9 c3iraA_ Probab=99.78   E-value=6.5e-19  Score=145.77  Aligned_columns=126  Identities=14%

Q ss_pred             CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEEEEECCCCCCHHHHHHHHCCCHHHHHHH-CCCEEEEEEECCC
Q ss_conf             367888777645567643358117569899728980999976377801887676651998999985-1853999992289
Q batch____       435 AFGATHTAQTQTHLNFTQIKTVDELNQALVEAKGKPVMLDLYADWCVACKEFEKYTFSDPQVQKAL-ADTVLLQANVTAN  513 (565)
Q Consensus       435 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ala~~~GKpVlVDF~A~WC~~Ck~me~~v~~~~~v~~~l-~~~v~l~~D~T~~  513 (565)
                      ...+.++.-.+.......|+...+.+++.|+.+||||||+|+++||..||.|++.+|.|++|.+.+ ++||.+++|.++.
T Consensus         6 l~~~~spyl~~~a~~pI~W~~~~~eal~~Ak~~~Kpi~l~~~a~wC~~C~~m~~~~f~d~~v~~~ln~~FV~vkvD~ee~   85 (172)
T c3iraA_           6 LIKEKSPYLLQHAYNPVDWYPWGEEAFEKARKENKPVFLSIGYSTCHWCHMMAHESFEDEEVAGLMNEAFVSIKVDREER   85 (172)
T ss_dssp             GGGCCCHHHHTTTTSSSCCBCSSHHHHHHHHHHTCCEEEEEECTTCHHHHHHHHHTTTCHHHHHHHHHHCEEEEEETTTC
T ss_pred             CCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHCCHHHHHHHHCCCEEEEECCCCC
T ss_conf             22279705874240575841579999999997399099998507872144556776342889999664915999628868


Q ss_pred             CHHHHHHHHHC----CCCCCCEEEEECCCCCCCCCCCEEEEECHHH------HHHHHHHC
Q ss_conf             98899999975----9854867999989986731675211018899------99987502
Q batch____       514 DAQDVALLKHL----NVLGLPTILFFDGQGQEHPQARVTGFMDAET------FSAHLRDR  563 (565)
Q Consensus       514 ~~~~~~ll~~~----g~~g~P~~~f~~~dG~~~~~~r~~G~~~~~~------l~~~L~~l  563 (565)
                      .+-++.+++..    |..|.|+++|+++||+.+   ...+++.++.      |++.|+++
T Consensus        86 pdl~~~y~~~~~~~~g~~G~P~~vfltPdgkp~---~~~tY~P~~~~~~~~~f~~~L~~i  142 (172)
T c3iraA_          86 PDIDNIYMTVCQIILGRGGWPLNIIMTPGKKPF---FAGTYIPKNTRFNQIGMLELVPRI  142 (172)
T ss_dssp             HHHHHHHHHHHHHHHSCCCSSEEEEECTTSCEE---EEESSCCSSCBTTBCCHHHHHHHH
T ss_pred             CCHHHHHHHHHHHHHCCCCCCEEEEECCCCCEE---EEECCCCCCCCCCCCCHHHHHHHH
T ss_conf             107899999999870889983699996899877---630335877657810189999999