236 c3nhaA_ Probab=96.85   E-value=0.0066  Score=40.53  Aligned_columns=118  Identities=24%

Q ss_pred             CCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCCEEEEECCCCHH-HHHHHHHHCCCCHHHEEEEC------------CCC
Q ss_conf             44761899973898889899999999843899499997269999-99999998299810137706------------789
Q batch____        92 VVPGSAILIGGNPGAGKSTLLLQTLCKLAQQMKTLYVTGEESLQ-QVAMRAHRLGLPTDNLNMLS------------ETS  158 (460)
Q Consensus        92 l~~G~viLI~G~PGvGKTtLalqiA~~la~g~~vlyvsgEes~~-qI~~ra~rlg~~~~~l~l~~------------e~~  158 (460)
                      +.+|+++.|.|+.|+|||||+..++....-..-.+++.+..-.. .......+.+....+-++..            ...
T Consensus        63 i~~Ge~~~i~G~nGsGKSTLl~~l~gl~~~~~G~i~~~g~~~~~~~~~~~~~~i~~i~q~~~~~~~tv~eni~~~~~~~~  142 (278)
T c3nhaA_          63 VMPGQTLALVGPSGAGKSTILRLLFRFYDISSGCIRIDGQDISQVTQASLRSHIGVVPQDTVLFNDTIADNIRYGRVTAG  142 (278)
T ss_dssp             ECTTCEEEEECSTTSSHHHHHHHHTTSSCCSEEEEEETTEEGGGSCHHHHHHTEEEECSSCCCCSEEHHHHHHTTSTTCC
T ss_pred             EECCCEEEEECCCCCCCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCCCCCEEEEEECCCCCHHHHHHHHHHCCCCC
T ss_conf             61795899985766675326899985065111222221012443210123442115642034430018887541121110


Q ss_pred             HHHHHHHHHHH----------------------------------------CCCEEEECCHHHHCCCCCCCCCCCHHHHH
Q ss_conf             99999999850----------------------------------------99799986776731333366767589999
Q batch____       159 IEQICLIAEEE----------------------------------------QPKLMVIDSIQVMHMADVQSSPGSVAQVR  198 (460)
Q Consensus       159 l~~i~~~i~~~----------------------------------------~~~liVIDsiqtl~~~~~~~~~~~~sqVr  198 (460)
                      ...+....+..                                        +|+++++|--         ...-|....+
T Consensus       143 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~lS~G~~qrl~laral~~~~~ililDEp---------ts~lD~~~~~  213 (278)
T c3nhaA_         143 NDEVEAAAQAAGIHDAIMAFPEGYRTQVGERGLKLSGGEKQRVAIARTILKAPGIILLDEA---------TSALDTSNER  213 (278)
T ss_dssp             HHHHHHHHHHHTCHHHHHTSTTGGGCEESTTSBCCCHHHHHHHHHHHHHHHCCSEEEEECC---------SSCCCHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCHHHHCCC---------CCCCCHHHHH
T ss_conf             2358999997413445541755554320246664332100000122101221100332073---------2357889999


Q ss_pred             HHHHHHHHHHHHCCCCEEEEEE
Q ss_conf             9999999999981996999975
Q batch____       199 ETAAYLTRFAKTRGVAIVMVGH  220 (460)
Q Consensus       199 ~~~~~L~~lAK~~~i~vilv~h  220 (460)
                      .+...+..+++  +.+++++.|
T Consensus       214 ~i~~~i~~~~~--~~tvi~itH  233 (278)
T c3nhaA_         214 AIQASLAKVCA--NRTTIVVAH  233 (278)
T ss_dssp             HHHHHHHHHHT--TSEEEEECC
T ss_pred             HHHHHHHHHCC--CCEEEEEEC
T ss_conf             99999854328--987999809