88 d1in4a2 Probab=91.85   E-value=0.89  Score=23.88  Aligned_columns=187  Identities=18%

Q ss_pred             CCCCEEEEECCCCCHHHHHHHHHHCCCCCCCCEEEEECCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHH
Q ss_conf             79806998078845899999997324434660365425001210125555311332221015789999899999999987
Q batch____        40 TDDRTIVVGRRGTGKSALFIQLNEHWKKDKKILILSFSPDDSQIIGFRSMLKPFTGSFNLARAATRLLWRYAMLMEIASY  119 (698)
Q Consensus        40 s~~kfLIIGRKGSGKTAL~~yL~e~~~~~~~i~vl~~~P~d~~i~~l~~ilq~~~~~~~ll~~~y~~lWK~vIlveIak~  119 (698)
                      +.+..|+.|.-|+|||.+.+.+....    +.......+.+....                                   
T Consensus        34 ~~~~iLl~GppG~GKT~la~~ia~~l----~~~~~~~~~~~~~~~-----------------------------------   74 (223)
T d1in4a2          34 VLDHVLLAGPPGLGKTTLAHIIASEL----QTNIHVTSGPVLVKQ-----------------------------------   74 (223)
T ss_dssp             CCCCEEEESSTTSSHHHHHHHHHHHH----TCCEEEEETTTCCSH-----------------------------------
T ss_pred             CCCEEEEECCCCCCHHHHHHHHHHHH----CCCEEEEEECCEEEE-----------------------------------
T ss_conf             57738997589978647999999984----898799841000110-----------------------------------


Q ss_pred             HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEE
Q ss_conf             40355401245568888987554234211167777777764202111123444555455589999999999850478599
Q batch____       120 ISSHYKLSSQISSETLLNEHLKKWNSAQGDILRKCRLVAKEYLDENNPEESIGDLQFNLNISEIENNIVSLLERSDRKVV  199 (698)
Q Consensus       120 L~~~~k~~~e~~~kkll~e~l~~~~s~~g~~~~k~~~~~k~~L~e~~~e~~i~~~~~~v~l~eLe~~Ii~lL~~s~~kv~  199 (698)
                                                                                       .............-.
T Consensus        75 -----------------------------------------------------------------~~~~~~~~~~~~~~~   89 (223)
T d1in4a2          75 -----------------------------------------------------------------GDMAAILTSLERGDV   89 (223)
T ss_dssp             -----------------------------------------------------------------HHHHHHHHHCCTTCE
T ss_pred             -----------------------------------------------------------------CCCHHHHHHHCCCCC
T ss_conf             -----------------------------------------------------------------000123555303550


Q ss_pred             EEEECCHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEHHHHHHHHCCCCCCHHHHHCCCEEEEEECHHHHHHHH
Q ss_conf             99842021146675579999999999999974136640899870668964015663256653034378751868999999
Q batch____       200 ILMDKLDEAYEPDNIGIGIIAGLAYASIELNQKAKCIRPIIFLRDNIFRSLSKEDPDYSRNIEGQVIRLHWDWAQLLMLS  279 (698)
Q Consensus       200 I~IDeLDe~w~~se~~~~~I~aLL~Aa~eln~~~k~iRviIfLRsDIf~~l~~~d~Dk~~k~es~~v~L~Ws~~~L~~Li  279 (698)
                      +++|+.+.....      ....++.+..+.......+.+++.-      .................+.+.--..+-...+
T Consensus        90 ~~~D~~~~~~~~------~~~~~~~~l~~~~~~~~~~~~i~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  157 (223)
T d1in4a2          90 LFIDEIHRLNKA------VEELLYSAIEDFQIDIQPFTLVGAT------TRSGLLSSPLRSRFGIILELDFYTVKELKEI  157 (223)
T ss_dssp             EEEETGGGCCHH------HHHHHHHHHHTSCCCCCCCEEEEEE------SCGGGSCHHHHTTCSEEEECCCCCHHHHHHH
T ss_pred             EECCCCCCCCHH------HHHHHHHHHHCCCCCCCCEEEEEEC------CCCCCCCCHHHHHHHCCCCCCCCCHHHHHHH
T ss_conf             110000024888------9999999984010022780699960------6853234023321000022469998999999


Q ss_pred             HHHHHHHCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHH
Q ss_conf             9998761234455320026775201137730688898420789058999999999852126844118899999999998
Q batch____       280 AKRMKVAFKLDIEKDQRVWDRCTADDLKGRNGFKRCLQFTLYRPRDLLSLLNEAFFSAFRENRETIINTDLEYAAKSIS  358 (698)
Q Consensus       280 ~kRI~~~~~~~~~~~~~~~~~iF~~~v~g~~~f~yil~rTl~RPRDiIqllN~~~~~A~~~~~~~I~~~~i~~a~~~YS  358 (698)
                      .+++....+.....                +...+|.+++.+-||+++.++..++..|...+...|+.+++.++....+
T Consensus       158 l~~~~~~~~~~~~~----------------~~l~~i~~~~~g~~R~~~~~l~~~~~~a~~~~~~~it~~~v~~~l~~~~  220 (223)
T d1in4a2         158 IKRAASLMDVEIED----------------AAAEMIAKRSRGTPRIAIRLTKRVRDMLTVVKADRINTDIVLKTMEVLN  220 (223)
T ss_dssp             HHHHHHHTTCCBCH----------------HHHHHHHHTSTTCHHHHHHHHHHHHHHHHHHTCSSBCHHHHHHHHHHHT
T ss_pred             HHHHHHHCCCCCCH----------------HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCC
T ss_conf             99999862899876----------------8999999971999899999999999999970889879899999997518