19/01/2012 10:52:02 : INFO  : Run start: Thu Jan 19 10:52:01 GMT 2012
19/01/2012 10:52:09 : INFO  : Initialised job
19/01/2012 10:52:11 : INFO  : Renaming log file 'phyre2_20120119_105200.log' to '/bmm/www/servers/phyre2/public_html/phyre2_output/efa9b02336edc441/phyre_20120119_105200.log'
19/01/2012 10:52:14 : INFO  : Initialised job:
Sequence
>batch____
MKRIITGCLLLNFAMAAQAECNISSSIQNIDYGKRSAAMRQVDRGKTTQLADRTITLVMQ
CDQDAHIRVQLNTANISNNGFGFGPNGSLNLIASDAFSGSNNLDLALASGKNDNPGSTGT
ASISTSPNNWLVFMQNGQEVVIDSGKSVSLTLTMAPAFKDEGELTDMTDITGNLTVLVEA
K

19/01/2012 10:52:15 : INFO  : Checked sequence
19/01/2012 10:52:20 : INFO  : Finding homologues with PSI-BLAST
19/01/2012 10:52:22 : INFO  : PSI-BLAST 3 iterations
19/01/2012 10:53:30 : INFO  : PSI-BLAST 5 iterations
19/01/2012 10:54:29 : INFO  : Finished PSI-BLAST
19/01/2012 10:54:32 : INFO  : Running Buildali to generate a3m file
19/01/2012 10:58:13 : INFO  : Converting to HMM
19/01/2012 10:58:15 : INFO  : Calibrating HMM
19/01/2012 10:58:30 : INFO  : Searching HMM database
19/01/2012 11:03:06 : INFO  : Finished buildali
19/01/2012 11:03:09 : INFO  : Predicting secondary structure
19/01/2012 11:03:20 : INFO  : Predicted secondary structure (PSI-Pred)
19/01/2012 11:03:23 : INFO  : Predicting Disordered regions
19/01/2012 11:03:29 : INFO  : Predicted Disorder (Disopred)
19/01/2012 11:03:34 : INFO  : Running memsat_svm check
19/01/2012 11:07:15 : INFO  : Globular protein
19/01/2012 11:07:16 : INFO  : Predicted Transmembrane (memsat_svm) ID 'efa9b02336edc441'
19/01/2012 11:07:18 : INFO  : Initialising fold library search
19/01/2012 11:07:23 : INFO  : Initialised search input
19/01/2012 11:07:28 : INFO  : Building Ensemble models
19/01/2012 11:07:33 : INFO  : Building hh.c2w07B_.model.1.pdb
19/01/2012 11:07:50 : INFO  : Building hh.c3bfwA_.model.2.pdb
19/01/2012 11:08:04 : INFO  : cpying /bmm/www/servers/phyre2/public_html/phyre2_output/efa9b02336edc441/hh.c3bfwA_.model.2.pdb to /bmm/www/servers/phyre2/public_html/phyre2_output/efa9b02336edc441/c3bfwA_.2.pdb
19/01/2012 11:08:09 : INFO  : Building hh.c3jwnK_.model.3.pdb
19/01/2012 11:08:27 : INFO  : cpying /bmm/www/servers/phyre2/public_html/phyre2_output/efa9b02336edc441/hh.c3jwnK_.model.3.pdb to /bmm/www/servers/phyre2/public_html/phyre2_output/efa9b02336edc441/c3jwnK_.3.pdb
19/01/2012 11:08:31 : INFO  : Building hh.c1klfP_.model.4.pdb
19/01/2012 11:08:45 : INFO  : cpying /bmm/www/servers/phyre2/public_html/phyre2_output/efa9b02336edc441/hh.c1klfP_.model.4.pdb to /bmm/www/servers/phyre2/public_html/phyre2_output/efa9b02336edc441/c1klfP_.4.pdb
19/01/2012 11:08:50 : INFO  : Building hh.c3jwnE_.model.5.pdb
19/01/2012 11:09:04 : INFO  : cpying /bmm/www/servers/phyre2/public_html/phyre2_output/efa9b02336edc441/hh.c3jwnE_.model.5.pdb to /bmm/www/servers/phyre2/public_html/phyre2_output/efa9b02336edc441/c3jwnE_.5.pdb
19/01/2012 11:09:10 : INFO  : Building hh.d1ze3h1.model.6.pdb
19/01/2012 11:09:26 : INFO  : cpying /bmm/www/servers/phyre2/public_html/phyre2_output/efa9b02336edc441/hh.d1ze3h1.model.6.pdb to /bmm/www/servers/phyre2/public_html/phyre2_output/efa9b02336edc441/d1ze3h1.6.pdb
19/01/2012 11:09:30 : INFO  : Building hh.d1n12a_.model.7.pdb
19/01/2012 11:09:46 : INFO  : cpying /bmm/www/servers/phyre2/public_html/phyre2_output/efa9b02336edc441/hh.d1n12a_.model.7.pdb to /bmm/www/servers/phyre2/public_html/phyre2_output/efa9b02336edc441/d1n12a_.9.pdb
19/01/2012 11:09:51 : INFO  : Building c2w07B_.1.pdb
19/01/2012 11:10:07 : INFO  : Building c3bfwA_.2.pdb
19/01/2012 11:10:22 : INFO  : Building c3jwnK_.3.pdb
19/01/2012 11:10:41 : INFO  : Building c1klfP_.4.pdb
19/01/2012 11:10:58 : INFO  : Building c3jwnE_.5.pdb
19/01/2012 11:11:13 : INFO  : Building d1ze3h1.6.pdb
19/01/2012 11:11:28 : INFO  : Building c3jwnL_.7.pdb
19/01/2012 11:11:45 : INFO  : Building c3jwnF_.8.pdb
19/01/2012 11:12:00 : INFO  : Building d1n12a_.9.pdb
19/01/2012 11:12:16 : INFO  : Building c2jtyA_.10.pdb
19/01/2012 11:12:30 : INFO  : Building d2uy6b1.11.pdb
19/01/2012 11:12:46 : INFO  : Building d2j2zb1.12.pdb
19/01/2012 11:13:02 : INFO  : Building d1pdkb_.13.pdb
19/01/2012 11:13:20 : INFO  : Building c2wmpB_.14.pdb
19/01/2012 11:13:35 : INFO  : Building c2vsvB_.15.pdb
19/01/2012 11:13:48 : INFO  : Building c3qbtH_.16.pdb
19/01/2012 11:14:03 : INFO  : Building d1r6ja_.17.pdb
19/01/2012 11:14:19 : INFO  : Building c1r6jA_.18.pdb
19/01/2012 11:14:35 : INFO  : Building c1nteA_.19.pdb
19/01/2012 11:14:52 : INFO  : Building c3khfA_.20.pdb
19/01/2012 11:17:13 : INFO  : Finished HH model building
19/01/2012 11:17:15 : WARN  : Set python to /bmm/www/servers/phyre2/bin//newpython/python2.6
19/01/2012 11:18:35 : INFO  : html domain output complete ID 'efa9b02336edc441'
19/01/2012 11:50:25 : INFO  : Run end  : Thu Jan 19 11:50:23 GMT 2012
