52 c3b9qA_ Probab=98.20   E-value=5.6e-05  Score=55.48  Aligned_columns=123  Identities=22%

Q ss_pred             HCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHC-CCCCEEEEECCC----CHHHHHHHHHHCCCCHHHEEEECC-CCHHH
Q ss_conf             369844761899973898889899999999843-899499997269----999999999982998101377067-89999
Q batch____        88 LGGGVVPGSAILIGGNPGAGKSTLLLQTLCKLA-QQMKTLYVTGEE----SLQQVAMRAHRLGLPTDNLNMLSE-TSIEQ  161 (460)
Q Consensus        88 LgGGl~~G~viLI~G~PGvGKTtLalqiA~~la-~g~~vlyvsgEe----s~~qI~~ra~rlg~~~~~l~l~~e-~~l~~  161 (460)
                      +..+.-+..++++.||+|+||||.+..+|..+. +|.+++.+++..    ..+|++..+++++.........++ ..+..
T Consensus        91 ~~~~~~~~~vi~~vG~~G~GKTTt~aklA~~~~~~g~~v~li~~Dt~R~gA~eQL~~~a~~~gv~~~~~~~~~~~~~~~~  170 (298)
T c3b9qA_          91 LQLGFRKPAVIMIVGVNGGGKTTSLGKLAHRLKNEGTKVLMAAGDTFRAAASDQLEIWAERTGCEIVVAEKAKAATVLSK  170 (298)
T ss_dssp             CCCCSSSCEEEEEECCTTSCHHHHHHHHHHHHHHTTCCEEEECCCCSCHHHHHHHHHHHHHHTCEEECCCCCCHHHHHHH
T ss_pred             CCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHCCEEEECCCCCHHHHHHH
T ss_conf             10016897699997288876556999999999967991799856876746899999998873980897289887999999


Q ss_pred             HHHHHHHHCCCEEEECCHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHH---HCCCCEEEE
Q ss_conf             999998509979998677673133336676758999999999999999---819969999
Q batch____       162 ICLIAEEEQPKLMVIDSIQVMHMADVQSSPGSVAQVRETAAYLTRFAK---TRGVAIVMV  218 (460)
Q Consensus       162 i~~~i~~~~~~liVIDsiqtl~~~~~~~~~~~~sqVr~~~~~L~~lAK---~~~i~vilv  218 (460)
                      ........+.++++||.-        .-.+.+...+.+....+.-+.+   ....-++||
T Consensus       171 ~~~~~~~~~~D~IlIDTa--------Gr~~~~~~~~~el~~~~~~~~~~~~~~p~~~~LV  222 (298)
T c3b9qA_         171 AVKRGKEEGYDVVLCDTS--------GRLHTNYSLMEELIACKKAVGKIVSGAPNEILLV  222 (298)
T ss_dssp             HHHHHHHTTCSEEEECCC--------CCSSCCHHHHHHHHHHHHHHHTTSTTCCSEEEEE
T ss_pred             HHHHHHHCCCCEEEECCC--------CCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEE
T ss_conf             999999679979998188--------8887757999999999998630345688528999