDVEHGKNGRHAV 63 Query: 66 NVVT 69 N++ Sbjct: 64 NIIP 67 >UniRef50_Q9Z3S6 Cold shock protein cspA n=72 Tax=Bacteria RepID=CSPA_RHIME Length = 69 Score = 92.0 bits (228), Expect = 5e-18, Method: Composition-based stats. Identities = 29/55 (52%), Positives = 39/55 (70%) Query: 6 TGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQR 60 +G VKWFN+ KGFGFI PDDG+ DVFVH +A++ R+L E QKV + I + + Sbjct: 3 SGTVKWFNSTKGFGFIQPDDGATDVFVHASAVERAGMRSLVEGQKVTYDIVRDTK 57 >UniRef50_D1AYL8 Cold-shock DNA-binding domain protein n=3 Tax=cellular organisms RepID=D1AYL8_STRM9 Length = 65 Score = 91.6 bits (227), Expect = 6e-18, Method: Composition-based stats. Identities = 37/65 (56%), Positives = 48/65 (73%), Gaps = 1/65 (1%) Query: 5 MTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPAA 64 M G VKWFN KGFGFI+ +DG KD F+HF+ I F+T+NE ++VEF IE G++GP A Sbjct: 1 MLGKVKWFNEKKGFGFISGEDG-KDYFLHFSKINKGGFKTVNEGEEVEFDIEDGEKGPQA 59 Query: 65 ANVVT 69 NVV+ Sbjct: 60 TNVVS 64 >UniRef50_P46449 Cold shock-like protein cspD n=53 Tax=Bacteria RepID=CSPD_HAEIN Length = 72 Score = 91.6 bits (227), Expect = 6e-18, Method: Composition-based stats. Identities = 24/64 (37%), Positives = 40/64 (62%) Query: 7 GLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPAAAN 66 G+VKWFN KGFGFI+ + D+F H++ I+ + +R+L QKV+F + +G A Sbjct: 4 GIVKWFNNAKGFGFISAEGVDADIFAHYSVIEMDGYRSLKAGQKVQFEVLHSDKGSHATK 63 Query: 67 VVTL 70 ++ + Sbjct: 64 IIPI 67 >UniRef50_A3YG84 Cold-shock protein CspD n=2 Tax=Marinomonas RepID=A3YG84_9GAMM Length = 92 Score = 91.6 bits (227), Expect = 7e-18, Method: Composition-based stats. Identities = 23/64 (35%), Positives = 39/64 (60%) Query: 6 TGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPAAA 65 G VKWFN KG+GFI + +D+F+H+++I + ++TL Q V F G++G A Sbjct: 3 HGTVKWFNNAKGYGFIVSESFEEDLFIHYSSILIDGYKTLKAGQSVSFKTSPGKQGLHAV 62 Query: 66 NVVT 69 +++ Sbjct: 63 DIMP 66 >UniRef50_B1Z823 Cold-shock DNA-binding domain protein n=34 Tax=Alphaproteobacteria RepID=B1Z823_METPB Length = 69 Score = 91.3 bits (226), Expect = 1e-17, Method: Composition-based stats. Identities = 31/61 (50%), Positives = 40/61 (65%), Gaps = 1/61 (1%) Query: 6 TGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQR-GPAA 64 TG VKWFN KG+GFI PD+G KDVFVH +A++ R L E QK+ + + +R G A Sbjct: 3 TGTVKWFNETKGYGFIQPDNGGKDVFVHISAVERAGLRNLVEGQKISYEVLTDKRSGKDA 62 Query: 65 A 65 A Sbjct: 63 A 63 >UniRef50_B6QZ94 Cold-shock DNA-binding domain protein n=1 Tax=Pseudovibrio sp. JE062 RepID=B6QZ94_9RHOB Length = 215 Score = 90.9 bits (225), Expect = 1e-17, Method: Composition-based stats. Identities = 29/67 (43%), Positives = 43/67 (64%), Gaps = 2/67 (2%) Query: 4 KMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQ--RG 61 + +G VK+F DKGFGFITPD+G DVFVH +A++ + TL+ Q++ F E + +G Sbjct: 121 RQSGTVKFFKLDKGFGFITPDEGENDVFVHISAVERSGLTTLDSGQRISFETEPDRRGKG 180 Query: 62 PAAANVV 68 P A + Sbjct: 181 PKAVELR 187 >UniRef50_Q5JKD6 Cold shock domain protein 2-like protein n=1 Tax=Oryza sativa Japonica Group RepID=Q5JKD6_ORYSJ Length = 221 Score = 90.9 bits (225), Expect = 1e-17, Method: Composition-based stats. Identities = 27/70 (38%), Positives = 47/70 (67%), Gaps = 1/70 (1%) Query: 1 MSNKMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQR 60 +S ++ G+VK F+A GF FITPDDGS+D+F+H ++++ + +R+LN++ +E S+ Sbjct: 2 VSERVKGMVKGFDATNGFSFITPDDGSEDLFIHQSSLKFDGYRSLNDDDVIELSVGSSDD 61 Query: 61 GP-AAANVVT 69 G A +V Sbjct: 62 GRTKAVDVTA 71 >UniRef50_Q4H2L8 Y-box protein 1/2/3 n=2 Tax=Ciona intestinalis RepID=Q4H2L8_CIOIN Length = 320 Score = 90.9 bits (225), Expect = 1e-17, Method: Composition-based stats. Identities = 30/73 (41%), Positives = 47/73 (64%), Gaps = 5/73 (6%) Query: 1 MSNKMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNE----FRTLNENQKVEFSIE 56 +++ +G+VKWFN G+GF+ DD +DVF+H TAI N R++ + + VEF + Sbjct: 22 LASHCSGVVKWFNVRNGYGFVNRDDNKEDVFIHQTAIIKNNPKKYLRSVGDGENVEFDVV 81 Query: 57 QGQRG-PAAANVV 68 +G++G P AANV Sbjct: 82 EGEKGLPEAANVT 94 >UniRef50_P91306 Y-box protein 2 n=6 Tax=Caenorhabditis RepID=P91306_CAEEL Length = 267 Score = 90.9 bits (225), Expect = 1e-17, Method: Composition-based stats. Identities = 29/73 (39%), Positives = 47/73 (64%), Gaps = 5/73 (6%) Query: 1 MSNKMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNE-----FRTLNENQKVEFSI 55 ++ + G VKW++ + +GFI+ +DG KD+FVH TAI + RTL ++++V F + Sbjct: 62 ITTGLQGKVKWYSVLRRYGFISRNDGEKDIFVHQTAIAKSATEKFYLRTLGDDEEVLFDL 121 Query: 56 EQGQRGPAAANVV 68 +G+ GP AANV Sbjct: 122 VEGKNGPEAANVT 134 >UniRef50_Q23960 Y-box protein n=1 Tax=Dugesia japonica RepID=Q23960_DUGJA Length = 266 Score = 90.9 bits (225), Expect = 1e-17, Method: Composition-based stats. Identities = 25/70 (35%), Positives = 44/70 (62%), Gaps = 4/70 (5%) Query: 5 MTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNE----FRTLNENQKVEFSIEQGQR 60 +TG VKWFN +G+GF+ +D +D+F+H +AI + +++ E +++ F I +G + Sbjct: 29 ITGKVKWFNVKRGYGFVCRNDNQEDIFIHQSAIVKSNPDHPRKSVGEGEEILFDIVKGAK 88 Query: 61 GPAAANVVTL 70 G AANV + Sbjct: 89 GNEAANVSAI 98 >UniRef50_A5VRP5 Cold-shock family protein n=37 Tax=Brucellaceae RepID=A5VRP5_BRUO2 Length = 83 Score = 90.5 bits (224), Expect = 1e-17, Method: Composition-based stats. Identities = 32/66 (48%), Positives = 44/66 (66%), Gaps = 2/66 (3%) Query: 6 TGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQ--RGPA 63 TG VK+FN +KGFGFI PDDG D+FVH +A+Q++ L +NQKV + E + +GP Sbjct: 16 TGQVKFFNTEKGFGFIKPDDGGADIFVHISAVQASGLPGLADNQKVSYETEPDRRGKGPK 75 Query: 64 AANVVT 69 A N+ Sbjct: 76 AVNITI 81 >UniRef50_A5V9E9 Cold-shock DNA-binding protein family n=2 Tax=cellular organisms RepID=A5V9E9_SPHWW Length = 198 Score = 90.5 bits (224), Expect = 2e-17, Method: Composition-based stats. Identities = 24/69 (34%), Positives = 38/69 (55%) Query: 2 SNKMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRG 61 + + G VKWF+A +GFGFI D DV VHF+ ++ + RTL E ++ + RG Sbjct: 31 AETVVGAVKWFDATRGFGFIATDGDRGDVLVHFSVLRDHGRRTLPEGARIACEVVARDRG 90 Query: 62 PAAANVVTL 70 A ++ + Sbjct: 91 LQARRILAI 99 Score = 67.0 bits (163), Expect = 2e-10, Method: Composition-based stats. Identities = 20/62 (32%), Positives = 37/62 (59%) Query: 8 LVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPAAANV 67 +VKWFN KG+GF+ D ++D+F+H ++ L +++ I +G++GP A + Sbjct: 136 IVKWFNRLKGYGFLVRDGETQDIFIHMETVRRAGLPDLLPETRMKARIAEGRKGPLAVEL 195 Query: 68 VT 69 +T Sbjct: 196 IT 197 >UniRef50_Q1NG42 Cold shock protein n=3 Tax=Alphaproteobacteria RepID=Q1NG42_9SPHN Length = 153 Score = 90.5 bits (224), Expect = 2e-17, Method: Composition-based stats. Identities = 29/63 (46%), Positives = 40/63 (63%) Query: 3 NKMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGP 62 + +G VK+FNA KGFGFI DDG D FVH +A++ LNE +++F +E +RG Sbjct: 83 ERASGTVKFFNAMKGFGFIQRDDGQPDAFVHISAVERAGMAALNEGDRLDFELEVDRRGK 142 Query: 63 AAA 65 AA Sbjct: 143 YAA 145 >UniRef50_A3VSH0 Cold shock protein n=1 Tax=Parvularcula bermudensis HTCC2503 RepID=A3VSH0_9PROT Length = 173 Score = 90.1 bits (223), Expect = 2e-17, Method: Composition-based stats. Identities = 22/69 (31%), Positives = 38/69 (55%) Query: 2 SNKMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRG 61 S ++ G VKWF+ KG+GFIT + G +DV +H + ++ + T E V + ++G Sbjct: 11 SREIRGFVKWFDQTKGYGFITDEAGGRDVLIHSSCLKQSGRATAPEGAIVTCEAIESEKG 70 Query: 62 PAAANVVTL 70 A ++ L Sbjct: 71 LQATRIINL 79 Score = 72.8 bits (178), Expect = 3e-12, Method: Composition-based stats. Identities = 20/62 (32%), Positives = 35/62 (56%) Query: 8 LVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPAAANV 67 VKWF+ KG+GF+T + ++D+FVH +++ L Q++ S +G +G AA + Sbjct: 108 TVKWFSRAKGYGFLTATNANEDIFVHMEVVRAAGLSELQPGQRLRASYGRGTKGLLAAAI 167 Query: 68 VT 69 Sbjct: 168 EP 169 >UniRef50_B8KR01 'Cold-shock' DNA-binding domain protein n=1 Tax=gamma proteobacterium NOR51-B RepID=B8KR01_9GAMM Length = 123 Score = 90.1 bits (223), Expect = 2e-17, Method: Composition-based stats. Identities = 30/65 (46%), Positives = 42/65 (64%), Gaps = 1/65 (1%) Query: 6 TGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPAAA 65 G +KWFNA KGFGFIT DDG++ VFVHF ++ R + Q+V + + + +RGP A Sbjct: 60 KGSIKWFNATKGFGFITGDDGNE-VFVHFRNVEQLSKREIKPGQRVAYRVTETERGPQAE 118 Query: 66 NVVTL 70 +V L Sbjct: 119 DVSPL 123 >UniRef50_Q6ZN17 Protein lin-28 homolog B n=13 Tax=Tetrapoda RepID=LN28B_HUMAN Length = 250 Score = 89.7 bits (222), Expect = 2e-17, Method: Composition-based stats. Identities = 27/72 (37%), Positives = 38/72 (52%), Gaps = 7/72 (9%) Query: 4 KMTGLVKWFNADKGFGFIT-------PDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIE 56 + TG KWFN GFGFI+ P D DVFVH + + FR+L E + VEF+ + Sbjct: 29 RGTGHCKWFNVRMGFGFISMINREGSPLDIPVDVFVHQSKLFMEGFRSLKEGEPVEFTFK 88 Query: 57 QGQRGPAAANVV 68 + +G + V Sbjct: 89 KSSKGLESIRVT 100 >UniRef50_C8WCQ1 Cold-shock DNA-binding domain protein n=18 Tax=Alphaproteobacteria RepID=C8WCQ1_ZYMMN Length = 303 Score = 89.7 bits (222), Expect = 2e-17, Method: Composition-based stats. Identities = 30/63 (47%), Positives = 40/63 (63%) Query: 3 NKMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGP 62 K +G VK+FNA KGFGFI DDG D FVH +A++ +LNE ++ F +E +RG Sbjct: 233 EKSSGTVKFFNAMKGFGFIQRDDGQPDAFVHISAVERAGLPSLNEGDRLSFELEVDRRGK 292 Query: 63 AAA 65 AA Sbjct: 293 YAA 295 Score = 79.3 bits (195), Expect = 4e-14, Method: Composition-based stats. Identities = 26/61 (42%), Positives = 38/61 (62%) Query: 6 TGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPAAA 65 TG+VK+FN+ KGFGF+ DDG +DVFVH +A++ L E Q + F++ +A Sbjct: 137 TGVVKFFNSQKGFGFVVRDDGGEDVFVHISAVEQAGLTGLAEGQPLSFTLVDRGGRVSAT 196 Query: 66 N 66 N Sbjct: 197 N 197 >UniRef50_D2QP83 Cold-shock DNA-binding domain protein n=5 Tax=Bacteroidetes RepID=D2QP83_9SPHI Length = 198 Score = 89.3 bits (221), Expect = 3e-17, Method: Composition-based stats. Identities = 31/65 (47%), Positives = 40/65 (61%), Gaps = 4/65 (6%) Query: 6 TGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPAAA 65 TG VK+FN KGFGFI D D+FVH +A+ ++EN KV FSIE G++G A Sbjct: 138 TGTVKFFNETKGFGFIKSDSSGDDIFVHVSAL----IDQIHENDKVRFSIEHGRKGLNAV 193 Query: 66 NVVTL 70 N+ L Sbjct: 194 NIKLL 198 >UniRef50_Q9EZJ7 Cold shock-like protein CspE (Fragment) n=1 Tax=Brucella abortus RepID=Q9EZJ7_BRUAB Length = 121 Score = 89.3 bits (221), Expect = 3e-17, Method: Composition-based stats. Identities = 24/70 (34%), Positives = 42/70 (60%), Gaps = 1/70 (1%) Query: 2 SNKMTGLVKWFNADKGFGFITPDD-GSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQR 60 S K++G +KWF+ KG+GFI PD G D+ +H T+++ + F+T E ++ + G R Sbjct: 23 SLKVSGHIKWFDVAKGYGFIVPDQPGLTDILLHVTSLRRDGFQTALEGARIVCEVRHGDR 82 Query: 61 GPAAANVVTL 70 G V+++ Sbjct: 83 GLQCFRVLSM 92 >UniRef50_Q2W0B3 Cold shock protein n=3 Tax=Magnetospirillum RepID=Q2W0B3_MAGSA Length = 200 Score = 89.3 bits (221), Expect = 4e-17, Method: Composition-based stats. Identities = 28/69 (40%), Positives = 43/69 (62%) Query: 2 SNKMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRG 61 + + G+VK+F+A+KGFGF+ D G KDVFVH A++ + +TL Q+V + G +G Sbjct: 132 TETVEGVVKFFSAEKGFGFVACDQGGKDVFVHVKALERSGIKTLESGQRVRVTTTLGLKG 191 Query: 62 PAAANVVTL 70 P A V + Sbjct: 192 PQADTVAII 200 Score = 78.5 bits (193), Expect = 5e-14, Method: Composition-based stats. Identities = 26/63 (41%), Positives = 36/63 (57%) Query: 5 MTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPAA 64 ++ VKWFNA KGFGF+ P DGS D F+H +A++ + E + + GQRGP Sbjct: 49 VSATVKWFNASKGFGFVAPSDGSPDAFLHISALERAGLTQVAEGATLVVDLGAGQRGPQV 108 Query: 65 ANV 67 V Sbjct: 109 VMV 111 >UniRef50_Q5YVF2 Putative cold shock protein n=1 Tax=Nocardia farcinica RepID=Q5YVF2_NOCFA Length = 122 Score = 89.3 bits (221), Expect = 4e-17, Method: Composition-based stats. Identities = 31/64 (48%), Positives = 39/64 (60%) Query: 6 TGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPAAA 65 G V WF+A+KGFGFITPDD S VFV F AI++ +RTL V + E+ + GP A Sbjct: 53 HGTVAWFDAEKGFGFITPDDRSPAVFVEFHAIEAVGYRTLVAGGPVVYRAEETKAGPEAV 112 Query: 66 NVVT 69 V Sbjct: 113 AVRP 116 >UniRef50_Q4SGH3 Chromosome undetermined SCAF14594, whole genome shotgun sequence. (Fragment) n=1 Tax=Tetraodon nigroviridis RepID=Q4SGH3_TETNG Length = 179 Score = 88.9 bits (220), Expect = 5e-17, Method: Composition-based stats. Identities = 27/69 (39%), Positives = 38/69 (55%), Gaps = 7/69 (10%) Query: 6 TGLVKWFNADKGFGFI-------TPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQG 58 +G+ KWFN GFGFI P D + DVFVH + + FR+L E + +EFS ++ Sbjct: 5 SGVCKWFNMRMGFGFISMSSRDGAPLDQNLDVFVHQSKLHMEGFRSLREGEALEFSFKKS 64 Query: 59 QRGPAAANV 67 +G A V Sbjct: 65 SKGLEAVRV 73 >UniRef50_UPI0000589074 PREDICTED: similar to ENSANGP00000011455 n=1 Tax=Strongylocentrotus purpuratus RepID=UPI0000589074 Length = 234 Score = 88.9 bits (220), Expect = 5e-17, Method: Composition-based stats. Identities = 27/62 (43%), Positives = 40/62 (64%) Query: 7 GLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPAAAN 66 G KWF+ K +GF+TPDDGS DVFVH I+ +R+L+ N++VE+ + ++G A Sbjct: 65 GKCKWFSLAKCYGFLTPDDGSGDVFVHQRVIKMVGYRSLDTNEEVEYKFQFSEKGREATT 124 Query: 67 VV 68 V Sbjct: 125 VT 126 >UniRef50_B9JZ17 Cold shock protein n=106 Tax=Alphaproteobacteria RepID=B9JZ17_AGRVS Length = 71 Score = 88.6 bits (219), Expect = 5e-17, Method: Composition-based stats. Identities = 34/63 (53%), Positives = 45/63 (71%), Gaps = 2/63 (3%) Query: 6 TGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQ--RGPA 63 TG+VK+FN DKGFGFI PD+G D+FVH +A+Q++ L+ENQKV F E + +GP Sbjct: 4 TGIVKFFNNDKGFGFIKPDNGGADIFVHISAVQASGLNGLSENQKVSFDTEPDRRGKGPK 63 Query: 64 AAN 66 A N Sbjct: 64 AVN 66 >UniRef50_Q2S3Y3 'Cold-shock' DNA-binding domain, putative n=1 Tax=Salinibacter ruber DSM 13855 RepID=Q2S3Y3_SALRD Length = 69 Score = 88.6 bits (219), Expect = 5e-17, Method: Composition-based stats. Identities = 26/65 (40%), Positives = 40/65 (61%), Gaps = 3/65 (4%) Query: 6 TGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPAAA 65 TG VKWF+ +G+GF+ PD+G DVF+H + + L E ++EF IE+ ++G A Sbjct: 3 TGTVKWFSPAEGYGFVEPDNGEDDVFLHHSEVPDE---DLEEGDRLEFEIEETEKGLNAV 59 Query: 66 NVVTL 70 N+ L Sbjct: 60 NIEAL 64 >UniRef50_D1BKC9 Cold shock domain protein CspD n=31 Tax=Bacteria RepID=D1BKC9_SANKS Length = 317 Score = 88.6 bits (219), Expect = 5e-17, Method: Composition-based stats. Identities = 30/64 (46%), Positives = 42/64 (65%), Gaps = 2/64 (3%) Query: 6 TGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQS--NEFRTLNENQKVEFSIEQGQRGPA 63 G V+WF+A++GFGF+ DDG+ D+FVH + I + ++L E Q VEF I +G RGP Sbjct: 3 QGTVRWFDAERGFGFLALDDGADDLFVHASEIVGNDDGTQSLREGQSVEFEIGEGDRGPQ 62 Query: 64 AANV 67 A V Sbjct: 63 ARRV 66 Score = 79.7 bits (196), Expect = 2e-14, Method: Composition-based stats. Identities = 27/63 (42%), Positives = 36/63 (57%), Gaps = 1/63 (1%) Query: 8 LVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPAAANV 67 V W++A KGFGF+TPD G D FVH ++ L E +V FS+ G RGP A +V Sbjct: 164 TVSWYDAGKGFGFVTPDSGEPDAFVHARSLAG-GATELVEGDRVSFSVVPGDRGPQAQDV 222 Query: 68 VTL 70 + Sbjct: 223 RVV 225 Score = 78.5 bits (193), Expect = 5e-14, Method: Composition-based stats. Identities = 26/61 (42%), Positives = 38/61 (62%), Gaps = 2/61 (3%) Query: 7 GLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPAAAN 66 G+V ++A++GFGFITPD G D+FVH + ++ + L E +V F + Q RGP A Sbjct: 256 GVVARYDAERGFGFITPDSGGPDLFVHVSVVREG--QELYEGDRVRFQVRQSDRGPQADR 313 Query: 67 V 67 V Sbjct: 314 V 314 Score = 77.8 bits (191), Expect = 1e-13, Method: Composition-based stats. Identities = 23/58 (39%), Positives = 35/58 (60%), Gaps = 2/58 (3%) Query: 7 GLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPAA 64 G V W+ KG+GF+TPD G ++F H +AI + E Q+V F + +G++GP A Sbjct: 82 GTVTWYEPTKGYGFVTPDGGGAEIFAHSSAIVGGGV--IAEGQRVAFLVVEGEKGPQA 137 >UniRef50_A4TN10 Cold-shock DNA-binding protein family n=35 Tax=Enterobacteriaceae RepID=A4TN10_YERPP Length = 69 Score = 88.6 bits (219), Expect = 6e-17, Method: Composition-based stats. Identities = 35/70 (50%), Positives = 49/70 (70%), Gaps = 1/70 (1%) Query: 1 MSNKMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQR 60 M+ KM G VKWFN +G+GFI+P DG DV+V+ TAI + + ++LNE Q VEFS + Sbjct: 1 MTLKM-GRVKWFNQSEGYGFISPHDGGSDVYVNKTAIANTKNKSLNEGQDVEFSTYRSIH 59 Query: 61 GPAAANVVTL 70 GP+AA+V+ Sbjct: 60 GPSAADVIAF 69 >UniRef50_B1MZK9 Cold shock protein n=15 Tax=Bacteria RepID=B1MZK9_LEUCK Length = 74 Score = 88.2 bits (218), Expect = 8e-17, Method: Composition-based stats. Identities = 28/65 (43%), Positives = 42/65 (64%) Query: 6 TGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPAAA 65 TG+VK + ++G+G+ITPD G +DVFVHF I F+ L + +KV + + QG + P AA Sbjct: 3 TGIVKIWQKERGYGYITPDAGGEDVFVHFNGIDMPGFKALKQGEKVSYVLVQGYKAPQAA 62 Query: 66 NVVTL 70 V + Sbjct: 63 QVQPI 67 >UniRef50_P92186 Protein lin-28 n=5 Tax=Caenorhabditis RepID=LIN28_CAEEL Length = 227 Score = 87.8 bits (217), Expect = 9e-17, Method: Composition-based stats. Identities = 23/68 (33%), Positives = 39/68 (57%), Gaps = 2/68 (2%) Query: 2 SNKMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQ-- 59 + + G KWFN KG+GF+ D +D+FVH + + FR+L+E ++V + I++ Sbjct: 50 TPRYFGSCKWFNVSKGYGFVIDDITGEDLFVHQSNLNMQGFRSLDEGERVSYYIQERSNG 109 Query: 60 RGPAAANV 67 +G A V Sbjct: 110 KGREAYAV 117 >UniRef50_B6IXJ6 Cold shock-like protein CspA n=1 Tax=Rhodospirillum centenum SW RepID=B6IXJ6_RHOCS Length = 199 Score = 87.4 bits (216), Expect = 1e-16, Method: Composition-based stats. Identities = 26/67 (38%), Positives = 39/67 (58%) Query: 4 KMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPA 63 ++ G VKWF DKGFGF+T DDG KDVFVH + ++ +L ++V + + +G Sbjct: 132 ELEGSVKWFKDDKGFGFVTTDDGGKDVFVHKSILRRAGLESLQSGERVLMRVTEAPKGRE 191 Query: 64 AANVVTL 70 A + L Sbjct: 192 ATWIQLL 198 Score = 77.4 bits (190), Expect = 1e-13, Method: Composition-based stats. Identities = 24/63 (38%), Positives = 33/63 (52%) Query: 8 LVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPAAANV 67 VKWFN KGFGF+ P DG+ D F+H + + L E +V I G +GP + Sbjct: 46 TVKWFNGVKGFGFVAPADGTPDAFLHASVLSRVGLSDLAEGAEVMVVIGPGPKGPQVIRL 105 Query: 68 VTL 70 V + Sbjct: 106 VDV 108 >UniRef50_D2H5S2 Putative uncharacterized protein (Fragment) n=2 Tax=Caniformia RepID=D2H5S2_AILME Length = 276 Score = 87.0 bits (215), Expect = 1e-16, Method: Composition-based stats. Identities = 27/70 (38%), Positives = 37/70 (52%), Gaps = 7/70 (10%) Query: 6 TGLVKWFNADKGFGFIT-------PDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQG 58 TG KWFN GFGFI+ P D DVFVH + + FR+L E + VEF+ ++ Sbjct: 57 TGHCKWFNVRMGFGFISMINREGSPLDIPVDVFVHQSKLFMEGFRSLKEGEPVEFTFKKS 116 Query: 59 QRGPAAANVV 68 +G + V Sbjct: 117 SKGLESIRVT 126 >UniRef50_A3YF52 Cold-shock protein, DNA-binding n=2 Tax=Marinomonas RepID=A3YF52_9GAMM Length = 79 Score = 86.6 bits (214), Expect = 2e-16, Method: Composition-based stats. Identities = 30/67 (44%), Positives = 40/67 (59%), Gaps = 1/67 (1%) Query: 1 MSNKMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQR 60 M++K+ G VKWFN KG GFI D+ DVFVH+ +I S +TL + Q V F I + Sbjct: 1 MTDKLKGTVKWFNDSKGVGFIQRDN-EADVFVHYKSIVSEGHKTLKKGQAVSFFITENDF 59 Query: 61 GPAAANV 67 G A+ V Sbjct: 60 GRQASEV 66 >UniRef50_B0T8T3 Cold-shock DNA-binding domain protein n=40 Tax=Bacteria RepID=B0T8T3_CAUSK Length = 179 Score = 86.6 bits (214), Expect = 2e-16, Method: Composition-based stats. Identities = 28/53 (52%), Positives = 39/53 (73%) Query: 8 LVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQR 60 +VKWFN+ KGFGFI PD+G D+FVH +A++ R LNE Q+V + +EQ +R Sbjct: 115 VVKWFNSTKGFGFIQPDNGGGDIFVHISAVERAGLRGLNEGQQVGYELEQDRR 167 Score = 86.3 bits (213), Expect = 3e-16, Method: Composition-based stats. Identities = 27/54 (50%), Positives = 38/54 (70%) Query: 7 GLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQR 60 G+VKWFN KGFGFI P+DG +DVFVH A++ + LNE +V + +E+ +R Sbjct: 4 GVVKWFNPAKGFGFIQPEDGGQDVFVHIAAVERSGLSGLNEGDQVTYEMEEDRR 57 >UniRef50_B3QHW3 Cold-shock DNA-binding domain protein n=92 Tax=Alphaproteobacteria RepID=B3QHW3_RHOPT Length = 235 Score = 86.6 bits (214), Expect = 2e-16, Method: Composition-based stats. Identities = 22/67 (32%), Positives = 43/67 (64%) Query: 4 KMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPA 63 +++G++KWF+A KG+GF+ PD+G DV +H T ++ + ++T E ++ Q +G Sbjct: 68 EISGVIKWFDASKGYGFVVPDNGWPDVLLHVTVLRRDGYQTAYEGARIVVECVQRAKGYQ 127 Query: 64 AANVVTL 70 A +V++ Sbjct: 128 AFRIVSM 134 Score = 70.8 bits (173), Expect = 1e-11, Method: Composition-based stats. Identities = 22/61 (36%), Positives = 31/61 (50%) Query: 9 VKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPAAANVV 68 VKWFN +GFGF+T +G+ D+FVH ++ L Q V G +G AA + Sbjct: 165 VKWFNRLRGFGFLTCGEGTPDIFVHMETLRRYGMTELRPGQYVLVRFGPGSKGMMAAEIQ 224 Query: 69 T 69 Sbjct: 225 P 225 >UniRef50_A4V6J7 Y-Box factor protein (Fragment) n=1 Tax=Dugesia japonica RepID=A4V6J7_DUGJA Length = 178 Score = 86.3 bits (213), Expect = 3e-16, Method: Composition-based stats. Identities = 29/65 (44%), Positives = 41/65 (63%), Gaps = 3/65 (4%) Query: 7 GLVKWFNADKGFGFITPDDGSKDVFVHFTAI---QSNEFRTLNENQKVEFSIEQGQRGPA 63 G VKW+N KG+GFI DD +DVFVH +AI Q + ++L E++ V F + +G +G Sbjct: 5 GKVKWYNVKKGYGFIHRDDVDEDVFVHQSAISRCQPGKQKSLGEDEDVLFDVVKGSKGNE 64 Query: 64 AANVV 68 A NV Sbjct: 65 AMNVT 69 >UniRef50_A0Z255 Cold shock protein, CspA family-like protein n=1 Tax=marine gamma proteobacterium HTCC2080 RepID=A0Z255_9GAMM Length = 138 Score = 85.9 bits (212), Expect = 4e-16, Method: Composition-based stats. Identities = 28/64 (43%), Positives = 41/64 (64%), Gaps = 1/64 (1%) Query: 7 GLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPAAAN 66 G +KWFNA KGFGFI DDG++ VFVH+ ++ R++ + Q+V +S+ RGP A Sbjct: 76 GNIKWFNATKGFGFIVGDDGAE-VFVHYRNVEGLTKRSIKQGQRVAYSVRASDRGPQAEG 134 Query: 67 VVTL 70 V + Sbjct: 135 VKAV 138 >UniRef50_B4SFC0 Cold-shock DNA-binding domain protein n=1 Tax=Pelodictyon phaeoclathratiforme BU-1 RepID=B4SFC0_PELPB Length = 74 Score = 85.5 bits (211), Expect = 4e-16, Method: Composition-based stats. Identities = 31/65 (47%), Positives = 40/65 (61%) Query: 6 TGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPAAA 65 TG VKWFN KGFGFI PD+G DVFVH ++ + TLNE KV++ + + AA Sbjct: 9 TGTVKWFNKMKGFGFIIPDNGGADVFVHINELEKSGLATLNEADKVKYDMVEKNGKVAAG 68 Query: 66 NVVTL 70 N+ L Sbjct: 69 NIQLL 73 >UniRef50_Q4UBG6 Cold shock protein, putative n=2 Tax=Theileria RepID=Q4UBG6_THEAN Length = 95 Score = 85.5 bits (211), Expect = 4e-16, Method: Composition-based stats. Identities = 28/66 (42%), Positives = 43/66 (65%), Gaps = 1/66 (1%) Query: 3 NKMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGP 62 ++ G+ KWFN KG+GFIT ++G +DVFVH + I ++ FR+L+EN+KVE + Sbjct: 2 TRLNGVCKWFNNKKGYGFITLENG-EDVFVHQSEIYADGFRSLHENEKVELEVIMDNNRK 60 Query: 63 AAANVV 68 A +V Sbjct: 61 KAIHVT 66 >UniRef50_C1E859 Cold-shock protein with RNA binding domain n=2 Tax=Micromonas RepID=C1E859_9CHLO Length = 305 Score = 85.1 bits (210), Expect = 5e-16, Method: Composition-based stats. Identities = 31/66 (46%), Positives = 39/66 (59%), Gaps = 1/66 (1%) Query: 4 KMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGP- 62 K G+V WFN KGFGF+T DDG DVFVH + I + FR+L + + VEF +E G Sbjct: 43 KYKGVVNWFNVAKGFGFVTRDDGVGDVFVHQSDIYAEGFRSLRDQEPVEFELEPMGDGRY 102 Query: 63 AAANVV 68 A V Sbjct: 103 KAVKVT 108 >UniRef50_C8SGB1 Cold-shock DNA-binding domain protein n=4 Tax=Mesorhizobium RepID=C8SGB1_9RHIZ Length = 199 Score = 85.1 bits (210), Expect = 6e-16, Method: Composition-based stats. Identities = 26/64 (40%), Positives = 36/64 (56%) Query: 7 GLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPAAAN 66 G VKW++ KGFGFI P+ G KD FVH TA+ + L E Q V QG++G + Sbjct: 136 GTVKWYDPQKGFGFIAPNKGEKDAFVHATALTRSGISELLEGQMVLVECGQGKKGLEVLS 195 Query: 67 VVTL 70 + + Sbjct: 196 IRLV 199 Score = 52.7 bits (126), Expect = 4e-06, Method: Composition-based stats. Identities = 19/62 (30%), Positives = 35/62 (56%), Gaps = 1/62 (1%) Query: 9 VKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPAAANVV 68 V WFNA KGFGF+ DG++ ++ ++++ R + E +++ +IE+ RG V Sbjct: 47 VMWFNAGKGFGFVKLLDGTE-AYLPVRVLEASGTRDVCEGTRLKVTIEERPRGHQVTKVR 105 Query: 69 TL 70 + Sbjct: 106 EI 107 >UniRef50_A0PKZ5 Cold shock-like protein B CspB n=78 Tax=Actinomycetales RepID=A0PKZ5_MYCUA Length = 184 Score = 85.1 bits (210), Expect = 6e-16, Method: Composition-based stats. Identities = 28/65 (43%), Positives = 44/65 (67%), Gaps = 2/65 (3%) Query: 6 TGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPAAA 65 TG VKW+++DKGFGF++ ++G +DV+V +A+ + L Q+VEF I G+RGP A Sbjct: 53 TGKVKWYDSDKGFGFLSQEEG-EDVYVRSSALPA-GVEGLKAGQRVEFGIASGRRGPQAL 110 Query: 66 NVVTL 70 ++ L Sbjct: 111 SLKLL 115 >UniRef50_B3DPK3 Cold shock protein n=7 Tax=Bifidobacterium RepID=B3DPK3_BIFLD Length = 79 Score = 85.1 bits (210), Expect = 7e-16, Method: Composition-based stats. Identities = 31/69 (44%), Positives = 42/69 (60%), Gaps = 4/69 (5%) Query: 6 TGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNE----FRTLNENQKVEFSIEQGQRG 61 G VK+F A KGFGFI PDDG +DVFVH+ I+ + F+ L E +VE++ +G Sbjct: 3 QGTVKFFLAKKGFGFIQPDDGGEDVFVHYAEIKDDGSTNKFKMLYEGDRVEYTPASSGKG 62 Query: 62 PAAANVVTL 70 A +VV L Sbjct: 63 TQAKDVVKL 71 >UniRef50_A8NIV0 'Cold-shock' DNA-binding domain containing protein n=1 Tax=Brugia malayi RepID=A8NIV0_BRUMA Length = 244 Score = 84.7 bits (209), Expect = 8e-16, Method: Composition-based stats. Identities = 31/70 (44%), Positives = 41/70 (58%), Gaps = 6/70 (8%) Query: 5 MTGLVKWFNADKGFGFITPDDG-SKDVFVHFTAIQSNE-----FRTLNENQKVEFSIEQG 58 + G VKW++ +GFI DD DVFVH TAI + RTL + ++V F I QG Sbjct: 6 VKGKVKWYSVRYHYGFIARDDNKGNDVFVHQTAIAKSRIIKYYLRTLGDGEEVLFDIVQG 65 Query: 59 QRGPAAANVV 68 ++GP AANV Sbjct: 66 KQGPEAANVT 75 >UniRef50_Q803L0 Protein lin-28 homolog A n=13 Tax=Euteleostomi RepID=LN28A_DANRE Length = 202 Score = 84.7 bits (209), Expect = 8e-16, Method: Composition-based stats. Identities = 24/70 (34%), Positives = 37/70 (52%), Gaps = 7/70 (10%) Query: 6 TGLVKWFNADKGFGFITPD-------DGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQG 58 +G+ KWFN GFGF++ D DVFVH + + FR+L E + VEF+ ++ Sbjct: 35 SGVCKWFNVRMGFGFLSMTHREGICLDSPVDVFVHQSKLHMEGFRSLKEGEAVEFTFKRS 94 Query: 59 QRGPAAANVV 68 +G + V Sbjct: 95 SKGLESLQVT 104 >UniRef50_Q2NK56 Cold shock protein n=6 Tax=Bacteria RepID=Q2NK56_AYWBP Length = 74 Score = 84.3 bits (208), Expect = 1e-15, Method: Composition-based stats. Identities = 34/70 (48%), Positives = 49/70 (70%), Gaps = 3/70 (4%) Query: 3 NKMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSN--EFRTLNENQKVEFSIEQGQR 60 K G +WF+ DKG+GFI DG KD+FVH+++IQ+ +TLNEN KVEF++++G R Sbjct: 4 KKEQGTCRWFSKDKGYGFIISADG-KDIFVHYSSIQTEVFGRKTLNENDKVEFTVKEGDR 62 Query: 61 GPAAANVVTL 70 G A +VV + Sbjct: 63 GAQAVDVVVV 72 >UniRef50_Q1RHK6 Cold shock-like protein cspA n=15 Tax=Rickettsia RepID=CSPA_RICBR Length = 70 Score = 84.3 bits (208), Expect = 1e-15, Method: Composition-based stats. Identities = 29/69 (42%), Positives = 39/69 (56%) Query: 1 MSNKMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQR 60 M+ + G VKWFN K FGFI ++G KDVFVH +A+ + LNE Q V F +E Sbjct: 1 MTTNIVGKVKWFNPTKNFGFIEQENGGKDVFVHRSAVDAAGLAGLNEGQDVIFDLEDKNG 60 Query: 61 GPAAANVVT 69 +A N+ Sbjct: 61 KISAVNLRI 69 >UniRef50_B6KPP5 Glycine-rich protein 2, putative n=3 Tax=Toxoplasma gondii RepID=B6KPP5_TOXGO Length = 209 Score = 84.3 bits (208), Expect = 1e-15, Method: Composition-based stats. Identities = 30/63 (47%), Positives = 41/63 (65%), Gaps = 2/63 (3%) Query: 7 GLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRG-PAAA 65 G KWF++ KGFGFIT +DG+ D+FVH T I++ FR L E + VEF ++ G G A Sbjct: 90 GHCKWFDSKKGFGFITAEDGT-DLFVHQTEIKAQGFRNLAEGESVEFRVQVGHDGKRKAV 148 Query: 66 NVV 68 +V Sbjct: 149 SVT 151 >UniRef50_A0R441 'Cold-shock' DNA-binding domain protein n=18 Tax=Actinomycetales RepID=A0R441_MYCS2 Length = 149 Score = 83.9 bits (207), Expect = 1e-15, Method: Composition-based stats. Identities = 27/65 (41%), Positives = 44/65 (67%), Gaps = 2/65 (3%) Query: 6 TGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPAAA 65 TG VKW++A+KGFGF++ +DG +DV+V +A+ + L Q+VEF + G+RGP A Sbjct: 16 TGKVKWYDAEKGFGFLSQEDG-EDVYVRSSALPA-GVEALKSGQRVEFGVAAGRRGPQAL 73 Query: 66 NVVTL 70 ++ + Sbjct: 74 SLKLI 78 >UniRef50_Q1AWL7 Cold-shock DNA-binding protein family n=2 Tax=cellular organisms RepID=Q1AWL7_RUBXD Length = 197 Score = 83.6 bits (206), Expect = 2e-15, Method: Composition-based stats. Identities = 24/69 (34%), Positives = 42/69 (60%), Gaps = 2/69 (2%) Query: 2 SNKMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRG 61 S + G VKWF+ +KG+GF+ G +D+FVH + ++ + +L + +VE+ + + +RG Sbjct: 131 SQREQGRVKWFDPEKGYGFLVRP-GGEDLFVHHSEVEGD-ASSLGQGVEVEYEVGRNERG 188 Query: 62 PAAANVVTL 70 P A V L Sbjct: 189 PNARRVRVL 197 >UniRef50_Q016S2 Putative nucleic acid binding protein (ISS) n=1 Tax=Ostreococcus tauri RepID=Q016S2_OSTTA Length = 125 Score = 83.6 bits (206), Expect = 2e-15, Method: Composition-based stats. Identities = 29/62 (46%), Positives = 36/62 (58%), Gaps = 6/62 (9%) Query: 2 SNKMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRT------LNENQKVEFSI 55 S + G VKWFN KGFG+ITPDDG DVFVH +A++ FR + VEF + Sbjct: 8 SARRRGKVKWFNCTKGFGYITPDDGEPDVFVHQSALKMEGFRRTDGRRFATQGDSVEFDV 67 Query: 56 EQ 57 E Sbjct: 68 EH 69 >UniRef50_A4FKV9 Putative DNA-binding protein n=1 Tax=Saccharopolyspora erythraea NRRL 2338 RepID=A4FKV9_SACEN Length = 150 Score = 83.6 bits (206), Expect = 2e-15, Method: Composition-based stats. Identities = 25/65 (38%), Positives = 33/65 (50%) Query: 6 TGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPAAA 65 TG V F+ KG+GFI PD G +DVF+H + + L +VEF G +G A Sbjct: 3 TGTVVRFDGIKGYGFIAPDAGGEDVFLHASILDEELKEVLRGGMRVEFEAVPGNQGTKAM 62 Query: 66 NVVTL 70 V L Sbjct: 63 TVNLL 67 >UniRef50_Q9H9Z2 Protein lin-28 homolog A n=33 Tax=Euteleostomi RepID=LN28A_HUMAN Length = 209 Score = 83.6 bits (206), Expect = 2e-15, Method: Composition-based stats. Identities = 24/69 (34%), Positives = 36/69 (52%), Gaps = 7/69 (10%) Query: 7 GLVKWFNADKGFGFITPD-------DGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQ 59 G+ KWFN GFGF++ D DVFVH + + FR+L E + VEF+ ++ Sbjct: 42 GICKWFNVRMGFGFLSMTARAGVALDPPVDVFVHQSKLHMEGFRSLKEGEAVEFTFKKSA 101 Query: 60 RGPAAANVV 68 +G + V Sbjct: 102 KGLESIRVT 110 >UniRef50_B4RAZ9 Cold-shock DNA-binding domain protein n=6 Tax=Caulobacteraceae RepID=B4RAZ9_PHEZH Length = 202 Score = 83.2 bits (205), Expect = 3e-15, Method: Composition-based stats. Identities = 27/71 (38%), Positives = 41/71 (57%), Gaps = 4/71 (5%) Query: 4 KMTGLVKWFNADKGFGFITPDDGS----KDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQ 59 ++TG VKWF+A KG+GFI PDD + KDV +H T+++S+ E + + + Sbjct: 26 RITGRVKWFDAGKGYGFIVPDDPAQTDLKDVLLHVTSLRSSGREHCLEGSLITCDVVRRP 85 Query: 60 RGPAAANVVTL 70 +G A VV L Sbjct: 86 KGWQVAEVVDL 96 Score = 74.3 bits (182), Expect = 1e-12, Method: Composition-based stats. Identities = 19/62 (30%), Positives = 29/62 (46%) Query: 8 LVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPAAANV 67 VKWFN KG+GF+ D D+FVH ++ + L + V +G +G A + Sbjct: 137 KVKWFNRAKGYGFVIRDSQPGDIFVHIETLRRSGMEDLQPGENVMVRFAEGPKGLVVAEI 196 Query: 68 VT 69 Sbjct: 197 EA 198 >UniRef50_C0CRT9 Putative uncharacterized protein n=1 Tax=Blautia hydrogenotrophica DSM 10507 RepID=C0CRT9_9FIRM Length = 77 Score = 82.8 bits (204), Expect = 3e-15, Method: Composition-based stats. Identities = 24/68 (35%), Positives = 40/68 (58%), Gaps = 1/68 (1%) Query: 2 SNKMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRG 61 + G VKWF+ KG+GFI D+G K+ FVH + I FR L ++V + ++ ++G Sbjct: 10 ATVEHGTVKWFDPVKGYGFIAGDNG-KETFVHQSDILMRGFRHLETGERVSYRVKATEKG 68 Query: 62 PAAANVVT 69 A +V++ Sbjct: 69 DKAIDVIS 76 >UniRef50_Q1GT29 Cold-shock DNA-binding protein family n=1 Tax=Sphingopyxis alaskensis RepID=Q1GT29_SPHAL Length = 90 Score = 82.8 bits (204), Expect = 3e-15, Method: Composition-based stats. Identities = 31/61 (50%), Positives = 42/61 (68%), Gaps = 1/61 (1%) Query: 7 GLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGP-AAA 65 G VK+FN DKG+GFI +DGS D FVH TA+Q+ TLN+ Q+V + +E G+ G +A Sbjct: 26 GTVKFFNNDKGYGFIENEDGSGDSFVHITAVQAAGMDTLNKEQRVSYELETGKNGKVSAI 85 Query: 66 N 66 N Sbjct: 86 N 86 >UniRef50_C2E292 Cold-shock protein n=9 Tax=Lactobacillus RepID=C2E292_9LACO Length = 73 Score = 82.4 bits (203), Expect = 4e-15, Method: Composition-based stats. Identities = 24/62 (38%), Positives = 36/62 (58%) Query: 6 TGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPAAA 65 TG VK F++ GFGFI D FV +TAI+ +++L Q+V + + QG++G Sbjct: 3 TGTVKQFDSAAGFGFIDDDLTKASYFVFYTAIKEAGYKSLEIGQRVRYQLAQGKKGLQCI 62 Query: 66 NV 67 NV Sbjct: 63 NV 64 >UniRef50_B9T6D3 Cellular nucleic acid binding protein, putative n=1 Tax=Ricinus communis RepID=B9T6D3_RICCO Length = 266 Score = 82.4 bits (203), Expect = 4e-15, Method: Composition-based stats. Identities = 28/68 (41%), Positives = 41/68 (60%), Gaps = 2/68 (2%) Query: 4 KMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNE-FRTLNENQKVEFSIE-QGQRG 61 + G V F+ KGFGFI PDDG +D+FVH +AI+S+ +R+L E+ VEF++ Sbjct: 13 RSRGKVVRFSDRKGFGFIKPDDGGEDLFVHHSAIKSDGRYRSLAEDDVVEFTVSLSDDNK 72 Query: 62 PAAANVVT 69 A +V Sbjct: 73 YQAVDVTA 80 >UniRef50_Q0VN88 Cold-shock domain family protein n=2 Tax=Alcanivorax RepID=Q0VN88_ALCBS Length = 76 Score = 82.4 bits (203), Expect = 4e-15, Method: Composition-based stats. Identities = 30/61 (49%), Positives = 37/61 (60%), Gaps = 1/61 (1%) Query: 7 GLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPAAAN 66 G VKWFN +KGFGFI D G +++FVHF A+Q+ R+L KV F RG A N Sbjct: 13 GEVKWFNPNKGFGFILTDSG-EELFVHFKAVQNGGRRSLRTGTKVRFDTRMSDRGEQADN 71 Query: 67 V 67 V Sbjct: 72 V 72 >UniRef50_A7BYF1 Putative uncharacterized protein n=1 Tax=Beggiatoa sp. PS RepID=A7BYF1_9GAMM Length = 189 Score = 82.4 bits (203), Expect = 4e-15, Method: Composition-based stats. Identities = 29/65 (44%), Positives = 40/65 (61%), Gaps = 2/65 (3%) Query: 5 MTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPAA 64 M G+V F+ +GFGFI D S+DVFVH I+ ++L+ QKVEF EQ +G +A Sbjct: 1 MEGIVVKFDKKRGFGFIRSDKFSEDVFVHLKNIREQ--QSLSPGQKVEFDTEQTDKGLSA 58 Query: 65 ANVVT 69 NV+ Sbjct: 59 INVIP 63 >UniRef50_B9MXF4 Predicted protein n=2 Tax=Populus trichocarpa RepID=B9MXF4_POPTR Length = 235 Score = 82.0 bits (202), Expect = 5e-15, Method: Composition-based stats. Identities = 31/68 (45%), Positives = 41/68 (60%), Gaps = 1/68 (1%) Query: 3 NKMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSN-EFRTLNENQKVEFSIEQGQRG 61 + TG V F+ KGFGFI PD G KD+FVH +AI+S+ +RTL E+ VEF+I Sbjct: 12 ERSTGRVVRFSDKKGFGFIKPDAGDKDLFVHHSAIKSDGGYRTLYEDDVVEFTILLNDDK 71 Query: 62 PAAANVVT 69 A +V Sbjct: 72 YQAVDVTA 79 >UniRef50_D1U4V2 Cold-shock DNA-binding domain protein n=1 Tax=Desulfovibrio aespoeensis Aspo-2 RepID=D1U4V2_9DELT Length = 76 Score = 82.0 bits (202), Expect = 6e-15, Method: Composition-based stats. Identities = 28/64 (43%), Positives = 40/64 (62%), Gaps = 1/64 (1%) Query: 4 KMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPA 63 + G V WFN KGFGFIT DDG DVFVH+T I + F++L ++V +++ + P Sbjct: 2 RREGKVTWFNDKKGFGFITGDDG-LDVFVHYTEIVRDGFQSLEPGERVSYAVTDEEIAPK 60 Query: 64 AANV 67 A +V Sbjct: 61 AVDV 64 >UniRef50_A0ACJ4 Putative DNA-binding protein n=2 Tax=Streptomyces RepID=A0ACJ4_STRAM Length = 172 Score = 81.6 bits (201), Expect = 7e-15, Method: Composition-based stats. Identities = 25/63 (39%), Positives = 38/63 (60%), Gaps = 1/63 (1%) Query: 7 GLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPAAAN 66 G + F+ +G+GFI PD+G +DVF+H + ++ R L KVEF +E+G RG A+ Sbjct: 9 GKIIRFDEFRGYGFIAPDNGGEDVFIHVNDLAFDK-RLLGPGMKVEFDVEEGDRGLKASR 67 Query: 67 VVT 69 V Sbjct: 68 VRI 70 >UniRef50_B2IBA0 Cold-shock DNA-binding domain protein n=2 Tax=Rhizobiales RepID=B2IBA0_BEII9 Length = 205 Score = 81.6 bits (201), Expect = 7e-15, Method: Composition-based stats. Identities = 23/63 (36%), Positives = 36/63 (57%) Query: 8 LVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPAAANV 67 VKWFN KGFGF++ DG++D+FVH ++ + L+ +++ QG +G A V Sbjct: 135 KVKWFNRVKGFGFLSRGDGTEDIFVHMEILRRHGISILHPGEELRARFGQGPKGLIAIEV 194 Query: 68 VTL 70 L Sbjct: 195 RPL 197 Score = 81.2 bits (200), Expect = 9e-15, Method: Composition-based stats. Identities = 21/67 (31%), Positives = 38/67 (56%) Query: 4 KMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPA 63 +++G +KWF+ KG+GF+ D+G DV +H TA++ + E +V +G +G Sbjct: 32 EISGRIKWFDLVKGYGFVVADNGLGDVLLHVTALRKDGHSKACEGARVVCEAMRGTKGWQ 91 Query: 64 AANVVTL 70 V++L Sbjct: 92 VFRVISL 98 >UniRef50_C0Z2E8 AT4G38680 protein n=103 Tax=cellular organisms RepID=C0Z2E8_ARATH Length = 204 Score = 81.6 bits (201), Expect = 8e-15, Method: Composition-based stats. Identities = 25/43 (58%), Positives = 32/43 (74%) Query: 3 NKMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTL 45 + G VKWF+ KGFGFITPDDG D+FVH ++I+S FR+L Sbjct: 9 ERRKGSVKWFDTQKGFGFITPDDGGDDLFVHQSSIRSEGFRSL 51 >UniRef50_A9AXX4 Cold-shock DNA-binding domain protein n=1 Tax=Herpetosiphon aurantiacus ATCC 23779 RepID=A9AXX4_HERA2 Length = 197 Score = 81.2 bits (200), Expect = 8e-15, Method: Composition-based stats. Identities = 25/69 (36%), Positives = 41/69 (59%), Gaps = 2/69 (2%) Query: 1 MSNKMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQR 60 M+ + TG V WF+ +K +GFIT G+ +FVH A+ + R L E ++V F + +G + Sbjct: 1 MNERSTGTVAWFDPEKSYGFITTHAGAS-LFVHRRAL-GDGRRWLVEGEEVSFVVVRGMK 58 Query: 61 GPAAANVVT 69 G A +V+ Sbjct: 59 GDEANDVLV 67 >UniRef50_B7RPT8 Cold shock protein n=1 Tax=Roseobacter sp. GAI101 RepID=B7RPT8_9RHOB Length = 182 Score = 80.9 bits (199), Expect = 1e-14, Method: Composition-based stats. Identities = 22/65 (33%), Positives = 38/65 (58%) Query: 6 TGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPAAA 65 TGLVKWF+ KGFGF+ D+G D+ +H +++ ++ + ++E + + QRG A Sbjct: 12 TGLVKWFDPAKGFGFVVSDEGGPDILLHVNVLRNYGQSSVADGARIELTAHETQRGVQAT 71 Query: 66 NVVTL 70 V + Sbjct: 72 QVHAI 76 Score = 65.8 bits (160), Expect = 4e-10, Method: Composition-based stats. Identities = 20/62 (32%), Positives = 30/62 (48%) Query: 8 LVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPAAANV 67 VKWF+ KGFGF S D+F+H ++ + L + + + G+RG AA V Sbjct: 107 RVKWFDKSKGFGFANVFGRSDDIFLHIEVLRQSGLSDLQPGEALALRVIMGERGHMAAEV 166 Query: 68 VT 69 Sbjct: 167 HA 168 >UniRef50_C4K358 RNA chaperone, transcription antiterminator n=3 Tax=Enterobacteriaceae RepID=C4K358_HAMD5 Length = 69 Score = 80.9 bits (199), Expect = 1e-14, Method: Composition-based stats. Identities = 29/70 (41%), Positives = 43/70 (61%), Gaps = 1/70 (1%) Query: 1 MSNKMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQR 60 M+ K G VKWF+ G+GFI+P+DG D++VH AI + + ++L Q VEFS Sbjct: 1 MTLK-KGKVKWFDKIAGYGFISPEDGGLDIYVHKAAIANIKDKSLIAGQDVEFSYRVSFH 59 Query: 61 GPAAANVVTL 70 GP+A +V+ Sbjct: 60 GPSAEDVIAF 69 >UniRef50_B0VIQ0 Cold-shock domain family protein n=2 Tax=Bacteria RepID=B0VIQ0_9BACT Length = 74 Score = 80.5 bits (198), Expect = 1e-14, Method: Composition-based stats. Identities = 28/73 (38%), Positives = 44/73 (60%), Gaps = 4/73 (5%) Query: 1 MSNKMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLN---ENQKVEFSIEQ 57 M M G VKWFN +KG+GFI DD +K+ FVH+ +I +N R L +++ V F + + Sbjct: 1 MRFNMKGKVKWFNKNKGYGFIITDD-NKEYFVHWKSIVTNSPRELKVLEQDELVTFDLME 59 Query: 58 GQRGPAAANVVTL 70 +G A N++ + Sbjct: 60 TDKGIQAINIIRV 72 >UniRef50_B0W4X1 Putative uncharacterized protein n=1 Tax=Culex quinquefasciatus RepID=B0W4X1_CULQU Length = 247 Score = 80.1 bits (197), Expect = 2e-14, Method: Composition-based stats. Identities = 24/62 (38%), Positives = 37/62 (59%), Gaps = 4/62 (6%) Query: 2 SNKMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAI----QSNEFRTLNENQKVEFSIEQ 57 + ++TG VKWFN GFGFIT D +D+FVH ++I + R++ E + VEF + Sbjct: 49 NKRITGTVKWFNVKDGFGFITRHDTGEDLFVHQSSILRPNSRHSVRSVGEGEVVEFGVIA 108 Query: 58 GQ 59 + Sbjct: 109 TK 110 >UniRef50_D1S746 Cold-shock DNA-binding domain protein n=1 Tax=Micromonospora aurantiaca ATCC 27029 RepID=D1S746_9ACTO Length = 165 Score = 80.1 bits (197), Expect = 2e-14, Method: Composition-based stats. Identities = 26/65 (40%), Positives = 37/65 (56%), Gaps = 1/65 (1%) Query: 5 MTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPAA 64 +TG V F+ +G+GFI PDDGS DVFVH + +++ L VE+ + +RGP A Sbjct: 8 LTGKVVRFDEVRGYGFIAPDDGSDDVFVHANMLDGDKW-ALTPGVPVEYDAVETERGPKA 66 Query: 65 ANVVT 69 V Sbjct: 67 VLVRV 71 >UniRef50_C4RFH3 DNA binding protein n=1 Tax=Micromonospora sp. ATCC 39149 RepID=C4RFH3_9ACTO Length = 150 Score = 79.7 bits (196), Expect = 3e-14, Method: Composition-based stats. Identities = 25/66 (37%), Positives = 36/66 (54%), Gaps = 1/66 (1%) Query: 5 MTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPAA 64 +TG V F+ +G+GFI PD G DVFVH + +++ L VE+ + +RGP A Sbjct: 2 LTGRVVRFDEVRGYGFIAPDGGGDDVFVHANTVDGDKW-ALGPGVPVEYEAVENERGPKA 60 Query: 65 ANVVTL 70 V L Sbjct: 61 LTVRVL 66 >UniRef50_A1B0C7 Cold-shock DNA-binding protein family n=28 Tax=Rhodobacterales RepID=A1B0C7_PARDP Length = 197 Score = 79.7 bits (196), Expect = 3e-14, Method: Composition-based stats. Identities = 23/67 (34%), Positives = 38/67 (56%) Query: 4 KMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPA 63 K+ G+VKWF+ KGFGF+T DG D+ +H +++ ++ E V I++ RG Sbjct: 10 KIAGVVKWFDGSKGFGFLTDPDGGADILLHANVLRNFGQSSVAEGSHVIAIIQKTPRGMQ 69 Query: 64 AANVVTL 70 A V+ + Sbjct: 70 AVEVLEI 76 Score = 65.8 bits (160), Expect = 4e-10, Method: Composition-based stats. Identities = 20/62 (32%), Positives = 32/62 (51%) Query: 8 LVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPAAANV 67 VKWF+ KGFGF DVF+H ++ + F L + + + G+RG AA + Sbjct: 107 RVKWFDKAKGFGFANIFADKADVFLHVEVLRHSGFADLAVGEAIALRVVDGRRGMMAAQI 166 Query: 68 VT 69 ++ Sbjct: 167 LS 168 >UniRef50_UPI0001B4CA82 DNA-binding protein n=1 Tax=Streptomyces viridochromogenes DSM 40736 RepID=UPI0001B4CA82 Length = 164 Score = 79.3 bits (195), Expect = 4e-14, Method: Composition-based stats. Identities = 25/62 (40%), Positives = 34/62 (54%), Gaps = 1/62 (1%) Query: 6 TGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPAAA 65 G+V F+ KG+GFI PD+G +DVFVH + TL +V F + G RG A Sbjct: 3 QGVVVRFDDVKGYGFIAPDNGGEDVFVHVNDLAEPG-TTLTSGTRVVFDVLDGGRGLKAY 61 Query: 66 NV 67 +V Sbjct: 62 DV 63 >UniRef50_Q1QLF4 Cold-shock DNA-binding protein family n=1 Tax=Nitrobacter hamburgensis X14 RepID=Q1QLF4_NITHX Length = 68 Score = 79.3 bits (195), Expect = 4e-14, Method: Composition-based stats. Identities = 26/66 (39%), Positives = 41/66 (62%), Gaps = 2/66 (3%) Query: 6 TGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRG-PAA 64 TG VK+FNA+KG+GFI PDDG+ D+F+H + +++ R +VE+ + +G G A Sbjct: 3 TGSVKFFNAEKGYGFIQPDDGTPDIFLHVHGL-ADKLRYPCPRDRVEYEVGKGPDGRLRA 61 Query: 65 ANVVTL 70 V + Sbjct: 62 ERVALI 67 >UniRef50_B9T6B7 Cold shock protein, putative n=1 Tax=Ricinus communis RepID=B9T6B7_RICCO Length = 257 Score = 79.3 bits (195), Expect = 4e-14, Method: Composition-based stats. Identities = 22/69 (31%), Positives = 37/69 (53%), Gaps = 1/69 (1%) Query: 2 SNKMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRG 61 + + G++ W++ +KG+GFI P+ G DVFVH ++++SN L +E+ G Sbjct: 107 NKRARGILIWYSNEKGYGFIKPNGGGVDVFVHSSSLKSNGHIHLGAGMPLEYETIISNAG 166 Query: 62 -PAAANVVT 69 A NV Sbjct: 167 KLQAINVTA 175 >UniRef50_D2RAW4 Cold-shock DNA-binding domain protein n=2 Tax=Bifidobacteriaceae RepID=D2RAW4_GARVA Length = 129 Score = 79.3 bits (195), Expect = 4e-14, Method: Composition-based stats. Identities = 27/65 (41%), Positives = 43/65 (66%), Gaps = 4/65 (6%) Query: 7 GLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPAAA- 65 G V+W++ KG+GFI DDG KDVF+ A+ ++L++ +VEFS+ +G++GP A Sbjct: 4 GRVRWYDTQKGYGFIVGDDG-KDVFLPAAALPVT-VKSLHKGTRVEFSVIEGRKGPQAMG 61 Query: 66 -NVVT 69 NV+ Sbjct: 62 LNVIA 66 >UniRef50_Q2RZT3 Conserved domain protein n=2 Tax=Salinibacter ruber DSM 13855 RepID=Q2RZT3_SALRD Length = 75 Score = 78.9 bits (194), Expect = 5e-14, Method: Composition-based stats. Identities = 26/62 (41%), Positives = 37/62 (59%), Gaps = 1/62 (1%) Query: 6 TGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQ-SNEFRTLNENQKVEFSIEQGQRGPAA 64 G +K+F+ +GFGFI P DGS+DVF+H I L E Q +E+ EQ ++G +A Sbjct: 3 KGKLKFFDTSRGFGFIEPLDGSEDVFLHANNISGMTSGEDLREGQTIEYETEQTEKGLSA 62 Query: 65 AN 66 N Sbjct: 63 LN 64 >UniRef50_A1UT19 Cold-shock DNA-binding family protein n=1 Tax=Bartonella bacilliformis KC583 RepID=A1UT19_BARBK Length = 179 Score = 78.5 bits (193), Expect = 6e-14, Method: Composition-based stats. Identities = 24/68 (35%), Positives = 44/68 (64%), Gaps = 1/68 (1%) Query: 4 KMTGLVKWFNADKGFGFITPD-DGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGP 62 ++TG++KWF++ KG+GF+TPD D+ +H + +Q + F+T E KV S+++ +RG Sbjct: 13 EITGIIKWFDSSKGYGFVTPDFPKLPDILLHISVMQRDGFQTALEGAKVVCSVKKTKRGL 72 Query: 63 AAANVVTL 70 V ++ Sbjct: 73 KCIQVKSI 80 Score = 70.1 bits (171), Expect = 2e-11, Method: Composition-based stats. Identities = 21/62 (33%), Positives = 34/62 (54%) Query: 8 LVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPAAANV 67 +VKWFN DKGFGF++ G++D+F+H ++ L Q V +G++G A + Sbjct: 109 IVKWFNRDKGFGFLSRGQGTEDIFIHMETLRRFGLTELRAGQVVIVRFGKGEKGLMTAEI 168 Query: 68 VT 69 Sbjct: 169 YP 170 >UniRef50_Q2RNN9 Cold-shock DNA-binding protein family n=2 Tax=Rhodospirillum RepID=Q2RNN9_RHORT Length = 210 Score = 78.5 bits (193), Expect = 6e-14, Method: Composition-based stats. Identities = 24/67 (35%), Positives = 36/67 (53%) Query: 1 MSNKMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQR 60 M ++ T VKWFNA KGFGF+ DG D F+H + +Q + L E + + GQ+ Sbjct: 1 MLSRSTATVKWFNATKGFGFVRVSDGEPDAFLHISVLQRAGYSELPEGATIVCDLAPGQK 60 Query: 61 GPAAANV 67 G + + Sbjct: 61 GMQVSEI 67 Score = 75.5 bits (185), Expect = 4e-13, Method: Composition-based stats. Identities = 28/62 (45%), Positives = 40/62 (64%) Query: 3 NKMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGP 62 ++ G+VK+F+ADKGFGF+ PD G KDV+V +Q L + Q+V SI G++GP Sbjct: 143 TEIDGVVKFFSADKGFGFVVPDGGGKDVYVGSRTLQDCGVSVLEQGQRVRMSIRMGKKGP 202 Query: 63 AA 64 A Sbjct: 203 MA 204 >UniRef50_C6A7D6 Cold shock protein n=5 Tax=Bifidobacteriaceae RepID=C6A7D6_BIFLB Length = 147 Score = 78.5 bits (193), Expect = 6e-14, Method: Composition-based stats. Identities = 28/65 (43%), Positives = 40/65 (61%), Gaps = 2/65 (3%) Query: 6 TGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPAAA 65 +G ++WF+A KG+GFI DDG KDVF+ TA+ R + KVE+S+ +G RG A Sbjct: 21 SGRIRWFDAKKGYGFIAGDDG-KDVFLPQTALPQ-GVRNPRKGAKVEYSVIEGNRGQVAM 78 Query: 66 NVVTL 70 V + Sbjct: 79 GVTMV 83 >UniRef50_A0M1Q5 Cold shock-like protein n=13 Tax=Bacteria RepID=A0M1Q5_GRAFK Length = 64 Score = 78.5 bits (193), Expect = 6e-14, Method: Composition-based stats. Identities = 27/64 (42%), Positives = 41/64 (64%), Gaps = 4/64 (6%) Query: 7 GLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPAAAN 66 G VK+FN KGFGFI DD ++D+FVH + + + E+ +V+F +EQG++G A N Sbjct: 4 GKVKFFNNTKGFGFIKADDSNEDIFVHSSGLIDE----IREDDRVQFEVEQGKKGLNAVN 59 Query: 67 VVTL 70 V + Sbjct: 60 VEVI 63 >UniRef50_Q5Z0N3 Putative cold shock protein n=2 Tax=Bacteria RepID=Q5Z0N3_NOCFA Length = 89 Score = 78.5 bits (193), Expect = 6e-14, Method: Composition-based stats. Identities = 30/70 (42%), Positives = 39/70 (55%), Gaps = 3/70 (4%) Query: 2 SNKMTGLVKWFNADKGFGFITPDDGSK-DVFVHFTAIQSNEFRTLNENQKVEFSIEQGQR 60 S G V WF+A KGFGFI P +G + VFV F++I+ + +RTL E Q V F G+ Sbjct: 12 STWYHGTVAWFDAPKGFGFIEPAEGPRGPVFVDFSSIEMSGYRTLVEGQPVRFVRSAGR- 70 Query: 61 GPAAANVVTL 70 A V L Sbjct: 71 -AEAVAVRPL 79 >UniRef50_C5RAK7 Cold shock protein CspA n=1 Tax=Weissella paramesenteroides ATCC 33313 RepID=C5RAK7_WEIPA Length = 69 Score = 78.2 bits (192), Expect = 7e-14, Method: Composition-based stats. Identities = 34/68 (50%), Positives = 43/68 (63%), Gaps = 1/68 (1%) Query: 3 NKMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGP 62 K++G VK + +DKGFGFI G DVFVHF+AIQ+ R L Q+V+ + QG RGP Sbjct: 2 EKISGYVKTWQSDKGFGFIE-LKGEDDVFVHFSAIQTPRVRDLTVGQEVKLVVVQGIRGP 60 Query: 63 AAANVVTL 70 AA V L Sbjct: 61 QAAAVEVL 68 >UniRef50_B0T0Q8 Cold-shock DNA-binding domain protein n=2 Tax=Caulobacteraceae RepID=B0T0Q8_CAUSK Length = 201 Score = 78.2 bits (192), Expect = 7e-14, Method: Composition-based stats. Identities = 25/71 (35%), Positives = 40/71 (56%), Gaps = 4/71 (5%) Query: 4 KMTGLVKWFNADKGFGFITPDD----GSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQ 59 +++G VKWF+ KG+GFI PDD G KDV +H T++++ T E + + + Sbjct: 17 RISGRVKWFDTGKGYGFIVPDDPGQTGLKDVLLHVTSLRNCGRETALEGAVIVCDVVKRP 76 Query: 60 RGPAAANVVTL 70 +G + VV L Sbjct: 77 KGWQVSEVVDL 87 Score = 72.8 bits (178), Expect = 3e-12, Method: Composition-based stats. Identities = 19/62 (30%), Positives = 28/62 (45%) Query: 8 LVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPAAANV 67 VKWFN KG+GF+ D D+FVH ++ L V +G +G A + Sbjct: 137 KVKWFNRTKGYGFVVRDGQPGDIFVHIETLRRGGLEDLQPGDDVMVRFAEGPKGLVVAEI 196 Query: 68 VT 69 + Sbjct: 197 TS 198 >UniRef50_A9KN41 Cold-shock DNA-binding domain protein n=22 Tax=Firmicutes RepID=A9KN41_CLOPH Length = 70 Score = 78.2 bits (192), Expect = 8e-14, Method: Composition-based stats. Identities = 25/63 (39%), Positives = 46/63 (73%), Gaps = 2/63 (3%) Query: 6 TGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEF-RTLNENQKVEFSIEQGQRGPAA 64 TG VKW+++++G+GF++ +DG +DVF+H + I+ F + ++E + + F I + ++GPAA Sbjct: 5 TGTVKWYDSERGYGFVSTNDG-RDVFLHHSQIKEKGFDKEVHEGESIGFDIIEQEKGPAA 63 Query: 65 ANV 67 NV Sbjct: 64 INV 66 >UniRef50_C9NB66 Cold-shock DNA-binding domain protein n=1 Tax=Streptomyces flavogriseus ATCC 33331 RepID=C9NB66_9ACTO Length = 70 Score = 78.2 bits (192), Expect = 8e-14, Method: Composition-based stats. Identities = 26/61 (42%), Positives = 35/61 (57%) Query: 7 GLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPAAAN 66 G V+ F+A+KG+G+I P G ++ VHF+AI L Q V F I Q +RGP A Sbjct: 4 GTVQVFSAEKGYGYIRPSTGGPEIIVHFSAIVEACPVGLVAGQTVSFDIVQRRRGPEAER 63 Query: 67 V 67 V Sbjct: 64 V 64 >UniRef50_B7G5B5 Predicted protein n=1 Tax=Phaeodactylum tricornutum CCAP 1055/1 RepID=B7G5B5_PHATR Length = 286 Score = 77.4 bits (190), Expect = 1e-13, Method: Composition-based stats. Identities = 30/74 (40%), Positives = 47/74 (63%), Gaps = 7/74 (9%) Query: 3 NKMTGLVKWFNADKGFGFITPDD----GSKDVFVHFTAIQSNE-FRTLNENQKVEFSIE- 56 +K+ G VKWF++ KG+GF+ P ++++FVH T+IQS +RTL EN ++EF +E Sbjct: 2 SKVQGTVKWFDSRKGYGFVAPTSDNSPTAEEIFVHQTSIQSEGAYRTLVENSEIEFDVEK 61 Query: 57 QGQRGP-AAANVVT 69 + + G A NV Sbjct: 62 EAESGKFKAINVTA 75 >UniRef50_Q2RQP4 Cold-shock DNA-binding protein family n=1 Tax=Rhodospirillum rubrum ATCC 11170 RepID=Q2RQP4_RHORT Length = 70 Score = 77.4 bits (190), Expect = 1e-13, Method: Composition-based stats. Identities = 27/61 (44%), Positives = 37/61 (60%), Gaps = 1/61 (1%) Query: 6 TGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPAAA 65 TG VKWFN KGFGFI PDDG D FVH +A++ + R+ + S ++ +R P A+ Sbjct: 3 TGTVKWFNVQKGFGFIAPDDGGSDAFVHISAVERSSDRSP-PGYRCRESRDRKRRWPGAS 61 Query: 66 N 66 Sbjct: 62 R 62 >UniRef50_Q607Y7 Cold-shock DNA-binding domain protein n=1 Tax=Methylococcus capsulatus RepID=Q607Y7_METCA Length = 305 Score = 77.4 bits (190), Expect = 1e-13, Method: Composition-based stats. Identities = 22/67 (32%), Positives = 37/67 (55%) Query: 4 KMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPA 63 +++G V F +KGFGFITPD+G + F H + + E + ++ F+ + +G A Sbjct: 236 EISGTVLSFFHEKGFGFITPDNGGDNFFFHVSDLTGIEASDVCAGLRISFNAGRNDKGLA 295 Query: 64 AANVVTL 70 A N+ L Sbjct: 296 AHNIRKL 302 >UniRef50_D0LBW3 Cold-shock protein DNA-binding protein n=2 Tax=Corynebacterineae RepID=D0LBW3_GORB4 Length = 164 Score = 77.4 bits (190), Expect = 1e-13, Method: Composition-based stats. Identities = 24/65 (36%), Positives = 37/65 (56%), Gaps = 1/65 (1%) Query: 5 MTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPAA 64 ++G V ++ ++GFGF+ P+ G DVF+H I +E +L KV F +E+ RG A Sbjct: 7 VSGKVVHYDTNRGFGFLAPESGGADVFLHINDIDIDE-SSLKPGAKVSFDVEETDRGAKA 65 Query: 65 ANVVT 69 NV Sbjct: 66 VNVAV 70 >UniRef50_Q2RWM8 Cold-shock DNA-binding protein family n=1 Tax=Rhodospirillum rubrum ATCC 11170 RepID=Q2RWM8_RHORT Length = 68 Score = 77.4 bits (190), Expect = 1e-13, Method: Composition-based stats. Identities = 22/66 (33%), Positives = 39/66 (59%) Query: 5 MTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPAA 64 +TG + WF+ G+GFI PDDG D+ V A+ + R+L + Q+V + + + + G A Sbjct: 2 LTGTITWFDTINGYGFIRPDDGGGDIAVDMPALDRSGLRSLRDGQRVAYRLTRPRFGGAM 61 Query: 65 ANVVTL 70 A ++ + Sbjct: 62 AGMIRM 67 >UniRef50_Q042Q8 Cold-shock DNA-binding protein family n=18 Tax=Lactobacillus RepID=Q042Q8_LACGA Length = 69 Score = 77.0 bits (189), Expect = 2e-13, Method: Composition-based stats. Identities = 20/62 (32%), Positives = 34/62 (54%) Query: 6 TGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPAAA 65 G VK F+++ +GFI D FV + +I+ ++ LN Q+V + + QG++G Sbjct: 3 KGTVKQFDSNSAYGFIEDDLTHSSYFVFYKSIKEEGYKKLNVGQRVRYQLAQGKKGLQCI 62 Query: 66 NV 67 NV Sbjct: 63 NV 64 >UniRef50_A6ESQ3 Cold shock protein n=2 Tax=Bacteroidetes RepID=A6ESQ3_9BACT Length = 63 Score = 77.0 bits (189), Expect = 2e-13, Method: Composition-based stats. Identities = 27/65 (41%), Positives = 38/65 (58%), Gaps = 4/65 (6%) Query: 6 TGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPAAA 65 G+VK+FN KGFGFIT + KD FVH + + + E +VEF +++G +G A Sbjct: 3 KGIVKFFNDSKGFGFITEEGQEKDHFVHISGLIDE----VREGDEVEFELKEGNKGLNAV 58 Query: 66 NVVTL 70 NV L Sbjct: 59 NVRVL 63 >UniRef50_D2QU65 Cold-shock DNA-binding domain protein n=23 Tax=Bacteroidetes RepID=D2QU65_9SPHI Length = 68 Score = 77.0 bits (189), Expect = 2e-13, Method: Composition-based stats. Identities = 26/65 (40%), Positives = 40/65 (61%), Gaps = 3/65 (4%) Query: 6 TGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPAAA 65 TG+VK+FN KG+GFI DD ++D+FVH T + T+ E +V+F + G++G A Sbjct: 3 TGVVKFFNESKGYGFIVEDDTNRDIFVHITGLNGI---TIREKDRVQFEVVDGKKGLNAV 59 Query: 66 NVVTL 70 V + Sbjct: 60 KVKKI 64 >UniRef50_Q7NNC3 Gsr0488 protein n=1 Tax=Gloeobacter violaceus RepID=Q7NNC3_GLOVI Length = 65 Score = 76.6 bits (188), Expect = 2e-13, Method: Composition-based stats. Identities = 25/60 (41%), Positives = 36/60 (60%) Query: 8 LVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPAAANV 67 +V+WF+ G+G I DD ++VF+ FTAI +RT+ + V F + QG GP A NV Sbjct: 1 MVRWFDLQAGYGAIARDDTGEEVFLLFTAIPGEGYRTIAPSTAVHFELAQGPSGPVARNV 60 >UniRef50_Q28PH1 Cold-shock DNA-binding protein family n=11 Tax=Rhodobacterales RepID=Q28PH1_JANSC Length = 181 Score = 76.6 bits (188), Expect = 2e-13, Method: Composition-based stats. Identities = 20/70 (28%), Positives = 37/70 (52%) Query: 1 MSNKMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQR 60 + + G+VKWF+ KGFGF+ D+G D+ +H ++S ++ E +V + R Sbjct: 18 ICPTVAGVVKWFDTTKGFGFVLSDEGGPDILLHANVLRSFGRGSIAEGARVMLRTQATGR 77 Query: 61 GPAAANVVTL 70 G A ++ + Sbjct: 78 GLQAVEIIAI 87 Score = 73.2 bits (179), Expect = 2e-12, Method: Composition-based stats. Identities = 25/62 (40%), Positives = 32/62 (51%) Query: 8 LVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPAAANV 67 VKWF+ KGFGF S+DVFVH ++ + F L + V + G RG AA V Sbjct: 116 RVKWFDKAKGFGFANVFGHSEDVFVHVEVLRRSGFTELQPGEAVAMKVVDGPRGRMAAEV 175 Query: 68 VT 69 T Sbjct: 176 RT 177 >UniRef50_Q9XTJ6 Protein Y39A1C.3, confirmed by transcript evidence n=2 Tax=Caenorhabditis RepID=Q9XTJ6_CAEEL Length = 294 Score = 76.6 bits (188), Expect = 2e-13, Method: Composition-based stats. Identities = 29/76 (38%), Positives = 43/76 (56%), Gaps = 8/76 (10%) Query: 1 MSNKMTGLVKWFNADKGFGFITPD---DGSKDVFVHFTAIQSNE-----FRTLNENQKVE 52 + + G VKWF+ +GF+ D D ++D FVH TAI + RTL++++ V Sbjct: 85 IETGVKGHVKWFSVRGRYGFVARDKPTDENEDFFVHQTAITKSSTIKFYLRTLDDDEPVV 144 Query: 53 FSIEQGQRGPAAANVV 68 F I +G +GP AANV Sbjct: 145 FDIVEGLKGPEAANVT 160 >UniRef50_B9KHN5 Cold shock protein (CspA) n=10 Tax=Anaplasmataceae RepID=B9KHN5_ANAMF Length = 92 Score = 76.6 bits (188), Expect = 2e-13, Method: Composition-based stats. Identities = 28/78 (35%), Positives = 41/78 (52%), Gaps = 13/78 (16%) Query: 6 TGLVKWFNADKGFGFITPDD-------------GSKDVFVHFTAIQSNEFRTLNENQKVE 52 TG VKWF+ +KG+GFI D G KDVFVH T++Q + L E Q+V Sbjct: 13 TGHVKWFSVEKGYGFICKDGSDDGKSGGASFGRGDKDVFVHITSLQRSRIDNLREGQRVR 72 Query: 53 FSIEQGQRGPAAANVVTL 70 + +++ +A N+ L Sbjct: 73 YQLDESNGKVSAVNLEVL 90 >UniRef50_D0Z9M8 Cold shock-like protein n=3 Tax=Enterobacteriaceae RepID=D0Z9M8_EDWTE Length = 69 Score = 76.2 bits (187), Expect = 3e-13, Method: Composition-based stats. Identities = 29/69 (42%), Positives = 42/69 (60%), Gaps = 1/69 (1%) Query: 1 MSNKMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQR 60 M+ KM G VKW++ G G I+P DG D++V+ T I S + L E Q+VEFS +G+R Sbjct: 1 MTLKM-GFVKWYDPSAGLGVISPLDGGDDLYVNRTGIASARNKLLREGQRVEFSTPRGRR 59 Query: 61 GPAAANVVT 69 A +V+ Sbjct: 60 SQMAEDVIA 68 >UniRef50_Q17JD9 Putative uncharacterized protein n=1 Tax=Aedes aegypti RepID=Q17JD9_AEDAE Length = 192 Score = 76.2 bits (187), Expect = 3e-13, Method: Composition-based stats. Identities = 27/71 (38%), Positives = 38/71 (53%), Gaps = 11/71 (15%) Query: 2 SNKMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEF----RTLNENQKVEFSIEQ 57 S ++TG VKWFNA GFGFIT D +D+FVH + I +++ + + VEF Sbjct: 31 SKRITGTVKWFNAKDGFGFITRHDTGEDIFVHKSCIFKPNRNHFTKSIGDGEIVEF---- 86 Query: 58 GQRGPAAANVV 68 G A+ V Sbjct: 87 ---GLIASKVT 94 >UniRef50_Q5YWN3 Putative cold shock protein n=1 Tax=Nocardia farcinica RepID=Q5YWN3_NOCFA Length = 130 Score = 75.9 bits (186), Expect = 3e-13, Method: Composition-based stats. Identities = 26/64 (40%), Positives = 38/64 (59%), Gaps = 1/64 (1%) Query: 7 GLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPAAAN 66 G + F++ +GFGFI P+DG DVFVH I +E L + + EF + +G RGP A N Sbjct: 6 GKLVSFDSSRGFGFIRPEDGGPDVFVHVNDIGLDE-DELRQGRVFEFDVTEGDRGPKAIN 64 Query: 67 VVTL 70 + + Sbjct: 65 LSAV 68 >UniRef50_C6C161 Cold-shock DNA-binding domain protein n=1 Tax=Desulfovibrio salexigens DSM 2638 RepID=C6C161_DESAD Length = 69 Score = 75.9 bits (186), Expect = 4e-13, Method: Composition-based stats. Identities = 25/66 (37%), Positives = 39/66 (59%), Gaps = 1/66 (1%) Query: 5 MTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPAA 64 + G+V WFN KGFGFI D+ +D++VH++ + + F+TLN +KV F + P A Sbjct: 3 LKGVVSWFNDIKGFGFIV-DEAGRDIYVHYSEVLRDGFKTLNVGEKVVFEVIDEDTAPKA 61 Query: 65 ANVVTL 70 V + Sbjct: 62 TAVRII 67 >UniRef50_Q0APJ7 Cold-shock DNA-binding protein family n=1 Tax=Maricaulis maris MCS10 RepID=Q0APJ7_MARMM Length = 174 Score = 75.5 bits (185), Expect = 5e-13, Method: Composition-based stats. Identities = 20/62 (32%), Positives = 35/62 (56%) Query: 8 LVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPAAANV 67 +VKWF+A +G+GF+T D+ DVF+H ++ F + ++E +G +G AA + Sbjct: 109 VVKWFDALRGYGFVTCDNVEGDVFLHAATLRRAGFEDIQPGDRIEVRCVEGPKGALAAEI 168 Query: 68 VT 69 Sbjct: 169 KV 170 Score = 72.4 bits (177), Expect = 4e-12, Method: Composition-based stats. Identities = 19/67 (28%), Positives = 34/67 (50%) Query: 4 KMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPA 63 ++ G VKW++ +G+GFI DG D+ +H + ++ N K+ QG +G Sbjct: 15 ELEGRVKWYDPARGYGFIDASDGEGDILLHASCLRRFGQGPALPNAKIVCKAVQGDKGRQ 74 Query: 64 AANVVTL 70 A +V + Sbjct: 75 AVELVEM 81 >UniRef50_C6XG83 Cold shock protein n=1 Tax=Candidatus Liberibacter asiaticus str. psy62 RepID=C6XG83_LIBAP Length = 78 Score = 75.5 bits (185), Expect = 5e-13, Method: Composition-based stats. Identities = 23/56 (41%), Positives = 32/56 (57%), Gaps = 3/56 (5%) Query: 7 GLVKWFNADKGFGFITPD---DGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQ 59 G +KW+N DKG+GFITP+ + DVF+H +A+ S L E Q V + Q Sbjct: 5 GSIKWYNPDKGYGFITPEGSTESGDDVFLHRSAVASAGLFNLTEGQLVTYDYVQND 60 >UniRef50_D1XSW6 Cold-shock DNA-binding domain protein n=3 Tax=Streptomyces RepID=D1XSW6_9ACTO Length = 143 Score = 75.5 bits (185), Expect = 5e-13, Method: Composition-based stats. Identities = 24/62 (38%), Positives = 33/62 (53%), Gaps = 1/62 (1%) Query: 7 GLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPAAAN 66 G V F+ +G+GFI P+ G +DVF+H + E + VEF IE G RG A+ Sbjct: 4 GRVIRFDGMRGYGFIAPEHGGEDVFMHVNDLLIPE-SAVRAGLMVEFEIEDGDRGLKASE 62 Query: 67 VV 68 V Sbjct: 63 VR 64 >UniRef50_A5VJ42 Cold-shock DNA-binding protein family n=10 Tax=Lactobacillus RepID=A5VJ42_LACRD Length = 67 Score = 75.5 bits (185), Expect = 6e-13, Method: Composition-based stats. Identities = 27/66 (40%), Positives = 41/66 (62%), Gaps = 1/66 (1%) Query: 5 MTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPAA 64 + G VK F+ KG+GFIT + +FVH++ I+ R L+ +++V I QGQ+GP A Sbjct: 2 LKGKVKSFDEQKGWGFITVPHEGE-IFVHYSGIEGTRRRILHPDEEVSLVIVQGQKGPQA 60 Query: 65 ANVVTL 70 A+V L Sbjct: 61 AHVRVL 66 >UniRef50_Q013V8 Glycogen debranching enzyme (ISS) n=1 Tax=Ostreococcus tauri RepID=Q013V8_OSTTA Length = 141 Score = 74.7 bits (183), Expect = 8e-13, Method: Composition-based stats. Identities = 25/66 (37%), Positives = 40/66 (60%), Gaps = 7/66 (10%) Query: 9 VKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNE------NQKVEFSIEQGQRGP 62 V WFN +G+G++ P DGS+DVFVH + +Q + FR++ E ++EF ++ +R Sbjct: 44 VTWFNCVRGYGYVRPHDGSEDVFVHQSELQMDGFRSVWEVRLQQAGDEIEFELDDDER-R 102 Query: 63 AAANVV 68 A NV Sbjct: 103 RAKNVT 108 >UniRef50_Q56922 Major cold shock protein (Fragment) n=404 Tax=Bacteria RepID=CSPA_YEREN Length = 46 Score = 74.7 bits (183), Expect = 8e-13, Method: Composition-based stats. Identities = 37/46 (80%), Positives = 42/46 (91%) Query: 15 DKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQR 60 DKGFGFITP DGSKDVFVHF+AIQSN+F+TL+E QKVEFSIE G + Sbjct: 1 DKGFGFITPADGSKDVFVHFSAIQSNDFKTLDEGQKVEFSIENGAK 46 >UniRef50_B9K345 CspA-like protein n=3 Tax=Agrobacterium RepID=B9K345_AGRVS Length = 99 Score = 74.7 bits (183), Expect = 8e-13, Method: Composition-based stats. Identities = 22/56 (39%), Positives = 33/56 (58%), Gaps = 1/56 (1%) Query: 6 TGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIE-QGQR 60 TG +KWF+ KG+GFIT DDG DVF+H + + TL ++ + + QG + Sbjct: 3 TGKLKWFDTTKGYGFITSDDGGPDVFLHLSKVTEANLPTLQPGVRLRYVLGRQGNK 58 >UniRef50_C8WB38 Cold-shock DNA-binding domain protein n=3 Tax=Zymomonas mobilis RepID=C8WB38_ZYMMN Length = 189 Score = 74.7 bits (183), Expect = 8e-13, Method: Composition-based stats. Identities = 22/66 (33%), Positives = 35/66 (53%) Query: 5 MTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPAA 64 +TG VKWF+ KGFGF+ G D+ +HF+ +Q R L E V+ + ++G A Sbjct: 28 ITGYVKWFDIIKGFGFLIGSKGEGDILIHFSLLQEYGKRFLPEGSWVKCLARRSRQGWKA 87 Query: 65 ANVVTL 70 ++ Sbjct: 88 HKILAF 93 Score = 63.9 bits (155), Expect = 2e-09, Method: Composition-based stats. Identities = 17/57 (29%), Positives = 29/57 (50%) Query: 8 LVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPAA 64 VKWFN KG+GF+ + +D+FVH A + + + + + Q +G +A Sbjct: 123 TVKWFNRTKGYGFLIRNADQQDIFVHAEAFHAAGIKKFEAGKSLYACLRQSDKGLSA 179 >UniRef50_Q475L4 Cold-shock DNA-binding protein family n=1 Tax=Ralstonia eutropha JMP134 RepID=Q475L4_RALEJ Length = 195 Score = 74.7 bits (183), Expect = 9e-13, Method: Composition-based stats. Identities = 23/70 (32%), Positives = 36/70 (51%), Gaps = 2/70 (2%) Query: 1 MSNKMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQR 60 M+ +++G +K +N DKGFGFI P +G +D+FVH + + + F + Q Sbjct: 8 MNTRISGTLKSWNKDKGFGFIAPSNGGRDIFVHISDYPRQG-GMPKIGESLTFLVTLNQD 66 Query: 61 GP-AAANVVT 69 G A NV Sbjct: 67 GKNKAINVQR 76 >UniRef50_Q0RYK4 Probable cold shock protein CspA n=1 Tax=Rhodococcus jostii RHA1 RepID=Q0RYK4_RHOSR Length = 79 Score = 73.9 bits (181), Expect = 1e-12, Method: Composition-based stats. Identities = 27/54 (50%), Positives = 35/54 (64%), Gaps = 3/54 (5%) Query: 13 NADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPAAAN 66 N +KGFGF PD G VFVHF+ I F+TL+E Q +E+ + QGQ+G A N Sbjct: 25 NGEKGFGFTAPDGG---VFVHFSEIAGRGFKTLDEGQHMEYEVSQGQKGVQAEN 75 >UniRef50_Q6ALH9 Hypothetical cold-shock protein n=1 Tax=Desulfotalea psychrophila RepID=Q6ALH9_DESPS Length = 204 Score = 73.9 bits (181), Expect = 2e-12, Method: Composition-based stats. Identities = 24/62 (38%), Positives = 34/62 (54%), Gaps = 2/62 (3%) Query: 7 GLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRG-PAAA 65 G +K +N +KG+GFITPD+G DVF+H A + R Q + + G +G A Sbjct: 4 GTIKHWNDEKGYGFITPDNGGNDVFLHIKAFKKRPHR-PEIGQVISYGTTSGDKGRLRAC 62 Query: 66 NV 67 NV Sbjct: 63 NV 64 >UniRef50_C6XKA2 Cold-shock DNA-binding domain protein n=1 Tax=Hirschia baltica ATCC 49814 RepID=C6XKA2_HIRBI Length = 166 Score = 73.5 bits (180), Expect = 2e-12, Method: Composition-based stats. Identities = 21/68 (30%), Positives = 37/68 (54%), Gaps = 2/68 (2%) Query: 5 MTGLVKWFNADKGFGFITPDDG--SKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGP 62 ++G VKWF++ KGFGFI PDDG ++ +H + ++ + E + + + +RG Sbjct: 18 ISGRVKWFDSVKGFGFIIPDDGLDGQEALLHISILREFGVEQVVEGMLISCDVVKRERGY 77 Query: 63 AAANVVTL 70 V +L Sbjct: 78 QVTEVKSL 85 Score = 60.8 bits (147), Expect = 1e-08, Method: Composition-based stats. Identities = 18/60 (30%), Positives = 31/60 (51%) Query: 2 SNKMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRG 61 + + L+KWFN KG+GF+ +D+F+H ++ QKV +I +G +G Sbjct: 97 AEREAVLIKWFNRTKGYGFVHRVGEVEDIFLHMVTLRKAGLEEAEPGQKVWVTIGKGPKG 156 >UniRef50_D0WJT4 Cold-shock domain protein n=1 Tax=Actinomyces sp. oral taxon 848 str. F0332 RepID=D0WJT4_9ACTO Length = 141 Score = 73.5 bits (180), Expect = 2e-12, Method: Composition-based stats. Identities = 26/64 (40%), Positives = 36/64 (56%), Gaps = 3/64 (4%) Query: 6 TGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPAAA 65 TG VK+F+ KGFGFI DDG++ VF +A+ + +VEFS+ +RGP A Sbjct: 20 TGRVKFFDEKKGFGFIAGDDGTE-VFFSGSALPVGSR--VKAGTRVEFSVADTRRGPQAL 76 Query: 66 NVVT 69 V Sbjct: 77 TVAP 80 Searching..................................................done Results from round 3 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_Q88P68 Cold-shock domain family protein n=52 Tax=Bacter... 107 2e-22 UniRef50_Q7NT55 Cold shock transcription regulator protein n=1 T... 105 6e-22 UniRef50_P58726 Cold shock-like protein cspJ n=322 Tax=cellular ... 104 1e-21 UniRef50_Q4KEW6 Cold shock protein capa n=14 Tax=Bacteria RepID=... 104 1e-21 UniRef50_A3BPB0 Putative uncharacterized protein n=4 Tax=Oryza s... 102 4e-21 UniRef50_D1IX09 Whole genome shotgun sequence of line PN40024, s... 100 2e-20 UniRef50_Q08VT0 Conserved domain protein n=3 Tax=Bacteria RepID=... 99 3e-20 UniRef50_P0A363 Cold shock-like protein cspB n=58 Tax=Enterobact... 99 3e-20 UniRef50_P36995 Cold shock-like protein cspB n=24 Tax=Bacteria R... 99 4e-20 UniRef50_B3PL56 Cold-shock protein CspD n=34 Tax=Bacteria RepID=... 99 5e-20 UniRef50_P0A974 Cold shock-like protein cspE n=233 Tax=Gammaprot... 99 5e-20 UniRef50_B5Y9M2 Conserved domain protein n=20 Tax=Bacteria RepID... 99 5e-20 UniRef50_A4G7K9 Cold shock protein CspD n=3 Tax=Bacteria RepID=A... 99 6e-20 UniRef50_Q0JY13 Cold shock protein, DNA-binding n=2 Tax=Burkhold... 98 6e-20 UniRef50_A9IR63 Cold shock-like protein n=13 Tax=cellular organi... 98 8e-20 UniRef50_C9Y043 Cold shock-like protein cspD n=3 Tax=Enterobacte... 98 1e-19 UniRef50_O30875 Major cold shock protein n=98 Tax=cellular organ... 97 1e-19 UniRef50_A4VNB0 Cold-shock DNA-binding protein n=75 Tax=Bacteria... 97 2e-19 UniRef50_A2SIM9 Cold-shock DNA-binding protein family n=16 Tax=P... 97 2e-19 UniRef50_A5BWB0 Putative uncharacterized protein n=1 Tax=Vitis v... 96 3e-19 UniRef50_C7Q9X4 Cold-shock DNA-binding domain protein n=31 Tax=B... 96 3e-19 UniRef50_P0A9Y8 Cold shock-like protein cspC n=125 Tax=Enterobac... 96 4e-19 UniRef50_Q1DBV4 Cold-shock protein CspA n=10 Tax=cellular organi... 95 8e-19 UniRef50_A4VMZ2 Cold shock protein CspA n=2 Tax=Gammaproteobacte... 94 1e-18 UniRef50_A8QHS7 'Cold-shock' DNA-binding domain containing prote... 94 1e-18 UniRef50_A4VLV8 Cold-shock protein CspD n=5 Tax=Gammaproteobacte... 94 1e-18 UniRef50_A1JMC2 Cold shock-like protein cspD (Cold shock-like pr... 94 2e-18 UniRef50_UPI000194E5B1 PREDICTED: Rous sarcoma virus transcripti... 94 2e-18 UniRef50_Q90650 Rous sarcoma virus transcription enhancer factor... 94 2e-18 UniRef50_A1U3R2 Cold-shock DNA-binding protein family n=3 Tax=Ma... 94 2e-18 UniRef50_C4WXL4 ACYPI009849 protein n=3 Tax=cellular organisms R... 94 2e-18 UniRef50_A3Y9L0 Cold-shock DNA-binding domain protein n=2 Tax=Ma... 93 2e-18 UniRef50_B7PM92 PIN domain-containing RNA-binding protein, putat... 93 2e-18 UniRef50_B0KQL2 Cold-shock DNA-binding domain protein n=2 Tax=Ga... 93 3e-18 UniRef50_P16989 DNA-binding protein A n=144 Tax=cellular organis... 92 3e-18 UniRef50_A1S709 Cold-shock DNA-binding protein family n=6 Tax=ce... 92 4e-18 UniRef50_B7C7U1 Putative uncharacterized protein n=1 Tax=Eubacte... 92 4e-18 UniRef50_A4RZ32 Predicted protein n=1 Tax=Ostreococcus lucimarin... 92 5e-18 UniRef50_B4S1R6 Stress response protein CspD n=5 Tax=cellular or... 91 9e-18 UniRef50_P27484 Glycine-rich protein 2 n=5 Tax=Viridiplantae Rep... 91 9e-18 UniRef50_Q03A67 Cold-shock DNA-binding protein family n=16 Tax=F... 91 9e-18 UniRef50_A4A3Y7 Cold-shock domain family protein n=2 Tax=unclass... 91 9e-18 UniRef50_P62171 Cold shock-like protein cspC n=85 Tax=Bacteria R... 91 1e-17 UniRef50_Q4FT63 Cold-shock DNA-binding protein family n=10 Tax=c... 91 1e-17 UniRef50_B5X2B2 Y-box-binding protein 2-A n=1 Tax=Salmo salar Re... 91 1e-17 UniRef50_Q2P2A6 Major cold shock protein n=21 Tax=Gammaproteobac... 91 1e-17 UniRef50_C4Z3Q0 Cold shock protein (Beta-ribbon, CspA family) n=... 91 1e-17 UniRef50_B3RZU4 Putative uncharacterized protein n=1 Tax=Trichop... 91 2e-17 UniRef50_Q30QF0 Cold-shock DNA-binding protein family n=12 Tax=P... 90 2e-17 UniRef50_Q1LCU6 Cold-shock DNA-binding protein family n=7 Tax=Pr... 90 2e-17 UniRef50_Q81DK5 Cold shock-like protein cspE n=713 Tax=Bacteria ... 90 2e-17 UniRef50_O65639 Glycine-rich protein n=10 Tax=cellular organisms... 90 2e-17 UniRef50_Q2LQ45 Cold shock protein n=49 Tax=Bacteria RepID=Q2LQ4... 90 3e-17 UniRef50_B5HGK4 Cold shock protein n=10 Tax=Streptomyces RepID=B... 89 3e-17 UniRef50_P54584 Cold shock protein n=9 Tax=Bacteria RepID=CSP_ARTGO 89 3e-17 UniRef50_P0A356 Cold shock-like protein cspLA n=163 Tax=root Rep... 89 3e-17 UniRef50_B8C1C4 Cold-shock DNA-binding domain-containing protein... 89 3e-17 UniRef50_UPI000155BE86 PREDICTED: hypothetical protein, partial ... 89 3e-17 UniRef50_Q5HPE0 Cold shock protein cspA n=113 Tax=Bacteria RepID... 89 3e-17 UniRef50_A0NEN6 AGAP006108-PA n=4 Tax=Culicimorpha RepID=A0NEN6_... 89 3e-17 UniRef50_O46173 Y-box protein n=14 Tax=cellular organisms RepID=... 89 4e-17 UniRef50_P0A970 Cold shock-like protein cspD n=101 Tax=Gammaprot... 89 4e-17 UniRef50_P95459 Major cold shock protein cspA n=33 Tax=cellular ... 89 4e-17 UniRef50_Q9Y2T7 Y-box-binding protein 2 n=21 Tax=Tetrapoda RepID... 89 5e-17 UniRef50_Q2LY24 Cold shock protein n=11 Tax=Bacteria RepID=Q2LY2... 89 5e-17 UniRef50_Q01761 Cold shock-like protein 7.0 n=356 Tax=cellular o... 89 5e-17 UniRef50_O13015 Y box protein 2 n=4 Tax=Clupeocephala RepID=O130... 89 5e-17 UniRef50_Q816H3 Cold shock-like protein cspD n=370 Tax=Bacteria ... 89 5e-17 UniRef50_P71478 Cold shock protein 1 n=20 Tax=Firmicutes RepID=C... 89 6e-17 UniRef50_B5AU39 Y-box protein Lyb1 n=1 Tax=Lethenteron japonicum... 88 6e-17 UniRef50_C6VN45 Cold shock protein CspC n=8 Tax=Firmicutes RepID... 88 6e-17 UniRef50_B7RWZ3 'Cold-shock' DNA-binding domain protein n=1 Tax=... 88 6e-17 UniRef50_Q9VRN5 Protein lin-28 homolog n=1 Tax=Drosophila melano... 88 6e-17 UniRef50_D1C6U7 Cold-shock DNA-binding domain protein n=1 Tax=Sp... 88 7e-17 UniRef50_P72192 Temperature acclimation protein B (Fragment) n=8... 88 7e-17 UniRef50_UPI0001555D69 PREDICTED: similar to LD37574p, partial n... 88 7e-17 UniRef50_O67327 Cold shock-like protein n=2 Tax=Bacteria RepID=C... 88 7e-17 UniRef50_C4QN75 Y box binding protein, putative n=10 Tax=cellula... 88 8e-17 UniRef50_Q3AFQ5 Cold shock protein CspC n=14 Tax=Bacteria RepID=... 88 8e-17 UniRef50_Q90WH1 Cold-shock domain protein (Fragment) n=4 Tax=Per... 88 9e-17 UniRef50_D1H869 Whole genome shotgun sequence of line PN40024, s... 88 9e-17 UniRef50_Q4ZRK5 Cold-shock protein, DNA-binding n=10 Tax=Pseudom... 88 9e-17 UniRef50_C4QN73 Y box binding protein, putative n=4 Tax=Bilateri... 88 1e-16 UniRef50_C0QFU1 CspA n=4 Tax=cellular organisms RepID=C0QFU1_DESAH 87 1e-16 UniRef50_P41824 Y-box factor homolog n=1 Tax=Aplysia californica... 87 1e-16 UniRef50_A3XD40 Cold shock family protein n=5 Tax=Rhodobacterace... 87 1e-16 UniRef50_B4SCC3 Cold-shock DNA-binding domain protein n=4 Tax=ce... 87 2e-16 UniRef50_C9KNJ1 Conserved domain protein n=1 Tax=Mitsuokella mul... 87 2e-16 UniRef50_Q5CVY2 Cold shock RNA binding domain of the OB fold (Fr... 87 2e-16 UniRef50_Q3IC55 Cold shock protein n=52 Tax=Bacteria RepID=Q3IC5... 87 2e-16 UniRef50_O62213 Protein F33A8.3, confirmed by transcript evidenc... 87 2e-16 UniRef50_B5A4M3 Glycine-rich nucleic acid binding protein n=1 Ta... 87 2e-16 UniRef50_UPI00004F1407 PREDICTED: similar to CSDA protein n=1 Ta... 87 2e-16 UniRef50_UPI00017B0A95 UPI00017B0A95 related cluster n=1 Tax=Tet... 87 2e-16 UniRef50_B4U902 Cold-shock DNA-binding domain protein n=9 Tax=Ba... 87 2e-16 UniRef50_C4WSK9 ACYPI003867 protein n=1 Tax=Acyrthosiphon pisum ... 87 2e-16 UniRef50_D0MDE8 Cold-shock DNA-binding domain protein n=1 Tax=Rh... 86 3e-16 UniRef50_A5VRM7 Cold-shock family protein n=37 Tax=Brucellaceae ... 86 3e-16 UniRef50_B3QZU5 Cold shock-like protein n=1 Tax=Candidatus Phyto... 86 3e-16 UniRef50_UPI000051480C PREDICTED: similar to ypsilon schachtel C... 86 3e-16 UniRef50_O54310 Cold shock-like protein n=7 Tax=Bacteria RepID=C... 86 3e-16 UniRef50_A4XHY2 Cold-shock DNA-binding protein family n=3 Tax=ce... 86 4e-16 UniRef50_A8I8L3 Cold-shock DNA-binding domain n=1 Tax=Azorhizobi... 86 4e-16 UniRef50_UPI0000F32A39 PREDICTED: Bos taurus similar to transcri... 86 4e-16 UniRef50_C5RTX4 Cold-shock DNA-binding domain protein n=13 Tax=c... 86 4e-16 UniRef50_D0KX28 Cold-shock DNA-binding domain protein n=1 Tax=Ha... 86 4e-16 UniRef50_A1U1H2 Cold-shock DNA-binding protein family n=5 Tax=Ga... 86 5e-16 UniRef50_C8P136 Conserved domain protein n=6 Tax=Bacteria RepID=... 86 5e-16 UniRef50_B0S1I2 Cold shock protein n=4 Tax=cellular organisms Re... 86 5e-16 UniRef50_C1F531 Cold shock protein n=1 Tax=Acidobacterium capsul... 85 5e-16 UniRef50_B9F7B8 Putative uncharacterized protein n=1 Tax=Oryza s... 85 5e-16 UniRef50_B0UEI2 Cold-shock DNA-binding domain protein n=11 Tax=A... 85 7e-16 UniRef50_D0MCR5 Cold-shock DNA-binding domain protein n=1 Tax=Rh... 85 8e-16 UniRef50_A9W6T1 Cold-shock protein DNA-binding n=32 Tax=Bacteria... 84 1e-15 UniRef50_Q9AN51 Blr1947 protein n=2 Tax=Bradyrhizobium japonicum... 84 1e-15 UniRef50_Q0SKK0 Cold shock protein n=1 Tax=Rhodococcus jostii RH... 84 1e-15 UniRef50_Q11GE9 Cold-shock DNA-binding protein family n=10 Tax=A... 84 1e-15 UniRef50_Q1YTJ3 Cold shock protein n=1 Tax=gamma proteobacterium... 84 1e-15 UniRef50_A3YG84 Cold-shock protein CspD n=2 Tax=Marinomonas RepI... 84 1e-15 UniRef50_Q1RLA8 Zinc finger protein n=1 Tax=Ciona intestinalis R... 84 1e-15 UniRef50_Q38896 Glycine-rich protein 2b n=125 Tax=cellular organ... 84 2e-15 UniRef50_B8KR01 'Cold-shock' DNA-binding domain protein n=1 Tax=... 84 2e-15 UniRef50_D0LU49 Cold-shock DNA-binding domain protein n=1 Tax=Ha... 83 2e-15 UniRef50_D2QP83 Cold-shock DNA-binding domain protein n=5 Tax=Ba... 83 3e-15 UniRef50_Q2S0T4 Conserved domain protein n=2 Tax=Bacteria RepID=... 83 3e-15 UniRef50_A7HXE8 Putative cold-shock DNA-binding domain protein n... 82 4e-15 UniRef50_Q47TE2 Cold-shock DNA-binding protein family n=9 Tax=Ac... 82 4e-15 UniRef50_A5N624 CspA n=10 Tax=cellular organisms RepID=A5N624_CLOK5 82 4e-15 UniRef50_B4RGZ9 Cold-shock DNA-binding domain protein n=75 Tax=B... 82 4e-15 UniRef50_C4FWF1 Putative uncharacterized protein n=1 Tax=Catonel... 82 4e-15 UniRef50_Q1J0P4 Cold-shock DNA-binding domain protein n=9 Tax=Ba... 82 5e-15 UniRef50_D1A5P8 Cold-shock DNA-binding domain protein n=33 Tax=A... 82 5e-15 UniRef50_P55390 Probable cold shock protein y4cH n=110 Tax=Prote... 82 7e-15 UniRef50_Q0BPU3 Cold shock protein n=2 Tax=Alphaproteobacteria R... 81 8e-15 UniRef50_B3EP04 Cold-shock DNA-binding domain protein n=13 Tax=C... 81 1e-14 UniRef50_C8WCQ1 Cold-shock DNA-binding domain protein n=18 Tax=A... 81 1e-14 UniRef50_Q9Z3S6 Cold shock protein cspA n=72 Tax=Bacteria RepID=... 81 1e-14 UniRef50_A8ILK3 Cold shock protein n=9 Tax=Proteobacteria RepID=... 81 1e-14 UniRef50_P46449 Cold shock-like protein cspD n=53 Tax=Bacteria R... 81 1e-14 UniRef50_Q1NG42 Cold shock protein n=3 Tax=Alphaproteobacteria R... 81 1e-14 UniRef50_D1BKC9 Cold shock domain protein CspD n=31 Tax=Bacteria... 81 1e-14 UniRef50_Q5YVF2 Putative cold shock protein n=1 Tax=Nocardia far... 81 1e-14 UniRef50_Q5JKD6 Cold shock domain protein 2-like protein n=1 Tax... 81 1e-14 UniRef50_Q23960 Y-box protein n=1 Tax=Dugesia japonica RepID=Q23... 81 2e-14 UniRef50_Q2S3Y3 'Cold-shock' DNA-binding domain, putative n=1 Ta... 80 2e-14 UniRef50_P92186 Protein lin-28 n=5 Tax=Caenorhabditis RepID=LIN2... 80 2e-14 UniRef50_D1AYL8 Cold-shock DNA-binding domain protein n=3 Tax=ce... 80 2e-14 UniRef50_A5VRP5 Cold-shock family protein n=37 Tax=Brucellaceae ... 80 2e-14 UniRef50_Q4H2L8 Y-box protein 1/2/3 n=2 Tax=Ciona intestinalis R... 80 2e-14 UniRef50_C1E859 Cold-shock protein with RNA binding domain n=2 T... 79 3e-14 UniRef50_A5V9E9 Cold-shock DNA-binding protein family n=2 Tax=ce... 79 3e-14 UniRef50_B6IXJ6 Cold shock-like protein CspA n=1 Tax=Rhodospiril... 79 3e-14 UniRef50_P91306 Y-box protein 2 n=6 Tax=Caenorhabditis RepID=P91... 79 4e-14 UniRef50_B6QZ94 Cold-shock DNA-binding domain protein n=1 Tax=Ps... 79 4e-14 UniRef50_B1MZK9 Cold shock protein n=15 Tax=Bacteria RepID=B1MZK... 79 5e-14 UniRef50_B1Z823 Cold-shock DNA-binding domain protein n=34 Tax=A... 79 5e-14 UniRef50_A8PLB9 'Cold-shock' DNA-binding domain containing prote... 79 6e-14 UniRef50_A3VSH0 Cold shock protein n=1 Tax=Parvularcula bermuden... 78 7e-14 UniRef50_A3YF52 Cold-shock protein, DNA-binding n=2 Tax=Marinomo... 78 7e-14 UniRef50_A4TN10 Cold-shock DNA-binding protein family n=35 Tax=E... 78 7e-14 UniRef50_B9JZ17 Cold shock protein n=106 Tax=Alphaproteobacteria... 78 8e-14 UniRef50_B9T6D3 Cellular nucleic acid binding protein, putative ... 78 9e-14 UniRef50_Q4SGH3 Chromosome undetermined SCAF14594, whole genome ... 78 1e-13 UniRef50_Q475L4 Cold-shock DNA-binding protein family n=1 Tax=Ra... 78 1e-13 UniRef50_A0Z255 Cold shock protein, CspA family-like protein n=1... 78 1e-13 UniRef50_B3DPK3 Cold shock protein n=7 Tax=Bifidobacterium RepID... 78 1e-13 UniRef50_B9MXF4 Predicted protein n=2 Tax=Populus trichocarpa Re... 77 1e-13 UniRef50_A0ACJ4 Putative DNA-binding protein n=2 Tax=Streptomyce... 77 1e-13 UniRef50_Q6ZN17 Protein lin-28 homolog B n=13 Tax=Tetrapoda RepI... 77 1e-13 UniRef50_UPI0000589074 PREDICTED: similar to ENSANGP00000011455 ... 77 1e-13 UniRef50_Q4UBG6 Cold shock protein, putative n=2 Tax=Theileria R... 77 2e-13 UniRef50_Q2W0B3 Cold shock protein n=3 Tax=Magnetospirillum RepI... 77 2e-13 UniRef50_A4FKV9 Putative DNA-binding protein n=1 Tax=Saccharopol... 77 2e-13 UniRef50_B9KKC8 Cold-shock DNA-binding protein family n=21 Tax=R... 76 3e-13 UniRef50_Q1RHK6 Cold shock-like protein cspA n=15 Tax=Rickettsia... 76 3e-13 UniRef50_A9AXX4 Cold-shock DNA-binding domain protein n=1 Tax=He... 76 3e-13 UniRef50_Q1AWL7 Cold-shock DNA-binding protein family n=2 Tax=ce... 76 4e-13 UniRef50_Q9EZJ7 Cold shock-like protein CspE (Fragment) n=1 Tax=... 75 4e-13 UniRef50_Q0VN88 Cold-shock domain family protein n=2 Tax=Alcaniv... 75 4e-13 UniRef50_B0T8T3 Cold-shock DNA-binding domain protein n=40 Tax=B... 75 4e-13 UniRef50_C8SGB1 Cold-shock DNA-binding domain protein n=4 Tax=Me... 75 5e-13 UniRef50_Q607Y7 Cold-shock DNA-binding domain protein n=1 Tax=Me... 75 5e-13 UniRef50_B4SFC0 Cold-shock DNA-binding domain protein n=1 Tax=Pe... 75 7e-13 UniRef50_A4V6J7 Y-Box factor protein (Fragment) n=1 Tax=Dugesia ... 75 7e-13 UniRef50_B0VIQ0 Cold-shock domain family protein n=2 Tax=Bacteri... 75 7e-13 UniRef50_A7BYF1 Putative uncharacterized protein n=1 Tax=Beggiat... 75 8e-13 UniRef50_Q127M7 Cold-shock DNA-binding protein family n=2 Tax=Be... 75 9e-13 UniRef50_D2H5S2 Putative uncharacterized protein (Fragment) n=2 ... 74 9e-13 UniRef50_B6KPP5 Glycine-rich protein 2, putative n=3 Tax=Toxopla... 74 1e-12 UniRef50_B2IBA0 Cold-shock DNA-binding domain protein n=2 Tax=Rh... 74 1e-12 UniRef50_Q803L0 Protein lin-28 homolog A n=13 Tax=Euteleostomi R... 74 1e-12 UniRef50_C0CRT9 Putative uncharacterized protein n=1 Tax=Blautia... 74 1e-12 UniRef50_D1S746 Cold-shock DNA-binding domain protein n=1 Tax=Mi... 74 1e-12 UniRef50_Q2NK56 Cold shock protein n=6 Tax=Bacteria RepID=Q2NK56... 74 1e-12 UniRef50_C4RFH3 DNA binding protein n=1 Tax=Micromonospora sp. A... 74 1e-12 UniRef50_Q1QLF4 Cold-shock DNA-binding protein family n=1 Tax=Ni... 74 2e-12 UniRef50_Q2RZT3 Conserved domain protein n=2 Tax=Salinibacter ru... 74 2e-12 UniRef50_D1U4V2 Cold-shock DNA-binding domain protein n=1 Tax=De... 74 2e-12 UniRef50_A6W4V4 Putative cold-shock DNA-binding domain protein n... 73 2e-12 UniRef50_C2E292 Cold-shock protein n=9 Tax=Lactobacillus RepID=C... 73 2e-12 UniRef50_UPI0001B4CA82 DNA-binding protein n=1 Tax=Streptomyces ... 73 3e-12 UniRef50_C4K358 RNA chaperone, transcription antiterminator n=3 ... 73 3e-12 UniRef50_B4RAZ9 Cold-shock DNA-binding domain protein n=6 Tax=Ca... 73 3e-12 UniRef50_B7RPT8 Cold shock protein n=1 Tax=Roseobacter sp. GAI10... 73 3e-12 UniRef50_Q1GT29 Cold-shock DNA-binding protein family n=1 Tax=Sp... 73 3e-12 UniRef50_A0M1Q5 Cold shock-like protein n=13 Tax=Bacteria RepID=... 72 4e-12 UniRef50_Q9H9Z2 Protein lin-28 homolog A n=33 Tax=Euteleostomi R... 72 4e-12 UniRef50_A0R441 'Cold-shock' DNA-binding domain protein n=18 Tax... 72 4e-12 UniRef50_Q17JD9 Putative uncharacterized protein n=1 Tax=Aedes a... 72 4e-12 UniRef50_B9T6B7 Cold shock protein, putative n=1 Tax=Ricinus com... 72 4e-12 UniRef50_Q5Z0N3 Putative cold shock protein n=2 Tax=Bacteria Rep... 72 5e-12 UniRef50_A0PKZ5 Cold shock-like protein B CspB n=78 Tax=Actinomy... 72 5e-12 UniRef50_C9NB66 Cold-shock DNA-binding domain protein n=1 Tax=St... 72 6e-12 UniRef50_A1B0C7 Cold-shock DNA-binding protein family n=28 Tax=R... 72 6e-12 UniRef50_A2SHE7 Cold-shock DNA-binding domain n=2 Tax=Betaproteo... 72 6e-12 UniRef50_A6ESQ3 Cold shock protein n=2 Tax=Bacteroidetes RepID=A... 72 7e-12 UniRef50_A5VJ42 Cold-shock DNA-binding protein family n=10 Tax=L... 72 7e-12 UniRef50_B3QHW3 Cold-shock DNA-binding domain protein n=92 Tax=A... 72 7e-12 UniRef50_B0W4X1 Putative uncharacterized protein n=1 Tax=Culex q... 72 8e-12 UniRef50_Q6ALH9 Hypothetical cold-shock protein n=1 Tax=Desulfot... 72 8e-12 UniRef50_C7LWH7 Cold-shock DNA-binding domain protein n=2 Tax=Pr... 72 8e-12 UniRef50_Q016S2 Putative nucleic acid binding protein (ISS) n=1 ... 71 8e-12 UniRef50_A1TSW1 Cold-shock DNA-binding domain protein n=4 Tax=Ac... 71 9e-12 UniRef50_Q5P4M3 Probable cold shock family protein n=1 Tax=Aroma... 71 9e-12 UniRef50_A8NIV0 'Cold-shock' DNA-binding domain containing prote... 71 1e-11 UniRef50_A9ART0 Cold-shock DNA-binding domain protein n=1 Tax=Bu... 71 1e-11 UniRef50_A3J0H8 Cold shock protein n=2 Tax=Bacteroidetes RepID=A... 70 2e-11 UniRef50_A8M1B3 Cold-shock DNA-binding domain protein n=2 Tax=Sa... 70 2e-11 UniRef50_D1XSW6 Cold-shock DNA-binding domain protein n=3 Tax=St... 70 2e-11 UniRef50_A1VD07 Cold-shock DNA-binding protein family n=4 Tax=De... 70 2e-11 UniRef50_Q5YWN3 Putative cold shock protein n=1 Tax=Nocardia far... 70 2e-11 UniRef50_A4VQF2 Cold-shock DNA-binding domain protein n=12 Tax=B... 70 2e-11 UniRef50_B7G5B5 Predicted protein n=1 Tax=Phaeodactylum tricornu... 70 2e-11 UniRef50_C7PR46 Cold-shock DNA-binding domain protein n=1 Tax=Ch... 70 2e-11 UniRef50_Q7WXG5 Putative uncharacterized protein n=2 Tax=Cupriav... 70 2e-11 UniRef50_C0Z2E8 AT4G38680 protein n=103 Tax=cellular organisms R... 70 3e-11 UniRef50_Q042Q8 Cold-shock DNA-binding protein family n=18 Tax=L... 70 3e-11 UniRef50_UPI0001AF6C46 cold-shock DNA-binding protein family pro... 69 3e-11 UniRef50_D0LBW3 Cold-shock protein DNA-binding protein n=2 Tax=C... 69 4e-11 UniRef50_Q11SL0 Cold-shock DNA-binding protein family n=4 Tax=Ba... 69 4e-11 UniRef50_C7IHA3 Cold-shock DNA-binding domain protein n=1 Tax=Cl... 69 4e-11 UniRef50_Q2RNN9 Cold-shock DNA-binding protein family n=2 Tax=Rh... 69 5e-11 UniRef50_C6C161 Cold-shock DNA-binding domain protein n=1 Tax=De... 69 5e-11 UniRef50_Q12K82 Putative uncharacterized protein n=1 Tax=Shewane... 69 6e-11 UniRef50_D2QU65 Cold-shock DNA-binding domain protein n=23 Tax=B... 69 6e-11 UniRef50_D2RAW4 Cold-shock DNA-binding domain protein n=2 Tax=Bi... 69 6e-11 UniRef50_Q7NNC3 Gsr0488 protein n=1 Tax=Gloeobacter violaceus Re... 69 6e-11 UniRef50_B0T0Q8 Cold-shock DNA-binding domain protein n=2 Tax=Ca... 69 7e-11 UniRef50_C0WQD2 Possible cold-shock protein n=3 Tax=Lactobacillu... 68 7e-11 UniRef50_A4SJX6 Cold-shock protein, DNA-binding n=2 Tax=Aeromona... 68 7e-11 Sequences not found previously or not previously below threshold: >UniRef50_Q88P68 Cold-shock domain family protein n=52 Tax=Bacteria RepID=Q88P68_PSEPK Length = 165 Score = 107 bits (267), Expect = 2e-22, Method: Composition-based stats. Identities = 34/70 (48%), Positives = 46/70 (65%), Gaps = 1/70 (1%) Query: 1 MSNKMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQR 60 M+ + G VKWFN +KG+GFITP+ G +FVHF AI+ N F++L E Q+V F QGQ+ Sbjct: 97 MAERQKGTVKWFNDEKGYGFITPESGPD-LFVHFRAIEGNGFKSLKEGQQVTFEAVQGQK 155 Query: 61 GPAAANVVTL 70 G A V + Sbjct: 156 GMQADKVQPV 165 >UniRef50_Q7NT55 Cold shock transcription regulator protein n=1 Tax=Chromobacterium violaceum RepID=Q7NT55_CHRVO Length = 110 Score = 105 bits (262), Expect = 6e-22, Method: Composition-based stats. Identities = 36/69 (52%), Positives = 47/69 (68%) Query: 2 SNKMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRG 61 + TG VKWFN KGFGFITPD+G DVF HF+ I + FR+L ENQ+V F I +G +G Sbjct: 42 NKMATGTVKWFNDSKGFGFITPDEGGDDVFAHFSQINAKGFRSLAENQRVSFDIVEGPKG 101 Query: 62 PAAANVVTL 70 A+N+ + Sbjct: 102 KQASNIQPI 110 >UniRef50_P58726 Cold shock-like protein cspJ n=322 Tax=cellular organisms RepID=CSPJ_SALTI Length = 70 Score = 104 bits (260), Expect = 1e-21, Method: Composition-based stats. Identities = 56/70 (80%), Positives = 63/70 (90%) Query: 1 MSNKMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQR 60 M+ K+TGLVKWFN +KGFGFITP DGSKDVFVHF+AIQSNEFRTLNENQ+VEFS EQG + Sbjct: 1 MTTKITGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNEFRTLNENQEVEFSAEQGPK 60 Query: 61 GPAAANVVTL 70 GP+A NVV L Sbjct: 61 GPSAVNVVAL 70 >UniRef50_Q4KEW6 Cold shock protein capa n=14 Tax=Bacteria RepID=Q4KEW6_PSEF5 Length = 91 Score = 104 bits (259), Expect = 1e-21, Method: Composition-based stats. Identities = 40/69 (57%), Positives = 49/69 (71%) Query: 1 MSNKMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQR 60 MSN+ TG VKWFN +KGFGFITP G D+FVHF AI+S+ F++L E Q V F E+GQ+ Sbjct: 22 MSNRQTGTVKWFNDEKGFGFITPQGGGDDLFVHFKAIESDGFKSLKEGQTVSFVAEKGQK 81 Query: 61 GPAAANVVT 69 G AA V Sbjct: 82 GMQAAQVRP 90 >UniRef50_A3BPB0 Putative uncharacterized protein n=4 Tax=Oryza sativa RepID=A3BPB0_ORYSJ Length = 238 Score = 102 bits (254), Expect = 4e-21, Method: Composition-based stats. Identities = 35/69 (50%), Positives = 49/69 (71%), Gaps = 1/69 (1%) Query: 2 SNKMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRG 61 S ++ G VKWF+A KGFGFITPDDG +D+FVH ++++S+ +R+LN+ VEFS+ G G Sbjct: 3 SERVKGTVKWFDATKGFGFITPDDGGEDLFVHQSSLKSDGYRSLNDGDVVEFSVGSGNDG 62 Query: 62 P-AAANVVT 69 A NV Sbjct: 63 RTKAVNVTA 71 >UniRef50_D1IX09 Whole genome shotgun sequence of line PN40024, scaffold_38.assembly12x (Fragment) n=1 Tax=Vitis vinifera RepID=D1IX09_VITVI Length = 236 Score = 100 bits (249), Expect = 2e-20, Method: Composition-based stats. Identities = 35/67 (52%), Positives = 46/67 (68%), Gaps = 1/67 (1%) Query: 3 NKMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGP 62 +++TG VKWFN KGFGFITPDDG D+FVH ++I+S FR+L E + VEF +E G Sbjct: 2 SRVTGTVKWFNDQKGFGFITPDDGGDDLFVHQSSIRSEGFRSLGEGEAVEFVVESSDDGR 61 Query: 63 -AAANVV 68 A +V Sbjct: 62 TKAVDVT 68 >UniRef50_Q08VT0 Conserved domain protein n=3 Tax=Bacteria RepID=Q08VT0_STIAU Length = 100 Score = 99.4 bits (247), Expect = 3e-20, Method: Composition-based stats. Identities = 38/67 (56%), Positives = 44/67 (65%) Query: 3 NKMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGP 62 N TG VKWFN KGFGFIT D G +DVF H TAI + FRTL E QKV+F + +G +G Sbjct: 33 NMATGTVKWFNDAKGFGFITQDGGGEDVFCHHTAINMDGFRTLQEGQKVQFDVARGPKGL 92 Query: 63 AAANVVT 69 A NV Sbjct: 93 QAQNVRA 99 >UniRef50_P0A363 Cold shock-like protein cspB n=58 Tax=Enterobacteriaceae RepID=CSPB_YEREN Length = 70 Score = 99.4 bits (247), Expect = 3e-20, Method: Composition-based stats. Identities = 54/70 (77%), Positives = 63/70 (90%) Query: 1 MSNKMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQR 60 MSNKMTGLVKWF+A KGFGFI+P DGSKDVFVHF+AIQ N+++TL+E Q VEFSIEQGQ+ Sbjct: 1 MSNKMTGLVKWFDAGKGFGFISPADGSKDVFVHFSAIQGNDYKTLDEGQNVEFSIEQGQK 60 Query: 61 GPAAANVVTL 70 GP+A NVV L Sbjct: 61 GPSAVNVVAL 70 >UniRef50_P36995 Cold shock-like protein cspB n=24 Tax=Bacteria RepID=CSPB_ECOLI Length = 71 Score = 99.0 bits (246), Expect = 4e-20, Method: Composition-based stats. Identities = 54/69 (78%), Positives = 61/69 (88%) Query: 1 MSNKMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQR 60 MSNKMTGLVKWFNADKGFGFI+P DGSKDVFVHF+AIQ++ +RTL E QKV FSIE G + Sbjct: 1 MSNKMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAK 60 Query: 61 GPAAANVVT 69 GPAAANV+ Sbjct: 61 GPAAANVII 69 >UniRef50_B3PL56 Cold-shock protein CspD n=34 Tax=Bacteria RepID=B3PL56_CELJU Length = 125 Score = 99.0 bits (246), Expect = 5e-20, Method: Composition-based stats. Identities = 30/64 (46%), Positives = 43/64 (67%) Query: 6 TGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPAAA 65 TG VKWFN KG+GFI D+G +D+F H++AI + ++TL Q+V F I +G +G A Sbjct: 44 TGTVKWFNNAKGYGFILADEGGEDLFAHYSAISMDGYKTLKAGQQVSFEITRGDKGLHAI 103 Query: 66 NVVT 69 N+V Sbjct: 104 NIVA 107 >UniRef50_P0A974 Cold shock-like protein cspE n=233 Tax=Gammaproteobacteria RepID=CSPE_ECO57 Length = 69 Score = 99.0 bits (246), Expect = 5e-20, Method: Composition-based stats. Identities = 46/68 (67%), Positives = 56/68 (82%) Query: 3 NKMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGP 62 +K+ G VKWFN KGFGFITP+DGSKDVFVHF+AIQ+N F+TL E Q+VEF I G +GP Sbjct: 2 SKIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGP 61 Query: 63 AAANVVTL 70 +AANV+ L Sbjct: 62 SAANVIAL 69 >UniRef50_B5Y9M2 Conserved domain protein n=20 Tax=Bacteria RepID=B5Y9M2_COPPD Length = 89 Score = 99.0 bits (246), Expect = 5e-20, Method: Composition-based stats. Identities = 39/68 (57%), Positives = 49/68 (72%) Query: 2 SNKMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRG 61 + TG VKWF+A KG+GFIT DDG DVFVHF+AI+ N F++L++ KVEF I G +G Sbjct: 21 TKMYTGTVKWFDAKKGYGFITRDDGEGDVFVHFSAIEGNGFKSLDQGDKVEFEIVNGPKG 80 Query: 62 PAAANVVT 69 P AA VV Sbjct: 81 PQAAKVVK 88 >UniRef50_A4G7K9 Cold shock protein CspD n=3 Tax=Bacteria RepID=A4G7K9_HERAR Length = 67 Score = 98.6 bits (245), Expect = 6e-20, Method: Composition-based stats. Identities = 36/65 (55%), Positives = 44/65 (67%) Query: 4 KMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPA 63 TG VKWFN KGFGFITPD G +D+F HF+AI F+TL E QKV F + QG +G Sbjct: 1 MQTGTVKWFNDSKGFGFITPDSGGEDLFAHFSAITMEGFKTLKEGQKVSFEVTQGPKGKQ 60 Query: 64 AANVV 68 A+N+ Sbjct: 61 ASNIK 65 >UniRef50_Q0JY13 Cold shock protein, DNA-binding n=2 Tax=Burkholderiaceae RepID=Q0JY13_RALEH Length = 98 Score = 98.2 bits (244), Expect = 6e-20, Method: Composition-based stats. Identities = 34/67 (50%), Positives = 48/67 (71%) Query: 4 KMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPA 63 TG+VKWFN KGFGFI PD G D+F HF+ I+++ F++L ENQ+V+F ++ G +G Sbjct: 18 MQTGIVKWFNDAKGFGFIKPDAGGDDLFAHFSEIRADGFKSLQENQRVQFEVKNGPKGLQ 77 Query: 64 AANVVTL 70 AAN+ L Sbjct: 78 AANITPL 84 >UniRef50_A9IR63 Cold shock-like protein n=13 Tax=cellular organisms RepID=A9IR63_BORPD Length = 68 Score = 98.2 bits (244), Expect = 8e-20, Method: Composition-based stats. Identities = 37/66 (56%), Positives = 51/66 (77%) Query: 4 KMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPA 63 TG+VKWFNA+KG+GFITPDDGSKD+F H++ I S +++L ENQ+V F + QG +GP+ Sbjct: 1 MATGIVKWFNAEKGYGFITPDDGSKDLFAHYSEISSEGYKSLQENQRVTFEVGQGPKGPS 60 Query: 64 AANVVT 69 A N+ Sbjct: 61 AKNIKV 66 >UniRef50_C9Y043 Cold shock-like protein cspD n=3 Tax=Enterobacteriaceae RepID=C9Y043_CROTZ Length = 99 Score = 97.8 bits (243), Expect = 1e-19, Method: Composition-based stats. Identities = 32/70 (45%), Positives = 44/70 (62%) Query: 1 MSNKMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQR 60 + TG VKWFN KGFGFI P+ G +D+F H++ IQ + +RTL Q V F + QG + Sbjct: 21 CRSMETGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQVVRFDVHQGPK 80 Query: 61 GPAAANVVTL 70 G A+ +V L Sbjct: 81 GNHASVIVPL 90 >UniRef50_O30875 Major cold shock protein n=98 Tax=cellular organisms RepID=CSPA_MICLC Length = 67 Score = 97.5 bits (242), Expect = 1e-19, Method: Composition-based stats. Identities = 39/64 (60%), Positives = 47/64 (73%) Query: 7 GLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPAAAN 66 G VKWFNA+KG+GFI P+D S DVFVHF+AIQ N F+ L EN +VEF + G +G AAN Sbjct: 4 GTVKWFNAEKGYGFIAPEDNSADVFVHFSAIQGNGFKELQENDRVEFETQDGPKGLQAAN 63 Query: 67 VVTL 70 V L Sbjct: 64 VTKL 67 >UniRef50_A4VNB0 Cold-shock DNA-binding protein n=75 Tax=Bacteria RepID=A4VNB0_PSEU5 Length = 243 Score = 97.1 bits (241), Expect = 2e-19, Method: Composition-based stats. Identities = 34/69 (49%), Positives = 43/69 (62%), Gaps = 1/69 (1%) Query: 2 SNKMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRG 61 + + G VKWFN KGFGFI+ D G DVFVHF AI+ R L E Q+VEF+I +G Sbjct: 172 AGREAGTVKWFNTSKGFGFISRDSG-DDVFVHFRAIRGEGHRILVEGQRVEFTIMMRDKG 230 Query: 62 PAAANVVTL 70 A +VV + Sbjct: 231 LQAEDVVPV 239 >UniRef50_A2SIM9 Cold-shock DNA-binding protein family n=16 Tax=Proteobacteria RepID=A2SIM9_METPP Length = 89 Score = 96.7 bits (240), Expect = 2e-19, Method: Composition-based stats. Identities = 32/67 (47%), Positives = 42/67 (62%) Query: 4 KMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPA 63 + G VKWFN KGFGFI P+ G +DVF HF+AI + FRTL + +V F + G +G Sbjct: 1 MVNGTVKWFNDAKGFGFIEPEGGGEDVFAHFSAILMDGFRTLKQGARVSFELVDGPKGKL 60 Query: 64 AANVVTL 70 A N+ L Sbjct: 61 AQNIAPL 67 >UniRef50_A5BWB0 Putative uncharacterized protein n=1 Tax=Vitis vinifera RepID=A5BWB0_VITVI Length = 189 Score = 96.3 bits (239), Expect = 3e-19, Method: Composition-based stats. Identities = 36/70 (51%), Positives = 50/70 (71%), Gaps = 1/70 (1%) Query: 2 SNKMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRG 61 S + TG VKWF+ KGFGFI PDDG +D+FVH T+I+S+ FRTL+E + VEF+++ G+ G Sbjct: 4 SKRSTGTVKWFSGQKGFGFIAPDDGGEDLFVHQTSIRSDGFRTLSEGETVEFAVDHGEDG 63 Query: 62 P-AAANVVTL 70 A V + Sbjct: 64 RTKAVEVTAV 73 >UniRef50_C7Q9X4 Cold-shock DNA-binding domain protein n=31 Tax=Bacteria RepID=C7Q9X4_CATAD Length = 68 Score = 95.9 bits (238), Expect = 3e-19, Method: Composition-based stats. Identities = 35/63 (55%), Positives = 44/63 (69%) Query: 7 GLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPAAAN 66 G VKWFNA+KGFGFI D G DVF HF+ I ++ +R L E Q+V F + QGQ+GP A N Sbjct: 4 GTVKWFNAEKGFGFIEQDGGGADVFAHFSNIAADGYRELQEGQRVSFEVTQGQKGPQAVN 63 Query: 67 VVT 69 +V Sbjct: 64 IVP 66 >UniRef50_P0A9Y8 Cold shock-like protein cspC n=125 Tax=Enterobacteriaceae RepID=CSPC_ECO57 Length = 69 Score = 95.9 bits (238), Expect = 4e-19, Method: Composition-based stats. Identities = 46/67 (68%), Positives = 52/67 (77%) Query: 4 KMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPA 63 K+ G VKWFN KGFGFITP DGSKDVFVHF+AIQ N F+TL E Q VEF I+ GQ+GPA Sbjct: 3 KIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPA 62 Query: 64 AANVVTL 70 A NV + Sbjct: 63 AVNVTAI 69 >UniRef50_Q1DBV4 Cold-shock protein CspA n=10 Tax=cellular organisms RepID=Q1DBV4_MYXXD Length = 68 Score = 94.8 bits (235), Expect = 8e-19, Method: Composition-based stats. Identities = 39/67 (58%), Positives = 44/67 (65%) Query: 4 KMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPA 63 TG VKWFN KGFGFI DDG DVF H TAIQ++ FRTL E QKVEF +G +G Sbjct: 1 MATGTVKWFNDAKGFGFIAQDDGGADVFCHHTAIQTDGFRTLAEGQKVEFETRKGPKGLQ 60 Query: 64 AANVVTL 70 A NV + Sbjct: 61 AENVRVV 67 >UniRef50_A4VMZ2 Cold shock protein CspA n=2 Tax=Gammaproteobacteria RepID=A4VMZ2_PSEU5 Length = 136 Score = 94.4 bits (234), Expect = 1e-18, Method: Composition-based stats. Identities = 35/70 (50%), Positives = 46/70 (65%), Gaps = 1/70 (1%) Query: 1 MSNKMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQR 60 M+ + TG VKWFN KG+GFI DVFVH+ AI+ + R+L E Q+VEFS+ QGQ+ Sbjct: 68 MAERETGTVKWFNDAKGYGFIQR-GNGADVFVHYRAIRGDGHRSLAEGQQVEFSVIQGQK 126 Query: 61 GPAAANVVTL 70 G A +V L Sbjct: 127 GLQAEDVAGL 136 >UniRef50_A8QHS7 'Cold-shock' DNA-binding domain containing protein n=4 Tax=cellular organisms RepID=A8QHS7_BRUMA Length = 290 Score = 94.4 bits (234), Expect = 1e-18, Method: Composition-based stats. Identities = 32/72 (44%), Positives = 44/72 (61%), Gaps = 4/72 (5%) Query: 1 MSNKMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEF----RTLNENQKVEFSIE 56 ++ + G VKWFN G+GFI D D+FVH TA+ N R+L + +KVEF + Sbjct: 54 VARHIQGTVKWFNVKNGYGFINRADTGDDIFVHQTAVTKNNPNKYLRSLGDGEKVEFDVV 113 Query: 57 QGQRGPAAANVV 68 +GQ+GP AANV Sbjct: 114 EGQKGPEAANVT 125 >UniRef50_A4VLV8 Cold-shock protein CspD n=5 Tax=Gammaproteobacteria RepID=A4VLV8_PSEU5 Length = 93 Score = 94.0 bits (233), Expect = 1e-18, Method: Composition-based stats. Identities = 30/68 (44%), Positives = 44/68 (64%) Query: 2 SNKMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRG 61 ++ ++G VKWFN KG+GFI D G +D+F H++AIQ +RTL Q V F+I QG +G Sbjct: 5 NSMLSGKVKWFNNAKGYGFIVADGGDEDLFAHYSAIQMEGYRTLKAGQAVMFNILQGPKG 64 Query: 62 PAAANVVT 69 A ++ Sbjct: 65 LHATDIRP 72 >UniRef50_A1JMC2 Cold shock-like protein cspD (Cold shock-like protein) n=19 Tax=Bacteria RepID=A1JMC2_YERE8 Length = 85 Score = 93.6 bits (232), Expect = 2e-18, Method: Composition-based stats. Identities = 32/65 (49%), Positives = 43/65 (66%) Query: 6 TGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPAAA 65 TG VKWFN KGFGFI P+ G +D+F H++ IQ + +RTL Q V F + QG +G A+ Sbjct: 3 TGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQMVNFDVHQGPKGNHAS 62 Query: 66 NVVTL 70 +V L Sbjct: 63 LIVPL 67 >UniRef50_UPI000194E5B1 PREDICTED: Rous sarcoma virus transcription enhancer factor II n=1 Tax=Taeniopygia guttata RepID=UPI000194E5B1 Length = 420 Score = 93.6 bits (232), Expect = 2e-18, Method: Composition-based stats. Identities = 31/70 (44%), Positives = 44/70 (62%), Gaps = 4/70 (5%) Query: 3 NKMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEF----RTLNENQKVEFSIEQG 58 K+ G VKWFN G+GFI +D +DVFVH TAI+ N R++ + + VEF + +G Sbjct: 209 TKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDVVEG 268 Query: 59 QRGPAAANVV 68 ++G AANV Sbjct: 269 EKGAEAANVT 278 >UniRef50_Q90650 Rous sarcoma virus transcription enhancer factor II n=2 Tax=Tetrapoda RepID=Q90650_CHICK Length = 298 Score = 93.6 bits (232), Expect = 2e-18, Method: Composition-based stats. Identities = 31/72 (43%), Positives = 46/72 (63%), Gaps = 4/72 (5%) Query: 1 MSNKMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFR----TLNENQKVEFSIE 56 ++ K+ G VKWFN G+GFI +D +DVFVH TAI+ N R ++ + + VEF + Sbjct: 84 LATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLASVGDGETVEFDVV 143 Query: 57 QGQRGPAAANVV 68 +G++G AANV Sbjct: 144 EGEKGAEAANVT 155 >UniRef50_A1U3R2 Cold-shock DNA-binding protein family n=3 Tax=Marinobacter RepID=A1U3R2_MARAV Length = 179 Score = 93.6 bits (232), Expect = 2e-18, Method: Composition-based stats. Identities = 30/65 (46%), Positives = 38/65 (58%), Gaps = 1/65 (1%) Query: 6 TGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPAAA 65 G VKWFN KGFGFI D G + +FVHF AI+ R L + Q V F++ + +G A Sbjct: 114 EGTVKWFNVKKGFGFIVRDSGDE-IFVHFRAIRGRGRRVLRQGQLVRFNVVEADKGLQAD 172 Query: 66 NVVTL 70 NV L Sbjct: 173 NVSIL 177 >UniRef50_C4WXL4 ACYPI009849 protein n=3 Tax=cellular organisms RepID=C4WXL4_ACYPI Length = 250 Score = 93.6 bits (232), Expect = 2e-18, Method: Composition-based stats. Identities = 33/63 (52%), Positives = 43/63 (68%) Query: 6 TGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPAAA 65 G+ KWFN+ KGFGF+TPDDG KDVFVH I+ + FR+L EN+ VEF+ + +G A Sbjct: 72 QGICKWFNSKKGFGFVTPDDGGKDVFVHQRVIKKDGFRSLRENEHVEFTCHESDKGLEAT 131 Query: 66 NVV 68 V Sbjct: 132 LVT 134 >UniRef50_A3Y9L0 Cold-shock DNA-binding domain protein n=2 Tax=Marinomonas RepID=A3Y9L0_9GAMM Length = 97 Score = 93.2 bits (231), Expect = 2e-18, Method: Composition-based stats. Identities = 37/66 (56%), Positives = 45/66 (68%), Gaps = 1/66 (1%) Query: 5 MTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPAA 64 ++G+VKWFN +KGFGFI + G DVFVHF AI RTL E QKV F + QGQ+GP A Sbjct: 33 VSGIVKWFNDEKGFGFIERE-GGPDVFVHFRAINGTGRRTLQEGQKVTFEVTQGQKGPQA 91 Query: 65 ANVVTL 70 NV + Sbjct: 92 ENVSIV 97 >UniRef50_B7PM92 PIN domain-containing RNA-binding protein, putative n=2 Tax=Ixodes scapularis RepID=B7PM92_IXOSC Length = 315 Score = 93.2 bits (231), Expect = 2e-18, Method: Composition-based stats. Identities = 30/72 (41%), Positives = 44/72 (61%), Gaps = 4/72 (5%) Query: 1 MSNKMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEF----RTLNENQKVEFSIE 56 ++ ++ G VKWFN G+GFI +D +D+FVH TAI N R++ E + VEF + Sbjct: 13 LAERVLGTVKWFNVKNGYGFINRNDTREDIFVHQTAITRNNPQKIMRSVGEGETVEFDVV 72 Query: 57 QGQRGPAAANVV 68 G++G AANV Sbjct: 73 VGEKGREAANVT 84 >UniRef50_B0KQL2 Cold-shock DNA-binding domain protein n=2 Tax=Gammaproteobacteria RepID=B0KQL2_PSEPG Length = 70 Score = 92.8 bits (230), Expect = 3e-18, Method: Composition-based stats. Identities = 35/70 (50%), Positives = 47/70 (67%), Gaps = 1/70 (1%) Query: 1 MSNKMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQR 60 M+ + G VKWFN +KG+GFITP+ G+ +FVHF AI+ N F++L E QKV F QGQ+ Sbjct: 1 MAERQNGTVKWFNDEKGYGFITPESGAD-LFVHFRAIEGNGFKSLKEGQKVTFVAVQGQK 59 Query: 61 GPAAANVVTL 70 G A V + Sbjct: 60 GLQADQVQVV 69 >UniRef50_P16989 DNA-binding protein A n=144 Tax=cellular organisms RepID=DBPA_HUMAN Length = 372 Score = 92.4 bits (229), Expect = 3e-18, Method: Composition-based stats. Identities = 31/72 (43%), Positives = 46/72 (63%), Gaps = 4/72 (5%) Query: 1 MSNKMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEF----RTLNENQKVEFSIE 56 ++ K+ G VKWFN G+GFI +D +DVFVH TAI+ N R++ + + VEF + Sbjct: 87 LATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDVV 146 Query: 57 QGQRGPAAANVV 68 +G++G AANV Sbjct: 147 EGEKGAEAANVT 158 >UniRef50_A1S709 Cold-shock DNA-binding protein family n=6 Tax=cellular organisms RepID=A1S709_SHEAM Length = 70 Score = 92.4 bits (229), Expect = 4e-18, Method: Composition-based stats. Identities = 37/65 (56%), Positives = 46/65 (70%), Gaps = 1/65 (1%) Query: 6 TGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPAAA 65 TG VKWFN +KGFGF++ D+ S VFVH+ AI + RTL E QKV FS+ +GQ+G AA Sbjct: 7 TGTVKWFNDEKGFGFLSRDNDSD-VFVHYRAINTQGRRTLKEGQKVSFSLVEGQKGLLAA 65 Query: 66 NVVTL 70 NV L Sbjct: 66 NVTPL 70 >UniRef50_B7C7U1 Putative uncharacterized protein n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7C7U1_9FIRM Length = 90 Score = 92.1 bits (228), Expect = 4e-18, Method: Composition-based stats. Identities = 35/67 (52%), Positives = 46/67 (68%), Gaps = 1/67 (1%) Query: 4 KMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPA 63 TG VKWFNA+KG+GFIT +DG KDVFVH+++I S F+TL E Q V + + + RG Sbjct: 21 MSTGKVKWFNAEKGYGFITSEDG-KDVFVHYSSINSEGFKTLEEGQTVTYDVVESDRGQQ 79 Query: 64 AANVVTL 70 A NV + Sbjct: 80 ANNVTVV 86 >UniRef50_A4RZ32 Predicted protein n=1 Tax=Ostreococcus lucimarinus CCE9901 RepID=A4RZ32_OSTLU Length = 106 Score = 92.1 bits (228), Expect = 5e-18, Method: Composition-based stats. Identities = 32/68 (47%), Positives = 44/68 (64%) Query: 1 MSNKMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQR 60 M+ + G VKWFNA KGFGFI P DGS+++FVH T I FR++ E ++VE+ ++ Sbjct: 1 MATRARGKVKWFNATKGFGFIIPHDGSEEIFVHQTGISCAGFRSVWEGEEVEYDVDDTDF 60 Query: 61 GPAAANVV 68 P A NV Sbjct: 61 APKAVNVT 68 >UniRef50_B4S1R6 Stress response protein CspD n=5 Tax=cellular organisms RepID=B4S1R6_ALTMD Length = 72 Score = 91.3 bits (226), Expect = 9e-18, Method: Composition-based stats. Identities = 30/61 (49%), Positives = 42/61 (68%) Query: 7 GLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPAAAN 66 G VKWFN KGFGFI P+DG +D+F H++ IQ +R+L Q+V F ++QG +G A N Sbjct: 4 GKVKWFNNAKGFGFIVPEDGGEDIFAHYSTIQMEGYRSLKAGQEVTFEVQQGPKGLHAEN 63 Query: 67 V 67 + Sbjct: 64 I 64 >UniRef50_P27484 Glycine-rich protein 2 n=5 Tax=Viridiplantae RepID=GRP2_NICSY Length = 214 Score = 91.3 bits (226), Expect = 9e-18, Method: Composition-based stats. Identities = 34/67 (50%), Positives = 44/67 (65%), Gaps = 1/67 (1%) Query: 3 NKMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGP 62 + G VKWF+ KGFGFITPDDG +D+FVH + I+S FR+L E + VEF +E G G Sbjct: 7 QRAKGTVKWFSDQKGFGFITPDDGGEDLFVHQSGIRSEGFRSLAEGETVEFEVESGGDGR 66 Query: 63 -AAANVV 68 A +V Sbjct: 67 TKAVDVT 73 >UniRef50_Q03A67 Cold-shock DNA-binding protein family n=16 Tax=Firmicutes RepID=Q03A67_LACC3 Length = 66 Score = 91.3 bits (226), Expect = 9e-18, Method: Composition-based stats. Identities = 37/62 (59%), Positives = 45/62 (72%), Gaps = 1/62 (1%) Query: 6 TGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPAAA 65 G VKWFNA+KG+GFIT +DGS VFVHF+AIQ + ++TL E Q V F +E RGP A Sbjct: 3 HGTVKWFNAEKGYGFITREDGSD-VFVHFSAIQGDGYKTLEEGQAVTFEVEDSDRGPQAV 61 Query: 66 NV 67 NV Sbjct: 62 NV 63 >UniRef50_A4A3Y7 Cold-shock domain family protein n=2 Tax=unclassified Gammaproteobacteria RepID=A4A3Y7_9GAMM Length = 189 Score = 91.3 bits (226), Expect = 9e-18, Method: Composition-based stats. Identities = 25/65 (38%), Positives = 35/65 (53%), Gaps = 1/65 (1%) Query: 6 TGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPAAA 65 G VKWFN KGFGFI ++G + +FVH +I R+L + V + + +GP A Sbjct: 125 EGTVKWFNGTKGFGFIIRENGDE-IFVHHRSIIGEGRRSLRDGAPVRYRVVTTDKGPQAE 183 Query: 66 NVVTL 70 V L Sbjct: 184 EVEAL 188 >UniRef50_P62171 Cold shock-like protein cspC n=85 Tax=Bacteria RepID=CSPC_BACCR Length = 65 Score = 90.9 bits (225), Expect = 1e-17, Method: Composition-based stats. Identities = 42/66 (63%), Positives = 50/66 (75%), Gaps = 1/66 (1%) Query: 5 MTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPAA 64 M G VKWFNA+KGFGFI +DG DVFVHF+AIQ + +++L E Q+VEF I G RGP A Sbjct: 1 MQGRVKWFNAEKGFGFIEREDG-DDVFVHFSAIQQDGYKSLEEGQQVEFDIVDGARGPQA 59 Query: 65 ANVVTL 70 ANVV L Sbjct: 60 ANVVKL 65 >UniRef50_Q4FT63 Cold-shock DNA-binding protein family n=10 Tax=cellular organisms RepID=Q4FT63_PSYA2 Length = 71 Score = 90.9 bits (225), Expect = 1e-17, Method: Composition-based stats. Identities = 35/70 (50%), Positives = 48/70 (68%), Gaps = 1/70 (1%) Query: 1 MSNKMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQR 60 MS + G+VKWFN KGFGFI D G +D+FVHF AIQ + +R+L + +KVEFS+ +G + Sbjct: 1 MSAREQGIVKWFNDSKGFGFIQRDSG-EDIFVHFRAIQGDGYRSLKDGEKVEFSVVEGDK 59 Query: 61 GPAAANVVTL 70 G A V + Sbjct: 60 GLQAEEVRRV 69 >UniRef50_B5X2B2 Y-box-binding protein 2-A n=1 Tax=Salmo salar RepID=B5X2B2_SALSA Length = 328 Score = 90.9 bits (225), Expect = 1e-17, Method: Composition-based stats. Identities = 29/72 (40%), Positives = 43/72 (59%), Gaps = 4/72 (5%) Query: 1 MSNKMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEF----RTLNENQKVEFSIE 56 ++ + G VKWFN G+GFI +D +DVFVH TAI+ N R++ + + VEF + Sbjct: 26 IATAVQGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKFLRSVGDGEVVEFDVV 85 Query: 57 QGQRGPAAANVV 68 + +G AANV Sbjct: 86 EAAKGSEAANVT 97 >UniRef50_Q2P2A6 Major cold shock protein n=21 Tax=Gammaproteobacteria RepID=Q2P2A6_XANOM Length = 69 Score = 90.5 bits (224), Expect = 1e-17, Method: Composition-based stats. Identities = 38/70 (54%), Positives = 46/70 (65%), Gaps = 1/70 (1%) Query: 1 MSNKMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQR 60 MS +M G+VKWFN KGFGFITP+ G +FVHF AIQ F++L E QKV F QGQ+ Sbjct: 1 MSERMNGIVKWFNDAKGFGFITPESGPD-LFVHFRAIQGTGFKSLQEGQKVTFVAVQGQK 59 Query: 61 GPAAANVVTL 70 G A V + Sbjct: 60 GMQADQVQAV 69 >UniRef50_C4Z3Q0 Cold shock protein (Beta-ribbon, CspA family) n=10 Tax=Bacteria RepID=C4Z3Q0_EUBE2 Length = 84 Score = 90.5 bits (224), Expect = 1e-17, Method: Composition-based stats. Identities = 32/67 (47%), Positives = 44/67 (65%), Gaps = 1/67 (1%) Query: 4 KMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPA 63 +M G VKWFN KG+GFI D+ KDVFVH++ + F++L E +VEF + +G +GP Sbjct: 19 EMKGTVKWFNNQKGYGFI-SDESGKDVFVHYSGLNMEGFKSLEEGAQVEFDVTEGAKGPQ 77 Query: 64 AANVVTL 70 A NV L Sbjct: 78 ATNVTKL 84 >UniRef50_B3RZU4 Putative uncharacterized protein n=1 Tax=Trichoplax adhaerens RepID=B3RZU4_TRIAD Length = 279 Score = 90.5 bits (224), Expect = 2e-17, Method: Composition-based stats. Identities = 34/72 (47%), Positives = 48/72 (66%), Gaps = 4/72 (5%) Query: 1 MSNKMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEF----RTLNENQKVEFSIE 56 ++NK++G VKWFN +G+GFI DD +DVFVH TAIQ+N R++ + + VEF + Sbjct: 25 VANKVSGKVKWFNVKRGYGFIHRDDTGEDVFVHQTAIQANNPKKYLRSVGDEEVVEFDVL 84 Query: 57 QGQRGPAAANVV 68 G +G AANV Sbjct: 85 SGPKGLEAANVT 96 >UniRef50_Q30QF0 Cold-shock DNA-binding protein family n=12 Tax=Proteobacteria RepID=Q30QF0_SULDN Length = 72 Score = 90.1 bits (223), Expect = 2e-17, Method: Composition-based stats. Identities = 34/72 (47%), Positives = 46/72 (63%), Gaps = 2/72 (2%) Query: 1 MSNKMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFR--TLNENQKVEFSIEQG 58 M+ + G VKWFN +KG+GFI ++G KDVFVHF + +L+E QKV F + +G Sbjct: 1 MAELLDGSVKWFNEEKGYGFIQQENGGKDVFVHFRQVNRTGPGRVSLSEGQKVTFELGEG 60 Query: 59 QRGPAAANVVTL 70 Q+GP A NV L Sbjct: 61 QKGPQAENVTPL 72 >UniRef50_Q1LCU6 Cold-shock DNA-binding protein family n=7 Tax=Proteobacteria RepID=Q1LCU6_RALME Length = 126 Score = 90.1 bits (223), Expect = 2e-17, Method: Composition-based stats. Identities = 35/65 (53%), Positives = 44/65 (67%) Query: 6 TGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPAAA 65 TG VKWFN KGFGFITPD G D+F HF+ +Q N F++L E QKV + GQ+GPAA Sbjct: 62 TGTVKWFNDSKGFGFITPDAGGDDLFAHFSEVQGNGFKSLQEGQKVRYVAGVGQKGPAAT 121 Query: 66 NVVTL 70 + + Sbjct: 122 KIEPI 126 >UniRef50_Q81DK5 Cold shock-like protein cspE n=713 Tax=Bacteria RepID=CSPE_BACCR Length = 67 Score = 89.8 bits (222), Expect = 2e-17, Method: Composition-based stats. Identities = 38/66 (57%), Positives = 50/66 (75%), Gaps = 1/66 (1%) Query: 5 MTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPAA 64 +TG VKWFN++KGFGFI DG+ VFVHF+AI + F++L+E Q+V F +E+G RGP A Sbjct: 3 LTGKVKWFNSEKGFGFIEVADGND-VFVHFSAITGDGFKSLDEGQEVSFEVEEGNRGPQA 61 Query: 65 ANVVTL 70 NVV L Sbjct: 62 KNVVKL 67 >UniRef50_O65639 Glycine-rich protein n=10 Tax=cellular organisms RepID=O65639_ARATH Length = 299 Score = 89.8 bits (222), Expect = 2e-17, Method: Composition-based stats. Identities = 35/69 (50%), Positives = 45/69 (65%), Gaps = 1/69 (1%) Query: 2 SNKMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRG 61 + + TG V WFNA KG+GFITPDDGS ++FVH ++I S +R+L VEF+I QG G Sbjct: 8 AARSTGKVNWFNASKGYGFITPDDGSVELFVHQSSIVSEGYRSLTVGDAVEFAITQGSDG 67 Query: 62 P-AAANVVT 69 A NV Sbjct: 68 KTKAVNVTA 76 >UniRef50_Q2LQ45 Cold shock protein n=49 Tax=Bacteria RepID=Q2LQ45_SYNAS Length = 90 Score = 89.8 bits (222), Expect = 3e-17, Method: Composition-based stats. Identities = 37/65 (56%), Positives = 47/65 (72%), Gaps = 1/65 (1%) Query: 6 TGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPAAA 65 G VKWFN KGFGFI D+G VFVH++AIQS+ F+TL E Q+V F ++ GQ+GPAA Sbjct: 27 EGKVKWFNEQKGFGFIEKDEGGD-VFVHYSAIQSSGFKTLYEGQRVSFEVQTGQKGPAAV 85 Query: 66 NVVTL 70 NV + Sbjct: 86 NVKPI 90 >UniRef50_B5HGK4 Cold shock protein n=10 Tax=Streptomyces RepID=B5HGK4_STRPR Length = 67 Score = 89.4 bits (221), Expect = 3e-17, Method: Composition-based stats. Identities = 37/66 (56%), Positives = 45/66 (68%) Query: 4 KMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPA 63 +G+VKWFNA+KGFGFI D G DVF H++ I + FR L E QKV F I QGQ+GP Sbjct: 1 MASGVVKWFNAEKGFGFIEQDGGGPDVFAHYSNIAAQGFRELLEGQKVNFDIAQGQKGPT 60 Query: 64 AANVVT 69 A N+V Sbjct: 61 AENIVP 66 >UniRef50_P54584 Cold shock protein n=9 Tax=Bacteria RepID=CSP_ARTGO Length = 67 Score = 89.4 bits (221), Expect = 3e-17, Method: Composition-based stats. Identities = 38/67 (56%), Positives = 48/67 (71%) Query: 4 KMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPA 63 G VKWFNA+KGFGFITPDD DVFVH++ IQ+ F+TL+EN +V+F I QG +GP Sbjct: 1 MAQGTVKWFNAEKGFGFITPDDSDGDVFVHYSEIQTGGFKTLDENARVQFEIGQGAKGPQ 60 Query: 64 AANVVTL 70 A V + Sbjct: 61 ATGVTLV 67 >UniRef50_P0A356 Cold shock-like protein cspLA n=163 Tax=root RepID=CSPA_LISIN Length = 66 Score = 89.4 bits (221), Expect = 3e-17, Method: Composition-based stats. Identities = 39/64 (60%), Positives = 49/64 (76%), Gaps = 1/64 (1%) Query: 6 TGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPAAA 65 G VKWFNA+KGFGFI ++G DVFVHF+AIQ + F++L+E Q V F +E+GQRGP AA Sbjct: 3 QGTVKWFNAEKGFGFIERENG-DDVFVHFSAIQGDGFKSLDEGQAVTFDVEEGQRGPQAA 61 Query: 66 NVVT 69 NV Sbjct: 62 NVQK 65 >UniRef50_B8C1C4 Cold-shock DNA-binding domain-containing protein n=1 Tax=Thalassiosira pseudonana RepID=B8C1C4_THAPS Length = 136 Score = 89.4 bits (221), Expect = 3e-17, Method: Composition-based stats. Identities = 35/67 (52%), Positives = 46/67 (68%), Gaps = 1/67 (1%) Query: 3 NKMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRG- 61 +K+ G VKWF+A KGFGF+ PDDGS +VFVH +AI +N FR+L + + VEF + Q G Sbjct: 40 DKIKGTVKWFDAKKGFGFLVPDDGSAEVFVHHSAIHANGFRSLGDGEVVEFEVMQEPNGK 99 Query: 62 PAAANVV 68 A NV Sbjct: 100 WKALNVT 106 >UniRef50_UPI000155BE86 PREDICTED: hypothetical protein, partial n=1 Tax=Ornithorhynchus anatinus RepID=UPI000155BE86 Length = 223 Score = 89.4 bits (221), Expect = 3e-17, Method: Composition-based stats. Identities = 31/72 (43%), Positives = 46/72 (63%), Gaps = 4/72 (5%) Query: 1 MSNKMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEF----RTLNENQKVEFSIE 56 ++ K+ G VKWFN G+GFI +D +DVFVH TAI+ N R++ + + VEF + Sbjct: 56 VATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDVV 115 Query: 57 QGQRGPAAANVV 68 +G++G AANV Sbjct: 116 EGEKGAEAANVT 127 >UniRef50_Q5HPE0 Cold shock protein cspA n=113 Tax=Bacteria RepID=CSPA_STAEQ Length = 66 Score = 89.4 bits (221), Expect = 3e-17, Method: Composition-based stats. Identities = 38/67 (56%), Positives = 46/67 (68%), Gaps = 1/67 (1%) Query: 4 KMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPA 63 G VKWFNA+KGFGFI + G DVFVHF+AI +++L E Q VEF + +G RGP Sbjct: 1 MKQGTVKWFNAEKGFGFIEVE-GENDVFVHFSAINQEGYKSLEEGQSVEFEVVEGDRGPQ 59 Query: 64 AANVVTL 70 AANVV L Sbjct: 60 AANVVKL 66 >UniRef50_A0NEN6 AGAP006108-PA n=4 Tax=Culicimorpha RepID=A0NEN6_ANOGA Length = 402 Score = 89.4 bits (221), Expect = 3e-17, Method: Composition-based stats. Identities = 31/72 (43%), Positives = 46/72 (63%), Gaps = 4/72 (5%) Query: 1 MSNKMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEF----RTLNENQKVEFSIE 56 ++ K+TG+VKWFN G+GFI D +DVFVH +AI N R++ + ++VEF + Sbjct: 84 IATKVTGVVKWFNVKSGYGFINRGDTQEDVFVHQSAIARNNPKKAVRSVGDGEQVEFDVV 143 Query: 57 QGQRGPAAANVV 68 G++G AANV Sbjct: 144 IGEKGNEAANVT 155 >UniRef50_O46173 Y-box protein n=14 Tax=cellular organisms RepID=O46173_DROME Length = 359 Score = 89.4 bits (221), Expect = 4e-17, Method: Composition-based stats. Identities = 31/71 (43%), Positives = 46/71 (64%), Gaps = 3/71 (4%) Query: 1 MSNKMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNE---FRTLNENQKVEFSIEQ 57 ++ K+TG VKWFN G+GFI +D +DVFVH +AI +N R++ + + VEF + Sbjct: 59 IATKVTGTVKWFNVKSGYGFINRNDTREDVFVHQSAIANNPKKAVRSVGDGEVVEFDVVI 118 Query: 58 GQRGPAAANVV 68 G++G AANV Sbjct: 119 GEKGNEAANVT 129 >UniRef50_P0A970 Cold shock-like protein cspD n=101 Tax=Gammaproteobacteria RepID=CSPD_ECO57 Length = 74 Score = 89.0 bits (220), Expect = 4e-17, Method: Composition-based stats. Identities = 30/65 (46%), Positives = 43/65 (66%) Query: 6 TGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPAAA 65 G VKWFN KGFGFI P+ G +D+F H++ IQ + +RTL Q V+F + QG +G A+ Sbjct: 3 KGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNHAS 62 Query: 66 NVVTL 70 +V + Sbjct: 63 VIVPV 67 >UniRef50_P95459 Major cold shock protein cspA n=33 Tax=cellular organisms RepID=CSPA_PSEAE Length = 69 Score = 89.0 bits (220), Expect = 4e-17, Method: Composition-based stats. Identities = 36/70 (51%), Positives = 46/70 (65%), Gaps = 1/70 (1%) Query: 1 MSNKMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQR 60 MSN+ G VKWFN KGFGFITP+ G+ +FVHF +IQ F++L E QKV F + GQ+ Sbjct: 1 MSNRQNGTVKWFNDAKGFGFITPESGND-LFVHFRSIQGTGFKSLQEGQKVSFVVVNGQK 59 Query: 61 GPAAANVVTL 70 G A V + Sbjct: 60 GLQADEVQVV 69 >UniRef50_Q9Y2T7 Y-box-binding protein 2 n=21 Tax=Tetrapoda RepID=YBOX2_HUMAN Length = 364 Score = 89.0 bits (220), Expect = 5e-17, Method: Composition-based stats. Identities = 29/72 (40%), Positives = 45/72 (62%), Gaps = 4/72 (5%) Query: 1 MSNKMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEF----RTLNENQKVEFSIE 56 ++ ++ G VKWFN G+GFI +D +DVFVH TAI+ N R++ + + VEF + Sbjct: 90 LAIQVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKRNNPRKFLRSVGDGETVEFDVV 149 Query: 57 QGQRGPAAANVV 68 +G++G A NV Sbjct: 150 EGEKGAEATNVT 161 >UniRef50_Q2LY24 Cold shock protein n=11 Tax=Bacteria RepID=Q2LY24_SYNAS Length = 132 Score = 88.6 bits (219), Expect = 5e-17, Method: Composition-based stats. Identities = 34/68 (50%), Positives = 44/68 (64%), Gaps = 1/68 (1%) Query: 3 NKMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGP 62 G VKWFNA KGFGFI D+G+ VFVHF+AI+ ++ L E +V F + +G +GP Sbjct: 66 KMSEGTVKWFNASKGFGFIAQDNGND-VFVHFSAIKMEGYKALEEGARVRFDVVKGNKGP 124 Query: 63 AAANVVTL 70 AA NV L Sbjct: 125 AADNVELL 132 >UniRef50_Q01761 Cold shock-like protein 7.0 n=356 Tax=cellular organisms RepID=CSP7_STRCL Length = 66 Score = 88.6 bits (219), Expect = 5e-17, Method: Composition-based stats. Identities = 37/66 (56%), Positives = 44/66 (66%), Gaps = 1/66 (1%) Query: 4 KMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPA 63 TG VKWFNA+KGFGFI D G DVFVH++AI + FR+L ENQ V F + G+ GP Sbjct: 1 MATGTVKWFNAEKGFGFIAQDGGGPDVFVHYSAINATGFRSLEENQVVNFDVTHGE-GPQ 59 Query: 64 AANVVT 69 A NV Sbjct: 60 AENVSP 65 >UniRef50_O13015 Y box protein 2 n=4 Tax=Clupeocephala RepID=O13015_CARAU Length = 297 Score = 88.6 bits (219), Expect = 5e-17, Method: Composition-based stats. Identities = 29/72 (40%), Positives = 43/72 (59%), Gaps = 4/72 (5%) Query: 1 MSNKMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEF----RTLNENQKVEFSIE 56 ++ + G VKWFN G+GFI +D +DVFVH TAI+ N R++ + + VEF + Sbjct: 17 IATGVEGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKFLRSVGDGEVVEFDVV 76 Query: 57 QGQRGPAAANVV 68 + +G AANV Sbjct: 77 EAAKGSEAANVT 88 >UniRef50_Q816H3 Cold shock-like protein cspD n=370 Tax=Bacteria RepID=CSPD_BACCR Length = 66 Score = 88.6 bits (219), Expect = 5e-17, Method: Composition-based stats. Identities = 39/66 (59%), Positives = 47/66 (71%), Gaps = 1/66 (1%) Query: 4 KMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPA 63 TG VKWFN++KGFGFI + G DVFVHF+AIQ + F+TL E Q+V F I +G RGP Sbjct: 1 MQTGKVKWFNSEKGFGFIEVE-GGDDVFVHFSAIQGDGFKTLEEGQEVSFEIVEGNRGPQ 59 Query: 64 AANVVT 69 AANV Sbjct: 60 AANVTK 65 >UniRef50_P71478 Cold shock protein 1 n=20 Tax=Firmicutes RepID=CSP1_LACPL Length = 66 Score = 88.6 bits (219), Expect = 6e-17, Method: Composition-based stats. Identities = 41/63 (65%), Positives = 48/63 (76%), Gaps = 1/63 (1%) Query: 7 GLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPAAAN 66 G VKWFNADKG+GFIT +DG+ VFVHF+AIQ++ F+TL E QKV F E RGP AAN Sbjct: 4 GTVKWFNADKGYGFITGEDGND-VFVHFSAIQTDGFKTLEEGQKVTFDEESSDRGPQAAN 62 Query: 67 VVT 69 VV Sbjct: 63 VVP 65 >UniRef50_B5AU39 Y-box protein Lyb1 n=1 Tax=Lethenteron japonicum RepID=B5AU39_LAMJA Length = 331 Score = 88.2 bits (218), Expect = 6e-17, Method: Composition-based stats. Identities = 31/72 (43%), Positives = 46/72 (63%), Gaps = 4/72 (5%) Query: 1 MSNKMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEF----RTLNENQKVEFSIE 56 ++ K+ G VKWFN G+GFI +D +DVFVH TAI+ N R++ + + VEF + Sbjct: 21 IATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGEVVEFDVV 80 Query: 57 QGQRGPAAANVV 68 +G++G AANV Sbjct: 81 EGEKGAEAANVT 92 >UniRef50_C6VN45 Cold shock protein CspC n=8 Tax=Firmicutes RepID=C6VN45_LACPJ Length = 66 Score = 88.2 bits (218), Expect = 6e-17, Method: Composition-based stats. Identities = 38/64 (59%), Positives = 47/64 (73%), Gaps = 1/64 (1%) Query: 6 TGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPAAA 65 G VKWFNADKGFGFIT ++GS VFVHF+AIQ + F++L+E Q V F +E+ RGP A Sbjct: 3 HGTVKWFNADKGFGFITRENGSD-VFVHFSAIQEDGFKSLDEGQAVNFDVEESDRGPQAV 61 Query: 66 NVVT 69 NV Sbjct: 62 NVTK 65 >UniRef50_B7RWZ3 'Cold-shock' DNA-binding domain protein n=1 Tax=marine gamma proteobacterium HTCC2148 RepID=B7RWZ3_9GAMM Length = 145 Score = 88.2 bits (218), Expect = 6e-17, Method: Composition-based stats. Identities = 32/67 (47%), Positives = 40/67 (59%), Gaps = 1/67 (1%) Query: 4 KMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPA 63 + G VKWFN KGFGFIT DDG +++FVHF +I R L + Q+V F +GP Sbjct: 80 REEGEVKWFNVSKGFGFITKDDG-EEIFVHFRSIIGEGRRGLKDGQRVSFVEANTDKGPQ 138 Query: 64 AANVVTL 70 A NV L Sbjct: 139 AENVEPL 145 >UniRef50_Q9VRN5 Protein lin-28 homolog n=1 Tax=Drosophila melanogaster RepID=LIN28_DROME Length = 195 Score = 88.2 bits (218), Expect = 6e-17, Method: Composition-based stats. Identities = 30/61 (49%), Positives = 42/61 (68%) Query: 7 GLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPAAAN 66 G KWFN KG+GF+TP+DG ++VFVH + IQ + FR+L E ++VEF ++ RG A Sbjct: 41 GKCKWFNVAKGWGFLTPNDGGQEVFVHQSVIQMSGFRSLGEQEEVEFECQRTSRGLEATR 100 Query: 67 V 67 V Sbjct: 101 V 101 >UniRef50_D1C6U7 Cold-shock DNA-binding domain protein n=1 Tax=Sphaerobacter thermophilus DSM 20745 RepID=D1C6U7_SPHTD Length = 77 Score = 88.2 bits (218), Expect = 7e-17, Method: Composition-based stats. Identities = 30/64 (46%), Positives = 41/64 (64%), Gaps = 3/64 (4%) Query: 6 TGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPAAA 65 TG VKW++ +KG+GFI DDG D+FVH +AI +E LNE +VEF + +GP A Sbjct: 3 TGTVKWYDPEKGYGFIARDDGDSDLFVHRSAISGSE---LNEGDRVEFDVTSSPKGPRAE 59 Query: 66 NVVT 69 +V Sbjct: 60 HVRV 63 >UniRef50_P72192 Temperature acclimation protein B (Fragment) n=85 Tax=cellular organisms RepID=TAPB_PSEFR Length = 63 Score = 88.2 bits (218), Expect = 7e-17, Method: Composition-based stats. Identities = 37/64 (57%), Positives = 45/64 (70%), Gaps = 1/64 (1%) Query: 1 MSNKMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQR 60 MS + +G VKWFN +KGFGFITP+ G +FVHF AIQ N F++L E QKV F QGQ+ Sbjct: 1 MSQRQSGTVKWFNDEKGFGFITPESGPD-LFVHFRAIQGNGFKSLKEGQKVTFIAVQGQK 59 Query: 61 GPAA 64 G A Sbjct: 60 GMQA 63 >UniRef50_UPI0001555D69 PREDICTED: similar to LD37574p, partial n=1 Tax=Ornithorhynchus anatinus RepID=UPI0001555D69 Length = 281 Score = 88.2 bits (218), Expect = 7e-17, Method: Composition-based stats. Identities = 29/74 (39%), Positives = 44/74 (59%), Gaps = 4/74 (5%) Query: 1 MSNKMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEF----RTLNENQKVEFSIE 56 ++ ++ G+VKWFN G+GFI D +DVF+H +AI N R++ E + V+F + Sbjct: 32 LATRIVGVVKWFNVRHGYGFICRIDMQEDVFIHQSAIVRNNPRKCQRSVGEGEVVQFDLV 91 Query: 57 QGQRGPAAANVVTL 70 G +G AANV L Sbjct: 92 AGAKGTEAANVTGL 105 >UniRef50_O67327 Cold shock-like protein n=2 Tax=Bacteria RepID=CSP_AQUAE Length = 70 Score = 88.2 bits (218), Expect = 7e-17, Method: Composition-based stats. Identities = 36/66 (54%), Positives = 45/66 (68%) Query: 5 MTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPAA 64 G VKWF+ DKG+GFIT +D + DVFVHFT IQ F+TL + QKVEF + + +GP A Sbjct: 3 FRGTVKWFSKDKGYGFITREDTNADVFVHFTDIQMEGFKTLQKGQKVEFDVVEDTKGPRA 62 Query: 65 ANVVTL 70 NV L Sbjct: 63 KNVRVL 68 >UniRef50_C4QN75 Y box binding protein, putative n=10 Tax=cellular organisms RepID=C4QN75_SCHMA Length = 231 Score = 88.2 bits (218), Expect = 8e-17, Method: Composition-based stats. Identities = 30/72 (41%), Positives = 43/72 (59%), Gaps = 4/72 (5%) Query: 1 MSNKMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEF----RTLNENQKVEFSIE 56 M ++ G+VKWFN G+GFI D S D+FVH +AI N R+L E ++VEF + Sbjct: 22 MEERVKGVVKWFNVKAGYGFINRQDTSTDIFVHQSAISRNNPEKLQRSLQEGEEVEFYVV 81 Query: 57 QGQRGPAAANVV 68 +G +G A+ V Sbjct: 82 EGDKGDEASEVT 93 >UniRef50_Q3AFQ5 Cold shock protein CspC n=14 Tax=Bacteria RepID=Q3AFQ5_CARHZ Length = 65 Score = 88.2 bits (218), Expect = 8e-17, Method: Composition-based stats. Identities = 39/66 (59%), Positives = 49/66 (74%), Gaps = 1/66 (1%) Query: 5 MTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPAA 64 M G VKWF+ KG+GFI +DG VFVHF+AI+ N F+TL E Q+VEF+I +G RGP A Sbjct: 1 MQGKVKWFDPAKGYGFIEREDGGD-VFVHFSAIKGNGFKTLEEGQRVEFNIVEGTRGPQA 59 Query: 65 ANVVTL 70 A+VV L Sbjct: 60 ADVVKL 65 >UniRef50_Q90WH1 Cold-shock domain protein (Fragment) n=4 Tax=Percomorpha RepID=Q90WH1_ORYLA Length = 366 Score = 87.8 bits (217), Expect = 9e-17, Method: Composition-based stats. Identities = 29/68 (42%), Positives = 41/68 (60%), Gaps = 4/68 (5%) Query: 5 MTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEF----RTLNENQKVEFSIEQGQR 60 + G VKWFN G+GFI +D +DVFVH TAI+ N R++ + + VEF + + + Sbjct: 3 VQGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKFLRSVGDGEVVEFDVIEAAK 62 Query: 61 GPAAANVV 68 G AANV Sbjct: 63 GSEAANVT 70 >UniRef50_D1H869 Whole genome shotgun sequence of line PN40024, scaffold_23.assembly12x (Fragment) n=1 Tax=Vitis vinifera RepID=D1H869_VITVI Length = 208 Score = 87.8 bits (217), Expect = 9e-17, Method: Composition-based stats. Identities = 32/67 (47%), Positives = 48/67 (71%), Gaps = 1/67 (1%) Query: 3 NKMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGP 62 + TG+V+WF+ KGFGFITP++G +D+FVH ++I+S+ FR+L E + VEF I G+ G Sbjct: 4 ERSTGVVRWFSDQKGFGFITPNEGGEDLFVHQSSIKSDGFRSLGEGETVEFQIVLGEDGR 63 Query: 63 -AAANVV 68 A +V Sbjct: 64 TKAVDVT 70 >UniRef50_Q4ZRK5 Cold-shock protein, DNA-binding n=10 Tax=Pseudomonas RepID=Q4ZRK5_PSEU2 Length = 92 Score = 87.8 bits (217), Expect = 9e-17, Method: Composition-based stats. Identities = 28/65 (43%), Positives = 40/65 (61%), Gaps = 1/65 (1%) Query: 4 KMTGLVKWFNADKGFGFITPDD-GSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGP 62 + G VKWFN KGFGFI + +D+FVHF+AI+ + ++TL QKV F + G +G Sbjct: 1 MIEGKVKWFNNAKGFGFINAEGKSDEDLFVHFSAIEMDGYKTLKAGQKVRFEVAHGPKGL 60 Query: 63 AAANV 67 A + Sbjct: 61 QAIKI 65 >UniRef50_C4QN73 Y box binding protein, putative n=4 Tax=Bilateria RepID=C4QN73_SCHMA Length = 167 Score = 87.8 bits (217), Expect = 1e-16, Method: Composition-based stats. Identities = 30/72 (41%), Positives = 43/72 (59%), Gaps = 4/72 (5%) Query: 1 MSNKMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEF----RTLNENQKVEFSIE 56 M ++ G+VKWFN G+GFI D S D+FVH +AI N R+L E ++VEF + Sbjct: 22 MEERVKGVVKWFNVKAGYGFINRQDTSTDIFVHQSAISRNNPEKLQRSLQEGEEVEFYVV 81 Query: 57 QGQRGPAAANVV 68 +G +G A+ V Sbjct: 82 EGDKGDEASEVT 93 >UniRef50_C0QFU1 CspA n=4 Tax=cellular organisms RepID=C0QFU1_DESAH Length = 66 Score = 87.4 bits (216), Expect = 1e-16, Method: Composition-based stats. Identities = 37/64 (57%), Positives = 47/64 (73%), Gaps = 1/64 (1%) Query: 7 GLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPAAAN 66 G VKWFN KGFGFI ++G +DVFVH + I ++ F++LNE KV F IEQGQ+GPAA N Sbjct: 4 GTVKWFNDSKGFGFIEQENG-EDVFVHHSGINASGFKSLNEGDKVTFDIEQGQKGPAATN 62 Query: 67 VVTL 70 V + Sbjct: 63 VTVV 66 >UniRef50_P41824 Y-box factor homolog n=1 Tax=Aplysia californica RepID=YBOXH_APLCA Length = 253 Score = 87.4 bits (216), Expect = 1e-16, Method: Composition-based stats. Identities = 32/72 (44%), Positives = 48/72 (66%), Gaps = 4/72 (5%) Query: 1 MSNKMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEF----RTLNENQKVEFSIE 56 ++++++G VKWFN G+GFI DD +DVFVH TAI N R++ + +KVEF + Sbjct: 29 IASQVSGTVKWFNVKSGYGFINRDDTKEDVFVHQTAIVKNNPRKYLRSVGDGEKVEFDVV 88 Query: 57 QGQRGPAAANVV 68 +G++G AANV Sbjct: 89 EGEKGNEAANVT 100 >UniRef50_A3XD40 Cold shock family protein n=5 Tax=Rhodobacteraceae RepID=A3XD40_9RHOB Length = 120 Score = 87.4 bits (216), Expect = 1e-16, Method: Composition-based stats. Identities = 35/64 (54%), Positives = 44/64 (68%) Query: 2 SNKMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRG 61 + TG VKWFN+ KGFGFI PD G+KDVFVH +A++ + L +NQKV F IE G+ G Sbjct: 51 TEMATGTVKWFNSTKGFGFIAPDGGTKDVFVHISAVERSGLTGLADNQKVTFDIEPGRDG 110 Query: 62 PAAA 65 AA Sbjct: 111 REAA 114 >UniRef50_B4SCC3 Cold-shock DNA-binding domain protein n=4 Tax=cellular organisms RepID=B4SCC3_PELPB Length = 69 Score = 87.1 bits (215), Expect = 2e-16, Method: Composition-based stats. Identities = 33/70 (47%), Positives = 42/70 (60%), Gaps = 1/70 (1%) Query: 1 MSNKMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQR 60 M ++ G VKWFN +KG+GFI G KDVFVH +AI +TL E QKV + QG + Sbjct: 1 MGTQVEGTVKWFNEEKGYGFIEQ-KGGKDVFVHHSAINGTGRKTLVEGQKVMMEVTQGAK 59 Query: 61 GPAAANVVTL 70 G A +V L Sbjct: 60 GLQAEDVTPL 69 >UniRef50_C9KNJ1 Conserved domain protein n=1 Tax=Mitsuokella multacida DSM 20544 RepID=C9KNJ1_9FIRM Length = 66 Score = 87.1 bits (215), Expect = 2e-16, Method: Composition-based stats. Identities = 39/65 (60%), Positives = 47/65 (72%), Gaps = 1/65 (1%) Query: 5 MTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPAA 64 M G VKWF+ +KG+GFI + G DVFVHF+AIQ F+TLNE Q VEF I +G RGP A Sbjct: 1 MVGKVKWFSPEKGYGFIARE-GGDDVFVHFSAIQDEGFKTLNEGQDVEFEIVEGARGPQA 59 Query: 65 ANVVT 69 ANV+ Sbjct: 60 ANVIK 64 >UniRef50_Q5CVY2 Cold shock RNA binding domain of the OB fold (Fragment) n=2 Tax=Cryptosporidium RepID=Q5CVY2_CRYPV Length = 135 Score = 87.1 bits (215), Expect = 2e-16, Method: Composition-based stats. Identities = 32/64 (50%), Positives = 47/64 (73%), Gaps = 1/64 (1%) Query: 5 MTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPA- 63 ++G+ KWF++ KGFGFITPDDGS+D+FVH I+ FR+L ++++VE+ IE +G Sbjct: 11 LSGVCKWFDSTKGFGFITPDDGSEDIFVHQQNIKVEGFRSLAQDERVEYEIETDDKGRRK 70 Query: 64 AANV 67 A NV Sbjct: 71 AVNV 74 >UniRef50_Q3IC55 Cold shock protein n=52 Tax=Bacteria RepID=Q3IC55_PSEHT Length = 68 Score = 87.1 bits (215), Expect = 2e-16, Method: Composition-based stats. Identities = 36/65 (55%), Positives = 47/65 (72%), Gaps = 1/65 (1%) Query: 6 TGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPAAA 65 TG VKWFN KGFGFI + G VF HF+AI S+ F+TL E Q+V+F++ QGQ+GP A Sbjct: 5 TGSVKWFNEAKGFGFIEQESGPD-VFAHFSAITSDGFKTLAEGQRVQFTVTQGQKGPQAE 63 Query: 66 NVVTL 70 N+V + Sbjct: 64 NIVCI 68 >UniRef50_O62213 Protein F33A8.3, confirmed by transcript evidence n=2 Tax=Caenorhabditis RepID=O62213_CAEEL Length = 208 Score = 87.1 bits (215), Expect = 2e-16, Method: Composition-based stats. Identities = 31/71 (43%), Positives = 45/71 (63%), Gaps = 4/71 (5%) Query: 2 SNKMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEF----RTLNENQKVEFSIEQ 57 + K+ G VKWFN G+GFI D ++D+FVH TAI +N R+L +N++V F I + Sbjct: 18 ATKVKGTVKWFNVKNGYGFINRTDTNEDIFVHQTAIINNNPNKYLRSLGDNEEVMFDIVE 77 Query: 58 GQRGPAAANVV 68 G +G AA+V Sbjct: 78 GSKGLEAASVT 88 >UniRef50_B5A4M3 Glycine-rich nucleic acid binding protein n=1 Tax=Gymnochlora stellata RepID=B5A4M3_GYMST Length = 290 Score = 86.7 bits (214), Expect = 2e-16, Method: Composition-based stats. Identities = 31/69 (44%), Positives = 44/69 (63%), Gaps = 1/69 (1%) Query: 1 MSNKMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQR 60 + ++ +G KWFN KG+GFI P +G D+FVH TAI++ FR+L E ++VEF +E Sbjct: 20 LPDRQSGTCKWFNTVKGYGFILPQEGKDDIFVHQTAIKAVGFRSLAEGEQVEFDVEVDAT 79 Query: 61 GP-AAANVV 68 G A NV Sbjct: 80 GRKKARNVT 88 >UniRef50_UPI00004F1407 PREDICTED: similar to CSDA protein n=1 Tax=Bos taurus RepID=UPI00004F1407 Length = 323 Score = 86.7 bits (214), Expect = 2e-16, Method: Composition-based stats. Identities = 29/72 (40%), Positives = 42/72 (58%), Gaps = 4/72 (5%) Query: 1 MSNKMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNE----FRTLNENQKVEFSIE 56 +S ++ G V WF KG+GFI+ D +DVFVH TAI ++++ + VEF + Sbjct: 64 ISKRVLGTVVWFKEKKGYGFISRQDTQEDVFVHHTAITGKNPCTYRGSVDDGEMVEFDVV 123 Query: 57 QGQRGPAAANVV 68 QG+ G AANV Sbjct: 124 QGEWGTEAANVT 135 >UniRef50_UPI00017B0A95 UPI00017B0A95 related cluster n=1 Tax=Tetraodon nigroviridis RepID=UPI00017B0A95 Length = 321 Score = 86.7 bits (214), Expect = 2e-16, Method: Composition-based stats. Identities = 29/73 (39%), Positives = 44/73 (60%), Gaps = 5/73 (6%) Query: 1 MSNKMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEF----RTLNENQKVEFSIE 56 ++ + G VKWFN G+GFI +D +DVFVH TAI+ N R++ + + VEF + Sbjct: 26 IATLVQGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKRNNPRKFLRSVGDGELVEFDVI 85 Query: 57 Q-GQRGPAAANVV 68 + ++G AANV Sbjct: 86 EAAKKGSEAANVT 98 >UniRef50_B4U902 Cold-shock DNA-binding domain protein n=9 Tax=Bacteria RepID=B4U902_HYDS0 Length = 71 Score = 86.7 bits (214), Expect = 2e-16, Method: Composition-based stats. Identities = 35/68 (51%), Positives = 47/68 (69%), Gaps = 2/68 (2%) Query: 5 MTGLVKWFNADKGFGFITPDDGSKDVFVHFTAI--QSNEFRTLNENQKVEFSIEQGQRGP 62 +TG VKWF+ +KG+GF+T DD DVFVHF+AI F+TL + Q+VEF ++Q +GP Sbjct: 3 ITGTVKWFSKEKGYGFLTRDDNQGDVFVHFSAIDPNRQGFKTLVQGQRVEFEVDQDSKGP 62 Query: 63 AAANVVTL 70 A NV L Sbjct: 63 RAKNVRVL 70 >UniRef50_C4WSK9 ACYPI003867 protein n=1 Tax=Acyrthosiphon pisum RepID=C4WSK9_ACYPI Length = 305 Score = 86.7 bits (214), Expect = 2e-16, Method: Composition-based stats. Identities = 31/72 (43%), Positives = 47/72 (65%), Gaps = 4/72 (5%) Query: 1 MSNKMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEF----RTLNENQKVEFSIE 56 +S K+TG+VKWFN G+GFI +D +D+FVH +AI N R++ + + VEF + Sbjct: 24 ISVKVTGVVKWFNVKSGYGFINRNDTKEDIFVHQSAIIKNNPKKIVRSVGDGETVEFDVV 83 Query: 57 QGQRGPAAANVV 68 +G++G AANV Sbjct: 84 EGEKGHEAANVT 95 >UniRef50_D0MDE8 Cold-shock DNA-binding domain protein n=1 Tax=Rhodothermus marinus DSM 4252 RepID=D0MDE8_RHOM4 Length = 95 Score = 86.3 bits (213), Expect = 3e-16, Method: Composition-based stats. Identities = 33/71 (46%), Positives = 46/71 (64%), Gaps = 2/71 (2%) Query: 1 MSNKMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSN-EFRTLNENQKVEFSIEQGQ 59 M+ + G+VKWF+A KG+GFI +G D+FVH++ I S F+TL Q VEF + +G Sbjct: 1 MAAR-RGVVKWFDAKKGYGFIIHPEGGADIFVHYSQIISERRFKTLRTGQIVEFELHEGP 59 Query: 60 RGPAAANVVTL 70 +G A NVV L Sbjct: 60 KGLHARNVVPL 70 >UniRef50_A5VRM7 Cold-shock family protein n=37 Tax=Brucellaceae RepID=A5VRM7_BRUO2 Length = 105 Score = 86.3 bits (213), Expect = 3e-16, Method: Composition-based stats. Identities = 32/57 (56%), Positives = 37/57 (64%) Query: 4 KMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQR 60 TG VKWFN KGFGFI PD G DVFVH +A+Q TL+E QKV + I Q +R Sbjct: 42 MATGTVKWFNTTKGFGFIQPDQGGTDVFVHISAVQRAGLTTLDEGQKVSYEIVQDRR 98 >UniRef50_B3QZU5 Cold shock-like protein n=1 Tax=Candidatus Phytoplasma mali AT RepID=B3QZU5_PHYMT Length = 85 Score = 85.9 bits (212), Expect = 3e-16, Method: Composition-based stats. Identities = 31/71 (43%), Positives = 48/71 (67%), Gaps = 1/71 (1%) Query: 1 MSNKMTGLVKWFNADKGFGFIT-PDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQ 59 + K+ G+ +WFN DKGFGF+ D S+D+F H T I+ FR+L+E ++VEF++ QG+ Sbjct: 9 CTEKIKGVCRWFNKDKGFGFLQKLDSDSQDIFFHQTDIKCEGFRSLDEGEEVEFTLVQGE 68 Query: 60 RGPAAANVVTL 70 +GP A +V Sbjct: 69 KGPQAIEIVRF 79 >UniRef50_UPI000051480C PREDICTED: similar to ypsilon schachtel CG5654-PA n=2 Tax=Apocrita RepID=UPI000051480C Length = 279 Score = 85.9 bits (212), Expect = 3e-16, Method: Composition-based stats. Identities = 32/72 (44%), Positives = 46/72 (63%), Gaps = 4/72 (5%) Query: 1 MSNKMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEF----RTLNENQKVEFSIE 56 ++NK+TG VKWFN G+GFI +D +DVFVH +AI N R++ + + VEF + Sbjct: 20 IANKVTGTVKWFNVKSGYGFINRNDTKEDVFVHQSAIVKNNPRKAVRSVGDGEVVEFDVV 79 Query: 57 QGQRGPAAANVV 68 G++G AANV Sbjct: 80 IGEKGHEAANVT 91 >UniRef50_O54310 Cold shock-like protein n=7 Tax=Bacteria RepID=CSP_THEMA Length = 66 Score = 85.9 bits (212), Expect = 3e-16, Method: Composition-based stats. Identities = 35/66 (53%), Positives = 49/66 (74%), Gaps = 1/66 (1%) Query: 5 MTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPAA 64 M G VKWF++ KG+GFIT D+G VFVH++AI+ F+TL E Q VEF I++G++GP A Sbjct: 1 MRGKVKWFDSKKGYGFITKDEGGD-VFVHWSAIEMEGFKTLKEGQVVEFEIQEGKKGPQA 59 Query: 65 ANVVTL 70 A+V + Sbjct: 60 AHVKVV 65 >UniRef50_A4XHY2 Cold-shock DNA-binding protein family n=3 Tax=cellular organisms RepID=A4XHY2_CALS8 Length = 66 Score = 85.9 bits (212), Expect = 4e-16, Method: Composition-based stats. Identities = 33/66 (50%), Positives = 45/66 (68%), Gaps = 1/66 (1%) Query: 5 MTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPAA 64 M G VKWFN +KG+GFI+ ++G DVFVHF+AI ++TL E Q VEF + + +RG A Sbjct: 1 MRGRVKWFNPEKGYGFISTENG-DDVFVHFSAINMEGYKTLAEGQMVEFDVVKSERGNQA 59 Query: 65 ANVVTL 70 NV + Sbjct: 60 VNVRKV 65 >UniRef50_A8I8L3 Cold-shock DNA-binding domain n=1 Tax=Azorhizobium caulinodans ORS 571 RepID=A8I8L3_AZOC5 Length = 117 Score = 85.9 bits (212), Expect = 4e-16, Method: Composition-based stats. Identities = 30/67 (44%), Positives = 41/67 (61%), Gaps = 2/67 (2%) Query: 6 TGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQR--GPA 63 TG VKWFN +KGFGFI PDDG D FVH +A++ L E QKV + + +R + Sbjct: 50 TGTVKWFNPEKGFGFIAPDDGGADAFVHISAVERAGLPPLREGQKVNYDLVADKRSGKSS 109 Query: 64 AANVVTL 70 A+N+ + Sbjct: 110 ASNLTLV 116 >UniRef50_UPI0000F32A39 PREDICTED: Bos taurus similar to transcription factor EF1(A) (LOC783156), mRNA. n=2 Tax=Laurasiatheria RepID=UPI0000F32A39 Length = 313 Score = 85.9 bits (212), Expect = 4e-16, Method: Composition-based stats. Identities = 30/72 (41%), Positives = 44/72 (61%), Gaps = 5/72 (6%) Query: 1 MSNKMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEF----RTLNENQKVEFSIE 56 ++ K+ G VKWFN G+GFI +D +DVFVH TAI+ N R++ + + EF + Sbjct: 55 IATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGET-EFDVV 113 Query: 57 QGQRGPAAANVV 68 +G +G AANV Sbjct: 114 EGGKGAEAANVT 125 >UniRef50_C5RTX4 Cold-shock DNA-binding domain protein n=13 Tax=cellular organisms RepID=C5RTX4_9THEO Length = 67 Score = 85.9 bits (212), Expect = 4e-16, Method: Composition-based stats. Identities = 34/67 (50%), Positives = 48/67 (71%), Gaps = 1/67 (1%) Query: 4 KMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPA 63 + G VKWFNA+KG+GFI +DG DVFVH++AI+ + F+TL E QKVEF + + +GP Sbjct: 1 MVRGKVKWFNAEKGYGFIEREDG-TDVFVHYSAIEGDGFKTLEEGQKVEFEVVEATKGPQ 59 Query: 64 AANVVTL 70 A+ V + Sbjct: 60 ASKVRKV 66 >UniRef50_D0KX28 Cold-shock DNA-binding domain protein n=1 Tax=Halothiobacillus neapolitanus c2 RepID=D0KX28_HALNC Length = 143 Score = 85.5 bits (211), Expect = 4e-16, Method: Composition-based stats. Identities = 35/67 (52%), Positives = 44/67 (65%), Gaps = 1/67 (1%) Query: 4 KMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPA 63 + G VKWFN DKGFGFI ++G +D+FVHF A+ L E QKVE+ I QG++GP Sbjct: 77 REVGHVKWFNTDKGFGFIVRENG-EDLFVHFRAVGDGSTLQLVEGQKVEYHIGQGRKGPQ 135 Query: 64 AANVVTL 70 A VV L Sbjct: 136 AEQVVIL 142 >UniRef50_A1U1H2 Cold-shock DNA-binding protein family n=5 Tax=Gammaproteobacteria RepID=A1U1H2_MARAV Length = 103 Score = 85.5 bits (211), Expect = 5e-16, Method: Composition-based stats. Identities = 27/64 (42%), Positives = 38/64 (59%) Query: 6 TGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPAAA 65 G VKWFN KG+GFI D S D+F HF+++Q + ++TL Q V F + +G A Sbjct: 3 RGKVKWFNNAKGYGFIIEDGCSDDLFAHFSSVQMDGYKTLKAGQTVTFDKKPSDKGVHAI 62 Query: 66 NVVT 69 N+V Sbjct: 63 NIVP 66 >UniRef50_C8P136 Conserved domain protein n=6 Tax=Bacteria RepID=C8P136_ERYRH Length = 66 Score = 85.5 bits (211), Expect = 5e-16, Method: Composition-based stats. Identities = 33/67 (49%), Positives = 49/67 (73%), Gaps = 1/67 (1%) Query: 4 KMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPA 63 TG VK+FNA+KG+GFIT + G +D+FVH++AI ++ ++TL E Q+V F + +G RG Sbjct: 1 MSTGKVKFFNAEKGYGFITIE-GGQDIFVHYSAIVADGYKTLEEGQEVSFEVVEGPRGEQ 59 Query: 64 AANVVTL 70 AANV + Sbjct: 60 AANVRGI 66 >UniRef50_B0S1I2 Cold shock protein n=4 Tax=cellular organisms RepID=B0S1I2_FINM2 Length = 67 Score = 85.5 bits (211), Expect = 5e-16, Method: Composition-based stats. Identities = 37/66 (56%), Positives = 45/66 (68%), Gaps = 2/66 (3%) Query: 6 TGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNE-FRTLNENQKVEFSIEQGQRGPAA 64 G VKWFNA KGFGFI+ +D VFVH+TAI+ N +R L ENQ+VEF I +G +G A Sbjct: 3 KGKVKWFNATKGFGFISTEDQGD-VFVHYTAIEDNGEYRKLEENQEVEFEISEGPKGLQA 61 Query: 65 ANVVTL 70 NV L Sbjct: 62 CNVKKL 67 >UniRef50_C1F531 Cold shock protein n=1 Tax=Acidobacterium capsulatum ATCC 51196 RepID=C1F531_ACIC5 Length = 87 Score = 85.1 bits (210), Expect = 5e-16, Method: Composition-based stats. Identities = 36/66 (54%), Positives = 46/66 (69%), Gaps = 1/66 (1%) Query: 4 KMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPA 63 K G+VKWFN KG+GFI +DVFVHF+AIQ + ++TLNE + VEF +QG +G Sbjct: 21 KENGVVKWFNGAKGYGFIQR-STGEDVFVHFSAIQDSGYKTLNEGEAVEFECQQGPKGLN 79 Query: 64 AANVVT 69 AANVV Sbjct: 80 AANVVR 85 >UniRef50_B9F7B8 Putative uncharacterized protein n=1 Tax=Oryza sativa Japonica Group RepID=B9F7B8_ORYSJ Length = 233 Score = 85.1 bits (210), Expect = 5e-16, Method: Composition-based stats. Identities = 28/71 (39%), Positives = 48/71 (67%), Gaps = 1/71 (1%) Query: 1 MSNKMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQR 60 +S ++ G VK F+A GFGFITPDD +D+F+H ++++ +++R+LN++ +E S+ G Sbjct: 2 VSERVKGTVKGFDATNGFGFITPDDDGEDLFIHQSSLKFDDYRSLNDSDVIELSVGSGND 61 Query: 61 GP-AAANVVTL 70 G A +V L Sbjct: 62 GRNKAVDVTAL 72 >UniRef50_B0UEI2 Cold-shock DNA-binding domain protein n=11 Tax=Alphaproteobacteria RepID=B0UEI2_METS4 Length = 242 Score = 84.7 bits (209), Expect = 7e-16, Method: Composition-based stats. Identities = 28/68 (41%), Positives = 43/68 (63%) Query: 2 SNKMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRG 61 S +M+G VKW++ KGFGF++ DG KDVFVH +A+ +L E Q+V + +GQ+G Sbjct: 173 STEMSGTVKWYDPAKGFGFVSVKDGGKDVFVHRSALARAGLDSLAEGQQVTMGVVEGQKG 232 Query: 62 PAAANVVT 69 A ++ Sbjct: 233 REAQSITV 240 Score = 69.7 bits (170), Expect = 3e-11, Method: Composition-based stats. Identities = 24/63 (38%), Positives = 36/63 (57%) Query: 8 LVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPAAANV 67 VKWFN +KGFGF+ DGS D F+H A+++ L ++ QGQ+GP N+ Sbjct: 65 TVKWFNKEKGFGFVELGDGSGDAFLHIRAVEAAGHADLLPGTRLTVQTAQGQKGPQVTNI 124 Query: 68 VTL 70 ++ Sbjct: 125 TSV 127 >UniRef50_D0MCR5 Cold-shock DNA-binding domain protein n=1 Tax=Rhodothermus marinus DSM 4252 RepID=D0MCR5_RHOM4 Length = 76 Score = 84.7 bits (209), Expect = 8e-16, Method: Composition-based stats. Identities = 32/71 (45%), Positives = 45/71 (63%), Gaps = 3/71 (4%) Query: 1 MSNKMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRT-LNENQKVEFSIEQGQ 59 M+ + G VKWFN DKG+GFI P+DGSKDVFVH + + L E ++V + +E+ Sbjct: 1 MAQR--GRVKWFNIDKGYGFIEPNDGSKDVFVHRNNVPGLGWDEGLREGEEVSYEVERTP 58 Query: 60 RGPAAANVVTL 70 +G +A NV L Sbjct: 59 KGLSAMNVERL 69 >UniRef50_A9W6T1 Cold-shock protein DNA-binding n=32 Tax=Bacteria RepID=A9W6T1_METEP Length = 281 Score = 84.4 bits (208), Expect = 1e-15, Method: Composition-based stats. Identities = 29/68 (42%), Positives = 45/68 (66%) Query: 2 SNKMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRG 61 S +MTG VKW++ KGFGF++ +DG KDVFVH +A+ +L E Q+V + +GQ+G Sbjct: 212 SVEMTGTVKWYDPAKGFGFVSVNDGGKDVFVHRSALSRAGLDSLAEGQQVTLGVVEGQKG 271 Query: 62 PAAANVVT 69 A+++ Sbjct: 272 REASSITV 279 Score = 66.3 bits (161), Expect = 3e-10, Method: Composition-based stats. Identities = 24/63 (38%), Positives = 35/63 (55%) Query: 8 LVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPAAANV 67 VKWFN +KGFGF+ DGS D F+H A+++ L ++ QGQ+GP V Sbjct: 81 TVKWFNKEKGFGFVELGDGSGDAFLHIRAVEAAGHDDLLPGTRLTVQTAQGQKGPQVTAV 140 Query: 68 VTL 70 ++ Sbjct: 141 NSV 143 >UniRef50_Q9AN51 Blr1947 protein n=2 Tax=Bradyrhizobium japonicum RepID=Q9AN51_BRAJA Length = 120 Score = 84.4 bits (208), Expect = 1e-15, Method: Composition-based stats. Identities = 29/64 (45%), Positives = 40/64 (62%) Query: 7 GLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPAAAN 66 G VKWFN KG+GF+ PDDG KDVFVH +A++ + +L E KV + + + G AA Sbjct: 56 GTVKWFNPTKGYGFVAPDDGGKDVFVHISAVEKAGYTSLVEGAKVGYELVTNRSGKQAAE 115 Query: 67 VVTL 70 + L Sbjct: 116 NLRL 119 >UniRef50_Q0SKK0 Cold shock protein n=1 Tax=Rhodococcus jostii RHA1 RepID=Q0SKK0_RHOSR Length = 119 Score = 84.4 bits (208), Expect = 1e-15, Method: Composition-based stats. Identities = 29/64 (45%), Positives = 42/64 (65%) Query: 6 TGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPAAA 65 TG V+WFNA++GFGF+ P DGS D+FVH + I + R L E Q+V F++ + + G A Sbjct: 55 TGTVRWFNAEQGFGFLAPADGSDDIFVHVSEIAGDGHRILEEGQRVSFAVCRTETGDQAR 114 Query: 66 NVVT 69 +V Sbjct: 115 DVRI 118 >UniRef50_Q11GE9 Cold-shock DNA-binding protein family n=10 Tax=Alphaproteobacteria RepID=Q11GE9_MESSB Length = 70 Score = 84.0 bits (207), Expect = 1e-15, Method: Composition-based stats. Identities = 35/63 (55%), Positives = 47/63 (74%), Gaps = 2/63 (3%) Query: 6 TGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQ--RGPA 63 TG VK+FNA KGFGFITPD+G KDVFVH +A++++ R+L + QKV F +E + +GP Sbjct: 4 TGTVKFFNATKGFGFITPDNGQKDVFVHISAVEASGMRSLVDGQKVSFDVEPDRMGKGPK 63 Query: 64 AAN 66 A N Sbjct: 64 AVN 66 >UniRef50_Q1YTJ3 Cold shock protein n=1 Tax=gamma proteobacterium HTCC2207 RepID=Q1YTJ3_9GAMM Length = 89 Score = 84.0 bits (207), Expect = 1e-15, Method: Composition-based stats. Identities = 27/64 (42%), Positives = 41/64 (64%) Query: 6 TGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPAAA 65 TG VKWF+ D+GFGFI PD+G +++F H I ++TL Q+V + +E G+ G A Sbjct: 4 TGRVKWFSNDRGFGFIEPDNGERELFAHHQNIIMEGYKTLKCFQRVTYDVEHGKNGRHAV 63 Query: 66 NVVT 69 N++ Sbjct: 64 NIIP 67 >UniRef50_A3YG84 Cold-shock protein CspD n=2 Tax=Marinomonas RepID=A3YG84_9GAMM Length = 92 Score = 84.0 bits (207), Expect = 1e-15, Method: Composition-based stats. Identities = 23/64 (35%), Positives = 39/64 (60%) Query: 6 TGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPAAA 65 G VKWFN KG+GFI + +D+F+H+++I + ++TL Q V F G++G A Sbjct: 3 HGTVKWFNNAKGYGFIVSESFEEDLFIHYSSILIDGYKTLKAGQSVSFKTSPGKQGLHAV 62 Query: 66 NVVT 69 +++ Sbjct: 63 DIMP 66 >UniRef50_Q1RLA8 Zinc finger protein n=1 Tax=Ciona intestinalis RepID=Q1RLA8_CIOIN Length = 193 Score = 84.0 bits (207), Expect = 1e-15, Method: Composition-based stats. Identities = 29/65 (44%), Positives = 41/65 (63%), Gaps = 3/65 (4%) Query: 7 GLVKWFNADKGFGFITPDDGSK---DVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPA 63 G KWFN+ +G+GFITPD S+ DVFVH ++I FR+L E +V+F + ++G Sbjct: 29 GNCKWFNSKQGYGFITPDTSSQEKTDVFVHQSSIDMEGFRSLQEGDRVKFWYKPSKKGLE 88 Query: 64 AANVV 68 A VV Sbjct: 89 AVKVV 93 >UniRef50_Q38896 Glycine-rich protein 2b n=125 Tax=cellular organisms RepID=GRP2B_ARATH Length = 201 Score = 83.6 bits (206), Expect = 2e-15, Method: Composition-based stats. Identities = 32/66 (48%), Positives = 42/66 (63%), Gaps = 1/66 (1%) Query: 3 NKMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRG- 61 ++ G VKWF+ KGFGFITP DG D+FVH ++I+S FR+L + VEF +E G Sbjct: 13 DRRKGTVKWFDTQKGFGFITPSDGGDDLFVHQSSIRSEGFRSLAAEESVEFDVEVDNSGR 72 Query: 62 PAAANV 67 P A V Sbjct: 73 PKAIEV 78 >UniRef50_B8KR01 'Cold-shock' DNA-binding domain protein n=1 Tax=gamma proteobacterium NOR51-B RepID=B8KR01_9GAMM Length = 123 Score = 83.6 bits (206), Expect = 2e-15, Method: Composition-based stats. Identities = 30/65 (46%), Positives = 42/65 (64%), Gaps = 1/65 (1%) Query: 6 TGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPAAA 65 G +KWFNA KGFGFIT DDG++ VFVHF ++ R + Q+V + + + +RGP A Sbjct: 60 KGSIKWFNATKGFGFITGDDGNE-VFVHFRNVEQLSKREIKPGQRVAYRVTETERGPQAE 118 Query: 66 NVVTL 70 +V L Sbjct: 119 DVSPL 123 >UniRef50_D0LU49 Cold-shock DNA-binding domain protein n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LU49_HALO1 Length = 94 Score = 83.2 bits (205), Expect = 2e-15, Method: Composition-based stats. Identities = 30/63 (47%), Positives = 44/63 (69%), Gaps = 1/63 (1%) Query: 6 TGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPAAA 65 TG VKWFN KG+GFI +DG +DVFVH++ I ++ +R L E + VE+ +++G +G AA Sbjct: 3 TGAVKWFNNVKGYGFILREDG-QDVFVHWSNILADGYRLLTEGEIVEYELQEGPKGLFAA 61 Query: 66 NVV 68 V Sbjct: 62 QVK 64 >UniRef50_D2QP83 Cold-shock DNA-binding domain protein n=5 Tax=Bacteroidetes RepID=D2QP83_9SPHI Length = 198 Score = 82.8 bits (204), Expect = 3e-15, Method: Composition-based stats. Identities = 31/65 (47%), Positives = 40/65 (61%), Gaps = 4/65 (6%) Query: 6 TGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPAAA 65 TG VK+FN KGFGFI D D+FVH +A+ ++EN KV FSIE G++G A Sbjct: 138 TGTVKFFNETKGFGFIKSDSSGDDIFVHVSALIDQ----IHENDKVRFSIEHGRKGLNAV 193 Query: 66 NVVTL 70 N+ L Sbjct: 194 NIKLL 198 >UniRef50_Q2S0T4 Conserved domain protein n=2 Tax=Bacteria RepID=Q2S0T4_SALRD Length = 110 Score = 82.8 bits (204), Expect = 3e-15, Method: Composition-based stats. Identities = 29/64 (45%), Positives = 40/64 (62%), Gaps = 1/64 (1%) Query: 8 LVKWFNADKGFGFITPDDGSKDVFVHFTAIQ-SNEFRTLNENQKVEFSIEQGQRGPAAAN 66 VKWF+A KG+GFI D +DVFVH++ IQ ++F+TL +Q V F + G +G A Sbjct: 5 TVKWFDAKKGYGFIHHPDDGEDVFVHYSNIQSDDDFKTLKSDQHVRFEMNDGPKGLHALE 64 Query: 67 VVTL 70 V L Sbjct: 65 VAPL 68 >UniRef50_A7HXE8 Putative cold-shock DNA-binding domain protein n=1 Tax=Parvibaculum lavamentivorans DS-1 RepID=A7HXE8_PARL1 Length = 199 Score = 82.4 bits (203), Expect = 4e-15, Method: Composition-based stats. Identities = 26/70 (37%), Positives = 41/70 (58%) Query: 1 MSNKMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQR 60 +S ++TG+VKWF+A KG+GFI P++G DV VH + ++ L+E V + + Sbjct: 34 VSFEITGVVKWFDAVKGYGFIIPENGGDDVLVHLSCLKQAGLEALDEGTTVTCEAVRRPK 93 Query: 61 GPAAANVVTL 70 G A VV + Sbjct: 94 GAQAIRVVDV 103 Score = 63.2 bits (153), Expect = 2e-09, Method: Composition-based stats. Identities = 19/62 (30%), Positives = 34/62 (54%) Query: 8 LVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPAAANV 67 +VKWFN +G+GF+T +G+ D+F+H ++ R L Q++ +G +G A + Sbjct: 137 IVKWFNRARGYGFVTRGEGTPDIFIHMETLRRYGIRDLLPGQQINVRFGEGPKGLMVAEI 196 Query: 68 VT 69 Sbjct: 197 AP 198 >UniRef50_Q47TE2 Cold-shock DNA-binding protein family n=9 Tax=Actinobacteria (class) RepID=Q47TE2_THEFY Length = 127 Score = 82.4 bits (203), Expect = 4e-15, Method: Composition-based stats. Identities = 31/65 (47%), Positives = 42/65 (64%), Gaps = 2/65 (3%) Query: 6 TGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPAAA 65 TG VKW++A KGFGF+T DDG + VF+H +A+ TL Q+VEF I +G++G A Sbjct: 3 TGKVKWYDAGKGFGFLTKDDGGE-VFLHASALPP-GTTTLRPGQRVEFGIVEGRKGTQAL 60 Query: 66 NVVTL 70 V L Sbjct: 61 QVRLL 65 >UniRef50_A5N624 CspA n=10 Tax=cellular organisms RepID=A5N624_CLOK5 Length = 67 Score = 82.4 bits (203), Expect = 4e-15, Method: Composition-based stats. Identities = 43/68 (63%), Positives = 49/68 (72%), Gaps = 2/68 (2%) Query: 4 KMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFR-TLNENQKVEFSIEQGQRGP 62 TG VKWFN++KGFGFI G DVFVHFTAIQSNE R L E QKV+F +E+G +G Sbjct: 1 MKTGTVKWFNSEKGFGFIEVP-GENDVFVHFTAIQSNEARKNLEEGQKVQFDVEEGPKGL 59 Query: 63 AAANVVTL 70 AANVV L Sbjct: 60 QAANVVKL 67 >UniRef50_B4RGZ9 Cold-shock DNA-binding domain protein n=75 Tax=Bacteria RepID=B4RGZ9_PHEZH Length = 250 Score = 82.4 bits (203), Expect = 4e-15, Method: Composition-based stats. Identities = 33/71 (46%), Positives = 44/71 (61%), Gaps = 2/71 (2%) Query: 1 MSNKMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQR 60 + +G VKWFN KGFGFI PDDG +DVFVH +A+ LNE +VE+ +EQ +R Sbjct: 53 LRRMASGTVKWFNTAKGFGFIQPDDGGQDVFVHISAVAQAGLDALNEGDQVEYELEQDRR 112 Query: 61 --GPAAANVVT 69 AA ++V Sbjct: 113 SGKLAATSIVV 123 Score = 76.7 bits (188), Expect = 2e-13, Method: Composition-based stats. Identities = 28/55 (50%), Positives = 39/55 (70%) Query: 6 TGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQR 60 +G+VKWFN KGFGFI P+ G +D+FVH +A++ LNE Q V+F +EQ +R Sbjct: 183 SGVVKWFNPTKGFGFIKPEGGGQDIFVHISAVEQAGLSGLNEGQTVDFDLEQDRR 237 >UniRef50_C4FWF1 Putative uncharacterized protein n=1 Tax=Catonella morbi ATCC 51271 RepID=C4FWF1_9FIRM Length = 90 Score = 82.4 bits (203), Expect = 4e-15, Method: Composition-based stats. Identities = 34/67 (50%), Positives = 45/67 (67%), Gaps = 1/67 (1%) Query: 4 KMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPA 63 + G VK+FN DKGFGFI DG VFVHF+ IQ++ F+TLNE Q V + +++ RG Sbjct: 25 MLNGTVKFFNVDKGFGFIAGQDGVD-VFVHFSNIQADGFKTLNEGQTVSYDVQETSRGLQ 83 Query: 64 AANVVTL 70 A NVV + Sbjct: 84 AINVVAI 90 >UniRef50_Q1J0P4 Cold-shock DNA-binding domain protein n=9 Tax=Bacteria RepID=Q1J0P4_DEIGD Length = 87 Score = 82.0 bits (202), Expect = 5e-15, Method: Composition-based stats. Identities = 38/65 (58%), Positives = 48/65 (73%), Gaps = 3/65 (4%) Query: 7 GLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQ--RGPAA 64 G VKWFNA+KG+GFI + GS+DVF HF+AIQ+ F+ LNE +VEF IE GQ +GP A Sbjct: 4 GKVKWFNAEKGYGFIETE-GSEDVFAHFSAIQAQGFKKLNEGDEVEFEIEPGQRGKGPQA 62 Query: 65 ANVVT 69 N+V Sbjct: 63 RNIVV 67 >UniRef50_D1A5P8 Cold-shock DNA-binding domain protein n=33 Tax=Actinobacteridae RepID=D1A5P8_THECD Length = 135 Score = 82.0 bits (202), Expect = 5e-15, Method: Composition-based stats. Identities = 33/65 (50%), Positives = 45/65 (69%), Gaps = 2/65 (3%) Query: 6 TGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPAAA 65 TG VKW++A KGFGF+T DDG + VFVH +A+ S +L Q+VEF + +G+RG A Sbjct: 7 TGKVKWYDAGKGFGFLTRDDGGE-VFVHSSALPS-GVTSLKTGQRVEFGVVEGRRGQQAL 64 Query: 66 NVVTL 70 +V TL Sbjct: 65 SVRTL 69 >UniRef50_P55390 Probable cold shock protein y4cH n=110 Tax=Proteobacteria RepID=Y4CH_RHISN Length = 69 Score = 81.7 bits (201), Expect = 7e-15, Method: Composition-based stats. Identities = 29/58 (50%), Positives = 39/58 (67%) Query: 3 NKMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQR 60 TG VKWFNA KGFGFI PDDGS DVFVH +A++ R L + QK+ + + + ++ Sbjct: 1 MMATGTVKWFNATKGFGFIQPDDGSADVFVHISAVERAGLRELKDGQKISYELVKDRK 58 >UniRef50_Q0BPU3 Cold shock protein n=2 Tax=Alphaproteobacteria RepID=Q0BPU3_GRABC Length = 100 Score = 81.3 bits (200), Expect = 8e-15, Method: Composition-based stats. Identities = 35/62 (56%), Positives = 43/62 (69%) Query: 4 KMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPA 63 + G VKWFN KG+GFI P G KDVFVH +A+Q R+LNE Q+++F IEQ Q G A Sbjct: 32 MLHGTVKWFNPTKGYGFIAPSTGEKDVFVHISAVQRAGLRSLNEGQQLDFEIEQQQNGRA 91 Query: 64 AA 65 AA Sbjct: 92 AA 93 >UniRef50_B3EP04 Cold-shock DNA-binding domain protein n=13 Tax=Chlorobiaceae RepID=B3EP04_CHLPB Length = 96 Score = 81.3 bits (200), Expect = 1e-14, Method: Composition-based stats. Identities = 35/71 (49%), Positives = 47/71 (66%), Gaps = 3/71 (4%) Query: 1 MSNKMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSN-EFRTLNENQKVEFSIEQGQ 59 MS K VKWF+ KG+GFI DG +D+FVHF+AI S F+ LN++ +VEF I+Q Q Sbjct: 1 MSRKSK--VKWFDGKKGYGFIVNPDGGEDIFVHFSAIVSEQSFKVLNQDAEVEFEIDQTQ 58 Query: 60 RGPAAANVVTL 70 +G A NV + Sbjct: 59 KGMQAKNVCEI 69 >UniRef50_C8WCQ1 Cold-shock DNA-binding domain protein n=18 Tax=Alphaproteobacteria RepID=C8WCQ1_ZYMMN Length = 303 Score = 80.9 bits (199), Expect = 1e-14, Method: Composition-based stats. Identities = 30/63 (47%), Positives = 40/63 (63%) Query: 3 NKMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGP 62 K +G VK+FNA KGFGFI DDG D FVH +A++ +LNE ++ F +E +RG Sbjct: 233 EKSSGTVKFFNAMKGFGFIQRDDGQPDAFVHISAVERAGLPSLNEGDRLSFELEVDRRGK 292 Query: 63 AAA 65 AA Sbjct: 293 YAA 295 Score = 67.8 bits (165), Expect = 1e-10, Method: Composition-based stats. Identities = 26/61 (42%), Positives = 38/61 (62%) Query: 6 TGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPAAA 65 TG+VK+FN+ KGFGF+ DDG +DVFVH +A++ L E Q + F++ +A Sbjct: 137 TGVVKFFNSQKGFGFVVRDDGGEDVFVHISAVEQAGLTGLAEGQPLSFTLVDRGGRVSAT 196 Query: 66 N 66 N Sbjct: 197 N 197 >UniRef50_Q9Z3S6 Cold shock protein cspA n=72 Tax=Bacteria RepID=CSPA_RHIME Length = 69 Score = 80.9 bits (199), Expect = 1e-14, Method: Composition-based stats. Identities = 29/55 (52%), Positives = 39/55 (70%) Query: 6 TGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQR 60 +G VKWFN+ KGFGFI PDDG+ DVFVH +A++ R+L E QKV + I + + Sbjct: 3 SGTVKWFNSTKGFGFIQPDDGATDVFVHASAVERAGMRSLVEGQKVTYDIVRDTK 57 >UniRef50_A8ILK3 Cold shock protein n=9 Tax=Proteobacteria RepID=A8ILK3_AZOC5 Length = 237 Score = 80.9 bits (199), Expect = 1e-14, Method: Composition-based stats. Identities = 28/68 (41%), Positives = 40/68 (58%) Query: 2 SNKMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRG 61 + + G VKW+N +KGFGFI + G KDVFVH T + + L+E Q+V + QG +G Sbjct: 168 TEERVGTVKWYNPEKGFGFIAVEGGGKDVFVHVTVVSRSGLADLSEGQRVVVQVGQGPKG 227 Query: 62 PAAANVVT 69 P A + Sbjct: 228 PEARGIEV 235 Score = 68.2 bits (166), Expect = 7e-11, Method: Composition-based stats. Identities = 24/63 (38%), Positives = 37/63 (58%) Query: 8 LVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPAAANV 67 VKWFN +KGFGF+ DGS DVF+H A+++ ++ K+ + QGQ+G V Sbjct: 69 TVKWFNPEKGFGFVELSDGSGDVFLHARALEAAGQESVPPGSKLSVRVGQGQKGRQVTEV 128 Query: 68 VTL 70 + + Sbjct: 129 LEV 131 >UniRef50_P46449 Cold shock-like protein cspD n=53 Tax=Bacteria RepID=CSPD_HAEIN Length = 72 Score = 80.9 bits (199), Expect = 1e-14, Method: Composition-based stats. Identities = 24/64 (37%), Positives = 40/64 (62%) Query: 7 GLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPAAAN 66 G+VKWFN KGFGFI+ + D+F H++ I+ + +R+L QKV+F + +G A Sbjct: 4 GIVKWFNNAKGFGFISAEGVDADIFAHYSVIEMDGYRSLKAGQKVQFEVLHSDKGSHATK 63 Query: 67 VVTL 70 ++ + Sbjct: 64 IIPI 67 >UniRef50_Q1NG42 Cold shock protein n=3 Tax=Alphaproteobacteria RepID=Q1NG42_9SPHN Length = 153 Score = 80.9 bits (199), Expect = 1e-14, Method: Composition-based stats. Identities = 29/63 (46%), Positives = 40/63 (63%) Query: 3 NKMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGP 62 + +G VK+FNA KGFGFI DDG D FVH +A++ LNE +++F +E +RG Sbjct: 83 ERASGTVKFFNAMKGFGFIQRDDGQPDAFVHISAVERAGMAALNEGDRLDFELEVDRRGK 142 Query: 63 AAA 65 AA Sbjct: 143 YAA 145 >UniRef50_D1BKC9 Cold shock domain protein CspD n=31 Tax=Bacteria RepID=D1BKC9_SANKS Length = 317 Score = 80.5 bits (198), Expect = 1e-14, Method: Composition-based stats. Identities = 30/66 (45%), Positives = 42/66 (63%), Gaps = 2/66 (3%) Query: 6 TGLVKWFNADKGFGFITPDDGSKDVFVHFTAI--QSNEFRTLNENQKVEFSIEQGQRGPA 63 G V+WF+A++GFGF+ DDG+ D+FVH + I + ++L E Q VEF I +G RGP Sbjct: 3 QGTVRWFDAERGFGFLALDDGADDLFVHASEIVGNDDGTQSLREGQSVEFEIGEGDRGPQ 62 Query: 64 AANVVT 69 A V Sbjct: 63 ARRVQI 68 Score = 75.1 bits (184), Expect = 7e-13, Method: Composition-based stats. Identities = 27/63 (42%), Positives = 36/63 (57%), Gaps = 1/63 (1%) Query: 8 LVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPAAANV 67 V W++A KGFGF+TPD G D FVH ++ L E +V FS+ G RGP A +V Sbjct: 164 TVSWYDAGKGFGFVTPDSGEPDAFVHARSLAG-GATELVEGDRVSFSVVPGDRGPQAQDV 222 Query: 68 VTL 70 + Sbjct: 223 RVV 225 Score = 70.1 bits (171), Expect = 2e-11, Method: Composition-based stats. Identities = 23/58 (39%), Positives = 35/58 (60%), Gaps = 2/58 (3%) Query: 7 GLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPAA 64 G V W+ KG+GF+TPD G ++F H +AI + E Q+V F + +G++GP A Sbjct: 82 GTVTWYEPTKGYGFVTPDGGGAEIFAHSSAIVGGGV--IAEGQRVAFLVVEGEKGPQA 137 Score = 69.7 bits (170), Expect = 3e-11, Method: Composition-based stats. Identities = 26/62 (41%), Positives = 38/62 (61%), Gaps = 2/62 (3%) Query: 6 TGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPAAA 65 G+V ++A++GFGFITPD G D+FVH + ++ + L E +V F + Q RGP A Sbjct: 255 EGVVARYDAERGFGFITPDSGGPDLFVHVSVVREG--QELYEGDRVRFQVRQSDRGPQAD 312 Query: 66 NV 67 V Sbjct: 313 RV 314 >UniRef50_Q5YVF2 Putative cold shock protein n=1 Tax=Nocardia farcinica RepID=Q5YVF2_NOCFA Length = 122 Score = 80.5 bits (198), Expect = 1e-14, Method: Composition-based stats. Identities = 31/64 (48%), Positives = 39/64 (60%) Query: 6 TGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPAAA 65 G V WF+A+KGFGFITPDD S VFV F AI++ +RTL V + E+ + GP A Sbjct: 53 HGTVAWFDAEKGFGFITPDDRSPAVFVEFHAIEAVGYRTLVAGGPVVYRAEETKAGPEAV 112 Query: 66 NVVT 69 V Sbjct: 113 AVRP 116 >UniRef50_Q5JKD6 Cold shock domain protein 2-like protein n=1 Tax=Oryza sativa Japonica Group RepID=Q5JKD6_ORYSJ Length = 221 Score = 80.5 bits (198), Expect = 1e-14, Method: Composition-based stats. Identities = 27/70 (38%), Positives = 47/70 (67%), Gaps = 1/70 (1%) Query: 1 MSNKMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQR 60 +S ++ G+VK F+A GF FITPDDGS+D+F+H ++++ + +R+LN++ +E S+ Sbjct: 2 VSERVKGMVKGFDATNGFSFITPDDGSEDLFIHQSSLKFDGYRSLNDDDVIELSVGSSDD 61 Query: 61 GP-AAANVVT 69 G A +V Sbjct: 62 GRTKAVDVTA 71 >UniRef50_Q23960 Y-box protein n=1 Tax=Dugesia japonica RepID=Q23960_DUGJA Length = 266 Score = 80.5 bits (198), Expect = 2e-14, Method: Composition-based stats. Identities = 25/70 (35%), Positives = 44/70 (62%), Gaps = 4/70 (5%) Query: 5 MTGLVKWFNADKGFGFITPDDGSKDVFVHFTAI----QSNEFRTLNENQKVEFSIEQGQR 60 +TG VKWFN +G+GF+ +D +D+F+H +AI + +++ E +++ F I +G + Sbjct: 29 ITGKVKWFNVKRGYGFVCRNDNQEDIFIHQSAIVKSNPDHPRKSVGEGEEILFDIVKGAK 88 Query: 61 GPAAANVVTL 70 G AANV + Sbjct: 89 GNEAANVSAI 98 >UniRef50_Q2S3Y3 'Cold-shock' DNA-binding domain, putative n=1 Tax=Salinibacter ruber DSM 13855 RepID=Q2S3Y3_SALRD Length = 69 Score = 80.1 bits (197), Expect = 2e-14, Method: Composition-based stats. Identities = 26/65 (40%), Positives = 40/65 (61%), Gaps = 3/65 (4%) Query: 6 TGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPAAA 65 TG VKWF+ +G+GF+ PD+G DVF+H + + L E ++EF IE+ ++G A Sbjct: 3 TGTVKWFSPAEGYGFVEPDNGEDDVFLHHSEVPDE---DLEEGDRLEFEIEETEKGLNAV 59 Query: 66 NVVTL 70 N+ L Sbjct: 60 NIEAL 64 >UniRef50_P92186 Protein lin-28 n=5 Tax=Caenorhabditis RepID=LIN28_CAEEL Length = 227 Score = 80.1 bits (197), Expect = 2e-14, Method: Composition-based stats. Identities = 23/68 (33%), Positives = 39/68 (57%), Gaps = 2/68 (2%) Query: 2 SNKMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQ--GQ 59 + + G KWFN KG+GF+ D +D+FVH + + FR+L+E ++V + I++ Sbjct: 50 TPRYFGSCKWFNVSKGYGFVIDDITGEDLFVHQSNLNMQGFRSLDEGERVSYYIQERSNG 109 Query: 60 RGPAAANV 67 +G A V Sbjct: 110 KGREAYAV 117 >UniRef50_D1AYL8 Cold-shock DNA-binding domain protein n=3 Tax=cellular organisms RepID=D1AYL8_STRM9 Length = 65 Score = 80.1 bits (197), Expect = 2e-14, Method: Composition-based stats. Identities = 37/64 (57%), Positives = 47/64 (73%), Gaps = 1/64 (1%) Query: 5 MTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPAA 64 M G VKWFN KGFGFI+ +DG KD F+HF+ I F+T+NE ++VEF IE G++GP A Sbjct: 1 MLGKVKWFNEKKGFGFISGEDG-KDYFLHFSKINKGGFKTVNEGEEVEFDIEDGEKGPQA 59 Query: 65 ANVV 68 NVV Sbjct: 60 TNVV 63 >UniRef50_A5VRP5 Cold-shock family protein n=37 Tax=Brucellaceae RepID=A5VRP5_BRUO2 Length = 83 Score = 80.1 bits (197), Expect = 2e-14, Method: Composition-based stats. Identities = 32/66 (48%), Positives = 44/66 (66%), Gaps = 2/66 (3%) Query: 6 TGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQ--RGPA 63 TG VK+FN +KGFGFI PDDG D+FVH +A+Q++ L +NQKV + E + +GP Sbjct: 16 TGQVKFFNTEKGFGFIKPDDGGADIFVHISAVQASGLPGLADNQKVSYETEPDRRGKGPK 75 Query: 64 AANVVT 69 A N+ Sbjct: 76 AVNITI 81 >UniRef50_Q4H2L8 Y-box protein 1/2/3 n=2 Tax=Ciona intestinalis RepID=Q4H2L8_CIOIN Length = 320 Score = 79.7 bits (196), Expect = 2e-14, Method: Composition-based stats. Identities = 30/73 (41%), Positives = 47/73 (64%), Gaps = 5/73 (6%) Query: 1 MSNKMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEF----RTLNENQKVEFSIE 56 +++ +G+VKWFN G+GF+ DD +DVF+H TAI N R++ + + VEF + Sbjct: 22 LASHCSGVVKWFNVRNGYGFVNRDDNKEDVFIHQTAIIKNNPKKYLRSVGDGENVEFDVV 81 Query: 57 QGQRG-PAAANVV 68 +G++G P AANV Sbjct: 82 EGEKGLPEAANVT 94 >UniRef50_C1E859 Cold-shock protein with RNA binding domain n=2 Tax=Micromonas RepID=C1E859_9CHLO Length = 305 Score = 79.4 bits (195), Expect = 3e-14, Method: Composition-based stats. Identities = 31/66 (46%), Positives = 39/66 (59%), Gaps = 1/66 (1%) Query: 4 KMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGP- 62 K G+V WFN KGFGF+T DDG DVFVH + I + FR+L + + VEF +E G Sbjct: 43 KYKGVVNWFNVAKGFGFVTRDDGVGDVFVHQSDIYAEGFRSLRDQEPVEFELEPMGDGRY 102 Query: 63 AAANVV 68 A V Sbjct: 103 KAVKVT 108 >UniRef50_A5V9E9 Cold-shock DNA-binding protein family n=2 Tax=cellular organisms RepID=A5V9E9_SPHWW Length = 198 Score = 79.4 bits (195), Expect = 3e-14, Method: Composition-based stats. Identities = 24/69 (34%), Positives = 38/69 (55%) Query: 2 SNKMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRG 61 + + G VKWF+A +GFGFI D DV VHF+ ++ + RTL E ++ + RG Sbjct: 31 AETVVGAVKWFDATRGFGFIATDGDRGDVLVHFSVLRDHGRRTLPEGARIACEVVARDRG 90 Query: 62 PAAANVVTL 70 A ++ + Sbjct: 91 LQARRILAI 99 Score = 57.4 bits (138), Expect = 1e-07, Method: Composition-based stats. Identities = 19/61 (31%), Positives = 36/61 (59%) Query: 8 LVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPAAANV 67 +VKWFN KG+GF+ D ++D+F+H ++ L +++ I +G++GP A + Sbjct: 136 IVKWFNRLKGYGFLVRDGETQDIFIHMETVRRAGLPDLLPETRMKARIAEGRKGPLAVEL 195 Query: 68 V 68 + Sbjct: 196 I 196 >UniRef50_B6IXJ6 Cold shock-like protein CspA n=1 Tax=Rhodospirillum centenum SW RepID=B6IXJ6_RHOCS Length = 199 Score = 79.4 bits (195), Expect = 3e-14, Method: Composition-based stats. Identities = 26/67 (38%), Positives = 39/67 (58%) Query: 4 KMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPA 63 ++ G VKWF DKGFGF+T DDG KDVFVH + ++ +L ++V + + +G Sbjct: 132 ELEGSVKWFKDDKGFGFVTTDDGGKDVFVHKSILRRAGLESLQSGERVLMRVTEAPKGRE 191 Query: 64 AANVVTL 70 A + L Sbjct: 192 ATWIQLL 198 Score = 65.9 bits (160), Expect = 4e-10, Method: Composition-based stats. Identities = 24/63 (38%), Positives = 33/63 (52%) Query: 8 LVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPAAANV 67 VKWFN KGFGF+ P DG+ D F+H + + L E +V I G +GP + Sbjct: 46 TVKWFNGVKGFGFVAPADGTPDAFLHASVLSRVGLSDLAEGAEVMVVIGPGPKGPQVIRL 105 Query: 68 VTL 70 V + Sbjct: 106 VDV 108 >UniRef50_P91306 Y-box protein 2 n=6 Tax=Caenorhabditis RepID=P91306_CAEEL Length = 267 Score = 79.0 bits (194), Expect = 4e-14, Method: Composition-based stats. Identities = 29/73 (39%), Positives = 47/73 (64%), Gaps = 5/73 (6%) Query: 1 MSNKMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNE-----FRTLNENQKVEFSI 55 ++ + G VKW++ + +GFI+ +DG KD+FVH TAI + RTL ++++V F + Sbjct: 62 ITTGLQGKVKWYSVLRRYGFISRNDGEKDIFVHQTAIAKSATEKFYLRTLGDDEEVLFDL 121 Query: 56 EQGQRGPAAANVV 68 +G+ GP AANV Sbjct: 122 VEGKNGPEAANVT 134 >UniRef50_B6QZ94 Cold-shock DNA-binding domain protein n=1 Tax=Pseudovibrio sp. JE062 RepID=B6QZ94_9RHOB Length = 215 Score = 79.0 bits (194), Expect = 4e-14, Method: Composition-based stats. Identities = 29/68 (42%), Positives = 43/68 (63%), Gaps = 2/68 (2%) Query: 4 KMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQ--RG 61 + +G VK+F DKGFGFITPD+G DVFVH +A++ + TL+ Q++ F E + +G Sbjct: 121 RQSGTVKFFKLDKGFGFITPDEGENDVFVHISAVERSGLTTLDSGQRISFETEPDRRGKG 180 Query: 62 PAAANVVT 69 P A + Sbjct: 181 PKAVELRL 188 >UniRef50_B1MZK9 Cold shock protein n=15 Tax=Bacteria RepID=B1MZK9_LEUCK Length = 74 Score = 79.0 bits (194), Expect = 5e-14, Method: Composition-based stats. Identities = 28/67 (41%), Positives = 42/67 (62%) Query: 4 KMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPA 63 TG+VK + ++G+G+ITPD G +DVFVHF I F+ L + +KV + + QG + P Sbjct: 1 MKTGIVKIWQKERGYGYITPDAGGEDVFVHFNGIDMPGFKALKQGEKVSYVLVQGYKAPQ 60 Query: 64 AANVVTL 70 AA V + Sbjct: 61 AAQVQPI 67 >UniRef50_B1Z823 Cold-shock DNA-binding domain protein n=34 Tax=Alphaproteobacteria RepID=B1Z823_METPB Length = 69 Score = 78.6 bits (193), Expect = 5e-14, Method: Composition-based stats. Identities = 31/61 (50%), Positives = 40/61 (65%), Gaps = 1/61 (1%) Query: 6 TGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQR-GPAA 64 TG VKWFN KG+GFI PD+G KDVFVH +A++ R L E QK+ + + +R G A Sbjct: 3 TGTVKWFNETKGYGFIQPDNGGKDVFVHISAVERAGLRNLVEGQKISYEVLTDKRSGKDA 62 Query: 65 A 65 A Sbjct: 63 A 63 >UniRef50_A8PLB9 'Cold-shock' DNA-binding domain containing protein n=1 Tax=Brugia malayi RepID=A8PLB9_BRUMA Length = 205 Score = 78.6 bits (193), Expect = 6e-14, Method: Composition-based stats. Identities = 29/70 (41%), Positives = 39/70 (55%), Gaps = 8/70 (11%) Query: 7 GLVKWFNADKGFGFITPDDGSKDVFVH--------FTAIQSNEFRTLNENQKVEFSIEQG 58 G KWFN KG+GFITPD+G DVFVH + + + FR+L+ ++V F I + Sbjct: 11 GTCKWFNVLKGYGFITPDEGGDDVFVHQASGVFFIQSELNMDGFRSLDAGERVRFVIRRR 70 Query: 59 QRGPAAANVV 68 G A VV Sbjct: 71 PEGNEATAVV 80 >UniRef50_A3VSH0 Cold shock protein n=1 Tax=Parvularcula bermudensis HTCC2503 RepID=A3VSH0_9PROT Length = 173 Score = 78.2 bits (192), Expect = 7e-14, Method: Composition-based stats. Identities = 22/69 (31%), Positives = 38/69 (55%) Query: 2 SNKMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRG 61 S ++ G VKWF+ KG+GFIT + G +DV +H + ++ + T E V + ++G Sbjct: 11 SREIRGFVKWFDQTKGYGFITDEAGGRDVLIHSSCLKQSGRATAPEGAIVTCEAIESEKG 70 Query: 62 PAAANVVTL 70 A ++ L Sbjct: 71 LQATRIINL 79 Score = 64.3 bits (156), Expect = 1e-09, Method: Composition-based stats. Identities = 20/62 (32%), Positives = 35/62 (56%) Query: 8 LVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPAAANV 67 VKWF+ KG+GF+T + ++D+FVH +++ L Q++ S +G +G AA + Sbjct: 108 TVKWFSRAKGYGFLTATNANEDIFVHMEVVRAAGLSELQPGQRLRASYGRGTKGLLAAAI 167 Query: 68 VT 69 Sbjct: 168 EP 169 >UniRef50_A3YF52 Cold-shock protein, DNA-binding n=2 Tax=Marinomonas RepID=A3YF52_9GAMM Length = 79 Score = 78.2 bits (192), Expect = 7e-14, Method: Composition-based stats. Identities = 30/67 (44%), Positives = 40/67 (59%), Gaps = 1/67 (1%) Query: 1 MSNKMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQR 60 M++K+ G VKWFN KG GFI D+ DVFVH+ +I S +TL + Q V F I + Sbjct: 1 MTDKLKGTVKWFNDSKGVGFIQRDN-EADVFVHYKSIVSEGHKTLKKGQAVSFFITENDF 59 Query: 61 GPAAANV 67 G A+ V Sbjct: 60 GRQASEV 66 >UniRef50_A4TN10 Cold-shock DNA-binding protein family n=35 Tax=Enterobacteriaceae RepID=A4TN10_YERPP Length = 69 Score = 78.2 bits (192), Expect = 7e-14, Method: Composition-based stats. Identities = 35/70 (50%), Positives = 49/70 (70%), Gaps = 1/70 (1%) Query: 1 MSNKMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQR 60 M+ KM G VKWFN +G+GFI+P DG DV+V+ TAI + + ++LNE Q VEFS + Sbjct: 1 MTLKM-GRVKWFNQSEGYGFISPHDGGSDVYVNKTAIANTKNKSLNEGQDVEFSTYRSIH 59 Query: 61 GPAAANVVTL 70 GP+AA+V+ Sbjct: 60 GPSAADVIAF 69 >UniRef50_B9JZ17 Cold shock protein n=106 Tax=Alphaproteobacteria RepID=B9JZ17_AGRVS Length = 71 Score = 77.8 bits (191), Expect = 8e-14, Method: Composition-based stats. Identities = 34/66 (51%), Positives = 46/66 (69%), Gaps = 2/66 (3%) Query: 6 TGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQ--RGPA 63 TG+VK+FN DKGFGFI PD+G D+FVH +A+Q++ L+ENQKV F E + +GP Sbjct: 4 TGIVKFFNNDKGFGFIKPDNGGADIFVHISAVQASGLNGLSENQKVSFDTEPDRRGKGPK 63 Query: 64 AANVVT 69 A N+ Sbjct: 64 AVNLQI 69 >UniRef50_B9T6D3 Cellular nucleic acid binding protein, putative n=1 Tax=Ricinus communis RepID=B9T6D3_RICCO Length = 266 Score = 77.8 bits (191), Expect = 9e-14, Method: Composition-based stats. Identities = 28/68 (41%), Positives = 41/68 (60%), Gaps = 2/68 (2%) Query: 4 KMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNE-FRTLNENQKVEFSIE-QGQRG 61 + G V F+ KGFGFI PDDG +D+FVH +AI+S+ +R+L E+ VEF++ Sbjct: 13 RSRGKVVRFSDRKGFGFIKPDDGGEDLFVHHSAIKSDGRYRSLAEDDVVEFTVSLSDDNK 72 Query: 62 PAAANVVT 69 A +V Sbjct: 73 YQAVDVTA 80 >UniRef50_Q4SGH3 Chromosome undetermined SCAF14594, whole genome shotgun sequence. (Fragment) n=1 Tax=Tetraodon nigroviridis RepID=Q4SGH3_TETNG Length = 179 Score = 77.8 bits (191), Expect = 1e-13, Method: Composition-based stats. Identities = 27/69 (39%), Positives = 39/69 (56%), Gaps = 7/69 (10%) Query: 6 TGLVKWFNADKGFGFIT-------PDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQG 58 +G+ KWFN GFGFI+ P D + DVFVH + + FR+L E + +EFS ++ Sbjct: 5 SGVCKWFNMRMGFGFISMSSRDGAPLDQNLDVFVHQSKLHMEGFRSLREGEALEFSFKKS 64 Query: 59 QRGPAAANV 67 +G A V Sbjct: 65 SKGLEAVRV 73 >UniRef50_Q475L4 Cold-shock DNA-binding protein family n=1 Tax=Ralstonia eutropha JMP134 RepID=Q475L4_RALEJ Length = 195 Score = 77.8 bits (191), Expect = 1e-13, Method: Composition-based stats. Identities = 23/70 (32%), Positives = 36/70 (51%), Gaps = 2/70 (2%) Query: 1 MSNKMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQR 60 M+ +++G +K +N DKGFGFI P +G +D+FVH + + + F + Q Sbjct: 8 MNTRISGTLKSWNKDKGFGFIAPSNGGRDIFVHISDYPRQG-GMPKIGESLTFLVTLNQD 66 Query: 61 GP-AAANVVT 69 G A NV Sbjct: 67 GKNKAINVQR 76 >UniRef50_A0Z255 Cold shock protein, CspA family-like protein n=1 Tax=marine gamma proteobacterium HTCC2080 RepID=A0Z255_9GAMM Length = 138 Score = 77.8 bits (191), Expect = 1e-13, Method: Composition-based stats. Identities = 28/65 (43%), Positives = 41/65 (63%), Gaps = 1/65 (1%) Query: 6 TGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPAAA 65 G +KWFNA KGFGFI DDG++ VFVH+ ++ R++ + Q+V +S+ RGP A Sbjct: 75 EGNIKWFNATKGFGFIVGDDGAE-VFVHYRNVEGLTKRSIKQGQRVAYSVRASDRGPQAE 133 Query: 66 NVVTL 70 V + Sbjct: 134 GVKAV 138 >UniRef50_B3DPK3 Cold shock protein n=7 Tax=Bifidobacterium RepID=B3DPK3_BIFLD Length = 79 Score = 77.8 bits (191), Expect = 1e-13, Method: Composition-based stats. Identities = 31/71 (43%), Positives = 42/71 (59%), Gaps = 4/71 (5%) Query: 4 KMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNE----FRTLNENQKVEFSIEQGQ 59 G VK+F A KGFGFI PDDG +DVFVH+ I+ + F+ L E +VE++ Sbjct: 1 MAQGTVKFFLAKKGFGFIQPDDGGEDVFVHYAEIKDDGSTNKFKMLYEGDRVEYTPASSG 60 Query: 60 RGPAAANVVTL 70 +G A +VV L Sbjct: 61 KGTQAKDVVKL 71 >UniRef50_B9MXF4 Predicted protein n=2 Tax=Populus trichocarpa RepID=B9MXF4_POPTR Length = 235 Score = 77.4 bits (190), Expect = 1e-13, Method: Composition-based stats. Identities = 31/68 (45%), Positives = 41/68 (60%), Gaps = 1/68 (1%) Query: 3 NKMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSN-EFRTLNENQKVEFSIEQGQRG 61 + TG V F+ KGFGFI PD G KD+FVH +AI+S+ +RTL E+ VEF+I Sbjct: 12 ERSTGRVVRFSDKKGFGFIKPDAGDKDLFVHHSAIKSDGGYRTLYEDDVVEFTILLNDDK 71 Query: 62 PAAANVVT 69 A +V Sbjct: 72 YQAVDVTA 79 >UniRef50_A0ACJ4 Putative DNA-binding protein n=2 Tax=Streptomyces RepID=A0ACJ4_STRAM Length = 172 Score = 77.4 bits (190), Expect = 1e-13, Method: Composition-based stats. Identities = 25/63 (39%), Positives = 38/63 (60%), Gaps = 1/63 (1%) Query: 7 GLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPAAAN 66 G + F+ +G+GFI PD+G +DVF+H + ++ R L KVEF +E+G RG A+ Sbjct: 9 GKIIRFDEFRGYGFIAPDNGGEDVFIHVNDLAFDK-RLLGPGMKVEFDVEEGDRGLKASR 67 Query: 67 VVT 69 V Sbjct: 68 VRI 70 >UniRef50_Q6ZN17 Protein lin-28 homolog B n=13 Tax=Tetrapoda RepID=LN28B_HUMAN Length = 250 Score = 77.4 bits (190), Expect = 1e-13, Method: Composition-based stats. Identities = 27/72 (37%), Positives = 38/72 (52%), Gaps = 7/72 (9%) Query: 4 KMTGLVKWFNADKGFGFIT-------PDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIE 56 + TG KWFN GFGFI+ P D DVFVH + + FR+L E + VEF+ + Sbjct: 29 RGTGHCKWFNVRMGFGFISMINREGSPLDIPVDVFVHQSKLFMEGFRSLKEGEPVEFTFK 88 Query: 57 QGQRGPAAANVV 68 + +G + V Sbjct: 89 KSSKGLESIRVT 100 >UniRef50_UPI0000589074 PREDICTED: similar to ENSANGP00000011455 n=1 Tax=Strongylocentrotus purpuratus RepID=UPI0000589074 Length = 234 Score = 77.0 bits (189), Expect = 1e-13, Method: Composition-based stats. Identities = 27/66 (40%), Positives = 41/66 (62%) Query: 5 MTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPAA 64 G KWF+ K +GF+TPDDGS DVFVH I+ +R+L+ N++VE+ + ++G A Sbjct: 63 YRGKCKWFSLAKCYGFLTPDDGSGDVFVHQRVIKMVGYRSLDTNEEVEYKFQFSEKGREA 122 Query: 65 ANVVTL 70 V + Sbjct: 123 TTVTGV 128 >UniRef50_Q4UBG6 Cold shock protein, putative n=2 Tax=Theileria RepID=Q4UBG6_THEAN Length = 95 Score = 77.0 bits (189), Expect = 2e-13, Method: Composition-based stats. Identities = 28/66 (42%), Positives = 43/66 (65%), Gaps = 1/66 (1%) Query: 3 NKMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGP 62 ++ G+ KWFN KG+GFIT ++G +DVFVH + I ++ FR+L+EN+KVE + Sbjct: 2 TRLNGVCKWFNNKKGYGFITLENG-EDVFVHQSEIYADGFRSLHENEKVELEVIMDNNRK 60 Query: 63 AAANVV 68 A +V Sbjct: 61 KAIHVT 66 >UniRef50_Q2W0B3 Cold shock protein n=3 Tax=Magnetospirillum RepID=Q2W0B3_MAGSA Length = 200 Score = 77.0 bits (189), Expect = 2e-13, Method: Composition-based stats. Identities = 28/69 (40%), Positives = 43/69 (62%) Query: 2 SNKMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRG 61 + + G+VK+F+A+KGFGF+ D G KDVFVH A++ + +TL Q+V + G +G Sbjct: 132 TETVEGVVKFFSAEKGFGFVACDQGGKDVFVHVKALERSGIKTLESGQRVRVTTTLGLKG 191 Query: 62 PAAANVVTL 70 P A V + Sbjct: 192 PQADTVAII 200 Score = 66.6 bits (162), Expect = 2e-10, Method: Composition-based stats. Identities = 26/66 (39%), Positives = 37/66 (56%) Query: 5 MTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPAA 64 ++ VKWFNA KGFGF+ P DGS D F+H +A++ + E + + GQRGP Sbjct: 49 VSATVKWFNASKGFGFVAPSDGSPDAFLHISALERAGLTQVAEGATLVVDLGAGQRGPQV 108 Query: 65 ANVVTL 70 V + Sbjct: 109 VMVHEV 114 >UniRef50_A4FKV9 Putative DNA-binding protein n=1 Tax=Saccharopolyspora erythraea NRRL 2338 RepID=A4FKV9_SACEN Length = 150 Score = 77.0 bits (189), Expect = 2e-13, Method: Composition-based stats. Identities = 25/67 (37%), Positives = 33/67 (49%) Query: 4 KMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPA 63 TG V F+ KG+GFI PD G +DVF+H + + L +VEF G +G Sbjct: 1 MKTGTVVRFDGIKGYGFIAPDAGGEDVFLHASILDEELKEVLRGGMRVEFEAVPGNQGTK 60 Query: 64 AANVVTL 70 A V L Sbjct: 61 AMTVNLL 67 >UniRef50_B9KKC8 Cold-shock DNA-binding protein family n=21 Tax=Rhodobacteraceae RepID=B9KKC8_RHOSK Length = 83 Score = 76.3 bits (187), Expect = 3e-13, Method: Composition-based stats. Identities = 32/66 (48%), Positives = 47/66 (71%), Gaps = 1/66 (1%) Query: 6 TGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGP-AA 64 TG VKWFN+ KGFGFI PDDG KDVFVH +A++ + L++NQK+ + ++ G+ G +A Sbjct: 18 TGTVKWFNSTKGFGFIAPDDGGKDVFVHISAVERAGLKGLSDNQKIGYELQSGRDGRSSA 77 Query: 65 ANVVTL 70 ++ L Sbjct: 78 GDLRLL 83 >UniRef50_Q1RHK6 Cold shock-like protein cspA n=15 Tax=Rickettsia RepID=CSPA_RICBR Length = 70 Score = 76.3 bits (187), Expect = 3e-13, Method: Composition-based stats. Identities = 29/69 (42%), Positives = 39/69 (56%) Query: 1 MSNKMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQR 60 M+ + G VKWFN K FGFI ++G KDVFVH +A+ + LNE Q V F +E Sbjct: 1 MTTNIVGKVKWFNPTKNFGFIEQENGGKDVFVHRSAVDAAGLAGLNEGQDVIFDLEDKNG 60 Query: 61 GPAAANVVT 69 +A N+ Sbjct: 61 KISAVNLRI 69 >UniRef50_A9AXX4 Cold-shock DNA-binding domain protein n=1 Tax=Herpetosiphon aurantiacus ATCC 23779 RepID=A9AXX4_HERA2 Length = 197 Score = 76.3 bits (187), Expect = 3e-13, Method: Composition-based stats. Identities = 25/69 (36%), Positives = 40/69 (57%), Gaps = 2/69 (2%) Query: 1 MSNKMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQR 60 M+ + TG V WF+ +K +GFIT G +FVH A+ + R L E ++V F + +G + Sbjct: 1 MNERSTGTVAWFDPEKSYGFITTHAG-ASLFVHRRAL-GDGRRWLVEGEEVSFVVVRGMK 58 Query: 61 GPAAANVVT 69 G A +V+ Sbjct: 59 GDEANDVLV 67 >UniRef50_Q1AWL7 Cold-shock DNA-binding protein family n=2 Tax=cellular organisms RepID=Q1AWL7_RUBXD Length = 197 Score = 75.9 bits (186), Expect = 4e-13, Method: Composition-based stats. Identities = 24/69 (34%), Positives = 42/69 (60%), Gaps = 2/69 (2%) Query: 2 SNKMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRG 61 S + G VKWF+ +KG+GF+ G +D+FVH + ++ + +L + +VE+ + + +RG Sbjct: 131 SQREQGRVKWFDPEKGYGFLVRP-GGEDLFVHHSEVEGD-ASSLGQGVEVEYEVGRNERG 188 Query: 62 PAAANVVTL 70 P A V L Sbjct: 189 PNARRVRVL 197 >UniRef50_Q9EZJ7 Cold shock-like protein CspE (Fragment) n=1 Tax=Brucella abortus RepID=Q9EZJ7_BRUAB Length = 121 Score = 75.5 bits (185), Expect = 4e-13, Method: Composition-based stats. Identities = 23/70 (32%), Positives = 41/70 (58%), Gaps = 1/70 (1%) Query: 2 SNKMTGLVKWFNADKGFGFITPDDGS-KDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQR 60 S K++G +KWF+ KG+GFI PD D+ +H T+++ + F+T E ++ + G R Sbjct: 23 SLKVSGHIKWFDVAKGYGFIVPDQPGLTDILLHVTSLRRDGFQTALEGARIVCEVRHGDR 82 Query: 61 GPAAANVVTL 70 G V+++ Sbjct: 83 GLQCFRVLSM 92 >UniRef50_Q0VN88 Cold-shock domain family protein n=2 Tax=Alcanivorax RepID=Q0VN88_ALCBS Length = 76 Score = 75.5 bits (185), Expect = 4e-13, Method: Composition-based stats. Identities = 30/62 (48%), Positives = 37/62 (59%), Gaps = 1/62 (1%) Query: 6 TGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPAAA 65 G VKWFN +KGFGFI D G +++FVHF A+Q+ R+L KV F RG A Sbjct: 12 RGEVKWFNPNKGFGFILTDSG-EELFVHFKAVQNGGRRSLRTGTKVRFDTRMSDRGEQAD 70 Query: 66 NV 67 NV Sbjct: 71 NV 72 >UniRef50_B0T8T3 Cold-shock DNA-binding domain protein n=40 Tax=Bacteria RepID=B0T8T3_CAUSK Length = 179 Score = 75.5 bits (185), Expect = 4e-13, Method: Composition-based stats. Identities = 27/54 (50%), Positives = 38/54 (70%) Query: 7 GLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQR 60 G+VKWFN KGFGFI P+DG +DVFVH A++ + LNE +V + +E+ +R Sbjct: 4 GVVKWFNPAKGFGFIQPEDGGQDVFVHIAAVERSGLSGLNEGDQVTYEMEEDRR 57 Score = 75.1 bits (184), Expect = 6e-13, Method: Composition-based stats. Identities = 31/65 (47%), Positives = 44/65 (67%), Gaps = 2/65 (3%) Query: 8 LVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQR--GPAAA 65 +VKWFN+ KGFGFI PD+G D+FVH +A++ R LNE Q+V + +EQ +R +A Sbjct: 115 VVKWFNSTKGFGFIQPDNGGGDIFVHISAVERAGLRGLNEGQQVGYELEQDRRSGKTSAG 174 Query: 66 NVVTL 70 N+ L Sbjct: 175 NLRIL 179 >UniRef50_C8SGB1 Cold-shock DNA-binding domain protein n=4 Tax=Mesorhizobium RepID=C8SGB1_9RHIZ Length = 199 Score = 75.5 bits (185), Expect = 5e-13, Method: Composition-based stats. Identities = 26/65 (40%), Positives = 36/65 (55%) Query: 6 TGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPAAA 65 G VKW++ KGFGFI P+ G KD FVH TA+ + L E Q V QG++G Sbjct: 135 EGTVKWYDPQKGFGFIAPNKGEKDAFVHATALTRSGISELLEGQMVLVECGQGKKGLEVL 194 Query: 66 NVVTL 70 ++ + Sbjct: 195 SIRLV 199 Score = 50.1 bits (119), Expect = 2e-05, Method: Composition-based stats. Identities = 19/62 (30%), Positives = 35/62 (56%), Gaps = 1/62 (1%) Query: 9 VKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPAAANVV 68 V WFNA KGFGF+ DG++ ++ ++++ R + E +++ +IE+ RG V Sbjct: 47 VMWFNAGKGFGFVKLLDGTE-AYLPVRVLEASGTRDVCEGTRLKVTIEERPRGHQVTKVR 105 Query: 69 TL 70 + Sbjct: 106 EI 107 >UniRef50_Q607Y7 Cold-shock DNA-binding domain protein n=1 Tax=Methylococcus capsulatus RepID=Q607Y7_METCA Length = 305 Score = 75.5 bits (185), Expect = 5e-13, Method: Composition-based stats. Identities = 22/67 (32%), Positives = 37/67 (55%) Query: 4 KMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPA 63 +++G V F +KGFGFITPD+G + F H + + E + ++ F+ + +G A Sbjct: 236 EISGTVLSFFHEKGFGFITPDNGGDNFFFHVSDLTGIEASDVCAGLRISFNAGRNDKGLA 295 Query: 64 AANVVTL 70 A N+ L Sbjct: 296 AHNIRKL 302 >UniRef50_B4SFC0 Cold-shock DNA-binding domain protein n=1 Tax=Pelodictyon phaeoclathratiforme BU-1 RepID=B4SFC0_PELPB Length = 74 Score = 75.1 bits (184), Expect = 7e-13, Method: Composition-based stats. Identities = 31/65 (47%), Positives = 40/65 (61%) Query: 6 TGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPAAA 65 TG VKWFN KGFGFI PD+G DVFVH ++ + TLNE KV++ + + AA Sbjct: 9 TGTVKWFNKMKGFGFIIPDNGGADVFVHINELEKSGLATLNEADKVKYDMVEKNGKVAAG 68 Query: 66 NVVTL 70 N+ L Sbjct: 69 NIQLL 73 >UniRef50_A4V6J7 Y-Box factor protein (Fragment) n=1 Tax=Dugesia japonica RepID=A4V6J7_DUGJA Length = 178 Score = 74.7 bits (183), Expect = 7e-13, Method: Composition-based stats. Identities = 28/65 (43%), Positives = 40/65 (61%), Gaps = 3/65 (4%) Query: 7 GLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEF---RTLNENQKVEFSIEQGQRGPA 63 G VKW+N KG+GFI DD +DVFVH +AI + ++L E++ V F + +G +G Sbjct: 5 GKVKWYNVKKGYGFIHRDDVDEDVFVHQSAISRCQPGKQKSLGEDEDVLFDVVKGSKGNE 64 Query: 64 AANVV 68 A NV Sbjct: 65 AMNVT 69 >UniRef50_B0VIQ0 Cold-shock domain family protein n=2 Tax=Bacteria RepID=B0VIQ0_9BACT Length = 74 Score = 74.7 bits (183), Expect = 7e-13, Method: Composition-based stats. Identities = 28/73 (38%), Positives = 44/73 (60%), Gaps = 4/73 (5%) Query: 1 MSNKMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLN---ENQKVEFSIEQ 57 M M G VKWFN +KG+GFI DD +K+ FVH+ +I +N R L +++ V F + + Sbjct: 1 MRFNMKGKVKWFNKNKGYGFIITDD-NKEYFVHWKSIVTNSPRELKVLEQDELVTFDLME 59 Query: 58 GQRGPAAANVVTL 70 +G A N++ + Sbjct: 60 TDKGIQAINIIRV 72 >UniRef50_A7BYF1 Putative uncharacterized protein n=1 Tax=Beggiatoa sp. PS RepID=A7BYF1_9GAMM Length = 189 Score = 74.7 bits (183), Expect = 8e-13, Method: Composition-based stats. Identities = 29/65 (44%), Positives = 40/65 (61%), Gaps = 2/65 (3%) Query: 5 MTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPAA 64 M G+V F+ +GFGFI D S+DVFVH I+ ++L+ QKVEF EQ +G +A Sbjct: 1 MEGIVVKFDKKRGFGFIRSDKFSEDVFVHLKNIREQ--QSLSPGQKVEFDTEQTDKGLSA 58 Query: 65 ANVVT 69 NV+ Sbjct: 59 INVIP 63 >UniRef50_Q127M7 Cold-shock DNA-binding protein family n=2 Tax=Betaproteobacteria RepID=Q127M7_POLSJ Length = 193 Score = 74.7 bits (183), Expect = 9e-13, Method: Composition-based stats. Identities = 19/70 (27%), Positives = 36/70 (51%), Gaps = 2/70 (2%) Query: 1 MSNKMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQR 60 ++ + G +K +NA++G GFI D G +++FVH +A + R + + F +E + Sbjct: 4 LTMRFDGTLKKWNAERGLGFIVADQGGQEIFVHISAFPRDG-RLPAVGEPLSFEVEPDRD 62 Query: 61 GPA-AANVVT 69 G A + Sbjct: 63 GKKCAVRIHR 72 >UniRef50_D2H5S2 Putative uncharacterized protein (Fragment) n=2 Tax=Caniformia RepID=D2H5S2_AILME Length = 276 Score = 74.3 bits (182), Expect = 9e-13, Method: Composition-based stats. Identities = 27/70 (38%), Positives = 37/70 (52%), Gaps = 7/70 (10%) Query: 6 TGLVKWFNADKGFGFIT-------PDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQG 58 TG KWFN GFGFI+ P D DVFVH + + FR+L E + VEF+ ++ Sbjct: 57 TGHCKWFNVRMGFGFISMINREGSPLDIPVDVFVHQSKLFMEGFRSLKEGEPVEFTFKKS 116 Query: 59 QRGPAAANVV 68 +G + V Sbjct: 117 SKGLESIRVT 126 >UniRef50_B6KPP5 Glycine-rich protein 2, putative n=3 Tax=Toxoplasma gondii RepID=B6KPP5_TOXGO Length = 209 Score = 74.3 bits (182), Expect = 1e-12, Method: Composition-based stats. Identities = 30/64 (46%), Positives = 40/64 (62%), Gaps = 2/64 (3%) Query: 6 TGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRG-PAA 64 G KWF++ KGFGFIT +DG D+FVH T I++ FR L E + VEF ++ G G A Sbjct: 89 RGHCKWFDSKKGFGFITAEDG-TDLFVHQTEIKAQGFRNLAEGESVEFRVQVGHDGKRKA 147 Query: 65 ANVV 68 +V Sbjct: 148 VSVT 151 >UniRef50_B2IBA0 Cold-shock DNA-binding domain protein n=2 Tax=Rhizobiales RepID=B2IBA0_BEII9 Length = 205 Score = 74.3 bits (182), Expect = 1e-12, Method: Composition-based stats. Identities = 23/63 (36%), Positives = 36/63 (57%) Query: 8 LVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPAAANV 67 VKWFN KGFGF++ DG++D+FVH ++ + L+ +++ QG +G A V Sbjct: 135 KVKWFNRVKGFGFLSRGDGTEDIFVHMEILRRHGISILHPGEELRARFGQGPKGLIAIEV 194 Query: 68 VTL 70 L Sbjct: 195 RPL 197 Score = 69.7 bits (170), Expect = 3e-11, Method: Composition-based stats. Identities = 21/67 (31%), Positives = 38/67 (56%) Query: 4 KMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPA 63 +++G +KWF+ KG+GF+ D+G DV +H TA++ + E +V +G +G Sbjct: 32 EISGRIKWFDLVKGYGFVVADNGLGDVLLHVTALRKDGHSKACEGARVVCEAMRGTKGWQ 91 Query: 64 AANVVTL 70 V++L Sbjct: 92 VFRVISL 98 >UniRef50_Q803L0 Protein lin-28 homolog A n=13 Tax=Euteleostomi RepID=LN28A_DANRE Length = 202 Score = 74.0 bits (181), Expect = 1e-12, Method: Composition-based stats. Identities = 24/70 (34%), Positives = 37/70 (52%), Gaps = 7/70 (10%) Query: 6 TGLVKWFNADKGFGFITPD-------DGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQG 58 +G+ KWFN GFGF++ D DVFVH + + FR+L E + VEF+ ++ Sbjct: 35 SGVCKWFNVRMGFGFLSMTHREGICLDSPVDVFVHQSKLHMEGFRSLKEGEAVEFTFKRS 94 Query: 59 QRGPAAANVV 68 +G + V Sbjct: 95 SKGLESLQVT 104 >UniRef50_C0CRT9 Putative uncharacterized protein n=1 Tax=Blautia hydrogenotrophica DSM 10507 RepID=C0CRT9_9FIRM Length = 77 Score = 74.0 bits (181), Expect = 1e-12, Method: Composition-based stats. Identities = 23/63 (36%), Positives = 37/63 (58%), Gaps = 1/63 (1%) Query: 6 TGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPAAA 65 G VKWF+ KG+GFI D+G + FVH + I FR L ++V + ++ ++G A Sbjct: 14 HGTVKWFDPVKGYGFIAGDNGKET-FVHQSDILMRGFRHLETGERVSYRVKATEKGDKAI 72 Query: 66 NVV 68 +V+ Sbjct: 73 DVI 75 >UniRef50_D1S746 Cold-shock DNA-binding domain protein n=1 Tax=Micromonospora aurantiaca ATCC 27029 RepID=D1S746_9ACTO Length = 165 Score = 74.0 bits (181), Expect = 1e-12, Method: Composition-based stats. Identities = 26/66 (39%), Positives = 37/66 (56%), Gaps = 1/66 (1%) Query: 4 KMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPA 63 +TG V F+ +G+GFI PDDGS DVFVH + +++ L VE+ + +RGP Sbjct: 7 MLTGKVVRFDEVRGYGFIAPDDGSDDVFVHANMLDGDKW-ALTPGVPVEYDAVETERGPK 65 Query: 64 AANVVT 69 A V Sbjct: 66 AVLVRV 71 >UniRef50_Q2NK56 Cold shock protein n=6 Tax=Bacteria RepID=Q2NK56_AYWBP Length = 74 Score = 74.0 bits (181), Expect = 1e-12, Method: Composition-based stats. Identities = 34/70 (48%), Positives = 49/70 (70%), Gaps = 3/70 (4%) Query: 3 NKMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSN--EFRTLNENQKVEFSIEQGQR 60 K G +WF+ DKG+GFI DG KD+FVH+++IQ+ +TLNEN KVEF++++G R Sbjct: 4 KKEQGTCRWFSKDKGYGFIISADG-KDIFVHYSSIQTEVFGRKTLNENDKVEFTVKEGDR 62 Query: 61 GPAAANVVTL 70 G A +VV + Sbjct: 63 GAQAVDVVVV 72 >UniRef50_C4RFH3 DNA binding protein n=1 Tax=Micromonospora sp. ATCC 39149 RepID=C4RFH3_9ACTO Length = 150 Score = 74.0 bits (181), Expect = 1e-12, Method: Composition-based stats. Identities = 25/67 (37%), Positives = 36/67 (53%), Gaps = 1/67 (1%) Query: 4 KMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPA 63 +TG V F+ +G+GFI PD G DVFVH + +++ L VE+ + +RGP Sbjct: 1 MLTGRVVRFDEVRGYGFIAPDGGGDDVFVHANTVDGDKW-ALGPGVPVEYEAVENERGPK 59 Query: 64 AANVVTL 70 A V L Sbjct: 60 ALTVRVL 66 >UniRef50_Q1QLF4 Cold-shock DNA-binding protein family n=1 Tax=Nitrobacter hamburgensis X14 RepID=Q1QLF4_NITHX Length = 68 Score = 74.0 bits (181), Expect = 2e-12, Method: Composition-based stats. Identities = 26/68 (38%), Positives = 41/68 (60%), Gaps = 2/68 (2%) Query: 4 KMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGP- 62 TG VK+FNA+KG+GFI PDDG+ D+F+H + +++ R +VE+ + +G G Sbjct: 1 MQTGSVKFFNAEKGYGFIQPDDGTPDIFLHVHGL-ADKLRYPCPRDRVEYEVGKGPDGRL 59 Query: 63 AAANVVTL 70 A V + Sbjct: 60 RAERVALI 67 >UniRef50_Q2RZT3 Conserved domain protein n=2 Tax=Salinibacter ruber DSM 13855 RepID=Q2RZT3_SALRD Length = 75 Score = 73.6 bits (180), Expect = 2e-12, Method: Composition-based stats. Identities = 26/62 (41%), Positives = 37/62 (59%), Gaps = 1/62 (1%) Query: 6 TGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQS-NEFRTLNENQKVEFSIEQGQRGPAA 64 G +K+F+ +GFGFI P DGS+DVF+H I L E Q +E+ EQ ++G +A Sbjct: 3 KGKLKFFDTSRGFGFIEPLDGSEDVFLHANNISGMTSGEDLREGQTIEYETEQTEKGLSA 62 Query: 65 AN 66 N Sbjct: 63 LN 64 >UniRef50_D1U4V2 Cold-shock DNA-binding domain protein n=1 Tax=Desulfovibrio aespoeensis Aspo-2 RepID=D1U4V2_9DELT Length = 76 Score = 73.6 bits (180), Expect = 2e-12, Method: Composition-based stats. Identities = 28/67 (41%), Positives = 40/67 (59%), Gaps = 1/67 (1%) Query: 3 NKMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGP 62 + G V WFN KGFGFIT DDG DVFVH+T I + F++L ++V +++ + P Sbjct: 1 MRREGKVTWFNDKKGFGFITGDDG-LDVFVHYTEIVRDGFQSLEPGERVSYAVTDEEIAP 59 Query: 63 AAANVVT 69 A +V Sbjct: 60 KAVDVHL 66 >UniRef50_A6W4V4 Putative cold-shock DNA-binding domain protein n=1 Tax=Kineococcus radiotolerans SRS30216 RepID=A6W4V4_KINRD Length = 156 Score = 73.2 bits (179), Expect = 2e-12, Method: Composition-based stats. Identities = 26/70 (37%), Positives = 39/70 (55%), Gaps = 1/70 (1%) Query: 1 MSNKMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQR 60 M++ G V+ F+ +GFGFIT D ++VF H + E L E V+F+++QG R Sbjct: 1 MASLAKGKVRSFDDGRGFGFITSPDCPENVFFHVKDVVDLEAEDL-EGASVQFTLDQGDR 59 Query: 61 GPAAANVVTL 70 G A +V L Sbjct: 60 GYKATDVRPL 69 >UniRef50_C2E292 Cold-shock protein n=9 Tax=Lactobacillus RepID=C2E292_9LACO Length = 73 Score = 73.2 bits (179), Expect = 2e-12, Method: Composition-based stats. Identities = 24/64 (37%), Positives = 36/64 (56%) Query: 4 KMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPA 63 TG VK F++ GFGFI D FV +TAI+ +++L Q+V + + QG++G Sbjct: 1 MRTGTVKQFDSAAGFGFIDDDLTKASYFVFYTAIKEAGYKSLEIGQRVRYQLAQGKKGLQ 60 Query: 64 AANV 67 NV Sbjct: 61 CINV 64 >UniRef50_UPI0001B4CA82 DNA-binding protein n=1 Tax=Streptomyces viridochromogenes DSM 40736 RepID=UPI0001B4CA82 Length = 164 Score = 73.2 bits (179), Expect = 3e-12, Method: Composition-based stats. Identities = 25/64 (39%), Positives = 34/64 (53%), Gaps = 1/64 (1%) Query: 4 KMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPA 63 G+V F+ KG+GFI PD+G +DVFVH + TL +V F + G RG Sbjct: 1 MAQGVVVRFDDVKGYGFIAPDNGGEDVFVHVNDLAEPG-TTLTSGTRVVFDVLDGGRGLK 59 Query: 64 AANV 67 A +V Sbjct: 60 AYDV 63 >UniRef50_C4K358 RNA chaperone, transcription antiterminator n=3 Tax=Enterobacteriaceae RepID=C4K358_HAMD5 Length = 69 Score = 72.8 bits (178), Expect = 3e-12, Method: Composition-based stats. Identities = 29/70 (41%), Positives = 43/70 (61%), Gaps = 1/70 (1%) Query: 1 MSNKMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQR 60 M+ K G VKWF+ G+GFI+P+DG D++VH AI + + ++L Q VEFS Sbjct: 1 MTLK-KGKVKWFDKIAGYGFISPEDGGLDIYVHKAAIANIKDKSLIAGQDVEFSYRVSFH 59 Query: 61 GPAAANVVTL 70 GP+A +V+ Sbjct: 60 GPSAEDVIAF 69 >UniRef50_B4RAZ9 Cold-shock DNA-binding domain protein n=6 Tax=Caulobacteraceae RepID=B4RAZ9_PHEZH Length = 202 Score = 72.8 bits (178), Expect = 3e-12, Method: Composition-based stats. Identities = 27/71 (38%), Positives = 40/71 (56%), Gaps = 4/71 (5%) Query: 4 KMTGLVKWFNADKGFGFITPDD----GSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQ 59 ++TG VKWF+A KG+GFI PDD KDV +H T+++S+ E + + + Sbjct: 26 RITGRVKWFDAGKGYGFIVPDDPAQTDLKDVLLHVTSLRSSGREHCLEGSLITCDVVRRP 85 Query: 60 RGPAAANVVTL 70 +G A VV L Sbjct: 86 KGWQVAEVVDL 96 Score = 64.7 bits (157), Expect = 8e-10, Method: Composition-based stats. Identities = 19/60 (31%), Positives = 29/60 (48%) Query: 8 LVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPAAANV 67 VKWFN KG+GF+ D D+FVH ++ + L + V +G +G A + Sbjct: 137 KVKWFNRAKGYGFVIRDSQPGDIFVHIETLRRSGMEDLQPGENVMVRFAEGPKGLVVAEI 196 >UniRef50_B7RPT8 Cold shock protein n=1 Tax=Roseobacter sp. GAI101 RepID=B7RPT8_9RHOB Length = 182 Score = 72.8 bits (178), Expect = 3e-12, Method: Composition-based stats. Identities = 22/65 (33%), Positives = 38/65 (58%) Query: 6 TGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPAAA 65 TGLVKWF+ KGFGF+ D+G D+ +H +++ ++ + ++E + + QRG A Sbjct: 12 TGLVKWFDPAKGFGFVVSDEGGPDILLHVNVLRNYGQSSVADGARIELTAHETQRGVQAT 71 Query: 66 NVVTL 70 V + Sbjct: 72 QVHAI 76 Score = 60.1 bits (145), Expect = 2e-08, Method: Composition-based stats. Identities = 20/62 (32%), Positives = 30/62 (48%) Query: 8 LVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPAAANV 67 VKWF+ KGFGF S D+F+H ++ + L + + + G+RG AA V Sbjct: 107 RVKWFDKSKGFGFANVFGRSDDIFLHIEVLRQSGLSDLQPGEALALRVIMGERGHMAAEV 166 Query: 68 VT 69 Sbjct: 167 HA 168 >UniRef50_Q1GT29 Cold-shock DNA-binding protein family n=1 Tax=Sphingopyxis alaskensis RepID=Q1GT29_SPHAL Length = 90 Score = 72.8 bits (178), Expect = 3e-12, Method: Composition-based stats. Identities = 31/68 (45%), Positives = 44/68 (64%), Gaps = 1/68 (1%) Query: 2 SNKMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRG 61 + G VK+FN DKG+GFI +DGS D FVH TA+Q+ TLN+ Q+V + +E G+ G Sbjct: 21 TLMAIGTVKFFNNDKGYGFIENEDGSGDSFVHITAVQAAGMDTLNKEQRVSYELETGKNG 80 Query: 62 P-AAANVV 68 +A N+ Sbjct: 81 KVSAINLQ 88 >UniRef50_A0M1Q5 Cold shock-like protein n=13 Tax=Bacteria RepID=A0M1Q5_GRAFK Length = 64 Score = 72.4 bits (177), Expect = 4e-12, Method: Composition-based stats. Identities = 27/67 (40%), Positives = 41/67 (61%), Gaps = 4/67 (5%) Query: 4 KMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPA 63 G VK+FN KGFGFI DD ++D+FVH + + + E+ +V+F +EQG++G Sbjct: 1 MQEGKVKFFNNTKGFGFIKADDSNEDIFVHSSGLIDE----IREDDRVQFEVEQGKKGLN 56 Query: 64 AANVVTL 70 A NV + Sbjct: 57 AVNVEVI 63 >UniRef50_Q9H9Z2 Protein lin-28 homolog A n=33 Tax=Euteleostomi RepID=LN28A_HUMAN Length = 209 Score = 72.4 bits (177), Expect = 4e-12, Method: Composition-based stats. Identities = 24/69 (34%), Positives = 36/69 (52%), Gaps = 7/69 (10%) Query: 7 GLVKWFNADKGFGFITPD-------DGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQ 59 G+ KWFN GFGF++ D DVFVH + + FR+L E + VEF+ ++ Sbjct: 42 GICKWFNVRMGFGFLSMTARAGVALDPPVDVFVHQSKLHMEGFRSLKEGEAVEFTFKKSA 101 Query: 60 RGPAAANVV 68 +G + V Sbjct: 102 KGLESIRVT 110 >UniRef50_A0R441 'Cold-shock' DNA-binding domain protein n=18 Tax=Actinomycetales RepID=A0R441_MYCS2 Length = 149 Score = 72.4 bits (177), Expect = 4e-12, Method: Composition-based stats. Identities = 27/65 (41%), Positives = 43/65 (66%), Gaps = 2/65 (3%) Query: 6 TGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPAAA 65 TG VKW++A+KGFGF++ +DG +DV+V +A+ L Q+VEF + G+RGP A Sbjct: 16 TGKVKWYDAEKGFGFLSQEDG-EDVYVRSSALP-AGVEALKSGQRVEFGVAAGRRGPQAL 73 Query: 66 NVVTL 70 ++ + Sbjct: 74 SLKLI 78 >UniRef50_Q17JD9 Putative uncharacterized protein n=1 Tax=Aedes aegypti RepID=Q17JD9_AEDAE Length = 192 Score = 72.4 bits (177), Expect = 4e-12, Method: Composition-based stats. Identities = 27/71 (38%), Positives = 38/71 (53%), Gaps = 11/71 (15%) Query: 2 SNKMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEF----RTLNENQKVEFSIEQ 57 S ++TG VKWFNA GFGFIT D +D+FVH + I +++ + + VEF Sbjct: 31 SKRITGTVKWFNAKDGFGFITRHDTGEDIFVHKSCIFKPNRNHFTKSIGDGEIVEF---- 86 Query: 58 GQRGPAAANVV 68 G A+ V Sbjct: 87 ---GLIASKVT 94 >UniRef50_B9T6B7 Cold shock protein, putative n=1 Tax=Ricinus communis RepID=B9T6B7_RICCO Length = 257 Score = 72.4 bits (177), Expect = 4e-12, Method: Composition-based stats. Identities = 22/69 (31%), Positives = 37/69 (53%), Gaps = 1/69 (1%) Query: 2 SNKMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRG 61 + + G++ W++ +KG+GFI P+ G DVFVH ++++SN L +E+ G Sbjct: 107 NKRARGILIWYSNEKGYGFIKPNGGGVDVFVHSSSLKSNGHIHLGAGMPLEYETIISNAG 166 Query: 62 -PAAANVVT 69 A NV Sbjct: 167 KLQAINVTA 175 >UniRef50_Q5Z0N3 Putative cold shock protein n=2 Tax=Bacteria RepID=Q5Z0N3_NOCFA Length = 89 Score = 72.4 bits (177), Expect = 5e-12, Method: Composition-based stats. Identities = 30/70 (42%), Positives = 39/70 (55%), Gaps = 3/70 (4%) Query: 2 SNKMTGLVKWFNADKGFGFITPDDGSK-DVFVHFTAIQSNEFRTLNENQKVEFSIEQGQR 60 S G V WF+A KGFGFI P +G + VFV F++I+ + +RTL E Q V F G+ Sbjct: 12 STWYHGTVAWFDAPKGFGFIEPAEGPRGPVFVDFSSIEMSGYRTLVEGQPVRFVRSAGR- 70 Query: 61 GPAAANVVTL 70 A V L Sbjct: 71 -AEAVAVRPL 79 >UniRef50_A0PKZ5 Cold shock-like protein B CspB n=78 Tax=Actinomycetales RepID=A0PKZ5_MYCUA Length = 184 Score = 72.4 bits (177), Expect = 5e-12, Method: Composition-based stats. Identities = 28/65 (43%), Positives = 43/65 (66%), Gaps = 2/65 (3%) Query: 6 TGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPAAA 65 TG VKW+++DKGFGF++ ++G +DV+V +A+ L Q+VEF I G+RGP A Sbjct: 53 TGKVKWYDSDKGFGFLSQEEG-EDVYVRSSALP-AGVEGLKAGQRVEFGIASGRRGPQAL 110 Query: 66 NVVTL 70 ++ L Sbjct: 111 SLKLL 115 >UniRef50_C9NB66 Cold-shock DNA-binding domain protein n=1 Tax=Streptomyces flavogriseus ATCC 33331 RepID=C9NB66_9ACTO Length = 70 Score = 72.0 bits (176), Expect = 6e-12, Method: Composition-based stats. Identities = 26/66 (39%), Positives = 35/66 (53%) Query: 4 KMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPA 63 G V+ F+A+KG+G+I P G ++ VHF+AI L Q V F I Q +RGP Sbjct: 1 MAEGTVQVFSAEKGYGYIRPSTGGPEIIVHFSAIVEACPVGLVAGQTVSFDIVQRRRGPE 60 Query: 64 AANVVT 69 A V Sbjct: 61 AERVQI 66 >UniRef50_A1B0C7 Cold-shock DNA-binding protein family n=28 Tax=Rhodobacterales RepID=A1B0C7_PARDP Length = 197 Score = 72.0 bits (176), Expect = 6e-12, Method: Composition-based stats. Identities = 23/67 (34%), Positives = 38/67 (56%) Query: 4 KMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPA 63 K+ G+VKWF+ KGFGF+T DG D+ +H +++ ++ E V I++ RG Sbjct: 10 KIAGVVKWFDGSKGFGFLTDPDGGADILLHANVLRNFGQSSVAEGSHVIAIIQKTPRGMQ 69 Query: 64 AANVVTL 70 A V+ + Sbjct: 70 AVEVLEI 76 Score = 60.1 bits (145), Expect = 2e-08, Method: Composition-based stats. Identities = 20/60 (33%), Positives = 30/60 (50%) Query: 8 LVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPAAANV 67 VKWF+ KGFGF DVF+H ++ + F L + + + G+RG AA + Sbjct: 107 RVKWFDKAKGFGFANIFADKADVFLHVEVLRHSGFADLAVGEAIALRVVDGRRGMMAAQI 166 >UniRef50_A2SHE7 Cold-shock DNA-binding domain n=2 Tax=Betaproteobacteria RepID=A2SHE7_METPP Length = 203 Score = 72.0 bits (176), Expect = 6e-12, Method: Composition-based stats. Identities = 25/67 (37%), Positives = 35/67 (52%), Gaps = 2/67 (2%) Query: 3 NKMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRG- 61 ++ G +K +N ++GFGFI P G +D+FVH A S R Q V F +E G G Sbjct: 1 MRLDGKLKSWNDERGFGFIDPVHGGQDIFVHIKAFPSGTGR-PTVGQAVTFEVELGPNGK 59 Query: 62 PAAANVV 68 A +V Sbjct: 60 KRARSVQ 66 >UniRef50_A6ESQ3 Cold shock protein n=2 Tax=Bacteroidetes RepID=A6ESQ3_9BACT Length = 63 Score = 71.6 bits (175), Expect = 7e-12, Method: Composition-based stats. Identities = 27/65 (41%), Positives = 38/65 (58%), Gaps = 4/65 (6%) Query: 6 TGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPAAA 65 G+VK+FN KGFGFIT + KD FVH + + + E +VEF +++G +G A Sbjct: 3 KGIVKFFNDSKGFGFITEEGQEKDHFVHISGLIDE----VREGDEVEFELKEGNKGLNAV 58 Query: 66 NVVTL 70 NV L Sbjct: 59 NVRVL 63 >UniRef50_A5VJ42 Cold-shock DNA-binding protein family n=10 Tax=Lactobacillus RepID=A5VJ42_LACRD Length = 67 Score = 71.6 bits (175), Expect = 7e-12, Method: Composition-based stats. Identities = 27/67 (40%), Positives = 41/67 (61%), Gaps = 1/67 (1%) Query: 4 KMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPA 63 + G VK F+ KG+GFIT + +FVH++ I+ R L+ +++V I QGQ+GP Sbjct: 1 MLKGKVKSFDEQKGWGFITVPHEGE-IFVHYSGIEGTRRRILHPDEEVSLVIVQGQKGPQ 59 Query: 64 AANVVTL 70 AA+V L Sbjct: 60 AAHVRVL 66 >UniRef50_B3QHW3 Cold-shock DNA-binding domain protein n=92 Tax=Alphaproteobacteria RepID=B3QHW3_RHOPT Length = 235 Score = 71.6 bits (175), Expect = 7e-12, Method: Composition-based stats. Identities = 22/67 (32%), Positives = 43/67 (64%) Query: 4 KMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPA 63 +++G++KWF+A KG+GF+ PD+G DV +H T ++ + ++T E ++ Q +G Sbjct: 68 EISGVIKWFDASKGYGFVVPDNGWPDVLLHVTVLRRDGYQTAYEGARIVVECVQRAKGYQ 127 Query: 64 AANVVTL 70 A +V++ Sbjct: 128 AFRIVSM 134 Score = 64.7 bits (157), Expect = 8e-10, Method: Composition-based stats. Identities = 22/61 (36%), Positives = 31/61 (50%) Query: 9 VKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPAAANVV 68 VKWFN +GFGF+T +G+ D+FVH ++ L Q V G +G AA + Sbjct: 165 VKWFNRLRGFGFLTCGEGTPDIFVHMETLRRYGMTELRPGQYVLVRFGPGSKGMMAAEIQ 224 Query: 69 T 69 Sbjct: 225 P 225 >UniRef50_B0W4X1 Putative uncharacterized protein n=1 Tax=Culex quinquefasciatus RepID=B0W4X1_CULQU Length = 247 Score = 71.6 bits (175), Expect = 8e-12, Method: Composition-based stats. Identities = 27/71 (38%), Positives = 38/71 (53%), Gaps = 11/71 (15%) Query: 2 SNKMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAI----QSNEFRTLNENQKVEFSIEQ 57 + ++TG VKWFN GFGFIT D +D+FVH ++I + R++ E + VEF Sbjct: 49 NKRITGTVKWFNVKDGFGFITRHDTGEDLFVHQSSILRPNSRHSVRSVGEGEVVEF---- 104 Query: 58 GQRGPAAANVV 68 G A V Sbjct: 105 ---GVIATKVT 112 >UniRef50_Q6ALH9 Hypothetical cold-shock protein n=1 Tax=Desulfotalea psychrophila RepID=Q6ALH9_DESPS Length = 204 Score = 71.6 bits (175), Expect = 8e-12, Method: Composition-based stats. Identities = 24/65 (36%), Positives = 35/65 (53%), Gaps = 2/65 (3%) Query: 7 GLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGP-AAA 65 G +K +N +KG+GFITPD+G DVF+H A + R Q + + G +G A Sbjct: 4 GTIKHWNDEKGYGFITPDNGGNDVFLHIKAFKKRPHR-PEIGQVISYGTTSGDKGRLRAC 62 Query: 66 NVVTL 70 NV + Sbjct: 63 NVQYM 67 >UniRef50_C7LWH7 Cold-shock DNA-binding domain protein n=2 Tax=Proteobacteria RepID=C7LWH7_DESBD Length = 168 Score = 71.6 bits (175), Expect = 8e-12, Method: Composition-based stats. Identities = 24/66 (36%), Positives = 34/66 (51%), Gaps = 3/66 (4%) Query: 3 NKMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQ-GQRG 61 + G + + D+GFGFITP G VFVH +A+Q R + V + + G +G Sbjct: 1 MRFHGEISEWRDDRGFGFITPTGGGTRVFVHISALQKG--RRPRAGEMVTYEVGNSGDKG 58 Query: 62 PAAANV 67 P A NV Sbjct: 59 PRALNV 64 >UniRef50_Q016S2 Putative nucleic acid binding protein (ISS) n=1 Tax=Ostreococcus tauri RepID=Q016S2_OSTTA Length = 125 Score = 71.3 bits (174), Expect = 8e-12, Method: Composition-based stats. Identities = 31/78 (39%), Positives = 39/78 (50%), Gaps = 9/78 (11%) Query: 2 SNKMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRT------LNENQKVEFSI 55 S + G VKWFN KGFG+ITPDDG DVFVH +A++ FR + VEF + Sbjct: 8 SARRRGKVKWFNCTKGFGYITPDDGEPDVFVHQSALKMEGFRRTDGRRFATQGDSVEFDV 67 Query: 56 EQ---GQRGPAAANVVTL 70 E A V + Sbjct: 68 EHESPTDERLKAVCVTGI 85 >UniRef50_A1TSW1 Cold-shock DNA-binding domain protein n=4 Tax=Acidovorax RepID=A1TSW1_ACIAC Length = 224 Score = 71.3 bits (174), Expect = 9e-12, Method: Composition-based stats. Identities = 25/65 (38%), Positives = 33/65 (50%), Gaps = 2/65 (3%) Query: 7 GLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGP-AAA 65 G++ +N +GFGFI P G VFVH A Q R Q+V F++E G G A Sbjct: 5 GVIASWNDARGFGFIEPLQGGDPVFVHIKAFQGGAPR-PQAGQRVRFAVEAGPGGRKRAC 63 Query: 66 NVVTL 70 V +L Sbjct: 64 RVESL 68 >UniRef50_Q5P4M3 Probable cold shock family protein n=1 Tax=Aromatoleum aromaticum EbN1 RepID=Q5P4M3_AZOSE Length = 189 Score = 71.3 bits (174), Expect = 9e-12, Method: Composition-based stats. Identities = 23/68 (33%), Positives = 33/68 (48%), Gaps = 2/68 (2%) Query: 3 NKMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQG-QRG 61 ++ G + +N D+GFGFI P DG +VFVH +A + R + + F IE R Sbjct: 1 MRIEGTLGKWNDDRGFGFIVPKDGGPEVFVHVSAFPRDGRR-PQIGEPLSFEIELDKDRK 59 Query: 62 PAAANVVT 69 A V Sbjct: 60 KRAVGVSR 67 >UniRef50_A8NIV0 'Cold-shock' DNA-binding domain containing protein n=1 Tax=Brugia malayi RepID=A8NIV0_BRUMA Length = 244 Score = 71.3 bits (174), Expect = 1e-11, Method: Composition-based stats. Identities = 31/70 (44%), Positives = 41/70 (58%), Gaps = 6/70 (8%) Query: 5 MTGLVKWFNADKGFGFITPDDG-SKDVFVHFTAIQSNE-----FRTLNENQKVEFSIEQG 58 + G VKW++ +GFI DD DVFVH TAI + RTL + ++V F I QG Sbjct: 6 VKGKVKWYSVRYHYGFIARDDNKGNDVFVHQTAIAKSRIIKYYLRTLGDGEEVLFDIVQG 65 Query: 59 QRGPAAANVV 68 ++GP AANV Sbjct: 66 KQGPEAANVT 75 >UniRef50_A9ART0 Cold-shock DNA-binding domain protein n=1 Tax=Burkholderia multivorans ATCC 17616 RepID=A9ART0_BURM1 Length = 193 Score = 70.9 bits (173), Expect = 1e-11, Method: Composition-based stats. Identities = 25/66 (37%), Positives = 32/66 (48%), Gaps = 3/66 (4%) Query: 5 MTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPAA 64 M G VKWF+ DKG GFI + + D F H + + E VEF +RGP A Sbjct: 1 MRGTVKWFSKDKGHGFIYGES-AVDYFFHVSDVV--GADAPREGDIVEFDATSNKRGPRA 57 Query: 65 ANVVTL 70 A V + Sbjct: 58 ATVRIV 63 >UniRef50_A3J0H8 Cold shock protein n=2 Tax=Bacteroidetes RepID=A3J0H8_9FLAO Length = 148 Score = 70.5 bits (172), Expect = 2e-11, Method: Composition-based stats. Identities = 20/64 (31%), Positives = 33/64 (51%), Gaps = 4/64 (6%) Query: 7 GLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPAAAN 66 G + +FN KGFGFI + + FVH + + + + E V + +E+G +G A N Sbjct: 89 GTIDFFNDSKGFGFIKAVETGEKYFVHISGLLDD----VKEGNLVTYDLEKGAKGMNAVN 144 Query: 67 VVTL 70 V + Sbjct: 145 VKKI 148 >UniRef50_A8M1B3 Cold-shock DNA-binding domain protein n=2 Tax=Salinispora RepID=A8M1B3_SALAI Length = 138 Score = 70.5 bits (172), Expect = 2e-11, Method: Composition-based stats. Identities = 20/64 (31%), Positives = 32/64 (50%), Gaps = 1/64 (1%) Query: 6 TGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPAAA 65 G + F+ +G+GFI P G DVFVH ++ + +V + + Q +RG A Sbjct: 3 KGTIVRFDDVRGYGFIAPFGGGDDVFVHANDF-GDQRHAVAAGMRVSYEVVQSERGLKVA 61 Query: 66 NVVT 69 +VV Sbjct: 62 SVVL 65 >UniRef50_D1XSW6 Cold-shock DNA-binding domain protein n=3 Tax=Streptomyces RepID=D1XSW6_9ACTO Length = 143 Score = 70.5 bits (172), Expect = 2e-11, Method: Composition-based stats. Identities = 24/63 (38%), Positives = 33/63 (52%), Gaps = 1/63 (1%) Query: 7 GLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPAAAN 66 G V F+ +G+GFI P+ G +DVF+H + E + VEF IE G RG A+ Sbjct: 4 GRVIRFDGMRGYGFIAPEHGGEDVFMHVNDLLIPE-SAVRAGLMVEFEIEDGDRGLKASE 62 Query: 67 VVT 69 V Sbjct: 63 VRL 65 >UniRef50_A1VD07 Cold-shock DNA-binding protein family n=4 Tax=Desulfovibrio vulgaris RepID=A1VD07_DESVV Length = 201 Score = 70.1 bits (171), Expect = 2e-11, Method: Composition-based stats. Identities = 23/66 (34%), Positives = 37/66 (56%), Gaps = 2/66 (3%) Query: 6 TGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQ-GQRGPAA 64 G + +N ++GFGFI+PDDGS VFVH +A +S ++V + + +GP A Sbjct: 27 QGKIAQWNDERGFGFISPDDGSPRVFVHISAFRSRHP-LPEVGERVLYYLGPLSPKGPRA 85 Query: 65 ANVVTL 70 + V + Sbjct: 86 SVVRYI 91 >UniRef50_Q5YWN3 Putative cold shock protein n=1 Tax=Nocardia farcinica RepID=Q5YWN3_NOCFA Length = 130 Score = 70.1 bits (171), Expect = 2e-11, Method: Composition-based stats. Identities = 26/64 (40%), Positives = 38/64 (59%), Gaps = 1/64 (1%) Query: 7 GLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPAAAN 66 G + F++ +GFGFI P+DG DVFVH I +E L + + EF + +G RGP A N Sbjct: 6 GKLVSFDSSRGFGFIRPEDGGPDVFVHVNDIGLDE-DELRQGRVFEFDVTEGDRGPKAIN 64 Query: 67 VVTL 70 + + Sbjct: 65 LSAV 68 >UniRef50_A4VQF2 Cold-shock DNA-binding domain protein n=12 Tax=Bacteria RepID=A4VQF2_PSEU5 Length = 235 Score = 70.1 bits (171), Expect = 2e-11, Method: Composition-based stats. Identities = 22/68 (32%), Positives = 36/68 (52%), Gaps = 3/68 (4%) Query: 3 NKMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGP 62 + G +K +N DKGFGFI P+ G +++FVH +A+ + R +V F + +G Sbjct: 1 MERRGTLKSWNDDKGFGFIRPEQGGEELFVHISAV--HGERRPLVGGRVLFVAGRDAQGR 58 Query: 63 -AAANVVT 69 A +V Sbjct: 59 LRAEHVRL 66 >UniRef50_B7G5B5 Predicted protein n=1 Tax=Phaeodactylum tricornutum CCAP 1055/1 RepID=B7G5B5_PHATR Length = 286 Score = 70.1 bits (171), Expect = 2e-11, Method: Composition-based stats. Identities = 29/74 (39%), Positives = 45/74 (60%), Gaps = 7/74 (9%) Query: 3 NKMTGLVKWFNADKGFGFITPDDGS----KDVFVHFTAIQSNE-FRTLNENQKVEFSIEQ 57 +K+ G VKWF++ KG+GF+ P + +++FVH T+IQS +RTL EN ++EF +E+ Sbjct: 2 SKVQGTVKWFDSRKGYGFVAPTSDNSPTAEEIFVHQTSIQSEGAYRTLVENSEIEFDVEK 61 Query: 58 GQR--GPAAANVVT 69 A NV Sbjct: 62 EAESGKFKAINVTA 75 >UniRef50_C7PR46 Cold-shock DNA-binding domain protein n=1 Tax=Chitinophaga pinensis DSM 2588 RepID=C7PR46_CHIPD Length = 147 Score = 69.7 bits (170), Expect = 2e-11, Method: Composition-based stats. Identities = 25/65 (38%), Positives = 33/65 (50%), Gaps = 4/65 (6%) Query: 6 TGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPAAA 65 TG+V +FN KGFGFI D + VF H + + E +V F E+G RG A Sbjct: 83 TGVVSFFNLSKGFGFINDDSSKESVFFHMNQLA----HPVKEKDRVSFLREKGPRGFNAI 138 Query: 66 NVVTL 70 NV + Sbjct: 139 NVTKI 143 >UniRef50_Q7WXG5 Putative uncharacterized protein n=2 Tax=Cupriavidus RepID=Q7WXG5_RALEH Length = 191 Score = 69.7 bits (170), Expect = 2e-11, Method: Composition-based stats. Identities = 28/69 (40%), Positives = 37/69 (53%), Gaps = 2/69 (2%) Query: 3 NKMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGP 62 K G VK ++ADKGFGFI KDVF H TA+Q+ T +V F + +G+ G Sbjct: 1 MKKAGQVKTWHADKGFGFIDVYADMKDVFFHVTALQTRAV-TPTPGDRVSFELGKGKDGR 59 Query: 63 -AAANVVTL 70 A NV + Sbjct: 60 IQALNVAIV 68 >UniRef50_C0Z2E8 AT4G38680 protein n=103 Tax=cellular organisms RepID=C0Z2E8_ARATH Length = 204 Score = 69.7 bits (170), Expect = 3e-11, Method: Composition-based stats. Identities = 25/43 (58%), Positives = 32/43 (74%) Query: 3 NKMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTL 45 + G VKWF+ KGFGFITPDDG D+FVH ++I+S FR+L Sbjct: 9 ERRKGSVKWFDTQKGFGFITPDDGGDDLFVHQSSIRSEGFRSL 51 >UniRef50_Q042Q8 Cold-shock DNA-binding protein family n=18 Tax=Lactobacillus RepID=Q042Q8_LACGA Length = 69 Score = 69.7 bits (170), Expect = 3e-11, Method: Composition-based stats. Identities = 20/64 (31%), Positives = 34/64 (53%) Query: 4 KMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPA 63 G VK F+++ +GFI D FV + +I+ ++ LN Q+V + + QG++G Sbjct: 1 MRKGTVKQFDSNSAYGFIEDDLTHSSYFVFYKSIKEEGYKKLNVGQRVRYQLAQGKKGLQ 60 Query: 64 AANV 67 NV Sbjct: 61 CINV 64 >UniRef50_UPI0001AF6C46 cold-shock DNA-binding protein family protein n=1 Tax=Mycobacterium kansasii ATCC 12478 RepID=UPI0001AF6C46 Length = 99 Score = 69.3 bits (169), Expect = 3e-11, Method: Composition-based stats. Identities = 23/70 (32%), Positives = 36/70 (51%) Query: 1 MSNKMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQR 60 MS G++ WF+ ++GFGF+ P DG +DVF+ + I ++E Q V + + Sbjct: 30 MSTVSYGVINWFDDERGFGFVHPADGDRDVFIDSSEIVDWPAGGVHEGQHVSYQTGGTRH 89 Query: 61 GPAAANVVTL 70 P A V L Sbjct: 90 WPRAQAVHIL 99 >UniRef50_D0LBW3 Cold-shock protein DNA-binding protein n=2 Tax=Corynebacterineae RepID=D0LBW3_GORB4 Length = 164 Score = 69.3 bits (169), Expect = 4e-11, Method: Composition-based stats. Identities = 24/63 (38%), Positives = 37/63 (58%), Gaps = 1/63 (1%) Query: 5 MTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPAA 64 ++G V ++ ++GFGF+ P+ G DVF+H I +E +L KV F +E+ RG A Sbjct: 7 VSGKVVHYDTNRGFGFLAPESGGADVFLHINDIDIDE-SSLKPGAKVSFDVEETDRGAKA 65 Query: 65 ANV 67 NV Sbjct: 66 VNV 68 >UniRef50_Q11SL0 Cold-shock DNA-binding protein family n=4 Tax=Bacteroidetes RepID=Q11SL0_CYTH3 Length = 63 Score = 69.0 bits (168), Expect = 4e-11, Method: Composition-based stats. Identities = 25/64 (39%), Positives = 37/64 (57%), Gaps = 4/64 (6%) Query: 7 GLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPAAAN 66 G VK+FN KGFGFI + K+ FVH + + + EN +V F +E+G++G A N Sbjct: 4 GTVKFFNNSKGFGFIIEKESGKEYFVHVSGLVDE----IRENDEVTFELEKGKKGLNAVN 59 Query: 67 VVTL 70 V + Sbjct: 60 VKLV 63 >UniRef50_C7IHA3 Cold-shock DNA-binding domain protein n=1 Tax=Clostridium papyrosolvens DSM 2782 RepID=C7IHA3_9CLOT Length = 436 Score = 69.0 bits (168), Expect = 4e-11, Method: Composition-based stats. Identities = 20/70 (28%), Positives = 38/70 (54%), Gaps = 2/70 (2%) Query: 1 MSNKMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQR 60 +S+ + G VK + +++GFGFI D K+ + H + + + + E V FSI++ + Sbjct: 366 VSDIIKGKVKKYVSERGFGFIK--DREKEFYFHISDVYQTHQKNVCEGADVTFSIQESTK 423 Query: 61 GPAAANVVTL 70 GP A + + Sbjct: 424 GPVAKQIKVV 433 >UniRef50_Q2RNN9 Cold-shock DNA-binding protein family n=2 Tax=Rhodospirillum RepID=Q2RNN9_RHORT Length = 210 Score = 69.0 bits (168), Expect = 5e-11, Method: Composition-based stats. Identities = 24/67 (35%), Positives = 36/67 (53%) Query: 1 MSNKMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQR 60 M ++ T VKWFNA KGFGF+ DG D F+H + +Q + L E + + GQ+ Sbjct: 1 MLSRSTATVKWFNATKGFGFVRVSDGEPDAFLHISVLQRAGYSELPEGATIVCDLAPGQK 60 Query: 61 GPAAANV 67 G + + Sbjct: 61 GMQVSEI 67 Score = 65.9 bits (160), Expect = 4e-10, Method: Composition-based stats. Identities = 28/62 (45%), Positives = 40/62 (64%) Query: 3 NKMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGP 62 ++ G+VK+F+ADKGFGF+ PD G KDV+V +Q L + Q+V SI G++GP Sbjct: 143 TEIDGVVKFFSADKGFGFVVPDGGGKDVYVGSRTLQDCGVSVLEQGQRVRMSIRMGKKGP 202 Query: 63 AA 64 A Sbjct: 203 MA 204 >UniRef50_C6C161 Cold-shock DNA-binding domain protein n=1 Tax=Desulfovibrio salexigens DSM 2638 RepID=C6C161_DESAD Length = 69 Score = 68.6 bits (167), Expect = 5e-11, Method: Composition-based stats. Identities = 25/66 (37%), Positives = 39/66 (59%), Gaps = 1/66 (1%) Query: 5 MTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPAA 64 + G+V WFN KGFGFI D+ +D++VH++ + + F+TLN +KV F + P A Sbjct: 3 LKGVVSWFNDIKGFGFIV-DEAGRDIYVHYSEVLRDGFKTLNVGEKVVFEVIDEDTAPKA 61 Query: 65 ANVVTL 70 V + Sbjct: 62 TAVRII 67 >UniRef50_Q12K82 Putative uncharacterized protein n=1 Tax=Shewanella denitrificans OS217 RepID=Q12K82_SHEDO Length = 196 Score = 68.6 bits (167), Expect = 6e-11, Method: Composition-based stats. Identities = 20/68 (29%), Positives = 39/68 (57%), Gaps = 2/68 (2%) Query: 3 NKMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRG- 61 ++ G + ++ DKGFGFI P+ +VF+H +A+++ R E+ + +++ ++G Sbjct: 1 MRVKGKLVRWDDDKGFGFIRPNLTGPEVFLHISALRNASRR-PQEDDVITYALVADKQGR 59 Query: 62 PAAANVVT 69 P AAN Sbjct: 60 PTAANATL 67 >UniRef50_D2QU65 Cold-shock DNA-binding domain protein n=23 Tax=Bacteroidetes RepID=D2QU65_9SPHI Length = 68 Score = 68.6 bits (167), Expect = 6e-11, Method: Composition-based stats. Identities = 26/67 (38%), Positives = 40/67 (59%), Gaps = 3/67 (4%) Query: 4 KMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPA 63 TG+VK+FN KG+GFI DD ++D+FVH T + T+ E +V+F + G++G Sbjct: 1 MQTGVVKFFNESKGYGFIVEDDTNRDIFVHITGLNGI---TIREKDRVQFEVVDGKKGLN 57 Query: 64 AANVVTL 70 A V + Sbjct: 58 AVKVKKI 64 >UniRef50_D2RAW4 Cold-shock DNA-binding domain protein n=2 Tax=Bifidobacteriaceae RepID=D2RAW4_GARVA Length = 129 Score = 68.6 bits (167), Expect = 6e-11, Method: Composition-based stats. Identities = 27/65 (41%), Positives = 43/65 (66%), Gaps = 4/65 (6%) Query: 7 GLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPAAA- 65 G V+W++ KG+GFI DDG KDVF+ A+ ++L++ +VEFS+ +G++GP A Sbjct: 4 GRVRWYDTQKGYGFIVGDDG-KDVFLPAAALPVT-VKSLHKGTRVEFSVIEGRKGPQAMG 61 Query: 66 -NVVT 69 NV+ Sbjct: 62 LNVIA 66 >UniRef50_Q7NNC3 Gsr0488 protein n=1 Tax=Gloeobacter violaceus RepID=Q7NNC3_GLOVI Length = 65 Score = 68.6 bits (167), Expect = 6e-11, Method: Composition-based stats. Identities = 25/61 (40%), Positives = 35/61 (57%) Query: 9 VKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPAAANVV 68 V+WF+ G+G I DD ++VF+ FTAI +RT+ + V F + QG GP A NV Sbjct: 2 VRWFDLQAGYGAIARDDTGEEVFLLFTAIPGEGYRTIAPSTAVHFELAQGPSGPVARNVQ 61 Query: 69 T 69 Sbjct: 62 K 62 >UniRef50_B0T0Q8 Cold-shock DNA-binding domain protein n=2 Tax=Caulobacteraceae RepID=B0T0Q8_CAUSK Length = 201 Score = 68.6 bits (167), Expect = 7e-11, Method: Composition-based stats. Identities = 24/71 (33%), Positives = 39/71 (54%), Gaps = 4/71 (5%) Query: 4 KMTGLVKWFNADKGFGFITPDDGS----KDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQ 59 +++G VKWF+ KG+GFI PDD KDV +H T++++ T E + + + Sbjct: 17 RISGRVKWFDTGKGYGFIVPDDPGQTGLKDVLLHVTSLRNCGRETALEGAVIVCDVVKRP 76 Query: 60 RGPAAANVVTL 70 +G + VV L Sbjct: 77 KGWQVSEVVDL 87 Score = 64.3 bits (156), Expect = 1e-09, Method: Composition-based stats. Identities = 19/61 (31%), Positives = 27/61 (44%) Query: 8 LVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPAAANV 67 VKWFN KG+GF+ D D+FVH ++ L V +G +G A + Sbjct: 137 KVKWFNRTKGYGFVVRDGQPGDIFVHIETLRRGGLEDLQPGDDVMVRFAEGPKGLVVAEI 196 Query: 68 V 68 Sbjct: 197 T 197 >UniRef50_C0WQD2 Possible cold-shock protein n=3 Tax=Lactobacillus RepID=C0WQD2_LACBU Length = 93 Score = 68.2 bits (166), Expect = 7e-11, Method: Composition-based stats. Identities = 22/68 (32%), Positives = 35/68 (51%), Gaps = 1/68 (1%) Query: 3 NKMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGP 62 + G VK +NA GFGFIT D G ++F A ++ + +V + + +GQ+GP Sbjct: 22 KMLYGKVKTYNAKNGFGFITQDQG-DNLFFFKNAFHGEDYSRIVPGIRVSYVVVEGQKGP 80 Query: 63 AAANVVTL 70 AA + Sbjct: 81 QAAKAQIV 88 >UniRef50_A4SJX6 Cold-shock protein, DNA-binding n=2 Tax=Aeromonas RepID=A4SJX6_AERS4 Length = 219 Score = 68.2 bits (166), Expect = 7e-11, Method: Composition-based stats. Identities = 21/71 (29%), Positives = 35/71 (49%), Gaps = 7/71 (9%) Query: 3 NKMTGLVKWFNADKGFGFITP-----DDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQ 57 + G + +N +GFGFITP + ++FVH +A+QS+ N ++V + + Sbjct: 1 MRYQGRIASWNEARGFGFITPEQEGGEQQGSELFVHISALQSDG-SLPNVGERVSYQLGT 59 Query: 58 G-QRGPAAANV 67 G P A V Sbjct: 60 GKDDKPRAVQV 70 Database: uniref50.fasta Posted date: Mar 8, 2010 10:38 AM Number of letters in database: 1,040,396,356 Number of sequences in database: 3,077,464 Lambda K H 0.315 0.173 0.573 Lambda K H 0.267 0.0529 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 589,112,258 Number of Sequences: 3077464 Number of extensions: 24112179 Number of successful extensions: 56660 Number of sequences better than 1.0e-01: 250 Number of HSP's better than 0.1 without gapping: 1147 Number of HSP's successfully gapped in prelim test: 280 Number of HSP's that attempted gapping in prelim test: 54409 Number of HSP's gapped (non-prelim): 1737 length of query: 70 length of database: 1,040,396,356 effective HSP length: 42 effective length of query: 28 effective length of database: 911,142,868 effective search space: 25512000304 effective search space used: 25512000304 T: 11 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.2 bits) S2: 88 (38.1 bits)