15/01/2012 18:00:25 : INFO  : Run start: Sun Jan 15 18:00:25 GMT 2012
15/01/2012 18:00:28 : INFO  : Initialised job
15/01/2012 18:00:29 : INFO  : Renaming log file 'phyre2_20120115_180025.log' to '/bmm/www/servers/phyre2/public_html/phyre2_output/efb528c863f98b07/phyre_20120115_180025.log'
15/01/2012 18:00:29 : INFO  : Initialised job:
Sequence
>batch____
MEPKTKKQRSLYIPYAGPVLLEFPLLNKGSAFSMEERRNFNLLGLLPEVVETIEEQAERA
WIQYQGFKTEIDKHIYLRNIQDTNETLFYRLVNNHLDEMMPVIYTPTVGAACERFSEIYR
RSRGVFISYQNRHNMDDILQNVPNHNIKVIVVTDGERILGLGDQGIGGMGIPIGKLSLYT
ACGGISPAYTLPVVLDVGTNNQQLLNDPLYMGWRNPRITDDEYYEFVDEFIQAVKQRWPD
VLLQFEDFAQKNAMPLLNRYRNEICSFNDDIQGTAAVTVGTLIAASRAAGGQLSEKKIVF
LGAGSAGCGIAEMIISQTQREGLSEEAARQKVFMVDRFGLLTDKMPNLLPFQTKLVQKRE
NLSDWDTDSDVLSLLDVVRNVKPDILIGVSGQTGLFTEEIIREMHKHCPRPIVMPLSNPT
SRVEATPQDIIAWTEGNALVATGSPFNPVVWKDKIYPIAQCNNAFIFPGIGLGVIASGAS
RITDEMLMSASETLAQYSPLVLNGEGMVLPELKDIQKVSRAIAFAVGKMAQQQGVAVKTS
AEALQQAIDDNFWQAEYRDYRRTSI

15/01/2012 18:00:30 : INFO  : Checked sequence
15/01/2012 18:00:31 : INFO  : Finding homologues with PSI-BLAST
15/01/2012 18:00:31 : INFO  : PSI-BLAST 3 iterations
15/01/2012 18:03:10 : INFO  : PSI-BLAST 5 iterations
15/01/2012 18:05:52 : INFO  : Finished PSI-BLAST
15/01/2012 18:05:52 : INFO  : Running Buildali to generate a3m file
15/01/2012 18:14:46 : INFO  : Converting to HMM
15/01/2012 18:14:49 : INFO  : Calibrating HMM
15/01/2012 18:15:06 : INFO  : Searching HMM database
15/01/2012 18:25:27 : INFO  : Finished buildali
15/01/2012 18:25:29 : INFO  : Predicting secondary structure
15/01/2012 18:25:36 : INFO  : Predicted secondary structure (PSI-Pred)
15/01/2012 18:25:38 : INFO  : Predicting Disordered regions
15/01/2012 18:25:42 : INFO  : Predicted Disorder (Disopred)
15/01/2012 18:25:44 : INFO  : Running memsat_svm check
15/01/2012 18:25:59 : INFO  : Globular protein
15/01/2012 18:26:00 : INFO  : Predicted Transmembrane (memsat_svm) ID 'efb528c863f98b07'
15/01/2012 18:26:02 : INFO  : Initialising fold library search
15/01/2012 18:26:05 : INFO  : Initialised search input
15/01/2012 18:26:07 : INFO  : Building Ensemble models
15/01/2012 18:26:11 : INFO  : Building hh.c1o0sB_.model.1.pdb
15/01/2012 18:26:27 : INFO  : Building hh.c1gz3B_.model.2.pdb
15/01/2012 18:26:37 : INFO  : cpying /bmm/www/servers/phyre2/public_html/phyre2_output/efb528c863f98b07/hh.c1gz3B_.model.2.pdb to /bmm/www/servers/phyre2/public_html/phyre2_output/efb528c863f98b07/c1gz3B_.2.pdb
15/01/2012 18:26:40 : INFO  : Building hh.c1qr6A_.model.3.pdb
15/01/2012 18:26:49 : INFO  : cpying /bmm/www/servers/phyre2/public_html/phyre2_output/efb528c863f98b07/hh.c1qr6A_.model.3.pdb to /bmm/www/servers/phyre2/public_html/phyre2_output/efb528c863f98b07/c1qr6A_.3.pdb
15/01/2012 18:26:54 : INFO  : Building hh.c2aw5A_.model.4.pdb
15/01/2012 18:27:04 : INFO  : cpying /bmm/www/servers/phyre2/public_html/phyre2_output/efb528c863f98b07/hh.c2aw5A_.model.4.pdb to /bmm/www/servers/phyre2/public_html/phyre2_output/efb528c863f98b07/c2aw5A_.4.pdb
15/01/2012 18:27:07 : INFO  : Building c1o0sB_.1.pdb
15/01/2012 18:27:17 : INFO  : Building c1gz3B_.2.pdb
15/01/2012 18:27:28 : INFO  : Building c1qr6A_.3.pdb
15/01/2012 18:27:42 : INFO  : Building c2aw5A_.4.pdb
15/01/2012 18:27:55 : INFO  : Building c3nv9A_.5.pdb
15/01/2012 18:28:09 : INFO  : Building c1ww8A_.6.pdb
15/01/2012 18:28:20 : INFO  : Building c1vl6C_.7.pdb
15/01/2012 18:28:32 : INFO  : Building c2a9fB_.8.pdb
15/01/2012 18:28:45 : INFO  : Building d1o0sa2.9.pdb
15/01/2012 18:28:58 : INFO  : Building d1pj3a2.10.pdb
15/01/2012 18:29:14 : INFO  : Building d1gq2a2.11.pdb
15/01/2012 18:29:31 : INFO  : Building d1o0sa1.12.pdb
15/01/2012 18:29:45 : INFO  : Building d1pj3a1.13.pdb
15/01/2012 18:30:00 : INFO  : Building d1gq2a1.14.pdb
15/01/2012 18:30:14 : INFO  : Building d1vl6a1.15.pdb
15/01/2012 18:30:25 : INFO  : Building d1vl6a2.16.pdb
15/01/2012 18:30:39 : INFO  : Building d1euza1.17.pdb
15/01/2012 18:30:52 : INFO  : Building d1li4a1.18.pdb
15/01/2012 18:31:05 : INFO  : Building c3n58D_.19.pdb
15/01/2012 18:31:20 : INFO  : Building d1v9la1.20.pdb
15/01/2012 18:33:00 : INFO  : Finished HH model building
15/01/2012 18:33:02 : WARN  : Set python to /bmm/www/servers/phyre2/bin//newpython/python2.6
15/01/2012 18:34:16 : INFO  : html domain output complete ID 'efb528c863f98b07'
15/01/2012 21:37:06 : INFO  : Run end  : Sun Jan 15 21:37:04 GMT 2012
