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| Job Description | P24554 | | Confidence | 97.50% | Date | Thu Jan 5 11:41:40 GMT 2012 |
| Rank | 158 | Aligned Residues | 97 |
| % Identity | 18% | Template | c2v3cC_ |
| PDB info |
PDB header:signaling protein | Chain: C: PDB Molecule:signal recognition 54 kda protein; |
PDBTitle: crystal structure of the srp54-srp19-7s.s srp rna complex2 of m. jannaschii
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| Resolution | 2.50 Å |
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82 | . | . | . | . | . | . | . | 90 | . | . | . | |
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. | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | |
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| Query Sequence |   |
K | E | F | D | R | V | L | G | G | G | V | V | . |
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P | G | S | A | I | L | I | G | G | N | P | G | A | G | K | S | T | L | L | L | Q | T | L | C | K | L | A | . |
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| Template Conservation |   |
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| Template Sequence |   |
E | E | L | V | K | L | L | G | E | E | A | K | K | L | E | L | N | P | K | K | Q | N | V | I | L | L | V | G | I | Q | G | S | G | K | T | T | T | A | A | K | L | A | R | Y | I | Q | K | R | G | L | K | P | A | L | I | A | A | D | T | Y | R | P | A | A | Y | E | Q | L | K | Q | L | A | E | K | I | H | V | P | I | Y |
| Template Known Secondary structure |   |
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| Template Predicted Secondary structure |   |
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80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . |
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150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | |
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| Predicted Secondary structure |   |
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| Query Sequence |   |
N | L | N | M | L | S | E | T | S | I | E | Q | I | C | L | I | A | E | E | E | Q | . |
P | K | L | M | V | I | D | S |
| Query Conservation |   |
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| Alig confidence |   |
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| Template Conservation |   |
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| Template Sequence |   |
G | D | E | T | R | T | K | S | P | V | D | I | V | K | E | G | M | E | K | F | K | K | A | D | V | L | I | I | D | T |
| Template Known Secondary structure |   |
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| S | S | S | T | T |  |  |  |  |  |  | T | T | S | S |
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| Template Predicted Secondary structure |   |
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| Template SS confidence |   |
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160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . |
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No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
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