Email l.a.kelley@imperial.ac.uk Description P76222 Date Thu Jan 5 12:20:47 GMT 2012 Unique Job ID f1b5275eaf6c8812

Detailed template information

# Template Alignment Coverage 3D Model Confidence % i.d. Template Information

1 d2prra1 100.0 19 Fold:AhpD-like Superfamily:AhpD-like Family:Atu0492-like 2 d2pfxa1 100.0 15 Fold:AhpD-like Superfamily:AhpD-like Family:Atu0492-like 3 d2oyoa1 100.0 23 Fold:AhpD-like Superfamily:AhpD-like Family:Atu0492-like 4 c3c1lB_ 100.0 14 PDB header:oxidoreductase Chain: B: PDB Molecule:putative antioxidant defense protein mlr4105; PDBTitle: crystal structure of an antioxidant defense protein (mlr4105) from2 mesorhizobium loti maff303099 at 2.00 a resolution 5 c3lvyB_ 100.0 15 PDB header:lyase Chain: B: PDB Molecule:carboxymuconolactone decarboxylase family; PDBTitle: crystal structure of carboxymuconolactone decarboxylase2 family protein smu.961 from streptococcus mutans 6 d2o4da1 100.0 23 Fold:AhpD-like Superfamily:AhpD-like Family:Atu0492-like 7 d2gmya1 100.0 23 Fold:AhpD-like Superfamily:AhpD-like Family:Atu0492-like 8 d2ouwa1 99.9 22 Fold:AhpD-like Superfamily:AhpD-like Family:TTHA0727-like 9 c2qeuA_ 99.6 13 PDB header:lyase Chain: A: PDB Molecule:putative carboxymuconolactone decarboxylase; PDBTitle: crystal structure of putative carboxymuconolactone decarboxylase2 (yp_555818.1) from burkholderia xenovorans lb400 at 1.65 a resolution 10 d2cwqa1 99.4 18 Fold:AhpD-like Superfamily:AhpD-like Family:TTHA0727-like 11 d2q0ta1 99.3 18 Fold:AhpD-like Superfamily:AhpD-like Family:AhpD 12 c1p8cD_ 99.3 10 PDB header:structural genomics, unknown function Chain: D: PDB Molecule:conserved hypothetical protein; PDBTitle: crystal structure of tm1620 (apc4843) from thermotoga2 maritima 13 c3beyC_ 99.3 16 PDB header:structural genomics, unknown function Chain: C: PDB Molecule:conserved protein o27018; PDBTitle: crystal structure of the protein o27018 from methanobacterium2 thermoautotrophicum. northeast structural genomics consortium target3 tt217 14 d1vkea_ 99.2 10 Fold:AhpD-like Superfamily:AhpD-like Family:CMD-like 15 c3d7iB_ 99.1 11 PDB header:lyase Chain: B: PDB Molecule:carboxymuconolactone decarboxylase family protein; PDBTitle: crystal structure of carboxymuconolactone decarboxylase family protein2 possibly involved in oxygen detoxification (1591455) from3 methanococcus jannaschii at 1.75 a resolution 16 d1vkeb_ 98.9 10 Fold:AhpD-like Superfamily:AhpD-like Family:CMD-like 17 d1knca_ 98.8 9 Fold:AhpD-like Superfamily:AhpD-like Family:AhpD 18 d2af7a1 97.6 17 Fold:AhpD-like Superfamily:AhpD-like Family:CMD-like 19 d1a9xa1 80.3 12 Fold:Carbamoyl phosphate synthetase, large subunit connection domain Superfamily:Carbamoyl phosphate synthetase, large subunit connection domain Family:Carbamoyl phosphate synthetase, large subunit connection domain 20 c3bjxB_ 75.1 18 PDB header:hydrolase Chain: B: PDB Molecule:halocarboxylic acid dehalogenase dehi; PDBTitle: structure of a group i haloacid dehalogenase from2 pseudomonas putida strain pp3 21 d2p7vb1 not modelled 33.9 5 Fold:DNA/RNA-binding 3-helical bundle Superfamily:Sigma3 and sigma4 domains of RNA polymerase sigma factors Family:Sigma4 domain 22 c3gk0H_ not modelled 26.9 19 PDB header:transferase Chain: H: PDB Molecule:pyridoxine 5'-phosphate synthase; PDBTitle: crystal structure of pyridoxal phosphate biosynthetic2 protein from burkholderia pseudomallei 23 d1m5wa_ not modelled 24.4 15 Fold:TIM beta/alpha-barrel Superfamily:Pyridoxine 5'-phosphate synthase Family:Pyridoxine 5'-phosphate synthase 24 c2k8sA_ not modelled 21.4 15 PDB header:oxidoreductase Chain: A: PDB Molecule:thioredoxin; PDBTitle: solution nmr structure of dimeric thioredoxin-like protein2 ne0084 from nitrosomonas europea: northeast structural3 genomics target net6 25 d1khda1 not modelled 18.8 12 Fold:Methionine synthase domain-like Superfamily:Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain Family:Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain 26 c2k9lA_ not modelled 18.6 13 PDB header:transcription Chain: A: PDB Molecule:rna polymerase sigma factor rpon; PDBTitle: structure of the core binding domain of sigma54 27 d1wgla_ not modelled 17.2 14 Fold:RuvA C-terminal domain-like Superfamily:UBA-like Family:CUE domain 28 c3l9vE_ not modelled 15.2 10 PDB header:oxidoreductase Chain: E: PDB Molecule:putative thiol-disulfide isomerase or thioredoxin; PDBTitle: crystal structure of salmonella enterica serovar typhimurium srga 29 c1t3bA_ not modelled 13.4 22 PDB header:isomerase Chain: A: PDB Molecule:thiol:disulfide interchange protein dsbc; PDBTitle: x-ray structure of dsbc from haemophilus influenzae 30 c3dvwA_ not modelled 12.7 17 PDB header:oxidoreductase Chain: A: PDB Molecule:thiol:disulfide interchange protein dsba; PDBTitle: crystal structure of reduced dsba1 from neisseria2 meningitidis 31 c2k9mA_ not modelled 11.9 13 PDB header:transcription Chain: A: PDB Molecule:rna polymerase sigma factor rpon; PDBTitle: structure of the core binding domain of sigma54 32 d1v8ga1 not modelled 11.8 11 Fold:Methionine synthase domain-like Superfamily:Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain Family:Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain 33 d2fug21 not modelled 11.4 17 Fold:Thioredoxin fold Superfamily:Thioredoxin-like Family:NQO2-like 34 d1t3ba1 not modelled 11.4 22 Fold:Thioredoxin fold Superfamily:Thioredoxin-like Family:DsbC/DsbG C-terminal domain-like 35 c3f4tA_ not modelled 11.3 17 PDB header:oxidoreductase Chain: A: PDB Molecule:putative uncharacterized protein; PDBTitle: crystal structure of wolbachia pipientis alpha-dsba1 c97a/c146a 36 c1jmtB_ not modelled 11.2 29 PDB header:rna binding protein Chain: B: PDB Molecule:splicing factor u2af 65 kda subunit; PDBTitle: x-ray structure of a core u2af65/u2af35 heterodimer 37 d1beda_ not modelled 10.9 17 Fold:Thioredoxin fold Superfamily:Thioredoxin-like Family:DsbA-like 38 c2jvlA_ not modelled 10.5 20 PDB header:transcription Chain: A: PDB Molecule:trmbf1; PDBTitle: nmr structure of the c-terminal domain of mbf1 of trichoderma reesei 39 c2dhyA_ not modelled 10.4 7 PDB header:immune system Chain: A: PDB Molecule:cue domain-containing protein 1; PDBTitle: solution structure of the cue domain in the human cue2 domain containing protein 1 (cuedc1) 40 c3gmfA_ not modelled 10.3 13 PDB header:oxidoreductase Chain: A: PDB Molecule:protein-disulfide isomerase; PDBTitle: crystal structure of protein-disulfide isomerase from novosphingobium2 aromaticivorans 41 d1ddfa_ not modelled 10.2 7 Fold:DEATH domain Superfamily:DEATH domain Family:DEATH domain, DD 42 c1v57A_ not modelled 9.7 17 PDB header:isomerase Chain: A: PDB Molecule:thiol:disulfide interchange protein dsbg; PDBTitle: crystal structure of the disulfide bond isomerase dsbg 43 d1uoua1 not modelled 9.6 9 Fold:Methionine synthase domain-like Superfamily:Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain Family:Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain 44 c2p0oA_ not modelled 9.5 19 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:hypothetical protein duf871; PDBTitle: crystal structure of a conserved protein from locus ef_2437 in2 enterococcus faecalis with an unknown function 45 c1jzdA_ not modelled 9.4 11 PDB header:oxidoreductase Chain: A: PDB Molecule:thiol:disulfide interchange protein dsbc; PDBTitle: dsbc-dsbdalpha complex 46 d1eeja1 not modelled 9.3 22 Fold:Thioredoxin fold Superfamily:Thioredoxin-like Family:DsbC/DsbG C-terminal domain-like 47 c3bciA_ not modelled 9.2 13 PDB header:oxidoreductase Chain: A: PDB Molecule:disulfide bond protein a; PDBTitle: crystal structure of staphylococcus aureus dsba 48 c1hyuA_ not modelled 9.1 15 PDB header:oxidoreductase Chain: A: PDB Molecule:alkyl hydroperoxide reductase subunit f; PDBTitle: crystal structure of intact ahpf 49 d1u6pa_ not modelled 8.9 33 Fold:Retrovirus zinc finger-like domains Superfamily:Retrovirus zinc finger-like domains Family:Retrovirus zinc finger-like domains 50 c2yqfA_ not modelled 8.8 9 PDB header:protein binding Chain: A: PDB Molecule:ankyrin-1; PDBTitle: solution structure of the death domain of ankyrin-1 51 c1m6vE_ not modelled 8.7 12 PDB header:ligase Chain: E: PDB Molecule:carbamoyl phosphate synthetase large chain; PDBTitle: crystal structure of the g359f (small subunit) point mutant of2 carbamoyl phosphate synthetase 52 d1uxda_ not modelled 8.6 4 Fold:lambda repressor-like DNA-binding domains Superfamily:lambda repressor-like DNA-binding domains Family:GalR/LacI-like bacterial regulator 53 d1dpua_ not modelled 8.6 11 Fold:DNA/RNA-binding 3-helical bundle Superfamily:"Winged helix" DNA-binding domain Family:C-terminal domain of RPA32 54 c1dpuA_ not modelled 8.6 11 PDB header:dna binding protein Chain: A: PDB Molecule:replication protein a (rpa32) c-terminal domain; PDBTitle: solution structure of the c-terminal domain of human rpa322 complexed with ung2(73-88) 55 c3hd5A_ not modelled 8.4 8 PDB header:oxidoreductase Chain: A: PDB Molecule:thiol:disulfide interchange protein dsba; PDBTitle: crystal structure of a thiol:disulfide interchange protein2 dsba from bordetella parapertussis 56 c3c7mB_ not modelled 8.4 19 PDB header:oxidoreductase Chain: B: PDB Molecule:thiol:disulfide interchange protein dsba-like; PDBTitle: crystal structure of reduced dsbl 57 c3gv1A_ not modelled 8.4 25 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:disulfide interchange protein; PDBTitle: crystal structure of disulfide interchange protein from neisseria2 gonorrhoeae 58 d1ngra_ not modelled 7.6 9 Fold:DEATH domain Superfamily:DEATH domain Family:DEATH domain, DD 59 c3t72o_ not modelled 7.4 5 PDB header:transcription/dna Chain: O: PDB Molecule:pho box dna (strand 1); PDBTitle: phob(e)-sigma70(4)-(rnap-betha-flap-tip-helix)-dna transcription2 activation sub-complex 60 c2kw0A_ not modelled 7.4 0 PDB header:oxidoreductase Chain: A: PDB Molecule:ccmh protein; PDBTitle: solution structure of n-terminal domain of ccmh from escherichia.coli 61 c2jblC_ not modelled 7.4 17 PDB header:electron transport Chain: C: PDB Molecule:photosynthetic reaction center cytochrome c PDBTitle: photosynthetic reaction center from blastochloris viridis 62 c3feuA_ not modelled 7.3 22 PDB header:oxidoreductase Chain: A: PDB Molecule:putative lipoprotein; PDBTitle: crystal structure of dsba-like thioredoxin domain vf_a0457 from vibrio2 fischeri 63 c3h93A_ not modelled 7.3 17 PDB header:transcription regulator Chain: A: PDB Molecule:thiol:disulfide interchange protein dsba; PDBTitle: crystal structure of pseudomonas aeruginosa dsba 64 c2hl7A_ not modelled 7.2 6 PDB header:oxidoreductase Chain: A: PDB Molecule:cytochrome c-type biogenesis protein ccmh; PDBTitle: crystal structure of the periplasmic domain of ccmh from pseudomonas2 aeruginosa 65 c3o6cA_ not modelled 7.1 16 PDB header:transferase Chain: A: PDB Molecule:pyridoxine 5'-phosphate synthase; PDBTitle: pyridoxal phosphate biosynthetic protein pdxj from campylobacter2 jejuni 66 c3msuA_ not modelled 7.1 16 PDB header:transferase Chain: A: PDB Molecule:citrate synthase; PDBTitle: crystal structure of citrate synthase from francisella tularensis 67 c2remB_ not modelled 6.9 25 PDB header:oxidoreductase Chain: B: PDB Molecule:disulfide oxidoreductase; PDBTitle: crystal structure of oxidoreductase dsba from xylella2 fastidiosa 68 d1go3e2 not modelled 6.7 15 Fold:Dodecin subunit-like Superfamily:N-terminal, heterodimerisation domain of RBP7 (RpoE) Family:N-terminal, heterodimerisation domain of RBP7 (RpoE) 69 d1fvka_ not modelled 6.5 22 Fold:Thioredoxin fold Superfamily:Thioredoxin-like Family:DsbA-like 70 d1t33a2 not modelled 6.5 6 Fold:Tetracyclin repressor-like, C-terminal domain Superfamily:Tetracyclin repressor-like, C-terminal domain Family:Tetracyclin repressor-like, C-terminal domain 71 d1abaa_ not modelled 6.5 25 Fold:Thioredoxin fold Superfamily:Thioredoxin-like Family:Thioltransferase 72 c1eysC_ not modelled 6.4 19 PDB header:electron transport Chain: C: PDB Molecule:photosynthetic reaction center; PDBTitle: crystal structure of photosynthetic reaction center from a2 thermophilic bacterium, thermochromatium tepidum 73 d1eysc_ not modelled 6.4 19 Fold:Multiheme cytochromes Superfamily:Multiheme cytochromes Family:Photosynthetic reaction centre (cytochrome subunit) 74 d2c35b2 not modelled 6.4 19 Fold:Dodecin subunit-like Superfamily:N-terminal, heterodimerisation domain of RBP7 (RpoE) Family:N-terminal, heterodimerisation domain of RBP7 (RpoE) 75 d1brwa1 not modelled 6.4 9 Fold:Methionine synthase domain-like Superfamily:Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain Family:Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain 76 c3gykC_ not modelled 6.3 17 PDB header:oxidoreductase Chain: C: PDB Molecule:27kda outer membrane protein; PDBTitle: the crystal structure of a thioredoxin-like oxidoreductase from2 silicibacter pomeroyi dss-3 77 c2w36B_ not modelled 6.3 11 PDB header:hydrolase Chain: B: PDB Molecule:endonuclease v; PDBTitle: structures of endonuclease v with dna reveal initiation of2 deaminated adenine repair 78 c3thgA_ not modelled 6.3 11 PDB header:protein binding Chain: A: PDB Molecule:ribulose bisphosphate carboxylase/oxygenase activase 1, PDBTitle: crystal structure of the creosote rubisco activase c-domain 79 c3oq9C_ not modelled 6.2 9 PDB header:apoptosis Chain: C: PDB Molecule:tumor necrosis factor receptor superfamily member 6; PDBTitle: structure of the fas/fadd death domain assembly 80 d2i5nc1 not modelled 6.2 17 Fold:Multiheme cytochromes Superfamily:Multiheme cytochromes Family:Photosynthetic reaction centre (cytochrome subunit) 81 d1pbwa_ not modelled 6.0 17 Fold:GTPase activation domain, GAP Superfamily:GTPase activation domain, GAP Family:BCR-homology GTPase activation domain (BH-domain) 82 d1eaka1 not modelled 6.0 12 Fold:PGBD-like Superfamily:PGBD-like Family:MMP N-terminal domain 83 d1x4pa1 not modelled 5.9 17 Fold:Surp module (SWAP domain) Superfamily:Surp module (SWAP domain) Family:Surp module (SWAP domain) 84 d1o17a1 not modelled 5.9 14 Fold:Methionine synthase domain-like Superfamily:Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain Family:Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain 85 d2hsga1 not modelled 5.9 8 Fold:lambda repressor-like DNA-binding domains Superfamily:lambda repressor-like DNA-binding domains Family:GalR/LacI-like bacterial regulator 86 c3odnA_ not modelled 5.8 16 PDB header:membrane protein Chain: A: PDB Molecule:dally-like protein; PDBTitle: the crystal structure of drosophila dally-like protein core domain 87 d1ttya_ not modelled 5.8 7 Fold:DNA/RNA-binding 3-helical bundle Superfamily:Sigma3 and sigma4 domains of RNA polymerase sigma factors Family:Sigma4 domain 88 c2qgpA_ not modelled 5.8 11 PDB header:hydrolase Chain: A: PDB Molecule:hnh endonuclease; PDBTitle: x-ray structure of the nhn endonuclease from geobacter2 metallireducens. northeast structural genomics consortium3 target gmr87. 89 c1klsA_ not modelled 5.8 40 PDB header:transcription Chain: A: PDB Molecule:zinc finger y-chromosomal protein; PDBTitle: nmr structure of the zfy-6t[y10l] zinc finger 90 d1qpza1 not modelled 5.8 13 Fold:lambda repressor-like DNA-binding domains Superfamily:lambda repressor-like DNA-binding domains Family:GalR/LacI-like bacterial regulator 91 d1klra_ not modelled 5.7 40 Fold:beta-beta-alpha zinc fingers Superfamily:beta-beta-alpha zinc fingers Family:Classic zinc finger, C2H2 92 c1klrA_ not modelled 5.7 40 PDB header:transcription Chain: A: PDB Molecule:zinc finger y-chromosomal protein; PDBTitle: nmr structure of the zfy-6t[y10f] zinc finger 93 d2cbia2 not modelled 5.7 14 Fold:TIM beta/alpha-barrel Superfamily:(Trans)glycosidases Family:alpha-D-glucuronidase/Hyaluronidase catalytic domain 94 c1xrzA_ not modelled 5.6 40 PDB header:transcription Chain: A: PDB Molecule:zinc finger y-chromosomal protein; PDBTitle: nmr structure of a zinc finger with cyclohexanylalanine2 substituted for the central aromatic residue 95 d2g7la2 not modelled 5.6 10 Fold:Tetracyclin repressor-like, C-terminal domain Superfamily:Tetracyclin repressor-like, C-terminal domain Family:Tetracyclin repressor-like, C-terminal domain 96 c2yx0A_ not modelled 5.6 43 PDB header:metal binding protein Chain: A: PDB Molecule:radical sam enzyme; PDBTitle: crystal structure of p. horikoshii tyw1 97 c2lcvA_ not modelled 5.5 10 PDB header:transcription regulator Chain: A: PDB Molecule:hth-type transcriptional repressor cytr; PDBTitle: structure of the cytidine repressor dna-binding domain; an alternate2 calculation 98 c3ghaA_ not modelled 5.3 19 PDB header:oxidoreductase Chain: A: PDB Molecule:disulfide bond formation protein d; PDBTitle: crystal structure of etda-treated bdbd (reduced) 99 d2w6ka1 not modelled 5.2 15 Fold:CobE/GbiG C-terminal domain-like Superfamily:CobE/GbiG C-terminal domain-like Family:CobE/GbiG C-terminal domain-like