BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= batch____ (368 letters) Database: uniref50.fasta 3,077,464 sequences; 1,040,396,356 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value UniRef50_A1STI9 tRNA-specific 2-thiouridylase mnmA n=4 Tax=Prote... 580 e-164 UniRef50_D0X1F3 tRNA (5-methylaminomethyl-2-thiouridylate)-methy... 578 e-163 UniRef50_A6W0E1 tRNA-specific 2-thiouridylase mnmA n=20 Tax=Bact... 513 e-144 UniRef50_Q4FSB4 tRNA-specific 2-thiouridylase mnmA n=635 Tax=Bac... 479 e-134 UniRef50_B1YTE9 tRNA-specific 2-thiouridylase mnmA n=310 Tax=cel... 432 e-119 UniRef50_D1SR18 tRNA (5-methylaminomethyl-2-thiouridylate)-methy... 403 e-111 UniRef50_A2SLT0 tRNA-specific 2-thiouridylase mnmA n=1 Tax=Methy... 400 e-110 UniRef50_Q6MA75 tRNA-specific 2-thiouridylase mnmA n=15 Tax=Bact... 390 e-107 UniRef50_B0U6Q7 tRNA-specific 2-thiouridylase mnmA n=7 Tax=Xylel... 390 e-107 UniRef50_Q057R1 tRNA-specific 2-thiouridylase mnmA n=6 Tax=Enter... 366 e-100 UniRef50_B5ZBP8 tRNA-specific 2-thiouridylase mnmA n=43 Tax=Bact... 351 2e-95 UniRef50_A1WWV9 tRNA-specific 2-thiouridylase mnmA n=2 Tax=Bacte... 342 2e-92 UniRef50_Q253W3 tRNA-specific 2-thiouridylase mnmA n=3 Tax=Chlam... 339 9e-92 UniRef50_B1VAX7 tRNA-specific 2-thiouridylase mnmA n=4 Tax=Bacte... 329 1e-88 UniRef50_B1AJ41 tRNA-specific 2-thiouridylase mnmA n=13 Tax=Moll... 326 9e-88 UniRef50_A9SZR3 Predicted protein n=1 Tax=Physcomitrella patens ... 322 2e-86 UniRef50_C3ZAA6 Putative uncharacterized protein n=1 Tax=Branchi... 320 4e-86 UniRef50_Q4A7U1 tRNA-specific 2-thiouridylase mnmA n=5 Tax=Molli... 306 7e-82 UniRef50_B5DNY9 GA22395 n=14 Tax=Neoptera RepID=B5DNY9_DROPS 304 3e-81 UniRef50_UPI00016B2149 tRNA (5-methylaminomethyl-2-thiouridylate... 303 5e-81 UniRef50_O75648 Mitochondrial tRNA-specific 2-thiouridylase 1 n=... 295 1e-78 UniRef50_A5FHA9 tRNA-specific 2-thiouridylase mnmA n=26 Tax=Bact... 294 5e-78 UniRef50_D0ND99 tRNA-specific 2-thiouridylase mnmA, putative n=1... 284 3e-75 UniRef50_B0K991 tRNA-specific 2-thiouridylase mnmA 2 n=9 Tax=Clo... 284 5e-75 UniRef50_Q3B625 tRNA-specific 2-thiouridylase mnmA n=10 Tax=Chlo... 283 5e-75 UniRef50_Q503J2 Mitochondrial tRNA-specific 2-thiouridylase 1 n=... 283 6e-75 UniRef50_B1ZZ32 tRNA-specific 2-thiouridylase mnmA n=3 Tax=Verru... 280 8e-74 UniRef50_Q9W5B6 Mitochondrial tRNA-specific 2-thiouridylase 1 n=... 279 1e-73 UniRef50_B7PXE7 tRNA (5-methylaminomethyl-2-thiouridylate)-methy... 279 1e-73 UniRef50_Q7NBZ0 tRNA-specific 2-thiouridylase mnmA n=6 Tax=cellu... 278 2e-73 UniRef50_D2RN19 tRNA(5-methylaminomethyl-2-thiouridylate)-methyl... 277 4e-73 UniRef50_B2UPK4 tRNA-specific 2-thiouridylase mnmA n=1 Tax=Akker... 277 4e-73 UniRef50_A4SBE4 Predicted protein n=2 Tax=Ostreococcus RepID=A4S... 276 6e-73 UniRef50_B3RIL6 Putative uncharacterized protein n=1 Tax=Trichop... 276 6e-73 UniRef50_D2V0M5 Predicted protein n=1 Tax=Naegleria gruberi RepI... 276 7e-73 UniRef50_A5GE36 tRNA-specific 2-thiouridylase mnmA n=20 Tax=Bact... 273 1e-71 UniRef50_C9KPU1 tRNA (5-methylaminomethyl-2-thiouridylate)-methy... 272 2e-71 UniRef50_UPI000069DE11 tRNA (5-methylaminomethyl-2-thiouridylate... 270 8e-71 UniRef50_A8DJE2 tRNA (5-methylaminomethyl-2-thiouridylate)-methy... 268 2e-70 UniRef50_C0E8G4 Putative uncharacterized protein n=1 Tax=Clostri... 268 2e-70 UniRef50_A8Z5W4 tRNA-specific 2-thiouridylase mnmA n=1 Tax=Candi... 266 1e-69 UniRef50_A6LSF2 tRNA-specific 2-thiouridylase mnmA n=19 Tax=Clos... 265 2e-69 UniRef50_C7MLV9 tRNA (5-methylaminomethyl-2-thiouridylate)-methy... 265 2e-69 UniRef50_Q17440 Probable mitochondrial tRNA-specific 2-thiouridy... 264 4e-69 UniRef50_Q3DBK5 TRNA methyl transferase (Fragment) n=5 Tax=cellu... 263 6e-69 UniRef50_B0MKE4 Putative uncharacterized protein n=3 Tax=Clostri... 261 3e-68 UniRef50_C0B5F7 Putative uncharacterized protein n=2 Tax=Lachnos... 261 3e-68 UniRef50_C4ZB38 tRNA (5-methylaminomethyl-2-thiouridylate)-methy... 261 4e-68 UniRef50_D0WIU4 tRNA (5-methylaminomethyl-2-thiouridylate)-methy... 260 7e-68 UniRef50_B0TFA7 tRNA-specific 2-thiouridylase mnmA n=97 Tax=Bact... 259 8e-68 UniRef50_C0WCT5 Putative uncharacterized protein n=1 Tax=Acidami... 259 1e-67 UniRef50_Q4SDW3 Chromosome undetermined SCAF14629, whole genome ... 258 2e-67 UniRef50_C5MCB7 Putative uncharacterized protein n=1 Tax=Candida... 258 3e-67 UniRef50_UPI000180C35A PREDICTED: similar to tRNA 5-methylaminom... 257 6e-67 UniRef50_C7N321 tRNA (5-methylaminomethyl-2-thiouridylate)-methy... 255 2e-66 UniRef50_UPI00016C4B95 tRNA (5-methylaminomethyl-2-thiouridylate... 255 2e-66 UniRef50_B0DQ81 Predicted protein n=4 Tax=Basidiomycota RepID=B0... 255 2e-66 UniRef50_A6BB58 3-oxoacyl-[acyl-carrier-protein] synthase 1 (Fra... 254 2e-66 UniRef50_B5YCZ9 tRNA (5-methylaminomethyl-2-thiouridylate)-methy... 253 1e-65 UniRef50_A8X0Z8 Putative uncharacterized protein n=2 Tax=Caenorh... 252 1e-65 UniRef50_D1BMF0 tRNA(5-methylaminomethyl-2-thiouridylate)-methyl... 252 1e-65 UniRef50_B9CP36 tRNA (5-methylaminomethyl-2-thiouridylate)-methy... 250 6e-65 UniRef50_C0QG63 tRNA (5-methylaminomethyl-2-thiouridylate)-methy... 249 1e-64 UniRef50_B9WA49 tRNA (5-methylaminomethyl-2-thiouridylate)-methy... 248 2e-64 UniRef50_A1BI85 tRNA-specific 2-thiouridylase mnmA n=2 Tax=Chlor... 248 2e-64 UniRef50_B7J5X6 tRNA-specific 2-thiouridylase mnmA n=3 Tax=Acidi... 247 4e-64 UniRef50_A5UV64 tRNA-specific 2-thiouridylase mnmA n=7 Tax=Bacte... 246 7e-64 UniRef50_B5YGH6 tRNA (5-methylaminomethyl-2-thiouridylate)-methy... 244 3e-63 UniRef50_Q8R5X3 tRNA-specific 2-thiouridylase mnmA 1 n=16 Tax=Fu... 244 3e-63 UniRef50_Q0SMH1 tRNA-specific 2-thiouridylase mnmA n=25 Tax=Bact... 243 9e-63 UniRef50_B9GF12 Predicted protein n=6 Tax=Viridiplantae RepID=B9... 242 1e-62 UniRef50_C8W7A2 tRNA(5-methylaminomethyl-2-thiouridylate)-methyl... 242 1e-62 UniRef50_Q73PV6 tRNA-specific 2-thiouridylase mnmA n=2 Tax=Trepo... 242 1e-62 UniRef50_C1XSA6 tRNA (5-methylaminomethyl-2-thiouridylate)-methy... 242 1e-62 UniRef50_Q6BSZ3 DEHA2D04818p n=6 Tax=Saccharomycetales RepID=Q6B... 241 2e-62 UniRef50_D0LWB4 tRNA(5-methylaminomethyl-2-thiouridylate)-methyl... 240 6e-62 UniRef50_Q2RZN9 tRNA-specific 2-thiouridylase mnmA n=11 Tax=Bact... 240 8e-62 UniRef50_C9LN41 tRNA (5-methylaminomethyl-2-thiouridylate)-methy... 239 1e-61 UniRef50_Q9SYD2 F11M15.16 protein n=14 Tax=Magnoliophyta RepID=Q... 238 2e-61 UniRef50_A2CB44 tRNA-specific 2-thiouridylase mnmA n=60 Tax=cell... 238 3e-61 UniRef50_B0SG84 tRNA-specific 2-thiouridylase mnmA n=6 Tax=Lepto... 237 4e-61 UniRef50_O13947 Mitochondrial tRNA-specific 2-thiouridylase 1 n=... 237 6e-61 UniRef50_B8P9F0 Predicted protein n=1 Tax=Postia placenta Mad-69... 236 7e-61 UniRef50_Q1J090 tRNA-specific 2-thiouridylase mnmA n=5 Tax=Deino... 236 1e-60 UniRef50_Q7TTZ4 tRNA-specific 2-thiouridylase mnmA n=2 Tax=Planc... 235 2e-60 UniRef50_Q1IPC9 tRNA-specific 2-thiouridylase mnmA n=2 Tax=Bacte... 235 2e-60 UniRef50_C9RNM8 tRNA (5-methylaminomethyl-2-thiouridylate)-methy... 234 3e-60 UniRef50_B8CCP6 tRNA-methyltransferase (Fragment) n=1 Tax=Thalas... 234 4e-60 UniRef50_B3DUT9 tRNA(5-methylaminomethyl-2-thiouridine)-methyltr... 234 4e-60 UniRef50_C3J919 tRNA (5-methylaminomethyl-2-thiouridylate)-methy... 234 4e-60 UniRef50_C1A7G2 tRNA-specific 2-thiouridylase MnmA n=1 Tax=Gemma... 234 5e-60 UniRef50_Q6C0F9 YALI0F25069p n=1 Tax=Yarrowia lipolytica RepID=Q... 234 5e-60 UniRef50_C8WLL2 tRNA(5-methylaminomethyl-2-thiouridylate)-methyl... 233 7e-60 UniRef50_Q1NYA2 TRNA (5-methylaminomethyl-2-thiouridylate)-methy... 233 1e-59 UniRef50_Q0F280 TRNA (5-methylaminomethyl-2-thiouridylate)-methy... 233 1e-59 UniRef50_Q5L8X6 tRNA-specific 2-thiouridylase mnmA 3 n=6 Tax=Bac... 232 1e-59 UniRef50_C2KV29 tRNA (5-methylaminomethyl-2-thiouridylate)-methy... 232 2e-59 UniRef50_UPI000197B781 hypothetical protein BACCOPRO_02286 n=1 T... 231 2e-59 UniRef50_B7G8R2 Predicted protein (Fragment) n=1 Tax=Phaeodactyl... 231 3e-59 UniRef50_D1XXK1 tRNA (5-methylaminomethyl-2-thiouridylate)-methy... 231 3e-59 UniRef50_Q5PBB1 tRNA-specific 2-thiouridylase mnmA n=21 Tax=cell... 231 4e-59 UniRef50_P75365 tRNA-specific 2-thiouridylase mnmA n=2 Tax=Mycop... 230 6e-59 UniRef50_D1PXB9 tRNA (5-methylaminomethyl-2-thiouridylate)-methy... 230 6e-59 UniRef50_C1EG18 Predicted protein (Fragment) n=2 Tax=Micromonas ... 230 8e-59 UniRef50_B4D711 tRNA (5-methylaminomethyl-2-thiouridylate)-methy... 229 1e-58 UniRef50_A6LIF1 tRNA-specific 2-thiouridylase mnmA n=28 Tax=Bact... 229 1e-58 UniRef50_B8FEQ6 tRNA (5-methylaminomethyl-2-thiouridylate)-methy... 229 2e-58 UniRef50_Q2LWA6 tRNA-specific 2-thiouridylase mnmA 1 n=1 Tax=Syn... 228 3e-58 UniRef50_A6KZV1 tRNA-specific 2-thiouridylase mnmA 3 n=23 Tax=Ba... 226 8e-58 UniRef50_C0QRH5 tRNA-specific 2-thiouridylase mnmA n=8 Tax=Aquif... 224 5e-57 UniRef50_Q3Z8D8 tRNA-specific 2-thiouridylase mnmA n=5 Tax=Dehal... 223 6e-57 UniRef50_B1GZY9 tRNA-specific 2-thiouridylase mnmA n=2 Tax=Elusi... 222 1e-56 UniRef50_A0LEL7 tRNA-specific 2-thiouridylase mnmA n=1 Tax=Syntr... 222 2e-56 UniRef50_A6KZ28 tRNA-specific 2-thiouridylase mnmA 2 n=10 Tax=Ba... 222 2e-56 UniRef50_D2MI59 tRNA (5-methylaminomethyl-2-thiouridylate)-methy... 220 8e-56 UniRef50_C4QX90 tRNA-specific 2-thiouridylase, responsible for 2... 219 1e-55 UniRef50_Q54I63 Mitochondrial tRNA-specific 2-thiouridylase 1 n=... 219 1e-55 UniRef50_Q12093 Mitochondrial tRNA-specific 2-thiouridylase 1 n=... 218 2e-55 UniRef50_D2QHY9 tRNA(5-methylaminomethyl-2-thiouridylate)-methyl... 218 2e-55 UniRef50_Q2LVR6 tRNA-specific 2-thiouridylase mnmA 2 n=1 Tax=Syn... 218 2e-55 UniRef50_C4QP81 tRNA(5-methylaminomethyl-2-thiouridylate)-methy ... 218 2e-55 UniRef50_A6Q239 tRNA-specific 2-thiouridylase mnmA n=2 Tax=Epsil... 218 3e-55 UniRef50_D1N0N9 tRNA (5-methylaminomethyl-2-thiouridylate)-methy... 217 5e-55 UniRef50_C1ZEX9 tRNA (5-methylaminomethyl-2-thiouridylate)-methy... 217 6e-55 UniRef50_B9L801 tRNA (5-methylaminomethyl-2-thiouridylate)-methy... 217 7e-55 UniRef50_B2IBH3 tRNA-specific 2-thiouridylase mnmA n=141 Tax=roo... 216 8e-55 UniRef50_Q6MLR7 tRNA-specific 2-thiouridylase mnmA n=1 Tax=Bdell... 216 1e-54 UniRef50_B3JKC8 Putative uncharacterized protein n=2 Tax=Bactero... 215 2e-54 UniRef50_C5CIB3 tRNA (5-methylaminomethyl-2-thiouridylate)-methy... 214 3e-54 UniRef50_C9M7Q8 tRNA (5-methylaminomethyl-2-thiouridylate)-methy... 214 5e-54 UniRef50_A9BIS3 tRNA-specific 2-thiouridylase mnmA n=1 Tax=Petro... 213 1e-53 UniRef50_A7HCV7 tRNA-specific 2-thiouridylase mnmA n=1 Tax=Anaer... 211 3e-53 UniRef50_C7NES3 tRNA(5-methylaminomethyl-2-thiouridylate)-methyl... 211 3e-53 UniRef50_A9A0S9 tRNA-specific 2-thiouridylase mnmA n=1 Tax=Desul... 211 3e-53 UniRef50_Q0ARV1 tRNA-specific 2-thiouridylase mnmA n=67 Tax=Alph... 211 4e-53 UniRef50_A8SJM7 Putative uncharacterized protein n=1 Tax=Parvimo... 210 7e-53 UniRef50_Q5K850 tRNA (5-methylaminomethyl-2-thiouridylate)-methy... 209 1e-52 UniRef50_Q6AIZ6 tRNA-specific 2-thiouridylase mnmA n=1 Tax=Desul... 208 2e-52 UniRef50_A9V8Y1 Predicted protein n=1 Tax=Monosiga brevicollis R... 207 4e-52 UniRef50_A5E201 Putative uncharacterized protein n=1 Tax=Loddero... 207 7e-52 UniRef50_A5IJQ4 tRNA-specific 2-thiouridylase mnmA n=7 Tax=Therm... 206 9e-52 UniRef50_B8LDI7 Predicted protein (Fragment) n=1 Tax=Thalassiosi... 206 1e-51 UniRef50_C4F7E5 Putative uncharacterized protein n=2 Tax=Collins... 204 4e-51 UniRef50_C0A9P4 tRNA (5-methylaminomethyl-2-thiouridylate)-methy... 204 5e-51 UniRef50_A9EXM5 tRNA-specific 2-thiouridylase mnmA n=4 Tax=Myxoc... 204 5e-51 UniRef50_C9RQ01 tRNA (5-methylaminomethyl-2-thiouridylate)-methy... 203 7e-51 UniRef50_B2RHP0 tRNA-specific 2-thiouridylase mnmA n=5 Tax=Bacte... 203 7e-51 UniRef50_Q8A2F1 tRNA-specific 2-thiouridylase mnmA 2 n=8 Tax=Bac... 203 8e-51 UniRef50_A8F5H8 tRNA-specific 2-thiouridylase mnmA n=3 Tax=Therm... 202 1e-50 UniRef50_C1FJ72 Predicted protein n=1 Tax=Micromonas sp. RCC299 ... 202 1e-50 UniRef50_B0VEY5 tRNA (5-methylaminomethyl-2-thiouridylate)-methy... 202 2e-50 UniRef50_A8ES35 tRNA-specific 2-thiouridylase mnmA 1 n=5 Tax=Eps... 201 3e-50 UniRef50_Q9ZJQ0 tRNA-specific 2-thiouridylase mnmA n=22 Tax=Camp... 201 3e-50 UniRef50_B1I677 tRNA-specific 2-thiouridylase mnmA n=1 Tax=Candi... 201 3e-50 UniRef50_A7ANM3 tRNA methyl transferase family protein n=1 Tax=B... 200 7e-50 UniRef50_D1PL47 tRNA (5-methylaminomethyl-2-thiouridylate)-methy... 199 1e-49 UniRef50_C5DEF9 KLTH0C08844p n=2 Tax=Saccharomycetaceae RepID=C5... 199 2e-49 UniRef50_B9L0K7 tRNA methyl transferase n=2 Tax=Thermomicrobia (... 199 2e-49 UniRef50_C9RAV2 tRNA (5-methylaminomethyl-2-thiouridylate)-methy... 198 2e-49 UniRef50_D2L5P8 tRNA (5-methylaminomethyl-2-thiouridylate)-methy... 197 7e-49 UniRef50_B7G4M7 Predicted protein (Fragment) n=1 Tax=Phaeodactyl... 196 1e-48 UniRef50_Q5LIS5 tRNA-specific 2-thiouridylase mnmA 1 n=5 Tax=Bac... 196 2e-48 UniRef50_Q1AWB1 tRNA-specific 2-thiouridylase mnmA n=1 Tax=Rubro... 194 3e-48 UniRef50_B1VFZ9 tRNA-specific 2-thiouridylase mnmA n=65 Tax=Bact... 194 4e-48 UniRef50_Q8R5Z5 tRNA-specific 2-thiouridylase mnmA 2 n=12 Tax=Fu... 193 7e-48 UniRef50_A5FZD5 tRNA-specific 2-thiouridylase mnmA n=2 Tax=Prote... 191 4e-47 UniRef50_A6NQI9 Putative uncharacterized protein n=1 Tax=Bactero... 190 6e-47 UniRef50_UPI0001C3185B tRNA(5-methylaminomethyl-2-thiouridylate)... 190 7e-47 UniRef50_Q4UE41 Trna methyl transferase, putative n=2 Tax=Theile... 189 1e-46 UniRef50_D1BVV4 tRNA(5-methylaminomethyl-2-thiouridylate)-methyl... 189 1e-46 UniRef50_B7AL92 Putative uncharacterized protein n=3 Tax=Bactero... 189 2e-46 UniRef50_C6BSG5 tRNA (5-methylaminomethyl-2-thiouridylate)-methy... 189 2e-46 UniRef50_C7GYK6 tRNA (5-methylaminomethyl-2-thiouridylate)-methy... 189 2e-46 UniRef50_Q7U320 tRNA-specific 2-thiouridylase mnmA n=3 Tax=Helic... 189 2e-46 UniRef50_C9L0F1 tRNA (5-methylaminomethyl-2-thiouridylate)-methy... 188 3e-46 UniRef50_C1TMD1 Predicted tRNA(5-methylaminomethyl-2-thiouridyla... 187 4e-46 UniRef50_B5Y9X9 tRNA (5-methylaminomethyl-2-thiouridylate)-methy... 187 7e-46 UniRef50_C0QYI3 tRNA (5-methylaminomethyl-2-thiouridylate)-methy... 186 1e-45 UniRef50_C7LUQ7 tRNA(5-methylaminomethyl-2-thiouridylate)-methyl... 185 2e-45 UniRef50_B1VZW7 tRNA-specific 2-thiouridylase mnmA n=44 Tax=Acti... 183 7e-45 UniRef50_UPI0001BC5A6B tRNA (5-methylaminomethyl-2-thiouridylate... 183 7e-45 UniRef50_B6JVF0 tRNA (5-methylaminomethyl-2-thiouridylate)-methy... 179 2e-43 UniRef50_A7I2L9 tRNA-specific 2-thiouridylase mnmA n=19 Tax=Camp... 178 2e-43 UniRef50_C7LK58 tRNA (5-methylaminomethyl-2-thiouridylate)-methy... 177 7e-43 UniRef50_D1Y320 tRNA methyl transferase n=1 Tax=Pyramidobacter p... 176 1e-42 UniRef50_Q313S6 tRNA-specific 2-thiouridylase mnmA n=7 Tax=Desul... 176 2e-42 UniRef50_D2NS67 Predicted tRNA methyltransferase n=4 Tax=Actinom... 174 3e-42 UniRef50_A8NDW7 Putative uncharacterized protein n=1 Tax=Coprino... 174 5e-42 UniRef50_A7ZEK1 tRNA-specific 2-thiouridylase mnmA n=4 Tax=Campy... 174 7e-42 UniRef50_B2GL48 tRNA-specific 2-thiouridylase mnmA n=6 Tax=Micro... 171 3e-41 UniRef50_Q1MRW7 tRNA-specific 2-thiouridylase mnmA n=1 Tax=Lawso... 171 3e-41 UniRef50_D1B719 tRNA(5-methylaminomethyl-2-thiouridylate)-methyl... 169 1e-40 UniRef50_C7QYX8 tRNA (5-methylaminomethyl-2-thiouridylate)-methy... 169 1e-40 UniRef50_C0GTF7 tRNA (5-methylaminomethyl-2-thiouridylate)-methy... 168 2e-40 UniRef50_C2BUX5 tRNA (5-methylaminomethyl-2-thiouridylate)-methy... 166 1e-39 UniRef50_B6WY81 Putative uncharacterized protein n=1 Tax=Desulfo... 157 4e-37 UniRef50_C6HVS1 tRNA (5-methylaminomethyl-2-thiouridylate)-methy... 156 1e-36 UniRef50_C7M0G9 tRNA(5-methylaminomethyl-2-thiouridylate)-methyl... 149 2e-34 UniRef50_B8IYA5 tRNA (5-methylaminomethyl-2-thiouridylate)-methy... 147 6e-34 UniRef50_B6AN65 tRNA (5-methylaminomethyl-2-thiouridylate)-methy... 146 1e-33 UniRef50_B0MXW7 Putative uncharacterized protein n=1 Tax=Alistip... 144 4e-33 UniRef50_B6KA02 tRNA methyltransferase domain-containing protein... 140 6e-32 UniRef50_Q7X189 Lfe204p1 (Fragment) n=1 Tax=Leptospirillum ferro... 109 2e-22 UniRef50_Q5DCM7 SJCHGC00881 protein n=2 Tax=Schistosoma japonicu... 107 9e-22 UniRef50_C1SG68 Predicted tRNA(5-methylaminomethyl-2-thiouridyla... 105 2e-21 UniRef50_C9ZUV8 tRNA-methyl transferase, putative n=2 Tax=Trypan... 105 3e-21 UniRef50_Q4QIT1 TRNA-methyl transferase, putative n=4 Tax=Leishm... 99 2e-19 UniRef50_C1SG69 Predicted tRNA(5-methylaminomethyl-2-thiouridyla... 97 7e-19 UniRef50_A5KCE1 tRNA methyl transferase, putative n=1 Tax=Plasmo... 94 9e-18 UniRef50_Q4Y1X1 Putative uncharacterized protein (Fragment) n=1 ... 93 2e-17 UniRef50_B3L1V6 tRNA methyl transferase, putative n=1 Tax=Plasmo... 89 4e-16 UniRef50_Q8IJK4 tRNA methyltransferase, putative n=1 Tax=Plasmod... 70 1e-10 UniRef50_UPI000197A71F tRNA-specific 2-thiouridylase MnmA n=1 Ta... 70 1e-10 UniRef50_B3SFT2 Putative uncharacterized protein (Fragment) n=1 ... 63 2e-08 UniRef50_UPI0001742DF3 tRNA (5-methylaminomethyl-2-thiouridylate... 60 1e-07 UniRef50_C7H4N6 tRNA (5-methylaminomethyl-2-thiouridylate)-methy... 59 4e-07 UniRef50_C3XFA5 tRNA methyltransferase n=1 Tax=Helicobacter bili... 54 1e-05 UniRef50_C6X5B3 tRNA (5-methylaminomethyl-2-thiouridylate)-methy... 52 4e-05 UniRef50_A8AAD7 PP-loop domain protein n=1 Tax=Ignicoccus hospit... 52 5e-05 UniRef50_C9MRP4 tRNA(Ile)-lysidine synthase n=1 Tax=Prevotella v... 49 3e-04 UniRef50_A1AMX6 Thiamine biosynthesis protein n=4 Tax=Desulfurom... 48 6e-04 UniRef50_C7R8C6 tRNA(5-methylaminomethyl-2-thiouridylate)-methyl... 48 6e-04 UniRef50_B2TJM2 Argininosuccinate synthase n=30 Tax=Bacteria Rep... 48 6e-04 UniRef50_B5YF97 tRNA methyl transferase n=1 Tax=Dictyoglomus the... 47 8e-04 UniRef50_Q8PZP6 NH(3)-dependent NAD(+) synthetase n=3 Tax=Methan... 47 9e-04 UniRef50_Q12V31 NH(3)-dependent NAD(+) synthetase n=1 Tax=Methan... 47 0.001 UniRef50_B9LAC4 Thiamine biosynthesis protein:ExsB n=2 Tax=Nauti... 47 0.001 UniRef50_Q8SW15 Putative uncharacterized protein ECU03_1240 n=2 ... 45 0.005 UniRef50_Q09580 Probable GMP synthase [glutamine-hydrolyzing] n=... 44 0.006 UniRef50_C5VKF6 tRNA(Ile)-lysidine synthetase n=2 Tax=Prevotella... 44 0.013 UniRef50_C0GTH3 tRNA(Ile)-lysidine synthetase n=1 Tax=Desulfonat... 43 0.023 UniRef50_Q58873 CTU1/ATPBD3 family protein MJ1478 n=14 Tax=Eurya... 42 0.026 UniRef50_A9A2U4 tRNA (5-methylaminomethyl-2-thiouridylate)-methy... 42 0.030 UniRef50_A6T0B2 LPS biosynthesis protein WbpG n=4 Tax=Bacteria R... 42 0.037 UniRef50_A4YGU2 PP-loop domain protein n=3 Tax=Sulfolobaceae Rep... 42 0.042 UniRef50_B3T5L4 Putative uncharacterized protein n=2 Tax=environ... 41 0.054 UniRef50_A5G9E7 Thiamine biosynthesis protein n=4 Tax=Bacteria R... 41 0.066 UniRef50_Q1MRB2 Predicted ATPase of the PP-loop superfamily impl... 41 0.084 >UniRef50_A1STI9 tRNA-specific 2-thiouridylase mnmA n=4 Tax=Proteobacteria RepID=MNMA_PSYIN Length = 367 Score = 580 bits (1495), Expect = e-164, Method: Compositional matrix adjust. Identities = 277/358 (77%), Positives = 305/358 (85%) Query: 7 KVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYCTAAADLADAQAVCDKLG 66 KVIVGMSGGVDSSVSA+LLQQQGY VEGLFMKNWEEDD ++YC AA DL DAQ+VCDKLG Sbjct: 8 KVIVGMSGGVDSSVSAYLLQQQGYLVEGLFMKNWEEDDTDQYCAAAQDLEDAQSVCDKLG 67 Query: 67 IELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGADYIAT 126 I LHT+NFAAEYWDNVFE FLAEYKAGRTPNPDI+CNKEIKFKAFLEFAAEDLGADYIAT Sbjct: 68 IPLHTINFAAEYWDNVFEHFLAEYKAGRTPNPDIMCNKEIKFKAFLEFAAEDLGADYIAT 127 Query: 127 GHYVRRADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQVRKIAEDLG 186 GHYVRR +VDG +LLRGLD+NKDQSYFLY + +QIA+SLFPVGELEKP+VR+IAE Sbjct: 128 GHYVRRREVDGHVQLLRGLDNNKDQSYFLYAIGEKQIAKSLFPVGELEKPEVRRIAEQQD 187 Query: 187 LVTAKKKDSTGICFIGERKFREFLGRYLPAQPGKIITVDGDEIGEHQGLMYHTLGQRKGL 246 L+T KKDSTGICFIGERKF +FL YLPAQPG I+T G+ IG+HQGLMYHTLGQRKGL Sbjct: 188 LITHNKKDSTGICFIGERKFTDFLQEYLPAQPGDIVTPTGEVIGQHQGLMYHTLGQRKGL 247 Query: 247 GIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLHWVDREPFTGTMRC 306 GIGG + E PWYVV KD++NN L+VAQG +HP L S GLIA+Q WVDR P T RC Sbjct: 248 GIGGLQNSNENPWYVVGKDMDNNRLLVAQGADHPALFSYGLIAKQCDWVDRTPKKSTFRC 307 Query: 307 TVKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTPGQSAVFYNGEVCLGGGIIEQRL 364 TVKTRYRQ DIPCTV LDDD ++VIFD AAVTPGQSAVFYN EVCLGG IIE+ L Sbjct: 308 TVKTRYRQQDIPCTVTPLDDDTLKVIFDTAQAAVTPGQSAVFYNDEVCLGGAIIEEHL 365 >UniRef50_D0X1F3 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase n=1 Tax=Vibrio alginolyticus 40B RepID=D0X1F3_VIBAL Length = 430 Score = 578 bits (1490), Expect = e-163, Method: Compositional matrix adjust. Identities = 282/369 (76%), Positives = 316/369 (85%), Gaps = 5/369 (1%) Query: 1 MSETA-KKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYCTAAADLADAQ 59 MS+ + KKVIVGMSGGVDSSVSA+LL+QQGYQVEGLFMKNWEEDD EEYCTAA DLADAQ Sbjct: 57 MSDNSQKKVIVGMSGGVDSSVSAYLLKQQGYQVEGLFMKNWEEDDNEEYCTAAEDLADAQ 116 Query: 60 AVCDKLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDL 119 AVCDKLGI LHT+NFAAEYWDNVFE FLAEYKAGRTPNPDILCNKEIKFKAFLEFA E L Sbjct: 117 AVCDKLGIHLHTINFAAEYWDNVFEYFLAEYKAGRTPNPDILCNKEIKFKAFLEFADEVL 176 Query: 120 GADYIATGHYVRRADVDG--KSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQ 177 ADYIA GHYVRR+ + K ++LRGLD NKDQSYFLYTLS+EQIA+SLFPVG+LEKP+ Sbjct: 177 DADYIAMGHYVRRSFPENGEKPQMLRGLDGNKDQSYFLYTLSNEQIARSLFPVGDLEKPE 236 Query: 178 VRKIAEDLGLVTAKKKDSTGICFIGERKFREFLGRYLPAQPGKIITVDGDEIGEHQGLMY 237 VR+IAE+ L+TAKKKDSTGICFIGERKF EFLGRYLPAQPG I T +G+ IG+HQGLMY Sbjct: 237 VRRIAEEQDLITAKKKDSTGICFIGERKFTEFLGRYLPAQPGNIETPEGEVIGQHQGLMY 296 Query: 238 HTLGQRKGLGI--GGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLHWV 295 HTLGQRKGL I G E+PW+V +KD+E N+L+ QG +HP L S GL+A QLHWV Sbjct: 297 HTLGQRKGLHIGGRKGGGGNEDPWFVGEKDLERNVLIAVQGKDHPMLKSEGLLASQLHWV 356 Query: 296 DREPFTGTMRCTVKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTPGQSAVFYNGEVCL 355 DREP M+CTVKTRYRQ DIPCT+ +DD+ I+VIFDEP AVTPGQSAVFY G+VCL Sbjct: 357 DREPIRDVMKCTVKTRYRQEDIPCTIIPIDDENIKVIFDEPQIAVTPGQSAVFYKGDVCL 416 Query: 356 GGGIIEQRL 364 GGGIIEQR+ Sbjct: 417 GGGIIEQRI 425 >UniRef50_A6W0E1 tRNA-specific 2-thiouridylase mnmA n=20 Tax=Bacteria RepID=MNMA_MARMS Length = 390 Score = 513 bits (1320), Expect = e-144, Method: Compositional matrix adjust. Identities = 245/355 (69%), Positives = 287/355 (80%), Gaps = 1/355 (0%) Query: 6 KKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYCTAAADLADAQAVCDKL 65 KKVIVGMSGGVDSSVSA +L QQGYQVEGLFMKNW+EDDG EYCTA DLADAQAV DKL Sbjct: 31 KKVIVGMSGGVDSSVSALILMQQGYQVEGLFMKNWDEDDGTEYCTAKDDLADAQAVSDKL 90 Query: 66 GIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGADYIA 125 GI+LHT NFA+EYWDNVFE FLAEYKAGRTPNPDILCNKEIKFKAFLE+A L ADYIA Sbjct: 91 GIKLHTANFASEYWDNVFEHFLAEYKAGRTPNPDILCNKEIKFKAFLEYAMA-LNADYIA 149 Query: 126 TGHYVRRADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQVRKIAEDL 185 TGHYVRR + +G+ LL+GLD NKDQSYFLY + ++IA++LFPVGELEK +VR++AE+ Sbjct: 150 TGHYVRRGEKNGEPLLLKGLDGNKDQSYFLYAVGKDEIAKTLFPVGELEKTEVRRLAEEF 209 Query: 186 GLVTAKKKDSTGICFIGERKFREFLGRYLPAQPGKIITVDGDEIGEHQGLMYHTLGQRKG 245 GL+T KKDSTGICFIGER+F++FL +YLPAQPG I T++GD+I H GLMYHT+GQR+G Sbjct: 210 GLITHNKKDSTGICFIGERRFKDFLEQYLPAQPGDIETLEGDKIARHHGLMYHTIGQRQG 269 Query: 246 LGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLHWVDREPFTGTMR 305 LGIGG + +++PWYVV+KD+E N+L+V QG +H L LIA WV RE T + Sbjct: 270 LGIGGLAKYSDDPWYVVEKDLERNVLIVTQGGQHESLFKTHLIADNFDWVAREKPTFPLT 329 Query: 306 CTVKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTPGQSAVFYNGEVCLGGGII 360 C K RYRQ+D CT+ L D R+EV F EP AVTPGQS VFY +VCLGGGII Sbjct: 330 CKAKCRYRQSDQECTINELADGRVEVSFVEPQRAVTPGQSVVFYVDDVCLGGGII 384 >UniRef50_Q4FSB4 tRNA-specific 2-thiouridylase mnmA n=635 Tax=Bacteria RepID=MNMA_PSYA2 Length = 408 Score = 479 bits (1233), Expect = e-134, Method: Compositional matrix adjust. Identities = 248/370 (67%), Positives = 291/370 (78%), Gaps = 14/370 (3%) Query: 4 TAKKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYCTAAADLADAQAVCD 63 + K VIVGMSGGVDSSVSA LLQQ G+ VEGLFMKNWEEDDG EYCTA DLADAQAVCD Sbjct: 31 STKHVIVGMSGGVDSSVSAVLLQQAGFVVEGLFMKNWEEDDGTEYCTAMDDLADAQAVCD 90 Query: 64 KLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGADY 123 K+GI+LHT NFA EYWD VFE FLAEYKAGRTPNPDILCNKEIKFKAFL++A LGADY Sbjct: 91 KIGIKLHTANFAMEYWDRVFEHFLAEYKAGRTPNPDILCNKEIKFKAFLDYALT-LGADY 149 Query: 124 IATGHYVRRA----DVDG--KSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQ 177 IATGHY RR+ + DG ++LLRGLD+NKDQSYFL+ + +++A++LFPVGELEKP Sbjct: 150 IATGHYTRRSVNYKNNDGIEVAQLLRGLDNNKDQSYFLHAVGGDKLAKTLFPVGELEKPV 209 Query: 178 VRKIAEDLGLVTAKKKDSTGICFIGERKFREFLGRYLPAQPGKIITVDGDEIGEHQGLMY 237 VR+IAE+ L+TA KKDSTGICFIGER+F++FL +YLPAQ G I+T DG IG H GLMY Sbjct: 210 VRQIAEEHDLITANKKDSTGICFIGERRFKDFLQQYLPAQKGDIVTDDGINIGTHDGLMY 269 Query: 238 HTLGQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLHWVDR 297 +TLGQR G+GIGG K+ EEPW+V+ KD++NN L+V QGHEHP ++S L A +L W D Sbjct: 270 YTLGQRGGIGIGGVKDRPEEPWFVLAKDLDNNRLIVGQGHEHPMMLSNELHAYKLDWTDG 329 Query: 298 EPFTGT-----MRCTVKTRYRQTDIPCTVKALDDD--RIEVIFDEPVAAVTPGQSAVFYN 350 P T +RC K+RYRQ D C V A++ D + VIFDEP AVTPGQSAVFY Sbjct: 330 LPPTDIFSLEGLRCMAKSRYRQPDQACRVFAVNADGSEVRVIFDEPQRAVTPGQSAVFYI 389 Query: 351 GEVCLGGGII 360 EVCLGGG+I Sbjct: 390 EEVCLGGGVI 399 >UniRef50_B1YTE9 tRNA-specific 2-thiouridylase mnmA n=310 Tax=cellular organisms RepID=MNMA_BURA4 Length = 389 Score = 432 bits (1110), Expect = e-119, Method: Compositional matrix adjust. Identities = 208/363 (57%), Positives = 262/363 (72%), Gaps = 6/363 (1%) Query: 4 TAKKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYCTAAADLADAQAVCD 63 T ++V+VGMSGGVDSSV+AWLL++QGY V GLFMKNWE+DD EYC+ D D +V D Sbjct: 2 TKRRVVVGMSGGVDSSVTAWLLKEQGYDVVGLFMKNWEDDDDGEYCSTRQDWIDVVSVAD 61 Query: 64 KLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGADY 123 +GI++ VNFAAEY D VF FL EY AGRTPNPD+LCN EIKFKAFL+ A L A+ Sbjct: 62 LIGIDVEAVNFAAEYKDRVFAEFLREYSAGRTPNPDVLCNAEIKFKAFLDHAMS-LDAEM 120 Query: 124 IATGHYVRRADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQVRKIAE 183 IATGHY R + DG+ LL+ D KDQSYFL+ L+ Q+++++FP+GE+ K +VR+IA Sbjct: 121 IATGHYARVRERDGRFELLKAFDHTKDQSYFLHRLNQAQLSKTMFPLGEIPKTKVREIAA 180 Query: 184 DLGLVTAKKKDSTGICFIGERKFREFLGRYLPAQPGKIITVDGDEIGEHQGLMYHTLGQR 243 +GL AKKKDSTGICFIGER FR+FL RYLP +PG + T DG IGEH GL ++T GQR Sbjct: 181 QIGLPNAKKKDSTGICFIGERPFRDFLNRYLPTKPGPMKTPDGKVIGEHIGLAFYTFGQR 240 Query: 244 KGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLHWVDREPFTGT 303 KG+G+GG+K+G+ EPW+V KD+ +N L V QGH+HP L+S L+A + WV EP Sbjct: 241 KGIGLGGSKDGSGEPWFVAAKDIASNTLYVVQGHDHPWLLSRQLVAGNVSWVAGEPPADG 300 Query: 304 MRCTVKTRYRQTDIPCT-----VKALDDDRIEVIFDEPVAAVTPGQSAVFYNGEVCLGGG 358 C KTRYRQ D C+ + D +R + FD+ AVTPGQSAV Y+GE+CLGGG Sbjct: 301 FSCGAKTRYRQADAACSFGRPALGRADGERFSLTFDDAQWAVTPGQSAVLYDGEICLGGG 360 Query: 359 IIE 361 IIE Sbjct: 361 IIE 363 >UniRef50_D1SR18 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase n=1 Tax=Acidovorax avenae subsp. avenae ATCC 19860 RepID=D1SR18_9BURK Length = 403 Score = 403 bits (1035), Expect = e-111, Method: Compositional matrix adjust. Identities = 211/390 (54%), Positives = 261/390 (66%), Gaps = 38/390 (9%) Query: 6 KKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYCTAAADLADAQAVCDKL 65 ++++VG+SGGVDS+V+A LL+QQG++V G+FMKNWE+DD EYC++ D DA AV D + Sbjct: 7 QRIVVGLSGGVDSAVTAHLLKQQGHEVVGIFMKNWEDDDDSEYCSSNVDFVDAAAVADVI 66 Query: 66 GIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGADYIA 125 GIE+ VNFAAEY D VF FL EY+AGRTPNPD+LCN EIKFKAFL+ A +GA+ IA Sbjct: 67 GIEIEHVNFAAEYKDRVFAEFLREYEAGRTPNPDVLCNAEIKFKAFLDHAMR-VGAEKIA 125 Query: 126 TGHY--VRRADVDG-------------------------KSRLLRGLDSNKDQSYFLYTL 158 TGHY VRR D + LL+GLD KDQSYFL+ L Sbjct: 126 TGHYARVRRVAADPGAMSGRHDRMESHATACDSAQDPHWRYELLKGLDPAKDQSYFLHRL 185 Query: 159 SHEQIAQSLFPVGELEKPQVRKIAEDLGLVTAKKKDSTGICFIGERKFREFLGRYLPAQP 218 + Q++++LFPVGEL K +VR+IAE++GL AKKKDSTGICFIGER FREFL RY+ P Sbjct: 186 NQAQLSRTLFPVGELRKTEVRRIAEEIGLPNAKKKDSTGICFIGERPFREFLNRYIQHAP 245 Query: 219 GKIITVDGDEIGEHQGLMYHTLGQRKGLGIGGTKE-------GTEEPWYVVDKDVENNIL 271 G I+ G ++G+H GL ++TLGQR+GLGIGG KE G PW+V K+VE N+L Sbjct: 246 GPILDDRGRKLGQHVGLSFYTLGQRQGLGIGGVKEKGAQRGGGEHAPWFVARKEVERNVL 305 Query: 272 VVAQGHEHPRLMSVGLIAQQLHWV-DREPFTGTMRCTVKTRYRQTDIPCTVKALDDDRIE 330 V QGH+HP L+S L A WV R P G C KTRYRQ D CTV + Sbjct: 306 RVVQGHDHPWLLSHTLQATDASWVAGRPPAAGA--CAAKTRYRQQDAACTVTPAEGGDFA 363 Query: 331 VIFDEPVAAVTPGQSAVFYNGEVCLGGGII 360 + F E AVTPGQSAV Y+GEVCLGGG+I Sbjct: 364 LAFPEAQWAVTPGQSAVLYDGEVCLGGGVI 393 >UniRef50_A2SLT0 tRNA-specific 2-thiouridylase mnmA n=1 Tax=Methylibium petroleiphilum PM1 RepID=MNMA_METPP Length = 396 Score = 400 bits (1029), Expect = e-110, Method: Compositional matrix adjust. Identities = 214/395 (54%), Positives = 258/395 (65%), Gaps = 38/395 (9%) Query: 1 MSETAKKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYCTAAADLADAQA 60 MS ++V+VG+SGGVDS+VSAWLL+QQG++V GLFMKNWE+DD +EYC++ D DA + Sbjct: 1 MSAKKERVVVGLSGGVDSAVSAWLLKQQGHEVVGLFMKNWEDDDDDEYCSSRQDFLDAAS 60 Query: 61 VCDKLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLG 120 V D +GIE+ VNFAAEY D VF FL EY+AGRTPNPD+LCN EIKFKAFL+ A LG Sbjct: 61 VADVIGIEIEHVNFAAEYRDRVFAEFLREYEAGRTPNPDVLCNAEIKFKAFLDHALR-LG 119 Query: 121 ADYIATGHY--VRRA-------------------------DVDGKSRLLRGLDSNKDQSY 153 A IATGHY VRRA + G+ LL+GLD++KDQSY Sbjct: 120 AGKIATGHYARVRRAPALPGMPDGPLDESSAGALDRARVREAGGRFELLKGLDASKDQSY 179 Query: 154 FLYTLSHEQIAQSLFPVGELEKPQVRKIAEDLGLVTAKKKDSTGICFIGERKFREFLGRY 213 FL+ LS Q+A++LFPVGEL K +VR+IA ++ L A KKDSTGICFIGER FREFL RY Sbjct: 180 FLHRLSQAQLARTLFPVGELPKTEVRRIAAEIRLPVAAKKDSTGICFIGERPFREFLNRY 239 Query: 214 LPAQPGKIITVDGDEIGEHQGLMYHTLGQRKGLGIGGTKE-------GTEEPWYVVDKDV 266 L PG I G +GEH GL ++TLGQRKG+GIGG KE PW+V KD Sbjct: 240 LAHAPGPIKDERGRTLGEHVGLSFYTLGQRKGIGIGGVKERGAARGGADHAPWFVARKDR 299 Query: 267 ENNILVVAQGHEHPRLMSVGLIAQQLHWV-DREPFTGTMRCTVKTRYRQTDIPCTVKALD 325 +N L V QGH+HP L S L A W+ P G + KTRYRQ D C + Sbjct: 300 PHNTLYVVQGHDHPWLQSFRLEADDASWIAGTPPAPGAL--AAKTRYRQADASCVLAPGA 357 Query: 326 DDRIEVIFDEPVAAVTPGQSAVFYNGEVCLGGGII 360 D R + F P AVTPGQSAV Y+GEVCLGGG+I Sbjct: 358 DGRFRLDFGVPQWAVTPGQSAVLYDGEVCLGGGVI 392 >UniRef50_Q6MA75 tRNA-specific 2-thiouridylase mnmA n=15 Tax=Bacteria RepID=MNMA_PARUW Length = 376 Score = 390 bits (1003), Expect = e-107, Method: Compositional matrix adjust. Identities = 200/364 (54%), Positives = 243/364 (66%), Gaps = 7/364 (1%) Query: 3 ETAKKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYCTAAADLADAQAVC 62 + K V+VGMSGGVDSSVSA L+++QGY V GLFMKNWEE D C++A D D + VC Sbjct: 2 KNQKTVVVGMSGGVDSSVSALLMKEQGYNVIGLFMKNWEEKDENGVCSSAQDYDDVRRVC 61 Query: 63 DKLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGAD 122 D + I + VNF Y VF F+A+++ G TPNPDILCN+EIKFK FLE A E LGAD Sbjct: 62 DHINIPYYAVNFVENYRKQVFTQFIADFQKGWTPNPDILCNREIKFKVFLEKALE-LGAD 120 Query: 123 YIATGHYVRRADVD-GKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQVRKI 181 ++ATGHY + +D G L++G+D NKDQ+YFLYTL+ + + Q LFPVG LEK QVR I Sbjct: 121 FLATGHYCQNLILDKGSPSLVKGIDHNKDQTYFLYTLNQQILQQVLFPVGGLEKSQVRDI 180 Query: 182 AEDLGLVTAKKKDSTGICFIGERKFREFLGRYLPAQPGKIITVDGDEIGEHQGLMYHTLG 241 A LVTA+KKDSTGICFIGER FR FL +Y+ QPG T+ G +G+H G Y+TLG Sbjct: 181 ARKHQLVTAEKKDSTGICFIGERDFRSFLSQYVAIQPGAFQTLQGKNVGKHMGTAYYTLG 240 Query: 242 QRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLHWVDREPFT 301 QRKGLGIGG E W+VV KD E I+ V QG HP L LIA L WV P Sbjct: 241 QRKGLGIGGAGEA----WFVVGKDHERGIVFVEQGANHPALYCDELIATDLSWVAEAPLL 296 Query: 302 GTMRCTVKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTPGQSAVFYNGEVCLGGGIIE 361 C K RYRQ D CT+ +++ + V FD P AVTPGQS VFY G +CLGGG+I+ Sbjct: 297 -PYTCQSKVRYRQNDQFCTIHRIENGKAFVTFDRPQRAVTPGQSIVFYVGNICLGGGVIQ 355 Query: 362 QRLP 365 Q P Sbjct: 356 QPGP 359 >UniRef50_B0U6Q7 tRNA-specific 2-thiouridylase mnmA n=7 Tax=Xylella fastidiosa RepID=MNMA_XYLFM Length = 379 Score = 390 bits (1002), Expect = e-107, Method: Compositional matrix adjust. Identities = 196/354 (55%), Positives = 232/354 (65%), Gaps = 2/354 (0%) Query: 7 KVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYCTAAADLADAQAVCDKLG 66 ++IV MSGGVDSSV+AW L Q + GLFM+NW DDG C A D DA AVC LG Sbjct: 5 RIIVAMSGGVDSSVAAWRLNSQREAIAGLFMRNWT-DDGNGQCHAEEDRRDAVAVCGILG 63 Query: 67 IELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGADYIAT 126 I H +F+ EYW VF FLAEY GRTPNPD+LCN+EIKFK FLE A E LGAD IAT Sbjct: 64 IAFHFRDFSHEYWQEVFTHFLAEYANGRTPNPDVLCNREIKFKHFLETARE-LGADRIAT 122 Query: 127 GHYVRRADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQVRKIAEDLG 186 GHY R + LLRG D +KDQSYFL+ L EQ+A +LFP+G+LEK Q+R++A G Sbjct: 123 GHYARIEHYRQRWHLLRGADRSKDQSYFLHQLGQEQLAATLFPIGDLEKQQLRQLAHQTG 182 Query: 187 LVTAKKKDSTGICFIGERKFREFLGRYLPAQPGKIITVDGDEIGEHQGLMYHTLGQRKGL 246 L T KKDSTGICFIGER FREFL +YLPAQPG+I I EH G+ Y TLGQR+GL Sbjct: 183 LPTHAKKDSTGICFIGERNFREFLKQYLPAQPGEIRDPQEQRIAEHPGVFYFTLGQRQGL 242 Query: 247 GIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLHWVDREPFTGTMRC 306 IGG + PWYV+ KD+ N+L V Q + P L S L ++ HWV P T C Sbjct: 243 NIGGVRNRPPSPWYVIGKDLATNVLYVDQHRDSPFLQSRWLRSEPAHWVSGSPPAHTFTC 302 Query: 307 TVKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTPGQSAVFYNGEVCLGGGII 360 T +TRYRQ D PC V +D ++V F AVTPGQS V Y+G CLGG +I Sbjct: 303 TAQTRYRQADEPCKVTVRNDGSLDVDFTRTQWAVTPGQSLVLYDGNECLGGAVI 356 >UniRef50_Q057R1 tRNA-specific 2-thiouridylase mnmA n=6 Tax=Enterobacteriaceae RepID=MNMA_BUCCC Length = 373 Score = 366 bits (939), Expect = e-100, Method: Compositional matrix adjust. Identities = 182/361 (50%), Positives = 243/361 (67%), Gaps = 4/361 (1%) Query: 11 GMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYCTAAADLADAQAVCDKLGIELH 70 MSGGVDSSVSAWLL +QGYQVEGLFMKNW+EDD +YC++ D D + VC L I LH Sbjct: 13 AMSGGVDSSVSAWLLLKQGYQVEGLFMKNWDEDDSNDYCSSKIDFNDVKKVCKTLNIPLH 72 Query: 71 TVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGADYIATGHYV 130 T+NF+ EYW+NVF FL E+K G TPNPDILCNK IKF L+F+ + L +DY ATGHY Sbjct: 73 TINFSEEYWENVFLNFLKEHKKGNTPNPDILCNKIIKFNICLKFSLKYLKSDYFATGHYA 132 Query: 131 RRADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQVRKIAEDLGLVTA 190 + L R D KDQSYFLYTL + +++ +FP+ +K ++RKIA+ + L Sbjct: 133 KIKKTKKNFYLYRAHDKKKDQSYFLYTLKSKILSKIIFPLAYFKKKKIRKIAKKIKLSVY 192 Query: 191 KKKDSTGICFIGERKFREFLGRYLPAQPGKIITVDGDEIGEHQGLMYHTLGQRKGLGIGG 250 KKKDSTGICFI +KF FL +Y+P + GKI+T+ + +G H G ++T+GQRKGL IGG Sbjct: 193 KKKDSTGICFIQPKKFNSFLKQYIPQKIGKILTMSKEFLGLHLGYEFYTIGQRKGLNIGG 252 Query: 251 TKEGTEE-PWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLHWVDREPFTGTMRCTVK 309 K+ PWYVV KD+ NI+ V QG +P L+S G + +++H+++ F +C V+ Sbjct: 253 KKKKKNAYPWYVVKKDIYLNIIFVVQGLRNPYLLSYGFLTKKIHYINDNIFYFKKKCVVQ 312 Query: 310 TRYRQTDIPCTVKALD--DDRIEVIFDEPVAAVTPGQSAVFYNGEVCLGGGIIEQRLP-L 366 +YRQ I C + ++ I+VIF +P+ VTPGQSAVFY CLGG II++ +P L Sbjct: 313 IKYRQEPIICEFFKISKKNNYIKVIFKKPILYVTPGQSAVFYLKNKCLGGSIIKKNIPYL 372 Query: 367 P 367 P Sbjct: 373 P 373 >UniRef50_B5ZBP8 tRNA-specific 2-thiouridylase mnmA n=43 Tax=Bacteria RepID=MNMA_UREU1 Length = 380 Score = 351 bits (901), Expect = 2e-95, Method: Compositional matrix adjust. Identities = 177/373 (47%), Positives = 240/373 (64%), Gaps = 19/373 (5%) Query: 3 ETAKKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNW----------EEDDGEEYCTAA 52 T K+V++G+SGGVDSSVSA LL+QQGY+V GLFM NW E D + C + Sbjct: 4 NTKKRVVIGLSGGVDSSVSALLLKQQGYEVIGLFMANWDTVANFENNRESDKKHQGCESE 63 Query: 53 ADLADAQAVCDKLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFL 112 D DAQAV K+GI L+ V F EYW+NVFE FL+EY+ RTPNPDILCN+ IKF +FL Sbjct: 64 LDYQDAQAVAQKIGIPLYRVEFIKEYWNNVFEYFLSEYQKNRTPNPDILCNQFIKFDSFL 123 Query: 113 EFAAEDLGADYIATGHYVRRADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGE 172 +A +L ADYIA GHY + + S LL+ D NKDQ+YFL L Q+ +LFP+G+ Sbjct: 124 NYAKNELKADYIAMGHYAKVKHTNNLSYLLKATDVNKDQTYFLCNLKQTQLQNALFPIGD 183 Query: 173 LEKPQVRKIAEDLGLVTAKKKDSTGICFIGERKFREFLGRYLPAQPGKIITVDGDEI-GE 231 L K QVR IA++ GLVTA KKDSTGICFIGER F+ FL Y+P QPG+I+ + ++I G Sbjct: 184 LTKQQVRTIAKEYGLVTANKKDSTGICFIGERNFKYFLENYIPNQPGEIVNIVNNQIVGH 243 Query: 232 HQGLMYHTLGQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQ-GHEHPRLMSVGLIAQ 290 H G MY+T+GQRKGL +G G E +V +KD+ I+ V+ E L+S + + Sbjct: 244 HMGTMYYTIGQRKGLNLG----GMNERMFVCEKDINKKIIYVSPLSLEDQYLISNQALVE 299 Query: 291 QLHWVDREPFTGTMRCTVKTRYRQTDIPCTVKALDDDRIEVIFD-EPVAAVTPGQSAVFY 349 ++++ EP+ + +V+ R+RQ + ++ V+ + EP A+TPGQ AVFY Sbjct: 300 NMNFI--EPYNPQIPISVRFRHRQNLVVVNSFLCIENTNNVLINYEPAKAITPGQYAVFY 357 Query: 350 NGEVCLGGGIIEQ 362 + C+GGG+I Q Sbjct: 358 QNDHCIGGGVIAQ 370 >UniRef50_A1WWV9 tRNA-specific 2-thiouridylase mnmA n=2 Tax=Bacteria RepID=MNMA_HALHL Length = 383 Score = 342 bits (876), Expect = 2e-92, Method: Compositional matrix adjust. Identities = 178/367 (48%), Positives = 227/367 (61%), Gaps = 3/367 (0%) Query: 1 MSETAKKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYCTAAADLADAQA 60 M+E+ K+++VG+SGGVDS+V+A L + G++V GLFMKNWE+DD C+A D+A A A Sbjct: 1 MTESPKRIVVGLSGGVDSAVAALRLVRAGHEVIGLFMKNWEDDDTLTQCSAEDDIAAAVA 60 Query: 61 VCDKLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLG 120 V + LGI + VNFAA Y VFE L E +AGRTPNPDILCN+ +KF FL A E Sbjct: 61 VAEHLGIPIRRVNFAAHYRREVFEHALQELRAGRTPNPDILCNRHVKFDRFLRHAREQFE 120 Query: 121 ADYIATGHYVRRADV-DGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQVR 179 AD +ATGHY R DG+ LLRG+D +KDQSYFL + + + FP+G+ K VR Sbjct: 121 ADAVATGHYARTGRAGDGEPALLRGIDPSKDQSYFLAGVPRQALDAVRFPLGDSTKETVR 180 Query: 180 KIAEDLGLVTAKKKDSTGICFIGERKFREFLGRYLPAQPGKIITVDGDEIGEHQGLMYHT 239 A L + DSTGICFIGER F +F+ RY+ PG I+T DG EIG H GL ++T Sbjct: 181 AEARSAALPNFDRPDSTGICFIGERDFTQFMQRYIDPHPGPILTEDGREIGRHCGLAFYT 240 Query: 240 LGQRKGLGIGGTK-EGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLHWVDRE 298 LGQR+GLGIGG + + PWYV KD N L V QGH+HP L S + + HW+ Sbjct: 241 LGQRRGLGIGGDRNRDSSAPWYVAGKDARRNALFVVQGHDHPWLQSAAVSTEPFHWLAPV 300 Query: 299 PFTGTMRCTVKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTPGQSAVFYNGEVCLGGG 358 P G R + RYRQ + + R+ FDEP A TPGQ V Y+ E CLGGG Sbjct: 301 PAEGA-RLHAQVRYRQEPQAGQLSHAEGGRVVFRFDEPQRAATPGQHLVLYDREQCLGGG 359 Query: 359 IIEQRLP 365 +I+ P Sbjct: 360 VIDTAHP 366 >UniRef50_Q253W3 tRNA-specific 2-thiouridylase mnmA n=3 Tax=Chlamydophila RepID=MNMA_CHLFF Length = 361 Score = 339 bits (870), Expect = 9e-92, Method: Compositional matrix adjust. Identities = 172/358 (48%), Positives = 229/358 (63%), Gaps = 9/358 (2%) Query: 6 KKVIVGMSGGVDSSVSAWLLQQ-QGYQVEGLFMKNWEEDDGEEYCTAAADLADAQAVCDK 64 K V+V MSGGVDSSV A+LL+ Y+V GLFMKNWEE+DGE C+ A D D + V + Sbjct: 3 KTVVVAMSGGVDSSVVAYLLKNYTSYKVLGLFMKNWEEEDGEGLCSTAKDYEDVEKVAGQ 62 Query: 65 LGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGADYI 124 L I +TV+FA EY + VF FL Y G TPNPD+LCN+EIKF L+ +LG D++ Sbjct: 63 LDIPYYTVSFAKEYRERVFSRFLTGYSEGYTPNPDVLCNREIKFD-LLQKKVRELGGDFL 121 Query: 125 ATGHYVRRADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQVRKIAED 184 ATGHY R + + LLRG+D KDQSYFL E + +FP+G+ K +VR IA Sbjct: 122 ATGHYCRVSPDENGVNLLRGIDPQKDQSYFLCGTRKESLENVIFPLGDKTKTEVRSIAAQ 181 Query: 185 LGLVTAKKKDSTGICFIGERKFREFLGRYLPAQPGKIITVDGDE-IGEHQGLMYHTLGQR 243 GL TA+K+DSTGICFIG+R F+ FL +++P G I+ D +G H+G Y+T+GQR Sbjct: 182 AGLATAQKRDSTGICFIGKRPFKSFLEKFVPNLEGNIVDYDSQRVVGHHEGAHYYTIGQR 241 Query: 244 KGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLHWVDREPFTGT 303 +GL +G G+E+P YVV KD+E NI+ + +G +HP L L A++L+W T Sbjct: 242 RGLDLG----GSEKPCYVVGKDMEKNIVYIVRGEDHPLLYQTELTARELNWFVSPKSITT 297 Query: 304 MRCTVKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTPGQSAVFYNGEVCLGGGIIE 361 C+ K RYR D C + +D + V F PV A+TPGQ+ FY+GE CLGGG+IE Sbjct: 298 --CSAKVRYRSNDEECEILLRGEDEVLVRFASPVKAITPGQAIAFYDGERCLGGGVIE 353 >UniRef50_B1VAX7 tRNA-specific 2-thiouridylase mnmA n=4 Tax=Bacteria RepID=MNMA_PHYAS Length = 375 Score = 329 bits (843), Expect = 1e-88, Method: Compositional matrix adjust. Identities = 168/367 (45%), Positives = 229/367 (62%), Gaps = 14/367 (3%) Query: 6 KKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEY---------CTAAADLA 56 KKV+VG+SGGVDS+VSA LL++ GY+VE +FM+NW+ ++ C D Sbjct: 2 KKVVVGLSGGVDSAVSALLLKKAGYEVEAVFMRNWDSQLNFDFQGNPTLNDVCPQELDYK 61 Query: 57 DAQAVCDKLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAA 116 DA V +LGI+LH VNF EYW VF F+ +K TPNPDILCN EIKFKAF+ +A Sbjct: 62 DALKVSLQLGIKLHRVNFIEEYWQKVFLYFINAFKNNLTPNPDILCNNEIKFKAFINYAT 121 Query: 117 EDLGADYIATGHYVRRA-DVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEK 175 L YIA GHY R D + K L LD NKDQ+YFL L Q+ LFP+ +L K Sbjct: 122 SKLKPQYIAMGHYARLIYDKNQKVSLACPLDKNKDQTYFLSQLKTSQLKNILFPLADLTK 181 Query: 176 PQVRKIAEDLGLVTAKKKDSTGICFIGERKFREFLGRYLPAQPGKIITVDGDEIGEHQGL 235 +VRKIA + GL+ A KKDSTGICFIGER F +FL YLPAQ G I +DG + H+G+ Sbjct: 182 KEVRKIALENGLINACKKDSTGICFIGERNFFQFLNNYLPAQKGSIKRLDGTFLTYHKGV 241 Query: 236 MYHTLGQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLHWV 295 +++T+GQRK LG+G G +EP++VV K+++ N L V +HP L S + + W Sbjct: 242 IHYTIGQRKNLGLGNFSSG-QEPFFVVGKNLKTNTLYVEPNSQHPHLYSDRALIIDVTWR 300 Query: 296 DREPFTGTMRCTVKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTPGQSAVFYNGEVCL 355 + T + K RYRQ + T+ LD + +E+++ + + AVTPGQ FY+ ++CL Sbjct: 301 GEKTKT---QIQAKMRYRQPNQKVTLNWLDANTLEILYPQKIKAVTPGQICAFYDDDICL 357 Query: 356 GGGIIEQ 362 G G+I++ Sbjct: 358 GAGVIKE 364 >UniRef50_B1AJ41 tRNA-specific 2-thiouridylase mnmA n=13 Tax=Mollicutes RepID=MNMA_UREP2 Length = 385 Score = 326 bits (835), Expect = 9e-88, Method: Compositional matrix adjust. Identities = 175/365 (47%), Positives = 231/365 (63%), Gaps = 19/365 (5%) Query: 11 GMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEE----DDGEEY------CTAAADLADAQA 60 G+SGGVDSSVSA LL+Q+GY+V GLFM NW+ ++ E+ C + D DAQA Sbjct: 12 GLSGGVDSSVSALLLKQEGYEVIGLFMSNWDTIANFENNHEFNKTHQGCESELDYQDAQA 71 Query: 61 VCDKLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLG 120 V K+GI L+ V F EYWDNVFE FL+EY+ RTPNPDILCN+ IKF +FL +A +L Sbjct: 72 VAQKIGIPLYRVEFIKEYWDNVFEYFLSEYQKNRTPNPDILCNQFIKFDSFLNYAKNELQ 131 Query: 121 ADYIATGHYVRRADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQVRK 180 ADYIA GHY R S LL+ +D+NKDQ+YFL L+ Q+ LFP+G L K QVR Sbjct: 132 ADYIAMGHYARVKHDRNSSFLLKAIDTNKDQTYFLCNLNQNQLQNVLFPIGHLTKLQVRA 191 Query: 181 IAEDLGLVTAKKKDSTGICFIGERKFREFLGRYLPAQPG-KIITVDGDEIGEHQGLMYHT 239 IA+ GL+TA KKDSTGICFIGER F+ FL Y+P QPG I V+ IG H G MY+T Sbjct: 192 IAKKHGLITANKKDSTGICFIGERNFKTFLQNYIPNQPGQIINIVNNQIIGHHIGTMYYT 251 Query: 240 LGQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVA-QGHEHPRLMSVGLIAQQLHWVDRE 298 +GQRKGL +G G E +V DKD++ I+ VA E L+S + + ++++ E Sbjct: 252 IGQRKGLNLG----GMNERMFVCDKDIDKKIIYVAPSSFEKQYLISTQALIENINFI--E 305 Query: 299 PFTGTMRCTVKTRYRQTDIPCT-VKALDDDRIEVIFDEPVAAVTPGQSAVFYNGEVCLGG 357 P+ + V+ R+RQ I + + + +I E A+TPGQ AVFY + C+GG Sbjct: 306 PYNPQIPIMVRFRHRQDLIIVNDFLPIKNTKNVLINYESARAITPGQYAVFYQNDHCIGG 365 Query: 358 GIIEQ 362 GI+ + Sbjct: 366 GIVSK 370 >UniRef50_A9SZR3 Predicted protein n=1 Tax=Physcomitrella patens subsp. patens RepID=A9SZR3_PHYPA Length = 421 Score = 322 bits (824), Expect = 2e-86, Method: Compositional matrix adjust. Identities = 171/376 (45%), Positives = 234/376 (62%), Gaps = 27/376 (7%) Query: 1 MSETAKKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDD--GEEYCTAAADLADA 58 + E V VG+SGGVDSS++A LLQ+QGY+V G++M+NW+ D G +C+A D DA Sbjct: 33 LRERRGVVAVGISGGVDSSIAALLLQRQGYEVFGVYMRNWDARDEAGGGHCSADQDYEDA 92 Query: 59 QAVCDKL-GIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAE 117 Q VC+ L GI+LH +++ +YW VFE F ++ G TPNPD+ CN+ IKF A LE A + Sbjct: 93 QRVCEHLAGIKLHHLDYQKKYWTQVFENFTQKFAMGLTPNPDLDCNQHIKFDALLENALQ 152 Query: 118 DLGADYIATGHYVR--RADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEK 175 +GAD ATGHY R R G +LLRG+D +KDQSYFL ++ + LFP+G L K Sbjct: 153 -MGADKFATGHYARLSRPQCGGPVQLLRGIDEDKDQSYFLASVGSAAFERVLFPLGGLTK 211 Query: 176 PQVRKIAEDLGLVTAKKKDSTGICFIGERKFREFLGRYLPAQPGKIITVDGD-EIGEHQG 234 QVR +A GLVTA K+ S GICF+G RKFR+F+ Y+ +PG + VDG+ +G H G Sbjct: 212 AQVRDLALSEGLVTATKRSSAGICFVGRRKFRDFISEYVEMEPGPFVCVDGNTHLGLHTG 271 Query: 235 LMYHTLGQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLHW 294 + +T GQR G+ G +P+YVV KDV+NN++ VA G +HP L +A W Sbjct: 272 IAAYTHGQRAGI------SGVPKPFYVVGKDVQNNVVYVAMGADHPALFCTSAVAGDPFW 325 Query: 295 V---------DREPFTGTMRCTVKTRYRQTDIPCTVKALDD-DRIEVIFDEPVAAVTPGQ 344 + D +P T C K RYRQ+ CTV LD + + + F+EP A+TPGQ Sbjct: 326 ISGSPPKQLQDGQPLT----CMFKARYRQSLERCTVCFLDSKNEVAIRFEEPTRAITPGQ 381 Query: 345 SAVFYNGEVCLGGGII 360 + V Y+G+VCLG +I Sbjct: 382 ALVLYDGDVCLGASVI 397 >UniRef50_C3ZAA6 Putative uncharacterized protein n=1 Tax=Branchiostoma floridae RepID=C3ZAA6_BRAFL Length = 383 Score = 320 bits (821), Expect = 4e-86, Method: Compositional matrix adjust. Identities = 161/363 (44%), Positives = 230/363 (63%), Gaps = 14/363 (3%) Query: 4 TAKKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYCTAAADLADAQAVCD 63 + + V+V +SGGVDSSV+A LL+++GYQV G+FM+NW+ + C A D DA+ VC Sbjct: 2 SLRHVVVALSGGVDSSVAALLLKRKGYQVTGVFMRNWDTVNELGVCQADRDCEDAEYVCR 61 Query: 64 KLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGADY 123 +L I H VN +YW++VF L EY+ G TPNPDILCNK IKF+ F + + AD Sbjct: 62 RLDIPFHQVNLVKDYWNDVFSEMLKEYQHGWTPNPDILCNKRIKFRTFFNYVMDKFEADA 121 Query: 124 IATGHYVRRADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQVRKIAE 183 +ATGHY R + D K LL+ LDS KDQ++FL + + + ++LFP+GEL KP V+++A+ Sbjct: 122 LATGHYARTSIHDVK--LLQALDSWKDQTFFLSQIPQQALRRALFPLGELTKPVVKQMAQ 179 Query: 184 DLGLV-TAKKKDSTGICFIGERKFREFLGRYLPAQPGKIIT-VDGDEIGEHQGLMYHTLG 241 D G AKKK+S GICFIG R F FL YL +PG+ ++ VDG +GEH+G +T+G Sbjct: 180 DAGFTHIAKKKESMGICFIGTRNFPTFLQEYLETEPGQFVSVVDGKVLGEHKGACMYTIG 239 Query: 242 QRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLHWV---DRE 298 QR GLG G +EPW+VVD+D N + V +HP L ++ + +HW+ R+ Sbjct: 240 QRAGLG------GMKEPWFVVDRDTSTNSIFVCPTTDHPALYRQLIMTESVHWIADPPRD 293 Query: 299 PFTGTMR-CTVKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTPGQSAVFYNGEVCLGG 357 + M C + ++R + CT+ ++++ V EP+ A+TPGQ AVFY G+ CLGG Sbjct: 294 LYVDQMYDCHFRFQHRMPLVKCTLTLSGNNQVWVSLAEPIRALTPGQYAVFYKGDECLGG 353 Query: 358 GII 360 G I Sbjct: 354 GKI 356 >UniRef50_Q4A7U1 tRNA-specific 2-thiouridylase mnmA n=5 Tax=Mollicutes RepID=MNMA_MYCH7 Length = 372 Score = 306 bits (784), Expect = 7e-82, Method: Compositional matrix adjust. Identities = 161/366 (43%), Positives = 228/366 (62%), Gaps = 23/366 (6%) Query: 7 KVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEY-----------CTAAADL 55 K++VG+SGGVDS+VSA+LL++ G+ V +FM+NW+ ++ C D Sbjct: 3 KIVVGLSGGVDSAVSAYLLKKAGHNVIAVFMRNWDSSLNNDFLGKKNEKNFTICPQEQDW 62 Query: 56 ADAQAVCDKLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFA 115 DA+ V +L I + ++F EYWD VF + +Y++G TPNPDILCNK IKFK FL++A Sbjct: 63 LDAKVVAKQLNIPIFRIDFIKEYWDEVFSDLILKYQSGLTPNPDILCNKNIKFKHFLDYA 122 Query: 116 AEDLGADYIATGHYVRRADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEK 175 + AD+IA GHY + + L G DS KDQSYFL LS Q+ +++FP+G L K Sbjct: 123 QKVHNADFIAMGHYAKTDN----GNLYAGADSLKDQSYFLGQLSKSQLQKTIFPLGNLLK 178 Query: 176 PQVRKIAEDLGLVTAKKKDSTGICFIGERKFREFLGRYLPAQPGKIITVDGDEI-GEHQG 234 +VRKIA +LGL+ AKKKDSTGICFIGERKF +FL Y+PAQPG II + ++ G+H G Sbjct: 179 SEVRKIANELGLINAKKKDSTGICFIGERKFTDFLQNYIPAQPGNIIDISTKKVLGKHIG 238 Query: 235 LMYHTLGQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLHW 294 +MY T+GQRKG G+ G K EP++VV +++ IL V+ E L S L+A+ ++ Sbjct: 239 IMYFTIGQRKGFGLSGMK----EPYFVVGHNLKEKILYVSPQSEKKWLESDSLMAKNANF 294 Query: 295 VDREPFTGTMRCTVKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTPGQSAVFYN-GEV 353 + E F + K RYRQ IP ++ + D+ + + + A+TPGQ V Y+ +V Sbjct: 295 LS-ENFRNLDNLSAKFRYRQEAIPIRIEKIQDNSFWISY-QKYQAITPGQQVVIYHQNQV 352 Query: 354 CLGGGI 359 L G I Sbjct: 353 ILAGEI 358 >UniRef50_B5DNY9 GA22395 n=14 Tax=Neoptera RepID=B5DNY9_DROPS Length = 387 Score = 304 bits (778), Expect = 3e-81, Method: Compositional matrix adjust. Identities = 155/377 (41%), Positives = 234/377 (62%), Gaps = 23/377 (6%) Query: 6 KKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYCTAAADLADAQAVCDKL 65 + ++VGMSGGVDS+VSA LL+++G++V G+FM+NW+E D C+ DL DA+ C +L Sbjct: 3 RNIVVGMSGGVDSAVSAHLLRERGHRVMGVFMRNWDEHDEAGRCSGEQDLKDAEWACQRL 62 Query: 66 GIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGADYIA 125 GIEL VN+ EYW VF FL +Y+ G TPNPDILCN+ IKF F A + LG D +A Sbjct: 63 GIELRQVNYVKEYWTAVFSAFLDDYQQGLTPNPDILCNRHIKFDLFHRHALDKLGYDAVA 122 Query: 126 TGHYVR---------RADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKP 176 TGHY R RAD G++RLL D+ KDQ++FL + + + +++FP+G+L K Sbjct: 123 TGHYARNSLGNFLEHRAD-GGEARLLIPADTFKDQTFFLAGIPRQALQRTMFPLGDLAKN 181 Query: 177 QVRKIAEDLGL-VTAKKKDSTGICFIGERKFREFLGRYLPAQPGKIITVD-GDEIGEHQG 234 +V+ +A +GL A K++STGICF+G+R F+ F+ Y+ ++ G+ + +D G +G H+G Sbjct: 182 EVKLLARRIGLQRLAHKRESTGICFVGKRDFKSFIREYIASKSGQFVDIDSGAIVGSHEG 241 Query: 235 LMYHTLGQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLHW 294 + T+GQR LG +P++V K+ +N + VA GHEHP L+S + + +W Sbjct: 242 IHQWTVGQRCRLG------SFLQPYFVARKEASSNTIYVAAGHEHPALLSTCIHIEAPNW 295 Query: 295 V-----DREPFTGTMRCTVKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTPGQSAVFY 349 + R G++RC + ++ + + C +++ D EV+ D P+ A+TPGQ AVFY Sbjct: 296 LCVQSQQRLASAGSLRCRFRFQHTKPLVDCCLRSCPDGGFEVLLDIPLRAITPGQYAVFY 355 Query: 350 NGEVCLGGGIIEQRLPL 366 + CLG G I PL Sbjct: 356 DDVACLGAGRIMSAHPL 372 >UniRef50_UPI00016B2149 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase n=1 Tax=candidate division TM7 single-cell isolate TM7c RepID=UPI00016B2149 Length = 340 Score = 303 bits (777), Expect = 5e-81, Method: Compositional matrix adjust. Identities = 163/355 (45%), Positives = 224/355 (63%), Gaps = 18/355 (5%) Query: 7 KVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYCTAAADLADAQAVCDKLG 66 KV VGMSGGVDSS++A LL ++G+ V G++MKNW +D C A DLADA+ V +LG Sbjct: 2 KVFVGMSGGVDSSLTAALLIERGHNVTGVYMKNWSQDLPGMKCPWADDLADAKRVAVQLG 61 Query: 67 IELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGADYIAT 126 I+L +F EY +NV E ++ Y G TPNPDI+CN+E+KFK FLE A D GAD IAT Sbjct: 62 IDLKVYDFEKEYRENVVEYMISAYSQGYTPNPDIMCNQEVKFKLFLETALAD-GADMIAT 120 Query: 127 GHYVRRADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQVRKIAEDLG 186 GHY D +RL D+NKDQ+YFLY ++ + ++++ FP+GE K +VR+++ED Sbjct: 121 GHYATTRD----NRLFMASDANKDQTYFLYRVTSQALSKTFFPLGEYTKQKVRQMSEDRH 176 Query: 187 LVTAKKKDSTGICFIGERKFREFLGRYLPAQPGKII-TVDGDEIGEHQGLMYHTLGQRKG 245 L TAKKKDS GICF+G+ REFL +Y+ +PG II G +IG H G +++T+GQR G Sbjct: 177 LFTAKKKDSQGICFVGKIGIREFLSQYVDTKPGDIIDQKTGKKIGTHDGAIFYTIGQRHG 236 Query: 246 LGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLHWVDREPFTGTMR 305 L IGG P+YVV K++++N + V+ H + + HW++ P G Sbjct: 237 LNIGGGL-----PYYVVGKNMQSNEVYVSNDINHNGIWRSETKIESKHWINNVPKDGNY- 290 Query: 306 CTVKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTPGQSAVFYNGEVCLGGGII 360 + R+R + T+ +VIFDEP A+ PGQS V Y+GE CLGGGII Sbjct: 291 -LARIRHRAPLVKITLLGS-----KVIFDEPQRAIAPGQSVVIYDGEECLGGGII 339 >UniRef50_O75648 Mitochondrial tRNA-specific 2-thiouridylase 1 n=19 Tax=Tetrapoda RepID=MTU1_HUMAN Length = 421 Score = 295 bits (756), Expect = 1e-78, Method: Compositional matrix adjust. Identities = 158/388 (40%), Positives = 223/388 (57%), Gaps = 36/388 (9%) Query: 3 ETAKKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYCTAAADLADAQAVC 62 + + V+ +SGGVDS+V+A LL+++GYQV G+FMKNW+ D CTA D DA VC Sbjct: 2 QALRHVVCALSGGVDSAVAALLLRRRGYQVTGVFMKNWDSLDEHGVCTADKDCEDAYRVC 61 Query: 63 DKLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGAD 122 L I H V++ EYW++VF FL EY+ GRTPNPDI+CNK IKF F +A ++LGAD Sbjct: 62 QILDIPFHQVSYVKEYWNDVFSDFLNEYEKGRTPNPDIVCNKHIKFSCFFHYAVDNLGAD 121 Query: 123 YIATGHYVR-----------------------RADVDGKSRLLRGLDSNKDQSYFLYTLS 159 IATGHY R R +V +LL+ DS KDQ++FL +S Sbjct: 122 AIATGHYARTSLEDEEVFEQKHVKKPEGLFRNRFEVRNAVKLLQAADSFKDQTFFLSQVS 181 Query: 160 HEQIAQSLFPVGELEKPQVRKIAEDLGL-VTAKKKDSTGICFIGERKFREFLGRYLPAQP 218 + + +++FP+G L K V+KIA + L +KK+S G+CFIG+R F FL +YL +P Sbjct: 182 QDALRRTIFPLGGLTKEFVKKIAAENRLHHVLQKKESMGMCFIGKRNFEHFLLQYLQPRP 241 Query: 219 GKIITVDGDEI-GEHQGLMYHTLGQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGH 277 G I+++ +++ G H+G +TLGQR +G G EPWYVV+KD + VA Sbjct: 242 GHFISIEDNKVLGTHKGWFLYTLGQRANIG------GLREPWYVVEKDSVKGDVFVAPRT 295 Query: 278 EHPRLMSVGLIAQQLHWVDREPFTGTMR-----CTVKTRYRQTDIPCTVKALDDDRIEVI 332 +HP L L ++HW+ EP +R C + R++ +PC + D + V Sbjct: 296 DHPALYRDLLRTSRVHWIAEEPPAALVRDKMMECHFRFRHQMALVPCVLTLNQDGTVWVT 355 Query: 333 FDEPVAAVTPGQSAVFYNGEVCLGGGII 360 + V A+ GQ AVFY G+ CLG G I Sbjct: 356 AVQAVRALATGQFAVFYKGDECLGSGKI 383 >UniRef50_A5FHA9 tRNA-specific 2-thiouridylase mnmA n=26 Tax=Bacteria RepID=MNMA_FLAJ1 Length = 395 Score = 294 bits (752), Expect = 5e-78, Method: Compositional matrix adjust. Identities = 169/400 (42%), Positives = 232/400 (58%), Gaps = 52/400 (13%) Query: 6 KKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDG--EEYCTAAADLADAQAVCD 63 K+V+VG+SGGVDSSV+A+LLQQQGY+V GLFMKNW +D C D DA V + Sbjct: 2 KRVVVGLSGGVDSSVAAYLLQQQGYEVIGLFMKNWHDDSVTISNECPWLEDSNDALLVAE 61 Query: 64 KLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGADY 123 KLGI TV+ + EY + + + EY+ GRTPNPD+LCN+EIKF F++ A LGADY Sbjct: 62 KLGIPFQTVDLSEEYKEKIVDYMFNEYEKGRTPNPDVLCNREIKFDVFMKIAL-SLGADY 120 Query: 124 IATGHYVRRAD--VDGKS--RLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQVR 179 +ATGHY ++++ VDGK+ +L+ G D NKDQSYFL LS EQ++++LFP+G L KP+VR Sbjct: 121 VATGHYCQKSEIEVDGKTVYQLIAGNDVNKDQSYFLCQLSQEQLSKALFPIGALTKPEVR 180 Query: 180 KIAEDLGLVTAKKKDSTGICFIGERKFREFLGRYLPAQPGKIITVD-------------- 225 +IA ++ LVTA+KKDS G+CFIG+ + EFL + L + G I+ +D Sbjct: 181 EIAAEMELVTAEKKDSQGLCFIGKVRLPEFLQQKLQPKEGTIVQIDKNDPIYNVEKQAGL 240 Query: 226 -------------------GDEIGEHQGLMYHTLGQRKGLGIGGTKEGTEEPWYVVDKDV 266 G +G+HQG Y T+GQRKGL +GGT +P +V+ DV Sbjct: 241 SLEEELKIESQKLNYRPEMGKVMGKHQGAHYFTVGQRKGLNVGGTT----DPLFVIATDV 296 Query: 267 ENNILVVAQGHEHPRLMSVGLIA--QQLHWVDREPFT----GTMRCTVKTRYRQTDIPCT 320 + N + HP L L ++HWV RE M + RYRQ T Sbjct: 297 DTNTIYTGLTSNHPGLFKKALFVGNSEVHWV-REDLKLKEGEQMEVMARIRYRQPLQKAT 355 Query: 321 VKALDDDRIEVIFDEPVAAVTPGQSAVFYNGEVCLGGGII 360 + + + V FDEP +A+T GQ +Y +G G+I Sbjct: 356 LHQFANG-MYVHFDEPQSAITEGQFVAWYLENELVGSGVI 394 >UniRef50_D0ND99 tRNA-specific 2-thiouridylase mnmA, putative n=1 Tax=Phytophthora infestans T30-4 RepID=D0ND99_PHYIN Length = 416 Score = 284 bits (727), Expect = 3e-75, Method: Compositional matrix adjust. Identities = 165/390 (42%), Positives = 220/390 (56%), Gaps = 48/390 (12%) Query: 12 MSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDD--GEEYCTAAADLADAQAVCDKLGIEL 69 MSGGVDSSV+A LL++QGY V G++MKNW+ D GE C ++ D Q VC++LGIE Sbjct: 1 MSGGVDSSVAALLLKRQGYHVTGVYMKNWDPSDEEGESACPVDSEYVDVQKVCEQLGIEA 60 Query: 70 HTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGADYIATGHY 129 VN YW+ VF LA Y+ G TPNPDILCN+EIKFKAF EFA + +GAD +ATGHY Sbjct: 61 QMVNLVQSYWNQVFAPCLAGYEEGLTPNPDILCNREIKFKAFTEFAKQ-IGADCVATGHY 119 Query: 130 --VRRADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQVRKIAEDLGL 187 +R A+ G L D +KDQSYFL ++ + A LFP+G + K +VR+IAE GL Sbjct: 120 AALRPAEKGGPPNLCAAEDESKDQSYFLSSVDGKAFANVLFPLGGMRKTEVRQIAESEGL 179 Query: 188 VTAKKKDSTGICFIGERKFREFLGRYLPAQPGKIITVDGDEIGEHQGLMYHTLGQRKGLG 247 TA KKDS GICFIG+R F +F+ +Y+ Q G TV G+++ H G +T+GQ Sbjct: 180 CTATKKDSVGICFIGKRNFADFIHQYIQRQDGYFYTVGGEKMHPHHGFTAYTVGQ----- 234 Query: 248 IGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLI--AQQLHWV--DREPF--- 300 G +G W+VV K ++ ++VA+G +P L S L A+Q +W+ D P Sbjct: 235 -GARLQGMSAKWFVVGKHKFDHSVIVAEGTRNPALFSDALFASAEQFNWMAGDLPPELRD 293 Query: 301 TGTMRCTVKTRYRQTDIPCTVKALDDDR-----------------------------IEV 331 TG MRC + RYRQ CT+ + + + V Sbjct: 294 TGRMRCFYRVRYRQDLDKCTISLVSNREARASASKLHDWQPELVANEEGVENGEKIYLRV 353 Query: 332 IFDEPVAAVTPGQSAVFYNGE-VCLGGGII 360 FD P VTP Q+ V Y + +C GGG I Sbjct: 354 DFDHPQRGVTPEQALVLYRSDGLCYGGGPI 383 >UniRef50_B0K991 tRNA-specific 2-thiouridylase mnmA 2 n=9 Tax=Clostridia RepID=MNMA2_THEP3 Length = 364 Score = 284 bits (726), Expect = 5e-75, Method: Compositional matrix adjust. Identities = 155/372 (41%), Positives = 237/372 (63%), Gaps = 20/372 (5%) Query: 3 ETAKKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEED-----DGEEYCTAAADLAD 57 E +V +GMSGGVDSSV+A+LL++QG+ V GL M+ W + D ++ C + D Sbjct: 2 EINNRVAIGMSGGVDSSVAAYLLKKQGFDVIGLTMRVWVDHEAKAFDSDKSCCSLKATQD 61 Query: 58 AQAVCDKLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAE 117 A+ V + LGI +TV+ + ++D + F+ EY GRTPNP +LCN++IKF LE A E Sbjct: 62 AKKVAEILGIPHYTVDLSKIFYDKIVNYFVNEYLKGRTPNPCVLCNRQIKFGELLEKAFE 121 Query: 118 DLGADYIATGHYVRRADVDGKSR---LLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELE 174 LGA YIATGHYVR+ + D K++ L +G+DS+KDQSY LY L+ +Q+ +LFP+G + Sbjct: 122 -LGAYYIATGHYVRK-EYDEKTKRYLLKKGIDSSKDQSYVLYRLTQKQLEHALFPLGNYK 179 Query: 175 KPQVRKIAEDLGLVTAKKKDSTGICFIGERKFREFLGRYLP--AQPGKIITVDGDEIGEH 232 K ++R +AE+L L AKK +S ICFI + + + R + +PG+ V G +G H Sbjct: 180 KEEIRALAEELKLPVAKKPESQEICFIPDNDYSGLIKRQVKDEIKPGEFRDVHGKFLGYH 239 Query: 233 QGLMYHTLGQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQL 292 +G++++T+GQR+GLG+ ++ P YVVD DV+NN++VV GH+ + LI+ Sbjct: 240 KGIIHYTIGQRRGLGL-----SSDRPLYVVDIDVKNNVVVV--GHQED-VWGEELISSNN 291 Query: 293 HWVDREPFTGTMRCTVKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTPGQSAVFYNGE 352 +++ E M+ T K RY + +K ++D++ V F +P A+TPGQS VFY+ + Sbjct: 292 NFISIEKLEKEMKVTAKIRYTAKEEEAIIKPYEEDKVLVKFLKPQRAITPGQSVVFYDKD 351 Query: 353 VCLGGGIIEQRL 364 V +GGGIIE++L Sbjct: 352 VVVGGGIIERKL 363 >UniRef50_Q3B625 tRNA-specific 2-thiouridylase mnmA n=10 Tax=Chlorobiaceae RepID=MNMA_PELLD Length = 367 Score = 283 bits (725), Expect = 5e-75, Method: Compositional matrix adjust. Identities = 157/377 (41%), Positives = 223/377 (59%), Gaps = 25/377 (6%) Query: 1 MSETAKKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYCTAAADLADAQA 60 M KKVIVG+SGGVDSSV+A +L ++GY+V GL +K +E DG + ++ Sbjct: 1 MERKKKKVIVGLSGGVDSSVAACMLVREGYEVLGLHLKVLQEGDGSTVLEPSPMTISSR- 59 Query: 61 VCDKLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLG 120 ++ I + T+N AA + + V + F EY A RTPNP ++CNK IK++ LE AA+ LG Sbjct: 60 --EEFHIPVFTLNLAARFRNEVMDYFKEEYLAARTPNPCMVCNKTIKWRGLLEGAAQ-LG 116 Query: 121 ADYIATGHYVRRADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQVRK 180 AD +ATGHY R A +DG+ RL GLD KDQSYFL+ L+ E++++++ P+G L KP+VR Sbjct: 117 ADMVATGHYARTAFIDGRHRLFAGLDRKKDQSYFLWMLAQEELSRTILPLGGLTKPEVRD 176 Query: 181 IAEDLGLVTAKKKDSTGICFIGERKFREFLGRYLPA-----QPGKIITVDGDEIGEHQGL 235 +A GL A+KK+S ICF+ + + +L +P + G+I+ G IG H+G Sbjct: 177 LARSFGLTAAEKKESQEICFVPDDDYGSYLESAVPGLHRRVEGGEILDPSGQVIGHHKGY 236 Query: 236 MYHTLGQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPR--LMSVGLIAQQLH 293 ++T+GQR+GLG T EP YV D N++ H P+ L S + L+ Sbjct: 237 PFYTIGQRRGLGT-----ATGEPLYVTAIDPIGNLV-----HTGPKSALFSTSVEVSHLN 286 Query: 294 WVDREPFTGTMRCTVKTRYRQTDIPCTVKALDDDRI----EVIFDEPVAAVTPGQSAVFY 349 W+ +P M T K RYR PCT+ L ++F EP +A+TPGQ+AVFY Sbjct: 287 WIGIDPPFAPMEATAKIRYRDHASPCTIIPLGPGPTGVTARIMFKEPKSALTPGQAAVFY 346 Query: 350 NGEVCLGGGIIEQRLPL 366 GE LGGGIIE LP+ Sbjct: 347 RGEEVLGGGIIEGALPM 363 >UniRef50_Q503J2 Mitochondrial tRNA-specific 2-thiouridylase 1 n=4 Tax=Euteleostomi RepID=MTU1_DANRE Length = 416 Score = 283 bits (725), Expect = 6e-75, Method: Compositional matrix adjust. Identities = 157/385 (40%), Positives = 206/385 (53%), Gaps = 36/385 (9%) Query: 6 KKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYCTAAADLADAQAVCDKL 65 + V+ MSGGVDSSVSA LL++ GY V G+FMKNW+ + + C++ D DA VC L Sbjct: 5 RHVVCAMSGGVDSSVSALLLKRMGYHVTGVFMKNWDSQEEKGLCSSDRDCEDAYKVCKML 64 Query: 66 GIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGADYIA 125 I H V++ EYW VF L EY+ GRTPNPDI+CNK IKFK F ++A LGAD +A Sbjct: 65 DIPFHEVSYVKEYWHEVFSNLLWEYERGRTPNPDIICNKHIKFKHFYQYAVNTLGADAMA 124 Query: 126 TGHYVR-----------------------RADVDGKSRLLRGLDSNKDQSYFLYTLSHEQ 162 TGHY R R ++ RL +G D KDQ++FL +S + Sbjct: 125 TGHYARTSQEDEEVFQQKLTEAPKSLFRDRFEIRKPVRLYQGADLLKDQTFFLSQISQDA 184 Query: 163 IAQSLFPVGELEKPQVRKIAEDLGLV-TAKKKDSTGICFIGERKFREFLGRYLPAQPGKI 221 + +LFP+ L K V+KIA + G KKK+S GICFIG+R F F+ YL +PG Sbjct: 185 LRHTLFPLAGLTKGYVKKIAAEAGFQHVLKKKESMGICFIGKRDFENFILEYLEPRPGNF 244 Query: 222 ITV-DGDEIGEHQGLMYHTLGQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHP 280 +++ DG +G+H+G TLGQR +G G + W+VVDKDV + V HP Sbjct: 245 VSIEDGQIMGKHKGWFTLTLGQRARIG------GRADAWFVVDKDVTTADVFVCPSTFHP 298 Query: 281 RLMSVGLIAQQLHWVDREP-----FTGTMRCTVKTRYRQTDIPCTVKALDDDRIEVIFDE 335 L L + HW+ EP T M C R PCTV D + V+ E Sbjct: 299 ALFRDTLQTDRFHWIAEEPPAELVHTQMMDCHFCFNNRMPLTPCTVTLNLDGSVWVMVKE 358 Query: 336 PVAAVTPGQSAVFYNGEVCLGGGII 360 P+ + GQ AV Y G CLG G I Sbjct: 359 PMRGMATGQFAVLYKGHECLGSGKI 383 >UniRef50_B1ZZ32 tRNA-specific 2-thiouridylase mnmA n=3 Tax=Verrucomicrobia RepID=MNMA_OPITP Length = 378 Score = 280 bits (715), Expect = 8e-74, Method: Compositional matrix adjust. Identities = 162/377 (42%), Positives = 213/377 (56%), Gaps = 26/377 (6%) Query: 5 AKKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNW-EEDDGEEYCTAAADLADAQAVCD 63 A+K++V MSGGVDSSV+A LL+QQGY V G +MKNW ED +C D+ DA+ V Sbjct: 4 AEKILVAMSGGVDSSVAALLLKQQGYDVVGAYMKNWINEDQVIGHCPWQQDIEDARRVAT 63 Query: 64 KLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGADY 123 ++GIE VN EY + V L Y G TPNPDI+CN+E+KF F +A +D G Sbjct: 64 QIGIEFRVVNLMREYRERVVAYLLDGYARGLTPNPDIMCNREVKFGVFRSWA-KDHGFAA 122 Query: 124 IATGHYVRRADV---------------DGKSR----LLRGLDSNKDQSYFLYTLSHEQIA 164 IATGHY +R +V DG LL G D NKDQSYFL LS EQ+ Sbjct: 123 IATGHYAQRVEVKPDLVTPAVLGGLNADGTPASTFALLEGADKNKDQSYFLALLSQEQLR 182 Query: 165 QSLFPVGELEKPQVRKIAEDLGLVTAKKKDSTGICFIGERKFREFLGRYLPAQPGKII-T 223 + FP+G L KP++R+IA + GL TA KKDS GICFIGE K ++FL Y+P PG I+ Sbjct: 183 DARFPIGHLPKPELRRIAREAGLATADKKDSQGICFIGEVKMQDFLRAYVPDAPGPIVRA 242 Query: 224 VDGDEIGEHQGLMYHTLGQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGH-EHPRL 282 DG E+G+H+GL ++TLGQRKG+GI + E + VV K + L+VA H + P L Sbjct: 243 TDGRELGQHRGLHFYTLGQRKGIGIPSNTD--HEAYVVVGKRAADRALLVAFDHPDAPGL 300 Query: 283 MSVGLIAQQLHWVDREPFTGTMRCTVKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTP 342 + L W+ + P T + RYR +P + + F P + Sbjct: 301 FQREVRVHALSWIGK-PVTTARALEGRVRYRDPRVPLEFVPESETTALIRFAAPQRGLAA 359 Query: 343 GQSAVFYNGEVCLGGGI 359 GQ FY+GE LGGG+ Sbjct: 360 GQILAFYDGERLLGGGV 376 >UniRef50_Q9W5B6 Mitochondrial tRNA-specific 2-thiouridylase 1 n=7 Tax=Sophophora RepID=MTU1_DROME Length = 389 Score = 279 bits (713), Expect = 1e-73, Method: Compositional matrix adjust. Identities = 143/365 (39%), Positives = 218/365 (59%), Gaps = 21/365 (5%) Query: 17 DSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYCTAAADLADAQAVCDKLGIELHTVNFAA 76 DS+VSA LL +QG++V G+FM+NW+E D C+ ADL DA+ C +LG+EL VN+ Sbjct: 14 DSAVSAHLLAEQGFKVLGVFMRNWDEADEVGRCSGEADLKDAEWACRQLGVELRQVNYVR 73 Query: 77 EYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGADYIATGHYVRRA--- 133 EYW VF FL +Y+ G TPNPDILCN+ IKF F + A E+LG D +ATGHY R + Sbjct: 74 EYWTAVFSQFLDDYQMGLTPNPDILCNRHIKFDLFHKHALENLGYDAVATGHYARNSLGN 133 Query: 134 -----DVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQVRKIAEDLGL- 187 + +RLL D+ KDQ++FL +S + + +++FP+G+ +K QV+ +A+ +G Sbjct: 134 YLEGIASNNDARLLIPADTFKDQTFFLAGISRKALQRTMFPLGDFQKSQVKDLAKKIGFQ 193 Query: 188 VTAKKKDSTGICFIGERKFREFLGRYLPAQPGKIITVD-GDEIGEHQGLMYHTLGQRKGL 246 AKKK+STGICF+G+R F++F+ Y+ ++ G + +D G +G H+G+ T+GQR L Sbjct: 194 RLAKKKESTGICFVGKRNFKDFIQEYITSKRGPFLDIDSGAVVGHHEGIHQWTVGQRCRL 253 Query: 247 GIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLHWVDREPF-----T 301 +P++V K+ +N + VA GH HP L+S + +W+ + T Sbjct: 254 ------SSFLQPYFVARKEAASNTIYVASGHNHPALLSTHIAVDPPNWLCSKSQQILSDT 307 Query: 302 GTMRCTVKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTPGQSAVFYNGEVCLGGGIIE 361 G++RC + ++ + + C + + V D P+ A+TPGQ AVFY+ CLG I Sbjct: 308 GSLRCRFRFQHTKPLVDCQLSISPSNTFLVELDAPLRAITPGQYAVFYDDTACLGSARIL 367 Query: 362 QRLPL 366 PL Sbjct: 368 SANPL 372 >UniRef50_B7PXE7 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase, putative n=1 Tax=Ixodes scapularis RepID=B7PXE7_IXOSC Length = 384 Score = 279 bits (713), Expect = 1e-73, Method: Compositional matrix adjust. Identities = 155/374 (41%), Positives = 215/374 (57%), Gaps = 16/374 (4%) Query: 1 MSETAKKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYCTAAADLADAQA 60 M+ +KV+ GMSGGVDSSV+A+LL++ GY V G+FM+NW+ D + +C AD DA+ Sbjct: 1 MAWRFRKVVCGMSGGVDSSVAAFLLRKSGYDVTGVFMRNWDPHDADSHCDLDADETDAKW 60 Query: 61 VCDKLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLG 120 VCD LGI TV+F YW NVF L EY+ G TPNPDI+CN+ IKF AF A + G Sbjct: 61 VCDTLGIPFMTVDFVKPYWHNVFSPMLQEYQDGLTPNPDIMCNRVIKFGAFHRHAVKRFG 120 Query: 121 ADYIATGHYVR-RADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQVR 179 AD +ATGHY R R DG LL+G+D KDQS+FL + + ++LFP+GE K QV+ Sbjct: 121 ADAVATGHYARIRNLPDGSVELLQGVDPVKDQSFFLSQVGQAALQRTLFPLGEATKGQVK 180 Query: 180 KIAEDLGL-VTAKKKDSTGICFIGERKFREFLGRYLPAQPGKIITVD-GDEIGEHQGLMY 237 +A LGL A KK+S G+CFIG++ F+ F+ +Y+ + G + ++ G +G H G+ Sbjct: 181 ALARSLGLHRVADKKESMGMCFIGKQDFQSFVEKYVEPKRGTFVDIETGKVVGSHSGVHA 240 Query: 238 HTLGQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLHWVDR 297 TLGQR LG G ++V ++VA G +HP L + HW+ R Sbjct: 241 WTLGQRCRLG------GLRSAYFVARLCPITQQILVASGWDHPALRWREMRTGAPHWI-R 293 Query: 298 EPFTG-----TMRCTVKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTPGQSAVFYNGE 352 P G RC K+++ +PCTV D + V+ D A++PGQ AVFY + Sbjct: 294 LPLVGGGGPPLARCLFKSQHLDPPVPCTVAEGPDGGLAVLLDHHKRAISPGQFAVFYGED 353 Query: 353 V-CLGGGIIEQRLP 365 C G I + P Sbjct: 354 SQCFGSAKITELGP 367 >UniRef50_Q7NBZ0 tRNA-specific 2-thiouridylase mnmA n=6 Tax=cellular organisms RepID=MNMA_MYCGA Length = 657 Score = 278 bits (711), Expect = 2e-73, Method: Compositional matrix adjust. Identities = 153/367 (41%), Positives = 216/367 (58%), Gaps = 20/367 (5%) Query: 7 KVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEED-----------DGEEYCTAAADL 55 KV+V +SGGVDS+V A+LLQQQGY V FM+NW++D D + C A D Sbjct: 288 KVVVALSGGVDSAVCAYLLQQQGYDVVAAFMQNWDKDLNFELLSDHADDQIQGCDAKQDY 347 Query: 56 ADAQAVCDKLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFA 115 D Q +C++L I+L+ NF +YW++VF L +YK G TPNPD+LCN+ KF F+ Sbjct: 348 EDTQKLCEQLKIKLYHFNFVEQYWNDVFLKVLEDYKKGLTPNPDVLCNQFGKFGWFINAL 407 Query: 116 AEDLGADY-IATGHYVRRADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELE 174 + G D IA GHY + D + L+ D NKDQ+YFL L EQ+ +FP+ EL+ Sbjct: 408 RKQFGDDIKIAFGHYAKLITKDDEVFLVHTKDHNKDQTYFLTMLKKEQLKNIIFPLSELD 467 Query: 175 KPQVRKIAEDLGLVTAKKKDSTGICFIGERKFREFLGRYLPAQPGKIITVD-GDEIGEHQ 233 KP VR+IA+ L A KKDSTGICFIGER F++FL YL + G II +D +IGEH Sbjct: 468 KPTVREIAKQANLYVANKKDSTGICFIGERNFKQFLSNYLAIKKGPIILIDENKKIGEHD 527 Query: 234 GLMYHTLGQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVA-QGHEHPRLMSVGLIAQQL 292 GL ++T+GQ + L +GGTKE +V DKD NN L V + + L SV ++ Sbjct: 528 GLYFYTIGQSRRLHVGGTKEKI----FVCDKDYNNNTLYVCYESSKDQYLSSVSCELEKF 583 Query: 293 HW-VDREPFTGTMRCTVKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTPGQSAVFYNG 351 +W +D + + ++ R+RQ C + + DD++ V + + + VTPGQ V Y+ Sbjct: 584 NWLIDTKDQLFNKKLWIRFRHRQKLQECEIVSYHDDKVIVKYTKQI-GVTPGQYGVIYDQ 642 Query: 352 EVCLGGG 358 + + GG Sbjct: 643 NLWVVGG 649 >UniRef50_D2RN19 tRNA(5-methylaminomethyl-2-thiouridylate)-methyl transferase n=2 Tax=Clostridiales RepID=D2RN19_ACIFE Length = 356 Score = 277 bits (709), Expect = 4e-73, Method: Compositional matrix adjust. Identities = 154/364 (42%), Positives = 211/364 (57%), Gaps = 18/364 (4%) Query: 7 KVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDG----EEYCTAAADLADAQAVC 62 K ++ MSGGVDSSVSA L+Q GY G MK + D + C + +D+ DA++VC Sbjct: 2 KALIAMSGGVDSSVSAKLMQDAGYDCIGCNMKLYNNPDAGYCSTKTCCSLSDVEDARSVC 61 Query: 63 DKLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGAD 122 +LG+ + N+ E+ +V E F Y G TPNP I CNK +KF A + A E LG D Sbjct: 62 ARLGMPFYVFNYTEEFKHDVMEKFARSYTLGHTPNPCIDCNKFLKFGALYQRARE-LGCD 120 Query: 123 YIATGHY--VRRADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQVRK 180 + TGHY +R+ + GK LL+ LD KDQSY LY L+ EQ+A + FP+G K R+ Sbjct: 121 CVVTGHYARIRKNETTGKYELLKALDPKKDQSYVLYNLTQEQLAHTCFPLGGYHKTHTRE 180 Query: 181 IAEDLGLVTAKKKDSTGICFIGERKFREFLGRYLP--AQPGKIITVDGDEIGEHQGLMYH 238 IAE+ G + + K DS ICF+ ++ + + R L QPG + ++G+ IG+H+G++Y+ Sbjct: 181 IAEENGFINSHKPDSQDICFVPNGQYTDAVQRILDYRPQPGPFLDLEGNVIGQHRGIIYY 240 Query: 239 TLGQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHE-HPRLMSVGLIAQQLHWVDR 297 TLGQ K LG+ + P YVV D + N +VV R SVG + +W+ Sbjct: 241 TLGQHKHLGL----NQPDFPLYVVKIDPKKNAIVVGPSEALFSRKASVG----EANWISG 292 Query: 298 EPFTGTMRCTVKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTPGQSAVFYNGEVCLGG 357 E G +RC VK RYRQ P TV D + FDEP A+TPGQ+AV Y+GEV LGG Sbjct: 293 EVPAGPVRCQVKVRYRQDAQPATVTPTGKDTFTIQFDEPQRAITPGQAAVLYDGEVVLGG 352 Query: 358 GIIE 361 G IE Sbjct: 353 GTIE 356 >UniRef50_B2UPK4 tRNA-specific 2-thiouridylase mnmA n=1 Tax=Akkermansia muciniphila ATCC BAA-835 RepID=MNMA_AKKM8 Length = 357 Score = 277 bits (709), Expect = 4e-73, Method: Compositional matrix adjust. Identities = 151/350 (43%), Positives = 209/350 (59%), Gaps = 16/350 (4%) Query: 7 KVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDG-EEYCTAAADLADAQAVCDKL 65 +++VG+SGGVDSSV+A LL +QG+ V G +MKNW D+G C D+ DA AV Sbjct: 3 RILVGLSGGVDSSVAAALLVEQGHDVVGAYMKNWVNDEGIPGECPWEQDIQDALAVAKTT 62 Query: 66 GIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGADYIA 125 GIE ++ EY + + Y+AG TPNPD+LCN+E+KF FL++A E G DY+A Sbjct: 63 GIEFRVIDLVDEYRARIVNYLIEGYRAGYTPNPDVLCNREMKFGVFLDYALEQ-GFDYVA 121 Query: 126 TGHYVRRADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQVRKIAEDL 185 TGHY RR D + +LRG D NKDQSYFL + +QIA+++FP+G+L KP+VR +AE Sbjct: 122 TGHYARRMDTPQGAFILRGRDPNKDQSYFLSLMRPDQIARAVFPLGDLLKPEVRVLAEKY 181 Query: 186 GLVTAKKKDSTGICFIGERKFREFLGRYLPAQPGKIITVDGDEIGEHQGLMYHTLGQRKG 245 GL TA+KKDS GICFIG+ K +FL YLP +PG I+ +G +G H GL T+GQRKG Sbjct: 182 GLPTARKKDSQGICFIGQVKMSDFLRHYLPDKPGNIVDTEGRTLGTHNGLHLFTMGQRKG 241 Query: 246 LGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLM-----SVGLIAQQLHWVDREPF 300 G+ +EG + VV KDV N L++ R + VG I+ L P Sbjct: 242 HGVASPREGVA--YVVVGKDVRRNRLILGYEDASTRGLYASRAVVGGISNTL-----APL 294 Query: 301 TGTMRCTVKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTPGQSAVFYN 350 R + RYR + + L++ ++ + FD P+ A+ GQ FY+ Sbjct: 295 PA--RVMAQPRYRAKAEWASCEYLEEGKVRLGFDTPLRALAVGQVCAFYD 342 >UniRef50_A4SBE4 Predicted protein n=2 Tax=Ostreococcus RepID=A4SBE4_OSTLU Length = 389 Score = 276 bits (707), Expect = 6e-73, Method: Compositional matrix adjust. Identities = 147/371 (39%), Positives = 212/371 (57%), Gaps = 21/371 (5%) Query: 6 KKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWE--EDDGEEYCTAAADLADAQAVCD 63 ++ +VG+SGGVDS+V+AW L++ G + M+NW+ ++D C+ DL A+A+ + Sbjct: 14 EEYVVGLSGGVDSAVAAWALERCGARATATLMRNWDARDEDAATDCSHRDDLKSARAIAE 73 Query: 64 KLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGADY 123 KL + +F EYW VFE ++ +++G TPNPD+ CN+ +KF A L A EDLG Y Sbjct: 74 KLNLRFIESDFTREYWHEVFEPYVEAFESGATPNPDLECNRRVKFGALLRRAMEDLGGRY 133 Query: 124 IATGHYVR-RADVD--GKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQVRK 180 +ATGHY R DVD RLLRG+D KDQSYFL ++ E + + FP+G + K + R+ Sbjct: 134 LATGHYARIDRDVDEGAPPRLLRGIDQTKDQSYFLASVRGEALRSACFPLGAVFKSETRE 193 Query: 181 IAEDLGLVTAKKKDSTGICFIGERKFREFLGRYLPAQPGKIITVDGDE----IGEHQGLM 236 A LG A ++ S GICFIG R F EF+G Y+ G + + H+GL Sbjct: 194 AARILGFDCADRRSSAGICFIGRRPFGEFIGEYITPSEGAFVDAETARPVPGAAPHRGLA 253 Query: 237 YHTLGQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLHWV- 295 +T+GQR +G G +PW+VV K+V N++ VA+G EH L S W+ Sbjct: 254 SYTVGQRAKIG------GAPKPWFVVGKNVAANVVYVAKGAEHDALYSTRAALADEFWIS 307 Query: 296 DREPF----TGTMRCTVKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTPGQSAVFYNG 351 +R P + ++R KTRY V ++ + FD P AVTPGQ+ V Y+G Sbjct: 308 NRRPTSDDGSSSVRLLAKTRYASFS-SSFVPRVESSPLRATFDRPERAVTPGQALVLYDG 366 Query: 352 EVCLGGGIIEQ 362 +VCLGGG+IE Sbjct: 367 DVCLGGGVIEH 377 >UniRef50_B3RIL6 Putative uncharacterized protein n=1 Tax=Trichoplax adhaerens RepID=B3RIL6_TRIAD Length = 369 Score = 276 bits (707), Expect = 6e-73, Method: Compositional matrix adjust. Identities = 139/366 (37%), Positives = 207/366 (56%), Gaps = 13/366 (3%) Query: 1 MSETAKKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYCTAAADLADAQA 60 MS + + + V MSGGVDS+++A+LL++QG++V G+FMKNW+ + C D+ D Sbjct: 1 MSSSRQVIAVAMSGGVDSTIAAYLLRKQGHEVVGIFMKNWDITEETGICKTDEDMQDFIK 60 Query: 61 VCDKLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLG 120 C+ LGI VNF +YW +VF F+ YK G TPNPDI CN+ IKF ++ +E+LG Sbjct: 61 SCNHLGIPHKEVNFVQDYWHHVFSPFVNGYKQGITPNPDITCNRMIKFNKLRQYCSENLG 120 Query: 121 ADYIATGHYVRRADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQVRK 180 D +ATGHY + D K +L++ +D KDQ+YFL + + +FP+G L K +V+ Sbjct: 121 VDNLATGHYAQLV-TDSKPKLIQAVDEAKDQTYFLANVKKISLKNIMFPIGNLLKSEVKN 179 Query: 181 IAEDLGL-VTAKKKDSTGICFIGERKFREFLGRYLPAQPGKIITVDGDEIGEHQGLMYHT 239 +A +GL A KK+S G+CFIG+R F+ F+ Y+ Q + T+DG G+H L T Sbjct: 180 LALKIGLRKIATKKESMGVCFIGKRNFKTFISEYIENQEYDVNTIDGQNFGKHSNLSLST 239 Query: 240 LGQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLHWVD--- 296 +G+R +G G E WYVV KD ++ +A G HP L +W+ Sbjct: 240 IGERARIG------GMSERWYVVSKDSNRKVITLAPGINHPALYCRIFYVADANWISYCA 293 Query: 297 --REPFTGTMRCTVKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTPGQSAVFYNGEVC 354 + + C ++ R+ +PC +K + +EV + + AVTPGQ A FY+ C Sbjct: 294 EMQLSLRKELECHIRIRHLAPLVPCLIKLQYNGFLEVNSQQSLFAVTPGQFAAFYSRNEC 353 Query: 355 LGGGII 360 LGGG I Sbjct: 354 LGGGQI 359 >UniRef50_D2V0M5 Predicted protein n=1 Tax=Naegleria gruberi RepID=D2V0M5_NAEGR Length = 408 Score = 276 bits (707), Expect = 7e-73, Method: Compositional matrix adjust. Identities = 154/382 (40%), Positives = 221/382 (57%), Gaps = 37/382 (9%) Query: 7 KVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNW---EEDDGEEYCTAAADLADAQAVCD 63 +++VGMSGGVDSS++A LL++ G+ V L M+NW EED E+CT D D + +C+ Sbjct: 33 RIVVGMSGGVDSSLTACLLKEFGFDVVSLHMRNWDSSEEDPSREHCTFTKDWNDVKVICE 92 Query: 64 KLGIE-----LHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAED 118 GI+ H V F +YW++VFE L Y G+TPNPD+ CNK IKF A L +A E Sbjct: 93 TFGIKHVGSSFHPVEFIDQYWNDVFEKLLDGYSIGQTPNPDLFCNKFIKFDAMLNYAIEK 152 Query: 119 LGADYIATGHYVRRADVDG----KSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGE-L 173 GADYIATGHY + D + LLR +D +KDQSYFL ++ + +SLFP+G+ L Sbjct: 153 GGADYIATGHYAQLGYSDNGETSNTHLLRAIDHSKDQSYFLSFVNKKAFEKSLFPLGQFL 212 Query: 174 EKPQVRKIAEDLGLVTAK---KKDSTGICFIGERKFREFLGRYLPAQPGKIITVDGDE-- 228 +K +VR +A D + +KDS GICFIG+RKF++FL +Y+ + G I++++ Sbjct: 213 KKEEVRVLARDHFKFPNELWGRKDSVGICFIGKRKFKDFLSKYIDSSKGNIVSIEDKTTI 272 Query: 229 IGEHQGLMYHTLGQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLI 288 +GEH G ++T+GQ G+ + G K E W+V +KD +NNIL V G+ HP L+ Sbjct: 273 LGEHDGASFYTIGQ--GMCLSGMK----EKWFVCEKDFKNNILYVCPGNNHPSLLKSSFT 326 Query: 289 AQQLHWVDREPFTGTMRCTVKTRYRQTD-IPCTVKALDDDRIEVIF----DEPVAAVTPG 343 HW+ E + VK RY Q + C V +D + I +EP + G Sbjct: 327 ISNCHWL--ENIDNSKEYFVKVRYNQREPFRCKVSYSNDSSLCDITLADSEEPARGIASG 384 Query: 344 QSAVFYNG------EVCLGGGI 359 Q AV Y+ ++C+GGGI Sbjct: 385 QIAVLYDSNSQFSEQICVGGGI 406 >UniRef50_A5GE36 tRNA-specific 2-thiouridylase mnmA n=20 Tax=Bacteria RepID=MNMA_GEOUR Length = 375 Score = 273 bits (697), Expect = 1e-71, Method: Compositional matrix adjust. Identities = 158/369 (42%), Positives = 223/369 (60%), Gaps = 24/369 (6%) Query: 6 KKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWE-----EDDGEEY--CTAAADLADA 58 K+V++ MSGGVDSSV+A LL+++G++V G+ M+ W+ ++GE++ C + D+ DA Sbjct: 8 KRVVIAMSGGVDSSVAAALLKEEGHEVIGISMQVWDYTRFTAEEGEKFDTCCSLDDIHDA 67 Query: 59 QAVCDKLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAED 118 + V ++L I + VNF E+ + V + F+ EY GRTPNP + CN+ IKF+ L+ A Sbjct: 68 RRVAEQLEIPFYVVNFEEEFQNLVIDDFVNEYLLGRTPNPCVRCNQWIKFELLLK-KARG 126 Query: 119 LGADYIATGHYVR-RADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQ 177 LGAD IATGHY R D DG+ RL++G+D KDQSYFL+TL+ EQ+A +LFP+G + K + Sbjct: 127 LGADMIATGHYARTEQDADGRYRLMKGVDPAKDQSYFLFTLTQEQLAMTLFPLGGMTKQE 186 Query: 178 VRKIAEDLGLVTAKKKDSTGICFIGERKFREFLGRYLPAQ--PGKIITVDGDEIGEHQGL 235 VR +A GL A+K +S ICF+ + + F+ Q G I+ G +G H G Sbjct: 187 VRALAAGYGLRVAEKGESQEICFVPDNDYVRFIEEERGKQLLSGNIVDRKGKVLGVHDGT 246 Query: 236 MYHTLGQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPR--LMSVGLIAQQLH 293 +T+GQRKGLGI EP YV+ D + V PR L S GLIA ++ Sbjct: 247 YRYTVGQRKGLGI-----AHPEPLYVLGVDAARKEVTVG-----PRDALYSDGLIATAIN 296 Query: 294 WVDREPFTGTMRCTVKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTPGQSAVFYNGEV 353 W+ P T + + K RYR IPC + L D+R EV F E +VTPGQ+ VFY+G+ Sbjct: 297 WIAPTPETA-IEASCKIRYRHHPIPCRILPLADNRAEVRFTEREKSVTPGQAVVFYDGDT 355 Query: 354 CLGGGIIEQ 362 LGGG IE Sbjct: 356 VLGGGWIEH 364 >UniRef50_C9KPU1 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase n=2 Tax=Clostridiales RepID=C9KPU1_9FIRM Length = 366 Score = 272 bits (695), Expect = 2e-71, Method: Compositional matrix adjust. Identities = 154/368 (41%), Positives = 224/368 (60%), Gaps = 16/368 (4%) Query: 4 TAKKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEE----DDGEEYCTAAADLADAQ 59 T KKV+V MSGGVDSS++A LL++QGY+ G+ M+ EE D+ + C + + + DA+ Sbjct: 2 TKKKVVVAMSGGVDSSLTAALLKEQGYEAIGVTMRLSEESRDFDENDRGCCSLSSVDDAR 61 Query: 60 AVCDKLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDL 119 V + +GI +T+NF + + V + FLA+Y G TPNP I CN+ +KF+ L+ A E L Sbjct: 62 RVAEIIGIPHYTMNFKEMFQEKVIDYFLADYAKGWTPNPCIACNRYVKFEGLLQKAME-L 120 Query: 120 GADYIATGHYVRRA-DVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQV 178 GADY+ATGHY R A D G+ L +G+D++KDQSY LY L+ + +A L P+G+ K + Sbjct: 121 GADYVATGHYARIAQDESGRYVLKKGIDTHKDQSYALYHLNQQSLAHFLMPLGDYTKVET 180 Query: 179 RKIAEDLGLVTAKKKDSTGICFIGERKFREFLGRYLPA--QPGKIITVDGDEIGEHQGLM 236 R++AE L A K DS ICF+ ++ +L P+ PG I+ +G +G H+G+ Sbjct: 181 REMAERYKLPVAHKPDSQEICFVPHDDYKAYLRAKNPSCLHPGDIVDKEGHVLGHHEGVP 240 Query: 237 YHTLGQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLHWVD 296 +T+GQRKGLGI EP YVVD D+ +N +VV + + S GLIA L+W+ Sbjct: 241 LYTIGQRKGLGIA-----HPEPLYVVDLDMAHNRVVVGGAGD---VFSDGLIAGDLNWIA 292 Query: 297 REPFTGTMRCTVKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTPGQSAVFYNGEVCLG 356 + + T K RY + + V+ L ++ V F EP AVTPGQS VFY G+ +G Sbjct: 293 IDALEAPIEVTAKVRYGRREGRAHVEPLAGGKVRVHFAEPQRAVTPGQSVVFYAGDTVVG 352 Query: 357 GGIIEQRL 364 GGIIE+ + Sbjct: 353 GGIIEKAI 360 >UniRef50_UPI000069DE11 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase (EC 2.1.1.61) (Mitochondrial tRNA-specific 2-thiouridylase 1) (MTO2 homolog). n=6 Tax=Euteleostomi RepID=UPI000069DE11 Length = 372 Score = 270 bits (689), Expect = 8e-71, Method: Compositional matrix adjust. Identities = 146/349 (41%), Positives = 199/349 (57%), Gaps = 37/349 (10%) Query: 3 ETAKKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYCTAAADLADAQAVC 62 +T ++V+ MSGGVDSSV+A LL+++GY+V G+FM NW+ D C+A D DA VC Sbjct: 2 QTVRRVVCAMSGGVDSSVAALLLRRRGYEVTGVFMNNWDAVDEHGVCSAERDCEDAYRVC 61 Query: 63 DKLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGAD 122 KL I H V++ EYW VF FL EY+ GRTPNPDILCNK IKF FL +A + LGAD Sbjct: 62 KKLDIPFHQVSYVKEYWHEVFSYFLNEYEKGRTPNPDILCNKHIKFNHFLSYAIDILGAD 121 Query: 123 YIATGHYVR-----------------------RADVDGKSRLLRGLDSNKDQSYFLYTLS 159 IATGHY R R ++ ++LL+ D KDQ++FL +S Sbjct: 122 AIATGHYARTSLEDEEIFQQKYIKSPQNLFRNRFEIRHDAKLLQAADRIKDQTFFLSQIS 181 Query: 160 HEQIAQSLFPVGELEKPQVRKIAEDLGL-VTAKKKDSTGICFIGERKFREFLGRYLPAQP 218 + +++FP+GEL K V+KIA + G K+K+S GICFIGER F F+ YL AQP Sbjct: 182 QYALRKTIFPLGELTKDFVKKIAAEAGFHHVLKRKESMGICFIGERNFENFILEYLEAQP 241 Query: 219 GKIITV-DGDEIGEHQGLMYHTLGQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGH 277 G ++ DG +G H+G TLGQR +G G + W+VVDKDV + VA Sbjct: 242 GNFVSAEDGKIMGRHKGWFLFTLGQRARIG------GQRDAWFVVDKDVTTGNVYVAPTT 295 Query: 278 EHPRLMSVGLIAQQLHWVDREP-----FTGTMRCTVKTRYRQTDIPCTV 321 +HP L L ++HW+ +P M C + ++ Q + C+V Sbjct: 296 DHPALYRDLLRTDRMHWLSEDPPDELVKNKMMECHFRFQH-QMALVCSV 343 >UniRef50_A8DJE2 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase n=1 Tax=Candidatus Chloracidobacterium thermophilum RepID=A8DJE2_9BACT Length = 392 Score = 268 bits (685), Expect = 2e-70, Method: Compositional matrix adjust. Identities = 153/393 (38%), Positives = 213/393 (54%), Gaps = 45/393 (11%) Query: 6 KKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEED----DGE-----EYCTAAADLA 56 +++ V MSGGVDSS +A LL++QGY V G M+ W + D E C + DL Sbjct: 3 ERIAVAMSGGVDSSTAAALLKEQGYDVVGFSMQLWNQRRINVDAEGNPLPSRCCSLDDLY 62 Query: 57 DAQAVCDKLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAA 116 DA+AV + LGI + +NF E+ V F+ Y G TP+P + CN +KF + A Sbjct: 63 DARAVAEALGIPFYVLNFEEEFEARVVRPFVVSYLNGNTPSPCVACNSRMKFDTLVALA- 121 Query: 117 EDLGADYIATGHYVRRA--DVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELE 174 D+GA +ATGHY R D G+ L +G D +KDQSYFL+ L+ EQ+A +LFP+GEL Sbjct: 122 RDVGAAKVATGHYARVQFNDTTGRWELRKGRDLHKDQSYFLFELTQEQLAWALFPLGELS 181 Query: 175 KPQVRKIAEDLGLVTAKKKDSTGICFIGERKFREFLGRYLP------------------- 215 K + R +A GL TA+K +S ICFI + + F+ RYL Sbjct: 182 KAETRALARRYGLPTAEKAESQEICFIPDGNYARFIERYLAEAGGTVAGEPQSPVAPTLV 241 Query: 216 --------AQPGKIITVDGDEIGEHQGLMYHTLGQRKGLGIGGTKEGTEEPWYVVDKDVE 267 QPG+I+T DG +G H G+ ++T+GQR+GLG+ G P YVV D Sbjct: 242 QLGLRRNMPQPGEIVTTDGRVLGRHNGIHHYTVGQRRGLGV---TAGDGRPLYVVRIDAA 298 Query: 268 NNILVVAQGHEHPRLMSVGLIAQQLHWVDREPFTGTMRCTVKTRYRQTDIPCTVKALDDD 327 ++V G E L L A +++W+ T RC + RYR + P T+ L D Sbjct: 299 RGQVIV--GPEEA-LTGKTLTATRVNWITLPELTAPRRCAARIRYRHLEAPATIYPLPDG 355 Query: 328 RIEVIFDEPVAAVTPGQSAVFYNGEVCLGGGII 360 + V+FD P A+TPGQ+ VFY+GE+ LGGG I Sbjct: 356 NVRVVFDIPQKAITPGQAVVFYDGELVLGGGWI 388 >UniRef50_C0E8G4 Putative uncharacterized protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0E8G4_9CLOT Length = 352 Score = 268 bits (685), Expect = 2e-70, Method: Compositional matrix adjust. Identities = 149/359 (41%), Positives = 216/359 (60%), Gaps = 16/359 (4%) Query: 9 IVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDD----GEEYCTAAADLADAQAVCDK 64 ++GMSGGVDSSV+A LL +QGY+V G + W+ +D E C + D+ DA+ VC + Sbjct: 1 MIGMSGGVDSSVAAALLIEQGYEVVGATFRLWKPEDDLFDSEATCCSLDDINDAREVCHQ 60 Query: 65 LGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGADYI 124 LGI + +N E+ + V + F+ EY+AGRTPNP I+CN++IKF F + AA LG DY+ Sbjct: 61 LGIPHYVLNLKREFKEAVVQNFVEEYQAGRTPNPCIVCNQKIKFDYFYQKAAA-LGFDYV 119 Query: 125 ATGHYVR-RADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQVRKIAE 183 ATGHY R + G+ +L + KDQSYFLY + + + LFP+G KPQVR++AE Sbjct: 120 ATGHYARIEQNEQGEFQLKTAAYAQKDQSYFLYGIPYPNLGHILFPLGGYTKPQVRELAE 179 Query: 184 DLGLVTAKKKDSTGICFIGERKFREFLGRYLPAQP--GKIITVDGDEIGEHQGLMYHTLG 241 G + K+DS ICF+ + FL R+ P G I G +GEH+G+ ++T+G Sbjct: 180 KYGFSVSHKRDSQEICFVDRNGYGTFLERFTGTIPPKGNFIDSQGTVLGEHKGIWHYTVG 239 Query: 242 QRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLHWVDREPFT 301 QRKGLG+ K P YV + + +N + + E+ S L A++++++ P + Sbjct: 240 QRKGLGMAFGK-----PMYVSEINPADNTVRLVDDEEN---YSSRLTAERMNYLIPHPPS 291 Query: 302 GTMRCTVKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTPGQSAVFYNGEVCLGGGII 360 +R VK R R P + L + +IE+ FD+P A+T GQSAV Y+GEVCLGGGII Sbjct: 292 KPVRVQVKIRNRAEFAPALLTPLSEAKIELAFDQPQRAITKGQSAVLYDGEVCLGGGII 350 >UniRef50_A8Z5W4 tRNA-specific 2-thiouridylase mnmA n=1 Tax=Candidatus Sulcia muelleri GWSS RepID=MNMA_SULMW Length = 380 Score = 266 bits (679), Expect = 1e-69, Method: Compositional matrix adjust. Identities = 158/391 (40%), Positives = 219/391 (56%), Gaps = 41/391 (10%) Query: 1 MSETAKKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYCTAAADLADAQA 60 M+ K+VIVGMSGGVDSSV+A LL++QGY V G+FMK + + C D DA Sbjct: 1 MNVKRKRVIVGMSGGVDSSVAALLLKKQGYDVIGIFMKYYNFE-----CPWREDSIDAML 55 Query: 61 VCDKLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLG 120 V L I + ++ Y + + + EYK G TPNPDI+CN +IKFK FLE + L Sbjct: 56 VSQSLKIPFYIIDITKNYKNLIIDYLYKEYKKGYTPNPDIICNSKIKFKFFLE-KSIFLK 114 Query: 121 ADYIATGHYVRRADVD--GK--SRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKP 176 +D+IATGHYVR+ +++ GK +++ G+DSNKDQSYFL L+ QI +S+FP+G L K Sbjct: 115 SDFIATGHYVRKKEINENGKISYKIISGIDSNKDQSYFLCKLNKVQIKKSIFPLGWLNKK 174 Query: 177 QVRKIAEDLGLVTAKKKDSTGICFIGERKFREFLGRYLPAQPGKIITVD----------- 225 +VR+IA L+ A KKDS GICFIG+ KF FL + L + G II ++ Sbjct: 175 EVREIANKYNLINANKKDSQGICFIGKIKFLNFLKKKLAEKKGIIIEINKNSHIFKYKQK 234 Query: 226 -------------GDEIGEHQGLMYHTLGQRKGLGIGGTKEGTEEPWYVVDKDVENNILV 272 G IG H G Y T GQRKGL IGG K P +V++KD+ NIL Sbjct: 235 KLFSKKIEYKKEYGKIIGHHIGAHYFTKGQRKGLKIGGYK----YPLFVIEKDITKNILY 290 Query: 273 VAQGHEHPRLMS--VGLIAQQLHWVDREPFTGTMRCTVKTRYRQTDIPCTVKALDDDRIE 330 V G HP L + + + +HW++++ + + RYRQ T+ ++D + Sbjct: 291 VGMGKNHPGLYTKVICIKKYNIHWINKKKIKTKIEVECRIRYRQNFKKATLYKKNND-LY 349 Query: 331 VIFDEPVAAVTPGQSAVFYNGEVCLGGGIIE 361 V F+ P AV GQ V+Y +G G+I Sbjct: 350 VEFEIPQLAVNGGQFIVWYINNEVIGSGLIS 380 >UniRef50_A6LSF2 tRNA-specific 2-thiouridylase mnmA n=19 Tax=Clostridiales RepID=MNMA_CLOB8 Length = 358 Score = 265 bits (677), Expect = 2e-69, Method: Compositional matrix adjust. Identities = 143/364 (39%), Positives = 217/364 (59%), Gaps = 19/364 (5%) Query: 6 KKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEY------CTAAADLADAQ 59 KKV+VGMSGGVDSSV+A+LL+QQGY V G M+ W+ D EE+ C + + + DA+ Sbjct: 3 KKVLVGMSGGVDSSVAAYLLKQQGYDVIGATMQIWQHD--EEFEEREGGCCSLSAVDDAR 60 Query: 60 AVCDKLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDL 119 VCDKL I + +NF + + V + F+ EY G+TPNP I CNK +KF L A + Sbjct: 61 RVCDKLDIPFYVLNFRDYFKEKVIDKFVQEYIDGKTPNPCIECNKHLKFDELLR-RARGI 119 Query: 120 GADYIATGHYVRRADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQVR 179 GADY+ATGHY + D + L+R D KDQ+Y LY + +Q+ +L P G+ EK ++R Sbjct: 120 GADYVATGHYAKIEKRDDRYLLIRSDDDRKDQTYALYNFTQDQLEHTLMPCGDYEKTKIR 179 Query: 180 KIAEDLGLVTAKKKDSTGICFIGERKFREFLGRYLP--AQPGKIITVDGDEIGEHQGLMY 237 +IA+++GL KKDS ICFI + +++ P +PG + G+ +G+H+G++Y Sbjct: 180 EIAKEIGLAVHNKKDSEEICFISDNNHGKYISEAEPNRVKPGNFVDKSGNILGKHKGIVY 239 Query: 238 HTLGQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLHWVDR 297 +T+GQRKGLG+ + P +V + + + N +V+ + + LIA ++++ Sbjct: 240 YTIGQRKGLGLSLGR-----PVFVTNINAKTNEVVLGSEDD---IFKTELIATDVNFIPF 291 Query: 298 EPFTGTMRCTVKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTPGQSAVFYNGEVCLGG 357 + + T K RY T+ L + R++VIF E A+T GQS VFY+ E+ +GG Sbjct: 292 DKLEKEIEVTAKIRYSARPAEATLIPLPNGRVKVIFKEKQRAITKGQSVVFYDDEIVVGG 351 Query: 358 GIIE 361 GIIE Sbjct: 352 GIIE 355 >UniRef50_C7MLV9 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase n=1 Tax=Cryptobacterium curtum DSM 15641 RepID=C7MLV9_CRYCD Length = 394 Score = 265 bits (677), Expect = 2e-69, Method: Compositional matrix adjust. Identities = 157/357 (43%), Positives = 211/357 (59%), Gaps = 14/357 (3%) Query: 7 KVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYCTAAADLADAQAVCDKLG 66 +V+VG+SGGVDSSV A LL + G+ V G +MKNW D C A DLADA+ V +LG Sbjct: 50 RVLVGLSGGVDSSVCAALLVETGWDVCGAYMKNWTMDVPGMRCPWADDLADAKRVAVRLG 109 Query: 67 IELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGADYIAT 126 I+ +F Y V + + EY+AGRTPNPD++CN+++KF F + AA+D G DYIAT Sbjct: 110 IDFRVYDFQEAYKREVVDYLVDEYRAGRTPNPDVMCNQQVKFGLFFD-AAQDDGFDYIAT 168 Query: 127 GHYVRRADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQVRKIAEDLG 186 GHY R + RLLR D++KDQ+YFLY +S + +A ++FP+G L K QVR AE Sbjct: 169 GHYARAS--HDPVRLLRAADTHKDQTYFLYRMSSDAVAHTIFPLGGLLKTQVRAAAEQRN 226 Query: 187 LVTAKKKDSTGICFIGERKFREFLGRYLPAQPGKIITVD-GDEIGEHQGLMYHTLGQRKG 245 L TA K DS GICF+GE +FL Y+ QPG II D G+ +G H G ++ T+GQR G Sbjct: 227 LSTAHKADSQGICFVGEAGICDFLSLYVHPQPGPIIDDDTGETVGYHDGAIFFTIGQRHG 286 Query: 246 LGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLHWV-DREPFTGTM 304 LGIGG + + VV KD+++NIL V G P S+ L ++ W+ D P G Sbjct: 287 LGIGGGRR-----YRVVRKDMDHNILYVHDGPLAPVQDSL-LELDRVRWIADVPPQEGA- 339 Query: 305 RCTVKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTPGQSAVFYNGEVCLGGGIIE 361 C V+T + + + V + AV GQS V Y G+ CLGGGI+ Sbjct: 340 -CEVRTHHGEKLLA-ATLLATATTATVQLEADHDAVASGQSVVIYRGQECLGGGIVR 394 >UniRef50_Q17440 Probable mitochondrial tRNA-specific 2-thiouridylase 1 n=2 Tax=Chromadorea RepID=MTU1_CAEEL Length = 375 Score = 264 bits (674), Expect = 4e-69, Method: Compositional matrix adjust. Identities = 149/371 (40%), Positives = 218/371 (58%), Gaps = 22/371 (5%) Query: 7 KVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWE-EDDGEEYCTAAADLADAQAVCDKL 65 +V++GMSGGVDS+VSA+LL+++G+ V GL M NW+ +++G +C + D +DA+ VCD+L Sbjct: 3 RVVIGMSGGVDSAVSAFLLKKRGFDVIGLHMINWDVQEEGTSHCPRSKDESDARNVCDRL 62 Query: 66 GIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGADYIA 125 I HTVNF EYW++VF FL YK GRT PDI CN+ IKF F + A E AD+IA Sbjct: 63 NIPFHTVNFVKEYWNDVFLKFLENYKNGRTTVPDIDCNQSIKFDVFHKIAREKFNADFIA 122 Query: 126 TGHYV--------RRADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQ 177 TGHY + A + RL G D KDQ++FL T++ EQ+ +++FP+G L+K + Sbjct: 123 TGHYATTNFGDFQQNAKDSDEIRLFSGKDPLKDQTFFLCTVNQEQLKRAMFPLGSLQKSE 182 Query: 178 VRKIAEDLGLV-TAKKKDSTGICFIGERK-FREFLGRYLPAQPGKIITVDGDEIGEHQGL 235 V++IAE+ G AKK +S GICFIG++K F +FL Y+ +PG+I+ +G EIG H G+ Sbjct: 183 VKRIAEEQGFQEVAKKPESMGICFIGKKKRFSDFLDEYIEPKPGRILLKNGSEIGNHHGI 242 Query: 236 MYHTLGQRKGLGIGGT--KEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLH 293 T+G+R I G + + ++V + ++ +G HP L + + Sbjct: 243 HQFTIGKR----INGKYLEARSHLGFFVSHIHSDTGDIIACEGSHHPDLYASRFLINHPK 298 Query: 294 WVDR-EPFTGTMRCTVKTRYRQTD--IPCTVKALDDDRIEVIFDEPVAAVTPGQSAVFYN 350 W+ +PF R ++T IPC V + + VI + A PGQ VFYN Sbjct: 299 WIRTFDPFNRISSNNFLCRIQRTHPPIPC-VAEKQEQFLSVIPRLALRATAPGQMCVFYN 357 Query: 351 GEV-CLGGGII 360 + CLGGG I Sbjct: 358 TKNECLGGGEI 368 >UniRef50_Q3DBK5 TRNA methyl transferase (Fragment) n=5 Tax=cellular organisms RepID=Q3DBK5_STRAG Length = 204 Score = 263 bits (673), Expect = 6e-69, Method: Compositional matrix adjust. Identities = 124/196 (63%), Positives = 157/196 (80%), Gaps = 2/196 (1%) Query: 7 KVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYCTAAADLADAQAVCDKLG 66 +V+VGMSGGVDSSV+A LL++QGY V G+FMKNW++ D CTA D D AV D++G Sbjct: 8 RVVVGMSGGVDSSVTALLLKEQGYDVIGVFMKNWDDTDEFGVCTATEDYKDVAAVADQIG 67 Query: 67 IELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGADYIAT 126 I ++VNF EYWD VFE FLAEY+AGRTPNPD++CNKEIKFKAFL++A LGADY+AT Sbjct: 68 IPYYSVNFEKEYWDRVFEYFLAEYRAGRTPNPDVMCNKEIKFKAFLDYAMT-LGADYVAT 126 Query: 127 GHYVR-RADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQVRKIAEDL 185 GHY + D +G +LRG+D+NKDQ+YFL LS EQ+ ++LFP+G L+KP+VR+IAE+ Sbjct: 127 GHYAQVTRDKNGIVHMLRGVDNNKDQTYFLSQLSQEQLQKTLFPLGHLQKPEVRRIAEEA 186 Query: 186 GLVTAKKKDSTGICFI 201 GL TAKKKDSTGICF+ Sbjct: 187 GLATAKKKDSTGICFM 202 >UniRef50_B0MKE4 Putative uncharacterized protein n=3 Tax=Clostridiales RepID=B0MKE4_9FIRM Length = 387 Score = 261 bits (667), Expect = 3e-68, Method: Compositional matrix adjust. Identities = 145/367 (39%), Positives = 218/367 (59%), Gaps = 21/367 (5%) Query: 5 AKKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMK--NWEEDDGEEYCTAAADLADAQAVC 62 A+K+ + MSGGVDSSV+ LL+ + Y+V G +K + D C +A+D+ DA+A+ Sbjct: 30 AEKLAIAMSGGVDSSVALVLLKDK-YEVSGYTLKLHDSRGTDDSGLCGSASDIEDAKAIA 88 Query: 63 DKLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGAD 122 K G+ + ++ + D V + F+ Y +GRTPNP + CN+ IKF A L+ A + G + Sbjct: 89 AKFGVPHYLLDMRDLFSDTVQKSFVQSYLSGRTPNPCVECNETIKFGALLD-AVKKQGIN 147 Query: 123 YIATGHYVRRADVDGKSRLL-------RGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEK 175 +IATGHYVR + R L G + KDQSY LY LS +Q+A S+FP+GE+ K Sbjct: 148 HIATGHYVRSCYDEKSGRWLLKKAINADGTSNAKDQSYVLYRLSQQQLAASVFPLGEMTK 207 Query: 176 PQVRKIAEDLGLVTAKKKDSTGICFIGERKFREFLGRYLPAQ--PGKIITVDGDEIGEHQ 233 ++R IA D GL+ + K DS ICF+ + + F+ RY G + +G+ IG H+ Sbjct: 208 DEIRHIAADSGLINSDKPDSQDICFVPDGDYAGFIERYTGNTYPDGDFLDENGNVIGRHK 267 Query: 234 GLMYHTLGQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLH 293 G++++T+GQR+G+G G K P YV+ K+ +NN + + + L + L A L+ Sbjct: 268 GVIFYTIGQRRGIGTGFGK-----PMYVIGKNADNNTVTLG---SNELLFTDTLYADNLN 319 Query: 294 WVDREPFTGTMRCTVKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTPGQSAVFYNGEV 353 W+ E +C KTRYRQT+ PCTV + + V+FDE + AVTPGQ VFY+G++ Sbjct: 320 WIAFEYPESEFKCRAKTRYRQTEQPCTVYPQGRNTVRVVFDEKIRAVTPGQHVVFYDGDI 379 Query: 354 CLGGGII 360 LGGG+I Sbjct: 380 VLGGGVI 386 >UniRef50_C0B5F7 Putative uncharacterized protein n=2 Tax=Lachnospiraceae RepID=C0B5F7_9FIRM Length = 359 Score = 261 bits (666), Expect = 3e-68, Method: Compositional matrix adjust. Identities = 145/365 (39%), Positives = 225/365 (61%), Gaps = 21/365 (5%) Query: 6 KKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDG---EEY--CTAAADLADAQA 60 KKV+VGMSGGVDSSV+A+LL++QGY V G+ M+ W++++ EE C + + DA+ Sbjct: 4 KKVVVGMSGGVDSSVAAYLLKEQGYDVIGVTMQIWQDEESKIQEENGGCCGLSAVDDARK 63 Query: 61 VCDKLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLG 120 V ++GI + +NF ++ + V + F+ EY GRTPNP I CN+ +K+++ L + E +G Sbjct: 64 VAAQIGIPYYVMNFKKDFQEKVIDYFVDEYLHGRTPNPCIACNRYVKWESLLTRSME-IG 122 Query: 121 ADYIATGHYVRRADV-DGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQVR 179 ADYIATGHY R + +G+ + +KDQ+Y LY L+ +Q+ ++L PVGE EK Q+R Sbjct: 123 ADYIATGHYARVEQLPNGRYAIRHSATWSKDQTYALYNLTQDQLRRTLMPVGEYEKDQIR 182 Query: 180 KIAEDLGLVTAKKKDSTGICFIGERKFREFL----GRYLPAQPGKIITVDGDEIGEHQGL 235 +IA+++GL A K DS ICF+ + + F+ + +P G +T DG +G H+G+ Sbjct: 183 EIAKEIGLQIANKPDSQDICFVSDDDYASFIEEESDQKIPE--GNFVTPDGKILGRHKGI 240 Query: 236 MYHTLGQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLHWV 295 +++T+GQRKGLG+ P +V++ + N +V+ + LM+ + A +L+++ Sbjct: 241 IHYTIGQRKGLGL-----SLGYPAFVLEIRPDTNEVVIGTNED---LMTTRVRANKLNFM 292 Query: 296 DREPFTGTMRCTVKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTPGQSAVFYNGEVCL 355 E G MR K RY CTV+ +D IE IF+ P AVTPGQ+ V Y+G+ L Sbjct: 293 TVEDLEGEMRVFAKIRYNHKGDWCTVRKTGEDEIECIFETPQRAVTPGQALVLYDGDYVL 352 Query: 356 GGGII 360 GGG I Sbjct: 353 GGGTI 357 >UniRef50_C4ZB38 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase n=3 Tax=Firmicutes RepID=C4ZB38_EUBR3 Length = 362 Score = 261 bits (666), Expect = 4e-68, Method: Compositional matrix adjust. Identities = 143/367 (38%), Positives = 218/367 (59%), Gaps = 17/367 (4%) Query: 6 KKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDD-----GEEYCTAAADLADAQA 60 KKV+VGMSGGVDSSV+A+LL++QGY V G+ M+ W+++D E C + + DA+ Sbjct: 3 KKVVVGMSGGVDSSVAAYLLKEQGYDVIGVTMQIWQDEDVFKQSQEGGCCGLSAVEDARR 62 Query: 61 VCDKLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLG 120 V L I + +NF A++ V + F++EY+ TPNP I CN+ +K+++ L + E +G Sbjct: 63 VAAVLDIPYYVMNFKADFKKYVIDYFVSEYERAYTPNPCIACNRYVKWESLLHRSLE-IG 121 Query: 121 ADYIATGHYVRRADV-DGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQVR 179 ADYIATGHY R A + +G+ + + + KDQ+Y LY L+ EQ+ ++L PVGE EKPQ+R Sbjct: 122 ADYIATGHYARIAQLPNGRYTIANSVTAEKDQTYALYNLTQEQLRRTLMPVGEYEKPQIR 181 Query: 180 KIAEDLGLVTAKKKDSTGICFIGERKFREFLGRYL--PAQPGKIITVDGDEIGEHQGLMY 237 +IAE+ GL A K DS ICF+ + + F+ +PG + G+ +G H+GL++ Sbjct: 182 RIAEEAGLPVAHKSDSQDICFVPDHDYASFIENETGKTYEPGNFVDESGNILGRHKGLIH 241 Query: 238 HTLGQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLHWVDR 297 +T+GQRKGLGI P +V + N +V++ L S ++++ + Sbjct: 242 YTIGQRKGLGITAAT-----PLFVKELRPATNEVVISTNES---LFSDTCYISDINYMAQ 293 Query: 298 EPFTGTMRCTVKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTPGQSAVFYNGEVCLGG 357 E T R K RY CT+ +++ I+ +FDEP A+TPGQ+AVFY L G Sbjct: 294 EHITPDTRSIGKVRYSHRGADCTLTPMENGMIKCVFDEPQRAMTPGQAAVFYQDGHVLCG 353 Query: 358 GIIEQRL 364 G IE+ + Sbjct: 354 GTIEKMM 360 >UniRef50_D0WIU4 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase n=1 Tax=Slackia exigua ATCC 700122 RepID=D0WIU4_9ACTN Length = 362 Score = 260 bits (664), Expect = 7e-68, Method: Compositional matrix adjust. Identities = 150/368 (40%), Positives = 209/368 (56%), Gaps = 25/368 (6%) Query: 6 KKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEED--------DGEEYCTAAADLAD 57 K+V+VGMSGGVDSSV+A++L+QQGY+V G M+ D C + D+ D Sbjct: 3 KRVMVGMSGGVDSSVTAYVLKQQGYEVIGATMRLHGSDLPGRDARSCASRTCCSLDDVED 62 Query: 58 AQAVCDKLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAE 117 A++V +LGI T++F + D V + F+ Y+ RTPNP I CN+ +KF + LE A Sbjct: 63 AKSVARRLGIAHRTIDFTDRFEDAVIKPFVRAYETARTPNPCIDCNRRLKFGSMLERAL- 121 Query: 118 DLGADYIATGHY---VRRADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELE 174 DLG DY+ATGHY VRR D + L+RG D++KDQSY LY+L+ Q+A +L P+G + Sbjct: 122 DLGCDYVATGHYAQIVRRGD---RFALVRGADASKDQSYVLYSLTQYQLAHTLLPLGGMR 178 Query: 175 KPQVRKIAEDLGLVTAKKKDSTGICFIGERKFREFLGRYL--PAQPGKIITVDGDEIGEH 232 K +VR IA + G + A K +S ICFI + + FL RY QPG+I G IG H Sbjct: 179 KSEVRAIAAEQGFINADKPESQDICFIPDGDYVGFLERYSGHTPQPGEIRDEAGAVIGRH 238 Query: 233 QGLMYHTLGQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQL 292 G+ T+GQRKG+GI + P YVV KD ++ LVV L+S G +A Sbjct: 239 SGIESFTVGQRKGIGIAASG-----PLYVVAKDARDHALVVGPKDS---LLSDGCVADDW 290 Query: 293 HWVDREPFTGTMRCTVKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTPGQSAVFYNGE 352 +WV + VKT YRQT P V+ D + +++ P PGQ+ V Y G+ Sbjct: 291 NWVADPEDLASFEVMVKTHYRQTPHPARVERRQDGTVRIVYASPARLAAPGQAVVVYQGD 350 Query: 353 VCLGGGII 360 +GGG + Sbjct: 351 EVIGGGTV 358 >UniRef50_B0TFA7 tRNA-specific 2-thiouridylase mnmA n=97 Tax=Bacteria RepID=MNMA_HELMI Length = 385 Score = 259 bits (663), Expect = 8e-68, Method: Compositional matrix adjust. Identities = 151/375 (40%), Positives = 215/375 (57%), Gaps = 21/375 (5%) Query: 1 MSETAKKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEED---DGEEYCTAAADLAD 57 M ET V+V MSGGVDSSV+A LL +QGY V G+ ++ W +D E C + + + D Sbjct: 1 MKET---VVVAMSGGVDSSVTAALLLEQGYDVIGVTLQIWPKDAPEGAEGGCCSLSAVED 57 Query: 58 AQAVCDKLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAE 117 A+ V KLG+ + +NF + V E F EY AG+TPNP I CN+ IKF+ L+ + Sbjct: 58 AKRVASKLGVPHYVLNFRDYFETEVIEYFGREYLAGQTPNPCIRCNRVIKFEGLLQ-KSL 116 Query: 118 DLGADYIATGHYVR--RADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEK 175 LGA +ATGHY R + G+ RL RG+D+NKDQSY L+ ++ EQ++++LFP+G K Sbjct: 117 ALGAAKVATGHYARIEQDSATGRYRLGRGIDANKDQSYALFNMTQEQLSRTLFPLGGFTK 176 Query: 176 PQVRKIAEDLGLVTAKKKDSTGICFIGERKFREFLGRYLP---AQPGKIITVDGDEIGEH 232 P++R+ A LGL A K DS ICFI + +R FL P QPG + +G+ IG H Sbjct: 177 PEIREKAAQLGLAVASKPDSQEICFIPDNDYRRFLEERYPDHRFQPGPFVDQEGNVIGTH 236 Query: 233 QGLMYHTLGQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQL 292 +GL ++T+GQRKGLG+ P YV+ DVE+N +V+ + L+A L Sbjct: 237 RGLPFYTVGQRKGLGV-----AFGFPAYVIALDVEHNAVVIGPDEA---VKGRRLLADDL 288 Query: 293 HWVDREPFTGTMRCTVKTRYRQTDIPCTVKALDDDRIEVI-FDEPVAAVTPGQSAVFYNG 351 +W+D M K RY + + + D ++ F P A+TPGQ+ VFY G Sbjct: 289 NWIDIAGLKAPMEVEAKIRYSASPAIAVISPVKDGSAVIVEFAAPQRAITPGQAVVFYRG 348 Query: 352 EVCLGGGIIEQRLPL 366 + +GGG I + L L Sbjct: 349 DWVVGGGTIVRNLDL 363 >UniRef50_C0WCT5 Putative uncharacterized protein n=1 Tax=Acidaminococcus sp. D21 RepID=C0WCT5_9FIRM Length = 357 Score = 259 bits (662), Expect = 1e-67, Method: Compositional matrix adjust. Identities = 145/364 (39%), Positives = 201/364 (55%), Gaps = 17/364 (4%) Query: 7 KVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDG---EEYCTAAADLADAQAVCD 63 K ++ MSGGVDSSV+A L+ QGY+ G MK + D + C + D+ DA++V Sbjct: 2 KALIAMSGGVDSSVAAKLMLDQGYECVGCTMKLYNNPDAGCSSKTCCSIRDVEDARSVAV 61 Query: 64 KLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGADY 123 +LG+ N+ E+ +V E F Y G+TPNP I CNK +KF A E A E LG D Sbjct: 62 RLGMPYFVFNYMDEFRRDVMETFARSYTLGKTPNPCIDCNKFLKFGALYERAKE-LGCDT 120 Query: 124 IATGHYVRRADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQVRKIAE 183 I TGHY R +G LLR D KDQSY LY L+ EQ+A + FP+G+ EK R+IAE Sbjct: 121 IVTGHYARIRKRNGCYELLRAKDPKKDQSYVLYNLTQEQLAHTQFPLGDYEKTHTREIAE 180 Query: 184 DLGLVTAKKKDSTGICFIGERKFREFLGRYLP--AQPGKIITVDGDEIGEHQGLMYHTLG 241 + G + + K DS ICF+ + E + R L QPG +T+DG EIG H+G++Y+T+G Sbjct: 181 ESGFINSHKPDSQDICFVPNGTYTEAVQRILSYEPQPGPFLTLDGKEIGTHKGIIYYTIG 240 Query: 242 QRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLHWVDREPFT 301 Q K LG+ + P YV+ D + N ++V L ++ +W+ + Sbjct: 241 QHKKLGL----PQPDGPLYVIAIDPKKNAVIVGPSQA---LFRRDAAVKEANWISGKVPD 293 Query: 302 GTMRCTVKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTPGQSAVFY----NGEVCLGG 357 C VK RYRQ P V D ++FDEP A+TPGQSAV Y +V +GG Sbjct: 294 APFACLVKVRYRQEAQPAIVTPTGSDTFSILFDEPQRAITPGQSAVLYGLGDETDVVIGG 353 Query: 358 GIIE 361 GI++ Sbjct: 354 GILQ 357 >UniRef50_Q4SDW3 Chromosome undetermined SCAF14629, whole genome shotgun sequence. (Fragment) n=2 Tax=Tetraodontidae RepID=Q4SDW3_TETNG Length = 387 Score = 258 bits (660), Expect = 2e-67, Method: Compositional matrix adjust. Identities = 153/392 (39%), Positives = 200/392 (51%), Gaps = 56/392 (14%) Query: 6 KKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYCTAAADLADAQAVCDKL 65 + V+ MSGGVDSSV+A LL+++GY V G+FMKNW+ D C A D DA VC L Sbjct: 5 RHVVCAMSGGVDSSVAALLLKRRGYNVTGVFMKNWDLLDERGVCAAEKDCEDAYRVCQIL 64 Query: 66 GIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGADYIA 125 I H V++ EYW VF L EY+ GRTPNPDILCNK IKF F + A L A Sbjct: 65 DIPFHQVSYVKEYWHKVFSDLLNEYEKGRTPNPDILCNKHIKFNHFYKHAINTLSA---- 120 Query: 126 TGHYVRRADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQVRKIAEDL 185 RL +G D KDQ++FL +S E + Q++FP+ L K V+KIA + Sbjct: 121 --------------RLYKGADHLKDQTFFLSQISQEALRQTIFPLAGLTKSFVKKIAAEA 166 Query: 186 GL-VTAKKKDSTGICFIGERKFREFLGRYLPAQPGKIITV-DGDEIGEHQG--------- 234 G K+K+S GICFIGER F F+ YL +PG ++V DG G H+G Sbjct: 167 GFHHVLKRKESMGICFIGERNFENFILEYLEPKPGNFVSVEDGTVKGAHKGRRVLCVSSD 226 Query: 235 ----LMYH------------TLGQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHE 278 H TLGQR +G G ++ W+VVDKD+ ++VA Sbjct: 227 SCVFTFTHAFVCVPPGWFTLTLGQRARIG------GQKDAWFVVDKDIATGDVLVAPTTN 280 Query: 279 HPRLMSVGLIAQQLHWVDREP-----FTGTMRCTVKTRYRQTDIPCTVKALDDDRIEVIF 333 HP L + + HW+ +P T M C + ++ PCTV D + + Sbjct: 281 HPALYRDTVRTARFHWIAGDPPVELARTQMMECHFRFIHQMPLTPCTVTLNLDGSVWISL 340 Query: 334 DEPVAAVTPGQSAVFYNGEVCLGGGIIEQRLP 365 PV A+TPGQ AV Y G+ CLG G I Q P Sbjct: 341 SHPVRALTPGQYAVLYKGDECLGSGKIIQLGP 372 >UniRef50_C5MCB7 Putative uncharacterized protein n=1 Tax=Candida tropicalis MYA-3404 RepID=C5MCB7_CANTT Length = 426 Score = 258 bits (658), Expect = 3e-67, Method: Compositional matrix adjust. Identities = 136/365 (37%), Positives = 207/365 (56%), Gaps = 14/365 (3%) Query: 8 VIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYCTAAADLADAQAVCDKLGI 67 +IV MS GVDSSV A L Q V G++M NW ++ CT D D Q VC L I Sbjct: 68 IIVAMSSGVDSSVCAALFQNYK-NVHGIYMANWSQNAT---CTER-DWRDVQKVCQDLNI 122 Query: 68 ELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGAD--YIA 125 + VNF EYW++VF + +Y+ G TPNPDI CNK +KF E+ + ++ Sbjct: 123 DCERVNFEHEYWNDVFLPMIEKYERGLTPNPDIGCNKYVKFGKLAEYLEQKYHGKKWWLV 182 Query: 126 TGHYVR--RADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQVRKIAE 183 TGHY R + + G+ LLRGL S KDQSY+L ++ +++++ P+G KP++R++A+ Sbjct: 183 TGHYARVMKHNATGEYHLLRGLSSRKDQSYYLSSIPASILSKTILPIGHYTKPEIRELAK 242 Query: 184 DLGLVTAKKKDSTGICFIG--ERKFREFLGRYLPAQPGKIITVDGDEIGEHQGLMYHTLG 241 L TA K DS G+CF+ + FR+FL Y+PA PG I+T DG G+H+GL + T+G Sbjct: 243 KFNLHTASKPDSQGLCFVNPNQSNFRDFLNEYIPANPGDIVTEDGTVWGKHKGLWHATIG 302 Query: 242 QRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLHWVDREPFT 301 QR + + + W+V +K++E N LV+ +G ++P+L + L W+ + Sbjct: 303 QRSTVSMPQGDPKYQGVWFVSEKNIEKNQLVIVKGTDNPKLFKQVVEITDLEWIQPKEKV 362 Query: 302 GTMRCTVKTRYRQTDIPCTVKALDD--DRIEVIFDEPVAAVTPGQSAVFYNGEVCLGGGI 359 M V+ +Y P VK + + D++ + ++P A+ PGQ + YNG LGGG+ Sbjct: 363 LAMD-NVQFQYHSLTTPVPVKVIKNKGDKLIIELEKPARALAPGQGGILYNGNQVLGGGM 421 Query: 360 IEQRL 364 I + L Sbjct: 422 INKTL 426 >UniRef50_UPI000180C35A PREDICTED: similar to tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase 1 n=1 Tax=Ciona intestinalis RepID=UPI000180C35A Length = 437 Score = 257 bits (656), Expect = 6e-67, Method: Compositional matrix adjust. Identities = 139/376 (36%), Positives = 210/376 (55%), Gaps = 24/376 (6%) Query: 7 KVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYCTAAADLADAQAVCDKLG 66 KVI +SGGVDS+V+A LL+++G V G+FM+NW+ +D C+ D A VC L Sbjct: 3 KVICAISGGVDSAVAALLLKRRGLNVVGVFMRNWDLEDEVGQCSVQEDATYATRVCRALD 62 Query: 67 IELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGADYIAT 126 I + VN EYW NVF + +Y+ G TPNPDILCN+ +KF AF + G IAT Sbjct: 63 IPFYEVNLVKEYWTNVFMPMVDQYEMGNTPNPDILCNQLVKFSAFHNKCSSMFGNVVIAT 122 Query: 127 GHYVRRADVD----------GKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKP 176 GHY R D + RLL+ +D KDQ++FL+ + + +S FP+G + K Sbjct: 123 GHYARTTLNDRVLTAKVPHTAEQRLLKAVDPFKDQTFFLHKVDRTALLRSYFPLGGIFKS 182 Query: 177 QVRKI--AEDLGLVTAKKKDSTGICFIGERKFREFLGRYLPAQPGKIITVD-GDEIGEHQ 233 +V++I A ++ V K+K+S GICFIG R+F F+ Y+ +PG+ I + G+ IG H Sbjct: 183 KVKEIAAASEISFVL-KRKESAGICFIGRREFSNFIKNYISPKPGQFICYETGNVIGNHD 241 Query: 234 GLMYHTLGQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLH 293 G +T+GQR +G G + V+ ++ ++ ++V G HP L L++ H Sbjct: 242 GYFSYTVGQRSLIG------GLRISYAVLHRNSKDGNVLVVPGLNHPALYRKSLVSGPAH 295 Query: 294 WVDREPFT----GTMRCTVKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTPGQSAVFY 349 W+ EP + C + +R + +PCTV L+++R+ +I P+ A+T GQ AV Y Sbjct: 296 WIAGEPALLREGKPLNCYFRFCHRNSLVPCTVHQLENERLLIILQHPLRAMTVGQDAVLY 355 Query: 350 NGEVCLGGGIIEQRLP 365 + CLGG I+ P Sbjct: 356 TEDECLGGAQIDDVGP 371 >UniRef50_C7N321 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase n=1 Tax=Slackia heliotrinireducens DSM 20476 RepID=C7N321_SLAHD Length = 353 Score = 255 bits (652), Expect = 2e-66, Method: Compositional matrix adjust. Identities = 149/366 (40%), Positives = 212/366 (57%), Gaps = 27/366 (7%) Query: 6 KKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEED--------DGEEYCTAAADLAD 57 ++V+VGMSGGVDSSV+A+LL +QGY+V G M ++ DGE + DL D Sbjct: 3 QRVLVGMSGGVDSSVTAYLLLRQGYEVVGATMNLYDPGRLGVPDVRDGE-----SNDLED 57 Query: 58 AQAVCDKLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAE 117 A++V ++LGI H ++F E+ +NV F Y G TPNP I CN+ +KF L+ AA Sbjct: 58 ARSVANRLGIAHHVLDFGCEFENNVVRPFAQAYADGLTPNPCIACNRHLKFGLMLK-AAR 116 Query: 118 DLGADYIATGHYVRRAD-VDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKP 176 +LG D IATGHY R A +DG+ L++GLD KDQ+Y LY ++ +Q+A ++ P+GE K Sbjct: 117 ELGCDGIATGHYARIAQRLDGRFVLMKGLDDAKDQAYVLYHMTQDQLAHTVLPLGEYTKQ 176 Query: 177 QVRKIAEDLGLVTAKKKDSTGICFIGERKFREFLGRY--LPAQPGKIITVDGDEIGEHQG 234 QVR IA + G A+K +S ICF+ + + FL RY L +PG ++ +G +G+H+G Sbjct: 177 QVRAIAAEQGFANARKHESQDICFVPDGDYVGFLERYAGLVPEPGDVLDENGAVLGQHRG 236 Query: 235 LMYHTLGQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLHW 294 + +TLGQRKG+GI T + YV KD+ N + + L++ G +W Sbjct: 237 AIRYTLGQRKGIGIAST-----QALYVTAKDMAANTITMGPADA---LLADGCTVGNWNW 288 Query: 295 VDREPFTGTMRCTVKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTPGQSAVFYNGEVC 354 + P G + VKT YRQ V +D + FDEP PGQSAV Y G+ Sbjct: 289 I--LPDEGPVHAMVKTHYRQKPHGAMVVPQEDGTVRFDFDEPSRLAAPGQSAVAYIGDTV 346 Query: 355 LGGGII 360 LGGGI+ Sbjct: 347 LGGGIV 352 >UniRef50_UPI00016C4B95 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase n=1 Tax=Gemmata obscuriglobus UQM 2246 RepID=UPI00016C4B95 Length = 357 Score = 255 bits (651), Expect = 2e-66, Method: Compositional matrix adjust. Identities = 150/366 (40%), Positives = 213/366 (58%), Gaps = 26/366 (7%) Query: 7 KVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNW--------EEDDGEEYCTAAADLADA 58 +V++ MSGGVDSS SA LL++QG++V GLFM+ E D ++ C +A D DA Sbjct: 3 RVVLAMSGGVDSSASAVLLKKQGHEVIGLFMRTGTHGHDQPDERRDNKKGCCSAIDAGDA 62 Query: 59 QAVCDKLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAED 118 + V DKL I + ++F +E+ + + + F EY GRTPNP ++CN +KF F + Sbjct: 63 RRVADKLDIPFYALDFESEF-NRIIDYFADEYVRGRTPNPCVVCNNWLKFGQLWTFG-QK 120 Query: 119 LGADYIATGHYVRRADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQV 178 LGAD+IATGHY + + L +G+D++KDQSY L+ + E + LFPVG KPQ+ Sbjct: 121 LGADFIATGHYAQVRN----GELHKGVDADKDQSYVLHGIKREVLPHLLFPVGGYTKPQI 176 Query: 179 RKIAEDLGLV-TAKKKDSTGICFIGERKFREFLGRYLP--AQPGKIITVDGDEIGEHQGL 235 R+ A + LV A+K DS ICF+ + + P A G I DG +G+H G+ Sbjct: 177 RQFAREASLVGVAEKPDSVEICFVPSGNHTDVVRARRPGAATAGVIAERDGTVLGDHDGI 236 Query: 236 MYHTLGQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLHWV 295 +T+GQRKGL IGG K+ +V++ E N +VV + L+S GL+A ++W+ Sbjct: 237 DRYTIGQRKGLNIGGGKK-----RFVLELLAETNTVVVG---DESDLLSSGLVASGMNWL 288 Query: 296 DREPFTGTMRCTVKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTPGQSAVFYNGEVCL 355 +P T + C K RYR +P TV AL D EV+FD P AVTPGQ+ Y+G L Sbjct: 289 -IDPPTEPLTCVAKIRYRHAGVPATVTALPDGGAEVVFDAPQPAVTPGQALALYDGTRVL 347 Query: 356 GGGIIE 361 GGG IE Sbjct: 348 GGGWIE 353 >UniRef50_B0DQ81 Predicted protein n=4 Tax=Basidiomycota RepID=B0DQ81_LACBS Length = 370 Score = 255 bits (651), Expect = 2e-66, Method: Compositional matrix adjust. Identities = 141/372 (37%), Positives = 208/372 (55%), Gaps = 28/372 (7%) Query: 12 MSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDD---GEEYCTAAADLADAQAVCDKLGIE 68 MSGGVDSSV+A+LL QQ Y + +FM+NW+ D ++ C D D Q VC KL + Sbjct: 1 MSGGVDSSVAAFLLAQQDYDLSAVFMRNWDTGDESGTDKGCEWEKDWEDVQRVCKKLDLP 60 Query: 69 LHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGAD---YIA 125 ++ + EYW+ VFE L ++++G TPN D+ CN+EIKF A LE ++ +IA Sbjct: 61 CQMIDLSQEYWNRVFEPSLKQWESGVTPNTDVWCNREIKFGALLERLPAPTTSNKKPWIA 120 Query: 126 TGHYVRRA--------DVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQ 177 TGHY R++ + +LLR D KDQ+Y+L ++S E ++++LFP+G L+K + Sbjct: 121 TGHYARKSWSTTPNSPHTRPRPKLLRPSDRGKDQTYYLSSISEEGLSRALFPIGHLQKSE 180 Query: 178 VRKIAEDLGLVTAKKKDSTGICFIGER-KFREFLGRYLPAQPGKII-TVDGDEIGEHQGL 235 VR++A L TA++ DS GICF+GE+ KF FL Y+P PG ++ V G + +H GL Sbjct: 181 VRELARKHQLHTAERPDSVGICFVGEKAKFSNFLSSYIPPNPGPVVDQVSGKTLMQHAGL 240 Query: 236 MYHTLGQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLHWV 295 TLG+ + G +E +V KD +N + V G +H L S L W+ Sbjct: 241 WTFTLGENARI------PGMKERMFVSSKDQLSNTIYVVPGSDHEDLYSNTLRVSDFTWI 294 Query: 296 DREPFTGTM------RCTVKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTPGQSAVFY 349 + + R + RYR +P TV+ + + V DEP AVTPGQ A Y Sbjct: 295 WNDAIPPDLSTPQGFRVDLMHRYRMHSVPSTVRKAETGDLIVTADEPEKAVTPGQIAALY 354 Query: 350 NGEVCLGGGIIE 361 +G+ CLG G+I+ Sbjct: 355 DGDWCLGCGVIK 366 >UniRef50_A6BB58 3-oxoacyl-[acyl-carrier-protein] synthase 1 (Fragment) n=1 Tax=Vibrio parahaemolyticus AQ3810 RepID=A6BB58_VIBPA Length = 331 Score = 254 bits (650), Expect = 2e-66, Method: Compositional matrix adjust. Identities = 123/154 (79%), Positives = 137/154 (88%), Gaps = 2/154 (1%) Query: 97 NPDILCNKEIKFKAFLEFAAEDLGADYIATGHYVRRADVDG--KSRLLRGLDSNKDQSYF 154 NPDILCNKEIKFKAFLEFA E L ADYIA GHYVRR+ + K ++LRGLDSNKDQSYF Sbjct: 1 NPDILCNKEIKFKAFLEFADEVLEADYIAMGHYVRRSFPENGEKPQMLRGLDSNKDQSYF 60 Query: 155 LYTLSHEQIAQSLFPVGELEKPQVRKIAEDLGLVTAKKKDSTGICFIGERKFREFLGRYL 214 LYTLSHEQ+A+SLFPVG+LEKP+VR+IAE+ GL+TAKKKDSTGICFIGERKF EFLGRYL Sbjct: 61 LYTLSHEQVARSLFPVGDLEKPEVRRIAEEQGLITAKKKDSTGICFIGERKFTEFLGRYL 120 Query: 215 PAQPGKIITVDGDEIGEHQGLMYHTLGQRKGLGI 248 PAQPG I T +G+ IG+HQGLMYHTLGQRKGL I Sbjct: 121 PAQPGNIETPEGEVIGQHQGLMYHTLGQRKGLHI 154 >UniRef50_B5YCZ9 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase n=2 Tax=Dictyoglomus RepID=B5YCZ9_DICT6 Length = 345 Score = 253 bits (645), Expect = 1e-65, Method: Compositional matrix adjust. Identities = 147/359 (40%), Positives = 211/359 (58%), Gaps = 21/359 (5%) Query: 7 KVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYCTAAADLADAQAVCDKLG 66 KV VGMSGGVDSS +A+LL+++GY+V GL M D + DA+ + L Sbjct: 4 KVAVGMSGGVDSSTTAYLLKKEGYEVIGLTMNIAYSDS----------IKDAEKIAKYLN 53 Query: 67 IELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGADYIAT 126 I V+ E+ + + + F+ YK+G TPNP CN+ IKF L+ A++LGA+Y+AT Sbjct: 54 IPHFYVDLRKEFEEQIIKYFIDSYKSGYTPNPCTFCNRIIKFGLLLK-KAQELGAEYLAT 112 Query: 127 GHYVRRA-DVDGKSRLL-RGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQVRKIAED 184 GHYVR+ D + K LL R D KDQSYFL L+ EQI +SLFP+G+L K +VRK+AE+ Sbjct: 113 GHYVRKVWDEEKKVFLLKRAKDLKKDQSYFLAYLTQEQIEKSLFPLGDLTKNEVRKLAEE 172 Query: 185 LGLVTAKKKDSTGICFIGERKFREFLGRYLPAQPGKIITVDGDEIGEHQGLMYHTLGQRK 244 +GL + K++S ICF+ +R +R+FL RYL + GKIIT DG E+G H G+ T+GQR+ Sbjct: 173 IGLFVSDKEESQDICFLPDRDYRKFLSRYLVEKKGKIITEDGVEVGYHDGVFSFTIGQRR 232 Query: 245 GLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLHWVDREPFTGTM 304 GL + K P YV E I+VVA + ++ S + A+ +++ P + Sbjct: 233 GLRVALGK-----PVYVKKIIPEEGIVVVA---DREKIFSREVYAKNVNYPSGMPREKEL 284 Query: 305 RCTVKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTPGQSAVFYNGEVCLGGGIIEQR 363 RY P +K L + I + F+EP A+TPGQ V Y + L GG+IE++ Sbjct: 285 EVKAMIRYNMEPQPALLKILSEKEIYLTFEEPQWAITPGQILVCYKDDYVLCGGVIEEK 343 >UniRef50_A8X0Z8 Putative uncharacterized protein n=2 Tax=Caenorhabditis briggsae RepID=A8X0Z8_CAEBR Length = 393 Score = 252 bits (644), Expect = 1e-65, Method: Compositional matrix adjust. Identities = 149/387 (38%), Positives = 218/387 (56%), Gaps = 38/387 (9%) Query: 7 KVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMK----------------NWE-EDDGEEYC 49 +V++GMSGGVDS+VSA+LL+Q+G+ V GL M NW+ +++G C Sbjct: 5 RVVIGMSGGVDSAVSAFLLKQKGFDVVGLHMVTHSRQRESEKKNISQINWDSQEEGSSTC 64 Query: 50 TAAADLADAQAVCDKLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFK 109 + D ADA+ VC++L I HTVNF EYW++VF FL YK GRT PDI CN IKF Sbjct: 65 PRSKDEADARNVCNRLNIPFHTVNFVKEYWNHVFLKFLENYKIGRTTVPDIDCNYSIKFD 124 Query: 110 AFLEFAAEDLGADYIATGHYVRRADVDGKS--------RLLRGLDSNKDQSYFLYTLSHE 161 AF + A E AD+IATGHY + D + RL G D KDQ++FL T++ E Sbjct: 125 AFHKVAQETFDADFIATGHYATTSFGDFQQNRKHSEAIRLFSGRDPLKDQTFFLCTVTQE 184 Query: 162 QIAQSLFPVGELEKPQVRKIAEDLGL-VTAKKKDSTGICFIGERK-FREFLGRYLPAQPG 219 Q+ +++FP+G L+K +V++IAE G KK +S GICFIG++K F +FL Y+ +PG Sbjct: 185 QLKRAMFPLGSLQKSEVKRIAEQQGFHRVVKKPESMGICFIGKKKRFSDFLDEYIEPKPG 244 Query: 220 KIITVDGDEIGEHQGLMYHTLGQRKGLGIGGT--KEGTEEPWYVVDKDVENNILVVAQGH 277 +I+ DG +IG+H G+ T+G+R I G E + ++V + + +V G Sbjct: 245 RIVLKDGKQIGKHHGIHQFTIGKR----IHGKYLNERSHFGFFVSEIRSDTGDVVACNGS 300 Query: 278 EHPRLMSVGLIAQQLHWV-DREPFTGTMRCTVKTRYRQTD--IPCTVKALDDDRIEVIFD 334 H L + + + +W+ +P + R ++T +PC V+ + + V Sbjct: 301 HHSDLYATRFLINRPNWIPSSDPLEEISPSKILCRIQRTHPPVPCKVEK-SEHYLSVEPK 359 Query: 335 EPVAAVTPGQSAVFYNGEV-CLGGGII 360 P+ A +PGQ VFY E CLGGG I Sbjct: 360 IPLRATSPGQMCVFYTTENECLGGGEI 386 >UniRef50_D1BMF0 tRNA(5-methylaminomethyl-2-thiouridylate)-methyl transferase n=3 Tax=Veillonella RepID=D1BMF0_VEIPT Length = 353 Score = 252 bits (644), Expect = 1e-65, Method: Compositional matrix adjust. Identities = 141/361 (39%), Positives = 210/361 (58%), Gaps = 16/361 (4%) Query: 6 KKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYCTAAADLADAQAVCDKL 65 K + V MSGGVDSS++A +L +QGY+V G+ + W G Y + DA+ +CD L Sbjct: 3 KVIAVAMSGGVDSSLTAAMLLKQGYKVFGITL--WLWVSGTPYDEVPLAVTDAKKMCDFL 60 Query: 66 GIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGADYIA 125 GIE H ++ +++NV + F+ EY GRTPNP + CNK IKF L A E LGA ++ Sbjct: 61 GIEHHVIDARDVFYENVVDYFVKEYAYGRTPNPCVFCNKNIKFDLMLNRALE-LGATHMV 119 Query: 126 TGHY--VRRADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQVRKIAE 183 TGHY V + G L +G+D KDQSY +Y ++ ++ +FP+G K + RK+A Sbjct: 120 TGHYAQVNYNEETGLYELHKGVDPTKDQSYVMYNMNQRILSHLMFPLGGQCKTETRKLAA 179 Query: 184 DLGLVTAKKKDSTGICFIGERKFREFLGRYLPAQP--GKIITVDGDEIGEHQGLMYHTLG 241 + L AKK DS ICF+ +++ + + +P G I+T DG+ +G+H GL +T+G Sbjct: 180 EYDLPVAKKPDSVDICFLPHGNYQKLVVEEMKGKPESGNIVTEDGEVLGKHNGLFNYTIG 239 Query: 242 QRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLHWVDREPFT 301 QRKGLGI + P YV+ + + N ++V RL + +I + +++D + Sbjct: 240 QRKGLGIA-----YKHPLYVIGFNGDRNEVIVGPNE---RLFTNRMICKFYNFLD-DTIH 290 Query: 302 GTMRCTVKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTPGQSAVFYNGEVCLGGGIIE 361 ++ K RY PCT + LDDD +EVIF+EP A+TPGQS FYNG LGG +I+ Sbjct: 291 KELKAEGKIRYAANPSPCTARILDDDTMEVIFEEPQRAITPGQSVAFYNGTQLLGGAVID 350 Query: 362 Q 362 + Sbjct: 351 R 351 >UniRef50_B9CP36 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase n=1 Tax=Atopobium rimae ATCC 49626 RepID=B9CP36_9ACTN Length = 389 Score = 250 bits (638), Expect = 6e-65, Method: Compositional matrix adjust. Identities = 150/387 (38%), Positives = 207/387 (53%), Gaps = 33/387 (8%) Query: 1 MSETAKKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYCTAAADLADAQA 60 M + KV +GMSGGVDS++SA LL +QG+ V ++M+NW +D +C A DLADA+ Sbjct: 1 METSMDKVYLGMSGGVDSALSAALLLEQGFDVHAVYMRNWSKDLPGFHCPWADDLADAER 60 Query: 61 VCDKLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLG 120 V LGI+L + EY + V + L Y G TPNPD++CN+ +KF F + A + G Sbjct: 61 VAVSLGIDLAVWDCEKEYKETVVDYLLDSYAHGYTPNPDVMCNQTVKFGTFAKRAFSE-G 119 Query: 121 ADYIATGHYVRRADVD----------------------GKSRLLRGLDSNKDQSYFLYTL 158 ADYIATGHY R A + G S L+R D +KDQ+YFL+ + Sbjct: 120 ADYIATGHYARLASGEKNACGGDDANNTTGMAGAMHGSGTSCLMRAADEHKDQTYFLWRV 179 Query: 159 SHEQIAQSLFPVGEL-EKPQVRKIAEDLGLVTAKKKDSTGICFIGERKFREFLGRYLPAQ 217 E +++FP+G++ K +VR + D GL K DS GICFIG R FL + Sbjct: 180 PSEIFDRTIFPIGDIPTKAEVRAMCADRGLGIENKPDSDGICFIGPVGLRTFLLDAFERK 239 Query: 218 PGKIITVD-GDEIGEHQGLMYHTLGQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQG 276 G II + G ++GEH G T+GQRKGL +GG YVV D N + V Sbjct: 240 TGDIIEWESGKKLGEHDGAFLFTIGQRKGLSVGGGPAH-----YVVATDTNTNTVYVTSD 294 Query: 277 HEHPRLMSVGLIAQQLHWVDR-EPFTGTMRCTVKTRYRQTDIPCTVKALDDDRIEVIFDE 335 L + + HW+ P G TV+TR+ PC + + + + ++ Sbjct: 295 PLSAALWTKTMDIVDTHWISGCVPADGAY--TVRTRHTGELRPCMLTKVSATTMRITYEV 352 Query: 336 PVAAVTPGQSAVFYNGEVCLGGGIIEQ 362 PV V PGQSAVFY+G VC+GGGIIE+ Sbjct: 353 PVRTVAPGQSAVFYDGLVCIGGGIIER 379 >UniRef50_C0QG63 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QG63_DESAH Length = 365 Score = 249 bits (636), Expect = 1e-64, Method: Compositional matrix adjust. Identities = 143/356 (40%), Positives = 211/356 (59%), Gaps = 26/356 (7%) Query: 10 VGMSGGVDSSVSAWLLQQQGYQVEGL-FMKNWEEDDGEEYCTAAADLADAQAVCDKLGIE 68 + MSGG+DS V+A +L++QG+ + G+ F +E + A DL+ ++ D+L I+ Sbjct: 32 IAMSGGIDSLVAAHVLKRQGHDLVGIHFTTGFESE--------AVDLS---SIEDQLDIK 80 Query: 69 LHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGADYIATGH 128 +H ++ +AE+ V + F+ Y G+TPNP ++CN+ IKF L A+ LGA+ IATGH Sbjct: 81 IHQMDLSAEFNRAVVDYFVKTYARGKTPNPCVVCNRTIKF-GVLAQRAKTLGAEKIATGH 139 Query: 129 YV-RRADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQVRKIAEDLGL 187 Y R +G L++G+D KDQSYFL LS EQ+ Q++FP+G + K QVR IA D L Sbjct: 140 YAGTRTRSNGGIALVKGVDGVKDQSYFLAMLSQEQLKQAVFPLGRMTKEQVRNIARDNRL 199 Query: 188 VTAKKKDSTGICFIGERKFREFLGRYL--PAQPGKIITVDGDEIGEHQGLMYHTLGQRKG 245 + ++K+S ICFI F F+ L P PG I+ DG +G H+GL +T+GQR+G Sbjct: 200 MPVEEKESQDICFIKAPGFSGFVAARLSTPPSPGDIVLTDGTVVGRHRGLHRYTIGQRRG 259 Query: 246 LGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLHWVDREPFTGTMR 305 L G EP+YV D+ENN+LVV E L ++ + L+W+ P +++ Sbjct: 260 LNSPG-----PEPYYVKTIDMENNLLVVGGKKE---LYTIKVAVGDLNWIT-PPLASSLK 310 Query: 306 CTVKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTPGQSAVFYNGEVCLGGGIIE 361 T K RY T+ ++++DR ++FD P AVTPGQ AVFY E LG GII+ Sbjct: 311 VTTKIRYSHKGAASTL-SIENDRTTLVFDAPQLAVTPGQVAVFYRDEEVLGAGIIQ 365 >UniRef50_B9WA49 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase, putative n=3 Tax=Saccharomycetales RepID=B9WA49_CANDC Length = 424 Score = 248 bits (634), Expect = 2e-64, Method: Compositional matrix adjust. Identities = 144/367 (39%), Positives = 207/367 (56%), Gaps = 16/367 (4%) Query: 8 VIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYCTAAADLADAQAVCDKLGI 67 +IV MS GVDSSV A L + V GL+M NW + CT D D Q VC LGI Sbjct: 64 IIVAMSSGVDSSVCAALFKDYP-NVHGLYMANWSQ---SATCTER-DWKDVQRVCRDLGI 118 Query: 68 E-LHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDL-GADY-I 124 VNF EYW +VF + +Y+ G TPNPDI CNK +KF +++ E G D+ + Sbjct: 119 SSCERVNFEHEYWHDVFVPMIEKYEKGLTPNPDIGCNKFVKFGKLIDYLHEKYDGKDWWL 178 Query: 125 ATGHYVR--RADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQVRKIA 182 TGHY R + + G+ LLRGL KDQSY+L ++ +++ L P+G KPQ+RK+A Sbjct: 179 VTGHYARIMKHNETGEYHLLRGLSQRKDQSYYLSSIPPRSLSKILLPIGHYIKPQIRKLA 238 Query: 183 ED-LGLVTAKKKDSTGICFIGERK--FREFLGRYLPAQPGKIITVDGDEIGEHQGLMYHT 239 D L TA K DS G+CF+ ++ FREFL Y+P PG I+T DG G H+GL + T Sbjct: 239 HDRFQLHTATKPDSQGLCFVNPQQSNFREFLNDYIPENPGDIVTEDGKVWGRHKGLWHAT 298 Query: 240 LGQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLHWVDREP 299 +GQ+ + + + W+V DK+ E N +++ +GH++PRL + QL W+ + Sbjct: 299 IGQKSSVCMPQADPKYQGIWFVSDKNYEKNQIIIVKGHDNPRLFKQTVELTQLEWLCPKE 358 Query: 300 FTGTMRCTVKTRYRQTDIPCTVKALDD--DRIEVIFDEPVAAVTPGQSAVFYNGEVCLGG 357 +R ++ +Y VK + D D++ V + PV A+ PGQ+ V YNG LGG Sbjct: 359 EVIHLR-GLQFQYHSLSKSIPVKRVIDSGDKLVVELETPVRALAPGQAGVLYNGNRVLGG 417 Query: 358 GIIEQRL 364 G+I + + Sbjct: 418 GMISRTM 424 >UniRef50_A1BI85 tRNA-specific 2-thiouridylase mnmA n=2 Tax=Chlorobiaceae RepID=MNMA_CHLPD Length = 357 Score = 248 bits (633), Expect = 2e-64, Method: Compositional matrix adjust. Identities = 146/370 (39%), Positives = 212/370 (57%), Gaps = 28/370 (7%) Query: 1 MSETAKKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYCTAA----ADLA 56 M+ET V+VG+SGGVDS+V+A LL +QGY+V GL ++ + D + +D A Sbjct: 1 MTET---VVVGISGGVDSAVAACLLMKQGYRVLGLNIRILDTPDEHPSLAPSPLLISDHA 57 Query: 57 DAQAVCDKLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAA 116 D Q + ++N +A + V F A+Y AG+TPNP ++CNK+IK+ LE A Sbjct: 58 DYQ-------FPVFSLNLSARFSQEVIRYFQADYLAGKTPNPCMVCNKKIKWHGLLE-GA 109 Query: 117 EDLGADYIATGHYVRRADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKP 176 LGA+ IATGHY R A +DG+ RL +GLD KDQSYFL+ LS + ++ FP+GEL K Sbjct: 110 RLLGAERIATGHYARTASLDGRVRLYKGLDPQKDQSYFLWMLSQNDLNKTCFPLGELAKE 169 Query: 177 QVRKIAEDLGLVTAKKKDSTGICFIGERKFREFLGRYLPAQP-----GKIITVDGDEIGE 231 +VR++A G+ A+KK+S ICF+ + +L +P G I+ +G +G+ Sbjct: 170 KVRELARTFGVRAAEKKESQEICFVPHDDYCRYLELAVPGLKEKVAGGDIVDENGKVLGK 229 Query: 232 HQGLMYHTLGQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQ 291 H+G ++T+GQR+GLG+ T EP YV D ENN V G++ L + L Sbjct: 230 HRGYPFYTIGQRRGLGLSST-----EPLYVTALDQENN--CVHTGNKS-SLDTRSLTVSG 281 Query: 292 LHWVDREPFTGTMRCTVKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTPGQSAVFYNG 351 L+W++ + + K RYR + PCT+ L D + + F AV PGQ+AVFY+ Sbjct: 282 LNWINNKSLDEPVEAFGKIRYRDRETPCTIAPLPDGQATITFHTAKHAVAPGQAAVFYHD 341 Query: 352 EVCLGGGIIE 361 E LGGG I Sbjct: 342 EEVLGGGFIS 351 >UniRef50_B7J5X6 tRNA-specific 2-thiouridylase mnmA n=3 Tax=Acidithiobacillus RepID=MNMA_ACIF2 Length = 352 Score = 247 bits (631), Expect = 4e-64, Method: Compositional matrix adjust. Identities = 144/360 (40%), Positives = 205/360 (56%), Gaps = 18/360 (5%) Query: 6 KKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYCTAAADLADAQAVCDKL 65 KK ++ +SGGVDS+V+A L+Q QGY++ G+ M+ W C D+ DA +C +L Sbjct: 4 KKALIALSGGVDSAVAALLMQGQGYELTGVTMRLWPR----SRCCDEKDIEDAAEICARL 59 Query: 66 GIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGADYIA 125 GI +++ + V ++F+AEY+AGRTPNP CN+ +KF A L E LGA +A Sbjct: 60 GIPYTVLDYREAFRRQVVDVFVAEYQAGRTPNPCARCNQFLKFDALLA-EGEKLGATMLA 118 Query: 126 TGHYVRRADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQVRKIAEDL 185 TGHY R A+ + LLRG D KDQSYFL+ + +++ FPVG + K +VR +A Sbjct: 119 TGHYARLAETSSGTALLRGRDHAKDQSYFLFAIGAGILSRLRFPVGGMNKDEVRAMARKH 178 Query: 186 GLVTAKKKDSTGICFIGERKFREFLGRYLP---AQPGKIITVDGDEIGEHQGLMYHTLGQ 242 GL A K+DS ICF+ + +R FL Y AQ G+++ G +G H G ++ T+GQ Sbjct: 179 GLPVAAKQDSQDICFVPDGDYRRFLEDYAGLDMAQEGEMVDSSGQVLGHHPGTLHFTVGQ 238 Query: 243 RKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIA-QQLHWVDREPFT 301 RKGLG G+++P YV+ D N ++V E R G+++ + +W+ Sbjct: 239 RKGLG-----GGSDQPRYVLALDPAQNRVIVGGEDELYR----GVVSLAECNWLTDLSPG 289 Query: 302 GTMRCTVKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTPGQSAVFYNGEVCLGGGIIE 361 T TVK RYR + L D R E+ F EP AVTPGQ+AV Y GE LGGG I+ Sbjct: 290 ETHAVTVKLRYRSRAESAMLHLLSDARAELRFREPQRAVTPGQAAVCYQGERLLGGGWIQ 349 >UniRef50_A5UV64 tRNA-specific 2-thiouridylase mnmA n=7 Tax=Bacteria RepID=MNMA_ROSS1 Length = 373 Score = 246 bits (629), Expect = 7e-64, Method: Compositional matrix adjust. Identities = 150/379 (39%), Positives = 206/379 (54%), Gaps = 32/379 (8%) Query: 7 KVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDD---GEEYCTAAADLADAQAVCD 63 K++V MSGGVDSS++A LL + G+ V G+ + WE DD E C + A+ VC Sbjct: 3 KIMVAMSGGVDSSLAAALLHEAGHDVTGVTLHLWEGDDDRLAESLCCSQEMTESARRVCA 62 Query: 64 KLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGADY 123 +LGI + N+ E+ V E FL EY +G TPNP + CN+EIKF+A L A LG DY Sbjct: 63 QLGIPYYVFNYQREFRRYVIEYFLREYASGFTPNPCLECNREIKFRALLA-RARTLGFDY 121 Query: 124 IATGHYVR-RADVDGKS-----------------RLLRGLDSNKDQSYFLYTLSHEQIAQ 165 +ATGHY R RAD + RLLR +D KDQSY LY L + +A+ Sbjct: 122 VATGHYARIRADETRHNGEDAGLPPAERAQRTTYRLLRAVDREKDQSYMLYMLGQDDLAR 181 Query: 166 SLFPVGELEKPQVRKIAEDLGLVTAKKKDSTGICFIGERKFREFLGRYLP--AQPGKIIT 223 +FP+GE K +VR +A GL +A + +S ICF+ +R L P +PG I+ Sbjct: 182 LIFPIGEYTKAEVRAMAAARGLASANRPESQDICFVPGGDYRNLLREERPDALRPGPILD 241 Query: 224 VDGDEIGEHQGLMYHTLGQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLM 283 ++G E+G HQGL +T+GQR+GLGI T +P YV DV N ++V G E L Sbjct: 242 LEGREVGRHQGLPLYTIGQRRGLGI-----ATGQPMYVTALDVARNAVIV--GPESA-LR 293 Query: 284 SVGLIAQQLHWVDREPFTGTMRCTVKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTPG 343 L A+ + +V C + R +P V + ++V F P AVTPG Sbjct: 294 RESLRAEWVTFVSGMWPEAPFDCLAQIRAHADAVPARVIPGEAGTVDVHFSRPQRAVTPG 353 Query: 344 QSAVFYNGEVCLGGGIIEQ 362 Q+ VFY+G+V LGGG I + Sbjct: 354 QAIVFYDGDVVLGGGRIAR 372 >UniRef50_B5YGH6 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase n=1 Tax=Thermodesulfovibrio yellowstonii DSM 11347 RepID=B5YGH6_THEYD Length = 342 Score = 244 bits (624), Expect = 3e-63, Method: Compositional matrix adjust. Identities = 135/360 (37%), Positives = 214/360 (59%), Gaps = 29/360 (8%) Query: 7 KVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYCTAAADLADAQAVCDKLG 66 KV++ MSGG+DSSV+A+LL+++G VEG+F ++E A++ A+ + L Sbjct: 3 KVLLAMSGGIDSSVAAYLLREKGMAVEGVFFILFDE---------PANIELAKQTANFLN 53 Query: 67 IELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGADYIAT 126 I+LH + ++ +V F YK G TPNP ++CNK+IKF L+F AE + A+YIAT Sbjct: 54 IKLHIEDLREKFKADVITPFFEGYKKGITPNPCVICNKKIKF-PLLKFLAEKVKANYIAT 112 Query: 127 GHYVRRADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQVRKIAEDLG 186 GHY R ++ L++G+D KDQSYFLY + ++ +FP+GE K ++R+IAE +G Sbjct: 113 GHYARIVRINNIPLLMKGIDPKKDQSYFLYGIERTLLSHIIFPLGEYTKYKIREIAEKVG 172 Query: 187 LVTAKKKDSTGICFIGERKFREFLGRYLPAQPGKIITVD-GDEIGEHQGLMYHTLGQRKG 245 + + ++ST +CF+ ++++ E + P + G II + G IG+H+G+ +T+GQRK Sbjct: 173 IPSKVAEESTEVCFLRDKRYYESIR---PTKGGPIIEMSTGKIIGQHRGIHLYTIGQRKR 229 Query: 246 LGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLHW---VDREPFTG 302 LGI + P YVV + N + V + + +L+W +++E F+ Sbjct: 230 LGI-----ASPHPLYVVKIEPSENAVYVDSKE---KAFMREFVVNELNWLCDIEKEEFS- 280 Query: 303 TMRCTVKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTPGQSAVFYNGEVCLGGGIIEQ 362 C VK RY TV ++ DR V+F++P A TPGQSAVFYNG++ LGGG+I++ Sbjct: 281 ---CQVKIRYAMNPEKATVTLINKDRANVVFEKPQFAPTPGQSAVFYNGDIVLGGGVIKE 337 >UniRef50_Q8R5X3 tRNA-specific 2-thiouridylase mnmA 1 n=16 Tax=Fusobacterium RepID=MNMA1_FUSNN Length = 362 Score = 244 bits (624), Expect = 3e-63, Method: Compositional matrix adjust. Identities = 146/364 (40%), Positives = 214/364 (58%), Gaps = 34/364 (9%) Query: 7 KVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYCTAAADLADAQAVCDKLG 66 +V V MSGGVDSS A+LL+QQGY + G+ MK ++++D +DA+ VCD LG Sbjct: 25 RVGVAMSGGVDSSTVAYLLKQQGYDIFGVTMKTFKDED-----------SDAKKVCDDLG 73 Query: 67 IELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGADYIAT 126 IE + ++ E+ + V + F+ EY GRTPNP ++CN+ IKF L+F A ++AT Sbjct: 74 IEHYILDVRDEFKEKVVDYFVNEYMNGRTPNPCMVCNRYIKFGKMLDFILSK-DASFMAT 132 Query: 127 GHYVRRADVDGKSRLLR-GLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQVRKIAEDL 185 GHY + K+ LL G DSNKDQ YFL + ++++ +FPVG+LEK ++R++AE L Sbjct: 133 GHYTKL-----KNGLLSVGDDSNKDQVYFLSQIEKNKLSKIIFPVGDLEKTKLRELAEQL 187 Query: 186 GLVTAKKKDSTGICFIGERKFREFL---GRYLPAQPGKIITVDGDEIGEHQGLMYHTLGQ 242 G+ KKDS ICF+ + K ++FL + +PG I+ +G+ +G+H+G ++T+GQ Sbjct: 188 GVRVYSKKDSQEICFVDDGKLKQFLIENTKGKAEKPGNIVDKNGNILGKHKGFSFYTIGQ 247 Query: 243 RKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLHWVDREPFTG 302 RKGLGI +EEP YV+ D + N ++V Q + L LIA +L+ G Sbjct: 248 RKGLGI-----SSEEPLYVLAFDRKTNNIIVGQNED---LFRDELIATRLNLFSVSSLEG 299 Query: 303 --TMRCTVKTRYRQTDIPCTVKALDDDRIEVIF-DEPVAAVTPGQSAVFYNGE-VCLGGG 358 + C KTR R C +K D D +V F D V A+TPGQ VFYN + + GG Sbjct: 300 LDNLECFAKTRSRDILHKCLLKK-DGDNFQVKFIDNKVRAITPGQGIVFYNNDGNVIAGG 358 Query: 359 IIEQ 362 IE+ Sbjct: 359 FIEK 362 >UniRef50_Q0SMH1 tRNA-specific 2-thiouridylase mnmA n=25 Tax=Bacteria RepID=MNMA_BORAP Length = 355 Score = 243 bits (619), Expect = 9e-63, Method: Compositional matrix adjust. Identities = 127/358 (35%), Positives = 200/358 (55%), Gaps = 13/358 (3%) Query: 7 KVIVGMSGGVDSSVSAWLLQQQGY-QVEGLFMKNWEEDDGEEY--CTAAADLADAQAVCD 63 K+ V +SGGVDSSV+ + + +GY ++ ++K W ED+ C DL +AVC Sbjct: 2 KIAVLLSGGVDSSVALYRIINKGYTSIKCYYLKIWLEDELSYIGSCPWQEDLNYVEAVCS 61 Query: 64 KLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGADY 123 K + +NF EY++ V + E K G TP+PDI CN+ IKF AF E E D Sbjct: 62 KFNVPYEIINFQKEYYNKVVSYTIKELKNGNTPSPDIFCNQRIKFGAFFEKINEQY--DL 119 Query: 124 IATGHYVRRADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQVRKIAE 183 + TGHY + D K L + D KDQSYFL LS +Q+++ FP+G L K +VR+IA+ Sbjct: 120 VVTGHYAKIQTKDKKFFLKQAKDKIKDQSYFLSHLSQKQMSKLYFPLGTLLKSEVRQIAK 179 Query: 184 DLGLVTAKKKDSTGICFIGERKFREFLGRYLPAQPGKIITVD-GDEIGEHQGLMYHTLGQ 242 ++ L +KDS GICF+G+ K+ EF+ +L + G II + G IG H G + T+GQ Sbjct: 180 NINLPNKNRKDSQGICFLGKIKYNEFIKYHLGEKKGNIIEKETGKIIGTHNGYWFFTVGQ 239 Query: 243 RKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLHWVDREPFTG 302 R+G+ + + PW+V++KD+E NI+ ++ + + + ++HW++ P + Sbjct: 240 RRGIKL------SNGPWFVIEKDLEKNIIYISHNENYSKQAKRKFLVHEIHWINGTP-SD 292 Query: 303 TMRCTVKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTPGQSAVFYNGEVCLGGGII 360 +K R+ + C +K + + IE+ ++ ++PGQ A+FY CLGG I Sbjct: 293 FENFKIKIRHGEKKYSCKLKLIAKNLIEISLNKKDYGISPGQFAIFYKNTECLGGAKI 350 >UniRef50_B9GF12 Predicted protein n=6 Tax=Viridiplantae RepID=B9GF12_POPTR Length = 434 Score = 242 bits (618), Expect = 1e-62, Method: Compositional matrix adjust. Identities = 139/372 (37%), Positives = 205/372 (55%), Gaps = 29/372 (7%) Query: 7 KVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEY---CTAAADLADAQAVCD 63 ++ V +SGGVDSSV+ LL G+ ++K W ++D + C DL A+ VCD Sbjct: 9 RIAVLLSGGVDSSVALRLLHAAGHHCTAFYLKIWFQEDFNNFWSECPWEEDLKFAKGVCD 68 Query: 64 KLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGADY 123 ++G+ L V+ EYW NV + EY+ GRTPNPD+LCN IKF AF++ A ++ DY Sbjct: 69 QVGVPLEVVHLTDEYWSNVVSYIIEEYRCGRTPNPDVLCNTRIKFGAFMD-AINNMEFDY 127 Query: 124 IATGHYVR-----RADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQV 178 +A+GHY ++ S L D KDQ+YFL L+ Q+ + +FP+G + K +V Sbjct: 128 VASGHYAHVIHPVSDQINKPSVLELSKDKLKDQTYFLSHLTQAQLKRLIFPLGCIPKEEV 187 Query: 179 RKIAEDLGLVTAKKKDSTGICFIGERKFREFLGRYLPAQPGKIITVD-GDEIGEHQGLMY 237 R +A L +KDS GICF+G+ KF EF+GR++ G I+ + GD +G H+G + Sbjct: 188 RNLASKFDLPNKDRKDSQGICFLGKIKFSEFVGRHIGESEGVILEAETGDFLGIHRGFWF 247 Query: 238 HTLGQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGH----EHPRLMSVGLIAQQLH 293 +T+GQR+GL + G PWYVV+KDV+NN++ V++ + + R VG L Sbjct: 248 YTIGQRQGLRLPGG------PWYVVEKDVKNNVVFVSRNYFSLDKRRRSFRVG----SLK 297 Query: 294 WVDREPFTGTMRCTVKTRYRQTDIPCTVKA-LDDDRIE----VIFDEPVAAVTPGQSAVF 348 W+ P T + K R+ T C+VK L +D E V E + GQ F Sbjct: 298 WLSGSPTDMTTQLQCKVRHGPTFYDCSVKIELGEDSPEEVVAVHLCEDDQGLAAGQFTAF 357 Query: 349 YNGEVCLGGGII 360 Y G C+G G+I Sbjct: 358 YQGRTCIGSGVI 369 >UniRef50_C8W7A2 tRNA(5-methylaminomethyl-2-thiouridylate)-methyl transferase n=2 Tax=Atopobium RepID=C8W7A2_ATOPD Length = 361 Score = 242 bits (618), Expect = 1e-62, Method: Compositional matrix adjust. Identities = 146/356 (41%), Positives = 203/356 (57%), Gaps = 11/356 (3%) Query: 8 VIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYCTAAADLADAQAVCDKLGI 67 V +GMSGGVDS++SA LL + GY V+ ++M+NW +D C A DLADA+ VC LGI Sbjct: 5 VYLGMSGGVDSALSAALLLEAGYNVKAIYMRNWSKDLPGFKCPWADDLADAERVCVTLGI 64 Query: 68 ELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGADYIATG 127 +L + AEY V + L Y+ GRTPNPD++CN+ +KF F E A + GA+++ATG Sbjct: 65 DLDVWDCEAEYKATVVDYLLDAYEHGRTPNPDVMCNQTVKFGTFAERAFAE-GANFVATG 123 Query: 128 HYVRRADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGEL-EKPQVRKIAEDLG 186 HY + +V G +LLR D++KDQ+YFL+ + ++LFP+G + K +VR + + G Sbjct: 124 HYAQ--NVPGTKKLLRAADAHKDQTYFLWRVPGHLFERTLFPIGHIATKAEVRSMCAERG 181 Query: 187 LVTAKKKDSTGICFIGERKFREFLGRYLPAQPGKIITVD-GDEIGEHQGLMYHTLGQRKG 245 L K DS GICFIG R FL + G +I + G +G H G T+GQRKG Sbjct: 182 LGIETKPDSDGICFIGPVGLRTFLLDTFQKKQGDVIEWETGKILGTHDGAFLFTVGQRKG 241 Query: 246 LGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLHWVDREPFTGTMR 305 L IGG YVV D N++ V P L + + +HW+ EP R Sbjct: 242 LNIGGGPAR-----YVVATDTLKNVVYVTCDLNCPALWTRRMELSDMHWISGEP-AADGR 295 Query: 306 CTVKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTPGQSAVFYNGEVCLGGGIIE 361 ++TR+ +P T D+ FD+PV V PGQSAV Y+G+ +GGGIIE Sbjct: 296 YVIRTRHTGALVPVTFTLTDNQCGFAEFDQPVKTVAPGQSAVLYDGQEVVGGGIIE 351 >UniRef50_Q73PV6 tRNA-specific 2-thiouridylase mnmA n=2 Tax=Treponema RepID=MNMA_TREDE Length = 366 Score = 242 bits (618), Expect = 1e-62, Method: Compositional matrix adjust. Identities = 144/358 (40%), Positives = 207/358 (57%), Gaps = 22/358 (6%) Query: 7 KVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYCTAAADLADAQAVCDKLG 66 KV+VG+SGGVDS+V+A LL QGY V G+ M+ + G Y D+ DA+ V DKLG Sbjct: 2 KVLVGLSGGVDSAVAAKLLIDQGYDVTGVTMQLLPKLSGI-YKEQTDDIEDAKKVADKLG 60 Query: 67 IELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGADYIAT 126 I+ + + + + F+ EYK GRTPNP +CN +IKF FLE A +D G D IAT Sbjct: 61 IKHIVYDMRETFKTEIIDYFVEEYKQGRTPNPCFICNSKIKFGLFLEQALKD-GFDKIAT 119 Query: 127 GHY--VRRADVDGKSRLL--RGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQVRKIA 182 GHY + + +++G R L + D+ KDQSYFL L+ EQ+++S+FP+G+ K +VR IA Sbjct: 120 GHYAKIEKTEIEGDERFLLRQAEDAQKDQSYFLALLTQEQLSRSIFPLGDFTKEKVRSIA 179 Query: 183 EDLGLVTAKKKDSTGICFIGERKFREFLGRYLPA--QPGKIITVDGDEIGEHQGLMYHTL 240 ED GL+ A + DS ICF+ + + + + GK I G+EIG H+GL Y+T+ Sbjct: 180 EDAGLINAHRPDSQDICFVPDDDYTRVINALAAGSFKEGKFIDTMGNEIGRHKGLQYYTI 239 Query: 241 GQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLHWVDREPF 300 GQR+GL I P YVV KD + N + V + E L + LIA +++ + ++ Sbjct: 240 GQRRGLAI-----AMGYPVYVVKKDAKTNTVTVGKDEE---LFAESLIASRVNIILKKTI 291 Query: 301 TGTMRCTVKTRYRQTDIPCTVKALDDD------RIEVIFDEPVAAVTPGQSAVFYNGE 352 + VKTRYRQ + L ++ + +V F EP AV GQ+AVFY G+ Sbjct: 292 DKEIDIEVKTRYRQQKKKAKLIPLKNEEFKPTGKFKVEFIEPEKAVAEGQAAVFYTGD 349 >UniRef50_C1XSA6 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase n=4 Tax=Deinococci RepID=C1XSA6_9DEIN Length = 371 Score = 242 bits (618), Expect = 1e-62, Method: Compositional matrix adjust. Identities = 151/370 (40%), Positives = 216/370 (58%), Gaps = 23/370 (6%) Query: 1 MSETAKKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNW---EEDDGEEYCTAAADLAD 57 M + +V+V MSGGVDSSVSA LL+ QGY+V G M+ W ++DD E C + + Sbjct: 1 MLVSKGRVLVAMSGGVDSSVSAALLKAQGYEVIGAMMRFWPDNKKDDCFETCCSPDAAYE 60 Query: 58 AQAVCDKLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAE 117 A+ V D +G+ + +++ E+ + + + F+A Y AG TPNP + CN +KF + L+ A Sbjct: 61 ARRVADIVGVPFYLLDYREEFQEKIIDPFIAGYAAGETPNPCVNCNTRVKFDSLLK-KAR 119 Query: 118 DLGADYIATGHYVRRADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQ 177 LG D++ATGHYV R +G + L RG D KDQ+YFL+ E I +FPVG LEKPQ Sbjct: 120 MLGCDFVATGHYVIR---EGNA-LFRG-DPKKDQTYFLWGTPKEAIPHMMFPVGHLEKPQ 174 Query: 178 VRKIAEDLGLVTAKKKDSTGICFIGERKFREFLGRYLPAQPGKIITVD-GDEIGEHQGLM 236 VR IAE GL TAKK +S ICF+ + +EFL +L A+PG ++ ++ G+ IGEH G Sbjct: 175 VRAIAEQYGLPTAKKPESQNICFV-QGDLKEFLSNHLTARPGPLVDLETGEVIGEHAGAQ 233 Query: 237 YHTLGQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPR--LMSVGLIAQQLHW 294 ++T+GQ+KGLG+ T YVV + N ++V PR + GL A++++ Sbjct: 234 FYTVGQKKGLGL----FKTHLERYVVRVNPATNEVIVG-----PREACLWSGLEAREVNL 284 Query: 295 VDREPFTGTMRCTVKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTPGQSAVFYNGEVC 354 + V+ RYR + V+ L D + V EP AVTPGQS V Y G+ Sbjct: 285 LVEP-EELPETLEVQVRYRTKPVLGKVERLGDGGMTVRLAEPQFAVTPGQSMVLYQGDRL 343 Query: 355 LGGGIIEQRL 364 LGGG I++ L Sbjct: 344 LGGGFIQRPL 353 >UniRef50_Q6BSZ3 DEHA2D04818p n=6 Tax=Saccharomycetales RepID=Q6BSZ3_DEBHA Length = 415 Score = 241 bits (616), Expect = 2e-62, Method: Compositional matrix adjust. Identities = 132/370 (35%), Positives = 201/370 (54%), Gaps = 20/370 (5%) Query: 7 KVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYCTAAADLADAQAVCDKLG 66 ++IV MS GVDSSV A L ++ V G++M NW + CT + D D + +C+ L Sbjct: 49 EIIVAMSSGVDSSVCAALYAEKYKNVRGIYMANWSQTAK---CTES-DWNDVKKICNDLN 104 Query: 67 IELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGAD---Y 123 I VNF EYW+ VF+ + Y+ G TPNPD+ CNK +KF +E + + + Sbjct: 105 IPCERVNFEKEYWNEVFQPMVQMYEKGLTPNPDVGCNKYVKFGKMIEHLTKKFSNNQKWW 164 Query: 124 IATGHYVR--RADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQVRKI 181 + TGHY R + + LLRG +KDQSY+L + ++Q L P+G L KP VR++ Sbjct: 165 LVTGHYARIMKCQTSNEYNLLRGYYKSKDQSYYLANIPKRVLSQVLMPIGHLTKPNVREL 224 Query: 182 AEDLGLVTAKKKDSTGICFIG--ERKFREFLGRYLPAQPGKIITVDGDEIGEHQGLMYHT 239 A+ L TAKK DS G+CF+ E FR FL Y+ PG IIT DG G+HQGL + T Sbjct: 225 AKGYNLHTAKKPDSQGLCFVSQDENNFRNFLNEYIAPNPGNIITEDGKIWGQHQGLWHAT 284 Query: 240 LGQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLHWVDREP 299 +GQ+ G+ + + W++ +K + N LV+ +G+ + RL GL ++ W+ + Sbjct: 285 IGQKSGISMPQGDPRYKGIWFISEKRYDTNELVIVKGNNNDRLFKKGLKVKEWSWLMDDI 344 Query: 300 FTGTMRC---TVKTRYRQTDIPCTVKAL----DDDRIEVIFDEPVAAVTPGQSAVFYNGE 352 + +C + +YR P + ++ D IE++ + A+ PGQ+ V Y G Sbjct: 345 SAISEKCEEGNLSVQYRSLQEPEIINSIKISQSDVDIELV--KKARAMAPGQNIVLYEGN 402 Query: 353 VCLGGGIIEQ 362 LG GI+E+ Sbjct: 403 RVLGSGILEE 412 >UniRef50_D0LWB4 tRNA(5-methylaminomethyl-2-thiouridylate)-methyl transferase n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LWB4_HALO1 Length = 391 Score = 240 bits (612), Expect = 6e-62, Method: Compositional matrix adjust. Identities = 133/371 (35%), Positives = 205/371 (55%), Gaps = 21/371 (5%) Query: 8 VIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEY----CTAAADLADAQAVCD 63 ++ +SGGVDS+V+A +L +QG++V G+ M+ ++ C D+ DA+ VC Sbjct: 7 IVAALSGGVDSAVTAAMLVEQGHRVVGMTMRLYDASGTSASVGGRCCGPRDIEDARRVCA 66 Query: 64 KLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGADY 123 LGI + VNF ++ V + F+ Y AG TPNP + CN+ IKF L A LGA+ Sbjct: 67 HLGIPFYVVNFEVDFAHTVIDDFVDTYLAGETPNPCVKCNQHIKFTPLLA-RARALGAET 125 Query: 124 IATGHYVRRADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQVRKIAE 183 +ATGHY R D RL RG D++KDQSYFL+++ E++A FP+G + K +VR A Sbjct: 126 VATGHYARLEDTGAGIRLRRGRDASKDQSYFLFSMPREELASVRFPLGAMTKDEVRDKAR 185 Query: 184 DLGLVTAKKKDSTGICFIGERKFREFL-------GRYLPAQPGKIITVDGDEIGEHQGLM 236 GL A K DS ICF+ + + F+ R +PA G I+ +G +G H+G+ Sbjct: 186 AYGLPNAAKADSQEICFVPDGDYAGFVEAEALRRSRPVPAS-GDIVDGEGQVLGRHRGVH 244 Query: 237 YHTLGQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLHWVD 296 ++T+GQR+GLG T+ + P YV+ D + +VV + R + + + W+ Sbjct: 245 HYTIGQRRGLGNLRTQTRSPTPLYVIGVDRARDRVVVGPREQAARR---SVPVRDVRWLS 301 Query: 297 REPFTGTMRCTVKTRYRQTDIPCTVKALDD-----DRIEVIFDEPVAAVTPGQSAVFYNG 351 P G + V+ RYR + +P T++ + R+ V FD+ +PGQ+AVFY+G Sbjct: 302 TPPAEGRLSAGVQVRYRSSPLPATLELCGEGDERGKRVRVHFDDAAVIASPGQAAVFYDG 361 Query: 352 EVCLGGGIIEQ 362 + LGGG I + Sbjct: 362 DTVLGGGWIAR 372 >UniRef50_Q2RZN9 tRNA-specific 2-thiouridylase mnmA n=11 Tax=Bacteroidetes RepID=MNMA_SALRD Length = 383 Score = 240 bits (612), Expect = 8e-62, Method: Compositional matrix adjust. Identities = 152/370 (41%), Positives = 201/370 (54%), Gaps = 23/370 (6%) Query: 7 KVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEED-----DGEEY-CTAAADLADAQA 60 +V+V MSGGVDSSV+A LL+++GY V GL MK W+ DG+E C + + DA+ Sbjct: 6 RVLVAMSGGVDSSVTAVLLKERGYDVVGLTMKTWDYSTSGGRDGKEVGCCSIESMNDARV 65 Query: 61 VCDKLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLG 120 V + G V+ E+ D V E F EY +GRTPNP +LCN IK+ A L+ A+DL Sbjct: 66 VATEHGFPHFVVDLREEFGDWVIERFTDEYLSGRTPNPCVLCNTHIKWDALLQ-RADDLD 124 Query: 121 ADYIATGHY--VRRADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQV 178 +YIATGHY VR D + L RGLD NKDQSY L+ L E +A+S+FP+G EKP++ Sbjct: 125 CEYIATGHYANVRYDDERDRYLLSRGLDRNKDQSYALWGLPQEHLARSIFPLGAYEKPEI 184 Query: 179 RKIAEDLGL-VTAKKKDSTGICFIGERKFREFL-----GRYLPAQPGKIITVDGDEIGEH 232 R++A + GL A K DS ICFI + + FL G G + DG +GEH Sbjct: 185 REMAAEFGLDNVADKPDSYEICFIPDNDYPRFLKDRVDGLEEEVSGGTFVLSDGTVVGEH 244 Query: 233 QGLMYHTLGQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQL 292 G ++T+GQR+GL + E YV D D E N + V E LM L A ++ Sbjct: 245 DGYPFYTIGQRRGLDL-----ALGERVYVTDIDPETNTITVGPKEE---LMEQTLTAHEI 296 Query: 293 HWVDREPFTGTMRCTVKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTPGQSAVFYNGE 352 + V G RY C D+D ++V F EP A+TPGQS V Y E Sbjct: 297 NLVKYPELDGERPAWGTIRYNDDGAGCLAWQPDEDTLKVAFAEPKRAITPGQSLVLYEDE 356 Query: 353 VCLGGGIIEQ 362 LGGG I + Sbjct: 357 DVLGGGWIHE 366 >UniRef50_C9LN41 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase n=1 Tax=Dialister invisus DSM 15470 RepID=C9LN41_9FIRM Length = 350 Score = 239 bits (610), Expect = 1e-61, Method: Compositional matrix adjust. Identities = 145/365 (39%), Positives = 196/365 (53%), Gaps = 25/365 (6%) Query: 6 KKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYCTAAADLADAQAVCDKL 65 KKV+V MSGGVDS+++A LLQ+ GY V G M + DG+ D+ +AQ + D L Sbjct: 5 KKVVVAMSGGVDSTLTARLLQEAGYDVYGATMNQF---DGQ-------DMTEAQKIADFL 54 Query: 66 GIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGADYIA 125 GI ++ Y D V F+ YK G TPNP ++C+ +IKF F + Y A Sbjct: 55 GIPHKVIDVRKMYQDIVLSYFVDSYKNGITPNPCMMCDFKIKFGFFYDTVRAFFDCPYFA 114 Query: 126 TGHYVRRADVDGKSR---LLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQVRKIA 182 TGHY R DG R + + D KDQSY +Y L+ +Q+A LFP+G + K R+I+ Sbjct: 115 TGHYAR-ITYDGTRRKYQVEKATDLAKDQSYMMYHLTQDQLAHILFPLGRIYKKDTRRIS 173 Query: 183 EDLGLVTAKKKDSTGICFI-GERKFREFLGRYLPA--QPGKIITVDGDEIGEHQGLMYHT 239 E+ GL T K +S ICF+ E+ + EFL + P +PG I G +G H+GL ++T Sbjct: 174 EEKGLPTYNKAESQDICFLTSEKSYAEFLQNHAPEAFRPGNITDTKGRILGTHKGLPFYT 233 Query: 240 LGQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLHWVDREP 299 +GQRKGLGI + P YVV N ++V + L GL+A +L + D P Sbjct: 234 IGQRKGLGIA-----SRTPLYVVSLHAGKNRVIVGSNDD---LFRSGLLANELDFTDGAP 285 Query: 300 FTGTMRCTVKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTPGQSAVFYNGEVCLGGGI 359 + RC K RY CTV + R V FDEP A+TPGQS VFY LGGG Sbjct: 286 PSQQFRCRAKIRYGIHVHNCTVTLDNHGRAAVKFDEPQRAITPGQSVVFYEENRLLGGGT 345 Query: 360 IEQRL 364 I + L Sbjct: 346 IMKVL 350 >UniRef50_Q9SYD2 F11M15.16 protein n=14 Tax=Magnoliophyta RepID=Q9SYD2_ARATH Length = 421 Score = 238 bits (607), Expect = 2e-61, Method: Compositional matrix adjust. Identities = 137/374 (36%), Positives = 206/374 (55%), Gaps = 25/374 (6%) Query: 1 MSETAKKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEY---CTAAADLAD 57 M E +V V +SGGVDSSV+ LL G+ ++K W ++ E + C DL Sbjct: 1 MPEKPLRVAVLLSGGVDSSVALRLLHAAGHSCTAFYLKIWFQEGFENFWNQCPWEDDLKY 60 Query: 58 AQAVCDKLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAE 117 A+ VC+++ + L V+ EYW+ V + EY+ GRTPNPD+LCN IKF AF++ A Sbjct: 61 AKHVCEQVDVPLEVVHLTDEYWERVVSYIIEEYRCGRTPNPDVLCNTRIKFGAFMD-AIS 119 Query: 118 DLGADYIATGHYVR----RADVDGKSRLLR-GLDSNKDQSYFLYTLSHEQIAQSLFPVGE 172 D+ DY+ +GHY + AD + S +L D KDQ+YFL LS Q+ + LFP+G Sbjct: 120 DMEYDYVGSGHYAKVVHPPADQNDASSVLELSQDMVKDQTYFLSHLSQTQLKRLLFPLGC 179 Query: 173 LEKPQVRKIAEDLGLVTAKKKDSTGICFIGERKFREFLGRYLPAQPGKIITVD-GDEIGE 231 ++K +VRK+A L +KDS GICF+G+ KF +F+ R++ G I+ + GD +G Sbjct: 180 VKKDEVRKLATQFDLPNKDRKDSQGICFLGKIKFSDFVCRHIGEMEGIILEAESGDFLGN 239 Query: 232 HQGLMYHTLGQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGH----EHPRLMSVGL 287 H+G ++T+GQR+GL + G PWYVV+KD +NN++ V++ + + R+ VG Sbjct: 240 HRGFWFYTIGQRQGLRLPGG------PWYVVEKDTKNNVVFVSRNYYSIDKRRRIFRVG- 292 Query: 288 IAQQLHWVDREPFTGTMRCTVKTRYRQTDIPCTVKALDDDRIEVI-FDEPVAAVTPGQSA 346 L W +P K R+ C+ + D + V+ DE + GQ A Sbjct: 293 ---SLRWNSGKPSGKVRELRCKVRHGPGFYSCSFEMEGDGDVAVVHLDEDDQGLAAGQFA 349 Query: 347 VFYNGEVCLGGGII 360 FY G C+G G+I Sbjct: 350 AFYEGTTCIGSGVI 363 >UniRef50_A2CB44 tRNA-specific 2-thiouridylase mnmA n=60 Tax=cellular organisms RepID=MNMA_PROM3 Length = 409 Score = 238 bits (607), Expect = 3e-61, Method: Compositional matrix adjust. Identities = 145/381 (38%), Positives = 206/381 (54%), Gaps = 36/381 (9%) Query: 6 KKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYCTAAADLADAQAVCDKL 65 ++V VG+SGGVDSS+SA LL + G+QVEGL + W C+ L DA +C++L Sbjct: 35 QRVAVGLSGGVDSSLSAALLVEAGWQVEGLTL--WLMSGKGACCSDG--LIDAAGICEQL 90 Query: 66 GIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGADYIA 125 I H V+ A + + + + Y+ G TP P CN+ +KF A L +A ++ +A Sbjct: 91 KIPHHVVDSRATFQAEIVDQLVQGYQQGVTPLPCSRCNRSVKFAAMLSWAEKERQLHRVA 150 Query: 126 TGHYVR-------------RADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGE 172 TGHY R D G+ +LLRGLD NKDQSYFLY LS + +A+ +FP+GE Sbjct: 151 TGHYARIRHREDPEPQQALPGDSSGRHQLLRGLDQNKDQSYFLYDLSQDVLAKVIFPLGE 210 Query: 173 LEKPQVRKIAEDLGLVTAKKKDSTGICFIGER-KFREFLGRYLPAQPGKIITVDGDEIGE 231 L K + R+ AE GL TAKK +S +C + FL YLPA+ G+I+ DG +GE Sbjct: 211 LTKAETRQEAERYGLRTAKKAESQDLCLADHYGSMKAFLDNYLPARQGEIVLQDGKVVGE 270 Query: 232 HQGLMYHTLGQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQ 291 H G+ + T+GQRKGLG+ EP +VV D N ++VA E R + Sbjct: 271 HDGIEHFTIGQRKGLGV-----AWREPLHVVQLDATANRVIVAPRAEAGR---DSCVVGA 322 Query: 292 LHWVDREPFTGTMRCTVKTRYRQTD-----IPCTVKALD-----DDRIEVIFDEPVAAVT 341 ++W+ P + + V+ RYR IP A D R + F+E ++T Sbjct: 323 VNWISIAPPSSAIDVEVQVRYRSGPVAAQLIPIEATAEDIAADRPHRCRLTFNEEQFSIT 382 Query: 342 PGQSAVFYNGEVCLGGGIIEQ 362 PGQ+AVFY + LGGG+I+Q Sbjct: 383 PGQAAVFYAADAVLGGGLIQQ 403 >UniRef50_B0SG84 tRNA-specific 2-thiouridylase mnmA n=6 Tax=Leptospira RepID=MNMA_LEPBA Length = 380 Score = 237 bits (605), Expect = 4e-61, Method: Compositional matrix adjust. Identities = 142/367 (38%), Positives = 211/367 (57%), Gaps = 21/367 (5%) Query: 6 KKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEE-----DDGEEYCTAAADLADAQA 60 +K+IV MSGGVDS+V+A LL + GY V G+ ++ WE D ++ C + D+ DA+ Sbjct: 5 EKIIVAMSGGVDSAVAAGLLMEAGYDVIGVNLRTWEYEAPACDTTKKSCCSPEDIRDARD 64 Query: 61 VCDKLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLG 120 V L I + + + + V + F+++YK GRTPNP + CN +KF A E A+ LG Sbjct: 65 VGLSLNIPFYVIKMEKVFGERVIDRFISDYKDGRTPNPCVECNTFVKFGALFE-QAKKLG 123 Query: 121 ADYIATGHYVRRADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQVRK 180 D IATGHY R +VDG+ + +D K+Q+Y+LY LS + I ++FP+GE++K +VR+ Sbjct: 124 IDKIATGHYARVIEVDGRYAIRNAVDMKKNQTYYLYGLSQDNIKNTVFPLGEMDKSEVRE 183 Query: 181 IAEDLGLVTAKKKDSTGICFIGERKFREFLGRY-LPAQPGKIITVDGDEIGEHQGLMYHT 239 IA+ +GL A+K +S ICFI E +R FL + + PG G IG+HQG T Sbjct: 184 IAKRMGLPVAEKPESQEICFIPENDYRSFLKKKGMEFTPGFFKLASGQIIGKHQGKEGFT 243 Query: 240 LGQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLHWVDREP 299 +GQRKGLGI + P YV+ +E++ VV E +S + +++ + P Sbjct: 244 IGQRKGLGI-----AWKNPLYVL--SIEDDGTVVL--GEEEETVSESFVLEEITYQALAP 294 Query: 300 FT--GTMRCTVKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTPGQSAVFY--NGEVCL 355 +M V+ RYR + C V +L + +V F E V +VTPGQSA FY NG+ Sbjct: 295 LALGQSMEMKVQIRYRSAPVHCKVTSLGET-WKVNFLEDVKSVTPGQSATFYPTNGDYLF 353 Query: 356 GGGIIEQ 362 GGII++ Sbjct: 354 AGGIIQK 360 >UniRef50_O13947 Mitochondrial tRNA-specific 2-thiouridylase 1 n=1 Tax=Schizosaccharomyces pombe RepID=MTU1_SCHPO Length = 415 Score = 237 bits (604), Expect = 6e-61, Method: Compositional matrix adjust. Identities = 141/383 (36%), Positives = 209/383 (54%), Gaps = 21/383 (5%) Query: 3 ETAKKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNW-EEDDGEEYCTAAADLADAQAV 61 ++ KV V MSGGVDSS SA+LL+ QGY VEG+FM+NW +ED C A D A Q V Sbjct: 29 KSQDKVFVAMSGGVDSSFSAYLLKSQGYNVEGVFMRNWLDEDSAPSGCPAERDWATVQKV 88 Query: 62 CDKLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDL-- 119 C KL I NF EYW+ VFE L Y+ G TPNPD+ CN+++KF A + + Sbjct: 89 CKKLNISCRRFNFEKEYWNLVFEPSLDLYENGLTPNPDVSCNRQVKFGALFDALKKHCEN 148 Query: 120 ---GADYIATGHYVRR-ADVD-GKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELE 174 G ++A+GHY + +++ +S + D KDQ+ FL T+ E + +++FP+ Sbjct: 149 NVKGDWWLASGHYAKSVVNIETNESHMCIPTDKRKDQTLFLCTIRKEALEKTIFPLHNWT 208 Query: 175 KPQVRKIAEDLGLV-TAKKKDSTGICFIGE---RKFREFLGRYL--PAQPGKII---TVD 225 K V+K A G A+K++S G+CF+ RKFR+FL RYL +P K+I V Sbjct: 209 KENVKKQASSAGFKEIAEKQESQGLCFVSPNVGRKFRKFLQRYLNFSDRPIKVIAGKNVV 268 Query: 226 GDEIGEHQGLMYHTLGQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSV 285 G+ G H G+ T+G+R GL + + WYV KD++NN L + +G + LMS Sbjct: 269 GEFSGNH-GIWSLTVGERCGLSLPQAQSEYFGRWYVWKKDIKNNALYICRGTNNELLMSK 327 Query: 286 GLIAQQLHWVD---REPFTGTMRCTVKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTP 342 + + W + + C V+ R++Q P V + + +++ F + AVTP Sbjct: 328 CIYLKDWKWCGTKLQNLEKSALSCFVRVRHQQPLQPAKVTWRNPESVKIHFQDKQRAVTP 387 Query: 343 GQSAVFYNGEVCLGGGIIEQRLP 365 GQ Y +VCLGGG+++ P Sbjct: 388 GQVIAVYVNDVCLGGGMVDTVEP 410 >UniRef50_B8P9F0 Predicted protein n=1 Tax=Postia placenta Mad-698-R RepID=B8P9F0_POSPM Length = 356 Score = 236 bits (603), Expect = 7e-61, Method: Compositional matrix adjust. Identities = 137/361 (37%), Positives = 199/361 (55%), Gaps = 23/361 (6%) Query: 12 MSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDD---GEEYCTAAADLADAQAVCDKLGIE 68 MSGGVDSSV A LL +Q Y + +FM+NW+ D ++ C D D Q VC L I Sbjct: 1 MSGGVDSSVVAKLLAEQDYDLSAVFMRNWDTRDESGTDKGCEWEKDWEDVQRVCKMLDIP 60 Query: 69 LHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFL-EFAAEDLGADYIATG 127 V+ + +YW VFE L ++ G+TPNPDI CN+E+KF A + + +D+ ++ATG Sbjct: 61 CEMVDLSQQYWTRVFEPSLQLWEKGQTPNPDIWCNREVKFGALMDQLTGDDV---WVATG 117 Query: 128 HYVRRADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQVRKIAEDLGL 187 HY ++ KS L R D KDQ+Y+L + +A+++FP+ K +VR +A+ L Sbjct: 118 HYADKSWFPCKS-LRRPRDRTKDQTYYLSAIPEASLARTIFPLAPFAKTEVRAMAKKWEL 176 Query: 188 VTAKKKDSTGICFIGE-RKFREFLGRYLPAQPGKIITVD-GDEIGEHQGLMYHTLGQRKG 245 TA++ +S GICF+GE R+F FL +Y+ + G II + G ++G H GL +T+GQ Sbjct: 177 PTAQRAESMGICFVGEKRRFDGFLSQYITPRQGPIIDLQTGKQLGTHTGLWTYTIGQNAR 236 Query: 246 LGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLHWVDREPFTGTM- 304 L G E +V KD E N + V HP L S LIA W+ R+ G + Sbjct: 237 L------PGMPERMFVAKKDAERNEIYVVPSSTHPALYSRSLIASAWQWIWRDHPPGGID 290 Query: 305 -----RCTVKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTPGQSAVFYNGEVCLGGGI 359 V+ R+R D P T++ I + F+EP +V PGQ A ++G+ CLG GI Sbjct: 291 DELGFHGRVQYRHRMLDAPATIQRRGHT-IHITFEEPQQSVAPGQIAAVWDGDWCLGSGI 349 Query: 360 I 360 I Sbjct: 350 I 350 >UniRef50_Q1J090 tRNA-specific 2-thiouridylase mnmA n=5 Tax=Deinococci RepID=MNMA_DEIGD Length = 381 Score = 236 bits (601), Expect = 1e-60, Method: Compositional matrix adjust. Identities = 143/369 (38%), Positives = 215/369 (58%), Gaps = 27/369 (7%) Query: 3 ETAKKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEED---DGEEYCTAAADLADAQ 59 + +++V+ MSGGVDSSV+A LL+ GYQV G M+ W +D D + C + +A+ Sbjct: 6 KASQRVLCAMSGGVDSSVTAALLKDAGYQVIGAMMRFWPDDKRVDTFDTCCSPDAAYEAR 65 Query: 60 AVCDKLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDL 119 V +++G+ + +++ ++ ++ FL+EY GRTPNP + CN ++KF ++ A+ L Sbjct: 66 RVAEQVGVPFYLLDYREQFQHHIVGPFLSEYAQGRTPNPCVNCNTKVKFDELVK-KAKML 124 Query: 120 GADYIATGHYVRRADV-DGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQV 178 G Y+ATGHYV+R + DG RG D KDQ+YFL+ E + LFPVGELEKP+V Sbjct: 125 GCRYVATGHYVKRVEREDGSVEFHRGDDPRKDQTYFLWGTPREALPFILFPVGELEKPRV 184 Query: 179 RKIAEDLGLVTAKKKDSTGICFIGERKFREFLGRYLPAQPGKIITV-DGDEIGEHQGLMY 237 R+IA + GL+TA+K +S ICF+ K ++F+ +LP + G I + G+ +GEH G + Sbjct: 185 REIAAEKGLLTARKPESQNICFV-PGKVQDFVAEHLPQRQGLIREIRTGEVVGEHLGTQF 243 Query: 238 HTLGQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLHW--- 294 +TLGQ+KGLG+ T +VV D E N + V ++ + GL A+ ++ Sbjct: 244 YTLGQKKGLGL----YQTHRVRHVVHLDPETNTVWVG---DYEDCLWTGLKAEGANYLLD 296 Query: 295 ---VDREPFTGTMRCTVKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTPGQSAVFYNG 351 + RE V+ RYR + TV D+ E+ F+EP AV PGQSAV Y G Sbjct: 297 LAELPRE-------VEVQVRYRTKPVRATVLHADEHGFELQFEEPQFAVAPGQSAVLYAG 349 Query: 352 EVCLGGGII 360 LGGG+I Sbjct: 350 TRLLGGGLI 358 >UniRef50_Q7TTZ4 tRNA-specific 2-thiouridylase mnmA n=2 Tax=Planctomycetaceae RepID=MNMA_RHOBA Length = 399 Score = 235 bits (600), Expect = 2e-60, Method: Compositional matrix adjust. Identities = 138/397 (34%), Positives = 216/397 (54%), Gaps = 48/397 (12%) Query: 6 KKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEED---------------------- 43 +V++ MSGGVDSSV+A LL + G++V G+FM++ E Sbjct: 2 SRVVLAMSGGVDSSVAAHLLLRDGHEVIGVFMRHGEASAAACRIDSDEPQNTNPLNLPVL 61 Query: 44 ---------DGEEYCTAAADLADAQAVCDKLGIELHTVNFAAEYWDNVFELFLAEYKAGR 94 D ++ C +A D ADA+ V +GI ++++ E + + + F+ +Y A R Sbjct: 62 GDSAGGKRADHKQGCCSATDAADARRVAMSMGIPFYSLDLQ-EDFRKIVDYFVDDYLAAR 120 Query: 95 TPNPDILCNKEIKFKAFLEFAAEDLGADYIATGHYVRRADVDGKSRLLRGLDSNKDQSYF 154 TPNP + CN IKF ++A + + A+++ATGHY R +G+S L RGLD +KDQSY Sbjct: 121 TPNPCVKCNHWIKFGRLFDYA-DGVDAEFVATGHYARMVHSNGRSELHRGLDGHKDQSYA 179 Query: 155 LYTLSHEQIAQSLFPVGELEKPQVRKIAEDLGLVTAKKKDSTGICFIGERKFREFLGRYL 214 L+ + ++++ + PVG+ KP++R++A LGL + KKDS ICF+ + +F+ Sbjct: 180 LFGIDPARLSRMMLPVGDFTKPEIREMATSLGLGVSDKKDSQEICFVTQGHHSDFVKSRR 239 Query: 215 P----AQPGKIITVDGDEIGEHQGLMYHTLGQRKGLGIGGTKEGTEEPWYVVDKDVENNI 270 P A G+I+T G +GEH+G T+GQRK LG+ EP +V+ + + Sbjct: 240 PEMVGATAGEIVTTGGKVVGEHKGFEAFTIGQRKRLGV-----AMGEPHFVIRIEPDTRR 294 Query: 271 LVVAQGHEHPRLMSVGLIAQQLHW-VDREPFTGTMRCTVKTRYRQTDIP--CTVKALDDD 327 +V+ + E L+ GL+A Q +W V RE ++ RY P + D Sbjct: 295 VVIGRAEE---LLRPGLVADQCNWFVTREELADAQSVGIQIRYNGQPHPGHVVMDGSDPT 351 Query: 328 RIEVIFDEPVAAVTPGQSAVFYNGEVCLGGGIIEQRL 364 R++V+FD+P AAV PGQ+AV Y+GE LGGG I + Sbjct: 352 RMKVMFDDPQAAVAPGQAAVVYDGERVLGGGWITHAI 388 >UniRef50_Q1IPC9 tRNA-specific 2-thiouridylase mnmA n=2 Tax=Bacteria RepID=MNMA_ACIBL Length = 370 Score = 235 bits (599), Expect = 2e-60, Method: Compositional matrix adjust. Identities = 138/376 (36%), Positives = 210/376 (55%), Gaps = 30/376 (7%) Query: 5 AKKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEE----------DDGEEYCTAAAD 54 ++ + V MSGGVDSS A +L+ +GY + GL M+ W + + G C + D Sbjct: 4 SETIAVAMSGGVDSSTVAAMLRAEGYNLVGLTMQLWNQRRLAHHEGFGEPGVGRCCSLDD 63 Query: 55 LADAQAVCDKLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEF 114 + DA+ V + L I + VN + +V + F+ +Y +GRTP P LCN +KF L Sbjct: 64 VYDARRVAETLAIPYYVVNQEDRFERDVVKPFVEDYLSGRTPIPCSLCNNHLKFDQLLR- 122 Query: 115 AAEDLGADYIATGHYVRRADVD---GKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVG 171 A+ +GA+ IATGHY R D + G+ L R D KDQ+YFL+ L+ EQ++++LFP+G Sbjct: 123 TAQQIGAEKIATGHYARN-DFNAQTGRWELKRPADRAKDQTYFLFGLTQEQLSRTLFPLG 181 Query: 172 ELEKPQVRKIAEDLGLVTAKKKDSTGICFIGERKFREFLGRY-------LPAQPGKIITV 224 KP+VR+ A++ GL +K DS ICFI +++FL Y LP G+++T Sbjct: 182 HKTKPEVREDAKNHGLKLFEKPDSQEICFIPNGDYKKFLDAYLEEQGESLPDTSGELVTS 241 Query: 225 DGDEIGEHQGLMYHTLGQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMS 284 G+ +G H G+ T+GQRKGLG+ T P YV++ + +VV E L++ Sbjct: 242 SGEVVGHHTGIHNFTVGQRKGLGV-----ATGSPLYVIELRGDKRQVVVGNNDE---LLT 293 Query: 285 VGLIAQQLHWVDREPFTGTMRCTVKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTPGQ 344 L A++++W+ MR K R++ T++ DD + V FD+P AVTPGQ Sbjct: 294 RNLRAKRMNWIAVSDLAQPMRVHAKIRHKHEPAWATIEKTGDDEVLVTFDDPQRAVTPGQ 353 Query: 345 SAVFYNGEVCLGGGII 360 + V Y+G+V +GGG I Sbjct: 354 AVVLYDGDVVVGGGWI 369 >UniRef50_C9RNM8 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase n=1 Tax=Fibrobacter succinogenes subsp. succinogenes S85 RepID=C9RNM8_FIBSS Length = 355 Score = 234 bits (597), Expect = 3e-60, Method: Compositional matrix adjust. Identities = 146/363 (40%), Positives = 202/363 (55%), Gaps = 12/363 (3%) Query: 1 MSETAKKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYCTAAADLADAQA 60 MS+T +V VGMSGGVDSSV+A LLQQQGY+V G+ ++ + D + A+ Sbjct: 1 MSKT--RVAVGMSGGVDSSVAALLLQQQGYEVVGVTLRVLPDVDSAFDVENDPSVVRAKM 58 Query: 61 VCDKLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLG 120 + +KLGIE H N + + V + A++ RTPNP CN+ IKF +++A + LG Sbjct: 59 IAEKLGIEHHVANCSDAFTGEVLKRCHADFSHARTPNPCCYCNRFIKFGWMMDYA-KSLG 117 Query: 121 ADYIATGHYVRRADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQVRK 180 A+++ATGHYVR +V+G RLLRG D KDQSYFL+ + E+ L P+G K +VR+ Sbjct: 118 AEFLATGHYVRIEEVNGVRRLLRGRDPGKDQSYFLFWVPDERRNHVLTPLGTYVKSEVRE 177 Query: 181 IAEDLGLVTAKKKDSTGICF-IGERKFREFLGRYLP--AQPGKIITVDGDEIGEHQGLMY 237 IA G V AK DS ICF I ++ EFL +PG+ + G H G Sbjct: 178 IAAQNGFVNAKTGDSQDICFDIYGSQYTEFLKDRFGEMTRPGRFVDEKGKVWNTHDGFHK 237 Query: 238 HTLGQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLHWVDR 297 +T+GQRKGLG+ P +V D E ++V V ++ + H R Sbjct: 238 YTVGQRKGLGV-----AIGVPAFVKHVDPETGDILVTGDKSSVCFDRVEMVNCEWHGGVR 292 Query: 298 EPFTGTMRCTVKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTPGQSAVFYNGEVCLGG 357 E T T R RYRQ + C V +D ++ +FDEP+ AVTPGQ AVFY+G++ LGG Sbjct: 293 EVGT-TFRAEGMVRYRQRAVGCEVTIVDTNKAVAVFDEPLFAVTPGQCAVFYDGDMVLGG 351 Query: 358 GII 360 G I Sbjct: 352 GQI 354 >UniRef50_B8CCP6 tRNA-methyltransferase (Fragment) n=1 Tax=Thalassiosira pseudonana RepID=B8CCP6_THAPS Length = 392 Score = 234 bits (597), Expect = 4e-60, Method: Compositional matrix adjust. Identities = 143/389 (36%), Positives = 212/389 (54%), Gaps = 30/389 (7%) Query: 3 ETAKKVIVGM--SGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDD----GEEYCTAAADLA 56 +T +K V M SGGVDSSV+ LL +Q Y V +++ W ED+ GE C DL Sbjct: 6 DTTRKPTVAMLLSGGVDSSVAMHLLLRQNYNVTAFYLRIWLEDELSHLGE--CPWEDDLQ 63 Query: 57 DAQAVCDKLG-IELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFA 115 Q+VC+ G + L TV+ EY + V + + E + GRTPNPDI+CN +KF FLE+ Sbjct: 64 VCQSVCEHAGNVSLETVSLGKEYRERVVQYTIEEAQRGRTPNPDIMCNSRVKFGCFLEYI 123 Query: 116 AED-LGADYIATGHYVRRADVDGKS-----RLLRGLDSNKDQSYFLYTLSHEQIAQSLFP 169 E + DY+A+GHY + D D S RL R D KDQSYFL L+ +Q+++ +FP Sbjct: 124 EESGMDFDYVASGHYAQLKDDDDTSSISQKRLFRAPDPVKDQSYFLCALTQKQLSKVIFP 183 Query: 170 VGELEKPQVRKIAEDLGLVTAKKKDSTGICFIGERKFREFLGRYLPAQPGKII-TVDGDE 228 +GE +K +VR++A L + DS G+CF+G+ +F +FL YL +PG ++ ++GD Sbjct: 184 IGEYQKSEVRELATQFQLPNRNRPDSQGLCFLGKVRFDDFLASYLGDRPGDVVDALNGDV 243 Query: 229 IGEHQGLMYHTLGQRKGLGIGGTKEGTEE-PWYVVDKDVENNILVVAQGHEHPRLMSVG- 286 IG H GL YHT+GQRKG+G T + PWYVV KD E +I+ V+ ++ Sbjct: 244 IGRHNGLWYHTVGQRKGIGKVMFPLATAKGPWYVVAKDQERDIVYVSNRYDEDDFAQARS 303 Query: 287 -LIAQQLHWVDRE-PFTG-------TMRCTVKTRYRQTDIPCTVKALDDDRI-EVIFDEP 336 + + W+ E P +R +K R+ + T+ DD + + D+ Sbjct: 304 EFEVEDVRWLAGEAPMNAHHEKSWHEVRLDMKIRHGPRVVQGTLMLKDDGSVGNIRLDQK 363 Query: 337 VAAVTPGQSAVFYNGEV--CLGGGIIEQR 363 + PGQ VFY + CLG +I ++ Sbjct: 364 DGGLAPGQYVVFYQPDTLECLGAAVISEK 392 >UniRef50_B3DUT9 tRNA(5-methylaminomethyl-2-thiouridine)-methyltransferase n=1 Tax=Methylacidiphilum infernorum V4 RepID=B3DUT9_METI4 Length = 367 Score = 234 bits (597), Expect = 4e-60, Method: Compositional matrix adjust. Identities = 135/362 (37%), Positives = 207/362 (57%), Gaps = 16/362 (4%) Query: 7 KVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEE---DDGEEYCTAAADLADAQAVCD 63 +++VGMSGGVDS+V+A+LL+++G+ V G+ +K W + E C + DA+ + Sbjct: 13 RIVVGMSGGVDSTVAAYLLKREGFDVVGITLKIWTDRCMHISSEKCCGPDAINDARNMAA 72 Query: 64 KLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGADY 123 ++GI + ++ A + V FL EY GRTPNP + CN++IKF L + G +Y Sbjct: 73 QIGIPHYVLDEADCFEKEVISYFLREYSLGRTPNPCVKCNEKIKF-GRLWTRVQSWGVEY 131 Query: 124 IATGHYVRRADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQVRKIAE 183 +ATGHY + D RL + D +DQSYFL++LS Q+++ + P+G LEK +VR IA+ Sbjct: 132 LATGHYALVENQDHIPRLKKAKDKRRDQSYFLFSLSAGQLSRMITPLGNLEKKEVRAIAK 191 Query: 184 DLGLVTAKKKDSTGICFIGERKFREFL-GRYLPA--QPGKIITVDGDEIGEHQGLMYHTL 240 + GL K++S ICF+ + ++EF+ G+ P+ G II +G IGEHQG+ +T+ Sbjct: 192 EAGLNVWNKEESRDICFVPGKNYKEFIQGKKTPSNTHSGFIIDEEGKVIGEHQGIEGYTV 251 Query: 241 GQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLHWVDREPF 300 GQRKGL G P YVVD D E+ + + L A Q HW++++ Sbjct: 252 GQRKGL-----PGGQGRPLYVVDIDPESKTI---RAGSLKSLFKTHCYASQAHWIEKD-I 302 Query: 301 TGTMRCTVKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTPGQSAVFYNGEVCLGGGII 360 TVK RY ++ + L DR + F P ++PGQ+AV Y+G++ LGGG I Sbjct: 303 ESPRPVTVKLRYNYPEVEALLTLLGKDRFRLDFSSPQMGISPGQAAVCYDGDIVLGGGWI 362 Query: 361 EQ 362 E+ Sbjct: 363 ER 364 >UniRef50_C3J919 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase n=15 Tax=Bacteria RepID=C3J919_9PORP Length = 383 Score = 234 bits (596), Expect = 4e-60, Method: Compositional matrix adjust. Identities = 132/368 (35%), Positives = 205/368 (55%), Gaps = 24/368 (6%) Query: 8 VIVGMSGGVDSSVSAWLLQQQGYQVEGLFMK-NWEEDDGEEYCTAAADLADAQAVCDKLG 66 + V SGGVDSSV+ LL Q G++ + +++ E+++G C A D+ + K Sbjct: 21 IAVLASGGVDSSVAVHLLLQAGFRPDLFYIRIGMEDEEGFIDCPAEEDMEMVTLLARKYQ 80 Query: 67 IELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGADYIAT 126 + ++ EYW+ V + + + G TPNPD++CNK IKF F E DYIAT Sbjct: 81 LHYEVIDLHKEYWERVVKYTIESVRQGLTPNPDMMCNKLIKFGVFEERVGHRY--DYIAT 138 Query: 127 GHYVRRADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQVRKIAEDLG 186 GHY A VDGK+ L D KDQ+ FL ++ +QI++ LFP+G L K QVR +AE+ G Sbjct: 139 GHYASTARVDGKTFLATAPDPVKDQTDFLAQINFKQISKLLFPLGCLTKQQVRMVAEEAG 198 Query: 187 LVTAKKKDSTGICFIGERKFREFLGRYLPAQPGKIITVD-GDEIGEHQGLMYHTLGQRKG 245 L A +KDS GICF+G+ + +F+ RYL +PG+II + G +G HQG +HT+GQRKG Sbjct: 199 LANAHRKDSQGICFLGKINYNDFIERYLGKRPGRIIEYETGKTLGTHQGFWFHTIGQRKG 258 Query: 246 LGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLHWVDREPFTG--- 302 LG+ G PW+VV KD + NI++V++G++ + + ++ + F Sbjct: 259 LGLSGG------PWFVVKKDCKRNIILVSRGYDPLTQYGTEIFVDKFDFITEDLFAPEGA 312 Query: 303 --------TMRCTVKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTPGQSAVFYNGE-- 352 + T+K R+ + T++ L+ ++ + P+ + PGQ AV Y+ E Sbjct: 313 VGNKEGAQVVPITLKIRHTPEFVRATIRRLERG-YHIVSETPIQGIAPGQYAVIYDPESR 371 Query: 353 VCLGGGII 360 +C G G+I Sbjct: 372 LCFGSGMI 379 >UniRef50_C1A7G2 tRNA-specific 2-thiouridylase MnmA n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1A7G2_GEMAT Length = 381 Score = 234 bits (596), Expect = 5e-60, Method: Compositional matrix adjust. Identities = 143/371 (38%), Positives = 207/371 (55%), Gaps = 21/371 (5%) Query: 1 MSETAKKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEE--DDGEEYCTAAADLADA 58 + +V+V MSGGVDSSV+A +L + G V G+ MK + D + C + +DA Sbjct: 4 LPPKGARVLVAMSGGVDSSVAAAILMEHGCDVVGVTMKLHGDGADVPDRPCCSLDATSDA 63 Query: 59 QAVCDKLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAED 118 + VC+KLGI + N + +V + F+ EY GRTP P + CN KF+ L A+ Sbjct: 64 RRVCEKLGIPHYVTNLVDHFSHDVLDDFVQEYARGRTPIPCVRCNTFTKFRDLLH-KADA 122 Query: 119 LGADYIATGHYVRRADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQV 178 + A ++ATGHY R G++ ++RGLD++KDQSYFL+ + + + + P+G K + Sbjct: 123 IDAPWLATGHYARIGHRHGQAVMVRGLDTSKDQSYFLWGIDRPVLDRLVLPIGAQTKAET 182 Query: 179 RKIAEDLGLVTAKKKDSTGICFIGE----RKFREFLGRYLPA-QPGKIITVDGDEIGEHQ 233 R IA GL TA+K +S ICF+ + R E LG PA QPG + G+ IGEHQ Sbjct: 183 RDIARRFGLRTAEKIESQDICFVPDGDHVRVIAEHLGADAPALQPGPLRLASGEIIGEHQ 242 Query: 234 GLMYHTLGQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPR--LMSVGLIAQQ 291 G T+GQRKGL G EP +VV+ +VV PR L+ G+ A++ Sbjct: 243 GFARFTIGQRKGL-----PGGFAEPMFVVEIVPSERAVVVG-----PREALLGRGVEARE 292 Query: 292 LHWVDREPFTGTMRCTVKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTPGQSAVFYNG 351 L+W+ P G + V+ R R P T+ +D IE+ DE V A++PGQS V ++G Sbjct: 293 LNWLAEAPPVGA-QVQVQVRNRARPSPATIVRVDPQGIELALDEAVQAISPGQSLVVFDG 351 Query: 352 EVCLGGGIIEQ 362 +V LGGGIIE+ Sbjct: 352 DVVLGGGIIER 362 >UniRef50_Q6C0F9 YALI0F25069p n=1 Tax=Yarrowia lipolytica RepID=Q6C0F9_YARLI Length = 399 Score = 234 bits (596), Expect = 5e-60, Method: Compositional matrix adjust. Identities = 134/365 (36%), Positives = 203/365 (55%), Gaps = 17/365 (4%) Query: 8 VIVGMSGGVDSSVSAWLLQQQGY-QVEGLFMKNWEEDDGEEYCTAAADLADAQAVCDKLG 66 V V MS GVDSSV+A L+ ++ +V G+FM+NW D A AD D Q VC + Sbjct: 39 VYVAMSAGVDSSVTAALMAERYKGRVTGVFMRNWSPDSK----CAEADWNDVQQVCAHID 94 Query: 67 IELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKF---KAFLEFAAEDLGAD- 122 I ++ EYW VFE L Y+ G TPNPD+ CN+ IKF K L+ E+ G + Sbjct: 95 IPAVNLSLEKEYWLEVFEPMLERYRQGLTPNPDVSCNRYIKFGSLKHRLKDRHENSGMEG 154 Query: 123 --YIATGHYVR-RADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQVR 179 ++ATGHY R D G L R KDQSY+L +++ + + +FP+ + KP++R Sbjct: 155 DWWLATGHYARVMTDESGTPGLFRPKHLAKDQSYYLSSVNSDSLRNVMFPLSDYLKPEIR 214 Query: 180 KIAEDLGLVTAKKKDSTGICFIGE--RKFREFLGRYLPAQPGKIITVDGDEIGEHQGLMY 237 ++A L A K DS G+CF+ + RKFR+FL Y+ PG +IT +G+ +G+H GL Sbjct: 215 EMAHAYKLHVASKPDSQGLCFVSQDQRKFRDFLSDYISTTPGNVITEEGEVVGQHNGLWN 274 Query: 238 HTLGQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLHWVDR 297 T+GQ+ G+ + W+V +K+++ N LV+ +G HP L S + A+ W+ Sbjct: 275 ATVGQKSGICLPQGNPKYRGSWFVKEKNIDTNELVIVKGGNHPSLFSSNIKAKYFSWLGT 334 Query: 298 EP--FTGTMRCTVKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTPGQSAVFYNGEVCL 355 +P +G M T++ R + T A++ + I + PV AV+PGQ+ V Y+ + L Sbjct: 335 KPADLSG-MNLTIQFRSLMEPVAITNLAIEGEDIAIRTAVPVRAVSPGQNLVLYHEDRVL 393 Query: 356 GGGII 360 G G+I Sbjct: 394 GCGVI 398 >UniRef50_C8WLL2 tRNA(5-methylaminomethyl-2-thiouridylate)-methyl transferase n=1 Tax=Eggerthella lenta DSM 2243 RepID=C8WLL2_EGGLE Length = 352 Score = 233 bits (595), Expect = 7e-60, Method: Compositional matrix adjust. Identities = 144/359 (40%), Positives = 197/359 (54%), Gaps = 19/359 (5%) Query: 7 KVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYCTAAADLADAQAVCDKLG 66 ++ +GMSGGVDS+VSA LL + GY+V G+ + + ADA AVC +LG Sbjct: 6 RIALGMSGGVDSAVSAALLMRAGYEVVGVTCRFRDNA------ATERAAADAAAVCSQLG 59 Query: 67 IELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGADYIAT 126 I E+ V E F++ Y AG TP+P + CN K A + A E LG D IAT Sbjct: 60 IRHEAPGCVGEFERCVVEPFVSSYAAGLTPSPCVGCNARCKMPALVRVAGE-LGCDRIAT 118 Query: 127 GHYVRRADVDGKSRLL--RGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQVRKIAED 184 GHY R A + R + R LD+ KDQSY L LS EQ+A+ + P+G + K +VR IA D Sbjct: 119 GHYARIARLSDSGRFVVKRALDARKDQSYMLSLLSQEQLARLVLPLGAMTKAEVRVIAAD 178 Query: 185 LGLVTAKKKDSTGICFIGERKFREFL-GRYLPAQPGKIITVDGDEIGEHQGLMYHTLGQR 243 LGLV A+K +S CFI E +R FL R + PG I+ G+ +G H+GL +T+GQR Sbjct: 179 LGLVVAEKAESQDNCFI-EGDYRPFLRARGVEDAPGDIVDRMGNVLGCHEGLANYTVGQR 237 Query: 244 KGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLHWVDREPFTGT 303 KG+G+ G EP+YVV+K VE LVV E + ++ ++W E + Sbjct: 238 KGIGVAGP-----EPYYVVEKRVETRELVVGFADET---LIGSVVVGGMNWQAFESLGES 289 Query: 304 MRCTVKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTPGQSAVFYNGEVCLGGGIIEQ 362 VK RYR C ++ DD R+ + P PGQ AV Y+G+ LGGG+IE+ Sbjct: 290 YGAMVKLRYRSRPCACIIEPEDDQRVSLALRSPQPTTAPGQYAVLYDGDTVLGGGMIEE 348 >UniRef50_Q1NYA2 TRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase n=3 Tax=Deltaproteobacteria RepID=Q1NYA2_9DELT Length = 443 Score = 233 bits (593), Expect = 1e-59, Method: Compositional matrix adjust. Identities = 143/376 (38%), Positives = 198/376 (52%), Gaps = 37/376 (9%) Query: 6 KKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYCTAAADLADAQAVCDKL 65 ++V V MSGGVDSSV+A LLQQ G +V G+FM+ + + A A AV D L Sbjct: 76 RQVAVAMSGGVDSSVTAALLQQAGAEVRGVFMRLAQPE-------VEAHRQRAAAVADFL 128 Query: 66 GIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGADYIA 125 GIEL ++ A + V F+ Y AG TPNP + CN+ IKF LE G + +A Sbjct: 129 GIELTVLDLAQPFRQQVLNPFVEAYLAGLTPNPCVFCNRLIKFGLLLEILLAQ-GVELLA 187 Query: 126 TGHYVRR-ADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQVRKIAED 184 TGHYVR G RL RGLD KDQSYFL L+ E++ + LFP+G+ K +V ++A Sbjct: 188 TGHYVRLLPAATGGRRLCRGLDPGKDQSYFLCRLAAEKLPRLLFPLGDKHKSEVYQLAAR 247 Query: 185 LGLVTAKKKDSTGICFIGERKFREFLGRY--------------------LPAQPGKIITV 224 LGL +S +CF+G++ +FL + L A+ G+I+TV Sbjct: 248 LGLSGRHGSESQDVCFLGKQSVGDFLAAHGPPGGAEGAGPAAGGGEVSELRARQGRIVTV 307 Query: 225 DGDEIGEHQGLMYHTLGQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMS 284 DG E+G+H G+ +T+GQR+GLGI P+YVV D N++VV + + R + Sbjct: 308 DGRELGQHGGVHRYTVGQRRGLGIPDAT-----PYYVVALDAARNLVVVGKPEDLQRRL- 361 Query: 285 VGLIAQQLHWVDREPFTGTMRCTVKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTPGQ 344 + L+W+ P R V+ R+R P ++ D V FDEP A PGQ Sbjct: 362 --IRLADLNWLTTAPPPLPARFAVQLRHRHRPAPALIEPAADGTFSVSFDEPQRAPAPGQ 419 Query: 345 SAVFYNGEVCLGGGII 360 A Y+GE L GG I Sbjct: 420 YAALYDGEQLLAGGEI 435 >UniRef50_Q0F280 TRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0F280_9PROT Length = 374 Score = 233 bits (593), Expect = 1e-59, Method: Compositional matrix adjust. Identities = 147/364 (40%), Positives = 203/364 (55%), Gaps = 22/364 (6%) Query: 7 KVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWE----EDDGEEYCTAAADLADAQAVC 62 +VI MSGGVDSSV A LL++ G V G+F+ W+ E + C + D DA+ V Sbjct: 23 RVIAAMSGGVDSSVMAVLLKEAGVDVIGVFLNVWDYSRDEVNRHGSCCSLEDSYDARRVA 82 Query: 63 DKLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGAD 122 D +GI + ++ E+ +V + F+ +Y+ GRTPNP CN+ +KF A LE AA+ L A Sbjct: 83 DHIGIPFYAMDMRDEFRRDVIDPFIQDYETGRTPNPCERCNRFVKFGALLE-AADKLEAA 141 Query: 123 YIATGHYVRRADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQVRKIA 182 Y+ATGHYVRR D + L +G D+ KDQSYFL T + Q + LFPVG LEK R++A Sbjct: 142 YVATGHYVRRRDDNDGIHLFKGNDARKDQSYFLATTNRAQAERILFPVGGLEKDDTRRLA 201 Query: 183 EDLGLVTAKKKDSTGICFI--GER-KFREFLGRYLPAQPGKIITVDGDEIGEHQGLMYHT 239 L TA K +S ICFI G+R F + G + G I+ G +G HQG+ ++T Sbjct: 202 HFYKLPTADKHESQDICFIPAGDRIAFLKREGAEAGFREGDIVDTTGRILGRHQGIAHYT 261 Query: 240 LGQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPR-LMSVGLIAQQLHWVDRE 298 LGQRKGLG+ + PW+VV D + VA HP M G+ + W+ RE Sbjct: 262 LGQRKGLGL------PDGPWHVVALDGATARVTVA----HPEDAMIGGVDVSEAVWI-RE 310 Query: 299 PFTGTMRCTVKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTPGQSAVFYNGEVCLGGG 358 P +G T K RY+ C ++ D+ + V F +P PGQ A FY G+ LGGG Sbjct: 311 PKSGEA-VTAKVRYQMQPAACVLEHFDES-LRVTFAQPQKPSAPGQVAAFYAGDELLGGG 368 Query: 359 IIEQ 362 I+ + Sbjct: 369 IVSR 372 >UniRef50_Q5L8X6 tRNA-specific 2-thiouridylase mnmA 3 n=6 Tax=Bacteroides RepID=MNMA3_BACFN Length = 362 Score = 232 bits (592), Expect = 1e-59, Method: Compositional matrix adjust. Identities = 131/366 (35%), Positives = 208/366 (56%), Gaps = 27/366 (7%) Query: 1 MSETAKKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYCTAAADLADAQA 60 M E+ K+V+VGMSGG+DS+ + +LQ+QGY++ G+ M+ W ++ DA+ Sbjct: 1 MKESKKRVLVGMSGGIDSTATCLMLQEQGYEIVGVTMRVWGDEP-----------QDARE 49 Query: 61 VCDKLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLG 120 + ++GIE + + + D + + F+ EY+ GRTPNP ++CN KF+ +E+A + LG Sbjct: 50 LAARMGIEHYVADERVPFKDTIVKNFIDEYRQGRTPNPCVMCNPLFKFRMLIEWA-DKLG 108 Query: 121 ADYIATGHYVRRADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQVRK 180 D+IATGHY R + +G ++ G D KDQSYFL+ L + + + +FP+G K VR Sbjct: 109 CDWIATGHYSRLEERNGHIYIVAGDDDKKDQSYFLWRLGQDVLRRCIFPLGNYTKQTVRD 168 Query: 181 IAEDLGL-VTAKKKDSTGICFIGERKFREFLGRYLP-----AQPGKIITVDGDEIGEHQG 234 + G +K+ +S +CFI + +R+FL P PG ++ +G ++G+H+G Sbjct: 169 YLREKGYEAKSKEGESMEVCFI-KGDYRDFLREQCPELDAEVGPGWFVSSEGVKLGQHKG 227 Query: 235 LMYHTLGQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLHW 294 Y+T+GQRKGL I K P YV+ + + N +++ + L + ++A+Q + Sbjct: 228 FPYYTIGQRKGLEIALGK-----PAYVLKINPQKNTVMLGDAGQ---LRAEYMVAEQDNI 279 Query: 295 VDREPFTGTMRCTVKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTPGQSAVFYNGEVC 354 VD + V+ RYR IPC VK L+D R+ V F +A+ PGQSAVFY G Sbjct: 280 VDEDELFACPDLAVRIRYRSRPIPCRVKRLEDGRLLVRFLAEASAIAPGQSAVFYEGRRV 339 Query: 355 LGGGII 360 LGG I Sbjct: 340 LGGAFI 345 >UniRef50_C2KV29 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase n=6 Tax=Bacteria RepID=C2KV29_9FIRM Length = 362 Score = 232 bits (591), Expect = 2e-59, Method: Compositional matrix adjust. Identities = 133/364 (36%), Positives = 204/364 (56%), Gaps = 19/364 (5%) Query: 6 KKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGE----EYCTAAADLADAQAV 61 +K ++ MSGGVDSSV+A L+Q++GY G+ MK ++ + G+ C D+ DA+ V Sbjct: 2 EKALIAMSGGVDSSVAAALMQEKGYDCIGITMKLYDSETGQACRSRTCCTLEDVEDARQV 61 Query: 62 CDKLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGA 121 L + + +NF ++ V F+ Y+ G TPNP I CN+ +K + AE+L Sbjct: 62 ASTLSMPFYVLNFKDDFQKKVILPFVETYENGGTPNPCIRCNRFMKHDKLYQ-RAEELSC 120 Query: 122 DYIATGHYVR--RADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELE-KPQV 178 YI TGHY R + + G+ L + D KDQSY LY LS EQ+A +LFP+GE K +V Sbjct: 121 SYIVTGHYARIEKDESSGRYLLKKAKDEKKDQSYVLYFLSQEQLAHTLFPLGEYSSKEEV 180 Query: 179 RKIAEDLGLVTAKKKDSTGICFIGERKFREFLGRYL--PAQPGKIITVDGDEIGEHQGLM 236 R+IA+ G + + K DS ICF+ + +FL ++ P G + +G ++GEH+G + Sbjct: 181 REIADKYGFINSDKPDSQDICFVTNGDYGDFLEKFRGKPYPSGDFVDENGKKLGEHRGTV 240 Query: 237 YHTLGQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLHWVD 296 +T+GQRKGLG+ K P YV K++E N ++++ + + GL+A +W+ Sbjct: 241 RYTIGQRKGLGLSLKK-----PMYVSGKNIEKNQVILS---DKEGIYFEGLLANDFNWIS 292 Query: 297 REPFTGTMRCTVKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTPGQSAVFYNGEVCLG 356 P T M KTRY +P V ++ + + F E AVT GQ+ V Y+G++ LG Sbjct: 293 LPP-TEDMAVEAKTRYNGKAVPAIVSVRENGDVFLRFPEKERAVTKGQAVVLYDGDLVLG 351 Query: 357 GGII 360 GG I Sbjct: 352 GGTI 355 >UniRef50_UPI000197B781 hypothetical protein BACCOPRO_02286 n=1 Tax=Bacteroides coprophilus DSM 18228 RepID=UPI000197B781 Length = 361 Score = 231 bits (590), Expect = 2e-59, Method: Compositional matrix adjust. Identities = 138/362 (38%), Positives = 208/362 (57%), Gaps = 19/362 (5%) Query: 3 ETAKKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYCTAAADLADAQAVC 62 E KV++GMSGG DSSV+A LLQ GY+V G+ + +E+D EY L DA+ +C Sbjct: 11 EKNNKVLLGMSGGTDSSVAAMLLQDAGYEVTGITFRFYEKDFQTEY------LEDARHLC 64 Query: 63 DKLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGAD 122 ++LGI T + + + + F+ EY GRTP P LCN ++K+ E A + G Sbjct: 65 EQLGIRHLTYDAREVFEEQIIHYFIQEYMNGRTPVPCTLCNNQLKWPLLKEIADRE-GIY 123 Query: 123 YIATGHYVRRADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQVRKIA 182 ++ATGHYVR+ V+G+ + G D +KDQS+FL+ L + + ++LFP+GEL K +VR+IA Sbjct: 124 HLATGHYVRKQTVNGRWFIRSGADPDKDQSFFLWGLPQDLLERALFPMGELTKVRVREIA 183 Query: 183 EDLG-LVTAKKKDSTGICFIGERKFREFLGRYLP---AQPGKIITVDGDEIGEHQGLMYH 238 + G L A+K+DS G+CF +R FL ++P PG+ + +G ++G+H+G ++ Sbjct: 184 AERGQLKAARKRDSLGVCFC-PMDYRTFLKSHVPEGQISPGEFLDEEGRKLGQHEGYPFY 242 Query: 239 TLGQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLHWVDRE 298 T+GQR+GLGI K +V + E N ++V L ++ + +D E Sbjct: 243 TIGQRRGLGIWLNKT-----LFVKETLPEQNRVIVCDNLRA--LEKQEMLLTDWNLIDPE 295 Query: 299 PFTGTMRCTVKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTPGQSAVFYNGEVCLGGG 358 VK RYR+ CTV D + V EP+A+V PGQ+AVFY ++ LGGG Sbjct: 296 TALNHPDVIVKIRYRKQANRCTVTCTGDGCLHVNLHEPLASVAPGQAAVFYRDDLVLGGG 355 Query: 359 II 360 II Sbjct: 356 II 357 >UniRef50_B7G8R2 Predicted protein (Fragment) n=1 Tax=Phaeodactylum tricornutum CCAP 1055/1 RepID=B7G8R2_PHATR Length = 368 Score = 231 bits (590), Expect = 3e-59, Method: Compositional matrix adjust. Identities = 137/369 (37%), Positives = 201/369 (54%), Gaps = 15/369 (4%) Query: 8 VIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEE--YCTAAADLADAQAVCDKL 65 V + +SGGVDSSV+ LL QQGY V ++K W ED+ +C D Q VC++ Sbjct: 1 VALLLSGGVDSSVALNLLVQQGYDVTAFYLKIWLEDELAHLGHCPWEDDYRVCQEVCEQA 60 Query: 66 GIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGADYIA 125 GI L TV+ Y V + E + GRTPNPDI+CN +KF F E A + D++A Sbjct: 61 GIPLETVSLQNAYKSRVIAYTVHEAEQGRTPNPDIMCNSRVKFGCFYE-AIDQREFDFVA 119 Query: 126 TGHYVR--RADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQVRKIAE 183 +GHY + + G RLLR D KDQSYFL TL+ +Q+ + LFP+G L+K QVR +A+ Sbjct: 120 SGHYAQLVKDTETGSMRLLRAPDPIKDQSYFLCTLTQDQLQRVLFPIGHLQKSQVRDLAD 179 Query: 184 DLGLVTAKKKDSTGICFIGERKFREFLGRYLPAQPGKIITV-DGDEIGEHQGLMYHTLGQ 242 + L + DS G+CF+G+ KF EFL YL +PG I+ GD +G+H G+ YHT+GQ Sbjct: 180 EFILPNRLRPDSQGLCFLGKVKFDEFLAVYLGTRPGPIVDAGTGDVVGQHHGVWYHTVGQ 239 Query: 243 RKGLG-IGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVG--LIAQQLHWVDREP 299 RKG+G + + PWYVV KD +++ + ++ + + +HW+ + Sbjct: 240 RKGIGRVLDPLATSRGPWYVVAKDPGKDVVYCSNQYDEDIFTASRSEFAVENIHWIAGQA 299 Query: 300 FTGTM-----RCTVKTRYRQTDIPCTVKALDD-DRIEVIFDEPVAAVTPGQSAVFYNGEV 353 + R +K R+ + T++ + +V D + PGQ VFY E Sbjct: 300 PPNLLKGDGGRFVMKIRHGPDLVKGTLRLTNTAGEGDVKLDSKDGGLAPGQYVVFYKDEE 359 Query: 354 CLGGGIIEQ 362 CLG G+I + Sbjct: 360 CLGAGVISE 368 >UniRef50_D1XXK1 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase n=1 Tax=Prevotella bivia JCVIHMP010 RepID=D1XXK1_9BACT Length = 386 Score = 231 bits (590), Expect = 3e-59, Method: Compositional matrix adjust. Identities = 142/384 (36%), Positives = 203/384 (52%), Gaps = 37/384 (9%) Query: 6 KKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYCTAAADLADAQAVCDKL 65 KK+ V +SGGVDSSV W + G + ++K E+ C++ DL A AVC + Sbjct: 9 KKIAVLLSGGVDSSVVVWEFARLGLHPDCYYIKIGPEEAEAWDCSSEEDLEMATAVCRRF 68 Query: 66 GIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGADYIA 125 +L ++ EYW V + + + KAG TPNPD++CN+ IKF AF E + D IA Sbjct: 69 ECKLEVIDCHKEYWGQVTKYTMDKVKAGFTPNPDVMCNRLIKFGAFYEKKGYEY--DLIA 126 Query: 126 TGHYVRRADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQVRKIAEDL 185 TGHY + +DGK L D KDQ+ FL + Q+ +++FP+G EK +VR+IAE Sbjct: 127 TGHYAQTKWIDGKKWLCTSPDPVKDQTDFLAQIYDWQLQKAIFPIGHYEKNEVREIAERE 186 Query: 186 GLVTAKKKDSTGICFIGERKFREFLGRYLPAQPGKIITVD-GDEIGEHQGLMYHTLGQRK 244 L+ AK+KDS GICF+G + E++ RYL G+II ++ G +IGEH+GL +HT+GQRK Sbjct: 187 HLINAKRKDSQGICFLGNIDYNEYVRRYLGENAGEIIELETGKKIGEHKGLWFHTIGQRK 246 Query: 245 GLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLHWVDREPFTG-- 302 GLG+GG PW+V+ KDVE NIL V+ G++ LHW+ P Sbjct: 247 GLGLGGG------PWFVIKKDVEKNILYVSHGYDPETAYKRKFKVCDLHWLTVSPSELED 300 Query: 303 ----TMRCTVKTRYRQTDIPCTVK-----ALDDDRIEVIFDE---------------PVA 338 ++ + ++ T IP T K +EV+ +E + Sbjct: 301 SNGIILQNGCCSSFKHTLIPITFKIRHTPEYHQGYLEVLSEEGHLVEGSEALIHAQKKIH 360 Query: 339 AVTPGQSAVFYN--GEVCLGGGII 360 V PGQ V Y+ E C G G I Sbjct: 361 GVAPGQFCVIYDEEHERCFGSGEI 384 >UniRef50_Q5PBB1 tRNA-specific 2-thiouridylase mnmA n=21 Tax=cellular organisms RepID=MNMA_ANAMM Length = 387 Score = 231 bits (588), Expect = 4e-59, Method: Compositional matrix adjust. Identities = 138/362 (38%), Positives = 199/362 (54%), Gaps = 15/362 (4%) Query: 8 VIVGMSGGVDSSVSAWLLQQQGYQVEGLFMK--NWEEDDGEEYCTAAADLADAQAVCDKL 65 V+V MSGGVDSSV A LL ++GY+V G M+ + G + C + D+ DA+ V L Sbjct: 31 VVVAMSGGVDSSVVAALLHERGYKVIGATMQLHSSSPASGAKSCCGSVDIYDAKRVASTL 90 Query: 66 GIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGADYIA 125 G + +++ + V + F+ YK G TP P + CN+ +KF+ L+ AA +G D +A Sbjct: 91 GFPHYVLDYEEVFRREVIDDFINSYKRGETPIPCVKCNQTVKFRDMLK-AARAIGGDVVA 149 Query: 126 TGHYVRRADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQVRKIAEDL 185 TGHYVRR ++ G+ ++LRG D KDQSYFL++++ EQ+ FP+G+L K VR +A+ L Sbjct: 150 TGHYVRRVEIAGEQQILRGKDPQKDQSYFLFSVTSEQLKFLRFPLGDLAKSNVRLLAQQL 209 Query: 186 GLVTAKKKDSTGICFIGERKFREFLGRYLPA--QPGKIITVDGDEIGEHQGLMYHTLGQR 243 L A K DS ICF+ E +RE L PA + GKI+ VDG +GEH G+ T+GQR Sbjct: 210 NLEVADKPDSQDICFVPENSYREVLRNLDPASVKKGKIVHVDGRLLGEHDGISNFTVGQR 269 Query: 244 KGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLHWV-DREPFTG 302 +GL I P YVV D N +VV LM L + L+W+ D Sbjct: 270 RGLNISAPY-----PLYVVRLDAAQNTVVVG---PQSALMKRALFVKNLNWLPDYNIPKR 321 Query: 303 TMRCTVKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTPGQSAVFYNGEVCLGGGIIEQ 362 + + R + T+ + D V+ +E V+PGQ+ V Y+ E LGGG I Sbjct: 322 GLAVDARLRSSGATVRATITSDGDGYGTVVLEED-CVVSPGQACVLYDKERLLGGGWIYN 380 Query: 363 RL 364 +L Sbjct: 381 KL 382 >UniRef50_P75365 tRNA-specific 2-thiouridylase mnmA n=2 Tax=Mycoplasma RepID=MNMA_MYCPN Length = 370 Score = 230 bits (587), Expect = 6e-59, Method: Compositional matrix adjust. Identities = 140/371 (37%), Positives = 204/371 (54%), Gaps = 25/371 (6%) Query: 6 KKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEE------------DDGEEYCTAAA 53 K V VG+SGGVDS+VSA LL+QQ +V G+FM+ W+ ++ + C++ Sbjct: 4 KTVFVGISGGVDSAVSALLLKQQYREVIGIFMECWDNTLNNDQLGHRAFNEHKSGCSSKE 63 Query: 54 DLADAQAVCDKLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLE 113 D +AQA+ LGI+L N YW VF + +K G TPNPD+LCN+ IKF + Sbjct: 64 DFREAQAIAQLLGIKLIKQNLVEPYWKQVFLPTIDAFKNGLTPNPDMLCNRLIKFGLMRD 123 Query: 114 FAAE-DLGADYIATGHYVRRADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGE 172 + + D +D+ ATGHY + + + L D +KDQ+YFL + Q+ +FP+ Sbjct: 124 YCKQLDPNSDF-ATGHYAALSWDNNQPLLAIPKDKHKDQTYFLAHVKPAQLQDVVFPLAH 182 Query: 173 LEKPQVRKIAEDLGLVTAKKKDSTGICFIGERKFREFLGRYLPAQPGKIITVDGD-EIGE 231 L K +VR+IA A KKDSTGICFIGER F +FL YLP +PG I ++G Sbjct: 183 LLKTEVRQIALAHHFSVATKKDSTGICFIGERHFSDFLKNYLPVKPGVIYDWKTQRQLGS 242 Query: 232 HQGLMYHTLGQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQ 291 H+G+ ++T GQR GL +GG +VV+KD++ N L V+ E L G+ Sbjct: 243 HEGVWFYTTGQRSGLNLGGQAARN----FVVEKDLKTNTLYVSSDPE--DLQRRGITLSH 296 Query: 292 LHWVDREPFTGTMRCTVKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTPGQSAVFY-- 349 +W+ +P T V+ R+ Q + + ++ ++V D+P+ VT GQ V Y Sbjct: 297 FNWL-YQPNPLTQTVLVRIRHAQPLVQGHITVQPNNVVQVQLDQPIDRVTNGQYGVLYTQ 355 Query: 350 NGEVCLGGGII 360 NG +CLG GII Sbjct: 356 NG-ICLGSGII 365 >UniRef50_D1PXB9 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase n=1 Tax=Prevotella bergensis DSM 17361 RepID=D1PXB9_9BACT Length = 384 Score = 230 bits (587), Expect = 6e-59, Method: Compositional matrix adjust. Identities = 137/382 (35%), Positives = 202/382 (52%), Gaps = 35/382 (9%) Query: 6 KKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYCTAAADLADAQAVCDKL 65 K++ V +SGGVDSSV + L G + +++ E+ E C + D+ A AV + Sbjct: 9 KRIAVLLSGGVDSSVVVYELASHGLHPDCFYIRIGPEEKEEWDCNSEEDMEMATAVAKRF 68 Query: 66 GIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGADYIA 125 G +L V+ EYW V + + ++G TPNPD++CN+ IKF AF E A D D IA Sbjct: 69 GCKLQVVDCHQEYWSQVTRYTMEKVRSGFTPNPDVMCNRLIKFGAFDEKAGHDY--DLIA 126 Query: 126 TGHYVRRADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQVRKIAEDL 185 TGHY + +DG+ L D KDQ+ FL + Q+ +++FP+G EK +VR+IAE Sbjct: 127 TGHYAQTEWIDGRKWLTTSPDPVKDQTDFLAQIEGWQLKKAIFPIGHYEKNEVREIAERE 186 Query: 186 GLVTAKKKDSTGICFIGERKFREFLGRYLPAQPGKIITVD-GDEIGEHQGLMYHTLGQRK 244 L+ A++KDS GICF+G + E++ RYL QPG I+ ++ G +IGEH G +HT+GQRK Sbjct: 187 HLINARRKDSQGICFLGNIDYNEYVRRYLGEQPGDIVELETGTKIGEHSGHWFHTIGQRK 246 Query: 245 GLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLHWVDREPF-TGT 303 GLG+ G PW+V+ KDVE+N+L V+ G++ LHW+ EP Sbjct: 247 GLGLSGG------PWFVIKKDVEHNVLYVSHGYDPETAYKKDFKIHDLHWLTEEPTPPHH 300 Query: 304 MRCTVKTRYRQTDIPCTVK----------------ALDDDRIEVIFD-------EPVAAV 340 + +++ + IP T K A D E+ D + + V Sbjct: 301 LSEASESQKPGSYIPITFKIRHTPEYHPGYLDLNAASSSDHTELTGDTATIHSLDKIHGV 360 Query: 341 TPGQSAVFYNGE--VCLGGGII 360 PGQ V Y+ + C G G I Sbjct: 361 APGQFCVIYDEQHHRCFGSGEI 382 >UniRef50_C1EG18 Predicted protein (Fragment) n=2 Tax=Micromonas RepID=C1EG18_9CHLO Length = 346 Score = 230 bits (586), Expect = 8e-59, Method: Compositional matrix adjust. Identities = 139/352 (39%), Positives = 192/352 (54%), Gaps = 47/352 (13%) Query: 7 KVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNW---EEDDGEEYCTAAADLADAQAVCD 63 +V VG+SGGVDS+V+AWLL+ G+ V G+ M+NW EE GE C+ D DA+A Sbjct: 3 RVAVGLSGGVDSAVTAWLLKSAGFDVTGVLMRNWDEAEETGGE--CSFEKDQRDARAAAR 60 Query: 64 KLGIELHTVNFAAEYWDNVFELFLAEYKAG-RTPNPDILCNKEIKFKAFLEFAAEDLGAD 122 +GI L V+F EYW +VFE FL ++ G TPNPD+ CN+ IKF A L+ LGAD Sbjct: 61 AVGIPLTEVDFVKEYWHSVFEPFLRDFDGGGATPNPDLACNRHIKFGALLDHCLRSLGAD 120 Query: 123 YIATGHYVR--RADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQVRK 180 +ATGHY R R D RLLRG+D +KDQSYFL ++ E + ++ FP+G L K +VR+ Sbjct: 121 LLATGHYARIVRIDETNPPRLLRGIDPDKDQSYFLASVRGESLERACFPLGGLTKREVRE 180 Query: 181 IA---EDLGLVTAKKKDSTGICFIG-ERKFREFLGRYLPAQ------------------- 217 +A +L +++ S GICFIG +R F +F+ YLPA+ Sbjct: 181 LAAGPANLPAAVTRRRSSAGICFIGRKRDFGDFIQEYLPAEGEMRADSSRGDRRGEDSSR 240 Query: 218 --PGKIITVD-GDEIGEHQGLMYHTLGQRKGLGIGGTKEGTEEPWYVVDKDVE--NNILV 272 G ++V+ G+ +G H GL +T GQR LG G PWYVV KD +N + Sbjct: 241 GASGSFVSVESGEAVGRHGGLARYTCGQRARLG------GASVPWYVVGKDSRGGSNSVY 294 Query: 273 VAQGHEHPRLMSVGLIAQQLHWVDREPFTGT-----MRCTVKTRYRQTDIPC 319 VA G +HP L + + WV G + + +TRY + C Sbjct: 295 VAPGADHPALFTTSAAITRCFWVSGARPRGMDTDRGAKLSAQTRYGARAVSC 346 >UniRef50_B4D711 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D711_9BACT Length = 363 Score = 229 bits (585), Expect = 1e-58, Method: Compositional matrix adjust. Identities = 137/365 (37%), Positives = 198/365 (54%), Gaps = 21/365 (5%) Query: 12 MSGGVDSSVSAWLLQQQGYQVEGLFMKNWEED---DGEEYCTAAADLADAQAVCDKLGIE 68 MSGGVDSSV+A+LL++QGY V G+ MK W +D E+ C +ADA+ V LG+ Sbjct: 1 MSGGVDSSVAAYLLKRQGYDVVGVTMKVWPQDCISRAEDKCCGPQAIADARGVAHALGVP 60 Query: 69 LHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGADYIATGH 128 + V+ + V + F EYK GRTPNP ++CN+++KF L A+ LGA+YIATGH Sbjct: 61 HYVVDEGENFERLVIDYFTEEYKNGRTPNPCVMCNEKVKF-GNLWGKAKALGAEYIATGH 119 Query: 129 YVRRADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQVRKIAEDLGLV 188 Y ++ L +G D KDQSYFL++L Q+ ++ P+GE+ KP++R IA LGL Sbjct: 120 YAIIEHHADRAVLRKGRDPRKDQSYFLFSLRQAQLQHAICPLGEMSKPEIRAIARQLGLK 179 Query: 189 TAKKKDSTGICFIGERKFREFLGRYLPA---QPGKIITVDGDEIGEHQGLMYHTLGQRKG 245 A+K+DS ICF+ ++ FL ++ A PG I G+ + EH+G+ T+GQRKG Sbjct: 180 VAEKEDSQEICFVPGNDYKAFLKSHMGAGEFHPGGIYDKAGNRLAEHEGIEMFTIGQRKG 239 Query: 246 LGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLHWVDREPF----- 300 L G+ P YV+D D + ++V + L++ W Sbjct: 240 L-----PGGSPRPRYVIDIDPVTSSVIVGDAED---LITGEFTIDHCMWHPSTSLRAGGS 291 Query: 301 -TGTMRCTVKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTPGQSAVFYNGEVCLGGGI 359 T VK RY TV ++ V +P AVTPGQ+AV Y G+ LGGG Sbjct: 292 ATEPFEVNVKIRYGHAGADATVYPGENGEARVRLHKPQRAVTPGQAAVCYRGDEVLGGGW 351 Query: 360 IEQRL 364 I +++ Sbjct: 352 IVRQM 356 >UniRef50_A6LIF1 tRNA-specific 2-thiouridylase mnmA n=28 Tax=Bacteroidales RepID=MNMA_PARD8 Length = 358 Score = 229 bits (584), Expect = 1e-58, Method: Compositional matrix adjust. Identities = 134/357 (37%), Positives = 198/357 (55%), Gaps = 18/357 (5%) Query: 12 MSGGVDSSVSAWLLQQQGYQVEGLFMK-NWEEDDGEEYCTAAADLADAQAVCDKLGIELH 70 +SGGVDSSV L++ GY +++ E+ DG C A D+ + K G Sbjct: 7 VSGGVDSSVVVHQLKEAGYDPTIFYIRIGMEDKDGYIDCPAEEDIEITSYIARKYGCRFE 66 Query: 71 TVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGADYIATGHYV 130 V+ EYWD V + K G TPNPD++CNK IKF F E +D D IATGHY Sbjct: 67 IVSLHDEYWDRVVSYTIESVKRGLTPNPDMMCNKYIKFGCFEEKWGKDF--DKIATGHYA 124 Query: 131 RRADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQVRKIAEDLGLVTA 190 ++DGK+ L D KDQ+ FL ++ QI + +FP+G L K +VR IAE L +A Sbjct: 125 TTTEIDGKTWLSTAKDPVKDQTDFLGQITRLQIQKLMFPIGHLMKSEVRAIAEAQKLPSA 184 Query: 191 KKKDSTGICFIGERKFREFLGRYLPAQPGKIITVD-GDEIGEHQGLMYHTLGQRKGLGIG 249 K+KDS GICF+G+ + +F+ RYL +PGKI+ ++ G +G+H G +HT+GQRKGLG+ Sbjct: 185 KRKDSQGICFLGKINYNDFIERYLGKRPGKIVELETGKVLGKHNGYWFHTIGQRKGLGLS 244 Query: 250 GTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLHWVDREP---FTGTMRC 306 G PW+V+ KD++ NI+ V+ G++ + Q ++ +P F G Sbjct: 245 GG------PWFVIQKDIKRNIIYVSNGYDPETQYGKVINMQGFDFITEDPWGEFEGEKEI 298 Query: 307 TVKTRYRQTDIPCTVKALDD-DRIEVIFDEPVAAVTPGQSAVFYNGE--VCLGGGII 360 T K R+ ++ + D R+E DE + + PGQ +V Y+ + +CLG G+I Sbjct: 299 TFKIRHTPEFTHGYIRRIGDLYRVES--DEKIQGIAPGQYSVIYDKDHHLCLGSGMI 353 >UniRef50_B8FEQ6 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase n=1 Tax=Desulfatibacillum alkenivorans AK-01 RepID=B8FEQ6_DESAA Length = 356 Score = 229 bits (583), Expect = 2e-58, Method: Compositional matrix adjust. Identities = 134/363 (36%), Positives = 199/363 (54%), Gaps = 13/363 (3%) Query: 5 AKKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYCTAAADLADAQAVCDK 64 A ++ + MSGGVDS +SA+LL+Q + G+ E++G A+A + Sbjct: 2 ASRIAIAMSGGVDSMISAYLLKQTCRDMVGIHFITGFENEGAPPGPDGVPEPLARA-SKE 60 Query: 65 LGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGADYI 124 L + + VN E+ +V F+ Y GRTPNP ++CN+ +KF A L+ A A+ I Sbjct: 61 LDLPIEVVNLQEEFHTHVVAPFVDTYLKGRTPNPCMVCNRTVKFGALLDAARNRFNAEKI 120 Query: 125 ATGHYVR-RADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQVRKIAE 183 ATGHY R R D G+ RL++G D KDQSYFL LS Q+ ++FP+GE K Q+R+ A Sbjct: 121 ATGHYARVRPDSAGRFRLVKGADLKKDQSYFLGFLSQAQLGAAVFPLGEFTKDQIREKAV 180 Query: 184 DLGLVTAKKKDSTGICFIGERKFREFLGRY--LPAQPGKIITVDGDEIGEHQGLMYHTLG 241 +LGL K +S CFI + ++R+FL P++PG ++ V G+ IG HQG+ T+G Sbjct: 181 ELGLDKYTKPESQETCFIADDRYRDFLQNQPGFPSRPGDVVNVQGEVIGRHQGVFAFTIG 240 Query: 242 QRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLHWVDREPFT 301 QR+G+ I + E +YV D N + V L+S G+ ++W+ P Sbjct: 241 QRRGINIPAS-----EAYYVQAIDPAANRITVCFKSG---LLSRGVHVGGVNWI-VPPQK 291 Query: 302 GTMRCTVKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTPGQSAVFYNGEVCLGGGIIE 361 + RYR + ++ L+D + V FDEP +AVTPGQ AVFY + LG G I+ Sbjct: 292 NAFEAATRIRYRHKEAASAIEVLEDGTVNVWFDEPQSAVTPGQGAVFYQEDEVLGAGWID 351 Query: 362 QRL 364 + L Sbjct: 352 KPL 354 >UniRef50_Q2LWA6 tRNA-specific 2-thiouridylase mnmA 1 n=1 Tax=Syntrophus aciditrophicus SB RepID=MNMA1_SYNAS Length = 372 Score = 228 bits (581), Expect = 3e-58, Method: Compositional matrix adjust. Identities = 135/361 (37%), Positives = 208/361 (57%), Gaps = 15/361 (4%) Query: 6 KKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFM-KNWEEDDGEEYCTAAADLADAQAVCDK 64 K+V++ +SGGVDSSV+A LL+++GY+V G+ M E++ + C + DA+ VC+ Sbjct: 21 KRVLLAISGGVDSSVAALLLKEEGYEVAGVTMCLGVREEENKVRCCGREAIEDARGVCEI 80 Query: 65 LGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGADYI 124 LGI + +++A V + F+ EY+ GRTPNP I CN+ +KF L+ +A +G DY+ Sbjct: 81 LGIPHYVLDYAPLLETCVIDKFVREYRLGRTPNPCIDCNRYLKFGHLLD-SARTMGFDYL 139 Query: 125 ATGHYVRRADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQVRKIAED 184 ATGHY + + + L + D KDQ+YFLY + + LFP+ + K +VR+IA Sbjct: 140 ATGHYAKIERKESRWILKKAKDLVKDQTYFLYPIPVAALEHILFPLADRTKDEVREIARQ 199 Query: 185 LGLVTAKKKDSTGICFIGERKFREFLGRY-LPAQPGKIITVDGDEIGEHQGLMYHTLGQR 243 L A+K +S +CF+ + +R+FL P PG I+ G +GEH G +++T+GQR Sbjct: 200 ALLPIAEKPESQDLCFVTQDSYRDFLQEQGCPVHPGPIVDRSGRVLGEHSGTVFYTIGQR 259 Query: 244 KGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLHWVDREPFTGT 303 GLGI + P YVV DV N ++V+ G E + + GL+A +++W+ E Sbjct: 260 HGLGI-----SSPFPLYVVAIDVAGNSVIVS-GKED--VYAQGLVAGEMNWLTPE---RP 308 Query: 304 MRCTVKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTPGQSAVFYNGEVCLGGGIIEQR 363 + R+R+ C + + DRI V F E AVTPGQ+ V Y + LGGG+IE+ Sbjct: 309 QEAEARIRHRKRTCSCRI-VPEGDRIRVYFAEDQDAVTPGQAVVLYQEDEVLGGGVIEEA 367 Query: 364 L 364 L Sbjct: 368 L 368 >UniRef50_A6KZV1 tRNA-specific 2-thiouridylase mnmA 3 n=23 Tax=Bacteroides RepID=MNMA3_BACV8 Length = 375 Score = 226 bits (577), Expect = 8e-58, Method: Compositional matrix adjust. Identities = 136/370 (36%), Positives = 199/370 (53%), Gaps = 22/370 (5%) Query: 1 MSETAKKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYCTAAADLAD--- 57 M+ K+V+VGMSGG+DSS + +LQ+QGY+V G+ M+ W D + T D D Sbjct: 1 MNNRDKRVLVGMSGGIDSSATCIMLQEQGYEVVGVTMRTW--DVPSRFSTPGQDEPDDVL 58 Query: 58 -AQAVCDKLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAA 116 A+A+ ++LGIE H + E+ + + F+ EY GRTPNP +LCN K + E+A Sbjct: 59 EARALAERLGIEHHVADVRKEFKQIIVKHFIDEYMQGRTPNPCVLCNPLFKERILCEWA- 117 Query: 117 EDLGADYIATGHYVRRADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKP 176 + +I+TGHY R + GK ++ G D KDQSYFL+ L E + + LFP+G K Sbjct: 118 DQTNCAHISTGHYCRLEERKGKLYIVAGDDQTKDQSYFLWKLPQEILQRFLFPLGTYTKQ 177 Query: 177 QVRKIAEDLGL-VTAKKKDSTGICFIGERKFREFLGRYLP-----AQPGKIITVDGDEIG 230 +VR+ G A+ +S ICFI E +R FL P PG + G +IG Sbjct: 178 EVREYLRQKGFEAKARGGESMEICFI-EGDYRNFLRSQCPDIDTQVGPGWFVNSKGVKIG 236 Query: 231 EHQGLMYHTLGQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQ 290 +H+G Y+T+GQRKGL I P YV+ + E N +++ E L + ++ + Sbjct: 237 QHKGFPYYTIGQRKGLEI-----ALGHPAYVLRINAEKNTVMLGDAEE---LKAEYMLVE 288 Query: 291 QLHWVDREPFTGTMRCTVKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTPGQSAVFYN 350 H + + +V+ RYR IPC V LD+ ++ V F +A+ PGQSAVFY Sbjct: 289 DYHITEMQDLLQCKDLSVRIRYRSKPIPCQVLVLDEKQLLVRFLSEASAIAPGQSAVFYE 348 Query: 351 GEVCLGGGII 360 G+ LGG I Sbjct: 349 GKRVLGGAFI 358 >UniRef50_C0QRH5 tRNA-specific 2-thiouridylase mnmA n=8 Tax=Aquificales RepID=MNMA_PERMH Length = 353 Score = 224 bits (570), Expect = 5e-57, Method: Compositional matrix adjust. Identities = 132/360 (36%), Positives = 209/360 (58%), Gaps = 15/360 (4%) Query: 7 KVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMK--NWEEDDGEEYCTAAADLADAQAVCDK 64 +V VGMSGGVDSSV+A LL+++GY V G+ +K + + + C + D+ DA+ V Sbjct: 2 RVAVGMSGGVDSSVAALLLKEKGYDVIGVTLKLSSIVCSNDIQVCCSPQDIKDAKRVASY 61 Query: 65 LGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGADYI 124 LGIE + +++ + + V F+ EYK G+TPNP +CN+E+K +F LGAD Sbjct: 62 LGIEHYVIDWEDIFREKVINYFVEEYKKGKTPNPCSVCNREVKTGRLAKFVNIVLGADKF 121 Query: 125 ATGHYVRRAD--VDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQVRKIA 182 ATGHY++ D V GK + RG D KDQSYF+ L + + +FP+ +L K +VRKIA Sbjct: 122 ATGHYIKIEDHPVYGKV-IKRGSDIKKDQSYFMALLERDVLDLLIFPLSDLTKEEVRKIA 180 Query: 183 EDLGLVTAKKKDSTGICFIGERKFREFL--GRYLPAQPGKIITVDGDEIGEHQGLMYHTL 240 ED + ++KK+S ICF + E+L L + G I+ +DG +G+H+GL ++T+ Sbjct: 181 EDYKIPVSQKKESFEICFTAGKTPAEYLLENNLLAFESGDIVHIDGKTVGKHKGLPFYTV 240 Query: 241 GQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLHWVDREPF 300 GQR+GLG+ EP YV++KD E N +VV E +L++ + ++ +++ Sbjct: 241 GQRRGLGV-----RWREPLYVIEKDAERNTVVVG---EREKLLTDHVSSEDFNFLVPVEK 292 Query: 301 TGTMRCTVKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTPGQSAVFYNGEVCLGGGII 360 +V+ RYRQ + +++ +R+ F++P GQ Y+G++ LGGGII Sbjct: 293 WKKEGLSVQGRYRQKAVKIKDVSIEGNRLTAYFEKPEERFAKGQVLAVYDGDILLGGGII 352 >UniRef50_Q3Z8D8 tRNA-specific 2-thiouridylase mnmA n=5 Tax=Dehalococcoides RepID=MNMA_DEHE1 Length = 357 Score = 223 bits (569), Expect = 6e-57, Method: Compositional matrix adjust. Identities = 139/366 (37%), Positives = 202/366 (55%), Gaps = 18/366 (4%) Query: 1 MSETAKKVIVGMSGGVDSSVSAWLLQQQGYQVEG--LFMKNWEEDDGEEYCTAAADLADA 58 M++T++ ++V MSGGVDSSV+A LL +QGY V G L +K+ E G Y + A Sbjct: 1 MNDTSELIMVAMSGGVDSSVAAMLLLEQGYDVAGVSLQLKSNNEPYGNGYNLKLIN--RA 58 Query: 59 QAVCDKLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAED 118 + V LGI + V+ + + V F +Y GRTPNP I CN +K A LE D Sbjct: 59 REVAAALGIPHYVVDLSDIFSQRVIADFCQQYSQGRTPNPCIRCNYYVKIGALLE-KIPD 117 Query: 119 LGADYIATGHYVRRADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQV 178 A Y+ATGHY R + + LL+G D KDQSYFLYTL E +++ +FP+G+ K + Sbjct: 118 FNAGYLATGHYARVLSDENGTHLLKGADEKKDQSYFLYTLPPESLSRLIFPLGKRYKKDI 177 Query: 179 RKIAEDLGLVTAKKKDSTGICFIGERKFREFLGRYLPAQPGKIITVDGDEIGEHQGLMYH 238 ++A+ + L + +K+S +CFI + ++ FL + PGKI+ G +GEHQGL + Sbjct: 178 IRLADKMKLPVS-QKESQDVCFIPDGDYKSFLATRMGFTPGKILDKTGKILGEHQGLPLY 236 Query: 239 TLGQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLHWVDRE 298 T+GQR+GLG+ + E +V D + E N ++VA H +L + ++ W + Sbjct: 237 TIGQRQGLGL-----ASNEKLFVSDMNPEANTIMVA---SHDQLYTSRILLSNFIWRESR 288 Query: 299 PFTGTMRCTVKTRYRQTDIPCTVKALDD--DRIEVIFDEPVAAVTPGQSAVFYNGEVCLG 356 T VK RY+ P VK + D + PV A TPGQ+AV Y G++ LG Sbjct: 289 IPLDTPGMIVKVRYKAA--PAEVKKISQTGDFYLLELASPVWAATPGQAAVIYLGDMVLG 346 Query: 357 GGIIEQ 362 GGIIE Sbjct: 347 GGIIEH 352 >UniRef50_B1GZY9 tRNA-specific 2-thiouridylase mnmA n=2 Tax=Elusimicrobia RepID=MNMA_UNCTG Length = 360 Score = 222 bits (566), Expect = 1e-56, Method: Compositional matrix adjust. Identities = 134/370 (36%), Positives = 204/370 (55%), Gaps = 24/370 (6%) Query: 3 ETAKKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWE------EDDGEEYCTAAAD-- 54 ET K+++G+SGGVDS+V+A+LL++QGY+V G M W+ + + C + Sbjct: 2 ETEMKILIGLSGGVDSAVAAYLLKKQGYEVTGTTMSIWDNFLPAPKTKVNDSCLGPENEN 61 Query: 55 LADAQAVCDKLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEF 114 + A + D L I L+ + + EY V E F EYK GRTPNP I CN IKF L Sbjct: 62 IETAHKIADFLTIPLYVTDCSGEYKKVVLENFRNEYKEGRTPNPCIRCNAYIKF-GILPA 120 Query: 115 AAEDLGA--DYIATGHYVRRA--DVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPV 170 A + G D ATGHY +L + D NKDQ+YFLY L+ + +++++FP+ Sbjct: 121 AVKKTGLSFDKFATGHYANIGFDSSTNMYKLYKAADLNKDQTYFLYRLTQKTLSETIFPL 180 Query: 171 GELEKPQVRKIAEDLGLVTAKKKDSTGICFIGERKFREFLGRYLPAQPGKIITVDGDEIG 230 G K QVR IA+ +GL +A+K DS + G+ + + L PA PG I+ +G +G Sbjct: 181 GIYTKEQVRNIAKKIGLPSAEKPDSQDF-YCGD--YNDIL--QFPANPGNIVDKNGRVLG 235 Query: 231 EHQGLMYHTLGQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQ 290 +H G+ +T+G+RKGLG+ G GT++P YV++ + N++ + + L S L A+ Sbjct: 236 KHNGIWNYTIGKRKGLGLLG---GTKDPLYVINISAKQNMVTIGTKED---LYSSSLTAK 289 Query: 291 QLHWVDREPFTGTMRCTVKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTPGQSAVFYN 350 ++ W P T+ T K R + + +D ++V F +P +VT GQS VFY Sbjct: 290 KVSWCSILPPKKTIEATAKIRRQHKPEKAFIIPQEDSSVKVEFAQPQMSVTAGQSIVFYK 349 Query: 351 GEVCLGGGII 360 + LGGG+I Sbjct: 350 DDTVLGGGVI 359 >UniRef50_A0LEL7 tRNA-specific 2-thiouridylase mnmA n=1 Tax=Syntrophobacter fumaroxidans MPOB RepID=MNMA_SYNFM Length = 362 Score = 222 bits (566), Expect = 2e-56, Method: Compositional matrix adjust. Identities = 140/372 (37%), Positives = 199/372 (53%), Gaps = 23/372 (6%) Query: 3 ETAKKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYCTAAADLADAQAVC 62 E + +V V MSGGVDS +A LL++QG V G+ M++ +C A +C Sbjct: 2 ERSLRVAVAMSGGVDSLRAAILLKEQGNDVFGVHMRHVPPSRTGRWCAGAMIREKEAFLC 61 Query: 63 D---KLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDL 119 + + G + V+ + +V E F+ Y G+TPNP I CN +KF FL A L Sbjct: 62 ELGLRFGFPIAVVDLRDAFESHVIEPFMEAYLLGQTPNPCIFCNPAVKF-GFLMEKARAL 120 Query: 120 GADYIATGHYVRRADVDGKSR---LLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKP 176 GA+ ATGHY R + SR LLRG D +KDQSYFLY LS +Q+A +LFP+G K Sbjct: 121 GAERFATGHYARVSPPGPTSRRFRLLRGSDLSKDQSYFLYGLSQDQLASTLFPLGSTRKR 180 Query: 177 QVRKIAEDLGLVTAKKKDSTGICFIGERKFREFLGRYL-----PAQPGKIITVDGDEIGE 231 V A LG+ + +S ICF+ K+ EFL L PA+ G I+ ++G E+G Sbjct: 181 DVSAWAGQLGIASLFPGESQEICFVPAGKYHEFLTERLDTLHAPAE-GPILDLEGRELGR 239 Query: 232 HQGLMYHTLGQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPR-LMSVGLIAQ 290 H+G+ +T+GQR+GLGI + P YVV + N + V + + R + VG Sbjct: 240 HKGIFAYTIGQRRGLGI-----ASSAPLYVVGLEPAANAVRVGRVGDLDRDRLEVG---- 290 Query: 291 QLHWVDREPFTGTMRCTVKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTPGQSAVFYN 350 +++WV +RC V+ R + V + + V F+ P AVTPGQSAVFY+ Sbjct: 291 RVNWVSIPAPNVPVRCRVRIRNQHAPAAAVVTPVGERSASVRFEAPQRAVTPGQSAVFYD 350 Query: 351 GEVCLGGGIIEQ 362 G+V LGGG I + Sbjct: 351 GDVVLGGGTISK 362 >UniRef50_A6KZ28 tRNA-specific 2-thiouridylase mnmA 2 n=10 Tax=Bacteroides RepID=MNMA2_BACV8 Length = 351 Score = 222 bits (565), Expect = 2e-56, Method: Compositional matrix adjust. Identities = 133/366 (36%), Positives = 204/366 (55%), Gaps = 26/366 (7%) Query: 2 SETAKKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYCTAAADLADAQAV 61 +E+ KV++GMSGG DSSV+A LLQ GY+V G+ + +E+++ EY L DA+A+ Sbjct: 4 TESNNKVLLGMSGGTDSSVAALLLQDAGYEVTGITFRFYEKENDTEY------LEDARAL 57 Query: 62 CDKLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGA 121 C++L I T + + + + F+ EY AG TP P LCN +K+ L+ ++++G Sbjct: 58 CERLNIPHLTYDVRDTFRKTIIDYFINEYMAGHTPVPCTLCNNYLKW-PLLKKISDEMGI 116 Query: 122 DYIATGHYVRRADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQVRKI 181 + ATGHYVRR ++G + G+D +KDQS+FL+ L E + + L P+G L K +VR+I Sbjct: 117 YHFATGHYVRRRFINGCYHITTGVDPDKDQSFFLWGLPQEILQRMLLPMGNLTKARVREI 176 Query: 182 AEDLGLV-TAKKKDSTGICFIGERKFREFLGRYLP---AQPGKIITVDGDEIGEHQGLMY 237 A + G + A K+DS G+CF +R FL + LP PGK G+ I H+G + Sbjct: 177 AAERGFLKAAHKRDSLGVCFC-PMDYRTFLHKELPEGSILPGKFFDEMGNFIARHKGYPF 235 Query: 238 HTLGQRKGLGIGGTKEGTEEPWYVVDKDV---ENNILVVAQGHEHPRLMSVGLIAQQLHW 294 +T+GQR+GLGI + V K++ EN +++ + L + ++ H Sbjct: 236 YTIGQRRGLGIDLNRA-------VFVKEIIPAENKVIL----SDLKALEKTEMRLKEWHI 284 Query: 295 VDREPFTGTMRCTVKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTPGQSAVFYNGEVC 354 + VK RYR+ CTV D+ + V EP+ A+ PGQ+A FY +V Sbjct: 285 TNPALLLNKDDIIVKIRYRKQANRCTVTLQPDNTLHVQLHEPLTAIAPGQAAAFYRDDVV 344 Query: 355 LGGGII 360 LGGGII Sbjct: 345 LGGGII 350 >UniRef50_D2MI59 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase n=1 Tax=Candidatus Poribacteria sp. WGA-A3 RepID=D2MI59_9BACT Length = 372 Score = 220 bits (560), Expect = 8e-56, Method: Compositional matrix adjust. Identities = 137/359 (38%), Positives = 192/359 (53%), Gaps = 19/359 (5%) Query: 12 MSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYCT------AAADLADAQAVCDKL 65 MSGGVDSSV+A LL +QGY V+G+ ++ WE +D T + A+ V +L Sbjct: 1 MSGGVDSSVAALLLTEQGYDVQGVTLQVWEPEDDNAAVTKKWEERGCCKVGLARHVAGRL 60 Query: 66 GIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGADYIA 125 GI V+ + NV + F+A Y G TPNP + CN+ +KF E A +D G D++A Sbjct: 61 GIPHEVVDTRETFRKNVIDDFVAGYLGGTTPNPCVRCNEWVKFGGLYELA-KDRGIDFVA 119 Query: 126 TGHYVRRADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQVRKIAEDL 185 TGHY R VD L RG D KDQSYFLY L + LFPVG L+K +V AE+L Sbjct: 120 TGHYARVVPVDEGVGLFRGADGKKDQSYFLYRLPAAWLPHILFPVGHLQKTEVWARAEEL 179 Query: 186 GLVTAKKKDSTGICFIGERKFREFLGRYLPA--QPGKIITVDGDEIGEHQGLMYHTLGQR 243 L + K+S ICF+ + +R FL P +PG + +G +IGEH+G+ ++T GQR Sbjct: 180 DLPADEMKESQEICFVTQGDYRTFLTEEAPQALRPGPFLDPEGRKIGEHRGIAFYTPGQR 239 Query: 244 KGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLHWV-DREPFTG 302 KGLGI E YV + + E N +V+ + + R Q ++W+ D P T Sbjct: 240 KGLGI-----ARGERLYVKEVNPETNAVVLGRAEDLSRQTCT---VQDVNWLADTLPET- 290 Query: 303 TMRCTVKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTPGQSAVFYNGEVCLGGGIIE 361 +K RY + V+ + + F EP A++PGQS V Y + LGGGII+ Sbjct: 291 LDHVAIKYRYASPAVSGQVQPHTAGTLSIEFKEPQQALSPGQSLVLYQADRVLGGGIIQ 349 >UniRef50_C4QX90 tRNA-specific 2-thiouridylase, responsible for 2-thiolation of the wobble base of mitochondrial tRNA n=1 Tax=Pichia pastoris GS115 RepID=C4QX90_PICPG Length = 398 Score = 219 bits (558), Expect = 1e-55, Method: Compositional matrix adjust. Identities = 125/379 (32%), Positives = 200/379 (52%), Gaps = 31/379 (8%) Query: 7 KVIVGMSGGVDSSVSAWLLQQ--QGYQVEGLFMKNWEEDDGEEYCTAAADLADAQAVCDK 64 +++V MS GVDSSV+A L ++ +VEG+FM NW D CT + D D + C Sbjct: 25 RIVVAMSSGVDSSVTAALCRKIFPRSEVEGIFMANWTSDSN---CTDS-DWNDVKKTCSH 80 Query: 65 LGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGAD-- 122 +GI V+F EYW VFE L +Y+ G+TPNPD+ CN+ +KF +E LG Sbjct: 81 IGIPCRRVDFEKEYWTEVFEPMLEQYRIGKTPNPDVGCNRYVKFGKMIEHLTNTLGEQQP 140 Query: 123 -YIATGHYVR-RADVDGKSR-LLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQVR 179 ++ TGHY R D+ + + LLR KDQSY+L + + + P+G KP++R Sbjct: 141 WWLVTGHYARVLEDITSREKHLLRSDYLPKDQSYYLSRVKDSSLERMFLPIGHFSKPEIR 200 Query: 180 KIAEDLGLVTAKKKDSTGICFIGERK--FREFLGRYLPAQPGKIITVDGD----EIGEHQ 233 +A+ L T+ K DS G+CF+ +++ F++FL +LP +PG IIT+D + + G HQ Sbjct: 201 NLAKKWKLPTSSKPDSQGLCFVSQKEGHFKKFLDEFLPPEPGDIITIDENGFKHKWGSHQ 260 Query: 234 GLMYHTLGQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLH 293 GL + T+GQR G+ + + W+V +K + N +V+ +G +P L + Sbjct: 261 GLWHATIGQRSGVSMPQGDRNYKGAWFVSEKRPKTNEIVIVKGSNNPALYKDTVETSNWL 320 Query: 294 WVDREPFTGTMRCTVK-----TRYRQTDIPCTV-------KALDDDRIEVIFDEPVAAVT 341 W+ PF + +YR P + +++++ R+ + A++ Sbjct: 321 WLG--PFNADNLKNISINELIVQYRSLQDPIGLLNWKFFSQSINNQRMTFRLKQKYRAIS 378 Query: 342 PGQSAVFYNGEVCLGGGII 360 PGQ AV Y+ + LG G+I Sbjct: 379 PGQIAVLYHRDRVLGCGMI 397 >UniRef50_Q54I63 Mitochondrial tRNA-specific 2-thiouridylase 1 n=1 Tax=Dictyostelium discoideum RepID=MTU1_DICDI Length = 451 Score = 219 bits (557), Expect = 1e-55, Method: Compositional matrix adjust. Identities = 128/387 (33%), Positives = 201/387 (51%), Gaps = 41/387 (10%) Query: 7 KVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYCTAAADLADAQAVCDKLG 66 KV +GMSGGVDS+++A LL+ QG+ V G+F+K+W+E + C D DA + L Sbjct: 66 KVCIGMSGGVDSTITAKLLKLQGFDVTGVFIKSWDEVEDTGRCQGERDWKDALEASNFLD 125 Query: 67 IELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGADYIAT 126 I ++ +F +YW+ VF FL +YK G TPNPD+ CN+EIKF F +FA E+ G DYIAT Sbjct: 126 IPMYKADFVKDYWNRVFVDFLKDYKNGLTPNPDVWCNREIKFDLFFDFAKENFGVDYIAT 185 Query: 127 GHYVR----RADVDGKS----RLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQV 178 GHY +V + +L R +D NKDQ++FL E++ Q++FP+G K + Sbjct: 186 GHYSNLYYGEENVGDNNNNNLQLHRAIDKNKDQTFFLCMTKGERLKQAIFPIGGFTKENI 245 Query: 179 RKIAEDLGLVT--AKKKDSTGICFIGERKFREFLGRYLPAQPGKIITVDGDEI---GEHQ 233 A+ + + KK S GICFIG+R +FL +Y+ +PG + + +H+ Sbjct: 246 VSFAKTIPNFSKITSKKSSRGICFIGKRPLPDFLSQYMTLKPGDFFDISTNSFIKGKKHK 305 Query: 234 GLMYHTLGQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRL-MSVGLIAQQL 292 G + +T+GQ+ + + E +++V D+E NI+ V + + + Sbjct: 306 GSVCYTMGQKANI------DSLSERYFIVRSDIERNIVYVCPESQFDQFSLYYEFNTHSF 359 Query: 293 HWVDREP--------FTGTMRCTVKTRYRQTDIPCTVK------ALDDDRI-EVIFDEPV 337 +W++ P F G C R+R + T+K +D I V D+P+ Sbjct: 360 NWINEIPTEVKSEQGFKGRGIC----RHRGDVVNLTIKDTGKTSPIDGSVIYSVNLDQPL 415 Query: 338 AAVTPGQSAVFY--NGEVCLGGGIIEQ 362 +V GQ + N + C GGG+I Sbjct: 416 RSVASGQILCLFDRNTDRCFGGGVINS 442 >UniRef50_Q12093 Mitochondrial tRNA-specific 2-thiouridylase 1 n=10 Tax=Saccharomycetaceae RepID=MTU1_YEAST Length = 417 Score = 218 bits (556), Expect = 2e-55, Method: Compositional matrix adjust. Identities = 137/383 (35%), Positives = 196/383 (51%), Gaps = 28/383 (7%) Query: 7 KVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEE-----DDGEEYCTAAADLADAQAV 61 VIV MS GVDSSV+A L + G++M+NW E D G+E C D D V Sbjct: 28 NVIVAMSSGVDSSVAAALFAGEFPNTRGVYMQNWSESQSLDDPGKEPC-YERDWRDVNRV 86 Query: 62 CDKLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGA 121 L I + VNF +YW +VFE L Y G TPNPDI CNK +KF E+ E G Sbjct: 87 AKHLNIRVDKVNFEQDYWIDVFEPMLRGYSEGSTPNPDIGCNKFVKFGKLREWLDEKYGT 146 Query: 122 D--YIATGHYVR-RADVDGKS--RLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKP 176 ++ TGHY R +++GK LLR + KDQSY+L ++ ++ L P+G L KP Sbjct: 147 GNYWLVTGHYARVMQEMNGKGLFHLLRSIYRPKDQSYYLSQINSTVLSSLLLPIGHLTKP 206 Query: 177 QVRKIAEDLGLVTAKKKDSTGICFIGER---KFREFLGRYLPAQPGKIITVDGDE----- 228 +VR +A+ GL TA+K DS GICF+ KF+ FL YLP+ PG IITVD Sbjct: 207 EVRDLAKYAGLPTAEKPDSQGICFVNNSQHGKFKNFLKHYLPSSPGDIITVDPQSGAKTT 266 Query: 229 IGEHQGLMYHTLGQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLI 288 G H GL +T+GQ+ G+ + + W+V +K + N +++ +G ++P L S + Sbjct: 267 WGRHDGLWSYTIGQKVGISMPQADPNYQGTWFVSEKLRDTNEILIVRGRDNPALYSDTMR 326 Query: 289 AQQLHWV-DREPFTGTMRCT--VKTRYRQTDIPCTVKALDDDR------IEVIFDEPVAA 339 + + RE + T + ++R +P +K+ +R I + A Sbjct: 327 IENFSSLGPREDTINAFQNTGALTLQFRSLQVPVQIKSCKLNRSADNLDITIHLASKQRA 386 Query: 340 VTPGQSAVFYNGEVCLGGGIIEQ 362 +TPGQS Y + LG G I Sbjct: 387 ITPGQSCCLYIDDRVLGSGPISH 409 >UniRef50_D2QHY9 tRNA(5-methylaminomethyl-2-thiouridylate)-methyl transferase n=1 Tax=Spirosoma linguale DSM 74 RepID=D2QHY9_9SPHI Length = 391 Score = 218 bits (556), Expect = 2e-55, Method: Compositional matrix adjust. Identities = 125/366 (34%), Positives = 203/366 (55%), Gaps = 22/366 (6%) Query: 7 KVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDG-----EEYCTAAADLADAQAV 61 +++V MSGG+DSS++A +L ++GY+V G+ MK W+ E C + + DA+ + Sbjct: 6 RILVAMSGGIDSSLAAVMLHEEGYEVIGMTMKTWDYASSGGTKKETGCCSLDSINDARNI 65 Query: 62 CDKLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGA 121 LG + ++ E+ D V + F EY GRTPNP ++CN IK+ A L A+ L Sbjct: 66 AVSLGFPHYILDIREEFGDAVIDHFTGEYLEGRTPNPCVMCNTHIKWDALLR-RADRLDC 124 Query: 122 DYIATGHYVRRADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQVRKI 181 + IATGHY + +G+ L +G+D+ KDQSY L+ +S E ++++ P+G L K ++R + Sbjct: 125 ESIATGHYAHIREDNGRFVLSKGVDTLKDQSYVLWGVSQESLSRTKLPLGHLRKSEIRDM 184 Query: 182 AEDLGLV-TAKKKDSTGICFIGERKFREFLGRYLPAQPGK------IITVDGDEIGEHQG 234 A + G + K +S ICF+ + +R FL R +P + ++ G +G+HQG Sbjct: 185 ATERGFMELVTKSESYEICFVPDNDYRGFLKRRMPGLEAEVAGGNFVMEGTGKVLGKHQG 244 Query: 235 LMYHTLGQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLHW 294 ++T+GQRKGLG+ +P +V + + N +V+ + L G+I +L+ Sbjct: 245 YPFYTIGQRKGLGM-----AFGQPMFVTEIRKDTNEVVLGVDKD---LYRDGMIVSKLNL 296 Query: 295 VDREPFTGTMRCTVKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTPGQSAVFYNGEVC 354 G M K RY+ T+ + D+IEV+F E V+A+ PGQ+AVFY G+ Sbjct: 297 QKYPTLNGPMETVTKVRYKDPGTAATI-SQSGDKIEVLFKEGVSAIAPGQAAVFYEGDDV 355 Query: 355 LGGGII 360 +GGG I Sbjct: 356 IGGGWI 361 >UniRef50_Q2LVR6 tRNA-specific 2-thiouridylase mnmA 2 n=1 Tax=Syntrophus aciditrophicus SB RepID=MNMA2_SYNAS Length = 342 Score = 218 bits (556), Expect = 2e-55, Method: Compositional matrix adjust. Identities = 129/335 (38%), Positives = 187/335 (55%), Gaps = 33/335 (9%) Query: 56 ADAQAVCDKLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFA 115 A A+ +LGI LH + + + + + EY RTPNP ++CN++IKFK L + Sbjct: 16 ARARHAAHQLGIPLHVADVTETFDEEIVQYLTREYLVARTPNPCVVCNRKIKFKTLL-YY 74 Query: 116 AEDLGADYIATGHYVR--RADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGEL 173 A+ L ++ATGHY R G+ LLRGLD KDQSYFL+ L EQ+++ LFP+GEL Sbjct: 75 ADRLACHFVATGHYARVFHNRQTGRYALLRGLDQAKDQSYFLFLLGQEQLSRILFPLGEL 134 Query: 174 EKPQVRKIAEDLGLVTAKKKDSTGICFIGERKFREFLGRYL---PAQPGKIITVDGDEIG 230 K +VR +A +G+ ++K+S ICFI + ++ F+ R++ PA PG I+ G +G Sbjct: 135 TKKEVRSVALTMGVEAVREKESQEICFIPDDDYKTFIERHMGSSPAIPGDIVDRSGRLLG 194 Query: 231 EHQGLMYHTLGQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQ 290 H G+ T+GQRKGL I + P+YV+ D E N +VV GHE + S GLI Sbjct: 195 SHNGIHSFTIGQRKGLHIAAPR-----PYYVLAIDREKNRVVV--GHEEEQGFS-GLIVS 246 Query: 291 QLHWVDRE-PFTGTMRCTVKTRYRQ---TDIPCTVKALDD---------------DRIEV 331 + W+D E P V+ RYR + + C + A D+ D++ + Sbjct: 247 GVSWIDGESPREEVFETLVRIRYRHRGVSSVVCPLSAGDEICPATGRPADHEEAGDKLII 306 Query: 332 IFDEPVAAVTPGQSAVFYNGEVCLGGGIIEQRLPL 366 F EP AV PGQ+AVFY+ + +GGG IEQ +PL Sbjct: 307 RFQEPQRAVAPGQAAVFYSDDRVIGGGWIEQGIPL 341 >UniRef50_C4QP81 tRNA(5-methylaminomethyl-2-thiouridylate)-methy lt ransferase,putative (Fragment) n=1 Tax=Schistosoma mansoni RepID=C4QP81_SCHMA Length = 312 Score = 218 bits (556), Expect = 2e-55, Method: Compositional matrix adjust. Identities = 121/297 (40%), Positives = 180/297 (60%), Gaps = 32/297 (10%) Query: 3 ETAKKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYCTAAADLADAQAVC 62 ++ V +SGGVDS+VSA+LL+++G+QV+G+FM NW+ D + C+ D DAQ VC Sbjct: 22 KSIHSVACAISGGVDSAVSAYLLKKKGFQVKGVFMTNWDSLDEKIDCSLDKDRQDAQFVC 81 Query: 63 DKLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKF----KAFLEF---- 114 D LGI NF EYW+ VF + Y+ G TPNPDILCN+ +KF +A L+ Sbjct: 82 DYLGIPFFEKNFVKEYWNYVFLPLIKSYEQGATPNPDILCNRFVKFNLLTRAVLKSKNQC 141 Query: 115 ------AAEDLGADYIATGHYVR---------RADVDGKSRLLRGLDSNKDQSYFLYTLS 159 A+ +L AD IATGHY + R D + ++RLLR +D KDQ+++L T+S Sbjct: 142 ADDDSQASSNLAADAIATGHYCQNSFGNYLQYRKD-NVEARLLRSVDRVKDQTFWLSTIS 200 Query: 160 HEQIAQSLFPVGELEKPQVRKIAEDLGLV-TAKKKDSTGICFIGERKFREFLGRYLPAQP 218 H+++ +FPVG+L K QV++IA+D+GL +++S G+CFIG+R+F EF+ YL +P Sbjct: 201 HKELPYCMFPVGDLLKTQVKQIAQDIGLSRIYSRRESMGMCFIGKRRFSEFIDNYLEPKP 260 Query: 219 GKIITVDGDEI-GEHQGLMYHTLGQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVA 274 G ++ D++ EH G+ + TLGQR + + P+YV D N I+ V Sbjct: 261 GVYKDLETDQVLEEHTGVHHFTLGQRIPI------KRFNGPYYVSKMDCHNQIIYVV 311 >UniRef50_A6Q239 tRNA-specific 2-thiouridylase mnmA n=2 Tax=Epsilonproteobacteria RepID=MNMA_NITSB Length = 339 Score = 218 bits (555), Expect = 3e-55, Method: Compositional matrix adjust. Identities = 138/360 (38%), Positives = 208/360 (57%), Gaps = 27/360 (7%) Query: 5 AKKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYCTAAADLADAQAVCDK 64 +KK++V MSGGVDSS +A LLQ +GY+V G++MK EEY ++A+ Q V Sbjct: 2 SKKIVVAMSGGVDSSYTANLLQSRGYEVIGVYMKFHPR---EEY--HQKNIANIQKVAKH 56 Query: 65 LGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGADYI 124 LGIE H ++ E+ + V++ F+ Y AG TPNP +CN+ +KF +EFA E LG D + Sbjct: 57 LGIEYHVLDRTKEFQERVYQPFVDSYVAGLTPNPCAMCNRVMKFTELIEFADE-LGVDNV 115 Query: 125 ATGHYVRRADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQVRKIAED 184 ATGHY A DG+ + D +KDQSYFL+ L E + + +FP+G+ K V+K A Sbjct: 116 ATGHY---AKTDGQF-IYEATDKSKDQSYFLFNLKKEFLPRIIFPLGDWYKENVKKEAMK 171 Query: 185 LGLV--TAKKKDSTGICFIGERKFREFLGRYLPAQ-PGKIITVDGDEIGEHQGLMYHTLG 241 + L+ A++K+S+ ICF+ E + + L + + PG+++ G IGEH+G M++T+G Sbjct: 172 ILLLKSIAEQKESSEICFV-ETNYIDVLKEHTEVEMPGEVVDTHGKVIGEHKGYMHYTIG 230 Query: 242 QRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLH-WVDREPF 300 +RKG + +P YV+D N +VV + L ++ + L+ ++D++ F Sbjct: 231 KRKGFRLF----KAHQPHYVLDIIPHKNRIVVGTKEQ---LEKRQIVLRGLNMFLDQKEF 283 Query: 301 TGTMRCTVKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTPGQSAVFYNGEVCLGGGII 360 C +K RYR +PC VK +D V EPV V GQ+ VFY+ E LGGG I Sbjct: 284 D----CYIKIRYRTHKVPCHVK-IDGSVASVTLKEPVYGVAKGQAGVFYDEEKVLGGGWI 338 >UniRef50_D1N0N9 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase n=1 Tax=Victivallis vadensis ATCC BAA-548 RepID=D1N0N9_9BACT Length = 358 Score = 217 bits (553), Expect = 5e-55, Method: Compositional matrix adjust. Identities = 142/363 (39%), Positives = 194/363 (53%), Gaps = 19/363 (5%) Query: 6 KKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEED---DGEEYCTAAADLADAQAVC 62 +KVIV +SGGVDSSV+A L QQ G +V G+ ++ D + C + D A +++C Sbjct: 3 EKVIVALSGGVDSSVAAVLAQQAGCEVIGVTLRLKHPDPEFSAAQLCASKNDEAAVESIC 62 Query: 63 DKLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGAD 122 KLGIE H + E+ V EY GRTPNP CN IKF +EFA +GA Sbjct: 63 AKLGIEHHYLELFPEFECKVLRPAAQEYARGRTPNPCCECNYRIKFGKLVEFA-RSVGAA 121 Query: 123 YIATGHYVRRADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQVRKIA 182 + TGHY + ++ G L RG D KDQSYFLY L ++ FPVG ++K +VR+IA Sbjct: 122 KVLTGHYAKLSEHGGVYELRRGDDLKKDQSYFLYRLDQAILSMVRFPVGAMDKGEVRRIA 181 Query: 183 EDLGLVTAKKKDSTGICF-IGERKFREFLGRY--LPAQPGKIITVDGDEIGEHQGLMYHT 239 + GLVT+ K DS CF + F E L R LP +PG + G +G H G+ T Sbjct: 182 AEYGLVTSDKPDSQDACFQVPGESFGETLRRLEKLPRRPG-LFRYQGRIVGRHNGVHEFT 240 Query: 240 LGQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLHWVD-RE 298 +GQRKGL + P YV D E+ + + E RL++ +++ W R Sbjct: 241 IGQRKGLNV-----ALGVPAYVAGIDPESGDIRLET--EPERLLASRFTVERVSWQSGRA 293 Query: 299 P-FTGTMRCTVKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTPGQSAVFYNGEVCLGG 357 P +G + V+ RYR +PC V+ V P AVTPGQ+AVFY G++ LGG Sbjct: 294 PDLSGEL--EVQIRYRSRAVPCRVEPDGAGGAAVFPAIPQRAVTPGQAAVFYRGDLLLGG 351 Query: 358 GII 360 G+I Sbjct: 352 GVI 354 >UniRef50_C1ZEX9 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase n=3 Tax=Planctomycetaceae RepID=C1ZEX9_PLALI Length = 388 Score = 217 bits (552), Expect = 6e-55, Method: Compositional matrix adjust. Identities = 144/384 (37%), Positives = 204/384 (53%), Gaps = 33/384 (8%) Query: 4 TAKKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKN------------------WEEDDG 45 + ++V++ MSGGVDSSV+A LLQQQGY+V GLFM++ E Sbjct: 2 SKERVVLAMSGGVDSSVAAVLLQQQGYEVIGLFMRSGEASASACSLPPSGLLPVIERKSH 61 Query: 46 EEYCTAAADLADAQAVCDKLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKE 105 ++ C +AAD ADAQ V D L I H +NF + +D + F EY GRTPNP ++CN Sbjct: 62 KQGCCSAADAADAQRVADLLDIPFHALNFR-DSFDQIKSYFADEYLKGRTPNPCVMCNVW 120 Query: 106 IKFKAFLEFAAEDLGADYIATGHYVRR-ADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIA 164 +KF EFA + +GA IATGHY R D G++RL+RG D +KDQSY L+ + + ++ Sbjct: 121 LKFGRLWEFA-QQVGATRIATGHYARIIQDEFGQTRLMRGADLSKDQSYVLFGIRPDILS 179 Query: 165 QSLFPVGELEKPQVRKIAEDLGLVTAKKKDSTGICFIGERKFREFLGRY--LPAQPGKII 222 + LFPVG K ++R+IA L A K DS ICFI + +R FL RY + G + Sbjct: 180 KILFPVGHQPKAEIREIAAQANLRVAGKPDSQEICFIPDNDYRGFLRRYRDVSDTSGNFV 239 Query: 223 TVDGDEIGEHQGLMYHTLGQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRL 282 G +G+H G T+GQR+GLGI EP +V+ D E+ + + E L Sbjct: 240 DPQGKILGQHSGFEQFTIGQRRGLGI-----ALGEPRFVIKIDAESRNVTLGTAEE---L 291 Query: 283 MSVGLIAQQLHWVDREPFTGTMRCTVKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTP 342 S L+A + +W+ P + CT + R + D + + F EP + V P Sbjct: 292 GSSSLVAARTNWLS-APTSEVFSCTAQIRSMHRAAAAWAQVDADGTLHLRFCEPQSGVAP 350 Query: 343 GQSAVFYNG-EVCLGGGIIEQRLP 365 GQ+ V Y+ E + G IE P Sbjct: 351 GQAVVLYDSLERVICGAWIEDSQP 374 >UniRef50_B9L801 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase n=1 Tax=Nautilia profundicola AmH RepID=B9L801_NAUPA Length = 341 Score = 217 bits (552), Expect = 7e-55, Method: Compositional matrix adjust. Identities = 135/357 (37%), Positives = 199/357 (55%), Gaps = 22/357 (6%) Query: 5 AKKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYCTAAADLADAQAVCDK 64 AK+V+VG+SGGVDS++S +LL++QGY V G++MK E + E ++A + K Sbjct: 2 AKRVLVGVSGGVDSAMSVYLLKEQGYDVVGIYMKMHEGVNHVE------NVAKLNRLSKK 55 Query: 65 LGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGADYI 124 LG E + E+ V+E F+ YK G TPNP +CN +IKF F+ F E G + Sbjct: 56 LGFEYVIEDVEDEFRKEVYEYFVESYKQGITPNPCAMCNIKIKFGIFMGFL-EKYGCELA 114 Query: 125 ATGHYVRRADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQVRKIAED 184 ATGHYVR DG+ L + D +KDQSYFL+ + + + + LFP+GE K +++K+A + Sbjct: 115 ATGHYVRN---DGEF-LYQAKDQSKDQSYFLFGIKKKVLPKILFPLGEYTKDEIKKLASE 170 Query: 185 LGL-VTAKKKDSTGICFIGERKFREFLGRYLPAQPGKIITVDGDEIGEHQGLMYHTLGQR 243 +GL A +K+S ICFI + P + GK++ G +IG H+G ++T+GQR Sbjct: 171 IGLDEFASQKESQDICFIDNSYIDVLKLHFNPERKGKVVNKRGQKIGVHKGYSFYTVGQR 230 Query: 244 KGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLHWVDREPFTGT 303 KG + + +P YV+ D ++N L+V + + V L L ++D + F Sbjct: 231 KGFNLFKS----HKPQYVIGIDAKSNTLIVGDKKDLEK-KQVFLKGVNL-FIDDKVF--- 281 Query: 304 MRCTVKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTPGQSAVFYNGEVCLGGGII 360 C K RYR +P VK + V F EPV+ V GQ+ VFY GE LGGG I Sbjct: 282 -ECEAKIRYRAPKVPAVVKMESKSKAVVNFHEPVSGVAKGQACVFYEGEKLLGGGWI 337 >UniRef50_B2IBH3 tRNA-specific 2-thiouridylase mnmA n=141 Tax=root RepID=MNMA_BEII9 Length = 431 Score = 216 bits (551), Expect = 8e-55, Method: Compositional matrix adjust. Identities = 142/373 (38%), Positives = 208/373 (55%), Gaps = 27/373 (7%) Query: 7 KVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEY-----CTAAADLADAQAV 61 +V+V MSGGVDSSV A LL+++GY+V G+ ++ + D GE C A D+ DA+ V Sbjct: 31 RVVVAMSGGVDSSVVAALLKREGYEVIGVTLQLY--DHGEAVHRKGACCAGQDIQDARQV 88 Query: 62 CDKLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGA 121 D+LGI + +++ + V + F Y G TP P + CN EIKF E A+ LGA Sbjct: 89 ADQLGIPHYVLDYEERFRRKVIDPFAQSYATGETPIPCVSCNSEIKFADLFE-TAQHLGA 147 Query: 122 DYIATGHYVR-RADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQVRK 180 D +ATGHYV +A+ DG L R LDS++DQSYFL+ ++ Q+ FP+G+L KP VR+ Sbjct: 148 DVLATGHYVSSKAEADGGRALYRSLDSSRDQSYFLFATTNAQLELLRFPLGDLAKPDVRQ 207 Query: 181 IAEDLGLVTAKKKDSTGICFIGERKFREFLGRYLPAQ--PGKIITVDGDEIGEHQGLMYH 238 +A LGLV A K DS ICF+ K+ + + R P PG+I+ VDG +G H G++++ Sbjct: 208 MARQLGLVVADKADSQDICFVPSGKYSDVIERLSPGAVVPGEILHVDGRVLGRHSGVIHY 267 Query: 239 TLGQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPR--LMSVGLIAQQLHWVD 296 T+GQR+GLG+G G EP YV+ D ++V PR L + + + ++W+ Sbjct: 268 TIGQRRGLGLGAVGAGAGEPLYVIRLDAAKAQVIVG-----PRQALATRRVHLRGVNWIG 322 Query: 297 REPFTGT----MRCTVKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTPGQSAVFYNGE 352 + V+ R + IP + A + + I V F V+PGQ+ VFY + Sbjct: 323 PGSLQDMDEHGLEIFVQVRSTRAPIPGFLHAHESE-IWVDFALDEDGVSPGQACVFYEND 381 Query: 353 ----VCLGGGIIE 361 LGGG I Sbjct: 382 QPRARVLGGGFIS 394 >UniRef50_Q6MLR7 tRNA-specific 2-thiouridylase mnmA n=1 Tax=Bdellovibrio bacteriovorus RepID=MNMA_BDEBA Length = 360 Score = 216 bits (550), Expect = 1e-54, Method: Compositional matrix adjust. Identities = 139/369 (37%), Positives = 205/369 (55%), Gaps = 30/369 (8%) Query: 7 KVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEE-----DDGEEYCTAAADLADAQAV 61 +V+V MSGGVDSS +A LL +QGY+V G M+ W+ ++G C ++ D+ DA+AV Sbjct: 5 RVLVAMSGGVDSSAAAALLVEQGYEVIGATMQVWDYSTCDIEEGNGTCCSSIDVDDARAV 64 Query: 62 CDKLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGA 121 D+LGI + +N A++ V + FL Y G+TP P + CN +KF ++ E L Sbjct: 65 ADRLGIPFYVINCEAKFRAAVIDPFLKAYLEGQTPLPCVNCNTYLKFDHLVKKMRE-LEC 123 Query: 122 DYIATGHYVRRA-DVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQVRK 180 DYIATGHY + D GK+ + D KDQ+YFL+T+ E + + LFPVG+++KPQVR+ Sbjct: 124 DYIATGHYAKIVYDDKGKASIHTSTDDWKDQTYFLFTIDPELVPKLLFPVGDMKKPQVRE 183 Query: 181 IAEDLGLVTAKKKDSTGICFIGERKFREFLGRY-----LPAQPGKIITV-DGDEIGEHQG 234 +E GLVTA+KKDS GICF+G + ++ F+ + L ++ G I +G + H+G Sbjct: 184 YSESRGLVTARKKDSQGICFVGNQGYQNFIKDHVKSEILASKKGLIKRFPEGQVMASHEG 243 Query: 235 LMYHTLGQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLHW 294 + +T GQ KGLG+ E +V+ D +N + V + +H L A ++ Sbjct: 244 IHNYTYGQSKGLGM-----DYHEKLFVIKIDASDNTVWVGE-EKH-------LFANEVDV 290 Query: 295 VDREPFTGTMR---CTVKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTPGQSAVFYNG 351 VD + VK RY+ P V ++ F EP AVTPGQ+AVFY Sbjct: 291 VDPKLLDEIQDGEIMNVKIRYQHKGAPAQVIKTASG-FKLKFTEPQRAVTPGQAAVFYRD 349 Query: 352 EVCLGGGII 360 +GGG I Sbjct: 350 RQLVGGGWI 358 >UniRef50_B3JKC8 Putative uncharacterized protein n=2 Tax=Bacteroides RepID=B3JKC8_9BACE Length = 353 Score = 215 bits (547), Expect = 2e-54, Method: Compositional matrix adjust. Identities = 133/367 (36%), Positives = 204/367 (55%), Gaps = 26/367 (7%) Query: 6 KKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYCTAAADLADAQAVCDKL 65 KV++GMSGG DSSV+A LLQ GY+V G+ + +E+D+ EY L DA+ +C++L Sbjct: 5 NKVLLGMSGGTDSSVAALLLQDAGYEVTGVTFRFYEKDNNTEY------LDDARELCERL 58 Query: 66 GIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGADYIA 125 I T + E+ + + F+ EY GRTP P LCN +K+ L+ A++ G + A Sbjct: 59 HISHITYDARNEFRERIISYFINEYMTGRTPVPCTLCNNYLKW-PLLKKLADEKGIYHFA 117 Query: 126 TGHYVRRADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQVRKIAEDL 185 TGHYV++ ++DG + G D +KDQS+FL+ L + + + L P+G+L K +VR+IA + Sbjct: 118 TGHYVQKRNIDGYWHITTGTDVDKDQSFFLWGLPQDILQRMLLPMGKLTKNKVREIAAER 177 Query: 186 G-LVTAKKKDSTGICFIGERKFREFLGRYLPAQ---PGKIITVDGDEIGEHQGLMYHTLG 241 G L A K+DS G+CF +R FL ++ + PG G+ +G+H+G ++T+G Sbjct: 178 GFLKAAHKRDSLGVCFC-PMDYRSFLKEHVKKELIMPGNFYDESGNCLGKHEGYPFYTIG 236 Query: 242 QRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQL-HWVDREP- 299 QR+GLGI K +V + N ++++ +L S+G L W P Sbjct: 237 QRRGLGIYLNK-----ALFVKQIIPQTNSIILSD-----QLCSLGQTEMYLTDWHVTNPS 286 Query: 300 --FTGTMRCTVKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTPGQSAVFYNGEVCLGG 357 F T VK RYR+ CTV D ++ + EP+ ++ GQ+A FY +V LGG Sbjct: 287 ALFETTDEIIVKIRYRKQANRCTVIPTPDGQLHIKLHEPLTSIAAGQAAAFYRDDVVLGG 346 Query: 358 GIIEQRL 364 GII L Sbjct: 347 GIICSSL 353 >UniRef50_C5CIB3 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase n=1 Tax=Kosmotoga olearia TBF 19.5.1 RepID=C5CIB3_KOSOT Length = 359 Score = 214 bits (546), Expect = 3e-54, Method: Compositional matrix adjust. Identities = 128/364 (35%), Positives = 200/364 (54%), Gaps = 19/364 (5%) Query: 7 KVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEED------DGEEYCTAAADLADAQA 60 K+ V +SGGVDS+V+A +L+ +G+ V G MKN + + ++ C + +D D Sbjct: 4 KIGVALSGGVDSAVAAAILKAEGHDVVGYHMKNLPDTLFELVPEKKKVCCSPSDTIDTHK 63 Query: 61 VCDKLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLG 120 + KLGIEL V + + + F+ EY+AG+TPNP + CN +KF A +E A D G Sbjct: 64 IAAKLGIELRIVKLNDIFRKEIIDYFIREYQAGKTPNPCVRCNDLMKFGALMEKAFGD-G 122 Query: 121 ADYIATGHYVRRADVDGKS-RLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQVR 179 + A+GHY R + L RG+ KDQ+YFL + ++ +FP G + K ++R Sbjct: 123 MEKFASGHYARIVEHPKYGLSLARGVAKYKDQAYFLSRIKRRKLPYIIFPNGNMTKEEIR 182 Query: 180 KIAEDLGLVTAKKKDSTGICFIGERKFREFLGRY-LPAQPGKIITVDGDEIGEHQGLMYH 238 IA +LGL KK+S +CFI + +R FL + +PG+I+ ++G+ +G H+GL ++ Sbjct: 183 DIARELGLPVHSKKESQELCFIPDNDYRRFLLEEGIEIKPGEIVDLEGNVLGRHKGLAFY 242 Query: 239 TLGQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLHWVDRE 298 T+GQR+GLGI K+ YVV D + N +VV +M A + +W+ + Sbjct: 243 TVGQRRGLGIVSDKK-----LYVVALDADKNRVVVGPKEA---VMRKKFRAIEPNWL-AD 293 Query: 299 PFTGTMRCTVKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTPGQSAVFYNGEVCLGGG 358 +RC + R T++ + +EV FD+P A+TPGQ AVFY+G + LG Sbjct: 294 LDEKELRCQCQIRSNMKAQGATIRIFSNI-VEVEFDKPALAITPGQLAVFYDGNIVLGSA 352 Query: 359 IIEQ 362 IE Sbjct: 353 FIEN 356 >UniRef50_C9M7Q8 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase n=1 Tax=Jonquetella anthropi E3_33 E1 RepID=C9M7Q8_9BACT Length = 344 Score = 214 bits (544), Expect = 5e-54, Method: Compositional matrix adjust. Identities = 140/369 (37%), Positives = 199/369 (53%), Gaps = 35/369 (9%) Query: 1 MSETAKKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYCTAAADLADAQA 60 MSE+ V+VG+SGGVDS S L+ GYQV +F+K ++ AD D Q Sbjct: 1 MSES---VLVGVSGGVDSICSCLKLRDLGYQVAPVFLKMKDQ----------ADERDVQR 47 Query: 61 VC---DKLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFA-A 116 + + G+ + TV+ + V E FL E AGRTPNP ++CN+ +K + E A Sbjct: 48 IARFEEVTGLTVETVDCRELFRQRVIEPFLQELTAGRTPNPCVICNQFLKVRLLFEEADR 107 Query: 117 EDLGADYIATGHYVRRADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKP 176 +GA +ATGHY + DG RL RG S KDQSY LY L + + +FP+ EK Sbjct: 108 RQIGA--VATGHYAKILQKDGLCRLARGA-SAKDQSYMLYRLPQAYLERLVFPLENSEKG 164 Query: 177 QVRKIAEDLGLVTAKKKDSTGICFIGERKFREFLGRYLPA---QPGKIITVDGDEIGEHQ 233 QVR++A + + DS ICF+G FL ++ QPG++++ G +G H+ Sbjct: 165 QVRRLAREALGGSFGDGDSQDICFLGSLGLNAFLASHVTGAAIQPGQMVSDSGQVLGRHR 224 Query: 234 GLMYHTLGQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLH 293 GL ++T+GQRKGLG+GG PWYV +K ++ L+++ R + L H Sbjct: 225 GLAHYTVGQRKGLGLGGG------PWYVTEKRLDERQLILSHVERPER--RIILKDPVWH 276 Query: 294 WVDREPFTGTMRCTVKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTPGQSAVFYNGEV 353 + E T V+TRYR PCT++ D+ R V+ D P A PGQSAV Y+GE+ Sbjct: 277 VLPDE----TKSYLVQTRYRSHPKPCTLRRTDEGRWAVLLDAPSGASAPGQSAVVYDGEL 332 Query: 354 CLGGGIIEQ 362 +GGGII Q Sbjct: 333 VVGGGIIHQ 341 >UniRef50_A9BIS3 tRNA-specific 2-thiouridylase mnmA n=1 Tax=Petrotoga mobilis SJ95 RepID=MNMA_PETMO Length = 367 Score = 213 bits (541), Expect = 1e-53, Method: Compositional matrix adjust. Identities = 130/369 (35%), Positives = 203/369 (55%), Gaps = 23/369 (6%) Query: 4 TAKKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEE------DDGEEYCTAAADLAD 57 + KKV++ MSGGVDSSV+A+LL++Q Y V GL K + + ++ C + +D D Sbjct: 2 SNKKVLMLMSGGVDSSVAAYLLKEQNYHVIGLHFKTVSDVVFSLIPEKKKVCCSPSDTQD 61 Query: 58 AQAVCDKLGIE-LHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAA 116 A + DKL ++ V+ E+ + + + F+ YK G+TPNP +LCN+ KF LE A Sbjct: 62 ALKIADKLDLDDFQIVDIKKEFKEKIIDYFIKTYKEGKTPNPCMLCNRFFKFGKALEIA- 120 Query: 117 EDLGADYIATGHYVRRADVDGKSRLL--RGLDSNKDQSYFLYTLSHEQIAQSLFPVGELE 174 GAD++++GHY+ + + S + +G+D KDQSYFL + + + FP+G + Sbjct: 121 HSYGADWVSSGHYLIKEYSNKYSTYIIKKGVDQYKDQSYFLSYIDKNTLPKLHFPLGNMY 180 Query: 175 KPQVRKIAEDLGLVTAKKKDSTGICFIGERKFREFLGRY-LPAQPGKIITVDGDEIGEHQ 233 K ++R IA +GL A K DS +CFI + +R FL + + GK+ ++G+EIG H Sbjct: 181 KVEIRDIANKIGLSVANKPDSQELCFIPDNDYRRFLKENGVTTEEGKVYDLEGNEIGTHT 240 Query: 234 GLMYHTLGQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLH 293 G M +T+GQR G+ + +V + N+L+VA E + S LI Q ++ Sbjct: 241 GYMNYTIGQRSGISY---YKNANVKLHVYKIFPQKNVLIVAPTEE---MYSKELIVQNVN 294 Query: 294 -WVDREPFTGTMRCTVKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTPGQSAVFYNGE 352 +VD + G R R + + P VK + D ++V F EP+ AVTPGQ A Y+ Sbjct: 295 FFVDFKEIEGFCR----VRKKSEEKPAVVKKIADHTLKVSFKEPIFAVTPGQFATIYDES 350 Query: 353 -VCLGGGII 360 V L G+I Sbjct: 351 GVVLASGVI 359 >UniRef50_A7HCV7 tRNA-specific 2-thiouridylase mnmA n=1 Tax=Anaeromyxobacter sp. Fw109-5 RepID=MNMA_ANADF Length = 349 Score = 211 bits (538), Expect = 3e-53, Method: Compositional matrix adjust. Identities = 134/358 (37%), Positives = 187/358 (52%), Gaps = 15/358 (4%) Query: 7 KVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEE--YCTAAADLADAQAVCDK 64 +V+V +SGGVDSS +A LL +G+ V G+ M+ + D C A DL DA+A + Sbjct: 2 RVLVALSGGVDSSTAAALLVAEGHDVIGVSMRVADYSDARRGRSCCAPDDLEDARAAARR 61 Query: 65 LGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGADYI 124 L I + N A + + V E F+ +Y GRTPNP + CN ++KF +L A LGA + Sbjct: 62 LDIPFYVANVEARFRERVIEPFVRDYVEGRTPNPCVACNSDVKFD-WLLARARALGAK-L 119 Query: 125 ATGHYVRRADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQVRKIAED 184 ATGHY R G+ L R D KDQ+YFLY L E + LFPVG+L K VR +A Sbjct: 120 ATGHYARVERRGGRFALCRAGDPAKDQTYFLYGLGQEALRDVLFPVGDLAKRDVRAVAAQ 179 Query: 185 LGLVTAKKKDSTGICFIGERKFREFLGRYLPA--QPGKIITVDGDEIGEHQGLMYHTLGQ 242 GL A+K +S ICF+ + +F+ P + G+I++ G+ +G H G+ T+GQ Sbjct: 180 AGLPNAEKAESQEICFVTQGDAGDFVALRAPGSVRAGEIVSTAGEVLGRHDGVHRFTVGQ 239 Query: 243 RKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLHWVDREPFTG 302 R+GLG+ G P YVV + +VV E R ++ W+ P Sbjct: 240 RRGLGLAGPA-----PRYVVRLEPGTARVVVGSAGEASRDR---FAVTEVRWIAGAPPPR 291 Query: 303 TMRCTVKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTPGQSAVFYNGEVCLGGGII 360 + VK R+R TV D +V PV V PGQ+AVFY+G+ LGGG I Sbjct: 292 PVAARVKVRHRHEGEEGTVTP-DGGGGQVRLARPVRGVAPGQAAVFYDGDEVLGGGRI 348 >UniRef50_C7NES3 tRNA(5-methylaminomethyl-2-thiouridylate)-methyl transferase n=5 Tax=Fusobacteriaceae RepID=C7NES3_LEPBD Length = 364 Score = 211 bits (538), Expect = 3e-53, Method: Compositional matrix adjust. Identities = 133/369 (36%), Positives = 208/369 (56%), Gaps = 23/369 (6%) Query: 6 KKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGE---EYCTAAADLADAQAVC 62 KKV+VGMSGG+DSSV+A LL+QQGY+V G+ +K+ ++ E + C + D+ DA+ C Sbjct: 8 KKVVVGMSGGIDSSVAALLLKQQGYEVIGVTLKHLPDELSENPGKTCCSLDDINDARYTC 67 Query: 63 DKLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGAD 122 LGI + +N E+ +V E F+ Y AG+TP+P ++C++++K K +EF A+ +G Sbjct: 68 YNLGIPHYVLNVVEEFKKDVMEYFIKMYNAGKTPSPCVICDEKVKIKKLVEF-ADKMGIK 126 Query: 123 YIATGHYVRRADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQVRKIA 182 YI+TGHY + V + LL ++ KDQ+Y LY L + + + LFP+ E EK +VR+IA Sbjct: 127 YISTGHY---SKVSENNMLLWDKNNRKDQTYMLYRLDKDIVERFLFPLAEYEKSEVREIA 183 Query: 183 EDLGLVTAKKKDSTGICFIGERKFREFLGRYL--PAQPGKIITVDGDEIGEHQGLMYHTL 240 G+ T K DS GICF + FL + L + G + +G IGEH G ++T+ Sbjct: 184 RQNGIHTHNKPDSQGICF-APNGYIPFLKKVLGNDVKKGNFVDKNGKIIGEHIGYQFYTI 242 Query: 241 GQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLHWVDREPF 300 GQR+GLG+ K P++V++ E N +VV E + + +I + H+ E Sbjct: 243 GQRRGLGLNLGK-----PFFVLELRPETNEVVVGD-FEELLIKEIEVINYKFHY-SLENI 295 Query: 301 TGTMRCTVKTRYRQTDIPCTVKAL-----DDDRIEVIFDEPVAAVTPGQSAVFYNGEVCL 355 G + T + R+ + +K L +++RI FDE + GQ VFY + + Sbjct: 296 IGK-KLTARPRFSSKGLTGELKILKNEESNENRIIFEFDEKTHENSEGQHIVFYLNDEIV 354 Query: 356 GGGIIEQRL 364 GGG I+ L Sbjct: 355 GGGEIKLLL 363 >UniRef50_A9A0S9 tRNA-specific 2-thiouridylase mnmA n=1 Tax=Desulfococcus oleovorans Hxd3 RepID=MNMA_DESOH Length = 358 Score = 211 bits (537), Expect = 3e-53, Method: Compositional matrix adjust. Identities = 135/357 (37%), Positives = 193/357 (54%), Gaps = 22/357 (6%) Query: 8 VIVGMSGGVDSSVSAWLLQQQGYQVEGL-FMKNWEEDDGEEYCTAAADLADAQAVCDKLG 66 + V +SGG+DS V+A LL+Q G V + F+ +E +D A L + + ++ Sbjct: 19 IAVLVSGGIDSLVAAHLLKQSGADVTAIHFLTGYEPED------RAGRL---EKLFTQMD 69 Query: 67 IELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGADYIAT 126 I + + + NV + F A Y G TPNP ++CN IKF A +++A LGAD +AT Sbjct: 70 IPVFIFDCRTVFQSNVVDYFTAAYLRGETPNPCMVCNSRIKFGACMDYA-RSLGADAVAT 128 Query: 127 GHYVRRADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQVRKIAEDLG 186 GHY R RL +G D K+QSYFL LS +Q+ ++ FP+ + K QVR A G Sbjct: 129 GHYCRTTKDPDGVRLWKGADPAKEQSYFLAFLSQDQLGRARFPLERMTKDQVRAHAARHG 188 Query: 187 LVTAKKKDSTGICFIGERKFREFLGRYLPA--QPGKIITVDGDEIGEHQGLMYHTLGQRK 244 LV + K+S +CFI + +F+ +PA PG I + G IG H GL T+GQR+ Sbjct: 189 LVPIESKESQDVCFIRGEECADFIEAQVPAIPGPGPIEDMTGRLIGTHSGLHRFTVGQRR 248 Query: 245 GLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLHWVDREPFTGTM 304 G+ E+P+YV D+ N L V G + V +A Q++W+ P G+M Sbjct: 249 GINCPA-----EQPYYVAALDMARNCLKV--GFRQDLFVPVCRVA-QVNWIPDRP-KGSM 299 Query: 305 RCTVKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTPGQSAVFYNGEVCLGGGIIE 361 +VK RY QT++P + AL + V F P AV PGQ AVFY+G+ LGGGII Sbjct: 300 NVSVKIRYNQTEVPARLTALGETDAVVEFVTPQFAVAPGQGAVFYDGDAVLGGGIIR 356 >UniRef50_Q0ARV1 tRNA-specific 2-thiouridylase mnmA n=67 Tax=Alphaproteobacteria RepID=MNMA_MARMM Length = 405 Score = 211 bits (537), Expect = 4e-53, Method: Compositional matrix adjust. Identities = 132/365 (36%), Positives = 201/365 (55%), Gaps = 24/365 (6%) Query: 7 KVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDG---EEYCTAAADLADAQAVCD 63 +V+V MSGGVDSSV+A LL GY V G+ ++ ++ + C A D+ DA+ V + Sbjct: 37 RVVVAMSGGVDSSVTAALLHHLGYDVVGVTLQLYDHGAAMAKKGACCAGQDIYDAKRVAE 96 Query: 64 KLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGADY 123 G + +++ + + + V E F Y AG TP P + CN+ +KF L A LGA Sbjct: 97 ACGFRHYVLDYESRFREAVIEEFADTYLAGFTPIPCVRCNQTVKFADLLT-TARQLGAVC 155 Query: 124 IATGHYVRRADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQVRKIAE 183 +ATGHY++R D + L R D+ KDQSYFL+ +H+Q+ FP+G L K Q R++AE Sbjct: 156 MATGHYIQRVDGPNGAELRRAADAGKDQSYFLFATTHDQLDFLRFPLGHLNKDQTRELAE 215 Query: 184 DLGLVTAKKKDSTGICFIGERKFREFLGRYLP--AQPGKIITVDGDEIGEHQGLMYHTLG 241 GL+ A K DS ICF+ ++ + + + P ++PG+I+ VDG +G H+G++ +T+G Sbjct: 216 AFGLIVADKPDSQDICFVPNGRYVDIVEKVRPGASRPGEIVHVDGRVLGTHEGVIRYTVG 275 Query: 242 QRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPR-LMSVGLIA-QQLHWV-DRE 298 QR+GL I +P YVV D +VV PR + + IA + ++W+ D Sbjct: 276 QRRGLKI-----AVGDPLYVVRLDAAKAEVVVG-----PREALEIDTIALKDINWLGDEA 325 Query: 299 PFTGTMRCTVKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTPGQSAVFYNG---EVCL 355 P G VK R + +P + ++D D I V+ V PGQ+ VFY+ + L Sbjct: 326 PLDGAP-VRVKVRSTRPPVPAAL-SVDGDDIRVVLARGEEGVAPGQACVFYSSDDEDRVL 383 Query: 356 GGGII 360 GGG I Sbjct: 384 GGGWI 388 >UniRef50_A8SJM7 Putative uncharacterized protein n=1 Tax=Parvimonas micra ATCC 33270 RepID=A8SJM7_9FIRM Length = 350 Score = 210 bits (534), Expect = 7e-53, Method: Compositional matrix adjust. Identities = 126/358 (35%), Positives = 211/358 (58%), Gaps = 17/358 (4%) Query: 12 MSGGVDSSVSAWLLQQQGYQVEGLFMKNWEED---DGEEYCTAAADLADAQAVCDKLGIE 68 MSGGVDS V+ LL ++GY+V G+ M + D E+ C + + + DA+ V + +G++ Sbjct: 1 MSGGVDSCVACHLLLKEGYEVIGVTMNLVPKGHLYDEEKGCCSLSSVMDAKIVAEAMGVK 60 Query: 69 LHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGADYIATGH 128 +T++F E+ V E F+ EY G TPNP + CNK IKF +F++ L AD+I+TGH Sbjct: 61 HYTMSFREEFDRKVIENFVREYSLGYTPNPCVACNKYIKFNSFVD-KIRPLKADFISTGH 119 Query: 129 YVRRADVDGKSRLL--RGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQVRKIAEDLG 186 Y + +R L R DS KDQ+YFLY S E ++++LFP+ +LEK +VR+IA+D Sbjct: 120 YAKVEFDKNYNRYLLKRAKDSKKDQTYFLYNTSQEVLSKTLFPLADLEKEKVRQIAKDEN 179 Query: 187 LVTAKKKDSTGICFIGERKFREFLGRYLP--AQPGKIITVDGDEIGEHQGLMYHTLGQRK 244 ++T KKDS ICF+ R F+ + P + G + +G+++G+H+G++Y+T+GQRK Sbjct: 180 ILTYSKKDSEEICFVQNRDHGLFIKQRNPELIKEGYFVDENGNKLGKHKGIVYYTVGQRK 239 Query: 245 GLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLHWVDREPFTGTM 304 GLGI K +V + +N + ++ + L + ++ +++ + + Sbjct: 240 GLGIALGKR-----VFVSKINAIDNTVTLS---DEDALYKNKIRIREENFIPFDALEKPL 291 Query: 305 RCTVKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTPGQSAVFYNGEVCLGGGIIEQ 362 +VK R+ Q++ + ++D + V F++ V A GQSAVFY ++ +GGGII++ Sbjct: 292 EVSVKVRHGQSETKGLLFYKNND-LFVEFEKQVRAPNKGQSAVFYLDDIVVGGGIIDE 348 >UniRef50_Q5K850 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase, putative n=2 Tax=Filobasidiella neoformans RepID=Q5K850_CRYNE Length = 478 Score = 209 bits (532), Expect = 1e-52, Method: Compositional matrix adjust. Identities = 126/404 (31%), Positives = 210/404 (51%), Gaps = 61/404 (15%) Query: 8 VIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWE-------------------------- 41 V VGMSGGVDS+ + +L++ ++ +FM+NW+ Sbjct: 72 VTVGMSGGVDSATTLRILREFPIHLDVVFMRNWDPLLSESPPESSLPPSPISLAYSSGST 131 Query: 42 --EDDGEEYCTAAADLADAQAVCDKLGI---ELHTVNFAAEYWDNVFELFLAEYKAGRTP 96 + C D D V ++GI + V+ + EYW VFE + ++ G TP Sbjct: 132 SNREQNLSPCQWERDWNDVLKVATQVGIPKDSIKLVDLSKEYWSRVFEPAVGVWERGGTP 191 Query: 97 NPDILCNKEIKFKAFLEFAAEDLGADYIATGHYVRRADVD-----GKSRLLRGLDSNKDQ 151 NPD+ CN+EIKF A L+ + ++ATGHY R A V G S+LLR +D +KDQ Sbjct: 192 NPDVDCNREIKFGALLDVLPKK-DRHFLATGHYGRVAHVPLLSHPGPSKLLRAVDKSKDQ 250 Query: 152 SYFLYTLSHEQIAQSLFPVGELEKPQVRKIAEDLGLVTAKKKDSTGICFIGER-KFREFL 210 +Y+L ++ +Q+++++ P+G L K VR++AE GL AKK++S G+CFIGER KF +F+ Sbjct: 251 TYYLSQMTEQQLSRAILPLGSLLKTDVRRLAEHWGLPNAKKEESMGVCFIGERGKFGDFI 310 Query: 211 GRYL-PAQPGKIITVDGDEIGEHQGLMYHTLGQRKGLGIGGTKEGTEEPWYVVDKDV--E 267 +Y P + G ++ + G+ + EH+GL Y+T+GQR + +P +V K V + Sbjct: 311 SQYTSPPESGYLVNLSGERLAEHKGLWYYTIGQRARVA------NQLKPMFVAKKGVGEK 364 Query: 268 NNILVVAQGHEHPRLMSVGLIAQQLHWVD---------REPFTGTMRCTVKTRYRQTDIP 318 ++V G +HP L+ + HW+ +EP + ++ R+R + Sbjct: 365 GTDILVVPGSDHPMLLCKSVHTSDFHWIHDTFPRELLVKEP----EKVGIQVRHRMNPVG 420 Query: 319 CTVKALDDDR-IEVIFDEPVAAVTPGQSAVFYNGEVCLGGGIIE 361 + + + + V F++P+ V+PGQ ++ CLG G+I+ Sbjct: 421 GRIVVGGNVKDVTVEFNDPIVGVSPGQVVAIWHDGWCLGSGVID 464 >UniRef50_Q6AIZ6 tRNA-specific 2-thiouridylase mnmA n=1 Tax=Desulfotalea psychrophila RepID=MNMA_DESPS Length = 344 Score = 208 bits (530), Expect = 2e-52, Method: Compositional matrix adjust. Identities = 127/353 (35%), Positives = 189/353 (53%), Gaps = 19/353 (5%) Query: 10 VGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYCTAAADLADAQAVCDKLGIEL 69 + MSGGVDS+ +A L +Q+G V G FMK + D Y T ++ + KL I+L Sbjct: 8 IAMSGGVDSTATAILQKQKG-PVLGFFMKLNQPD----YETQRDRVSQ---IAQKLDIKL 59 Query: 70 HTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGADYIATGHY 129 ++ E+ + V + F A Y G TPNP I+CNKEIKF F + A G + IATGHY Sbjct: 60 EIIDLTEEFQEYVLKYFSASYFKGLTPNPCIICNKEIKFGLFQQ-AILRQGVERIATGHY 118 Query: 130 VRRADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQVRKIAEDLGLVT 189 + +L +G+D +KDQSYFL LS EQ+A S+FP+G + K + + E G Sbjct: 119 AQIHKTAAGYQLHKGVDPHKDQSYFLSRLSQEQLAHSIFPLGGMHKGAIYDLVEAHGFHD 178 Query: 190 AKKKDSTGICFIGERKFREFLGRY--LPAQPGKIITVDGDEIGEHQGLMYHTLGQRKGLG 247 + +S +CF+ + +FL + A G I+ DG +G+H+GL +T+GQR+GLG Sbjct: 179 FRGTESQDVCFLEQDNVVDFLEQTAEFSASSGNIVMNDGKILGKHKGLHRYTVGQRRGLG 238 Query: 248 IGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLHWVDREPFTGTMRCT 307 I P YV++ DV+NN ++V E+ +L + +HW+ + + + Sbjct: 239 I-----SYPVPLYVINLDVKNNNVIVG---ENEQLFHKTMAISDIHWISQPEREDLLHAS 290 Query: 308 VKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTPGQSAVFYNGEVCLGGGII 360 V R +V +++R VIFDEP A+TPGQ A Y LG G+I Sbjct: 291 VHIRSTHKGAQASVILKENNRASVIFDEPQRAITPGQFATIYKDTQVLGSGVI 343 >UniRef50_A9V8Y1 Predicted protein n=1 Tax=Monosiga brevicollis RepID=A9V8Y1_MONBE Length = 495 Score = 207 bits (528), Expect = 4e-52, Method: Compositional matrix adjust. Identities = 117/302 (38%), Positives = 160/302 (52%), Gaps = 15/302 (4%) Query: 29 GYQVEGLFMKNWEEDDGEEYCTAAADLADAQAVCDKLGIELHTVNFAAEYWDNVFELFLA 88 G++V G+FM+ W+E D CTA D Q + +LGI V+F EYW +VF++ L Sbjct: 10 GHEVTGVFMRTWDELDETGVCTAEGDWRHVQDIAQRLGIPCKRVDFVQEYWHSVFQVMLD 69 Query: 89 EYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGADYIATGHYVRRADVDGK----SRLLRG 144 E AG TPNPDILCN+ IKF AF FA + LGAD +A GHY R VD + RLLRG Sbjct: 70 ELAAGATPNPDILCNRHIKFDAFYHFARDQLGADRVAMGHYAR---VDEREPDMPRLLRG 126 Query: 145 LDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQVRKIAEDLGLV-TAKKKDSTGICFIGE 203 D NKDQSYFL L + + FP+G L K +V+ +A G A +++S G+CF+G+ Sbjct: 127 CDDNKDQSYFLAGLPVHVLRHAAFPLGHLTKDRVKALAAAAGFSDVAGQRESMGLCFVGK 186 Query: 204 RKFREFLGRYLPAQPGKIITVD-GDEIGEHQGLMYHTLGQRKGLGIGGTKEGTEEPWYVV 262 R+F + +YLP +PG + ++ G ++G L T GQ L +G YV Sbjct: 187 RRFGALVQQYLPPRPGVFVHLESGRQLGPVTDLNVITFGQSARL------DGQPVRCYVA 240 Query: 263 DKDVENNILVVAQGHEHPRLMSVGLIAQQLHWVDREPFTGTMRCTVKTRYRQTDIPCTVK 322 KD+ V +G HP L + +HW P V+ R+R PC V Sbjct: 241 GKDMTAGAAYVVEGLHHPCLHARAFALSNVHWTHPPPQDVEANLHVRIRHRGQLHPCAVG 300 Query: 323 AL 324 L Sbjct: 301 PL 302 >UniRef50_A5E201 Putative uncharacterized protein n=1 Tax=Lodderomyces elongisporus RepID=A5E201_LODEL Length = 509 Score = 207 bits (526), Expect = 7e-52, Method: Compositional matrix adjust. Identities = 131/404 (32%), Positives = 193/404 (47%), Gaps = 57/404 (14%) Query: 7 KVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYCTAAADLADAQAVCDKLG 66 ++I+ MS GVDSS+ A L + V G++M NW + CT D D Q VC +L Sbjct: 90 RIIIAMSSGVDSSLCAALYASKYKNVHGIYMANWRQSSQ---CTER-DWRDVQTVCKQLD 145 Query: 67 IELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGAD---- 122 I +N EYW NVF+ + Y G TPNPD+ CN+ +KF E E G + Sbjct: 146 ISCERINLELEYWQNVFQPMIDGYAKGLTPNPDVGCNRYVKFGRLCEIMEERYGNEKGKW 205 Query: 123 YIATGHYVR---------------------------RADVDGKS----RLLRGLDSNKDQ 151 ++ TGHY R D D K+ LLRGL + KDQ Sbjct: 206 WLVTGHYARVMKKIVKEPSLAHENVDTSIVKQTPTPTNDTDFKANEEYHLLRGLSTRKDQ 265 Query: 152 SYFLYTLSHEQIAQSLFPVGELEKPQVRKIAEDLGLVTAKKKDSTGICFI---GERKFRE 208 SY+L T+S + L P+G K Q R++A++ L T++K D G+CF+ FR+ Sbjct: 266 SYYLSTISPLILPHLLLPLGHQLKSQTRQLAQNYKLHTSQKPDLQGLCFVEPSNHSNFRD 325 Query: 209 FLGRYLPAQPGKIITVDGDEIGEHQGLMYHTLGQRKGLGIGGTKEGTEEPWYVVDKDVEN 268 FL Y+ PG I+T DG G+H+GL + T+GQ+ + + + W+V +K+V Sbjct: 326 FLAEYIEPNPGNIVTTDGKVWGKHKGLWHATIGQKSSVLMPQGDPQYKGVWFVAEKNVAK 385 Query: 269 NILVVAQGHEHPRLMSVGLIAQQLHWVDREPFTGTMRCTVKTRYRQTDIPCTVKALDDDR 328 N +V+ +GH++P L S + WV ++ ++ + + KA+ R Sbjct: 386 NEIVIVRGHDNPLLFSQVVTLDTCEWVYEWEKVQQLKEESAVSFQFSSLS---KAILVKR 442 Query: 329 IEVIFD------------EPVAAVTPGQSAVFYNGEVCLGGGII 360 I V+ + EPV AV PGQ V Y G LG G+I Sbjct: 443 ITVLGNKQFGKQLKIELIEPVRAVAPGQQGVLYRGNQVLGSGMI 486 >UniRef50_A5IJQ4 tRNA-specific 2-thiouridylase mnmA n=7 Tax=Thermotogaceae RepID=MNMA_THEP1 Length = 358 Score = 206 bits (525), Expect = 9e-52, Method: Compositional matrix adjust. Identities = 129/365 (35%), Positives = 205/365 (56%), Gaps = 20/365 (5%) Query: 7 KVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEED------DGEEYCTAAADLADAQA 60 KV V +SGGVDS+V+ +LL ++G++V+ MK E++ ++ C + +D ADA Sbjct: 2 KVGVALSGGVDSAVALYLLLKEGHEVKAFHMKTKEDEFFIRKEIKKKVCCSPSDTADAMR 61 Query: 61 VCDKLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLG 120 + LG+E+ V+ + + V E F ++ G TPNP + CN+ +KF +++ + G Sbjct: 62 IAHFLGVEIEIVDVKEIFREKVIEPFKSDLLKGLTPNPCVHCNRFVKFGYLMDYVL-NQG 120 Query: 121 ADYIATGHYVR--RADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQV 178 D A+GHY R ++ G+ + +G+D KDQSYFL + +I + +FP G K ++ Sbjct: 121 FDAFASGHYARIEFSEKYGRKVIKKGVDLKKDQSYFLARIEPWRIERLIFPNGIYTKEEI 180 Query: 179 RKIAEDLGLVTAKKKDSTGICFIGERKFREFLG-RYLPAQPGKIITVDGDEIGEHQGLMY 237 RKIAE+ G+ AKK++S +CFI + FL + + G +IT +G+ +G H G Sbjct: 181 RKIAEEAGIHVAKKQESQDVCFIPDGSIENFLKDEGITLKEGDLITPEGEVVGRHFGYPL 240 Query: 238 HTLGQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLHWVDR 297 +T+GQRKG I E +YV K E N++VV+ + + GLIA+ W Sbjct: 241 YTIGQRKGFKI----EKFGRRYYVRGKIPEKNVVVVSDLED---VFFSGLIAEDPVWHVE 293 Query: 298 EPFTGTMRCTVKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTPGQSAVFYNGEVCLGG 357 P +C + R + + P VK L D+ +EV F++ V AVTPGQ A FY+G+ LGG Sbjct: 294 VP--EEFKCVCRVRKKSEEAPAVVK-LRDNEVEVRFEKKVFAVTPGQIAAFYDGDTLLGG 350 Query: 358 GIIEQ 362 II++ Sbjct: 351 AIIKE 355 >UniRef50_B8LDI7 Predicted protein (Fragment) n=1 Tax=Thalassiosira pseudonana CCMP1335 RepID=B8LDI7_THAPS Length = 509 Score = 206 bits (524), Expect = 1e-51, Method: Compositional matrix adjust. Identities = 140/410 (34%), Positives = 203/410 (49%), Gaps = 58/410 (14%) Query: 3 ETAKKVIVGMSGGVDSSVSAWLLQQ--QGYQVEGLFMKNWEEDDGEEYCTAAAD-----L 55 T +++V MSGGVDSS + ++ + G +V GL M NW D + + A + Sbjct: 92 RTRPRIVVAMSGGVDSSYTTIIMYKICDGIEVIGLHMSNWNALDEDPDISNATNTREKEY 151 Query: 56 ADAQAVCDKLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFA 115 DAQ+V L I LH V+FA+EYW VFE F+ PNPD CN IKF A ++A Sbjct: 152 TDAQSVAQHLSIPLHRVSFASEYWIQVFEPFVESLAELTMPNPDYGCNTFIKFGAMKKYA 211 Query: 116 AEDLGADYIATGHYVR------RADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFP 169 + AD++ATGHY + D D D +KDQSYFL + E +FP Sbjct: 212 MGQMNADFVATGHYAQLWHRGYTGDNDSSGVF---PDRSKDQSYFLSGVKGEAFRNVIFP 268 Query: 170 VGELEKPQ----VRKIAEDLGLVTAKKKDSTGICFIGERKFREFLGRYL--PAQPGKIIT 223 +G L K Q VR IA + TA K+DS GICFIG+R F +F+ +YL P PG + Sbjct: 269 LGHLAKSQTQQTVRDIAHQAAIPTASKRDSMGICFIGKRNFGQFVSQYLPEPPAPGTFVD 328 Query: 224 VD-GDEIGEHQGLMYHTLGQRKGLGIGGTKEGTEEPWYVVDKDV---ENNILVVAQGHEH 279 VD G+ +G H+G M++T+GQ G G ++V K + N + V H Sbjct: 329 VDTGEIVGYHEGSMHYTIGQ------GAKISGASARYFVCGKGSTGDDGNTVFVCNSTHH 382 Query: 280 PRLMS--VGLIAQQLHWV------DREPFTGT---------MRCTVKTRYRQTDIPCTV- 321 P L + + + +W+ D + F ++ +TR+ Q CTV Sbjct: 383 PSLYTDELSVDFDAFNWIGLGEKSDTDSFGHVPYPLVEGRPIKLLARTRHLQPLAQCTVS 442 Query: 322 --KALDDD---RIEVIFDEPVAAVTPGQSAVFYNGE---VCLGGGIIEQR 363 ++ D + ++ V F++P+ A+TP Q Y G +CLGGG I+ R Sbjct: 443 WQRSRDANSLGKLTVQFEKPMRAITPCQVVSLYAGSDGLICLGGGPIKGR 492 >UniRef50_C4F7E5 Putative uncharacterized protein n=2 Tax=Collinsella RepID=C4F7E5_9ACTN Length = 409 Score = 204 bits (519), Expect = 4e-51, Method: Compositional matrix adjust. Identities = 142/414 (34%), Positives = 201/414 (48%), Gaps = 68/414 (16%) Query: 4 TAKKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYCTAAADLADAQAVCD 63 T K+V+V MSGGVDSSV+A+LL QQGY G M D C + +D DA A+C Sbjct: 2 TRKRVLVAMSGGVDSSVTAYLLTQQGYDCLGATML-LHGDAAPGACGSGSDADDAAAICA 60 Query: 64 KLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGADY 123 +LG ++ + +V E F+ Y+ GRTPNP I CN+ +KF A L +A E D+ Sbjct: 61 RLGFPHEVIDMRETFERHVVEKFVRTYETGRTPNPCIDCNRHLKFDALLSYAREH-DCDF 119 Query: 124 IATGHYVRRADV--DGKSRLLRG-------------------------LDSNKDQSYFLY 156 IATGHY R + G + RG LD +KDQSY LY Sbjct: 120 IATGHYGRIGTLAEGGGGSVRRGEEQEFVARITARTGASNAVHTLSCALDPSKDQSYVLY 179 Query: 157 TLSHEQIAQSLFPVGELEKPQ-VRKIAEDLGLVTAKKKDSTGICFIGERKFREFLGRY-- 213 +L+ E++A++L P+G L K + VR+IA + G A K+DS GICF+ + F ++ + Sbjct: 180 SLTQERLARTLLPLGGLFKERDVRRIAREQGFENAGKRDSQGICFVPDNDFATYIEKRNG 239 Query: 214 LPAQPGKIITVDGDEIGEHQGLMYHTLGQRKGLGIGGTKEGTEEPWYVVDKDVENNILVV 273 P G I+ G +G H G + +T+GQRKGLG+ P YV D N + + Sbjct: 240 APLPEGDIVNTSGHVLGRHHGAIRYTVGQRKGLGV-----ACAHPVYVTGIDAVANTVTL 294 Query: 274 AQGHEHPRLMSVGLIAQQLHW----------VDREPFTGTMRCTVKTRYRQTDIPCTVK- 322 E LM+ GL+A W +D TG + + K RYR P ++ Sbjct: 295 G---EVADLMASGLVADDWIWSAPANVMEELLDEAGETG-LPVSAKIRYRHPAQPARLRR 350 Query: 323 ----------------ALDDDRIEVIFDEPVAAVTPGQSAVFYNGEVCLGGGII 360 + E+IFD P + PGQ+ V Y G++ LGGG + Sbjct: 351 ATCGTTGSSAGANAIAENAANAFELIFDSPERGIAPGQAVVAYAGDIVLGGGTV 404 >UniRef50_C0A9P4 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase (Fragment) n=1 Tax=Opitutaceae bacterium TAV2 RepID=C0A9P4_9BACT Length = 369 Score = 204 bits (518), Expect = 5e-51, Method: Compositional matrix adjust. Identities = 131/367 (35%), Positives = 171/367 (46%), Gaps = 65/367 (17%) Query: 54 DLADAQAVCDKLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLE 113 D+ DA+ V D+LGI VN EY D V L Y+ G TPNPDI+CN+EIKF F Sbjct: 5 DIEDARRVADQLGIPFRVVNLMDEYRDRVVAYLLDGYRRGLTPNPDIMCNREIKFGVFRA 64 Query: 114 FAAEDLGADYIATGHYVRR----------------------------------------- 132 +A D G +ATGHY RR Sbjct: 65 WA-RDHGFTAVATGHYARRVPLSAADTAPAACASTVGASLAKPASANNAQSAIVAPSGCA 123 Query: 133 -----ADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQVRKIAEDLGL 187 A L G D NKDQSYFL L+ Q+A + FP+G++EKP++R++A + GL Sbjct: 124 GFASEAPAPSAWALHEGADPNKDQSYFLALLTQAQLADARFPIGDIEKPELRRLAREAGL 183 Query: 188 VTAKKKDSTGICFIGERKFREFLGRYLPAQPGKII-TVDGDEIGEHQGLMYHTLGQRKGL 246 TA KKDS GICFIG+ K ++FL +Y+P PG I+ D IGEH+GL Y TLGQRKG+ Sbjct: 184 ATADKKDSQGICFIGQVKMQDFLRQYVPDNPGPIVRATDQRIIGEHRGLHYFTLGQRKGI 243 Query: 247 GIGGTKEGTEEPWYVV--DKDVENNILVVAQGHEHPRLMSVGLIAQQLHW--VDREPFT- 301 G+ T+ YVV + +N + V G + P L + L W D P Sbjct: 244 GV---PSNTDNKAYVVTGKRSDDNTLFVAFDGADAPGLFQTEVRVHSLQWNTPDGAPPAF 300 Query: 302 ------GTMRCTVKTRYRQTDIPCTVKALDD---DRIEVIFDEPVAAVTPGQSAVFYNGE 352 G + RYR IP T+ D + F+ P + GQ Y G Sbjct: 301 LTSGGPGPHALEGRVRYRDPRIPLTITLTPDLAPATAHIRFETPQRGLASGQILALYAGP 360 Query: 353 VCLGGGI 359 LGG + Sbjct: 361 RLLGGAV 367 >UniRef50_A9EXM5 tRNA-specific 2-thiouridylase mnmA n=4 Tax=Myxococcales RepID=MNMA_SORC5 Length = 385 Score = 204 bits (518), Expect = 5e-51, Method: Compositional matrix adjust. Identities = 130/372 (34%), Positives = 194/372 (52%), Gaps = 21/372 (5%) Query: 3 ETAKKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWE-EDDG--EEYCTAAADLADAQ 59 + +V + MSGGVDSSV+A L GY+V G+ + W+ DDG + C A D DA+ Sbjct: 19 SSGARVFIAMSGGVDSSVAAARLCDAGYEVVGVTLHLWDYPDDGSVKSRCCAPEDQHDAR 78 Query: 60 AVCDKLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDL 119 V D LGI +T + A + ++V + F+ Y AG TP+P + CN+ +K + A E L Sbjct: 79 RVADHLGIPHYTFDRRALFREHVVDPFVEAYLAGETPSPCVACNRSVKLRELFPLA-ERL 137 Query: 120 GADYIATGHYVRRADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQVR 179 G ++ATGHY R +G +RL RG D +KDQSYFL+ L +++++ LFP+G+ K +VR Sbjct: 138 GVSWVATGHYARVVLEEGGARLYRGRDRHKDQSYFLHMLRSDELSRLLFPLGDSTKDEVR 197 Query: 180 KIAEDLGLVTAKKKDSTGICFIGERKFREFLGRYLP--AQPGKIITVDGDEIGEHQGLMY 237 A GL A+K +S +CFI ++ F+ +PG I+ DG +G H G+ Sbjct: 198 AEAIARGLPGAEKGESQELCFIPSGRYAPFVADRAADRLRPGPIVDRDGRVVGSHGGVHG 257 Query: 238 HTLGQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLHWVDR 297 T+GQRKG+G+ P +VV D + + + + L + G W D Sbjct: 258 FTVGQRKGIGV-----SLGRPAFVVGLDAASGAVHLGDEGD---LYAAGAEIADAVWCDD 309 Query: 298 EPFTGTMRCTVKTRYRQTDIPCTVKALDD-----DRIEVIFDEPVAAVTPGQSAVFYNGE 352 F + V+ R R P ++ D + F PV +V+PGQ AV Y G+ Sbjct: 310 AVF--PLEAEVRVRARHEAAPGIIERRRDPATGAESFVARFASPVRSVSPGQMAVVYRGD 367 Query: 353 VCLGGGIIEQRL 364 LGGG I+ L Sbjct: 368 RVLGGGRIKAAL 379 >UniRef50_C9RQ01 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase n=1 Tax=Fibrobacter succinogenes subsp. succinogenes S85 RepID=C9RQ01_FIBSS Length = 366 Score = 203 bits (517), Expect = 7e-51, Method: Compositional matrix adjust. Identities = 139/377 (36%), Positives = 206/377 (54%), Gaps = 39/377 (10%) Query: 6 KKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEED------DGEEYCTAAA---DLA 56 K+V VG+SGGVDS++SA+LL++QGY+V G+ M W++ +G E C + ++ Sbjct: 5 KRVAVGLSGGVDSALSAYLLKKQGYEVVGMTMATWDDSVKMPAVEGREGCYGPSEDKNIE 64 Query: 57 DAQAVCDKLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAA 116 +A+ V ++LGI + V A +Y V + F AEY+AGRTPNP + CN+ IKF A L+ AA Sbjct: 65 EAKLVAERLGIPHYVVPVAEDYKREVLDYFRAEYRAGRTPNPCVRCNQSIKFGA-LQHAA 123 Query: 117 EDLGA--DYIATGHYVRRADVDGKSR----LLRGLDSNKDQSYFLYTLSHEQIAQSLFPV 170 LG DY ATGHY R +D K+ L LD +KDQ+YFL LS EQ++ +FP+ Sbjct: 124 RKLGIDFDYFATGHYAR---LDFKNPDVPFLYEALDEHKDQTYFLSRLSAEQLSTVIFPL 180 Query: 171 GELEKPQVRKIAEDLGLVT-AKKKDSTGICFIGERKFREFLGRYLPAQPGKIITVDGDEI 229 G ++K V+ +A+++G A K++S G+ L PG I V+G + Sbjct: 181 GGMQKADVKALAKEIGWDDFATKRESQDFIECGD---YSVLFDESDNVPGDFIDVNGKVL 237 Query: 230 GEHQGLMYHTLGQRKGLGIGGTKEGTEEPWYVVDKDVENNILVV----AQGHEHPRLMSV 285 G+H+G++++T+GQRKGL IGG EP YVV D +N +++ A + + Sbjct: 238 GKHKGIVHYTIGQRKGLNIGGQA----EPLYVVAIDAHHNQVILGPRSALSCTEVSAVDL 293 Query: 286 GLIAQQLHWVDREPFTGTMRCTVKTRYRQTDIPCTVKALDD--DRIEVIFDEPVAAVTPG 343 L+ + + +EP T +R K + ALD I V FDEP A PG Sbjct: 294 NLMVSETSPLLKEPLTAHIRLGHK------GATARITALDTAAGTISVKFDEPQFASAPG 347 Query: 344 QSAVFYNGEVCLGGGII 360 Q V Y + + II Sbjct: 348 QVLVLYADKGVVASAII 364 >UniRef50_B2RHP0 tRNA-specific 2-thiouridylase mnmA n=5 Tax=Bacteroidales RepID=MNMA_PORG3 Length = 361 Score = 203 bits (517), Expect = 7e-51, Method: Compositional matrix adjust. Identities = 125/363 (34%), Positives = 194/363 (53%), Gaps = 22/363 (6%) Query: 12 MSGGVDSSVSAWLLQQQGYQVEGLFMK-NWEEDDGEEYCTAAADLADAQAVCDKLGIELH 70 +SGGVDSSV L ++GY+ +++ E++DG C A D+ + + G Sbjct: 7 VSGGVDSSVVVHRLCEEGYKPAIFYIRIGMEDEDGYIDCPAEEDIELTTLIARRYGCPFE 66 Query: 71 TVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGADYIATGHYV 130 V+ EYW+ V + + G TPNPD++CNK IKF F E D IATGHY Sbjct: 67 VVDLHKEYWERVVSYTVETVRRGLTPNPDMMCNKLIKFGCFEERWGYQF--DRIATGHYA 124 Query: 131 RRADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQVRKIAEDLGLVTA 190 ++GK+ L D KDQ+ FL ++ QI++ +FP+G L K +VR IA GL +A Sbjct: 125 TTDLLNGKTYLSTAKDPVKDQTDFLAQINFAQISKLMFPIGHLLKSEVRAIANAAGLPSA 184 Query: 191 KKKDSTGICFIGERKFREFLGRYLPAQPGKIITVD-GDEIGEHQGLMYHTLGQRKGLGIG 249 K+KDS GICF+G+ + +F+ RYL + G+II ++ G IG HQG +HT+GQRKGLG+ Sbjct: 185 KRKDSQGICFLGKIDYNDFIERYLGKKEGRIIELETGKVIGRHQGYWFHTIGQRKGLGLS 244 Query: 250 GTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLHWVDREPFTG------- 302 G PW+VV KD++ NI++V++G++ + + ++ + + Sbjct: 245 GG------PWFVVKKDIKRNIILVSRGYDPDTQYGKTIEMETFDFITEDAYEAGYWNRED 298 Query: 303 TMRCTVKTRYR-QTDIPCTVKALDDDRIEVIFDEPVAAVTPGQSAVFYNGE--VCLGGGI 359 T K R+ + K R+E +E + + PGQ V Y+ + +C G G+ Sbjct: 299 ATPVTFKIRHTPEFTRGLLYKGEKGYRLES--EERIQGIAPGQYCVIYDEDHHLCYGSGM 356 Query: 360 IEQ 362 I + Sbjct: 357 ITK 359 >UniRef50_Q8A2F1 tRNA-specific 2-thiouridylase mnmA 2 n=8 Tax=Bacteroides RepID=MNMA2_BACTN Length = 370 Score = 203 bits (517), Expect = 8e-51, Method: Compositional matrix adjust. Identities = 132/384 (34%), Positives = 199/384 (51%), Gaps = 40/384 (10%) Query: 1 MSETAKKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYCTAAADLADAQA 60 M E K+V++GMSGG DSSV+A L + GY+V G+ + +E +D EY L DA+ Sbjct: 1 MMEENKRVLLGMSGGTDSSVAAMRLLEAGYEVTGVTFRFYELNDSTEY------LEDARH 54 Query: 61 VCDKLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLG 120 + ++LGI T + + + E F+ EY G TP P LCN +K+ L A+++G Sbjct: 55 LAERLGIRHITYDAREIFRKQIIEYFVHEYMVGHTPVPCTLCNNYLKW-PLLSKIADEMG 113 Query: 121 ADYIATGHYVRRADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQVRK 180 YIATGHYVR+ VD + DS+KDQ++FL+ L + + + L P+G++ K + R Sbjct: 114 IFYIATGHYVRKVKVDDTCYITYAADSDKDQTFFLWGLKQDILRRMLLPMGDITKVEARA 173 Query: 181 IAEDLGL-VTAKKKDSTGICFIGERKFREFLGRYLPA--QP------------------- 218 A + G A K+DS G+CF +R FL +L + QP Sbjct: 174 FAAERGFQKVAVKRDSLGVCFC-PMDYRSFLKMWLVSNCQPQVSVGQPQVSAGQTWSAEV 232 Query: 219 --GKIITVDGDEIGEHQGLMYHTLGQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQG 276 G+ + GD I H+G ++T+GQR+GLGI + +V + E N +V+A Sbjct: 233 RRGRFVDEKGDFIAWHEGYPFYTVGQRRGLGIHLNR-----AVFVKEIRPEKNEVVLASL 287 Query: 277 HEHPRLMSVGLIAQQLHWVDREPFTGTMRCTVKTRYRQTDIPCTVKALDDDRIEVIFDEP 336 L ++ + + V+RE G VK RYR+ + CTV D+ + V EP Sbjct: 288 QA---LEKTEMLLKDWNIVNRERLLGHADIIVKIRYRKQENHCTVTVTLDNFLHVQLHEP 344 Query: 337 VAAVTPGQSAVFYNGEVCLGGGII 360 + A+ GQ+A FY + LGGGII Sbjct: 345 LTAIASGQAAAFYKDGLLLGGGII 368 >UniRef50_A8F5H8 tRNA-specific 2-thiouridylase mnmA n=3 Tax=Thermotogaceae RepID=MNMA_THELT Length = 349 Score = 202 bits (515), Expect = 1e-50, Method: Compositional matrix adjust. Identities = 130/367 (35%), Positives = 199/367 (54%), Gaps = 28/367 (7%) Query: 7 KVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEED------DGEEYCTAAADLADAQA 60 K+ + +SGGVDS+V+ + L+ +GY++ MK +++ + C + +D DA+ Sbjct: 2 KIGILLSGGVDSAVALYQLKNEGYEIVAYHMKTMKDEFFLNRQVKHKICCSPSDTVDAKL 61 Query: 61 VCDKLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLG 120 + G+ L VN + + + +L EY GRTPNP CN+ IKF ++ ED G Sbjct: 62 IAKTAGVPLKVVNLHEIFKEKIITYYLQEYTRGRTPNPCYFCNRFIKFGYLMDLMIED-G 120 Query: 121 ADYIATGHYVRRADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQVRK 180 D I++GHY R VDGK LL+ LD KDQSYFL ++ E++ + +FP G+ K ++R Sbjct: 121 VDVISSGHYARV--VDGK--LLKALDKEKDQSYFLASIEKERLKKIVFPNGDKTKDEIRD 176 Query: 181 IAEDLGLVTAKKKDSTGICFI--GERKFREFLGRYLPAQPGKIITVDGDEIGEHQGLMYH 238 IA+ G+ K +S +CFI G++K R F + + + G I G +IGEH GL+ + Sbjct: 177 IAKKAGIHVHSKAESQDLCFIPDGDQK-RFFEEQGIKIKSGPIFDKYGKKIGEHTGLINY 235 Query: 239 TLGQRK-GLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLHWVDR 297 T+GQRK G+ G E YV + N L+V + + L +D+ Sbjct: 236 TIGQRKIGVSAG-------ERVYVTRICADRNALIVGNEKDVQSDKFSVIDFNLLVDIDK 288 Query: 298 EPFTGTMRCTVKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTPGQSAVFYNGEVCLGG 357 TVK R T++PC V +L++ R+ V PV AV PGQ+AVFY G++ +G Sbjct: 289 -----NFEATVKVRKNSTEVPCKV-SLENHRVIVKTTMPVFAVAPGQAAVFYRGDIVIGA 342 Query: 358 GIIEQRL 364 GIIE+ L Sbjct: 343 GIIEKIL 349 >UniRef50_C1FJ72 Predicted protein n=1 Tax=Micromonas sp. RCC299 RepID=C1FJ72_9CHLO Length = 478 Score = 202 bits (515), Expect = 1e-50, Method: Compositional matrix adjust. Identities = 112/294 (38%), Positives = 161/294 (54%), Gaps = 31/294 (10%) Query: 7 KVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGE---EYCTAAADLADAQAVCD 63 KV V +SGGVDSSV+ LL+ G+ +++ W +D + C DL A+ VC+ Sbjct: 17 KVAVLLSGGVDSSVALTLLKAAGHDCVAFYLQIWFVEDFRNTWDACPWEDDLNVARGVCE 76 Query: 64 KLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGADY 123 L + L V +YWD V + + + GRTPNPD+LCN +KF AF ++ + ++ Sbjct: 77 HLDVPLEVVPLTNQYWDLVVKHSIEQISRGRTPNPDMLCNSRVKFGAFTDWLETNRAGEF 136 Query: 124 --IATGHYVRRADVDG-------------------KSRLLRGLDSNKDQSYFLYTLSHEQ 162 +A+GHY V G RL+ D+ KDQ+YFL LS Q Sbjct: 137 HRVASGHYAAMDRVQGILADTLHGDDGMNGTSRRHPCRLIMSGDARKDQTYFLAHLSQRQ 196 Query: 163 IAQSLFPVGELEKPQVRKIAEDLGLVTAKKKDSTGICFIGERKFREFLGRYLPAQPGKII 222 +A FP+G L K Q+R+IA GL A++KDS GICF+G+ KF EF+ +L +PG I+ Sbjct: 197 LAALTFPIGGLPKTQIREIARSAGLPNAERKDSQGICFLGKVKFSEFVAEHLGERPGAIV 256 Query: 223 TVD-GDEIGEHQGLMYHTLGQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQ 275 ++ G +G H G +HT+GQR GLG+ G PWYV KDV N++ V + Sbjct: 257 ELETGTRLGTHSGFWFHTIGQRSGLGLSGG------PWYVAAKDVPGNVVYVTR 304 >UniRef50_B0VEY5 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase n=1 Tax=Candidatus Cloacamonas acidaminovorans RepID=B0VEY5_9BACT Length = 382 Score = 202 bits (513), Expect = 2e-50, Method: Compositional matrix adjust. Identities = 125/350 (35%), Positives = 192/350 (54%), Gaps = 24/350 (6%) Query: 8 VIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEED-----DGEEYCTAAA---DLADAQ 59 V VG+SGG+DS+++A+LLQ+ GY+V G+ M+ ++E+ + C A ++ A Sbjct: 7 VAVGISGGIDSAMTAYLLQESGYRVIGITMQTYDENIEMDKTLKSGCFGPAQEENILSAS 66 Query: 60 AVCDKLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDL 119 + KLGIE + + E+ V + F Y G+TPNP ++CN IKF A L A L Sbjct: 67 LLWRKLGIEHYIIPLQEEFRHKVIDYFCETYIKGKTPNPCLVCNAYIKF-ALLPEKAHSL 125 Query: 120 GA--DYIATGHYVRRA--DVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEK 175 G DY ATGHY + + + ++ + D+NKDQSYFL LS EQ+AQ+LFP+G+ K Sbjct: 126 GLEFDYFATGHYAKIGFNNTLKRYQIRKAKDANKDQSYFLAFLSQEQLAQTLFPLGDYTK 185 Query: 176 PQVRKIAEDLGLV-TAKKKDSTGICFIGERKFREFLGRYLPAQPGKIITVDGDEIGEHQG 234 +++K+A G ++K+S + E L + PG+II + G IG+H+G Sbjct: 186 QEIKKMAIGKGFTELVERKESQDFL---QSSDLEVLFKPEDFNPGEIIDMQGKVIGKHKG 242 Query: 235 LMYHTLGQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLHW 294 ++ +T+GQR+ LGI G E P+YV+ D ENN +V+ L A ++W Sbjct: 243 IINYTIGQRRNLGISGMPE----PYYVLQIDAENNRIVLGPKE---YLFKKKCSATDMNW 295 Query: 295 VDREPFTGTMRCTVKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTPGQ 344 V R K R + + C V ++D+ IEV+F EP ++TPGQ Sbjct: 296 VSLPAPEKKFRAKAKIRQQHSPADCIVTPINDNTIEVVFKEPQLSITPGQ 345 >UniRef50_A8ES35 tRNA-specific 2-thiouridylase mnmA 1 n=5 Tax=Epsilonproteobacteria RepID=MNMA1_ARCB4 Length = 345 Score = 201 bits (512), Expect = 3e-50, Method: Compositional matrix adjust. Identities = 124/363 (34%), Positives = 199/363 (54%), Gaps = 27/363 (7%) Query: 4 TAKKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYCTAAADLADAQAVCD 63 + KKV+VGMSGG+DSSV+A++LQ +GY+VEG+++K DG +L + V Sbjct: 2 SKKKVMVGMSGGIDSSVTAYMLQNEGYEVEGIYLKLHNRTDGYH----EKNLGYIEDVAK 57 Query: 64 KLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGADY 123 L I+ + ++ A ++ V++ F+ Y G TPNP + CN++IKF A L+FA + GA Y Sbjct: 58 FLNIKYYILDLADKFSKEVYDYFVDSYLTGTTPNPCVKCNRQIKFGAMLDFAKQH-GASY 116 Query: 124 IATGHYVRRADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQVRKIAE 183 +ATGHY A DGK D KDQSYFL + + + +FP+ +K + K Sbjct: 117 LATGHY---AKTDGKF-FYEADDKTKDQSYFLSQVDKDALKYMMFPLSTYKKEDIVKFGA 172 Query: 184 DLGLVTAK---KKDSTGICFIGERKFREFLGRYLPA-QPGKIITVDGDEIGEHQGLMYHT 239 L + K K +S ICF+ E + + + ++ Q G ++ +G +G+H+G ++T Sbjct: 173 KLDVAYKKITEKSESQEICFV-ETVYTDVVKKHANIDQEGDVLDENGKVVGKHKGFAHYT 231 Query: 240 LGQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLH-WVDRE 298 +G+R+G T +G +EP +V + ++N +VV + L ++ L+ ++D Sbjct: 232 IGKRRGF----TVKGAQEPHFVTKLNPKDNTIVVGK---KEALEVNEVVGNNLNMFIDDT 284 Query: 299 PFTGTMRCTVKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTPGQSAVFYNGEVCLGGG 358 F+ C VK RYR PC V+ + D++ + EPV V GQ AVFY+ E +G Sbjct: 285 KFS----CNVKLRYRSVSTPCEVQ-IKDEKAYITLKEPVYGVAKGQLAVFYHEEKVIGSA 339 Query: 359 IIE 361 IE Sbjct: 340 WIE 342 >UniRef50_Q9ZJQ0 tRNA-specific 2-thiouridylase mnmA n=22 Tax=Campylobacterales RepID=MNMA_HELPJ Length = 342 Score = 201 bits (512), Expect = 3e-50, Method: Compositional matrix adjust. Identities = 132/364 (36%), Positives = 205/364 (56%), Gaps = 34/364 (9%) Query: 7 KVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMK-NWEEDDGEEYCTAAADLADAQAVCDKL 65 K+ V +SGGVDSS SA+ L++QG+++ G+++K + E + Y + +AQ C+ L Sbjct: 2 KIAVLLSGGVDSSYSAYSLKEQGHELVGIYLKLHASEKKHDLY------IKNAQKACEFL 55 Query: 66 GIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGADYIA 125 GI L ++F ++ V++ F+ Y+ G+TPNP LCN +KF L+ A + LG + IA Sbjct: 56 GIPLEVLDFQKDFKSAVYDEFINAYEEGQTPNPCALCNPLMKFGLALDHALK-LGCEKIA 114 Query: 126 TGHYVRRADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQVRKIAED- 184 TGHY R ++D S + LD KDQSYFLY L HE IA+ +FP+G+L K ++ +A + Sbjct: 115 TGHYARVKEIDKVSYIQEALDKTKDQSYFLYALEHEVIAKLVFPLGDLLKKDIKPLALNA 174 Query: 185 ---LGLVTAKKKDSTGICFIGERKFREFLGRYLPAQP-GKIITVDGDEIGEHQGLMYHTL 240 LG + K+S ICF+ E+ + + L +++ + G + + G+ IG H+G M +T+ Sbjct: 175 MPFLGTLET-YKESQEICFV-EKSYIDTLKKHVEVEKEGVVKNLQGEVIGTHKGYMQYTI 232 Query: 241 GQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLH----WVD 296 G+RKG + +G EP +VV D + N L+V + + L + L A+ + D Sbjct: 233 GKRKGFSV----KGALEPHFVVGIDAKKNELIVGKKED---LATHSLKAKNKSLTKDFKD 285 Query: 297 REPFTGTMRCTVKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTPGQSAVFYNGEVCLG 356 E F +K RYR V +L D IEV F EP V GQ+ V Y ++ LG Sbjct: 286 GEYF-------IKARYRSVPTKAFV-SLKDGMIEVEFKEPFYGVAKGQALVVYKDDILLG 337 Query: 357 GGII 360 GG+I Sbjct: 338 GGVI 341 >UniRef50_B1I677 tRNA-specific 2-thiouridylase mnmA n=1 Tax=Candidatus Desulforudis audaxviator MP104C RepID=MNMA_DESAP Length = 343 Score = 201 bits (511), Expect = 3e-50, Method: Compositional matrix adjust. Identities = 126/358 (35%), Positives = 186/358 (51%), Gaps = 26/358 (7%) Query: 8 VIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYCTAAADLADAQAVCDKLGI 67 V V +SGGVDSS +A L+++ G++V L M + A+A V LG+ Sbjct: 4 VAVALSGGVDSSTTALLMKEAGHRVFTLTMATNDRVA-----------AEAARVSAFLGL 52 Query: 68 ELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGADYIATG 127 H ++ + + V F A Y GRTPNP I CN+++K+ A E GADY ATG Sbjct: 53 PHHVLDISGLFEQRVIGPFCAAYLEGRTPNPCIACNRDLKYGTLFRQAVE-WGADYFATG 111 Query: 128 HY--VRRADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQVRKIAEDL 185 HY VR G+ LLR D KDQSY L+ L E++A+ L P+G+L K VR+ A Sbjct: 112 HYARVRFEPEPGRYVLLRARDPRKDQSYVLFYLDQERLARLLLPLGDLTKETVREKARAA 171 Query: 186 GLVTAKKKDSTGICFIGERKFREFLGRYL--PAQPGKIITVDGDEIGEHQGLMYHTLGQR 243 G + +S ICF+ +R F+ R G + G+ +G H+G+ ++T+GQR Sbjct: 172 G-IPFTAAESQEICFVAGDDYRTFIRRRCGQAVAEGPFVDRQGNVLGRHRGIPFYTIGQR 230 Query: 244 KGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLHWVDREPFTGT 303 +GLG+ P +V+ + E N ++V E L +A +H++ +P GT Sbjct: 231 RGLGLA-----LGRPVFVLGFNRERNAVIVGPEEE---LWHTAFLAVDVHYILPQPAGGT 282 Query: 304 MRCTVKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTPGQSAVFYNGEVCLGGGIIE 361 + + RYR P + D V+F++P A+TPGQ+AVFY GE +GGGII Sbjct: 283 L-IEAQIRYRAKAAPARLYPQPPDAARVVFEKPQRAITPGQAAVFYQGERVVGGGIIS 339 >UniRef50_A7ANM3 tRNA methyl transferase family protein n=1 Tax=Babesia bovis RepID=A7ANM3_BABBO Length = 665 Score = 200 bits (509), Expect = 7e-50, Method: Compositional matrix adjust. Identities = 130/375 (34%), Positives = 191/375 (50%), Gaps = 21/375 (5%) Query: 6 KKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGE-EYCTAAADLADAQAVCDK 64 +V +SGGVDS+V+ WLL+ +G+ +E ++K W ++G+ C +ADL A V Sbjct: 287 SRVACLVSGGVDSAVALWLLKSRGFDIEAFYLKVWSVENGDLGDCQWSADLEHAMGVTKL 346 Query: 65 LGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGADYI 124 L + LH V F Y V + F+A G TPNPD+ CN+ IKF AFL++A G +I Sbjct: 347 LNVPLHVVPFQDVYHQRVLDPFVAGASLGETPNPDVCCNEFIKFGAFLDYAVR-WGFSHI 405 Query: 125 ATGHYVRRAD--VDGKS----RLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQV 178 A+GHY + V G S RL D KDQ+YFL LS Q+ + +FP+ +L K +V Sbjct: 406 ASGHYASIIEDLVPGTSTRIARLRLCRDLRKDQTYFLSRLSQSQLRRVMFPLSQLYKNEV 465 Query: 179 RKIAEDLGLVTAKKKDSTGICFIGERKFREFLGRYLPAQPGKIITVD-GDEIGEHQGLMY 237 R IA LG +K+S G+CF+G+ + FL L PG I+ D G+ IG H GL + Sbjct: 466 RTIARTLGFSNYDRKESMGLCFLGKVDVKSFLSHRLGEVPGPIVDHDTGNCIGRHHGLFH 525 Query: 238 HTLGQRKGLG-IGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLHWVD 296 T+GQR+G+ + T + YVV KD++ N L V+ + G + ++ D Sbjct: 526 FTIGQREGIARYLNSVRDTNQSRYVVAKDIDTNTLYVSTRYHTKCYTEPGSVRRRFRISD 585 Query: 297 --------REPFTGTMRCTVKTRYRQTDIPCTVKALDDDR---IEVIFDEPVAAVTPGQS 345 + T ++K R+ T + D D V ++ + GQ Sbjct: 586 IRWNVPDFKRFITDPNSLSMKVRHSPTLCRGDISFDDLDTASGASVHLEKADIGLATGQY 645 Query: 346 AVFYNGEVCLGGGII 360 AV Y+G CLG G I Sbjct: 646 AVIYSGLNCLGAGKI 660 >UniRef50_D1PL47 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PL47_9FIRM Length = 348 Score = 199 bits (507), Expect = 1e-49, Method: Compositional matrix adjust. Identities = 131/362 (36%), Positives = 185/362 (51%), Gaps = 25/362 (6%) Query: 3 ETAKKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYCTAAADLADAQAVC 62 E KV++GMSGGVDSSV+ +LQ+QG+ V+G ++ DG ++ AQ Sbjct: 8 EKQYKVLMGMSGGVDSSVAVRILQEQGFAVQGAVIRFSPAHDGA--------VSAAQESA 59 Query: 63 DKLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGAD 122 L I LH ++ + +V F Y AG TPNP ILCN +KF+ E A +LG Sbjct: 60 KTLQIPLHIIDARDAFEQHVILPFCESYCAGMTPNPCILCNPLVKFRLLAE-KANELGCQ 118 Query: 123 YIATGHYVR-RADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQVRKI 181 +IATGHY R D G SR+ + +DQSY LY L E +++ + P+GE EK +R++ Sbjct: 119 FIATGHYARVEVDHKGVSRIAVPQSTARDQSYMLYRLPQEILSKLILPLGEFEKDDIREM 178 Query: 182 AEDLGLVTAKKKDSTGICFIGERKFREFL-GRYLPAQPGKIITVDGDEIGEHQGLMYHTL 240 A D+ L A DS ICFI + + ++ R + G+ I G+++G H G+ ++T+ Sbjct: 179 ARDIHLACADAPDSMEICFIPDGDYAAYIRSRGFSPKTGRFIGPQGEDLGPHAGVDHYTV 238 Query: 241 GQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLHWVDREPF 300 GQRKGLGI + P +V +I + G E+ S + L D +P Sbjct: 239 GQRKGLGIAAGR-----PLFVKAILENGDIQLAETGQEY----STHITLCDLTTPDGQPL 289 Query: 301 TGTMRCTVKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTPGQSAVFYNGEVCLGGGII 360 VK R PC L D V F +PV A PGQSAVFY + GGGII Sbjct: 290 PAG-DYLVKIRSAAKPSPC----LYDGAGAVRFPDPVRAPAPGQSAVFYRDGLVFGGGII 344 Query: 361 EQ 362 + Sbjct: 345 AE 346 >UniRef50_C5DEF9 KLTH0C08844p n=2 Tax=Saccharomycetaceae RepID=C5DEF9_LACTC Length = 426 Score = 199 bits (505), Expect = 2e-49, Method: Compositional matrix adjust. Identities = 128/385 (33%), Positives = 191/385 (49%), Gaps = 34/385 (8%) Query: 7 KVIVGMSGGVDSSVSAWLLQQQGY-QVEGLFMKNWEEDDGEEYCTAAADLADAQAVCDKL 65 +++ MS GVDSSV+A + G+ G++M+NW E E D D Q V L Sbjct: 35 NIVIAMSSGVDSSVAAAMFS--GFPNACGIYMQNWTETRSEREPCHERDWKDVQKVGAHL 92 Query: 66 GIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKF---KAFLEFAAEDLGAD 122 + + VNF +YW +VFE L +Y+ G TPNPDI CN+ IKF +A L+ A+ G Sbjct: 93 NLPVEKVNFEQDYWLDVFEPMLRDYEQGVTPNPDIGCNRFIKFGKLRAHLD-ASLGTGNY 151 Query: 123 YIATGHYVRRADVDGKS------RLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKP 176 ++ TGHY R + K+ LLR + KDQSY+L + + P+G L KP Sbjct: 152 WLVTGHYSRVLQTESKALGLNSWHLLRAFYAPKDQSYYLSQVPSAALPALCLPMGVLTKP 211 Query: 177 QVRKIAEDLGLVTAKKKDSTGICFIGER---KFREFLGRYLPAQPGKIITVDG-----DE 228 +VR++A DL L TA K DS GICF+ K FL +Y+P+ G+IIT+D E Sbjct: 212 EVREMAHDLRLPTAHKPDSQGICFVANSQHGKISRFLEQYIPSHAGEIITLDPITGERTE 271 Query: 229 IGEHQGLMYHTLGQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLI 288 G H GL +T+GQ+ G+ + + W+V DK V+ N +V+ +G ++P L ++ Sbjct: 272 WGRHTGLWNYTIGQKVGISMPQGDPRYQGAWFVADKRVDTNEIVICKGRDNPSLYKNRVV 331 Query: 289 AQ------QLHWVDREPFTGTMRCTVKTRYRQTDIPCTVKAL-------DDDRIEVIFDE 335 + L+ V + +YR P V + R+ + ++ Sbjct: 332 LKDFSPLGNLNDVQEAVKNNLAGGAIHIQYRSLQEPAKVSRCCWETTEAGESRLVMTLEQ 391 Query: 336 PVAAVTPGQSAVFYNGEVCLGGGII 360 A+ PGQ Y+ E LG G I Sbjct: 392 KQRAMAPGQYCTIYHKERILGSGTI 416 >UniRef50_B9L0K7 tRNA methyl transferase n=2 Tax=Thermomicrobia (class) RepID=B9L0K7_THERP Length = 370 Score = 199 bits (505), Expect = 2e-49, Method: Compositional matrix adjust. Identities = 129/371 (34%), Positives = 196/371 (52%), Gaps = 33/371 (8%) Query: 2 SETAKKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDG-EEYCTAAADLADAQA 60 + A++V+V +SGGVDS+V+A+LL+Q G++ G+ ++ ++ G + C ADA+A Sbjct: 6 TTMAERVLVALSGGVDSAVTAYLLKQAGWEPVGIHLRLFDAAPGLDGVCCGDVAAADARA 65 Query: 61 VCDKLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLG 120 V ++GI + E+ V + EY RTPNP + CN ++ A LE A E LG Sbjct: 66 VAAQIGIPFFVRDLRPEFEQEVVAPTVEEYARARTPNPCVFCNHRVRIPALLELA-EALG 124 Query: 121 ADYIATGHYVRRADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQVRK 180 ++ATGHYVR+ G RL D+ +DQSY LY L+ +Q+ + LFP+GE +KP VR Sbjct: 125 IRFVATGHYVRKVATPGGWRLAEARDAQRDQSYVLYRLTADQLERLLFPLGEYDKPTVRA 184 Query: 181 IAEDLGLVTAKKKDSTGICFIGERKFREFLGRYLP------AQPGKIITVDGDEIGEHQG 234 IA++ GL A+K S +CF K +GR + ++PG ++ + +G H G Sbjct: 185 IAQEAGLFVARKPSSVDLCFA---KTYGGIGRLVSQRRPETSRPGPLLDERDEVVGTHPG 241 Query: 235 LMYHTLGQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLHW 294 + + T+GQR+GL T E YV + D ++ VA R+++ + W Sbjct: 242 IAFVTIGQRRGLEWA---RPTPERRYVAEIDPATAVVRVAPRE---RILTRAVRLADPVW 295 Query: 295 VDREPFTGTMRCTVKTRYRQTDIPCTVKALDDDRIE---VIFDEPVAAVTPGQSAVFYNG 351 D + + RY+ IP RIE VIFDEP + PGQS V Y G Sbjct: 296 HD-----PVLTADARLRYQGPRIPA--------RIEGDWVIFDEPAPPLAPGQSVVLYVG 342 Query: 352 EVCLGGGIIEQ 362 + +GGGI E+ Sbjct: 343 DRVVGGGIAEE 353 >UniRef50_C9RAV2 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase n=1 Tax=Ammonifex degensii KC4 RepID=C9RAV2_AMMDK Length = 344 Score = 198 bits (504), Expect = 2e-49, Method: Compositional matrix adjust. Identities = 132/358 (36%), Positives = 194/358 (54%), Gaps = 27/358 (7%) Query: 7 KVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYCTAAADLADAQAVCDKLG 66 +V V +SGGVDS+ +A+LL Q GY+V G+ M E+ GE+ A V KL Sbjct: 3 RVAVALSGGVDSATAAFLLLQAGYEVFGVTMLVTGEE-GEK----------AAEVAAKLK 51 Query: 67 IELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGADYIAT 126 I + E+ V + F+ Y AG TPNP + CN+++KF LE A LGAD++AT Sbjct: 52 IPHFVFDLRQEFAQEVIKPFVEAYLAGLTPNPCVWCNRKLKFGLLLE-KALKLGADFLAT 110 Query: 127 GHYVRRADVDGKSRLL--RGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQVRKIAED 184 GHY R + R L RG D KDQSYFLY+L+ +Q+A+ LFP+G K + + + Sbjct: 111 GHYARVWFDPARERYLLARGKDRRKDQSYFLYSLNQQQLARVLFPLGGRTKAENLLLVKK 170 Query: 185 LGLVTAKKKDSTGICFIGERKFREFLGRYL--PAQPGKIITVDGDEIGEHQGLMYHTLGQ 242 LGL +++S +CF+ +RE + +PG I+ G +IG H+GL ++T+GQ Sbjct: 171 LGLPL--REESQDVCFLKGGDYRELIKAMAQEKVKPGPILDPQGKKIGTHRGLAFYTIGQ 228 Query: 243 RKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLHWVDREPFTG 302 R+GLG K P+YV+ D N L+V G E L + ++++ E G Sbjct: 229 RRGLGHAWGK-----PYYVLALDPRRNALIV--GPEE-MLYRPSCRVEGINFILFERPPG 280 Query: 303 TMRCTVKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTPGQSAVFYNGEVCLGGGII 360 V+ RY +P T+ + + + V F P AVTPGQ+AVFY ++ +GGG I Sbjct: 281 PFTAAVQVRYTSPAVPATLFP-EGEAVRVEFASPQRAVTPGQAAVFYQEDLVVGGGTI 337 >UniRef50_D2L5P8 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase n=1 Tax=Desulfovibrio sp. FW1012B RepID=D2L5P8_9DELT Length = 357 Score = 197 bits (500), Expect = 7e-49, Method: Compositional matrix adjust. Identities = 132/371 (35%), Positives = 184/371 (49%), Gaps = 29/371 (7%) Query: 7 KVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEED-DGEEYCTAAADLADAQAVCDKL 65 ++ V +SGG DS +S LL+ +G+ V + D G+E A + C +L Sbjct: 2 RLAVAVSGGADSLLSLGLLRAEGHDVVAVHAHFLPPDMKGQELARAI------ETQCGRL 55 Query: 66 GIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGADYIA 125 G+ V+ + E+ V F+A Y AG+TPNP CN+++KF +E AA +LGAD +A Sbjct: 56 GVPFAAVDLSREFGRQVVAPFIAAYAAGQTPNPCAACNRDMKFGLLME-AARELGADKLA 114 Query: 126 TGHYVRRADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQVRKIAEDL 185 TGH+ R + D L RG D ++DQSYFL + + +A+++FP+ K L Sbjct: 115 TGHFARLQETDRGPALFRGADDSRDQSYFLSLVPRDALARAVFPLARRRKADHPAALAAL 174 Query: 186 GLVTAKKKDSTGICFIGERKFREFL---GRYLPAQPGKIITVDGDEIGEHQGLMYHTLGQ 242 GL K+S +CF+ +R FL G L PG I+ DG +G HQGL HT+GQ Sbjct: 175 GLAPPLPKESREVCFVPGDDYRAFLEASGAAL-TGPGPIVLTDGTRLGTHQGLWRHTIGQ 233 Query: 243 RKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHE----HPRLMSVGLIAQQLHWVDRE 298 RKGLGI +P YV+ KD N LVV + R L+A W Sbjct: 234 RKGLGI-----AYADPLYVLGKDTAANTLVVGVRADLDATACRTGPANLLADPAGW---- 284 Query: 299 PFTGTMRCTVKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTPGQSAVFYN--GEVCLG 356 P T T+ +T YR P D + + FD PVA TPGQ A Y+ G V G Sbjct: 285 PATATV--LAQTCYRMRPRPARAVLGPDGGLALTFDAPVARPTPGQVATVYDAAGRVLAG 342 Query: 357 GGIIEQRLPLP 367 G ++ LP P Sbjct: 343 GVLVPDTLPSP 353 >UniRef50_B7G4M7 Predicted protein (Fragment) n=1 Tax=Phaeodactylum tricornutum CCAP 1055/1 RepID=B7G4M7_PHATR Length = 394 Score = 196 bits (497), Expect = 1e-48, Method: Compositional matrix adjust. Identities = 131/384 (34%), Positives = 194/384 (50%), Gaps = 47/384 (12%) Query: 7 KVIVGMSGGVDSSVSAWLLQQQ----------GYQVEGLFMKNW----EEDDGEEYCTAA 52 +V++ +SGGVDS+V+A LLQ+ ++ + M NW ++DD CT+ Sbjct: 1 RVVLALSGGVDSAVAAALLQETYGSSNNSDIGSAVLQTVHMSNWNSNTQDDDSIASCTSE 60 Query: 53 ADLADAQAVCDKLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFL 112 D DA AV + L + L +F EYW+ VFE ++ + G NPDI CN +KF A Sbjct: 61 QDWKDATAVAEHLRLNLTRQHFEREYWNQVFEPYVNDILRGTMGNPDIGCNVHVKFGALR 120 Query: 113 EFAAEDL--GADYIATGHYVRRAD--VDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLF 168 EFA L G D + HY LL D +KDQSYFL + Q++ LF Sbjct: 121 EFADWVLRWGWDQPPSPHYSHHNHQYQTPPPLLLAAADPSKDQSYFLSACAGYQLSNVLF 180 Query: 169 PVGELE---------KPQVRKIAEDLGLVTAKKKDSTGICFIGERK--FREFLGRYLPA- 216 P+GE KP VR++A+D L A K++S GICF+G+R+ F +FL YLP Sbjct: 181 PLGEYYKKENPSNDGKPTVRQLAKDYNLPNANKRESMGICFVGKRQSGFGDFLHEYLPHP 240 Query: 217 -QPGKIITVDGDEI-----GEHQGLMYHTLGQRKGLGIGGTKEGTEEPWYVVDKDVENNI 270 +P + + VD + ++ + +T+GQ G G E ++VVD DV N Sbjct: 241 LRPLQFVDVDTGAVLPAPTPKNAHAVLYTIGQ------GAKISGASEKYFVVDSDVAQNR 294 Query: 271 LVVAQGHEHPRLMSVGLIAQQLHWVDRE---PFT--GTMRCTVKTRYRQTDIPCTVKALD 325 ++V G HP L + L+ + ++W E P G +R + R+ Q I C ++ Sbjct: 295 VLVCAGTHHPALYADSLVLETVYWTAGEMPGPLQKRGRLRLQCRIRHLQPLIDCELRVEL 354 Query: 326 DDRIEVIFDEPVAAVTPGQSAVFY 349 D + V FD+ V +TPGQ+A FY Sbjct: 355 DGSLTVYFDKAVRGITPGQTAAFY 378 >UniRef50_Q5LIS5 tRNA-specific 2-thiouridylase mnmA 1 n=5 Tax=Bacteroides RepID=MNMA1_BACFN Length = 364 Score = 196 bits (497), Expect = 2e-48, Method: Compositional matrix adjust. Identities = 126/374 (33%), Positives = 196/374 (52%), Gaps = 30/374 (8%) Query: 1 MSETAKKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYCTAAADLADAQA 60 M E K+V++GMSGG DSSV+A LL + GY+V G+ + +E + EY L DA+A Sbjct: 1 MMEKNKRVLLGMSGGTDSSVAAMLLLEAGYEVTGVTFRFYEFNGSTEY------LEDARA 54 Query: 61 VCDKLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLG 120 + +LGI T + + + + + F+ EY +G TP P LCN ++K+ L A+++G Sbjct: 55 LAARLGIGHITYDARKVFQEQIIDYFIDEYMSGHTPVPCTLCNNQLKW-PLLAKIADEMG 113 Query: 121 ADYIATGHYVRRADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQVRK 180 Y+ATGHYVR+ +DG + D +KDQS+FL+ L E + + L P+G + K + R Sbjct: 114 IFYLATGHYVRKQWIDGNYYIAPAEDVDKDQSFFLWGLRQEILQRMLLPMGGMTKSEARA 173 Query: 181 IAEDLGL-VTAKKKDSTGICFIGERKFREFLGR-------------YLPAQPGKIITVDG 226 A G +KKKDS G+CF +R FL + Y + G+ + G Sbjct: 174 YAAGRGFEKVSKKKDSIGVCFC-PLDYRSFLKKCLCDESGDKNRNIYRKVERGRFLDESG 232 Query: 227 DEIGEHQGLMYHTLGQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVG 286 + I H+G ++T+GQR+GLGI + +V + E N +V+A L Sbjct: 233 NFIAWHEGYPFYTIGQRRGLGIQLNR-----AVFVKEIHPETNEVVLAS---LKSLEKSE 284 Query: 287 LIAQQLHWVDREPFTGTMRCTVKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTPGQSA 346 + + + VD G VK RYR+ + C+V + + + EP++A+ GQ+A Sbjct: 285 MWLKDWNIVDESRLLGCDDVIVKIRYRKQENHCSVTITPEGLLHIRLHEPLSAIAEGQAA 344 Query: 347 VFYNGEVCLGGGII 360 FY + LGGGII Sbjct: 345 AFYKDGLLLGGGII 358 >UniRef50_Q1AWB1 tRNA-specific 2-thiouridylase mnmA n=1 Tax=Rubrobacter xylanophilus DSM 9941 RepID=MNMA_RUBXD Length = 488 Score = 194 bits (494), Expect = 3e-48, Method: Compositional matrix adjust. Identities = 127/360 (35%), Positives = 193/360 (53%), Gaps = 19/360 (5%) Query: 6 KKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYCTAAADLADAQAVCDKL 65 + V+ MSGGVDS+V+A LL+++GY+V + + + + G C + + A+ L Sbjct: 144 RGVVAAMSGGVDSAVTALLLKERGYEVVAVTFRLHDGEPGSRSCCSPDTVLFARETAHGL 203 Query: 66 GIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGADYIA 125 GI T+N + V F+ Y AGRTPNP + CN +KF A F A+ LG ++A Sbjct: 204 GIPHFTLNLRELFDRRVMRDFVGSYAAGRTPNPCVACNAHVKFHA-AAFLADRLGLRHVA 262 Query: 126 TGHYVRRADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQVRKIAEDL 185 TGHY R V L R D KDQ+Y L+ + + +++FP+G+ K +VR+IAE+ Sbjct: 263 TGHYAR---VGEGPCLERPEDGRKDQTYVLWPVPPRLLGRTIFPLGDYRKSEVRRIAEER 319 Query: 186 GLVTAKKKDSTGICFIGERKFREFLGRYLPAQPGKIITVDGDEIGEHQGLMYHTLGQRKG 245 GL A+ +S ICFI + +R F+ R + ++PG+I+ G +G H G++ T+GQR+G Sbjct: 320 GLAVARTPESQDICFIPDGDYRSFVRRRVRSEPGEIVDRQGRVLGRHAGVVDFTVGQRRG 379 Query: 246 LGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLHWVDREPFTGTMR 305 LGI P YV + + +VV E L ++ + +W +P + Sbjct: 380 LGI-----SAPTPLYVTEVRPRSRQVVVGSRRE---LEVRRMLVRGANWF-LDPREAAL- 429 Query: 306 CTVKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTPGQSAVFY--NGEVCLGGGIIEQR 363 V+ RY +PC ++ EV EPV V PGQSAVFY +G +GGGII +R Sbjct: 430 --VQVRYNGEPVPCELEE-GAGGWEVALLEPVFGVAPGQSAVFYTRDGAKVVGGGIIARR 486 >UniRef50_B1VFZ9 tRNA-specific 2-thiouridylase mnmA n=65 Tax=Bacteria RepID=MNMA_CORU7 Length = 406 Score = 194 bits (493), Expect = 4e-48, Method: Compositional matrix adjust. Identities = 132/386 (34%), Positives = 200/386 (51%), Gaps = 36/386 (9%) Query: 7 KVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDD----GEEYCTAAADLADAQAVC 62 +V+ MSGGVDS+V+A + G++V G+ + + + G C + D ADA+ V Sbjct: 2 RVVAAMSGGVDSAVAAARALEAGHEVIGVHLALSQSPEAVRAGSRGCCSLEDSADARRVA 61 Query: 63 DKLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGAD 122 DKLGI + +F+ + +V + F+ Y G TPNP + CN++IKF+A L+ + LG D Sbjct: 62 DKLGIPFYVWDFSDRFKADVIDNFVDSYAIGETPNPCLRCNEKIKFEALLDRSIA-LGFD 120 Query: 123 YIATGHYVRRADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQVRKIA 182 + TGHY + D L RG+D++KDQSY L L+ EQ+A +FPVG+ KP++R+ A Sbjct: 121 AVVTGHYAQLHD----GVLRRGVDADKDQSYVLGVLTDEQLAHCMFPVGDTVKPEIREEA 176 Query: 183 EDLGLVTAKKKDSTGICFIGERKFREFLGRYLPAQPGKIITVDGDEIGEHQGLMYHTLGQ 242 D G A K DS ICFI + + + FLG + +PG + G+ + EH G+ T+GQ Sbjct: 177 ADAGFGVANKPDSHDICFIPDGRTQAFLGSKIGLRPGLVRDTGGETVAEHDGVYGFTVGQ 236 Query: 243 RKGLGIGGTKEGTE-EPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLHWVDREPFT 301 RKGLG+ +E + P YV D D + V + L G+IA +L +D E Sbjct: 237 RKGLGL--PRETLDGRPRYVTDIDAHTGTVTVGTRED---LRVGGIIADRLKRLDPEVHG 291 Query: 302 GTMRCTVKTRYRQTDIPCTVKALDDD-------RIEVIFDEP----------VAAVTPGQ 344 C V+ R +P + +DD R++ + P + V GQ Sbjct: 292 REFDCEVQVRAHGGVVPARARLVDDPTPVTPAGRVKEADELPWRLELELLQPLEGVARGQ 351 Query: 345 SAVFY----NGEVCLGGGIIEQRLPL 366 +AV Y +G++ LG G I L Sbjct: 352 AAVVYRPDEDGDILLGSGTIRATTAL 377 >UniRef50_Q8R5Z5 tRNA-specific 2-thiouridylase mnmA 2 n=12 Tax=Fusobacterium RepID=MNMA2_FUSNN Length = 343 Score = 193 bits (491), Expect = 7e-48, Method: Compositional matrix adjust. Identities = 129/361 (35%), Positives = 204/361 (56%), Gaps = 24/361 (6%) Query: 6 KKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYCTAAADLADAQAVCDKL 65 KKV++GMSGGVDSSVSA+LL++QGY+V G+ + E++ + D+ D + VCDKL Sbjct: 2 KKVVIGMSGGVDSSVSAYLLKEQGYEVIGITLNQHLEEN-------SKDIEDTKKVCDKL 54 Query: 66 GIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGADYIA 125 GI VN ++ + V + FL Y +G+TP+P I+C+ EIKFK + A+ A+Y+A Sbjct: 55 GIIHEVVNIRKDFENIVIKYFLEGYNSGKTPSPCIICDDEIKFKILFDI-ADKYNAEYVA 113 Query: 126 TGHY--VRRADVDGKSRLLRGLDS-NKDQSYFLYTLSHEQIAQSLFPVGELEKPQVRKIA 182 TGHY V ++V K LL+ + S KDQSY LY LS +++ + +FP+ + K ++R+IA Sbjct: 114 TGHYTSVEYSEVFSK-YLLKSVHSIIKDQSYMLYRLSPDKLERLIFPLKDYSKQEIREIA 172 Query: 183 EDLGLVTAKKKDSTGICFIGERKFREFLGRYLPAQ--PGKIITVDGDEIGEHQGLMYHTL 240 + L KKDS G+CF E ++EFL L + G I +G+ +G+H+G +T+ Sbjct: 173 LKIDLEVHDKKDSQGVCFAKE-GYKEFLKENLRDEIVRGNFIDKNGNILGQHEGYQLYTI 231 Query: 241 GQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLHWVDREPF 300 GQR+GLGI +K P ++ + + N +V+ + E + V LI + V+ E Sbjct: 232 GQRRGLGINLSK-----PVFITEIKAQTNDIVLGEFSE-LFIDKVELINSKFS-VEYEKL 284 Query: 301 TGTMRCTVKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTPGQSAVFYNGEVCLGGGII 360 + + R+ T + D ++I ++E A GQ VF+ +GGG I Sbjct: 285 E-NLELLARPRFSSTGFYGKL-IKDKNKIYFKYNEENAHNAKGQHIVFFYDGFVVGGGEI 342 Query: 361 E 361 + Sbjct: 343 K 343 >UniRef50_A5FZD5 tRNA-specific 2-thiouridylase mnmA n=2 Tax=Proteobacteria RepID=MNMA_ACICJ Length = 345 Score = 191 bits (485), Expect = 4e-47, Method: Compositional matrix adjust. Identities = 127/361 (35%), Positives = 189/361 (52%), Gaps = 25/361 (6%) Query: 7 KVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDG---EEYCTAAADLADAQAVCD 63 +V+V MSGGVDSSV A L+ + G++V G+ ++ ++ + C A D+ DA+ V D Sbjct: 2 RVVVAMSGGVDSSVVAGLMHEAGHEVIGVTLQLYDHGAATGRKGACCAGQDIHDARNVAD 61 Query: 64 KLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGADY 123 +LGI + ++ A + V F Y GRTP P + CN+ +KF L A DLGA+ Sbjct: 62 RLGIAHYVIDAEAAFRAAVIGDFAESYAEGRTPVPCVRCNQHLKFGDLLGLA-RDLGAEA 120 Query: 124 IATGHYVRRADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGEL-EKPQVRKIA 182 +ATGHYVRR D + L R +D+ +DQS+FL+ + +Q+A S FP+G + +K VR A Sbjct: 121 LATGHYVRREDGPEGAELHRAVDARRDQSWFLFATTRDQLAFSRFPLGTMPDKDAVRAEA 180 Query: 183 EDLGLVTAKKKDSTGICFIGERKFREFLGRYLP--AQPGKIITVDGDEIGEHQGLMYHTL 240 + L A+K DS ICF+ + + + + P A PG+I+T DG + HQG+ +T+ Sbjct: 181 ARMNLPVAEKPDSQDICFVPSGTYADIVAKLRPDAAAPGEIVTEDGAVLDRHQGIARYTV 240 Query: 241 GQRKGLGIGGTKEGTEEPWYVVDK-DVENNILVVAQGHEHPRLMSVGLIAQQLHWVDREP 299 GQ K LG +VV + D +VV R + + + +W+ +P Sbjct: 241 GQAKRLGAAS--------GHVVTRIDAARRRIVVGPRGAGGREVRIA----EPNWLI-DP 287 Query: 300 FTGTMRCTVKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTPGQSAVFYNGEVCLGGGI 359 R +VK R +T P + D R V D P A PGQ+ V Y LGGG Sbjct: 288 PAAPFRASVKLRAGETPHPAEI---DIARNLVTLDTP-ALAAPGQACVVYRESRVLGGGF 343 Query: 360 I 360 I Sbjct: 344 I 344 >UniRef50_A6NQI9 Putative uncharacterized protein n=1 Tax=Bacteroides capillosus ATCC 29799 RepID=A6NQI9_9BACE Length = 342 Score = 190 bits (483), Expect = 6e-47, Method: Compositional matrix adjust. Identities = 126/356 (35%), Positives = 191/356 (53%), Gaps = 27/356 (7%) Query: 9 IVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYCTAAADLADAQAVCDKLGIE 68 ++G+SGGVDS+V+A LL + Y+V GL++ G+ ADA AV +L I Sbjct: 1 MLGLSGGVDSAVAAQLLSRD-YEVHGLYLDIGLGGTGQ---------ADAAAVAHRLDIP 50 Query: 69 LHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGADYIATGH 128 HT + E + V F A+Y AGRTP P CN +KF A L A E++GA+ +ATGH Sbjct: 51 FHTADIRQELENQVCGPFAADYLAGRTPLPCARCNPTVKFPALLALA-EEIGAEKVATGH 109 Query: 129 YVRRA-DVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQVRKIAEDLGL 187 Y R A DG+ L +GL +N DQSY L L + + +FP+G+ EK VR +A L Sbjct: 110 YARTALAPDGRVLLRKGLPAN-DQSYMLSRLPQNILQKVIFPLGDYEKTAVRAMAGQAEL 168 Query: 188 VTAKKKDSTGICFIGERKFREFL---GRYLPAQPGKIITVDGDEIGEHQGLMYHTLGQRK 244 A K DS ICFI + + +L G PA G + DG +G H G+ +TLGQ + Sbjct: 169 PVADKPDSMEICFIPDGDYAAWLEHRGTVPPA--GDFVDRDGRVLGRHGGIHRYTLGQGR 226 Query: 245 GLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLHWVDREPFTGTM 304 GLG+ G + +YV + D ++ +V++ G + LM+ + ++W+ + + Sbjct: 227 GLGVSGPHK-----YYVTEIDPAHDRVVLSDGSD---LMARRVYCADMNWLSVDGLPEPL 278 Query: 305 RCTVKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTPGQSAVFYNGEVCLGGGII 360 TV+ R+ +T++ +A D + + + +P A TPGQ AV Y G++ G I Sbjct: 279 EVTVRLRHSKTELAAVARA-DGENVVLEMLDPARAPTPGQLAVLYQGDIVAASGWI 333 >UniRef50_UPI0001C3185B tRNA(5-methylaminomethyl-2-thiouridylate)-methyl transferase n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C3185B Length = 519 Score = 190 bits (483), Expect = 7e-47, Method: Compositional matrix adjust. Identities = 132/385 (34%), Positives = 195/385 (50%), Gaps = 46/385 (11%) Query: 7 KVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNW--EEDDGEEYCTAAADLADAQAVCDK 64 + +V MSGGVDS+V+A L ++ V + ++ W E++DGE C +A + A+A+ + Sbjct: 144 RTLVAMSGGVDSAVAALLAARESGDVVAVTLELWADEQNDGERSCCSAQAVRFARALAHR 203 Query: 65 LGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGADYI 124 +G+ T++ E+ V FL ++ AG TPNP + CN ++ A LE A + LGA + Sbjct: 204 MGLPHLTLDLREEFSAGVVTPFLDDHAAGLTPNPCVRCNGHVRLDAMLELA-DRLGAATL 262 Query: 125 ATGHYVRRADVD----------------GKSRLLRGL-DSNKDQSYFLYTLSHEQIAQSL 167 ATGHY R + LLR D+ KDQ+Y L L+ +A+ Sbjct: 263 ATGHYARVEPAEPVEPAAAPAEHAAAPAEHGPLLRAAADAWKDQTYMLAALAPASLARLR 322 Query: 168 FPVGELEKPQVRKIAEDLGLVTAKKKDSTGICFIGERKFREFLGRY--LPAQPGKIITVD 225 FP+G+L KPQVR +A + L A K +S +CF+ EFL R+ + +PG+++ Sbjct: 323 FPLGDLTKPQVRALAAEAELPVASKAESQDLCFLAGTSRSEFLARHAGIAQRPGEVVDAA 382 Query: 226 GDEIGEHQGLMYHTLGQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSV 285 GD IG H G T+GQR+GLG+ EEP YV+ D +N VVA SV Sbjct: 383 GDVIGAHTGHHGFTVGQRRGLGV-----AAEEPLYVLRTDPASN-RVVAGTRAQLATTSV 436 Query: 286 GLIAQQLH----WVDREPFTGTMRCTVKTRYRQTDIPCTV----KALDDDRIEVIFDEPV 337 + +LH VDR VK RYR +P V A R+E+ +EPV Sbjct: 437 PVRGARLHRDGARVDR----------VKLRYRAKPLPARVVGAPAAGTHRRLEIALEEPV 486 Query: 338 AAVTPGQSAVFYNGEVCLGGGIIEQ 362 PGQ A +G+V +G I++ Sbjct: 487 DGAAPGQLACLMDGDVVIGWATIDR 511 >UniRef50_Q4UE41 Trna methyl transferase, putative n=2 Tax=Theileria RepID=Q4UE41_THEAN Length = 1070 Score = 189 bits (481), Expect = 1e-46, Method: Compositional matrix adjust. Identities = 111/320 (34%), Positives = 170/320 (53%), Gaps = 31/320 (9%) Query: 4 TAKKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYCTAAADLADAQAVCD 63 + K+V V +SGGVDSS++ W+++ +G+ V+ +K + +G C ++ D++ A VC+ Sbjct: 295 SKKRVAVLVSGGVDSSLALWIMKSRGFDVQAFHLKVNDLSNGPGLC-SSNDISYAMEVCN 353 Query: 64 KLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGADY 123 L + LH + F+ Y ++ L +Y+ G PNPDILCN IKF FL+ A D G DY Sbjct: 354 ILRVTLHVLPFSQVYDKHILSDVLDDYRKGEVPNPDILCNSRIKFGEFLKMAT-DWGFDY 412 Query: 124 IATGHYVRRAD-------------VDGKS---------RLLRGLDSNKDQSYFLYTLSHE 161 +ATGHY D +DG + RL D+ KDQ+YFL L+ Sbjct: 413 VATGHYATLCDDFFTKEQIKSPSYLDGCTSINGYYRIKRLCLSTDTVKDQTYFLSRLNQN 472 Query: 162 QIAQSLFPVGELEKPQVRKIAEDLGLVTAKKKDSTGICFIGERKFREFLGRYLPAQPGKI 221 Q+++ +FP+G + K QVR A+ +GL T KKDS G+CF+ + E+L + L G I Sbjct: 473 QMSRLIFPIGNILKTQVRDFAKTVGLPTYNKKDSFGLCFLEDLDLSEYLTKTLGESRGPI 532 Query: 222 ITVDGDE-IGEHQGLMYHTLGQRKGL-GIGGTKEGTEEPWYVVDKDVENNILVVAQGHE- 278 + + ++ IGEH GL T+GQ+K + K P YVV KD+ N L V+ + Sbjct: 533 VEYETNKVIGEHNGLYNFTIGQKKTINNYLNPKHVGNTPKYVVKKDIYKNTLYVSASYNE 592 Query: 279 ----HPRLMSVGLIAQQLHW 294 +PR + + W Sbjct: 593 DFFTNPRGIRSSFKVRDFFW 612 >UniRef50_D1BVV4 tRNA(5-methylaminomethyl-2-thiouridylate)-methyl transferase n=2 Tax=Actinomycetales RepID=D1BVV4_XYLCX Length = 400 Score = 189 bits (480), Expect = 1e-46, Method: Compositional matrix adjust. Identities = 132/386 (34%), Positives = 191/386 (49%), Gaps = 36/386 (9%) Query: 7 KVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDD----GEEYCTAAADLADAQAVC 62 +V+ MSGGVDS+V+A L + G+ V G+ M D G C + D +DA+ Sbjct: 2 RVLAAMSGGVDSAVAAALAVEAGHDVVGVHMALSRNRDQFRTGSRGCCSIEDASDARRAA 61 Query: 63 DKLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGAD 122 D LGI + + + + D V FLAEY+AGRTPNP + CN+ IKF+ LE A LG D Sbjct: 62 DVLGIPYYVWDLSERFEDTVVADFLAEYEAGRTPNPCVRCNEHIKFETLLEKATA-LGFD 120 Query: 123 YIATGHYVRRAD-VDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGEL-EKPQVRK 180 +ATGHY R + DG L R ++ KDQSY L + E++A+++FP+G K +VR Sbjct: 121 AVATGHYARVVERPDGTRELHRSPNTEKDQSYVLAVMGPERLARAIFPLGGFASKAEVRA 180 Query: 181 IAEDLGLVTAKKKDSTGICFIGERKFREFLGRYLPAQPGKIITVDGDEIGEHQGLMYHTL 240 A GL + K DS ICF+ + R FL L ++PG+++ G +GEH G +T+ Sbjct: 181 EAARRGLAVSAKPDSYDICFVADGDTRGFLRDRLGSRPGEVVDTSGAVVGEHDGAYAYTV 240 Query: 241 GQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIA--QQLHWVDRE 298 GQRKGL + G +P YV+D N +VV L++V IA + + + D Sbjct: 241 GQRKGLAL-GRPAADGKPRYVLDVRTSTNQVVVGPAE----LLTVDRIAGDRAVWFTDPA 295 Query: 299 PFTGTMR---------------------CTVKTRYRQTDIPCTVKALDDDRIEV-IFDEP 336 P R ++ R T +P + D +EV + P Sbjct: 296 PGPRASRDVGLPTPDTDVPGRPSSPVDDVEIQVRAHGTPVPARILDAADGGVEVELTGTP 355 Query: 337 VAAVTPGQSAVFYNGEVCLGGGIIEQ 362 + V GQS V Y G LG + + Sbjct: 356 LRGVAAGQSLVVYRGTQVLGQATVTR 381 >UniRef50_B7AL92 Putative uncharacterized protein n=3 Tax=Bacteroides RepID=B7AL92_9BACE Length = 357 Score = 189 bits (479), Expect = 2e-46, Method: Compositional matrix adjust. Identities = 122/355 (34%), Positives = 191/355 (53%), Gaps = 21/355 (5%) Query: 3 ETAKKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYCTAAADLADAQAVC 62 ++ ++V++GMSGG DSSV+A L GY+V G+ + +E D EY L DA+A+ Sbjct: 9 KSKERVLLGMSGGTDSSVAAMRLLDAGYEVTGVTFRFYEVDGRTEY------LDDARALA 62 Query: 63 DKLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGAD 122 +LGIE T + + + + F+ EY AG TP P LCN E+K+ A L A++ G Sbjct: 63 ARLGIEHVTYDAQELFRERIIRYFIDEYLAGHTPVPCTLCNNELKW-ALLARIADEKGIY 121 Query: 123 YIATGHYVRRADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQVRKIA 182 +I+TGHY R+A + + + D +KDQ++FL+ L + + + L P+G++ K + R A Sbjct: 122 WISTGHYARKALLGEQCYIAPASDRDKDQTFFLWGLKQDILQRMLLPMGDVTKEEARAYA 181 Query: 183 EDLGLV-TAKKKDSTGICFIGERKFREFLGRYLPAQ--PGK--IITVDGDEIGEHQGLMY 237 G A KKDS G+CF +R FL R +PA+ PGK I G+ +G H+G + Sbjct: 182 AGRGFARVASKKDSIGVCFC-PLDYRSFLKREVPAERLPGKGLFIGEKGEILGRHEGYPF 240 Query: 238 HTLGQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLHWVDR 297 +T+GQR+GLGI + +V + N +V+A L ++ + + V Sbjct: 241 YTIGQRRGLGIHLNR-----AVFVKEVRTATNEVVLA---PLASLYKDEMLLKDWNLVSE 292 Query: 298 EPFTGTMRCTVKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTPGQSAVFYNGE 352 + G VK RYR+ C V + D + V EP+ A+ PGQ+A FY+ + Sbjct: 293 QRVLGMETVIVKIRYRKQANRCRVALMADGCLRVSLLEPLEAIAPGQAAAFYDAD 347 >UniRef50_C6BSG5 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase n=2 Tax=Desulfovibrio RepID=C6BSG5_DESAD Length = 360 Score = 189 bits (479), Expect = 2e-46, Method: Compositional matrix adjust. Identities = 135/368 (36%), Positives = 193/368 (52%), Gaps = 31/368 (8%) Query: 4 TAKKVIVGMSGGVDSSVSAWLLQQQG---YQVEGLFMKNWEEDDGEEYCTAAADLADAQA 60 +KV + +SGG DS +S LL++ G V G F+ G+E A +A + Sbjct: 15 AGRKVAMAVSGGADSLLSMVLLKESGADIVAVHGCFL-------GKEKAEVA--VAGLEK 65 Query: 61 VCDKLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLG 120 C +L + LH + AE+ V E F+ EY G TPNP LCN EIKF + AA++LG Sbjct: 66 RCAELDVSLHVFDLTAEFDRLVVEPFVQEYLRGNTPNPCALCNPEIKFGVLYK-AAQELG 124 Query: 121 ADYIATGHYVRRADVDGKSRLL-RGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQVR 179 D + TGHYVR A+ R+L RG D KDQSYFL + + + ++FP+G K Q Sbjct: 125 CDLLGTGHYVRIAEDARYGRVLARGADMGKDQSYFLSLVPRDSVLNAIFPLGGHSKDQTY 184 Query: 180 KIAEDLGLVTAKKKDSTGICFIGERKFREFL---GRYLPAQPGKIITVDGDEIGEHQGLM 236 + G+ +S ICF+ + +R+FL LP PG + DG ++G+H GL Sbjct: 185 AELDKRGVEIPLPSESQEICFVPDDDYRQFLIDRKVKLPG-PGIAVLSDGTKVGKHNGLW 243 Query: 237 YHTLGQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLHW-V 295 +T GQR+GLGI + P YV+DKD++ N+L+V E L + G IA ++ + Sbjct: 244 RYTQGQRRGLGI-----SWKAPLYVLDKDMKRNLLIVGTSDE---LEAGGCIADSFNFLI 295 Query: 296 DREPFTGTMRCTVKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTPGQSAVFYNGE-VC 354 D E + T+ ++TRYRQ P + I+ F EP + TPGQ Y E Sbjct: 296 DFERWPETV--YIQTRYRQRSKPARAVQVGSS-IKFDFIEPHSRPTPGQIVAVYTEEGAV 352 Query: 355 LGGGIIEQ 362 LGGGII + Sbjct: 353 LGGGIIRE 360 >UniRef50_C7GYK6 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase n=1 Tax=Eubacterium saphenum ATCC 49989 RepID=C7GYK6_9FIRM Length = 348 Score = 189 bits (479), Expect = 2e-46, Method: Compositional matrix adjust. Identities = 115/359 (32%), Positives = 184/359 (51%), Gaps = 26/359 (7%) Query: 7 KVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYCTAAADLADAQAVCDKLG 66 KV VG SGGVDS+ + LL+++GY V ++++ E A D+++ + + + +G Sbjct: 9 KVAVGFSGGVDSTAACLLLKEKGYDVHPVYLRMGE----------AEDISELKKIANDIG 58 Query: 67 IELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGADYIAT 126 +EL ++ + ++V + F Y G TPNP I+CN +KF+ ++F A+D G D IAT Sbjct: 59 LELKVLDLTDRFNNSVVDNFKKAYMNGMTPNPCIVCNPLVKFRGLMDF-ADDNGIDLIAT 117 Query: 127 GHYVRRADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGEL-EKPQVRKIAEDL 185 GHY R L RG ++ KDQSY LY L + + P+GE K +R I Sbjct: 118 GHYARIVKNGDNPVLCRGRNAQKDQSYMLYGLDSNVFERLILPLGEYGNKEDIRNILRTN 177 Query: 186 GLVTAKKKDSTGICFIGERKFREFLGRYLPAQPGKIITVDGDEIGEHQGLMYHTLGQRKG 245 ++ ++K DS ICF+ K E ++ P + G+ + +G+ +G H+G+ T+GQRKG Sbjct: 178 EIINSEKPDSQEICFL---KQDESYKKFFPEREGEFVDAEGNILGRHRGIHNFTVGQRKG 234 Query: 246 LGIGGTKEGTEEPWYVVDKDVENNILVVAQGH----EHPRLMSVGLIAQQLHWVDREPFT 301 LGI +K P YV+ N +++ E + + + + + Sbjct: 235 LGITFSK-----PMYVLGIAASTNRVMLGSEEELYKERATITDMKYLGNDISKCTDDAHK 289 Query: 302 GTMRCTVKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTPGQSAVFYNGEVCLGGGII 360 G R K RY + L +E++F+EPV A+ PGQS V Y +V + GGII Sbjct: 290 GLYR--AKVRYSSAEYEIKEINLKGSDLEIVFNEPVRAIAPGQSLVVYCRDVVILGGII 346 >UniRef50_Q7U320 tRNA-specific 2-thiouridylase mnmA n=3 Tax=Helicobacteraceae RepID=MNMA_HELHP Length = 345 Score = 189 bits (479), Expect = 2e-46, Method: Compositional matrix adjust. Identities = 131/363 (36%), Positives = 201/363 (55%), Gaps = 28/363 (7%) Query: 7 KVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYCTAAADLADAQAVCDKLG 66 KV + MSGGVDSS A LL QGY+V G+++K +++ + +A+ + V L Sbjct: 2 KVALLMSGGVDSSYCAHLLSSQGYEVIGIYLKLHDKNKKHDIY-----IANCEQVAAHLH 56 Query: 67 IELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGADYIAT 126 I+ ++ E+ +V++ F++ YK G+TPNP +CN +KF L+ A E LG DYIAT Sbjct: 57 IDFQVLDLREEFKKSVYDTFVSSYKEGKTPNPCAICNPLMKFGLGLQKALE-LGCDYIAT 115 Query: 127 GHYVRRADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQVRKIAEDL- 185 GHY + +V+G R+ + +D +KDQSYFLY L E I + +FP+G L K ++K A +L Sbjct: 116 GHYAQIKEVNGIKRIAKAVDESKDQSYFLYALPQEAIDRIIFPLGALLKEDIKKTALELL 175 Query: 186 -GLVTAKK-KDSTGICFIGERKFREFLGRYLPA-QPGKIITVDGDEIGEHQGLMYHTLGQ 242 L T + K+S ICF+ E+ + + L + G + +G IG H+G M++T+G+ Sbjct: 176 PFLGTLQTYKESQEICFV-EQSYIDILKLHDKVDNEGVVRNSNGKAIGTHKGYMHYTIGK 234 Query: 243 RKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLHWVDREPFTG 302 RKG + G+ EP YV + +NN +VV E +++ I + L+ + F G Sbjct: 235 RKGFSVF----GSHEPHYVKAINPQNNEIVVGTKEE----LAIDSI-KALNKSLPQAFNG 285 Query: 303 TMRCTVKTRYRQTDIPCTVKALDDDRIEVIFD---EPVAAVTPGQSAVFYNGEVCLGGGI 359 + VK RYR T + KA D + E I+ E V GQ+ V Y + LGGG+ Sbjct: 286 GIY-DVKVRYRSTPL----KAQIDIQGEFIYAKLLESAYGVAQGQALVLYQEDCVLGGGV 340 Query: 360 IEQ 362 I Q Sbjct: 341 ITQ 343 >UniRef50_C9L0F1 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase n=1 Tax=Bacteroides finegoldii DSM 17565 RepID=C9L0F1_9BACE Length = 365 Score = 188 bits (477), Expect = 3e-46, Method: Compositional matrix adjust. Identities = 126/377 (33%), Positives = 199/377 (52%), Gaps = 33/377 (8%) Query: 1 MSETAKKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYCTAAADLADAQA 60 M E ++V++GMSGG DSSV+A L + GY+V G+ + +E +D EY L DA++ Sbjct: 1 MIEENRRVLLGMSGGTDSSVAAMRLLEGGYEVTGITFRFYELNDSTEY------LEDARS 54 Query: 61 VCDKLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLG 120 + ++LGI T + + + E F+ EY GRTP P LCN +K+ L A+++G Sbjct: 55 LAERLGIRHITYDARDVFRKQIIEYFVQEYMEGRTPVPCTLCNNCLKW-PLLAKVADEMG 113 Query: 121 ADYIATGHYVRRADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQVRK 180 YIATGHYV++ +++G + D +KDQS+FL+ L + + + L P+G + K + R Sbjct: 114 IFYIATGHYVQKVELEGTYYITHAADPDKDQSFFLWGLKQDILRRILLPMGNITKVEARV 173 Query: 181 IAEDLGL-VTAKKKDSTGICFIGERKFREFLGRYLP----------------AQPGKIIT 223 A + G A KKDS G+CF +R FL +L + G+ + Sbjct: 174 WAAERGFQKVATKKDSIGVCFC-PMDYRSFLKEWLARNGQLRSENVSCWSEMVRRGRFVD 232 Query: 224 VDGDEIGEHQGLMYHTLGQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLM 283 G+ IG H+G ++T+GQR+GLGI + P +V + E N +V++ L Sbjct: 233 EKGNFIGWHEGYPFYTIGQRRGLGIHLNR-----PVFVKEIYPEKNEVVLSS---LSALE 284 Query: 284 SVGLIAQQLHWVDREPFTGTMRCTVKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTPG 343 + + + V+ + G VK RYR+ + CTV D+ + + EP+ A+ G Sbjct: 285 KTEMQLKDWNLVNPQKILGYNDVIVKIRYRKQENHCTVTVTPDNLLHIQLHEPLTAIAAG 344 Query: 344 QSAVFYNGEVCLGGGII 360 Q+A FY + LGGGII Sbjct: 345 QAAAFYRDGLLLGGGII 361 >UniRef50_C1TMD1 Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase with PP-loop ATPase domain n=1 Tax=Dethiosulfovibrio peptidovorans DSM 11002 RepID=C1TMD1_9BACT Length = 349 Score = 187 bits (476), Expect = 4e-46, Method: Compositional matrix adjust. Identities = 127/364 (34%), Positives = 189/364 (51%), Gaps = 24/364 (6%) Query: 2 SETAKKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYCTAAADLADAQAV 61 S T ++V++G+SGGVDS +A LL++ GY+ G+ + E++D D A + + Sbjct: 3 STTDRRVLLGVSGGVDSCAAALLLRRSGYEPIGVRLILKEKED-------RLDEARLKGL 55 Query: 62 CDKLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGA 121 + LGI + ++ + +V E FL Y+ TPNP +LCN+ +KF+ E A+ G Sbjct: 56 -NSLGIPVVEIDGRKAFRSSVVEPFLEAYERSITPNPCVLCNERVKFRLLFE-EADRRGI 113 Query: 122 DYIATGHYVRRADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQVRKI 181 + TGHY G S + R KDQSY LY L E + + +FP+ L KP+VR + Sbjct: 114 HTVGTGHYAGTTPYRGGSAISRAEIGGKDQSYMLYRLPSEWLDRLIFPLENLSKPEVRDL 173 Query: 182 A-EDLGLVTAKKKDSTGICFIGERKFREFLGRYL--PAQPGKIITVDGDEIGEHQGLMYH 238 + K DS ICFI FL L A PG +I++DGD +G H+GL + Sbjct: 174 VFREFDDEELKSGDSQDICFI-PGSLDSFLDENLREEAGPGPMISLDGDVLGRHRGLCRY 232 Query: 239 TLGQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLHWVDRE 298 T GQRKGLG+GG PW+VV KD N L++ + ++ +G L W + Sbjct: 233 TEGQRKGLGLGGG------PWFVVRKDRSENALILGR-ETDTSVVRIGF--SMLKW-QHK 282 Query: 299 PFTGTMRCTVKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTPGQSAVFYNGEVCLGGG 358 G++ + RYR IP V L+ EV+ ++ V GQS V Y+G LGGG Sbjct: 283 VNEGSV-YLAQHRYRSAPIPAVVSRLNQGSAEVLLEKSARGVALGQSLVLYDGPCLLGGG 341 Query: 359 IIEQ 362 +I++ Sbjct: 342 VIDR 345 >UniRef50_B5Y9X9 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase n=1 Tax=Coprothermobacter proteolyticus DSM 5265 RepID=B5Y9X9_COPPD Length = 347 Score = 187 bits (474), Expect = 7e-46, Method: Compositional matrix adjust. Identities = 120/358 (33%), Positives = 185/358 (51%), Gaps = 24/358 (6%) Query: 7 KVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDD-GEEYCTAAADLADAQAVCDKL 65 K+ VG+SGG+DS+VS L+++G+ V +F+ E + E+ C + A+ V Sbjct: 2 KIAVGLSGGIDSTVSLLRLKEEGHHVTAVFLNMLPEGEYQEKTCCSVDSQLLAKRVAMNQ 61 Query: 66 GIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGADYIA 125 G+ + + +V +F A K G TPNP + CN+ +K AF+E A + G D +A Sbjct: 62 GVPFEVWDLTETFQKHVINIFKAMVKKGLTPNPCVFCNRCVKIGAFVELAMQK-GFDAVA 120 Query: 126 TGHYVRRADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQVRKIAEDL 185 TGHY R+ + L + +DS KDQSY L + + +A+ LFP+GEL + +V A Sbjct: 121 TGHYARQRE----GNLYKAIDSWKDQSYMLALVEKQVLAKVLFPLGELTREEVISYAHSH 176 Query: 186 GLVTAKKKDSTGICFIGERKFREFLGRYLP--AQPGKIITVDGDEIGEHQGLMYHTLGQR 243 G + + S ICF+ +F+ + + +PG II G IGEH+G Y+T+GQR Sbjct: 177 G-IKHVPRSSQDICFMPHGGMEQFITQNISEVTKPGPII-FRGHIIGEHRGYPYYTVGQR 234 Query: 244 KGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLHWVDREPFTG- 302 +GLG+ EP YV D +N + V E L ++ + V F+ Sbjct: 235 RGLGVA-----HREPLYVKKIDPISNTVHVGTSEE--------LFSEHMTVVMMNQFSAL 281 Query: 303 TMRCTVKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTPGQSAVFYNGEVCLGGGII 360 T + +K RYR +P V+ ++ + V F +PV A+TPGQ AV Y G+ GII Sbjct: 282 TRQVEIKIRYRAHSVPAFVEQSNEPILSVRFSQPVRAITPGQIAVAYEGDKVQWAGII 339 >UniRef50_C0QYI3 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase n=2 Tax=Brachyspira RepID=C0QYI3_BRAHW Length = 352 Score = 186 bits (472), Expect = 1e-45, Method: Compositional matrix adjust. Identities = 127/366 (34%), Positives = 189/366 (51%), Gaps = 29/366 (7%) Query: 7 KVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDD-----GEEYCTAAADLAD-AQA 60 K+ VGMS GVDS+ +A LL++QG V G+ M W D+ G Y ++ + + Sbjct: 3 KIAVGMSAGVDSTTTAKLLKEQGNDVFGVTMLLWNGDERAPLSGSCYSPYQKNIVEECEK 62 Query: 61 VCDKLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLE-FAAEDL 119 +GI+ + + + + V + YK G TPNP I+CN +IKF A E + L Sbjct: 63 YAKAIGIDYYAFDISEMFQKKVIDYVTESYKKGFTPNPCIMCNSQIKFMALFEAIEKQGL 122 Query: 120 GADYIATGHY--VRRADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQ 177 D ATGHY V+ + + LLRG + KDQSYFLY L+ +Q+++ +FP+ E K Sbjct: 123 EFDKFATGHYAGVKYDEKTKRYLLLRGKNLIKDQSYFLYRLTQDQLSKIMFPMHENTKED 182 Query: 178 VRKIAEDLGLVTAKKKDSTGICFIGE--RKFREFLGRYLPAQPGKIITVDGDEI-GEHQG 234 R IA + L A+K +S F GE R F E + G II +D +EI G H+G Sbjct: 183 TRNIAREYNLDVAEKSESQDF-FAGEYHRLFDE-------DKEGSIINIDTNEILGHHKG 234 Query: 235 LMYHTLGQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLHW 294 + ++T+GQRKGLGI +EP ++V D E N + V + H + V + ++W Sbjct: 235 IWHYTVGQRKGLGI-----AYKEPLFIVALDSETNTVYVGNKN-HTFVNEVKIY--DVNW 286 Query: 295 VDREPFTGTMRCTVKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTPGQSAVFYNGEVC 354 + EP VKTR V +D++ I + F EP + GQS V Y+ ++ Sbjct: 287 I-AEPKQKEFEALVKTRSAHKGTMAAVIPIDENTINIKFHEPTGIIAKGQSCVCYDNDIT 345 Query: 355 LGGGII 360 L GGI+ Sbjct: 346 LCGGIV 351 >UniRef50_C7LUQ7 tRNA(5-methylaminomethyl-2-thiouridylate)-methyl transferase n=1 Tax=Desulfomicrobium baculatum DSM 4028 RepID=C7LUQ7_DESBD Length = 347 Score = 185 bits (470), Expect = 2e-45, Method: Compositional matrix adjust. Identities = 129/361 (35%), Positives = 174/361 (48%), Gaps = 26/361 (7%) Query: 7 KVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYCTAAADLADAQAVCDKLG 66 K + +SGG DS +S LL++ G +V + + DD A +C KL Sbjct: 3 KTAIALSGGADSLMSLLLLRETGAEVMAVHARFLGADD-------EALHERLHGLCAKLR 55 Query: 67 IELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGADYIAT 126 + H V+ E+ + V F+ Y++G TPNP CN IKF L+ E LGAD +AT Sbjct: 56 VPFHLVDLRREFEELVIAPFVRAYQSGLTPNPCATCNPAIKFGLLLDRVRE-LGADRLAT 114 Query: 127 GHYVRRADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQVRKIAEDLG 186 GHY R A + L RGLD++KDQSYFL + E+ Q +FP+ + K VR+ + G Sbjct: 115 GHYARLARTPHGAALYRGLDADKDQSYFLSRVPRERFEQVIFPLADWTKSAVRQALAERG 174 Query: 187 LVTAKKKDSTGICFIGERKFREFL--GRYLPAQPGKIITVDGDEIGEHQGLMYHTLGQRK 244 L ++S +CFI +R+FL PG I DG +G H GL HTLGQRK Sbjct: 175 LTPPAGRESQEVCFI-PSDYRDFLRERNVRLGGPGPITLADGTVLGRHAGLWNHTLGQRK 233 Query: 245 GLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIA--QQLHWVDREPFTG 302 GLGI +P YV KD N L+V E +S G L W P Sbjct: 234 GLGI-----AYSQPLYVTGKDFVQNRLLVGPKSE---TLSSGCRTGIPNLLW---PPELW 282 Query: 303 TMRCTVKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTPGQSAVFYNGE-VCLGGGIIE 361 +T YRQ P V ++D + + F EP TPGQ A Y+ E L G +IE Sbjct: 283 PGEILAQTIYRQRPEPARV-SVDQTGMTITFPEPRPMPTPGQVAAVYSAEGQVLAGAVIE 341 Query: 362 Q 362 + Sbjct: 342 E 342 >UniRef50_B1VZW7 tRNA-specific 2-thiouridylase mnmA n=44 Tax=Actinobacteria (class) RepID=MNMA_STRGG Length = 378 Score = 183 bits (465), Expect = 7e-45, Method: Compositional matrix adjust. Identities = 135/372 (36%), Positives = 190/372 (51%), Gaps = 19/372 (5%) Query: 1 MSETAKK---VIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDD----GEEYCTAAA 53 M++T+++ V+ MSGGVDS+V+A + G+ V G+ + G C Sbjct: 1 MTQTSQRPLRVLAAMSGGVDSAVAAARAAEAGHDVTGVHLALSANPQSFRTGARGCCTIE 60 Query: 54 DLADAQAVCDKLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLE 113 D DA+ D +GI + + A + ++V E F+AEY+AGRTPNP + CN++IKF A L+ Sbjct: 61 DSRDARRAADVIGIPFYVWDLAERFREDVVEDFVAEYEAGRTPNPCLRCNEKIKFAALLD 120 Query: 114 FAAEDLGADYIATGHYVRRADV-DGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGE 172 A LG D + TGHY DG L R D KDQSY L L +Q+A ++FP+G+ Sbjct: 121 KALA-LGFDAVCTGHYATVVLAEDGSRELHRASDMAKDQSYVLGVLDEKQLAHAMFPLGD 179 Query: 173 --LEKPQVRKIAEDLGLVTAKKKDSTGICFIGERKFREFLGRYL--PAQPGKIITVDGDE 228 K ++R AE GL AKK DS ICFI + + FL L PA+ G I+ G + Sbjct: 180 TLTTKDEIRAEAERRGLAVAKKPDSHDICFIADGDTQGFLANRLGGPAE-GDILDESGTK 238 Query: 229 IGEHQGLMYHTLGQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLI 288 +G H+G T+GQRKGL IG +P YV+D NN + V L L Sbjct: 239 LGTHEGAFGFTIGQRKGLKIGHPAP-DGKPRYVLDISPVNNTVTVGPVEA---LDVTALT 294 Query: 289 AQQLHWVDREPFTGTMRCTVKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTPGQSAVF 348 A + W P +G T + R + T + +D + V F EPV V PGQ+ V Sbjct: 295 AIKPRWCGTPP-SGPGTYTAQLRAHGGESEVTAELVDGTELNVTFTEPVRGVAPGQAVVL 353 Query: 349 YNGEVCLGGGII 360 Y+G +G I Sbjct: 354 YDGTRVVGSATI 365 >UniRef50_UPI0001BC5A6B tRNA (5-methylaminomethyl-2-thiouridylate) -methyltransferase n=2 Tax=Fusobacterium RepID=UPI0001BC5A6B Length = 345 Score = 183 bits (465), Expect = 7e-45, Method: Compositional matrix adjust. Identities = 124/362 (34%), Positives = 191/362 (52%), Gaps = 29/362 (8%) Query: 7 KVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYCTAAADLADAQAVCDKLG 66 KVI+GMSGGVDS+V+A+LLQ++GY+V + + ++ +L D Q + DK Sbjct: 4 KVILGMSGGVDSAVAAYLLQKEGYEVIAVHFSVHNTEATQK------ELQDCQKIADKFS 57 Query: 67 IELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGADYIAT 126 + L++ + E+ + + +L+E G+TP+P LC+ IKF + AE A+Y+AT Sbjct: 58 LTLYSYSLEKEFREKIISYYLSETGKGKTPSPCPLCDDSIKFHLLFQ-EAEKRKANYVAT 116 Query: 127 GHY--VRRADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQVRKIAED 184 GHY + R ++ + L +KDQ Y LY LS +++ + LFP+ LEK +VR++A D Sbjct: 117 GHYASISRNNICNTTLLEVKHHIHKDQCYMLYRLSPKKLNKILFPLASLEKAEVRELARD 176 Query: 185 LGLVTAKKKDSTGICFIGERKFREFLGRYLPA--QPGKIITVDGDEIGEHQGLMYHTLGQ 242 +GL ++KKDS GICF E ++ FL ++L Q G I G+ +G+H G +TLGQ Sbjct: 177 IGLFVSEKKDSQGICFAPE-GYQNFLKKHLAKKIQKGNFIDEKGNILGQHLGYPLYTLGQ 235 Query: 243 RKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLM--SVGLIAQQLHWVDREPF 300 R+GLGI T+E ++ D N + + LM V L LH PF Sbjct: 236 RRGLGI-----KTKEICFITKIDPGKNEITLGN---FESLMKDKVQLEDTVLHL----PF 283 Query: 301 --TGTMRCTVKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTPGQSAVFYNGEVCLGGG 358 M + R+ T +K ++ + + E A TPGQ V + +GGG Sbjct: 284 ERLKDMELLARPRFSSTGFFGKLKE-EEGELTFHYFEKNAHNTPGQHLVLFYKNYVVGGG 342 Query: 359 II 360 II Sbjct: 343 II 344 >UniRef50_B6JVF0 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase n=1 Tax=Schizosaccharomyces japonicus yFS275 RepID=B6JVF0_SCHJY Length = 414 Score = 179 bits (453), Expect = 2e-43, Method: Compositional matrix adjust. Identities = 120/401 (29%), Positives = 184/401 (45%), Gaps = 77/401 (19%) Query: 37 MKNWEEDDGEEYCTAAADLADAQAVCDKLGIELHTVNFAAEYWDNVFELFLAEYKAGRTP 96 M+NW ++ CT+ D + V +KLGI + +NF +YW VFE L Y+ G TP Sbjct: 1 MRNWLDESSPGGCTSERDWTLVKKVGEKLGIPVTRLNFEHDYWQRVFEPTLEHYRRGWTP 60 Query: 97 NPDILCNKEIKFKAFLE----FAAEDLGADYIATGHYVRR--ADVDGKSRLLRGLDSNKD 150 NPD+LCN+E+KF A E A+ A ++ATGHY R A ++ LLR D+ KD Sbjct: 61 NPDVLCNREVKFGALFEHLSHVMADSKRAWWVATGHYARTCIARDTNETCLLRPTDAKKD 120 Query: 151 QSYFLYTLSHEQIAQSLFPVGELEKPQVRKIAEDLGL-VTAKKKDSTGICFIGERK---- 205 Q+ FL + ++ + +++FP+ + K QV++ A GL +A + +S G+CF+ R Sbjct: 121 QTLFLCNIPYQALQRTIFPLWQHTKEQVKREAMLHGLEESATRPESMGLCFVSPRNIRGH 180 Query: 206 FREFLGRYL-PAQPGKIITVDGDEIGEH---QGLMYHTLGQRKGLGIGGTKEGTEEPWYV 261 FR FL YL P+ + G +G + +G+ T+G++ GL + + ++ PWYV Sbjct: 181 FRNFLAEYLEPSSDPLRVMFRGVCVGVYPRDKGIWSFTVGEKCGLSLAALQRVSQLPWYV 240 Query: 262 VDKDVENNILVVAQGHEHPRLMSVGLIAQQLHWVD---REPFTGT--MRCTVKTRYRQTD 316 KDV N + V G+ HP L S + W + F G + CTV+ R++Q Sbjct: 241 WKKDVATNAVHVCPGYRHPLLFSRAATCSEWGWASPWCKRAFEGADDVACTVRIRHQQQP 300 Query: 317 ---------IPCTV--------------KALDD--------------------------- 326 +PCT AL+ Sbjct: 301 GMSLGERYRVPCTAVDHAKRFSENPSRPSALNHFARQHCTTLRHICPTLPSRRVLTLQVP 360 Query: 327 -------DRIEVIFDEPVAAVTPGQSAVFYNGEVCLGGGII 360 D I + F +P + PGQ Y +C+GGG I Sbjct: 361 AHFRSRPDCIRLQFHQPQRGIAPGQHVAVYVDNLCVGGGPI 401 >UniRef50_A7I2L9 tRNA-specific 2-thiouridylase mnmA n=19 Tax=Campylobacter RepID=MNMA_CAMHC Length = 368 Score = 178 bits (452), Expect = 2e-43, Method: Compositional matrix adjust. Identities = 127/386 (32%), Positives = 187/386 (48%), Gaps = 52/386 (13%) Query: 7 KVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYCTAAADLADAQAVCDKLG 66 K++V +SGGVDS+VSA +L+ GY++EG +MK DD A ++ Q V + L Sbjct: 2 KILVALSGGVDSAVSAKILKDAGYEIEGCYMKLHGRDDYH-----AKNIEKVQDVGNFLE 56 Query: 67 IELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGADYIAT 126 I+ H ++ ++ VFE FL YK G+TPNP LCN+ IKF FL+FA G D IAT Sbjct: 57 IKTHILDLCDDFKREVFEPFLQTYKVGKTPNPCALCNRTIKFGKFLDFARSK-GCDKIAT 115 Query: 127 GHYVRRADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQVRKIAEDLG 186 GHY + + KS +D +KDQSYFL + I +FP+G + K V+K A Sbjct: 116 GHYAKIENNLIKS----AVDLSKDQSYFLANIEPRVIPNIVFPLGNMLKKDVKKFAASFP 171 Query: 187 LV--TAKKKDSTGICFIGERK---FREFLGRYLPAQPGKIITVDGDEIGEHQGLMYHTLG 241 + +K +S ICF+ REF Y PG + + G+ +G+H G M T+G Sbjct: 172 ELEKISKSSESNEICFVENTYIDVLREF---YKTETPGIVRNLQGEIVGKHNGYMNFTVG 228 Query: 242 QRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLH-WVDREPF 300 +R+G + G EP YVV D + N +VV + L Q + +++ + Sbjct: 229 KRRGFDVF----GAHEPHYVVKIDAKKNEIVVGSKAD---LDKNEFETQNFNAFLNIDEI 281 Query: 301 TGTMRCTVKTRYRQTDIPCTVK-ALDDD------------------------RIEVIFDE 335 VK RYR I C ++ +L+D+ + ++I Sbjct: 282 LKMDEIYVKIRYRSAKIACKIEISLNDNLNNESLTDKNLNFENSDFLNNQDLKAKIILKT 341 Query: 336 PVAAVTPGQSAVFYNGEVC-LGGGII 360 P V GQ AVFY+ C + G I Sbjct: 342 PANGVASGQLAVFYDKSDCVIASGFI 367 >UniRef50_C7LK58 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase n=1 Tax=Candidatus Sulcia muelleri SMDSEM RepID=C7LK58_SULMS Length = 470 Score = 177 bits (448), Expect = 7e-43, Method: Compositional matrix adjust. Identities = 100/202 (49%), Positives = 133/202 (65%), Gaps = 8/202 (3%) Query: 6 KKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYCTAAADLADAQAVCDKL 65 K+VIVGMSGGVDSSV+A LL++QGY+V G+++K + CT D DA V L Sbjct: 2 KRVIVGMSGGVDSSVAALLLKKQGYEVIGIYLK---YSNIYNQCTWREDSIDAMLVSQTL 58 Query: 66 GIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGADYIA 125 I + ++ + Y + + EY+ G TPNPDILCN +IKFK FLE DL +D+IA Sbjct: 59 KIPFYIIDISKIYKKKIIKYIYKEYRKGFTPNPDILCNSKIKFKIFLE-KLIDLKSDFIA 117 Query: 126 TGHYVRRADV--DGK--SRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQVRKI 181 TGHYV + ++ +GK ++ G+D NKDQSYFL L+ QI +SLFP+G L K +VR+I Sbjct: 118 TGHYVIKKEIFENGKIYYQIKSGIDQNKDQSYFLCKLNQNQIKKSLFPLGNLTKKEVRQI 177 Query: 182 AEDLGLVTAKKKDSTGICFIGE 203 A L+ AKKKDS GICFIG+ Sbjct: 178 ASKYHLINAKKKDSQGICFIGK 199 Score = 84.3 bits (207), Expect = 6e-15, Method: Compositional matrix adjust. Identities = 55/140 (39%), Positives = 78/140 (55%), Gaps = 11/140 (7%) Query: 225 DGDEIGEHQGLMYHTLGQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMS 284 DG IG+H G + T GQRKGL IGG K P +V++KD++NNIL V G HP L + Sbjct: 337 DGKIIGKHIGAHFFTKGQRKGLKIGGYK----FPLFVIEKDIKNNILYVGMGKNHPGLYT 392 Query: 285 -VGLIAQQ-LHWV--DREPFTGTMRCTVKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAV 340 V LI ++ +HW+ + + F ++C + RYRQ T+ ++I V F+ P AV Sbjct: 393 KVVLIKKKNIHWINPNHDFFKKEVKCRI--RYRQKLQKATLYK-KKNKIYVEFEIPQLAV 449 Query: 341 TPGQSAVFYNGEVCLGGGII 360 GQ V+Y +G G I Sbjct: 450 NAGQFIVWYINNEVIGSGRI 469 >UniRef50_D1Y320 tRNA methyl transferase n=1 Tax=Pyramidobacter piscolens W5455 RepID=D1Y320_9BACT Length = 346 Score = 176 bits (447), Expect = 1e-42, Method: Compositional matrix adjust. Identities = 123/372 (33%), Positives = 191/372 (51%), Gaps = 45/372 (12%) Query: 5 AKKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYCTAAADLADAQAVCDK 64 ++K++VG+SGGVDS++SA L+ GY V A L D + D+ Sbjct: 2 SEKILVGVSGGVDSALSALRLRDLGYDVT----------------AAHLILKDGEDPTDR 45 Query: 65 LGIE-------LHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAE 117 L +E +H ++ A + + V FL Y+ G TPNP ++CN +KF+A E A+ Sbjct: 46 LRLERLARHVPVHELDCRARFCERVVRPFLDAYRKGLTPNPCVICNAALKFRALFEL-AD 104 Query: 118 DLGADYIATGHYVRRADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVG-ELEKP 176 LG D +ATGHY R G+ + DS KDQ+Y L L HE +++ FP+ E K Sbjct: 105 RLGIDKVATGHYARVLK-RGRRWAIARTDSPKDQTYMLCRLPHEWLSRLCFPLSEERSKT 163 Query: 177 QVR-KIAEDLGLVTAKKKDSTGICFIGERKFREFLGRYLPAQP---GKIITVDGDEIGEH 232 V+ ++A LG + DS GICF+ FL +L A+ G+++ DG+++G H Sbjct: 164 GVKNELASRLGAERLAQGDSQGICFLEGGSLERFLEDHLAAEERHIGRMVGHDGEDLGPH 223 Query: 233 QGLMYHTLGQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIA-QQ 291 +GL+++T GQR+GLG+ + PW+V +D +N L+++ G E +VG I + Sbjct: 224 KGLIFYTEGQRRGLGL------SRGPWFVARRDFASNRLLLSHGTE----ATVGTIYFEN 273 Query: 292 LHWVDREPFTGTMRCTVKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTPGQSAVFYN- 350 W ++ C V+ YR +P + D V EP +V+ GQ+ V Y+ Sbjct: 274 ARW--QQEVRAGQDCLVQYCYRARPVPGRLADCHDGGGTVELQEPAGSVSIGQALVLYDV 331 Query: 351 -GEVCLGGGIIE 361 V LGGG I+ Sbjct: 332 AERVLLGGGFIK 343 >UniRef50_Q313S6 tRNA-specific 2-thiouridylase mnmA n=7 Tax=Desulfovibrionales RepID=MNMA_DESDG Length = 356 Score = 176 bits (445), Expect = 2e-42, Method: Compositional matrix adjust. Identities = 130/367 (35%), Positives = 173/367 (47%), Gaps = 31/367 (8%) Query: 8 VIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYCTAAADLADAQAVCDKLGI 67 + V +SGG DS + + + G+QV L D E T A + + C LG Sbjct: 3 IAVAVSGGTDSLFALLQVLEAGHQVTALHAHFLSPHDTPE--TTAHNTQAIEKACRALGA 60 Query: 68 ELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGADYIATG 127 + H + +A + +V E F+ Y+ GRTPNP CN +KF L A LGA IATG Sbjct: 61 DFHVEDLSAAFRKHVIEPFIDAYRQGRTPNPCARCNASMKF-GLLADTARKLGAQAIATG 119 Query: 128 HYVR-RADVD---GKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQVRKIAE 183 HY R + D+ L RG D KDQSYFL + ++A ++FP+G K VR + Sbjct: 120 HYARLQPDLPRPGNTVSLWRGDDPAKDQSYFLSLVPQHRLACAVFPLGGWRKQDVRAHLK 179 Query: 184 DLGLVTAKKKDSTGICFIGERKFREFLGRYLPAQP--GKIITVDGDEIGEHQGLMYHTLG 241 G+V +S ICFI +R +L + P G ++ DG +G H GL +T G Sbjct: 180 QRGIVPPLPSESQEICFIPGDDYRAYLTAHAAGLPGAGPMVLRDGHVVGHHNGLWQYTEG 239 Query: 242 QRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHP----RLMSVGLIAQQLHWVDR 297 QR+GLGI + EP YV++KDV N LVV + R + V + W D Sbjct: 240 QRRGLGIAWS-----EPLYVLEKDVSRNALVVGTRKQLTARGCRCVGVNTLVPPDQWPD- 293 Query: 298 EPFTGTMRCTVKTRYRQTDIPCTVKALDD--DRIEVIFDEPVAAVTPGQSAVFYN--GEV 353 VKTRYRQT I V D D + VIF GQ A Y+ G V Sbjct: 294 -------AVYVKTRYRQTMIAAQVTPDADGADTMRVIFAASHTPPAAGQVAAVYDAAGRV 346 Query: 354 CLGGGII 360 L GGII Sbjct: 347 -LAGGII 352 >UniRef50_D2NS67 Predicted tRNA methyltransferase n=4 Tax=Actinomycetales RepID=D2NS67_9MICC Length = 407 Score = 174 bits (442), Expect = 3e-42, Method: Compositional matrix adjust. Identities = 137/390 (35%), Positives = 196/390 (50%), Gaps = 32/390 (8%) Query: 7 KVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEED----DGEEYCTAAADLADAQAVC 62 K++ MSGGVDS+V+A + G++V G+ + G C D DA+ VC Sbjct: 2 KILAAMSGGVDSAVAAARAVEAGHEVVGVHLALSRMPGTLRTGSRGCCTLEDSMDARRVC 61 Query: 63 DKLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGAD 122 +LGI +F+ + ++V + F++EY+AGRTPNP + CN++IKF A LE A LG D Sbjct: 62 SQLGIPFFVWDFSERFKEDVVDDFISEYEAGRTPNPCMRCNEKIKFAALLERALA-LGFD 120 Query: 123 YIATGHYVRRADV-DGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGEL-EKPQVRK 180 + TGHY R DG L R D KDQSY L L+HEQ+ + FP+ + K QVR Sbjct: 121 AVVTGHYARVITTEDGNRELHRAADWAKDQSYVLGVLTHEQLKHAWFPLADTPSKAQVRA 180 Query: 181 IAEDLGLVTAKKKDSTGICFIGERKFREFLGRYLPAQPGKIITVDGDEIGEHQGLMYHTL 240 A + G AKK DS ICFI E R +LG ++ +PG I G+ +GEH G +T+ Sbjct: 181 EAAERGFSVAKKPDSYDICFIPEGDTRAWLGDHITMRPGLIKDTHGEVLGEHPGAQAYTV 240 Query: 241 GQRKGLGIGGTKEGTEEPWYVVD-KDVENNILVVAQG----HE--HPRLMSVGLIAQQLH 293 GQRKGL + G +P +V++ + EN ++V ++ HE R G+ +Q Sbjct: 241 GQRKGLAL-GRPAADGKPRFVLEVRPKENEVIVGSRELLAVHEIRGIRATWAGVPVEQAA 299 Query: 294 WVDREPFTGTMRC---TVKTRYRQTDIPCTVKAL-----DDD-------RIEVIFD--EP 336 EP R V + R P KA D + R+E + +P Sbjct: 300 RFLEEPAQLGARSEEFEVTAQVRAHADPVRAKAYMTWAPDPEAEEEGTLRLETVVRLLDP 359 Query: 337 VAAVTPGQSAVFYNGEVCLGGGIIEQRLPL 366 ++ V PGQ+ V Y G LG I + L Sbjct: 360 LSGVAPGQTMVLYQGTRVLGQSTIARAYSL 389 >UniRef50_A8NDW7 Putative uncharacterized protein n=1 Tax=Coprinopsis cinerea okayama7#130 RepID=A8NDW7_COPC7 Length = 299 Score = 174 bits (441), Expect = 5e-42, Method: Compositional matrix adjust. Identities = 113/326 (34%), Positives = 160/326 (49%), Gaps = 46/326 (14%) Query: 12 MSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDD---GEEYCTAAADLADAQAVCDKLGIE 68 MSGGVDSSV+A LL QQ Y + +FM+NW+ D + C D D Q VC KL I Sbjct: 1 MSGGVDSSVAALLLAQQDYDLSAVFMRNWDTRDESGSDRGCEWEKDWEDVQRVCKKLDIP 60 Query: 69 LHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGAD--YIAT 126 ++ AE N+EIKF A LE D + AT Sbjct: 61 CSMLSRKAE------------------------DNREIKFGALLERLPPDSSGQRPWFAT 96 Query: 127 GHYVRRADVDG---KSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQVRKIAE 183 GHY R+ +G + +L+R D +KDQ+Y+L ++S + ++LFP+ L+KPQVR++A+ Sbjct: 97 GHYARKTWSEGPNARPKLVRPADGHKDQTYYLSSISESGLQRALFPINHLQKPQVRELAQ 156 Query: 184 DLGLVTAKKKDSTGICFIGER-KFREFLGRYLPAQPGKII-TVDGDEIGEHQGLMYHTLG 241 L A++ DS GICF+GE+ KF FL Y+PAQ G II G +G+HQGL +T+G Sbjct: 157 KHDLHNAQRPDSVGICFVGEKAKFHNFLSNYIPAQKGLIIDETTGKVLGKHQGLWNYTIG 216 Query: 242 QRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLHWVDREPFT 301 + G G V KD N + V G H L + + + W+ + Sbjct: 217 E------GSRLPGMPTRMAVSRKDPSTNTIYVVPGMRHESLYTNVINVPEFTWIWSDSVP 270 Query: 302 GTM------RCTVKTRYRQTDIPCTV 321 + R +V RYR +P V Sbjct: 271 TELDTPEGFRASVMHRYRMKAVPFLV 296 >UniRef50_A7ZEK1 tRNA-specific 2-thiouridylase mnmA n=4 Tax=Campylobacter RepID=MNMA_CAMC1 Length = 340 Score = 174 bits (440), Expect = 7e-42, Method: Compositional matrix adjust. Identities = 111/360 (30%), Positives = 193/360 (53%), Gaps = 25/360 (6%) Query: 7 KVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYCTAAADLADAQAVCDKLG 66 K++V MSGGVDS+++A LQ+ G++V+G +M ++ E ++ + V + LG Sbjct: 2 KIMVAMSGGVDSTMTAKFLQEAGHEVQGCYMMLHQKPGYHE-----ENIRKVKKVGEYLG 56 Query: 67 IELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGADYIAT 126 I++H ++ ++ + V++ F+ YK G+TPNP LCNK IK A L+FA + G + +AT Sbjct: 57 IKVHILDLQDKFNEYVYDPFVRLYKEGKTPNPCALCNKFIKLGALLDFAKVN-GCEKLAT 115 Query: 127 GHYVRRADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQVRKIAEDLG 186 GHYV+ D + D +KDQSYFL + E + +FP+G+ K ++++A + Sbjct: 116 GHYVQVVD----GFITCAKDPSKDQSYFLAQVPKEVLKDVIFPLGDKFKKDIKELARGVK 171 Query: 187 LVT--AKKKDSTGICFIGERKFREFLGRYLPAQ-PGKIITVDGDEIGEHQGLMYHTLGQR 243 ++ A + +S+ ICF+ E + E L ++ PG ++ DG+ IG HQG M++T+G+R Sbjct: 172 VLEEFATQAESSEICFV-ENTYIEVLNKHYNTNLPGNVVDKDGNIIGRHQGYMHYTIGKR 230 Query: 244 KGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLHWVDREPFTGT 303 +G + G EP +V+ + E N +VV G + V + ++D + F Sbjct: 231 RGFEVF----GAHEPHFVIKINAEKNEIVV--GTKDDLAQKVVELENVNLFIDEDKF--- 281 Query: 304 MRCTVKTRYRQTDIPCTVKALDDDRI-EVIFDEPVAAVTPGQSAVFYNGEVCLGGGIIEQ 362 C K RYR + V+ + ++ ++ V GQ V Y+G+ + G I+ Sbjct: 282 -ECETKIRYRSPKLEAFVEVDKSSKTAKLTLNQNALGVAQGQLCVMYDGDRVIASGFIKN 340 >UniRef50_B2GL48 tRNA-specific 2-thiouridylase mnmA n=6 Tax=Micrococcineae RepID=MNMA_KOCRD Length = 383 Score = 171 bits (434), Expect = 3e-41, Method: Compositional matrix adjust. Identities = 130/373 (34%), Positives = 188/373 (50%), Gaps = 20/373 (5%) Query: 7 KVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEED----DGEEYCTAAADLADAQAVC 62 +V+ MSGGVDS+V+A G++V G+ + G C D DA Sbjct: 2 RVLAAMSGGVDSAVAAARAVDAGHEVTGVHLALSRTPGTLRTGARGCCTIEDSRDAWRAA 61 Query: 63 DKLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGAD 122 +KLGI + +F+ + +V + F+AEY AGRTPNP + CN++IKF A LE A LG D Sbjct: 62 EKLGIPYYVWDFSERFQADVVDDFVAEYAAGRTPNPCMRCNEKIKFAALLEKALA-LGFD 120 Query: 123 YIATGHYVRRAD-VDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGEL-EKPQVRK 180 + TGHY + + DG L R D KDQSY L L+ EQ+ ++FP+ E K QVR Sbjct: 121 AVCTGHYAKVVEGPDGHKELHRAADWAKDQSYVLGVLTAEQLEHAIFPLAETPSKAQVRA 180 Query: 181 IAEDLGLVTAKKKDSTGICFIGERKFREFLGRYLPAQPGKIITVDGDEIGEHQGLMYHTL 240 AE+ GL A K DS ICFI + R +L ++ PG+I+ +G+E+GEH+G +T+ Sbjct: 181 EAEERGLSVATKPDSHDICFIPDGDTRGWLADHMDLDPGRIVDTEGNELGEHRGAQAYTV 240 Query: 241 GQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGH-------EHPRLMSVGLIAQQLH 293 GQR+GL I G +P +V++ + N +VV E R GL +++ Sbjct: 241 GQRRGLHI-GRPAPDGKPRFVLEIRPKTNEVVVGPEQLLAIDVMEGIRPSWAGLPPREVA 299 Query: 294 WVDREPFTGTMRCTVKTRYRQTDIPCTVKAL-----DDDRIEVIFDEPVAAVTPGQSAVF 348 + +P + V + R P +A R+ V D V PGQ+ V Sbjct: 300 ALGADPKARSEEFEVTVQVRAHGDPAPARAWLTRSEGTPRLHVRLDTAQRGVAPGQTMVL 359 Query: 349 YNGEVCLGGGIIE 361 Y G LG I+ Sbjct: 360 YQGTRVLGQATID 372 >UniRef50_Q1MRW7 tRNA-specific 2-thiouridylase mnmA n=1 Tax=Lawsonia intracellularis PHE/MN1-00 RepID=MNMA_LAWIP Length = 352 Score = 171 bits (433), Expect = 3e-41, Method: Compositional matrix adjust. Identities = 119/373 (31%), Positives = 188/373 (50%), Gaps = 37/373 (9%) Query: 7 KVIVGMSGGVDSSVSAWLLQQQ--GYQVEGLFMKNWEEDDGEEYCTAAADLADAQAVCDK 64 V V +SGG DS + L++ + V L + E+ + + + C Sbjct: 2 NVAVAVSGGTDSLYTLATLREAFGNHHVFALHARFKEQITNDP-------VPALKEQCHN 54 Query: 65 LGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGADYI 124 L + LH V+ E+ + + F+ Y G+TPNP + CN ++KF L+ A++LGA+ I Sbjct: 55 LNVPLHVVDLHKEFNELIIRPFIKAYADGKTPNPCVHCNAKVKF-GLLQKKAQELGANQI 113 Query: 125 ATGHYVRRADVDGKSRLLR-GLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQVRKIAE 183 ATGHYV D D + L+ G DS KDQSYFL EQ+ ++FP+G L K +VR+ + Sbjct: 114 ATGHYVSLIDHDLYGKALKCGADSTKDQSYFLALTPREQLQTAIFPLGTLRKTEVRERLQ 173 Query: 184 DLGLVTAKKKDSTGICFIGERKFREFLGRY---LPAQPGKIITVDGDEIGEHQGLMYHTL 240 +GL K+S ICF+ +R+FL L ++ G+++ +DG +G+H+GL +T Sbjct: 174 KMGLEVPLPKESQEICFVPNDDYRKFLQSSDVDLLSE-GRMVMLDGTLVGKHKGLWKYTE 232 Query: 241 GQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGH----EHPRLMSVGLIAQQLHWVD 296 GQR+GLG+ + EP YV K+ N LV+ + + + Q +W Sbjct: 233 GQRRGLGVSWS-----EPLYVAHKNHSCNELVLGTAKDILVDTCTAQDINFLVPQDNW-P 286 Query: 297 REPFTGTMRCTVKTRYRQTDIPCTVKALDD----DRIEVIFDEPVAAVTPGQ-SAVFYNG 351 +E F V+TRYRQ +P ++ + + +I + F P PGQ +A+F Sbjct: 287 KELF-------VRTRYRQQAVPADIQFVTNTSSSKKITIHFHSPQLPAAPGQLAAIFDKS 339 Query: 352 EVCLGGGIIEQRL 364 L GG+I L Sbjct: 340 GYVLAGGLITNDL 352 >UniRef50_D1B719 tRNA(5-methylaminomethyl-2-thiouridylate)-methyl transferase n=1 Tax=Thermanaerovibrio acidaminovorans DSM 6589 RepID=D1B719_THEAS Length = 346 Score = 169 bits (429), Expect = 1e-40, Method: Compositional matrix adjust. Identities = 121/346 (34%), Positives = 178/346 (51%), Gaps = 28/346 (8%) Query: 12 MSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYCTAAADLADAQAVCDKLGIELHT 71 MSGGVDSSV+A +L+ +G++ G+ + + + A+ + LGI Sbjct: 10 MSGGVDSSVTAMILKGEGHRPLGVTLLMSPSSS-----ECSRSVQLARRTAEILGIRHTV 64 Query: 72 VNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGADYI--ATGHY 129 ++ + +V + F EY AGRTPNP CN+ +K E + +G D I ATGHY Sbjct: 65 LDLRDLFRRHVMDKFRTEYMAGRTPNPCSDCNRNVKLGGLAE-RLDRMGLDGIPMATGHY 123 Query: 130 VRRADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQVRKIAEDLGLVT 189 R + L GLD +DQSYFL + I + +FP+G + K QVR +AE+ L Sbjct: 124 ARILKDPAGAHLAMGLDHRRDQSYFLAEVPKGIIRRLMFPLGGMTKEQVRLLAEEARLPA 183 Query: 190 AKKKDSTGICFIGERKFREFLGRYLPAQPGKIITVDGDEIGEHQGLMYHTLGQRKGLGIG 249 ++ DS CF+ + +RE +G + +Q G I+ + G+ +G HQG T+GQRKGLG+ Sbjct: 184 RREADSMDSCFVEDGDYREVIGPVIDSQ-GPIVDLRGNVLGIHQGFHRFTVGQRKGLGVS 242 Query: 250 GTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLHWVDREPFTGTMRCTV- 308 T E YV K ++ +VVA RLM + A +W++ G +RC Sbjct: 243 ST-----EALYV--KRIDPPTVVVA---PRDRLMERHVTASGGNWLE----EGDLRCGAQ 288 Query: 309 ---KTRYRQTDIPCTVKALDDDRIEVIFD-EPVAAVTPGQSAVFYN 350 KTR + PCTV+ ++ DRI V+F E V A PGQ V Y Sbjct: 289 LLGKTRSQGRPSPCTVEEVEGDRIRVLFHGEGVFAPCPGQRLVLYR 334 >UniRef50_C7QYX8 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase n=13 Tax=Actinomycetales RepID=C7QYX8_JONDD Length = 423 Score = 169 bits (428), Expect = 1e-40, Method: Compositional matrix adjust. Identities = 128/421 (30%), Positives = 199/421 (47%), Gaps = 66/421 (15%) Query: 7 KVIVGMSGGVDSSVSAWLLQQQGYQVEGLFM---KNWEE-DDGEEYCTAAADLADAQAVC 62 +V+ MSGGVDS+V+A L + G+ V G+ M +N + G C + D +DA+ Sbjct: 2 RVLAAMSGGVDSAVAAALAVEAGHDVVGVHMALSRNRNQFRSGSRGCCSIEDASDARRAA 61 Query: 63 DKLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGAD 122 D LGI + + + ++ D V F++EY+AGRTPNP + CN+ IKF+A L+ A LG D Sbjct: 62 DILGIPYYVWDLSEKFEDTVVADFISEYEAGRTPNPCVRCNEHIKFEALLDKAMA-LGFD 120 Query: 123 YIATGHYVR-----RADVDGKSRLLRGL----DSNKDQSYFLYTLSHEQIAQSLFPVGEL 173 +ATGHY + DV G+ ++R L + KDQSY L + +++ ++FP+G Sbjct: 121 AVATGHYAQIIDRDTTDVHGQPTVIRELHRSPNDAKDQSYVLAVMGPDRLKNAIFPLGGY 180 Query: 174 -EKPQVRKIAEDLGLVTAKKKDSTGICFIGERKFREFLGRYLPAQPGKIITVDGDEIGEH 232 K +VR AE GL + K DS ICF+ + + FL L ++PG+++ DG+ +G H Sbjct: 181 ASKDEVRAEAERRGLSVSNKPDSYDICFVADGDTKGFLRDRLGSRPGEVLDTDGNVVGTH 240 Query: 233 QGLMYHTLGQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVG-LIAQQ 291 G +T+GQRKGL +G E +P YV+ +N ++V L+SV ++ + Sbjct: 241 DGAYAYTVGQRKGLALGRPAE-DGKPRYVLGVSTRDNTVIVGPSE----LLSVNRIVGDK 295 Query: 292 LHWVDREPFTGTMRCTV---------KTRYRQTDIPCTVKALDDDR-------------- 328 W + T T + R +P + + DR Sbjct: 296 AVWFATDILTDASLTTEGSDWFAIEGQVRAHGAALPGRARIVPLDRARDLMPAGREELAA 355 Query: 329 -----------------IEVIFDEPVAAVTPGQSAVFYNGEVCLGGGII-----EQRLPL 366 +EV P+ V GQS V Y G +G + + LP Sbjct: 356 ECTRVEGADPGHDHTALVEVELQSPLRGVAAGQSIVLYRGTRVIGQATVVASDRKATLPT 415 Query: 367 P 367 P Sbjct: 416 P 416 >UniRef50_C0GTF7 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase n=1 Tax=Desulfonatronospira thiodismutans ASO3-1 RepID=C0GTF7_9DELT Length = 344 Score = 168 bits (426), Expect = 2e-40, Method: Compositional matrix adjust. Identities = 120/362 (33%), Positives = 180/362 (49%), Gaps = 26/362 (7%) Query: 7 KVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYCTAAADLADAQAVCDKLG 66 ++ V +SGG+DS S +L+++G+ V L + + D E+ + +C LG Sbjct: 2 RIAVAVSGGLDSLASLVMLREEGHDVLALHARFFPRLD--EHLEK-----RLKGICTSLG 54 Query: 67 IELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGADYIAT 126 +E+H E+ V + F+ +Y G TPNP CN IKF L+ A E LGA +AT Sbjct: 55 VEMHVTLLQDEFAARVIDPFVQDYLDGLTPNPCARCNMRIKFGLLLDRALE-LGASALAT 113 Query: 127 GHYVRRADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQVRKIAEDLG 186 GHY L+R LD KDQSYFL + ++A++ FP+ K +++ ++ Sbjct: 114 GHYAGIKKNSSGPVLMRALDQAKDQSYFLCLVPPRRLARAKFPMYHHFKSSMQEFLQNRN 173 Query: 187 LVTAKKKDSTGICFIGERKFREFLGRYLPAQ----PGKIITVDGDEIGEHQGLMYHTLGQ 242 + +++S ICFI +R+F+ L PG I+ G +G HQGL +T GQ Sbjct: 174 ITVPAREESNEICFI-PGDYRDFIAGRLEKSHEPLPGPIVDSSGRTLGRHQGLWRYTPGQ 232 Query: 243 RKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLHWVDREPFTG 302 R+GLGI + P YV+ KD+ +N LVV E + G + + EP Sbjct: 233 RRGLGI-----AFKHPLYVLRKDLASNTLVVGAREE----LGAGEFQARDVNILEEPRKW 283 Query: 303 TMRCTVKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTPGQSAVFYN--GEVCLGGGII 360 + V+TRYRQ P V+ L R+ V + PGQ A Y+ G+V L GGII Sbjct: 284 PLDLLVQTRYRQKARPAEVE-LWGQRMRVRYKGEPGLPVPGQVAAVYSPKGQV-LAGGII 341 Query: 361 EQ 362 +Q Sbjct: 342 QQ 343 >UniRef50_C2BUX5 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase n=3 Tax=Mobiluncus RepID=C2BUX5_9ACTO Length = 409 Score = 166 bits (421), Expect = 1e-39, Method: Compositional matrix adjust. Identities = 134/388 (34%), Positives = 190/388 (48%), Gaps = 53/388 (13%) Query: 7 KVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYCTAAAD----LADAQAVC 62 K++VG+SGGVDS+V+ LQ G++V G FM+ +A+ LADA V Sbjct: 8 KILVGLSGGVDSAVATARLQAAGHEVSGFFMQLESPSRPWSRPVTSAEPVDALADAHRVA 67 Query: 63 DKLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGAD 122 D LG+EL + A + V + F+ Y+ G TPNP + CN+ IKF +E A + G D Sbjct: 68 DFLGVELQVWDLAERFNRVVMDSFVQAYRDGLTPNPCVHCNRFIKFGYVIERARRE-GFD 126 Query: 123 YIATGHYVR--RADVDG----------------KSRLLRGLDSNKDQSYFLYTLSHEQIA 164 Y+ATGHY R R G LLRG KDQSY L E +A Sbjct: 127 YVATGHYARLWRPGQVGLIPVGVPPTVAEGAFPDFALLRGSAIGKDQSYVLAGARAEALA 186 Query: 165 QSLFPVGEL-EKPQVRKIAEDLGLVTAKKKDSTGICFIGERKFREFLGRYLPAQPGKIIT 223 +++FP+G++ +K R AE LG+ A K+DS ICFI + R FL + A G+I+ Sbjct: 187 RAVFPLGDVTDKAATRAEAEALGIPVAGKRDSFDICFIPDGDTRGFLRGCIGAALGQIVD 246 Query: 224 VDGDEIGEHQGLMYHTLGQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPR-L 282 DG +G H G +T+GQR+GL I + P YVV D E N + VA PR Sbjct: 247 EDGAVVGSHDGAFQYTVGQRRGLHIPRPHQ-DGAPRYVVGTDAETNTVFVA-----PRQA 300 Query: 283 MSVGLI--AQQLHWVDREPFTGTMRCT---------VKTRYRQTDIPCTVKAL------D 325 ++V I ++W+ +P + T + ++R P T +A+ D Sbjct: 301 LTVTEIQAGPAVNWLT-DPTRLGLGATGEGELDPVGLTIQFRAHGQPVTPQAVHLESSTD 359 Query: 326 DDRIEVIFDEPVAAVT---PGQSAVFYN 350 +++V P A VT PGQS V Y Sbjct: 360 GTKLQVAL-SPTAGVTGVAPGQSLVLYQ 386 >UniRef50_B6WY81 Putative uncharacterized protein n=1 Tax=Desulfovibrio piger ATCC 29098 RepID=B6WY81_9DELT Length = 387 Score = 157 bits (398), Expect = 4e-37, Method: Compositional matrix adjust. Identities = 131/402 (32%), Positives = 180/402 (44%), Gaps = 65/402 (16%) Query: 7 KVIVGMSGGVDSSVSAWLLQQQGYQV---EGLFMKNWEEDDGEEYCTAA----------- 52 ++ V +SGGVDS + L++QG+ V GLF+ + C A Sbjct: 3 QLAVAVSGGVDSLCALLRLREQGHDVLALHGLFLPDAASSG---PCPAPEGPRLLTAAEA 59 Query: 53 ----------ADLADAQAVCDKLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILC 102 + Q C +LGI LH + A + V F+ Y GRTPNP LC Sbjct: 60 LAAPLPPASRQAVEGLQTACGQLGIPLHVADMRAVFDREVVTPFVRAYARGRTPNPCALC 119 Query: 103 NKEIKFKAFLEFAAEDLGADYIATGHYVRRADVDGKSRLLRGLDSNKDQSYFLYTLSHEQ 162 N+ IKF A L+ A LGAD IATGHY R D L D KDQSYFL + E+ Sbjct: 120 NRAIKFGALLD-TALSLGADRIATGHYARLLDGPSGPMLAAADDLAKDQSYFLSLVPLER 178 Query: 163 IAQSLFPVGELEKPQVRKIAEDLGLVTAKKKDSTGICFI--GERKFREFL-------GRY 213 + +++FP+ +K ++ GL ++S ICFI GE +R FL G Sbjct: 179 LRRAIFPLARQDKATSIAQVKEAGLAVPVPQESQEICFIPAGEDAYRAFLERRWQAEGLS 238 Query: 214 LPAQPGKIITVDGDE-------IGEHQGLMYHTLGQRKGLGIGGTKEGTEEPWYVVDKDV 266 LP ++ G + + H+GL +T GQR+GLGI + EP YV+ K Sbjct: 239 LPGSGPVLLEEAGSDGRPVLRPLARHEGLWRYTEGQRRGLGIAHS-----EPLYVLRKQG 293 Query: 267 ENNILVV---AQGHEHPRLM-SVGLIAQQLHWVDREPFTGTMRCTVKTRYRQTDIPCTVK 322 E+N LVV A+ H L V L+ W D + R+RQ P V+ Sbjct: 294 EDNTLVVGGRARLGMHGCLTGPVNLLCPPEQWPD--------ILLARLRHRQRPTPAQVE 345 Query: 323 ALDDDRIEVIFDEPVAAVTPGQSAVFYN--GEVCLGGGIIEQ 362 L DD + V EP PGQ A Y+ G V L G ++ + Sbjct: 346 -LTDDGLRVTLAEPQFPSAPGQVAAIYDEQGRV-LAGALVRE 385 >UniRef50_C6HVS1 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase n=1 Tax=Leptospirillum ferrodiazotrophum RepID=C6HVS1_9BACT Length = 372 Score = 156 bits (395), Expect = 1e-36, Method: Compositional matrix adjust. Identities = 109/369 (29%), Positives = 181/369 (49%), Gaps = 27/369 (7%) Query: 6 KKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDD-------GEEYCTAAADLADA 58 K +++GMSGGVDS+VSAWLL+++GY V G+ ++ W +D GE C + Sbjct: 5 KSIVIGMSGGVDSAVSAWLLKKEGYDVTGVILRLWGKDSSEASKGWGERTC---CHVPMV 61 Query: 59 QAVCDK-LGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAE 117 + +C K L I V+ + + +V + F + Y+ G TPNP CN+++K +A E Sbjct: 62 EYLCQKILNIPYAIVDAESAFKSDVVDSFKSAYRTGETPNPCTSCNEKVKLPLLRRWAEE 121 Query: 118 DLGADYIATGHYV--RRADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEK 175 + G +ATGHY +R++ S L D KDQSYFL ++FPVG + K Sbjct: 122 N-GIPKVATGHYTYWKRSEDFNVSGLAMAHDLAKDQSYFLSRTPDLCPENTVFPVGRMSK 180 Query: 176 PQVRKIAEDLGLVTAKKKDSTGICFIGERKFREFLGRYLPAQ---PGKIITVDGDEIGEH 232 PQVR++A + G ++ +CF+ E++ EFL + P + T+ G+ +G Sbjct: 181 PQVRELAREAGFPVEGLLENQEVCFVSEKRVTEFLSHEIDQDHRGPWTVRTIAGEALGTI 240 Query: 233 QGLMYHTLGQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQL 292 + T GQRKGL + G + YV D++ L ++ + S + + Sbjct: 241 PTGIGLTRGQRKGLSVAGGRR-----LYVHTVDIQERQLWLSDRSDL--FESAFTVKSPM 293 Query: 293 HWVDREPFTGTMRCTVKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTPGQSAVFYNGE 352 + + V+ R + +PC V+ ++ R + + P + GQ A FY+ E Sbjct: 294 GMMFEKKGKKLGELFVRFRSTMSPVPCRVEDAEEGRFRL--ERPHDGIVEGQVAAFYDKE 351 Query: 353 -VCLGGGII 360 + +G G+I Sbjct: 352 NILVGSGLI 360 >UniRef50_C7M0G9 tRNA(5-methylaminomethyl-2-thiouridylate)-methyl transferase n=1 Tax=Acidimicrobium ferrooxidans DSM 10331 RepID=C7M0G9_ACIFD Length = 341 Score = 149 bits (375), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 112/348 (32%), Positives = 168/348 (48%), Gaps = 24/348 (6%) Query: 7 KVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYCTAAADLADAQAVCDKLG 66 +V+V MSGGVDSSV+A + ++ G+ V G+ ++ E G+ C + D+ DA+ V LG Sbjct: 3 RVVVAMSGGVDSSVAALMAREAGHDVIGVTLR-LTEAAGDRGCCSVGDVEDARTVAALLG 61 Query: 67 IELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGADYIAT 126 I + AE+ V E +L ++ G TPNP + CN+ +K A +A + LGA + T Sbjct: 62 INHIVADMRAEFHRAVVEPYLDAHRRGWTPNPCMSCNRYVKVTALAAWA-QRLGASRLVT 120 Query: 127 GHYVRRADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQVRKIAEDLG 186 GHY D + L+RG D KDQSY L + E +A+ P+GEL K +VR A G Sbjct: 121 GHYATVLD-GSRPMLVRGRDRRKDQSYVLADVPPEVLARLWLPLGELSKDEVRTRAHAAG 179 Query: 187 LVTAKKKDSTGICFIGERKFREFLGRYLPAQPGKIITVDGDEIGEHQGLMYHTLGQR-KG 245 L K+DS +CF+ + F+ + + V G+ +G T+GQR + Sbjct: 180 LPVWDKRDSQDVCFVPHGRA-AFVSAAVGLTDVPVRDVAGEPVGVTLPFELATVGQRLRE 238 Query: 246 LGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLHWVDR-EPFTGTM 304 G G+ P YV+ K + V G L++ I + +V R EP G Sbjct: 239 PGRSGST-----PRYVIAK----SRTAVRVGSASDLLVAAQPIEDLVSYVPRSEPLRG-- 287 Query: 305 RCTVKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTPGQSAVFYNGE 352 V+T +P ++ V FDEP V PGQ V Y+ + Sbjct: 288 --LVQTAAHGVALPGSLS-----EAAVAFDEPARRVAPGQRVVLYDAK 328 >UniRef50_B8IYA5 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase n=1 Tax=Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 RepID=B8IYA5_DESDA Length = 425 Score = 147 bits (371), Expect = 6e-34, Method: Compositional matrix adjust. Identities = 140/437 (32%), Positives = 183/437 (41%), Gaps = 106/437 (24%) Query: 2 SETAKKVIVGMSGGVDSSVSAWLLQQQGYQV---EGLFMKNWEEDDGEEYCTAAADLADA 58 S + V V +SGGVDS + +LQQ GY V GLF+ + A Sbjct: 15 STLSNTVAVAVSGGVDSLCALVMLQQAGYSVLALHGLFLPD----------AAPEPPPGL 64 Query: 59 QAVCDKLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAED 118 A C LG+ LH + + V F A Y AGRTPNP LCN+ IKF A + AA Sbjct: 65 AAACAALGVPLHVADLRPVFEREVLAPFAAAYAAGRTPNPCALCNRAIKFGALFD-AAMG 123 Query: 119 LGADYIATGHYVRRADV--DGKSRLL-RGLD----------------------------- 146 LGA +ATGHY R A D + LL GLD Sbjct: 124 LGAQRLATGHYARLAAAPEDAVTALLPEGLDPAASRDNARISAVDNGCGCTEGRHGVSGA 183 Query: 147 ----------SNKDQSYFLYTLSHEQIAQSLFPVGELEKPQVRKIAEDLGLVTAKKKDST 196 + KDQSYFL + E++A++ FP+ E +K + R+I GL +S Sbjct: 184 HPPLLAAAHDAAKDQSYFLSLVPRERLARACFPLAEQDKARSREIVARAGLAVPVPNESQ 243 Query: 197 GICFI------------GERKFREFLGR------YLPAQPGKIITVDG----DEIGEHQG 234 ICF +R FL R +P PG + D EI H+G Sbjct: 244 DICFAPVVSGAATAGLAAADAYRPFLERRWQKAALVPPGPGPVFLRDAAGGLREIARHKG 303 Query: 235 LMYHTLGQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLM---------SV 285 L +T GQRKGLGI + EP YV+ KD N LVV PR + + Sbjct: 304 LWRYTEGQRKGLGIAHS-----EPLYVLAKDGTANALVVG-----PRALLGVTRCLTGAA 353 Query: 286 GLIAQQLHWVDREPFTGTMRCTVKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTPGQS 345 + Q +W TG + V+ R+RQ P V R+++ F EP PGQ Sbjct: 354 NVSLPQQYW------TGEL--LVRLRHRQKPSPAVVTLDASGRLDICFAEPQFPSAPGQV 405 Query: 346 AVFYNGE-VCLGGGIIE 361 A Y+G L GI+E Sbjct: 406 AAVYDGRGHVLAAGIVE 422 >UniRef50_B6AN65 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase 1 n=2 Tax=Leptospirillum sp. Group II RepID=B6AN65_9BACT Length = 361 Score = 146 bits (368), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 117/370 (31%), Positives = 183/370 (49%), Gaps = 33/370 (8%) Query: 10 VGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDD-----GEE-----YCTAAADLADAQ 59 +G+SGG+DS+VSA LL++ G+ V G ++ W E+ G+E + A L + Sbjct: 1 MGLSGGIDSTVSALLLKEAGFDVYGAIVEIWSENSAGGQSGDEREKPWFERACCHLPMVK 60 Query: 60 AVCDK-LGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAED 118 +C++ L I ++ + + ++F Y G TPNP CN EIK K +++A E Sbjct: 61 FLCEEYLHIPYVRIDQKQNFQKKIVDVFREGYHNGVTPNPCTDCNAEIKIKTLIDWA-EQ 119 Query: 119 LGADYIATGHYVRRADVDGKSRLL---RGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEK 175 Y+ATGHY R ++RL + LD KDQSYFL + + + LFP+G K Sbjct: 120 QKISYVATGHYARN-HYSVRNRLWGIAQALDRKKDQSYFLSRVPEHVLRKVLFPLGHWTK 178 Query: 176 PQVRKIAEDLGLVTAKKKDSTGICFIGERKFREFLGRYLPAQPG---KIITVDGDEIGEH 232 +VR+ A + + ++ CF+ + FL R A + ++G++IGE Sbjct: 179 DKVREFARSKKIPVEEMVENMEACFLSAKNVTSFLKREEEAHSSGNWNVTDINGEKIGEI 238 Query: 233 QGLMYHTLGQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQL 292 + T GQRKG+G+ + E YV DV+N ++++ G + L I L Sbjct: 239 PTGIGLTKGQRKGIGVANS-----ERIYVKKVDVQNKVVIM--GSKKDILNRNFRIRDPL 291 Query: 293 HWVDREPFTGTMRCTVKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTPGQSAVFYNGE 352 + ++ TG + VK R +PC K D R E+ + VTPGQ AVFY+ E Sbjct: 292 GPLFQKKITGNL--FVKFRSVMEAVPCIEKG--DLRFELSNEND--GVTPGQIAVFYDDE 345 Query: 353 -VCLGGGIIE 361 + LG GI+E Sbjct: 346 QMVLGSGILE 355 >UniRef50_B0MXW7 Putative uncharacterized protein n=1 Tax=Alistipes putredinis DSM 17216 RepID=B0MXW7_9BACT Length = 339 Score = 144 bits (364), Expect = 4e-33, Method: Compositional matrix adjust. Identities = 114/363 (31%), Positives = 167/363 (46%), Gaps = 35/363 (9%) Query: 6 KKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYCTAAADLADAQAVCDKL 65 +V++G SGG+DS + LLQ GY V L + + +A L A+ L Sbjct: 4 NRVLLGFSGGIDSFAAVGLLQAAGYHVTALTLDMRGD---------SALLEKARLRAGAL 54 Query: 66 GIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGADYIA 125 GI + + V + F Y G TP P CN IK+ L A+ LG +IA Sbjct: 55 GIPWRMRSVRERFEREVVDYFTDSYFRGCTPAPCTRCNSRIKWPC-LAAEADALGIRHIA 113 Query: 126 TGHYVRRADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQVRKIAEDL 185 TGHY R GK + R D+ KDQSY+L+ L E + + L P+G + K R I E+L Sbjct: 114 TGHYFRITSAGGKRYVTRAADNRKDQSYYLWDLPQEILDRVLTPMGTVIK---RNIVEEL 170 Query: 186 GLVTAKKKDSTGICFIGERKFREFL---GRYLPAQPGKIITVDGDEIGEHQGLMYHTLGQ 242 A +++S G+CF+ R R+FL + +PG II G +G H G +T+GQ Sbjct: 171 ----ADRRESMGVCFLEGRPCRDFLRSRDKTEALRPGPIIDSAGHRLGTHDGAALYTIGQ 226 Query: 243 RKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLHWVDREPFTG 302 +KGL + W VV D N +V E L+ L + ++ + G Sbjct: 227 KKGLDL-------PPGWAVVAIDTAANRIVAG---EEKLLLHRTLEVGECRLIESDEVFG 276 Query: 303 T--MRCTVKTRYRQTD-IPCTVKALDDDRIEVIFDEPVAAVTPGQSAVFYNGEVCLGGGI 359 +R ++ R + A RIE+ ++P A GQ V Y GE +GGGI Sbjct: 277 ARDIRAVIRGIGRNPEGYAAVFPAASGIRIEL--EDPAWAPAAGQPVVLYRGERVVGGGI 334 Query: 360 IEQ 362 +E+ Sbjct: 335 LER 337 >UniRef50_B6KA02 tRNA methyltransferase domain-containing protein n=3 Tax=Toxoplasma gondii RepID=B6KA02_TOXGO Length = 1598 Score = 140 bits (354), Expect = 6e-32, Method: Composition-based stats. Identities = 101/328 (30%), Positives = 147/328 (44%), Gaps = 83/328 (25%) Query: 2 SETAKKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEE-------------DDGEEY 48 + + +V V +SGGVDSSVS LLQQ+G+ + F+K W D G Sbjct: 827 ASSPPQVAVLLSGGVDSSVSLCLLQQRGFAPQAFFIKVWLPELLLVSRHLNRLLDSGLAP 886 Query: 49 CTAAA-----DLADAQAVCDKLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCN 103 A DL A VC + + L + YW+ V + L E + G TPNPD CN Sbjct: 887 AAAGGCGWERDLLFADQVCRQARVPLEVLPLQEAYWEGVVQQMLDEARQGLTPNPDWWCN 946 Query: 104 KEIKFKAFLE--------FAAEDLG-----------ADY------------IATGHYVR- 131 + +KF AFL+ F+A + AD +A+GHY R Sbjct: 947 QRVKFGAFLDLLDGRETRFSARRIAGESEGENEKEEADMPFLRNSSRWTGAVASGHYARV 1006 Query: 132 --------------------------------RADVDGKSRLLRGLDSNKDQSYFLYTLS 159 ++ + ++RL RG D KDQSYFL LS Sbjct: 1007 VPAAETSRRSEEGEDTEDRDEDGEEDRGDKERGSEEERRTRLFRGKDRRKDQSYFLSGLS 1066 Query: 160 HEQIAQSLFPVGELEKPQVRKIAEDLGLVTAKKKDSTGICFIGERKFREFLGRYLPAQPG 219 Q+ + + PVG++EK +VR++A L L TA+++DS G+CF+G F +L + G Sbjct: 1067 QRQLRRLVTPVGDMEKVEVRRLAAALDLPTARRQDSQGLCFLGNLSLSFFFRHFLGSSTG 1126 Query: 220 KIITVDGD-EIGEHQGLMYHTLGQRKGL 246 ++ +G H GL T+GQRKG+ Sbjct: 1127 PVLHFPSCLALGSHDGLWNFTVGQRKGV 1154 >UniRef50_Q7X189 Lfe204p1 (Fragment) n=1 Tax=Leptospirillum ferrooxidans RepID=Q7X189_9BACT Length = 238 Score = 109 bits (272), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 65/194 (33%), Positives = 107/194 (55%), Gaps = 17/194 (8%) Query: 6 KKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYCTAAADLAD-------- 57 K+V+VGMSGGVDS+VSA +++Q GY V G ++ W+ +D E C +++ A Sbjct: 3 KRVLVGMSGGVDSAVSALIMKQSGYDVTGAIIEIWDSEDSSE-CHPSSENARPWSERGCC 61 Query: 58 ----AQAVCDK-LGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFL 112 + +C++ L I V+ ++ V + F EY TPNP + CN +K + Sbjct: 62 HVPMVRYLCEEVLEIPFVMVDRRDDFRKKVMDPFRDEYLKALTPNPCVTCNARVKIHELI 121 Query: 113 EFAAEDLGADYIATGHYVRR--ADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPV 170 A+ LG + +ATGHY R+ + V G+ + +G D + F +L E+IA+ ++P+ Sbjct: 122 AL-ADSLGIEMVATGHYARKVYSPVTGQYHVAKGRDPGEGPVLFFGSLKSEEIARLVWPL 180 Query: 171 GELEKPQVRKIAED 184 +L K +VRK+A D Sbjct: 181 SDLTKEEVRKLARD 194 >UniRef50_Q5DCM7 SJCHGC00881 protein n=2 Tax=Schistosoma japonicum RepID=Q5DCM7_SCHJA Length = 259 Score = 107 bits (266), Expect = 9e-22, Method: Compositional matrix adjust. Identities = 70/237 (29%), Positives = 113/237 (47%), Gaps = 49/237 (20%) Query: 167 LFPVGELEKPQVRKIAEDLGLV-TAKKKDSTGICFIGERKFREFLGRYLPAQPGKIITVD 225 +FPVG L K QV++IA+D+GL +++S G+CFIG+R+F EF+ YL +PG Sbjct: 1 MFPVGHLLKTQVKQIAQDIGLSRIYSRRESMGMCFIGKRRFSEFIDNYLEPRPGICKDFG 60 Query: 226 GDEI-GEHQGLMYHTLGQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMS 284 D++ EH G+ + TLGQR + + P+YV D I+ V + HP L Sbjct: 61 TDQVLEEHTGVHHFTLGQRVPM------KRFSGPYYVCKMDYHKQIIYVVRDPTHPSLFM 114 Query: 285 VGLIAQQLHWVDREPFTGT---------------MRCTVK--------TRYRQTDIP-CT 320 + W++ +PF+ +RC++K Y + D+ C Sbjct: 115 RKCWSGPAVWINSKPFSSINLKNIQFQWQNKWRPVRCSLKPFNEISLAAAYVKKDVKRCL 174 Query: 321 VK------------ALDDDR-----IEVIFDEPVAAVTPGQSAVFYNGEVCLGGGII 360 K +++D+R + + + P+ + PGQ FY+G VCLGG +I Sbjct: 175 SKSDNAALVNTIDASIEDNREIGPCLSIELEVPMRCLAPGQWCAFYDGNVCLGGAMI 231 >UniRef50_C1SG68 Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase with PP-loop ATPase domain n=1 Tax=Denitrovibrio acetiphilus DSM 12809 RepID=C1SG68_9BACT Length = 164 Score = 105 bits (263), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 63/169 (37%), Positives = 94/169 (55%), Gaps = 9/169 (5%) Query: 7 KVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYCTAAADLADAQAVCDKLG 66 KV++ MSGGVDS+++A +++++GY V G +K ++E T A L D + +LG Sbjct: 4 KVLIAMSGGVDSTLTAHIMKEKGYDVIGCTIKFFDEQ------TEA--LHDGEKAAKELG 55 Query: 67 IELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGADYIAT 126 I+ + ++ + ++V F+ Y GRTPNP CN+ KF +L + GA IAT Sbjct: 56 IDWYYADYTDYFKEDVISYFIRTYIQGRTPNPCAHCNRHAKFN-YLFREMKSKGATKIAT 114 Query: 127 GHYVRRADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEK 175 GHY + V K +G D KDQSY+L L Q FP+GE+EK Sbjct: 115 GHYAGKVKVGEKYFFKKGQDVRKDQSYYLCLLKDHQREVIEFPLGEMEK 163 >UniRef50_C9ZUV8 tRNA-methyl transferase, putative n=2 Tax=Trypanosoma brucei RepID=C9ZUV8_TRYBG Length = 557 Score = 105 bits (262), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 128/449 (28%), Positives = 176/449 (39%), Gaps = 138/449 (30%) Query: 35 LFMKNWEE----DDGE--------------EYCTAA-ADLADAQAVCDKLGI-----ELH 70 LFMKNW++ DG +C AA D DA V G+ L Sbjct: 85 LFMKNWDDVSEGSDGSASDTCENIGGNQRRRWCEAAEQDYHDAAEVARFAGLLSESEALP 144 Query: 71 TVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGADYIATGHYV 130 NF++ Y + F+ L Y G T N D+LCN EIKF A L A Y+ATGHY Sbjct: 145 LFNFSSHYVTSCFDRMLNSYARGNTLNVDVLCNSEIKFGALLHALHTSGRAQYVATGHYA 204 Query: 131 RR------------ADVDGKSRLLR--------GLDSNKDQSYFLYTLSHEQIAQSLFPV 170 R A G R R G D N DQ+ FL LS Q++ +FP+ Sbjct: 205 RTISLADTVFCSAAASESGNGRYTRVIARPFTAGQDLN-DQTLFLSRLSRLQLSNVIFPL 263 Query: 171 GEL--EKPQVRKIAEDLGLV-TAKKKDSTGICFIGERKFR-------------EFLG--- 211 G + K VR +A LGL + KK STG+CF+GER R E++ Sbjct: 264 GHVFQRKADVRVVASHLGLTRVSAKKTSTGLCFVGERYKRKAGKGGGFGAFLTEYMASAP 323 Query: 212 --------------RYLPAQPGKIITVD-----GDEIGEHQGLM---YHTLGQRKGLGIG 249 +YL A+ +II D G + + L+ Y T+GQR +G Sbjct: 324 EESGGKGVHADEETKYLDAETEQIIAADQLNIPGTVRRQDRTLLPAHYLTVGQRIRGAVG 383 Query: 250 GTKEGTEEPWYVVDKDV----------EN-------NILVVAQGHEHPRL---------- 282 + G+ +YV K+V EN N+ +V + + HP L Sbjct: 384 NS--GSPRCYYVQRKEVSPIHGYEKCGENCCIRYLRNVWLVNRWN-HPLLYNTLVKLSDV 440 Query: 283 -----MSVGLIAQQLHWVDREPFTG------TMRCTVKTRYRQTDIPCTVKALDDDRIE- 330 M+ L+ R P G +RC+ TR++ P ++ + E Sbjct: 441 VLPLRMTQLLMLSLAFPPSRSPRHGEEGEEVCLRCSCCTRHQDPLHPAVLRFRACEVQEF 500 Query: 331 ----------VIFDEPVAAVTPGQSAVFY 349 V FD PV A T GQ+ V Y Sbjct: 501 AGGTSVNFAVVEFDTPVRAATAGQTLVGY 529 >UniRef50_Q4QIT1 TRNA-methyl transferase, putative n=4 Tax=Leishmania RepID=Q4QIT1_LEIMA Length = 603 Score = 99.0 bits (245), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 134/481 (27%), Positives = 180/481 (37%), Gaps = 150/481 (31%) Query: 17 DSSVSAWLLQQQGYQVEGLFMKNWEEDDGEE-YCT-AAADLADAQAVCDKL------GIE 68 + S++A Q FM+NW +D +C A D DAQ V L G Sbjct: 80 EPSITAASYDAAPVQHTPFFMRNWHDDSAASGWCVRAQVDYDDAQQVARTLDLLPRDGTP 139 Query: 69 LHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAF---LEFAAEDLGADYIA 125 L + ++EY + FE LA Y AG T N D+LCN +IKF A L +A Sbjct: 140 LPWYDLSSEYVEQCFERMLAAYAAGHTLNVDVLCNSKIKFGALTRALRRTGSVFSETLLA 199 Query: 126 TGHYVRRADV--------DGKSR---LLRGLDSNK---DQSYFLYTLSHEQIAQSLFPVG 171 TGHY R D+ D K R L+R + + DQ+ FL + +A ++FP+G Sbjct: 200 TGHYARTWDLPHGVHGGDDAKRRPVLLVRPCSAGRDLNDQTVFLSRVPPSALATAIFPLG 259 Query: 172 EL--EKPQVRKIAE----DLGLVTA----------------KKKDSTGICFIG------- 202 L K VR +A G A +KK STGICF+G Sbjct: 260 HLFTCKADVRALARHSFGQSGSTAAVASSNGEPQRTVAHISRKKTSTGICFVGPPSAATC 319 Query: 203 ------ERKFREFLGRYLP----------------AQPGKIITVDGDEIGEHQGL----- 235 +F FL YLP A G+ + V GD G Sbjct: 320 AGNTSCSSRFPLFLNEYLPPPPPPSGPSTRTVFCDAVTGEELLVPGDTTEHFAGASLQSS 379 Query: 236 ---MYH--------------------TLGQRKGLGIGGTKEG--TEEPWYVVDK------ 264 +Y TLGQR L T +G E +YV DK Sbjct: 380 ACRLYRGPMCGALRVDYPGLLPAYAFTLGQRVRL-CRRTVDGRVREAAYYVADKVLAPLP 438 Query: 265 --DVENN----------ILVVAQGHEHPRLMSVGLIAQQLHW------------VDREPF 300 + +N + VVAQ + S +A LHW V+ E Sbjct: 439 LSALSDNKAVPVRLLAEVRVVAQWNNALLYTSQATVA-SLHWWLPLPMLHQRAVVNHERG 497 Query: 301 TGTMRCTVKTRYRQTDIPCTV--KALDDD----------RIEVIFDEPVAAVTPGQSAVF 348 +RC TR+ + P TV +A D++ R V FD P+ AVTPGQ+ V Sbjct: 498 MYGLRCHCCTRHHEALQPATVEWEAADEELSADAEVRVRRARVHFDAPLRAVTPGQALVA 557 Query: 349 Y 349 Y Sbjct: 558 Y 558 >UniRef50_C1SG69 Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase with PP-loop ATPase domain n=1 Tax=Denitrovibrio acetiphilus DSM 12809 RepID=C1SG69_9BACT Length = 211 Score = 97.4 bits (241), Expect = 7e-19, Method: Compositional matrix adjust. Identities = 63/191 (32%), Positives = 93/191 (48%), Gaps = 12/191 (6%) Query: 174 EKPQVRKIAEDLGLVTAKKKDSTGICFIGERKFREFLGRYLPAQPGK--IITVDGDEIGE 231 +K V+ A +LGL A K +S ICF+ +R+FL + K DG++ E Sbjct: 29 KKTDVKAKAAELGLSVADKDESQDICFLKGGDYRDFLESKIDKDSIKKGWFIKDGEKFKE 88 Query: 232 HQGLMYHTLGQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQ 291 H+G++Y+T+GQRKGLGIG EP +V D E+ +++ E + G+ Sbjct: 89 HEGIIYYTIGQRKGLGIG-----YHEPLFVKHIDAESGNIILGNKDE---VTGTGVKVHD 140 Query: 292 LHWVDREPFTGTMRCTVKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTPGQSAVFYNG 351 + D R VK RYR +PC V+ + ++FD P A TPGQ A Y Sbjct: 141 FVFPDDH--DRVFRAEVKVRYRMAPVPCMVEIHPGNTATILFDRPEFAPTPGQIACVYEN 198 Query: 352 EVCLGGGIIEQ 362 ++ GG IE Sbjct: 199 DLVTCGGYIES 209 >UniRef50_A5KCE1 tRNA methyl transferase, putative n=1 Tax=Plasmodium vivax RepID=A5KCE1_PLAVI Length = 837 Score = 94.0 bits (232), Expect = 9e-18, Method: Compositional matrix adjust. Identities = 65/244 (26%), Positives = 111/244 (45%), Gaps = 43/244 (17%) Query: 7 KVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYCTAAADLADAQAVCDKLG 66 +V +SGGVDS ++ LL+++ + V ++ +D + +DL + +C K Sbjct: 236 RVAHMLSGGVDSLMALRLLERKKFYVHNFYLHFAHQD------CSKSDLQYVKQICSKRK 289 Query: 67 IELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKF----KAFLEFAAEDLGA- 121 L VN EY + V L Y G+ PN DILCN+++K+ + + E G Sbjct: 290 -NLFIVNVNEEYTEQVLIPMLRSYSEGQIPNADILCNEKVKYHLLMRTMRKLCRERGGGW 348 Query: 122 --DYIATGHYVRRA--------------------DVDG---------KSRLLRGLDSNKD 150 Y++TGHY + ++DG + +L+ G D KD Sbjct: 349 NYSYVSTGHYAMISTNDEANANRLFNGNFPYVGDELDGEIPRRGPRKRYKLIVGRDERKD 408 Query: 151 QSYFLYTLSHEQIAQSLFPVGELEKPQVRKIAEDLGLVTAKKKDSTGICFIGERKFREFL 210 Q++FL + S +Q+++ LFP+ K V++I E ++++ G+C G L Sbjct: 409 QTFFLSSFSEKQLSKFLFPLCLRRKSDVKRIMERRAAGQYNRRETRGLCLYGRVDMHSLL 468 Query: 211 GRYL 214 G YL Sbjct: 469 GLYL 472 >UniRef50_Q4Y1X1 Putative uncharacterized protein (Fragment) n=1 Tax=Plasmodium chabaudi RepID=Q4Y1X1_PLACH Length = 601 Score = 92.8 bits (229), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 63/245 (25%), Positives = 105/245 (42%), Gaps = 42/245 (17%) Query: 7 KVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYCTAAADLADAQAVCDKLG 66 KV +SGG+DS ++ LL+++ + V+ + + Y + DL + +C K Sbjct: 260 KVAHMLSGGIDSLMALILLEKKKFYVDNFYF------NFAHYDCSKNDLKYVKNIC-KNR 312 Query: 67 IELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAE-------DL 119 LH +N EY++NVF L Y G PNPDI+CN++IK+ L+ D Sbjct: 313 NNLHIININNEYYENVFLPMLKSYSKGEVPNPDIVCNQKIKYNFLLKTIKSISKSKGTDF 372 Query: 120 GADYIATGHYVRRADVDG----------------------------KSRLLRGLDSNKDQ 151 YI+TGHY + D + +L+ D KDQ Sbjct: 373 NYSYISTGHYAMISTNDAQNCNNIFNNNFPYVKGKMGNKKNKKNKKRYKLVVSSDLKKDQ 432 Query: 152 SYFLYTLSHEQIAQSLFPVGELEKPQVRKIAEDLGLVTAKKKDSTGICFIGERKFREFLG 211 ++FL + S +Q+++ LFP+G K ++ + + ++ G+C G L Sbjct: 433 TFFLSSFSEKQLSKFLFPLGLYNKNDIKTFMKKHNITDYNPNETKGLCLYGNVDMHSLLR 492 Query: 212 RYLPA 216 Y Sbjct: 493 LYFKT 497 >UniRef50_B3L1V6 tRNA methyl transferase, putative n=1 Tax=Plasmodium knowlesi strain H RepID=B3L1V6_PLAKH Length = 906 Score = 88.6 bits (218), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 62/233 (26%), Positives = 106/233 (45%), Gaps = 43/233 (18%) Query: 7 KVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYCTAAADLADAQAVCDKLG 66 +V +SGGVDS ++ LL+++ + V F+ ++ + +DL + +C K Sbjct: 331 RVAHMLSGGVDSLMALRLLEKKKFYVHNFFLHFAHQE------CSKSDLRYVKKICSKRK 384 Query: 67 IELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFL----EFAAEDLGA- 121 L VN EY + V L Y G+ PN DI+CN+++K+ + + E G Sbjct: 385 -NLFIVNINEEYTEQVLIPMLRSYADGQIPNADIMCNEKVKYNLLMRKMKKLCRERGGRW 443 Query: 122 --DYIATGHYVRRA--------------------DVDGKS---------RLLRGLDSNKD 150 Y++TGHY + D DGK +L+ G D KD Sbjct: 444 DYSYVSTGHYAMISTNDVSNANKLFSGNFPYVGDDTDGKMPRRTPRKRYKLVVGRDVKKD 503 Query: 151 QSYFLYTLSHEQIAQSLFPVGELEKPQVRKIAEDLGLVTAKKKDSTGICFIGE 203 Q++FL +LS EQ+++ LFP+ K ++ + E ++++ G+C G Sbjct: 504 QTFFLSSLSEEQLSKFLFPLCLHRKSDIKMVMERREAGKYNQRETRGLCLYGR 556 >UniRef50_Q8IJK4 tRNA methyltransferase, putative n=1 Tax=Plasmodium falciparum 3D7 RepID=Q8IJK4_PLAF7 Length = 1084 Score = 70.1 bits (170), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 42/138 (30%), Positives = 68/138 (49%), Gaps = 21/138 (15%) Query: 12 MSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYCTAAADLADAQAVCDKLGIELHT 71 +SGGVDS ++ LL+++ + V+ F N+ D + D+ + +C L Sbjct: 454 LSGGVDSLMALHLLERKKFYVDNYFF-NFTNAD-----CSKNDIKYVKDICKNNKRNLFI 507 Query: 72 VNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEF-------------AAED 118 +N EY+D V L Y G+ PNPDI+CN++IK+ FL+ ++ Sbjct: 508 ININDEYFDEVLVPMLFFYADGKVPNPDIMCNQKIKYNFFLKVIKSIYKQKWNYRTKSKL 567 Query: 119 LGADYIATGHY--VRRAD 134 D+I+TGHY +R D Sbjct: 568 CNYDFISTGHYAMIRTND 585 Score = 47.4 bits (111), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 24/95 (25%), Positives = 45/95 (47%), Gaps = 7/95 (7%) Query: 140 RLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQVRKIAEDLGLVTAKKKDSTGIC 199 +LL D KDQ++FL + +H Q+++ +FP+ K V+K + + K++ G+C Sbjct: 656 KLLVSNDKKKDQTFFLSSFNHIQLSKFIFPLSLYTKKDVKKYMNENNINNYNHKETKGLC 715 Query: 200 FIGERKFREFLGRYLPAQPGKIITVDGDEIGEHQG 234 G + L +Y + + D+I Q Sbjct: 716 LFGNIDMQTLLHKYF-------VNTEKDDIKNKQN 743 >UniRef50_UPI000197A71F tRNA-specific 2-thiouridylase MnmA n=1 Tax=Helicobacter canadensis MIT 98-5491 RepID=UPI000197A71F Length = 155 Score = 69.7 bits (169), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 43/149 (28%), Positives = 73/149 (48%), Gaps = 13/149 (8%) Query: 217 QPGKIITVDGDEIGEHQGLMYHTLGQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQG 276 Q G ++ G++IG H+G M +T+G+RKG I +G P YV+ + ++N ++ Sbjct: 12 QKGDVLDSKGNKIGTHKGYMQYTIGKRKGFTI----KGALTPHYVLKINPQDNTIIAGSK 67 Query: 277 HE--HPRLMSVGLIAQQLHWVDREPFTGTMRCTVKTRYRQTDIPCTVKALDDDRIEVI-- 332 E ++ ++ L + + D + + C VK RY+ IP + + + ++I Sbjct: 68 EELATNKVQALNLSLPKEWFQDNK----VLDCEVKIRYKSHKIPAQITLMSNGNQDIITA 123 Query: 333 -FDEPVAAVTPGQSAVFYNGEVCLGGGII 360 E V GQ+ V YNG LGGG I Sbjct: 124 NLKESAYGVANGQALVLYNGNEVLGGGFI 152 >UniRef50_B3SFT2 Putative uncharacterized protein (Fragment) n=1 Tax=Trichoplax adhaerens RepID=B3SFT2_TRIAD Length = 116 Score = 62.8 bits (151), Expect = 2e-08, Method: Composition-based stats. Identities = 40/120 (33%), Positives = 60/120 (50%), Gaps = 9/120 (7%) Query: 242 QRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLHWV-DREPF 300 QRKG+GI K P YV+ D N ++V + + L S L + L+W+ + E Sbjct: 1 QRKGIGISNNK-----PLYVIKIDPITNKVIVGEKED---LKSTKLKIKDLNWLSNDEAL 52 Query: 301 TGTMRCTVKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTPGQSAVFYNGEVCLGGGII 360 + C+V+ R +I VK L + +VI P +TPGQ+ V Y+ + LGGG I Sbjct: 53 EKDISCSVRLRSNHKEINADVKYLGNGIADVILKSPYYGITPGQACVIYDKDRVLGGGWI 112 >UniRef50_UPI0001742DF3 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase n=1 Tax=candidate division TM7 single-cell isolate TM7a RepID=UPI0001742DF3 Length = 65 Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 32/61 (52%), Positives = 40/61 (65%), Gaps = 8/61 (13%) Query: 127 GHYVR-----RADVDGK---SRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQV 178 GHY R D +GK S +LRG+D NKDQ+YFL LS EQ+ + LFP+GE KPQ+ Sbjct: 5 GHYARIIHEEVEDENGKRIKSTMLRGVDDNKDQTYFLCQLSQEQLEKVLFPLGEYTKPQI 64 Query: 179 R 179 R Sbjct: 65 R 65 >UniRef50_C7H4N6 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase n=2 Tax=Faecalibacterium prausnitzii RepID=C7H4N6_9FIRM Length = 170 Score = 58.5 bits (140), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 58/183 (31%), Positives = 82/183 (44%), Gaps = 28/183 (15%) Query: 3 ETAKKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYCTAAADLADAQAVC 62 E KV+VG+ GG + +LQQQG+ V G ++ +D AA + A A Sbjct: 15 EQQDKVLVGLCGGTGCKAAVRILQQQGFAVMGAVVRLCTDD---PVVDAAKEAAKA---- 67 Query: 63 DKLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGAD 122 LGIE T+N A+E LA A T P +++F A L AA+ LG Sbjct: 68 --LGIECITLN-ASE---------LASQLAEETAAP-----ADLRFPALLA-AADRLGIQ 109 Query: 123 YIATGHYVR-RADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQVRKI 181 YIATGH R DG L D+S L L E + + + P+G+ V ++ Sbjct: 110 YIATGHRARVETGADGVHVLCPA--EIADESARLAALPQETLGRLILPLGDFSPEDVAEM 167 Query: 182 AED 184 A + Sbjct: 168 AAE 170 >UniRef50_C3XFA5 tRNA methyltransferase n=1 Tax=Helicobacter bilis ATCC 43879 RepID=C3XFA5_9HELI Length = 354 Score = 53.5 bits (127), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 46/160 (28%), Positives = 74/160 (46%), Gaps = 28/160 (17%) Query: 1 MSETAKKVIVGMSGGVDSSVSAWLLQQQGYQVEGL-----FMKNWEEDDGEEYCTAAADL 55 M++ + SGG+DS +S LL +QG +V L F N D EY AA Sbjct: 1 MTKKQISAVALFSGGLDSMISMQLLHEQGIKVYALNFNIGFGSN---KDKSEYFYNAA-- 55 Query: 56 ADAQAVCDKLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFA 115 ++G EL +N A +++DN+ LF +Y G+ NP I C+ + AF + Sbjct: 56 -------KQVGAELIQINIAKQFFDNI--LFKPQYGYGKYFNPCIDCHANMFSHAFAKMV 106 Query: 116 AEDLGADYIATGHYV-------RRADVDGKSRLLRGLDSN 148 +L AD+ +G + R+ +D +L+R + N Sbjct: 107 --ELKADFAISGEVLGQRPKSQRKEAMDQVKKLVRKIGEN 144 >UniRef50_C6X5B3 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase n=1 Tax=Flavobacteriaceae bacterium 3519-10 RepID=C6X5B3_FLAB3 Length = 178 Score = 51.6 bits (122), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 31/82 (37%), Positives = 40/82 (48%), Gaps = 6/82 (7%) Query: 225 DGDEIGEHQGLMYHTLGQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMS 284 DG +GEH+G LGQRK +G+G G P YV+ D N + V G +HP L+S Sbjct: 43 DGFLVGEHRGTSTFQLGQRKRIGVG----GKSAPLYVIGIDDAENRVFVGHGDDHPGLLS 98 Query: 285 VGLI--AQQLHWVDREPFTGTM 304 L A Q H V F + Sbjct: 99 KVLCFKASQFHLVQNPSFNQNL 120 >UniRef50_A8AAD7 PP-loop domain protein n=1 Tax=Ignicoccus hospitalis KIN4/I RepID=A8AAD7_IGNH4 Length = 383 Score = 51.6 bits (122), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 45/142 (31%), Positives = 69/142 (48%), Gaps = 15/142 (10%) Query: 3 ETAKKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYCTAAADLADAQAVC 62 E K+V++G+SGG DS +LL++ G +V + D Y + A+L A+ V Sbjct: 44 ELPKRVLLGLSGGKDSVALLYLLKKVGTEVVAATV-----DTVPNYTSLEAEL--AKRVA 96 Query: 63 DKLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGAD 122 ++LG+ +TV Y ++ YK R P +C+K + LE A LG + Sbjct: 97 EELGVTHYTV-----YAKELYGFTALSYKKLRR-APCSICSKLRRHA--LELLARRLGIE 148 Query: 123 YIATGHYVRRADVDGKSRLLRG 144 YIATGH + S +LRG Sbjct: 149 YIATGHNMDDMASWALSYILRG 170 >UniRef50_C9MRP4 tRNA(Ile)-lysidine synthase n=1 Tax=Prevotella veroralis F0319 RepID=C9MRP4_9BACT Length = 461 Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 31/125 (24%), Positives = 57/125 (45%), Gaps = 26/125 (20%) Query: 9 IVGMSGGVDSSVSAWLLQQQGYQVEGL----FMKNWEEDDGEEYCTAAADLADAQAVCDK 64 +V +SGG DS ++Q GY+ + + ++ E + EEYC Q++C + Sbjct: 22 LVALSGGADSVALLLTMRQLGYETDAVHCNFHLRGDESNRDEEYC---------QSLCKQ 72 Query: 65 LGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGADYI 124 L I LH +F + ++ + + +E++++ F + E LGAD I Sbjct: 73 LNIPLHIAHFDTLTYAEAHKVSIE------------MAARELRYRYFFQL-KEALGADAI 119 Query: 125 ATGHY 129 GH+ Sbjct: 120 CVGHH 124 >UniRef50_A1AMX6 Thiamine biosynthesis protein n=4 Tax=Desulfuromonadales RepID=A1AMX6_PELPD Length = 335 Score = 47.8 bits (112), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 39/128 (30%), Positives = 62/128 (48%), Gaps = 14/128 (10%) Query: 6 KKVIVGMSGGVDSSVSAWLLQQQGYQVEGL-FMKNW--EEDDGEEYCTAAADLADAQAVC 62 +K + SGG+DS ++ L+Q+QG +VE + F+ + DG E AAA +A Sbjct: 3 RKALALFSGGLDSILAVRLMQEQGIEVEAVSFVLPFFSCSSDGTERDLAAARVA------ 56 Query: 63 DKLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGAD 122 LGI + +NF E+ + + + G+ NP I C + KA + GAD Sbjct: 57 RHLGIPIWVINFGPEFLELIRNPL---HGYGKAVNPCIDCRIHMLVKAREQMV--KCGAD 111 Query: 123 YIATGHYV 130 +I TG + Sbjct: 112 FIITGEVL 119 >UniRef50_C7R8C6 tRNA(5-methylaminomethyl-2-thiouridylate)-methyl transferase n=12 Tax=Gammaproteobacteria RepID=C7R8C6_KANKD Length = 362 Score = 47.8 bits (112), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 37/130 (28%), Positives = 65/130 (50%), Gaps = 8/130 (6%) Query: 6 KKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYCTAAADLA-----DAQA 60 +K + +SGG+DS ++A ++Q+QG VEG+ +G + D ++ Sbjct: 18 RKAVALISGGLDSLLAAKVIQEQGIHVEGINFYTGFCVEGHTHAIRKKDKDKQKRNNSLW 77 Query: 61 VCDKLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLG 120 V ++LGI+LH ++ + EY D V ++ G NP + C + +A AE+ G Sbjct: 78 VAEQLGIKLHIIDISEEYKDIVLN---PKHGYGANLNPCLDCKIFMVNQAQAWAWAEENG 134 Query: 121 ADYIATGHYV 130 D+I TG + Sbjct: 135 FDFIITGEVI 144 >UniRef50_B2TJM2 Argininosuccinate synthase n=30 Tax=Bacteria RepID=B2TJM2_CLOBB Length = 330 Score = 47.8 bits (112), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 40/167 (23%), Positives = 84/167 (50%), Gaps = 25/167 (14%) Query: 7 KVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYCTAAADLADAQAVCDKLG 66 K + +SGG+DS ++A L+++QG +V G+ K++ ++ +A+ + +++G Sbjct: 3 KALAMISGGLDSILAAKLIKEQGIEVIGICFKSYFFNE-----------ENAKRMTEQIG 51 Query: 67 IELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAA---EDLGADY 123 I+L ++F+ E++D V ++ G+ NP I C+ + ++ E AD+ Sbjct: 52 IKLEVIDFSEEHFDLVRN---PKHGWGKNMNPCIDCH-----SMMMNYSGKLLEKFNADF 103 Query: 124 IATGHYVRRADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPV 170 I TG + + + S+ + L+ K +S + + AQ+L P Sbjct: 104 IITGEVLNQRPM---SQNRQALNIVKKESGYSDKILRPLCAQNLNPT 147 >UniRef50_B5YF97 tRNA methyl transferase n=1 Tax=Dictyoglomus thermophilum H-6-12 RepID=B5YF97_DICT6 Length = 327 Score = 47.4 bits (111), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 39/141 (27%), Positives = 63/141 (44%), Gaps = 24/141 (17%) Query: 7 KVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYCTAAADLADAQAVCDKLG 66 + I +SGG+DS ++ WL+ QQG +V G+ + T +L + C+ L Sbjct: 5 RAISLISGGLDSILATWLILQQGIEVIGV-----------TFYTPFFNLELPKKACEFLN 53 Query: 67 IELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDL----GAD 122 I LH V+ EY + L + G+ NP I C+ F+ A++L AD Sbjct: 54 IPLHVVDITEEY---MAILKNPRFGYGKNMNPCIDCH------TFMVKKAKELLPKFDAD 104 Query: 123 YIATGHYVRRADVDGKSRLLR 143 +I TG + + + LR Sbjct: 105 FIITGEVLGERPMSQNKQSLR 125 >UniRef50_Q8PZP6 NH(3)-dependent NAD(+) synthetase n=3 Tax=Methanosarcina RepID=NADE_METMA Length = 256 Score = 47.4 bits (111), Expect = 9e-04, Method: Compositional matrix adjust. Identities = 55/200 (27%), Positives = 86/200 (43%), Gaps = 41/200 (20%) Query: 6 KKVIVGMSGGVDSSVSAWL-LQQQGY-QVEGLFMKNWEEDDGEEYCTAAADLADAQAVCD 63 K V+VG+SGG+DS+++A L ++ G +V G+ M E T A D DA+A+ D Sbjct: 24 KGVVVGISGGIDSALTATLAVKALGKDRVLGIHMP-------ESSLTPAVDSEDAEALAD 76 Query: 64 KLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFK---AFLEFAAEDLG 120 LGIE T++ + + F+A + + D L +K + + L F A L Sbjct: 77 WLGIEYRTIDISG-----IISAFMAAVP--ESESADRLTKGNLKARTRMSLLYFHANRLN 129 Query: 121 ADYIATGHYVRRADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQVRK 180 I TG NK + Y + L P+G L K V + Sbjct: 130 RMVIGTG--------------------NKTEILLGYYTKYGDGGVDLEPIGGLYKTGVWE 169 Query: 181 IAEDLGLVTA--KKKDSTGI 198 ++ LG+ + KK S G+ Sbjct: 170 LSSRLGIPESLITKKPSAGL 189 >UniRef50_Q12V31 NH(3)-dependent NAD(+) synthetase n=1 Tax=Methanococcoides burtonii DSM 6242 RepID=NADE_METBU Length = 263 Score = 46.6 bits (109), Expect = 0.001, Method: Compositional matrix adjust. Identities = 49/187 (26%), Positives = 82/187 (43%), Gaps = 46/187 (24%) Query: 9 IVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYCTAAADLADAQAVCDKLGIE 68 +VG+SGG+DS++ A+L VE L +N E T +++ DA V + LGI+ Sbjct: 27 VVGISGGIDSALVAYL------SVEALGAENVLGIHMPEASTPKSEIEDASKVAEALGID 80 Query: 69 LHTVNFAAEYWDNVFELFLAEYKAGRTPNPDI-----LCNKEIKFK---AFLEFAAEDLG 120 +N NV E++ RT PDI + +K + + L + A G Sbjct: 81 FKVINIT-----NVLEVY-------RTAMPDIDGASAHVDGNLKARIRMSMLYYYANMFG 128 Query: 121 ADYIATGHYVRRADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQVRK 180 + TG+ KS +L G Y + + P+G+L K +VR+ Sbjct: 129 RVVMGTGN---------KSEILLG-----------YFTKYGDGGVDIEPIGDLYKTEVRE 168 Query: 181 IAEDLGL 187 +++ LG+ Sbjct: 169 MSKMLGV 175 >UniRef50_B9LAC4 Thiamine biosynthesis protein:ExsB n=2 Tax=Nautiliaceae RepID=B9LAC4_NAUPA Length = 319 Score = 46.6 bits (109), Expect = 0.001, Method: Compositional matrix adjust. Identities = 31/97 (31%), Positives = 51/97 (52%), Gaps = 9/97 (9%) Query: 7 KVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYCTAAADLADAQAVCDKLG 66 K I SGG+DS+++ L+Q+Q ++EG+++ D G E T Q + D+LG Sbjct: 2 KAIALFSGGLDSALAIKLIQEQNIEIEGVYI-----DVGFE--TNKQKTEHLQKLADELG 54 Query: 67 IELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCN 103 I+L ++ +Y + LF Y G+ NP I C+ Sbjct: 55 IKLTVLDIKEQYIKEI--LFNPVYGYGKNMNPCIDCH 89 >UniRef50_Q8SW15 Putative uncharacterized protein ECU03_1240 n=2 Tax=Apansporoblastina RepID=Q8SW15_ENCCU Length = 317 Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust. Identities = 41/140 (29%), Positives = 66/140 (47%), Gaps = 30/140 (21%) Query: 1 MSETAKKVIVGMSGGVDSSVSAWLL----QQQGYQVEGLFMK------NWEEDDGEEYCT 50 M + ++ +G+SGG DS+V A++L ++ GY VE + + + + E C Sbjct: 44 MFQKGDRIGIGVSGGKDSTVLAYVLDLLNRKHGYGVELVLLSVDEGIVGYRDQSIESVCR 103 Query: 51 AAADLADAQAVCDKLGIELHTVNFAAEYWDNVFELFLAEY--KAGRTPNPDILCNKEIKF 108 + DL GI+L V+F ++VF + + K GR N C + Sbjct: 104 NSKDL----------GIKLRIVSF-----EDVFGVTMDRVVQKIGRRSNC-TYCG--VFR 145 Query: 109 KAFLEFAAEDLGADYIATGH 128 + LE AA ++G D IATGH Sbjct: 146 RQALEKAAREMGVDAIATGH 165 >UniRef50_Q09580 Probable GMP synthase [glutamine-hydrolyzing] n=4 Tax=Chromadorea RepID=GUAA_CAEEL Length = 792 Score = 44.3 bits (103), Expect = 0.006, Method: Compositional matrix adjust. Identities = 50/201 (24%), Positives = 91/201 (45%), Gaps = 38/201 (18%) Query: 6 KKVIVGMSGGVDSSVSAWLLQQ-------QGYQVEGLFMKNWEEDDGEEYCTAAADLADA 58 KKV+V +SGGVDS+V A LL++ ++ FM++ EE D E AA DL Sbjct: 320 KKVLVMVSGGVDSAVCAALLRRALGPNRVTAIHIDNGFMRH-EESDAVEKSLAALDLP-- 376 Query: 59 QAVCDKLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPD----ILCNKEIKFKAFLEF 114 +H NF + + E +P+ I+ N I+ K + Sbjct: 377 ----------IHRYNFGTTFRSSTEHCKDGEVALDECDDPEMKRKIIGNTFIRVK---DV 423 Query: 115 AAEDLGAD----YIATGHYVRRADVDGKSRLLRG----LDSNKDQSYFLYTLSHEQIAQS 166 +DL + ++A G +R ++ S L G + ++ + ++ + L ++ + Sbjct: 424 IMKDLNINHDEYFLAQG-TLRPDLIESASALASGHADTIKTHHNDTFLVREL--RKLGKV 480 Query: 167 LFPVGELEKPQVRKIAEDLGL 187 + P+ + K +VR++ +DLGL Sbjct: 481 VEPLKDFHKDEVRELGKDLGL 501 >UniRef50_C5VKF6 tRNA(Ile)-lysidine synthetase n=2 Tax=Prevotella RepID=C5VKF6_9BACT Length = 456 Score = 43.5 bits (101), Expect = 0.013, Method: Compositional matrix adjust. Identities = 28/125 (22%), Positives = 59/125 (47%), Gaps = 26/125 (20%) Query: 9 IVGMSGGVDSSVSAWLLQQQGYQVEGL----FMKNWEEDDGEEYCTAAADLADAQAVCDK 64 +V +SGG DS +++ GY+VE + ++ E E++C + +C + Sbjct: 22 LVALSGGADSVALLLCIKELGYRVEAVHCNFHLRGEESLRDEQFC---------EDLCQR 72 Query: 65 LGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGADYI 124 I LH V+F + + ++ ++ + + +E++++ F + E LGAD + Sbjct: 73 ENIPLHKVHFDTQAYADLHKVSIE------------MAARELRYRYFFQL-KEALGADGV 119 Query: 125 ATGHY 129 GH+ Sbjct: 120 CVGHH 124 >UniRef50_C0GTH3 tRNA(Ile)-lysidine synthetase n=1 Tax=Desulfonatronospira thiodismutans ASO3-1 RepID=C0GTH3_9DELT Length = 370 Score = 42.7 bits (99), Expect = 0.023, Method: Compositional matrix adjust. Identities = 47/146 (32%), Positives = 62/146 (42%), Gaps = 19/146 (13%) Query: 1 MSETAKKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEE--DDGEEYCTAAADLADA 58 +S KKV+ G SGG DS A L+ Y L MK D G A DLA Sbjct: 56 VSLKGKKVLAGFSGGPDS---AALVLAMHYLAPSLNMKLEAAYLDHGLRR-EAGEDLALV 111 Query: 59 QAVCDKLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAED 118 Q C +L ++LH NV L AGR + ++++ +L A Sbjct: 112 QDTCSQLSMKLHLGR------SNVSRL------AGRGRGGIEETARRLRYR-YLHGVARK 158 Query: 119 LGADYIATGHYVRRADVDGKSRLLRG 144 GADY+ TGH++ D RL RG Sbjct: 159 TGADYVLTGHHLNDLAEDILMRLQRG 184 >UniRef50_Q58873 CTU1/ATPBD3 family protein MJ1478 n=14 Tax=Euryarchaeota RepID=Y1478_METJA Length = 303 Score = 42.4 bits (98), Expect = 0.026, Method: Compositional matrix adjust. Identities = 25/74 (33%), Positives = 38/74 (51%), Gaps = 6/74 (8%) Query: 1 MSETAKKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYCTAAADLADAQA 60 M +K++V +SGG D +AW+L++ GY +E + E EE A +LA Sbjct: 47 MLSKDEKILVAVSGGKDGHAAAWVLKKLGYNIELFHINLGIEGFSEESLKAVKELA---- 102 Query: 61 VCDKLGIELHTVNF 74 +KL + LH VN Sbjct: 103 --EKLEVPLHVVNL 114 >UniRef50_A9A2U4 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase n=2 Tax=Thaumarchaeota RepID=A9A2U4_NITMS Length = 337 Score = 42.4 bits (98), Expect = 0.030, Method: Compositional matrix adjust. Identities = 48/189 (25%), Positives = 87/189 (46%), Gaps = 16/189 (8%) Query: 6 KKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEED-DGEEYCTAAADLADAQAVCDK 64 KKV+ +SGG+DS ++ ++Q+QG+ V + +K D D C + + D Sbjct: 8 KKVVALLSGGLDSQLAVRMMQEQGFDVSAVAIKTPFCDFDCGRGCG-----FEIRERADD 62 Query: 65 LGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGADYI 124 L + L TV EY + L ++ G NP I C + + F A + E++GA++I Sbjct: 63 LNVNLKTVYLGDEYIEM---LKNPKHGIGAGFNPCIDC-RAMMFDAAKKH-MEEIGAEFI 117 Query: 125 ATGHYVRRADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQVRKIAED 184 +G + + + LR ++ D L ++ +L P EK + K E+ Sbjct: 118 VSGEVLGQRPMSQHRPALRTIEKESD----LVGKIVRPLSAALLPETIPEKEGLIK-REN 172 Query: 185 LGLVTAKKK 193 LG++ + + Sbjct: 173 LGMIRGRTR 181 >UniRef50_A6T0B2 LPS biosynthesis protein WbpG n=4 Tax=Bacteria RepID=A6T0B2_JANMA Length = 382 Score = 42.0 bits (97), Expect = 0.037, Method: Compositional matrix adjust. Identities = 37/128 (28%), Positives = 55/128 (42%), Gaps = 16/128 (12%) Query: 9 IVGMSGGVDSSVSAWLLQQQGYQVEGLFMKN-WEEDDGEEYCTAAADLADAQAVCDKLGI 67 I+G+SGG DSS + G ++ + N W E + + +KLGI Sbjct: 72 IIGVSGGCDSSYLVHTMHAAGLRLLAVHFDNTWNSKVATE---------NIHNLLEKLGI 122 Query: 68 ELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGADYIATG 127 +L T+ + +D+++ FL KAG DI +I L AAE G Y+ G Sbjct: 123 DLFTIVVNNKEYDDIYRSFL---KAGVR---DIDSPTDIGLATTLYRAAEKFGVKYMIEG 176 Query: 128 HYVRRADV 135 H R V Sbjct: 177 HSFRTEGV 184 >UniRef50_A4YGU2 PP-loop domain protein n=3 Tax=Sulfolobaceae RepID=A4YGU2_METS5 Length = 318 Score = 41.6 bits (96), Expect = 0.042, Method: Compositional matrix adjust. Identities = 41/133 (30%), Positives = 68/133 (51%), Gaps = 16/133 (12%) Query: 1 MSETAKKVIVGMSGGVDSS----VSAWLLQQQGYQVEGLFMKNWEEDDGEEYCTAAADLA 56 M ++V V +SGG DS+ V A L + G++V G+ + + D G +Y + + + A Sbjct: 43 MIRGGERVAVAVSGGKDSTTLLHVLAKLSGKMGFEVVGINI-DLGIDRGTKYSSLSTEFA 101 Query: 57 DAQAVCDKLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAF-LEFA 115 +KLG+E V+ ++ + E A+ K R +C+ K + LE A Sbjct: 102 VKNF--EKLGVEYKVVSLKEKHGFTIDE---AKVKIKRP-----VCSTCGLVKRYVLEEA 151 Query: 116 AEDLGADYIATGH 128 A++LGAD +ATGH Sbjct: 152 AQELGADVLATGH 164 >UniRef50_B3T5L4 Putative uncharacterized protein n=2 Tax=environmental samples RepID=B3T5L4_9ARCH Length = 352 Score = 41.2 bits (95), Expect = 0.054, Method: Compositional matrix adjust. Identities = 36/120 (30%), Positives = 62/120 (51%), Gaps = 11/120 (9%) Query: 12 MSGGVDSSVSAWLLQQQGYQVEGLFMKNWEED-DGEEYCTAAADLADAQAVCDKLGIELH 70 +SGG+DS+++ +Q+QG++V + +K D D C + + D LG++L Sbjct: 29 LSGGLDSTLAVKTMQKQGFEVSAVAIKTPFCDFDCGRGCG-----FEIREKADNLGVDLK 83 Query: 71 TVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGADYIATGHYV 130 TV EY V L +Y G NP I C + + F+A + E++GA++I +G + Sbjct: 84 TVYLGDEY---VEMLKHPKYGFGSGMNPCIDC-RAMMFEAGKKH-MEEIGAEFIISGEVL 138 >UniRef50_A5G9E7 Thiamine biosynthesis protein n=4 Tax=Bacteria RepID=A5G9E7_GEOUR Length = 334 Score = 41.2 bits (95), Expect = 0.066, Method: Compositional matrix adjust. Identities = 37/142 (26%), Positives = 68/142 (47%), Gaps = 16/142 (11%) Query: 6 KKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYCTAAAD----LADAQAV 61 KK + +SGG+DS+++ ++ +QG VE L + +CT ++A V Sbjct: 3 KKALALLSGGLDSTLAVKVMLEQGIAVEALNFTS-------PFCTCTGKNSGCKSEAVRV 55 Query: 62 CDKLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGA 121 ++ I + ++ EY + V + ++ G+ NP I C + KA E+ AE GA Sbjct: 56 AEEFNIPIKVMHKGVEYLEIVGK---PKHGYGKGMNPCIDCRIFLLRKA-KEYMAES-GA 110 Query: 122 DYIATGHYVRRADVDGKSRLLR 143 D++ TG + + + + LR Sbjct: 111 DFVITGEVLGQRPMSQRRDTLR 132 >UniRef50_Q1MRB2 Predicted ATPase of the PP-loop superfamily implicated in cell cycle control n=1 Tax=Lawsonia intracellularis PHE/MN1-00 RepID=Q1MRB2_LAWIP Length = 341 Score = 40.8 bits (94), Expect = 0.084, Method: Compositional matrix adjust. Identities = 41/140 (29%), Positives = 57/140 (40%), Gaps = 25/140 (17%) Query: 8 VIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNW---EEDDGEEYCTAAADLADAQAVCDK 64 VIVG SGGVDS A +L G V M + E D + + A D + + + Sbjct: 40 VIVGCSGGVDSMALALILHCLGIDVVFAHMDHQLRAESKDDANHVKSFAAALDRRCIISR 99 Query: 65 LGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGADYI 124 + I A +Y + E T + C FLE ++ GA +I Sbjct: 100 VDIS----GLAIKYKKGIEE----------TARQERYC--------FLEQVRKEYGAQWI 137 Query: 125 ATGHYVRRADVDGKSRLLRG 144 ATGH++ D RLLRG Sbjct: 138 ATGHHLNDLSEDILLRLLRG 157 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_A1STI9 tRNA-specific 2-thiouridylase mnmA n=4 Tax=Prote... 571 e-161 UniRef50_D0X1F3 tRNA (5-methylaminomethyl-2-thiouridylate)-methy... 556 e-157 UniRef50_A6W0E1 tRNA-specific 2-thiouridylase mnmA n=20 Tax=Bact... 538 e-151 UniRef50_B1YTE9 tRNA-specific 2-thiouridylase mnmA n=310 Tax=cel... 522 e-147 UniRef50_Q4FSB4 tRNA-specific 2-thiouridylase mnmA n=635 Tax=Bac... 505 e-141 UniRef50_Q6MA75 tRNA-specific 2-thiouridylase mnmA n=15 Tax=Bact... 498 e-139 UniRef50_B0U6Q7 tRNA-specific 2-thiouridylase mnmA n=7 Tax=Xylel... 487 e-136 UniRef50_A2SLT0 tRNA-specific 2-thiouridylase mnmA n=1 Tax=Methy... 487 e-136 UniRef50_D1SR18 tRNA (5-methylaminomethyl-2-thiouridylate)-methy... 486 e-136 UniRef50_A5GE36 tRNA-specific 2-thiouridylase mnmA n=20 Tax=Bact... 485 e-135 UniRef50_C3ZAA6 Putative uncharacterized protein n=1 Tax=Branchi... 483 e-135 UniRef50_D2RN19 tRNA(5-methylaminomethyl-2-thiouridylate)-methyl... 482 e-135 UniRef50_B0K991 tRNA-specific 2-thiouridylase mnmA 2 n=9 Tax=Clo... 480 e-134 UniRef50_A1WWV9 tRNA-specific 2-thiouridylase mnmA n=2 Tax=Bacte... 479 e-134 UniRef50_C9KPU1 tRNA (5-methylaminomethyl-2-thiouridylate)-methy... 478 e-133 UniRef50_C0B5F7 Putative uncharacterized protein n=2 Tax=Lachnos... 476 e-133 UniRef50_Q253W3 tRNA-specific 2-thiouridylase mnmA n=3 Tax=Chlam... 476 e-133 UniRef50_A8DJE2 tRNA (5-methylaminomethyl-2-thiouridylate)-methy... 474 e-132 UniRef50_A6LSF2 tRNA-specific 2-thiouridylase mnmA n=19 Tax=Clos... 471 e-131 UniRef50_C0E8G4 Putative uncharacterized protein n=1 Tax=Clostri... 469 e-131 UniRef50_B0TFA7 tRNA-specific 2-thiouridylase mnmA n=97 Tax=Bact... 468 e-130 UniRef50_A5UV64 tRNA-specific 2-thiouridylase mnmA n=7 Tax=Bacte... 466 e-130 UniRef50_C0WCT5 Putative uncharacterized protein n=1 Tax=Acidami... 465 e-129 UniRef50_B5ZBP8 tRNA-specific 2-thiouridylase mnmA n=43 Tax=Bact... 463 e-129 UniRef50_C4ZB38 tRNA (5-methylaminomethyl-2-thiouridylate)-methy... 463 e-129 UniRef50_D0WIU4 tRNA (5-methylaminomethyl-2-thiouridylate)-methy... 460 e-128 UniRef50_O75648 Mitochondrial tRNA-specific 2-thiouridylase 1 n=... 457 e-127 UniRef50_Q1IPC9 tRNA-specific 2-thiouridylase mnmA n=2 Tax=Bacte... 456 e-127 UniRef50_UPI00016B2149 tRNA (5-methylaminomethyl-2-thiouridylate... 456 e-127 UniRef50_B5DNY9 GA22395 n=14 Tax=Neoptera RepID=B5DNY9_DROPS 455 e-126 UniRef50_A9SZR3 Predicted protein n=1 Tax=Physcomitrella patens ... 455 e-126 UniRef50_B7J5X6 tRNA-specific 2-thiouridylase mnmA n=3 Tax=Acidi... 454 e-126 UniRef50_Q503J2 Mitochondrial tRNA-specific 2-thiouridylase 1 n=... 452 e-126 UniRef50_Q3B625 tRNA-specific 2-thiouridylase mnmA n=10 Tax=Chlo... 449 e-125 UniRef50_C2KV29 tRNA (5-methylaminomethyl-2-thiouridylate)-methy... 448 e-124 UniRef50_A5FHA9 tRNA-specific 2-thiouridylase mnmA n=26 Tax=Bact... 447 e-124 UniRef50_B0MKE4 Putative uncharacterized protein n=3 Tax=Clostri... 447 e-124 UniRef50_B4D711 tRNA (5-methylaminomethyl-2-thiouridylate)-methy... 446 e-124 UniRef50_Q2LWA6 tRNA-specific 2-thiouridylase mnmA 1 n=1 Tax=Syn... 445 e-123 UniRef50_B5YCZ9 tRNA (5-methylaminomethyl-2-thiouridylate)-methy... 444 e-123 UniRef50_B7PXE7 tRNA (5-methylaminomethyl-2-thiouridylate)-methy... 444 e-123 UniRef50_D0LWB4 tRNA(5-methylaminomethyl-2-thiouridylate)-methyl... 443 e-123 UniRef50_B1VAX7 tRNA-specific 2-thiouridylase mnmA n=4 Tax=Bacte... 443 e-123 UniRef50_C1XSA6 tRNA (5-methylaminomethyl-2-thiouridylate)-methy... 441 e-122 UniRef50_C7N321 tRNA (5-methylaminomethyl-2-thiouridylate)-methy... 439 e-122 UniRef50_B1AJ41 tRNA-specific 2-thiouridylase mnmA n=13 Tax=Moll... 436 e-121 UniRef50_Q2RZN9 tRNA-specific 2-thiouridylase mnmA n=11 Tax=Bact... 436 e-121 UniRef50_C9LN41 tRNA (5-methylaminomethyl-2-thiouridylate)-methy... 434 e-120 UniRef50_B1ZZ32 tRNA-specific 2-thiouridylase mnmA n=3 Tax=Verru... 434 e-120 UniRef50_B0DQ81 Predicted protein n=4 Tax=Basidiomycota RepID=B0... 433 e-120 UniRef50_B3RIL6 Putative uncharacterized protein n=1 Tax=Trichop... 432 e-120 UniRef50_B3DUT9 tRNA(5-methylaminomethyl-2-thiouridine)-methyltr... 432 e-120 UniRef50_UPI000197B781 hypothetical protein BACCOPRO_02286 n=1 T... 432 e-120 UniRef50_Q057R1 tRNA-specific 2-thiouridylase mnmA n=6 Tax=Enter... 432 e-120 UniRef50_UPI00016C4B95 tRNA (5-methylaminomethyl-2-thiouridylate... 432 e-119 UniRef50_B8P9F0 Predicted protein n=1 Tax=Postia placenta Mad-69... 431 e-119 UniRef50_B9CP36 tRNA (5-methylaminomethyl-2-thiouridylate)-methy... 431 e-119 UniRef50_Q4A7U1 tRNA-specific 2-thiouridylase mnmA n=5 Tax=Molli... 429 e-119 UniRef50_D1BMF0 tRNA(5-methylaminomethyl-2-thiouridylate)-methyl... 429 e-119 UniRef50_A6KZ28 tRNA-specific 2-thiouridylase mnmA 2 n=10 Tax=Ba... 429 e-119 UniRef50_B2UPK4 tRNA-specific 2-thiouridylase mnmA n=1 Tax=Akker... 428 e-118 UniRef50_Q4SDW3 Chromosome undetermined SCAF14629, whole genome ... 428 e-118 UniRef50_Q9W5B6 Mitochondrial tRNA-specific 2-thiouridylase 1 n=... 428 e-118 UniRef50_D2MI59 tRNA (5-methylaminomethyl-2-thiouridylate)-methy... 427 e-118 UniRef50_A0LEL7 tRNA-specific 2-thiouridylase mnmA n=1 Tax=Syntr... 425 e-117 UniRef50_Q1J090 tRNA-specific 2-thiouridylase mnmA n=5 Tax=Deino... 425 e-117 UniRef50_A7HCV7 tRNA-specific 2-thiouridylase mnmA n=1 Tax=Anaer... 424 e-117 UniRef50_C5MCB7 Putative uncharacterized protein n=1 Tax=Candida... 424 e-117 UniRef50_B0SG84 tRNA-specific 2-thiouridylase mnmA n=6 Tax=Lepto... 424 e-117 UniRef50_D2QHY9 tRNA(5-methylaminomethyl-2-thiouridylate)-methyl... 423 e-117 UniRef50_Q73PV6 tRNA-specific 2-thiouridylase mnmA n=2 Tax=Trepo... 423 e-117 UniRef50_Q5PBB1 tRNA-specific 2-thiouridylase mnmA n=21 Tax=cell... 423 e-117 UniRef50_C9RAV2 tRNA (5-methylaminomethyl-2-thiouridylate)-methy... 421 e-116 UniRef50_A1BI85 tRNA-specific 2-thiouridylase mnmA n=2 Tax=Chlor... 421 e-116 UniRef50_B8FEQ6 tRNA (5-methylaminomethyl-2-thiouridylate)-methy... 420 e-116 UniRef50_C5CIB3 tRNA (5-methylaminomethyl-2-thiouridylate)-methy... 419 e-116 UniRef50_Q7TTZ4 tRNA-specific 2-thiouridylase mnmA n=2 Tax=Planc... 419 e-116 UniRef50_Q0F280 TRNA (5-methylaminomethyl-2-thiouridylate)-methy... 419 e-116 UniRef50_Q5L8X6 tRNA-specific 2-thiouridylase mnmA 3 n=6 Tax=Bac... 418 e-115 UniRef50_O13947 Mitochondrial tRNA-specific 2-thiouridylase 1 n=... 418 e-115 UniRef50_C1A7G2 tRNA-specific 2-thiouridylase MnmA n=1 Tax=Gemma... 417 e-115 UniRef50_Q1NYA2 TRNA (5-methylaminomethyl-2-thiouridylate)-methy... 415 e-114 UniRef50_Q6MLR7 tRNA-specific 2-thiouridylase mnmA n=1 Tax=Bdell... 415 e-114 UniRef50_B5YGH6 tRNA (5-methylaminomethyl-2-thiouridylate)-methy... 415 e-114 UniRef50_B2IBH3 tRNA-specific 2-thiouridylase mnmA n=141 Tax=roo... 414 e-114 UniRef50_A9EXM5 tRNA-specific 2-thiouridylase mnmA n=4 Tax=Myxoc... 414 e-114 UniRef50_C1ZEX9 tRNA (5-methylaminomethyl-2-thiouridylate)-methy... 413 e-114 UniRef50_Q3Z8D8 tRNA-specific 2-thiouridylase mnmA n=5 Tax=Dehal... 413 e-114 UniRef50_A8Z5W4 tRNA-specific 2-thiouridylase mnmA n=1 Tax=Candi... 413 e-114 UniRef50_A6KZV1 tRNA-specific 2-thiouridylase mnmA 3 n=23 Tax=Ba... 413 e-114 UniRef50_Q7NBZ0 tRNA-specific 2-thiouridylase mnmA n=6 Tax=cellu... 412 e-114 UniRef50_B1GZY9 tRNA-specific 2-thiouridylase mnmA n=2 Tax=Elusi... 412 e-113 UniRef50_UPI000069DE11 tRNA (5-methylaminomethyl-2-thiouridylate... 412 e-113 UniRef50_Q6C0F9 YALI0F25069p n=1 Tax=Yarrowia lipolytica RepID=Q... 412 e-113 UniRef50_UPI000180C35A PREDICTED: similar to tRNA 5-methylaminom... 411 e-113 UniRef50_B9WA49 tRNA (5-methylaminomethyl-2-thiouridylate)-methy... 411 e-113 UniRef50_B3JKC8 Putative uncharacterized protein n=2 Tax=Bactero... 411 e-113 UniRef50_C9RNM8 tRNA (5-methylaminomethyl-2-thiouridylate)-methy... 409 e-113 UniRef50_A8X0Z8 Putative uncharacterized protein n=2 Tax=Caenorh... 409 e-113 UniRef50_C0QRH5 tRNA-specific 2-thiouridylase mnmA n=8 Tax=Aquif... 409 e-113 UniRef50_B9GF12 Predicted protein n=6 Tax=Viridiplantae RepID=B9... 409 e-113 UniRef50_Q6BSZ3 DEHA2D04818p n=6 Tax=Saccharomycetales RepID=Q6B... 409 e-112 UniRef50_Q9SYD2 F11M15.16 protein n=14 Tax=Magnoliophyta RepID=Q... 408 e-112 UniRef50_Q17440 Probable mitochondrial tRNA-specific 2-thiouridy... 408 e-112 UniRef50_B7G8R2 Predicted protein (Fragment) n=1 Tax=Phaeodactyl... 408 e-112 UniRef50_Q5LIS5 tRNA-specific 2-thiouridylase mnmA 1 n=5 Tax=Bac... 406 e-112 UniRef50_D0ND99 tRNA-specific 2-thiouridylase mnmA, putative n=1... 406 e-112 UniRef50_B1I677 tRNA-specific 2-thiouridylase mnmA n=1 Tax=Candi... 405 e-111 UniRef50_B8CCP6 tRNA-methyltransferase (Fragment) n=1 Tax=Thalas... 404 e-111 UniRef50_Q8R5X3 tRNA-specific 2-thiouridylase mnmA 1 n=16 Tax=Fu... 404 e-111 UniRef50_C7MLV9 tRNA (5-methylaminomethyl-2-thiouridylate)-methy... 402 e-111 UniRef50_D2V0M5 Predicted protein n=1 Tax=Naegleria gruberi RepI... 402 e-111 UniRef50_Q0ARV1 tRNA-specific 2-thiouridylase mnmA n=67 Tax=Alph... 402 e-111 UniRef50_Q8A2F1 tRNA-specific 2-thiouridylase mnmA 2 n=8 Tax=Bac... 402 e-110 UniRef50_A2CB44 tRNA-specific 2-thiouridylase mnmA n=60 Tax=cell... 402 e-110 UniRef50_A5IJQ4 tRNA-specific 2-thiouridylase mnmA n=7 Tax=Therm... 401 e-110 UniRef50_Q1AWB1 tRNA-specific 2-thiouridylase mnmA n=1 Tax=Rubro... 399 e-110 UniRef50_C0QG63 tRNA (5-methylaminomethyl-2-thiouridylate)-methy... 398 e-109 UniRef50_A6LIF1 tRNA-specific 2-thiouridylase mnmA n=28 Tax=Bact... 397 e-109 UniRef50_D1N0N9 tRNA (5-methylaminomethyl-2-thiouridylate)-methy... 397 e-109 UniRef50_A8SJM7 Putative uncharacterized protein n=1 Tax=Parvimo... 396 e-109 UniRef50_Q0SMH1 tRNA-specific 2-thiouridylase mnmA n=25 Tax=Bact... 396 e-109 UniRef50_A9BIS3 tRNA-specific 2-thiouridylase mnmA n=1 Tax=Petro... 396 e-109 UniRef50_A9A0S9 tRNA-specific 2-thiouridylase mnmA n=1 Tax=Desul... 396 e-108 UniRef50_C8W7A2 tRNA(5-methylaminomethyl-2-thiouridylate)-methyl... 395 e-108 UniRef50_P75365 tRNA-specific 2-thiouridylase mnmA n=2 Tax=Mycop... 394 e-108 UniRef50_C8WLL2 tRNA(5-methylaminomethyl-2-thiouridylate)-methyl... 394 e-108 UniRef50_A4SBE4 Predicted protein n=2 Tax=Ostreococcus RepID=A4S... 394 e-108 UniRef50_C4F7E5 Putative uncharacterized protein n=2 Tax=Collins... 394 e-108 UniRef50_C4QX90 tRNA-specific 2-thiouridylase, responsible for 2... 393 e-108 UniRef50_D1PXB9 tRNA (5-methylaminomethyl-2-thiouridylate)-methy... 393 e-108 UniRef50_Q6AIZ6 tRNA-specific 2-thiouridylase mnmA n=1 Tax=Desul... 392 e-107 UniRef50_A6Q239 tRNA-specific 2-thiouridylase mnmA n=2 Tax=Epsil... 392 e-107 UniRef50_C9RQ01 tRNA (5-methylaminomethyl-2-thiouridylate)-methy... 392 e-107 UniRef50_B9L801 tRNA (5-methylaminomethyl-2-thiouridylate)-methy... 391 e-107 UniRef50_Q12093 Mitochondrial tRNA-specific 2-thiouridylase 1 n=... 389 e-107 UniRef50_C3J919 tRNA (5-methylaminomethyl-2-thiouridylate)-methy... 385 e-105 UniRef50_C7NES3 tRNA(5-methylaminomethyl-2-thiouridylate)-methyl... 384 e-105 UniRef50_D1XXK1 tRNA (5-methylaminomethyl-2-thiouridylate)-methy... 384 e-105 UniRef50_B2RHP0 tRNA-specific 2-thiouridylase mnmA n=5 Tax=Bacte... 383 e-105 UniRef50_B7AL92 Putative uncharacterized protein n=3 Tax=Bactero... 382 e-105 UniRef50_A8F5H8 tRNA-specific 2-thiouridylase mnmA n=3 Tax=Therm... 382 e-104 UniRef50_C9L0F1 tRNA (5-methylaminomethyl-2-thiouridylate)-methy... 381 e-104 UniRef50_B0VEY5 tRNA (5-methylaminomethyl-2-thiouridylate)-methy... 379 e-104 UniRef50_C5DEF9 KLTH0C08844p n=2 Tax=Saccharomycetaceae RepID=C5... 378 e-103 UniRef50_A5FZD5 tRNA-specific 2-thiouridylase mnmA n=2 Tax=Prote... 376 e-103 UniRef50_D1BVV4 tRNA(5-methylaminomethyl-2-thiouridylate)-methyl... 375 e-102 UniRef50_A8ES35 tRNA-specific 2-thiouridylase mnmA 1 n=5 Tax=Eps... 374 e-102 UniRef50_B5Y9X9 tRNA (5-methylaminomethyl-2-thiouridylate)-methy... 373 e-102 UniRef50_A7ANM3 tRNA methyl transferase family protein n=1 Tax=B... 372 e-102 UniRef50_Q2LVR6 tRNA-specific 2-thiouridylase mnmA 2 n=1 Tax=Syn... 372 e-101 UniRef50_B1VZW7 tRNA-specific 2-thiouridylase mnmA n=44 Tax=Acti... 371 e-101 UniRef50_Q5K850 tRNA (5-methylaminomethyl-2-thiouridylate)-methy... 369 e-101 UniRef50_C0QYI3 tRNA (5-methylaminomethyl-2-thiouridylate)-methy... 369 e-100 UniRef50_A6NQI9 Putative uncharacterized protein n=1 Tax=Bactero... 369 e-100 UniRef50_D1PL47 tRNA (5-methylaminomethyl-2-thiouridylate)-methy... 368 e-100 UniRef50_Q9ZJQ0 tRNA-specific 2-thiouridylase mnmA n=22 Tax=Camp... 367 e-100 UniRef50_Q54I63 Mitochondrial tRNA-specific 2-thiouridylase 1 n=... 365 2e-99 UniRef50_D2NS67 Predicted tRNA methyltransferase n=4 Tax=Actinom... 364 3e-99 UniRef50_B8LDI7 Predicted protein (Fragment) n=1 Tax=Thalassiosi... 363 6e-99 UniRef50_Q7U320 tRNA-specific 2-thiouridylase mnmA n=3 Tax=Helic... 362 1e-98 UniRef50_A5E201 Putative uncharacterized protein n=1 Tax=Loddero... 361 3e-98 UniRef50_B9L0K7 tRNA methyl transferase n=2 Tax=Thermomicrobia (... 360 5e-98 UniRef50_C7LUQ7 tRNA(5-methylaminomethyl-2-thiouridylate)-methyl... 360 5e-98 UniRef50_B1VFZ9 tRNA-specific 2-thiouridylase mnmA n=65 Tax=Bact... 359 9e-98 UniRef50_C7GYK6 tRNA (5-methylaminomethyl-2-thiouridylate)-methy... 359 1e-97 UniRef50_B2GL48 tRNA-specific 2-thiouridylase mnmA n=6 Tax=Micro... 356 6e-97 UniRef50_C7QYX8 tRNA (5-methylaminomethyl-2-thiouridylate)-methy... 356 8e-97 UniRef50_Q313S6 tRNA-specific 2-thiouridylase mnmA n=7 Tax=Desul... 355 1e-96 UniRef50_C0GTF7 tRNA (5-methylaminomethyl-2-thiouridylate)-methy... 355 2e-96 UniRef50_A7ZEK1 tRNA-specific 2-thiouridylase mnmA n=4 Tax=Campy... 354 4e-96 UniRef50_A7I2L9 tRNA-specific 2-thiouridylase mnmA n=19 Tax=Camp... 352 1e-95 UniRef50_Q8R5Z5 tRNA-specific 2-thiouridylase mnmA 2 n=12 Tax=Fu... 352 1e-95 UniRef50_B7G4M7 Predicted protein (Fragment) n=1 Tax=Phaeodactyl... 349 1e-94 UniRef50_C1EG18 Predicted protein (Fragment) n=2 Tax=Micromonas ... 348 2e-94 UniRef50_Q1MRW7 tRNA-specific 2-thiouridylase mnmA n=1 Tax=Lawso... 348 2e-94 UniRef50_C9M7Q8 tRNA (5-methylaminomethyl-2-thiouridylate)-methy... 348 2e-94 UniRef50_D2L5P8 tRNA (5-methylaminomethyl-2-thiouridylate)-methy... 345 1e-93 UniRef50_UPI0001C3185B tRNA(5-methylaminomethyl-2-thiouridylate)... 345 2e-93 UniRef50_B6WY81 Putative uncharacterized protein n=1 Tax=Desulfo... 345 2e-93 UniRef50_C1FJ72 Predicted protein n=1 Tax=Micromonas sp. RCC299 ... 344 4e-93 UniRef50_C0A9P4 tRNA (5-methylaminomethyl-2-thiouridylate)-methy... 342 1e-92 UniRef50_C1TMD1 Predicted tRNA(5-methylaminomethyl-2-thiouridyla... 342 2e-92 UniRef50_D1B719 tRNA(5-methylaminomethyl-2-thiouridylate)-methyl... 341 2e-92 UniRef50_C6BSG5 tRNA (5-methylaminomethyl-2-thiouridylate)-methy... 339 7e-92 UniRef50_B6JVF0 tRNA (5-methylaminomethyl-2-thiouridylate)-methy... 337 3e-91 UniRef50_D1Y320 tRNA methyl transferase n=1 Tax=Pyramidobacter p... 337 3e-91 UniRef50_UPI0001BC5A6B tRNA (5-methylaminomethyl-2-thiouridylate... 337 3e-91 UniRef50_C2BUX5 tRNA (5-methylaminomethyl-2-thiouridylate)-methy... 337 3e-91 UniRef50_A9V8Y1 Predicted protein n=1 Tax=Monosiga brevicollis R... 337 5e-91 UniRef50_C7M0G9 tRNA(5-methylaminomethyl-2-thiouridylate)-methyl... 332 2e-89 UniRef50_Q3DBK5 TRNA methyl transferase (Fragment) n=5 Tax=cellu... 327 3e-88 UniRef50_C6HVS1 tRNA (5-methylaminomethyl-2-thiouridylate)-methy... 320 4e-86 UniRef50_A8NDW7 Putative uncharacterized protein n=1 Tax=Coprino... 319 1e-85 UniRef50_B0MXW7 Putative uncharacterized protein n=1 Tax=Alistip... 318 2e-85 UniRef50_Q4UE41 Trna methyl transferase, putative n=2 Tax=Theile... 314 4e-84 UniRef50_C4QP81 tRNA(5-methylaminomethyl-2-thiouridylate)-methy ... 311 3e-83 UniRef50_B6AN65 tRNA (5-methylaminomethyl-2-thiouridylate)-methy... 299 1e-79 UniRef50_B8IYA5 tRNA (5-methylaminomethyl-2-thiouridylate)-methy... 298 2e-79 UniRef50_B6KA02 tRNA methyltransferase domain-containing protein... 251 4e-65 UniRef50_C7LK58 tRNA (5-methylaminomethyl-2-thiouridylate)-methy... 245 2e-63 UniRef50_A6BB58 3-oxoacyl-[acyl-carrier-protein] synthase 1 (Fra... 232 2e-59 UniRef50_C9ZUV8 tRNA-methyl transferase, putative n=2 Tax=Trypan... 213 1e-53 UniRef50_Q4QIT1 TRNA-methyl transferase, putative n=4 Tax=Leishm... 211 3e-53 UniRef50_C1SG68 Predicted tRNA(5-methylaminomethyl-2-thiouridyla... 199 1e-49 UniRef50_Q7X189 Lfe204p1 (Fragment) n=1 Tax=Leptospirillum ferro... 198 3e-49 UniRef50_C1SG69 Predicted tRNA(5-methylaminomethyl-2-thiouridyla... 194 5e-48 UniRef50_Q5DCM7 SJCHGC00881 protein n=2 Tax=Schistosoma japonicu... 180 8e-44 UniRef50_A5KCE1 tRNA methyl transferase, putative n=1 Tax=Plasmo... 178 4e-43 UniRef50_B3L1V6 tRNA methyl transferase, putative n=1 Tax=Plasmo... 174 3e-42 UniRef50_Q4Y1X1 Putative uncharacterized protein (Fragment) n=1 ... 169 1e-40 UniRef50_UPI000197A71F tRNA-specific 2-thiouridylase MnmA n=1 Ta... 133 8e-30 UniRef50_C7H4N6 tRNA (5-methylaminomethyl-2-thiouridylate)-methy... 129 1e-28 UniRef50_B3SFT2 Putative uncharacterized protein (Fragment) n=1 ... 126 1e-27 UniRef50_C7R8C6 tRNA(5-methylaminomethyl-2-thiouridylate)-methyl... 121 5e-26 UniRef50_Q8IJK4 tRNA methyltransferase, putative n=1 Tax=Plasmod... 119 1e-25 UniRef50_B2TJM2 Argininosuccinate synthase n=30 Tax=Bacteria Rep... 116 2e-24 UniRef50_Q8PZP6 NH(3)-dependent NAD(+) synthetase n=3 Tax=Methan... 108 4e-22 UniRef50_Q12V31 NH(3)-dependent NAD(+) synthetase n=1 Tax=Methan... 105 3e-21 UniRef50_A1AMX6 Thiamine biosynthesis protein n=4 Tax=Desulfurom... 104 4e-21 UniRef50_B5YF97 tRNA methyl transferase n=1 Tax=Dictyoglomus the... 103 1e-20 UniRef50_A8AAD7 PP-loop domain protein n=1 Tax=Ignicoccus hospit... 102 3e-20 UniRef50_B9LAC4 Thiamine biosynthesis protein:ExsB n=2 Tax=Nauti... 96 2e-18 UniRef50_C3XFA5 tRNA methyltransferase n=1 Tax=Helicobacter bili... 90 1e-16 UniRef50_C9MRP4 tRNA(Ile)-lysidine synthase n=1 Tax=Prevotella v... 88 6e-16 Sequences not found previously or not previously below threshold: UniRef50_UPI0001902279 tRNA (5-methylaminomethyl-2-thiouridylate... 121 3e-26 UniRef50_A0LCE2 Putative uncharacterized protein n=1 Tax=Magneto... 103 1e-20 UniRef50_Q0AXT2 Putative uncharacterized protein n=1 Tax=Syntrop... 97 9e-19 UniRef50_C9R7K7 Thiamine biosynthesis protein-like protein n=1 T... 94 5e-18 UniRef50_Q3AD57 Putative uncharacterized protein n=1 Tax=Carboxy... 93 2e-17 UniRef50_A5TXN2 tRNA (5-methylaminomethyl-2-thiouridylate)-methy... 91 9e-17 UniRef50_Q1K1V6 Thiamine biosynthesis protein n=2 Tax=Desulfurom... 89 3e-16 UniRef50_Q1CVE2 Argininosuccinate synthase n=14 Tax=Helicobacter... 88 4e-16 UniRef50_Q2LUM8 Putative tRNA (5-methylaminomethyl-2-thiouridyla... 88 6e-16 UniRef50_Q7M837 TRNA METHYLTRANSFERASE n=6 Tax=Helicobacteraceae... 88 8e-16 UniRef50_A9A2U4 tRNA (5-methylaminomethyl-2-thiouridylate)-methy... 85 3e-15 UniRef50_A5G9E7 Thiamine biosynthesis protein n=4 Tax=Bacteria R... 85 4e-15 UniRef50_B2VAD6 Thiamine biosynthesis protein n=6 Tax=Aquificale... 85 5e-15 UniRef50_A2BJ08 Predicted ATPase of the PP-loop superfamily n=1 ... 85 5e-15 UniRef50_Q0W737 NH(3)-dependent NAD(+) synthetase n=2 Tax=Euryar... 84 6e-15 UniRef50_O27554 Probable NH(3)-dependent NAD(+) synthetase n=5 T... 84 7e-15 UniRef50_D1JEE7 Probable NH(3)-dependent NAD(+) synthetase n=1 T... 84 8e-15 UniRef50_A3DP41 NH(3)-dependent NAD(+) synthetase n=2 Tax=Archae... 83 1e-14 UniRef50_C5A5U2 Predicted ATPase of the PP-loop superfamily n=8 ... 83 2e-14 UniRef50_B8D6R2 NAD+ synthetase n=1 Tax=Desulfurococcus kamchatk... 82 3e-14 UniRef50_C0R008 Thiamine biosynthesis protein n=2 Tax=Brachyspir... 82 3e-14 UniRef50_B8CZD2 NH(3)-dependent NAD(+) synthetase n=4 Tax=Clostr... 81 6e-14 UniRef50_A6UUS4 NH(3)-dependent NAD(+) synthetase n=12 Tax=Metha... 81 8e-14 UniRef50_A8ACB5 NH(3)-dependent NAD(+) synthetase n=1 Tax=Ignico... 81 8e-14 UniRef50_B5Y727 Conserved protein n=1 Tax=Coprothermobacter prot... 81 8e-14 >UniRef50_A1STI9 tRNA-specific 2-thiouridylase mnmA n=4 Tax=Proteobacteria RepID=MNMA_PSYIN Length = 367 Score = 571 bits (1473), Expect = e-161, Method: Composition-based stats. Identities = 278/365 (76%), Positives = 310/365 (84%), Gaps = 1/365 (0%) Query: 1 MSETAK-KVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYCTAAADLADAQ 59 M++ ++ KVIVGMSGGVDSSVSA+LLQQQGY VEGLFMKNWEEDD ++YC AA DL DAQ Sbjct: 1 MTDNSQVKVIVGMSGGVDSSVSAYLLQQQGYLVEGLFMKNWEEDDTDQYCAAAQDLEDAQ 60 Query: 60 AVCDKLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDL 119 +VCDKLGI LHT+NFAAEYWDNVFE FLAEYKAGRTPNPDI+CNKEIKFKAFLEFAAEDL Sbjct: 61 SVCDKLGIPLHTINFAAEYWDNVFEHFLAEYKAGRTPNPDIMCNKEIKFKAFLEFAAEDL 120 Query: 120 GADYIATGHYVRRADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQVR 179 GADYIATGHYVRR +VDG +LLRGLD+NKDQSYFLY + +QIA+SLFPVGELEKP+VR Sbjct: 121 GADYIATGHYVRRREVDGHVQLLRGLDNNKDQSYFLYAIGEKQIAKSLFPVGELEKPEVR 180 Query: 180 KIAEDLGLVTAKKKDSTGICFIGERKFREFLGRYLPAQPGKIITVDGDEIGEHQGLMYHT 239 +IAE L+T KKDSTGICFIGERKF +FL YLPAQPG I+T G+ IG+HQGLMYHT Sbjct: 181 RIAEQQDLITHNKKDSTGICFIGERKFTDFLQEYLPAQPGDIVTPTGEVIGQHQGLMYHT 240 Query: 240 LGQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLHWVDREP 299 LGQRKGLGIGG + E PWYVV KD++NN L+VAQG +HP L S GLIA+Q WVDR P Sbjct: 241 LGQRKGLGIGGLQNSNENPWYVVGKDMDNNRLLVAQGADHPALFSYGLIAKQCDWVDRTP 300 Query: 300 FTGTMRCTVKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTPGQSAVFYNGEVCLGGGI 359 T RCTVKTRYRQ DIPCTV LDDD ++VIFD AAVTPGQSAVFYN EVCLGG I Sbjct: 301 KKSTFRCTVKTRYRQQDIPCTVTPLDDDTLKVIFDTAQAAVTPGQSAVFYNDEVCLGGAI 360 Query: 360 IEQRL 364 IE+ L Sbjct: 361 IEEHL 365 >UniRef50_D0X1F3 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase n=1 Tax=Vibrio alginolyticus 40B RepID=D0X1F3_VIBAL Length = 430 Score = 556 bits (1434), Expect = e-157, Method: Composition-based stats. Identities = 285/369 (77%), Positives = 319/369 (86%), Gaps = 5/369 (1%) Query: 1 MSE-TAKKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYCTAAADLADAQ 59 MS+ + KKVIVGMSGGVDSSVSA+LL+QQGYQVEGLFMKNWEEDD EEYCTAA DLADAQ Sbjct: 57 MSDNSQKKVIVGMSGGVDSSVSAYLLKQQGYQVEGLFMKNWEEDDNEEYCTAAEDLADAQ 116 Query: 60 AVCDKLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDL 119 AVCDKLGI LHT+NFAAEYWDNVFE FLAEYKAGRTPNPDILCNKEIKFKAFLEFA E L Sbjct: 117 AVCDKLGIHLHTINFAAEYWDNVFEYFLAEYKAGRTPNPDILCNKEIKFKAFLEFADEVL 176 Query: 120 GADYIATGHYVRRA--DVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQ 177 ADYIA GHYVRR+ + K ++LRGLD NKDQSYFLYTLS+EQIA+SLFPVG+LEKP+ Sbjct: 177 DADYIAMGHYVRRSFPENGEKPQMLRGLDGNKDQSYFLYTLSNEQIARSLFPVGDLEKPE 236 Query: 178 VRKIAEDLGLVTAKKKDSTGICFIGERKFREFLGRYLPAQPGKIITVDGDEIGEHQGLMY 237 VR+IAE+ L+TAKKKDSTGICFIGERKF EFLGRYLPAQPG I T +G+ IG+HQGLMY Sbjct: 237 VRRIAEEQDLITAKKKDSTGICFIGERKFTEFLGRYLPAQPGNIETPEGEVIGQHQGLMY 296 Query: 238 HTLGQRKGLGIGGTKEGT--EEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLHWV 295 HTLGQRKGL IGG K G E+PW+V +KD+E N+L+ QG +HP L S GL+A QLHWV Sbjct: 297 HTLGQRKGLHIGGRKGGGGNEDPWFVGEKDLERNVLIAVQGKDHPMLKSEGLLASQLHWV 356 Query: 296 DREPFTGTMRCTVKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTPGQSAVFYNGEVCL 355 DREP M+CTVKTRYRQ DIPCT+ +DD+ I+VIFDEP AVTPGQSAVFY G+VCL Sbjct: 357 DREPIRDVMKCTVKTRYRQEDIPCTIIPIDDENIKVIFDEPQIAVTPGQSAVFYKGDVCL 416 Query: 356 GGGIIEQRL 364 GGGIIEQR+ Sbjct: 417 GGGIIEQRI 425 >UniRef50_A6W0E1 tRNA-specific 2-thiouridylase mnmA n=20 Tax=Bacteria RepID=MNMA_MARMS Length = 390 Score = 538 bits (1386), Expect = e-151, Method: Composition-based stats. Identities = 245/355 (69%), Positives = 287/355 (80%), Gaps = 1/355 (0%) Query: 6 KKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYCTAAADLADAQAVCDKL 65 KKVIVGMSGGVDSSVSA +L QQGYQVEGLFMKNW+EDDG EYCTA DLADAQAV DKL Sbjct: 31 KKVIVGMSGGVDSSVSALILMQQGYQVEGLFMKNWDEDDGTEYCTAKDDLADAQAVSDKL 90 Query: 66 GIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGADYIA 125 GI+LHT NFA+EYWDNVFE FLAEYKAGRTPNPDILCNKEIKFKAFLE+A L ADYIA Sbjct: 91 GIKLHTANFASEYWDNVFEHFLAEYKAGRTPNPDILCNKEIKFKAFLEYAM-ALNADYIA 149 Query: 126 TGHYVRRADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQVRKIAEDL 185 TGHYVRR + +G+ LL+GLD NKDQSYFLY + ++IA++LFPVGELEK +VR++AE+ Sbjct: 150 TGHYVRRGEKNGEPLLLKGLDGNKDQSYFLYAVGKDEIAKTLFPVGELEKTEVRRLAEEF 209 Query: 186 GLVTAKKKDSTGICFIGERKFREFLGRYLPAQPGKIITVDGDEIGEHQGLMYHTLGQRKG 245 GL+T KKDSTGICFIGER+F++FL +YLPAQPG I T++GD+I H GLMYHT+GQR+G Sbjct: 210 GLITHNKKDSTGICFIGERRFKDFLEQYLPAQPGDIETLEGDKIARHHGLMYHTIGQRQG 269 Query: 246 LGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLHWVDREPFTGTMR 305 LGIGG + +++PWYVV+KD+E N+L+V QG +H L LIA WV RE T + Sbjct: 270 LGIGGLAKYSDDPWYVVEKDLERNVLIVTQGGQHESLFKTHLIADNFDWVAREKPTFPLT 329 Query: 306 CTVKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTPGQSAVFYNGEVCLGGGII 360 C K RYRQ+D CT+ L D R+EV F EP AVTPGQS VFY +VCLGGGII Sbjct: 330 CKAKCRYRQSDQECTINELADGRVEVSFVEPQRAVTPGQSVVFYVDDVCLGGGII 384 >UniRef50_B1YTE9 tRNA-specific 2-thiouridylase mnmA n=310 Tax=cellular organisms RepID=MNMA_BURA4 Length = 389 Score = 522 bits (1346), Expect = e-147, Method: Composition-based stats. Identities = 208/363 (57%), Positives = 262/363 (72%), Gaps = 6/363 (1%) Query: 4 TAKKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYCTAAADLADAQAVCD 63 T ++V+VGMSGGVDSSV+AWLL++QGY V GLFMKNWE+DD EYC+ D D +V D Sbjct: 2 TKRRVVVGMSGGVDSSVTAWLLKEQGYDVVGLFMKNWEDDDDGEYCSTRQDWIDVVSVAD 61 Query: 64 KLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGADY 123 +GI++ VNFAAEY D VF FL EY AGRTPNPD+LCN EIKFKAFL+ A L A+ Sbjct: 62 LIGIDVEAVNFAAEYKDRVFAEFLREYSAGRTPNPDVLCNAEIKFKAFLDHAM-SLDAEM 120 Query: 124 IATGHYVRRADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQVRKIAE 183 IATGHY R + DG+ LL+ D KDQSYFL+ L+ Q+++++FP+GE+ K +VR+IA Sbjct: 121 IATGHYARVRERDGRFELLKAFDHTKDQSYFLHRLNQAQLSKTMFPLGEIPKTKVREIAA 180 Query: 184 DLGLVTAKKKDSTGICFIGERKFREFLGRYLPAQPGKIITVDGDEIGEHQGLMYHTLGQR 243 +GL AKKKDSTGICFIGER FR+FL RYLP +PG + T DG IGEH GL ++T GQR Sbjct: 181 QIGLPNAKKKDSTGICFIGERPFRDFLNRYLPTKPGPMKTPDGKVIGEHIGLAFYTFGQR 240 Query: 244 KGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLHWVDREPFTGT 303 KG+G+GG+K+G+ EPW+V KD+ +N L V QGH+HP L+S L+A + WV EP Sbjct: 241 KGIGLGGSKDGSGEPWFVAAKDIASNTLYVVQGHDHPWLLSRQLVAGNVSWVAGEPPADG 300 Query: 304 MRCTVKTRYRQTDIPCT-----VKALDDDRIEVIFDEPVAAVTPGQSAVFYNGEVCLGGG 358 C KTRYRQ D C+ + D +R + FD+ AVTPGQSAV Y+GE+CLGGG Sbjct: 301 FSCGAKTRYRQADAACSFGRPALGRADGERFSLTFDDAQWAVTPGQSAVLYDGEICLGGG 360 Query: 359 IIE 361 IIE Sbjct: 361 IIE 363 >UniRef50_Q4FSB4 tRNA-specific 2-thiouridylase mnmA n=635 Tax=Bacteria RepID=MNMA_PSYA2 Length = 408 Score = 505 bits (1301), Expect = e-141, Method: Composition-based stats. Identities = 248/372 (66%), Positives = 291/372 (78%), Gaps = 14/372 (3%) Query: 2 SETAKKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYCTAAADLADAQAV 61 + + K VIVGMSGGVDSSVSA LLQQ G+ VEGLFMKNWEEDDG EYCTA DLADAQAV Sbjct: 29 NPSTKHVIVGMSGGVDSSVSAVLLQQAGFVVEGLFMKNWEEDDGTEYCTAMDDLADAQAV 88 Query: 62 CDKLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGA 121 CDK+GI+LHT NFA EYWD VFE FLAEYKAGRTPNPDILCNKEIKFKAFL++A LGA Sbjct: 89 CDKIGIKLHTANFAMEYWDRVFEHFLAEYKAGRTPNPDILCNKEIKFKAFLDYAL-TLGA 147 Query: 122 DYIATGHYVRRA----DVDG--KSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEK 175 DYIATGHY RR+ + DG ++LLRGLD+NKDQSYFL+ + +++A++LFPVGELEK Sbjct: 148 DYIATGHYTRRSVNYKNNDGIEVAQLLRGLDNNKDQSYFLHAVGGDKLAKTLFPVGELEK 207 Query: 176 PQVRKIAEDLGLVTAKKKDSTGICFIGERKFREFLGRYLPAQPGKIITVDGDEIGEHQGL 235 P VR+IAE+ L+TA KKDSTGICFIGER+F++FL +YLPAQ G I+T DG IG H GL Sbjct: 208 PVVRQIAEEHDLITANKKDSTGICFIGERRFKDFLQQYLPAQKGDIVTDDGINIGTHDGL 267 Query: 236 MYHTLGQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLHWV 295 MY+TLGQR G+GIGG K+ EEPW+V+ KD++NN L+V QGHEHP ++S L A +L W Sbjct: 268 MYYTLGQRGGIGIGGVKDRPEEPWFVLAKDLDNNRLIVGQGHEHPMMLSNELHAYKLDWT 327 Query: 296 DREPFT-----GTMRCTVKTRYRQTDIPCTVKAL--DDDRIEVIFDEPVAAVTPGQSAVF 348 D P T +RC K+RYRQ D C V A+ D + VIFDEP AVTPGQSAVF Sbjct: 328 DGLPPTDIFSLEGLRCMAKSRYRQPDQACRVFAVNADGSEVRVIFDEPQRAVTPGQSAVF 387 Query: 349 YNGEVCLGGGII 360 Y EVCLGGG+I Sbjct: 388 YIEEVCLGGGVI 399 >UniRef50_Q6MA75 tRNA-specific 2-thiouridylase mnmA n=15 Tax=Bacteria RepID=MNMA_PARUW Length = 376 Score = 498 bits (1282), Expect = e-139, Method: Composition-based stats. Identities = 200/366 (54%), Positives = 243/366 (66%), Gaps = 7/366 (1%) Query: 2 SETAKKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYCTAAADLADAQAV 61 + K V+VGMSGGVDSSVSA L+++QGY V GLFMKNWEE D C++A D D + V Sbjct: 1 MKNQKTVVVGMSGGVDSSVSALLMKEQGYNVIGLFMKNWEEKDENGVCSSAQDYDDVRRV 60 Query: 62 CDKLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGA 121 CD + I + VNF Y VF F+A+++ G TPNPDILCN+EIKFK FLE A E LGA Sbjct: 61 CDHINIPYYAVNFVENYRKQVFTQFIADFQKGWTPNPDILCNREIKFKVFLEKALE-LGA 119 Query: 122 DYIATGHYVRRADVD-GKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQVRK 180 D++ATGHY + +D G L++G+D NKDQ+YFLYTL+ + + Q LFPVG LEK QVR Sbjct: 120 DFLATGHYCQNLILDKGSPSLVKGIDHNKDQTYFLYTLNQQILQQVLFPVGGLEKSQVRD 179 Query: 181 IAEDLGLVTAKKKDSTGICFIGERKFREFLGRYLPAQPGKIITVDGDEIGEHQGLMYHTL 240 IA LVTA+KKDSTGICFIGER FR FL +Y+ QPG T+ G +G+H G Y+TL Sbjct: 180 IARKHQLVTAEKKDSTGICFIGERDFRSFLSQYVAIQPGAFQTLQGKNVGKHMGTAYYTL 239 Query: 241 GQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLHWVDREPF 300 GQRKGLGIG G E W+VV KD E I+ V QG HP L LIA L WV P Sbjct: 240 GQRKGLGIG----GAGEAWFVVGKDHERGIVFVEQGANHPALYCDELIATDLSWVAEAPL 295 Query: 301 TGTMRCTVKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTPGQSAVFYNGEVCLGGGII 360 C K RYRQ D CT+ +++ + V FD P AVTPGQS VFY G +CLGGG+I Sbjct: 296 L-PYTCQSKVRYRQNDQFCTIHRIENGKAFVTFDRPQRAVTPGQSIVFYVGNICLGGGVI 354 Query: 361 EQRLPL 366 +Q P Sbjct: 355 QQPGPT 360 >UniRef50_B0U6Q7 tRNA-specific 2-thiouridylase mnmA n=7 Tax=Xylella fastidiosa RepID=MNMA_XYLFM Length = 379 Score = 487 bits (1255), Expect = e-136, Method: Composition-based stats. Identities = 195/354 (55%), Positives = 232/354 (65%), Gaps = 2/354 (0%) Query: 7 KVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYCTAAADLADAQAVCDKLG 66 ++IV MSGGVDSSV+AW L Q + GLFM+NW DDG C A D DA AVC LG Sbjct: 5 RIIVAMSGGVDSSVAAWRLNSQREAIAGLFMRNW-TDDGNGQCHAEEDRRDAVAVCGILG 63 Query: 67 IELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGADYIAT 126 I H +F+ EYW VF FLAEY GRTPNPD+LCN+EIKFK FLE A +LGAD IAT Sbjct: 64 IAFHFRDFSHEYWQEVFTHFLAEYANGRTPNPDVLCNREIKFKHFLETA-RELGADRIAT 122 Query: 127 GHYVRRADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQVRKIAEDLG 186 GHY R + LLRG D +KDQSYFL+ L EQ+A +LFP+G+LEK Q+R++A G Sbjct: 123 GHYARIEHYRQRWHLLRGADRSKDQSYFLHQLGQEQLAATLFPIGDLEKQQLRQLAHQTG 182 Query: 187 LVTAKKKDSTGICFIGERKFREFLGRYLPAQPGKIITVDGDEIGEHQGLMYHTLGQRKGL 246 L T KKDSTGICFIGER FREFL +YLPAQPG+I I EH G+ Y TLGQR+GL Sbjct: 183 LPTHAKKDSTGICFIGERNFREFLKQYLPAQPGEIRDPQEQRIAEHPGVFYFTLGQRQGL 242 Query: 247 GIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLHWVDREPFTGTMRC 306 IGG + PWYV+ KD+ N+L V Q + P L S L ++ HWV P T C Sbjct: 243 NIGGVRNRPPSPWYVIGKDLATNVLYVDQHRDSPFLQSRWLRSEPAHWVSGSPPAHTFTC 302 Query: 307 TVKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTPGQSAVFYNGEVCLGGGII 360 T +TRYRQ D PC V +D ++V F AVTPGQS V Y+G CLGG +I Sbjct: 303 TAQTRYRQADEPCKVTVRNDGSLDVDFTRTQWAVTPGQSLVLYDGNECLGGAVI 356 >UniRef50_A2SLT0 tRNA-specific 2-thiouridylase mnmA n=1 Tax=Methylibium petroleiphilum PM1 RepID=MNMA_METPP Length = 396 Score = 487 bits (1254), Expect = e-136, Method: Composition-based stats. Identities = 210/394 (53%), Positives = 253/394 (64%), Gaps = 36/394 (9%) Query: 1 MSETAKKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYCTAAADLADAQA 60 MS ++V+VG+SGGVDS+VSAWLL+QQG++V GLFMKNWE+DD +EYC++ D DA + Sbjct: 1 MSAKKERVVVGLSGGVDSAVSAWLLKQQGHEVVGLFMKNWEDDDDDEYCSSRQDFLDAAS 60 Query: 61 VCDKLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLG 120 V D +GIE+ VNFAAEY D VF FL EY+AGRTPNPD+LCN EIKFKAFL+ A LG Sbjct: 61 VADVIGIEIEHVNFAAEYRDRVFAEFLREYEAGRTPNPDVLCNAEIKFKAFLDHAL-RLG 119 Query: 121 ADYIATGHY---------------------------VRRADVDGKSRLLRGLDSNKDQSY 153 A IATGHY R + G+ LL+GLD++KDQSY Sbjct: 120 AGKIATGHYARVRRAPALPGMPDGPLDESSAGALDRARVREAGGRFELLKGLDASKDQSY 179 Query: 154 FLYTLSHEQIAQSLFPVGELEKPQVRKIAEDLGLVTAKKKDSTGICFIGERKFREFLGRY 213 FL+ LS Q+A++LFPVGEL K +VR+IA ++ L A KKDSTGICFIGER FREFL RY Sbjct: 180 FLHRLSQAQLARTLFPVGELPKTEVRRIAAEIRLPVAAKKDSTGICFIGERPFREFLNRY 239 Query: 214 LPAQPGKIITVDGDEIGEHQGLMYHTLGQRKGLGIGGTKE-------GTEEPWYVVDKDV 266 L PG I G +GEH GL ++TLGQRKG+GIGG KE PW+V KD Sbjct: 240 LAHAPGPIKDERGRTLGEHVGLSFYTLGQRKGIGIGGVKERGAARGGADHAPWFVARKDR 299 Query: 267 ENNILVVAQGHEHPRLMSVGLIAQQLHWVDREPFTGTMRCTVKTRYRQTDIPCTVKALDD 326 +N L V QGH+HP L S L A W+ P KTRYRQ D C + D Sbjct: 300 PHNTLYVVQGHDHPWLQSFRLEADDASWIAGTPP-APGALAAKTRYRQADASCVLAPGAD 358 Query: 327 DRIEVIFDEPVAAVTPGQSAVFYNGEVCLGGGII 360 R + F P AVTPGQSAV Y+GEVCLGGG+I Sbjct: 359 GRFRLDFGVPQWAVTPGQSAVLYDGEVCLGGGVI 392 >UniRef50_D1SR18 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase n=1 Tax=Acidovorax avenae subsp. avenae ATCC 19860 RepID=D1SR18_9BURK Length = 403 Score = 486 bits (1252), Expect = e-136, Method: Composition-based stats. Identities = 209/399 (52%), Positives = 260/399 (65%), Gaps = 37/399 (9%) Query: 1 MSETAK-KVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYCTAAADLADAQ 59 M+ + K +++VG+SGGVDS+V+A LL+QQG++V G+FMKNWE+DD EYC++ D DA Sbjct: 1 MTASPKQRIVVGLSGGVDSAVTAHLLKQQGHEVVGIFMKNWEDDDDSEYCSSNVDFVDAA 60 Query: 60 AVCDKLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDL 119 AV D +GIE+ VNFAAEY D VF FL EY+AGRTPNPD+LCN EIKFKAFL+ A + Sbjct: 61 AVADVIGIEIEHVNFAAEYKDRVFAEFLREYEAGRTPNPDVLCNAEIKFKAFLDHAM-RV 119 Query: 120 GADYIATGHYVRRADVDG---------------------------KSRLLRGLDSNKDQS 152 GA+ IATGHY R V + LL+GLD KDQS Sbjct: 120 GAEKIATGHYARVRRVAADPGAMSGRHDRMESHATACDSAQDPHWRYELLKGLDPAKDQS 179 Query: 153 YFLYTLSHEQIAQSLFPVGELEKPQVRKIAEDLGLVTAKKKDSTGICFIGERKFREFLGR 212 YFL+ L+ Q++++LFPVGEL K +VR+IAE++GL AKKKDSTGICFIGER FREFL R Sbjct: 180 YFLHRLNQAQLSRTLFPVGELRKTEVRRIAEEIGLPNAKKKDSTGICFIGERPFREFLNR 239 Query: 213 YLPAQPGKIITVDGDEIGEHQGLMYHTLGQRKGLGIGGTKE-------GTEEPWYVVDKD 265 Y+ PG I+ G ++G+H GL ++TLGQR+GLGIGG KE G PW+V K+ Sbjct: 240 YIQHAPGPILDDRGRKLGQHVGLSFYTLGQRQGLGIGGVKEKGAQRGGGEHAPWFVARKE 299 Query: 266 VENNILVVAQGHEHPRLMSVGLIAQQLHWVDREPFTGTMRCTVKTRYRQTDIPCTVKALD 325 VE N+L V QGH+HP L+S L A WV P C KTRYRQ D CTV + Sbjct: 300 VERNVLRVVQGHDHPWLLSHTLQATDASWVAGRPPAAGA-CAAKTRYRQQDAACTVTPAE 358 Query: 326 DDRIEVIFDEPVAAVTPGQSAVFYNGEVCLGGGIIEQRL 364 + F E AVTPGQSAV Y+GEVCLGGG+I Sbjct: 359 GGDFALAFPEAQWAVTPGQSAVLYDGEVCLGGGVITAAG 397 >UniRef50_A5GE36 tRNA-specific 2-thiouridylase mnmA n=20 Tax=Bacteria RepID=MNMA_GEOUR Length = 375 Score = 485 bits (1248), Expect = e-135, Method: Composition-based stats. Identities = 154/372 (41%), Positives = 218/372 (58%), Gaps = 20/372 (5%) Query: 2 SETAKKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWE-------EDDGEEYCTAAAD 54 + K+V++ MSGGVDSSV+A LL+++G++V G+ M+ W+ E + + C + D Sbjct: 4 NNKRKRVVIAMSGGVDSSVAAALLKEEGHEVIGISMQVWDYTRFTAEEGEKFDTCCSLDD 63 Query: 55 LADAQAVCDKLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEF 114 + DA+ V ++L I + VNF E+ + V + F+ EY GRTPNP + CN+ IKF+ L+ Sbjct: 64 IHDARRVAEQLEIPFYVVNFEEEFQNLVIDDFVNEYLLGRTPNPCVRCNQWIKFELLLKK 123 Query: 115 AAEDLGADYIATGHYVRRA-DVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGEL 173 A LGAD IATGHY R D DG+ RL++G+D KDQSYFL+TL+ EQ+A +LFP+G + Sbjct: 124 A-RGLGADMIATGHYARTEQDADGRYRLMKGVDPAKDQSYFLFTLTQEQLAMTLFPLGGM 182 Query: 174 EKPQVRKIAEDLGLVTAKKKDSTGICFIGERKFREFLGRYLPAQ--PGKIITVDGDEIGE 231 K +VR +A GL A+K +S ICF+ + + F+ Q G I+ G +G Sbjct: 183 TKQEVRALAAGYGLRVAEKGESQEICFVPDNDYVRFIEEERGKQLLSGNIVDRKGKVLGV 242 Query: 232 HQGLMYHTLGQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQ 291 H G +T+GQRKGLGI EP YV+ D + V L S GLIA Sbjct: 243 HDGTYRYTVGQRKGLGIAH-----PEPLYVLGVDAARKEVTVGPR---DALYSDGLIATA 294 Query: 292 LHWVDREPFTGTMRCTVKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTPGQSAVFYNG 351 ++W+ P + + K RYR IPC + L D+R EV F E +VTPGQ+ VFY+G Sbjct: 295 INWIAPTP-ETAIEASCKIRYRHHPIPCRILPLADNRAEVRFTEREKSVTPGQAVVFYDG 353 Query: 352 EVCLGGGIIEQR 363 + LGGG IE Sbjct: 354 DTVLGGGWIEHA 365 >UniRef50_C3ZAA6 Putative uncharacterized protein n=1 Tax=Branchiostoma floridae RepID=C3ZAA6_BRAFL Length = 383 Score = 483 bits (1243), Expect = e-135, Method: Composition-based stats. Identities = 160/369 (43%), Positives = 229/369 (62%), Gaps = 14/369 (3%) Query: 4 TAKKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYCTAAADLADAQAVCD 63 + + V+V +SGGVDSSV+A LL+++GYQV G+FM+NW+ + C A D DA+ VC Sbjct: 2 SLRHVVVALSGGVDSSVAALLLKRKGYQVTGVFMRNWDTVNELGVCQADRDCEDAEYVCR 61 Query: 64 KLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGADY 123 +L I H VN +YW++VF L EY+ G TPNPDILCNK IKF+ F + + AD Sbjct: 62 RLDIPFHQVNLVKDYWNDVFSEMLKEYQHGWTPNPDILCNKRIKFRTFFNYVMDKFEADA 121 Query: 124 IATGHYVRRADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQVRKIAE 183 +ATGHY R + D +LL+ LDS KDQ++FL + + + ++LFP+GEL KP V+++A+ Sbjct: 122 LATGHYARTSIHD--VKLLQALDSWKDQTFFLSQIPQQALRRALFPLGELTKPVVKQMAQ 179 Query: 184 DLGL-VTAKKKDSTGICFIGERKFREFLGRYLPAQPGKIIT-VDGDEIGEHQGLMYHTLG 241 D G AKKK+S GICFIG R F FL YL +PG+ ++ VDG +GEH+G +T+G Sbjct: 180 DAGFTHIAKKKESMGICFIGTRNFPTFLQEYLETEPGQFVSVVDGKVLGEHKGACMYTIG 239 Query: 242 QRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLHWVDREPF- 300 QR GLG G +EPW+VVD+D N + V +HP L ++ + +HW+ P Sbjct: 240 QRAGLG------GMKEPWFVVDRDTSTNSIFVCPTTDHPALYRQLIMTESVHWIADPPRD 293 Query: 301 ---TGTMRCTVKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTPGQSAVFYNGEVCLGG 357 C + ++R + CT+ ++++ V EP+ A+TPGQ AVFY G+ CLGG Sbjct: 294 LYVDQMYDCHFRFQHRMPLVKCTLTLSGNNQVWVSLAEPIRALTPGQYAVFYKGDECLGG 353 Query: 358 GIIEQRLPL 366 G I + P Sbjct: 354 GKIIKLGPT 362 >UniRef50_D2RN19 tRNA(5-methylaminomethyl-2-thiouridylate)-methyl transferase n=2 Tax=Clostridiales RepID=D2RN19_ACIFE Length = 356 Score = 482 bits (1242), Expect = e-135, Method: Composition-based stats. Identities = 151/363 (41%), Positives = 207/363 (57%), Gaps = 16/363 (4%) Query: 7 KVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDD----GEEYCTAAADLADAQAVC 62 K ++ MSGGVDSSVSA L+Q GY G MK + D + C + +D+ DA++VC Sbjct: 2 KALIAMSGGVDSSVSAKLMQDAGYDCIGCNMKLYNNPDAGYCSTKTCCSLSDVEDARSVC 61 Query: 63 DKLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGAD 122 +LG+ + N+ E+ +V E F Y G TPNP I CNK +KF A + A +LG D Sbjct: 62 ARLGMPFYVFNYTEEFKHDVMEKFARSYTLGHTPNPCIDCNKFLKFGALYQRA-RELGCD 120 Query: 123 YIATGHYVR--RADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQVRK 180 + TGHY R + + GK LL+ LD KDQSY LY L+ EQ+A + FP+G K R+ Sbjct: 121 CVVTGHYARIRKNETTGKYELLKALDPKKDQSYVLYNLTQEQLAHTCFPLGGYHKTHTRE 180 Query: 181 IAEDLGLVTAKKKDSTGICFIGERKFREFLGRYLP--AQPGKIITVDGDEIGEHQGLMYH 238 IAE+ G + + K DS ICF+ ++ + + R L QPG + ++G+ IG+H+G++Y+ Sbjct: 181 IAEENGFINSHKPDSQDICFVPNGQYTDAVQRILDYRPQPGPFLDLEGNVIGQHRGIIYY 240 Query: 239 TLGQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLHWVDRE 298 TLGQ K LG+ P YVV D + N +VV L S + +W+ E Sbjct: 241 TLGQHKHLGLNQPD----FPLYVVKIDPKKNAIVVGPSE---ALFSRKASVGEANWISGE 293 Query: 299 PFTGTMRCTVKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTPGQSAVFYNGEVCLGGG 358 G +RC VK RYRQ P TV D + FDEP A+TPGQ+AV Y+GEV LGGG Sbjct: 294 VPAGPVRCQVKVRYRQDAQPATVTPTGKDTFTIQFDEPQRAITPGQAAVLYDGEVVLGGG 353 Query: 359 IIE 361 IE Sbjct: 354 TIE 356 >UniRef50_B0K991 tRNA-specific 2-thiouridylase mnmA 2 n=9 Tax=Clostridia RepID=MNMA2_THEP3 Length = 364 Score = 480 bits (1237), Expect = e-134, Method: Composition-based stats. Identities = 151/372 (40%), Positives = 232/372 (62%), Gaps = 18/372 (4%) Query: 2 SETAKKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEED-----DGEEYCTAAADLA 56 E +V +GMSGGVDSSV+A+LL++QG+ V GL M+ W + D ++ C + Sbjct: 1 MEINNRVAIGMSGGVDSSVAAYLLKKQGFDVIGLTMRVWVDHEAKAFDSDKSCCSLKATQ 60 Query: 57 DAQAVCDKLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAA 116 DA+ V + LGI +TV+ + ++D + F+ EY GRTPNP +LCN++IKF LE A Sbjct: 61 DAKKVAEILGIPHYTVDLSKIFYDKIVNYFVNEYLKGRTPNPCVLCNRQIKFGELLEKAF 120 Query: 117 EDLGADYIATGHYVRRA--DVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELE 174 E LGA YIATGHYVR+ + + L +G+DS+KDQSY LY L+ +Q+ +LFP+G + Sbjct: 121 E-LGAYYIATGHYVRKEYDEKTKRYLLKKGIDSSKDQSYVLYRLTQKQLEHALFPLGNYK 179 Query: 175 KPQVRKIAEDLGLVTAKKKDSTGICFIGERKFREFLGRYL--PAQPGKIITVDGDEIGEH 232 K ++R +AE+L L AKK +S ICFI + + + R + +PG+ V G +G H Sbjct: 180 KEEIRALAEELKLPVAKKPESQEICFIPDNDYSGLIKRQVKDEIKPGEFRDVHGKFLGYH 239 Query: 233 QGLMYHTLGQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQL 292 +G++++T+GQR+GLG+ ++ P YVVD DV+NN++VV + + LI+ Sbjct: 240 KGIIHYTIGQRRGLGLS-----SDRPLYVVDIDVKNNVVVVGHQED---VWGEELISSNN 291 Query: 293 HWVDREPFTGTMRCTVKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTPGQSAVFYNGE 352 +++ E M+ T K RY + +K ++D++ V F +P A+TPGQS VFY+ + Sbjct: 292 NFISIEKLEKEMKVTAKIRYTAKEEEAIIKPYEEDKVLVKFLKPQRAITPGQSVVFYDKD 351 Query: 353 VCLGGGIIEQRL 364 V +GGGIIE++L Sbjct: 352 VVVGGGIIERKL 363 >UniRef50_A1WWV9 tRNA-specific 2-thiouridylase mnmA n=2 Tax=Bacteria RepID=MNMA_HALHL Length = 383 Score = 479 bits (1234), Expect = e-134, Method: Composition-based stats. Identities = 178/367 (48%), Positives = 227/367 (61%), Gaps = 3/367 (0%) Query: 1 MSETAKKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYCTAAADLADAQA 60 M+E+ K+++VG+SGGVDS+V+A L + G++V GLFMKNWE+DD C+A D+A A A Sbjct: 1 MTESPKRIVVGLSGGVDSAVAALRLVRAGHEVIGLFMKNWEDDDTLTQCSAEDDIAAAVA 60 Query: 61 VCDKLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLG 120 V + LGI + VNFAA Y VFE L E +AGRTPNPDILCN+ +KF FL A E Sbjct: 61 VAEHLGIPIRRVNFAAHYRREVFEHALQELRAGRTPNPDILCNRHVKFDRFLRHAREQFE 120 Query: 121 ADYIATGHYVRR-ADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQVR 179 AD +ATGHY R DG+ LLRG+D +KDQSYFL + + + FP+G+ K VR Sbjct: 121 ADAVATGHYARTGRAGDGEPALLRGIDPSKDQSYFLAGVPRQALDAVRFPLGDSTKETVR 180 Query: 180 KIAEDLGLVTAKKKDSTGICFIGERKFREFLGRYLPAQPGKIITVDGDEIGEHQGLMYHT 239 A L + DSTGICFIGER F +F+ RY+ PG I+T DG EIG H GL ++T Sbjct: 181 AEARSAALPNFDRPDSTGICFIGERDFTQFMQRYIDPHPGPILTEDGREIGRHCGLAFYT 240 Query: 240 LGQRKGLGIGGTKEG-TEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLHWVDRE 298 LGQR+GLGIGG + + PWYV KD N L V QGH+HP L S + + HW+ Sbjct: 241 LGQRRGLGIGGDRNRDSSAPWYVAGKDARRNALFVVQGHDHPWLQSAAVSTEPFHWLAPV 300 Query: 299 PFTGTMRCTVKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTPGQSAVFYNGEVCLGGG 358 P G R + RYRQ + + R+ FDEP A TPGQ V Y+ E CLGGG Sbjct: 301 PAEGA-RLHAQVRYRQEPQAGQLSHAEGGRVVFRFDEPQRAATPGQHLVLYDREQCLGGG 359 Query: 359 IIEQRLP 365 +I+ P Sbjct: 360 VIDTAHP 366 >UniRef50_C9KPU1 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase n=2 Tax=Clostridiales RepID=C9KPU1_9FIRM Length = 366 Score = 478 bits (1232), Expect = e-133, Method: Composition-based stats. Identities = 153/368 (41%), Positives = 223/368 (60%), Gaps = 16/368 (4%) Query: 4 TAKKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEE----DDGEEYCTAAADLADAQ 59 T KKV+V MSGGVDSS++A LL++QGY+ G+ M+ EE D+ + C + + + DA+ Sbjct: 2 TKKKVVVAMSGGVDSSLTAALLKEQGYEAIGVTMRLSEESRDFDENDRGCCSLSSVDDAR 61 Query: 60 AVCDKLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDL 119 V + +GI +T+NF + + V + FLA+Y G TPNP I CN+ +KF+ L+ A E L Sbjct: 62 RVAEIIGIPHYTMNFKEMFQEKVIDYFLADYAKGWTPNPCIACNRYVKFEGLLQKAME-L 120 Query: 120 GADYIATGHYVRR-ADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQV 178 GADY+ATGHY R D G+ L +G+D++KDQSY LY L+ + +A L P+G+ K + Sbjct: 121 GADYVATGHYARIAQDESGRYVLKKGIDTHKDQSYALYHLNQQSLAHFLMPLGDYTKVET 180 Query: 179 RKIAEDLGLVTAKKKDSTGICFIGERKFREFLGRYLPA--QPGKIITVDGDEIGEHQGLM 236 R++AE L A K DS ICF+ ++ +L P+ PG I+ +G +G H+G+ Sbjct: 181 REMAERYKLPVAHKPDSQEICFVPHDDYKAYLRAKNPSCLHPGDIVDKEGHVLGHHEGVP 240 Query: 237 YHTLGQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLHWVD 296 +T+GQRKGLGI EP YVVD D+ +N +VV + + S GLIA L+W+ Sbjct: 241 LYTIGQRKGLGI-----AHPEPLYVVDLDMAHNRVVVGGAGD---VFSDGLIAGDLNWIA 292 Query: 297 REPFTGTMRCTVKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTPGQSAVFYNGEVCLG 356 + + T K RY + + V+ L ++ V F EP AVTPGQS VFY G+ +G Sbjct: 293 IDALEAPIEVTAKVRYGRREGRAHVEPLAGGKVRVHFAEPQRAVTPGQSVVFYAGDTVVG 352 Query: 357 GGIIEQRL 364 GGIIE+ + Sbjct: 353 GGIIEKAI 360 >UniRef50_C0B5F7 Putative uncharacterized protein n=2 Tax=Lachnospiraceae RepID=C0B5F7_9FIRM Length = 359 Score = 476 bits (1227), Expect = e-133, Method: Composition-based stats. Identities = 142/364 (39%), Positives = 222/364 (60%), Gaps = 17/364 (4%) Query: 5 AKKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGE-----EYCTAAADLADAQ 59 KKV+VGMSGGVDSSV+A+LL++QGY V G+ M+ W++++ + C + + DA+ Sbjct: 3 KKKVVVGMSGGVDSSVAAYLLKEQGYDVIGVTMQIWQDEESKIQEENGGCCGLSAVDDAR 62 Query: 60 AVCDKLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDL 119 V ++GI + +NF ++ + V + F+ EY GRTPNP I CN+ +K+++ L + E + Sbjct: 63 KVAAQIGIPYYVMNFKKDFQEKVIDYFVDEYLHGRTPNPCIACNRYVKWESLLTRSME-I 121 Query: 120 GADYIATGHYVRRADV-DGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQV 178 GADYIATGHY R + +G+ + +KDQ+Y LY L+ +Q+ ++L PVGE EK Q+ Sbjct: 122 GADYIATGHYARVEQLPNGRYAIRHSATWSKDQTYALYNLTQDQLRRTLMPVGEYEKDQI 181 Query: 179 RKIAEDLGLVTAKKKDSTGICFIGERKFREFLGRYLPAQ--PGKIITVDGDEIGEHQGLM 236 R+IA+++GL A K DS ICF+ + + F+ + G +T DG +G H+G++ Sbjct: 182 REIAKEIGLQIANKPDSQDICFVSDDDYASFIEEESDQKIPEGNFVTPDGKILGRHKGII 241 Query: 237 YHTLGQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLHWVD 296 ++T+GQRKGLG+ P +V++ + N +V+ + LM+ + A +L+++ Sbjct: 242 HYTIGQRKGLGLSLGY-----PAFVLEIRPDTNEVVIGTNED---LMTTRVRANKLNFMT 293 Query: 297 REPFTGTMRCTVKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTPGQSAVFYNGEVCLG 356 E G MR K RY CTV+ +D IE IF+ P AVTPGQ+ V Y+G+ LG Sbjct: 294 VEDLEGEMRVFAKIRYNHKGDWCTVRKTGEDEIECIFETPQRAVTPGQALVLYDGDYVLG 353 Query: 357 GGII 360 GG I Sbjct: 354 GGTI 357 >UniRef50_Q253W3 tRNA-specific 2-thiouridylase mnmA n=3 Tax=Chlamydophila RepID=MNMA_CHLFF Length = 361 Score = 476 bits (1225), Expect = e-133, Method: Composition-based stats. Identities = 171/359 (47%), Positives = 228/359 (63%), Gaps = 9/359 (2%) Query: 5 AKKVIVGMSGGVDSSVSAWLLQQ-QGYQVEGLFMKNWEEDDGEEYCTAAADLADAQAVCD 63 K V+V MSGGVDSSV A+LL+ Y+V GLFMKNWEE+DGE C+ A D D + V Sbjct: 2 NKTVVVAMSGGVDSSVVAYLLKNYTSYKVLGLFMKNWEEEDGEGLCSTAKDYEDVEKVAG 61 Query: 64 KLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGADY 123 +L I +TV+FA EY + VF FL Y G TPNPD+LCN+EIKF L+ +LG D+ Sbjct: 62 QLDIPYYTVSFAKEYRERVFSRFLTGYSEGYTPNPDVLCNREIKFD-LLQKKVRELGGDF 120 Query: 124 IATGHYVRRADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQVRKIAE 183 +ATGHY R + + LLRG+D KDQSYFL E + +FP+G+ K +VR IA Sbjct: 121 LATGHYCRVSPDENGVNLLRGIDPQKDQSYFLCGTRKESLENVIFPLGDKTKTEVRSIAA 180 Query: 184 DLGLVTAKKKDSTGICFIGERKFREFLGRYLPAQPGKIITVDG-DEIGEHQGLMYHTLGQ 242 GL TA+K+DSTGICFIG+R F+ FL +++P G I+ D +G H+G Y+T+GQ Sbjct: 181 QAGLATAQKRDSTGICFIGKRPFKSFLEKFVPNLEGNIVDYDSQRVVGHHEGAHYYTIGQ 240 Query: 243 RKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLHWVDREPFTG 302 R+GL +G G+E+P YVV KD+E NI+ + +G +HP L L A++L+W Sbjct: 241 RRGLDLG----GSEKPCYVVGKDMEKNIVYIVRGEDHPLLYQTELTARELNWFVS--PKS 294 Query: 303 TMRCTVKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTPGQSAVFYNGEVCLGGGIIE 361 C+ K RYR D C + +D + V F PV A+TPGQ+ FY+GE CLGGG+IE Sbjct: 295 ITTCSAKVRYRSNDEECEILLRGEDEVLVRFASPVKAITPGQAIAFYDGERCLGGGVIE 353 >UniRef50_A8DJE2 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase n=1 Tax=Candidatus Chloracidobacterium thermophilum RepID=A8DJE2_9BACT Length = 392 Score = 474 bits (1221), Expect = e-132, Method: Composition-based stats. Identities = 151/398 (37%), Positives = 212/398 (53%), Gaps = 48/398 (12%) Query: 1 MSETAKKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEE---------DDGEEYCTA 51 M+E ++ V MSGGVDSS +A LL++QGY V G M+ W + + C + Sbjct: 1 MTE---RIAVAMSGGVDSSTAAALLKEQGYDVVGFSMQLWNQRRINVDAEGNPLPSRCCS 57 Query: 52 AADLADAQAVCDKLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAF 111 DL DA+AV + LGI + +NF E+ V F+ Y G TP+P + CN +KF Sbjct: 58 LDDLYDARAVAEALGIPFYVLNFEEEFEARVVRPFVVSYLNGNTPSPCVACNSRMKFDTL 117 Query: 112 LEFAAEDLGADYIATGHYVRR--ADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFP 169 + A D+GA +ATGHY R D G+ L +G D +KDQSYFL+ L+ EQ+A +LFP Sbjct: 118 VALA-RDVGAAKVATGHYARVQFNDTTGRWELRKGRDLHKDQSYFLFELTQEQLAWALFP 176 Query: 170 VGELEKPQVRKIAEDLGLVTAKKKDSTGICFIGERKFREFLGRYLP-------------- 215 +GEL K + R +A GL TA+K +S ICFI + + F+ RYL Sbjct: 177 LGELSKAETRALARRYGLPTAEKAESQEICFIPDGNYARFIERYLAEAGGTVAGEPQSPV 236 Query: 216 -------------AQPGKIITVDGDEIGEHQGLMYHTLGQRKGLGIGGTKEGTEEPWYVV 262 QPG+I+T DG +G H G+ ++T+GQR+GLG+ G P YVV Sbjct: 237 APTLVQLGLRRNMPQPGEIVTTDGRVLGRHNGIHHYTVGQRRGLGV---TAGDGRPLYVV 293 Query: 263 DKDVENNILVVAQGHEHPRLMSVGLIAQQLHWVDREPFTGTMRCTVKTRYRQTDIPCTVK 322 D ++V L L A +++W+ T RC + RYR + P T+ Sbjct: 294 RIDAARGQVIVGPEE---ALTGKTLTATRVNWITLPELTAPRRCAARIRYRHLEAPATIY 350 Query: 323 ALDDDRIEVIFDEPVAAVTPGQSAVFYNGEVCLGGGII 360 L D + V+FD P A+TPGQ+ VFY+GE+ LGGG I Sbjct: 351 PLPDGNVRVVFDIPQKAITPGQAVVFYDGELVLGGGWI 388 >UniRef50_A6LSF2 tRNA-specific 2-thiouridylase mnmA n=19 Tax=Clostridiales RepID=MNMA_CLOB8 Length = 358 Score = 471 bits (1213), Expect = e-131, Method: Composition-based stats. Identities = 142/366 (38%), Positives = 217/366 (59%), Gaps = 15/366 (4%) Query: 5 AKKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDG----EEYCTAAADLADAQA 60 KKV+VGMSGGVDSSV+A+LL+QQGY V G M+ W+ D+ E C + + + DA+ Sbjct: 2 KKKVLVGMSGGVDSSVAAYLLKQQGYDVIGATMQIWQHDEEFEEREGGCCSLSAVDDARR 61 Query: 61 VCDKLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLG 120 VCDKL I + +NF + + V + F+ EY G+TPNP I CNK +KF L A +G Sbjct: 62 VCDKLDIPFYVLNFRDYFKEKVIDKFVQEYIDGKTPNPCIECNKHLKFDELLRRA-RGIG 120 Query: 121 ADYIATGHYVRRADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQVRK 180 ADY+ATGHY + D + L+R D KDQ+Y LY + +Q+ +L P G+ EK ++R+ Sbjct: 121 ADYVATGHYAKIEKRDDRYLLIRSDDDRKDQTYALYNFTQDQLEHTLMPCGDYEKTKIRE 180 Query: 181 IAEDLGLVTAKKKDSTGICFIGERKFREFLGRYLPAQ--PGKIITVDGDEIGEHQGLMYH 238 IA+++GL KKDS ICFI + +++ P + PG + G+ +G+H+G++Y+ Sbjct: 181 IAKEIGLAVHNKKDSEEICFISDNNHGKYISEAEPNRVKPGNFVDKSGNILGKHKGIVYY 240 Query: 239 TLGQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLHWVDRE 298 T+GQRKGLG+ + P +V + + + N +V+ + + LIA ++++ + Sbjct: 241 TIGQRKGLGLSLGR-----PVFVTNINAKTNEVVLGSEDD---IFKTELIATDVNFIPFD 292 Query: 299 PFTGTMRCTVKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTPGQSAVFYNGEVCLGGG 358 + T K RY T+ L + R++VIF E A+T GQS VFY+ E+ +GGG Sbjct: 293 KLEKEIEVTAKIRYSARPAEATLIPLPNGRVKVIFKEKQRAITKGQSVVFYDDEIVVGGG 352 Query: 359 IIEQRL 364 IIE + Sbjct: 353 IIESII 358 >UniRef50_C0E8G4 Putative uncharacterized protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0E8G4_9CLOT Length = 352 Score = 469 bits (1207), Expect = e-131, Method: Composition-based stats. Identities = 148/360 (41%), Positives = 216/360 (60%), Gaps = 16/360 (4%) Query: 9 IVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDD----GEEYCTAAADLADAQAVCDK 64 ++GMSGGVDSSV+A LL +QGY+V G + W+ +D E C + D+ DA+ VC + Sbjct: 1 MIGMSGGVDSSVAAALLIEQGYEVVGATFRLWKPEDDLFDSEATCCSLDDINDAREVCHQ 60 Query: 65 LGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGADYI 124 LGI + +N E+ + V + F+ EY+AGRTPNP I+CN++IKF F + AA LG DY+ Sbjct: 61 LGIPHYVLNLKREFKEAVVQNFVEEYQAGRTPNPCIVCNQKIKFDYFYQKAA-ALGFDYV 119 Query: 125 ATGHYVRRADVD-GKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQVRKIAE 183 ATGHY R + G+ +L + KDQSYFLY + + + LFP+G KPQVR++AE Sbjct: 120 ATGHYARIEQNEQGEFQLKTAAYAQKDQSYFLYGIPYPNLGHILFPLGGYTKPQVRELAE 179 Query: 184 DLGLVTAKKKDSTGICFIGERKFREFLGRYLPAQP--GKIITVDGDEIGEHQGLMYHTLG 241 G + K+DS ICF+ + FL R+ P G I G +GEH+G+ ++T+G Sbjct: 180 KYGFSVSHKRDSQEICFVDRNGYGTFLERFTGTIPPKGNFIDSQGTVLGEHKGIWHYTVG 239 Query: 242 QRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLHWVDREPFT 301 QRKGLG+ +P YV + + +N + + E+ S L A++++++ P + Sbjct: 240 QRKGLGM-----AFGKPMYVSEINPADNTVRLVDDEEN---YSSRLTAERMNYLIPHPPS 291 Query: 302 GTMRCTVKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTPGQSAVFYNGEVCLGGGIIE 361 +R VK R R P + L + +IE+ FD+P A+T GQSAV Y+GEVCLGGGII Sbjct: 292 KPVRVQVKIRNRAEFAPALLTPLSEAKIELAFDQPQRAITKGQSAVLYDGEVCLGGGIIT 351 >UniRef50_B0TFA7 tRNA-specific 2-thiouridylase mnmA n=97 Tax=Bacteria RepID=MNMA_HELMI Length = 385 Score = 468 bits (1205), Expect = e-130, Method: Composition-based stats. Identities = 152/375 (40%), Positives = 214/375 (57%), Gaps = 21/375 (5%) Query: 1 MSETAKKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEED---DGEEYCTAAADLAD 57 M ET V+V MSGGVDSSV+A LL +QGY V G+ ++ W +D E C + + + D Sbjct: 1 MKET---VVVAMSGGVDSSVTAALLLEQGYDVIGVTLQIWPKDAPEGAEGGCCSLSAVED 57 Query: 58 AQAVCDKLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAE 117 A+ V KLG+ + +NF + V E F EY AG+TPNP I CN+ IKF+ L+ + Sbjct: 58 AKRVASKLGVPHYVLNFRDYFETEVIEYFGREYLAGQTPNPCIRCNRVIKFEGLLQKSL- 116 Query: 118 DLGADYIATGHYVRRADV--DGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEK 175 LGA +ATGHY R G+ RL RG+D+NKDQSY L+ ++ EQ++++LFP+G K Sbjct: 117 ALGAAKVATGHYARIEQDSATGRYRLGRGIDANKDQSYALFNMTQEQLSRTLFPLGGFTK 176 Query: 176 PQVRKIAEDLGLVTAKKKDSTGICFIGERKFREFLGRYLPA---QPGKIITVDGDEIGEH 232 P++R+ A LGL A K DS ICFI + +R FL P QPG + +G+ IG H Sbjct: 177 PEIREKAAQLGLAVASKPDSQEICFIPDNDYRRFLEERYPDHRFQPGPFVDQEGNVIGTH 236 Query: 233 QGLMYHTLGQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQL 292 +GL ++T+GQRKGLG+ P YV+ DVE+N +V+ + L+A L Sbjct: 237 RGLPFYTVGQRKGLGV-----AFGFPAYVIALDVEHNAVVIGPDE---AVKGRRLLADDL 288 Query: 293 HWVDREPFTGTMRCTVKTRYRQTDIPCTVKALDDDR-IEVIFDEPVAAVTPGQSAVFYNG 351 +W+D M K RY + + + D + V F P A+TPGQ+ VFY G Sbjct: 289 NWIDIAGLKAPMEVEAKIRYSASPAIAVISPVKDGSAVIVEFAAPQRAITPGQAVVFYRG 348 Query: 352 EVCLGGGIIEQRLPL 366 + +GGG I + L L Sbjct: 349 DWVVGGGTIVRNLDL 363 >UniRef50_A5UV64 tRNA-specific 2-thiouridylase mnmA n=7 Tax=Bacteria RepID=MNMA_ROSS1 Length = 373 Score = 466 bits (1200), Expect = e-130, Method: Composition-based stats. Identities = 145/379 (38%), Positives = 202/379 (53%), Gaps = 32/379 (8%) Query: 7 KVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDG---EEYCTAAADLADAQAVCD 63 K++V MSGGVDSS++A LL + G+ V G+ + WE DD E C + A+ VC Sbjct: 3 KIMVAMSGGVDSSLAAALLHEAGHDVTGVTLHLWEGDDDRLAESLCCSQEMTESARRVCA 62 Query: 64 KLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGADY 123 +LGI + N+ E+ V E FL EY +G TPNP + CN+EIKF+A L A LG DY Sbjct: 63 QLGIPYYVFNYQREFRRYVIEYFLREYASGFTPNPCLECNREIKFRALLARA-RTLGFDY 121 Query: 124 IATGHYVRRADVDGK------------------SRLLRGLDSNKDQSYFLYTLSHEQIAQ 165 +ATGHY R + + RLLR +D KDQSY LY L + +A+ Sbjct: 122 VATGHYARIRADETRHNGEDAGLPPAERAQRTTYRLLRAVDREKDQSYMLYMLGQDDLAR 181 Query: 166 SLFPVGELEKPQVRKIAEDLGLVTAKKKDSTGICFIGERKFREFLGRYLPA--QPGKIIT 223 +FP+GE K +VR +A GL +A + +S ICF+ +R L P +PG I+ Sbjct: 182 LIFPIGEYTKAEVRAMAAARGLASANRPESQDICFVPGGDYRNLLREERPDALRPGPILD 241 Query: 224 VDGDEIGEHQGLMYHTLGQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLM 283 ++G E+G HQGL +T+GQR+GLGI T +P YV DV N ++V L Sbjct: 242 LEGREVGRHQGLPLYTIGQRRGLGI-----ATGQPMYVTALDVARNAVIVGPES---ALR 293 Query: 284 SVGLIAQQLHWVDREPFTGTMRCTVKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTPG 343 L A+ + +V C + R +P V + ++V F P AVTPG Sbjct: 294 RESLRAEWVTFVSGMWPEAPFDCLAQIRAHADAVPARVIPGEAGTVDVHFSRPQRAVTPG 353 Query: 344 QSAVFYNGEVCLGGGIIEQ 362 Q+ VFY+G+V LGGG I + Sbjct: 354 QAIVFYDGDVVLGGGRIAR 372 >UniRef50_C0WCT5 Putative uncharacterized protein n=1 Tax=Acidaminococcus sp. D21 RepID=C0WCT5_9FIRM Length = 357 Score = 465 bits (1196), Expect = e-129, Method: Composition-based stats. Identities = 145/364 (39%), Positives = 200/364 (54%), Gaps = 17/364 (4%) Query: 7 KVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDD---GEEYCTAAADLADAQAVCD 63 K ++ MSGGVDSSV+A L+ QGY+ G MK + D + C + D+ DA++V Sbjct: 2 KALIAMSGGVDSSVAAKLMLDQGYECVGCTMKLYNNPDAGCSSKTCCSIRDVEDARSVAV 61 Query: 64 KLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGADY 123 +LG+ N+ E+ +V E F Y G+TPNP I CNK +KF A E A E LG D Sbjct: 62 RLGMPYFVFNYMDEFRRDVMETFARSYTLGKTPNPCIDCNKFLKFGALYERAKE-LGCDT 120 Query: 124 IATGHYVRRADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQVRKIAE 183 I TGHY R +G LLR D KDQSY LY L+ EQ+A + FP+G+ EK R+IAE Sbjct: 121 IVTGHYARIRKRNGCYELLRAKDPKKDQSYVLYNLTQEQLAHTQFPLGDYEKTHTREIAE 180 Query: 184 DLGLVTAKKKDSTGICFIGERKFREFLGRYL--PAQPGKIITVDGDEIGEHQGLMYHTLG 241 + G + + K DS ICF+ + E + R L QPG +T+DG EIG H+G++Y+T+G Sbjct: 181 ESGFINSHKPDSQDICFVPNGTYTEAVQRILSYEPQPGPFLTLDGKEIGTHKGIIYYTIG 240 Query: 242 QRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLHWVDREPFT 301 Q K LG+ P YV+ D + N ++V L ++ +W+ + Sbjct: 241 QHKKLGLPQPD----GPLYVIAIDPKKNAVIVGPSQ---ALFRRDAAVKEANWISGKVPD 293 Query: 302 GTMRCTVKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTPGQSAVFY----NGEVCLGG 357 C VK RYRQ P V D ++FDEP A+TPGQSAV Y +V +GG Sbjct: 294 APFACLVKVRYRQEAQPAIVTPTGSDTFSILFDEPQRAITPGQSAVLYGLGDETDVVIGG 353 Query: 358 GIIE 361 GI++ Sbjct: 354 GILQ 357 >UniRef50_B5ZBP8 tRNA-specific 2-thiouridylase mnmA n=43 Tax=Bacteria RepID=MNMA_UREU1 Length = 380 Score = 463 bits (1193), Expect = e-129, Method: Composition-based stats. Identities = 176/374 (47%), Positives = 239/374 (63%), Gaps = 19/374 (5%) Query: 3 ETAKKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWE----------EDDGEEYCTAA 52 T K+V++G+SGGVDSSVSA LL+QQGY+V GLFM NW+ D + C + Sbjct: 4 NTKKRVVIGLSGGVDSSVSALLLKQQGYEVIGLFMANWDTVANFENNRESDKKHQGCESE 63 Query: 53 ADLADAQAVCDKLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFL 112 D DAQAV K+GI L+ V F EYW+NVFE FL+EY+ RTPNPDILCN+ IKF +FL Sbjct: 64 LDYQDAQAVAQKIGIPLYRVEFIKEYWNNVFEYFLSEYQKNRTPNPDILCNQFIKFDSFL 123 Query: 113 EFAAEDLGADYIATGHYVRRADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGE 172 +A +L ADYIA GHY + + S LL+ D NKDQ+YFL L Q+ +LFP+G+ Sbjct: 124 NYAKNELKADYIAMGHYAKVKHTNNLSYLLKATDVNKDQTYFLCNLKQTQLQNALFPIGD 183 Query: 173 LEKPQVRKIAEDLGLVTAKKKDSTGICFIGERKFREFLGRYLPAQPGKIIT-VDGDEIGE 231 L K QVR IA++ GLVTA KKDSTGICFIGER F+ FL Y+P QPG+I+ V+ +G Sbjct: 184 LTKQQVRTIAKEYGLVTANKKDSTGICFIGERNFKYFLENYIPNQPGEIVNIVNNQIVGH 243 Query: 232 HQGLMYHTLGQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQ-GHEHPRLMSVGLIAQ 290 H G MY+T+GQRKGL +G G E +V +KD+ I+ V+ E L+S + + Sbjct: 244 HMGTMYYTIGQRKGLNLG----GMNERMFVCEKDINKKIIYVSPLSLEDQYLISNQALVE 299 Query: 291 QLHWVDREPFTGTMRCTVKTRYRQTDIPCTVKALDDDRIEVIFD-EPVAAVTPGQSAVFY 349 ++++ EP+ + +V+ R+RQ + ++ V+ + EP A+TPGQ AVFY Sbjct: 300 NMNFI--EPYNPQIPISVRFRHRQNLVVVNSFLCIENTNNVLINYEPAKAITPGQYAVFY 357 Query: 350 NGEVCLGGGIIEQR 363 + C+GGG+I Q Sbjct: 358 QNDHCIGGGVIAQT 371 >UniRef50_C4ZB38 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase n=3 Tax=Firmicutes RepID=C4ZB38_EUBR3 Length = 362 Score = 463 bits (1191), Expect = e-129, Method: Composition-based stats. Identities = 143/368 (38%), Positives = 219/368 (59%), Gaps = 17/368 (4%) Query: 5 AKKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDD-----GEEYCTAAADLADAQ 59 KKV+VGMSGGVDSSV+A+LL++QGY V G+ M+ W+++D E C + + DA+ Sbjct: 2 KKKVVVGMSGGVDSSVAAYLLKEQGYDVIGVTMQIWQDEDVFKQSQEGGCCGLSAVEDAR 61 Query: 60 AVCDKLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDL 119 V L I + +NF A++ V + F++EY+ TPNP I CN+ +K+++ L + E + Sbjct: 62 RVAAVLDIPYYVMNFKADFKKYVIDYFVSEYERAYTPNPCIACNRYVKWESLLHRSLE-I 120 Query: 120 GADYIATGHYVRRADV-DGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQV 178 GADYIATGHY R A + +G+ + + + KDQ+Y LY L+ EQ+ ++L PVGE EKPQ+ Sbjct: 121 GADYIATGHYARIAQLPNGRYTIANSVTAEKDQTYALYNLTQEQLRRTLMPVGEYEKPQI 180 Query: 179 RKIAEDLGLVTAKKKDSTGICFIGERKFREFLGRYLPA--QPGKIITVDGDEIGEHQGLM 236 R+IAE+ GL A K DS ICF+ + + F+ +PG + G+ +G H+GL+ Sbjct: 181 RRIAEEAGLPVAHKSDSQDICFVPDHDYASFIENETGKTYEPGNFVDESGNILGRHKGLI 240 Query: 237 YHTLGQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLHWVD 296 ++T+GQRKGLGI P +V + N +V++ + L S ++++ Sbjct: 241 HYTIGQRKGLGITAAT-----PLFVKELRPATNEVVIST---NESLFSDTCYISDINYMA 292 Query: 297 REPFTGTMRCTVKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTPGQSAVFYNGEVCLG 356 +E T R K RY CT+ +++ I+ +FDEP A+TPGQ+AVFY L Sbjct: 293 QEHITPDTRSIGKVRYSHRGADCTLTPMENGMIKCVFDEPQRAMTPGQAAVFYQDGHVLC 352 Query: 357 GGIIEQRL 364 GG IE+ + Sbjct: 353 GGTIEKMM 360 >UniRef50_D0WIU4 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase n=1 Tax=Slackia exigua ATCC 700122 RepID=D0WIU4_9ACTN Length = 362 Score = 460 bits (1184), Expect = e-128, Method: Composition-based stats. Identities = 145/368 (39%), Positives = 206/368 (55%), Gaps = 19/368 (5%) Query: 6 KKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDD--------GEEYCTAAADLAD 57 K+V+VGMSGGVDSSV+A++L+QQGY+V G M+ D C + D+ D Sbjct: 3 KRVMVGMSGGVDSSVTAYVLKQQGYEVIGATMRLHGSDLPGRDARSCASRTCCSLDDVED 62 Query: 58 AQAVCDKLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAE 117 A++V +LGI T++F + D V + F+ Y+ RTPNP I CN+ +KF + LE A + Sbjct: 63 AKSVARRLGIAHRTIDFTDRFEDAVIKPFVRAYETARTPNPCIDCNRRLKFGSMLERALD 122 Query: 118 DLGADYIATGHYVRRADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQ 177 LG DY+ATGHY + + L+RG D++KDQSY LY+L+ Q+A +L P+G + K + Sbjct: 123 -LGCDYVATGHYAQIVRRGDRFALVRGADASKDQSYVLYSLTQYQLAHTLLPLGGMRKSE 181 Query: 178 VRKIAEDLGLVTAKKKDSTGICFIGERKFREFLGRYLP--AQPGKIITVDGDEIGEHQGL 235 VR IA + G + A K +S ICFI + + FL RY QPG+I G IG H G+ Sbjct: 182 VRAIAAEQGFINADKPESQDICFIPDGDYVGFLERYSGHTPQPGEIRDEAGAVIGRHSGI 241 Query: 236 MYHTLGQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLHWV 295 T+GQRKG+GI + P YVV KD ++ LVV L+S G +A +WV Sbjct: 242 ESFTVGQRKGIGIAAS-----GPLYVVAKDARDHALVVGPK---DSLLSDGCVADDWNWV 293 Query: 296 DREPFTGTMRCTVKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTPGQSAVFYNGEVCL 355 + VKT YRQT P V+ D + +++ P PGQ+ V Y G+ + Sbjct: 294 ADPEDLASFEVMVKTHYRQTPHPARVERRQDGTVRIVYASPARLAAPGQAVVVYQGDEVI 353 Query: 356 GGGIIEQR 363 GGG + Sbjct: 354 GGGTVAST 361 >UniRef50_O75648 Mitochondrial tRNA-specific 2-thiouridylase 1 n=19 Tax=Tetrapoda RepID=MTU1_HUMAN Length = 421 Score = 457 bits (1177), Expect = e-127, Method: Composition-based stats. Identities = 159/390 (40%), Positives = 221/390 (56%), Gaps = 36/390 (9%) Query: 6 KKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYCTAAADLADAQAVCDKL 65 + V+ +SGGVDS+V+A LL+++GYQV G+FMKNW+ D CTA D DA VC L Sbjct: 5 RHVVCALSGGVDSAVAALLLRRRGYQVTGVFMKNWDSLDEHGVCTADKDCEDAYRVCQIL 64 Query: 66 GIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGADYIA 125 I H V++ EYW++VF FL EY+ GRTPNPDI+CNK IKF F +A ++LGAD IA Sbjct: 65 DIPFHQVSYVKEYWNDVFSDFLNEYEKGRTPNPDIVCNKHIKFSCFFHYAVDNLGADAIA 124 Query: 126 TGHYVRRA-----------------------DVDGKSRLLRGLDSNKDQSYFLYTLSHEQ 162 TGHY R + +V +LL+ DS KDQ++FL +S + Sbjct: 125 TGHYARTSLEDEEVFEQKHVKKPEGLFRNRFEVRNAVKLLQAADSFKDQTFFLSQVSQDA 184 Query: 163 IAQSLFPVGELEKPQVRKIAEDLGL-VTAKKKDSTGICFIGERKFREFLGRYLPAQPGKI 221 + +++FP+G L K V+KIA + L +KK+S G+CFIG+R F FL +YL +PG Sbjct: 185 LRRTIFPLGGLTKEFVKKIAAENRLHHVLQKKESMGMCFIGKRNFEHFLLQYLQPRPGHF 244 Query: 222 ITV-DGDEIGEHQGLMYHTLGQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHP 280 I++ D +G H+G +TLGQR +G G EPWYVV+KD + VA +HP Sbjct: 245 ISIEDNKVLGTHKGWFLYTLGQRANIG------GLREPWYVVEKDSVKGDVFVAPRTDHP 298 Query: 281 RLMSVGLIAQQLHWVDREPF-----TGTMRCTVKTRYRQTDIPCTVKALDDDRIEVIFDE 335 L L ++HW+ EP M C + R++ +PC + D + V + Sbjct: 299 ALYRDLLRTSRVHWIAEEPPAALVRDKMMECHFRFRHQMALVPCVLTLNQDGTVWVTAVQ 358 Query: 336 PVAAVTPGQSAVFYNGEVCLGGGIIEQRLP 365 V A+ GQ AVFY G+ CLG G I + P Sbjct: 359 AVRALATGQFAVFYKGDECLGSGKILRLGP 388 >UniRef50_Q1IPC9 tRNA-specific 2-thiouridylase mnmA n=2 Tax=Bacteria RepID=MNMA_ACIBL Length = 370 Score = 456 bits (1174), Expect = e-127, Method: Composition-based stats. Identities = 137/379 (36%), Positives = 211/379 (55%), Gaps = 29/379 (7%) Query: 1 MSETAKKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEE----------DDGEEYCT 50 M+++ + + V MSGGVDSS A +L+ +GY + GL M+ W + + G C Sbjct: 1 MNKS-ETIAVAMSGGVDSSTVAAMLRAEGYNLVGLTMQLWNQRRLAHHEGFGEPGVGRCC 59 Query: 51 AAADLADAQAVCDKLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKA 110 + D+ DA+ V + L I + VN + +V + F+ +Y +GRTP P LCN +KF Sbjct: 60 SLDDVYDARRVAETLAIPYYVVNQEDRFERDVVKPFVEDYLSGRTPIPCSLCNNHLKFDQ 119 Query: 111 FLEFAAEDLGADYIATGHYVRR--ADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLF 168 L A+ +GA+ IATGHY R G+ L R D KDQ+YFL+ L+ EQ++++LF Sbjct: 120 LL-RTAQQIGAEKIATGHYARNDFNAQTGRWELKRPADRAKDQTYFLFGLTQEQLSRTLF 178 Query: 169 PVGELEKPQVRKIAEDLGLVTAKKKDSTGICFIGERKFREFLGRY-------LPAQPGKI 221 P+G KP+VR+ A++ GL +K DS ICFI +++FL Y LP G++ Sbjct: 179 PLGHKTKPEVREDAKNHGLKLFEKPDSQEICFIPNGDYKKFLDAYLEEQGESLPDTSGEL 238 Query: 222 ITVDGDEIGEHQGLMYHTLGQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPR 281 +T G+ +G H G+ T+GQRKGLG+ T P YV++ + +VV + Sbjct: 239 VTSSGEVVGHHTGIHNFTVGQRKGLGV-----ATGSPLYVIELRGDKRQVVVG---NNDE 290 Query: 282 LMSVGLIAQQLHWVDREPFTGTMRCTVKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVT 341 L++ L A++++W+ MR K R++ T++ DD + V FD+P AVT Sbjct: 291 LLTRNLRAKRMNWIAVSDLAQPMRVHAKIRHKHEPAWATIEKTGDDEVLVTFDDPQRAVT 350 Query: 342 PGQSAVFYNGEVCLGGGII 360 PGQ+ V Y+G+V +GGG I Sbjct: 351 PGQAVVLYDGDVVVGGGWI 369 >UniRef50_UPI00016B2149 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase n=1 Tax=candidate division TM7 single-cell isolate TM7c RepID=UPI00016B2149 Length = 340 Score = 456 bits (1173), Expect = e-127, Method: Composition-based stats. Identities = 163/355 (45%), Positives = 223/355 (62%), Gaps = 18/355 (5%) Query: 7 KVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYCTAAADLADAQAVCDKLG 66 KV VGMSGGVDSS++A LL ++G+ V G++MKNW +D C A DLADA+ V +LG Sbjct: 2 KVFVGMSGGVDSSLTAALLIERGHNVTGVYMKNWSQDLPGMKCPWADDLADAKRVAVQLG 61 Query: 67 IELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGADYIAT 126 I+L +F EY +NV E ++ Y G TPNPDI+CN+E+KFK FLE A D GAD IAT Sbjct: 62 IDLKVYDFEKEYRENVVEYMISAYSQGYTPNPDIMCNQEVKFKLFLETALAD-GADMIAT 120 Query: 127 GHYVRRADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQVRKIAEDLG 186 GHY D RL D+NKDQ+YFLY ++ + ++++ FP+GE K +VR+++ED Sbjct: 121 GHYATTRDN----RLFMASDANKDQTYFLYRVTSQALSKTFFPLGEYTKQKVRQMSEDRH 176 Query: 187 LVTAKKKDSTGICFIGERKFREFLGRYLPAQPGKIIT-VDGDEIGEHQGLMYHTLGQRKG 245 L TAKKKDS GICF+G+ REFL +Y+ +PG II G +IG H G +++T+GQR G Sbjct: 177 LFTAKKKDSQGICFVGKIGIREFLSQYVDTKPGDIIDQKTGKKIGTHDGAIFYTIGQRHG 236 Query: 246 LGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLHWVDREPFTGTMR 305 L IGG P+YVV K++++N + V+ H + + HW++ P G Sbjct: 237 LNIGGGL-----PYYVVGKNMQSNEVYVSNDINHNGIWRSETKIESKHWINNVPKDGNY- 290 Query: 306 CTVKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTPGQSAVFYNGEVCLGGGII 360 + R+R + T+ +VIFDEP A+ PGQS V Y+GE CLGGGII Sbjct: 291 -LARIRHRAPLVKITLLGS-----KVIFDEPQRAIAPGQSVVIYDGEECLGGGII 339 >UniRef50_B5DNY9 GA22395 n=14 Tax=Neoptera RepID=B5DNY9_DROPS Length = 387 Score = 455 bits (1171), Expect = e-126, Method: Composition-based stats. Identities = 151/376 (40%), Positives = 231/376 (61%), Gaps = 21/376 (5%) Query: 6 KKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYCTAAADLADAQAVCDKL 65 + ++VGMSGGVDS+VSA LL+++G++V G+FM+NW+E D C+ DL DA+ C +L Sbjct: 3 RNIVVGMSGGVDSAVSAHLLRERGHRVMGVFMRNWDEHDEAGRCSGEQDLKDAEWACQRL 62 Query: 66 GIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGADYIA 125 GIEL VN+ EYW VF FL +Y+ G TPNPDILCN+ IKF F A + LG D +A Sbjct: 63 GIELRQVNYVKEYWTAVFSAFLDDYQQGLTPNPDILCNRHIKFDLFHRHALDKLGYDAVA 122 Query: 126 TGHYVR--------RADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQ 177 TGHY R G++RLL D+ KDQ++FL + + + +++FP+G+L K + Sbjct: 123 TGHYARNSLGNFLEHRADGGEARLLIPADTFKDQTFFLAGIPRQALQRTMFPLGDLAKNE 182 Query: 178 VRKIAEDLGL-VTAKKKDSTGICFIGERKFREFLGRYLPAQPGKIITVD-GDEIGEHQGL 235 V+ +A +GL A K++STGICF+G+R F+ F+ Y+ ++ G+ + +D G +G H+G+ Sbjct: 183 VKLLARRIGLQRLAHKRESTGICFVGKRDFKSFIREYIASKSGQFVDIDSGAIVGSHEGI 242 Query: 236 MYHTLGQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLHWV 295 T+GQR LG +P++V K+ +N + VA GHEHP L+S + + +W+ Sbjct: 243 HQWTVGQRCRLG------SFLQPYFVARKEASSNTIYVAAGHEHPALLSTCIHIEAPNWL 296 Query: 296 DREPF-----TGTMRCTVKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTPGQSAVFYN 350 + G++RC + ++ + + C +++ D EV+ D P+ A+TPGQ AVFY+ Sbjct: 297 CVQSQQRLASAGSLRCRFRFQHTKPLVDCCLRSCPDGGFEVLLDIPLRAITPGQYAVFYD 356 Query: 351 GEVCLGGGIIEQRLPL 366 CLG G I PL Sbjct: 357 DVACLGAGRIMSAHPL 372 >UniRef50_A9SZR3 Predicted protein n=1 Tax=Physcomitrella patens subsp. patens RepID=A9SZR3_PHYPA Length = 421 Score = 455 bits (1171), Expect = e-126, Method: Composition-based stats. Identities = 168/377 (44%), Positives = 234/377 (62%), Gaps = 19/377 (5%) Query: 1 MSETAKKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWE--EDDGEEYCTAAADLADA 58 + E V VG+SGGVDSS++A LLQ+QGY+V G++M+NW+ ++ G +C+A D DA Sbjct: 33 LRERRGVVAVGISGGVDSSIAALLLQRQGYEVFGVYMRNWDARDEAGGGHCSADQDYEDA 92 Query: 59 QAVCDKL-GIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAE 117 Q VC+ L GI+LH +++ +YW VFE F ++ G TPNPD+ CN+ IKF A LE A + Sbjct: 93 QRVCEHLAGIKLHHLDYQKKYWTQVFENFTQKFAMGLTPNPDLDCNQHIKFDALLENALQ 152 Query: 118 DLGADYIATGHYVRRADV--DGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEK 175 +GAD ATGHY R + G +LLRG+D +KDQSYFL ++ + LFP+G L K Sbjct: 153 -MGADKFATGHYARLSRPQCGGPVQLLRGIDEDKDQSYFLASVGSAAFERVLFPLGGLTK 211 Query: 176 PQVRKIAEDLGLVTAKKKDSTGICFIGERKFREFLGRYLPAQPGKIITVDGDE-IGEHQG 234 QVR +A GLVTA K+ S GICF+G RKFR+F+ Y+ +PG + VDG+ +G H G Sbjct: 212 AQVRDLALSEGLVTATKRSSAGICFVGRRKFRDFISEYVEMEPGPFVCVDGNTHLGLHTG 271 Query: 235 LMYHTLGQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLHW 294 + +T GQR G+ G +P+YVV KDV+NN++ VA G +HP L +A W Sbjct: 272 IAAYTHGQRAGIS------GVPKPFYVVGKDVQNNVVYVAMGADHPALFCTSAVAGDPFW 325 Query: 295 VDREPFT-----GTMRCTVKTRYRQTDIPCTVKALDD-DRIEVIFDEPVAAVTPGQSAVF 348 + P + C K RYRQ+ CTV LD + + + F+EP A+TPGQ+ V Sbjct: 326 ISGSPPKQLQDGQPLTCMFKARYRQSLERCTVCFLDSKNEVAIRFEEPTRAITPGQALVL 385 Query: 349 YNGEVCLGGGIIEQRLP 365 Y+G+VCLG +I P Sbjct: 386 YDGDVCLGASVIAYPGP 402 >UniRef50_B7J5X6 tRNA-specific 2-thiouridylase mnmA n=3 Tax=Acidithiobacillus RepID=MNMA_ACIF2 Length = 352 Score = 454 bits (1170), Expect = e-126, Method: Composition-based stats. Identities = 143/359 (39%), Positives = 202/359 (56%), Gaps = 16/359 (4%) Query: 6 KKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYCTAAADLADAQAVCDKL 65 KK ++ +SGGVDS+V+A L+Q QGY++ G+ M+ W C D+ DA +C +L Sbjct: 4 KKALIALSGGVDSAVAALLMQGQGYELTGVTMRLWPRS----RCCDEKDIEDAAEICARL 59 Query: 66 GIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGADYIA 125 GI +++ + V ++F+AEY+AGRTPNP CN+ +KF A L E LGA +A Sbjct: 60 GIPYTVLDYREAFRRQVVDVFVAEYQAGRTPNPCARCNQFLKFDALL-AEGEKLGATMLA 118 Query: 126 TGHYVRRADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQVRKIAEDL 185 TGHY R A+ + LLRG D KDQSYFL+ + +++ FPVG + K +VR +A Sbjct: 119 TGHYARLAETSSGTALLRGRDHAKDQSYFLFAIGAGILSRLRFPVGGMNKDEVRAMARKH 178 Query: 186 GLVTAKKKDSTGICFIGERKFREFLGRYLP---AQPGKIITVDGDEIGEHQGLMYHTLGQ 242 GL A K+DS ICF+ + +R FL Y AQ G+++ G +G H G ++ T+GQ Sbjct: 179 GLPVAAKQDSQDICFVPDGDYRRFLEDYAGLDMAQEGEMVDSSGQVLGHHPGTLHFTVGQ 238 Query: 243 RKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLHWVDREPFTG 302 RKGLG G+++P YV+ D N ++V E L + + +W+ Sbjct: 239 RKGLG-----GGSDQPRYVLALDPAQNRVIVGGEDE---LYRGVVSLAECNWLTDLSPGE 290 Query: 303 TMRCTVKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTPGQSAVFYNGEVCLGGGIIE 361 T TVK RYR + L D R E+ F EP AVTPGQ+AV Y GE LGGG I+ Sbjct: 291 THAVTVKLRYRSRAESAMLHLLSDARAELRFREPQRAVTPGQAAVCYQGERLLGGGWIQ 349 >UniRef50_Q503J2 Mitochondrial tRNA-specific 2-thiouridylase 1 n=4 Tax=Euteleostomi RepID=MTU1_DANRE Length = 416 Score = 452 bits (1164), Expect = e-126, Method: Composition-based stats. Identities = 158/391 (40%), Positives = 207/391 (52%), Gaps = 36/391 (9%) Query: 6 KKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYCTAAADLADAQAVCDKL 65 + V+ MSGGVDSSVSA LL++ GY V G+FMKNW+ + + C++ D DA VC L Sbjct: 5 RHVVCAMSGGVDSSVSALLLKRMGYHVTGVFMKNWDSQEEKGLCSSDRDCEDAYKVCKML 64 Query: 66 GIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGADYIA 125 I H V++ EYW VF L EY+ GRTPNPDI+CNK IKFK F ++A LGAD +A Sbjct: 65 DIPFHEVSYVKEYWHEVFSNLLWEYERGRTPNPDIICNKHIKFKHFYQYAVNTLGADAMA 124 Query: 126 TGHYVRRADVD-----------------------GKSRLLRGLDSNKDQSYFLYTLSHEQ 162 TGHY R + D RL +G D KDQ++FL +S + Sbjct: 125 TGHYARTSQEDEEVFQQKLTEAPKSLFRDRFEIRKPVRLYQGADLLKDQTFFLSQISQDA 184 Query: 163 IAQSLFPVGELEKPQVRKIAEDLGL-VTAKKKDSTGICFIGERKFREFLGRYLPAQPGKI 221 + +LFP+ L K V+KIA + G KKK+S GICFIG+R F F+ YL +PG Sbjct: 185 LRHTLFPLAGLTKGYVKKIAAEAGFQHVLKKKESMGICFIGKRDFENFILEYLEPRPGNF 244 Query: 222 ITV-DGDEIGEHQGLMYHTLGQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHP 280 +++ DG +G+H+G TLGQR +G G + W+VVDKDV + V HP Sbjct: 245 VSIEDGQIMGKHKGWFTLTLGQRARIG------GRADAWFVVDKDVTTADVFVCPSTFHP 298 Query: 281 RLMSVGLIAQQLHWVDREPF-----TGTMRCTVKTRYRQTDIPCTVKALDDDRIEVIFDE 335 L L + HW+ EP T M C R PCTV D + V+ E Sbjct: 299 ALFRDTLQTDRFHWIAEEPPAELVHTQMMDCHFCFNNRMPLTPCTVTLNLDGSVWVMVKE 358 Query: 336 PVAAVTPGQSAVFYNGEVCLGGGIIEQRLPL 366 P+ + GQ AV Y G CLG G I + P Sbjct: 359 PMRGMATGQFAVLYKGHECLGSGKIIRLGPT 389 >UniRef50_Q3B625 tRNA-specific 2-thiouridylase mnmA n=10 Tax=Chlorobiaceae RepID=MNMA_PELLD Length = 367 Score = 449 bits (1157), Expect = e-125, Method: Composition-based stats. Identities = 155/375 (41%), Positives = 220/375 (58%), Gaps = 21/375 (5%) Query: 1 MSETAKKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYCTAAADLADAQA 60 M KKVIVG+SGGVDSSV+A +L ++GY+V GL +K +E DG + ++ Sbjct: 1 MERKKKKVIVGLSGGVDSSVAACMLVREGYEVLGLHLKVLQEGDGSTVLEPSPMTISSR- 59 Query: 61 VCDKLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLG 120 ++ I + T+N AA + + V + F EY A RTPNP ++CNK IK++ LE AA+ LG Sbjct: 60 --EEFHIPVFTLNLAARFRNEVMDYFKEEYLAARTPNPCMVCNKTIKWRGLLEGAAQ-LG 116 Query: 121 ADYIATGHYVRRADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQVRK 180 AD +ATGHY R A +DG+ RL GLD KDQSYFL+ L+ E++++++ P+G L KP+VR Sbjct: 117 ADMVATGHYARTAFIDGRHRLFAGLDRKKDQSYFLWMLAQEELSRTILPLGGLTKPEVRD 176 Query: 181 IAEDLGLVTAKKKDSTGICFIGERKFREFLGRYLP-----AQPGKIITVDGDEIGEHQGL 235 +A GL A+KK+S ICF+ + + +L +P + G+I+ G IG H+G Sbjct: 177 LARSFGLTAAEKKESQEICFVPDDDYGSYLESAVPGLHRRVEGGEILDPSGQVIGHHKGY 236 Query: 236 MYHTLGQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLHWV 295 ++T+GQR+GLG T EP YV D N++ L S + L+W+ Sbjct: 237 PFYTIGQRRGLG-----TATGEPLYVTAIDPIGNLVHTGPKS---ALFSTSVEVSHLNWI 288 Query: 296 DREPFTGTMRCTVKTRYRQTDIPCTVKALDDD----RIEVIFDEPVAAVTPGQSAVFYNG 351 +P M T K RYR PCT+ L ++F EP +A+TPGQ+AVFY G Sbjct: 289 GIDPPFAPMEATAKIRYRDHASPCTIIPLGPGPTGVTARIMFKEPKSALTPGQAAVFYRG 348 Query: 352 EVCLGGGIIEQRLPL 366 E LGGGIIE LP+ Sbjct: 349 EEVLGGGIIEGALPM 363 >UniRef50_C2KV29 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase n=6 Tax=Bacteria RepID=C2KV29_9FIRM Length = 362 Score = 448 bits (1153), Expect = e-124, Method: Composition-based stats. Identities = 133/366 (36%), Positives = 202/366 (55%), Gaps = 19/366 (5%) Query: 6 KKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDG----EEYCTAAADLADAQAV 61 +K ++ MSGGVDSSV+A L+Q++GY G+ MK ++ + G C D+ DA+ V Sbjct: 2 EKALIAMSGGVDSSVAAALMQEKGYDCIGITMKLYDSETGQACRSRTCCTLEDVEDARQV 61 Query: 62 CDKLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGA 121 L + + +NF ++ V F+ Y+ G TPNP I CN+ +K + A E+L Sbjct: 62 ASTLSMPFYVLNFKDDFQKKVILPFVETYENGGTPNPCIRCNRFMKHDKLYQRA-EELSC 120 Query: 122 DYIATGHYVRRA--DVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGEL-EKPQV 178 YI TGHY R + G+ L + D KDQSY LY LS EQ+A +LFP+GE K +V Sbjct: 121 SYIVTGHYARIEKDESSGRYLLKKAKDEKKDQSYVLYFLSQEQLAHTLFPLGEYSSKEEV 180 Query: 179 RKIAEDLGLVTAKKKDSTGICFIGERKFREFLGRYL--PAQPGKIITVDGDEIGEHQGLM 236 R+IA+ G + + K DS ICF+ + +FL ++ P G + +G ++GEH+G + Sbjct: 181 REIADKYGFINSDKPDSQDICFVTNGDYGDFLEKFRGKPYPSGDFVDENGKKLGEHRGTV 240 Query: 237 YHTLGQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLHWVD 296 +T+GQRKGLG+ K P YV K++E N +++ + + GL+A +W+ Sbjct: 241 RYTIGQRKGLGLSLKK-----PMYVSGKNIEKNQVIL---SDKEGIYFEGLLANDFNWIS 292 Query: 297 REPFTGTMRCTVKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTPGQSAVFYNGEVCLG 356 P T M KTRY +P V ++ + + F E AVT GQ+ V Y+G++ LG Sbjct: 293 L-PPTEDMAVEAKTRYNGKAVPAIVSVRENGDVFLRFPEKERAVTKGQAVVLYDGDLVLG 351 Query: 357 GGIIEQ 362 GG I + Sbjct: 352 GGTIVE 357 >UniRef50_A5FHA9 tRNA-specific 2-thiouridylase mnmA n=26 Tax=Bacteria RepID=MNMA_FLAJ1 Length = 395 Score = 447 bits (1151), Expect = e-124, Method: Composition-based stats. Identities = 167/400 (41%), Positives = 230/400 (57%), Gaps = 50/400 (12%) Query: 6 KKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDG--EEYCTAAADLADAQAVCD 63 K+V+VG+SGGVDSSV+A+LLQQQGY+V GLFMKNW +D C D DA V + Sbjct: 2 KRVVVGLSGGVDSSVAAYLLQQQGYEVIGLFMKNWHDDSVTISNECPWLEDSNDALLVAE 61 Query: 64 KLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGADY 123 KLGI TV+ + EY + + + EY+ GRTPNPD+LCN+EIKF F++ A LGADY Sbjct: 62 KLGIPFQTVDLSEEYKEKIVDYMFNEYEKGRTPNPDVLCNREIKFDVFMKIAL-SLGADY 120 Query: 124 IATGHYVRRAD--VDGK--SRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQVR 179 +ATGHY ++++ VDGK +L+ G D NKDQSYFL LS EQ++++LFP+G L KP+VR Sbjct: 121 VATGHYCQKSEIEVDGKTVYQLIAGNDVNKDQSYFLCQLSQEQLSKALFPIGALTKPEVR 180 Query: 180 KIAEDLGLVTAKKKDSTGICFIGERKFREFLGRYLPAQPGKIITVD-------------- 225 +IA ++ LVTA+KKDS G+CFIG+ + EFL + L + G I+ +D Sbjct: 181 EIAAEMELVTAEKKDSQGLCFIGKVRLPEFLQQKLQPKEGTIVQIDKNDPIYNVEKQAGL 240 Query: 226 -------------------GDEIGEHQGLMYHTLGQRKGLGIGGTKEGTEEPWYVVDKDV 266 G +G+HQG Y T+GQRKGL +GGT +P +V+ DV Sbjct: 241 SLEEELKIESQKLNYRPEMGKVMGKHQGAHYFTVGQRKGLNVGGTT----DPLFVIATDV 296 Query: 267 ENNILVVAQGHEHPRLMSVGLIA--QQLHWVDREPFTGT---MRCTVKTRYRQTDIPCTV 321 + N + HP L L ++HWV + M + RYRQ T+ Sbjct: 297 DTNTIYTGLTSNHPGLFKKALFVGNSEVHWVREDLKLKEGEQMEVMARIRYRQPLQKATL 356 Query: 322 KALDDDRIEVIFDEPVAAVTPGQSAVFYNGEVCLGGGIIE 361 + + V FDEP +A+T GQ +Y +G G+I Sbjct: 357 HQFANG-MYVHFDEPQSAITEGQFVAWYLENELVGSGVIS 395 >UniRef50_B0MKE4 Putative uncharacterized protein n=3 Tax=Clostridiales RepID=B0MKE4_9FIRM Length = 387 Score = 447 bits (1150), Expect = e-124, Method: Composition-based stats. Identities = 144/367 (39%), Positives = 218/367 (59%), Gaps = 21/367 (5%) Query: 5 AKKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEE--DDGEEYCTAAADLADAQAVC 62 A+K+ + MSGGVDSSV+ LL+ + Y+V G +K + D C +A+D+ DA+A+ Sbjct: 30 AEKLAIAMSGGVDSSVALVLLKDK-YEVSGYTLKLHDSRGTDDSGLCGSASDIEDAKAIA 88 Query: 63 DKLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGAD 122 K G+ + ++ + D V + F+ Y +GRTPNP + CN+ IKF A L+ A + G + Sbjct: 89 AKFGVPHYLLDMRDLFSDTVQKSFVQSYLSGRTPNPCVECNETIKFGALLD-AVKKQGIN 147 Query: 123 YIATGHYVRRADVDGKSRLL-------RGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEK 175 +IATGHYVR + R L G + KDQSY LY LS +Q+A S+FP+GE+ K Sbjct: 148 HIATGHYVRSCYDEKSGRWLLKKAINADGTSNAKDQSYVLYRLSQQQLAASVFPLGEMTK 207 Query: 176 PQVRKIAEDLGLVTAKKKDSTGICFIGERKFREFLGRYLPAQ--PGKIITVDGDEIGEHQ 233 ++R IA D GL+ + K DS ICF+ + + F+ RY G + +G+ IG H+ Sbjct: 208 DEIRHIAADSGLINSDKPDSQDICFVPDGDYAGFIERYTGNTYPDGDFLDENGNVIGRHK 267 Query: 234 GLMYHTLGQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLH 293 G++++T+GQR+G+G G +P YV+ K+ +NN + + + L + L A L+ Sbjct: 268 GVIFYTIGQRRGIG-----TGFGKPMYVIGKNADNNTVTLGS---NELLFTDTLYADNLN 319 Query: 294 WVDREPFTGTMRCTVKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTPGQSAVFYNGEV 353 W+ E +C KTRYRQT+ PCTV + + V+FDE + AVTPGQ VFY+G++ Sbjct: 320 WIAFEYPESEFKCRAKTRYRQTEQPCTVYPQGRNTVRVVFDEKIRAVTPGQHVVFYDGDI 379 Query: 354 CLGGGII 360 LGGG+I Sbjct: 380 VLGGGVI 386 >UniRef50_B4D711 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D711_9BACT Length = 363 Score = 446 bits (1147), Expect = e-124, Method: Composition-based stats. Identities = 138/370 (37%), Positives = 200/370 (54%), Gaps = 22/370 (5%) Query: 12 MSGGVDSSVSAWLLQQQGYQVEGLFMKNWEED---DGEEYCTAAADLADAQAVCDKLGIE 68 MSGGVDSSV+A+LL++QGY V G+ MK W +D E+ C +ADA+ V LG+ Sbjct: 1 MSGGVDSSVAAYLLKRQGYDVVGVTMKVWPQDCISRAEDKCCGPQAIADARGVAHALGVP 60 Query: 69 LHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGADYIATGH 128 + V+ + V + F EYK GRTPNP ++CN+++KF A+ LGA+YIATGH Sbjct: 61 HYVVDEGENFERLVIDYFTEEYKNGRTPNPCVMCNEKVKFGNL-WGKAKALGAEYIATGH 119 Query: 129 YVRRADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQVRKIAEDLGLV 188 Y ++ L +G D KDQSYFL++L Q+ ++ P+GE+ KP++R IA LGL Sbjct: 120 YAIIEHHADRAVLRKGRDPRKDQSYFLFSLRQAQLQHAICPLGEMSKPEIRAIARQLGLK 179 Query: 189 TAKKKDSTGICFIGERKFREFLGRYLPA---QPGKIITVDGDEIGEHQGLMYHTLGQRKG 245 A+K+DS ICF+ ++ FL ++ A PG I G+ + EH+G+ T+GQRKG Sbjct: 180 VAEKEDSQEICFVPGNDYKAFLKSHMGAGEFHPGGIYDKAGNRLAEHEGIEMFTIGQRKG 239 Query: 246 LGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLHWVDREPF----- 300 L G+ P YV+D D + ++V + L++ W Sbjct: 240 L-----PGGSPRPRYVIDIDPVTSSVIVGDAED---LITGEFTIDHCMWHPSTSLRAGGS 291 Query: 301 -TGTMRCTVKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTPGQSAVFYNGEVCLGGGI 359 T VK RY TV ++ V +P AVTPGQ+AV Y G+ LGGG Sbjct: 292 ATEPFEVNVKIRYGHAGADATVYPGENGEARVRLHKPQRAVTPGQAAVCYRGDEVLGGGW 351 Query: 360 IEQRLPL-PV 368 I +++ + PV Sbjct: 352 IVRQMAVEPV 361 >UniRef50_Q2LWA6 tRNA-specific 2-thiouridylase mnmA 1 n=1 Tax=Syntrophus aciditrophicus SB RepID=MNMA1_SYNAS Length = 372 Score = 445 bits (1145), Expect = e-123, Method: Composition-based stats. Identities = 133/362 (36%), Positives = 207/362 (57%), Gaps = 15/362 (4%) Query: 5 AKKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFM-KNWEEDDGEEYCTAAADLADAQAVCD 63 K+V++ +SGGVDSSV+A LL+++GY+V G+ M E++ + C + DA+ VC+ Sbjct: 20 KKRVLLAISGGVDSSVAALLLKEEGYEVAGVTMCLGVREEENKVRCCGREAIEDARGVCE 79 Query: 64 KLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGADY 123 LGI + +++A V + F+ EY+ GRTPNP I CN+ +KF L+ +A +G DY Sbjct: 80 ILGIPHYVLDYAPLLETCVIDKFVREYRLGRTPNPCIDCNRYLKFGHLLD-SARTMGFDY 138 Query: 124 IATGHYVRRADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQVRKIAE 183 +ATGHY + + + L + D KDQ+YFLY + + LFP+ + K +VR+IA Sbjct: 139 LATGHYAKIERKESRWILKKAKDLVKDQTYFLYPIPVAALEHILFPLADRTKDEVREIAR 198 Query: 184 DLGLVTAKKKDSTGICFIGERKFREFLGRY-LPAQPGKIITVDGDEIGEHQGLMYHTLGQ 242 L A+K +S +CF+ + +R+FL P PG I+ G +GEH G +++T+GQ Sbjct: 199 QALLPIAEKPESQDLCFVTQDSYRDFLQEQGCPVHPGPIVDRSGRVLGEHSGTVFYTIGQ 258 Query: 243 RKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLHWVDREPFTG 302 R GLGI + P YVV DV N ++V+ + + + GL+A +++W+ E Sbjct: 259 RHGLGIS-----SPFPLYVVAIDVAGNSVIVSGKED---VYAQGLVAGEMNWLTPE---R 307 Query: 303 TMRCTVKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTPGQSAVFYNGEVCLGGGIIEQ 362 + R+R+ C + + DRI V F E AVTPGQ+ V Y + LGGG+IE+ Sbjct: 308 PQEAEARIRHRKRTCSCRIVP-EGDRIRVYFAEDQDAVTPGQAVVLYQEDEVLGGGVIEE 366 Query: 363 RL 364 L Sbjct: 367 AL 368 >UniRef50_B5YCZ9 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase n=2 Tax=Dictyoglomus RepID=B5YCZ9_DICT6 Length = 345 Score = 444 bits (1143), Expect = e-123, Method: Composition-based stats. Identities = 145/359 (40%), Positives = 209/359 (58%), Gaps = 21/359 (5%) Query: 7 KVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYCTAAADLADAQAVCDKLG 66 KV VGMSGGVDSS +A+LL+++GY+V GL M D + DA+ + L Sbjct: 4 KVAVGMSGGVDSSTTAYLLKKEGYEVIGLTMNIAYSDS----------IKDAEKIAKYLN 53 Query: 67 IELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGADYIAT 126 I V+ E+ + + + F+ YK+G TPNP CN+ IKF L+ A ++LGA+Y+AT Sbjct: 54 IPHFYVDLRKEFEEQIIKYFIDSYKSGYTPNPCTFCNRIIKFGLLLKKA-QELGAEYLAT 112 Query: 127 GHYVRRADVDGKSR--LLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQVRKIAED 184 GHYVR+ + K L R D KDQSYFL L+ EQI +SLFP+G+L K +VRK+AE+ Sbjct: 113 GHYVRKVWDEEKKVFLLKRAKDLKKDQSYFLAYLTQEQIEKSLFPLGDLTKNEVRKLAEE 172 Query: 185 LGLVTAKKKDSTGICFIGERKFREFLGRYLPAQPGKIITVDGDEIGEHQGLMYHTLGQRK 244 +GL + K++S ICF+ +R +R+FL RYL + GKIIT DG E+G H G+ T+GQR+ Sbjct: 173 IGLFVSDKEESQDICFLPDRDYRKFLSRYLVEKKGKIITEDGVEVGYHDGVFSFTIGQRR 232 Query: 245 GLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLHWVDREPFTGTM 304 GL + K P YV E I+VVA + ++ S + A+ +++ P + Sbjct: 233 GLRVALGK-----PVYVKKIIPEEGIVVVA---DREKIFSREVYAKNVNYPSGMPREKEL 284 Query: 305 RCTVKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTPGQSAVFYNGEVCLGGGIIEQR 363 RY P +K L + I + F+EP A+TPGQ V Y + L GG+IE++ Sbjct: 285 EVKAMIRYNMEPQPALLKILSEKEIYLTFEEPQWAITPGQILVCYKDDYVLCGGVIEEK 343 >UniRef50_B7PXE7 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase, putative n=1 Tax=Ixodes scapularis RepID=B7PXE7_IXOSC Length = 384 Score = 444 bits (1142), Expect = e-123, Method: Composition-based stats. Identities = 152/373 (40%), Positives = 214/373 (57%), Gaps = 14/373 (3%) Query: 1 MSETAKKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYCTAAADLADAQA 60 M+ +KV+ GMSGGVDSSV+A+LL++ GY V G+FM+NW+ D + +C AD DA+ Sbjct: 1 MAWRFRKVVCGMSGGVDSSVAAFLLRKSGYDVTGVFMRNWDPHDADSHCDLDADETDAKW 60 Query: 61 VCDKLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLG 120 VCD LGI TV+F YW NVF L EY+ G TPNPDI+CN+ IKF AF A + G Sbjct: 61 VCDTLGIPFMTVDFVKPYWHNVFSPMLQEYQDGLTPNPDIMCNRVIKFGAFHRHAVKRFG 120 Query: 121 ADYIATGHYVRRADV-DGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQVR 179 AD +ATGHY R ++ DG LL+G+D KDQS+FL + + ++LFP+GE K QV+ Sbjct: 121 ADAVATGHYARIRNLPDGSVELLQGVDPVKDQSFFLSQVGQAALQRTLFPLGEATKGQVK 180 Query: 180 KIAEDLGLV-TAKKKDSTGICFIGERKFREFLGRYLPAQPGKIITVD-GDEIGEHQGLMY 237 +A LGL A KK+S G+CFIG++ F+ F+ +Y+ + G + ++ G +G H G+ Sbjct: 181 ALARSLGLHRVADKKESMGMCFIGKQDFQSFVEKYVEPKRGTFVDIETGKVVGSHSGVHA 240 Query: 238 HTLGQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLHWVDR 297 TLGQR LG G ++V ++VA G +HP L + HW+ Sbjct: 241 WTLGQRCRLG------GLRSAYFVARLCPITQQILVASGWDHPALRWREMRTGAPHWIRL 294 Query: 298 EPFTGT----MRCTVKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTPGQSAVFYNGE- 352 G RC K+++ +PCTV D + V+ D A++PGQ AVFY + Sbjct: 295 PLVGGGGPPLARCLFKSQHLDPPVPCTVAEGPDGGLAVLLDHHKRAISPGQFAVFYGEDS 354 Query: 353 VCLGGGIIEQRLP 365 C G I + P Sbjct: 355 QCFGSAKITELGP 367 >UniRef50_D0LWB4 tRNA(5-methylaminomethyl-2-thiouridylate)-methyl transferase n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LWB4_HALO1 Length = 391 Score = 443 bits (1140), Expect = e-123, Method: Composition-based stats. Identities = 130/370 (35%), Positives = 201/370 (54%), Gaps = 19/370 (5%) Query: 8 VIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGE----EYCTAAADLADAQAVCD 63 ++ +SGGVDS+V+A +L +QG++V G+ M+ ++ C D+ DA+ VC Sbjct: 7 IVAALSGGVDSAVTAAMLVEQGHRVVGMTMRLYDASGTSASVGGRCCGPRDIEDARRVCA 66 Query: 64 KLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGADY 123 LGI + VNF ++ V + F+ Y AG TPNP + CN+ IKF L A LGA+ Sbjct: 67 HLGIPFYVVNFEVDFAHTVIDDFVDTYLAGETPNPCVKCNQHIKFTPLLARA-RALGAET 125 Query: 124 IATGHYVRRADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQVRKIAE 183 +ATGHY R D RL RG D++KDQSYFL+++ E++A FP+G + K +VR A Sbjct: 126 VATGHYARLEDTGAGIRLRRGRDASKDQSYFLFSMPREELASVRFPLGAMTKDEVRDKAR 185 Query: 184 DLGLVTAKKKDSTGICFIGERKFREFLGRYL------PAQPGKIITVDGDEIGEHQGLMY 237 GL A K DS ICF+ + + F+ G I+ +G +G H+G+ + Sbjct: 186 AYGLPNAAKADSQEICFVPDGDYAGFVEAEALRRSRPVPASGDIVDGEGQVLGRHRGVHH 245 Query: 238 HTLGQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLHWVDR 297 +T+GQR+GLG T+ + P YV+ D + +VV + R + + + W+ Sbjct: 246 YTIGQRRGLGNLRTQTRSPTPLYVIGVDRARDRVVVGPREQAAR---RSVPVRDVRWLST 302 Query: 298 EPFTGTMRCTVKTRYRQTDIPCTVKALDDD-----RIEVIFDEPVAAVTPGQSAVFYNGE 352 P G + V+ RYR + +P T++ + R+ V FD+ +PGQ+AVFY+G+ Sbjct: 303 PPAEGRLSAGVQVRYRSSPLPATLELCGEGDERGKRVRVHFDDAAVIASPGQAAVFYDGD 362 Query: 353 VCLGGGIIEQ 362 LGGG I + Sbjct: 363 TVLGGGWIAR 372 >UniRef50_B1VAX7 tRNA-specific 2-thiouridylase mnmA n=4 Tax=Bacteria RepID=MNMA_PHYAS Length = 375 Score = 443 bits (1139), Expect = e-123, Method: Composition-based stats. Identities = 168/368 (45%), Positives = 228/368 (61%), Gaps = 14/368 (3%) Query: 6 KKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEE---------DDGEEYCTAAADLA 56 KKV+VG+SGGVDS+VSA LL++ GY+VE +FM+NW+ + C D Sbjct: 2 KKVVVGLSGGVDSAVSALLLKKAGYEVEAVFMRNWDSQLNFDFQGNPTLNDVCPQELDYK 61 Query: 57 DAQAVCDKLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAA 116 DA V +LGI+LH VNF EYW VF F+ +K TPNPDILCN EIKFKAF+ +A Sbjct: 62 DALKVSLQLGIKLHRVNFIEEYWQKVFLYFINAFKNNLTPNPDILCNNEIKFKAFINYAT 121 Query: 117 EDLGADYIATGHYVRRA-DVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEK 175 L YIA GHY R D + K L LD NKDQ+YFL L Q+ LFP+ +L K Sbjct: 122 SKLKPQYIAMGHYARLIYDKNQKVSLACPLDKNKDQTYFLSQLKTSQLKNILFPLADLTK 181 Query: 176 PQVRKIAEDLGLVTAKKKDSTGICFIGERKFREFLGRYLPAQPGKIITVDGDEIGEHQGL 235 +VRKIA + GL+ A KKDSTGICFIGER F +FL YLPAQ G I +DG + H+G+ Sbjct: 182 KEVRKIALENGLINACKKDSTGICFIGERNFFQFLNNYLPAQKGSIKRLDGTFLTYHKGV 241 Query: 236 MYHTLGQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLHWV 295 +++T+GQRK LG+G G +EP++VV K+++ N L V +HP L S + + W Sbjct: 242 IHYTIGQRKNLGLGNFSSG-QEPFFVVGKNLKTNTLYVEPNSQHPHLYSDRALIIDVTWR 300 Query: 296 DREPFTGTMRCTVKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTPGQSAVFYNGEVCL 355 + T + K RYRQ + T+ LD + +E+++ + + AVTPGQ FY+ ++CL Sbjct: 301 GEKTKT---QIQAKMRYRQPNQKVTLNWLDANTLEILYPQKIKAVTPGQICAFYDDDICL 357 Query: 356 GGGIIEQR 363 G G+I++ Sbjct: 358 GAGVIKEV 365 >UniRef50_C1XSA6 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase n=4 Tax=Deinococci RepID=C1XSA6_9DEIN Length = 371 Score = 441 bits (1134), Expect = e-122, Method: Composition-based stats. Identities = 148/368 (40%), Positives = 211/368 (57%), Gaps = 19/368 (5%) Query: 1 MSETAKKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEE---DDGEEYCTAAADLAD 57 M + +V+V MSGGVDSSVSA LL+ QGY+V G M+ W + DD E C + + Sbjct: 1 MLVSKGRVLVAMSGGVDSSVSAALLKAQGYEVIGAMMRFWPDNKKDDCFETCCSPDAAYE 60 Query: 58 AQAVCDKLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAE 117 A+ V D +G+ + +++ E+ + + + F+A Y AG TPNP + CN +KF + L+ A Sbjct: 61 ARRVADIVGVPFYLLDYREEFQEKIIDPFIAGYAAGETPNPCVNCNTRVKFDSLLKKA-R 119 Query: 118 DLGADYIATGHYVRRADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQ 177 LG D++ATGHYV R + L RG D KDQ+YFL+ E I +FPVG LEKPQ Sbjct: 120 MLGCDFVATGHYVIRE----GNALFRG-DPKKDQTYFLWGTPKEAIPHMMFPVGHLEKPQ 174 Query: 178 VRKIAEDLGLVTAKKKDSTGICFIGERKFREFLGRYLPAQPGKIITVD-GDEIGEHQGLM 236 VR IAE GL TAKK +S ICF+ + +EFL +L A+PG ++ ++ G+ IGEH G Sbjct: 175 VRAIAEQYGLPTAKKPESQNICFV-QGDLKEFLSNHLTARPGPLVDLETGEVIGEHAGAQ 233 Query: 237 YHTLGQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLHWVD 296 ++T+GQ+KGLG+ T YVV + N ++V + GL A++++ + Sbjct: 234 FYTVGQKKGLGLF----KTHLERYVVRVNPATNEVIVGPRE---ACLWSGLEAREVNLLV 286 Query: 297 REPFTGTMRCTVKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTPGQSAVFYNGEVCLG 356 V+ RYR + V+ L D + V EP AVTPGQS V Y G+ LG Sbjct: 287 EPEELPETL-EVQVRYRTKPVLGKVERLGDGGMTVRLAEPQFAVTPGQSMVLYQGDRLLG 345 Query: 357 GGIIEQRL 364 GG I++ L Sbjct: 346 GGFIQRPL 353 >UniRef50_C7N321 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase n=1 Tax=Slackia heliotrinireducens DSM 20476 RepID=C7N321_SLAHD Length = 353 Score = 439 bits (1131), Expect = e-122, Method: Composition-based stats. Identities = 144/361 (39%), Positives = 209/361 (57%), Gaps = 17/361 (4%) Query: 6 KKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDD---GEEYCTAAADLADAQAVC 62 ++V+VGMSGGVDSSV+A+LL +QGY+V G M ++ + + DL DA++V Sbjct: 3 QRVLVGMSGGVDSSVTAYLLLRQGYEVVGATMNLYDPGRLGVPDVRDGESNDLEDARSVA 62 Query: 63 DKLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGAD 122 ++LGI H ++F E+ +NV F Y G TPNP I CN+ +KF L+ AA +LG D Sbjct: 63 NRLGIAHHVLDFGCEFENNVVRPFAQAYADGLTPNPCIACNRHLKFGLMLK-AARELGCD 121 Query: 123 YIATGHYVRRAD-VDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQVRKI 181 IATGHY R A +DG+ L++GLD KDQ+Y LY ++ +Q+A ++ P+GE K QVR I Sbjct: 122 GIATGHYARIAQRLDGRFVLMKGLDDAKDQAYVLYHMTQDQLAHTVLPLGEYTKQQVRAI 181 Query: 182 AEDLGLVTAKKKDSTGICFIGERKFREFLGRYLP--AQPGKIITVDGDEIGEHQGLMYHT 239 A + G A+K +S ICF+ + + FL RY +PG ++ +G +G+H+G + +T Sbjct: 182 AAEQGFANARKHESQDICFVPDGDYVGFLERYAGLVPEPGDVLDENGAVLGQHRGAIRYT 241 Query: 240 LGQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLHWVDREP 299 LGQRKG+GI T+ YV KD+ N + + L++ G +W+ + Sbjct: 242 LGQRKGIGIASTQA-----LYVTAKDMAANTITMGP---ADALLADGCTVGNWNWILPD- 292 Query: 300 FTGTMRCTVKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTPGQSAVFYNGEVCLGGGI 359 G + VKT YRQ V +D + FDEP PGQSAV Y G+ LGGGI Sbjct: 293 -EGPVHAMVKTHYRQKPHGAMVVPQEDGTVRFDFDEPSRLAAPGQSAVAYIGDTVLGGGI 351 Query: 360 I 360 + Sbjct: 352 V 352 >UniRef50_B1AJ41 tRNA-specific 2-thiouridylase mnmA n=13 Tax=Mollicutes RepID=MNMA_UREP2 Length = 385 Score = 436 bits (1122), Expect = e-121, Method: Composition-based stats. Identities = 174/366 (47%), Positives = 229/366 (62%), Gaps = 19/366 (5%) Query: 11 GMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEE----------DDGEEYCTAAADLADAQA 60 G+SGGVDSSVSA LL+Q+GY+V GLFM NW+ + + C + D DAQA Sbjct: 12 GLSGGVDSSVSALLLKQEGYEVIGLFMSNWDTIANFENNHEFNKTHQGCESELDYQDAQA 71 Query: 61 VCDKLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLG 120 V K+GI L+ V F EYWDNVFE FL+EY+ RTPNPDILCN+ IKF +FL +A +L Sbjct: 72 VAQKIGIPLYRVEFIKEYWDNVFEYFLSEYQKNRTPNPDILCNQFIKFDSFLNYAKNELQ 131 Query: 121 ADYIATGHYVRRADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQVRK 180 ADYIA GHY R S LL+ +D+NKDQ+YFL L+ Q+ LFP+G L K QVR Sbjct: 132 ADYIAMGHYARVKHDRNSSFLLKAIDTNKDQTYFLCNLNQNQLQNVLFPIGHLTKLQVRA 191 Query: 181 IAEDLGLVTAKKKDSTGICFIGERKFREFLGRYLPAQPG-KIITVDGDEIGEHQGLMYHT 239 IA+ GL+TA KKDSTGICFIGER F+ FL Y+P QPG I V+ IG H G MY+T Sbjct: 192 IAKKHGLITANKKDSTGICFIGERNFKTFLQNYIPNQPGQIINIVNNQIIGHHIGTMYYT 251 Query: 240 LGQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGH-EHPRLMSVGLIAQQLHWVDRE 298 +GQRKGL +G G E +V DKD++ I+ VA E L+S + + ++++ E Sbjct: 252 IGQRKGLNLG----GMNERMFVCDKDIDKKIIYVAPSSFEKQYLISTQALIENINFI--E 305 Query: 299 PFTGTMRCTVKTRYRQTDIPC-TVKALDDDRIEVIFDEPVAAVTPGQSAVFYNGEVCLGG 357 P+ + V+ R+RQ I + + + +I E A+TPGQ AVFY + C+GG Sbjct: 306 PYNPQIPIMVRFRHRQDLIIVNDFLPIKNTKNVLINYESARAITPGQYAVFYQNDHCIGG 365 Query: 358 GIIEQR 363 GI+ + Sbjct: 366 GIVSKT 371 >UniRef50_Q2RZN9 tRNA-specific 2-thiouridylase mnmA n=11 Tax=Bacteroidetes RepID=MNMA_SALRD Length = 383 Score = 436 bits (1121), Expect = e-121, Method: Composition-based stats. Identities = 151/378 (39%), Positives = 201/378 (53%), Gaps = 24/378 (6%) Query: 1 MSETAKKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWE------EDDGEEYCTAAAD 54 MS+ +V+V MSGGVDSSV+A LL+++GY V GL MK W+ D E C + Sbjct: 1 MSKKG-RVLVAMSGGVDSSVTAVLLKERGYDVVGLTMKTWDYSTSGGRDGKEVGCCSIES 59 Query: 55 LADAQAVCDKLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEF 114 + DA+ V + G V+ E+ D V E F EY +GRTPNP +LCN IK+ A L+ Sbjct: 60 MNDARVVATEHGFPHFVVDLREEFGDWVIERFTDEYLSGRTPNPCVLCNTHIKWDALLQR 119 Query: 115 AAEDLGADYIATGHYV--RRADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGE 172 A +DL +YIATGHY R D + L RGLD NKDQSY L+ L E +A+S+FP+G Sbjct: 120 A-DDLDCEYIATGHYANVRYDDERDRYLLSRGLDRNKDQSYALWGLPQEHLARSIFPLGA 178 Query: 173 LEKPQVRKIAEDLGLV-TAKKKDSTGICFIGERKFREFLGRYLPAQP-----GKIITVDG 226 EKP++R++A + GL A K DS ICFI + + FL + G + DG Sbjct: 179 YEKPEIREMAAEFGLDNVADKPDSYEICFIPDNDYPRFLKDRVDGLEEEVSGGTFVLSDG 238 Query: 227 DEIGEHQGLMYHTLGQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVG 286 +GEH G ++T+GQR+GL + E YV D D E N + V E LM Sbjct: 239 TVVGEHDGYPFYTIGQRRGLDLALG-----ERVYVTDIDPETNTITVGPKEE---LMEQT 290 Query: 287 LIAQQLHWVDREPFTGTMRCTVKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTPGQSA 346 L A +++ V G RY C D+D ++V F EP A+TPGQS Sbjct: 291 LTAHEINLVKYPELDGERPAWGTIRYNDDGAGCLAWQPDEDTLKVAFAEPKRAITPGQSL 350 Query: 347 VFYNGEVCLGGGIIEQRL 364 V Y E LGGG I + Sbjct: 351 VLYEDEDVLGGGWIHEVG 368 >UniRef50_C9LN41 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase n=1 Tax=Dialister invisus DSM 15470 RepID=C9LN41_9FIRM Length = 350 Score = 434 bits (1116), Expect = e-120, Method: Composition-based stats. Identities = 143/369 (38%), Positives = 196/369 (53%), Gaps = 24/369 (6%) Query: 1 MSETAKKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYCTAAADLADAQA 60 M+E KKV+V MSGGVDS+++A LLQ+ GY V G M ++ D+ +AQ Sbjct: 1 MTEK-KKVVVAMSGGVDSTLTARLLQEAGYDVYGATMNQFDG----------QDMTEAQK 49 Query: 61 VCDKLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLG 120 + D LGI ++ Y D V F+ YK G TPNP ++C+ +IKF F + Sbjct: 50 IADFLGIPHKVIDVRKMYQDIVLSYFVDSYKNGITPNPCMMCDFKIKFGFFYDTVRAFFD 109 Query: 121 ADYIATGHYVRRADVD--GKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQV 178 Y ATGHY R K ++ + D KDQSY +Y L+ +Q+A LFP+G + K Sbjct: 110 CPYFATGHYARITYDGTRRKYQVEKATDLAKDQSYMMYHLTQDQLAHILFPLGRIYKKDT 169 Query: 179 RKIAEDLGLVTAKKKDSTGICFI-GERKFREFLGRYLPA--QPGKIITVDGDEIGEHQGL 235 R+I+E+ GL T K +S ICF+ E+ + EFL + P +PG I G +G H+GL Sbjct: 170 RRISEEKGLPTYNKAESQDICFLTSEKSYAEFLQNHAPEAFRPGNITDTKGRILGTHKGL 229 Query: 236 MYHTLGQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLHWV 295 ++T+GQRKGLGI + P YVV N ++V + L GL+A +L + Sbjct: 230 PFYTIGQRKGLGI-----ASRTPLYVVSLHAGKNRVIVGSNDD---LFRSGLLANELDFT 281 Query: 296 DREPFTGTMRCTVKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTPGQSAVFYNGEVCL 355 D P + RC K RY CTV + R V FDEP A+TPGQS VFY L Sbjct: 282 DGAPPSQQFRCRAKIRYGIHVHNCTVTLDNHGRAAVKFDEPQRAITPGQSVVFYEENRLL 341 Query: 356 GGGIIEQRL 364 GGG I + L Sbjct: 342 GGGTIMKVL 350 >UniRef50_B1ZZ32 tRNA-specific 2-thiouridylase mnmA n=3 Tax=Verrucomicrobia RepID=MNMA_OPITP Length = 378 Score = 434 bits (1116), Expect = e-120, Method: Composition-based stats. Identities = 161/377 (42%), Positives = 212/377 (56%), Gaps = 26/377 (6%) Query: 5 AKKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNW-EEDDGEEYCTAAADLADAQAVCD 63 A+K++V MSGGVDSSV+A LL+QQGY V G +MKNW ED +C D+ DA+ V Sbjct: 4 AEKILVAMSGGVDSSVAALLLKQQGYDVVGAYMKNWINEDQVIGHCPWQQDIEDARRVAT 63 Query: 64 KLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGADY 123 ++GIE VN EY + V L Y G TPNPDI+CN+E+KF F +A + G Sbjct: 64 QIGIEFRVVNLMREYRERVVAYLLDGYARGLTPNPDIMCNREVKFGVFRSWAKDH-GFAA 122 Query: 124 IATGHYVRRADV---------------DGKSR----LLRGLDSNKDQSYFLYTLSHEQIA 164 IATGHY +R +V DG LL G D NKDQSYFL LS EQ+ Sbjct: 123 IATGHYAQRVEVKPDLVTPAVLGGLNADGTPASTFALLEGADKNKDQSYFLALLSQEQLR 182 Query: 165 QSLFPVGELEKPQVRKIAEDLGLVTAKKKDSTGICFIGERKFREFLGRYLPAQPGKII-T 223 + FP+G L KP++R+IA + GL TA KKDS GICFIGE K ++FL Y+P PG I+ Sbjct: 183 DARFPIGHLPKPELRRIAREAGLATADKKDSQGICFIGEVKMQDFLRAYVPDAPGPIVRA 242 Query: 224 VDGDEIGEHQGLMYHTLGQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGH-EHPRL 282 DG E+G+H+GL ++TLGQRKG+GI + E + VV K + L+VA H + P L Sbjct: 243 TDGRELGQHRGLHFYTLGQRKGIGIPSNTD--HEAYVVVGKRAADRALLVAFDHPDAPGL 300 Query: 283 MSVGLIAQQLHWVDREPFTGTMRCTVKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTP 342 + L W+ +P T + RYR +P + + F P + Sbjct: 301 FQREVRVHALSWI-GKPVTTARALEGRVRYRDPRVPLEFVPESETTALIRFAAPQRGLAA 359 Query: 343 GQSAVFYNGEVCLGGGI 359 GQ FY+GE LGGG+ Sbjct: 360 GQILAFYDGERLLGGGV 376 >UniRef50_B0DQ81 Predicted protein n=4 Tax=Basidiomycota RepID=B0DQ81_LACBS Length = 370 Score = 433 bits (1115), Expect = e-120, Method: Composition-based stats. Identities = 141/374 (37%), Positives = 207/374 (55%), Gaps = 28/374 (7%) Query: 12 MSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDG---EEYCTAAADLADAQAVCDKLGIE 68 MSGGVDSSV+A+LL QQ Y + +FM+NW+ D ++ C D D Q VC KL + Sbjct: 1 MSGGVDSSVAAFLLAQQDYDLSAVFMRNWDTGDESGTDKGCEWEKDWEDVQRVCKKLDLP 60 Query: 69 LHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGAD---YIA 125 ++ + EYW+ VFE L ++++G TPN D+ CN+EIKF A LE ++ +IA Sbjct: 61 CQMIDLSQEYWNRVFEPSLKQWESGVTPNTDVWCNREIKFGALLERLPAPTTSNKKPWIA 120 Query: 126 TGHYVRRA--------DVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQ 177 TGHY R++ + +LLR D KDQ+Y+L ++S E ++++LFP+G L+K + Sbjct: 121 TGHYARKSWSTTPNSPHTRPRPKLLRPSDRGKDQTYYLSSISEEGLSRALFPIGHLQKSE 180 Query: 178 VRKIAEDLGLVTAKKKDSTGICFIGER-KFREFLGRYLPAQPGKIIT-VDGDEIGEHQGL 235 VR++A L TA++ DS GICF+GE+ KF FL Y+P PG ++ V G + +H GL Sbjct: 181 VRELARKHQLHTAERPDSVGICFVGEKAKFSNFLSSYIPPNPGPVVDQVSGKTLMQHAGL 240 Query: 236 MYHTLGQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLHWV 295 TLG+ + G +E +V KD +N + V G +H L S L W+ Sbjct: 241 WTFTLGENARI------PGMKERMFVSSKDQLSNTIYVVPGSDHEDLYSNTLRVSDFTWI 294 Query: 296 DREPF------TGTMRCTVKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTPGQSAVFY 349 + R + RYR +P TV+ + + V DEP AVTPGQ A Y Sbjct: 295 WNDAIPPDLSTPQGFRVDLMHRYRMHSVPSTVRKAETGDLIVTADEPEKAVTPGQIAALY 354 Query: 350 NGEVCLGGGIIEQR 363 +G+ CLG G+I+ Sbjct: 355 DGDWCLGCGVIKST 368 >UniRef50_B3RIL6 Putative uncharacterized protein n=1 Tax=Trichoplax adhaerens RepID=B3RIL6_TRIAD Length = 369 Score = 432 bits (1112), Expect = e-120, Method: Composition-based stats. Identities = 139/366 (37%), Positives = 207/366 (56%), Gaps = 13/366 (3%) Query: 1 MSETAKKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYCTAAADLADAQA 60 MS + + + V MSGGVDS+++A+LL++QG++V G+FMKNW+ + C D+ D Sbjct: 1 MSSSRQVIAVAMSGGVDSTIAAYLLRKQGHEVVGIFMKNWDITEETGICKTDEDMQDFIK 60 Query: 61 VCDKLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLG 120 C+ LGI VNF +YW +VF F+ YK G TPNPDI CN+ IKF ++ +E+LG Sbjct: 61 SCNHLGIPHKEVNFVQDYWHHVFSPFVNGYKQGITPNPDITCNRMIKFNKLRQYCSENLG 120 Query: 121 ADYIATGHYVRRADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQVRK 180 D +ATGHY + D K +L++ +D KDQ+YFL + + +FP+G L K +V+ Sbjct: 121 VDNLATGHYAQLV-TDSKPKLIQAVDEAKDQTYFLANVKKISLKNIMFPIGNLLKSEVKN 179 Query: 181 IAEDLGL-VTAKKKDSTGICFIGERKFREFLGRYLPAQPGKIITVDGDEIGEHQGLMYHT 239 +A +GL A KK+S G+CFIG+R F+ F+ Y+ Q + T+DG G+H L T Sbjct: 180 LALKIGLRKIATKKESMGVCFIGKRNFKTFISEYIENQEYDVNTIDGQNFGKHSNLSLST 239 Query: 240 LGQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLHWVD--- 296 +G+R +G G E WYVV KD ++ +A G HP L +W+ Sbjct: 240 IGERARIG------GMSERWYVVSKDSNRKVITLAPGINHPALYCRIFYVADANWISYCA 293 Query: 297 --REPFTGTMRCTVKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTPGQSAVFYNGEVC 354 + + C ++ R+ +PC +K + +EV + + AVTPGQ A FY+ C Sbjct: 294 EMQLSLRKELECHIRIRHLAPLVPCLIKLQYNGFLEVNSQQSLFAVTPGQFAAFYSRNEC 353 Query: 355 LGGGII 360 LGGG I Sbjct: 354 LGGGQI 359 >UniRef50_B3DUT9 tRNA(5-methylaminomethyl-2-thiouridine)-methyltransferase n=1 Tax=Methylacidiphilum infernorum V4 RepID=B3DUT9_METI4 Length = 367 Score = 432 bits (1112), Expect = e-120, Method: Composition-based stats. Identities = 132/366 (36%), Positives = 202/366 (55%), Gaps = 16/366 (4%) Query: 3 ETAKKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEE---DDGEEYCTAAADLADAQ 59 + +++VGMSGGVDS+V+A+LL+++G+ V G+ +K W + E C + DA+ Sbjct: 9 KKNTRIVVGMSGGVDSTVAAYLLKREGFDVVGITLKIWTDRCMHISSEKCCGPDAINDAR 68 Query: 60 AVCDKLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDL 119 + ++GI + ++ A + V FL EY GRTPNP + CN++IKF + Sbjct: 69 NMAAQIGIPHYVLDEADCFEKEVISYFLREYSLGRTPNPCVKCNEKIKFGRL-WTRVQSW 127 Query: 120 GADYIATGHYVRRADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQVR 179 G +Y+ATGHY + D RL + D +DQSYFL++LS Q+++ + P+G LEK +VR Sbjct: 128 GVEYLATGHYALVENQDHIPRLKKAKDKRRDQSYFLFSLSAGQLSRMITPLGNLEKKEVR 187 Query: 180 KIAEDLGLVTAKKKDSTGICFIGERKFREFLGRYLPA---QPGKIITVDGDEIGEHQGLM 236 IA++ GL K++S ICF+ + ++EF+ G II +G IGEHQG+ Sbjct: 188 AIAKEAGLNVWNKEESRDICFVPGKNYKEFIQGKKTPSNTHSGFIIDEEGKVIGEHQGIE 247 Query: 237 YHTLGQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLHWVD 296 +T+GQRKGL G P YVVD D E+ + L A Q HW++ Sbjct: 248 GYTVGQRKGL-----PGGQGRPLYVVDIDPESKTIRAGS---LKSLFKTHCYASQAHWIE 299 Query: 297 REPFTGTMRCTVKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTPGQSAVFYNGEVCLG 356 ++ TVK RY ++ + L DR + F P ++PGQ+AV Y+G++ LG Sbjct: 300 KD-IESPRPVTVKLRYNYPEVEALLTLLGKDRFRLDFSSPQMGISPGQAAVCYDGDIVLG 358 Query: 357 GGIIEQ 362 GG IE+ Sbjct: 359 GGWIER 364 >UniRef50_UPI000197B781 hypothetical protein BACCOPRO_02286 n=1 Tax=Bacteroides coprophilus DSM 18228 RepID=UPI000197B781 Length = 361 Score = 432 bits (1112), Expect = e-120, Method: Composition-based stats. Identities = 138/363 (38%), Positives = 209/363 (57%), Gaps = 19/363 (5%) Query: 2 SETAKKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYCTAAADLADAQAV 61 E KV++GMSGG DSSV+A LLQ GY+V G+ + +E+D EY L DA+ + Sbjct: 10 MEKNNKVLLGMSGGTDSSVAAMLLQDAGYEVTGITFRFYEKDFQTEY------LEDARHL 63 Query: 62 CDKLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGA 121 C++LGI T + + + + F+ EY GRTP P LCN ++K+ L+ A+ G Sbjct: 64 CEQLGIRHLTYDAREVFEEQIIHYFIQEYMNGRTPVPCTLCNNQLKWP-LLKEIADREGI 122 Query: 122 DYIATGHYVRRADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQVRKI 181 ++ATGHYVR+ V+G+ + G D +KDQS+FL+ L + + ++LFP+GEL K +VR+I Sbjct: 123 YHLATGHYVRKQTVNGRWFIRSGADPDKDQSFFLWGLPQDLLERALFPMGELTKVRVREI 182 Query: 182 AEDLG-LVTAKKKDSTGICFIGERKFREFLGRYLPA---QPGKIITVDGDEIGEHQGLMY 237 A + G L A+K+DS G+CF +R FL ++P PG+ + +G ++G+H+G + Sbjct: 183 AAERGQLKAARKRDSLGVCFCP-MDYRTFLKSHVPEGQISPGEFLDEEGRKLGQHEGYPF 241 Query: 238 HTLGQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLHWVDR 297 +T+GQR+GLGI K +V + E N ++V L ++ + +D Sbjct: 242 YTIGQRRGLGIWLNKT-----LFVKETLPEQNRVIVCD--NLRALEKQEMLLTDWNLIDP 294 Query: 298 EPFTGTMRCTVKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTPGQSAVFYNGEVCLGG 357 E VK RYR+ CTV D + V EP+A+V PGQ+AVFY ++ LGG Sbjct: 295 ETALNHPDVIVKIRYRKQANRCTVTCTGDGCLHVNLHEPLASVAPGQAAVFYRDDLVLGG 354 Query: 358 GII 360 GII Sbjct: 355 GII 357 >UniRef50_Q057R1 tRNA-specific 2-thiouridylase mnmA n=6 Tax=Enterobacteriaceae RepID=MNMA_BUCCC Length = 373 Score = 432 bits (1112), Expect = e-120, Method: Composition-based stats. Identities = 182/361 (50%), Positives = 243/361 (67%), Gaps = 4/361 (1%) Query: 11 GMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYCTAAADLADAQAVCDKLGIELH 70 MSGGVDSSVSAWLL +QGYQVEGLFMKNW+EDD +YC++ D D + VC L I LH Sbjct: 13 AMSGGVDSSVSAWLLLKQGYQVEGLFMKNWDEDDSNDYCSSKIDFNDVKKVCKTLNIPLH 72 Query: 71 TVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGADYIATGHYV 130 T+NF+ EYW+NVF FL E+K G TPNPDILCNK IKF L+F+ + L +DY ATGHY Sbjct: 73 TINFSEEYWENVFLNFLKEHKKGNTPNPDILCNKIIKFNICLKFSLKYLKSDYFATGHYA 132 Query: 131 RRADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQVRKIAEDLGLVTA 190 + L R D KDQSYFLYTL + +++ +FP+ +K ++RKIA+ + L Sbjct: 133 KIKKTKKNFYLYRAHDKKKDQSYFLYTLKSKILSKIIFPLAYFKKKKIRKIAKKIKLSVY 192 Query: 191 KKKDSTGICFIGERKFREFLGRYLPAQPGKIITVDGDEIGEHQGLMYHTLGQRKGLGIGG 250 KKKDSTGICFI +KF FL +Y+P + GKI+T+ + +G H G ++T+GQRKGL IGG Sbjct: 193 KKKDSTGICFIQPKKFNSFLKQYIPQKIGKILTMSKEFLGLHLGYEFYTIGQRKGLNIGG 252 Query: 251 TKEGTEE-PWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLHWVDREPFTGTMRCTVK 309 K+ PWYVV KD+ NI+ V QG +P L+S G + +++H+++ F +C V+ Sbjct: 253 KKKKKNAYPWYVVKKDIYLNIIFVVQGLRNPYLLSYGFLTKKIHYINDNIFYFKKKCVVQ 312 Query: 310 TRYRQTDIPCTVKALD--DDRIEVIFDEPVAAVTPGQSAVFYNGEVCLGGGIIEQRLP-L 366 +YRQ I C + ++ I+VIF +P+ VTPGQSAVFY CLGG II++ +P L Sbjct: 313 IKYRQEPIICEFFKISKKNNYIKVIFKKPILYVTPGQSAVFYLKNKCLGGSIIKKNIPYL 372 Query: 367 P 367 P Sbjct: 373 P 373 >UniRef50_UPI00016C4B95 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase n=1 Tax=Gemmata obscuriglobus UQM 2246 RepID=UPI00016C4B95 Length = 357 Score = 432 bits (1111), Expect = e-119, Method: Composition-based stats. Identities = 150/366 (40%), Positives = 213/366 (58%), Gaps = 26/366 (7%) Query: 7 KVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNW--------EEDDGEEYCTAAADLADA 58 +V++ MSGGVDSS SA LL++QG++V GLFM+ E D ++ C +A D DA Sbjct: 3 RVVLAMSGGVDSSASAVLLKKQGHEVIGLFMRTGTHGHDQPDERRDNKKGCCSAIDAGDA 62 Query: 59 QAVCDKLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAED 118 + V DKL I + ++F +E+ + + + F EY GRTPNP ++CN +KF F + Sbjct: 63 RRVADKLDIPFYALDFESEF-NRIIDYFADEYVRGRTPNPCVVCNNWLKFGQLWTF-GQK 120 Query: 119 LGADYIATGHYVRRADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQV 178 LGAD+IATGHY + + L +G+D++KDQSY L+ + E + LFPVG KPQ+ Sbjct: 121 LGADFIATGHYAQVRN----GELHKGVDADKDQSYVLHGIKREVLPHLLFPVGGYTKPQI 176 Query: 179 RKIAEDLGLV-TAKKKDSTGICFIGERKFREFLGRYLP--AQPGKIITVDGDEIGEHQGL 235 R+ A + LV A+K DS ICF+ + + P A G I DG +G+H G+ Sbjct: 177 RQFAREASLVGVAEKPDSVEICFVPSGNHTDVVRARRPGAATAGVIAERDGTVLGDHDGI 236 Query: 236 MYHTLGQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLHWV 295 +T+GQRKGL IGG K+ +V++ E N +VV + L+S GL+A ++W+ Sbjct: 237 DRYTIGQRKGLNIGGGKK-----RFVLELLAETNTVVVGDESD---LLSSGLVASGMNWL 288 Query: 296 DREPFTGTMRCTVKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTPGQSAVFYNGEVCL 355 +P T + C K RYR +P TV AL D EV+FD P AVTPGQ+ Y+G L Sbjct: 289 -IDPPTEPLTCVAKIRYRHAGVPATVTALPDGGAEVVFDAPQPAVTPGQALALYDGTRVL 347 Query: 356 GGGIIE 361 GGG IE Sbjct: 348 GGGWIE 353 >UniRef50_B8P9F0 Predicted protein n=1 Tax=Postia placenta Mad-698-R RepID=B8P9F0_POSPM Length = 356 Score = 431 bits (1110), Expect = e-119, Method: Composition-based stats. Identities = 138/362 (38%), Positives = 198/362 (54%), Gaps = 23/362 (6%) Query: 12 MSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDG---EEYCTAAADLADAQAVCDKLGIE 68 MSGGVDSSV A LL +Q Y + +FM+NW+ D ++ C D D Q VC L I Sbjct: 1 MSGGVDSSVVAKLLAEQDYDLSAVFMRNWDTRDESGTDKGCEWEKDWEDVQRVCKMLDIP 60 Query: 69 LHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGAD-YIATG 127 V+ + +YW VFE L ++ G+TPNPDI CN+E+KF A ++ G D ++ATG Sbjct: 61 CEMVDLSQQYWTRVFEPSLQLWEKGQTPNPDIWCNREVKFGALMDQLT---GDDVWVATG 117 Query: 128 HYVRRADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQVRKIAEDLGL 187 HY ++ KS L R D KDQ+Y+L + +A+++FP+ K +VR +A+ L Sbjct: 118 HYADKSWFPCKS-LRRPRDRTKDQTYYLSAIPEASLARTIFPLAPFAKTEVRAMAKKWEL 176 Query: 188 VTAKKKDSTGICFIGE-RKFREFLGRYLPAQPGKIITVD-GDEIGEHQGLMYHTLGQRKG 245 TA++ +S GICF+GE R+F FL +Y+ + G II + G ++G H GL +T+GQ Sbjct: 177 PTAQRAESMGICFVGEKRRFDGFLSQYITPRQGPIIDLQTGKQLGTHTGLWTYTIGQNAR 236 Query: 246 LGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLHWVDREPFTGTMR 305 L G E +V KD E N + V HP L S LIA W+ R+ G + Sbjct: 237 L------PGMPERMFVAKKDAERNEIYVVPSSTHPALYSRSLIASAWQWIWRDHPPGGID 290 Query: 306 CT------VKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTPGQSAVFYNGEVCLGGGI 359 V+ R+R D P T++ I + F+EP +V PGQ A ++G+ CLG GI Sbjct: 291 DELGFHGRVQYRHRMLDAPATIQRRG-HTIHITFEEPQQSVAPGQIAAVWDGDWCLGSGI 349 Query: 360 IE 361 I Sbjct: 350 IT 351 >UniRef50_B9CP36 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase n=1 Tax=Atopobium rimae ATCC 49626 RepID=B9CP36_9ACTN Length = 389 Score = 431 bits (1108), Expect = e-119, Method: Composition-based stats. Identities = 147/386 (38%), Positives = 203/386 (52%), Gaps = 31/386 (8%) Query: 1 MSETAKKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYCTAAADLADAQA 60 M + KV +GMSGGVDS++SA LL +QG+ V ++M+NW +D +C A DLADA+ Sbjct: 1 METSMDKVYLGMSGGVDSALSAALLLEQGFDVHAVYMRNWSKDLPGFHCPWADDLADAER 60 Query: 61 VCDKLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLG 120 V LGI+L + EY + V + L Y G TPNPD++CN+ +KF F + A + G Sbjct: 61 VAVSLGIDLAVWDCEKEYKETVVDYLLDSYAHGYTPNPDVMCNQTVKFGTFAKRAFSE-G 119 Query: 121 ADYIATGHYVRR----------------------ADVDGKSRLLRGLDSNKDQSYFLYTL 158 ADYIATGHY R G S L+R D +KDQ+YFL+ + Sbjct: 120 ADYIATGHYARLASGEKNACGGDDANNTTGMAGAMHGSGTSCLMRAADEHKDQTYFLWRV 179 Query: 159 SHEQIAQSLFPVGEL-EKPQVRKIAEDLGLVTAKKKDSTGICFIGERKFREFLGRYLPAQ 217 E +++FP+G++ K +VR + D GL K DS GICFIG R FL + Sbjct: 180 PSEIFDRTIFPIGDIPTKAEVRAMCADRGLGIENKPDSDGICFIGPVGLRTFLLDAFERK 239 Query: 218 PGKIITVD-GDEIGEHQGLMYHTLGQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQG 276 G II + G ++GEH G T+GQRKGL +GG YVV D N + V Sbjct: 240 TGDIIEWESGKKLGEHDGAFLFTIGQRKGLSVGGGPA-----HYVVATDTNTNTVYVTSD 294 Query: 277 HEHPRLMSVGLIAQQLHWVDREPFTGTMRCTVKTRYRQTDIPCTVKALDDDRIEVIFDEP 336 L + + HW+ TV+TR+ PC + + + + ++ P Sbjct: 295 PLSAALWTKTMDIVDTHWISGCVPADGA-YTVRTRHTGELRPCMLTKVSATTMRITYEVP 353 Query: 337 VAAVTPGQSAVFYNGEVCLGGGIIEQ 362 V V PGQSAVFY+G VC+GGGIIE+ Sbjct: 354 VRTVAPGQSAVFYDGLVCIGGGIIER 379 >UniRef50_Q4A7U1 tRNA-specific 2-thiouridylase mnmA n=5 Tax=Mollicutes RepID=MNMA_MYCH7 Length = 372 Score = 429 bits (1105), Expect = e-119, Method: Composition-based stats. Identities = 158/366 (43%), Positives = 225/366 (61%), Gaps = 22/366 (6%) Query: 7 KVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEE-----------DDGEEYCTAAADL 55 K++VG+SGGVDS+VSA+LL++ G+ V +FM+NW+ + C D Sbjct: 3 KIVVGLSGGVDSAVSAYLLKKAGHNVIAVFMRNWDSSLNNDFLGKKNEKNFTICPQEQDW 62 Query: 56 ADAQAVCDKLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFA 115 DA+ V +L I + ++F EYWD VF + +Y++G TPNPDILCNK IKFK FL++A Sbjct: 63 LDAKVVAKQLNIPIFRIDFIKEYWDEVFSDLILKYQSGLTPNPDILCNKNIKFKHFLDYA 122 Query: 116 AEDLGADYIATGHYVRRADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEK 175 + AD+IA GHY + + + L G DS KDQSYFL LS Q+ +++FP+G L K Sbjct: 123 QKVHNADFIAMGHYAKTDNGN----LYAGADSLKDQSYFLGQLSKSQLQKTIFPLGNLLK 178 Query: 176 PQVRKIAEDLGLVTAKKKDSTGICFIGERKFREFLGRYLPAQPGKIITVDG-DEIGEHQG 234 +VRKIA +LGL+ AKKKDSTGICFIGERKF +FL Y+PAQPG II + +G+H G Sbjct: 179 SEVRKIANELGLINAKKKDSTGICFIGERKFTDFLQNYIPAQPGNIIDISTKKVLGKHIG 238 Query: 235 LMYHTLGQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLHW 294 +MY T+GQRKG G+ G +EP++VV +++ IL V+ E L S L+A+ ++ Sbjct: 239 IMYFTIGQRKGFGLS----GMKEPYFVVGHNLKEKILYVSPQSEKKWLESDSLMAKNANF 294 Query: 295 VDREPFTGTMRCTVKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTPGQSAVFYNGEVC 354 + E F + K RYRQ IP ++ + D+ + + + A+TPGQ V Y+ Sbjct: 295 LS-ENFRNLDNLSAKFRYRQEAIPIRIEKIQDNSFWISY-QKYQAITPGQQVVIYHQNQV 352 Query: 355 LGGGII 360 + G I Sbjct: 353 ILAGEI 358 >UniRef50_D1BMF0 tRNA(5-methylaminomethyl-2-thiouridylate)-methyl transferase n=3 Tax=Veillonella RepID=D1BMF0_VEIPT Length = 353 Score = 429 bits (1105), Expect = e-119, Method: Composition-based stats. Identities = 140/362 (38%), Positives = 211/362 (58%), Gaps = 16/362 (4%) Query: 6 KKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYCTAAADLADAQAVCDKL 65 K + V MSGGVDSS++A +L +QGY+V G+ + W G Y + DA+ +CD L Sbjct: 3 KVIAVAMSGGVDSSLTAAMLLKQGYKVFGITL--WLWVSGTPYDEVPLAVTDAKKMCDFL 60 Query: 66 GIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGADYIA 125 GIE H ++ +++NV + F+ EY GRTPNP + CNK IKF L A E LGA ++ Sbjct: 61 GIEHHVIDARDVFYENVVDYFVKEYAYGRTPNPCVFCNKNIKFDLMLNRALE-LGATHMV 119 Query: 126 TGHYVRRA--DVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQVRKIAE 183 TGHY + + G L +G+D KDQSY +Y ++ ++ +FP+G K + RK+A Sbjct: 120 TGHYAQVNYNEETGLYELHKGVDPTKDQSYVMYNMNQRILSHLMFPLGGQCKTETRKLAA 179 Query: 184 DLGLVTAKKKDSTGICFIGERKFREFLGRYLPAQP--GKIITVDGDEIGEHQGLMYHTLG 241 + L AKK DS ICF+ +++ + + +P G I+T DG+ +G+H GL +T+G Sbjct: 180 EYDLPVAKKPDSVDICFLPHGNYQKLVVEEMKGKPESGNIVTEDGEVLGKHNGLFNYTIG 239 Query: 242 QRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLHWVDREPFT 301 QRKGLGI + P YV+ + + N ++V + RL + +I + +++D + Sbjct: 240 QRKGLGI-----AYKHPLYVIGFNGDRNEVIVGP---NERLFTNRMICKFYNFLD-DTIH 290 Query: 302 GTMRCTVKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTPGQSAVFYNGEVCLGGGIIE 361 ++ K RY PCT + LDDD +EVIF+EP A+TPGQS FYNG LGG +I+ Sbjct: 291 KELKAEGKIRYAANPSPCTARILDDDTMEVIFEEPQRAITPGQSVAFYNGTQLLGGAVID 350 Query: 362 QR 363 + Sbjct: 351 RV 352 >UniRef50_A6KZ28 tRNA-specific 2-thiouridylase mnmA 2 n=10 Tax=Bacteroides RepID=MNMA2_BACV8 Length = 351 Score = 429 bits (1104), Expect = e-119, Method: Composition-based stats. Identities = 132/363 (36%), Positives = 202/363 (55%), Gaps = 20/363 (5%) Query: 2 SETAKKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYCTAAADLADAQAV 61 +E+ KV++GMSGG DSSV+A LLQ GY+V G+ + +E+++ EY L DA+A+ Sbjct: 4 TESNNKVLLGMSGGTDSSVAALLLQDAGYEVTGITFRFYEKENDTEY------LEDARAL 57 Query: 62 CDKLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGA 121 C++L I T + + + + F+ EY AG TP P LCN +K+ L+ ++++G Sbjct: 58 CERLNIPHLTYDVRDTFRKTIIDYFINEYMAGHTPVPCTLCNNYLKWP-LLKKISDEMGI 116 Query: 122 DYIATGHYVRRADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQVRKI 181 + ATGHYVRR ++G + G+D +KDQS+FL+ L E + + L P+G L K +VR+I Sbjct: 117 YHFATGHYVRRRFINGCYHITTGVDPDKDQSFFLWGLPQEILQRMLLPMGNLTKARVREI 176 Query: 182 AEDLG-LVTAKKKDSTGICFIGERKFREFLGRYLPAQ---PGKIITVDGDEIGEHQGLMY 237 A + G L A K+DS G+CF +R FL + LP PGK G+ I H+G + Sbjct: 177 AAERGFLKAAHKRDSLGVCFCP-MDYRTFLHKELPEGSILPGKFFDEMGNFIARHKGYPF 235 Query: 238 HTLGQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLHWVDR 297 +T+GQR+GLGI + +V + N +++ + L + ++ H + Sbjct: 236 YTIGQRRGLGIDLNRA-----VFVKEIIPAENKVIL---SDLKALEKTEMRLKEWHITNP 287 Query: 298 EPFTGTMRCTVKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTPGQSAVFYNGEVCLGG 357 VK RYR+ CTV D+ + V EP+ A+ PGQ+A FY +V LGG Sbjct: 288 ALLLNKDDIIVKIRYRKQANRCTVTLQPDNTLHVQLHEPLTAIAPGQAAAFYRDDVVLGG 347 Query: 358 GII 360 GII Sbjct: 348 GII 350 >UniRef50_B2UPK4 tRNA-specific 2-thiouridylase mnmA n=1 Tax=Akkermansia muciniphila ATCC BAA-835 RepID=MNMA_AKKM8 Length = 357 Score = 428 bits (1101), Expect = e-118, Method: Composition-based stats. Identities = 147/346 (42%), Positives = 206/346 (59%), Gaps = 8/346 (2%) Query: 7 KVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDG-EEYCTAAADLADAQAVCDKL 65 +++VG+SGGVDSSV+A LL +QG+ V G +MKNW D+G C D+ DA AV Sbjct: 3 RILVGLSGGVDSSVAAALLVEQGHDVVGAYMKNWVNDEGIPGECPWEQDIQDALAVAKTT 62 Query: 66 GIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGADYIA 125 GIE ++ EY + + Y+AG TPNPD+LCN+E+KF FL++A E G DY+A Sbjct: 63 GIEFRVIDLVDEYRARIVNYLIEGYRAGYTPNPDVLCNREMKFGVFLDYALEQ-GFDYVA 121 Query: 126 TGHYVRRADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQVRKIAEDL 185 TGHY RR D + +LRG D NKDQSYFL + +QIA+++FP+G+L KP+VR +AE Sbjct: 122 TGHYARRMDTPQGAFILRGRDPNKDQSYFLSLMRPDQIARAVFPLGDLLKPEVRVLAEKY 181 Query: 186 GLVTAKKKDSTGICFIGERKFREFLGRYLPAQPGKIITVDGDEIGEHQGLMYHTLGQRKG 245 GL TA+KKDS GICFIG+ K +FL YLP +PG I+ +G +G H GL T+GQRKG Sbjct: 182 GLPTARKKDSQGICFIGQVKMSDFLRHYLPDKPGNIVDTEGRTLGTHNGLHLFTMGQRKG 241 Query: 246 LGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPR-LMSVGLIAQQLHWVDREPFTGTM 304 G+ +EG + VV KDV N L++ R L + + + Sbjct: 242 HGVASPREGV--AYVVVGKDVRRNRLILGYEDASTRGLYASRAVVGG---ISNTLAPLPA 296 Query: 305 RCTVKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTPGQSAVFYN 350 R + RYR + + L++ ++ + FD P+ A+ GQ FY+ Sbjct: 297 RVMAQPRYRAKAEWASCEYLEEGKVRLGFDTPLRALAVGQVCAFYD 342 >UniRef50_Q4SDW3 Chromosome undetermined SCAF14629, whole genome shotgun sequence. (Fragment) n=2 Tax=Tetraodontidae RepID=Q4SDW3_TETNG Length = 387 Score = 428 bits (1101), Expect = e-118, Method: Composition-based stats. Identities = 152/392 (38%), Positives = 199/392 (50%), Gaps = 56/392 (14%) Query: 6 KKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYCTAAADLADAQAVCDKL 65 + V+ MSGGVDSSV+A LL+++GY V G+FMKNW+ D C A D DA VC L Sbjct: 5 RHVVCAMSGGVDSSVAALLLKRRGYNVTGVFMKNWDLLDERGVCAAEKDCEDAYRVCQIL 64 Query: 66 GIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGADYIA 125 I H V++ EYW VF L EY+ GRTPNPDILCNK IKF F + A L A Sbjct: 65 DIPFHQVSYVKEYWHKVFSDLLNEYEKGRTPNPDILCNKHIKFNHFYKHAINTLSA---- 120 Query: 126 TGHYVRRADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQVRKIAEDL 185 RL +G D KDQ++FL +S E + Q++FP+ L K V+KIA + Sbjct: 121 --------------RLYKGADHLKDQTFFLSQISQEALRQTIFPLAGLTKSFVKKIAAEA 166 Query: 186 GL-VTAKKKDSTGICFIGERKFREFLGRYLPAQPGKIITV-DGDEIGEHQ---------- 233 G K+K+S GICFIGER F F+ YL +PG ++V DG G H+ Sbjct: 167 GFHHVLKRKESMGICFIGERNFENFILEYLEPKPGNFVSVEDGTVKGAHKGRRVLCVSSD 226 Query: 234 ---------------GLMYHTLGQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHE 278 G TLGQR +G G ++ W+VVDKD+ ++VA Sbjct: 227 SCVFTFTHAFVCVPPGWFTLTLGQRARIG------GQKDAWFVVDKDIATGDVLVAPTTN 280 Query: 279 HPRLMSVGLIAQQLHWVDREPF-----TGTMRCTVKTRYRQTDIPCTVKALDDDRIEVIF 333 HP L + + HW+ +P T M C + ++ PCTV D + + Sbjct: 281 HPALYRDTVRTARFHWIAGDPPVELARTQMMECHFRFIHQMPLTPCTVTLNLDGSVWISL 340 Query: 334 DEPVAAVTPGQSAVFYNGEVCLGGGIIEQRLP 365 PV A+TPGQ AV Y G+ CLG G I Q P Sbjct: 341 SHPVRALTPGQYAVLYKGDECLGSGKIIQLGP 372 >UniRef50_Q9W5B6 Mitochondrial tRNA-specific 2-thiouridylase 1 n=7 Tax=Sophophora RepID=MTU1_DROME Length = 389 Score = 428 bits (1100), Expect = e-118, Method: Composition-based stats. Identities = 143/365 (39%), Positives = 218/365 (59%), Gaps = 21/365 (5%) Query: 17 DSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYCTAAADLADAQAVCDKLGIELHTVNFAA 76 DS+VSA LL +QG++V G+FM+NW+E D C+ ADL DA+ C +LG+EL VN+ Sbjct: 14 DSAVSAHLLAEQGFKVLGVFMRNWDEADEVGRCSGEADLKDAEWACRQLGVELRQVNYVR 73 Query: 77 EYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGADYIATGHYVRRA--- 133 EYW VF FL +Y+ G TPNPDILCN+ IKF F + A E+LG D +ATGHY R + Sbjct: 74 EYWTAVFSQFLDDYQMGLTPNPDILCNRHIKFDLFHKHALENLGYDAVATGHYARNSLGN 133 Query: 134 -----DVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQVRKIAEDLGL- 187 + +RLL D+ KDQ++FL +S + + +++FP+G+ +K QV+ +A+ +G Sbjct: 134 YLEGIASNNDARLLIPADTFKDQTFFLAGISRKALQRTMFPLGDFQKSQVKDLAKKIGFQ 193 Query: 188 VTAKKKDSTGICFIGERKFREFLGRYLPAQPGKIITVD-GDEIGEHQGLMYHTLGQRKGL 246 AKKK+STGICF+G+R F++F+ Y+ ++ G + +D G +G H+G+ T+GQR L Sbjct: 194 RLAKKKESTGICFVGKRNFKDFIQEYITSKRGPFLDIDSGAVVGHHEGIHQWTVGQRCRL 253 Query: 247 GIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLHWVDREPF-----T 301 +P++V K+ +N + VA GH HP L+S + +W+ + T Sbjct: 254 S------SFLQPYFVARKEAASNTIYVASGHNHPALLSTHIAVDPPNWLCSKSQQILSDT 307 Query: 302 GTMRCTVKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTPGQSAVFYNGEVCLGGGIIE 361 G++RC + ++ + + C + + V D P+ A+TPGQ AVFY+ CLG I Sbjct: 308 GSLRCRFRFQHTKPLVDCQLSISPSNTFLVELDAPLRAITPGQYAVFYDDTACLGSARIL 367 Query: 362 QRLPL 366 PL Sbjct: 368 SANPL 372 >UniRef50_D2MI59 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase n=1 Tax=Candidatus Poribacteria sp. WGA-A3 RepID=D2MI59_9BACT Length = 372 Score = 427 bits (1099), Expect = e-118, Method: Composition-based stats. Identities = 134/361 (37%), Positives = 189/361 (52%), Gaps = 23/361 (6%) Query: 12 MSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDD---------GEEYCTAAADLADAQAVC 62 MSGGVDSSV+A LL +QGY V+G+ ++ WE +D E C + A+ V Sbjct: 1 MSGGVDSSVAALLLTEQGYDVQGVTLQVWEPEDDNAAVTKKWEERGCCK---VGLARHVA 57 Query: 63 DKLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGAD 122 +LGI V+ + NV + F+A Y G TPNP + CN+ +KF E A + G D Sbjct: 58 GRLGIPHEVVDTRETFRKNVIDDFVAGYLGGTTPNPCVRCNEWVKFGGLYELAKDR-GID 116 Query: 123 YIATGHYVRRADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQVRKIA 182 ++ATGHY R VD L RG D KDQSYFLY L + LFPVG L+K +V A Sbjct: 117 FVATGHYARVVPVDEGVGLFRGADGKKDQSYFLYRLPAAWLPHILFPVGHLQKTEVWARA 176 Query: 183 EDLGLVTAKKKDSTGICFIGERKFREFLGRYLPA--QPGKIITVDGDEIGEHQGLMYHTL 240 E+L L + K+S ICF+ + +R FL P +PG + +G +IGEH+G+ ++T Sbjct: 177 EELDLPADEMKESQEICFVTQGDYRTFLTEEAPQALRPGPFLDPEGRKIGEHRGIAFYTP 236 Query: 241 GQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLHWVDREPF 300 GQRKGLGI E YV + + E N +V+ + + L Q ++W+ Sbjct: 237 GQRKGLGIARG-----ERLYVKEVNPETNAVVLGRAED---LSRQTCTVQDVNWLADTLP 288 Query: 301 TGTMRCTVKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTPGQSAVFYNGEVCLGGGII 360 +K RY + V+ + + F EP A++PGQS V Y + LGGGII Sbjct: 289 ETLDHVAIKYRYASPAVSGQVQPHTAGTLSIEFKEPQQALSPGQSLVLYQADRVLGGGII 348 Query: 361 E 361 + Sbjct: 349 Q 349 >UniRef50_A0LEL7 tRNA-specific 2-thiouridylase mnmA n=1 Tax=Syntrophobacter fumaroxidans MPOB RepID=MNMA_SYNFM Length = 362 Score = 425 bits (1094), Expect = e-117, Method: Composition-based stats. Identities = 135/371 (36%), Positives = 194/371 (52%), Gaps = 19/371 (5%) Query: 2 SETAKKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYCTAAADLADAQAV 61 E + +V V MSGGVDS +A LL++QG V G+ M++ +C A + Sbjct: 1 MERSLRVAVAMSGGVDSLRAAILLKEQGNDVFGVHMRHVPPSRTGRWCAGAMIREKEAFL 60 Query: 62 CD---KLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAED 118 C+ + G + V+ + +V E F+ Y G+TPNP I CN +KF +E A Sbjct: 61 CELGLRFGFPIAVVDLRDAFESHVIEPFMEAYLLGQTPNPCIFCNPAVKFGFLMEKA-RA 119 Query: 119 LGADYIATGHYVRRAD---VDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEK 175 LGA+ ATGHY R + + RLLRG D +KDQSYFLY LS +Q+A +LFP+G K Sbjct: 120 LGAERFATGHYARVSPPGPTSRRFRLLRGSDLSKDQSYFLYGLSQDQLASTLFPLGSTRK 179 Query: 176 PQVRKIAEDLGLVTAKKKDSTGICFIGERKFREFLGRYLP----AQPGKIITVDGDEIGE 231 V A LG+ + +S ICF+ K+ EFL L G I+ ++G E+G Sbjct: 180 RDVSAWAGQLGIASLFPGESQEICFVPAGKYHEFLTERLDTLHAPAEGPILDLEGRELGR 239 Query: 232 HQGLMYHTLGQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQ 291 H+G+ +T+GQR+GLGI + P YVV + N + V + + L L + Sbjct: 240 HKGIFAYTIGQRRGLGI-----ASSAPLYVVGLEPAANAVRVGRVGD---LDRDRLEVGR 291 Query: 292 LHWVDREPFTGTMRCTVKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTPGQSAVFYNG 351 ++WV +RC V+ R + V + + V F+ P AVTPGQSAVFY+G Sbjct: 292 VNWVSIPAPNVPVRCRVRIRNQHAPAAAVVTPVGERSASVRFEAPQRAVTPGQSAVFYDG 351 Query: 352 EVCLGGGIIEQ 362 +V LGGG I + Sbjct: 352 DVVLGGGTISK 362 >UniRef50_Q1J090 tRNA-specific 2-thiouridylase mnmA n=5 Tax=Deinococci RepID=MNMA_DEIGD Length = 381 Score = 425 bits (1094), Expect = e-117, Method: Composition-based stats. Identities = 144/372 (38%), Positives = 216/372 (58%), Gaps = 16/372 (4%) Query: 3 ETAKKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEED---DGEEYCTAAADLADAQ 59 + +++V+ MSGGVDSSV+A LL+ GYQV G M+ W +D D + C + +A+ Sbjct: 6 KASQRVLCAMSGGVDSSVTAALLKDAGYQVIGAMMRFWPDDKRVDTFDTCCSPDAAYEAR 65 Query: 60 AVCDKLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDL 119 V +++G+ + +++ ++ ++ FL+EY GRTPNP + CN ++KF ++ A + L Sbjct: 66 RVAEQVGVPFYLLDYREQFQHHIVGPFLSEYAQGRTPNPCVNCNTKVKFDELVKKA-KML 124 Query: 120 GADYIATGHYV-RRADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQV 178 G Y+ATGHYV R DG RG D KDQ+YFL+ E + LFPVGELEKP+V Sbjct: 125 GCRYVATGHYVKRVEREDGSVEFHRGDDPRKDQTYFLWGTPREALPFILFPVGELEKPRV 184 Query: 179 RKIAEDLGLVTAKKKDSTGICFIGERKFREFLGRYLPAQPGKIITVD-GDEIGEHQGLMY 237 R+IA + GL+TA+K +S ICF+ K ++F+ +LP + G I + G+ +GEH G + Sbjct: 185 REIAAEKGLLTARKPESQNICFVP-GKVQDFVAEHLPQRQGLIREIRTGEVVGEHLGTQF 243 Query: 238 HTLGQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLHWVDR 297 +TLGQ+KGLG+ T +VV D E N + V ++ + GL A+ +++ Sbjct: 244 YTLGQKKGLGLYQ----THRVRHVVHLDPETNTVWVG---DYEDCLWTGLKAEGANYL-L 295 Query: 298 EPFTGTMRCTVKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTPGQSAVFYNGEVCLGG 357 + V+ RYR + TV D+ E+ F+EP AV PGQSAV Y G LGG Sbjct: 296 DLAELPREVEVQVRYRTKPVRATVLHADEHGFELQFEEPQFAVAPGQSAVLYAGTRLLGG 355 Query: 358 GII-EQRLPLPV 368 G+I + LPV Sbjct: 356 GLIADHARNLPV 367 >UniRef50_A7HCV7 tRNA-specific 2-thiouridylase mnmA n=1 Tax=Anaeromyxobacter sp. Fw109-5 RepID=MNMA_ANADF Length = 349 Score = 424 bits (1091), Expect = e-117, Method: Composition-based stats. Identities = 134/358 (37%), Positives = 186/358 (51%), Gaps = 15/358 (4%) Query: 7 KVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEY--CTAAADLADAQAVCDK 64 +V+V +SGGVDSS +A LL +G+ V G+ M+ + D C A DL DA+A + Sbjct: 2 RVLVALSGGVDSSTAAALLVAEGHDVIGVSMRVADYSDARRGRSCCAPDDLEDARAAARR 61 Query: 65 LGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGADYI 124 L I + N A + + V E F+ +Y GRTPNP + CN ++KF L A LGA + Sbjct: 62 LDIPFYVANVEARFRERVIEPFVRDYVEGRTPNPCVACNSDVKFDWLLARA-RALGA-KL 119 Query: 125 ATGHYVRRADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQVRKIAED 184 ATGHY R G+ L R D KDQ+YFLY L E + LFPVG+L K VR +A Sbjct: 120 ATGHYARVERRGGRFALCRAGDPAKDQTYFLYGLGQEALRDVLFPVGDLAKRDVRAVAAQ 179 Query: 185 LGLVTAKKKDSTGICFIGERKFREFLGRYLP--AQPGKIITVDGDEIGEHQGLMYHTLGQ 242 GL A+K +S ICF+ + +F+ P + G+I++ G+ +G H G+ T+GQ Sbjct: 180 AGLPNAEKAESQEICFVTQGDAGDFVALRAPGSVRAGEIVSTAGEVLGRHDGVHRFTVGQ 239 Query: 243 RKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLHWVDREPFTG 302 R+GLG+ G P YVV + +VV E R ++ W+ P Sbjct: 240 RRGLGLAG-----PAPRYVVRLEPGTARVVVGSAGEASR---DRFAVTEVRWIAGAPPPR 291 Query: 303 TMRCTVKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTPGQSAVFYNGEVCLGGGII 360 + VK R+R TV D +V PV V PGQ+AVFY+G+ LGGG I Sbjct: 292 PVAARVKVRHRHEGEEGTVTP-DGGGGQVRLARPVRGVAPGQAAVFYDGDEVLGGGRI 348 >UniRef50_C5MCB7 Putative uncharacterized protein n=1 Tax=Candida tropicalis MYA-3404 RepID=C5MCB7_CANTT Length = 426 Score = 424 bits (1090), Expect = e-117, Method: Composition-based stats. Identities = 134/367 (36%), Positives = 202/367 (55%), Gaps = 14/367 (3%) Query: 6 KKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYCTAAADLADAQAVCDKL 65 +IV MS GVDSSV A L Q V G++M NW ++ D D Q VC L Sbjct: 66 DHIIVAMSSGVDSSVCAALFQN-YKNVHGIYMANWSQNAT----CTERDWRDVQKVCQDL 120 Query: 66 GIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDL--GADY 123 I+ VNF EYW++VF + +Y+ G TPNPDI CNK +KF E+ + + Sbjct: 121 NIDCERVNFEHEYWNDVFLPMIEKYERGLTPNPDIGCNKYVKFGKLAEYLEQKYHGKKWW 180 Query: 124 IATGHYVRRADVD--GKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQVRKI 181 + TGHY R + G+ LLRGL S KDQSY+L ++ +++++ P+G KP++R++ Sbjct: 181 LVTGHYARVMKHNATGEYHLLRGLSSRKDQSYYLSSIPASILSKTILPIGHYTKPEIREL 240 Query: 182 AEDLGLVTAKKKDSTGICFIGER--KFREFLGRYLPAQPGKIITVDGDEIGEHQGLMYHT 239 A+ L TA K DS G+CF+ FR+FL Y+PA PG I+T DG G+H+GL + T Sbjct: 241 AKKFNLHTASKPDSQGLCFVNPNQSNFRDFLNEYIPANPGDIVTEDGTVWGKHKGLWHAT 300 Query: 240 LGQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLHWVDREP 299 +GQR + + + W+V +K++E N LV+ +G ++P+L + L W+ + Sbjct: 301 IGQRSTVSMPQGDPKYQGVWFVSEKNIEKNQLVIVKGTDNPKLFKQVVEITDLEWIQPKE 360 Query: 300 FTGTMRCTVKTRYRQ--TDIPCTVKALDDDRIEVIFDEPVAAVTPGQSAVFYNGEVCLGG 357 M V+ +Y T +P V D++ + ++P A+ PGQ + YNG LGG Sbjct: 361 KVLAMD-NVQFQYHSLTTPVPVKVIKNKGDKLIIELEKPARALAPGQGGILYNGNQVLGG 419 Query: 358 GIIEQRL 364 G+I + L Sbjct: 420 GMINKTL 426 >UniRef50_B0SG84 tRNA-specific 2-thiouridylase mnmA n=6 Tax=Leptospira RepID=MNMA_LEPBA Length = 380 Score = 424 bits (1090), Expect = e-117, Method: Composition-based stats. Identities = 142/372 (38%), Positives = 214/372 (57%), Gaps = 22/372 (5%) Query: 1 MSETAKKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEE-----DDGEEYCTAAADL 55 M E +K+IV MSGGVDS+V+A LL + GY V G+ ++ WE D ++ C + D+ Sbjct: 1 MKEK-EKIIVAMSGGVDSAVAAGLLMEAGYDVIGVNLRTWEYEAPACDTTKKSCCSPEDI 59 Query: 56 ADAQAVCDKLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFA 115 DA+ V L I + + + + V + F+++YK GRTPNP + CN +KF A E A Sbjct: 60 RDARDVGLSLNIPFYVIKMEKVFGERVIDRFISDYKDGRTPNPCVECNTFVKFGALFEQA 119 Query: 116 AEDLGADYIATGHYVRRADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEK 175 + LG D IATGHY R +VDG+ + +D K+Q+Y+LY LS + I ++FP+GE++K Sbjct: 120 -KKLGIDKIATGHYARVIEVDGRYAIRNAVDMKKNQTYYLYGLSQDNIKNTVFPLGEMDK 178 Query: 176 PQVRKIAEDLGLVTAKKKDSTGICFIGERKFREFLGRY-LPAQPGKIITVDGDEIGEHQG 234 +VR+IA+ +GL A+K +S ICFI E +R FL + + PG G IG+HQG Sbjct: 179 SEVREIAKRMGLPVAEKPESQEICFIPENDYRSFLKKKGMEFTPGFFKLASGQIIGKHQG 238 Query: 235 LMYHTLGQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLHW 294 T+GQRKGLGI + P YV+ + ++ +V+ + E +S + +++ + Sbjct: 239 KEGFTIGQRKGLGI-----AWKNPLYVLSIE-DDGTVVLGEEEET---VSESFVLEEITY 289 Query: 295 VDREPFT--GTMRCTVKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTPGQSAVFY--N 350 P +M V+ RYR + C V +L + +V F E V +VTPGQSA FY N Sbjct: 290 QALAPLALGQSMEMKVQIRYRSAPVHCKVTSLGE-TWKVNFLEDVKSVTPGQSATFYPTN 348 Query: 351 GEVCLGGGIIEQ 362 G+ GGII++ Sbjct: 349 GDYLFAGGIIQK 360 >UniRef50_D2QHY9 tRNA(5-methylaminomethyl-2-thiouridylate)-methyl transferase n=1 Tax=Spirosoma linguale DSM 74 RepID=D2QHY9_9SPHI Length = 391 Score = 423 bits (1089), Expect = e-117, Method: Composition-based stats. Identities = 126/369 (34%), Positives = 202/369 (54%), Gaps = 22/369 (5%) Query: 7 KVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDG-----EEYCTAAADLADAQAV 61 +++V MSGG+DSS++A +L ++GY+V G+ MK W+ E C + + DA+ + Sbjct: 6 RILVAMSGGIDSSLAAVMLHEEGYEVIGMTMKTWDYASSGGTKKETGCCSLDSINDARNI 65 Query: 62 CDKLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGA 121 LG + ++ E+ D V + F EY GRTPNP ++CN IK+ A L A + L Sbjct: 66 AVSLGFPHYILDIREEFGDAVIDHFTGEYLEGRTPNPCVMCNTHIKWDALLRRA-DRLDC 124 Query: 122 DYIATGHYVRRADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQVRKI 181 + IATGHY + +G+ L +G+D+ KDQSY L+ +S E ++++ P+G L K ++R + Sbjct: 125 ESIATGHYAHIREDNGRFVLSKGVDTLKDQSYVLWGVSQESLSRTKLPLGHLRKSEIRDM 184 Query: 182 AEDLGL-VTAKKKDSTGICFIGERKFREFLGRYLPAQP-----GKIITV-DGDEIGEHQG 234 A + G K +S ICF+ + +R FL R +P G + G +G+HQG Sbjct: 185 ATERGFMELVTKSESYEICFVPDNDYRGFLKRRMPGLEAEVAGGNFVMEGTGKVLGKHQG 244 Query: 235 LMYHTLGQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLHW 294 ++T+GQRKGLG+ +P +V + + N +V+ + L G+I +L+ Sbjct: 245 YPFYTIGQRKGLGM-----AFGQPMFVTEIRKDTNEVVLGVDKD---LYRDGMIVSKLNL 296 Query: 295 VDREPFTGTMRCTVKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTPGQSAVFYNGEVC 354 G M K RY+ T+ + D+IEV+F E V+A+ PGQ+AVFY G+ Sbjct: 297 QKYPTLNGPMETVTKVRYKDPGTAATI-SQSGDKIEVLFKEGVSAIAPGQAAVFYEGDDV 355 Query: 355 LGGGIIEQR 363 +GGG I + Sbjct: 356 IGGGWIMKS 364 >UniRef50_Q73PV6 tRNA-specific 2-thiouridylase mnmA n=2 Tax=Treponema RepID=MNMA_TREDE Length = 366 Score = 423 bits (1088), Expect = e-117, Method: Composition-based stats. Identities = 143/358 (39%), Positives = 202/358 (56%), Gaps = 22/358 (6%) Query: 7 KVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYCTAAADLADAQAVCDKLG 66 KV+VG+SGGVDS+V+A LL QGY V G+ M+ + G Y D+ DA+ V DKLG Sbjct: 2 KVLVGLSGGVDSAVAAKLLIDQGYDVTGVTMQLLPKLSGI-YKEQTDDIEDAKKVADKLG 60 Query: 67 IELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGADYIAT 126 I+ + + + + F+ EYK GRTPNP +CN +IKF FLE A +D G D IAT Sbjct: 61 IKHIVYDMRETFKTEIIDYFVEEYKQGRTPNPCFICNSKIKFGLFLEQALKD-GFDKIAT 119 Query: 127 GHYVRRADV----DGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQVRKIA 182 GHY + D + L + D+ KDQSYFL L+ EQ+++S+FP+G+ K +VR IA Sbjct: 120 GHYAKIEKTEIEGDERFLLRQAEDAQKDQSYFLALLTQEQLSRSIFPLGDFTKEKVRSIA 179 Query: 183 EDLGLVTAKKKDSTGICFIGERKFREFLGRYLP--AQPGKIITVDGDEIGEHQGLMYHTL 240 ED GL+ A + DS ICF+ + + + + GK I G+EIG H+GL Y+T+ Sbjct: 180 EDAGLINAHRPDSQDICFVPDDDYTRVINALAAGSFKEGKFIDTMGNEIGRHKGLQYYTI 239 Query: 241 GQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLHWVDREPF 300 GQR+GL I P YVV KD + N + V + E L + LIA +++ + ++ Sbjct: 240 GQRRGLAI-----AMGYPVYVVKKDAKTNTVTVGKDEE---LFAESLIASRVNIILKKTI 291 Query: 301 TGTMRCTVKTRYRQTDIPCTVKALDD------DRIEVIFDEPVAAVTPGQSAVFYNGE 352 + VKTRYRQ + L + + +V F EP AV GQ+AVFY G+ Sbjct: 292 DKEIDIEVKTRYRQQKKKAKLIPLKNEEFKPTGKFKVEFIEPEKAVAEGQAAVFYTGD 349 >UniRef50_Q5PBB1 tRNA-specific 2-thiouridylase mnmA n=21 Tax=cellular organisms RepID=MNMA_ANAMM Length = 387 Score = 423 bits (1087), Expect = e-117, Method: Composition-based stats. Identities = 138/362 (38%), Positives = 198/362 (54%), Gaps = 15/362 (4%) Query: 8 VIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEED--DGEEYCTAAADLADAQAVCDKL 65 V+V MSGGVDSSV A LL ++GY+V G M+ G + C + D+ DA+ V L Sbjct: 31 VVVAMSGGVDSSVVAALLHERGYKVIGATMQLHSSSPASGAKSCCGSVDIYDAKRVASTL 90 Query: 66 GIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGADYIA 125 G + +++ + V + F+ YK G TP P + CN+ +KF+ L+ AA +G D +A Sbjct: 91 GFPHYVLDYEEVFRREVIDDFINSYKRGETPIPCVKCNQTVKFRDMLK-AARAIGGDVVA 149 Query: 126 TGHYVRRADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQVRKIAEDL 185 TGHYVRR ++ G+ ++LRG D KDQSYFL++++ EQ+ FP+G+L K VR +A+ L Sbjct: 150 TGHYVRRVEIAGEQQILRGKDPQKDQSYFLFSVTSEQLKFLRFPLGDLAKSNVRLLAQQL 209 Query: 186 GLVTAKKKDSTGICFIGERKFREFLGRYLPA--QPGKIITVDGDEIGEHQGLMYHTLGQR 243 L A K DS ICF+ E +RE L PA + GKI+ VDG +GEH G+ T+GQR Sbjct: 210 NLEVADKPDSQDICFVPENSYREVLRNLDPASVKKGKIVHVDGRLLGEHDGISNFTVGQR 269 Query: 244 KGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLHWV-DREPFTG 302 +GL I P YVV D N +VV LM L + L+W+ D Sbjct: 270 RGLNISAPY-----PLYVVRLDAAQNTVVVGPQS---ALMKRALFVKNLNWLPDYNIPKR 321 Query: 303 TMRCTVKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTPGQSAVFYNGEVCLGGGIIEQ 362 + + R + T+ + D V+ +E V+PGQ+ V Y+ E LGGG I Sbjct: 322 GLAVDARLRSSGATVRATITSDGDGYGTVVLEED-CVVSPGQACVLYDKERLLGGGWIYN 380 Query: 363 RL 364 +L Sbjct: 381 KL 382 >UniRef50_C9RAV2 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase n=1 Tax=Ammonifex degensii KC4 RepID=C9RAV2_AMMDK Length = 344 Score = 421 bits (1084), Expect = e-116, Method: Composition-based stats. Identities = 126/358 (35%), Positives = 188/358 (52%), Gaps = 27/358 (7%) Query: 7 KVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYCTAAADLADAQAVCDKLG 66 +V V +SGGVDS+ +A+LL Q GY+V G+ M E+ A V KL Sbjct: 3 RVAVALSGGVDSATAAFLLLQAGYEVFGVTMLVTGEEG-----------EKAAEVAAKLK 51 Query: 67 IELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGADYIAT 126 I + E+ V + F+ Y AG TPNP + CN+++KF LE A LGAD++AT Sbjct: 52 IPHFVFDLRQEFAQEVIKPFVEAYLAGLTPNPCVWCNRKLKFGLLLEKAL-KLGADFLAT 110 Query: 127 GHYVRR--ADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQVRKIAED 184 GHY R + L RG D KDQSYFLY+L+ +Q+A+ LFP+G K + + + Sbjct: 111 GHYARVWFDPARERYLLARGKDRRKDQSYFLYSLNQQQLARVLFPLGGRTKAENLLLVKK 170 Query: 185 LGLVTAKKKDSTGICFIGERKFREFLG--RYLPAQPGKIITVDGDEIGEHQGLMYHTLGQ 242 LGL +++S +CF+ +RE + +PG I+ G +IG H+GL ++T+GQ Sbjct: 171 LGLPL--REESQDVCFLKGGDYRELIKAMAQEKVKPGPILDPQGKKIGTHRGLAFYTIGQ 228 Query: 243 RKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLHWVDREPFTG 302 R+GLG +P+YV+ D N L+V L + ++++ E G Sbjct: 229 RRGLG-----HAWGKPYYVLALDPRRNALIVGPEE---MLYRPSCRVEGINFILFERPPG 280 Query: 303 TMRCTVKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTPGQSAVFYNGEVCLGGGII 360 V+ RY +P T+ + + + V F P AVTPGQ+AVFY ++ +GGG I Sbjct: 281 PFTAAVQVRYTSPAVPATLFP-EGEAVRVEFASPQRAVTPGQAAVFYQEDLVVGGGTI 337 >UniRef50_A1BI85 tRNA-specific 2-thiouridylase mnmA n=2 Tax=Chlorobiaceae RepID=MNMA_CHLPD Length = 357 Score = 421 bits (1082), Expect = e-116, Method: Composition-based stats. Identities = 144/370 (38%), Positives = 209/370 (56%), Gaps = 28/370 (7%) Query: 1 MSETAKKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYCTAA----ADLA 56 M+ET V+VG+SGGVDS+V+A LL +QGY+V GL ++ + D + +D A Sbjct: 1 MTET---VVVGISGGVDSAVAACLLMKQGYRVLGLNIRILDTPDEHPSLAPSPLLISDHA 57 Query: 57 DAQAVCDKLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAA 116 D Q + ++N +A + V F A+Y AG+TPNP ++CNK+IK+ LE A Sbjct: 58 DYQ-------FPVFSLNLSARFSQEVIRYFQADYLAGKTPNPCMVCNKKIKWHGLLEGA- 109 Query: 117 EDLGADYIATGHYVRRADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKP 176 LGA+ IATGHY R A +DG+ RL +GLD KDQSYFL+ LS + ++ FP+GEL K Sbjct: 110 RLLGAERIATGHYARTASLDGRVRLYKGLDPQKDQSYFLWMLSQNDLNKTCFPLGELAKE 169 Query: 177 QVRKIAEDLGLVTAKKKDSTGICFIGERKFREFLGRYLPAQP-----GKIITVDGDEIGE 231 +VR++A G+ A+KK+S ICF+ + +L +P G I+ +G +G+ Sbjct: 170 KVRELARTFGVRAAEKKESQEICFVPHDDYCRYLELAVPGLKEKVAGGDIVDENGKVLGK 229 Query: 232 HQGLMYHTLGQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQ 291 H+G ++T+GQR+GLG+ T EP YV D ENN + L + L Sbjct: 230 HRGYPFYTIGQRRGLGLSST-----EPLYVTALDQENNCVHTGNKS---SLDTRSLTVSG 281 Query: 292 LHWVDREPFTGTMRCTVKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTPGQSAVFYNG 351 L+W++ + + K RYR + PCT+ L D + + F AV PGQ+AVFY+ Sbjct: 282 LNWINNKSLDEPVEAFGKIRYRDRETPCTIAPLPDGQATITFHTAKHAVAPGQAAVFYHD 341 Query: 352 EVCLGGGIIE 361 E LGGG I Sbjct: 342 EEVLGGGFIS 351 >UniRef50_B8FEQ6 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase n=1 Tax=Desulfatibacillum alkenivorans AK-01 RepID=B8FEQ6_DESAA Length = 356 Score = 420 bits (1080), Expect = e-116, Method: Composition-based stats. Identities = 131/361 (36%), Positives = 196/361 (54%), Gaps = 13/361 (3%) Query: 7 KVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYCTAAADLADAQAVCDKLG 66 ++ + MSGGVDS +SA+LL+Q + G+ E++G A+A +L Sbjct: 4 RIAIAMSGGVDSMISAYLLKQTCRDMVGIHFITGFENEGAPPGPDGVPEPLARA-SKELD 62 Query: 67 IELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGADYIAT 126 + + VN E+ +V F+ Y GRTPNP ++CN+ +KF A L+ A A+ IAT Sbjct: 63 LPIEVVNLQEEFHTHVVAPFVDTYLKGRTPNPCMVCNRTVKFGALLDAARNRFNAEKIAT 122 Query: 127 GHYVRRADVD-GKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQVRKIAEDL 185 GHY R G+ RL++G D KDQSYFL LS Q+ ++FP+GE K Q+R+ A +L Sbjct: 123 GHYARVRPDSAGRFRLVKGADLKKDQSYFLGFLSQAQLGAAVFPLGEFTKDQIREKAVEL 182 Query: 186 GLVTAKKKDSTGICFIGERKFREFLGRY--LPAQPGKIITVDGDEIGEHQGLMYHTLGQR 243 GL K +S CFI + ++R+FL P++PG ++ V G+ IG HQG+ T+GQR Sbjct: 183 GLDKYTKPESQETCFIADDRYRDFLQNQPGFPSRPGDVVNVQGEVIGRHQGVFAFTIGQR 242 Query: 244 KGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLHWVDREPFTGT 303 +G+ I + E +YV D N + V L+S G+ ++W+ P Sbjct: 243 RGINIPAS-----EAYYVQAIDPAANRITVCFKS---GLLSRGVHVGGVNWIV-PPQKNA 293 Query: 304 MRCTVKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTPGQSAVFYNGEVCLGGGIIEQR 363 + RYR + ++ L+D + V FDEP +AVTPGQ AVFY + LG G I++ Sbjct: 294 FEAATRIRYRHKEAASAIEVLEDGTVNVWFDEPQSAVTPGQGAVFYQEDEVLGAGWIDKP 353 Query: 364 L 364 L Sbjct: 354 L 354 >UniRef50_C5CIB3 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase n=1 Tax=Kosmotoga olearia TBF 19.5.1 RepID=C5CIB3_KOSOT Length = 359 Score = 419 bits (1079), Expect = e-116, Method: Composition-based stats. Identities = 127/365 (34%), Positives = 201/365 (55%), Gaps = 19/365 (5%) Query: 7 KVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEE------DDGEEYCTAAADLADAQA 60 K+ V +SGGVDS+V+A +L+ +G+ V G MKN + + ++ C + +D D Sbjct: 4 KIGVALSGGVDSAVAAAILKAEGHDVVGYHMKNLPDTLFELVPEKKKVCCSPSDTIDTHK 63 Query: 61 VCDKLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLG 120 + KLGIEL V + + + F+ EY+AG+TPNP + CN +KF A +E A D G Sbjct: 64 IAAKLGIELRIVKLNDIFRKEIIDYFIREYQAGKTPNPCVRCNDLMKFGALMEKAFGD-G 122 Query: 121 ADYIATGHYVRRADVDGKS-RLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQVR 179 + A+GHY R + L RG+ KDQ+YFL + ++ +FP G + K ++R Sbjct: 123 MEKFASGHYARIVEHPKYGLSLARGVAKYKDQAYFLSRIKRRKLPYIIFPNGNMTKEEIR 182 Query: 180 KIAEDLGLVTAKKKDSTGICFIGERKFREF-LGRYLPAQPGKIITVDGDEIGEHQGLMYH 238 IA +LGL KK+S +CFI + +R F L + +PG+I+ ++G+ +G H+GL ++ Sbjct: 183 DIARELGLPVHSKKESQELCFIPDNDYRRFLLEEGIEIKPGEIVDLEGNVLGRHKGLAFY 242 Query: 239 TLGQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLHWVDRE 298 T+GQR+GLGI +++ YVV D + N +VV +M A + +W+ + Sbjct: 243 TVGQRRGLGI-----VSDKKLYVVALDADKNRVVVGPKE---AVMRKKFRAIEPNWLA-D 293 Query: 299 PFTGTMRCTVKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTPGQSAVFYNGEVCLGGG 358 +RC + R T++ + +EV FD+P A+TPGQ AVFY+G + LG Sbjct: 294 LDEKELRCQCQIRSNMKAQGATIRIFS-NIVEVEFDKPALAITPGQLAVFYDGNIVLGSA 352 Query: 359 IIEQR 363 IE Sbjct: 353 FIENV 357 >UniRef50_Q7TTZ4 tRNA-specific 2-thiouridylase mnmA n=2 Tax=Planctomycetaceae RepID=MNMA_RHOBA Length = 399 Score = 419 bits (1077), Expect = e-116, Method: Composition-based stats. Identities = 138/396 (34%), Positives = 216/396 (54%), Gaps = 48/396 (12%) Query: 7 KVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEED----------------------- 43 +V++ MSGGVDSSV+A LL + G++V G+FM++ E Sbjct: 3 RVVLAMSGGVDSSVAAHLLLRDGHEVIGVFMRHGEASAAACRIDSDEPQNTNPLNLPVLG 62 Query: 44 --------DGEEYCTAAADLADAQAVCDKLGIELHTVNFAAEYWDNVFELFLAEYKAGRT 95 D ++ C +A D ADA+ V +GI ++++ ++ + + F+ +Y A RT Sbjct: 63 DSAGGKRADHKQGCCSATDAADARRVAMSMGIPFYSLDLQEDFRK-IVDYFVDDYLAART 121 Query: 96 PNPDILCNKEIKFKAFLEFAAEDLGADYIATGHYVRRADVDGKSRLLRGLDSNKDQSYFL 155 PNP + CN IKF ++A + + A+++ATGHY R +G+S L RGLD +KDQSY L Sbjct: 122 PNPCVKCNHWIKFGRLFDYA-DGVDAEFVATGHYARMVHSNGRSELHRGLDGHKDQSYAL 180 Query: 156 YTLSHEQIAQSLFPVGELEKPQVRKIAEDLGLVTAKKKDSTGICFIGERKFREFLGRYLP 215 + + ++++ + PVG+ KP++R++A LGL + KKDS ICF+ + +F+ P Sbjct: 181 FGIDPARLSRMMLPVGDFTKPEIREMATSLGLGVSDKKDSQEICFVTQGHHSDFVKSRRP 240 Query: 216 ----AQPGKIITVDGDEIGEHQGLMYHTLGQRKGLGIGGTKEGTEEPWYVVDKDVENNIL 271 A G+I+T G +GEH+G T+GQRK LG+ EP +V+ + + + Sbjct: 241 EMVGATAGEIVTTGGKVVGEHKGFEAFTIGQRKRLGV-----AMGEPHFVIRIEPDTRRV 295 Query: 272 VVAQGHEHPRLMSVGLIAQQLHW-VDREPFTGTMRCTVKTRYRQTDIPCTVKALDDD--R 328 V+ + E L+ GL+A Q +W V RE ++ RY P V D R Sbjct: 296 VIGRAEE---LLRPGLVADQCNWFVTREELADAQSVGIQIRYNGQPHPGHVVMDGSDPTR 352 Query: 329 IEVIFDEPVAAVTPGQSAVFYNGEVCLGGGIIEQRL 364 ++V+FD+P AAV PGQ+AV Y+GE LGGG I + Sbjct: 353 MKVMFDDPQAAVAPGQAAVVYDGERVLGGGWITHAI 388 >UniRef50_Q0F280 TRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0F280_9PROT Length = 374 Score = 419 bits (1077), Expect = e-116, Method: Composition-based stats. Identities = 144/364 (39%), Positives = 199/364 (54%), Gaps = 20/364 (5%) Query: 7 KVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWE----EDDGEEYCTAAADLADAQAVC 62 +VI MSGGVDSSV A LL++ G V G+F+ W+ E + C + D DA+ V Sbjct: 23 RVIAAMSGGVDSSVMAVLLKEAGVDVIGVFLNVWDYSRDEVNRHGSCCSLEDSYDARRVA 82 Query: 63 DKLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGAD 122 D +GI + ++ E+ +V + F+ +Y+ GRTPNP CN+ +KF A LE AA+ L A Sbjct: 83 DHIGIPFYAMDMRDEFRRDVIDPFIQDYETGRTPNPCERCNRFVKFGALLE-AADKLEAA 141 Query: 123 YIATGHYVRRADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQVRKIA 182 Y+ATGHYVRR D + L +G D+ KDQSYFL T + Q + LFPVG LEK R++A Sbjct: 142 YVATGHYVRRRDDNDGIHLFKGNDARKDQSYFLATTNRAQAERILFPVGGLEKDDTRRLA 201 Query: 183 EDLGLVTAKKKDSTGICFIGERKFREFLGR---YLPAQPGKIITVDGDEIGEHQGLMYHT 239 L TA K +S ICFI FL R + G I+ G +G HQG+ ++T Sbjct: 202 HFYKLPTADKHESQDICFIPAGDRIAFLKREGAEAGFREGDIVDTTGRILGRHQGIAHYT 261 Query: 240 LGQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLHWVDREP 299 LGQRKGLG+ + PW+VV D + VA + M G+ + W+ REP Sbjct: 262 LGQRKGLGLP------DGPWHVVALDGATARVTVAHPEDA---MIGGVDVSEAVWI-REP 311 Query: 300 FTGTMRCTVKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTPGQSAVFYNGEVCLGGGI 359 +G T K RY+ C ++ D+ + V F +P PGQ A FY G+ LGGGI Sbjct: 312 KSGEA-VTAKVRYQMQPAACVLEHFDE-SLRVTFAQPQKPSAPGQVAAFYAGDELLGGGI 369 Query: 360 IEQR 363 + + Sbjct: 370 VSRV 373 >UniRef50_Q5L8X6 tRNA-specific 2-thiouridylase mnmA 3 n=6 Tax=Bacteroides RepID=MNMA3_BACFN Length = 362 Score = 418 bits (1076), Expect = e-115, Method: Composition-based stats. Identities = 131/366 (35%), Positives = 208/366 (56%), Gaps = 27/366 (7%) Query: 1 MSETAKKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYCTAAADLADAQA 60 M E+ K+V+VGMSGG+DS+ + +LQ+QGY++ G+ M+ W ++ DA+ Sbjct: 1 MKESKKRVLVGMSGGIDSTATCLMLQEQGYEIVGVTMRVWGDEP-----------QDARE 49 Query: 61 VCDKLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLG 120 + ++GIE + + + D + + F+ EY+ GRTPNP ++CN KF+ +E+A + LG Sbjct: 50 LAARMGIEHYVADERVPFKDTIVKNFIDEYRQGRTPNPCVMCNPLFKFRMLIEWA-DKLG 108 Query: 121 ADYIATGHYVRRADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQVRK 180 D+IATGHY R + +G ++ G D KDQSYFL+ L + + + +FP+G K VR Sbjct: 109 CDWIATGHYSRLEERNGHIYIVAGDDDKKDQSYFLWRLGQDVLRRCIFPLGNYTKQTVRD 168 Query: 181 IAEDLGLVTAKKK-DSTGICFIGERKFREFLGRYLPA-----QPGKIITVDGDEIGEHQG 234 + G K+ +S +CFI + +R+FL P PG ++ +G ++G+H+G Sbjct: 169 YLREKGYEAKSKEGESMEVCFI-KGDYRDFLREQCPELDAEVGPGWFVSSEGVKLGQHKG 227 Query: 235 LMYHTLGQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLHW 294 Y+T+GQRKGL I K P YV+ + + N +++ + +L + ++A+Q + Sbjct: 228 FPYYTIGQRKGLEIALGK-----PAYVLKINPQKNTVMLG---DAGQLRAEYMVAEQDNI 279 Query: 295 VDREPFTGTMRCTVKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTPGQSAVFYNGEVC 354 VD + V+ RYR IPC VK L+D R+ V F +A+ PGQSAVFY G Sbjct: 280 VDEDELFACPDLAVRIRYRSRPIPCRVKRLEDGRLLVRFLAEASAIAPGQSAVFYEGRRV 339 Query: 355 LGGGII 360 LGG I Sbjct: 340 LGGAFI 345 >UniRef50_O13947 Mitochondrial tRNA-specific 2-thiouridylase 1 n=1 Tax=Schizosaccharomyces pombe RepID=MTU1_SCHPO Length = 415 Score = 418 bits (1074), Expect = e-115, Method: Composition-based stats. Identities = 141/384 (36%), Positives = 206/384 (53%), Gaps = 21/384 (5%) Query: 2 SETAKKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNW-EEDDGEEYCTAAADLADAQA 60 ++ KV V MSGGVDSS SA+LL+ QGY VEG+FM+NW +ED C A D A Q Sbjct: 28 PKSQDKVFVAMSGGVDSSFSAYLLKSQGYNVEGVFMRNWLDEDSAPSGCPAERDWATVQK 87 Query: 61 VCDKLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDL- 119 VC KL I NF EYW+ VFE L Y+ G TPNPD+ CN+++KF A + + Sbjct: 88 VCKKLNISCRRFNFEKEYWNLVFEPSLDLYENGLTPNPDVSCNRQVKFGALFDALKKHCE 147 Query: 120 ----GADYIATGHYVR--RADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGEL 173 G ++A+GHY + +S + D KDQ+ FL T+ E + +++FP+ Sbjct: 148 NNVKGDWWLASGHYAKSVVNIETNESHMCIPTDKRKDQTLFLCTIRKEALEKTIFPLHNW 207 Query: 174 EKPQVRKIAEDLGL-VTAKKKDSTGICFIGE---RKFREFLGRYL--PAQPGKII---TV 224 K V+K A G A+K++S G+CF+ RKFR+FL RYL +P K+I V Sbjct: 208 TKENVKKQASSAGFKEIAEKQESQGLCFVSPNVGRKFRKFLQRYLNFSDRPIKVIAGKNV 267 Query: 225 DGDEIGEHQGLMYHTLGQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMS 284 G+ G H G+ T+G+R GL + + WYV KD++NN L + +G + LMS Sbjct: 268 VGEFSGNH-GIWSLTVGERCGLSLPQAQSEYFGRWYVWKKDIKNNALYICRGTNNELLMS 326 Query: 285 VGLIAQQLHWVDREPF---TGTMRCTVKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVT 341 + + W + + C V+ R++Q P V + + +++ F + AVT Sbjct: 327 KCIYLKDWKWCGTKLQNLEKSALSCFVRVRHQQPLQPAKVTWRNPESVKIHFQDKQRAVT 386 Query: 342 PGQSAVFYNGEVCLGGGIIEQRLP 365 PGQ Y +VCLGGG+++ P Sbjct: 387 PGQVIAVYVNDVCLGGGMVDTVEP 410 >UniRef50_C1A7G2 tRNA-specific 2-thiouridylase MnmA n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1A7G2_GEMAT Length = 381 Score = 417 bits (1073), Expect = e-115, Method: Composition-based stats. Identities = 137/371 (36%), Positives = 204/371 (54%), Gaps = 17/371 (4%) Query: 1 MSETAKKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEE--DDGEEYCTAAADLADA 58 + +V+V MSGGVDSSV+A +L + G V G+ MK + D + C + +DA Sbjct: 4 LPPKGARVLVAMSGGVDSSVAAAILMEHGCDVVGVTMKLHGDGADVPDRPCCSLDATSDA 63 Query: 59 QAVCDKLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAED 118 + VC+KLGI + N + +V + F+ EY GRTP P + CN KF+ L A+ Sbjct: 64 RRVCEKLGIPHYVTNLVDHFSHDVLDDFVQEYARGRTPIPCVRCNTFTKFRDLL-HKADA 122 Query: 119 LGADYIATGHYVRRADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQV 178 + A ++ATGHY R G++ ++RGLD++KDQSYFL+ + + + + P+G K + Sbjct: 123 IDAPWLATGHYARIGHRHGQAVMVRGLDTSKDQSYFLWGIDRPVLDRLVLPIGAQTKAET 182 Query: 179 RKIAEDLGLVTAKKKDSTGICFIGERKFREFLGRYLPA-----QPGKIITVDGDEIGEHQ 233 R IA GL TA+K +S ICF+ + + +L A QPG + G+ IGEHQ Sbjct: 183 RDIARRFGLRTAEKIESQDICFVPDGDHVRVIAEHLGADAPALQPGPLRLASGEIIGEHQ 242 Query: 234 GLMYHTLGQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLH 293 G T+GQRKGL G EP +VV+ +VV L+ G+ A++L+ Sbjct: 243 GFARFTIGQRKGL-----PGGFAEPMFVVEIVPSERAVVVGPRE---ALLGRGVEARELN 294 Query: 294 WVDREPFTGTMRCTVKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTPGQSAVFYNGEV 353 W+ P G + V+ R R P T+ +D IE+ DE V A++PGQS V ++G+V Sbjct: 295 WLAEAPPVGA-QVQVQVRNRARPSPATIVRVDPQGIELALDEAVQAISPGQSLVVFDGDV 353 Query: 354 CLGGGIIEQRL 364 LGGGIIE+ + Sbjct: 354 VLGGGIIERGM 364 >UniRef50_Q1NYA2 TRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase n=3 Tax=Deltaproteobacteria RepID=Q1NYA2_9DELT Length = 443 Score = 415 bits (1068), Expect = e-114, Method: Composition-based stats. Identities = 143/376 (38%), Positives = 197/376 (52%), Gaps = 37/376 (9%) Query: 6 KKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYCTAAADLADAQAVCDKL 65 ++V V MSGGVDSSV+A LLQQ G +V G+FM+ + + A A AV D L Sbjct: 76 RQVAVAMSGGVDSSVTAALLQQAGAEVRGVFMRLAQPE-------VEAHRQRAAAVADFL 128 Query: 66 GIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGADYIA 125 GIEL ++ A + V F+ Y AG TPNP + CN+ IKF LE G + +A Sbjct: 129 GIELTVLDLAQPFRQQVLNPFVEAYLAGLTPNPCVFCNRLIKFGLLLEILLAQ-GVELLA 187 Query: 126 TGHYVRRADV-DGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQVRKIAED 184 TGHYVR G RL RGLD KDQSYFL L+ E++ + LFP+G+ K +V ++A Sbjct: 188 TGHYVRLLPAATGGRRLCRGLDPGKDQSYFLCRLAAEKLPRLLFPLGDKHKSEVYQLAAR 247 Query: 185 LGLVTAKKKDSTGICFIGERKFREFLGRY--------------------LPAQPGKIITV 224 LGL +S +CF+G++ +FL + L A+ G+I+TV Sbjct: 248 LGLSGRHGSESQDVCFLGKQSVGDFLAAHGPPGGAEGAGPAAGGGEVSELRARQGRIVTV 307 Query: 225 DGDEIGEHQGLMYHTLGQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMS 284 DG E+G+H G+ +T+GQR+GLGI P+YVV D N++VV + + L Sbjct: 308 DGRELGQHGGVHRYTVGQRRGLGIPDAT-----PYYVVALDAARNLVVVGKPED---LQR 359 Query: 285 VGLIAQQLHWVDREPFTGTMRCTVKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTPGQ 344 + L+W+ P R V+ R+R P ++ D V FDEP A PGQ Sbjct: 360 RLIRLADLNWLTTAPPPLPARFAVQLRHRHRPAPALIEPAADGTFSVSFDEPQRAPAPGQ 419 Query: 345 SAVFYNGEVCLGGGII 360 A Y+GE L GG I Sbjct: 420 YAALYDGEQLLAGGEI 435 >UniRef50_Q6MLR7 tRNA-specific 2-thiouridylase mnmA n=1 Tax=Bdellovibrio bacteriovorus RepID=MNMA_BDEBA Length = 360 Score = 415 bits (1068), Expect = e-114, Method: Composition-based stats. Identities = 135/370 (36%), Positives = 202/370 (54%), Gaps = 24/370 (6%) Query: 4 TAKKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEE-----DDGEEYCTAAADLADA 58 + +V+V MSGGVDSS +A LL +QGY+V G M+ W+ ++G C ++ D+ DA Sbjct: 2 SKGRVLVAMSGGVDSSAAAALLVEQGYEVIGATMQVWDYSTCDIEEGNGTCCSSIDVDDA 61 Query: 59 QAVCDKLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAED 118 +AV D+LGI + +N A++ V + FL Y G+TP P + CN +KF ++ + Sbjct: 62 RAVADRLGIPFYVINCEAKFRAAVIDPFLKAYLEGQTPLPCVNCNTYLKFDHLVKK-MRE 120 Query: 119 LGADYIATGHYVRRADVD-GKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQ 177 L DYIATGHY + D GK+ + D KDQ+YFL+T+ E + + LFPVG+++KPQ Sbjct: 121 LECDYIATGHYAKIVYDDKGKASIHTSTDDWKDQTYFLFTIDPELVPKLLFPVGDMKKPQ 180 Query: 178 VRKIAEDLGLVTAKKKDSTGICFIGERKFREFLGRY-----LPAQPGKIITV-DGDEIGE 231 VR+ +E GLVTA+KKDS GICF+G + ++ F+ + L ++ G I +G + Sbjct: 181 VREYSESRGLVTARKKDSQGICFVGNQGYQNFIKDHVKSEILASKKGLIKRFPEGQVMAS 240 Query: 232 HQGLMYHTLGQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQ 291 H+G+ +T GQ KGLG+ E +V+ D +N + V + L + + Sbjct: 241 HEGIHNYTYGQSKGLGM-----DYHEKLFVIKIDASDNTVWVGEEKH---LFANEVDVVD 292 Query: 292 LHWVDREPFTGTMRCTVKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTPGQSAVFYNG 351 +D VK RY+ P V ++ F EP AVTPGQ+AVFY Sbjct: 293 PKLLDE--IQDGEIMNVKIRYQHKGAPAQVIKTASG-FKLKFTEPQRAVTPGQAAVFYRD 349 Query: 352 EVCLGGGIIE 361 +GGG I Sbjct: 350 RQLVGGGWIT 359 >UniRef50_B5YGH6 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase n=1 Tax=Thermodesulfovibrio yellowstonii DSM 11347 RepID=B5YGH6_THEYD Length = 342 Score = 415 bits (1068), Expect = e-114, Method: Composition-based stats. Identities = 133/360 (36%), Positives = 212/360 (58%), Gaps = 23/360 (6%) Query: 6 KKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYCTAAADLADAQAVCDKL 65 +KV++ MSGG+DSSV+A+LL+++G VEG+F ++E A++ A+ + L Sbjct: 2 EKVLLAMSGGIDSSVAAYLLREKGMAVEGVFFILFDE---------PANIELAKQTANFL 52 Query: 66 GIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGADYIA 125 I+LH + ++ +V F YK G TPNP ++CNK+IKF L+F AE + A+YIA Sbjct: 53 NIKLHIEDLREKFKADVITPFFEGYKKGITPNPCVICNKKIKFP-LLKFLAEKVKANYIA 111 Query: 126 TGHYVRRADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQVRKIAEDL 185 TGHY R ++ L++G+D KDQSYFLY + ++ +FP+GE K ++R+IAE + Sbjct: 112 TGHYARIVRINNIPLLMKGIDPKKDQSYFLYGIERTLLSHIIFPLGEYTKYKIREIAEKV 171 Query: 186 GLVTAKKKDSTGICFIGERKFREFLGRYLPAQPGKIITVD-GDEIGEHQGLMYHTLGQRK 244 G+ + ++ST +CF+ ++++ E + P + G II + G IG+H+G+ +T+GQRK Sbjct: 172 GIPSKVAEESTEVCFLRDKRYYESIR---PTKGGPIIEMSTGKIIGQHRGIHLYTIGQRK 228 Query: 245 GLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLHWVDREPFTGTM 304 LGI + P YVV + N + V + + +L+W+ + Sbjct: 229 RLGI-----ASPHPLYVVKIEPSENAVYVDSKEKA---FMREFVVNELNWLC-DIEKEEF 279 Query: 305 RCTVKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTPGQSAVFYNGEVCLGGGIIEQRL 364 C VK RY TV ++ DR V+F++P A TPGQSAVFYNG++ LGGG+I++ + Sbjct: 280 SCQVKIRYAMNPEKATVTLINKDRANVVFEKPQFAPTPGQSAVFYNGDIVLGGGVIKEIM 339 >UniRef50_B2IBH3 tRNA-specific 2-thiouridylase mnmA n=141 Tax=root RepID=MNMA_BEII9 Length = 431 Score = 414 bits (1065), Expect = e-114, Method: Composition-based stats. Identities = 136/371 (36%), Positives = 204/371 (54%), Gaps = 19/371 (5%) Query: 7 KVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDG---EEYCTAAADLADAQAVCD 63 +V+V MSGGVDSSV A LL+++GY+V G+ ++ ++ + + C A D+ DA+ V D Sbjct: 31 RVVVAMSGGVDSSVVAALLKREGYEVIGVTLQLYDHGEAVHRKGACCAGQDIQDARQVAD 90 Query: 64 KLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGADY 123 +LGI + +++ + V + F Y G TP P + CN EIKF E A + LGAD Sbjct: 91 QLGIPHYVLDYEERFRRKVIDPFAQSYATGETPIPCVSCNSEIKFADLFETA-QHLGADV 149 Query: 124 IATGHY-VRRADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQVRKIA 182 +ATGHY +A+ DG L R LDS++DQSYFL+ ++ Q+ FP+G+L KP VR++A Sbjct: 150 LATGHYVSSKAEADGGRALYRSLDSSRDQSYFLFATTNAQLELLRFPLGDLAKPDVRQMA 209 Query: 183 EDLGLVTAKKKDSTGICFIGERKFREFLGRYLPAQ--PGKIITVDGDEIGEHQGLMYHTL 240 LGLV A K DS ICF+ K+ + + R P PG+I+ VDG +G H G++++T+ Sbjct: 210 RQLGLVVADKADSQDICFVPSGKYSDVIERLSPGAVVPGEILHVDGRVLGRHSGVIHYTI 269 Query: 241 GQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLHWVDREPF 300 GQR+GLG+G G EP YV+ D ++V L + + + ++W+ Sbjct: 270 GQRRGLGLGAVGAGAGEPLYVIRLDAAKAQVIVGPRQ---ALATRRVHLRGVNWIGPGSL 326 Query: 301 ----TGTMRCTVKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTPGQSAVFYNGE---- 352 + V+ R + IP + A + I V F V+PGQ+ VFY + Sbjct: 327 QDMDEHGLEIFVQVRSTRAPIPGFLHA-HESEIWVDFALDEDGVSPGQACVFYENDQPRA 385 Query: 353 VCLGGGIIEQR 363 LGGG I Sbjct: 386 RVLGGGFISAT 396 >UniRef50_A9EXM5 tRNA-specific 2-thiouridylase mnmA n=4 Tax=Myxococcales RepID=MNMA_SORC5 Length = 385 Score = 414 bits (1064), Expect = e-114, Method: Composition-based stats. Identities = 128/373 (34%), Positives = 193/373 (51%), Gaps = 21/373 (5%) Query: 2 SETAKKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDG---EEYCTAAADLADA 58 + +V + MSGGVDSSV+A L GY+V G+ + W+ D + C A D DA Sbjct: 18 PSSGARVFIAMSGGVDSSVAAARLCDAGYEVVGVTLHLWDYPDDGSVKSRCCAPEDQHDA 77 Query: 59 QAVCDKLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAED 118 + V D LGI +T + A + ++V + F+ Y AG TP+P + CN+ +K + A E Sbjct: 78 RRVADHLGIPHYTFDRRALFREHVVDPFVEAYLAGETPSPCVACNRSVKLRELFPLA-ER 136 Query: 119 LGADYIATGHYVRRADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQV 178 LG ++ATGHY R +G +RL RG D +KDQSYFL+ L +++++ LFP+G+ K +V Sbjct: 137 LGVSWVATGHYARVVLEEGGARLYRGRDRHKDQSYFLHMLRSDELSRLLFPLGDSTKDEV 196 Query: 179 RKIAEDLGLVTAKKKDSTGICFIGERKFREFLGRYLPA--QPGKIITVDGDEIGEHQGLM 236 R A GL A+K +S +CFI ++ F+ +PG I+ DG +G H G+ Sbjct: 197 RAEAIARGLPGAEKGESQELCFIPSGRYAPFVADRAADRLRPGPIVDRDGRVVGSHGGVH 256 Query: 237 YHTLGQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLHWVD 296 T+GQRKG+G+ + P +VV D + + + + L + G W D Sbjct: 257 GFTVGQRKGIGVSLGR-----PAFVVGLDAASGAVHLGDEGD---LYAAGAEIADAVWCD 308 Query: 297 REPFTGTMRCTVKTRYRQTDIPCTVKALDD-----DRIEVIFDEPVAAVTPGQSAVFYNG 351 F + V+ R R P ++ D + F PV +V+PGQ AV Y G Sbjct: 309 DAVF--PLEAEVRVRARHEAAPGIIERRRDPATGAESFVARFASPVRSVSPGQMAVVYRG 366 Query: 352 EVCLGGGIIEQRL 364 + LGGG I+ L Sbjct: 367 DRVLGGGRIKAAL 379 >UniRef50_C1ZEX9 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase n=3 Tax=Planctomycetaceae RepID=C1ZEX9_PLALI Length = 388 Score = 413 bits (1063), Expect = e-114, Method: Composition-based stats. Identities = 143/384 (37%), Positives = 203/384 (52%), Gaps = 33/384 (8%) Query: 4 TAKKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEED------------------DG 45 + ++V++ MSGGVDSSV+A LLQQQGY+V GLFM++ E Sbjct: 2 SKERVVLAMSGGVDSSVAAVLLQQQGYEVIGLFMRSGEASASACSLPPSGLLPVIERKSH 61 Query: 46 EEYCTAAADLADAQAVCDKLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKE 105 ++ C +AAD ADAQ V D L I H +NF + D + F EY GRTPNP ++CN Sbjct: 62 KQGCCSAADAADAQRVADLLDIPFHALNFRDSF-DQIKSYFADEYLKGRTPNPCVMCNVW 120 Query: 106 IKFKAFLEFAAEDLGADYIATGHYVRRADVD-GKSRLLRGLDSNKDQSYFLYTLSHEQIA 164 +KF EFA + +GA IATGHY R + G++RL+RG D +KDQSY L+ + + ++ Sbjct: 121 LKFGRLWEFA-QQVGATRIATGHYARIIQDEFGQTRLMRGADLSKDQSYVLFGIRPDILS 179 Query: 165 QSLFPVGELEKPQVRKIAEDLGLVTAKKKDSTGICFIGERKFREFLGRY--LPAQPGKII 222 + LFPVG K ++R+IA L A K DS ICFI + +R FL RY + G + Sbjct: 180 KILFPVGHQPKAEIREIAAQANLRVAGKPDSQEICFIPDNDYRGFLRRYRDVSDTSGNFV 239 Query: 223 TVDGDEIGEHQGLMYHTLGQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRL 282 G +G+H G T+GQR+GLGI EP +V+ D E+ + + E L Sbjct: 240 DPQGKILGQHSGFEQFTIGQRRGLGIALG-----EPRFVIKIDAESRNVTLGTAEE---L 291 Query: 283 MSVGLIAQQLHWVDREPFTGTMRCTVKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTP 342 S L+A + +W+ P + CT + R + D + + F EP + V P Sbjct: 292 GSSSLVAARTNWLS-APTSEVFSCTAQIRSMHRAAAAWAQVDADGTLHLRFCEPQSGVAP 350 Query: 343 GQSAVFYNG-EVCLGGGIIEQRLP 365 GQ+ V Y+ E + G IE P Sbjct: 351 GQAVVLYDSLERVICGAWIEDSQP 374 >UniRef50_Q3Z8D8 tRNA-specific 2-thiouridylase mnmA n=5 Tax=Dehalococcoides RepID=MNMA_DEHE1 Length = 357 Score = 413 bits (1063), Expect = e-114, Method: Composition-based stats. Identities = 133/364 (36%), Positives = 199/364 (54%), Gaps = 14/364 (3%) Query: 1 MSETAKKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYCTAAADLADAQA 60 M++T++ ++V MSGGVDSSV+A LL +QGY V G+ ++ ++ + A+ Sbjct: 1 MNDTSELIMVAMSGGVDSSVAAMLLLEQGYDVAGVSLQLKSNNEPYGNGYNLKLINRARE 60 Query: 61 VCDKLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLG 120 V LGI + V+ + + V F +Y GRTPNP I CN +K A LE + Sbjct: 61 VAAALGIPHYVVDLSDIFSQRVIADFCQQYSQGRTPNPCIRCNYYVKIGALLEKIPD-FN 119 Query: 121 ADYIATGHYVRRADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQVRK 180 A Y+ATGHY R + + LL+G D KDQSYFLYTL E +++ +FP+G+ K + + Sbjct: 120 AGYLATGHYARVLSDENGTHLLKGADEKKDQSYFLYTLPPESLSRLIFPLGKRYKKDIIR 179 Query: 181 IAEDLGLVTAKKKDSTGICFIGERKFREFLGRYLPAQPGKIITVDGDEIGEHQGLMYHTL 240 +A+ + L ++K +S +CFI + ++ FL + PGKI+ G +GEHQGL +T+ Sbjct: 180 LADKMKLPVSQK-ESQDVCFIPDGDYKSFLATRMGFTPGKILDKTGKILGEHQGLPLYTI 238 Query: 241 GQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLHWVDREPF 300 GQR+GLG+ + E +V D + E N ++VA H +L + ++ W + Sbjct: 239 GQRQGLGL-----ASNEKLFVSDMNPEANTIMVAS---HDQLYTSRILLSNFIWRESRIP 290 Query: 301 TGTMRCTVKTRYRQTDIPCTVKALD--DDRIEVIFDEPVAAVTPGQSAVFYNGEVCLGGG 358 T VK RY P VK + D + PV A TPGQ+AV Y G++ LGGG Sbjct: 291 LDTPGMIVKVRY--KAAPAEVKKISQTGDFYLLELASPVWAATPGQAAVIYLGDMVLGGG 348 Query: 359 IIEQ 362 IIE Sbjct: 349 IIEH 352 >UniRef50_A8Z5W4 tRNA-specific 2-thiouridylase mnmA n=1 Tax=Candidatus Sulcia muelleri GWSS RepID=MNMA_SULMW Length = 380 Score = 413 bits (1062), Expect = e-114, Method: Composition-based stats. Identities = 155/391 (39%), Positives = 217/391 (55%), Gaps = 41/391 (10%) Query: 1 MSETAKKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYCTAAADLADAQA 60 M+ K+VIVGMSGGVDSSV+A LL++QGY V G+FMK + + C D DA Sbjct: 1 MNVKRKRVIVGMSGGVDSSVAALLLKKQGYDVIGIFMKYYNFE-----CPWREDSIDAML 55 Query: 61 VCDKLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLG 120 V L I + ++ Y + + + EYK G TPNPDI+CN +IKFK FLE + L Sbjct: 56 VSQSLKIPFYIIDITKNYKNLIIDYLYKEYKKGYTPNPDIICNSKIKFKFFLEKSI-FLK 114 Query: 121 ADYIATGHYVRRADVDGK----SRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKP 176 +D+IATGHYVR+ +++ +++ G+DSNKDQSYFL L+ QI +S+FP+G L K Sbjct: 115 SDFIATGHYVRKKEINENGKISYKIISGIDSNKDQSYFLCKLNKVQIKKSIFPLGWLNKK 174 Query: 177 QVRKIAEDLGLVTAKKKDSTGICFIGERKFREFLGRYLPAQPGKIITVD----------- 225 +VR+IA L+ A KKDS GICFIG+ KF FL + L + G II ++ Sbjct: 175 EVREIANKYNLINANKKDSQGICFIGKIKFLNFLKKKLAEKKGIIIEINKNSHIFKYKQK 234 Query: 226 -------------GDEIGEHQGLMYHTLGQRKGLGIGGTKEGTEEPWYVVDKDVENNILV 272 G IG H G Y T GQRKGL IG G + P +V++KD+ NIL Sbjct: 235 KLFSKKIEYKKEYGKIIGHHIGAHYFTKGQRKGLKIG----GYKYPLFVIEKDITKNILY 290 Query: 273 VAQGHEHPRLMSVGLIAQ--QLHWVDREPFTGTMRCTVKTRYRQTDIPCTVKALDDDRIE 330 V G HP L + + + +HW++++ + + RYRQ T+ ++D + Sbjct: 291 VGMGKNHPGLYTKVICIKKYNIHWINKKKIKTKIEVECRIRYRQNFKKATLYKKNND-LY 349 Query: 331 VIFDEPVAAVTPGQSAVFYNGEVCLGGGIIE 361 V F+ P AV GQ V+Y +G G+I Sbjct: 350 VEFEIPQLAVNGGQFIVWYINNEVIGSGLIS 380 >UniRef50_A6KZV1 tRNA-specific 2-thiouridylase mnmA 3 n=23 Tax=Bacteroides RepID=MNMA3_BACV8 Length = 375 Score = 413 bits (1062), Expect = e-114, Method: Composition-based stats. Identities = 133/368 (36%), Positives = 198/368 (53%), Gaps = 18/368 (4%) Query: 1 MSETAKKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDD--GEEYCTAAADLADA 58 M+ K+V+VGMSGG+DSS + +LQ+QGY+V G+ M+ W+ D+ +A Sbjct: 1 MNNRDKRVLVGMSGGIDSSATCIMLQEQGYEVVGVTMRTWDVPSRFSTPGQDEPDDVLEA 60 Query: 59 QAVCDKLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAED 118 +A+ ++LGIE H + E+ + + F+ EY GRTPNP +LCN K + E+A + Sbjct: 61 RALAERLGIEHHVADVRKEFKQIIVKHFIDEYMQGRTPNPCVLCNPLFKERILCEWA-DQ 119 Query: 119 LGADYIATGHYVRRADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQV 178 +I+TGHY R + GK ++ G D KDQSYFL+ L E + + LFP+G K +V Sbjct: 120 TNCAHISTGHYCRLEERKGKLYIVAGDDQTKDQSYFLWKLPQEILQRFLFPLGTYTKQEV 179 Query: 179 RKIAEDLGL-VTAKKKDSTGICFIGERKFREFLGRYLP-----AQPGKIITVDGDEIGEH 232 R+ G A+ +S ICFI E +R FL P PG + G +IG+H Sbjct: 180 REYLRQKGFEAKARGGESMEICFI-EGDYRNFLRSQCPDIDTQVGPGWFVNSKGVKIGQH 238 Query: 233 QGLMYHTLGQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQL 292 +G Y+T+GQRKGL I P YV+ + E N +++ E L + ++ + Sbjct: 239 KGFPYYTIGQRKGLEIALGH-----PAYVLRINAEKNTVMLGDAEE---LKAEYMLVEDY 290 Query: 293 HWVDREPFTGTMRCTVKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTPGQSAVFYNGE 352 H + + +V+ RYR IPC V LD+ ++ V F +A+ PGQSAVFY G+ Sbjct: 291 HITEMQDLLQCKDLSVRIRYRSKPIPCQVLVLDEKQLLVRFLSEASAIAPGQSAVFYEGK 350 Query: 353 VCLGGGII 360 LGG I Sbjct: 351 RVLGGAFI 358 >UniRef50_Q7NBZ0 tRNA-specific 2-thiouridylase mnmA n=6 Tax=cellular organisms RepID=MNMA_MYCGA Length = 657 Score = 412 bits (1060), Expect = e-114, Method: Composition-based stats. Identities = 155/379 (40%), Positives = 218/379 (57%), Gaps = 21/379 (5%) Query: 2 SETAKKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEED-----------DGEEYCT 50 + KV+V +SGGVDS+V A+LLQQQGY V FM+NW++D D + C Sbjct: 283 KQEKPKVVVALSGGVDSAVCAYLLQQQGYDVVAAFMQNWDKDLNFELLSDHADDQIQGCD 342 Query: 51 AAADLADAQAVCDKLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKA 110 A D D Q +C++L I+L+ NF +YW++VF L +YK G TPNPD+LCN+ KF Sbjct: 343 AKQDYEDTQKLCEQLKIKLYHFNFVEQYWNDVFLKVLEDYKKGLTPNPDVLCNQFGKFGW 402 Query: 111 FLEFAAEDLGAD-YIATGHYVRRADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFP 169 F+ + G D IA GHY + D + L+ D NKDQ+YFL L EQ+ +FP Sbjct: 403 FINALRKQFGDDIKIAFGHYAKLITKDDEVFLVHTKDHNKDQTYFLTMLKKEQLKNIIFP 462 Query: 170 VGELEKPQVRKIAEDLGLVTAKKKDSTGICFIGERKFREFLGRYLPAQPGKIITVD-GDE 228 + EL+KP VR+IA+ L A KKDSTGICFIGER F++FL YL + G II +D + Sbjct: 463 LSELDKPTVREIAKQANLYVANKKDSTGICFIGERNFKQFLSNYLAIKKGPIILIDENKK 522 Query: 229 IGEHQGLMYHTLGQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVA-QGHEHPRLMSVGL 287 IGEH GL ++T+GQ + L +GGTK E +V DKD NN L V + + L SV Sbjct: 523 IGEHDGLYFYTIGQSRRLHVGGTK----EKIFVCDKDYNNNTLYVCYESSKDQYLSSVSC 578 Query: 288 IAQQLHW-VDREPFTGTMRCTVKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTPGQSA 346 ++ +W +D + + ++ R+RQ C + + DD++ V + VTPGQ Sbjct: 579 ELEKFNWLIDTKDQLFNKKLWIRFRHRQKLQECEIVSYHDDKVIVKY-TKQIGVTPGQYG 637 Query: 347 VFYNGE-VCLGGGIIEQRL 364 V Y+ +GGG I + + Sbjct: 638 VIYDQNLWVVGGGKITKII 656 >UniRef50_B1GZY9 tRNA-specific 2-thiouridylase mnmA n=2 Tax=Elusimicrobia RepID=MNMA_UNCTG Length = 360 Score = 412 bits (1060), Expect = e-113, Method: Composition-based stats. Identities = 132/371 (35%), Positives = 200/371 (53%), Gaps = 24/371 (6%) Query: 2 SETAKKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWE------EDDGEEYCTAAAD- 54 ET K+++G+SGGVDS+V+A+LL++QGY+V G M W+ + + C + Sbjct: 1 METEMKILIGLSGGVDSAVAAYLLKKQGYEVTGTTMSIWDNFLPAPKTKVNDSCLGPENE 60 Query: 55 -LADAQAVCDKLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLE 113 + A + D L I L+ + + EY V E F EYK GRTPNP I CN IKF Sbjct: 61 NIETAHKIADFLTIPLYVTDCSGEYKKVVLENFRNEYKEGRTPNPCIRCNAYIKFGILPA 120 Query: 114 FAAED-LGADYIATGHYVRR--ADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPV 170 + L D ATGHY +L + D NKDQ+YFLY L+ + +++++FP+ Sbjct: 121 AVKKTGLSFDKFATGHYANIGFDSSTNMYKLYKAADLNKDQTYFLYRLTQKTLSETIFPL 180 Query: 171 GELEKPQVRKIAEDLGLVTAKKKDSTGI-CFIGERKFREFLGRYLPAQPGKIITVDGDEI 229 G K QVR IA+ +GL +A+K DS C + + L PA PG I+ +G + Sbjct: 181 GIYTKEQVRNIAKKIGLPSAEKPDSQDFYC----GDYNDILQ--FPANPGNIVDKNGRVL 234 Query: 230 GEHQGLMYHTLGQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIA 289 G+H G+ +T+G+RKGLG+ G GT++P YV++ + N++ + + L S L A Sbjct: 235 GKHNGIWNYTIGKRKGLGLLG---GTKDPLYVINISAKQNMVTIGTKED---LYSSSLTA 288 Query: 290 QQLHWVDREPFTGTMRCTVKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTPGQSAVFY 349 +++ W P T+ T K R + + +D ++V F +P +VT GQS VFY Sbjct: 289 KKVSWCSILPPKKTIEATAKIRRQHKPEKAFIIPQEDSSVKVEFAQPQMSVTAGQSIVFY 348 Query: 350 NGEVCLGGGII 360 + LGGG+I Sbjct: 349 KDDTVLGGGVI 359 >UniRef50_UPI000069DE11 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase (EC 2.1.1.61) (Mitochondrial tRNA-specific 2-thiouridylase 1) (MTO2 homolog). n=6 Tax=Euteleostomi RepID=UPI000069DE11 Length = 372 Score = 412 bits (1059), Expect = e-113, Method: Composition-based stats. Identities = 145/350 (41%), Positives = 199/350 (56%), Gaps = 37/350 (10%) Query: 2 SETAKKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYCTAAADLADAQAV 61 +T ++V+ MSGGVDSSV+A LL+++GY+V G+FM NW+ D C+A D DA V Sbjct: 1 MQTVRRVVCAMSGGVDSSVAALLLRRRGYEVTGVFMNNWDAVDEHGVCSAERDCEDAYRV 60 Query: 62 CDKLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGA 121 C KL I H V++ EYW VF FL EY+ GRTPNPDILCNK IKF FL +A + LGA Sbjct: 61 CKKLDIPFHQVSYVKEYWHEVFSYFLNEYEKGRTPNPDILCNKHIKFNHFLSYAIDILGA 120 Query: 122 DYIATGHYVRRADVDGK-----------------------SRLLRGLDSNKDQSYFLYTL 158 D IATGHY R + D + ++LL+ D KDQ++FL + Sbjct: 121 DAIATGHYARTSLEDEEIFQQKYIKSPQNLFRNRFEIRHDAKLLQAADRIKDQTFFLSQI 180 Query: 159 SHEQIAQSLFPVGELEKPQVRKIAEDLGL-VTAKKKDSTGICFIGERKFREFLGRYLPAQ 217 S + +++FP+GEL K V+KIA + G K+K+S GICFIGER F F+ YL AQ Sbjct: 181 SQYALRKTIFPLGELTKDFVKKIAAEAGFHHVLKRKESMGICFIGERNFENFILEYLEAQ 240 Query: 218 PGKIIT-VDGDEIGEHQGLMYHTLGQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQG 276 PG ++ DG +G H+G TLGQR +G G + W+VVDKDV + VA Sbjct: 241 PGNFVSAEDGKIMGRHKGWFLFTLGQRARIG------GQRDAWFVVDKDVTTGNVYVAPT 294 Query: 277 HEHPRLMSVGLIAQQLHWVDREPFT-----GTMRCTVKTRYRQTDIPCTV 321 +HP L L ++HW+ +P M C + +++ + C+V Sbjct: 295 TDHPALYRDLLRTDRMHWLSEDPPDELVKNKMMECHFRFQHQMALV-CSV 343 >UniRef50_Q6C0F9 YALI0F25069p n=1 Tax=Yarrowia lipolytica RepID=Q6C0F9_YARLI Length = 399 Score = 412 bits (1059), Expect = e-113, Method: Composition-based stats. Identities = 130/367 (35%), Positives = 197/367 (53%), Gaps = 15/367 (4%) Query: 5 AKKVIVGMSGGVDSSVSAWLLQQQGY-QVEGLFMKNWEEDDGEEYCTAAADLADAQAVCD 63 V V MS GVDSSV+A L+ ++ +V G+FM+NW D A AD D Q VC Sbjct: 36 NDHVYVAMSAGVDSSVTAALMAERYKGRVTGVFMRNWSPDSK----CAEADWNDVQQVCA 91 Query: 64 KLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDL---- 119 + I ++ EYW VFE L Y+ G TPNPD+ CN+ IKF + + Sbjct: 92 HIDIPAVNLSLEKEYWLEVFEPMLERYRQGLTPNPDVSCNRYIKFGSLKHRLKDRHENSG 151 Query: 120 --GADYIATGHYVRRA-DVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKP 176 G ++ATGHY R D G L R KDQSY+L +++ + + +FP+ + KP Sbjct: 152 MEGDWWLATGHYARVMTDESGTPGLFRPKHLAKDQSYYLSSVNSDSLRNVMFPLSDYLKP 211 Query: 177 QVRKIAEDLGLVTAKKKDSTGICFIGE--RKFREFLGRYLPAQPGKIITVDGDEIGEHQG 234 ++R++A L A K DS G+CF+ + RKFR+FL Y+ PG +IT +G+ +G+H G Sbjct: 212 EIREMAHAYKLHVASKPDSQGLCFVSQDQRKFRDFLSDYISTTPGNVITEEGEVVGQHNG 271 Query: 235 LMYHTLGQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLHW 294 L T+GQ+ G+ + W+V +K+++ N LV+ +G HP L S + A+ W Sbjct: 272 LWNATVGQKSGICLPQGNPKYRGSWFVKEKNIDTNELVIVKGGNHPSLFSSNIKAKYFSW 331 Query: 295 VDREPFT-GTMRCTVKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTPGQSAVFYNGEV 353 + +P M T++ R + T A++ + I + PV AV+PGQ+ V Y+ + Sbjct: 332 LGTKPADLSGMNLTIQFRSLMEPVAITNLAIEGEDIAIRTAVPVRAVSPGQNLVLYHEDR 391 Query: 354 CLGGGII 360 LG G+I Sbjct: 392 VLGCGVI 398 >UniRef50_UPI000180C35A PREDICTED: similar to tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase 1 n=1 Tax=Ciona intestinalis RepID=UPI000180C35A Length = 437 Score = 411 bits (1058), Expect = e-113, Method: Composition-based stats. Identities = 137/375 (36%), Positives = 207/375 (55%), Gaps = 22/375 (5%) Query: 7 KVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYCTAAADLADAQAVCDKLG 66 KVI +SGGVDS+V+A LL+++G V G+FM+NW+ +D C+ D A VC L Sbjct: 3 KVICAISGGVDSAVAALLLKRRGLNVVGVFMRNWDLEDEVGQCSVQEDATYATRVCRALD 62 Query: 67 IELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGADYIAT 126 I + VN EYW NVF + +Y+ G TPNPDILCN+ +KF AF + G IAT Sbjct: 63 IPFYEVNLVKEYWTNVFMPMVDQYEMGNTPNPDILCNQLVKFSAFHNKCSSMFGNVVIAT 122 Query: 127 GHYVRRA----------DVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKP 176 GHY R + RLL+ +D KDQ++FL+ + + +S FP+G + K Sbjct: 123 GHYARTTLNDRVLTAKVPHTAEQRLLKAVDPFKDQTFFLHKVDRTALLRSYFPLGGIFKS 182 Query: 177 QVRKIAEDLGLV-TAKKKDSTGICFIGERKFREFLGRYLPAQPGKIITVD-GDEIGEHQG 234 +V++IA + K+K+S GICFIG R+F F+ Y+ +PG+ I + G+ IG H G Sbjct: 183 KVKEIAAASEISFVLKRKESAGICFIGRREFSNFIKNYISPKPGQFICYETGNVIGNHDG 242 Query: 235 LMYHTLGQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLHW 294 +T+GQR +G G + V+ ++ ++ ++V G HP L L++ HW Sbjct: 243 YFSYTVGQRSLIG------GLRISYAVLHRNSKDGNVLVVPGLNHPALYRKSLVSGPAHW 296 Query: 295 VDREPFT----GTMRCTVKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTPGQSAVFYN 350 + EP + C + +R + +PCTV L+++R+ +I P+ A+T GQ AV Y Sbjct: 297 IAGEPALLREGKPLNCYFRFCHRNSLVPCTVHQLENERLLIILQHPLRAMTVGQDAVLYT 356 Query: 351 GEVCLGGGIIEQRLP 365 + CLGG I+ P Sbjct: 357 EDECLGGAQIDDVGP 371 >UniRef50_B9WA49 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase, putative n=3 Tax=Saccharomycetales RepID=B9WA49_CANDC Length = 424 Score = 411 bits (1058), Expect = e-113, Method: Composition-based stats. Identities = 141/373 (37%), Positives = 201/373 (53%), Gaps = 16/373 (4%) Query: 2 SETAKKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYCTAAADLADAQAV 61 + +IV MS GVDSSV A L + V GL+M NW + D D Q V Sbjct: 58 PKPDDHIIVAMSSGVDSSVCAALFKDYP-NVHGLYMANWSQSAT----CTERDWKDVQRV 112 Query: 62 CDKLGIE-LHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDL- 119 C LGI VNF EYW +VF + +Y+ G TPNPDI CNK +KF +++ E Sbjct: 113 CRDLGISSCERVNFEHEYWHDVFVPMIEKYEKGLTPNPDIGCNKFVKFGKLIDYLHEKYD 172 Query: 120 GADY-IATGHYVRRADVD--GKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKP 176 G D+ + TGHY R + G+ LLRGL KDQSY+L ++ +++ L P+G KP Sbjct: 173 GKDWWLVTGHYARIMKHNETGEYHLLRGLSQRKDQSYYLSSIPPRSLSKILLPIGHYIKP 232 Query: 177 QVRKIAEDL-GLVTAKKKDSTGICFIGE--RKFREFLGRYLPAQPGKIITVDGDEIGEHQ 233 Q+RK+A D L TA K DS G+CF+ FREFL Y+P PG I+T DG G H+ Sbjct: 233 QIRKLAHDRFQLHTATKPDSQGLCFVNPQQSNFREFLNDYIPENPGDIVTEDGKVWGRHK 292 Query: 234 GLMYHTLGQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLH 293 GL + T+GQ+ + + + W+V DK+ E N +++ +GH++PRL + QL Sbjct: 293 GLWHATIGQKSSVCMPQADPKYQGIWFVSDKNYEKNQIIIVKGHDNPRLFKQTVELTQLE 352 Query: 294 WVDREPFTGTMRCTVKTRYR--QTDIPCTVKALDDDRIEVIFDEPVAAVTPGQSAVFYNG 351 W+ + +R ++ +Y IP D++ V + PV A+ PGQ+ V YNG Sbjct: 353 WLCPKEEVIHLR-GLQFQYHSLSKSIPVKRVIDSGDKLVVELETPVRALAPGQAGVLYNG 411 Query: 352 EVCLGGGIIEQRL 364 LGGG+I + + Sbjct: 412 NRVLGGGMISRTM 424 >UniRef50_B3JKC8 Putative uncharacterized protein n=2 Tax=Bacteroides RepID=B3JKC8_9BACE Length = 353 Score = 411 bits (1057), Expect = e-113, Method: Composition-based stats. Identities = 131/369 (35%), Positives = 203/369 (55%), Gaps = 21/369 (5%) Query: 1 MSETAKKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYCTAAADLADAQA 60 M E KV++GMSGG DSSV+A LLQ GY+V G+ + +E+D+ EY L DA+ Sbjct: 1 MQE-NNKVLLGMSGGTDSSVAALLLQDAGYEVTGVTFRFYEKDNNTEY------LDDARE 53 Query: 61 VCDKLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLG 120 +C++L I T + E+ + + F+ EY GRTP P LCN +K+ L+ A++ G Sbjct: 54 LCERLHISHITYDARNEFRERIISYFINEYMTGRTPVPCTLCNNYLKWP-LLKKLADEKG 112 Query: 121 ADYIATGHYVRRADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQVRK 180 + ATGHYV++ ++DG + G D +KDQS+FL+ L + + + L P+G+L K +VR+ Sbjct: 113 IYHFATGHYVQKRNIDGYWHITTGTDVDKDQSFFLWGLPQDILQRMLLPMGKLTKNKVRE 172 Query: 181 IAEDLG-LVTAKKKDSTGICFIGERKFREFLGRYLPAQ---PGKIITVDGDEIGEHQGLM 236 IA + G L A K+DS G+CF +R FL ++ + PG G+ +G+H+G Sbjct: 173 IAAERGFLKAAHKRDSLGVCFCP-MDYRSFLKEHVKKELIMPGNFYDESGNCLGKHEGYP 231 Query: 237 YHTLGQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLHWVD 296 ++T+GQR+GLGI K +V + N ++++ + L + H + Sbjct: 232 FYTIGQRRGLGIYLNKA-----LFVKQIIPQTNSIILSD--QLCSLGQTEMYLTDWHVTN 284 Query: 297 REP-FTGTMRCTVKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTPGQSAVFYNGEVCL 355 F T VK RYR+ CTV D ++ + EP+ ++ GQ+A FY +V L Sbjct: 285 PSALFETTDEIIVKIRYRKQANRCTVIPTPDGQLHIKLHEPLTSIAAGQAAAFYRDDVVL 344 Query: 356 GGGIIEQRL 364 GGGII L Sbjct: 345 GGGIICSSL 353 >UniRef50_C9RNM8 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase n=1 Tax=Fibrobacter succinogenes subsp. succinogenes S85 RepID=C9RNM8_FIBSS Length = 355 Score = 409 bits (1053), Expect = e-113, Method: Composition-based stats. Identities = 146/363 (40%), Positives = 202/363 (55%), Gaps = 12/363 (3%) Query: 1 MSETAKKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYCTAAADLADAQA 60 MS+T +V VGMSGGVDSSV+A LLQQQGY+V G+ ++ + D + A+ Sbjct: 1 MSKT--RVAVGMSGGVDSSVAALLLQQQGYEVVGVTLRVLPDVDSAFDVENDPSVVRAKM 58 Query: 61 VCDKLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLG 120 + +KLGIE H N + + V + A++ RTPNP CN+ IKF +++A + LG Sbjct: 59 IAEKLGIEHHVANCSDAFTGEVLKRCHADFSHARTPNPCCYCNRFIKFGWMMDYA-KSLG 117 Query: 121 ADYIATGHYVRRADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQVRK 180 A+++ATGHYVR +V+G RLLRG D KDQSYFL+ + E+ L P+G K +VR+ Sbjct: 118 AEFLATGHYVRIEEVNGVRRLLRGRDPGKDQSYFLFWVPDERRNHVLTPLGTYVKSEVRE 177 Query: 181 IAEDLGLVTAKKKDSTGICF-IGERKFREFLGRYLP--AQPGKIITVDGDEIGEHQGLMY 237 IA G V AK DS ICF I ++ EFL +PG+ + G H G Sbjct: 178 IAAQNGFVNAKTGDSQDICFDIYGSQYTEFLKDRFGEMTRPGRFVDEKGKVWNTHDGFHK 237 Query: 238 HTLGQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLHWVDR 297 +T+GQRKGLG+ P +V D E ++V V ++ + H R Sbjct: 238 YTVGQRKGLGVAIGV-----PAFVKHVDPETGDILVTGDKSSVCFDRVEMVNCEWHGGVR 292 Query: 298 EPFTGTMRCTVKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTPGQSAVFYNGEVCLGG 357 E T T R RYRQ + C V +D ++ +FDEP+ AVTPGQ AVFY+G++ LGG Sbjct: 293 EVGT-TFRAEGMVRYRQRAVGCEVTIVDTNKAVAVFDEPLFAVTPGQCAVFYDGDMVLGG 351 Query: 358 GII 360 G I Sbjct: 352 GQI 354 >UniRef50_A8X0Z8 Putative uncharacterized protein n=2 Tax=Caenorhabditis briggsae RepID=A8X0Z8_CAEBR Length = 393 Score = 409 bits (1053), Expect = e-113, Method: Composition-based stats. Identities = 143/385 (37%), Positives = 211/385 (54%), Gaps = 34/385 (8%) Query: 7 KVIVGMSGGVDSSVSAWLLQQQGYQVEGLFM----------------KNWE-EDDGEEYC 49 +V++GMSGGVDS+VSA+LL+Q+G+ V GL M NW+ +++G C Sbjct: 5 RVVIGMSGGVDSAVSAFLLKQKGFDVVGLHMVTHSRQRESEKKNISQINWDSQEEGSSTC 64 Query: 50 TAAADLADAQAVCDKLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFK 109 + D ADA+ VC++L I HTVNF EYW++VF FL YK GRT PDI CN IKF Sbjct: 65 PRSKDEADARNVCNRLNIPFHTVNFVKEYWNHVFLKFLENYKIGRTTVPDIDCNYSIKFD 124 Query: 110 AFLEFAAEDLGADYIATGHYV--------RRADVDGKSRLLRGLDSNKDQSYFLYTLSHE 161 AF + A E AD+IATGHY + RL G D KDQ++FL T++ E Sbjct: 125 AFHKVAQETFDADFIATGHYATTSFGDFQQNRKHSEAIRLFSGRDPLKDQTFFLCTVTQE 184 Query: 162 QIAQSLFPVGELEKPQVRKIAEDLGLV-TAKKKDSTGICFIGERK-FREFLGRYLPAQPG 219 Q+ +++FP+G L+K +V++IAE G KK +S GICFIG++K F +FL Y+ +PG Sbjct: 185 QLKRAMFPLGSLQKSEVKRIAEQQGFHRVVKKPESMGICFIGKKKRFSDFLDEYIEPKPG 244 Query: 220 KIITVDGDEIGEHQGLMYHTLGQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEH 279 +I+ DG +IG+H G+ T+G+R E + ++V + + +V G H Sbjct: 245 RIVLKDGKQIGKHHGIHQFTIGKRIHGKYLN--ERSHFGFFVSEIRSDTGDVVACNGSHH 302 Query: 280 PRLMSVGLIAQQLHWV-DREPFTG--TMRCTVKTRYRQTDIPCTVKALDDDRIEVIFDEP 336 L + + + +W+ +P + + + +PC V+ + + V P Sbjct: 303 SDLYATRFLINRPNWIPSSDPLEEISPSKILCRIQRTHPPVPCKVEK-SEHYLSVEPKIP 361 Query: 337 VAAVTPGQSAVFY-NGEVCLGGGII 360 + A +PGQ VFY CLGGG I Sbjct: 362 LRATSPGQMCVFYTTENECLGGGEI 386 >UniRef50_C0QRH5 tRNA-specific 2-thiouridylase mnmA n=8 Tax=Aquificales RepID=MNMA_PERMH Length = 353 Score = 409 bits (1053), Expect = e-113, Method: Composition-based stats. Identities = 129/359 (35%), Positives = 206/359 (57%), Gaps = 13/359 (3%) Query: 7 KVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWE--EDDGEEYCTAAADLADAQAVCDK 64 +V VGMSGGVDSSV+A LL+++GY V G+ +K + + C + D+ DA+ V Sbjct: 2 RVAVGMSGGVDSSVAALLLKEKGYDVIGVTLKLSSIVCSNDIQVCCSPQDIKDAKRVASY 61 Query: 65 LGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGADYI 124 LGIE + +++ + + V F+ EYK G+TPNP +CN+E+K +F LGAD Sbjct: 62 LGIEHYVIDWEDIFREKVINYFVEEYKKGKTPNPCSVCNREVKTGRLAKFVNIVLGADKF 121 Query: 125 ATGHYVRRADVDGKSR-LLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQVRKIAE 183 ATGHY++ D + + RG D KDQSYF+ L + + +FP+ +L K +VRKIAE Sbjct: 122 ATGHYIKIEDHPVYGKVIKRGSDIKKDQSYFMALLERDVLDLLIFPLSDLTKEEVRKIAE 181 Query: 184 DLGLVTAKKKDSTGICFIGERKFREFL--GRYLPAQPGKIITVDGDEIGEHQGLMYHTLG 241 D + ++KK+S ICF + E+L L + G I+ +DG +G+H+GL ++T+G Sbjct: 182 DYKIPVSQKKESFEICFTAGKTPAEYLLENNLLAFESGDIVHIDGKTVGKHKGLPFYTVG 241 Query: 242 QRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLHWVDREPFT 301 QR+GLG+ EP YV++KD E N +VV E +L++ + ++ +++ Sbjct: 242 QRRGLGV-----RWREPLYVIEKDAERNTVVVG---EREKLLTDHVSSEDFNFLVPVEKW 293 Query: 302 GTMRCTVKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTPGQSAVFYNGEVCLGGGII 360 +V+ RYRQ + +++ +R+ F++P GQ Y+G++ LGGGII Sbjct: 294 KKEGLSVQGRYRQKAVKIKDVSIEGNRLTAYFEKPEERFAKGQVLAVYDGDILLGGGII 352 >UniRef50_B9GF12 Predicted protein n=6 Tax=Viridiplantae RepID=B9GF12_POPTR Length = 434 Score = 409 bits (1052), Expect = e-113, Method: Composition-based stats. Identities = 135/376 (35%), Positives = 204/376 (54%), Gaps = 23/376 (6%) Query: 1 MSETAK--KVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEY---CTAAADL 55 M++ K ++ V +SGGVDSSV+ LL G+ ++K W ++D + C DL Sbjct: 1 MADKDKPLRIAVLLSGGVDSSVALRLLHAAGHHCTAFYLKIWFQEDFNNFWSECPWEEDL 60 Query: 56 ADAQAVCDKLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFA 115 A+ VCD++G+ L V+ EYW NV + EY+ GRTPNPD+LCN IKF AF++ A Sbjct: 61 KFAKGVCDQVGVPLEVVHLTDEYWSNVVSYIIEEYRCGRTPNPDVLCNTRIKFGAFMD-A 119 Query: 116 AEDLGADYIATGHYVRRAD-----VDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPV 170 ++ DY+A+GHY ++ S L D KDQ+YFL L+ Q+ + +FP+ Sbjct: 120 INNMEFDYVASGHYAHVIHPVSDQINKPSVLELSKDKLKDQTYFLSHLTQAQLKRLIFPL 179 Query: 171 GELEKPQVRKIAEDLGLVTAKKKDSTGICFIGERKFREFLGRYLPAQPGKIITVD-GDEI 229 G + K +VR +A L +KDS GICF+G+ KF EF+GR++ G I+ + GD + Sbjct: 180 GCIPKEEVRNLASKFDLPNKDRKDSQGICFLGKIKFSEFVGRHIGESEGVILEAETGDFL 239 Query: 230 GEHQGLMYHTLGQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIA 289 G H+G ++T+GQR+GL + G PWYVV+KDV+NN++ V++ + Sbjct: 240 GIHRGFWFYTIGQRQGLRLPGG------PWYVVEKDVKNNVVFVSRNYFSLDKRRRSFRV 293 Query: 290 QQLHWVDREPFTGTMRCTVKTRYRQTDIPCTVKA-----LDDDRIEVIFDEPVAAVTPGQ 344 L W+ P T + K R+ T C+VK ++ + V E + GQ Sbjct: 294 GSLKWLSGSPTDMTTQLQCKVRHGPTFYDCSVKIELGEDSPEEVVAVHLCEDDQGLAAGQ 353 Query: 345 SAVFYNGEVCLGGGII 360 FY G C+G G+I Sbjct: 354 FTAFYQGRTCIGSGVI 369 >UniRef50_Q6BSZ3 DEHA2D04818p n=6 Tax=Saccharomycetales RepID=Q6BSZ3_DEBHA Length = 415 Score = 409 bits (1051), Expect = e-112, Method: Composition-based stats. Identities = 127/374 (33%), Positives = 193/374 (51%), Gaps = 16/374 (4%) Query: 2 SETAKKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYCTAAADLADAQAV 61 ++IV MS GVDSSV A L ++ V G++M NW + +D D + + Sbjct: 44 PNANDEIIVAMSSGVDSSVCAALYAEKYKNVRGIYMANWSQTAK----CTESDWNDVKKI 99 Query: 62 CDKLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGA 121 C+ L I VNF EYW+ VF+ + Y+ G TPNPD+ CNK +KF +E + Sbjct: 100 CNDLNIPCERVNFEKEYWNEVFQPMVQMYEKGLTPNPDVGCNKYVKFGKMIEHLTKKFSN 159 Query: 122 D---YIATGHYVRRA--DVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKP 176 + ++ TGHY R + LLRG +KDQSY+L + ++Q L P+G L KP Sbjct: 160 NQKWWLVTGHYARIMKCQTSNEYNLLRGYYKSKDQSYYLANIPKRVLSQVLMPIGHLTKP 219 Query: 177 QVRKIAEDLGLVTAKKKDSTGICFIG--ERKFREFLGRYLPAQPGKIITVDGDEIGEHQG 234 VR++A+ L TAKK DS G+CF+ E FR FL Y+ PG IIT DG G+HQG Sbjct: 220 NVRELAKGYNLHTAKKPDSQGLCFVSQDENNFRNFLNEYIAPNPGNIITEDGKIWGQHQG 279 Query: 235 LMYHTLGQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLHW 294 L + T+GQ+ G+ + + W++ +K + N LV+ +G+ + RL GL ++ W Sbjct: 280 LWHATIGQKSGISMPQGDPRYKGIWFISEKRYDTNELVIVKGNNNDRLFKKGLKVKEWSW 339 Query: 295 VDREPFTGTMRCT-----VKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTPGQSAVFY 349 + + + +C V+ R Q + +++ + A+ PGQ+ V Y Sbjct: 340 LMDDISAISEKCEEGNLSVQYRSLQEPEIINSIKISQSDVDIELVKKARAMAPGQNIVLY 399 Query: 350 NGEVCLGGGIIEQR 363 G LG GI+E+ Sbjct: 400 EGNRVLGSGILEET 413 >UniRef50_Q9SYD2 F11M15.16 protein n=14 Tax=Magnoliophyta RepID=Q9SYD2_ARATH Length = 421 Score = 408 bits (1050), Expect = e-112, Method: Composition-based stats. Identities = 133/370 (35%), Positives = 197/370 (53%), Gaps = 17/370 (4%) Query: 1 MSETAKKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEY---CTAAADLAD 57 M E +V V +SGGVDSSV+ LL G+ ++K W ++ E + C DL Sbjct: 1 MPEKPLRVAVLLSGGVDSSVALRLLHAAGHSCTAFYLKIWFQEGFENFWNQCPWEDDLKY 60 Query: 58 AQAVCDKLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAE 117 A+ VC+++ + L V+ EYW+ V + EY+ GRTPNPD+LCN IKF AF++ A Sbjct: 61 AKHVCEQVDVPLEVVHLTDEYWERVVSYIIEEYRCGRTPNPDVLCNTRIKFGAFMD-AIS 119 Query: 118 DLGADYIATGHYVRRAD-----VDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGE 172 D+ DY+ +GHY + D S L D KDQ+YFL LS Q+ + LFP+G Sbjct: 120 DMEYDYVGSGHYAKVVHPPADQNDASSVLELSQDMVKDQTYFLSHLSQTQLKRLLFPLGC 179 Query: 173 LEKPQVRKIAEDLGLVTAKKKDSTGICFIGERKFREFLGRYLPAQPGKIITVD-GDEIGE 231 ++K +VRK+A L +KDS GICF+G+ KF +F+ R++ G I+ + GD +G Sbjct: 180 VKKDEVRKLATQFDLPNKDRKDSQGICFLGKIKFSDFVCRHIGEMEGIILEAESGDFLGN 239 Query: 232 HQGLMYHTLGQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQ 291 H+G ++T+GQR+GL + G PWYVV+KD +NN++ V++ + Sbjct: 240 HRGFWFYTIGQRQGLRLPGG------PWYVVEKDTKNNVVFVSRNYYSIDKRRRIFRVGS 293 Query: 292 LHWVDREPFTGTMRCTVKTRYRQTDIPCTVKALDDDRIE-VIFDEPVAAVTPGQSAVFYN 350 L W +P K R+ C+ + D + V DE + GQ A FY Sbjct: 294 LRWNSGKPSGKVRELRCKVRHGPGFYSCSFEMEGDGDVAVVHLDEDDQGLAAGQFAAFYE 353 Query: 351 GEVCLGGGII 360 G C+G G+I Sbjct: 354 GTTCIGSGVI 363 >UniRef50_Q17440 Probable mitochondrial tRNA-specific 2-thiouridylase 1 n=2 Tax=Chromadorea RepID=MTU1_CAEEL Length = 375 Score = 408 bits (1050), Expect = e-112, Method: Composition-based stats. Identities = 145/369 (39%), Positives = 215/369 (58%), Gaps = 18/369 (4%) Query: 7 KVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWE-EDDGEEYCTAAADLADAQAVCDKL 65 +V++GMSGGVDS+VSA+LL+++G+ V GL M NW+ +++G +C + D +DA+ VCD+L Sbjct: 3 RVVIGMSGGVDSAVSAFLLKKRGFDVIGLHMINWDVQEEGTSHCPRSKDESDARNVCDRL 62 Query: 66 GIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGADYIA 125 I HTVNF EYW++VF FL YK GRT PDI CN+ IKF F + A E AD+IA Sbjct: 63 NIPFHTVNFVKEYWNDVFLKFLENYKNGRTTVPDIDCNQSIKFDVFHKIAREKFNADFIA 122 Query: 126 TGHYV--------RRADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQ 177 TGHY + A + RL G D KDQ++FL T++ EQ+ +++FP+G L+K + Sbjct: 123 TGHYATTNFGDFQQNAKDSDEIRLFSGKDPLKDQTFFLCTVNQEQLKRAMFPLGSLQKSE 182 Query: 178 VRKIAEDLGL-VTAKKKDSTGICFIGERK-FREFLGRYLPAQPGKIITVDGDEIGEHQGL 235 V++IAE+ G AKK +S GICFIG++K F +FL Y+ +PG+I+ +G EIG H G+ Sbjct: 183 VKRIAEEQGFQEVAKKPESMGICFIGKKKRFSDFLDEYIEPKPGRILLKNGSEIGNHHGI 242 Query: 236 MYHTLGQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLHWV 295 T+G+R + + + ++V + ++ +G HP L + + W+ Sbjct: 243 HQFTIGKR--INGKYLEARSHLGFFVSHIHSDTGDIIACEGSHHPDLYASRFLINHPKWI 300 Query: 296 -DREPFTG--TMRCTVKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTPGQSAVFYN-G 351 +PF + + + IPC V + + VI + A PGQ VFYN Sbjct: 301 RTFDPFNRISSNNFLCRIQRTHPPIPC-VAEKQEQFLSVIPRLALRATAPGQMCVFYNTK 359 Query: 352 EVCLGGGII 360 CLGGG I Sbjct: 360 NECLGGGEI 368 >UniRef50_B7G8R2 Predicted protein (Fragment) n=1 Tax=Phaeodactylum tricornutum CCAP 1055/1 RepID=B7G8R2_PHATR Length = 368 Score = 408 bits (1048), Expect = e-112, Method: Composition-based stats. Identities = 137/369 (37%), Positives = 200/369 (54%), Gaps = 15/369 (4%) Query: 8 VIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDD--GEEYCTAAADLADAQAVCDKL 65 V + +SGGVDSSV+ LL QQGY V ++K W ED+ +C D Q VC++ Sbjct: 1 VALLLSGGVDSSVALNLLVQQGYDVTAFYLKIWLEDELAHLGHCPWEDDYRVCQEVCEQA 60 Query: 66 GIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGADYIA 125 GI L TV+ Y V + E + GRTPNPDI+CN +KF F E A + D++A Sbjct: 61 GIPLETVSLQNAYKSRVIAYTVHEAEQGRTPNPDIMCNSRVKFGCFYE-AIDQREFDFVA 119 Query: 126 TGHYVR--RADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQVRKIAE 183 +GHY + + G RLLR D KDQSYFL TL+ +Q+ + LFP+G L+K QVR +A+ Sbjct: 120 SGHYAQLVKDTETGSMRLLRAPDPIKDQSYFLCTLTQDQLQRVLFPIGHLQKSQVRDLAD 179 Query: 184 DLGLVTAKKKDSTGICFIGERKFREFLGRYLPAQPGKIITV-DGDEIGEHQGLMYHTLGQ 242 + L + DS G+CF+G+ KF EFL YL +PG I+ GD +G+H G+ YHT+GQ Sbjct: 180 EFILPNRLRPDSQGLCFLGKVKFDEFLAVYLGTRPGPIVDAGTGDVVGQHHGVWYHTVGQ 239 Query: 243 RKGLG-IGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLM--SVGLIAQQLHWVDREP 299 RKG+G + + PWYVV KD +++ + ++ + +HW+ + Sbjct: 240 RKGIGRVLDPLATSRGPWYVVAKDPGKDVVYCSNQYDEDIFTASRSEFAVENIHWIAGQA 299 Query: 300 FTGTM-----RCTVKTRYRQTDIPCTVKALD-DDRIEVIFDEPVAAVTPGQSAVFYNGEV 353 + R +K R+ + T++ + +V D + PGQ VFY E Sbjct: 300 PPNLLKGDGGRFVMKIRHGPDLVKGTLRLTNTAGEGDVKLDSKDGGLAPGQYVVFYKDEE 359 Query: 354 CLGGGIIEQ 362 CLG G+I + Sbjct: 360 CLGAGVISE 368 >UniRef50_Q5LIS5 tRNA-specific 2-thiouridylase mnmA 1 n=5 Tax=Bacteroides RepID=MNMA1_BACFN Length = 364 Score = 406 bits (1045), Expect = e-112, Method: Composition-based stats. Identities = 126/375 (33%), Positives = 195/375 (52%), Gaps = 30/375 (8%) Query: 1 MSETAKKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYCTAAADLADAQA 60 M E K+V++GMSGG DSSV+A LL + GY+V G+ + +E + EY L DA+A Sbjct: 1 MMEKNKRVLLGMSGGTDSSVAAMLLLEAGYEVTGVTFRFYEFNGSTEY------LEDARA 54 Query: 61 VCDKLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLG 120 + +LGI T + + + + + F+ EY +G TP P LCN ++K+ L A+++G Sbjct: 55 LAARLGIGHITYDARKVFQEQIIDYFIDEYMSGHTPVPCTLCNNQLKWP-LLAKIADEMG 113 Query: 121 ADYIATGHYVRRADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQVRK 180 Y+ATGHYVR+ +DG + D +KDQS+FL+ L E + + L P+G + K + R Sbjct: 114 IFYLATGHYVRKQWIDGNYYIAPAEDVDKDQSFFLWGLRQEILQRMLLPMGGMTKSEARA 173 Query: 181 IAEDLGLV-TAKKKDSTGICFIGERKFREFLGR-------------YLPAQPGKIITVDG 226 A G +KKKDS G+CF +R FL + Y + G+ + G Sbjct: 174 YAAGRGFEKVSKKKDSIGVCFCP-LDYRSFLKKCLCDESGDKNRNIYRKVERGRFLDESG 232 Query: 227 DEIGEHQGLMYHTLGQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVG 286 + I H+G ++T+GQR+GLGI +V + E N +V+A L Sbjct: 233 NFIAWHEGYPFYTIGQRRGLGI-----QLNRAVFVKEIHPETNEVVLAS---LKSLEKSE 284 Query: 287 LIAQQLHWVDREPFTGTMRCTVKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTPGQSA 346 + + + VD G VK RYR+ + C+V + + + EP++A+ GQ+A Sbjct: 285 MWLKDWNIVDESRLLGCDDVIVKIRYRKQENHCSVTITPEGLLHIRLHEPLSAIAEGQAA 344 Query: 347 VFYNGEVCLGGGIIE 361 FY + LGGGII Sbjct: 345 AFYKDGLLLGGGIIT 359 >UniRef50_D0ND99 tRNA-specific 2-thiouridylase mnmA, putative n=1 Tax=Phytophthora infestans T30-4 RepID=D0ND99_PHYIN Length = 416 Score = 406 bits (1043), Expect = e-112, Method: Composition-based stats. Identities = 162/394 (41%), Positives = 217/394 (55%), Gaps = 48/394 (12%) Query: 12 MSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDD--GEEYCTAAADLADAQAVCDKLGIEL 69 MSGGVDSSV+A LL++QGY V G++MKNW+ D GE C ++ D Q VC++LGIE Sbjct: 1 MSGGVDSSVAALLLKRQGYHVTGVYMKNWDPSDEEGESACPVDSEYVDVQKVCEQLGIEA 60 Query: 70 HTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGADYIATGHY 129 VN YW+ VF LA Y+ G TPNPDILCN+EIKFKAF EFA + +GAD +ATGHY Sbjct: 61 QMVNLVQSYWNQVFAPCLAGYEEGLTPNPDILCNREIKFKAFTEFA-KQIGADCVATGHY 119 Query: 130 V--RRADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQVRKIAEDLGL 187 R A+ G L D +KDQSYFL ++ + A LFP+G + K +VR+IAE GL Sbjct: 120 AALRPAEKGGPPNLCAAEDESKDQSYFLSSVDGKAFANVLFPLGGMRKTEVRQIAESEGL 179 Query: 188 VTAKKKDSTGICFIGERKFREFLGRYLPAQPGKIITVDGDEIGEHQGLMYHTLGQRKGLG 247 TA KKDS GICFIG+R F +F+ +Y+ Q G TV G+++ H G +T+GQ L Sbjct: 180 CTATKKDSVGICFIGKRNFADFIHQYIQRQDGYFYTVGGEKMHPHHGFTAYTVGQGARL- 238 Query: 248 IGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIA--QQLHWVDREPFT---- 301 +G W+VV K ++ ++VA+G +P L S L A +Q +W+ + Sbjct: 239 -----QGMSAKWFVVGKHKFDHSVIVAEGTRNPALFSDALFASAEQFNWMAGDLPPELRD 293 Query: 302 -GTMRCTVKTRYRQTDIPCTVKALDDDR-----------------------------IEV 331 G MRC + RYRQ CT+ + + + V Sbjct: 294 TGRMRCFYRVRYRQDLDKCTISLVSNREARASASKLHDWQPELVANEEGVENGEKIYLRV 353 Query: 332 IFDEPVAAVTPGQSAVFYNGE-VCLGGGIIEQRL 364 FD P VTP Q+ V Y + +C GGG I Sbjct: 354 DFDHPQRGVTPEQALVLYRSDGLCYGGGPIAAAG 387 >UniRef50_B1I677 tRNA-specific 2-thiouridylase mnmA n=1 Tax=Candidatus Desulforudis audaxviator MP104C RepID=MNMA_DESAP Length = 343 Score = 405 bits (1042), Expect = e-111, Method: Composition-based stats. Identities = 125/358 (34%), Positives = 185/358 (51%), Gaps = 26/358 (7%) Query: 8 VIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYCTAAADLADAQAVCDKLGI 67 V V +SGGVDSS +A L+++ G++V L M + E A V LG+ Sbjct: 4 VAVALSGGVDSSTTALLMKEAGHRVFTLTMATNDRVAAE-----------AARVSAFLGL 52 Query: 68 ELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGADYIATG 127 H ++ + + V F A Y GRTPNP I CN+++K+ A E GADY ATG Sbjct: 53 PHHVLDISGLFEQRVIGPFCAAYLEGRTPNPCIACNRDLKYGTLFRQAVE-WGADYFATG 111 Query: 128 HYVRR--ADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQVRKIAEDL 185 HY R G+ LLR D KDQSY L+ L E++A+ L P+G+L K VR+ A Sbjct: 112 HYARVRFEPEPGRYVLLRARDPRKDQSYVLFYLDQERLARLLLPLGDLTKETVREKARAA 171 Query: 186 GLVTAKKKDSTGICFIGERKFREFLGRYLP--AQPGKIITVDGDEIGEHQGLMYHTLGQR 243 G+ +S ICF+ +R F+ R G + G+ +G H+G+ ++T+GQR Sbjct: 172 GIP-FTAAESQEICFVAGDDYRTFIRRRCGQAVAEGPFVDRQGNVLGRHRGIPFYTIGQR 230 Query: 244 KGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLHWVDREPFTGT 303 +GLG+ + P +V+ + E N ++V E L +A +H++ +P GT Sbjct: 231 RGLGLALGR-----PVFVLGFNRERNAVIVGPEEE---LWHTAFLAVDVHYILPQPAGGT 282 Query: 304 MRCTVKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTPGQSAVFYNGEVCLGGGIIE 361 + + RYR P + D V+F++P A+TPGQ+AVFY GE +GGGII Sbjct: 283 L-IEAQIRYRAKAAPARLYPQPPDAARVVFEKPQRAITPGQAAVFYQGERVVGGGIIS 339 >UniRef50_B8CCP6 tRNA-methyltransferase (Fragment) n=1 Tax=Thalassiosira pseudonana RepID=B8CCP6_THAPS Length = 392 Score = 404 bits (1039), Expect = e-111, Method: Composition-based stats. Identities = 136/386 (35%), Positives = 207/386 (53%), Gaps = 24/386 (6%) Query: 2 SETAKKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGE--EYCTAAADLADAQ 59 + V + +SGGVDSSV+ LL +Q Y V +++ W ED+ C DL Q Sbjct: 7 TTRKPTVAMLLSGGVDSSVAMHLLLRQNYNVTAFYLRIWLEDELSHLGECPWEDDLQVCQ 66 Query: 60 AVCDKLG-IELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAED 118 +VC+ G + L TV+ EY + V + + E + GRTPNPDI+CN +KF FLE+ E Sbjct: 67 SVCEHAGNVSLETVSLGKEYRERVVQYTIEEAQRGRTPNPDIMCNSRVKFGCFLEYIEES 126 Query: 119 -LGADYIATGHYVRRADVDGKS-----RLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGE 172 + DY+A+GHY + D D S RL R D KDQSYFL L+ +Q+++ +FP+GE Sbjct: 127 GMDFDYVASGHYAQLKDDDDTSSISQKRLFRAPDPVKDQSYFLCALTQKQLSKVIFPIGE 186 Query: 173 LEKPQVRKIAEDLGLVTAKKKDSTGICFIGERKFREFLGRYLPAQPGKIIT-VDGDEIGE 231 +K +VR++A L + DS G+CF+G+ +F +FL YL +PG ++ ++GD IG Sbjct: 187 YQKSEVRELATQFQLPNRNRPDSQGLCFLGKVRFDDFLASYLGDRPGDVVDALNGDVIGR 246 Query: 232 HQGLMYHTLGQRKGLG-IGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRL--MSVGLI 288 H GL YHT+GQRKG+G + + PWYVV KD E +I+ V+ ++ Sbjct: 247 HNGLWYHTVGQRKGIGKVMFPLATAKGPWYVVAKDQERDIVYVSNRYDEDDFAQARSEFE 306 Query: 289 AQQLHWVDREPFTG--------TMRCTVKTRYRQTDIPCTVKALDDDRI-EVIFDEPVAA 339 + + W+ E +R +K R+ + T+ DD + + D+ Sbjct: 307 VEDVRWLAGEAPMNAHHEKSWHEVRLDMKIRHGPRVVQGTLMLKDDGSVGNIRLDQKDGG 366 Query: 340 VTPGQSAVFYNGE--VCLGGGIIEQR 363 + PGQ VFY + CLG +I ++ Sbjct: 367 LAPGQYVVFYQPDTLECLGAAVISEK 392 >UniRef50_Q8R5X3 tRNA-specific 2-thiouridylase mnmA 1 n=16 Tax=Fusobacterium RepID=MNMA1_FUSNN Length = 362 Score = 404 bits (1038), Expect = e-111, Method: Composition-based stats. Identities = 143/368 (38%), Positives = 212/368 (57%), Gaps = 32/368 (8%) Query: 2 SETAKKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYCTAAADLADAQAV 61 + + +V V MSGGVDSS A+LL+QQGY + G+ MK ++++D DA+ V Sbjct: 20 NNSNIRVGVAMSGGVDSSTVAYLLKQQGYDIFGVTMKTFKDEDS-----------DAKKV 68 Query: 62 CDKLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGA 121 CD LGIE + ++ E+ + V + F+ EY GRTPNP ++CN+ IKF L+F A Sbjct: 69 CDDLGIEHYILDVRDEFKEKVVDYFVNEYMNGRTPNPCMVCNRYIKFGKMLDFILSK-DA 127 Query: 122 DYIATGHYVRRADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQVRKI 181 ++ATGHY + L G DSNKDQ YFL + ++++ +FPVG+LEK ++R++ Sbjct: 128 SFMATGHYTKL----KNGLLSVGDDSNKDQVYFLSQIEKNKLSKIIFPVGDLEKTKLREL 183 Query: 182 AEDLGLVTAKKKDSTGICFIGERKFREFL---GRYLPAQPGKIITVDGDEIGEHQGLMYH 238 AE LG+ KKDS ICF+ + K ++FL + +PG I+ +G+ +G+H+G ++ Sbjct: 184 AEQLGVRVYSKKDSQEICFVDDGKLKQFLIENTKGKAEKPGNIVDKNGNILGKHKGFSFY 243 Query: 239 TLGQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLHWVDRE 298 T+GQRKGLGI +EEP YV+ D + N ++V Q + L LIA +L+ Sbjct: 244 TIGQRKGLGIS-----SEEPLYVLAFDRKTNNIIVGQNED---LFRDELIATRLNLFSVS 295 Query: 299 PFTG--TMRCTVKTRYRQTDIPCTVKALDDDRIEVIF-DEPVAAVTPGQSAVFYNGE-VC 354 G + C KTR R C +K D+ +V F D V A+TPGQ VFYN + Sbjct: 296 SLEGLDNLECFAKTRSRDILHKCLLKKDGDN-FQVKFIDNKVRAITPGQGIVFYNNDGNV 354 Query: 355 LGGGIIEQ 362 + GG IE+ Sbjct: 355 IAGGFIEK 362 >UniRef50_C7MLV9 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase n=1 Tax=Cryptobacterium curtum DSM 15641 RepID=C7MLV9_CRYCD Length = 394 Score = 402 bits (1035), Expect = e-111, Method: Composition-based stats. Identities = 154/356 (43%), Positives = 207/356 (58%), Gaps = 12/356 (3%) Query: 7 KVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYCTAAADLADAQAVCDKLG 66 +V+VG+SGGVDSSV A LL + G+ V G +MKNW D C A DLADA+ V +LG Sbjct: 50 RVLVGLSGGVDSSVCAALLVETGWDVCGAYMKNWTMDVPGMRCPWADDLADAKRVAVRLG 109 Query: 67 IELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGADYIAT 126 I+ +F Y V + + EY+AGRTPNPD++CN+++KF F + A +D G DYIAT Sbjct: 110 IDFRVYDFQEAYKREVVDYLVDEYRAGRTPNPDVMCNQQVKFGLFFDAAQDD-GFDYIAT 168 Query: 127 GHYVRRADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQVRKIAEDLG 186 GHY R + RLLR D++KDQ+YFLY +S + +A ++FP+G L K QVR AE Sbjct: 169 GHYARASHD--PVRLLRAADTHKDQTYFLYRMSSDAVAHTIFPLGGLLKTQVRAAAEQRN 226 Query: 187 LVTAKKKDSTGICFIGERKFREFLGRYLPAQPGKIITVD-GDEIGEHQGLMYHTLGQRKG 245 L TA K DS GICF+GE +FL Y+ QPG II D G+ +G H G ++ T+GQR G Sbjct: 227 LSTAHKADSQGICFVGEAGICDFLSLYVHPQPGPIIDDDTGETVGYHDGAIFFTIGQRHG 286 Query: 246 LGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLHWVDREPFTGTMR 305 LGIGG + + VV KD+++NIL V G P S+ L ++ W+ P Sbjct: 287 LGIGGGR-----RYRVVRKDMDHNILYVHDGPLAPVQDSL-LELDRVRWIADVPPQEGA- 339 Query: 306 CTVKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTPGQSAVFYNGEVCLGGGIIE 361 C V+T + + V + AV GQS V Y G+ CLGGGI+ Sbjct: 340 CEVRT-HHGEKLLAATLLATATTATVQLEADHDAVASGQSVVIYRGQECLGGGIVR 394 >UniRef50_D2V0M5 Predicted protein n=1 Tax=Naegleria gruberi RepID=D2V0M5_NAEGR Length = 408 Score = 402 bits (1035), Expect = e-111, Method: Composition-based stats. Identities = 151/384 (39%), Positives = 218/384 (56%), Gaps = 37/384 (9%) Query: 5 AKKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWE---EDDGEEYCTAAADLADAQAV 61 +++VGMSGGVDSS++A LL++ G+ V L M+NW+ ED E+CT D D + + Sbjct: 31 QIRIVVGMSGGVDSSLTACLLKEFGFDVVSLHMRNWDSSEEDPSREHCTFTKDWNDVKVI 90 Query: 62 CDKLGIEL-----HTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAA 116 C+ GI+ H V F +YW++VFE L Y G+TPNPD+ CNK IKF A L +A Sbjct: 91 CETFGIKHVGSSFHPVEFIDQYWNDVFEKLLDGYSIGQTPNPDLFCNKFIKFDAMLNYAI 150 Query: 117 EDLGADYIATGHYVRRADVDG----KSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGE 172 E GADYIATGHY + D + LLR +D +KDQSYFL ++ + +SLFP+G+ Sbjct: 151 EKGGADYIATGHYAQLGYSDNGETSNTHLLRAIDHSKDQSYFLSFVNKKAFEKSLFPLGQ 210 Query: 173 -LEKPQVRKIAEDL-GLVTA--KKKDSTGICFIGERKFREFLGRYLPAQPGKIITVD--G 226 L+K +VR +A D +KDS GICFIG+RKF++FL +Y+ + G I++++ Sbjct: 211 FLKKEEVRVLARDHFKFPNELWGRKDSVGICFIGKRKFKDFLSKYIDSSKGNIVSIEDKT 270 Query: 227 DEIGEHQGLMYHTLGQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVG 286 +GEH G ++T+GQ G G +E W+V +KD +NNIL V G+ HP L+ Sbjct: 271 TILGEHDGASFYTIGQ------GMCLSGMKEKWFVCEKDFKNNILYVCPGNNHPSLLKSS 324 Query: 287 LIAQQLHWVDREPFTGTMRCTVKTRYRQT-DIPCTVKALDDDRI-EVIF---DEPVAAVT 341 HW+ E + VK RY Q C V +D + ++ +EP + Sbjct: 325 FTISNCHWL--ENIDNSKEYFVKVRYNQREPFRCKVSYSNDSSLCDITLADSEEPARGIA 382 Query: 342 PGQSAVFYN------GEVCLGGGI 359 GQ AV Y+ ++C+GGGI Sbjct: 383 SGQIAVLYDSNSQFSEQICVGGGI 406 >UniRef50_Q0ARV1 tRNA-specific 2-thiouridylase mnmA n=67 Tax=Alphaproteobacteria RepID=MNMA_MARMM Length = 405 Score = 402 bits (1034), Expect = e-111, Method: Composition-based stats. Identities = 127/362 (35%), Positives = 195/362 (53%), Gaps = 18/362 (4%) Query: 7 KVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDG---EEYCTAAADLADAQAVCD 63 +V+V MSGGVDSSV+A LL GY V G+ ++ ++ + C A D+ DA+ V + Sbjct: 37 RVVVAMSGGVDSSVTAALLHHLGYDVVGVTLQLYDHGAAMAKKGACCAGQDIYDAKRVAE 96 Query: 64 KLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGADY 123 G + +++ + + + V E F Y AG TP P + CN+ +KF L A LGA Sbjct: 97 ACGFRHYVLDYESRFREAVIEEFADTYLAGFTPIPCVRCNQTVKFADLL-TTARQLGAVC 155 Query: 124 IATGHYVRRADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQVRKIAE 183 +ATGHY++R D + L R D+ KDQSYFL+ +H+Q+ FP+G L K Q R++AE Sbjct: 156 MATGHYIQRVDGPNGAELRRAADAGKDQSYFLFATTHDQLDFLRFPLGHLNKDQTRELAE 215 Query: 184 DLGLVTAKKKDSTGICFIGERKFREFLGRYLP--AQPGKIITVDGDEIGEHQGLMYHTLG 241 GL+ A K DS ICF+ ++ + + + P ++PG+I+ VDG +G H+G++ +T+G Sbjct: 216 AFGLIVADKPDSQDICFVPNGRYVDIVEKVRPGASRPGEIVHVDGRVLGTHEGVIRYTVG 275 Query: 242 QRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLHWVDREPFT 301 QR+GL I +P YVV D +VV L + + ++W+ E Sbjct: 276 QRRGLKI-----AVGDPLYVVRLDAAKAEVVVGPRE---ALEIDTIALKDINWLGDEAPL 327 Query: 302 GTMRCTVKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTPGQSAVFY---NGEVCLGGG 358 VK R + +P + ++D D I V+ V PGQ+ VFY + + LGGG Sbjct: 328 DGAPVRVKVRSTRPPVPAAL-SVDGDDIRVVLARGEEGVAPGQACVFYSSDDEDRVLGGG 386 Query: 359 II 360 I Sbjct: 387 WI 388 >UniRef50_Q8A2F1 tRNA-specific 2-thiouridylase mnmA 2 n=8 Tax=Bacteroides RepID=MNMA2_BACTN Length = 370 Score = 402 bits (1034), Expect = e-110, Method: Composition-based stats. Identities = 130/386 (33%), Positives = 198/386 (51%), Gaps = 40/386 (10%) Query: 1 MSETAKKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYCTAAADLADAQA 60 M E K+V++GMSGG DSSV+A L + GY+V G+ + +E +D EY L DA+ Sbjct: 1 MMEENKRVLLGMSGGTDSSVAAMRLLEAGYEVTGVTFRFYELNDSTEY------LEDARH 54 Query: 61 VCDKLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLG 120 + ++LGI T + + + E F+ EY G TP P LCN +K+ L A+++G Sbjct: 55 LAERLGIRHITYDAREIFRKQIIEYFVHEYMVGHTPVPCTLCNNYLKWP-LLSKIADEMG 113 Query: 121 ADYIATGHYVRRADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQVRK 180 YIATGHYVR+ VD + DS+KDQ++FL+ L + + + L P+G++ K + R Sbjct: 114 IFYIATGHYVRKVKVDDTCYITYAADSDKDQTFFLWGLKQDILRRMLLPMGDITKVEARA 173 Query: 181 IAEDLGL-VTAKKKDSTGICFIGERKFREFLGRYL-----------------------PA 216 A + G A K+DS G+CF +R FL +L Sbjct: 174 FAAERGFQKVAVKRDSLGVCFCP-MDYRSFLKMWLVSNCQPQVSVGQPQVSAGQTWSAEV 232 Query: 217 QPGKIITVDGDEIGEHQGLMYHTLGQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQG 276 + G+ + GD I H+G ++T+GQR+GLGI + +V + E N +V+A Sbjct: 233 RRGRFVDEKGDFIAWHEGYPFYTVGQRRGLGIHLNRA-----VFVKEIRPEKNEVVLAS- 286 Query: 277 HEHPRLMSVGLIAQQLHWVDREPFTGTMRCTVKTRYRQTDIPCTVKALDDDRIEVIFDEP 336 L ++ + + V+RE G VK RYR+ + CTV D+ + V EP Sbjct: 287 --LQALEKTEMLLKDWNIVNRERLLGHADIIVKIRYRKQENHCTVTVTLDNFLHVQLHEP 344 Query: 337 VAAVTPGQSAVFYNGEVCLGGGIIEQ 362 + A+ GQ+A FY + LGGGII + Sbjct: 345 LTAIASGQAAAFYKDGLLLGGGIIVE 370 >UniRef50_A2CB44 tRNA-specific 2-thiouridylase mnmA n=60 Tax=cellular organisms RepID=MNMA_PROM3 Length = 409 Score = 402 bits (1033), Expect = e-110, Method: Composition-based stats. Identities = 141/381 (37%), Positives = 208/381 (54%), Gaps = 36/381 (9%) Query: 6 KKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYCTAAADLADAQAVCDKL 65 ++V VG+SGGVDSS+SA LL + G+QVEGL + W G+ C + L DA +C++L Sbjct: 35 QRVAVGLSGGVDSSLSAALLVEAGWQVEGLTL--WLMS-GKGACCSDG-LIDAAGICEQL 90 Query: 66 GIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGADYIA 125 I H V+ A + + + + Y+ G TP P CN+ +KF A L +A ++ +A Sbjct: 91 KIPHHVVDSRATFQAEIVDQLVQGYQQGVTPLPCSRCNRSVKFAAMLSWAEKERQLHRVA 150 Query: 126 TGHYVRRADVD-------------GKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGE 172 TGHY R + G+ +LLRGLD NKDQSYFLY LS + +A+ +FP+GE Sbjct: 151 TGHYARIRHREDPEPQQALPGDSSGRHQLLRGLDQNKDQSYFLYDLSQDVLAKVIFPLGE 210 Query: 173 LEKPQVRKIAEDLGLVTAKKKDSTGICFIGE-RKFREFLGRYLPAQPGKIITVDGDEIGE 231 L K + R+ AE GL TAKK +S +C + FL YLPA+ G+I+ DG +GE Sbjct: 211 LTKAETRQEAERYGLRTAKKAESQDLCLADHYGSMKAFLDNYLPARQGEIVLQDGKVVGE 270 Query: 232 HQGLMYHTLGQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQ 291 H G+ + T+GQRKGLG+ EP +VV D N ++VA E R + Sbjct: 271 HDGIEHFTIGQRKGLGV-----AWREPLHVVQLDATANRVIVAPRAEAGR---DSCVVGA 322 Query: 292 LHWVDREPFTGTMRCTVKTRYRQTDIPCTVKALD----------DDRIEVIFDEPVAAVT 341 ++W+ P + + V+ RYR + + ++ R + F+E ++T Sbjct: 323 VNWISIAPPSSAIDVEVQVRYRSGPVAAQLIPIEATAEDIAADRPHRCRLTFNEEQFSIT 382 Query: 342 PGQSAVFYNGEVCLGGGIIEQ 362 PGQ+AVFY + LGGG+I+Q Sbjct: 383 PGQAAVFYAADAVLGGGLIQQ 403 >UniRef50_A5IJQ4 tRNA-specific 2-thiouridylase mnmA n=7 Tax=Thermotogaceae RepID=MNMA_THEP1 Length = 358 Score = 401 bits (1032), Expect = e-110, Method: Composition-based stats. Identities = 128/367 (34%), Positives = 202/367 (55%), Gaps = 20/367 (5%) Query: 7 KVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEED------DGEEYCTAAADLADAQA 60 KV V +SGGVDS+V+ +LL ++G++V+ MK E++ ++ C + +D ADA Sbjct: 2 KVGVALSGGVDSAVALYLLLKEGHEVKAFHMKTKEDEFFIRKEIKKKVCCSPSDTADAMR 61 Query: 61 VCDKLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLG 120 + LG+E+ V+ + + V E F ++ G TPNP + CN+ +KF +++ G Sbjct: 62 IAHFLGVEIEIVDVKEIFREKVIEPFKSDLLKGLTPNPCVHCNRFVKFGYLMDYVLNQ-G 120 Query: 121 ADYIATGHYVRRA--DVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQV 178 D A+GHY R + G+ + +G+D KDQSYFL + +I + +FP G K ++ Sbjct: 121 FDAFASGHYARIEFSEKYGRKVIKKGVDLKKDQSYFLARIEPWRIERLIFPNGIYTKEEI 180 Query: 179 RKIAEDLGLVTAKKKDSTGICFIGERKFREFLGRY-LPAQPGKIITVDGDEIGEHQGLMY 237 RKIAE+ G+ AKK++S +CFI + FL + + G +IT +G+ +G H G Sbjct: 181 RKIAEEAGIHVAKKQESQDVCFIPDGSIENFLKDEGITLKEGDLITPEGEVVGRHFGYPL 240 Query: 238 HTLGQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLHWVDR 297 +T+GQRKG I E +YV K E N++VV + + GLIA+ W Sbjct: 241 YTIGQRKGFKI----EKFGRRYYVRGKIPEKNVVVV---SDLEDVFFSGLIAEDPVWHVE 293 Query: 298 EPFTGTMRCTVKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTPGQSAVFYNGEVCLGG 357 P +C + R + + P VK D+ +EV F++ V AVTPGQ A FY+G+ LGG Sbjct: 294 VP--EEFKCVCRVRKKSEEAPAVVKLR-DNEVEVRFEKKVFAVTPGQIAAFYDGDTLLGG 350 Query: 358 GIIEQRL 364 II++ + Sbjct: 351 AIIKEGI 357 >UniRef50_Q1AWB1 tRNA-specific 2-thiouridylase mnmA n=1 Tax=Rubrobacter xylanophilus DSM 9941 RepID=MNMA_RUBXD Length = 488 Score = 399 bits (1027), Expect = e-110, Method: Composition-based stats. Identities = 126/361 (34%), Positives = 193/361 (53%), Gaps = 19/361 (5%) Query: 5 AKKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYCTAAADLADAQAVCDK 64 + V+ MSGGVDS+V+A LL+++GY+V + + + + G C + + A+ Sbjct: 143 RRGVVAAMSGGVDSAVTALLLKERGYEVVAVTFRLHDGEPGSRSCCSPDTVLFARETAHG 202 Query: 65 LGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGADYI 124 LGI T+N + V F+ Y AGRTPNP + CN +KF A F A+ LG ++ Sbjct: 203 LGIPHFTLNLRELFDRRVMRDFVGSYAAGRTPNPCVACNAHVKFHA-AAFLADRLGLRHV 261 Query: 125 ATGHYVRRADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQVRKIAED 184 ATGHY R + L R D KDQ+Y L+ + + +++FP+G+ K +VR+IAE+ Sbjct: 262 ATGHYARVGE---GPCLERPEDGRKDQTYVLWPVPPRLLGRTIFPLGDYRKSEVRRIAEE 318 Query: 185 LGLVTAKKKDSTGICFIGERKFREFLGRYLPAQPGKIITVDGDEIGEHQGLMYHTLGQRK 244 GL A+ +S ICFI + +R F+ R + ++PG+I+ G +G H G++ T+GQR+ Sbjct: 319 RGLAVARTPESQDICFIPDGDYRSFVRRRVRSEPGEIVDRQGRVLGRHAGVVDFTVGQRR 378 Query: 245 GLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLHWVDREPFTGTM 304 GLGI P YV + + +VV E L ++ + +W +P + Sbjct: 379 GLGISA-----PTPLYVTEVRPRSRQVVVGSRRE---LEVRRMLVRGANWF-LDPREAAL 429 Query: 305 RCTVKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTPGQSAVFY--NGEVCLGGGIIEQ 362 V+ RY +PC ++ EV EPV V PGQSAVFY +G +GGGII + Sbjct: 430 ---VQVRYNGEPVPCELEE-GAGGWEVALLEPVFGVAPGQSAVFYTRDGAKVVGGGIIAR 485 Query: 363 R 363 R Sbjct: 486 R 486 >UniRef50_C0QG63 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QG63_DESAH Length = 365 Score = 398 bits (1024), Expect = e-109, Method: Composition-based stats. Identities = 139/356 (39%), Positives = 206/356 (57%), Gaps = 24/356 (6%) Query: 9 IVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYCTAAADLADAQAVCDKLGIE 68 + MSGG+DS V+A +L++QG+ + G+ E + D ++ D+L I+ Sbjct: 31 AIAMSGGIDSLVAAHVLKRQGHDLVGIHFTTGFESEAV----------DLSSIEDQLDIK 80 Query: 69 LHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGADYIATGH 128 +H ++ +AE+ V + F+ Y G+TPNP ++CN+ IKF + A + LGA+ IATGH Sbjct: 81 IHQMDLSAEFNRAVVDYFVKTYARGKTPNPCVVCNRTIKFGVLAQRA-KTLGAEKIATGH 139 Query: 129 YVR-RADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQVRKIAEDLGL 187 Y R +G L++G+D KDQSYFL LS EQ+ Q++FP+G + K QVR IA D L Sbjct: 140 YAGTRTRSNGGIALVKGVDGVKDQSYFLAMLSQEQLKQAVFPLGRMTKEQVRNIARDNRL 199 Query: 188 VTAKKKDSTGICFIGERKFREFLGRYL--PAQPGKIITVDGDEIGEHQGLMYHTLGQRKG 245 + ++K+S ICFI F F+ L P PG I+ DG +G H+GL +T+GQR+G Sbjct: 200 MPVEEKESQDICFIKAPGFSGFVAARLSTPPSPGDIVLTDGTVVGRHRGLHRYTIGQRRG 259 Query: 246 LGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLHWVDREPFTGTMR 305 L G EP+YV D+ENN+LVV E L ++ + L+W+ P +++ Sbjct: 260 LNSPG-----PEPYYVKTIDMENNLLVVGGKKE---LYTIKVAVGDLNWI-TPPLASSLK 310 Query: 306 CTVKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTPGQSAVFYNGEVCLGGGIIE 361 T K RY T+ ++++DR ++FD P AVTPGQ AVFY E LG GII+ Sbjct: 311 VTTKIRYSHKGAASTL-SIENDRTTLVFDAPQLAVTPGQVAVFYRDEEVLGAGIIQ 365 >UniRef50_A6LIF1 tRNA-specific 2-thiouridylase mnmA n=28 Tax=Bacteroidales RepID=MNMA_PARD8 Length = 358 Score = 397 bits (1022), Expect = e-109, Method: Composition-based stats. Identities = 133/360 (36%), Positives = 197/360 (54%), Gaps = 16/360 (4%) Query: 8 VIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKN-WEEDDGEEYCTAAADLADAQAVCDKLG 66 + +SGGVDSSV L++ GY +++ E+ DG C A D+ + K G Sbjct: 3 IAALVSGGVDSSVVVHQLKEAGYDPTIFYIRIGMEDKDGYIDCPAEEDIEITSYIARKYG 62 Query: 67 IELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGADYIAT 126 V+ EYWD V + K G TPNPD++CNK IKF F E +D D IAT Sbjct: 63 CRFEIVSLHDEYWDRVVSYTIESVKRGLTPNPDMMCNKYIKFGCFEEKWGKDF--DKIAT 120 Query: 127 GHYVRRADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQVRKIAEDLG 186 GHY ++DGK+ L D KDQ+ FL ++ QI + +FP+G L K +VR IAE Sbjct: 121 GHYATTTEIDGKTWLSTAKDPVKDQTDFLGQITRLQIQKLMFPIGHLMKSEVRAIAEAQK 180 Query: 187 LVTAKKKDSTGICFIGERKFREFLGRYLPAQPGKIITVD-GDEIGEHQGLMYHTLGQRKG 245 L +AK+KDS GICF+G+ + +F+ RYL +PGKI+ ++ G +G+H G +HT+GQRKG Sbjct: 181 LPSAKRKDSQGICFLGKINYNDFIERYLGKRPGKIVELETGKVLGKHNGYWFHTIGQRKG 240 Query: 246 LGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLHWVDREP---FTG 302 LG+ G PW+V+ KD++ NI+ V+ G++ + Q ++ +P F G Sbjct: 241 LGLSGG------PWFVIQKDIKRNIIYVSNGYDPETQYGKVINMQGFDFITEDPWGEFEG 294 Query: 303 TMRCTVKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTPGQSAVFYNGE--VCLGGGII 360 T K R+ ++ + D V DE + + PGQ +V Y+ + +CLG G+I Sbjct: 295 EKEITFKIRHTPEFTHGYIRRIGD-LYRVESDEKIQGIAPGQYSVIYDKDHHLCLGSGMI 353 >UniRef50_D1N0N9 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase n=1 Tax=Victivallis vadensis ATCC BAA-548 RepID=D1N0N9_9BACT Length = 358 Score = 397 bits (1020), Expect = e-109, Method: Composition-based stats. Identities = 139/365 (38%), Positives = 189/365 (51%), Gaps = 15/365 (4%) Query: 5 AKKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEED---DGEEYCTAAADLADAQAV 61 +KVIV +SGGVDSSV+A L QQ G +V G+ ++ D + C + D A +++ Sbjct: 2 KEKVIVALSGGVDSSVAAVLAQQAGCEVIGVTLRLKHPDPEFSAAQLCASKNDEAAVESI 61 Query: 62 CDKLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGA 121 C KLGIE H + E+ V EY GRTPNP CN IKF +EFA +GA Sbjct: 62 CAKLGIEHHYLELFPEFECKVLRPAAQEYARGRTPNPCCECNYRIKFGKLVEFA-RSVGA 120 Query: 122 DYIATGHYVRRADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQVRKI 181 + TGHY + ++ G L RG D KDQSYFLY L ++ FPVG ++K +VR+I Sbjct: 121 AKVLTGHYAKLSEHGGVYELRRGDDLKKDQSYFLYRLDQAILSMVRFPVGAMDKGEVRRI 180 Query: 182 AEDLGLVTAKKKDSTGICF-IGERKFREFLGR--YLPAQPGKIITVDGDEIGEHQGLMYH 238 A + GLVT+ K DS CF + F E L R LP +PG G +G H G+ Sbjct: 181 AAEYGLVTSDKPDSQDACFQVPGESFGETLRRLEKLPRRPGLFR-YQGRIVGRHNGVHEF 239 Query: 239 TLGQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLHWVDRE 298 T+GQRKGL + P YV D E+ + + E RL++ +++ W Sbjct: 240 TIGQRKGLNVALGV-----PAYVAGIDPESGDIRL--ETEPERLLASRFTVERVSWQSGR 292 Query: 299 PFTGTMRCTVKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTPGQSAVFYNGEVCLGGG 358 + V+ RYR +PC V+ V P AVTPGQ+AVFY G++ LGGG Sbjct: 293 APDLSGELEVQIRYRSRAVPCRVEPDGAGGAAVFPAIPQRAVTPGQAAVFYRGDLLLGGG 352 Query: 359 IIEQR 363 +I Sbjct: 353 VIGHA 357 >UniRef50_A8SJM7 Putative uncharacterized protein n=1 Tax=Parvimonas micra ATCC 33270 RepID=A8SJM7_9FIRM Length = 350 Score = 396 bits (1018), Expect = e-109, Method: Composition-based stats. Identities = 125/359 (34%), Positives = 209/359 (58%), Gaps = 17/359 (4%) Query: 12 MSGGVDSSVSAWLLQQQGYQVEGLFMKNWEED---DGEEYCTAAADLADAQAVCDKLGIE 68 MSGGVDS V+ LL ++GY+V G+ M + D E+ C + + + DA+ V + +G++ Sbjct: 1 MSGGVDSCVACHLLLKEGYEVIGVTMNLVPKGHLYDEEKGCCSLSSVMDAKIVAEAMGVK 60 Query: 69 LHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGADYIATGH 128 +T++F E+ V E F+ EY G TPNP + CNK IKF +F++ L AD+I+TGH Sbjct: 61 HYTMSFREEFDRKVIENFVREYSLGYTPNPCVACNKYIKFNSFVDK-IRPLKADFISTGH 119 Query: 129 YVRRADVDG--KSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQVRKIAEDLG 186 Y + + L R DS KDQ+YFLY S E ++++LFP+ +LEK +VR+IA+D Sbjct: 120 YAKVEFDKNYNRYLLKRAKDSKKDQTYFLYNTSQEVLSKTLFPLADLEKEKVRQIAKDEN 179 Query: 187 LVTAKKKDSTGICFIGERKFREFLGRYLPA--QPGKIITVDGDEIGEHQGLMYHTLGQRK 244 ++T KKDS ICF+ R F+ + P + G + +G+++G+H+G++Y+T+GQRK Sbjct: 180 ILTYSKKDSEEICFVQNRDHGLFIKQRNPELIKEGYFVDENGNKLGKHKGIVYYTVGQRK 239 Query: 245 GLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLHWVDREPFTGTM 304 GLGI K +V + +N + + + L + ++ +++ + + Sbjct: 240 GLGIALGK-----RVFVSKINAIDNTVTL---SDEDALYKNKIRIREENFIPFDALEKPL 291 Query: 305 RCTVKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTPGQSAVFYNGEVCLGGGIIEQR 363 +VK R+ Q++ + ++D + V F++ V A GQSAVFY ++ +GGGII++ Sbjct: 292 EVSVKVRHGQSETKGLLFYKNND-LFVEFEKQVRAPNKGQSAVFYLDDIVVGGGIIDEV 349 >UniRef50_Q0SMH1 tRNA-specific 2-thiouridylase mnmA n=25 Tax=Bacteria RepID=MNMA_BORAP Length = 355 Score = 396 bits (1018), Expect = e-109, Method: Composition-based stats. Identities = 127/362 (35%), Positives = 200/362 (55%), Gaps = 13/362 (3%) Query: 7 KVIVGMSGGVDSSVSAWLLQQQGY-QVEGLFMKNWEEDDGE--EYCTAAADLADAQAVCD 63 K+ V +SGGVDSSV+ + + +GY ++ ++K W ED+ C DL +AVC Sbjct: 2 KIAVLLSGGVDSSVALYRIINKGYTSIKCYYLKIWLEDELSYIGSCPWQEDLNYVEAVCS 61 Query: 64 KLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGADY 123 K + +NF EY++ V + E K G TP+PDI CN+ IKF AF E E D Sbjct: 62 KFNVPYEIINFQKEYYNKVVSYTIKELKNGNTPSPDIFCNQRIKFGAFFEKINEQY--DL 119 Query: 124 IATGHYVRRADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQVRKIAE 183 + TGHY + D K L + D KDQSYFL LS +Q+++ FP+G L K +VR+IA+ Sbjct: 120 VVTGHYAKIQTKDKKFFLKQAKDKIKDQSYFLSHLSQKQMSKLYFPLGTLLKSEVRQIAK 179 Query: 184 DLGLVTAKKKDSTGICFIGERKFREFLGRYLPAQPGKIITVD-GDEIGEHQGLMYHTLGQ 242 ++ L +KDS GICF+G+ K+ EF+ +L + G II + G IG H G + T+GQ Sbjct: 180 NINLPNKNRKDSQGICFLGKIKYNEFIKYHLGEKKGNIIEKETGKIIGTHNGYWFFTVGQ 239 Query: 243 RKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLHWVDREPFTG 302 R+G+ + PW+V++KD+E NI+ ++ + + + ++HW++ P Sbjct: 240 RRGIKLSNG------PWFVIEKDLEKNIIYISHNENYSKQAKRKFLVHEIHWINGTPSDF 293 Query: 303 TMRCTVKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTPGQSAVFYNGEVCLGGGIIEQ 362 +K R+ + C +K + + IE+ ++ ++PGQ A+FY CLGG I + Sbjct: 294 E-NFKIKIRHGEKKYSCKLKLIAKNLIEISLNKKDYGISPGQFAIFYKNTECLGGAKIFK 352 Query: 363 RL 364 + Sbjct: 353 VM 354 >UniRef50_A9BIS3 tRNA-specific 2-thiouridylase mnmA n=1 Tax=Petrotoga mobilis SJ95 RepID=MNMA_PETMO Length = 367 Score = 396 bits (1017), Expect = e-109, Method: Composition-based stats. Identities = 129/369 (34%), Positives = 203/369 (55%), Gaps = 23/369 (6%) Query: 4 TAKKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEE------DDGEEYCTAAADLAD 57 + KKV++ MSGGVDSSV+A+LL++Q Y V GL K + + ++ C + +D D Sbjct: 2 SNKKVLMLMSGGVDSSVAAYLLKEQNYHVIGLHFKTVSDVVFSLIPEKKKVCCSPSDTQD 61 Query: 58 AQAVCDKLGIE-LHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAA 116 A + DKL ++ V+ E+ + + + F+ YK G+TPNP +LCN+ KF LE A Sbjct: 62 ALKIADKLDLDDFQIVDIKKEFKEKIIDYFIKTYKEGKTPNPCMLCNRFFKFGKALEIA- 120 Query: 117 EDLGADYIATGHYVRRADVDGKSR--LLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELE 174 GAD++++GHY+ + + S + +G+D KDQSYFL + + + FP+G + Sbjct: 121 HSYGADWVSSGHYLIKEYSNKYSTYIIKKGVDQYKDQSYFLSYIDKNTLPKLHFPLGNMY 180 Query: 175 KPQVRKIAEDLGLVTAKKKDSTGICFIGERKFREFLGRY-LPAQPGKIITVDGDEIGEHQ 233 K ++R IA +GL A K DS +CFI + +R FL + + GK+ ++G+EIG H Sbjct: 181 KVEIRDIANKIGLSVANKPDSQELCFIPDNDYRRFLKENGVTTEEGKVYDLEGNEIGTHT 240 Query: 234 GLMYHTLGQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLH 293 G M +T+GQR G+ + +V + N+L+VA E + S LI Q ++ Sbjct: 241 GYMNYTIGQRSGISY---YKNANVKLHVYKIFPQKNVLIVAPTEE---MYSKELIVQNVN 294 Query: 294 -WVDREPFTGTMRCTVKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTPGQSAVFYNG- 351 +VD + G + R + + P VK + D ++V F EP+ AVTPGQ A Y+ Sbjct: 295 FFVDFKEIEG----FCRVRKKSEEKPAVVKKIADHTLKVSFKEPIFAVTPGQFATIYDES 350 Query: 352 EVCLGGGII 360 V L G+I Sbjct: 351 GVVLASGVI 359 >UniRef50_A9A0S9 tRNA-specific 2-thiouridylase mnmA n=1 Tax=Desulfococcus oleovorans Hxd3 RepID=MNMA_DESOH Length = 358 Score = 396 bits (1017), Expect = e-108, Method: Composition-based stats. Identities = 127/363 (34%), Positives = 183/363 (50%), Gaps = 20/363 (5%) Query: 1 MSETAKKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYCTAAADLADAQA 60 + + + V +SGG+DS V+A LL+Q G V + + Sbjct: 12 LESSNPLIAVLVSGGIDSLVAAHLLKQSGADVTAIHFLT--------GYEPEDRAGRLEK 63 Query: 61 VCDKLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLG 120 + ++ I + + + NV + F A Y G TPNP ++CN IKF A +++A LG Sbjct: 64 LFTQMDIPVFIFDCRTVFQSNVVDYFTAAYLRGETPNPCMVCNSRIKFGACMDYA-RSLG 122 Query: 121 ADYIATGHYVRRADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQVRK 180 AD +ATGHY R RL +G D K+QSYFL LS +Q+ ++ FP+ + K QVR Sbjct: 123 ADAVATGHYCRTTKDPDGVRLWKGADPAKEQSYFLAFLSQDQLGRARFPLERMTKDQVRA 182 Query: 181 IAEDLGLVTAKKKDSTGICFIGERKFREFLGRYLP--AQPGKIITVDGDEIGEHQGLMYH 238 A GLV + K+S +CFI + +F+ +P PG I + G IG H GL Sbjct: 183 HAARHGLVPIESKESQDVCFIRGEECADFIEAQVPAIPGPGPIEDMTGRLIGTHSGLHRF 242 Query: 239 TLGQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLHWVDRE 298 T+GQR+G+ E+P+YV D+ N L V + L Q++W+ Sbjct: 243 TVGQRRGINCPA-----EQPYYVAALDMARNCLKVGFRQD---LFVPVCRVAQVNWIPDR 294 Query: 299 PFTGTMRCTVKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTPGQSAVFYNGEVCLGGG 358 P G+M +VK RY QT++P + AL + V F P AV PGQ AVFY+G+ LGGG Sbjct: 295 P-KGSMNVSVKIRYNQTEVPARLTALGETDAVVEFVTPQFAVAPGQGAVFYDGDAVLGGG 353 Query: 359 IIE 361 II Sbjct: 354 IIR 356 >UniRef50_C8W7A2 tRNA(5-methylaminomethyl-2-thiouridylate)-methyl transferase n=2 Tax=Atopobium RepID=C8W7A2_ATOPD Length = 361 Score = 395 bits (1016), Expect = e-108, Method: Composition-based stats. Identities = 146/356 (41%), Positives = 203/356 (57%), Gaps = 11/356 (3%) Query: 8 VIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYCTAAADLADAQAVCDKLGI 67 V +GMSGGVDS++SA LL + GY V+ ++M+NW +D C A DLADA+ VC LGI Sbjct: 5 VYLGMSGGVDSALSAALLLEAGYNVKAIYMRNWSKDLPGFKCPWADDLADAERVCVTLGI 64 Query: 68 ELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGADYIATG 127 +L + AEY V + L Y+ GRTPNPD++CN+ +KF F E A + GA+++ATG Sbjct: 65 DLDVWDCEAEYKATVVDYLLDAYEHGRTPNPDVMCNQTVKFGTFAERAFAE-GANFVATG 123 Query: 128 HYVRRADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGEL-EKPQVRKIAEDLG 186 HY + +V G +LLR D++KDQ+YFL+ + ++LFP+G + K +VR + + G Sbjct: 124 HYAQ--NVPGTKKLLRAADAHKDQTYFLWRVPGHLFERTLFPIGHIATKAEVRSMCAERG 181 Query: 187 LVTAKKKDSTGICFIGERKFREFLGRYLPAQPGKIITVD-GDEIGEHQGLMYHTLGQRKG 245 L K DS GICFIG R FL + G +I + G +G H G T+GQRKG Sbjct: 182 LGIETKPDSDGICFIGPVGLRTFLLDTFQKKQGDVIEWETGKILGTHDGAFLFTVGQRKG 241 Query: 246 LGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLHWVDREPFTGTMR 305 L IGG YVV D N++ V P L + + +HW+ EP R Sbjct: 242 LNIGGGPA-----RYVVATDTLKNVVYVTCDLNCPALWTRRMELSDMHWISGEPAADG-R 295 Query: 306 CTVKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTPGQSAVFYNGEVCLGGGIIE 361 ++TR+ +P T D+ FD+PV V PGQSAV Y+G+ +GGGIIE Sbjct: 296 YVIRTRHTGALVPVTFTLTDNQCGFAEFDQPVKTVAPGQSAVLYDGQEVVGGGIIE 351 >UniRef50_P75365 tRNA-specific 2-thiouridylase mnmA n=2 Tax=Mycoplasma RepID=MNMA_MYCPN Length = 370 Score = 394 bits (1014), Expect = e-108, Method: Composition-based stats. Identities = 137/373 (36%), Positives = 202/373 (54%), Gaps = 23/373 (6%) Query: 4 TAKKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEE------------DDGEEYCTA 51 K V VG+SGGVDS+VSA LL+QQ +V G+FM+ W+ ++ + C++ Sbjct: 2 QNKTVFVGISGGVDSAVSALLLKQQYREVIGIFMECWDNTLNNDQLGHRAFNEHKSGCSS 61 Query: 52 AADLADAQAVCDKLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAF 111 D +AQA+ LGI+L N YW VF + +K G TPNPD+LCN+ IKF Sbjct: 62 KEDFREAQAIAQLLGIKLIKQNLVEPYWKQVFLPTIDAFKNGLTPNPDMLCNRLIKFGLM 121 Query: 112 LEFAAE-DLGADYIATGHYVRRADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPV 170 ++ + D +D+ ATGHY + + + L D +KDQ+YFL + Q+ +FP+ Sbjct: 122 RDYCKQLDPNSDF-ATGHYAALSWDNNQPLLAIPKDKHKDQTYFLAHVKPAQLQDVVFPL 180 Query: 171 GELEKPQVRKIAEDLGLVTAKKKDSTGICFIGERKFREFLGRYLPAQPGKIITVDG-DEI 229 L K +VR+IA A KKDSTGICFIGER F +FL YLP +PG I ++ Sbjct: 181 AHLLKTEVRQIALAHHFSVATKKDSTGICFIGERHFSDFLKNYLPVKPGVIYDWKTQRQL 240 Query: 230 GEHQGLMYHTLGQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIA 289 G H+G+ ++T GQR GL +GG +VV+KD++ N L V+ + L G+ Sbjct: 241 GSHEGVWFYTTGQRSGLNLGGQAARN----FVVEKDLKTNTLYVS--SDPEDLQRRGITL 294 Query: 290 QQLHWVDREPFTGTMRCTVKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTPGQSAVFY 349 +W+ +P T V+ R+ Q + + ++ ++V D+P+ VT GQ V Y Sbjct: 295 SHFNWL-YQPNPLTQTVLVRIRHAQPLVQGHITVQPNNVVQVQLDQPIDRVTNGQYGVLY 353 Query: 350 -NGEVCLGGGIIE 361 +CLG GII Sbjct: 354 TQNGICLGSGIIT 366 >UniRef50_C8WLL2 tRNA(5-methylaminomethyl-2-thiouridylate)-methyl transferase n=1 Tax=Eggerthella lenta DSM 2243 RepID=C8WLL2_EGGLE Length = 352 Score = 394 bits (1014), Expect = e-108, Method: Composition-based stats. Identities = 144/367 (39%), Positives = 200/367 (54%), Gaps = 20/367 (5%) Query: 1 MSETAKKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYCTAAADLADAQA 60 M+ + ++ +GMSGGVDS+VSA LL + GY+V G+ + + E AA A Sbjct: 1 MNASG-RIALGMSGGVDSAVSAALLMRAGYEVVGVTCRFRDNAATERAAADAA------A 53 Query: 61 VCDKLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLG 120 VC +LGI E+ V E F++ Y AG TP+P + CN K A + A E LG Sbjct: 54 VCSQLGIRHEAPGCVGEFERCVVEPFVSSYAAGLTPSPCVGCNARCKMPALVRVAGE-LG 112 Query: 121 ADYIATGHYVRRAD--VDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQV 178 D IATGHY R A G+ + R LD+ KDQSY L LS EQ+A+ + P+G + K +V Sbjct: 113 CDRIATGHYARIARLSDSGRFVVKRALDARKDQSYMLSLLSQEQLARLVLPLGAMTKAEV 172 Query: 179 RKIAEDLGLVTAKKKDSTGICFIGERKFREFLGRY-LPAQPGKIITVDGDEIGEHQGLMY 237 R IA DLGLV A+K +S CFI E +R FL + PG I+ G+ +G H+GL Sbjct: 173 RVIAADLGLVVAEKAESQDNCFI-EGDYRPFLRARGVEDAPGDIVDRMGNVLGCHEGLAN 231 Query: 238 HTLGQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLHWVDR 297 +T+GQRKG+G+ G EP+YVV+K VE LVV E + ++ ++W Sbjct: 232 YTVGQRKGIGVAG-----PEPYYVVEKRVETRELVVGFADET---LIGSVVVGGMNWQAF 283 Query: 298 EPFTGTMRCTVKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTPGQSAVFYNGEVCLGG 357 E + VK RYR C ++ DD R+ + P PGQ AV Y+G+ LGG Sbjct: 284 ESLGESYGAMVKLRYRSRPCACIIEPEDDQRVSLALRSPQPTTAPGQYAVLYDGDTVLGG 343 Query: 358 GIIEQRL 364 G+IE+ + Sbjct: 344 GMIEEVM 350 >UniRef50_A4SBE4 Predicted protein n=2 Tax=Ostreococcus RepID=A4SBE4_OSTLU Length = 389 Score = 394 bits (1013), Expect = e-108, Method: Composition-based stats. Identities = 144/370 (38%), Positives = 206/370 (55%), Gaps = 21/370 (5%) Query: 9 IVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWE--EDDGEEYCTAAADLADAQAVCDKLG 66 +VG+SGGVDS+V+AW L++ G + M+NW+ ++D C+ DL A+A+ +KL Sbjct: 17 VVGLSGGVDSAVAAWALERCGARATATLMRNWDARDEDAATDCSHRDDLKSARAIAEKLN 76 Query: 67 IELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGADYIAT 126 + +F EYW VFE ++ +++G TPNPD+ CN+ +KF A L A EDLG Y+AT Sbjct: 77 LRFIESDFTREYWHEVFEPYVEAFESGATPNPDLECNRRVKFGALLRRAMEDLGGRYLAT 136 Query: 127 GHYVRRA---DVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQVRKIAE 183 GHY R D RLLRG+D KDQSYFL ++ E + + FP+G + K + R+ A Sbjct: 137 GHYARIDRDVDEGAPPRLLRGIDQTKDQSYFLASVRGEALRSACFPLGAVFKSETREAAR 196 Query: 184 DLGLVTAKKKDSTGICFIGERKFREFLGRYLPAQPGKIITVDGDE----IGEHQGLMYHT 239 LG A ++ S GICFIG R F EF+G Y+ G + + H+GL +T Sbjct: 197 ILGFDCADRRSSAGICFIGRRPFGEFIGEYITPSEGAFVDAETARPVPGAAPHRGLASYT 256 Query: 240 LGQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLHWVDREP 299 +GQR +G G +PW+VV K+V N++ VA+G EH L S W+ Sbjct: 257 VGQRAKIG------GAPKPWFVVGKNVAANVVYVAKGAEHDALYSTRAALADEFWISNRR 310 Query: 300 FT-----GTMRCTVKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTPGQSAVFYNGEVC 354 T ++R KTRY + V ++ + FD P AVTPGQ+ V Y+G+VC Sbjct: 311 PTSDDGSSSVRLLAKTRY-ASFSSSFVPRVESSPLRATFDRPERAVTPGQALVLYDGDVC 369 Query: 355 LGGGIIEQRL 364 LGGG+IE Sbjct: 370 LGGGVIEHVG 379 >UniRef50_C4F7E5 Putative uncharacterized protein n=2 Tax=Collinsella RepID=C4F7E5_9ACTN Length = 409 Score = 394 bits (1012), Expect = e-108, Method: Composition-based stats. Identities = 137/417 (32%), Positives = 197/417 (47%), Gaps = 66/417 (15%) Query: 4 TAKKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYCTAAADLADAQAVCD 63 T K+V+V MSGGVDSSV+A+LL QQGY G M D C + +D DA A+C Sbjct: 2 TRKRVLVAMSGGVDSSVTAYLLTQQGYDCLGATM-LLHGDAAPGACGSGSDADDAAAICA 60 Query: 64 KLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGADY 123 +LG ++ + +V E F+ Y+ GRTPNP I CN+ +KF A L +A E D+ Sbjct: 61 RLGFPHEVIDMRETFERHVVEKFVRTYETGRTPNPCIDCNRHLKFDALLSYAREH-DCDF 119 Query: 124 IATGHY---------------------------VRRADVDGKSRLLRGLDSNKDQSYFLY 156 IATGHY R + L LD +KDQSY LY Sbjct: 120 IATGHYGRIGTLAEGGGGSVRRGEEQEFVARITARTGASNAVHTLSCALDPSKDQSYVLY 179 Query: 157 TLSHEQIAQSLFPVGELEKP-QVRKIAEDLGLVTAKKKDSTGICFIGERKFREFLGRY-- 213 +L+ E++A++L P+G L K VR+IA + G A K+DS GICF+ + F ++ + Sbjct: 180 SLTQERLARTLLPLGGLFKERDVRRIAREQGFENAGKRDSQGICFVPDNDFATYIEKRNG 239 Query: 214 LPAQPGKIITVDGDEIGEHQGLMYHTLGQRKGLGIGGTKEGTEEPWYVVDKDVENNILVV 273 P G I+ G +G H G + +T+GQRKGLG+ P YV D N + + Sbjct: 240 APLPEGDIVNTSGHVLGRHHGAIRYTVGQRKGLGV-----ACAHPVYVTGIDAVANTVTL 294 Query: 274 AQGHEHPRLMSVGLIAQQLHW---------VDREPFTGTMRCTVKTRYRQTDIPCTVKAL 324 + + LM+ GL+A W + E + + K RYR P ++ Sbjct: 295 GEVAD---LMASGLVADDWIWSAPANVMEELLDEAGETGLPVSAKIRYRHPAQPARLRRA 351 Query: 325 DDDR-----------------IEVIFDEPVAAVTPGQSAVFYNGEVCLGGGIIEQRL 364 E+IFD P + PGQ+ V Y G++ LGGG + + + Sbjct: 352 TCGTTGSSAGANAIAENAANAFELIFDSPERGIAPGQAVVAYAGDIVLGGGTVVRAI 408 >UniRef50_C4QX90 tRNA-specific 2-thiouridylase, responsible for 2-thiolation of the wobble base of mitochondrial tRNA n=1 Tax=Pichia pastoris GS115 RepID=C4QX90_PICPG Length = 398 Score = 393 bits (1011), Expect = e-108, Method: Composition-based stats. Identities = 121/380 (31%), Positives = 193/380 (50%), Gaps = 27/380 (7%) Query: 5 AKKVIVGMSGGVDSSVSAWLLQQ--QGYQVEGLFMKNWEEDDGEEYCTAAADLADAQAVC 62 +++V MS GVDSSV+A L ++ +VEG+FM NW D +D D + C Sbjct: 23 KDRIVVAMSSGVDSSVTAALCRKIFPRSEVEGIFMANWTSDSN----CTDSDWNDVKKTC 78 Query: 63 DKLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGAD 122 +GI V+F EYW VFE L +Y+ G+TPNPD+ CN+ +KF +E LG Sbjct: 79 SHIGIPCRRVDFEKEYWTEVFEPMLEQYRIGKTPNPDVGCNRYVKFGKMIEHLTNTLGEQ 138 Query: 123 ---YIATGHYVRRADV--DGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQ 177 ++ TGHY R + + LLR KDQSY+L + + + P+G KP+ Sbjct: 139 QPWWLVTGHYARVLEDITSREKHLLRSDYLPKDQSYYLSRVKDSSLERMFLPIGHFSKPE 198 Query: 178 VRKIAEDLGLVTAKKKDSTGICFIG--ERKFREFLGRYLPAQPGKIITVDGD----EIGE 231 +R +A+ L T+ K DS G+CF+ E F++FL +LP +PG IIT+D + + G Sbjct: 199 IRNLAKKWKLPTSSKPDSQGLCFVSQKEGHFKKFLDEFLPPEPGDIITIDENGFKHKWGS 258 Query: 232 HQGLMYHTLGQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQ 291 HQGL + T+GQR G+ + + W+V +K + N +V+ +G +P L + Sbjct: 259 HQGLWHATIGQRSGVSMPQGDRNYKGAWFVSEKRPKTNEIVIVKGSNNPALYKDTVETSN 318 Query: 292 LHWVDR---EPFTGTMRCTVKTRYRQTDIPCTV-------KALDDDRIEVIFDEPVAAVT 341 W+ + + +YR P + +++++ R+ + A++ Sbjct: 319 WLWLGPFNADNLKNISINELIVQYRSLQDPIGLLNWKFFSQSINNQRMTFRLKQKYRAIS 378 Query: 342 PGQSAVFYNGEVCLGGGIIE 361 PGQ AV Y+ + LG G+I Sbjct: 379 PGQIAVLYHRDRVLGCGMIT 398 >UniRef50_D1PXB9 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase n=1 Tax=Prevotella bergensis DSM 17361 RepID=D1PXB9_9BACT Length = 384 Score = 393 bits (1010), Expect = e-108, Method: Composition-based stats. Identities = 135/385 (35%), Positives = 198/385 (51%), Gaps = 35/385 (9%) Query: 4 TAKKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYCTAAADLADAQAVCD 63 K++ V +SGGVDSSV + L G + +++ E+ E C + D+ A AV Sbjct: 7 KDKRIAVLLSGGVDSSVVVYELASHGLHPDCFYIRIGPEEKEEWDCNSEEDMEMATAVAK 66 Query: 64 KLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGADY 123 + G +L V+ EYW V + + ++G TPNPD++CN+ IKF AF E A D D Sbjct: 67 RFGCKLQVVDCHQEYWSQVTRYTMEKVRSGFTPNPDVMCNRLIKFGAFDEKAGHDY--DL 124 Query: 124 IATGHYVRRADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQVRKIAE 183 IATGHY + +DG+ L D KDQ+ FL + Q+ +++FP+G EK +VR+IAE Sbjct: 125 IATGHYAQTEWIDGRKWLTTSPDPVKDQTDFLAQIEGWQLKKAIFPIGHYEKNEVREIAE 184 Query: 184 DLGLVTAKKKDSTGICFIGERKFREFLGRYLPAQPGKIITVD-GDEIGEHQGLMYHTLGQ 242 L+ A++KDS GICF+G + E++ RYL QPG I+ ++ G +IGEH G +HT+GQ Sbjct: 185 REHLINARRKDSQGICFLGNIDYNEYVRRYLGEQPGDIVELETGTKIGEHSGHWFHTIGQ 244 Query: 243 RKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLHWVDREPFTG 302 RKGLG+ G PW+V+ KDVE+N+L V+ G++ LHW+ EP Sbjct: 245 RKGLGLSGG------PWFVIKKDVEHNVLYVSHGYDPETAYKKDFKIHDLHWLTEEPTPP 298 Query: 303 T--------------MRCTVKTRYRQTDIPCTV----------KALDDDRIEVIFDEPVA 338 + T K R+ P + L D + + + Sbjct: 299 HHLSEASESQKPGSYIPITFKIRHTPEYHPGYLDLNAASSSDHTELTGDTATIHSLDKIH 358 Query: 339 AVTPGQSAVFYNGE--VCLGGGIIE 361 V PGQ V Y+ + C G G I Sbjct: 359 GVAPGQFCVIYDEQHHRCFGSGEIT 383 >UniRef50_Q6AIZ6 tRNA-specific 2-thiouridylase mnmA n=1 Tax=Desulfotalea psychrophila RepID=MNMA_DESPS Length = 344 Score = 392 bits (1008), Expect = e-107, Method: Composition-based stats. Identities = 124/353 (35%), Positives = 185/353 (52%), Gaps = 19/353 (5%) Query: 10 VGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYCTAAADLADAQAVCDKLGIEL 69 + MSGGVDS+ +A L +Q+G V G FMK + D + + KL I+L Sbjct: 8 IAMSGGVDSTATAILQKQKG-PVLGFFMKLNQPDYETQR-------DRVSQIAQKLDIKL 59 Query: 70 HTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGADYIATGHY 129 ++ E+ + V + F A Y G TPNP I+CNKEIKF + A G + IATGHY Sbjct: 60 EIIDLTEEFQEYVLKYFSASYFKGLTPNPCIICNKEIKFG-LFQQAILRQGVERIATGHY 118 Query: 130 VRRADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQVRKIAEDLGLVT 189 + +L +G+D +KDQSYFL LS EQ+A S+FP+G + K + + E G Sbjct: 119 AQIHKTAAGYQLHKGVDPHKDQSYFLSRLSQEQLAHSIFPLGGMHKGAIYDLVEAHGFHD 178 Query: 190 AKKKDSTGICFIGERKFREFLGR--YLPAQPGKIITVDGDEIGEHQGLMYHTLGQRKGLG 247 + +S +CF+ + +FL + A G I+ DG +G+H+GL +T+GQR+GLG Sbjct: 179 FRGTESQDVCFLEQDNVVDFLEQTAEFSASSGNIVMNDGKILGKHKGLHRYTVGQRRGLG 238 Query: 248 IGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLHWVDREPFTGTMRCT 307 I P YV++ DV+NN ++V E+ +L + +HW+ + + + Sbjct: 239 IS-----YPVPLYVINLDVKNNNVIVG---ENEQLFHKTMAISDIHWISQPEREDLLHAS 290 Query: 308 VKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTPGQSAVFYNGEVCLGGGII 360 V R +V +++R VIFDEP A+TPGQ A Y LG G+I Sbjct: 291 VHIRSTHKGAQASVILKENNRASVIFDEPQRAITPGQFATIYKDTQVLGSGVI 343 >UniRef50_A6Q239 tRNA-specific 2-thiouridylase mnmA n=2 Tax=Epsilonproteobacteria RepID=MNMA_NITSB Length = 339 Score = 392 bits (1008), Expect = e-107, Method: Composition-based stats. Identities = 131/360 (36%), Positives = 205/360 (56%), Gaps = 27/360 (7%) Query: 5 AKKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYCTAAADLADAQAVCDK 64 +KK++V MSGGVDSS +A LLQ +GY+V G++MK ++ + ++A+ Q V Sbjct: 2 SKKIVVAMSGGVDSSYTANLLQSRGYEVIGVYMKFHPREEYHQ-----KNIANIQKVAKH 56 Query: 65 LGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGADYI 124 LGIE H ++ E+ + V++ F+ Y AG TPNP +CN+ +KF +EFA ++LG D + Sbjct: 57 LGIEYHVLDRTKEFQERVYQPFVDSYVAGLTPNPCAMCNRVMKFTELIEFA-DELGVDNV 115 Query: 125 ATGHYVRRADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQVRKIAED 184 ATGHY + + D +KDQSYFL+ L E + + +FP+G+ K V+K A Sbjct: 116 ATGHYAK----TDGQFIYEATDKSKDQSYFLFNLKKEFLPRIIFPLGDWYKENVKKEAMK 171 Query: 185 LGL--VTAKKKDSTGICFIGERKFREFLGRYLPAQ-PGKIITVDGDEIGEHQGLMYHTLG 241 + L A++K+S+ ICF+ E + + L + + PG+++ G IGEH+G M++T+G Sbjct: 172 ILLLKSIAEQKESSEICFV-ETNYIDVLKEHTEVEMPGEVVDTHGKVIGEHKGYMHYTIG 230 Query: 242 QRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLH-WVDREPF 300 +RKG + +P YV+D N +VV + L ++ + L+ ++D++ F Sbjct: 231 KRKGFRLF----KAHQPHYVLDIIPHKNRIVVGTKEQ---LEKRQIVLRGLNMFLDQKEF 283 Query: 301 TGTMRCTVKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTPGQSAVFYNGEVCLGGGII 360 C +K RYR +PC VK +D V EPV V GQ+ VFY+ E LGGG I Sbjct: 284 ----DCYIKIRYRTHKVPCHVK-IDGSVASVTLKEPVYGVAKGQAGVFYDEEKVLGGGWI 338 >UniRef50_C9RQ01 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase n=1 Tax=Fibrobacter succinogenes subsp. succinogenes S85 RepID=C9RQ01_FIBSS Length = 366 Score = 392 bits (1007), Expect = e-107, Method: Composition-based stats. Identities = 138/376 (36%), Positives = 198/376 (52%), Gaps = 28/376 (7%) Query: 1 MSETAKKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEED------DGEEYCTAA-- 52 MS+ K+V VG+SGGVDS++SA+LL++QGY+V G+ M W++ +G E C Sbjct: 1 MSQK-KRVAVGLSGGVDSALSAYLLKKQGYEVVGMTMATWDDSVKMPAVEGREGCYGPSE 59 Query: 53 -ADLADAQAVCDKLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAF 111 ++ +A+ V ++LGI + V A +Y V + F AEY+AGRTPNP + CN+ IKF A Sbjct: 60 DKNIEEAKLVAERLGIPHYVVPVAEDYKREVLDYFRAEYRAGRTPNPCVRCNQSIKFGAL 119 Query: 112 LEFAAEDLG--ADYIATGHYVRRA-DVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLF 168 + AA LG DY ATGHY R L LD +KDQ+YFL LS EQ++ +F Sbjct: 120 -QHAARKLGIDFDYFATGHYARLDFKNPDVPFLYEALDEHKDQTYFLSRLSAEQLSTVIF 178 Query: 169 PVGELEKPQVRKIAEDLGLVT-AKKKDSTGICFIGERKFREFLGRYLPAQPGKIITVDGD 227 P+G ++K V+ +A+++G A K++S FI + L PG I V+G Sbjct: 179 PLGGMQKADVKALAKEIGWDDFATKRESQD--FIECGDY-SVLFDESDNVPGDFIDVNGK 235 Query: 228 EIGEHQGLMYHTLGQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGL 287 +G+H+G++++T+GQRKGL IG G EP YVV D +N +++ L + Sbjct: 236 VLGKHKGIVHYTIGQRKGLNIG----GQAEPLYVVAIDAHHNQVILGPRS---ALSCTEV 288 Query: 288 IAQQLHW-VDREPFTGTMRCTVKTRYRQTDIPCTVKALD--DDRIEVIFDEPVAAVTPGQ 344 A L+ V T R + ALD I V FDEP A PGQ Sbjct: 289 SAVDLNLMVSETSPLLKEPLTAHIRLGHKGATARITALDTAAGTISVKFDEPQFASAPGQ 348 Query: 345 SAVFYNGEVCLGGGII 360 V Y + + II Sbjct: 349 VLVLYADKGVVASAII 364 >UniRef50_B9L801 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase n=1 Tax=Nautilia profundicola AmH RepID=B9L801_NAUPA Length = 341 Score = 391 bits (1006), Expect = e-107, Method: Composition-based stats. Identities = 132/360 (36%), Positives = 202/360 (56%), Gaps = 26/360 (7%) Query: 5 AKKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYCTAAADLADAQAVCDK 64 AK+V+VG+SGGVDS++S +LL++QGY V G++MK E + E ++A + K Sbjct: 2 AKRVLVGVSGGVDSAMSVYLLKEQGYDVVGIYMKMHEGVNHVE------NVAKLNRLSKK 55 Query: 65 LGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGADYI 124 LG E + E+ V+E F+ YK G TPNP +CN +IKF F+ F E G + Sbjct: 56 LGFEYVIEDVEDEFRKEVYEYFVESYKQGITPNPCAMCNIKIKFGIFMGFL-EKYGCELA 114 Query: 125 ATGHYVRRADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQVRKIAED 184 ATGHYVR + L + D +KDQSYFL+ + + + + LFP+GE K +++K+A + Sbjct: 115 ATGHYVR----NDGEFLYQAKDQSKDQSYFLFGIKKKVLPKILFPLGEYTKDEIKKLASE 170 Query: 185 LGLVT-AKKKDSTGICFIGERKFREFLGRYL-PAQPGKIITVDGDEIGEHQGLMYHTLGQ 242 +GL A +K+S ICFI + + + L + P + GK++ G +IG H+G ++T+GQ Sbjct: 171 IGLDEFASQKESQDICFI-DNSYIDVLKLHFNPERKGKVVNKRGQKIGVHKGYSFYTVGQ 229 Query: 243 RKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLH-WVDREPFT 301 RKG + + +P YV+ D ++N L+V + L + + ++ ++D + F Sbjct: 230 RKGFNLF----KSHKPQYVIGIDAKSNTLIVGDKKD---LEKKQVFLKGVNLFIDDKVF- 281 Query: 302 GTMRCTVKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTPGQSAVFYNGEVCLGGGIIE 361 C K RYR +P VK + V F EPV+ V GQ+ VFY GE LGGG I Sbjct: 282 ---ECEAKIRYRAPKVPAVVKMESKSKAVVNFHEPVSGVAKGQACVFYEGEKLLGGGWIR 338 >UniRef50_Q12093 Mitochondrial tRNA-specific 2-thiouridylase 1 n=10 Tax=Saccharomycetaceae RepID=MTU1_YEAST Length = 417 Score = 389 bits (1001), Expect = e-107, Method: Composition-based stats. Identities = 134/389 (34%), Positives = 188/389 (48%), Gaps = 26/389 (6%) Query: 1 MSETAKKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEE----DDGEEYCTAAADLA 56 + VIV MS GVDSSV+A L + G++M+NW E DD + D Sbjct: 22 LPAKFDNVIVAMSSGVDSSVAAALFAGEFPNTRGVYMQNWSESQSLDDPGKEPCYERDWR 81 Query: 57 DAQAVCDKLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAA 116 D V L I + VNF +YW +VFE L Y G TPNPDI CNK +KF E+ Sbjct: 82 DVNRVAKHLNIRVDKVNFEQDYWIDVFEPMLRGYSEGSTPNPDIGCNKFVKFGKLREWLD 141 Query: 117 EDLG--ADYIATGHYVRRADV---DGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVG 171 E G ++ TGHY R G LLR + KDQSY+L ++ ++ L P+G Sbjct: 142 EKYGTGNYWLVTGHYARVMQEMNGKGLFHLLRSIYRPKDQSYYLSQINSTVLSSLLLPIG 201 Query: 172 ELEKPQVRKIAEDLGLVTAKKKDSTGICFIG---ERKFREFLGRYLPAQPGKIITVD--- 225 L KP+VR +A+ GL TA+K DS GICF+ KF+ FL YLP+ PG IITVD Sbjct: 202 HLTKPEVRDLAKYAGLPTAEKPDSQGICFVNNSQHGKFKNFLKHYLPSSPGDIITVDPQS 261 Query: 226 --GDEIGEHQGLMYHTLGQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLM 283 G H GL +T+GQ+ G+ + + W+V +K + N +++ +G ++P L Sbjct: 262 GAKTTWGRHDGLWSYTIGQKVGISMPQADPNYQGTWFVSEKLRDTNEILIVRGRDNPALY 321 Query: 284 SVGLIAQQLHWVDREP-----FTGTMRCTVKTRYRQTDI---PCTVKALDDD-RIEVIFD 334 S + + + F T T++ R Q + C + D+ I + Sbjct: 322 SDTMRIENFSSLGPREDTINAFQNTGALTLQFRSLQVPVQIKSCKLNRSADNLDITIHLA 381 Query: 335 EPVAAVTPGQSAVFYNGEVCLGGGIIEQR 363 A+TPGQS Y + LG G I Sbjct: 382 SKQRAITPGQSCCLYIDDRVLGSGPISHV 410 >UniRef50_C3J919 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase n=15 Tax=Bacteria RepID=C3J919_9PORP Length = 383 Score = 385 bits (990), Expect = e-105, Method: Composition-based stats. Identities = 132/368 (35%), Positives = 205/368 (55%), Gaps = 24/368 (6%) Query: 8 VIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKN-WEEDDGEEYCTAAADLADAQAVCDKLG 66 + V SGGVDSSV+ LL Q G++ + +++ E+++G C A D+ + K Sbjct: 21 IAVLASGGVDSSVAVHLLLQAGFRPDLFYIRIGMEDEEGFIDCPAEEDMEMVTLLARKYQ 80 Query: 67 IELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGADYIAT 126 + ++ EYW+ V + + + G TPNPD++CNK IKF F E DYIAT Sbjct: 81 LHYEVIDLHKEYWERVVKYTIESVRQGLTPNPDMMCNKLIKFGVFEERVGHRY--DYIAT 138 Query: 127 GHYVRRADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQVRKIAEDLG 186 GHY A VDGK+ L D KDQ+ FL ++ +QI++ LFP+G L K QVR +AE+ G Sbjct: 139 GHYASTARVDGKTFLATAPDPVKDQTDFLAQINFKQISKLLFPLGCLTKQQVRMVAEEAG 198 Query: 187 LVTAKKKDSTGICFIGERKFREFLGRYLPAQPGKIITVD-GDEIGEHQGLMYHTLGQRKG 245 L A +KDS GICF+G+ + +F+ RYL +PG+II + G +G HQG +HT+GQRKG Sbjct: 199 LANAHRKDSQGICFLGKINYNDFIERYLGKRPGRIIEYETGKTLGTHQGFWFHTIGQRKG 258 Query: 246 LGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLHWVDREPFTGT-- 303 LG+ G PW+VV KD + NI++V++G++ + + ++ + F Sbjct: 259 LGLSGG------PWFVVKKDCKRNIILVSRGYDPLTQYGTEIFVDKFDFITEDLFAPEGA 312 Query: 304 ---------MRCTVKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTPGQSAVFYNGE-- 352 + T+K R+ + T++ L+ ++ + P+ + PGQ AV Y+ E Sbjct: 313 VGNKEGAQVVPITLKIRHTPEFVRATIRRLERGY-HIVSETPIQGIAPGQYAVIYDPESR 371 Query: 353 VCLGGGII 360 +C G G+I Sbjct: 372 LCFGSGMI 379 >UniRef50_C7NES3 tRNA(5-methylaminomethyl-2-thiouridylate)-methyl transferase n=5 Tax=Fusobacteriaceae RepID=C7NES3_LEPBD Length = 364 Score = 384 bits (986), Expect = e-105, Method: Composition-based stats. Identities = 129/376 (34%), Positives = 207/376 (55%), Gaps = 25/376 (6%) Query: 1 MSET--AKKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGE---EYCTAAADL 55 M++ KKV+VGMSGG+DSSV+A LL+QQGY+V G+ +K+ ++ E + C + D+ Sbjct: 1 MNKKLDDKKVVVGMSGGIDSSVAALLLKQQGYEVIGVTLKHLPDELSENPGKTCCSLDDI 60 Query: 56 ADAQAVCDKLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFA 115 DA+ C LGI + +N E+ +V E F+ Y AG+TP+P ++C++++K K +EFA Sbjct: 61 NDARYTCYNLGIPHYVLNVVEEFKKDVMEYFIKMYNAGKTPSPCVICDEKVKIKKLVEFA 120 Query: 116 AEDLGADYIATGHYVRRADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEK 175 + +G YI+TGHY + ++ + LL ++ KDQ+Y LY L + + + LFP+ E EK Sbjct: 121 -DKMGIKYISTGHYSKVSENN---MLLWDKNNRKDQTYMLYRLDKDIVERFLFPLAEYEK 176 Query: 176 PQVRKIAEDLGLVTAKKKDSTGICFIGERKFREFLGRYL--PAQPGKIITVDGDEIGEHQ 233 +VR+IA G+ T K DS GICF + FL + L + G + +G IGEH Sbjct: 177 SEVREIARQNGIHTHNKPDSQGICFAPNG-YIPFLKKVLGNDVKKGNFVDKNGKIIGEHI 235 Query: 234 GLMYHTLGQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLH 293 G ++T+GQR+GLG+ K P++V++ E N +VV + L+ + Sbjct: 236 GYQFYTIGQRRGLGLNLGK-----PFFVLELRPETNEVVVG---DFEELLIKEIEVINYK 287 Query: 294 WVDREPFTGTMRCTVKTRYRQTDIPCTVKAL-----DDDRIEVIFDEPVAAVTPGQSAVF 348 + + T + R+ + +K L +++RI FDE + GQ VF Sbjct: 288 FHYSLENIIGKKLTARPRFSSKGLTGELKILKNEESNENRIIFEFDEKTHENSEGQHIVF 347 Query: 349 YNGEVCLGGGIIEQRL 364 Y + +GGG I+ L Sbjct: 348 YLNDEIVGGGEIKLLL 363 >UniRef50_D1XXK1 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase n=1 Tax=Prevotella bivia JCVIHMP010 RepID=D1XXK1_9BACT Length = 386 Score = 384 bits (986), Expect = e-105, Method: Composition-based stats. Identities = 138/387 (35%), Positives = 199/387 (51%), Gaps = 37/387 (9%) Query: 4 TAKKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYCTAAADLADAQAVCD 63 KK+ V +SGGVDSSV W + G + ++K E+ C++ DL A AVC Sbjct: 7 KDKKIAVLLSGGVDSSVVVWEFARLGLHPDCYYIKIGPEEAEAWDCSSEEDLEMATAVCR 66 Query: 64 KLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGADY 123 + +L ++ EYW V + + + KAG TPNPD++CN+ IKF AF E + D Sbjct: 67 RFECKLEVIDCHKEYWGQVTKYTMDKVKAGFTPNPDVMCNRLIKFGAFYEKKGYEY--DL 124 Query: 124 IATGHYVRRADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQVRKIAE 183 IATGHY + +DGK L D KDQ+ FL + Q+ +++FP+G EK +VR+IAE Sbjct: 125 IATGHYAQTKWIDGKKWLCTSPDPVKDQTDFLAQIYDWQLQKAIFPIGHYEKNEVREIAE 184 Query: 184 DLGLVTAKKKDSTGICFIGERKFREFLGRYLPAQPGKIITVD-GDEIGEHQGLMYHTLGQ 242 L+ AK+KDS GICF+G + E++ RYL G+II ++ G +IGEH+GL +HT+GQ Sbjct: 185 REHLINAKRKDSQGICFLGNIDYNEYVRRYLGENAGEIIELETGKKIGEHKGLWFHTIGQ 244 Query: 243 RKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLHWVDREPFTG 302 RKGLG+GG PW+V+ KDVE NIL V+ G++ LHW+ P Sbjct: 245 RKGLGLGGG------PWFVIKKDVEKNILYVSHGYDPETAYKRKFKVCDLHWLTVSPSEL 298 Query: 303 T-------------------MRCTVKTRYRQTDIPCTVKALDDD-------RIEVIFDEP 336 + T K R+ ++ L ++ + + Sbjct: 299 EDSNGIILQNGCCSSFKHTLIPITFKIRHTPEYHQGYLEVLSEEGHLVEGSEALIHAQKK 358 Query: 337 VAAVTPGQSAVFYNG--EVCLGGGIIE 361 + V PGQ V Y+ E C G G I Sbjct: 359 IHGVAPGQFCVIYDEEHERCFGSGEIT 385 >UniRef50_B2RHP0 tRNA-specific 2-thiouridylase mnmA n=5 Tax=Bacteroidales RepID=MNMA_PORG3 Length = 361 Score = 383 bits (985), Expect = e-105, Method: Composition-based stats. Identities = 123/366 (33%), Positives = 193/366 (52%), Gaps = 20/366 (5%) Query: 8 VIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKN-WEEDDGEEYCTAAADLADAQAVCDKLG 66 V +SGGVDSSV L ++GY+ +++ E++DG C A D+ + + G Sbjct: 3 VAALVSGGVDSSVVVHRLCEEGYKPAIFYIRIGMEDEDGYIDCPAEEDIELTTLIARRYG 62 Query: 67 IELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGADYIAT 126 V+ EYW+ V + + G TPNPD++CNK IKF F E D IAT Sbjct: 63 CPFEVVDLHKEYWERVVSYTVETVRRGLTPNPDMMCNKLIKFGCFEERWGYQF--DRIAT 120 Query: 127 GHYVRRADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQVRKIAEDLG 186 GHY ++GK+ L D KDQ+ FL ++ QI++ +FP+G L K +VR IA G Sbjct: 121 GHYATTDLLNGKTYLSTAKDPVKDQTDFLAQINFAQISKLMFPIGHLLKSEVRAIANAAG 180 Query: 187 LVTAKKKDSTGICFIGERKFREFLGRYLPAQPGKIITVD-GDEIGEHQGLMYHTLGQRKG 245 L +AK+KDS GICF+G+ + +F+ RYL + G+II ++ G IG HQG +HT+GQRKG Sbjct: 181 LPSAKRKDSQGICFLGKIDYNDFIERYLGKKEGRIIELETGKVIGRHQGYWFHTIGQRKG 240 Query: 246 LGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLHWVDREPFTGTM- 304 LG+ G PW+VV KD++ NI++V++G++ + + ++ + + Sbjct: 241 LGLSGG------PWFVVKKDIKRNIILVSRGYDPDTQYGKTIEMETFDFITEDAYEAGYW 294 Query: 305 ------RCTVKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTPGQSAVFYNGE--VCLG 356 T K R+ + + + +E + + PGQ V Y+ + +C G Sbjct: 295 NREDATPVTFKIRHTPEFTRGLLYKGEKGY-RLESEERIQGIAPGQYCVIYDEDHHLCYG 353 Query: 357 GGIIEQ 362 G+I + Sbjct: 354 SGMITK 359 >UniRef50_B7AL92 Putative uncharacterized protein n=3 Tax=Bacteroides RepID=B7AL92_9BACE Length = 357 Score = 382 bits (983), Expect = e-105, Method: Composition-based stats. Identities = 120/356 (33%), Positives = 189/356 (53%), Gaps = 21/356 (5%) Query: 2 SETAKKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYCTAAADLADAQAV 61 ++ ++V++GMSGG DSSV+A L GY+V G+ + +E D EY L DA+A+ Sbjct: 8 MKSKERVLLGMSGGTDSSVAAMRLLDAGYEVTGVTFRFYEVDGRTEY------LDDARAL 61 Query: 62 CDKLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGA 121 +LGIE T + + + + F+ EY AG TP P LCN E+K+ A L A++ G Sbjct: 62 AARLGIEHVTYDAQELFRERIIRYFIDEYLAGHTPVPCTLCNNELKW-ALLARIADEKGI 120 Query: 122 DYIATGHYVRRADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQVRKI 181 +I+TGHY R+A + + + D +KDQ++FL+ L + + + L P+G++ K + R Sbjct: 121 YWISTGHYARKALLGEQCYIAPASDRDKDQTFFLWGLKQDILQRMLLPMGDVTKEEARAY 180 Query: 182 AEDLGLV-TAKKKDSTGICFIGERKFREFLGRYLPAQ----PGKIITVDGDEIGEHQGLM 236 A G A KKDS G+CF +R FL R +PA+ G I G+ +G H+G Sbjct: 181 AAGRGFARVASKKDSIGVCFCP-LDYRSFLKREVPAERLPGKGLFIGEKGEILGRHEGYP 239 Query: 237 YHTLGQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLHWVD 296 ++T+GQR+GLGI + +V + N +V+A L ++ + + V Sbjct: 240 FYTIGQRRGLGIHLNRA-----VFVKEVRTATNEVVLAP---LASLYKDEMLLKDWNLVS 291 Query: 297 REPFTGTMRCTVKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTPGQSAVFYNGE 352 + G VK RYR+ C V + D + V EP+ A+ PGQ+A FY+ + Sbjct: 292 EQRVLGMETVIVKIRYRKQANRCRVALMADGCLRVSLLEPLEAIAPGQAAAFYDAD 347 >UniRef50_A8F5H8 tRNA-specific 2-thiouridylase mnmA n=3 Tax=Thermotogaceae RepID=MNMA_THELT Length = 349 Score = 382 bits (981), Expect = e-104, Method: Composition-based stats. Identities = 122/365 (33%), Positives = 192/365 (52%), Gaps = 24/365 (6%) Query: 7 KVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEED------DGEEYCTAAADLADAQA 60 K+ + +SGGVDS+V+ + L+ +GY++ MK +++ + C + +D DA+ Sbjct: 2 KIGILLSGGVDSAVALYQLKNEGYEIVAYHMKTMKDEFFLNRQVKHKICCSPSDTVDAKL 61 Query: 61 VCDKLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLG 120 + G+ L VN + + + +L EY GRTPNP CN+ IKF ++ ED G Sbjct: 62 IAKTAGVPLKVVNLHEIFKEKIITYYLQEYTRGRTPNPCYFCNRFIKFGYLMDLMIED-G 120 Query: 121 ADYIATGHYVRRADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQVRK 180 D I++GHY R D +LL+ LD KDQSYFL ++ E++ + +FP G+ K ++R Sbjct: 121 VDVISSGHYARVVD----GKLLKALDKEKDQSYFLASIEKERLKKIVFPNGDKTKDEIRD 176 Query: 181 IAEDLGLVTAKKKDSTGICFIGERKFREFLGRY-LPAQPGKIITVDGDEIGEHQGLMYHT 239 IA+ G+ K +S +CFI + + F + + G I G +IGEH GL+ +T Sbjct: 177 IAKKAGIHVHSKAESQDLCFIPDGDQKRFFEEQGIKIKSGPIFDKYGKKIGEHTGLINYT 236 Query: 240 LGQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLHWVDREP 299 +GQRK +G+ E YV + N L+V + + S + + Sbjct: 237 IGQRK-IGVSAG-----ERVYVTRICADRNALIVGNEKD---VQSDKFSVIDFNLLVD-- 285 Query: 300 FTGTMRCTVKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTPGQSAVFYNGEVCLGGGI 359 TVK R T++PC V +L++ R+ V PV AV PGQ+AVFY G++ +G GI Sbjct: 286 IDKNFEATVKVRKNSTEVPCKV-SLENHRVIVKTTMPVFAVAPGQAAVFYRGDIVIGAGI 344 Query: 360 IEQRL 364 IE+ L Sbjct: 345 IEKIL 349 >UniRef50_C9L0F1 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase n=1 Tax=Bacteroides finegoldii DSM 17565 RepID=C9L0F1_9BACE Length = 365 Score = 381 bits (978), Expect = e-104, Method: Composition-based stats. Identities = 126/377 (33%), Positives = 199/377 (52%), Gaps = 33/377 (8%) Query: 1 MSETAKKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYCTAAADLADAQA 60 M E ++V++GMSGG DSSV+A L + GY+V G+ + +E +D EY L DA++ Sbjct: 1 MIEENRRVLLGMSGGTDSSVAAMRLLEGGYEVTGITFRFYELNDSTEY------LEDARS 54 Query: 61 VCDKLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLG 120 + ++LGI T + + + E F+ EY GRTP P LCN +K+ L A+++G Sbjct: 55 LAERLGIRHITYDARDVFRKQIIEYFVQEYMEGRTPVPCTLCNNCLKWP-LLAKVADEMG 113 Query: 121 ADYIATGHYVRRADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQVRK 180 YIATGHYV++ +++G + D +KDQS+FL+ L + + + L P+G + K + R Sbjct: 114 IFYIATGHYVQKVELEGTYYITHAADPDKDQSFFLWGLKQDILRRILLPMGNITKVEARV 173 Query: 181 IAEDLGL-VTAKKKDSTGICFIGERKFREFLGRYLP----------------AQPGKIIT 223 A + G A KKDS G+CF +R FL +L + G+ + Sbjct: 174 WAAERGFQKVATKKDSIGVCFCP-MDYRSFLKEWLARNGQLRSENVSCWSEMVRRGRFVD 232 Query: 224 VDGDEIGEHQGLMYHTLGQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLM 283 G+ IG H+G ++T+GQR+GLGI + P +V + E N +V++ L Sbjct: 233 EKGNFIGWHEGYPFYTIGQRRGLGIHLNR-----PVFVKEIYPEKNEVVLSS---LSALE 284 Query: 284 SVGLIAQQLHWVDREPFTGTMRCTVKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTPG 343 + + + V+ + G VK RYR+ + CTV D+ + + EP+ A+ G Sbjct: 285 KTEMQLKDWNLVNPQKILGYNDVIVKIRYRKQENHCTVTVTPDNLLHIQLHEPLTAIAAG 344 Query: 344 QSAVFYNGEVCLGGGII 360 Q+A FY + LGGGII Sbjct: 345 QAAAFYRDGLLLGGGII 361 >UniRef50_B0VEY5 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase n=1 Tax=Candidatus Cloacamonas acidaminovorans RepID=B0VEY5_9BACT Length = 382 Score = 379 bits (974), Expect = e-104, Method: Composition-based stats. Identities = 125/356 (35%), Positives = 193/356 (54%), Gaps = 24/356 (6%) Query: 2 SETAKKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDG-----EEYC---TAAA 53 + V VG+SGG+DS+++A+LLQ+ GY+V G+ M+ ++E+ + C Sbjct: 1 MQKKTSVAVGISGGIDSAMTAYLLQESGYRVIGITMQTYDENIEMDKTLKSGCFGPAQEE 60 Query: 54 DLADAQAVCDKLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLE 113 ++ A + KLGIE + + E+ V + F Y G+TPNP ++CN IKF A L Sbjct: 61 NILSASLLWRKLGIEHYIIPLQEEFRHKVIDYFCETYIKGKTPNPCLVCNAYIKF-ALLP 119 Query: 114 FAAEDLG--ADYIATGHYVRRADVD--GKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFP 169 A LG DY ATGHY + + + ++ + D+NKDQSYFL LS EQ+AQ+LFP Sbjct: 120 EKAHSLGLEFDYFATGHYAKIGFNNTLKRYQIRKAKDANKDQSYFLAFLSQEQLAQTLFP 179 Query: 170 VGELEKPQVRKIAEDLGLVTA-KKKDSTGICFIGERKFREFLGRYLPAQPGKIITVDGDE 228 +G+ K +++K+A G ++K+S F+ E L + PG+II + G Sbjct: 180 LGDYTKQEIKKMAIGKGFTELVERKESQD--FLQSSDL-EVLFKPEDFNPGEIIDMQGKV 236 Query: 229 IGEHQGLMYHTLGQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLI 288 IG+H+G++ +T+GQR+ LGI G EP+YV+ D ENN +V+ L Sbjct: 237 IGKHKGIINYTIGQRRNLGIS----GMPEPYYVLQIDAENNRIVLGPKE---YLFKKKCS 289 Query: 289 AQQLHWVDREPFTGTMRCTVKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTPGQ 344 A ++WV R K R + + C V ++D+ IEV+F EP ++TPGQ Sbjct: 290 ATDMNWVSLPAPEKKFRAKAKIRQQHSPADCIVTPINDNTIEVVFKEPQLSITPGQ 345 >UniRef50_C5DEF9 KLTH0C08844p n=2 Tax=Saccharomycetaceae RepID=C5DEF9_LACTC Length = 426 Score = 378 bits (971), Expect = e-103, Method: Composition-based stats. Identities = 125/390 (32%), Positives = 185/390 (47%), Gaps = 32/390 (8%) Query: 1 MSETAKKVIVGMSGGVDSSVSAWLLQQQGY-QVEGLFMKNWEEDDGEEYCTAAADLADAQ 59 + +++ MS GVDSSV+A + G+ G++M+NW E E D D Q Sbjct: 29 LPSKFDNIVIAMSSGVDSSVAAAMF--SGFPNACGIYMQNWTETRSEREPCHERDWKDVQ 86 Query: 60 AVCDKLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDL 119 V L + + VNF +YW +VFE L +Y+ G TPNPDI CN+ IKF L Sbjct: 87 KVGAHLNLPVEKVNFEQDYWLDVFEPMLRDYEQGVTPNPDIGCNRFIKFGKLRAHLDASL 146 Query: 120 --GADYIATGHYVRRADVDGK------SRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVG 171 G ++ TGHY R + K LLR + KDQSY+L + + P+G Sbjct: 147 GTGNYWLVTGHYSRVLQTESKALGLNSWHLLRAFYAPKDQSYYLSQVPSAALPALCLPMG 206 Query: 172 ELEKPQVRKIAEDLGLVTAKKKDSTGICFIG---ERKFREFLGRYLPAQPGKIITVDG-- 226 L KP+VR++A DL L TA K DS GICF+ K FL +Y+P+ G+IIT+D Sbjct: 207 VLTKPEVREMAHDLRLPTAHKPDSQGICFVANSQHGKISRFLEQYIPSHAGEIITLDPIT 266 Query: 227 ---DEIGEHQGLMYHTLGQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLM 283 E G H GL +T+GQ+ G+ + + W+V DK V+ N +V+ +G ++P L Sbjct: 267 GERTEWGRHTGLWNYTIGQKVGISMPQGDPRYQGAWFVADKRVDTNEIVICKGRDNPSLY 326 Query: 284 SVGLIAQQL------HWVDREPFTGTMRCTVKTRYRQTDIPCTV-------KALDDDRIE 330 ++ + + V + +YR P V + R+ Sbjct: 327 KNRVVLKDFSPLGNLNDVQEAVKNNLAGGAIHIQYRSLQEPAKVSRCCWETTEAGESRLV 386 Query: 331 VIFDEPVAAVTPGQSAVFYNGEVCLGGGII 360 + ++ A+ PGQ Y+ E LG G I Sbjct: 387 MTLEQKQRAMAPGQYCTIYHKERILGSGTI 416 >UniRef50_A5FZD5 tRNA-specific 2-thiouridylase mnmA n=2 Tax=Proteobacteria RepID=MNMA_ACICJ Length = 345 Score = 376 bits (967), Expect = e-103, Method: Composition-based stats. Identities = 126/360 (35%), Positives = 183/360 (50%), Gaps = 23/360 (6%) Query: 7 KVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEY---CTAAADLADAQAVCD 63 +V+V MSGGVDSSV A L+ + G++V G+ ++ ++ C A D+ DA+ V D Sbjct: 2 RVVVAMSGGVDSSVVAGLMHEAGHEVIGVTLQLYDHGAATGRKGACCAGQDIHDARNVAD 61 Query: 64 KLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGADY 123 +LGI + ++ A + V F Y GRTP P + CN+ +KF L A DLGA+ Sbjct: 62 RLGIAHYVIDAEAAFRAAVIGDFAESYAEGRTPVPCVRCNQHLKFGDLL-GLARDLGAEA 120 Query: 124 IATGHYVRRADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELE-KPQVRKIA 182 +ATGHYVRR D + L R +D+ +DQS+FL+ + +Q+A S FP+G + K VR A Sbjct: 121 LATGHYVRREDGPEGAELHRAVDARRDQSWFLFATTRDQLAFSRFPLGTMPDKDAVRAEA 180 Query: 183 EDLGLVTAKKKDSTGICFIGERKFREFLGRYLP--AQPGKIITVDGDEIGEHQGLMYHTL 240 + L A+K DS ICF+ + + + + P A PG+I+T DG + HQG+ +T+ Sbjct: 181 ARMNLPVAEKPDSQDICFVPSGTYADIVAKLRPDAAAPGEIVTEDGAVLDRHQGIARYTV 240 Query: 241 GQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLHWVDREPF 300 GQ K LG V D +VV R + + +W+ +P Sbjct: 241 GQAKRLGAASGHV-------VTRIDAARRRIVVGPRGAGGR----EVRIAEPNWL-IDPP 288 Query: 301 TGTMRCTVKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTPGQSAVFYNGEVCLGGGII 360 R +VK R +T P + D R V D P A PGQ+ V Y LGGG I Sbjct: 289 AAPFRASVKLRAGETPHPAEI---DIARNLVTLDTPALA-APGQACVVYRESRVLGGGFI 344 >UniRef50_D1BVV4 tRNA(5-methylaminomethyl-2-thiouridylate)-methyl transferase n=2 Tax=Actinomycetales RepID=D1BVV4_XYLCX Length = 400 Score = 375 bits (963), Expect = e-102, Method: Composition-based stats. Identities = 129/386 (33%), Positives = 185/386 (47%), Gaps = 34/386 (8%) Query: 7 KVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDD----GEEYCTAAADLADAQAVC 62 +V+ MSGGVDS+V+A L + G+ V G+ M D G C + D +DA+ Sbjct: 2 RVLAAMSGGVDSAVAAALAVEAGHDVVGVHMALSRNRDQFRTGSRGCCSIEDASDARRAA 61 Query: 63 DKLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGAD 122 D LGI + + + + D V FLAEY+AGRTPNP + CN+ IKF+ LE A LG D Sbjct: 62 DVLGIPYYVWDLSERFEDTVVADFLAEYEAGRTPNPCVRCNEHIKFETLLEKAT-ALGFD 120 Query: 123 YIATGHYVRRADV-DGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGEL-EKPQVRK 180 +ATGHY R + DG L R ++ KDQSY L + E++A+++FP+G K +VR Sbjct: 121 AVATGHYARVVERPDGTRELHRSPNTEKDQSYVLAVMGPERLARAIFPLGGFASKAEVRA 180 Query: 181 IAEDLGLVTAKKKDSTGICFIGERKFREFLGRYLPAQPGKIITVDGDEIGEHQGLMYHTL 240 A GL + K DS ICF+ + R FL L ++PG+++ G +GEH G +T+ Sbjct: 181 EAARRGLAVSAKPDSYDICFVADGDTRGFLRDRLGSRPGEVVDTSGAVVGEHDGAYAYTV 240 Query: 241 GQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLHW------ 294 GQRKGL + G +P YV+D N +VV L + + W Sbjct: 241 GQRKGLAL-GRPAADGKPRYVLDVRTSTNQVVVGPAE---LLTVDRIAGDRAVWFTDPAP 296 Query: 295 ----------------VDREPFTGTMRCTVKTRYRQTDIPCTVKALDDDRIEVIFD-EPV 337 V P + ++ R T +P + D +EV P+ Sbjct: 297 GPRASRDVGLPTPDTDVPGRPSSPVDDVEIQVRAHGTPVPARILDAADGGVEVELTGTPL 356 Query: 338 AAVTPGQSAVFYNGEVCLGGGIIEQR 363 V GQS V Y G LG + + Sbjct: 357 RGVAAGQSLVVYRGTQVLGQATVTRA 382 >UniRef50_A8ES35 tRNA-specific 2-thiouridylase mnmA 1 n=5 Tax=Epsilonproteobacteria RepID=MNMA1_ARCB4 Length = 345 Score = 374 bits (960), Expect = e-102, Method: Composition-based stats. Identities = 118/365 (32%), Positives = 196/365 (53%), Gaps = 27/365 (7%) Query: 4 TAKKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYCTAAADLADAQAVCD 63 + KKV+VGMSGG+DSSV+A++LQ +GY+VEG+++K DG +L + V Sbjct: 2 SKKKVMVGMSGGIDSSVTAYMLQNEGYEVEGIYLKLHNRTDGYH----EKNLGYIEDVAK 57 Query: 64 KLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGADY 123 L I+ + ++ A ++ V++ F+ Y G TPNP + CN++IKF A L+FA + GA Y Sbjct: 58 FLNIKYYILDLADKFSKEVYDYFVDSYLTGTTPNPCVKCNRQIKFGAMLDFAKQH-GASY 116 Query: 124 IATGHYVRRADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQVRKIAE 183 +ATGHY + D KDQSYFL + + + +FP+ +K + K Sbjct: 117 LATGHYAK----TDGKFFYEADDKTKDQSYFLSQVDKDALKYMMFPLSTYKKEDIVKFGA 172 Query: 184 DLGLV---TAKKKDSTGICFIGERKFREFLGRYLP-AQPGKIITVDGDEIGEHQGLMYHT 239 L + +K +S ICF+ E + + + ++ Q G ++ +G +G+H+G ++T Sbjct: 173 KLDVAYKKITEKSESQEICFV-ETVYTDVVKKHANIDQEGDVLDENGKVVGKHKGFAHYT 231 Query: 240 LGQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLH-WVDRE 298 +G+R+G + +G +EP +V + ++N +VV + L ++ L+ ++D Sbjct: 232 IGKRRGFTV----KGAQEPHFVTKLNPKDNTIVVGKKE---ALEVNEVVGNNLNMFIDDT 284 Query: 299 PFTGTMRCTVKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTPGQSAVFYNGEVCLGGG 358 F+ C VK RYR PC V+ + D++ + EPV V GQ AVFY+ E +G Sbjct: 285 KFS----CNVKLRYRSVSTPCEVQ-IKDEKAYITLKEPVYGVAKGQLAVFYHEEKVIGSA 339 Query: 359 IIEQR 363 IE Sbjct: 340 WIEST 344 >UniRef50_B5Y9X9 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase n=1 Tax=Coprothermobacter proteolyticus DSM 5265 RepID=B5Y9X9_COPPD Length = 347 Score = 373 bits (959), Expect = e-102, Method: Composition-based stats. Identities = 119/357 (33%), Positives = 185/357 (51%), Gaps = 22/357 (6%) Query: 7 KVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDD-GEEYCTAAADLADAQAVCDKL 65 K+ VG+SGG+DS+VS L+++G+ V +F+ E + E+ C + A+ V Sbjct: 2 KIAVGLSGGIDSTVSLLRLKEEGHHVTAVFLNMLPEGEYQEKTCCSVDSQLLAKRVAMNQ 61 Query: 66 GIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGADYIA 125 G+ + + +V +F A K G TPNP + CN+ +K AF+E A + G D +A Sbjct: 62 GVPFEVWDLTETFQKHVINIFKAMVKKGLTPNPCVFCNRCVKIGAFVELAMQK-GFDAVA 120 Query: 126 TGHYVRRADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQVRKIAEDL 185 TGHY R+ + + L + +DS KDQSY L + + +A+ LFP+GEL + +V A Sbjct: 121 TGHYARQREGN----LYKAIDSWKDQSYMLALVEKQVLAKVLFPLGELTREEVISYAHSH 176 Query: 186 GLVTAKKKDSTGICFIGERKFREFLGRYLP--AQPGKIITVDGDEIGEHQGLMYHTLGQR 243 G+ + S ICF+ +F+ + + +PG II G IGEH+G Y+T+GQR Sbjct: 177 GI-KHVPRSSQDICFMPHGGMEQFITQNISEVTKPGPII-FRGHIIGEHRGYPYYTVGQR 234 Query: 244 KGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLHWVDREPFTGT 303 +GLG+ EP YV D +N + V E L S + ++ + T Sbjct: 235 RGLGV-----AHREPLYVKKIDPISNTVHVGTSEE---LFSEHMTVVMMN----QFSALT 282 Query: 304 MRCTVKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTPGQSAVFYNGEVCLGGGII 360 + +K RYR +P V+ ++ + V F +PV A+TPGQ AV Y G+ GII Sbjct: 283 RQVEIKIRYRAHSVPAFVEQSNEPILSVRFSQPVRAITPGQIAVAYEGDKVQWAGII 339 >UniRef50_A7ANM3 tRNA methyl transferase family protein n=1 Tax=Babesia bovis RepID=A7ANM3_BABBO Length = 665 Score = 372 bits (957), Expect = e-102, Method: Composition-based stats. Identities = 127/376 (33%), Positives = 188/376 (50%), Gaps = 21/376 (5%) Query: 5 AKKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGE-EYCTAAADLADAQAVCD 63 +V +SGGVDS+V+ WLL+ +G+ +E ++K W ++G+ C +ADL A V Sbjct: 286 QSRVACLVSGGVDSAVALWLLKSRGFDIEAFYLKVWSVENGDLGDCQWSADLEHAMGVTK 345 Query: 64 KLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGADY 123 L + LH V F Y V + F+A G TPNPD+ CN+ IKF AFL++A G + Sbjct: 346 LLNVPLHVVPFQDVYHQRVLDPFVAGASLGETPNPDVCCNEFIKFGAFLDYAV-RWGFSH 404 Query: 124 IATGHYVRRADV------DGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQ 177 IA+GHY + +RL D KDQ+YFL LS Q+ + +FP+ +L K + Sbjct: 405 IASGHYASIIEDLVPGTSTRIARLRLCRDLRKDQTYFLSRLSQSQLRRVMFPLSQLYKNE 464 Query: 178 VRKIAEDLGLVTAKKKDSTGICFIGERKFREFLGRYLPAQPGKIITVD-GDEIGEHQGLM 236 VR IA LG +K+S G+CF+G+ + FL L PG I+ D G+ IG H GL Sbjct: 465 VRTIARTLGFSNYDRKESMGLCFLGKVDVKSFLSHRLGEVPGPIVDHDTGNCIGRHHGLF 524 Query: 237 YHTLGQRKGLG-IGGTKEGTEEPWYVVDKDVENNILVVAQGHE-----HPRLMSVGLIAQ 290 + T+GQR+G+ + T + YVV KD++ N L V+ + P + Sbjct: 525 HFTIGQREGIARYLNSVRDTNQSRYVVAKDIDTNTLYVSTRYHTKCYTEPGSVRRRFRIS 584 Query: 291 QLHWVDRE---PFTGTMRCTVKTRYRQTDIPCTVKALDDDR---IEVIFDEPVAAVTPGQ 344 + W + T ++K R+ T + D D V ++ + GQ Sbjct: 585 DIRWNVPDFKRFITDPNSLSMKVRHSPTLCRGDISFDDLDTASGASVHLEKADIGLATGQ 644 Query: 345 SAVFYNGEVCLGGGII 360 AV Y+G CLG G I Sbjct: 645 YAVIYSGLNCLGAGKI 660 >UniRef50_Q2LVR6 tRNA-specific 2-thiouridylase mnmA 2 n=1 Tax=Syntrophus aciditrophicus SB RepID=MNMA2_SYNAS Length = 342 Score = 372 bits (956), Expect = e-101, Method: Composition-based stats. Identities = 126/340 (37%), Positives = 183/340 (53%), Gaps = 33/340 (9%) Query: 51 AAADLADAQAVCDKLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKA 110 + + A A+ +LGI LH + + + + + EY RTPNP ++CN++IKFK Sbjct: 11 SGSSEARARHAAHQLGIPLHVADVTETFDEEIVQYLTREYLVARTPNPCVVCNRKIKFKT 70 Query: 111 FLEFAAEDLGADYIATGHYVR--RADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLF 168 L +A + L ++ATGHY R G+ LLRGLD KDQSYFL+ L EQ+++ LF Sbjct: 71 LLYYA-DRLACHFVATGHYARVFHNRQTGRYALLRGLDQAKDQSYFLFLLGQEQLSRILF 129 Query: 169 PVGELEKPQVRKIAEDLGLVTAKKKDSTGICFIGERKFREFLGRYL---PAQPGKIITVD 225 P+GEL K +VR +A +G+ ++K+S ICFI + ++ F+ R++ PA PG I+ Sbjct: 130 PLGELTKKEVRSVALTMGVEAVREKESQEICFIPDDDYKTFIERHMGSSPAIPGDIVDRS 189 Query: 226 GDEIGEHQGLMYHTLGQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSV 285 G +G H G+ T+GQRKGL I + P+YV+ D E N +VV E Sbjct: 190 GRLLGSHNGIHSFTIGQRKGLHIAAPR-----PYYVLAIDREKNRVVVGHEEEQGF---S 241 Query: 286 GLIAQQLHWVDRE-PFTGTMRCTVKTRYRQTDI--------------PCTVKALD----D 326 GLI + W+D E P V+ RYR + P T + D Sbjct: 242 GLIVSGVSWIDGESPREEVFETLVRIRYRHRGVSSVVCPLSAGDEICPATGRPADHEEAG 301 Query: 327 DRIEVIFDEPVAAVTPGQSAVFYNGEVCLGGGIIEQRLPL 366 D++ + F EP AV PGQ+AVFY+ + +GGG IEQ +PL Sbjct: 302 DKLIIRFQEPQRAVAPGQAAVFYSDDRVIGGGWIEQGIPL 341 >UniRef50_B1VZW7 tRNA-specific 2-thiouridylase mnmA n=44 Tax=Actinobacteria (class) RepID=MNMA_STRGG Length = 378 Score = 371 bits (954), Expect = e-101, Method: Composition-based stats. Identities = 133/371 (35%), Positives = 186/371 (50%), Gaps = 17/371 (4%) Query: 1 MSETAKK---VIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNW----EEDDGEEYCTAAA 53 M++T+++ V+ MSGGVDS+V+A + G+ V G+ + G C Sbjct: 1 MTQTSQRPLRVLAAMSGGVDSAVAAARAAEAGHDVTGVHLALSANPQSFRTGARGCCTIE 60 Query: 54 DLADAQAVCDKLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLE 113 D DA+ D +GI + + A + ++V E F+AEY+AGRTPNP + CN++IKF A L Sbjct: 61 DSRDARRAADVIGIPFYVWDLAERFREDVVEDFVAEYEAGRTPNPCLRCNEKIKFAA-LL 119 Query: 114 FAAEDLGADYIATGHYVRRA-DVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGE 172 A LG D + TGHY DG L R D KDQSY L L +Q+A ++FP+G+ Sbjct: 120 DKALALGFDAVCTGHYATVVLAEDGSRELHRASDMAKDQSYVLGVLDEKQLAHAMFPLGD 179 Query: 173 --LEKPQVRKIAEDLGLVTAKKKDSTGICFIGERKFREFLGRYL-PAQPGKIITVDGDEI 229 K ++R AE GL AKK DS ICFI + + FL L G I+ G ++ Sbjct: 180 TLTTKDEIRAEAERRGLAVAKKPDSHDICFIADGDTQGFLANRLGGPAEGDILDESGTKL 239 Query: 230 GEHQGLMYHTLGQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIA 289 G H+G T+GQRKGL IG +P YV+D NN + V L L A Sbjct: 240 GTHEGAFGFTIGQRKGLKIGHPAP-DGKPRYVLDISPVNNTVTVGPVE---ALDVTALTA 295 Query: 290 QQLHWVDREPFTGTMRCTVKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTPGQSAVFY 349 + W P +G T + R + T + +D + V F EPV V PGQ+ V Y Sbjct: 296 IKPRWCGT-PPSGPGTYTAQLRAHGGESEVTAELVDGTELNVTFTEPVRGVAPGQAVVLY 354 Query: 350 NGEVCLGGGII 360 +G +G I Sbjct: 355 DGTRVVGSATI 365 >UniRef50_Q5K850 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase, putative n=2 Tax=Filobasidiella neoformans RepID=Q5K850_CRYNE Length = 478 Score = 369 bits (949), Expect = e-101, Method: Composition-based stats. Identities = 126/411 (30%), Positives = 209/411 (50%), Gaps = 57/411 (13%) Query: 1 MSETAKK----VIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWE--------------- 41 M E + V VGMSGGVDS+ + +L++ ++ +FM+NW+ Sbjct: 61 MEELGLREGDHVTVGMSGGVDSATTLRILREFPIHLDVVFMRNWDPLLSESPPESSLPPS 120 Query: 42 -------------EDDGEEYCTAAADLADAQAVCDKLGIE---LHTVNFAAEYWDNVFEL 85 + C D D V ++GI + V+ + EYW VFE Sbjct: 121 PISLAYSSGSTSNREQNLSPCQWERDWNDVLKVATQVGIPKDSIKLVDLSKEYWSRVFEP 180 Query: 86 FLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGADYIATGHYVRRADVD-----GKSR 140 + ++ G TPNPD+ CN+EIKF A L+ + ++ATGHY R A V G S+ Sbjct: 181 AVGVWERGGTPNPDVDCNREIKFGALLDVLPKK-DRHFLATGHYGRVAHVPLLSHPGPSK 239 Query: 141 LLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQVRKIAEDLGLVTAKKKDSTGICF 200 LLR +D +KDQ+Y+L ++ +Q+++++ P+G L K VR++AE GL AKK++S G+CF Sbjct: 240 LLRAVDKSKDQTYYLSQMTEQQLSRAILPLGSLLKTDVRRLAEHWGLPNAKKEESMGVCF 299 Query: 201 IGER-KFREFLGRYL-PAQPGKIITVDGDEIGEHQGLMYHTLGQRKGLGIGGTKEGTEEP 258 IGER KF +F+ +Y P + G ++ + G+ + EH+GL Y+T+GQR + +P Sbjct: 300 IGERGKFGDFISQYTSPPESGYLVNLSGERLAEHKGLWYYTIGQRARV------ANQLKP 353 Query: 259 WYVVDKDV--ENNILVVAQGHEHPRLMSVGLIAQQLHWVDREPF-----TGTMRCTVKTR 311 +V K V + ++V G +HP L+ + HW+ + ++ R Sbjct: 354 MFVAKKGVGEKGTDILVVPGSDHPMLLCKSVHTSDFHWIHDTFPRELLVKEPEKVGIQVR 413 Query: 312 YRQTDIPCTVKALDD-DRIEVIFDEPVAAVTPGQSAVFYNGEVCLGGGIIE 361 +R + + + + V F++P+ V+PGQ ++ CLG G+I+ Sbjct: 414 HRMNPVGGRIVVGGNVKDVTVEFNDPIVGVSPGQVVAIWHDGWCLGSGVID 464 >UniRef50_C0QYI3 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase n=2 Tax=Brachyspira RepID=C0QYI3_BRAHW Length = 352 Score = 369 bits (947), Expect = e-100, Method: Composition-based stats. Identities = 118/364 (32%), Positives = 180/364 (49%), Gaps = 25/364 (6%) Query: 7 KVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDG---EEYCTAA---ADLADAQA 60 K+ VGMS GVDS+ +A LL++QG V G+ M W D+ C + + + + Sbjct: 3 KIAVGMSAGVDSTTTAKLLKEQGNDVFGVTMLLWNGDERAPLSGSCYSPYQKNIVEECEK 62 Query: 61 VCDKLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAED-L 119 +GI+ + + + + V + YK G TPNP I+CN +IKF A E + L Sbjct: 63 YAKAIGIDYYAFDISEMFQKKVIDYVTESYKKGFTPNPCIMCNSQIKFMALFEAIEKQGL 122 Query: 120 GADYIATGHYV--RRADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQ 177 D ATGHY + + + LLRG + KDQSYFLY L+ +Q+++ +FP+ E K Sbjct: 123 EFDKFATGHYAGVKYDEKTKRYLLLRGKNLIKDQSYFLYRLTQDQLSKIMFPMHENTKED 182 Query: 178 VRKIAEDLGLVTAKKKDSTGICFIGERKFREFLGRYLPAQPGKIITVDG-DEIGEHQGLM 236 R IA + L A+K +S F R F + G II +D + +G H+G+ Sbjct: 183 TRNIAREYNLDVAEKSESQD--FFAGEYHRLF----DEDKEGSIINIDTNEILGHHKGIW 236 Query: 237 YHTLGQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLHWVD 296 ++T+GQRKGLGI +EP ++V D E N + V + + ++W+ Sbjct: 237 HYTVGQRKGLGI-----AYKEPLFIVALDSETNTVYVGNKNHT---FVNEVKIYDVNWIA 288 Query: 297 REPFTGTMRCTVKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTPGQSAVFYNGEVCLG 356 EP VKTR V +D++ I + F EP + GQS V Y+ ++ L Sbjct: 289 -EPKQKEFEALVKTRSAHKGTMAAVIPIDENTINIKFHEPTGIIAKGQSCVCYDNDITLC 347 Query: 357 GGII 360 GGI+ Sbjct: 348 GGIV 351 >UniRef50_A6NQI9 Putative uncharacterized protein n=1 Tax=Bacteroides capillosus ATCC 29799 RepID=A6NQI9_9BACE Length = 342 Score = 369 bits (947), Expect = e-100, Method: Composition-based stats. Identities = 121/354 (34%), Positives = 183/354 (51%), Gaps = 21/354 (5%) Query: 9 IVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYCTAAADLADAQAVCDKLGIE 68 ++G+SGGVDS+V+A LL + Y+V GL++ G+ ADA AV +L I Sbjct: 1 MLGLSGGVDSAVAAQLLSRD-YEVHGLYLDIGLGGTGQ---------ADAAAVAHRLDIP 50 Query: 69 LHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGADYIATGH 128 HT + E + V F A+Y AGRTP P CN +KF A L A E++GA+ +ATGH Sbjct: 51 FHTADIRQELENQVCGPFAADYLAGRTPLPCARCNPTVKFPALLALA-EEIGAEKVATGH 109 Query: 129 YVRRADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQVRKIAEDLGLV 188 Y R A LLR DQSY L L + + +FP+G+ EK VR +A L Sbjct: 110 YARTALAPDGRVLLRKGLPANDQSYMLSRLPQNILQKVIFPLGDYEKTAVRAMAGQAELP 169 Query: 189 TAKKKDSTGICFIGERKFREFLGRYLPAQP-GKIITVDGDEIGEHQGLMYHTLGQRKGLG 247 A K DS ICFI + + +L P G + DG +G H G+ +TLGQ +GLG Sbjct: 170 VADKPDSMEICFIPDGDYAAWLEHRGTVPPAGDFVDRDGRVLGRHGGIHRYTLGQGRGLG 229 Query: 248 IGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLHWVDREPFTGTMRCT 307 + G + +YV + D ++ +V++ G + LM+ + ++W+ + + T Sbjct: 230 VSGPHK-----YYVTEIDPAHDRVVLSDGSD---LMARRVYCADMNWLSVDGLPEPLEVT 281 Query: 308 VKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTPGQSAVFYNGEVCLGGGIIE 361 V+ R+ +T++ +A ++ + + D P A TPGQ AV Y G++ G I Sbjct: 282 VRLRHSKTELAAVARADGENVVLEMLD-PARAPTPGQLAVLYQGDIVAASGWIT 334 >UniRef50_D1PL47 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PL47_9FIRM Length = 348 Score = 368 bits (945), Expect = e-100, Method: Composition-based stats. Identities = 130/363 (35%), Positives = 183/363 (50%), Gaps = 25/363 (6%) Query: 3 ETAKKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYCTAAADLADAQAVC 62 E KV++GMSGGVDSSV+ +LQ+QG+ V+G ++ DG ++ AQ Sbjct: 8 EKQYKVLMGMSGGVDSSVAVRILQEQGFAVQGAVIRFSPAHDGA--------VSAAQESA 59 Query: 63 DKLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGAD 122 L I LH ++ + +V F Y AG TPNP ILCN +KF+ E A +LG Sbjct: 60 KTLQIPLHIIDARDAFEQHVILPFCESYCAGMTPNPCILCNPLVKFRLLAEKA-NELGCQ 118 Query: 123 YIATGHYVRRA-DVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQVRKI 181 +IATGHY R D G SR+ + +DQSY LY L E +++ + P+GE EK +R++ Sbjct: 119 FIATGHYARVEVDHKGVSRIAVPQSTARDQSYMLYRLPQEILSKLILPLGEFEKDDIREM 178 Query: 182 AEDLGLVTAKKKDSTGICFIGERKFREFLGRY-LPAQPGKIITVDGDEIGEHQGLMYHTL 240 A D+ L A DS ICFI + + ++ + G+ I G+++G H G+ ++T+ Sbjct: 179 ARDIHLACADAPDSMEICFIPDGDYAAYIRSRGFSPKTGRFIGPQGEDLGPHAGVDHYTV 238 Query: 241 GQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLHWVDREPF 300 GQRKGLGI + P +V +I + G E S + L D +P Sbjct: 239 GQRKGLGIAAGR-----PLFVKAILENGDIQLAETGQE----YSTHITLCDLTTPDGQPL 289 Query: 301 TGTMRCTVKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTPGQSAVFYNGEVCLGGGII 360 VK R PC L D V F +PV A PGQSAVFY + GGGII Sbjct: 290 PAG-DYLVKIRSAAKPSPC----LYDGAGAVRFPDPVRAPAPGQSAVFYRDGLVFGGGII 344 Query: 361 EQR 363 + Sbjct: 345 AET 347 >UniRef50_Q9ZJQ0 tRNA-specific 2-thiouridylase mnmA n=22 Tax=Campylobacterales RepID=MNMA_HELPJ Length = 342 Score = 367 bits (944), Expect = e-100, Method: Composition-based stats. Identities = 128/358 (35%), Positives = 202/358 (56%), Gaps = 22/358 (6%) Query: 7 KVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYCTAAADLADAQAVCDKLG 66 K+ V +SGGVDSS SA+ L++QG+++ G+++K + + + +AQ C+ LG Sbjct: 2 KIAVLLSGGVDSSYSAYSLKEQGHELVGIYLKLHASEKKHDLY-----IKNAQKACEFLG 56 Query: 67 IELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGADYIAT 126 I L ++F ++ V++ F+ Y+ G+TPNP LCN +KF L+ A LG + IAT Sbjct: 57 IPLEVLDFQKDFKSAVYDEFINAYEEGQTPNPCALCNPLMKFGLALDHAL-KLGCEKIAT 115 Query: 127 GHYVRRADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQVRKIAEDL- 185 GHY R ++D S + LD KDQSYFLY L HE IA+ +FP+G+L K ++ +A + Sbjct: 116 GHYARVKEIDKVSYIQEALDKTKDQSYFLYALEHEVIAKLVFPLGDLLKKDIKPLALNAM 175 Query: 186 -GLVTAK-KKDSTGICFIGERKFREFLGRYLP-AQPGKIITVDGDEIGEHQGLMYHTLGQ 242 L T + K+S ICF+ E+ + + L +++ + G + + G+ IG H+G M +T+G+ Sbjct: 176 PFLGTLETYKESQEICFV-EKSYIDTLKKHVEVEKEGVVKNLQGEVIGTHKGYMQYTIGK 234 Query: 243 RKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLHWVDREPFTG 302 RKG + +G EP +VV D + N L+V + + L + L A+ + ++ G Sbjct: 235 RKGFSV----KGALEPHFVVGIDAKKNELIVGKKED---LATHSLKAKNKS-LTKDFKDG 286 Query: 303 TMRCTVKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTPGQSAVFYNGEVCLGGGII 360 +K RYR V +L D IEV F EP V GQ+ V Y ++ LGGG+I Sbjct: 287 --EYFIKARYRSVPTKAFV-SLKDGMIEVEFKEPFYGVAKGQALVVYKDDILLGGGVI 341 >UniRef50_Q54I63 Mitochondrial tRNA-specific 2-thiouridylase 1 n=1 Tax=Dictyostelium discoideum RepID=MTU1_DICDI Length = 451 Score = 365 bits (937), Expect = 2e-99, Method: Composition-based stats. Identities = 125/390 (32%), Positives = 197/390 (50%), Gaps = 34/390 (8%) Query: 4 TAKKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYCTAAADLADAQAVCD 63 KV +GMSGGVDS+++A LL+ QG+ V G+F+K+W+E + C D DA + Sbjct: 63 KKPKVCIGMSGGVDSTITAKLLKLQGFDVTGVFIKSWDEVEDTGRCQGERDWKDALEASN 122 Query: 64 KLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGADY 123 L I ++ +F +YW+ VF FL +YK G TPNPD+ CN+EIKF F +FA E+ G DY Sbjct: 123 FLDIPMYKADFVKDYWNRVFVDFLKDYKNGLTPNPDVWCNREIKFDLFFDFAKENFGVDY 182 Query: 124 IATGHYVRRADVDGKS--------RLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEK 175 IATGHY + +L R +D NKDQ++FL E++ Q++FP+G K Sbjct: 183 IATGHYSNLYYGEENVGDNNNNNLQLHRAIDKNKDQTFFLCMTKGERLKQAIFPIGGFTK 242 Query: 176 PQVRKIAEDLGL--VTAKKKDSTGICFIGERKFREFLGRYLPAQPGKIITVDGDEI---G 230 + A+ + KK S GICFIG+R +FL +Y+ +PG + + Sbjct: 243 ENIVSFAKTIPNFSKITSKKSSRGICFIGKRPLPDFLSQYMTLKPGDFFDISTNSFIKGK 302 Query: 231 EHQGLMYHTLGQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRL-MSVGLIA 289 +H+G + +T+GQ+ + + E +++V D+E NI+ V + + + Sbjct: 303 KHKGSVCYTMGQKANI------DSLSERYFIVRSDIERNIVYVCPESQFDQFSLYYEFNT 356 Query: 290 QQLHWVDREPFTGTMRCTVK----TRYRQTDIPCTVKALD-----DDRI--EVIFDEPVA 338 +W++ P K R+R + T+K D + V D+P+ Sbjct: 357 HSFNWINEIPTEVKSEQGFKGRGICRHRGDVVNLTIKDTGKTSPIDGSVIYSVNLDQPLR 416 Query: 339 AVTPGQSAVFYN--GEVCLGGGIIEQRLPL 366 +V GQ ++ + C GGG+I PL Sbjct: 417 SVASGQILCLFDRNTDRCFGGGVINSS-PL 445 >UniRef50_D2NS67 Predicted tRNA methyltransferase n=4 Tax=Actinomycetales RepID=D2NS67_9MICC Length = 407 Score = 364 bits (935), Expect = 3e-99, Method: Composition-based stats. Identities = 128/390 (32%), Positives = 188/390 (48%), Gaps = 32/390 (8%) Query: 7 KVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKN----WEEDDGEEYCTAAADLADAQAVC 62 K++ MSGGVDS+V+A + G++V G+ + G C D DA+ VC Sbjct: 2 KILAAMSGGVDSAVAAARAVEAGHEVVGVHLALSRMPGTLRTGSRGCCTLEDSMDARRVC 61 Query: 63 DKLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGAD 122 +LGI +F+ + ++V + F++EY+AGRTPNP + CN++IKF A L A LG D Sbjct: 62 SQLGIPFFVWDFSERFKEDVVDDFISEYEAGRTPNPCMRCNEKIKFAA-LLERALALGFD 120 Query: 123 YIATGHYVR-RADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGEL-EKPQVRK 180 + TGHY R DG L R D KDQSY L L+HEQ+ + FP+ + K QVR Sbjct: 121 AVVTGHYARVITTEDGNRELHRAADWAKDQSYVLGVLTHEQLKHAWFPLADTPSKAQVRA 180 Query: 181 IAEDLGLVTAKKKDSTGICFIGERKFREFLGRYLPAQPGKIITVDGDEIGEHQGLMYHTL 240 A + G AKK DS ICFI E R +LG ++ +PG I G+ +GEH G +T+ Sbjct: 181 EAAERGFSVAKKPDSYDICFIPEGDTRAWLGDHITMRPGLIKDTHGEVLGEHPGAQAYTV 240 Query: 241 GQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGH-------EHPRLMSVGLIAQQLH 293 GQRKGL + G +P +V++ + N ++V R G+ +Q Sbjct: 241 GQRKGLAL-GRPAADGKPRFVLEVRPKENEVIVGSRELLAVHEIRGIRATWAGVPVEQAA 299 Query: 294 WVDREPF-----TGTMRCTVKTRYRQTDIPCTV--------KALDDDRIE----VIFDEP 336 EP + T + R + +A ++ + V +P Sbjct: 300 RFLEEPAQLGARSEEFEVTAQVRAHADPVRAKAYMTWAPDPEAEEEGTLRLETVVRLLDP 359 Query: 337 VAAVTPGQSAVFYNGEVCLGGGIIEQRLPL 366 ++ V PGQ+ V Y G LG I + L Sbjct: 360 LSGVAPGQTMVLYQGTRVLGQSTIARAYSL 389 >UniRef50_B8LDI7 Predicted protein (Fragment) n=1 Tax=Thalassiosira pseudonana CCMP1335 RepID=B8LDI7_THAPS Length = 509 Score = 363 bits (932), Expect = 6e-99, Method: Composition-based stats. Identities = 137/407 (33%), Positives = 198/407 (48%), Gaps = 56/407 (13%) Query: 3 ETAKKVIVGMSGGVDSSVSAWLLQQ--QGYQVEGLFMKNW-----EEDDGEEYCTAAADL 55 T +++V MSGGVDSS + ++ + G +V GL M NW + D T + Sbjct: 92 RTRPRIVVAMSGGVDSSYTTIIMYKICDGIEVIGLHMSNWNALDEDPDISNATNTREKEY 151 Query: 56 ADAQAVCDKLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFA 115 DAQ+V L I LH V+FA+EYW VFE F+ PNPD CN IKF A ++A Sbjct: 152 TDAQSVAQHLSIPLHRVSFASEYWIQVFEPFVESLAELTMPNPDYGCNTFIKFGAMKKYA 211 Query: 116 AEDLGADYIATGHYVRRAD-----VDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPV 170 + AD++ATGHY + + S + D +KDQSYFL + E +FP+ Sbjct: 212 MGQMNADFVATGHYAQLWHRGYTGDNDSSGVF--PDRSKDQSYFLSGVKGEAFRNVIFPL 269 Query: 171 GELEKPQ----VRKIAEDLGLVTAKKKDSTGICFIGERKFREFLGRYL--PAQPGKIITV 224 G L K Q VR IA + TA K+DS GICFIG+R F +F+ +YL P PG + V Sbjct: 270 GHLAKSQTQQTVRDIAHQAAIPTASKRDSMGICFIGKRNFGQFVSQYLPEPPAPGTFVDV 329 Query: 225 D-GDEIGEHQGLMYHTLGQRKGLGIGGTKEGTEEPWYVVDKDV---ENNILVVAQGHEHP 280 D G+ +G H+G M++T+GQ + G ++V K + N + V HP Sbjct: 330 DTGEIVGYHEGSMHYTIGQGAKIS------GASARYFVCGKGSTGDDGNTVFVCNSTHHP 383 Query: 281 RLMSVGLIA--QQLHWV------DREPF---------TGTMRCTVKTRYRQTDIPCTVKA 323 L + L +W+ D + F ++ +TR+ Q CTV Sbjct: 384 SLYTDELSVDFDAFNWIGLGEKSDTDSFGHVPYPLVEGRPIKLLARTRHLQPLAQCTVSW 443 Query: 324 LDD------DRIEVIFDEPVAAVTPGQSAVFY---NGEVCLGGGIIE 361 ++ V F++P+ A+TP Q Y +G +CLGGG I+ Sbjct: 444 QRSRDANSLGKLTVQFEKPMRAITPCQVVSLYAGSDGLICLGGGPIK 490 >UniRef50_Q7U320 tRNA-specific 2-thiouridylase mnmA n=3 Tax=Helicobacteraceae RepID=MNMA_HELHP Length = 345 Score = 362 bits (931), Expect = 1e-98, Method: Composition-based stats. Identities = 127/362 (35%), Positives = 193/362 (53%), Gaps = 24/362 (6%) Query: 7 KVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYCTAAADLADAQAVCDKLG 66 KV + MSGGVDSS A LL QGY+V G+++K +++ + +A+ + V L Sbjct: 2 KVALLMSGGVDSSYCAHLLSSQGYEVIGIYLKLHDKNKKHDIY-----IANCEQVAAHLH 56 Query: 67 IELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGADYIAT 126 I+ ++ E+ +V++ F++ YK G+TPNP +CN +KF L+ A E LG DYIAT Sbjct: 57 IDFQVLDLREEFKKSVYDTFVSSYKEGKTPNPCAICNPLMKFGLGLQKALE-LGCDYIAT 115 Query: 127 GHYVRRADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQVRKIAEDLG 186 GHY + +V+G R+ + +D +KDQSYFLY L E I + +FP+G L K ++K A +L Sbjct: 116 GHYAQIKEVNGIKRIAKAVDESKDQSYFLYALPQEAIDRIIFPLGALLKEDIKKTALEL- 174 Query: 187 LV----TAKKKDSTGICFIGERKFREFLGRYLPA-QPGKIITVDGDEIGEHQGLMYHTLG 241 L K+S ICF+ E+ + + L + G + +G IG H+G M++T+G Sbjct: 175 LPFLGTLQTYKESQEICFV-EQSYIDILKLHDKVDNEGVVRNSNGKAIGTHKGYMHYTIG 233 Query: 242 QRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLHWVDREPFT 301 +RKG + G+ EP YV + +NN +VV E L + A L+ + F Sbjct: 234 KRKGFSVF----GSHEPHYVKAINPQNNEIVVGTKEE---LAIDSIKA--LNKSLPQAFN 284 Query: 302 GTMRCTVKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTPGQSAVFYNGEVCLGGGIIE 361 G + VK RYR T + + + I E V GQ+ V Y + LGGG+I Sbjct: 285 GGI-YDVKVRYRSTPLKAQIDIQGE-FIYAKLLESAYGVAQGQALVLYQEDCVLGGGVIT 342 Query: 362 QR 363 Q Sbjct: 343 QA 344 >UniRef50_A5E201 Putative uncharacterized protein n=1 Tax=Lodderomyces elongisporus RepID=A5E201_LODEL Length = 509 Score = 361 bits (926), Expect = 3e-98, Method: Composition-based stats. Identities = 124/405 (30%), Positives = 187/405 (46%), Gaps = 51/405 (12%) Query: 6 KKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYCTAAADLADAQAVCDKL 65 ++I+ MS GVDSS+ A L + V G++M NW + D D Q VC +L Sbjct: 89 DRIIIAMSSGVDSSLCAALYASKYKNVHGIYMANWRQSSQ----CTERDWRDVQTVCKQL 144 Query: 66 GIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGAD--- 122 I +N EYW NVF+ + Y G TPNPD+ CN+ +KF E E G + Sbjct: 145 DISCERINLELEYWQNVFQPMIDGYAKGLTPNPDVGCNRYVKFGRLCEIMEERYGNEKGK 204 Query: 123 -YIATGHYVRRAD-------------------------------VDGKSRLLRGLDSNKD 150 ++ TGHY R + + LLRGL + KD Sbjct: 205 WWLVTGHYARVMKKIVKEPSLAHENVDTSIVKQTPTPTNDTDFKANEEYHLLRGLSTRKD 264 Query: 151 QSYFLYTLSHEQIAQSLFPVGELEKPQVRKIAEDLGLVTAKKKDSTGICFIG---ERKFR 207 QSY+L T+S + L P+G K Q R++A++ L T++K D G+CF+ FR Sbjct: 265 QSYYLSTISPLILPHLLLPLGHQLKSQTRQLAQNYKLHTSQKPDLQGLCFVEPSNHSNFR 324 Query: 208 EFLGRYLPAQPGKIITVDGDEIGEHQGLMYHTLGQRKGLGIGGTKEGTEEPWYVVDKDVE 267 +FL Y+ PG I+T DG G+H+GL + T+GQ+ + + + W+V +K+V Sbjct: 325 DFLAEYIEPNPGNIVTTDGKVWGKHKGLWHATIGQKSSVLMPQGDPQYKGVWFVAEKNVA 384 Query: 268 NNILVVAQGHEHPRLMSVGLIAQQLHWVDREPFTGTM--RCTVKTRYRQTDIPCTVKALD 325 N +V+ +GH++P L S + WV + V ++ VK + Sbjct: 385 KNEIVIVRGHDNPLLFSQVVTLDTCEWVYEWEKVQQLKEESAVSFQFSSLSKAILVKRIT 444 Query: 326 -------DDRIEVIFDEPVAAVTPGQSAVFYNGEVCLGGGIIEQR 363 ++++ EPV AV PGQ V Y G LG G+I + Sbjct: 445 VLGNKQFGKQLKIELIEPVRAVAPGQQGVLYRGNQVLGSGMIVKT 489 >UniRef50_B9L0K7 tRNA methyl transferase n=2 Tax=Thermomicrobia (class) RepID=B9L0K7_THERP Length = 370 Score = 360 bits (925), Expect = 5e-98, Method: Composition-based stats. Identities = 124/366 (33%), Positives = 193/366 (52%), Gaps = 21/366 (5%) Query: 2 SETAKKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDG-EEYCTAAADLADAQA 60 + A++V+V +SGGVDS+V+A+LL+Q G++ G+ ++ ++ G + C ADA+A Sbjct: 6 TTMAERVLVALSGGVDSAVTAYLLKQAGWEPVGIHLRLFDAAPGLDGVCCGDVAAADARA 65 Query: 61 VCDKLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLG 120 V ++GI + E+ V + EY RTPNP + CN ++ A LE A E LG Sbjct: 66 VAAQIGIPFFVRDLRPEFEQEVVAPTVEEYARARTPNPCVFCNHRVRIPALLELA-EALG 124 Query: 121 ADYIATGHYVRRADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQVRK 180 ++ATGHYVR+ G RL D+ +DQSY LY L+ +Q+ + LFP+GE +KP VR Sbjct: 125 IRFVATGHYVRKVATPGGWRLAEARDAQRDQSYVLYRLTADQLERLLFPLGEYDKPTVRA 184 Query: 181 IAEDLGLVTAKKKDSTGICFIGE-RKFREFLGRYLP--AQPGKIITVDGDEIGEHQGLMY 237 IA++ GL A+K S +CF + + P ++PG ++ + +G H G+ + Sbjct: 185 IAQEAGLFVARKPSSVDLCFAKTYGGIGRLVSQRRPETSRPGPLLDERDEVVGTHPGIAF 244 Query: 238 HTLGQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLHWVDR 297 T+GQR+GL T E YV + D ++ VA R+++ + W D Sbjct: 245 VTIGQRRGLEWARP---TPERRYVAEIDPATAVVRVAPRE---RILTRAVRLADPVWHDP 298 Query: 298 EPFTGTMRCTVKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTPGQSAVFYNGEVCLGG 357 + + RY+ IP ++ VIFDEP + PGQS V Y G+ +GG Sbjct: 299 -----VLTADARLRYQGPRIPARIEGD-----WVIFDEPAPPLAPGQSVVLYVGDRVVGG 348 Query: 358 GIIEQR 363 GI E+ Sbjct: 349 GIAEEV 354 >UniRef50_C7LUQ7 tRNA(5-methylaminomethyl-2-thiouridylate)-methyl transferase n=1 Tax=Desulfomicrobium baculatum DSM 4028 RepID=C7LUQ7_DESBD Length = 347 Score = 360 bits (924), Expect = 5e-98, Method: Composition-based stats. Identities = 125/360 (34%), Positives = 174/360 (48%), Gaps = 22/360 (6%) Query: 7 KVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYCTAAADLADAQAVCDKLG 66 K + +SGG DS +S LL++ G +V + + DD + +C KL Sbjct: 3 KTAIALSGGADSLMSLLLLRETGAEVMAVHARFLGADDEALH-------ERLHGLCAKLR 55 Query: 67 IELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGADYIAT 126 + H V+ E+ + V F+ Y++G TPNP CN IKF L+ +LGAD +AT Sbjct: 56 VPFHLVDLRREFEELVIAPFVRAYQSGLTPNPCATCNPAIKFGLLLDRV-RELGADRLAT 114 Query: 127 GHYVRRADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQVRKIAEDLG 186 GHY R A + L RGLD++KDQSYFL + E+ Q +FP+ + K VR+ + G Sbjct: 115 GHYARLARTPHGAALYRGLDADKDQSYFLSRVPRERFEQVIFPLADWTKSAVRQALAERG 174 Query: 187 LVTAKKKDSTGICFIGERKFREFLGRYLP--AQPGKIITVDGDEIGEHQGLMYHTLGQRK 244 L ++S +CFI +R+FL PG I DG +G H GL HTLGQRK Sbjct: 175 LTPPAGRESQEVCFIP-SDYRDFLRERNVRLGGPGPITLADGTVLGRHAGLWNHTLGQRK 233 Query: 245 GLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLHWVDREPFTGTM 304 GLGI +P YV KD N L+V E +S G + + P Sbjct: 234 GLGI-----AYSQPLYVTGKDFVQNRLLVGPKSET---LSSGCRTGIPNLLW-PPELWPG 284 Query: 305 RCTVKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTPGQSAVFYNGE-VCLGGGIIEQR 363 +T YRQ P V ++D + + F EP TPGQ A Y+ E L G +IE+ Sbjct: 285 EILAQTIYRQRPEPARV-SVDQTGMTITFPEPRPMPTPGQVAAVYSAEGQVLAGAVIEEA 343 >UniRef50_B1VFZ9 tRNA-specific 2-thiouridylase mnmA n=65 Tax=Bacteria RepID=MNMA_CORU7 Length = 406 Score = 359 bits (922), Expect = 9e-98, Method: Composition-based stats. Identities = 131/385 (34%), Positives = 196/385 (50%), Gaps = 34/385 (8%) Query: 7 KVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDD----GEEYCTAAADLADAQAVC 62 +V+ MSGGVDS+V+A + G++V G+ + + + G C + D ADA+ V Sbjct: 2 RVVAAMSGGVDSAVAAARALEAGHEVIGVHLALSQSPEAVRAGSRGCCSLEDSADARRVA 61 Query: 63 DKLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGAD 122 DKLGI + +F+ + +V + F+ Y G TPNP + CN++IKF+A L+ + LG D Sbjct: 62 DKLGIPFYVWDFSDRFKADVIDNFVDSYAIGETPNPCLRCNEKIKFEALLDRSI-ALGFD 120 Query: 123 YIATGHYVRRADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQVRKIA 182 + TGHY + D L RG+D++KDQSY L L+ EQ+A +FPVG+ KP++R+ A Sbjct: 121 AVVTGHYAQLHD----GVLRRGVDADKDQSYVLGVLTDEQLAHCMFPVGDTVKPEIREEA 176 Query: 183 EDLGLVTAKKKDSTGICFIGERKFREFLGRYLPAQPGKIITVDGDEIGEHQGLMYHTLGQ 242 D G A K DS ICFI + + + FLG + +PG + G+ + EH G+ T+GQ Sbjct: 177 ADAGFGVANKPDSHDICFIPDGRTQAFLGSKIGLRPGLVRDTGGETVAEHDGVYGFTVGQ 236 Query: 243 RKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLHWVDREPFTG 302 RKGLG+ P YV D D + V + L G+IA +L +D E Sbjct: 237 RKGLGLPRETL-DGRPRYVTDIDAHTGTVTVGTRED---LRVGGIIADRLKRLDPEVHGR 292 Query: 303 TMRCTVKTRYRQTDIPCTVKALDD-------DRIEVIFDEPVA----------AVTPGQS 345 C V+ R +P + +DD R++ + P V GQ+ Sbjct: 293 EFDCEVQVRAHGGVVPARARLVDDPTPVTPAGRVKEADELPWRLELELLQPLEGVARGQA 352 Query: 346 AVFY----NGEVCLGGGIIEQRLPL 366 AV Y +G++ LG G I L Sbjct: 353 AVVYRPDEDGDILLGSGTIRATTAL 377 >UniRef50_C7GYK6 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase n=1 Tax=Eubacterium saphenum ATCC 49989 RepID=C7GYK6_9FIRM Length = 348 Score = 359 bits (921), Expect = 1e-97, Method: Composition-based stats. Identities = 112/361 (31%), Positives = 183/361 (50%), Gaps = 30/361 (8%) Query: 7 KVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYCTAAADLADAQAVCDKLG 66 KV VG SGGVDS+ + LL+++GY V ++++ E A D+++ + + + +G Sbjct: 9 KVAVGFSGGVDSTAACLLLKEKGYDVHPVYLRMGE----------AEDISELKKIANDIG 58 Query: 67 IELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGADYIAT 126 +EL ++ + ++V + F Y G TPNP I+CN +KF+ ++FA ++ G D IAT Sbjct: 59 LELKVLDLTDRFNNSVVDNFKKAYMNGMTPNPCIVCNPLVKFRGLMDFADDN-GIDLIAT 117 Query: 127 GHYVRRADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGEL-EKPQVRKIAEDL 185 GHY R L RG ++ KDQSY LY L + + P+GE K +R I Sbjct: 118 GHYARIVKNGDNPVLCRGRNAQKDQSYMLYGLDSNVFERLILPLGEYGNKEDIRNILRTN 177 Query: 186 GLVTAKKKDSTGICFIGER-KFREFLGRYLPAQPGKIITVDGDEIGEHQGLMYHTLGQRK 244 ++ ++K DS ICF+ + +++F P + G+ + +G+ +G H+G+ T+GQRK Sbjct: 178 EIINSEKPDSQEICFLKQDESYKKF----FPEREGEFVDAEGNILGRHRGIHNFTVGQRK 233 Query: 245 GLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLHWVDREPFTGTM 304 GLGI +P YV+ N +++ E L + ++ + T Sbjct: 234 GLGI-----TFSKPMYVLGIAASTNRVMLGSEEE---LYKERATITDMKYLGNDISKCTD 285 Query: 305 RCT-----VKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTPGQSAVFYNGEVCLGGGI 359 K RY + L +E++F+EPV A+ PGQS V Y +V + GGI Sbjct: 286 DAHKGLYRAKVRYSSAEYEIKEINLKGSDLEIVFNEPVRAIAPGQSLVVYCRDVVILGGI 345 Query: 360 I 360 I Sbjct: 346 I 346 >UniRef50_B2GL48 tRNA-specific 2-thiouridylase mnmA n=6 Tax=Micrococcineae RepID=MNMA_KOCRD Length = 383 Score = 356 bits (915), Expect = 6e-97, Method: Composition-based stats. Identities = 127/378 (33%), Positives = 182/378 (48%), Gaps = 26/378 (6%) Query: 7 KVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEED----DGEEYCTAAADLADAQAVC 62 +V+ MSGGVDS+V+A G++V G+ + G C D DA Sbjct: 2 RVLAAMSGGVDSAVAAARAVDAGHEVTGVHLALSRTPGTLRTGARGCCTIEDSRDAWRAA 61 Query: 63 DKLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGAD 122 +KLGI + +F+ + +V + F+AEY AGRTPNP + CN++IKF A L A LG D Sbjct: 62 EKLGIPYYVWDFSERFQADVVDDFVAEYAAGRTPNPCMRCNEKIKFAA-LLEKALALGFD 120 Query: 123 YIATGHYVRRAD-VDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGEL-EKPQVRK 180 + TGHY + + DG L R D KDQSY L L+ EQ+ ++FP+ E K QVR Sbjct: 121 AVCTGHYAKVVEGPDGHKELHRAADWAKDQSYVLGVLTAEQLEHAIFPLAETPSKAQVRA 180 Query: 181 IAEDLGLVTAKKKDSTGICFIGERKFREFLGRYLPAQPGKIITVDGDEIGEHQGLMYHTL 240 AE+ GL A K DS ICFI + R +L ++ PG+I+ +G+E+GEH+G +T+ Sbjct: 181 EAEERGLSVATKPDSHDICFIPDGDTRGWLADHMDLDPGRIVDTEGNELGEHRGAQAYTV 240 Query: 241 GQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLHWVDREPF 300 GQR+GL IG +P +V++ + N +VV L + + W P Sbjct: 241 GQRRGLHIGRPAP-DGKPRFVLEIRPKTNEVVVGPEQ---LLAIDVMEGIRPSWAGLPPR 296 Query: 301 T------------GTMRCTVKTRYRQTDIPCTV---KALDDDRIEVIFDEPVAAVTPGQS 345 TV+ R P ++ R+ V D V PGQ+ Sbjct: 297 EVAALGADPKARSEEFEVTVQVRAHGDPAPARAWLTRSEGTPRLHVRLDTAQRGVAPGQT 356 Query: 346 AVFYNGEVCLGGGIIEQR 363 V Y G LG I+ Sbjct: 357 MVLYQGTRVLGQATIDAA 374 >UniRef50_C7QYX8 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase n=13 Tax=Actinomycetales RepID=C7QYX8_JONDD Length = 423 Score = 356 bits (914), Expect = 8e-97, Method: Composition-based stats. Identities = 123/420 (29%), Positives = 190/420 (45%), Gaps = 64/420 (15%) Query: 7 KVIVGMSGGVDSSVSAWLLQQQGYQVEGLFM---KNWEE-DDGEEYCTAAADLADAQAVC 62 +V+ MSGGVDS+V+A L + G+ V G+ M +N + G C + D +DA+ Sbjct: 2 RVLAAMSGGVDSAVAAALAVEAGHDVVGVHMALSRNRNQFRSGSRGCCSIEDASDARRAA 61 Query: 63 DKLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGAD 122 D LGI + + + ++ D V F++EY+AGRTPNP + CN+ IKF+A L+ A LG D Sbjct: 62 DILGIPYYVWDLSEKFEDTVVADFISEYEAGRTPNPCVRCNEHIKFEALLDKAM-ALGFD 120 Query: 123 YIATGHYVRRADVDGK---------SRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGEL 173 +ATGHY + D D L R + KDQSY L + +++ ++FP+G Sbjct: 121 AVATGHYAQIIDRDTTDVHGQPTVIRELHRSPNDAKDQSYVLAVMGPDRLKNAIFPLGGY 180 Query: 174 -EKPQVRKIAEDLGLVTAKKKDSTGICFIGERKFREFLGRYLPAQPGKIITVDGDEIGEH 232 K +VR AE GL + K DS ICF+ + + FL L ++PG+++ DG+ +G H Sbjct: 181 ASKDEVRAEAERRGLSVSNKPDSYDICFVADGDTKGFLRDRLGSRPGEVLDTDGNVVGTH 240 Query: 233 QGLMYHTLGQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQL 292 G +T+GQRKGL + G +P YV+ +N ++V L ++ + Sbjct: 241 DGAYAYTVGQRKGLAL-GRPAEDGKPRYVLGVSTRDNTVIVGPSE---LLSVNRIVGDKA 296 Query: 293 HWVDREPFTGT---------MRCTVKTRYRQTDIPCTVKALDDDR--------------- 328 W + T + R +P + + DR Sbjct: 297 VWFATDILTDASLTTEGSDWFAIEGQVRAHGAALPGRARIVPLDRARDLMPAGREELAAE 356 Query: 329 ----------------IEVIFDEPVAAVTPGQSAVFYNGEVCLGGGII-----EQRLPLP 367 +EV P+ V GQS V Y G +G + + LP P Sbjct: 357 CTRVEGADPGHDHTALVEVELQSPLRGVAAGQSIVLYRGTRVIGQATVVASDRKATLPTP 416 >UniRef50_Q313S6 tRNA-specific 2-thiouridylase mnmA n=7 Tax=Desulfovibrionales RepID=MNMA_DESDG Length = 356 Score = 355 bits (912), Expect = 1e-96, Method: Composition-based stats. Identities = 124/362 (34%), Positives = 168/362 (46%), Gaps = 21/362 (5%) Query: 8 VIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYCTAAADLADAQAVCDKLGI 67 + V +SGG DS + + + G+QV L D E T A + + C LG Sbjct: 3 IAVAVSGGTDSLFALLQVLEAGHQVTALHAHFLSPHDTPE--TTAHNTQAIEKACRALGA 60 Query: 68 ELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGADYIATG 127 + H + +A + +V E F+ Y+ GRTPNP CN +KF + A LGA IATG Sbjct: 61 DFHVEDLSAAFRKHVIEPFIDAYRQGRTPNPCARCNASMKFGLLADTA-RKLGAQAIATG 119 Query: 128 HYVRRADVDGKS----RLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQVRKIAE 183 HY R + L RG D KDQSYFL + ++A ++FP+G K VR + Sbjct: 120 HYARLQPDLPRPGNTVSLWRGDDPAKDQSYFLSLVPQHRLACAVFPLGGWRKQDVRAHLK 179 Query: 184 DLGLVTAKKKDSTGICFIGERKFREFLGRYLPAQP--GKIITVDGDEIGEHQGLMYHTLG 241 G+V +S ICFI +R +L + P G ++ DG +G H GL +T G Sbjct: 180 QRGIVPPLPSESQEICFIPGDDYRAYLTAHAAGLPGAGPMVLRDGHVVGHHNGLWQYTEG 239 Query: 242 QRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLHWVDREPFT 301 QR+GLGI EP YV++KDV N LVV + L + G ++ + P Sbjct: 240 QRRGLGI-----AWSEPLYVLEKDVSRNALVVGTRKQ---LTARGCRCVGVNTLV-PPDQ 290 Query: 302 GTMRCTVKTRYRQTDIPCTVKALDDD--RIEVIFDEPVAAVTPGQSAVFYN-GEVCLGGG 358 VKTRYRQT I V D + VIF GQ A Y+ L GG Sbjct: 291 WPDAVYVKTRYRQTMIAAQVTPDADGADTMRVIFAASHTPPAAGQVAAVYDAAGRVLAGG 350 Query: 359 II 360 II Sbjct: 351 II 352 >UniRef50_C0GTF7 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase n=1 Tax=Desulfonatronospira thiodismutans ASO3-1 RepID=C0GTF7_9DELT Length = 344 Score = 355 bits (911), Expect = 2e-96, Method: Composition-based stats. Identities = 120/362 (33%), Positives = 180/362 (49%), Gaps = 26/362 (7%) Query: 7 KVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYCTAAADLADAQAVCDKLG 66 ++ V +SGG+DS S +L+++G+ V L + + D + +C LG Sbjct: 2 RIAVAVSGGLDSLASLVMLREEGHDVLALHARFFPRLDEHLE-------KRLKGICTSLG 54 Query: 67 IELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGADYIAT 126 +E+H E+ V + F+ +Y G TPNP CN IKF L+ A E LGA +AT Sbjct: 55 VEMHVTLLQDEFAARVIDPFVQDYLDGLTPNPCARCNMRIKFGLLLDRALE-LGASALAT 113 Query: 127 GHYVRRADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQVRKIAEDLG 186 GHY L+R LD KDQSYFL + ++A++ FP+ K +++ ++ Sbjct: 114 GHYAGIKKNSSGPVLMRALDQAKDQSYFLCLVPPRRLARAKFPMYHHFKSSMQEFLQNRN 173 Query: 187 LVTAKKKDSTGICFIGERKFREFLGRYLPAQ----PGKIITVDGDEIGEHQGLMYHTLGQ 242 + +++S ICFI +R+F+ L PG I+ G +G HQGL +T GQ Sbjct: 174 ITVPAREESNEICFIP-GDYRDFIAGRLEKSHEPLPGPIVDSSGRTLGRHQGLWRYTPGQ 232 Query: 243 RKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLHWVDREPFTG 302 R+GLGI + P YV+ KD+ +N LVV E L + A+ ++ + EP Sbjct: 233 RRGLGI-----AFKHPLYVLRKDLASNTLVVGAREE---LGAGEFQARDVN-ILEEPRKW 283 Query: 303 TMRCTVKTRYRQTDIPCTVKALDDDRIEVIFD-EPVAAVTPGQSAVFYN-GEVCLGGGII 360 + V+TRYRQ P V+ R+ V + EP V PGQ A Y+ L GGII Sbjct: 284 PLDLLVQTRYRQKARPAEVELWG-QRMRVRYKGEPGLPV-PGQVAAVYSPKGQVLAGGII 341 Query: 361 EQ 362 +Q Sbjct: 342 QQ 343 >UniRef50_A7ZEK1 tRNA-specific 2-thiouridylase mnmA n=4 Tax=Campylobacter RepID=MNMA_CAMC1 Length = 340 Score = 354 bits (908), Expect = 4e-96, Method: Composition-based stats. Identities = 110/361 (30%), Positives = 194/361 (53%), Gaps = 27/361 (7%) Query: 7 KVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYCTAAADLADAQAVCDKLG 66 K++V MSGGVDS+++A LQ+ G++V+G +M ++ E ++ + V + LG Sbjct: 2 KIMVAMSGGVDSTMTAKFLQEAGHEVQGCYMMLHQKPGYHE-----ENIRKVKKVGEYLG 56 Query: 67 IELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGADYIAT 126 I++H ++ ++ + V++ F+ YK G+TPNP LCNK IK A L+FA + G + +AT Sbjct: 57 IKVHILDLQDKFNEYVYDPFVRLYKEGKTPNPCALCNKFIKLGALLDFA-KVNGCEKLAT 115 Query: 127 GHYVRRADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQVRKIAEDLG 186 GHYV+ D + D +KDQSYFL + E + +FP+G+ K ++++A + Sbjct: 116 GHYVQVVD----GFITCAKDPSKDQSYFLAQVPKEVLKDVIFPLGDKFKKDIKELARGVK 171 Query: 187 LVT--AKKKDSTGICFIGERKFREFLGRYLPAQ-PGKIITVDGDEIGEHQGLMYHTLGQR 243 ++ A + +S+ ICF+ E + E L ++ PG ++ DG+ IG HQG M++T+G+R Sbjct: 172 VLEEFATQAESSEICFV-ENTYIEVLNKHYNTNLPGNVVDKDGNIIGRHQGYMHYTIGKR 230 Query: 244 KGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLH-WVDREPFTG 302 +G + G EP +V+ + E N +VV + L + + ++ ++D + F Sbjct: 231 RGFEVF----GAHEPHFVIKINAEKNEIVVGTKDD---LAQKVVELENVNLFIDEDKF-- 281 Query: 303 TMRCTVKTRYRQTDIPCTVKALDDD-RIEVIFDEPVAAVTPGQSAVFYNGEVCLGGGIIE 361 C K RYR + V+ ++ ++ V GQ V Y+G+ + G I+ Sbjct: 282 --ECETKIRYRSPKLEAFVEVDKSSKTAKLTLNQNALGVAQGQLCVMYDGDRVIASGFIK 339 Query: 362 Q 362 Sbjct: 340 N 340 >UniRef50_A7I2L9 tRNA-specific 2-thiouridylase mnmA n=19 Tax=Campylobacter RepID=MNMA_CAMHC Length = 368 Score = 352 bits (903), Expect = 1e-95, Method: Composition-based stats. Identities = 122/386 (31%), Positives = 183/386 (47%), Gaps = 52/386 (13%) Query: 7 KVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYCTAAADLADAQAVCDKLG 66 K++V +SGGVDS+VSA +L+ GY++EG +MK DD A ++ Q V + L Sbjct: 2 KILVALSGGVDSAVSAKILKDAGYEIEGCYMKLHGRDDYH-----AKNIEKVQDVGNFLE 56 Query: 67 IELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGADYIAT 126 I+ H ++ ++ VFE FL YK G+TPNP LCN+ IKF FL+FA G D IAT Sbjct: 57 IKTHILDLCDDFKREVFEPFLQTYKVGKTPNPCALCNRTIKFGKFLDFARSK-GCDKIAT 115 Query: 127 GHYVRRADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQVRKIAEDLG 186 GHY + + + +D +KDQSYFL + I +FP+G + K V+K A Sbjct: 116 GHYAKIENN----LIKSAVDLSKDQSYFLANIEPRVIPNIVFPLGNMLKKDVKKFAAS-- 169 Query: 187 LVTAKK----KDSTGICFIGERKFREFLGR-YLPAQPGKIITVDGDEIGEHQGLMYHTLG 241 +K +S ICF+ E + + L Y PG + + G+ +G+H G M T+G Sbjct: 170 FPELEKISKSSESNEICFV-ENTYIDVLREFYKTETPGIVRNLQGEIVGKHNGYMNFTVG 228 Query: 242 QRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLH-WVDREPF 300 +R+G + G EP YVV D + N +VV + L Q + +++ + Sbjct: 229 KRRGFDVF----GAHEPHYVVKIDAKKNEIVVGSKAD---LDKNEFETQNFNAFLNIDEI 281 Query: 301 TGTMRCTVKTRYRQTDIPCTVKALDDD-------------------------RIEVIFDE 335 VK RYR I C ++ +D + ++I Sbjct: 282 LKMDEIYVKIRYRSAKIACKIEISLNDNLNNESLTDKNLNFENSDFLNNQDLKAKIILKT 341 Query: 336 PVAAVTPGQSAVFYNG-EVCLGGGII 360 P V GQ AVFY+ + + G I Sbjct: 342 PANGVASGQLAVFYDKSDCVIASGFI 367 >UniRef50_Q8R5Z5 tRNA-specific 2-thiouridylase mnmA 2 n=12 Tax=Fusobacterium RepID=MNMA2_FUSNN Length = 343 Score = 352 bits (903), Expect = 1e-95, Method: Composition-based stats. Identities = 122/360 (33%), Positives = 192/360 (53%), Gaps = 22/360 (6%) Query: 6 KKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYCTAAADLADAQAVCDKL 65 KKV++GMSGGVDSSVSA+LL++QGY+V G+ + E++ D+ D + VCDKL Sbjct: 2 KKVVIGMSGGVDSSVSAYLLKEQGYEVIGITLNQHLEENS-------KDIEDTKKVCDKL 54 Query: 66 GIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGADYIA 125 GI VN ++ + V + FL Y +G+TP+P I+C+ EIKFK + A + A+Y+A Sbjct: 55 GIIHEVVNIRKDFENIVIKYFLEGYNSGKTPSPCIICDDEIKFKILFDIA-DKYNAEYVA 113 Query: 126 TGHYVRRA--DVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQVRKIAE 183 TGHY +V K L KDQSY LY LS +++ + +FP+ + K ++R+IA Sbjct: 114 TGHYTSVEYSEVFSKYLLKSVHSIIKDQSYMLYRLSPDKLERLIFPLKDYSKQEIREIAL 173 Query: 184 DLGLVTAKKKDSTGICFIGERKFREFLGRYLPAQ--PGKIITVDGDEIGEHQGLMYHTLG 241 + L KKDS G+CF E ++EFL L + G I +G+ +G+H+G +T+G Sbjct: 174 KIDLEVHDKKDSQGVCFAKEG-YKEFLKENLRDEIVRGNFIDKNGNILGQHEGYQLYTIG 232 Query: 242 QRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLHWVDREPFT 301 QR+GLGI +K P ++ + + N +V+ + E L + + Sbjct: 233 QRRGLGINLSK-----PVFITEIKAQTNDIVLGEFSE---LFIDKVELINSKFSVEYEKL 284 Query: 302 GTMRCTVKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTPGQSAVFYNGEVCLGGGIIE 361 + + R+ T + D ++I ++E A GQ VF+ +GGG I+ Sbjct: 285 ENLELLARPRFSSTGFYGKLIK-DKNKIYFKYNEENAHNAKGQHIVFFYDGFVVGGGEIK 343 >UniRef50_B7G4M7 Predicted protein (Fragment) n=1 Tax=Phaeodactylum tricornutum CCAP 1055/1 RepID=B7G4M7_PHATR Length = 394 Score = 349 bits (896), Expect = 1e-94, Method: Composition-based stats. Identities = 130/384 (33%), Positives = 191/384 (49%), Gaps = 47/384 (12%) Query: 7 KVIVGMSGGVDSSVSAWLLQQQ---------GYQVE-GLFMKNWE----EDDGEEYCTAA 52 +V++ +SGGVDS+V+A LLQ+ G V + M NW +DD CT+ Sbjct: 1 RVVLALSGGVDSAVAAALLQETYGSSNNSDIGSAVLQTVHMSNWNSNTQDDDSIASCTSE 60 Query: 53 ADLADAQAVCDKLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFL 112 D DA AV + L + L +F EYW+ VFE ++ + G NPDI CN +KF A Sbjct: 61 QDWKDATAVAEHLRLNLTRQHFEREYWNQVFEPYVNDILRGTMGNPDIGCNVHVKFGALR 120 Query: 113 EFAAEDL--GADYIATGHYVRRAD--VDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLF 168 EFA L G D + HY LL D +KDQSYFL + Q++ LF Sbjct: 121 EFADWVLRWGWDQPPSPHYSHHNHQYQTPPPLLLAAADPSKDQSYFLSACAGYQLSNVLF 180 Query: 169 PVGELEKPQ---------VRKIAEDLGLVTAKKKDSTGICFIGER--KFREFLGRYL--P 215 P+GE K + VR++A+D L A K++S GICF+G+R F +FL YL P Sbjct: 181 PLGEYYKKENPSNDGKPTVRQLAKDYNLPNANKRESMGICFVGKRQSGFGDFLHEYLPHP 240 Query: 216 AQPGKIITVDGDEI-----GEHQGLMYHTLGQRKGLGIGGTKEGTEEPWYVVDKDVENNI 270 +P + + VD + ++ + +T+GQ + G E ++VVD DV N Sbjct: 241 LRPLQFVDVDTGAVLPAPTPKNAHAVLYTIGQGAKIS------GASEKYFVVDSDVAQNR 294 Query: 271 LVVAQGHEHPRLMSVGLIAQQLHWVDREPF-----TGTMRCTVKTRYRQTDIPCTVKALD 325 ++V G HP L + L+ + ++W E G +R + R+ Q I C ++ Sbjct: 295 VLVCAGTHHPALYADSLVLETVYWTAGEMPGPLQKRGRLRLQCRIRHLQPLIDCELRVEL 354 Query: 326 DDRIEVIFDEPVAAVTPGQSAVFY 349 D + V FD+ V +TPGQ+A FY Sbjct: 355 DGSLTVYFDKAVRGITPGQTAAFY 378 >UniRef50_C1EG18 Predicted protein (Fragment) n=2 Tax=Micromonas RepID=C1EG18_9CHLO Length = 346 Score = 348 bits (894), Expect = 2e-94, Method: Composition-based stats. Identities = 135/350 (38%), Positives = 191/350 (54%), Gaps = 43/350 (12%) Query: 7 KVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEY-CTAAADLADAQAVCDKL 65 +V VG+SGGVDS+V+AWLL+ G+ V G+ M+NW+E + C+ D DA+A + Sbjct: 3 RVAVGLSGGVDSAVTAWLLKSAGFDVTGVLMRNWDEAEETGGECSFEKDQRDARAAARAV 62 Query: 66 GIELHTVNFAAEYWDNVFELFLAEY-KAGRTPNPDILCNKEIKFKAFLEFAAEDLGADYI 124 GI L V+F EYW +VFE FL ++ G TPNPD+ CN+ IKF A L+ LGAD + Sbjct: 63 GIPLTEVDFVKEYWHSVFEPFLRDFDGGGATPNPDLACNRHIKFGALLDHCLRSLGADLL 122 Query: 125 ATGHYVRRADVD--GKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQVRKIA 182 ATGHY R +D RLLRG+D +KDQSYFL ++ E + ++ FP+G L K +VR++A Sbjct: 123 ATGHYARIVRIDETNPPRLLRGIDPDKDQSYFLASVRGESLERACFPLGGLTKREVRELA 182 Query: 183 ---EDLGLVTAKKKDSTGICFIG-ERKFREFLGRYLPAQ--------------------- 217 +L +++ S GICFIG +R F +F+ YLPA+ Sbjct: 183 AGPANLPAAVTRRRSSAGICFIGRKRDFGDFIQEYLPAEGEMRADSSRGDRRGEDSSRGA 242 Query: 218 PGKIITVD-GDEIGEHQGLMYHTLGQRKGLGIGGTKEGTEEPWYVVDKDVE--NNILVVA 274 G ++V+ G+ +G H GL +T GQR LG G PWYVV KD +N + VA Sbjct: 243 SGSFVSVESGEAVGRHGGLARYTCGQRARLG------GASVPWYVVGKDSRGGSNSVYVA 296 Query: 275 QGHEHPRLMSVGLIAQQLHWVDREPFTGT-----MRCTVKTRYRQTDIPC 319 G +HP L + + WV G + + +TRY + C Sbjct: 297 PGADHPALFTTSAAITRCFWVSGARPRGMDTDRGAKLSAQTRYGARAVSC 346 >UniRef50_Q1MRW7 tRNA-specific 2-thiouridylase mnmA n=1 Tax=Lawsonia intracellularis PHE/MN1-00 RepID=MNMA_LAWIP Length = 352 Score = 348 bits (894), Expect = 2e-94, Method: Composition-based stats. Identities = 115/367 (31%), Positives = 183/367 (49%), Gaps = 27/367 (7%) Query: 8 VIVGMSGGVDSSVSAWLLQQQ--GYQVEGLFMKNWEEDDGEEYCTAAADLADAQAVCDKL 65 V V +SGG DS + L++ + V L + E+ + + + C L Sbjct: 3 VAVAVSGGTDSLYTLATLREAFGNHHVFALHARFKEQITNDP-------VPALKEQCHNL 55 Query: 66 GIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGADYIA 125 + LH V+ E+ + + F+ Y G+TPNP + CN ++KF L+ A++LGA+ IA Sbjct: 56 NVPLHVVDLHKEFNELIIRPFIKAYADGKTPNPCVHCNAKVKFG-LLQKKAQELGANQIA 114 Query: 126 TGHYVRRADVDGKSR-LLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQVRKIAED 184 TGHYV D D + L G DS KDQSYFL EQ+ ++FP+G L K +VR+ + Sbjct: 115 TGHYVSLIDHDLYGKALKCGADSTKDQSYFLALTPREQLQTAIFPLGTLRKTEVRERLQK 174 Query: 185 LGLVTAKKKDSTGICFIGERKFREFLG--RYLPAQPGKIITVDGDEIGEHQGLMYHTLGQ 242 +GL K+S ICF+ +R+FL G+++ +DG +G+H+GL +T GQ Sbjct: 175 MGLEVPLPKESQEICFVPNDDYRKFLQSSDVDLLSEGRMVMLDGTLVGKHKGLWKYTEGQ 234 Query: 243 RKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLHWVDREPFTG 302 R+GLG+ EP YV K+ N LV+ + ++ AQ ++++ + Sbjct: 235 RRGLGVS-----WSEPLYVAHKNHSCNELVLGTAKD---ILVDTCTAQDINFLVPQD-NW 285 Query: 303 TMRCTVKTRYRQTDIPCTVKALDDD----RIEVIFDEPVAAVTPGQSAVFYNG-EVCLGG 357 V+TRYRQ +P ++ + + +I + F P PGQ A ++ L G Sbjct: 286 PKELFVRTRYRQQAVPADIQFVTNTSSSKKITIHFHSPQLPAAPGQLAAIFDKSGYVLAG 345 Query: 358 GIIEQRL 364 G+I L Sbjct: 346 GLITNDL 352 >UniRef50_C9M7Q8 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase n=1 Tax=Jonquetella anthropi E3_33 E1 RepID=C9M7Q8_9BACT Length = 344 Score = 348 bits (893), Expect = 2e-94, Method: Composition-based stats. Identities = 139/370 (37%), Positives = 197/370 (53%), Gaps = 35/370 (9%) Query: 1 MSETAKKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYCTAAADLADAQA 60 MSE+ V+VG+SGGVDS S L+ GYQV +F+K ++ AD D Q Sbjct: 1 MSES---VLVGVSGGVDSICSCLKLRDLGYQVAPVFLKMKDQ----------ADERDVQR 47 Query: 61 VCDK---LGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAE 117 + G+ + TV+ + V E FL E AGRTPNP ++CN+ +K + E A Sbjct: 48 IARFEEVTGLTVETVDCRELFRQRVIEPFLQELTAGRTPNPCVICNQFLKVRLLFEEADR 107 Query: 118 D-LGADYIATGHYVRRADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKP 176 +GA +ATGHY + DG RL RG S KDQSY LY L + + +FP+ EK Sbjct: 108 RQIGA--VATGHYAKILQKDGLCRLARGA-SAKDQSYMLYRLPQAYLERLVFPLENSEKG 164 Query: 177 QVRKIAEDLGLVTAKKKDSTGICFIGERKFREFLGRYLPA---QPGKIITVDGDEIGEHQ 233 QVR++A + + DS ICF+G FL ++ QPG++++ G +G H+ Sbjct: 165 QVRRLAREALGGSFGDGDSQDICFLGSLGLNAFLASHVTGAAIQPGQMVSDSGQVLGRHR 224 Query: 234 GLMYHTLGQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLH 293 GL ++T+GQRKGLG+GG PWYV +K ++ L+++ R +I + Sbjct: 225 GLAHYTVGQRKGLGLGGG------PWYVTEKRLDERQLILSHVERPER----RIILKDPV 274 Query: 294 WVDREPFTGTMRCTVKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTPGQSAVFYNGEV 353 W T V+TRYR PCT++ D+ R V+ D P A PGQSAV Y+GE+ Sbjct: 275 WHVL--PDETKSYLVQTRYRSHPKPCTLRRTDEGRWAVLLDAPSGASAPGQSAVVYDGEL 332 Query: 354 CLGGGIIEQR 363 +GGGII Q Sbjct: 333 VVGGGIIHQS 342 >UniRef50_D2L5P8 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase n=1 Tax=Desulfovibrio sp. FW1012B RepID=D2L5P8_9DELT Length = 357 Score = 345 bits (886), Expect = 1e-93, Method: Composition-based stats. Identities = 123/366 (33%), Positives = 177/366 (48%), Gaps = 19/366 (5%) Query: 7 KVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYCTAAADLADAQAVCDKLG 66 ++ V +SGG DS +S LL+ +G+ V + D + A + C +LG Sbjct: 2 RLAVAVSGGADSLLSLGLLRAEGHDVVAVHAHFLPPDMKGQELARAIETQ-----CGRLG 56 Query: 67 IELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGADYIAT 126 + V+ + E+ V F+A Y AG+TPNP CN+++KF +E AA +LGAD +AT Sbjct: 57 VPFAAVDLSREFGRQVVAPFIAAYAAGQTPNPCAACNRDMKFGLLME-AARELGADKLAT 115 Query: 127 GHYVRRADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQVRKIAEDLG 186 GH+ R + D L RG D ++DQSYFL + + +A+++FP+ K LG Sbjct: 116 GHFARLQETDRGPALFRGADDSRDQSYFLSLVPRDALARAVFPLARRRKADHPAALAALG 175 Query: 187 LVTAKKKDSTGICFIGERKFREFLGRYLPA--QPGKIITVDGDEIGEHQGLMYHTLGQRK 244 L K+S +CF+ +R FL A PG I+ DG +G HQGL HT+GQRK Sbjct: 176 LAPPLPKESREVCFVPGDDYRAFLEASGAALTGPGPIVLTDGTRLGTHQGLWRHTIGQRK 235 Query: 245 GLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLHWVDREP-FTGT 303 GLGI +P YV+ KD N LVV + L + + + + T Sbjct: 236 GLGI-----AYADPLYVLGKDTAANTLVVGVRAD---LDATACRTGPANLLADPAGWPAT 287 Query: 304 MRCTVKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTPGQSAVFYN-GEVCLGGGI-IE 361 +T YR P D + + FD PVA TPGQ A Y+ L GG+ + Sbjct: 288 ATVLAQTCYRMRPRPARAVLGPDGGLALTFDAPVARPTPGQVATVYDAAGRVLAGGVLVP 347 Query: 362 QRLPLP 367 LP P Sbjct: 348 DTLPSP 353 >UniRef50_UPI0001C3185B tRNA(5-methylaminomethyl-2-thiouridylate)-methyl transferase n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C3185B Length = 519 Score = 345 bits (885), Expect = 2e-93, Method: Composition-based stats. Identities = 125/382 (32%), Positives = 190/382 (49%), Gaps = 38/382 (9%) Query: 7 KVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNW--EEDDGEEYCTAAADLADAQAVCDK 64 + +V MSGGVDS+V+A L ++ V + ++ W E++DGE C +A + A+A+ + Sbjct: 144 RTLVAMSGGVDSAVAALLAARESGDVVAVTLELWADEQNDGERSCCSAQAVRFARALAHR 203 Query: 65 LGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGADYI 124 +G+ T++ E+ V FL ++ AG TPNP + CN ++ A LE A + LGA + Sbjct: 204 MGLPHLTLDLREEFSAGVVTPFLDDHAAGLTPNPCVRCNGHVRLDAMLELA-DRLGAATL 262 Query: 125 ATGHYVRRADVDG-----------------KSRLLRGLDSNKDQSYFLYTLSHEQIAQSL 167 ATGHY R + L D+ KDQ+Y L L+ +A+ Sbjct: 263 ATGHYARVEPAEPVEPAAAPAEHAAAPAEHGPLLRAAADAWKDQTYMLAALAPASLARLR 322 Query: 168 FPVGELEKPQVRKIAEDLGLVTAKKKDSTGICFIGERKFREFLGRY--LPAQPGKIITVD 225 FP+G+L KPQVR +A + L A K +S +CF+ EFL R+ + +PG+++ Sbjct: 323 FPLGDLTKPQVRALAAEAELPVASKAESQDLCFLAGTSRSEFLARHAGIAQRPGEVVDAA 382 Query: 226 GDEIGEHQGLMYHTLGQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSV 285 GD IG H G T+GQR+GLG+ EEP YV+ D +N +V + SV Sbjct: 383 GDVIGAHTGHHGFTVGQRRGLGVAA-----EEPLYVLRTDPASNRVVAGTRAQL-ATTSV 436 Query: 286 GLIAQQLHWVDREPFTGTMRCTVKTRYRQTDIPCTVKALD----DDRIEVIFDEPVAAVT 341 + +LH G VK RYR +P V R+E+ +EPV Sbjct: 437 PVRGARLH------RDGARVDRVKLRYRAKPLPARVVGAPAAGTHRRLEIALEEPVDGAA 490 Query: 342 PGQSAVFYNGEVCLGGGIIEQR 363 PGQ A +G+V +G I++ Sbjct: 491 PGQLACLMDGDVVIGWATIDRP 512 >UniRef50_B6WY81 Putative uncharacterized protein n=1 Tax=Desulfovibrio piger ATCC 29098 RepID=B6WY81_9DELT Length = 387 Score = 345 bits (885), Expect = 2e-93, Method: Composition-based stats. Identities = 124/392 (31%), Positives = 173/392 (44%), Gaps = 49/392 (12%) Query: 9 IVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYCTAAA--------------- 53 V +SGGVDS + L++QG+ V L + C A Sbjct: 5 AVAVSGGVDSLCALLRLREQGHDVLALHGLFLPDAASSGPCPAPEGPRLLTAAEALAAPL 64 Query: 54 ------DLADAQAVCDKLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIK 107 + Q C +LGI LH + A + V F+ Y GRTPNP LCN+ IK Sbjct: 65 PPASRQAVEGLQTACGQLGIPLHVADMRAVFDREVVTPFVRAYARGRTPNPCALCNRAIK 124 Query: 108 FKAFLEFAAEDLGADYIATGHYVRRADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSL 167 F A L+ A LGAD IATGHY R D L D KDQSYFL + E++ +++ Sbjct: 125 FGALLDTAL-SLGADRIATGHYARLLDGPSGPMLAAADDLAKDQSYFLSLVPLERLRRAI 183 Query: 168 FPVGELEKPQVRKIAEDLGLVTAKKKDSTGICFI--GERKFREFLGRYLPAQ------PG 219 FP+ +K ++ GL ++S ICFI GE +R FL R A+ G Sbjct: 184 FPLARQDKATSIAQVKEAGLAVPVPQESQEICFIPAGEDAYRAFLERRWQAEGLSLPGSG 243 Query: 220 KIITV----DG----DEIGEHQGLMYHTLGQRKGLGIGGTKEGTEEPWYVVDKDVENNIL 271 ++ DG + H+GL +T GQR+GLGI + EP YV+ K E+N L Sbjct: 244 PVLLEEAGSDGRPVLRPLARHEGLWRYTEGQRRGLGIAHS-----EPLYVLRKQGEDNTL 298 Query: 272 VVAQGHEHPRLMSVGLIAQQLHWVDREPFTGTMRCTVKTRYRQTDIPCTVKALDDDRIEV 331 VV RL G + ++ + P + R+RQ P V+ DD + V Sbjct: 299 VVGGRA---RLGMHGCLTGPVNLLC-PPEQWPDILLARLRHRQRPTPAQVELTDDG-LRV 353 Query: 332 IFDEPVAAVTPGQSAVFYNGE-VCLGGGIIEQ 362 EP PGQ A Y+ + L G ++ + Sbjct: 354 TLAEPQFPSAPGQVAAIYDEQGRVLAGALVRE 385 >UniRef50_C1FJ72 Predicted protein n=1 Tax=Micromonas sp. RCC299 RepID=C1FJ72_9CHLO Length = 478 Score = 344 bits (882), Expect = 4e-93, Method: Composition-based stats. Identities = 132/437 (30%), Positives = 194/437 (44%), Gaps = 86/437 (19%) Query: 4 TAKKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDD---GEEYCTAAADLADAQA 60 KV V +SGGVDSSV+ LL+ G+ +++ W +D + C DL A+ Sbjct: 14 RKLKVAVLLSGGVDSSVALTLLKAAGHDCVAFYLQIWFVEDFRNTWDACPWEDDLNVARG 73 Query: 61 VCDKLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLG 120 VC+ L + L V +YWD V + + + GRTPNPD+LCN +KF AF ++ + Sbjct: 74 VCEHLDVPLEVVPLTNQYWDLVVKHSIEQISRGRTPNPDMLCNSRVKFGAFTDWLETNRA 133 Query: 121 ADY--IATGHYVRRADVDG-------------------KSRLLRGLDSNKDQSYFLYTLS 159 ++ +A+GHY V G RL+ D+ KDQ+YFL LS Sbjct: 134 GEFHRVASGHYAAMDRVQGILADTLHGDDGMNGTSRRHPCRLIMSGDARKDQTYFLAHLS 193 Query: 160 HEQIAQSLFPVGELEKPQVRKIAEDLGLVTAKKKDSTGICFIGERKFREFLGRYLPAQPG 219 Q+A FP+G L K Q+R+IA GL A++KDS GICF+G+ KF EF+ +L +PG Sbjct: 194 QRQLAALTFPIGGLPKTQIREIARSAGLPNAERKDSQGICFLGKVKFSEFVAEHLGERPG 253 Query: 220 KIITVD-GDEIGEHQGLMYHTLGQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHE 278 I+ ++ G +G H G +HT+GQR GLG+ G PWYV KDV N++ V + + Sbjct: 254 AIVELETGTRLGTHSGFWFHTIGQRSGLGLSGG------PWYVAAKDVPGNVVYVTRDYY 307 Query: 279 HPRLMSVGLIAQQLHWVDREPFTGTMRCTV----------------------------KT 310 + W+ T Sbjct: 308 SVDKERNTFRVGEFSWLSGTAPASDADGYALGHGGEGARLAWACDGDGCDDDGATSRETT 367 Query: 311 RYRQ---------------TDIPCTVKALDDD-RIEVIFD-----------EPVAAVTPG 343 R +++ C V+ ++ R + FD + G Sbjct: 368 SSRGVNGGASASEVDATKTSELYCKVRHGENRYRCTLRFDIDGDAGTVVIEADDQGLAAG 427 Query: 344 QSAVFYNGEVCLGGGII 360 Q AVFY+ VCLG G+I Sbjct: 428 QFAVFYDRRVCLGCGVI 444 >UniRef50_C0A9P4 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase (Fragment) n=1 Tax=Opitutaceae bacterium TAV2 RepID=C0A9P4_9BACT Length = 369 Score = 342 bits (877), Expect = 1e-92, Method: Composition-based stats. Identities = 130/370 (35%), Positives = 172/370 (46%), Gaps = 63/370 (17%) Query: 50 TAAADLADAQAVCDKLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFK 109 D+ DA+ V D+LGI VN EY D V L Y+ G TPNPDI+CN+EIKF Sbjct: 1 PWQQDIEDARRVADQLGIPFRVVNLMDEYRDRVVAYLLDGYRRGLTPNPDIMCNREIKFG 60 Query: 110 AFLEFAAEDLGADYIATGHYVRR------------------------------------- 132 F +A + G +ATGHY RR Sbjct: 61 VFRAWARDH-GFTAVATGHYARRVPLSAADTAPAACASTVGASLAKPASANNAQSAIVAP 119 Query: 133 ---------ADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQVRKIAE 183 A L G D NKDQSYFL L+ Q+A + FP+G++EKP++R++A Sbjct: 120 SGCAGFASEAPAPSAWALHEGADPNKDQSYFLALLTQAQLADARFPIGDIEKPELRRLAR 179 Query: 184 DLGLVTAKKKDSTGICFIGERKFREFLGRYLPAQPGKII-TVDGDEIGEHQGLMYHTLGQ 242 + GL TA KKDS GICFIG+ K ++FL +Y+P PG I+ D IGEH+GL Y TLGQ Sbjct: 180 EAGLATADKKDSQGICFIGQVKMQDFLRQYVPDNPGPIVRATDQRIIGEHRGLHYFTLGQ 239 Query: 243 RKGLGIGGTKEGTEEPWYVVDKDVENNILVVA-QGHEHPRLMSVGLIAQQLHW--VDREP 299 RKG+G+ + + + V K ++N L VA G + P L + L W D P Sbjct: 240 RKGIGVPSNTD--NKAYVVTGKRSDDNTLFVAFDGADAPGLFQTEVRVHSLQWNTPDGAP 297 Query: 300 F-------TGTMRCTVKTRYRQTDIPCTVKALDD---DRIEVIFDEPVAAVTPGQSAVFY 349 G + RYR IP T+ D + F+ P + GQ Y Sbjct: 298 PAFLTSGGPGPHALEGRVRYRDPRIPLTITLTPDLAPATAHIRFETPQRGLASGQILALY 357 Query: 350 NGEVCLGGGI 359 G LGG + Sbjct: 358 AGPRLLGGAV 367 >UniRef50_C1TMD1 Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase with PP-loop ATPase domain n=1 Tax=Dethiosulfovibrio peptidovorans DSM 11002 RepID=C1TMD1_9BACT Length = 349 Score = 342 bits (877), Expect = 2e-92, Method: Composition-based stats. Identities = 126/364 (34%), Positives = 184/364 (50%), Gaps = 24/364 (6%) Query: 2 SETAKKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYCTAAADLADAQAV 61 S T ++V++G+SGGVDS +A LL++ GY+ G+ + E++D D A + + Sbjct: 3 STTDRRVLLGVSGGVDSCAAALLLRRSGYEPIGVRLILKEKED-------RLDEARLKGL 55 Query: 62 CDKLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGA 121 + LGI + ++ + +V E FL Y+ TPNP +LCN+ +KF+ E A G Sbjct: 56 -NSLGIPVVEIDGRKAFRSSVVEPFLEAYERSITPNPCVLCNERVKFRLLFEEADRR-GI 113 Query: 122 DYIATGHYVRRADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQVRKI 181 + TGHY G S + R KDQSY LY L E + + +FP+ L KP+VR + Sbjct: 114 HTVGTGHYAGTTPYRGGSAISRAEIGGKDQSYMLYRLPSEWLDRLIFPLENLSKPEVRDL 173 Query: 182 A-EDLGLVTAKKKDSTGICFIGERKFREFLGRYL--PAQPGKIITVDGDEIGEHQGLMYH 238 + K DS ICFI FL L A PG +I++DGD +G H+GL + Sbjct: 174 VFREFDDEELKSGDSQDICFIP-GSLDSFLDENLREEAGPGPMISLDGDVLGRHRGLCRY 232 Query: 239 TLGQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLHWVDRE 298 T GQRKGLG+GG PW+VV KD N L++ + + V + L W + Sbjct: 233 TEGQRKGLGLGGG------PWFVVRKDRSENALILGRETDTSV---VRIGFSMLKW--QH 281 Query: 299 PFTGTMRCTVKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTPGQSAVFYNGEVCLGGG 358 + RYR IP V L+ EV+ ++ V GQS V Y+G LGGG Sbjct: 282 KVNEGSVYLAQHRYRSAPIPAVVSRLNQGSAEVLLEKSARGVALGQSLVLYDGPCLLGGG 341 Query: 359 IIEQ 362 +I++ Sbjct: 342 VIDR 345 >UniRef50_D1B719 tRNA(5-methylaminomethyl-2-thiouridylate)-methyl transferase n=1 Tax=Thermanaerovibrio acidaminovorans DSM 6589 RepID=D1B719_THEAS Length = 346 Score = 341 bits (876), Expect = 2e-92, Method: Composition-based stats. Identities = 121/355 (34%), Positives = 177/355 (49%), Gaps = 21/355 (5%) Query: 9 IVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYCTAAADLADAQAVCDKLGIE 68 V MSGGVDSSV+A +L+ +G++ G+ + + A+ + LGI Sbjct: 7 AVLMSGGVDSSVTAMILKGEGHRPLGVTLLMSPSSSECSR-----SVQLARRTAEILGIR 61 Query: 69 LHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGADYI--AT 126 ++ + +V + F EY AGRTPNP CN+ +K E + +G D I AT Sbjct: 62 HTVLDLRDLFRRHVMDKFRTEYMAGRTPNPCSDCNRNVKLGGLAERL-DRMGLDGIPMAT 120 Query: 127 GHYVRRADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQVRKIAEDLG 186 GHY R + L GLD +DQSYFL + I + +FP+G + K QVR +AE+ Sbjct: 121 GHYARILKDPAGAHLAMGLDHRRDQSYFLAEVPKGIIRRLMFPLGGMTKEQVRLLAEEAR 180 Query: 187 LVTAKKKDSTGICFIGERKFREFLGRYLPAQPGKIITVDGDEIGEHQGLMYHTLGQRKGL 246 L ++ DS CF+ + +RE +G + +Q G I+ + G+ +G HQG T+GQRKGL Sbjct: 181 LPARREADSMDSCFVEDGDYREVIGPVIDSQ-GPIVDLRGNVLGIHQGFHRFTVGQRKGL 239 Query: 247 GIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLHWVDREPFTGTMRC 306 G+ T E YV D +VVA RLM + A +W++ + Sbjct: 240 GVSST-----EALYVKRIDPPT--VVVAPR---DRLMERHVTASGGNWLEEGDLRCGAQL 289 Query: 307 TVKTRYRQTDIPCTVKALDDDRIEVIFD-EPVAAVTPGQSAVFYNGE-VCLGGGI 359 KTR + PCTV+ ++ DRI V+F E V A PGQ V Y + V +G Sbjct: 290 LGKTRSQGRPSPCTVEEVEGDRIRVLFHGEGVFAPCPGQRLVLYRPDGVVVGCAT 344 >UniRef50_C6BSG5 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase n=2 Tax=Desulfovibrio RepID=C6BSG5_DESAD Length = 360 Score = 339 bits (871), Expect = 7e-92, Method: Composition-based stats. Identities = 125/361 (34%), Positives = 184/361 (50%), Gaps = 21/361 (5%) Query: 6 KKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYCTAAADLADAQAVCDKL 65 +KV + +SGG DS +S LL++ G + + ++ A +A + C +L Sbjct: 17 RKVAMAVSGGADSLLSMVLLKESGADIVAVHGCFLGKEK------AEVAVAGLEKRCAEL 70 Query: 66 GIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGADYIA 125 + LH + AE+ V E F+ EY G TPNP LCN EIKF + AA++LG D + Sbjct: 71 DVSLHVFDLTAEFDRLVVEPFVQEYLRGNTPNPCALCNPEIKFGVLYK-AAQELGCDLLG 129 Query: 126 TGHYVRRADVDGKSR-LLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQVRKIAED 184 TGHYVR A+ R L RG D KDQSYFL + + + ++FP+G K Q + Sbjct: 130 TGHYVRIAEDARYGRVLARGADMGKDQSYFLSLVPRDSVLNAIFPLGGHSKDQTYAELDK 189 Query: 185 LGLVTAKKKDSTGICFIGERKFREFL--GRYLPAQPGKIITVDGDEIGEHQGLMYHTLGQ 242 G+ +S ICF+ + +R+FL + PG + DG ++G+H GL +T GQ Sbjct: 190 RGVEIPLPSESQEICFVPDDDYRQFLIDRKVKLPGPGIAVLSDGTKVGKHNGLWRYTQGQ 249 Query: 243 RKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLHWVDREPFTG 302 R+GLGI + P YV+DKD++ N+L+V E L + G IA +++ + Sbjct: 250 RRGLGIS-----WKAPLYVLDKDMKRNLLIVGTSDE---LEAGGCIADSFNFL-IDFERW 300 Query: 303 TMRCTVKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTPGQSAVFYNGE-VCLGGGIIE 361 ++TRYRQ P + I+ F EP + TPGQ Y E LGGGII Sbjct: 301 PETVYIQTRYRQRSKPARAVQVG-SSIKFDFIEPHSRPTPGQIVAVYTEEGAVLGGGIIR 359 Query: 362 Q 362 + Sbjct: 360 E 360 >UniRef50_B6JVF0 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase n=1 Tax=Schizosaccharomyces japonicus yFS275 RepID=B6JVF0_SCHJY Length = 414 Score = 337 bits (866), Expect = 3e-91, Method: Composition-based stats. Identities = 115/401 (28%), Positives = 176/401 (43%), Gaps = 77/401 (19%) Query: 37 MKNWEEDDGEEYCTAAADLADAQAVCDKLGIELHTVNFAAEYWDNVFELFLAEYKAGRTP 96 M+NW ++ CT+ D + V +KLGI + +NF +YW VFE L Y+ G TP Sbjct: 1 MRNWLDESSPGGCTSERDWTLVKKVGEKLGIPVTRLNFEHDYWQRVFEPTLEHYRRGWTP 60 Query: 97 NPDILCNKEIKFKAFLEFA----AEDLGADYIATGHYVR--RADVDGKSRLLRGLDSNKD 150 NPD+LCN+E+KF A E A+ A ++ATGHY R A ++ LLR D+ KD Sbjct: 61 NPDVLCNREVKFGALFEHLSHVMADSKRAWWVATGHYARTCIARDTNETCLLRPTDAKKD 120 Query: 151 QSYFLYTLSHEQIAQSLFPVGELEKPQVRKIAEDLGL-VTAKKKDSTGICFIGERK---- 205 Q+ FL + ++ + +++FP+ + K QV++ A GL +A + +S G+CF+ R Sbjct: 121 QTLFLCNIPYQALQRTIFPLWQHTKEQVKREAMLHGLEESATRPESMGLCFVSPRNIRGH 180 Query: 206 FREFLGRYLPAQPGKI-ITVDGDEIG---EHQGLMYHTLGQRKGLGIGGTKEGTEEPWYV 261 FR FL YL + + G +G +G+ T+G++ GL + + ++ PWYV Sbjct: 181 FRNFLAEYLEPSSDPLRVMFRGVCVGVYPRDKGIWSFTVGEKCGLSLAALQRVSQLPWYV 240 Query: 262 VDKDVENNILVVAQGHEHPRLMSVGLIAQQLHWVDRE-----PFTGTMRCTVKTRYRQTD 316 KDV N + V G+ HP L S + W + CTV+ R++Q Sbjct: 241 WKKDVATNAVHVCPGYRHPLLFSRAATCSEWGWASPWCKRAFEGADDVACTVRIRHQQQP 300 Query: 317 ---------IPCTVK--------------------------------------------- 322 +PCT Sbjct: 301 GMSLGERYRVPCTAVDHAKRFSENPSRPSALNHFARQHCTTLRHICPTLPSRRVLTLQVP 360 Query: 323 ---ALDDDRIEVIFDEPVAAVTPGQSAVFYNGEVCLGGGII 360 D I + F +P + PGQ Y +C+GGG I Sbjct: 361 AHFRSRPDCIRLQFHQPQRGIAPGQHVAVYVDNLCVGGGPI 401 >UniRef50_D1Y320 tRNA methyl transferase n=1 Tax=Pyramidobacter piscolens W5455 RepID=D1Y320_9BACT Length = 346 Score = 337 bits (866), Expect = 3e-91, Method: Composition-based stats. Identities = 116/364 (31%), Positives = 187/364 (51%), Gaps = 29/364 (7%) Query: 5 AKKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYCTAAADLADAQAVCDK 64 ++K++VG+SGGVDS++SA L+ GY V + + +D D + + Sbjct: 2 SEKILVGVSGGVDSALSALRLRDLGYDVTAAHLILKDGED-------PTDRLRLERLARH 54 Query: 65 LGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGADYI 124 + +H ++ A + + V FL Y+ G TPNP ++CN +KF+A E A + LG D + Sbjct: 55 --VPVHELDCRARFCERVVRPFLDAYRKGLTPNPCVICNAALKFRALFELA-DRLGIDKV 111 Query: 125 ATGHYVRRADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVG-ELEKPQVR-KIA 182 ATGHY R + + R DS KDQ+Y L L HE +++ FP+ E K V+ ++A Sbjct: 112 ATGHYARVLKRGRRWAIAR-TDSPKDQTYMLCRLPHEWLSRLCFPLSEERSKTGVKNELA 170 Query: 183 EDLGLVTAKKKDSTGICFIGERKFREFLGRYLPAQP---GKIITVDGDEIGEHQGLMYHT 239 LG + DS GICF+ FL +L A+ G+++ DG+++G H+GL+++T Sbjct: 171 SRLGAERLAQGDSQGICFLEGGSLERFLEDHLAAEERHIGRMVGHDGEDLGPHKGLIFYT 230 Query: 240 LGQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLHWVDREP 299 GQR+GLG+ + PW+V +D +N L+++ G E + + W ++ Sbjct: 231 EGQRRGLGL------SRGPWFVARRDFASNRLLLSHGTEA---TVGTIYFENARW--QQE 279 Query: 300 FTGTMRCTVKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTPGQSAVFYN--GEVCLGG 357 C V+ YR +P + D V EP +V+ GQ+ V Y+ V LGG Sbjct: 280 VRAGQDCLVQYCYRARPVPGRLADCHDGGGTVELQEPAGSVSIGQALVLYDVAERVLLGG 339 Query: 358 GIIE 361 G I+ Sbjct: 340 GFIK 343 >UniRef50_UPI0001BC5A6B tRNA (5-methylaminomethyl-2-thiouridylate) -methyltransferase n=2 Tax=Fusobacterium RepID=UPI0001BC5A6B Length = 345 Score = 337 bits (866), Expect = 3e-91, Method: Composition-based stats. Identities = 117/361 (32%), Positives = 184/361 (50%), Gaps = 21/361 (5%) Query: 5 AKKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYCTAAADLADAQAVCDK 64 +KVI+GMSGGVDS+V+A+LLQ++GY+V + + +L D Q + DK Sbjct: 2 KEKVILGMSGGVDSAVAAYLLQKEGYEVIAVHFSVHNTE------ATQKELQDCQKIADK 55 Query: 65 LGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGADYI 124 + L++ + E+ + + +L+E G+TP+P LC+ IKF + A E A+Y+ Sbjct: 56 FSLTLYSYSLEKEFREKIISYYLSETGKGKTPSPCPLCDDSIKFHLLFQEA-EKRKANYV 114 Query: 125 ATGHYVRRADVD--GKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQVRKIA 182 ATGHY + + + L +KDQ Y LY LS +++ + LFP+ LEK +VR++A Sbjct: 115 ATGHYASISRNNICNTTLLEVKHHIHKDQCYMLYRLSPKKLNKILFPLASLEKAEVRELA 174 Query: 183 EDLGLVTAKKKDSTGICFIGERKFREFLGRYLPA--QPGKIITVDGDEIGEHQGLMYHTL 240 D+GL ++KKDS GICF E ++ FL ++L Q G I G+ +G+H G +TL Sbjct: 175 RDIGLFVSEKKDSQGICFAPEG-YQNFLKKHLAKKIQKGNFIDEKGNILGQHLGYPLYTL 233 Query: 241 GQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLHWVDREPF 300 GQR+GLGI T+E ++ D N + + LM + + Sbjct: 234 GQRRGLGI-----KTKEICFITKIDPGKNEITLG---NFESLMKDKVQLEDTVLHLPFER 285 Query: 301 TGTMRCTVKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTPGQSAVFYNGEVCLGGGII 360 M + R+ T +K ++ + + E A TPGQ V + +GGGII Sbjct: 286 LKDMELLARPRFSSTGFFGKLKE-EEGELTFHYFEKNAHNTPGQHLVLFYKNYVVGGGII 344 Query: 361 E 361 Sbjct: 345 R 345 >UniRef50_C2BUX5 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase n=3 Tax=Mobiluncus RepID=C2BUX5_9ACTO Length = 409 Score = 337 bits (865), Expect = 3e-91, Method: Composition-based stats. Identities = 130/402 (32%), Positives = 180/402 (44%), Gaps = 51/402 (12%) Query: 7 KVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEE----YCTAAADLADAQAVC 62 K++VG+SGGVDS+V+ LQ G++V G FM+ LADA V Sbjct: 8 KILVGLSGGVDSAVATARLQAAGHEVSGFFMQLESPSRPWSRPVTSAEPVDALADAHRVA 67 Query: 63 DKLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGAD 122 D LG+EL + A + V + F+ Y+ G TPNP + CN+ IKF +E A + G D Sbjct: 68 DFLGVELQVWDLAERFNRVVMDSFVQAYRDGLTPNPCVHCNRFIKFGYVIERARRE-GFD 126 Query: 123 YIATGHYVRRADVDGK------------------SRLLRGLDSNKDQSYFLYTLSHEQIA 164 Y+ATGHY R LLRG KDQSY L E +A Sbjct: 127 YVATGHYARLWRPGQVGLIPVGVPPTVAEGAFPDFALLRGSAIGKDQSYVLAGARAEALA 186 Query: 165 QSLFPVGELE-KPQVRKIAEDLGLVTAKKKDSTGICFIGERKFREFLGRYLPAQPGKIIT 223 +++FP+G++ K R AE LG+ A K+DS ICFI + R FL + A G+I+ Sbjct: 187 RAVFPLGDVTDKAATRAEAEALGIPVAGKRDSFDICFIPDGDTRGFLRGCIGAALGQIVD 246 Query: 224 VDGDEIGEHQGLMYHTLGQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLM 283 DG +G H G +T+GQR+GL I P YVV D E N + VA L Sbjct: 247 EDGAVVGSHDGAFQYTVGQRRGLHIP-RPHQDGAPRYVVGTDAETNTVFVAPRQ---ALT 302 Query: 284 SVGLIAQQ-LHWVDREPFTG----------TMRCTVKTR-YRQTDIPCTVKA---LDDDR 328 + A ++W+ G + T++ R + Q P V D + Sbjct: 303 VTEIQAGPAVNWLTDPTRLGLGATGEGELDPVGLTIQFRAHGQPVTPQAVHLESSTDGTK 362 Query: 329 IEVIFDEP---VAAVTPGQSAVFY----NGEVCLGGGIIEQR 363 ++V P V V PGQS V Y G+ + I Sbjct: 363 LQVAL-SPTAGVTGVAPGQSLVLYQDSSQGDRVIAQATITAT 403 >UniRef50_A9V8Y1 Predicted protein n=1 Tax=Monosiga brevicollis RepID=A9V8Y1_MONBE Length = 495 Score = 337 bits (864), Expect = 5e-91, Method: Composition-based stats. Identities = 115/302 (38%), Positives = 158/302 (52%), Gaps = 9/302 (2%) Query: 28 QGYQVEGLFMKNWEEDDGEEYCTAAADLADAQAVCDKLGIELHTVNFAAEYWDNVFELFL 87 G++V G+FM+ W+E D CTA D Q + +LGI V+F EYW +VF++ L Sbjct: 9 AGHEVTGVFMRTWDELDETGVCTAEGDWRHVQDIAQRLGIPCKRVDFVQEYWHSVFQVML 68 Query: 88 AEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGADYIATGHYVRRAD-VDGKSRLLRGLD 146 E AG TPNPDILCN+ IKF AF FA + LGAD +A GHY R + RLLRG D Sbjct: 69 DELAAGATPNPDILCNRHIKFDAFYHFARDQLGADRVAMGHYARVDEREPDMPRLLRGCD 128 Query: 147 SNKDQSYFLYTLSHEQIAQSLFPVGELEKPQVRKIAEDLGLV-TAKKKDSTGICFIGERK 205 NKDQSYFL L + + FP+G L K +V+ +A G A +++S G+CF+G+R+ Sbjct: 129 DNKDQSYFLAGLPVHVLRHAAFPLGHLTKDRVKALAAAAGFSDVAGQRESMGLCFVGKRR 188 Query: 206 FREFLGRYLPAQPGKIITVD-GDEIGEHQGLMYHTLGQRKGLGIGGTKEGTEEPWYVVDK 264 F + +YLP +PG + ++ G ++G L T GQ L +G YV K Sbjct: 189 FGALVQQYLPPRPGVFVHLESGRQLGPVTDLNVITFGQSARL------DGQPVRCYVAGK 242 Query: 265 DVENNILVVAQGHEHPRLMSVGLIAQQLHWVDREPFTGTMRCTVKTRYRQTDIPCTVKAL 324 D+ V +G HP L + +HW P V+ R+R PC V L Sbjct: 243 DMTAGAAYVVEGLHHPCLHARAFALSNVHWTHPPPQDVEANLHVRIRHRGQLHPCAVGPL 302 Query: 325 DD 326 Sbjct: 303 PG 304 >UniRef50_C7M0G9 tRNA(5-methylaminomethyl-2-thiouridylate)-methyl transferase n=1 Tax=Acidimicrobium ferrooxidans DSM 10331 RepID=C7M0G9_ACIFD Length = 341 Score = 332 bits (851), Expect = 2e-89, Method: Composition-based stats. Identities = 109/353 (30%), Positives = 165/353 (46%), Gaps = 21/353 (5%) Query: 7 KVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYCTAAADLADAQAVCDKLG 66 +V+V MSGGVDSSV+A + ++ G+ V G+ ++ E G+ C + D+ DA+ V LG Sbjct: 3 RVVVAMSGGVDSSVAALMAREAGHDVIGVTLRL-TEAAGDRGCCSVGDVEDARTVAALLG 61 Query: 67 IELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGADYIAT 126 I + AE+ V E +L ++ G TPNP + CN+ +K A +A + LGA + T Sbjct: 62 INHIVADMRAEFHRAVVEPYLDAHRRGWTPNPCMSCNRYVKVTALAAWA-QRLGASRLVT 120 Query: 127 GHYVRRADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQVRKIAEDLG 186 GHY D + L+RG D KDQSY L + E +A+ P+GEL K +VR A G Sbjct: 121 GHYATVLD-GSRPMLVRGRDRRKDQSYVLADVPPEVLARLWLPLGELSKDEVRTRAHAAG 179 Query: 187 LVTAKKKDSTGICFIGERKFREFLGRYLPAQPGKIITVDGDEIGEHQGLMYHTLGQRKGL 246 L K+DS +CF+ + F+ + + V G+ +G T+GQR Sbjct: 180 LPVWDKRDSQDVCFVPHGR-AAFVSAAVGLTDVPVRDVAGEPVGVTLPFELATVGQR--- 235 Query: 247 GIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLHWVDREPFTGTMRC 306 + P YV+ K V G L++ I + +V P + +R Sbjct: 236 -LREPGRSGSTPRYVIAKS----RTAVRVGSASDLLVAAQPIEDLVSYV---PRSEPLRG 287 Query: 307 TVKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTPGQSAVFYN-GEVCLGGG 358 V+T +P ++ V FDEP V PGQ V Y+ + L Sbjct: 288 LVQTAAHGVALPGSLS-----EAAVAFDEPARRVAPGQRVVLYDAKDRVLASA 335 >UniRef50_Q3DBK5 TRNA methyl transferase (Fragment) n=5 Tax=cellular organisms RepID=Q3DBK5_STRAG Length = 204 Score = 327 bits (840), Expect = 3e-88, Method: Composition-based stats. Identities = 125/205 (60%), Positives = 162/205 (79%), Gaps = 3/205 (1%) Query: 1 MSE-TAKKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYCTAAADLADAQ 59 M++ + +V+VGMSGGVDSSV+A LL++QGY V G+FMKNW++ D CTA D D Sbjct: 1 MTDNSNIRVVVGMSGGVDSSVTALLLKEQGYDVIGVFMKNWDDTDEFGVCTATEDYKDVA 60 Query: 60 AVCDKLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDL 119 AV D++GI ++VNF EYWD VFE FLAEY+AGRTPNPD++CNKEIKFKAFL++A L Sbjct: 61 AVADQIGIPYYSVNFEKEYWDRVFEYFLAEYRAGRTPNPDVMCNKEIKFKAFLDYAM-TL 119 Query: 120 GADYIATGHYVRR-ADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQV 178 GADY+ATGHY + D +G +LRG+D+NKDQ+YFL LS EQ+ ++LFP+G L+KP+V Sbjct: 120 GADYVATGHYAQVTRDKNGIVHMLRGVDNNKDQTYFLSQLSQEQLQKTLFPLGHLQKPEV 179 Query: 179 RKIAEDLGLVTAKKKDSTGICFIGE 203 R+IAE+ GL TAKKKDSTGICF+ + Sbjct: 180 RRIAEEAGLATAKKKDSTGICFMEK 204 >UniRef50_C6HVS1 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase n=1 Tax=Leptospirillum ferrodiazotrophum RepID=C6HVS1_9BACT Length = 372 Score = 320 bits (822), Expect = 4e-86, Method: Composition-based stats. Identities = 109/378 (28%), Positives = 181/378 (47%), Gaps = 29/378 (7%) Query: 2 SETAKKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDD-------GEEYCTAAAD 54 + K +++GMSGGVDS+VSAWLL+++GY V G+ ++ W +D GE C Sbjct: 1 MKRNKSIVIGMSGGVDSAVSAWLLKKEGYDVTGVILRLWGKDSSEASKGWGERTCC---H 57 Query: 55 LADAQAVCDK-LGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLE 113 + + +C K L I V+ + + +V + F + Y+ G TPNP CN+++K L Sbjct: 58 VPMVEYLCQKILNIPYAIVDAESAFKSDVVDSFKSAYRTGETPNPCTSCNEKVKLP-LLR 116 Query: 114 FAAEDLGADYIATGHYV--RRADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVG 171 AE+ G +ATGHY +R++ S L D KDQSYFL ++FPVG Sbjct: 117 RWAEENGIPKVATGHYTYWKRSEDFNVSGLAMAHDLAKDQSYFLSRTPDLCPENTVFPVG 176 Query: 172 ELEKPQVRKIAEDLGLVTAKKKDSTGICFIGERKFREFLGRYLPAQ---PGKIITVDGDE 228 + KPQVR++A + G ++ +CF+ E++ EFL + P + T+ G+ Sbjct: 177 RMSKPQVRELAREAGFPVEGLLENQEVCFVSEKRVTEFLSHEIDQDHRGPWTVRTIAGEA 236 Query: 229 IGEHQGLMYHTLGQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLI 288 +G + T GQRKGL + G + YV D++ L ++ + L Sbjct: 237 LGTIPTGIGLTRGQRKGLSVAGGR-----RLYVHTVDIQERQLWLSDRSD---LFESAFT 288 Query: 289 A-QQLHWVDREPFTGTMRCTVKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTPGQSAV 347 + + + V+ R + +PC V+ ++ R + P + GQ A Sbjct: 289 VKSPMGMMFEKKGKKLGELFVRFRSTMSPVPCRVEDAEEGRFR--LERPHDGIVEGQVAA 346 Query: 348 FYN-GEVCLGGGIIEQRL 364 FY+ + +G G+I ++ Sbjct: 347 FYDKENILVGSGLIIRKG 364 >UniRef50_A8NDW7 Putative uncharacterized protein n=1 Tax=Coprinopsis cinerea okayama7#130 RepID=A8NDW7_COPC7 Length = 299 Score = 319 bits (818), Expect = 1e-85, Method: Composition-based stats. Identities = 113/326 (34%), Positives = 159/326 (48%), Gaps = 46/326 (14%) Query: 12 MSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDD---GEEYCTAAADLADAQAVCDKLGIE 68 MSGGVDSSV+A LL QQ Y + +FM+NW+ D + C D D Q VC KL I Sbjct: 1 MSGGVDSSVAALLLAQQDYDLSAVFMRNWDTRDESGSDRGCEWEKDWEDVQRVCKKLDIP 60 Query: 69 LHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGAD--YIAT 126 ++ AE N+EIKF A LE D + AT Sbjct: 61 CSMLSRKAE------------------------DNREIKFGALLERLPPDSSGQRPWFAT 96 Query: 127 GHYVRRADVDG---KSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQVRKIAE 183 GHY R+ +G + +L+R D +KDQ+Y+L ++S + ++LFP+ L+KPQVR++A+ Sbjct: 97 GHYARKTWSEGPNARPKLVRPADGHKDQTYYLSSISESGLQRALFPINHLQKPQVRELAQ 156 Query: 184 DLGLVTAKKKDSTGICFIGER-KFREFLGRYLPAQPGKIITV-DGDEIGEHQGLMYHTLG 241 L A++ DS GICF+GE+ KF FL Y+PAQ G II G +G+HQGL +T+G Sbjct: 157 KHDLHNAQRPDSVGICFVGEKAKFHNFLSNYIPAQKGLIIDETTGKVLGKHQGLWNYTIG 216 Query: 242 QRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLHWVDREPFT 301 + L G V KD N + V G H L + + + W+ + Sbjct: 217 EGSRL------PGMPTRMAVSRKDPSTNTIYVVPGMRHESLYTNVINVPEFTWIWSDSVP 270 Query: 302 GT------MRCTVKTRYRQTDIPCTV 321 R +V RYR +P V Sbjct: 271 TELDTPEGFRASVMHRYRMKAVPFLV 296 >UniRef50_B0MXW7 Putative uncharacterized protein n=1 Tax=Alistipes putredinis DSM 17216 RepID=B0MXW7_9BACT Length = 339 Score = 318 bits (815), Expect = 2e-85, Method: Composition-based stats. Identities = 111/364 (30%), Positives = 160/364 (43%), Gaps = 33/364 (9%) Query: 4 TAKKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYCTAAADLADAQAVCD 63 +V++G SGG+DS + LLQ GY V L + + A L A+ Sbjct: 2 KDNRVLLGFSGGIDSFAAVGLLQAAGYHVTALTLDMRGDS---------ALLEKARLRAG 52 Query: 64 KLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGADY 123 LGI + + V + F Y G TP P CN IK+ A + LG + Sbjct: 53 ALGIPWRMRSVRERFEREVVDYFTDSYFRGCTPAPCTRCNSRIKWPCLAAEA-DALGIRH 111 Query: 124 IATGHYVRRADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQVRKIAE 183 IATGHY R GK + R D+ KDQSY+L+ L E + + L P+G + K R I E Sbjct: 112 IATGHYFRITSAGGKRYVTRAADNRKDQSYYLWDLPQEILDRVLTPMGTVIK---RNIVE 168 Query: 184 DLGLVTAKKKDSTGICFIGERKFREFLG---RYLPAQPGKIITVDGDEIGEHQGLMYHTL 240 +L A +++S G+CF+ R R+FL + +PG II G +G H G +T+ Sbjct: 169 EL----ADRRESMGVCFLEGRPCRDFLRSRDKTEALRPGPIIDSAGHRLGTHDGAALYTI 224 Query: 241 GQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLHWVDREPF 300 GQ+KGL + W VV D N +V E L+ L + ++ + Sbjct: 225 GQKKGLDLPPG-------WAVVAIDTAANRIVAG---EEKLLLHRTLEVGECRLIESDEV 274 Query: 301 TGTMRCTVKTR--YRQTDIPCTVKALDDDRIEVIFDEPVAAVTPGQSAVFYNGEVCLGGG 358 G R R + V I + ++P A GQ V Y GE +GGG Sbjct: 275 FGARDIRAVIRGIGRNPEGYAAVFPAASG-IRIELEDPAWAPAAGQPVVLYRGERVVGGG 333 Query: 359 IIEQ 362 I+E+ Sbjct: 334 ILER 337 >UniRef50_Q4UE41 Trna methyl transferase, putative n=2 Tax=Theileria RepID=Q4UE41_THEAN Length = 1070 Score = 314 bits (804), Expect = 4e-84, Method: Composition-based stats. Identities = 114/365 (31%), Positives = 179/365 (49%), Gaps = 41/365 (11%) Query: 2 SETAKKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYCTAAADLADAQAV 61 + K+V V +SGGVDSS++ W+++ +G+ V+ +K + +G C++ D++ A V Sbjct: 293 PRSKKRVAVLVSGGVDSSLALWIMKSRGFDVQAFHLKVNDLSNGPGLCSS-NDISYAMEV 351 Query: 62 CDKLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGA 121 C+ L + LH + F+ Y ++ L +Y+ G PNPDILCN IKF FL+ A + G Sbjct: 352 CNILRVTLHVLPFSQVYDKHILSDVLDDYRKGEVPNPDILCNSRIKFGEFLKMATD-WGF 410 Query: 122 DYIATGHYVRRADV-------------------DGKSRLLR---GLDSNKDQSYFLYTLS 159 DY+ATGHY D +G R+ R D+ KDQ+YFL L+ Sbjct: 411 DYVATGHYATLCDDFFTKEQIKSPSYLDGCTSINGYYRIKRLCLSTDTVKDQTYFLSRLN 470 Query: 160 HEQIAQSLFPVGELEKPQVRKIAEDLGLVTAKKKDSTGICFIGERKFREFLGRYLPAQPG 219 Q+++ +FP+G + K QVR A+ +GL T KKDS G+CF+ + E+L + L G Sbjct: 471 QNQMSRLIFPIGNILKTQVRDFAKTVGLPTYNKKDSFGLCFLEDLDLSEYLTKTLGESRG 530 Query: 220 KIITVDGD-EIGEHQGLMYHTLGQRKGL-GIGGTKEGTEEPWYVVDKDVENNILVVAQGH 277 I+ + + IGEH GL T+GQ+K + K P YVV KD+ N L V+ + Sbjct: 531 PIVEYETNKVIGEHNGLYNFTIGQKKTINNYLNPKHVGNTPKYVVKKDIYKNTLYVSASY 590 Query: 278 E-----HPRLMSVGLIAQQLHWVDRE----------PFTGTMRCTVKTRYRQTDIPCTVK 322 +PR + + W + + + VK R+ C + Sbjct: 591 NEDFFTNPRGIRSSFKVRDFFWNTPDYKDLINKVQSEVSDNFKFKVKLRHTPNYNYCNIN 650 Query: 323 ALDDD 327 D+ Sbjct: 651 FKGDE 655 >UniRef50_C4QP81 tRNA(5-methylaminomethyl-2-thiouridylate)-methy lt ransferase,putative (Fragment) n=1 Tax=Schistosoma mansoni RepID=C4QP81_SCHMA Length = 312 Score = 311 bits (797), Expect = 3e-83, Method: Composition-based stats. Identities = 117/297 (39%), Positives = 173/297 (58%), Gaps = 30/297 (10%) Query: 3 ETAKKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYCTAAADLADAQAVC 62 ++ V +SGGVDS+VSA+LL+++G+QV+G+FM NW+ D + C+ D DAQ VC Sbjct: 22 KSIHSVACAISGGVDSAVSAYLLKKKGFQVKGVFMTNWDSLDEKIDCSLDKDRQDAQFVC 81 Query: 63 DKLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEF-------- 114 D LGI NF EYW+ VF + Y+ G TPNPDILCN+ +KF Sbjct: 82 DYLGIPFFEKNFVKEYWNYVFLPLIKSYEQGATPNPDILCNRFVKFNLLTRAVLKSKNQC 141 Query: 115 ------AAEDLGADYIATGHYV--------RRADVDGKSRLLRGLDSNKDQSYFLYTLSH 160 A+ +L AD IATGHY + + ++RLLR +D KDQ+++L T+SH Sbjct: 142 ADDDSQASSNLAADAIATGHYCQNSFGNYLQYRKDNVEARLLRSVDRVKDQTFWLSTISH 201 Query: 161 EQIAQSLFPVGELEKPQVRKIAEDLGLV-TAKKKDSTGICFIGERKFREFLGRYLPAQPG 219 +++ +FPVG+L K QV++IA+D+GL +++S G+CFIG+R+F EF+ YL +PG Sbjct: 202 KELPYCMFPVGDLLKTQVKQIAQDIGLSRIYSRRESMGMCFIGKRRFSEFIDNYLEPKPG 261 Query: 220 KIITVDGD-EIGEHQGLMYHTLGQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQ 275 ++ D + EH G+ + TLGQR + + P+YV D N I+ V Sbjct: 262 VYKDLETDQVLEEHTGVHHFTLGQRIPI------KRFNGPYYVSKMDCHNQIIYVVS 312 >UniRef50_B6AN65 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase 1 n=2 Tax=Leptospirillum sp. Group II RepID=B6AN65_9BACT Length = 361 Score = 299 bits (766), Expect = 1e-79, Method: Composition-based stats. Identities = 109/372 (29%), Positives = 173/372 (46%), Gaps = 37/372 (9%) Query: 10 VGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDG-------------EEYCTAAADLA 56 +G+SGG+DS+VSA LL++ G+ V G ++ W E+ E C L Sbjct: 1 MGLSGGIDSTVSALLLKEAGFDVYGAIVEIWSENSAGGQSGDEREKPWFERACC---HLP 57 Query: 57 DAQAVCDK-LGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFA 115 + +C++ L I ++ + + ++F Y G TPNP CN EIK K +++A Sbjct: 58 MVKFLCEEYLHIPYVRIDQKQNFQKKIVDVFREGYHNGVTPNPCTDCNAEIKIKTLIDWA 117 Query: 116 AEDLGADYIATGHYVRRADV--DGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGEL 173 E Y+ATGHY R + + + LD KDQSYFL + + + LFP+G Sbjct: 118 -EQQKISYVATGHYARNHYSVRNRLWGIAQALDRKKDQSYFLSRVPEHVLRKVLFPLGHW 176 Query: 174 EKPQVRKIAEDLGLVTAKKKDSTGICFIGERKFREFLGRYLPAQP---GKIITVDGDEIG 230 K +VR+ A + + ++ CF+ + FL R A + ++G++IG Sbjct: 177 TKDKVREFARSKKIPVEEMVENMEACFLSAKNVTSFLKREEEAHSSGNWNVTDINGEKIG 236 Query: 231 EHQGLMYHTLGQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQ 290 E + T GQRKG+G+ + E YV DV+N ++++ + L I Sbjct: 237 EIPTGIGLTKGQRKGIGVANS-----ERIYVKKVDVQNKVVIMGSKKD--ILNRNFRIRD 289 Query: 291 QLHWVDREPFTGTMRCTVKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTPGQSAVFYN 350 L + ++ TG + VK R +PC ++ + VTPGQ AVFY+ Sbjct: 290 PLGPLFQKKITGNL--FVKFRSVMEAVPC----IEKGDLRFELSNENDGVTPGQIAVFYD 343 Query: 351 GEV-CLGGGIIE 361 E LG GI+E Sbjct: 344 DEQMVLGSGILE 355 >UniRef50_B8IYA5 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase n=1 Tax=Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 RepID=B8IYA5_DESDA Length = 425 Score = 298 bits (765), Expect = 2e-79, Method: Composition-based stats. Identities = 129/425 (30%), Positives = 167/425 (39%), Gaps = 82/425 (19%) Query: 2 SETAKKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYCTAAADLADAQAV 61 S + V V +SGGVDS + +LQQ GY V L + E AA A Sbjct: 15 STLSNTVAVAVSGGVDSLCALVMLQQAGYSVLALHGLFLPDAAPEPPPGLAAACAALG-- 72 Query: 62 CDKLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGA 121 + LH + + V F A Y AGRTPNP LCN+ IKF A + A LGA Sbjct: 73 -----VPLHVADLRPVFEREVLAPFAAAYAAGRTPNPCALCNRAIKFGALFDAAM-GLGA 126 Query: 122 DYIATGHYVRRADVD------------------------------------------GKS 139 +ATGHY R A Sbjct: 127 QRLATGHYARLAAAPEDAVTALLPEGLDPAASRDNARISAVDNGCGCTEGRHGVSGAHPP 186 Query: 140 RLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQVRKIAEDLGLVTAKKKDSTGIC 199 L D+ KDQSYFL + E++A++ FP+ E +K + R+I GL +S IC Sbjct: 187 LLAAAHDAAKDQSYFLSLVPRERLARACFPLAEQDKARSREIVARAGLAVPVPNESQDIC 246 Query: 200 FIG------------ERKFREFLGRY------LPAQPGKIITVDG----DEIGEHQGLMY 237 F +R FL R +P PG + D EI H+GL Sbjct: 247 FAPVVSGAATAGLAAADAYRPFLERRWQKAALVPPGPGPVFLRDAAGGLREIARHKGLWR 306 Query: 238 HTLGQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLHWVDR 297 +T GQRKGLGI + EP YV+ KD N LVV L + + V Sbjct: 307 YTEGQRKGLGIAHS-----EPLYVLAKDGTANALVVGPRA---LLGVTRCLTGAAN-VSL 357 Query: 298 EPFTGTMRCTVKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTPGQSAVFYNGE-VCLG 356 T V+ R+RQ P V R+++ F EP PGQ A Y+G L Sbjct: 358 PQQYWTGELLVRLRHRQKPSPAVVTLDASGRLDICFAEPQFPSAPGQVAAVYDGRGHVLA 417 Query: 357 GGIIE 361 GI+E Sbjct: 418 AGIVE 422 >UniRef50_B6KA02 tRNA methyltransferase domain-containing protein n=3 Tax=Toxoplasma gondii RepID=B6KA02_TOXGO Length = 1598 Score = 251 bits (641), Expect = 4e-65, Method: Composition-based stats. Identities = 97/328 (29%), Positives = 141/328 (42%), Gaps = 83/328 (25%) Query: 2 SETAKKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEED------------------ 43 + + +V V +SGGVDSSVS LLQQ+G+ + F+K W + Sbjct: 827 ASSPPQVAVLLSGGVDSSVSLCLLQQRGFAPQAFFIKVWLPELLLVSRHLNRLLDSGLAP 886 Query: 44 DGEEYCTAAADLADAQAVCDKLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCN 103 C DL A VC + + L + YW+ V + L E + G TPNPD CN Sbjct: 887 AAAGGCGWERDLLFADQVCRQARVPLEVLPLQEAYWEGVVQQMLDEARQGLTPNPDWWCN 946 Query: 104 KEIKFKAFLEFAA---EDLGADYIA----------------------------TGHYVRR 132 + +KF AFL+ A IA +GHY R Sbjct: 947 QRVKFGAFLDLLDGRETRFSARRIAGESEGENEKEEADMPFLRNSSRWTGAVASGHYARV 1006 Query: 133 ---------------------------------ADVDGKSRLLRGLDSNKDQSYFLYTLS 159 ++ + ++RL RG D KDQSYFL LS Sbjct: 1007 VPAAETSRRSEEGEDTEDRDEDGEEDRGDKERGSEEERRTRLFRGKDRRKDQSYFLSGLS 1066 Query: 160 HEQIAQSLFPVGELEKPQVRKIAEDLGLVTAKKKDSTGICFIGERKFREFLGRYLPAQPG 219 Q+ + + PVG++EK +VR++A L L TA+++DS G+CF+G F +L + G Sbjct: 1067 QRQLRRLVTPVGDMEKVEVRRLAAALDLPTARRQDSQGLCFLGNLSLSFFFRHFLGSSTG 1126 Query: 220 KIITVDGD-EIGEHQGLMYHTLGQRKGL 246 ++ +G H GL T+GQRKG+ Sbjct: 1127 PVLHFPSCLALGSHDGLWNFTVGQRKGV 1154 Score = 54.4 bits (130), Expect = 6e-06, Method: Composition-based stats. Identities = 17/53 (32%), Positives = 20/53 (37%), Gaps = 4/53 (7%) Query: 313 RQTDIPCTVKALDDD----RIEVIFDEPVAAVTPGQSAVFYNGEVCLGGGIIE 361 R P V+ + EP + PGQ A Y GE CLG G I Sbjct: 1528 RAPFGPSRVETSAGSSGAWTAWIELAEPDEGLAPGQIAAIYEGEECLGAGRIS 1580 >UniRef50_C7LK58 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase n=1 Tax=Candidatus Sulcia muelleri SMDSEM RepID=C7LK58_SULMS Length = 470 Score = 245 bits (627), Expect = 2e-63, Method: Composition-based stats. Identities = 107/224 (47%), Positives = 144/224 (64%), Gaps = 8/224 (3%) Query: 6 KKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYCTAAADLADAQAVCDKL 65 K+VIVGMSGGVDSSV+A LL++QGY+V G+++K + CT D DA V L Sbjct: 2 KRVIVGMSGGVDSSVAALLLKKQGYEVIGIYLK---YSNIYNQCTWREDSIDAMLVSQTL 58 Query: 66 GIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGADYIA 125 I + ++ + Y + + EY+ G TPNPDILCN +IKFK FLE + L +D+IA Sbjct: 59 KIPFYIIDISKIYKKKIIKYIYKEYRKGFTPNPDILCNSKIKFKIFLEKLID-LKSDFIA 117 Query: 126 TGHYVRRADV--DGK--SRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQVRKI 181 TGHYV + ++ +GK ++ G+D NKDQSYFL L+ QI +SLFP+G L K +VR+I Sbjct: 118 TGHYVIKKEIFENGKIYYQIKSGIDQNKDQSYFLCKLNQNQIKKSLFPLGNLTKKEVRQI 177 Query: 182 AEDLGLVTAKKKDSTGICFIGERKFREFLGRYLPAQPGKIITVD 225 A L+ AKKKDS GICFIG+ KF FL L + G II ++ Sbjct: 178 ASKYHLINAKKKDSQGICFIGKIKFFNFLKLKLKKKEGSIIEIN 221 Score = 145 bits (367), Expect = 2e-33, Method: Composition-based stats. Identities = 49/139 (35%), Positives = 71/139 (51%), Gaps = 7/139 (5%) Query: 224 VDGDEIGEHQGLMYHTLGQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLM 283 DG IG+H G + T GQRKGL IG G + P +V++KD++NNIL V G HP L Sbjct: 336 EDGKIIGKHIGAHFFTKGQRKGLKIG----GYKFPLFVIEKDIKNNILYVGMGKNHPGLY 391 Query: 284 SVGLIA--QQLHWVDREPFTGTMRCTVKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVT 341 + ++ + +HW++ + RYRQ T+ ++I V F+ P AV Sbjct: 392 TKVVLIKKKNIHWINPNHDFFKKEVKCRIRYRQKLQKATLYKKK-NKIYVEFEIPQLAVN 450 Query: 342 PGQSAVFYNGEVCLGGGII 360 GQ V+Y +G G I Sbjct: 451 AGQFIVWYINNEVIGSGRI 469 >UniRef50_A6BB58 3-oxoacyl-[acyl-carrier-protein] synthase 1 (Fragment) n=1 Tax=Vibrio parahaemolyticus AQ3810 RepID=A6BB58_VIBPA Length = 331 Score = 232 bits (592), Expect = 2e-59, Method: Composition-based stats. Identities = 123/154 (79%), Positives = 137/154 (88%), Gaps = 2/154 (1%) Query: 97 NPDILCNKEIKFKAFLEFAAEDLGADYIATGHYVRRA--DVDGKSRLLRGLDSNKDQSYF 154 NPDILCNKEIKFKAFLEFA E L ADYIA GHYVRR+ + K ++LRGLDSNKDQSYF Sbjct: 1 NPDILCNKEIKFKAFLEFADEVLEADYIAMGHYVRRSFPENGEKPQMLRGLDSNKDQSYF 60 Query: 155 LYTLSHEQIAQSLFPVGELEKPQVRKIAEDLGLVTAKKKDSTGICFIGERKFREFLGRYL 214 LYTLSHEQ+A+SLFPVG+LEKP+VR+IAE+ GL+TAKKKDSTGICFIGERKF EFLGRYL Sbjct: 61 LYTLSHEQVARSLFPVGDLEKPEVRRIAEEQGLITAKKKDSTGICFIGERKFTEFLGRYL 120 Query: 215 PAQPGKIITVDGDEIGEHQGLMYHTLGQRKGLGI 248 PAQPG I T +G+ IG+HQGLMYHTLGQRKGL I Sbjct: 121 PAQPGNIETPEGEVIGQHQGLMYHTLGQRKGLHI 154 >UniRef50_C9ZUV8 tRNA-methyl transferase, putative n=2 Tax=Trypanosoma brucei RepID=C9ZUV8_TRYBG Length = 557 Score = 213 bits (542), Expect = 1e-53, Method: Composition-based stats. Identities = 137/533 (25%), Positives = 188/533 (35%), Gaps = 188/533 (35%) Query: 1 MSETAKKVIVGMSGGVDSSVSAWLLQQ---QGYQVEGL---------------------- 35 M+ A +V V +SGGVDS+V+A L + VE L Sbjct: 1 MTSQAVRVAVALSGGVDSAVAALFLCRCVSTWRDVEALWRSPRPLPLDTVMDAIVKRRAW 60 Query: 36 -------------------------FMKNWEEDDG------------------EEYCT-A 51 FMKNW++ +C A Sbjct: 61 ADITQSSATTPMQQNPTTAVHYFPLFMKNWDDVSEGSDGSASDTCENIGGNQRRRWCEAA 120 Query: 52 AADLADAQAVCDKLGI-----ELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEI 106 D DA V G+ L NF++ Y + F+ L Y G T N D+LCN EI Sbjct: 121 EQDYHDAAEVARFAGLLSESEALPLFNFSSHYVTSCFDRMLNSYARGNTLNVDVLCNSEI 180 Query: 107 KFKAFLEFAAEDLGADYIATGHYVRR------------ADVDGKSRLLR--------GLD 146 KF A L A Y+ATGHY R A G R R G D Sbjct: 181 KFGALLHALHTSGRAQYVATGHYARTISLADTVFCSAAASESGNGRYTRVIARPFTAGQD 240 Query: 147 SNKDQSYFLYTLSHEQIAQSLFPVGEL--EKPQVRKIAEDLGLV-TAKKKDSTGICFIGE 203 N DQ+ FL LS Q++ +FP+G + K VR +A LGL + KK STG+CF+GE Sbjct: 241 LN-DQTLFLSRLSRLQLSNVIFPLGHVFQRKADVRVVASHLGLTRVSAKKTSTGLCFVGE 299 Query: 204 RKFR-------------EFLG-----------------RYLPAQPGKIITVD-----GDE 228 R R E++ +YL A+ +II D G Sbjct: 300 RYKRKAGKGGGFGAFLTEYMASAPEESGGKGVHADEETKYLDAETEQIIAADQLNIPGTV 359 Query: 229 IGEHQGL---MYHTLGQRKGLGIGGTKEGTEEPWYVVDKDVE-----------------N 268 + + L Y T+GQR +G + G+ +YV K+V Sbjct: 360 RRQDRTLLPAHYLTVGQRIRGAVGNS--GSPRCYYVQRKEVSPIHGYEKCGENCCIRYLR 417 Query: 269 NILVVAQGHEHPRLMSVGLIAQQL---------------HWVDREPFTGT------MRCT 307 N+ +V + HP L + + + R P G +RC+ Sbjct: 418 NVWLVNRW-NHPLLYNTLVKLSDVVLPLRMTQLLMLSLAFPPSRSPRHGEEGEEVCLRCS 476 Query: 308 VKTRYRQTDIP-------CTVKALDDDR----IEVIFDEPVAAVTPGQSAVFY 349 TR++ P C V+ V FD PV A T GQ+ V Y Sbjct: 477 CCTRHQDPLHPAVLRFRACEVQEFAGGTSVNFAVVEFDTPVRAATAGQTLVGY 529 >UniRef50_Q4QIT1 TRNA-methyl transferase, putative n=4 Tax=Leishmania RepID=Q4QIT1_LEIMA Length = 603 Score = 211 bits (538), Expect = 3e-53, Method: Composition-based stats. Identities = 122/481 (25%), Positives = 162/481 (33%), Gaps = 154/481 (32%) Query: 19 SVSAWLLQQQGYQVEGLFMKNWEEDDGEEYCT--AAADLADAQAVCDKL------GIELH 70 S++A Q FM+NW +D A D DAQ V L G L Sbjct: 82 SITAASYDAAPVQHTPFFMRNWHDDSAASGWCVRAQVDYDDAQQVARTLDLLPRDGTPLP 141 Query: 71 TVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGADY----IAT 126 + ++EY + FE LA Y AG T N D+LCN +IKF A A G+ + +AT Sbjct: 142 WYDLSSEYVEQCFERMLAAYAAGHTLNVDVLCNSKIKFGAL-TRALRRTGSVFSETLLAT 200 Query: 127 GHYVRRADVDGKSRLLRGLDSNK-----------------DQSYFLYTLSHEQIAQSLFP 169 GHY R D+ G D K DQ+ FL + +A ++FP Sbjct: 201 GHYARTWDLPHGVH---GGDDAKRRPVLLVRPCSAGRDLNDQTVFLSRVPPSALATAIFP 257 Query: 170 VGEL--EKPQVRKIA-EDLG-------------------LVTAKKKDSTGICFIGE---- 203 +G L K VR +A G ++KK STGICF+G Sbjct: 258 LGHLFTCKADVRALARHSFGQSGSTAAVASSNGEPQRTVAHISRKKTSTGICFVGPPSAA 317 Query: 204 ---------RKFREFLGRYL----------------PAQPGKIITVDGDEIGEHQGLMY- 237 +F FL YL A G+ + V GD G Sbjct: 318 TCAGNTSCSSRFPLFLNEYLPPPPPPSGPSTRTVFCDAVTGEELLVPGDTTEHFAGASLQ 377 Query: 238 ---------------------------HTLGQRKGLGIGGTKEGTEE-PWYVVDK----- 264 TLGQR L E +YV DK Sbjct: 378 SSACRLYRGPMCGALRVDYPGLLPAYAFTLGQRVRLCRRTVDGRVREAAYYVADKVLAPL 437 Query: 265 ---DVENN---------ILVVAQGHEHPRLMSVGLIAQQLHW------------VDREPF 300 + +N + V + L + LHW V+ E Sbjct: 438 PLSALSDNKAVPVRLLAEVRVVAQWNNALLYTSQATVASLHWWLPLPMLHQRAVVNHERG 497 Query: 301 TGTMRCTVKTRYRQTDIPCTVKALDDD------------RIEVIFDEPVAAVTPGQSAVF 348 +RC TR+ + P TV+ D R V FD P+ AVTPGQ+ V Sbjct: 498 MYGLRCHCCTRHHEALQPATVEWEAADEELSADAEVRVRRARVHFDAPLRAVTPGQALVA 557 Query: 349 Y 349 Y Sbjct: 558 Y 558 Score = 45.9 bits (108), Expect = 0.002, Method: Composition-based stats. Identities = 11/26 (42%), Positives = 21/26 (80%) Query: 2 SETAKKVIVGMSGGVDSSVSAWLLQQ 27 + + ++ +G+SGGVDS+V+A +LQ+ Sbjct: 6 TRSQLRIAIGLSGGVDSAVTALVLQR 31 >UniRef50_C1SG68 Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase with PP-loop ATPase domain n=1 Tax=Denitrovibrio acetiphilus DSM 12809 RepID=C1SG68_9BACT Length = 164 Score = 199 bits (507), Expect = 1e-49, Method: Composition-based stats. Identities = 60/171 (35%), Positives = 91/171 (53%), Gaps = 9/171 (5%) Query: 5 AKKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYCTAAADLADAQAVCDK 64 +KV++ MSGGVDS+++A +++++GY V G +K ++E L D + + Sbjct: 2 KEKVLIAMSGGVDSTLTAHIMKEKGYDVIGCTIKFFDEQT--------EALHDGEKAAKE 53 Query: 65 LGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGADYI 124 LGI+ + ++ + ++V F+ Y GRTPNP CN+ KF + GA I Sbjct: 54 LGIDWYYADYTDYFKEDVISYFIRTYIQGRTPNPCAHCNRHAKFNYLF-REMKSKGATKI 112 Query: 125 ATGHYVRRADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEK 175 ATGHY + V K +G D KDQSY+L L Q FP+GE+EK Sbjct: 113 ATGHYAGKVKVGEKYFFKKGQDVRKDQSYYLCLLKDHQREVIEFPLGEMEK 163 >UniRef50_Q7X189 Lfe204p1 (Fragment) n=1 Tax=Leptospirillum ferrooxidans RepID=Q7X189_9BACT Length = 238 Score = 198 bits (504), Expect = 3e-49, Method: Composition-based stats. Identities = 63/194 (32%), Positives = 106/194 (54%), Gaps = 15/194 (7%) Query: 5 AKKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYCTAAAD---------- 54 K+V+VGMSGGVDS+VSA +++Q GY V G ++ W+ +D E ++ + Sbjct: 2 NKRVLVGMSGGVDSAVSALIMKQSGYDVTGAIIEIWDSEDSSECHPSSENARPWSERGCC 61 Query: 55 -LADAQAVCDK-LGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFL 112 + + +C++ L I V+ ++ V + F EY TPNP + CN +K + Sbjct: 62 HVPMVRYLCEEVLEIPFVMVDRRDDFRKKVMDPFRDEYLKALTPNPCVTCNARVKIHELI 121 Query: 113 EFAAEDLGADYIATGHYVRR--ADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPV 170 A + LG + +ATGHY R+ + V G+ + +G D + F +L E+IA+ ++P+ Sbjct: 122 ALA-DSLGIEMVATGHYARKVYSPVTGQYHVAKGRDPGEGPVLFFGSLKSEEIARLVWPL 180 Query: 171 GELEKPQVRKIAED 184 +L K +VRK+A D Sbjct: 181 SDLTKEEVRKLARD 194 >UniRef50_C1SG69 Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase with PP-loop ATPase domain n=1 Tax=Denitrovibrio acetiphilus DSM 12809 RepID=C1SG69_9BACT Length = 211 Score = 194 bits (493), Expect = 5e-48, Method: Composition-based stats. Identities = 65/210 (30%), Positives = 102/210 (48%), Gaps = 16/210 (7%) Query: 157 TLSHEQIAQSLFPVGELEKPQVRKIAEDLGLVTAKKKDSTGICFIGERKFREFLGRYLPA 216 ++ E+++ + +K V+ A +LGL A K +S ICF+ +R+FL + Sbjct: 14 KITREKLSNFHW--ERWKKTDVKAKAAELGLSVADKDESQDICFLKGGDYRDFLESKIDK 71 Query: 217 ---QPGKIITVDGDEIGEHQGLMYHTLGQRKGLGIGGTKEGTEEPWYVVDKDVENNILVV 273 + G I DG++ EH+G++Y+T+GQRKGLGI G EP +V D E+ +++ Sbjct: 72 DSIKKGWFI-KDGEKFKEHEGIIYYTIGQRKGLGI-----GYHEPLFVKHIDAESGNIIL 125 Query: 274 AQGHEHPRLMSVGLIAQQLHWVDREPFTGTMRCTVKTRYRQTDIPCTVKALDDDRIEVIF 333 E + G+ + D R VK RYR +PC V+ + ++F Sbjct: 126 GNKDE---VTGTGVKVHDFVFPDD--HDRVFRAEVKVRYRMAPVPCMVEIHPGNTATILF 180 Query: 334 DEPVAAVTPGQSAVFYNGEVCLGGGIIEQR 363 D P A TPGQ A Y ++ GG IE Sbjct: 181 DRPEFAPTPGQIACVYENDLVTCGGYIESV 210 >UniRef50_Q5DCM7 SJCHGC00881 protein n=2 Tax=Schistosoma japonicum RepID=Q5DCM7_SCHJA Length = 259 Score = 180 bits (457), Expect = 8e-44, Method: Composition-based stats. Identities = 66/243 (27%), Positives = 111/243 (45%), Gaps = 49/243 (20%) Query: 167 LFPVGELEKPQVRKIAEDLGLV-TAKKKDSTGICFIGERKFREFLGRYLPAQPGKIITVD 225 +FPVG L K QV++IA+D+GL +++S G+CFIG+R+F EF+ YL +PG Sbjct: 1 MFPVGHLLKTQVKQIAQDIGLSRIYSRRESMGMCFIGKRRFSEFIDNYLEPRPGICKDFG 60 Query: 226 GD-EIGEHQGLMYHTLGQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMS 284 D + EH G+ + TLGQR + + P+YV D I+ V + HP L Sbjct: 61 TDQVLEEHTGVHHFTLGQRVPM------KRFSGPYYVCKMDYHKQIIYVVRDPTHPSLFM 114 Query: 285 VGLIAQQLHWVDREPFTGTMRCTVKTRYRQT--DIPCTVKA------------------- 323 + W++ +PF+ ++ +++ + C++K Sbjct: 115 RKCWSGPAVWINSKPFSSINLKNIQFQWQNKWRPVRCSLKPFNEISLAAAYVKKDVKRCL 174 Query: 324 ---------------LDDDR-----IEVIFDEPVAAVTPGQSAVFYNGEVCLGGGIIEQR 363 ++D+R + + + P+ + PGQ FY+G VCLGG +I Sbjct: 175 SKSDNAALVNTIDASIEDNREIGPCLSIELEVPMRCLAPGQWCAFYDGNVCLGGAMICGS 234 Query: 364 LPL 366 + L Sbjct: 235 ISL 237 >UniRef50_A5KCE1 tRNA methyl transferase, putative n=1 Tax=Plasmodium vivax RepID=A5KCE1_PLAVI Length = 837 Score = 178 bits (451), Expect = 4e-43, Method: Composition-based stats. Identities = 66/258 (25%), Positives = 112/258 (43%), Gaps = 46/258 (17%) Query: 7 KVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYCTAAADLADAQAVCDKLG 66 +V +SGGVDS ++ LL+++ + V ++ +D + +DL + +C K Sbjct: 236 RVAHMLSGGVDSLMALRLLERKKFYVHNFYLHFAHQD------CSKSDLQYVKQICSKRK 289 Query: 67 IELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFL----EFAAEDLGA- 121 L VN EY + V L Y G+ PN DILCN+++K+ + + E G Sbjct: 290 -NLFIVNVNEEYTEQVLIPMLRSYSEGQIPNADILCNEKVKYHLLMRTMRKLCRERGGGW 348 Query: 122 --DYIATGHYVRRADVD-----------------------------GKSRLLRGLDSNKD 150 Y++TGHY + D + +L+ G D KD Sbjct: 349 NYSYVSTGHYAMISTNDEANANRLFNGNFPYVGDELDGEIPRRGPRKRYKLIVGRDERKD 408 Query: 151 QSYFLYTLSHEQIAQSLFPVGELEKPQVRKIAEDLGLVTAKKKDSTGICFIGERKFREFL 210 Q++FL + S +Q+++ LFP+ K V++I E ++++ G+C G L Sbjct: 409 QTFFLSSFSEKQLSKFLFPLCLRRKSDVKRIMERRAAGQYNRRETRGLCLYGRVDMHSLL 468 Query: 211 GRYLPAQPGKIITVDGDE 228 G YL G + G + Sbjct: 469 GLYLG---GAAVEPAGGQ 483 Score = 49.8 bits (118), Expect = 2e-04, Method: Composition-based stats. Identities = 32/211 (15%), Positives = 60/211 (28%), Gaps = 67/211 (31%) Query: 206 FREFLGRYLPAQPGKIIT-----VDGDEIGEHQGLMYHTLGQRKGLGIGGTKEGTEEP-- 258 FR F ++LP+ + DG + ++G+ + +GQ+K + + + Sbjct: 558 FRAFREKHLPSFNLRFKNYIISVEDGTVMDTNEGVHLYAIGQKKYITNHLHQLYNSKGKG 617 Query: 259 ------------------WYVVDK--------DVENNILVVAQGHEHP--RLMSVGLIAQ 290 W VV K +V+ N + V++ +E R + Sbjct: 618 RGRGRGGACEKNVTSSCQWTVVYKKMLRRASGNVKENFIYVSRDYESGLFRQLRGRCRLG 677 Query: 291 QLHWVDREPFTGTMRCT-------------------------------VKTRYRQTDIPC 319 WV P + VK R + Sbjct: 678 AFRWVASAPPSHLGEAEAEKRQTVPLAVQPAMPLTMPLTVPPIGRPICVKVRNSEEIKEA 737 Query: 320 TVKALDDD-RIEVIFDEPVAAVTPGQSAVFY 349 + D + + ++PGQ FY Sbjct: 738 QIALDDAGQTAYLTLRQKDIGLSPGQIVTFY 768 >UniRef50_B3L1V6 tRNA methyl transferase, putative n=1 Tax=Plasmodium knowlesi strain H RepID=B3L1V6_PLAKH Length = 906 Score = 174 bits (443), Expect = 3e-42, Method: Composition-based stats. Identities = 57/238 (23%), Positives = 102/238 (42%), Gaps = 43/238 (18%) Query: 7 KVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYCTAAADLADAQAVCDKLG 66 +V +SGGVDS ++ LL+++ + V F+ ++ + +DL + +C K Sbjct: 331 RVAHMLSGGVDSLMALRLLEKKKFYVHNFFLHFAHQE------CSKSDLRYVKKICSKRK 384 Query: 67 IELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAE-------DL 119 L VN EY + V L Y G+ PN DI+CN+++K+ + + Sbjct: 385 -NLFIVNINEEYTEQVLIPMLRSYADGQIPNADIMCNEKVKYNLLMRKMKKLCRERGGRW 443 Query: 120 GADYIATGHYVRRADVD-----------------------------GKSRLLRGLDSNKD 150 Y++TGHY + D + +L+ G D KD Sbjct: 444 DYSYVSTGHYAMISTNDVSNANKLFSGNFPYVGDDTDGKMPRRTPRKRYKLVVGRDVKKD 503 Query: 151 QSYFLYTLSHEQIAQSLFPVGELEKPQVRKIAEDLGLVTAKKKDSTGICFIGERKFRE 208 Q++FL +LS EQ+++ LFP+ K ++ + E ++++ G+C G Sbjct: 504 QTFFLSSLSEEQLSKFLFPLCLHRKSDIKMVMERREAGKYNQRETRGLCLYGRVDMHS 561 >UniRef50_Q4Y1X1 Putative uncharacterized protein (Fragment) n=1 Tax=Plasmodium chabaudi RepID=Q4Y1X1_PLACH Length = 601 Score = 169 bits (429), Expect = 1e-40, Method: Composition-based stats. Identities = 69/322 (21%), Positives = 118/322 (36%), Gaps = 89/322 (27%) Query: 7 KVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYCTAAADLADAQAVCDKLG 66 KV +SGG+DS ++ LL+++ + V+ + D + DL + +C Sbjct: 260 KVAHMLSGGIDSLMALILLEKKKFYVDNFYFNFAHYD------CSKNDLKYVKNICKNRN 313 Query: 67 IELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAE-------DL 119 LH +N EY++NVF L Y G PNPDI+CN++IK+ L+ D Sbjct: 314 -NLHIININNEYYENVFLPMLKSYSKGEVPNPDIVCNQKIKYNFLLKTIKSISKSKGTDF 372 Query: 120 GADYIATGHYVRRADVDG----------------------------KSRLLRGLDSNKDQ 151 YI+TGHY + D + +L+ D KDQ Sbjct: 373 NYSYISTGHYAMISTNDAQNCNNIFNNNFPYVKGKMGNKKNKKNKKRYKLVVSSDLKKDQ 432 Query: 152 SYFLYTLSHEQIAQSLFPVGELEKPQVRKIAEDLGLVTAKKKDSTGICFIGERKFREFLG 211 ++FL + S +Q+++ LFP+G K ++ + + ++ G+C G L Sbjct: 433 TFFLSSFSEKQLSKFLFPLGLYNKNDIKTFMKKHNITDYNPNETKGLCLYGNVDMHSLLR 492 Query: 212 RYLPA-----------------------------------QPGKIITV------------ 224 Y + I Sbjct: 493 LYFKTDECSNLPPSSNSETVRSEKTAGLDAQVSGVDLHRFKKNDIKDFNLNYVNYIINID 552 Query: 225 DGDEIGEHQGLMYHTLGQRKGL 246 DG + ++ + +T+GQ K + Sbjct: 553 DGIVMEKNSDIHLYTIGQNKHI 574 >UniRef50_UPI000197A71F tRNA-specific 2-thiouridylase MnmA n=1 Tax=Helicobacter canadensis MIT 98-5491 RepID=UPI000197A71F Length = 155 Score = 133 bits (336), Expect = 8e-30, Method: Composition-based stats. Identities = 46/155 (29%), Positives = 74/155 (47%), Gaps = 13/155 (8%) Query: 211 GRYLPAQPGKIITVDGDEIGEHQGLMYHTLGQRKGLGIGGTKEGTEEPWYVVDKDVENNI 270 + Q G ++ G++IG H+G M +T+G+RKG I +G P YV+ + ++N Sbjct: 6 KHHKTEQKGDVLDSKGNKIGTHKGYMQYTIGKRKGFTI----KGALTPHYVLKINPQDNT 61 Query: 271 LVVAQGHEHPRLMSVGLIAQQLHWVDREPF--TGTMRCTVKTRYRQTDIPCTVKALDDDR 328 ++ E L + + A L + +E F + C VK RY+ IP + + + Sbjct: 62 IIAGSKEE---LATNKVQALNLS-LPKEWFQDNKVLDCEVKIRYKSHKIPAQITLMSNGN 117 Query: 329 IEVI---FDEPVAAVTPGQSAVFYNGEVCLGGGII 360 ++I E V GQ+ V YNG LGGG I Sbjct: 118 QDIITANLKESAYGVANGQALVLYNGNEVLGGGFI 152 >UniRef50_C7H4N6 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase n=2 Tax=Faecalibacterium prausnitzii RepID=C7H4N6_9FIRM Length = 170 Score = 129 bits (326), Expect = 1e-28, Method: Composition-based stats. Identities = 54/183 (29%), Positives = 79/183 (43%), Gaps = 28/183 (15%) Query: 3 ETAKKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYCTAAADLADAQAVC 62 E KV+VG+ GG + +LQQQG+ V G ++ CT + A+ Sbjct: 15 EQQDKVLVGLCGGTGCKAAVRILQQQGFAVMGAVVRL---------CTDDPVVDAAKEAA 65 Query: 63 DKLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGAD 122 LGIE T+N + LA A T P +++F A L AA+ LG Sbjct: 66 KALGIECITLNASE----------LASQLAEETAAP-----ADLRFPALL-AAADRLGIQ 109 Query: 123 YIATGHYVRRAD-VDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQVRKI 181 YIATGH R DG L + D+S L L E + + + P+G+ V ++ Sbjct: 110 YIATGHRARVETGADGVHVLCPAEIA--DESARLAALPQETLGRLILPLGDFSPEDVAEM 167 Query: 182 AED 184 A + Sbjct: 168 AAE 170 >UniRef50_B3SFT2 Putative uncharacterized protein (Fragment) n=1 Tax=Trichoplax adhaerens RepID=B3SFT2_TRIAD Length = 116 Score = 126 bits (317), Expect = 1e-27, Method: Composition-based stats. Identities = 40/120 (33%), Positives = 59/120 (49%), Gaps = 9/120 (7%) Query: 242 QRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLHWVD-REPF 300 QRKG+GI K P YV+ D N ++V + + L S L + L+W+ E Sbjct: 1 QRKGIGISNNK-----PLYVIKIDPITNKVIVGEKED---LKSTKLKIKDLNWLSNDEAL 52 Query: 301 TGTMRCTVKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTPGQSAVFYNGEVCLGGGII 360 + C+V+ R +I VK L + +VI P +TPGQ+ V Y+ + LGGG I Sbjct: 53 EKDISCSVRLRSNHKEINADVKYLGNGIADVILKSPYYGITPGQACVIYDKDRVLGGGWI 112 >UniRef50_UPI0001902279 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase n=1 Tax=Mycobacterium tuberculosis GM 1503 RepID=UPI0001902279 Length = 154 Score = 121 bits (305), Expect = 3e-26, Method: Composition-based stats. Identities = 36/144 (25%), Positives = 57/144 (39%), Gaps = 9/144 (6%) Query: 221 IITVDGDEIGEHQGLMYHTLGQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHP 280 ++ DG + H G+ T+GQR+GLGI G P YV D + + V + Sbjct: 2 VVDADGVVLASHDGVHGFTIGQRRGLGIAGPGPN-GRPRYVTAIDADTATVHVGDVTD-- 58 Query: 281 RLMSVGLIAQQLHWVDREPFTGTMRCTVKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAV 340 L L + + +G + C V+ R + + + D + V P+ V Sbjct: 59 -LDVQTLTGRAPVFTAGAAPSGPVDCVVQVRAHGETVSAVAELIGDA-LFVQLHAPLRGV 116 Query: 341 TPGQSAVFYN----GEVCLGGGII 360 GQ+ V Y G+ LG I Sbjct: 117 ARGQTLVLYRPDPAGDEVLGSATI 140 >UniRef50_C7R8C6 tRNA(5-methylaminomethyl-2-thiouridylate)-methyl transferase n=12 Tax=Gammaproteobacteria RepID=C7R8C6_KANKD Length = 362 Score = 121 bits (304), Expect = 5e-26, Method: Composition-based stats. Identities = 54/259 (20%), Positives = 106/259 (40%), Gaps = 39/259 (15%) Query: 2 SETAKKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYC-----TAAADLA 56 + +K + +SGG+DS ++A ++Q+QG VEG+ +G + Sbjct: 14 PQKQRKAVALISGGLDSLLAAKVIQEQGIHVEGINFYTGFCVEGHTHAIRKKDKDKQKRN 73 Query: 57 DAQAVCDKLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAA 116 ++ V ++LGI+LH ++ + EY D V ++ G NP + C + +A A Sbjct: 74 NSLWVAEQLGIKLHIIDISEEYKDIVLNP---KHGYGANLNPCLDCKIFMVNQAQAWAWA 130 Query: 117 EDLGADYIATGHYVRRADVDGK----SRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPV-- 170 E+ G D+I TG + + + + R +S L A++L P Sbjct: 131 EENGFDFIITGEVIGQRPKSQRKETMPIIAR-------ESGADDRLLRPLCAKNLMPTLP 183 Query: 171 ---GELEKPQVR-----------KIAEDLGLVTAKKKDSTGICFIGERKFREFLGRYLPA 216 G +++ Q+ ++A+ G + + G CF+ + + L A Sbjct: 184 EREGWVDREQLYGFSGRSRKPQFELAKQFGFEDFAQP-AGGCCFLTDANYSAKLADLWEA 242 Query: 217 QPGKIITVDGD---EIGEH 232 + + +D ++G H Sbjct: 243 RGERRYELDDIMLLKVGRH 261 >UniRef50_Q8IJK4 tRNA methyltransferase, putative n=1 Tax=Plasmodium falciparum 3D7 RepID=Q8IJK4_PLAF7 Length = 1084 Score = 119 bits (300), Expect = 1e-25, Method: Composition-based stats. Identities = 40/144 (27%), Positives = 66/144 (45%), Gaps = 19/144 (13%) Query: 7 KVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYCTAAADLADAQAVCDKLG 66 ++ +SGGVDS ++ LL+++ + V+ F D + D+ + +C Sbjct: 449 RIAHMLSGGVDSLMALHLLERKKFYVDNYFFNFTNAD------CSKNDIKYVKDICKNNK 502 Query: 67 IELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEF------------ 114 L +N EY+D V L Y G+ PNPDI+CN++IK+ FL+ Sbjct: 503 RNLFIININDEYFDEVLVPMLFFYADGKVPNPDIMCNQKIKYNFFLKVIKSIYKQKWNYR 562 Query: 115 -AAEDLGADYIATGHYVRRADVDG 137 ++ D+I+TGHY D Sbjct: 563 TKSKLCNYDFISTGHYAMIRTNDK 586 Score = 73.6 bits (180), Expect = 1e-11, Method: Composition-based stats. Identities = 24/96 (25%), Positives = 45/96 (46%), Gaps = 7/96 (7%) Query: 139 SRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQVRKIAEDLGLVTAKKKDSTGI 198 +LL D KDQ++FL + +H Q+++ +FP+ K V+K + + K++ G+ Sbjct: 655 YKLLVSNDKKKDQTFFLSSFNHIQLSKFIFPLSLYTKKDVKKYMNENNINNYNHKETKGL 714 Query: 199 CFIGERKFREFLGRYLPAQPGKIITVDGDEIGEHQG 234 C G + L +Y + + D+I Q Sbjct: 715 CLFGNIDMQTLLHKY-------FVNTEKDDIKNKQN 743 >UniRef50_B2TJM2 Argininosuccinate synthase n=30 Tax=Bacteria RepID=B2TJM2_CLOBB Length = 330 Score = 116 bits (290), Expect = 2e-24, Method: Composition-based stats. Identities = 40/167 (23%), Positives = 83/167 (49%), Gaps = 25/167 (14%) Query: 7 KVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYCTAAADLADAQAVCDKLG 66 K + +SGG+DS ++A L+++QG +V G+ K++ ++ +A+ + +++G Sbjct: 3 KALAMISGGLDSILAAKLIKEQGIEVIGICFKSYFFNE-----------ENAKRMTEQIG 51 Query: 67 IELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEF---AAEDLGADY 123 I+L ++F+ E++D V ++ G+ NP I C+ + + E AD+ Sbjct: 52 IKLEVIDFSEEHFDLVRNP---KHGWGKNMNPCIDCHS-----MMMNYSGKLLEKFNADF 103 Query: 124 IATGHYVRRADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPV 170 I TG + + + S+ + L+ K +S + + AQ+L P Sbjct: 104 IITGEVLNQRPM---SQNRQALNIVKKESGYSDKILRPLCAQNLNPT 147 >UniRef50_Q8PZP6 NH(3)-dependent NAD(+) synthetase n=3 Tax=Methanosarcina RepID=NADE_METMA Length = 256 Score = 108 bits (270), Expect = 4e-22, Method: Composition-based stats. Identities = 55/200 (27%), Positives = 84/200 (42%), Gaps = 41/200 (20%) Query: 6 KKVIVGMSGGVDSSVSAWL-LQQQGYQ-VEGLFMKNWEEDDGEEYCTAAADLADAQAVCD 63 K V+VG+SGG+DS+++A L ++ G V G+ M E T A D DA+A+ D Sbjct: 24 KGVVVGISGGIDSALTATLAVKALGKDRVLGIHM-------PESSLTPAVDSEDAEALAD 76 Query: 64 KLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFK---AFLEFAAEDLG 120 LGIE T++ + + F+A + D L +K + + L F A L Sbjct: 77 WLGIEYRTIDISG-----IISAFMAAVPESE--SADRLTKGNLKARTRMSLLYFHANRLN 129 Query: 121 ADYIATGHYVRRADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQVRK 180 I TG NK + Y + L P+G L K V + Sbjct: 130 RMVIGTG--------------------NKTEILLGYYTKYGDGGVDLEPIGGLYKTGVWE 169 Query: 181 IAEDLGLVTA--KKKDSTGI 198 ++ LG+ + KK S G+ Sbjct: 170 LSSRLGIPESLITKKPSAGL 189 >UniRef50_Q12V31 NH(3)-dependent NAD(+) synthetase n=1 Tax=Methanococcoides burtonii DSM 6242 RepID=NADE_METBU Length = 263 Score = 105 bits (262), Expect = 3e-21, Method: Composition-based stats. Identities = 50/203 (24%), Positives = 87/203 (42%), Gaps = 52/203 (25%) Query: 8 VIVGMSGGVDSSVSAWLLQQQ-GYQ-VEGLFMKNWEEDDGEEYCTAAADLADAQAVCDKL 65 +VG+SGG+DS++ A+L + G + V G+ M E T +++ DA V + L Sbjct: 26 AVVGISGGIDSALVAYLSVEALGAENVLGIHM--------PEASTPKSEIEDASKVAEAL 77 Query: 66 GIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDI-----LCNKEIKFK---AFLEFAAE 117 GI+ +N NV E++ RT PDI + +K + + L + A Sbjct: 78 GIDFKVINIT-----NVLEVY-------RTAMPDIDGASAHVDGNLKARIRMSMLYYYAN 125 Query: 118 DLGADYIATGHYVRRADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQ 177 G + TG NK + Y + + P+G+L K + Sbjct: 126 MFGRVVMGTG--------------------NKSEILLGYFTKYGDGGVDIEPIGDLYKTE 165 Query: 178 VRKIAEDLGLVTA--KKKDSTGI 198 VR++++ LG+ + +K S G+ Sbjct: 166 VREMSKMLGVPESILEKAPSAGL 188 >UniRef50_A1AMX6 Thiamine biosynthesis protein n=4 Tax=Desulfuromonadales RepID=A1AMX6_PELPD Length = 335 Score = 104 bits (261), Expect = 4e-21, Method: Composition-based stats. Identities = 64/283 (22%), Positives = 105/283 (37%), Gaps = 61/283 (21%) Query: 5 AKKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYCTAAADLAD--AQAVC 62 +K + SGG+DS ++ L+Q+QG +VE + C++ D A V Sbjct: 2 KRKALALFSGGLDSILAVRLMQEQGIEVEAVSFVL-----PFFSCSSDGTERDLAAARVA 56 Query: 63 DKLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGAD 122 LGI + +NF E+ + + + G+ NP I C + KA + GAD Sbjct: 57 RHLGIPIWVINFGPEFLELIRNPL---HGYGKAVNPCIDCRIHMLVKAREQMV--KCGAD 111 Query: 123 YIATGHYVRRADVDGK--------------SRLLRGLDSNKDQSYFLYT----------L 158 +I TG + + + + LLR L + L+ + Sbjct: 112 FIITGEVLGQRPMSQRRDTMSVVERESGLEGLLLRPLSA-------LHFEPTIPEREGWV 164 Query: 159 SHEQIAQSLFPVGELEKPQVRKIAEDLGLVTAKKKDSTGICFIGERKF----REFLGRYL 214 E++A G K Q+R +A++LG+ G C + E F R+ Sbjct: 165 DRERLAAIK---GRSRKEQMR-LADELGVTEYPNP--GGGCLLTEVSFAPKVRDLFEHCD 218 Query: 215 PAQPGKIITVDGDEIGEHQGLMYHTLGQRKGLGIGGTKEGTEE 257 P + IG H LG+R L IG + + Sbjct: 219 QLDPRDFRLL---RIGRH-----FRLGERCKLIIGRDERDNKR 253 >UniRef50_A0LCE2 Putative uncharacterized protein n=1 Tax=Magnetococcus sp. MC-1 RepID=A0LCE2_MAGSM Length = 346 Score = 103 bits (258), Expect = 1e-20, Method: Composition-based stats. Identities = 53/241 (21%), Positives = 93/241 (38%), Gaps = 38/241 (15%) Query: 1 MSETAKKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYCTAAAD-----L 55 MS++ + + +SGG+DS ++ LL +Q +V + A Sbjct: 1 MSKS--RALGLLSGGLDSMLATKLLMEQDIEVHCVNFYTGFCVQSHTGAIRAKAGDPPPK 58 Query: 56 ADAQAVCDKLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEI--KFKAFLE 113 DA LGI+LH V+ + EY + V +Y G+ NP + C + K A Sbjct: 59 HDALHAAQILGIKLHIVDISEEYVEIVTNP---KYGYGKNLNPCMDCKIFMIKKAWAL-- 113 Query: 114 FAAEDLGADYIATGHYVRRADVDGK--------------SRLLRGLDSNK---DQSYFLY 156 E LG D++ TG V + + + L+R L + + Q L Sbjct: 114 --KEQLGFDFLFTGEVVGQRPMSQRKDTMPVVPREAGVEGWLVRPLSAKRLPETQPELLG 171 Query: 157 TLSHEQIAQSLFPVGELEKPQVRKIAEDLGLVTAKKKDSTGICFIGERKFREFLGRYLPA 216 + +++ G KPQ+ +A+ GL + G CF+ + + + L Sbjct: 172 MVDRQRLLDFH---GRTRKPQM-ALAKQYGLTDY-PAPAGGCCFLTDENYSKRLQDLWDT 226 Query: 217 Q 217 + Sbjct: 227 R 227 >UniRef50_B5YF97 tRNA methyl transferase n=1 Tax=Dictyoglomus thermophilum H-6-12 RepID=B5YF97_DICT6 Length = 327 Score = 103 bits (257), Expect = 1e-20, Method: Composition-based stats. Identities = 38/142 (26%), Positives = 59/142 (41%), Gaps = 20/142 (14%) Query: 4 TAKKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYCTAAADLADAQAVCD 63 + I +SGG+DS ++ WL+ QQG +V G+ T +L + C+ Sbjct: 2 KKVRAISLISGGLDSILATWLILQQGIEVIGVTF-----------YTPFFNLELPKKACE 50 Query: 64 KLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEI--KFKAFLEFAAEDLGA 121 L I LH V+ EY + + G+ NP I C+ + K K L A Sbjct: 51 FLNIPLHVVDITEEYMAILKNP---RFGYGKNMNPCIDCHTFMVKKAKELL----PKFDA 103 Query: 122 DYIATGHYVRRADVDGKSRLLR 143 D+I TG + + + LR Sbjct: 104 DFIITGEVLGERPMSQNKQSLR 125 >UniRef50_A8AAD7 PP-loop domain protein n=1 Tax=Ignicoccus hospitalis KIN4/I RepID=A8AAD7_IGNH4 Length = 383 Score = 102 bits (254), Expect = 3e-20, Method: Composition-based stats. Identities = 45/142 (31%), Positives = 69/142 (48%), Gaps = 15/142 (10%) Query: 3 ETAKKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYCTAAADLADAQAVC 62 E K+V++G+SGG DS +LL++ G +V + D Y + A+L A+ V Sbjct: 44 ELPKRVLLGLSGGKDSVALLYLLKKVGTEVVAATV-----DTVPNYTSLEAEL--AKRVA 96 Query: 63 DKLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGAD 122 ++LG+ +TV Y ++ YK R P +C+K + LE A LG + Sbjct: 97 EELGVTHYTV-----YAKELYGFTALSYKKLRR-APCSICSKLRRHA--LELLARRLGIE 148 Query: 123 YIATGHYVRRADVDGKSRLLRG 144 YIATGH + S +LRG Sbjct: 149 YIATGHNMDDMASWALSYILRG 170 >UniRef50_Q0AXT2 Putative uncharacterized protein n=1 Tax=Syntrophomonas wolfei subsp. wolfei str. Goettingen RepID=Q0AXT2_SYNWW Length = 328 Score = 97.1 bits (241), Expect = 9e-19, Method: Composition-based stats. Identities = 57/269 (21%), Positives = 101/269 (37%), Gaps = 51/269 (18%) Query: 7 KVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYCTAAADLADAQAVCDKLG 66 K + SGG+DS ++A L+++QG V G+ + A A +LG Sbjct: 2 KAVCLFSGGLDSQLAAALVKKQGVTVIGVNF-------SSPFFGANRATHMA---AKELG 51 Query: 67 IELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEI--KFKAFLEFAAEDLGADYI 124 I+L ++ EY + V + Y G+ NP I C+ + K F++ L A ++ Sbjct: 52 IQLFVLDTGKEYIEEVLKN--PVYGYGKNFNPCIDCHGYMLRKAGEFMQ----KLDASFL 105 Query: 125 ATGHYVRRADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQS----------------LF 168 +G + + + L +D S F + A+ L Sbjct: 106 ISGEVLGQRPMSQNRSALNAVDKL---SGFRGLVLRPLSARLLPATIPETEGWVDREQLM 162 Query: 169 PVGELEKPQVRKIAEDLGLVTAKKKDSTGICFIGERKFREFLGRYLPAQPGKIITVDGD- 227 + + + ++AE LG+ G C + E F L + L +P G+ Sbjct: 163 DISGRGRTRQIELAEKLGI--YDYPTPAGGCLLTEASFSRRLKKLLELKPE---LEAGEM 217 Query: 228 ---EIGEHQGLMYHTLGQRKGLGIGGTKE 253 ++G H ++ LG R L +G Sbjct: 218 EILKLGRH----FY-LGDRTLLAVGRNHS 241 >UniRef50_B9LAC4 Thiamine biosynthesis protein:ExsB n=2 Tax=Nautiliaceae RepID=B9LAC4_NAUPA Length = 319 Score = 96.4 bits (239), Expect = 2e-18, Method: Composition-based stats. Identities = 48/252 (19%), Positives = 100/252 (39%), Gaps = 36/252 (14%) Query: 7 KVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYCTAAADLADAQAVCDKLG 66 K I SGG+DS+++ L+Q+Q ++EG+++ E T Q + D+LG Sbjct: 2 KAIALFSGGLDSALAIKLIQEQNIEIEGVYIDVGFE-------TNKQKTEHLQKLADELG 54 Query: 67 IELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGADYIAT 126 I+L ++ +Y + F Y G+ NP I C+ + + + A +I + Sbjct: 55 IKLTVLDIKEQYIKEIL--FNPVYGYGKNMNPCIDCHANM--IRVAKEYMKKTDAKFIIS 110 Query: 127 GHYVRRADVDGKSRLLRGLDSNKD-QSYFLYTLSHEQIAQS------------LFPVGEL 173 G V + + + L ++ + + L LS + + + L + Sbjct: 111 GEVVGQRPMSQRLPALNAVNKLANAEGLVLRPLSAKLLPPTVPEIEGWVERDKLLGISGR 170 Query: 174 EKPQVRKIAEDLGLVTAKKKDSTGICFIGERKFREFLGRY-----LPAQPGKIITVDGDE 228 ++ ++A+ GL + G C + + F + L + L I+ + Sbjct: 171 DRKIQLELAKKYGLENFESP--GGGCLLTDINFSKRLKDFSKTLQLTPHEIDIL-----K 223 Query: 229 IGEHQGLMYHTL 240 +G H + + + Sbjct: 224 VGRHFNIDGYKI 235 >UniRef50_C9R7K7 Thiamine biosynthesis protein-like protein n=1 Tax=Ammonifex degensii KC4 RepID=C9R7K7_AMMDK Length = 329 Score = 94.5 bits (234), Expect = 5e-18, Method: Composition-based stats. Identities = 62/348 (17%), Positives = 118/348 (33%), Gaps = 64/348 (18%) Query: 7 KVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYCTAAADLADAQAVCDKLG 66 K + SGG+DS ++ L++ QG +V G+ + D + A+ + +KLG Sbjct: 2 KALALFSGGLDSILAVKLIKLQGIEVVGVVF-----------TSPFFDASRAKQMAEKLG 50 Query: 67 IELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEI--KFKAFLEFAAEDLGADYI 124 + L V+ E V + G+ NP I C+ + + ++ + GA +I Sbjct: 51 LPLRVVDITEELIPLVLNP---RHGYGKHFNPCIDCHALMLRRAGELMK----EEGASFI 103 Query: 125 ATGHYVRRADVDGKSRLLRGLDSNKD-QSYFLYTLSHEQIAQS------------LFPVG 171 TG + + + L + + Y L LS + + L + Sbjct: 104 ITGEVLGERPMSQNRQALEIVAREAGLEGYVLRPLSALLLPPTIPEKEGWVKREKLLGIK 163 Query: 172 ELEKPQVRKIAEDLGLVTAKKKDSTGICFIGERKFREFLGRYLPAQPGKII-TVDGDEIG 230 + ++A G+ G C + + + + + L +P + + G Sbjct: 164 GRSRKTQLELARQWGIEDFPTP--AGGCLLTDPGYAQRMKELLRLRPAPSRQDFELLKYG 221 Query: 231 EHQGLMYHTLGQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQ 290 H + R G+ I VV + E N ++ L+ + I Sbjct: 222 RH----FF----RPGVQI------------VVARKEEENARLLTLREPADFLLRLKNIPG 261 Query: 291 QLHWVDREPFTGTMRCTV--KTRYRQTDIPCTVKALDDDRIEVIFDEP 336 V P +R RY + + +R+ V EP Sbjct: 262 PRTLVRGNPGEKELRLAAALTIRYS------KAREREKNRVTVDRKEP 303 >UniRef50_Q3AD57 Putative uncharacterized protein n=1 Tax=Carboxydothermus hydrogenoformans Z-2901 RepID=Q3AD57_CARHZ Length = 338 Score = 92.5 bits (229), Expect = 2e-17, Method: Composition-based stats. Identities = 62/340 (18%), Positives = 112/340 (32%), Gaps = 48/340 (14%) Query: 7 KVIVGMSGGVDSSVSAWLLQQQGYQVEGLFM--KNWEEDDGEEYCTAAADLADAQAVCDK 64 K + SGG+DS+++ L+ +QG +VE + + C + A + Sbjct: 3 KALALFSGGLDSTLAIKLILEQGVEVEAVNFTSPFCRCLAKGQGCASTA------KLAAD 56 Query: 65 LGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGADYI 124 LGI+LH N EY V + G NP I C KFK + E++GA ++ Sbjct: 57 LGIKLHVQNCGEEYLRIVENP---PHGYGSALNPCIDCRIF-KFKK-AKKLMEEIGAKFM 111 Query: 125 ATGHYVRRADVDGKSRLLRGLDSNKDQSYFLYTLSHEQ---IAQSLFP------VGELEK 175 TG + + + + +D + ++ FP G + + Sbjct: 112 ITGEVLGQRPNSQRRDAINLIDRE-------AGIKGLVLRPLSALHFPPTIAEQEGYVSR 164 Query: 176 PQVRKIAEDLGLVTAKKKDSTGICFIGERKFREFLGRYLPAQPGKIITVDGDEIGEHQGL 235 ++ I+ + S GI + P G + + G+ Q L Sbjct: 165 DKLLAISGRSRKTQMELAASFGI-----NDY--------PCPSGGCLLTKKEFAGKVQDL 211 Query: 236 MYH----TLGQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQ 291 + + T+ L G + +V ++ + N L+ L V Sbjct: 212 IRYNGKLTVEDIDRLKFGRHFRLSPTAKIIVGRNAQENELISYFKKPGEFLAKVEGFTGP 271 Query: 292 LHWVDREPFTGTMRCTVKT--RYRQTDIPCTVKALDDDRI 329 + P K RY T + +D + Sbjct: 272 TTLIQGNPTEDDFYLAAKVTARYADTPEASVSVRIWNDSV 311 >UniRef50_A5TXN2 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase n=16 Tax=Fusobacterium RepID=A5TXN2_FUSNP Length = 337 Score = 90.6 bits (224), Expect = 9e-17, Method: Composition-based stats. Identities = 39/182 (21%), Positives = 76/182 (41%), Gaps = 27/182 (14%) Query: 1 MSETAKKV--IVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYCTAAADLADA 58 M ++ +K+ + SGG+DS+++ ++Q+QG +V L + A Sbjct: 1 MKDSMEKIKALALFSGGLDSALAIKVVQEQGIEVIALNFVSHFFGGKN---------EKA 51 Query: 59 QAVCDKLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIK--FKAFLEFAA 116 +++ +LGI L ++F + V + Y G+ NP I C+ + LE Sbjct: 52 ESMAKQLGIRLEYIDFKKRHTLVVEDPV---YGRGKNMNPCIDCHSLMFKIAGELLE--- 105 Query: 117 EDLGADYIATGHYVRRADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKP 176 + GA ++ +G + + + S+ L+ K S + A+ L P K Sbjct: 106 -EYGASFVISGEVLGQRPMSQNSQ---ALEKVKKLSGMEDLVLRPLSAKLLPP----SKA 157 Query: 177 QV 178 +V Sbjct: 158 EV 159 >UniRef50_C3XFA5 tRNA methyltransferase n=1 Tax=Helicobacter bilis ATCC 43879 RepID=C3XFA5_9HELI Length = 354 Score = 90.2 bits (223), Expect = 1e-16, Method: Composition-based stats. Identities = 35/149 (23%), Positives = 64/149 (42%), Gaps = 14/149 (9%) Query: 1 MSETAKKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYCTAAADLADAQA 60 M++ + SGG+DS +S LL +QG +V L + ++ Sbjct: 1 MTKKQISAVALFSGGLDSMISMQLLHEQGIKVYALNFNIGFGSNKDKS-------EYFYN 53 Query: 61 VCDKLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLG 120 ++G EL +N A +++DN+ F +Y G+ NP I C+ + AF + +L Sbjct: 54 AAKQVGAELIQINIAKQFFDNIL--FKPQYGYGKYFNPCIDCHANMFSHAFAKMV--ELK 109 Query: 121 ADYIATGHYVRRADVDGKSRLLRGLDSNK 149 AD+ +G + + + +D K Sbjct: 110 ADFAISGEVLGQRPKSQRK---EAMDQVK 135 >UniRef50_Q1K1V6 Thiamine biosynthesis protein n=2 Tax=Desulfuromonadales RepID=Q1K1V6_DESAC Length = 324 Score = 88.7 bits (219), Expect = 3e-16, Method: Composition-based stats. Identities = 49/225 (21%), Positives = 84/225 (37%), Gaps = 41/225 (18%) Query: 12 MSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYCTAAADLADAQAVCDKLGIELHT 71 SGG+DS ++A LL++QG V L T D A AQ + + + L Sbjct: 8 FSGGLDSILAALLLRKQGVDVHCLCF-----------VTPFFDDAKAQEMAARYDLPLQV 56 Query: 72 VNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFA---AEDLGADYIATGH 128 ++ + E+ + Y G+ NP I C+ + E A E+ G D++ +G Sbjct: 57 MDISEEHLKMLKNP---RYGYGKNMNPCIDCHAQ-----MFEIAGRLMEEQGYDFLFSGE 108 Query: 129 YVRRADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPV------GELEKPQV---- 178 + + L ++ S + + ++ L P+ G +++ Q+ Sbjct: 109 VLGQRPKSQIHTALMAVNKA---SGWSGRILRP-LSAKLLPITPMEEQGLVDREQLEDIQ 164 Query: 179 -----RKIAEDLGLVTAKKKDSTGICFIGERKFREFLGRYLPAQP 218 R+ A L K S G C + E F L QP Sbjct: 165 GRSRKRQEALARELGVDKYPSSGGGCLLTENSFSGRLRDLFEHQP 209 >UniRef50_Q1CVE2 Argininosuccinate synthase n=14 Tax=Helicobacter RepID=Q1CVE2_HELPH Length = 350 Score = 88.3 bits (218), Expect = 4e-16, Method: Composition-based stats. Identities = 29/135 (21%), Positives = 58/135 (42%), Gaps = 11/135 (8%) Query: 4 TAKKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYCTAAADLADAQAVCD 63 K + SGG+DS +S LL QG +V L + ++ + Sbjct: 2 KKIKALALFSGGLDSLLSMKLLIDQGIEVTALHFNIGFGGNKDKR-------EYFENATA 54 Query: 64 KLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGADY 123 ++G +L + +++++V F +Y G+ NP I C+ + AF + +L AD+ Sbjct: 55 QIGAKLLVCDIREQFFNDVL--FKPKYGYGKYFNPCIDCHANMFRNAFYKML--ELNADF 110 Query: 124 IATGHYVRRADVDGK 138 + +G + + + Sbjct: 111 VLSGEVLGQRPKSQR 125 >UniRef50_C9MRP4 tRNA(Ile)-lysidine synthase n=1 Tax=Prevotella veroralis F0319 RepID=C9MRP4_9BACT Length = 461 Score = 87.9 bits (217), Expect = 6e-16, Method: Composition-based stats. Identities = 34/176 (19%), Positives = 68/176 (38%), Gaps = 24/176 (13%) Query: 9 IVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYCTAAADLADAQAVCDKLGIE 68 +V +SGG DS ++Q GY+ + + D + D Q++C +L I Sbjct: 22 LVALSGGADSVALLLTMRQLGYETDAVHCNFHLRGD-----ESNRDEEYCQSLCKQLNIP 76 Query: 69 LHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGADYIATGH 128 LH +F + ++ + + +E++++ F + E LGAD I GH Sbjct: 77 LHIAHFDTLTYAEAHKVSIE------------MAARELRYRYFFQ-LKEALGADAICVGH 123 Query: 129 YVRRADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQVRKIAED 184 + + L+RG S L + + P+ + + ++ + Sbjct: 124 HQEDSVETILINLVRGTGL----SGMLGIRPKK--GDIVRPLLCVSRKEIEEYLHQ 173 >UniRef50_Q2LUM8 Putative tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase / fibronectin/fibrinogen-binding protein n=1 Tax=Syntrophus aciditrophicus SB RepID=Q2LUM8_SYNAS Length = 333 Score = 87.9 bits (217), Expect = 6e-16, Method: Composition-based stats. Identities = 55/253 (21%), Positives = 95/253 (37%), Gaps = 53/253 (20%) Query: 4 TAKKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYCTAAADLADAQAVCD 63 K + V SGG+DS ++ ++Q QG +V GL + T A+ Sbjct: 10 KVKGIAV-FSGGLDSIIAVKVIQDQGIEVVGLTFE-----------TPFFSSRKARDAAR 57 Query: 64 KLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAED---LG 120 K+G+ L ++ E+ + Y G+ NP I C+ L+ A + LG Sbjct: 58 KIGLPLKVLDITEEHLKMLMNP---RYGYGKNLNPCIDCHT-----LMLKIAGDKMSELG 109 Query: 121 ADYIATGHYVRRADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQ--- 177 AD+I TG + + + ++L G+ K+ Y Y L ++ L P KP+ Sbjct: 110 ADFIFTGEVLGQRPMSQGKQML-GV-VAKNSGYADYILRP--LSAKLLP---ETKPEREG 162 Query: 178 --VRKI---------------AEDLGLVTAKKKDSTGICFIGERKFREFLGRYLP-AQPG 219 R++ AE G+ G C + + F + L + Sbjct: 163 KINREMLLDIQGRGRKIQISLAEHYGISDYAPP--AGGCLLTDPMFTKRLRDLFDHKKDF 220 Query: 220 KIITVDGDEIGEH 232 I ++ + G H Sbjct: 221 TIRDIELLKFGRH 233 >UniRef50_Q7M837 TRNA METHYLTRANSFERASE n=6 Tax=Helicobacteraceae RepID=Q7M837_WOLSU Length = 333 Score = 87.5 bits (216), Expect = 8e-16, Method: Composition-based stats. Identities = 30/132 (22%), Positives = 57/132 (43%), Gaps = 11/132 (8%) Query: 7 KVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYCTAAADLADAQAVCDKLG 66 K + SGG+DS +S L+Q+ G +V L + L Q ++G Sbjct: 2 KALALFSGGLDSLLSMKLIQEMGIEVVALHFNI-------GFGANRDKLEYLQNATAQIG 54 Query: 67 IELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGADYIAT 126 +EL ++ ++++ V F + G+ NP I C+ + F+ L + GA +I + Sbjct: 55 VELRVLDIQEQFFNEVL--FNPVHGYGKYFNPCIDCHANM-FRHALRLLEGE-GASFIIS 110 Query: 127 GHYVRRADVDGK 138 G + + + Sbjct: 111 GEVIGQRPKSQR 122 >UniRef50_A9A2U4 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase n=2 Tax=Thaumarchaeota RepID=A9A2U4_NITMS Length = 337 Score = 85.2 bits (210), Expect = 3e-15, Method: Composition-based stats. Identities = 64/341 (18%), Positives = 126/341 (36%), Gaps = 62/341 (18%) Query: 1 MSETA--KKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKN-WEEDDGEEYCTAAADLAD 57 M+E KKV+ +SGG+DS ++ ++Q+QG+ V + +K + + D C Sbjct: 1 MTEEKEKKKVVALLSGGLDSQLAVRMMQEQGFDVSAVAIKTPFCDFDCGRGCGFEI---- 56 Query: 58 AQAVCDKLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAE 117 + D L + L TV EY + + ++ G NP I C + F A + E Sbjct: 57 -RERADDLNVNLKTVYLGDEYIEMLKNP---KHGIGAGFNPCIDCRAMM-FDA-AKKHME 110 Query: 118 DLGADYIATGHYVRRADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFP-------- 169 ++GA++I +G + + + LR + + +S + + ++ +L P Sbjct: 111 EIGAEFIVSGEVLGQRPMSQHRPALRTI---EKESDLVGKIVRP-LSAALLPETIPEKEG 166 Query: 170 ------VG---ELEKPQVRKIAEDLGLVTAKKKDSTGICFIGERKF---REFLGRYLPAQ 217 +G + +A+ G+ ++ G C + E +F + L ++ Sbjct: 167 LIKRENLGMIRGRTRRNQLDMAKQYGIE--NPPNAGGGCLLTEPQFGIKAKDLFNHVENP 224 Query: 218 PGKIITVDGDEIGEHQGLMYHTLGQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGH 277 I +D +IG H EE +VV ++ + N ++ A Sbjct: 225 T--INDIDLLKIGRH-------------------FRLDEETKFVVGRNKDENEMIKAIAL 263 Query: 278 EHPRLMSVGLIAQQLHWVDREPFTGT--MRCTVKTRYRQTD 316 + L+ + + V RY Sbjct: 264 PNDILLEAKDHVGPTSILRGKNAKDHTKFAAAVTLRYSDAP 304 >UniRef50_A5G9E7 Thiamine biosynthesis protein n=4 Tax=Bacteria RepID=A5G9E7_GEOUR Length = 334 Score = 85.2 bits (210), Expect = 4e-15, Method: Composition-based stats. Identities = 64/351 (18%), Positives = 119/351 (33%), Gaps = 65/351 (18%) Query: 5 AKKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFM--KNWEEDDGEEYCTAAADLADAQAVC 62 KK + +SGG+DS+++ ++ +QG VE L C + A V Sbjct: 2 QKKALALLSGGLDSTLAVKVMLEQGIAVEALNFTSPFCTCTGKNSGCKSE-----AVRVA 56 Query: 63 DKLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAE---DL 119 ++ I + ++ EY + V + ++ G+ NP I C L A E + Sbjct: 57 EEFNIPIKVMHKGVEYLEIVGKP---KHGYGKGMNPCIDCRIF-----LLRKAKEYMAES 108 Query: 120 GADYIATGHYVRRADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPV--------- 170 GAD++ TG + + + + LR + +S L A+ P Sbjct: 109 GADFVITGEVLGQRPMSQRRDTLR---LIERESGLEGLLLRPLSAKHFNPTIPETEGWVD 165 Query: 171 --------GELEKPQVRKIAEDLGLVTAKKKDSTGICFIGERKFREFLGRYLP-AQPGKI 221 G K Q+ ++A+DL + G C + E F + + + Sbjct: 166 RERLLAIQGRSRKEQM-QLADDLDVKNYPCP--AGGCLLTELSFVSKVKDVFDHSDTLNL 222 Query: 222 ITVDGDEIGEHQGLMYHTLGQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPR 281 ++G H +G R +V ++ N ++ Sbjct: 223 RDFRLLKLGRH-----FRIGSRTKA--------------IVGRNEAENNVLETAVQAGEA 263 Query: 282 LMSVGLIAQQLHWVDREPFTGTMRCTVKT--RYR--QTDIPCTVKALDDDR 328 ++ + L V + + K RY + CT+K + D R Sbjct: 264 ILRWDEGSSPLTVVMGKLDDTKLENAAKILLRYTRAEPGQECTIKFVIDSR 314 >UniRef50_B2VAD6 Thiamine biosynthesis protein n=6 Tax=Aquificales RepID=B2VAD6_SULSY Length = 355 Score = 84.8 bits (209), Expect = 5e-15, Method: Composition-based stats. Identities = 57/273 (20%), Positives = 102/273 (37%), Gaps = 53/273 (19%) Query: 5 AKKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWE--EDDGEEYCTAAAD----LADA 58 +K + SGG+DS+++ L+Q QG V L + D + A Sbjct: 2 KRKAVALYSGGLDSTLAIKLVQNQGIDVLALHFYTGFCITETKRRRGEKKEDGSHYMNPA 61 Query: 59 QAVCDKLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAED 118 K G L V+ + Y D + +Y G NP I C + FK + ++ Sbjct: 62 LKYAAKYGFPLEIVDISDGYMDVILNP---KYGYGANINPCIDCRIYM-FKK-AKEIMQE 116 Query: 119 LGADYIATGHYVRRADVDGKS--------------RLLRGLDSNKDQSYFL--------Y 156 +GAD++ +G + + KS +LR L + K L Sbjct: 117 VGADFVISGEVLGQRPKSQKSIPLKIIEKESGLEGLILRPLSAKK-----LPPTIPEING 171 Query: 157 TLSHEQIAQSLFPVGELEKPQVRKIAEDLGLVTAKKKDSTGICFIGERKFREFLGRYLPA 216 + E++ VG K Q+ ++A++L + + + G C++ + + + Sbjct: 172 WVDREKLEGI---VGRSRKRQI-ELAKELEIDEYESP-AGGCCYLTDENYAYKYKETMEI 226 Query: 217 QPGKIITVDGDEIGEHQGLMYHTLGQRKGLGIG 249 + GKI D L+ T+G+ L G Sbjct: 227 E-GKITQDD---------LVLFTVGRHFRLDSG 249 >UniRef50_A2BJ08 Predicted ATPase of the PP-loop superfamily n=1 Tax=Hyperthermus butylicus DSM 5456 RepID=A2BJ08_HYPBU Length = 341 Score = 84.8 bits (209), Expect = 5e-15, Method: Composition-based stats. Identities = 52/229 (22%), Positives = 85/229 (37%), Gaps = 41/229 (17%) Query: 7 KVIVGMSGGVDSSVSAW----LLQQQGYQVEGLFMKNWEEDDGEEYCTAAADLADAQAVC 62 K++V +SGG DS+V+ L ++ G +V + ++ + +A +++C Sbjct: 65 KILVAISGGKDSAVTLAALSDLAKKYGIEVYAIHLRLGFGE------FSAKVEERVRSLC 118 Query: 63 DKLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGAD 122 + LGI V+ A V + + R P +C +K + FL +A +LGAD Sbjct: 119 NMLGIPCIVVDVAEA----VGDPVHILARKARRPA-CSVC-GLVK-RYFLNASAIELGAD 171 Query: 123 YIATGHYVRRADVDGKSRLLRGLDSNKDQSYFLYTLSH-----EQIAQSLF-PVGE-LEK 175 Y+A GH L D L + +A + P+ E EK Sbjct: 172 YVALGHNADDIIAYSIKAFLN-QDLE-----ALAKFGPVTTSIDDLAVARLRPLYEVYEK 225 Query: 176 PQVRKIAEDLGLVTAKKKDSTGIC-FIGERKFREFLGRYL----PAQPG 219 V A GL K C F E + + + PG Sbjct: 226 EDVL-YAILRGLPVVFDK-----CPFRPEAPMEDTIKEMINKLEDKHPG 268 >UniRef50_Q0W737 NH(3)-dependent NAD(+) synthetase n=2 Tax=Euryarchaeota RepID=Q0W737_UNCMA Length = 269 Score = 84.4 bits (208), Expect = 6e-15, Method: Composition-based stats. Identities = 44/194 (22%), Positives = 76/194 (39%), Gaps = 39/194 (20%) Query: 10 VGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYCTAAADLADAQAVCDKLGIEL 69 + +SGG+DS++ A L + V GL + + T D+ DA+ + +LGI+ Sbjct: 36 IALSGGIDSALVATLASRV-VDVYGLLL-------PDSASTTPEDMRDAELLAKELGIDC 87 Query: 70 HTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFL---EFAAEDLGADYIAT 126 + V ++ + G P L +K + + FAA G + T Sbjct: 88 EVIEIGDL----VQAVYDRRPRIG--PAECRLAYANVKPRMRMIVNYFAANLDGRVVLGT 141 Query: 127 GHYVRRADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQVRKIAEDLG 186 G NK + Y + + P+G+L K QVR++A+ L Sbjct: 142 G--------------------NKTELLMGYFTKYGDGGVDILPIGDLYKTQVRQMAKHLE 181 Query: 187 LVTA--KKKDSTGI 198 + A +K S G+ Sbjct: 182 VPAAIIEKPPSAGL 195 >UniRef50_O27554 Probable NH(3)-dependent NAD(+) synthetase n=5 Tax=cellular organisms RepID=NADE_METTH Length = 266 Score = 84.0 bits (207), Expect = 7e-15, Method: Composition-based stats. Identities = 53/198 (26%), Positives = 79/198 (39%), Gaps = 44/198 (22%) Query: 8 VIVGMSGGVDSSVSAWLLQQQ-GYQ-VEGLFMKNWEEDDGEEYCTAAADLADAQAVCDKL 65 V++G+SGGVDSS A+L G V GL M T DL A+ V D+L Sbjct: 31 VVLGLSGGVDSSTVAYLAVNALGPDRVLGLIM--------PSSTTPRDDLRHARTVADEL 82 Query: 66 GIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAF---LEFAAEDLGAD 122 GIE T++ + + + N + L +K +A L + A L Sbjct: 83 GIESETID---------IDPIIESLTGLCSHNANELALANLKPRARMVILYYHANSLNRL 133 Query: 123 YIATGHYVRRADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQVRKIA 182 TG+ ++ LL G Y + + P+G L K QVR++A Sbjct: 134 VAGTGN---------RTELLLG-----------YFTKYGDGGVDMLPIGGLYKGQVRELA 173 Query: 183 EDLGLVTA--KKKDSTGI 198 LG+ KK + G+ Sbjct: 174 GRLGVPPEIIKKPPTAGL 191 >UniRef50_D1JEE7 Probable NH(3)-dependent NAD(+) synthetase n=1 Tax=uncultured archaeon RepID=D1JEE7_9ARCH Length = 245 Score = 84.0 bits (207), Expect = 8e-15, Method: Composition-based stats. Identities = 52/200 (26%), Positives = 84/200 (42%), Gaps = 40/200 (20%) Query: 4 TAKKVIVGMSGGVDSSVSAWLLQQQ-GYQVEGLFMKNWEEDDGEEYCTAAADLADAQAVC 62 +A+ VI+GMSGG+DSSV+A L + GL M + + D+ + V Sbjct: 22 SAEGVILGMSGGLDSSVTAVLCKNAFPKSTLGLIMPCFSD---------PEDIEHVKQVA 72 Query: 63 DKLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDI-LCNKEIKFKAF-LEFAAEDLG 120 +K IE V+ + + L + E +T + DI N + + + L + A L Sbjct: 73 EKFDIETRKVDLSPVF------LTVLETLGSKTYDRDIATANLKPRLRMLVLYYFANKLN 126 Query: 121 ADYIATGHYVRRADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQVRK 180 + TG+ KS L+ G Y + L P+G+L K +VR Sbjct: 127 YLVVGTGN---------KSELMIG-----------YFTKYGDGGVDLLPLGDLLKTEVRA 166 Query: 181 IAEDLGLVTA--KKKDSTGI 198 +AE L + A + S G+ Sbjct: 167 LAEVLDIPKAIIEMPPSAGL 186 >UniRef50_A3DP41 NH(3)-dependent NAD(+) synthetase n=2 Tax=Archaea RepID=NADE_STAMF Length = 275 Score = 83.3 bits (205), Expect = 1e-14, Method: Composition-based stats. Identities = 48/195 (24%), Positives = 71/195 (36%), Gaps = 38/195 (19%) Query: 6 KKVIVGMSGGVDSSVSAWL-LQQQGYQ-VEGLFMKNWEEDDGEEYCTAAADLADAQAVCD 63 K ++G+SGGVDSSV+ L ++ G + V L M + T D+ DA + Sbjct: 34 KGAVIGLSGGVDSSVTLLLTMKAIGIERVTALIM-------PDTRVTPKRDIEDALWLVK 86 Query: 64 KLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGA-D 122 K GI+ + + + + Y A P N I A + Sbjct: 87 KYGIKYYVIR---------IDDIVDSYSA----MPFFNINYNIPTGNL--RARIRMNILY 131 Query: 123 YIATGHYVRRADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQVRKIA 182 Y A H +S +L G Y + + P+G L K QVRK+ Sbjct: 132 YYANLHNYIVVGTGDRSEILIG-----------YFTKYGDGGVDILPIGSLFKTQVRKMG 180 Query: 183 EDLGLV--TAKKKDS 195 + LGL K S Sbjct: 181 DYLGLPEKITSKPSS 195 >UniRef50_C5A5U2 Predicted ATPase of the PP-loop superfamily n=8 Tax=Thermococcaceae RepID=C5A5U2_THEGJ Length = 262 Score = 82.9 bits (204), Expect = 2e-14, Method: Composition-based stats. Identities = 40/192 (20%), Positives = 73/192 (38%), Gaps = 29/192 (15%) Query: 4 TAKKVIVGMSGGVDSSVSAWLLQQQGYQVEGL-FMKNWEEDDGEEYCTAAADLADAQAVC 62 T K+++V SGG DSS++ +LL++ G V L F W + L A Sbjct: 19 TDKRILVLFSGGKDSSLTLYLLKEAGLDVSALTFFHRW---------SWHETLRWAMKFT 69 Query: 63 DKLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGAD 122 KLG+E + V+ GR I C + + + A ++ A + G + Sbjct: 70 RKLGVEHYLVDITDGLLREAV---------GRKGPVCIHCKRVMLWNA--KWFALNNGFE 118 Query: 123 YIATGHYVRRADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQVRKIA 182 +A G + +G D L + + L P+ + +V ++A Sbjct: 119 ILAKGDNANDKIIGALLDQCKG-DIR------LCRIPRIGLP-ILRPLIKYTAEEVERLA 170 Query: 183 EDLGLVTAKKKD 194 E+ + + + Sbjct: 171 EEADVRPYRMYE 182 >UniRef50_B8D6R2 NAD+ synthetase n=1 Tax=Desulfurococcus kamchatkensis 1221n RepID=B8D6R2_DESK1 Length = 280 Score = 82.1 bits (202), Expect = 3e-14, Method: Composition-based stats. Identities = 63/289 (21%), Positives = 101/289 (34%), Gaps = 76/289 (26%) Query: 5 AKKVIVGMSGGVDSSVSAWLLQQQ-GYQ-VEGLFMKNWEEDDGEEYCTAAADLADAQAVC 62 AKK I+G+SGG+DSSV+ LL G V G+ M + T D+ DA + Sbjct: 38 AKKAIIGLSGGLDSSVTLRLLVDAVGSDRVIGVIM-------PDTRVTPTEDVDDAVELS 90 Query: 63 DKLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAF--------LEF 114 LG+E + + + Y+ P N+++ L + Sbjct: 91 RDLGVEYMIIP---------IDDVVNSYRV----IPGFDVNEKLSTGNLRARIRMNILYY 137 Query: 115 AAEDLGADYIATGHYVRRADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELE 174 A L I TG +S +L G Y + + P+ L Sbjct: 138 LANKLNGVVIGTG---------DRSEILLG-----------YFTKYGDGGVDVLPIACLY 177 Query: 175 KPQVRKIAEDLGLVT--AKKKDSTGICFIGERKFREFLGRYLPAQPGKIITVDGDEIGEH 232 K QV+++ LGL K S R +R+ L ++ Sbjct: 178 KTQVKEMGRYLGLPVRITSKPSS-------PRLWRDHLAEEELGLSYNMVD--------- 221 Query: 233 QGLMYHTLGQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPR 281 L++++L KGL + T P V +K +L + + H R Sbjct: 222 --LVFYSL-IDKGLSTEEAVDATGLPLNVFEK-----VLTLHRRSRHKR 262 >UniRef50_C0R008 Thiamine biosynthesis protein n=2 Tax=Brachyspira RepID=C0R008_BRAHW Length = 356 Score = 82.1 bits (202), Expect = 3e-14, Method: Composition-based stats. Identities = 48/193 (24%), Positives = 78/193 (40%), Gaps = 21/193 (10%) Query: 1 MSETAKKVIVGMSGGVDSSVSAWLLQQQGYQVEGL-FMKNWEEDDGEEYCTAAADLADAQ 59 MS+ K I+ +SGG+DS + +L+++ V L F+ E +E A+ Sbjct: 1 MSDKKAKAILLLSGGLDSMLVGAILKRENIDVLALRFVTGLEYAVIKEELLEIYSEDPAK 60 Query: 60 AVCDKLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDL 119 D L I + V+ Y D +Y G NP + C I + E+ Sbjct: 61 KAADFLNIPIRFVSLKDVYLDMFLNP---KYGYGSAINPCLDC--HILMLKTAKKIMEEE 115 Query: 120 GADYIATGHYVRRADVDGKSR-LLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQV 178 G D+IATG + + KS+ LL + +S L ++ L P+ K Sbjct: 116 GFDFIATGEVKGQRPMSQKSQDLLNAI----KESGLEGRLLRP-LSAKLLPI---TK--- 164 Query: 179 RKIAEDLGLVTAK 191 AE+ GL+ + Sbjct: 165 ---AEEEGLINRE 174 >UniRef50_B8CZD2 NH(3)-dependent NAD(+) synthetase n=4 Tax=Clostridia RepID=B8CZD2_HALOH Length = 247 Score = 81.0 bits (199), Expect = 6e-14, Method: Composition-based stats. Identities = 41/185 (22%), Positives = 73/185 (39%), Gaps = 39/185 (21%) Query: 8 VIVGMSGGVDSSVSAWLLQQQGYQ-VEGLFMKNWEEDDGEEYCTAAADLADAQAVCDKLG 66 +VGMSGG+DS+V++ L ++ + G+ M D DL DA+ V D Sbjct: 29 AVVGMSGGIDSAVTSVLCKKAFKENTLGIIMPCHSSD---------KDLEDARLVADAFD 79 Query: 67 IELHTVNFAAEYWDNVFELFLAEYKA-GRTPNPDILCN--KEIKFKAFLEFAAEDLGADY 123 I+ + VF+ F+ A +T + + N ++ +AA Sbjct: 80 IKYIVKDLGP-----VFDNFIELLGADSQTGDDMAVANIKPRLRMTTLYYYAAR------ 128 Query: 124 IATGHYVRRADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQVRKIAE 183 + L+ G D+ + + Y + + P+G L K +VR++A Sbjct: 129 --------------NNYLVVGTDNWSELT-VGYFTKYGDGGVDIAPLGRLVKTEVRELAR 173 Query: 184 DLGLV 188 LG+ Sbjct: 174 YLGIP 178 >UniRef50_A6UUS4 NH(3)-dependent NAD(+) synthetase n=12 Tax=Methanococcales RepID=NADE_META3 Length = 254 Score = 80.6 bits (198), Expect = 8e-14, Method: Composition-based stats. Identities = 48/200 (24%), Positives = 80/200 (40%), Gaps = 39/200 (19%) Query: 5 AKKVIVGMSGGVDSSVSAWL-LQQQGYQ-VEGLFMKNWEEDDGEEYCTAAADLADAQAVC 62 AK V++G+SGG+DSS+ A + ++ G V G+ M E + D A+ + Sbjct: 23 AKGVVLGLSGGIDSSLVATICVKALGKDNVLGVIM--------PEKNSNTQDKEHAELLA 74 Query: 63 DKLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNP--DILCNKEIKFKAFLEFAAEDLG 120 ++LGI+ + V + F A G P D + + +K Sbjct: 75 NQLGIKYTVSDITD-----VLKSFGAG---GYIPTKEFDKMADGNLK------PRIRMCI 120 Query: 121 ADYIATGHYVRRADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQVRK 180 Y A K+ LL SNK + Y Y + + +G L K +VR+ Sbjct: 121 LYYFA-----------NKNNLLVAGTSNKSEIYMGYGTKYGDLGSDFLLIGNLFKTEVRE 169 Query: 181 IAEDLGLVTA--KKKDSTGI 198 +++ LG+ K S G+ Sbjct: 170 LSKYLGVPDEIINKAPSAGL 189 >UniRef50_A8ACB5 NH(3)-dependent NAD(+) synthetase n=1 Tax=Ignicoccus hospitalis KIN4/I RepID=A8ACB5_IGNH4 Length = 275 Score = 80.6 bits (198), Expect = 8e-14, Method: Composition-based stats. Identities = 53/203 (26%), Positives = 77/203 (37%), Gaps = 51/203 (25%) Query: 3 ETAKKVIVGMSGGVDSSVSAWLLQQQ-GYQ-VEGLFMKNWEEDDGEEYCTAAADLADAQA 60 T + ++G+SGGVDS+V+A LL + G + V L + T D+ DA+ Sbjct: 27 RTGRVAVIGLSGGVDSAVTAALLSEALGPERVRALIL--------PSASTPEKDVEDAKR 78 Query: 61 VCDKLGIE-LHTVNFAAEYWDNVFELFL---AEYKAGRTPNPDILCNKEIKFKAFLEFAA 116 V LGIE + ++ F+ L G T I+ A Sbjct: 79 VARLLGIEDVRVIDVEPALRA--FDDLLKVDDRVVRGNTLA-------RIRMTILYAVAH 129 Query: 117 EDLGADYIATGHYVRRADVDGKSRLLRGLDSNKDQSYFL--YTLSHEQIAQSLFPVGELE 174 +D G + TG D+S FL Y +FP+G+L Sbjct: 130 KD-GI-VVGTG----------------------DKSEFLLGYFTKCGDGCADVFPIGDLY 165 Query: 175 KPQVRKIAEDLGLV--TAKKKDS 195 K VRK+A +GL A K S Sbjct: 166 KTWVRKLALHMGLPEDVALKPSS 188 >UniRef50_B5Y727 Conserved protein n=1 Tax=Coprothermobacter proteolyticus DSM 5265 RepID=B5Y727_COPPD Length = 341 Score = 80.6 bits (198), Expect = 8e-14, Method: Composition-based stats. Identities = 46/225 (20%), Positives = 81/225 (36%), Gaps = 35/225 (15%) Query: 3 ETAKKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYCTAAADLADAQAVC 62 + I +SGG+DS ++A L+ QG +V G+ + + + A+ Sbjct: 8 TNPIRAIALLSGGLDSMLAAKLILDQGIEVIGI-----------SFESPFFNADRARTAA 56 Query: 63 DKLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGAD 122 +L I L T + E + ++ GR NP I C+ + KA L A Sbjct: 57 KQLAIPLITWDITDELIKVLKNP---KHGFGRFFNPCIDCHALMVKKAL--ELLPSLQAQ 111 Query: 123 YIATGHYVRRADVDGKSRLLRGLDSNKD---QSYFLYTLSHEQI------------AQSL 167 +I TG + + K L + KD Q L LS + + L Sbjct: 112 FIITGEVLYQRPKSQKMGGLMAV--AKDSGAQDLILRPLSAKLLPPTKPEREGWVNRSLL 169 Query: 168 FPVGELEKPQVRKIAEDLGLVTAKKKDSTGICFIGERKFREFLGR 212 + + + ++A+ LG+ G C + + L + Sbjct: 170 LDIQGRSRQRQLELAQTLGINDYPMP--AGGCLLTDISVTRRLQK 212 Searching..................................................done Results from round 3 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_A1STI9 tRNA-specific 2-thiouridylase mnmA n=4 Tax=Prote... 484 e-135 UniRef50_D0X1F3 tRNA (5-methylaminomethyl-2-thiouridylate)-methy... 469 e-131 UniRef50_A6W0E1 tRNA-specific 2-thiouridylase mnmA n=20 Tax=Bact... 461 e-128 UniRef50_B1YTE9 tRNA-specific 2-thiouridylase mnmA n=310 Tax=cel... 456 e-127 UniRef50_Q6MA75 tRNA-specific 2-thiouridylase mnmA n=15 Tax=Bact... 436 e-121 UniRef50_B0U6Q7 tRNA-specific 2-thiouridylase mnmA n=7 Tax=Xylel... 433 e-120 UniRef50_D2RN19 tRNA(5-methylaminomethyl-2-thiouridylate)-methyl... 432 e-119 UniRef50_C3ZAA6 Putative uncharacterized protein n=1 Tax=Branchi... 427 e-118 UniRef50_D1SR18 tRNA (5-methylaminomethyl-2-thiouridylate)-methy... 427 e-118 UniRef50_Q4FSB4 tRNA-specific 2-thiouridylase mnmA n=635 Tax=Bac... 424 e-117 UniRef50_A5GE36 tRNA-specific 2-thiouridylase mnmA n=20 Tax=Bact... 423 e-117 UniRef50_A2SLT0 tRNA-specific 2-thiouridylase mnmA n=1 Tax=Methy... 422 e-117 UniRef50_C9KPU1 tRNA (5-methylaminomethyl-2-thiouridylate)-methy... 422 e-116 UniRef50_A8DJE2 tRNA (5-methylaminomethyl-2-thiouridylate)-methy... 421 e-116 UniRef50_A1WWV9 tRNA-specific 2-thiouridylase mnmA n=2 Tax=Bacte... 420 e-116 UniRef50_C0B5F7 Putative uncharacterized protein n=2 Tax=Lachnos... 420 e-116 UniRef50_B0K991 tRNA-specific 2-thiouridylase mnmA 2 n=9 Tax=Clo... 420 e-116 UniRef50_A6LSF2 tRNA-specific 2-thiouridylase mnmA n=19 Tax=Clos... 417 e-115 UniRef50_C0E8G4 Putative uncharacterized protein n=1 Tax=Clostri... 417 e-115 UniRef50_C0WCT5 Putative uncharacterized protein n=1 Tax=Acidami... 415 e-114 UniRef50_A5UV64 tRNA-specific 2-thiouridylase mnmA n=7 Tax=Bacte... 413 e-114 UniRef50_Q253W3 tRNA-specific 2-thiouridylase mnmA n=3 Tax=Chlam... 412 e-114 UniRef50_D0WIU4 tRNA (5-methylaminomethyl-2-thiouridylate)-methy... 412 e-113 UniRef50_C4ZB38 tRNA (5-methylaminomethyl-2-thiouridylate)-methy... 410 e-113 UniRef50_B0TFA7 tRNA-specific 2-thiouridylase mnmA n=97 Tax=Bact... 408 e-112 UniRef50_B5ZBP8 tRNA-specific 2-thiouridylase mnmA n=43 Tax=Bact... 405 e-111 UniRef50_Q1IPC9 tRNA-specific 2-thiouridylase mnmA n=2 Tax=Bacte... 403 e-111 UniRef50_Q2LWA6 tRNA-specific 2-thiouridylase mnmA 1 n=1 Tax=Syn... 402 e-110 UniRef50_Q3B625 tRNA-specific 2-thiouridylase mnmA n=10 Tax=Chlo... 402 e-110 UniRef50_B7J5X6 tRNA-specific 2-thiouridylase mnmA n=3 Tax=Acidi... 401 e-110 UniRef50_B0MKE4 Putative uncharacterized protein n=3 Tax=Clostri... 400 e-110 UniRef50_C9LN41 tRNA (5-methylaminomethyl-2-thiouridylate)-methy... 399 e-109 UniRef50_O75648 Mitochondrial tRNA-specific 2-thiouridylase 1 n=... 398 e-109 UniRef50_Q503J2 Mitochondrial tRNA-specific 2-thiouridylase 1 n=... 397 e-109 UniRef50_C2KV29 tRNA (5-methylaminomethyl-2-thiouridylate)-methy... 396 e-109 UniRef50_UPI00016B2149 tRNA (5-methylaminomethyl-2-thiouridylate... 395 e-108 UniRef50_B3DUT9 tRNA(5-methylaminomethyl-2-thiouridine)-methyltr... 395 e-108 UniRef50_A9SZR3 Predicted protein n=1 Tax=Physcomitrella patens ... 394 e-108 UniRef50_B5YCZ9 tRNA (5-methylaminomethyl-2-thiouridylate)-methy... 393 e-108 UniRef50_B4D711 tRNA (5-methylaminomethyl-2-thiouridylate)-methy... 393 e-108 UniRef50_D0LWB4 tRNA(5-methylaminomethyl-2-thiouridylate)-methyl... 391 e-107 UniRef50_B5DNY9 GA22395 n=14 Tax=Neoptera RepID=B5DNY9_DROPS 390 e-107 UniRef50_B7PXE7 tRNA (5-methylaminomethyl-2-thiouridylate)-methy... 390 e-107 UniRef50_B1VAX7 tRNA-specific 2-thiouridylase mnmA n=4 Tax=Bacte... 388 e-106 UniRef50_A5FHA9 tRNA-specific 2-thiouridylase mnmA n=26 Tax=Bact... 388 e-106 UniRef50_C7N321 tRNA (5-methylaminomethyl-2-thiouridylate)-methy... 388 e-106 UniRef50_Q2RZN9 tRNA-specific 2-thiouridylase mnmA n=11 Tax=Bact... 388 e-106 UniRef50_C1XSA6 tRNA (5-methylaminomethyl-2-thiouridylate)-methy... 387 e-106 UniRef50_B8FEQ6 tRNA (5-methylaminomethyl-2-thiouridylate)-methy... 386 e-106 UniRef50_D2MI59 tRNA (5-methylaminomethyl-2-thiouridylate)-methy... 385 e-105 UniRef50_B0DQ81 Predicted protein n=4 Tax=Basidiomycota RepID=B0... 383 e-105 UniRef50_B9CP36 tRNA (5-methylaminomethyl-2-thiouridylate)-methy... 383 e-105 UniRef50_Q3Z8D8 tRNA-specific 2-thiouridylase mnmA n=5 Tax=Dehal... 381 e-104 UniRef50_D1BMF0 tRNA(5-methylaminomethyl-2-thiouridylate)-methyl... 381 e-104 UniRef50_A0LEL7 tRNA-specific 2-thiouridylase mnmA n=1 Tax=Syntr... 381 e-104 UniRef50_B8P9F0 Predicted protein n=1 Tax=Postia placenta Mad-69... 381 e-104 UniRef50_B1AJ41 tRNA-specific 2-thiouridylase mnmA n=13 Tax=Moll... 381 e-104 UniRef50_C9RAV2 tRNA (5-methylaminomethyl-2-thiouridylate)-methy... 380 e-104 UniRef50_UPI000197B781 hypothetical protein BACCOPRO_02286 n=1 T... 378 e-103 UniRef50_B3RIL6 Putative uncharacterized protein n=1 Tax=Trichop... 377 e-103 UniRef50_D2QHY9 tRNA(5-methylaminomethyl-2-thiouridylate)-methyl... 377 e-103 UniRef50_UPI00016C4B95 tRNA (5-methylaminomethyl-2-thiouridylate... 376 e-103 UniRef50_B1ZZ32 tRNA-specific 2-thiouridylase mnmA n=3 Tax=Verru... 376 e-103 UniRef50_Q4SDW3 Chromosome undetermined SCAF14629, whole genome ... 376 e-103 UniRef50_C1A7G2 tRNA-specific 2-thiouridylase MnmA n=1 Tax=Gemma... 375 e-102 UniRef50_C5CIB3 tRNA (5-methylaminomethyl-2-thiouridylate)-methy... 375 e-102 UniRef50_Q4A7U1 tRNA-specific 2-thiouridylase mnmA n=5 Tax=Molli... 375 e-102 UniRef50_Q73PV6 tRNA-specific 2-thiouridylase mnmA n=2 Tax=Trepo... 375 e-102 UniRef50_C5MCB7 Putative uncharacterized protein n=1 Tax=Candida... 374 e-102 UniRef50_B2UPK4 tRNA-specific 2-thiouridylase mnmA n=1 Tax=Akker... 374 e-102 UniRef50_Q9W5B6 Mitochondrial tRNA-specific 2-thiouridylase 1 n=... 373 e-102 UniRef50_Q057R1 tRNA-specific 2-thiouridylase mnmA n=6 Tax=Enter... 373 e-102 UniRef50_Q1J090 tRNA-specific 2-thiouridylase mnmA n=5 Tax=Deino... 372 e-102 UniRef50_B5YGH6 tRNA (5-methylaminomethyl-2-thiouridylate)-methy... 372 e-102 UniRef50_Q0F280 TRNA (5-methylaminomethyl-2-thiouridylate)-methy... 372 e-101 UniRef50_A6KZ28 tRNA-specific 2-thiouridylase mnmA 2 n=10 Tax=Ba... 372 e-101 UniRef50_A7HCV7 tRNA-specific 2-thiouridylase mnmA n=1 Tax=Anaer... 370 e-101 UniRef50_UPI000180C35A PREDICTED: similar to tRNA 5-methylaminom... 370 e-101 UniRef50_Q9SYD2 F11M15.16 protein n=14 Tax=Magnoliophyta RepID=Q... 370 e-101 UniRef50_B0SG84 tRNA-specific 2-thiouridylase mnmA n=6 Tax=Lepto... 369 e-101 UniRef50_B2IBH3 tRNA-specific 2-thiouridylase mnmA n=141 Tax=roo... 369 e-101 UniRef50_B9GF12 Predicted protein n=6 Tax=Viridiplantae RepID=B9... 368 e-100 UniRef50_Q6MLR7 tRNA-specific 2-thiouridylase mnmA n=1 Tax=Bdell... 368 e-100 UniRef50_Q17440 Probable mitochondrial tRNA-specific 2-thiouridy... 368 e-100 UniRef50_A8X0Z8 Putative uncharacterized protein n=2 Tax=Caenorh... 367 e-100 UniRef50_Q5PBB1 tRNA-specific 2-thiouridylase mnmA n=21 Tax=cell... 366 e-100 UniRef50_Q7TTZ4 tRNA-specific 2-thiouridylase mnmA n=2 Tax=Planc... 366 e-100 UniRef50_Q6BSZ3 DEHA2D04818p n=6 Tax=Saccharomycetales RepID=Q6B... 366 e-99 UniRef50_A9A0S9 tRNA-specific 2-thiouridylase mnmA n=1 Tax=Desul... 365 2e-99 UniRef50_C1ZEX9 tRNA (5-methylaminomethyl-2-thiouridylate)-methy... 365 2e-99 UniRef50_B1GZY9 tRNA-specific 2-thiouridylase mnmA n=2 Tax=Elusi... 365 2e-99 UniRef50_A1BI85 tRNA-specific 2-thiouridylase mnmA n=2 Tax=Chlor... 365 2e-99 UniRef50_C0QRH5 tRNA-specific 2-thiouridylase mnmA n=8 Tax=Aquif... 365 2e-99 UniRef50_B9WA49 tRNA (5-methylaminomethyl-2-thiouridylate)-methy... 365 2e-99 UniRef50_O13947 Mitochondrial tRNA-specific 2-thiouridylase 1 n=... 364 4e-99 UniRef50_A6KZV1 tRNA-specific 2-thiouridylase mnmA 3 n=23 Tax=Ba... 364 4e-99 UniRef50_Q5L8X6 tRNA-specific 2-thiouridylase mnmA 3 n=6 Tax=Bac... 364 4e-99 UniRef50_B1I677 tRNA-specific 2-thiouridylase mnmA n=1 Tax=Candi... 363 7e-99 UniRef50_Q1NYA2 TRNA (5-methylaminomethyl-2-thiouridylate)-methy... 363 8e-99 UniRef50_C9RNM8 tRNA (5-methylaminomethyl-2-thiouridylate)-methy... 361 2e-98 UniRef50_Q0SMH1 tRNA-specific 2-thiouridylase mnmA n=25 Tax=Bact... 361 2e-98 UniRef50_C0QG63 tRNA (5-methylaminomethyl-2-thiouridylate)-methy... 361 3e-98 UniRef50_A2CB44 tRNA-specific 2-thiouridylase mnmA n=60 Tax=cell... 361 3e-98 UniRef50_D1N0N9 tRNA (5-methylaminomethyl-2-thiouridylate)-methy... 360 4e-98 UniRef50_B7G8R2 Predicted protein (Fragment) n=1 Tax=Phaeodactyl... 360 4e-98 UniRef50_Q7NBZ0 tRNA-specific 2-thiouridylase mnmA n=6 Tax=cellu... 360 4e-98 UniRef50_Q6C0F9 YALI0F25069p n=1 Tax=Yarrowia lipolytica RepID=Q... 360 4e-98 UniRef50_A9EXM5 tRNA-specific 2-thiouridylase mnmA n=4 Tax=Myxoc... 360 6e-98 UniRef50_B3JKC8 Putative uncharacterized protein n=2 Tax=Bactero... 359 1e-97 UniRef50_A8Z5W4 tRNA-specific 2-thiouridylase mnmA n=1 Tax=Candi... 357 3e-97 UniRef50_Q0ARV1 tRNA-specific 2-thiouridylase mnmA n=67 Tax=Alph... 357 4e-97 UniRef50_C4QX90 tRNA-specific 2-thiouridylase, responsible for 2... 357 4e-97 UniRef50_A6LIF1 tRNA-specific 2-thiouridylase mnmA n=28 Tax=Bact... 356 7e-97 UniRef50_D2V0M5 Predicted protein n=1 Tax=Naegleria gruberi RepI... 356 7e-97 UniRef50_Q5LIS5 tRNA-specific 2-thiouridylase mnmA 1 n=5 Tax=Bac... 356 7e-97 UniRef50_A4SBE4 Predicted protein n=2 Tax=Ostreococcus RepID=A4S... 355 1e-96 UniRef50_UPI000069DE11 tRNA (5-methylaminomethyl-2-thiouridylate... 355 1e-96 UniRef50_C7MLV9 tRNA (5-methylaminomethyl-2-thiouridylate)-methy... 355 1e-96 UniRef50_Q1AWB1 tRNA-specific 2-thiouridylase mnmA n=1 Tax=Rubro... 354 2e-96 UniRef50_Q8R5X3 tRNA-specific 2-thiouridylase mnmA 1 n=16 Tax=Fu... 354 2e-96 UniRef50_B8CCP6 tRNA-methyltransferase (Fragment) n=1 Tax=Thalas... 354 3e-96 UniRef50_A5IJQ4 tRNA-specific 2-thiouridylase mnmA n=7 Tax=Therm... 354 4e-96 UniRef50_A9BIS3 tRNA-specific 2-thiouridylase mnmA n=1 Tax=Petro... 351 3e-95 UniRef50_C4F7E5 Putative uncharacterized protein n=2 Tax=Collins... 350 4e-95 UniRef50_D1PXB9 tRNA (5-methylaminomethyl-2-thiouridylate)-methy... 349 6e-95 UniRef50_C8WLL2 tRNA(5-methylaminomethyl-2-thiouridylate)-methyl... 349 9e-95 UniRef50_P75365 tRNA-specific 2-thiouridylase mnmA n=2 Tax=Mycop... 349 1e-94 UniRef50_Q6AIZ6 tRNA-specific 2-thiouridylase mnmA n=1 Tax=Desul... 349 1e-94 UniRef50_A8SJM7 Putative uncharacterized protein n=1 Tax=Parvimo... 348 1e-94 UniRef50_C8W7A2 tRNA(5-methylaminomethyl-2-thiouridylate)-methyl... 348 2e-94 UniRef50_D0ND99 tRNA-specific 2-thiouridylase mnmA, putative n=1... 348 2e-94 UniRef50_C3J919 tRNA (5-methylaminomethyl-2-thiouridylate)-methy... 348 2e-94 UniRef50_B9L801 tRNA (5-methylaminomethyl-2-thiouridylate)-methy... 347 4e-94 UniRef50_Q12093 Mitochondrial tRNA-specific 2-thiouridylase 1 n=... 346 5e-94 UniRef50_A8F5H8 tRNA-specific 2-thiouridylase mnmA n=3 Tax=Therm... 346 6e-94 UniRef50_Q8A2F1 tRNA-specific 2-thiouridylase mnmA 2 n=8 Tax=Bac... 346 6e-94 UniRef50_D1XXK1 tRNA (5-methylaminomethyl-2-thiouridylate)-methy... 346 8e-94 UniRef50_C9RQ01 tRNA (5-methylaminomethyl-2-thiouridylate)-methy... 346 8e-94 UniRef50_B2RHP0 tRNA-specific 2-thiouridylase mnmA n=5 Tax=Bacte... 345 1e-93 UniRef50_A6Q239 tRNA-specific 2-thiouridylase mnmA n=2 Tax=Epsil... 343 8e-93 UniRef50_A7ANM3 tRNA methyl transferase family protein n=1 Tax=B... 339 7e-92 UniRef50_C7NES3 tRNA(5-methylaminomethyl-2-thiouridylate)-methyl... 339 1e-91 UniRef50_B1VZW7 tRNA-specific 2-thiouridylase mnmA n=44 Tax=Acti... 336 6e-91 UniRef50_B5Y9X9 tRNA (5-methylaminomethyl-2-thiouridylate)-methy... 334 2e-90 UniRef50_B0VEY5 tRNA (5-methylaminomethyl-2-thiouridylate)-methy... 334 2e-90 UniRef50_C5DEF9 KLTH0C08844p n=2 Tax=Saccharomycetaceae RepID=C5... 334 3e-90 UniRef50_D1BVV4 tRNA(5-methylaminomethyl-2-thiouridylate)-methyl... 334 4e-90 UniRef50_C0QYI3 tRNA (5-methylaminomethyl-2-thiouridylate)-methy... 333 6e-90 UniRef50_B7AL92 Putative uncharacterized protein n=3 Tax=Bactero... 332 1e-89 UniRef50_A5FZD5 tRNA-specific 2-thiouridylase mnmA n=2 Tax=Prote... 329 8e-89 UniRef50_C9L0F1 tRNA (5-methylaminomethyl-2-thiouridylate)-methy... 328 1e-88 UniRef50_D2NS67 Predicted tRNA methyltransferase n=4 Tax=Actinom... 328 3e-88 UniRef50_Q2LVR6 tRNA-specific 2-thiouridylase mnmA 2 n=1 Tax=Syn... 327 3e-88 UniRef50_A6NQI9 Putative uncharacterized protein n=1 Tax=Bactero... 327 4e-88 UniRef50_A8ES35 tRNA-specific 2-thiouridylase mnmA 1 n=5 Tax=Eps... 327 4e-88 UniRef50_Q313S6 tRNA-specific 2-thiouridylase mnmA n=7 Tax=Desul... 326 7e-88 UniRef50_Q5K850 tRNA (5-methylaminomethyl-2-thiouridylate)-methy... 326 1e-87 UniRef50_C7LUQ7 tRNA(5-methylaminomethyl-2-thiouridylate)-methyl... 323 6e-87 UniRef50_Q9ZJQ0 tRNA-specific 2-thiouridylase mnmA n=22 Tax=Camp... 322 1e-86 UniRef50_C7GYK6 tRNA (5-methylaminomethyl-2-thiouridylate)-methy... 321 2e-86 UniRef50_Q8R5Z5 tRNA-specific 2-thiouridylase mnmA 2 n=12 Tax=Fu... 321 2e-86 UniRef50_B1VFZ9 tRNA-specific 2-thiouridylase mnmA n=65 Tax=Bact... 321 2e-86 UniRef50_Q7U320 tRNA-specific 2-thiouridylase mnmA n=3 Tax=Helic... 321 3e-86 UniRef50_C7QYX8 tRNA (5-methylaminomethyl-2-thiouridylate)-methy... 321 3e-86 UniRef50_B2GL48 tRNA-specific 2-thiouridylase mnmA n=6 Tax=Micro... 321 3e-86 UniRef50_C0GTF7 tRNA (5-methylaminomethyl-2-thiouridylate)-methy... 320 4e-86 UniRef50_Q1MRW7 tRNA-specific 2-thiouridylase mnmA n=1 Tax=Lawso... 319 7e-86 UniRef50_B9L0K7 tRNA methyl transferase n=2 Tax=Thermomicrobia (... 319 1e-85 UniRef50_Q54I63 Mitochondrial tRNA-specific 2-thiouridylase 1 n=... 319 1e-85 UniRef50_D1PL47 tRNA (5-methylaminomethyl-2-thiouridylate)-methy... 319 1e-85 UniRef50_A5E201 Putative uncharacterized protein n=1 Tax=Loddero... 318 2e-85 UniRef50_A7ZEK1 tRNA-specific 2-thiouridylase mnmA n=4 Tax=Campy... 318 3e-85 UniRef50_A7I2L9 tRNA-specific 2-thiouridylase mnmA n=19 Tax=Camp... 314 2e-84 UniRef50_C1FJ72 Predicted protein n=1 Tax=Micromonas sp. RCC299 ... 313 7e-84 UniRef50_C9M7Q8 tRNA (5-methylaminomethyl-2-thiouridylate)-methy... 313 9e-84 UniRef50_D2L5P8 tRNA (5-methylaminomethyl-2-thiouridylate)-methy... 312 1e-83 UniRef50_C2BUX5 tRNA (5-methylaminomethyl-2-thiouridylate)-methy... 312 1e-83 UniRef50_C6BSG5 tRNA (5-methylaminomethyl-2-thiouridylate)-methy... 311 2e-83 UniRef50_UPI0001C3185B tRNA(5-methylaminomethyl-2-thiouridylate)... 310 7e-83 UniRef50_UPI0001BC5A6B tRNA (5-methylaminomethyl-2-thiouridylate... 309 8e-83 UniRef50_B8LDI7 Predicted protein (Fragment) n=1 Tax=Thalassiosi... 309 1e-82 UniRef50_D1B719 tRNA(5-methylaminomethyl-2-thiouridylate)-methyl... 304 2e-81 UniRef50_B6WY81 Putative uncharacterized protein n=1 Tax=Desulfo... 304 3e-81 UniRef50_C1TMD1 Predicted tRNA(5-methylaminomethyl-2-thiouridyla... 301 2e-80 UniRef50_C1EG18 Predicted protein (Fragment) n=2 Tax=Micromonas ... 297 4e-79 UniRef50_D1Y320 tRNA methyl transferase n=1 Tax=Pyramidobacter p... 296 8e-79 UniRef50_C0A9P4 tRNA (5-methylaminomethyl-2-thiouridylate)-methy... 294 3e-78 UniRef50_C6HVS1 tRNA (5-methylaminomethyl-2-thiouridylate)-methy... 291 2e-77 UniRef50_B6JVF0 tRNA (5-methylaminomethyl-2-thiouridylate)-methy... 291 3e-77 UniRef50_C7M0G9 tRNA(5-methylaminomethyl-2-thiouridylate)-methyl... 289 8e-77 UniRef50_B7G4M7 Predicted protein (Fragment) n=1 Tax=Phaeodactyl... 285 2e-75 UniRef50_Q4UE41 Trna methyl transferase, putative n=2 Tax=Theile... 284 3e-75 UniRef50_A9V8Y1 Predicted protein n=1 Tax=Monosiga brevicollis R... 281 2e-74 UniRef50_B0MXW7 Putative uncharacterized protein n=1 Tax=Alistip... 277 3e-73 UniRef50_Q3DBK5 TRNA methyl transferase (Fragment) n=5 Tax=cellu... 274 4e-72 UniRef50_B6AN65 tRNA (5-methylaminomethyl-2-thiouridylate)-methy... 272 1e-71 UniRef50_B8IYA5 tRNA (5-methylaminomethyl-2-thiouridylate)-methy... 271 4e-71 UniRef50_A8NDW7 Putative uncharacterized protein n=1 Tax=Coprino... 266 8e-70 UniRef50_C4QP81 tRNA(5-methylaminomethyl-2-thiouridylate)-methy ... 266 1e-69 UniRef50_B6KA02 tRNA methyltransferase domain-containing protein... 203 9e-51 UniRef50_C7LK58 tRNA (5-methylaminomethyl-2-thiouridylate)-methy... 203 1e-50 UniRef50_A6BB58 3-oxoacyl-[acyl-carrier-protein] synthase 1 (Fra... 188 3e-46 UniRef50_C1SG69 Predicted tRNA(5-methylaminomethyl-2-thiouridyla... 180 8e-44 UniRef50_Q4QIT1 TRNA-methyl transferase, putative n=4 Tax=Leishm... 174 5e-42 UniRef50_C1SG68 Predicted tRNA(5-methylaminomethyl-2-thiouridyla... 173 8e-42 UniRef50_Q7X189 Lfe204p1 (Fragment) n=1 Tax=Leptospirillum ferro... 172 2e-41 UniRef50_C9ZUV8 tRNA-methyl transferase, putative n=2 Tax=Trypan... 172 3e-41 UniRef50_Q5DCM7 SJCHGC00881 protein n=2 Tax=Schistosoma japonicu... 165 3e-39 UniRef50_C9R7K7 Thiamine biosynthesis protein-like protein n=1 T... 150 5e-35 UniRef50_C7R8C6 tRNA(5-methylaminomethyl-2-thiouridylate)-methyl... 150 8e-35 UniRef50_A0LCE2 Putative uncharacterized protein n=1 Tax=Magneto... 146 8e-34 UniRef50_A5KCE1 tRNA methyl transferase, putative n=1 Tax=Plasmo... 146 9e-34 UniRef50_B3L1V6 tRNA methyl transferase, putative n=1 Tax=Plasmo... 145 2e-33 UniRef50_Q4Y1X1 Putative uncharacterized protein (Fragment) n=1 ... 141 3e-32 UniRef50_Q3AD57 Putative uncharacterized protein n=1 Tax=Carboxy... 141 3e-32 UniRef50_A0LH53 Putative tRNA (5-methylaminomethyl-2-thiouridyla... 141 5e-32 UniRef50_A5G9E7 Thiamine biosynthesis protein n=4 Tax=Bacteria R... 140 6e-32 UniRef50_A9A2U4 tRNA (5-methylaminomethyl-2-thiouridylate)-methy... 139 1e-31 UniRef50_B5YF97 tRNA methyl transferase n=1 Tax=Dictyoglomus the... 136 1e-30 UniRef50_B9LAC4 Thiamine biosynthesis protein:ExsB n=2 Tax=Nauti... 136 1e-30 UniRef50_Q3AD58 Putative uncharacterized protein n=1 Tax=Carboxy... 135 3e-30 UniRef50_B3T5L4 Putative uncharacterized protein n=2 Tax=environ... 133 1e-29 UniRef50_A1AMX6 Thiamine biosynthesis protein n=4 Tax=Desulfurom... 133 1e-29 UniRef50_UPI000197A71F tRNA-specific 2-thiouridylase MnmA n=1 Ta... 132 2e-29 UniRef50_B2VAD6 Thiamine biosynthesis protein n=6 Tax=Aquificale... 131 3e-29 UniRef50_B2TJM2 Argininosuccinate synthase n=30 Tax=Bacteria Rep... 130 6e-29 UniRef50_Q0AXT2 Putative uncharacterized protein n=1 Tax=Syntrop... 130 6e-29 UniRef50_A7H7A3 Thiamine biosynthesis protein n=7 Tax=Bacteria R... 128 3e-28 UniRef50_Q1K1V6 Thiamine biosynthesis protein n=2 Tax=Desulfurom... 128 4e-28 UniRef50_A5TXN2 tRNA (5-methylaminomethyl-2-thiouridylate)-methy... 125 4e-27 UniRef50_B5YHJ9 Conserved protein n=1 Tax=Thermodesulfovibrio ye... 124 7e-27 UniRef50_C9RAR5 PP-loop domain protein n=10 Tax=Clostridia RepID... 121 4e-26 UniRef50_Q2LUM8 Putative tRNA (5-methylaminomethyl-2-thiouridyla... 121 5e-26 UniRef50_B3SFT2 Putative uncharacterized protein (Fragment) n=1 ... 120 8e-26 UniRef50_C0R008 Thiamine biosynthesis protein n=2 Tax=Brachyspir... 120 9e-26 UniRef50_D1JFA0 Putative uncharacterized protein n=1 Tax=uncultu... 120 1e-25 UniRef50_C0QKU7 Putative tRNA, (5-methylaminomethyl-2-thiouridyl... 119 1e-25 UniRef50_UPI000185D146 tRNA(Ile)-lysidine synthetase n=1 Tax=Cap... 119 2e-25 UniRef50_C6HXU2 Thiamine biosynthesis protein n=1 Tax=Leptospiri... 119 2e-25 UniRef50_C6J5B9 tRNA(Ile)-lysidine synthetase n=1 Tax=Paenibacil... 118 2e-25 UniRef50_A7H5Y0 Thiamine biosynthesis protein:ExsB n=29 Tax=Epsi... 118 2e-25 UniRef50_C5A2M0 PP-loop ATPase, YdaO-type n=8 Tax=Thermococcacea... 117 5e-25 UniRef50_B2RMB4 tRNA(Ile)-lysidine synthase n=2 Tax=Porphyromona... 117 6e-25 UniRef50_UPI000197B80A hypothetical protein BACCOPRO_00592 n=2 T... 117 6e-25 UniRef50_C6A3M7 ATPase, PP-loop superfamily n=2 Tax=Euryarchaeot... 116 9e-25 UniRef50_Q7M837 TRNA METHYLTRANSFERASE n=6 Tax=Helicobacteraceae... 116 1e-24 UniRef50_A8W1X2 ATPase of the PP-loop superfamily implicated in ... 116 1e-24 UniRef50_C9LEK3 tRNA(Ile)-lysidine synthase n=1 Tax=Prevotella t... 115 2e-24 UniRef50_UPI0001902279 tRNA (5-methylaminomethyl-2-thiouridylate... 115 3e-24 UniRef50_C9MRP4 tRNA(Ile)-lysidine synthase n=1 Tax=Prevotella v... 115 4e-24 Sequences not found previously or not previously below threshold: >UniRef50_A1STI9 tRNA-specific 2-thiouridylase mnmA n=4 Tax=Proteobacteria RepID=MNMA_PSYIN Length = 367 Score = 484 bits (1247), Expect = e-135, Method: Composition-based stats. Identities = 278/365 (76%), Positives = 309/365 (84%), Gaps = 1/365 (0%) Query: 1 MSE-TAKKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYCTAAADLADAQ 59 M++ + KVIVGMSGGVDSSVSA+LLQQQGY VEGLFMKNWEEDD ++YC AA DL DAQ Sbjct: 1 MTDNSQVKVIVGMSGGVDSSVSAYLLQQQGYLVEGLFMKNWEEDDTDQYCAAAQDLEDAQ 60 Query: 60 AVCDKLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDL 119 +VCDKLGI LHT+NFAAEYWDNVFE FLAEYKAGRTPNPDI+CNKEIKFKAFLEFAAEDL Sbjct: 61 SVCDKLGIPLHTINFAAEYWDNVFEHFLAEYKAGRTPNPDIMCNKEIKFKAFLEFAAEDL 120 Query: 120 GADYIATGHYVRRADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQVR 179 GADYIATGHYVRR +VDG +LLRGLD+NKDQSYFLY + +QIA+SLFPVGELEKP+VR Sbjct: 121 GADYIATGHYVRRREVDGHVQLLRGLDNNKDQSYFLYAIGEKQIAKSLFPVGELEKPEVR 180 Query: 180 KIAEDLGLVTAKKKDSTGICFIGERKFREFLGRYLPAQPGKIITVDGDEIGEHQGLMYHT 239 +IAE L+T KKDSTGICFIGERKF +FL YLPAQPG I+T G+ IG+HQGLMYHT Sbjct: 181 RIAEQQDLITHNKKDSTGICFIGERKFTDFLQEYLPAQPGDIVTPTGEVIGQHQGLMYHT 240 Query: 240 LGQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLHWVDREP 299 LGQRKGLGIGG + E PWYVV KD++NN L+VAQG +HP L S GLIA+Q WVDR P Sbjct: 241 LGQRKGLGIGGLQNSNENPWYVVGKDMDNNRLLVAQGADHPALFSYGLIAKQCDWVDRTP 300 Query: 300 FTGTMRCTVKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTPGQSAVFYNGEVCLGGGI 359 T RCTVKTRYRQ DIPCTV LDDD ++VIFD AAVTPGQSAVFYN EVCLGG I Sbjct: 301 KKSTFRCTVKTRYRQQDIPCTVTPLDDDTLKVIFDTAQAAVTPGQSAVFYNDEVCLGGAI 360 Query: 360 IEQRL 364 IE+ L Sbjct: 361 IEEHL 365 >UniRef50_D0X1F3 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase n=1 Tax=Vibrio alginolyticus 40B RepID=D0X1F3_VIBAL Length = 430 Score = 469 bits (1207), Expect = e-131, Method: Composition-based stats. Identities = 282/369 (76%), Positives = 316/369 (85%), Gaps = 5/369 (1%) Query: 1 MSE-TAKKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYCTAAADLADAQ 59 MS+ + KKVIVGMSGGVDSSVSA+LL+QQGYQVEGLFMKNWEEDD EEYCTAA DLADAQ Sbjct: 57 MSDNSQKKVIVGMSGGVDSSVSAYLLKQQGYQVEGLFMKNWEEDDNEEYCTAAEDLADAQ 116 Query: 60 AVCDKLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDL 119 AVCDKLGI LHT+NFAAEYWDNVFE FLAEYKAGRTPNPDILCNKEIKFKAFLEFA E L Sbjct: 117 AVCDKLGIHLHTINFAAEYWDNVFEYFLAEYKAGRTPNPDILCNKEIKFKAFLEFADEVL 176 Query: 120 GADYIATGHYVRRA--DVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQ 177 ADYIA GHYVRR+ + K ++LRGLD NKDQSYFLYTLS+EQIA+SLFPVG+LEKP+ Sbjct: 177 DADYIAMGHYVRRSFPENGEKPQMLRGLDGNKDQSYFLYTLSNEQIARSLFPVGDLEKPE 236 Query: 178 VRKIAEDLGLVTAKKKDSTGICFIGERKFREFLGRYLPAQPGKIITVDGDEIGEHQGLMY 237 VR+IAE+ L+TAKKKDSTGICFIGERKF EFLGRYLPAQPG I T +G+ IG+HQGLMY Sbjct: 237 VRRIAEEQDLITAKKKDSTGICFIGERKFTEFLGRYLPAQPGNIETPEGEVIGQHQGLMY 296 Query: 238 HTLGQRKGLGI--GGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLHWV 295 HTLGQRKGL I G E+PW+V +KD+E N+L+ QG +HP L S GL+A QLHWV Sbjct: 297 HTLGQRKGLHIGGRKGGGGNEDPWFVGEKDLERNVLIAVQGKDHPMLKSEGLLASQLHWV 356 Query: 296 DREPFTGTMRCTVKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTPGQSAVFYNGEVCL 355 DREP M+CTVKTRYRQ DIPCT+ +DD+ I+VIFDEP AVTPGQSAVFY G+VCL Sbjct: 357 DREPIRDVMKCTVKTRYRQEDIPCTIIPIDDENIKVIFDEPQIAVTPGQSAVFYKGDVCL 416 Query: 356 GGGIIEQRL 364 GGGIIEQR+ Sbjct: 417 GGGIIEQRI 425 >UniRef50_A6W0E1 tRNA-specific 2-thiouridylase mnmA n=20 Tax=Bacteria RepID=MNMA_MARMS Length = 390 Score = 461 bits (1186), Expect = e-128, Method: Composition-based stats. Identities = 245/356 (68%), Positives = 287/356 (80%), Gaps = 1/356 (0%) Query: 5 AKKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYCTAAADLADAQAVCDK 64 KKVIVGMSGGVDSSVSA +L QQGYQVEGLFMKNW+EDDG EYCTA DLADAQAV DK Sbjct: 30 DKKVIVGMSGGVDSSVSALILMQQGYQVEGLFMKNWDEDDGTEYCTAKDDLADAQAVSDK 89 Query: 65 LGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGADYI 124 LGI+LHT NFA+EYWDNVFE FLAEYKAGRTPNPDILCNKEIKFKAFLE+A L ADYI Sbjct: 90 LGIKLHTANFASEYWDNVFEHFLAEYKAGRTPNPDILCNKEIKFKAFLEYAM-ALNADYI 148 Query: 125 ATGHYVRRADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQVRKIAED 184 ATGHYVRR + +G+ LL+GLD NKDQSYFLY + ++IA++LFPVGELEK +VR++AE+ Sbjct: 149 ATGHYVRRGEKNGEPLLLKGLDGNKDQSYFLYAVGKDEIAKTLFPVGELEKTEVRRLAEE 208 Query: 185 LGLVTAKKKDSTGICFIGERKFREFLGRYLPAQPGKIITVDGDEIGEHQGLMYHTLGQRK 244 GL+T KKDSTGICFIGER+F++FL +YLPAQPG I T++GD+I H GLMYHT+GQR+ Sbjct: 209 FGLITHNKKDSTGICFIGERRFKDFLEQYLPAQPGDIETLEGDKIARHHGLMYHTIGQRQ 268 Query: 245 GLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLHWVDREPFTGTM 304 GLGIGG + +++PWYVV+KD+E N+L+V QG +H L LIA WV RE T + Sbjct: 269 GLGIGGLAKYSDDPWYVVEKDLERNVLIVTQGGQHESLFKTHLIADNFDWVAREKPTFPL 328 Query: 305 RCTVKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTPGQSAVFYNGEVCLGGGII 360 C K RYRQ+D CT+ L D R+EV F EP AVTPGQS VFY +VCLGGGII Sbjct: 329 TCKAKCRYRQSDQECTINELADGRVEVSFVEPQRAVTPGQSVVFYVDDVCLGGGII 384 >UniRef50_B1YTE9 tRNA-specific 2-thiouridylase mnmA n=310 Tax=cellular organisms RepID=MNMA_BURA4 Length = 389 Score = 456 bits (1174), Expect = e-127, Method: Composition-based stats. Identities = 208/363 (57%), Positives = 262/363 (72%), Gaps = 6/363 (1%) Query: 4 TAKKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYCTAAADLADAQAVCD 63 T ++V+VGMSGGVDSSV+AWLL++QGY V GLFMKNWE+DD EYC+ D D +V D Sbjct: 2 TKRRVVVGMSGGVDSSVTAWLLKEQGYDVVGLFMKNWEDDDDGEYCSTRQDWIDVVSVAD 61 Query: 64 KLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGADY 123 +GI++ VNFAAEY D VF FL EY AGRTPNPD+LCN EIKFKAFL+ A L A+ Sbjct: 62 LIGIDVEAVNFAAEYKDRVFAEFLREYSAGRTPNPDVLCNAEIKFKAFLDHAM-SLDAEM 120 Query: 124 IATGHYVRRADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQVRKIAE 183 IATGHY R + DG+ LL+ D KDQSYFL+ L+ Q+++++FP+GE+ K +VR+IA Sbjct: 121 IATGHYARVRERDGRFELLKAFDHTKDQSYFLHRLNQAQLSKTMFPLGEIPKTKVREIAA 180 Query: 184 DLGLVTAKKKDSTGICFIGERKFREFLGRYLPAQPGKIITVDGDEIGEHQGLMYHTLGQR 243 +GL AKKKDSTGICFIGER FR+FL RYLP +PG + T DG IGEH GL ++T GQR Sbjct: 181 QIGLPNAKKKDSTGICFIGERPFRDFLNRYLPTKPGPMKTPDGKVIGEHIGLAFYTFGQR 240 Query: 244 KGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLHWVDREPFTGT 303 KG+G+GG+K+G+ EPW+V KD+ +N L V QGH+HP L+S L+A + WV EP Sbjct: 241 KGIGLGGSKDGSGEPWFVAAKDIASNTLYVVQGHDHPWLLSRQLVAGNVSWVAGEPPADG 300 Query: 304 MRCTVKTRYRQTDIPCT-----VKALDDDRIEVIFDEPVAAVTPGQSAVFYNGEVCLGGG 358 C KTRYRQ D C+ + D +R + FD+ AVTPGQSAV Y+GE+CLGGG Sbjct: 301 FSCGAKTRYRQADAACSFGRPALGRADGERFSLTFDDAQWAVTPGQSAVLYDGEICLGGG 360 Query: 359 IIE 361 IIE Sbjct: 361 IIE 363 >UniRef50_Q6MA75 tRNA-specific 2-thiouridylase mnmA n=15 Tax=Bacteria RepID=MNMA_PARUW Length = 376 Score = 436 bits (1122), Expect = e-121, Method: Composition-based stats. Identities = 199/366 (54%), Positives = 243/366 (66%), Gaps = 7/366 (1%) Query: 2 SETAKKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYCTAAADLADAQAV 61 + K V+VGMSGGVDSSVSA L+++QGY V GLFMKNWEE D C++A D D + V Sbjct: 1 MKNQKTVVVGMSGGVDSSVSALLMKEQGYNVIGLFMKNWEEKDENGVCSSAQDYDDVRRV 60 Query: 62 CDKLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGA 121 CD + I + VNF Y VF F+A+++ G TPNPDILCN+EIKFK FLE A +LGA Sbjct: 61 CDHINIPYYAVNFVENYRKQVFTQFIADFQKGWTPNPDILCNREIKFKVFLEKAL-ELGA 119 Query: 122 DYIATGHYVRRADVD-GKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQVRK 180 D++ATGHY + +D G L++G+D NKDQ+YFLYTL+ + + Q LFPVG LEK QVR Sbjct: 120 DFLATGHYCQNLILDKGSPSLVKGIDHNKDQTYFLYTLNQQILQQVLFPVGGLEKSQVRD 179 Query: 181 IAEDLGLVTAKKKDSTGICFIGERKFREFLGRYLPAQPGKIITVDGDEIGEHQGLMYHTL 240 IA LVTA+KKDSTGICFIGER FR FL +Y+ QPG T+ G +G+H G Y+TL Sbjct: 180 IARKHQLVTAEKKDSTGICFIGERDFRSFLSQYVAIQPGAFQTLQGKNVGKHMGTAYYTL 239 Query: 241 GQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLHWVDREPF 300 GQRKGLGIG G E W+VV KD E I+ V QG HP L LIA L WV P Sbjct: 240 GQRKGLGIG----GAGEAWFVVGKDHERGIVFVEQGANHPALYCDELIATDLSWVAEAPL 295 Query: 301 TGTMRCTVKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTPGQSAVFYNGEVCLGGGII 360 C K RYRQ D CT+ +++ + V FD P AVTPGQS VFY G +CLGGG+I Sbjct: 296 L-PYTCQSKVRYRQNDQFCTIHRIENGKAFVTFDRPQRAVTPGQSIVFYVGNICLGGGVI 354 Query: 361 EQRLPL 366 +Q P Sbjct: 355 QQPGPT 360 >UniRef50_B0U6Q7 tRNA-specific 2-thiouridylase mnmA n=7 Tax=Xylella fastidiosa RepID=MNMA_XYLFM Length = 379 Score = 433 bits (1113), Expect = e-120, Method: Composition-based stats. Identities = 196/363 (53%), Positives = 234/363 (64%), Gaps = 4/363 (1%) Query: 1 MSETAKKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYCTAAADLADAQA 60 M+ ++IV MSGGVDSSV+AW L Q + GLFM+NW DDG C A D DA A Sbjct: 1 MNTP--RIIVAMSGGVDSSVAAWRLNSQREAIAGLFMRNW-TDDGNGQCHAEEDRRDAVA 57 Query: 61 VCDKLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLG 120 VC LGI H +F+ EYW VF FLAEY GRTPNPD+LCN+EIKFK FLE A +LG Sbjct: 58 VCGILGIAFHFRDFSHEYWQEVFTHFLAEYANGRTPNPDVLCNREIKFKHFLETA-RELG 116 Query: 121 ADYIATGHYVRRADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQVRK 180 AD IATGHY R + LLRG D +KDQSYFL+ L EQ+A +LFP+G+LEK Q+R+ Sbjct: 117 ADRIATGHYARIEHYRQRWHLLRGADRSKDQSYFLHQLGQEQLAATLFPIGDLEKQQLRQ 176 Query: 181 IAEDLGLVTAKKKDSTGICFIGERKFREFLGRYLPAQPGKIITVDGDEIGEHQGLMYHTL 240 +A GL T KKDSTGICFIGER FREFL +YLPAQPG+I I EH G+ Y TL Sbjct: 177 LAHQTGLPTHAKKDSTGICFIGERNFREFLKQYLPAQPGEIRDPQEQRIAEHPGVFYFTL 236 Query: 241 GQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLHWVDREPF 300 GQR+GL IGG + PWYV+ KD+ N+L V Q + P L S L ++ HWV P Sbjct: 237 GQRQGLNIGGVRNRPPSPWYVIGKDLATNVLYVDQHRDSPFLQSRWLRSEPAHWVSGSPP 296 Query: 301 TGTMRCTVKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTPGQSAVFYNGEVCLGGGII 360 T CT +TRYRQ D PC V +D ++V F AVTPGQS V Y+G CLGG +I Sbjct: 297 AHTFTCTAQTRYRQADEPCKVTVRNDGSLDVDFTRTQWAVTPGQSLVLYDGNECLGGAVI 356 Query: 361 EQR 363 Sbjct: 357 ATT 359 >UniRef50_D2RN19 tRNA(5-methylaminomethyl-2-thiouridylate)-methyl transferase n=2 Tax=Clostridiales RepID=D2RN19_ACIFE Length = 356 Score = 432 bits (1111), Expect = e-119, Method: Composition-based stats. Identities = 151/363 (41%), Positives = 206/363 (56%), Gaps = 16/363 (4%) Query: 7 KVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGE----EYCTAAADLADAQAVC 62 K ++ MSGGVDSSVSA L+Q GY G MK + D + C + +D+ DA++VC Sbjct: 2 KALIAMSGGVDSSVSAKLMQDAGYDCIGCNMKLYNNPDAGYCSTKTCCSLSDVEDARSVC 61 Query: 63 DKLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGAD 122 +LG+ + N+ E+ +V E F Y G TPNP I CNK +KF A + A +LG D Sbjct: 62 ARLGMPFYVFNYTEEFKHDVMEKFARSYTLGHTPNPCIDCNKFLKFGALYQRA-RELGCD 120 Query: 123 YIATGHYVRRA--DVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQVRK 180 + TGHY R + GK LL+ LD KDQSY LY L+ EQ+A + FP+G K R+ Sbjct: 121 CVVTGHYARIRKNETTGKYELLKALDPKKDQSYVLYNLTQEQLAHTCFPLGGYHKTHTRE 180 Query: 181 IAEDLGLVTAKKKDSTGICFIGERKFREFLGRYLP--AQPGKIITVDGDEIGEHQGLMYH 238 IAE+ G + + K DS ICF+ ++ + + R L QPG + ++G+ IG+H+G++Y+ Sbjct: 181 IAEENGFINSHKPDSQDICFVPNGQYTDAVQRILDYRPQPGPFLDLEGNVIGQHRGIIYY 240 Query: 239 TLGQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLHWVDRE 298 TLGQ K LG+ P YVV D + N +VV L S + +W+ E Sbjct: 241 TLGQHKHLGLNQPDF----PLYVVKIDPKKNAIVVGP---SEALFSRKASVGEANWISGE 293 Query: 299 PFTGTMRCTVKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTPGQSAVFYNGEVCLGGG 358 G +RC VK RYRQ P TV D + FDEP A+TPGQ+AV Y+GEV LGGG Sbjct: 294 VPAGPVRCQVKVRYRQDAQPATVTPTGKDTFTIQFDEPQRAITPGQAAVLYDGEVVLGGG 353 Query: 359 IIE 361 IE Sbjct: 354 TIE 356 >UniRef50_C3ZAA6 Putative uncharacterized protein n=1 Tax=Branchiostoma floridae RepID=C3ZAA6_BRAFL Length = 383 Score = 427 bits (1099), Expect = e-118, Method: Composition-based stats. Identities = 161/367 (43%), Positives = 228/367 (62%), Gaps = 14/367 (3%) Query: 6 KKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYCTAAADLADAQAVCDKL 65 + V+V +SGGVDSSV+A LL+++GYQV G+FM+NW+ + C A D DA+ VC +L Sbjct: 4 RHVVVALSGGVDSSVAALLLKRKGYQVTGVFMRNWDTVNELGVCQADRDCEDAEYVCRRL 63 Query: 66 GIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGADYIA 125 I H VN +YW++VF L EY+ G TPNPDILCNK IKF+ F + + AD +A Sbjct: 64 DIPFHQVNLVKDYWNDVFSEMLKEYQHGWTPNPDILCNKRIKFRTFFNYVMDKFEADALA 123 Query: 126 TGHYVRRADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQVRKIAEDL 185 TGHY R + D K LL+ LDS KDQ++FL + + + ++LFP+GEL KP V+++A+D Sbjct: 124 TGHYARTSIHDVK--LLQALDSWKDQTFFLSQIPQQALRRALFPLGELTKPVVKQMAQDA 181 Query: 186 GL-VTAKKKDSTGICFIGERKFREFLGRYLPAQPGKIIT-VDGDEIGEHQGLMYHTLGQR 243 G AKKK+S GICFIG R F FL YL +PG+ ++ VDG +GEH+G +T+GQR Sbjct: 182 GFTHIAKKKESMGICFIGTRNFPTFLQEYLETEPGQFVSVVDGKVLGEHKGACMYTIGQR 241 Query: 244 KGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLHWVDREPF--- 300 GLG G +EPW+VVD+D N + V +HP L ++ + +HW+ P Sbjct: 242 AGLG------GMKEPWFVVDRDTSTNSIFVCPTTDHPALYRQLIMTESVHWIADPPRDLY 295 Query: 301 -TGTMRCTVKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTPGQSAVFYNGEVCLGGGI 359 C + ++R + CT+ ++++ V EP+ A+TPGQ AVFY G+ CLGGG Sbjct: 296 VDQMYDCHFRFQHRMPLVKCTLTLSGNNQVWVSLAEPIRALTPGQYAVFYKGDECLGGGK 355 Query: 360 IEQRLPL 366 I + P Sbjct: 356 IIKLGPT 362 >UniRef50_D1SR18 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase n=1 Tax=Acidovorax avenae subsp. avenae ATCC 19860 RepID=D1SR18_9BURK Length = 403 Score = 427 bits (1098), Expect = e-118, Method: Composition-based stats. Identities = 209/399 (52%), Positives = 260/399 (65%), Gaps = 37/399 (9%) Query: 1 MSETAK-KVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYCTAAADLADAQ 59 M+ + K +++VG+SGGVDS+V+A LL+QQG++V G+FMKNWE+DD EYC++ D DA Sbjct: 1 MTASPKQRIVVGLSGGVDSAVTAHLLKQQGHEVVGIFMKNWEDDDDSEYCSSNVDFVDAA 60 Query: 60 AVCDKLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDL 119 AV D +GIE+ VNFAAEY D VF FL EY+AGRTPNPD+LCN EIKFKAFL+ A + Sbjct: 61 AVADVIGIEIEHVNFAAEYKDRVFAEFLREYEAGRTPNPDVLCNAEIKFKAFLDHAMR-V 119 Query: 120 GADYIATGHYVRRADVDG---------------------------KSRLLRGLDSNKDQS 152 GA+ IATGHY R V + LL+GLD KDQS Sbjct: 120 GAEKIATGHYARVRRVAADPGAMSGRHDRMESHATACDSAQDPHWRYELLKGLDPAKDQS 179 Query: 153 YFLYTLSHEQIAQSLFPVGELEKPQVRKIAEDLGLVTAKKKDSTGICFIGERKFREFLGR 212 YFL+ L+ Q++++LFPVGEL K +VR+IAE++GL AKKKDSTGICFIGER FREFL R Sbjct: 180 YFLHRLNQAQLSRTLFPVGELRKTEVRRIAEEIGLPNAKKKDSTGICFIGERPFREFLNR 239 Query: 213 YLPAQPGKIITVDGDEIGEHQGLMYHTLGQRKGLGIGGTKE-------GTEEPWYVVDKD 265 Y+ PG I+ G ++G+H GL ++TLGQR+GLGIGG KE G PW+V K+ Sbjct: 240 YIQHAPGPILDDRGRKLGQHVGLSFYTLGQRQGLGIGGVKEKGAQRGGGEHAPWFVARKE 299 Query: 266 VENNILVVAQGHEHPRLMSVGLIAQQLHWVDREPFTGTMRCTVKTRYRQTDIPCTVKALD 325 VE N+L V QGH+HP L+S L A WV P C KTRYRQ D CTV + Sbjct: 300 VERNVLRVVQGHDHPWLLSHTLQATDASWVAGRPPAAGA-CAAKTRYRQQDAACTVTPAE 358 Query: 326 DDRIEVIFDEPVAAVTPGQSAVFYNGEVCLGGGIIEQRL 364 + F E AVTPGQSAV Y+GEVCLGGG+I Sbjct: 359 GGDFALAFPEAQWAVTPGQSAVLYDGEVCLGGGVITAAG 397 >UniRef50_Q4FSB4 tRNA-specific 2-thiouridylase mnmA n=635 Tax=Bacteria RepID=MNMA_PSYA2 Length = 408 Score = 424 bits (1090), Expect = e-117, Method: Composition-based stats. Identities = 246/372 (66%), Positives = 287/372 (77%), Gaps = 14/372 (3%) Query: 4 TAKKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYCTAAADLADAQAVCD 63 + K VIVGMSGGVDSSVSA LLQQ G+ VEGLFMKNWEEDDG EYCTA DLADAQAVCD Sbjct: 31 STKHVIVGMSGGVDSSVSAVLLQQAGFVVEGLFMKNWEEDDGTEYCTAMDDLADAQAVCD 90 Query: 64 KLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGADY 123 K+GI+LHT NFA EYWD VFE FLAEYKAGRTPNPDILCNKEIKFKAFL++A LGADY Sbjct: 91 KIGIKLHTANFAMEYWDRVFEHFLAEYKAGRTPNPDILCNKEIKFKAFLDYAL-TLGADY 149 Query: 124 IATGHYVRRADVDGKS------RLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQ 177 IATGHY RR+ + +LLRGLD+NKDQSYFL+ + +++A++LFPVGELEKP Sbjct: 150 IATGHYTRRSVNYKNNDGIEVAQLLRGLDNNKDQSYFLHAVGGDKLAKTLFPVGELEKPV 209 Query: 178 VRKIAEDLGLVTAKKKDSTGICFIGERKFREFLGRYLPAQPGKIITVDGDEIGEHQGLMY 237 VR+IAE+ L+TA KKDSTGICFIGER+F++FL +YLPAQ G I+T DG IG H GLMY Sbjct: 210 VRQIAEEHDLITANKKDSTGICFIGERRFKDFLQQYLPAQKGDIVTDDGINIGTHDGLMY 269 Query: 238 HTLGQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLHWVDR 297 +TLGQR G+GIGG K+ EEPW+V+ KD++NN L+V QGHEHP ++S L A +L W D Sbjct: 270 YTLGQRGGIGIGGVKDRPEEPWFVLAKDLDNNRLIVGQGHEHPMMLSNELHAYKLDWTDG 329 Query: 298 EPFT-----GTMRCTVKTRYRQTDIPCTVKAL--DDDRIEVIFDEPVAAVTPGQSAVFYN 350 P T +RC K+RYRQ D C V A+ D + VIFDEP AVTPGQSAVFY Sbjct: 330 LPPTDIFSLEGLRCMAKSRYRQPDQACRVFAVNADGSEVRVIFDEPQRAVTPGQSAVFYI 389 Query: 351 GEVCLGGGIIEQ 362 EVCLGGG+I Sbjct: 390 EEVCLGGGVIAS 401 >UniRef50_A5GE36 tRNA-specific 2-thiouridylase mnmA n=20 Tax=Bacteria RepID=MNMA_GEOUR Length = 375 Score = 423 bits (1088), Expect = e-117, Method: Composition-based stats. Identities = 154/375 (41%), Positives = 219/375 (58%), Gaps = 20/375 (5%) Query: 2 SETAKKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWE-------EDDGEEYCTAAAD 54 + K+V++ MSGGVDSSV+A LL+++G++V G+ M+ W+ E + + C + D Sbjct: 4 NNKRKRVVIAMSGGVDSSVAAALLKEEGHEVIGISMQVWDYTRFTAEEGEKFDTCCSLDD 63 Query: 55 LADAQAVCDKLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEF 114 + DA+ V ++L I + VNF E+ + V + F+ EY GRTPNP + CN+ IKF+ L+ Sbjct: 64 IHDARRVAEQLEIPFYVVNFEEEFQNLVIDDFVNEYLLGRTPNPCVRCNQWIKFELLLKK 123 Query: 115 AAEDLGADYIATGHYVR-RADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGEL 173 A LGAD IATGHY R D DG+ RL++G+D KDQSYFL+TL+ EQ+A +LFP+G + Sbjct: 124 A-RGLGADMIATGHYARTEQDADGRYRLMKGVDPAKDQSYFLFTLTQEQLAMTLFPLGGM 182 Query: 174 EKPQVRKIAEDLGLVTAKKKDSTGICFIGERKFREFLGRYLPAQ--PGKIITVDGDEIGE 231 K +VR +A GL A+K +S ICF+ + + F+ Q G I+ G +G Sbjct: 183 TKQEVRALAAGYGLRVAEKGESQEICFVPDNDYVRFIEEERGKQLLSGNIVDRKGKVLGV 242 Query: 232 HQGLMYHTLGQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQ 291 H G +T+GQRKGLGI EP YV+ D + V L S GLIA Sbjct: 243 HDGTYRYTVGQRKGLGI-----AHPEPLYVLGVDAARKEVTVGPR---DALYSDGLIATA 294 Query: 292 LHWVDREPFTGTMRCTVKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTPGQSAVFYNG 351 ++W+ P + + K RYR IPC + L D+R EV F E +VTPGQ+ VFY+G Sbjct: 295 INWIAPTP-ETAIEASCKIRYRHHPIPCRILPLADNRAEVRFTEREKSVTPGQAVVFYDG 353 Query: 352 EVCLGGGIIEQRLPL 366 + LGGG IE + Sbjct: 354 DTVLGGGWIEHAVNT 368 >UniRef50_A2SLT0 tRNA-specific 2-thiouridylase mnmA n=1 Tax=Methylibium petroleiphilum PM1 RepID=MNMA_METPP Length = 396 Score = 422 bits (1086), Expect = e-117, Method: Composition-based stats. Identities = 210/397 (52%), Positives = 253/397 (63%), Gaps = 36/397 (9%) Query: 1 MSETAKKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYCTAAADLADAQA 60 MS ++V+VG+SGGVDS+VSAWLL+QQG++V GLFMKNWE+DD +EYC++ D DA + Sbjct: 1 MSAKKERVVVGLSGGVDSAVSAWLLKQQGHEVVGLFMKNWEDDDDDEYCSSRQDFLDAAS 60 Query: 61 VCDKLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLG 120 V D +GIE+ VNFAAEY D VF FL EY+AGRTPNPD+LCN EIKFKAFL+ A LG Sbjct: 61 VADVIGIEIEHVNFAAEYRDRVFAEFLREYEAGRTPNPDVLCNAEIKFKAFLDHALR-LG 119 Query: 121 ADYIATGHY---------------------------VRRADVDGKSRLLRGLDSNKDQSY 153 A IATGHY R + G+ LL+GLD++KDQSY Sbjct: 120 AGKIATGHYARVRRAPALPGMPDGPLDESSAGALDRARVREAGGRFELLKGLDASKDQSY 179 Query: 154 FLYTLSHEQIAQSLFPVGELEKPQVRKIAEDLGLVTAKKKDSTGICFIGERKFREFLGRY 213 FL+ LS Q+A++LFPVGEL K +VR+IA ++ L A KKDSTGICFIGER FREFL RY Sbjct: 180 FLHRLSQAQLARTLFPVGELPKTEVRRIAAEIRLPVAAKKDSTGICFIGERPFREFLNRY 239 Query: 214 LPAQPGKIITVDGDEIGEHQGLMYHTLGQRKGLGIGGTKEG-------TEEPWYVVDKDV 266 L PG I G +GEH GL ++TLGQRKG+GIGG KE PW+V KD Sbjct: 240 LAHAPGPIKDERGRTLGEHVGLSFYTLGQRKGIGIGGVKERGAARGGADHAPWFVARKDR 299 Query: 267 ENNILVVAQGHEHPRLMSVGLIAQQLHWVDREPFTGTMRCTVKTRYRQTDIPCTVKALDD 326 +N L V QGH+HP L S L A W+ P KTRYRQ D C + D Sbjct: 300 PHNTLYVVQGHDHPWLQSFRLEADDASWIAGTPPA-PGALAAKTRYRQADASCVLAPGAD 358 Query: 327 DRIEVIFDEPVAAVTPGQSAVFYNGEVCLGGGIIEQR 363 R + F P AVTPGQSAV Y+GEVCLGGG+I Sbjct: 359 GRFRLDFGVPQWAVTPGQSAVLYDGEVCLGGGVIAAA 395 >UniRef50_C9KPU1 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase n=2 Tax=Clostridiales RepID=C9KPU1_9FIRM Length = 366 Score = 422 bits (1084), Expect = e-116, Method: Composition-based stats. Identities = 152/368 (41%), Positives = 223/368 (60%), Gaps = 16/368 (4%) Query: 4 TAKKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEE----DDGEEYCTAAADLADAQ 59 T KKV+V MSGGVDSS++A LL++QGY+ G+ M+ EE D+ + C + + + DA+ Sbjct: 2 TKKKVVVAMSGGVDSSLTAALLKEQGYEAIGVTMRLSEESRDFDENDRGCCSLSSVDDAR 61 Query: 60 AVCDKLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDL 119 V + +GI +T+NF + + V + FLA+Y G TPNP I CN+ +KF+ L+ A +L Sbjct: 62 RVAEIIGIPHYTMNFKEMFQEKVIDYFLADYAKGWTPNPCIACNRYVKFEGLLQKAM-EL 120 Query: 120 GADYIATGHYVRR-ADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQV 178 GADY+ATGHY R D G+ L +G+D++KDQSY LY L+ + +A L P+G+ K + Sbjct: 121 GADYVATGHYARIAQDESGRYVLKKGIDTHKDQSYALYHLNQQSLAHFLMPLGDYTKVET 180 Query: 179 RKIAEDLGLVTAKKKDSTGICFIGERKFREFLGRYLPA--QPGKIITVDGDEIGEHQGLM 236 R++AE L A K DS ICF+ ++ +L P+ PG I+ +G +G H+G+ Sbjct: 181 REMAERYKLPVAHKPDSQEICFVPHDDYKAYLRAKNPSCLHPGDIVDKEGHVLGHHEGVP 240 Query: 237 YHTLGQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLHWVD 296 +T+GQRKGLGI EP YVVD D+ +N +VV + + S GLIA L+W+ Sbjct: 241 LYTIGQRKGLGI-----AHPEPLYVVDLDMAHNRVVVGGAGD---VFSDGLIAGDLNWIA 292 Query: 297 REPFTGTMRCTVKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTPGQSAVFYNGEVCLG 356 + + T K RY + + V+ L ++ V F EP AVTPGQS VFY G+ +G Sbjct: 293 IDALEAPIEVTAKVRYGRREGRAHVEPLAGGKVRVHFAEPQRAVTPGQSVVFYAGDTVVG 352 Query: 357 GGIIEQRL 364 GGIIE+ + Sbjct: 353 GGIIEKAI 360 >UniRef50_A8DJE2 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase n=1 Tax=Candidatus Chloracidobacterium thermophilum RepID=A8DJE2_9BACT Length = 392 Score = 421 bits (1082), Expect = e-116, Method: Composition-based stats. Identities = 150/393 (38%), Positives = 210/393 (53%), Gaps = 45/393 (11%) Query: 6 KKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNW---------EEDDGEEYCTAAADLA 56 +++ V MSGGVDSS +A LL++QGY V G M+ W E + C + DL Sbjct: 3 ERIAVAMSGGVDSSTAAALLKEQGYDVVGFSMQLWNQRRINVDAEGNPLPSRCCSLDDLY 62 Query: 57 DAQAVCDKLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAA 116 DA+AV + LGI + +NF E+ V F+ Y G TP+P + CN +KF + A Sbjct: 63 DARAVAEALGIPFYVLNFEEEFEARVVRPFVVSYLNGNTPSPCVACNSRMKFDTLV-ALA 121 Query: 117 EDLGADYIATGHYVRRA--DVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELE 174 D+GA +ATGHY R D G+ L +G D +KDQSYFL+ L+ EQ+A +LFP+GEL Sbjct: 122 RDVGAAKVATGHYARVQFNDTTGRWELRKGRDLHKDQSYFLFELTQEQLAWALFPLGELS 181 Query: 175 KPQVRKIAEDLGLVTAKKKDSTGICFIGERKFREFLGRYLP------------------- 215 K + R +A GL TA+K +S ICFI + + F+ RYL Sbjct: 182 KAETRALARRYGLPTAEKAESQEICFIPDGNYARFIERYLAEAGGTVAGEPQSPVAPTLV 241 Query: 216 --------AQPGKIITVDGDEIGEHQGLMYHTLGQRKGLGIGGTKEGTEEPWYVVDKDVE 267 QPG+I+T DG +G H G+ ++T+GQR+GLG+ G P YVV D Sbjct: 242 QLGLRRNMPQPGEIVTTDGRVLGRHNGIHHYTVGQRRGLGV---TAGDGRPLYVVRIDAA 298 Query: 268 NNILVVAQGHEHPRLMSVGLIAQQLHWVDREPFTGTMRCTVKTRYRQTDIPCTVKALDDD 327 ++V L L A +++W+ T RC + RYR + P T+ L D Sbjct: 299 RGQVIVGPEE---ALTGKTLTATRVNWITLPELTAPRRCAARIRYRHLEAPATIYPLPDG 355 Query: 328 RIEVIFDEPVAAVTPGQSAVFYNGEVCLGGGII 360 + V+FD P A+TPGQ+ VFY+GE+ LGGG I Sbjct: 356 NVRVVFDIPQKAITPGQAVVFYDGELVLGGGWI 388 >UniRef50_A1WWV9 tRNA-specific 2-thiouridylase mnmA n=2 Tax=Bacteria RepID=MNMA_HALHL Length = 383 Score = 420 bits (1081), Expect = e-116, Method: Composition-based stats. Identities = 178/367 (48%), Positives = 227/367 (61%), Gaps = 3/367 (0%) Query: 1 MSETAKKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYCTAAADLADAQA 60 M+E+ K+++VG+SGGVDS+V+A L + G++V GLFMKNWE+DD C+A D+A A A Sbjct: 1 MTESPKRIVVGLSGGVDSAVAALRLVRAGHEVIGLFMKNWEDDDTLTQCSAEDDIAAAVA 60 Query: 61 VCDKLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLG 120 V + LGI + VNFAA Y VFE L E +AGRTPNPDILCN+ +KF FL A E Sbjct: 61 VAEHLGIPIRRVNFAAHYRREVFEHALQELRAGRTPNPDILCNRHVKFDRFLRHAREQFE 120 Query: 121 ADYIATGHYVR-RADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQVR 179 AD +ATGHY R DG+ LLRG+D +KDQSYFL + + + FP+G+ K VR Sbjct: 121 ADAVATGHYARTGRAGDGEPALLRGIDPSKDQSYFLAGVPRQALDAVRFPLGDSTKETVR 180 Query: 180 KIAEDLGLVTAKKKDSTGICFIGERKFREFLGRYLPAQPGKIITVDGDEIGEHQGLMYHT 239 A L + DSTGICFIGER F +F+ RY+ PG I+T DG EIG H GL ++T Sbjct: 181 AEARSAALPNFDRPDSTGICFIGERDFTQFMQRYIDPHPGPILTEDGREIGRHCGLAFYT 240 Query: 240 LGQRKGLGIGGTKEG-TEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLHWVDRE 298 LGQR+GLGIGG + + PWYV KD N L V QGH+HP L S + + HW+ Sbjct: 241 LGQRRGLGIGGDRNRDSSAPWYVAGKDARRNALFVVQGHDHPWLQSAAVSTEPFHWLAPV 300 Query: 299 PFTGTMRCTVKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTPGQSAVFYNGEVCLGGG 358 P G R + RYRQ + + R+ FDEP A TPGQ V Y+ E CLGGG Sbjct: 301 PAEG-ARLHAQVRYRQEPQAGQLSHAEGGRVVFRFDEPQRAATPGQHLVLYDREQCLGGG 359 Query: 359 IIEQRLP 365 +I+ P Sbjct: 360 VIDTAHP 366 >UniRef50_C0B5F7 Putative uncharacterized protein n=2 Tax=Lachnospiraceae RepID=C0B5F7_9FIRM Length = 359 Score = 420 bits (1080), Expect = e-116, Method: Composition-based stats. Identities = 141/364 (38%), Positives = 221/364 (60%), Gaps = 17/364 (4%) Query: 5 AKKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDD-----GEEYCTAAADLADAQ 59 KKV+VGMSGGVDSSV+A+LL++QGY V G+ M+ W++++ C + + DA+ Sbjct: 3 KKKVVVGMSGGVDSSVAAYLLKEQGYDVIGVTMQIWQDEESKIQEENGGCCGLSAVDDAR 62 Query: 60 AVCDKLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDL 119 V ++GI + +NF ++ + V + F+ EY GRTPNP I CN+ +K+++ L + ++ Sbjct: 63 KVAAQIGIPYYVMNFKKDFQEKVIDYFVDEYLHGRTPNPCIACNRYVKWESLLTRSM-EI 121 Query: 120 GADYIATGHYVRRADV-DGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQV 178 GADYIATGHY R + +G+ + +KDQ+Y LY L+ +Q+ ++L PVGE EK Q+ Sbjct: 122 GADYIATGHYARVEQLPNGRYAIRHSATWSKDQTYALYNLTQDQLRRTLMPVGEYEKDQI 181 Query: 179 RKIAEDLGLVTAKKKDSTGICFIGERKFREFLGRYLPAQ--PGKIITVDGDEIGEHQGLM 236 R+IA+++GL A K DS ICF+ + + F+ + G +T DG +G H+G++ Sbjct: 182 REIAKEIGLQIANKPDSQDICFVSDDDYASFIEEESDQKIPEGNFVTPDGKILGRHKGII 241 Query: 237 YHTLGQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLHWVD 296 ++T+GQRKGLG+ P +V++ + N +V+ + LM+ + A +L+++ Sbjct: 242 HYTIGQRKGLGLSLGY-----PAFVLEIRPDTNEVVIGTNED---LMTTRVRANKLNFMT 293 Query: 297 REPFTGTMRCTVKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTPGQSAVFYNGEVCLG 356 E G MR K RY CTV+ +D IE IF+ P AVTPGQ+ V Y+G+ LG Sbjct: 294 VEDLEGEMRVFAKIRYNHKGDWCTVRKTGEDEIECIFETPQRAVTPGQALVLYDGDYVLG 353 Query: 357 GGII 360 GG I Sbjct: 354 GGTI 357 >UniRef50_B0K991 tRNA-specific 2-thiouridylase mnmA 2 n=9 Tax=Clostridia RepID=MNMA2_THEP3 Length = 364 Score = 420 bits (1079), Expect = e-116, Method: Composition-based stats. Identities = 150/372 (40%), Positives = 231/372 (62%), Gaps = 18/372 (4%) Query: 2 SETAKKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEED-----DGEEYCTAAADLA 56 E +V +GMSGGVDSSV+A+LL++QG+ V GL M+ W + D ++ C + Sbjct: 1 MEINNRVAIGMSGGVDSSVAAYLLKKQGFDVIGLTMRVWVDHEAKAFDSDKSCCSLKATQ 60 Query: 57 DAQAVCDKLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAA 116 DA+ V + LGI +TV+ + ++D + F+ EY GRTPNP +LCN++IKF LE A Sbjct: 61 DAKKVAEILGIPHYTVDLSKIFYDKIVNYFVNEYLKGRTPNPCVLCNRQIKFGELLEKAF 120 Query: 117 EDLGADYIATGHYVRRADV--DGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELE 174 +LGA YIATGHYVR+ + L +G+DS+KDQSY LY L+ +Q+ +LFP+G + Sbjct: 121 -ELGAYYIATGHYVRKEYDEKTKRYLLKKGIDSSKDQSYVLYRLTQKQLEHALFPLGNYK 179 Query: 175 KPQVRKIAEDLGLVTAKKKDSTGICFIGERKFREFLGRYL--PAQPGKIITVDGDEIGEH 232 K ++R +AE+L L AKK +S ICFI + + + R + +PG+ V G +G H Sbjct: 180 KEEIRALAEELKLPVAKKPESQEICFIPDNDYSGLIKRQVKDEIKPGEFRDVHGKFLGYH 239 Query: 233 QGLMYHTLGQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQL 292 +G++++T+GQR+GLG+ ++ P YVVD DV+NN++VV + + LI+ Sbjct: 240 KGIIHYTIGQRRGLGLS-----SDRPLYVVDIDVKNNVVVVGHQED---VWGEELISSNN 291 Query: 293 HWVDREPFTGTMRCTVKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTPGQSAVFYNGE 352 +++ E M+ T K RY + +K ++D++ V F +P A+TPGQS VFY+ + Sbjct: 292 NFISIEKLEKEMKVTAKIRYTAKEEEAIIKPYEEDKVLVKFLKPQRAITPGQSVVFYDKD 351 Query: 353 VCLGGGIIEQRL 364 V +GGGIIE++L Sbjct: 352 VVVGGGIIERKL 363 >UniRef50_A6LSF2 tRNA-specific 2-thiouridylase mnmA n=19 Tax=Clostridiales RepID=MNMA_CLOB8 Length = 358 Score = 417 bits (1072), Expect = e-115, Method: Composition-based stats. Identities = 142/366 (38%), Positives = 217/366 (59%), Gaps = 15/366 (4%) Query: 5 AKKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDG----EEYCTAAADLADAQA 60 KKV+VGMSGGVDSSV+A+LL+QQGY V G M+ W+ D+ E C + + + DA+ Sbjct: 2 KKKVLVGMSGGVDSSVAAYLLKQQGYDVIGATMQIWQHDEEFEEREGGCCSLSAVDDARR 61 Query: 61 VCDKLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLG 120 VCDKL I + +NF + + V + F+ EY G+TPNP I CNK +KF L A +G Sbjct: 62 VCDKLDIPFYVLNFRDYFKEKVIDKFVQEYIDGKTPNPCIECNKHLKFDELLRRA-RGIG 120 Query: 121 ADYIATGHYVRRADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQVRK 180 ADY+ATGHY + D + L+R D KDQ+Y LY + +Q+ +L P G+ EK ++R+ Sbjct: 121 ADYVATGHYAKIEKRDDRYLLIRSDDDRKDQTYALYNFTQDQLEHTLMPCGDYEKTKIRE 180 Query: 181 IAEDLGLVTAKKKDSTGICFIGERKFREFLGRYLP--AQPGKIITVDGDEIGEHQGLMYH 238 IA+++GL KKDS ICFI + +++ P +PG + G+ +G+H+G++Y+ Sbjct: 181 IAKEIGLAVHNKKDSEEICFISDNNHGKYISEAEPNRVKPGNFVDKSGNILGKHKGIVYY 240 Query: 239 TLGQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLHWVDRE 298 T+GQRKGLG+ + P +V + + + N +V+ + + LIA ++++ + Sbjct: 241 TIGQRKGLGLSLGR-----PVFVTNINAKTNEVVLGSEDD---IFKTELIATDVNFIPFD 292 Query: 299 PFTGTMRCTVKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTPGQSAVFYNGEVCLGGG 358 + T K RY T+ L + R++VIF E A+T GQS VFY+ E+ +GGG Sbjct: 293 KLEKEIEVTAKIRYSARPAEATLIPLPNGRVKVIFKEKQRAITKGQSVVFYDDEIVVGGG 352 Query: 359 IIEQRL 364 IIE + Sbjct: 353 IIESII 358 >UniRef50_C0E8G4 Putative uncharacterized protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0E8G4_9CLOT Length = 352 Score = 417 bits (1071), Expect = e-115, Method: Composition-based stats. Identities = 148/361 (40%), Positives = 216/361 (59%), Gaps = 16/361 (4%) Query: 9 IVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDD----GEEYCTAAADLADAQAVCDK 64 ++GMSGGVDSSV+A LL +QGY+V G + W+ +D E C + D+ DA+ VC + Sbjct: 1 MIGMSGGVDSSVAAALLIEQGYEVVGATFRLWKPEDDLFDSEATCCSLDDINDAREVCHQ 60 Query: 65 LGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGADYI 124 LGI + +N E+ + V + F+ EY+AGRTPNP I+CN++IKF F + AA LG DY+ Sbjct: 61 LGIPHYVLNLKREFKEAVVQNFVEEYQAGRTPNPCIVCNQKIKFDYFYQKAA-ALGFDYV 119 Query: 125 ATGHYVRR-ADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQVRKIAE 183 ATGHY R + G+ +L + KDQSYFLY + + + LFP+G KPQVR++AE Sbjct: 120 ATGHYARIEQNEQGEFQLKTAAYAQKDQSYFLYGIPYPNLGHILFPLGGYTKPQVRELAE 179 Query: 184 DLGLVTAKKKDSTGICFIGERKFREFLGRYLPAQP--GKIITVDGDEIGEHQGLMYHTLG 241 G + K+DS ICF+ + FL R+ P G I G +GEH+G+ ++T+G Sbjct: 180 KYGFSVSHKRDSQEICFVDRNGYGTFLERFTGTIPPKGNFIDSQGTVLGEHKGIWHYTVG 239 Query: 242 QRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLHWVDREPFT 301 QRKGLG+ +P YV + + +N + + E+ S L A++++++ P + Sbjct: 240 QRKGLGM-----AFGKPMYVSEINPADNTVRLVDDEEN---YSSRLTAERMNYLIPHPPS 291 Query: 302 GTMRCTVKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTPGQSAVFYNGEVCLGGGIIE 361 +R VK R R P + L + +IE+ FD+P A+T GQSAV Y+GEVCLGGGII Sbjct: 292 KPVRVQVKIRNRAEFAPALLTPLSEAKIELAFDQPQRAITKGQSAVLYDGEVCLGGGIIT 351 Query: 362 Q 362 Sbjct: 352 A 352 >UniRef50_C0WCT5 Putative uncharacterized protein n=1 Tax=Acidaminococcus sp. D21 RepID=C0WCT5_9FIRM Length = 357 Score = 415 bits (1067), Expect = e-114, Method: Composition-based stats. Identities = 144/364 (39%), Positives = 201/364 (55%), Gaps = 17/364 (4%) Query: 7 KVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGE---EYCTAAADLADAQAVCD 63 K ++ MSGGVDSSV+A L+ QGY+ G MK + D + C + D+ DA++V Sbjct: 2 KALIAMSGGVDSSVAAKLMLDQGYECVGCTMKLYNNPDAGCSSKTCCSIRDVEDARSVAV 61 Query: 64 KLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGADY 123 +LG+ N+ E+ +V E F Y G+TPNP I CNK +KF A E A ++LG D Sbjct: 62 RLGMPYFVFNYMDEFRRDVMETFARSYTLGKTPNPCIDCNKFLKFGALYERA-KELGCDT 120 Query: 124 IATGHYVRRADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQVRKIAE 183 I TGHY R +G LLR D KDQSY LY L+ EQ+A + FP+G+ EK R+IAE Sbjct: 121 IVTGHYARIRKRNGCYELLRAKDPKKDQSYVLYNLTQEQLAHTQFPLGDYEKTHTREIAE 180 Query: 184 DLGLVTAKKKDSTGICFIGERKFREFLGRYL--PAQPGKIITVDGDEIGEHQGLMYHTLG 241 + G + + K DS ICF+ + E + R L QPG +T+DG EIG H+G++Y+T+G Sbjct: 181 ESGFINSHKPDSQDICFVPNGTYTEAVQRILSYEPQPGPFLTLDGKEIGTHKGIIYYTIG 240 Query: 242 QRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLHWVDREPFT 301 Q K LG+ P YV+ D + N ++V L ++ +W+ + Sbjct: 241 QHKKLGLPQPD----GPLYVIAIDPKKNAVIVGP---SQALFRRDAAVKEANWISGKVPD 293 Query: 302 GTMRCTVKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTPGQSAVFY----NGEVCLGG 357 C VK RYRQ P V D ++FDEP A+TPGQSAV Y +V +GG Sbjct: 294 APFACLVKVRYRQEAQPAIVTPTGSDTFSILFDEPQRAITPGQSAVLYGLGDETDVVIGG 353 Query: 358 GIIE 361 GI++ Sbjct: 354 GILQ 357 >UniRef50_A5UV64 tRNA-specific 2-thiouridylase mnmA n=7 Tax=Bacteria RepID=MNMA_ROSS1 Length = 373 Score = 413 bits (1063), Expect = e-114, Method: Composition-based stats. Identities = 144/379 (37%), Positives = 201/379 (53%), Gaps = 32/379 (8%) Query: 7 KVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDD---GEEYCTAAADLADAQAVCD 63 K++V MSGGVDSS++A LL + G+ V G+ + WE DD E C + A+ VC Sbjct: 3 KIMVAMSGGVDSSLAAALLHEAGHDVTGVTLHLWEGDDDRLAESLCCSQEMTESARRVCA 62 Query: 64 KLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGADY 123 +LGI + N+ E+ V E FL EY +G TPNP + CN+EIKF+A L A LG DY Sbjct: 63 QLGIPYYVFNYQREFRRYVIEYFLREYASGFTPNPCLECNREIKFRALLARA-RTLGFDY 121 Query: 124 IATGHYVRRADVDGKSR------------------LLRGLDSNKDQSYFLYTLSHEQIAQ 165 +ATGHY R + + LLR +D KDQSY LY L + +A+ Sbjct: 122 VATGHYARIRADETRHNGEDAGLPPAERAQRTTYRLLRAVDREKDQSYMLYMLGQDDLAR 181 Query: 166 SLFPVGELEKPQVRKIAEDLGLVTAKKKDSTGICFIGERKFREFLGRYLPA--QPGKIIT 223 +FP+GE K +VR +A GL +A + +S ICF+ +R L P +PG I+ Sbjct: 182 LIFPIGEYTKAEVRAMAAARGLASANRPESQDICFVPGGDYRNLLREERPDALRPGPILD 241 Query: 224 VDGDEIGEHQGLMYHTLGQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLM 283 ++G E+G HQGL +T+GQR+GLGI T +P YV DV N ++V L Sbjct: 242 LEGREVGRHQGLPLYTIGQRRGLGI-----ATGQPMYVTALDVARNAVIVGPES---ALR 293 Query: 284 SVGLIAQQLHWVDREPFTGTMRCTVKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTPG 343 L A+ + +V C + R +P V + ++V F P AVTPG Sbjct: 294 RESLRAEWVTFVSGMWPEAPFDCLAQIRAHADAVPARVIPGEAGTVDVHFSRPQRAVTPG 353 Query: 344 QSAVFYNGEVCLGGGIIEQ 362 Q+ VFY+G+V LGGG I + Sbjct: 354 QAIVFYDGDVVLGGGRIAR 372 >UniRef50_Q253W3 tRNA-specific 2-thiouridylase mnmA n=3 Tax=Chlamydophila RepID=MNMA_CHLFF Length = 361 Score = 412 bits (1060), Expect = e-114, Method: Composition-based stats. Identities = 171/359 (47%), Positives = 228/359 (63%), Gaps = 9/359 (2%) Query: 5 AKKVIVGMSGGVDSSVSAWLLQQ-QGYQVEGLFMKNWEEDDGEEYCTAAADLADAQAVCD 63 K V+V MSGGVDSSV A+LL+ Y+V GLFMKNWEE+DGE C+ A D D + V Sbjct: 2 NKTVVVAMSGGVDSSVVAYLLKNYTSYKVLGLFMKNWEEEDGEGLCSTAKDYEDVEKVAG 61 Query: 64 KLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGADY 123 +L I +TV+FA EY + VF FL Y G TPNPD+LCN+EIKF L+ +LG D+ Sbjct: 62 QLDIPYYTVSFAKEYRERVFSRFLTGYSEGYTPNPDVLCNREIKFD-LLQKKVRELGGDF 120 Query: 124 IATGHYVRRADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQVRKIAE 183 +ATGHY R + + LLRG+D KDQSYFL E + +FP+G+ K +VR IA Sbjct: 121 LATGHYCRVSPDENGVNLLRGIDPQKDQSYFLCGTRKESLENVIFPLGDKTKTEVRSIAA 180 Query: 184 DLGLVTAKKKDSTGICFIGERKFREFLGRYLPAQPGKIITVDG-DEIGEHQGLMYHTLGQ 242 GL TA+K+DSTGICFIG+R F+ FL +++P G I+ D +G H+G Y+T+GQ Sbjct: 181 QAGLATAQKRDSTGICFIGKRPFKSFLEKFVPNLEGNIVDYDSQRVVGHHEGAHYYTIGQ 240 Query: 243 RKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLHWVDREPFTG 302 R+GL +G G+E+P YVV KD+E NI+ + +G +HP L L A++L+W Sbjct: 241 RRGLDLG----GSEKPCYVVGKDMEKNIVYIVRGEDHPLLYQTELTARELNWFVS--PKS 294 Query: 303 TMRCTVKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTPGQSAVFYNGEVCLGGGIIE 361 C+ K RYR D C + +D + V F PV A+TPGQ+ FY+GE CLGGG+IE Sbjct: 295 ITTCSAKVRYRSNDEECEILLRGEDEVLVRFASPVKAITPGQAIAFYDGERCLGGGVIE 353 >UniRef50_D0WIU4 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase n=1 Tax=Slackia exigua ATCC 700122 RepID=D0WIU4_9ACTN Length = 362 Score = 412 bits (1059), Expect = e-113, Method: Composition-based stats. Identities = 145/368 (39%), Positives = 205/368 (55%), Gaps = 19/368 (5%) Query: 6 KKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEY--------CTAAADLAD 57 K+V+VGMSGGVDSSV+A++L+QQGY+V G M+ D C + D+ D Sbjct: 3 KRVMVGMSGGVDSSVTAYVLKQQGYEVIGATMRLHGSDLPGRDARSCASRTCCSLDDVED 62 Query: 58 AQAVCDKLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAE 117 A++V +LGI T++F + D V + F+ Y+ RTPNP I CN+ +KF + LE A + Sbjct: 63 AKSVARRLGIAHRTIDFTDRFEDAVIKPFVRAYETARTPNPCIDCNRRLKFGSMLERALD 122 Query: 118 DLGADYIATGHYVRRADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQ 177 LG DY+ATGHY + + L+RG D++KDQSY LY+L+ Q+A +L P+G + K + Sbjct: 123 -LGCDYVATGHYAQIVRRGDRFALVRGADASKDQSYVLYSLTQYQLAHTLLPLGGMRKSE 181 Query: 178 VRKIAEDLGLVTAKKKDSTGICFIGERKFREFLGRYLP--AQPGKIITVDGDEIGEHQGL 235 VR IA + G + A K +S ICFI + + FL RY QPG+I G IG H G+ Sbjct: 182 VRAIAAEQGFINADKPESQDICFIPDGDYVGFLERYSGHTPQPGEIRDEAGAVIGRHSGI 241 Query: 236 MYHTLGQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLHWV 295 T+GQRKG+GI P YVV KD ++ LVV L+S G +A +WV Sbjct: 242 ESFTVGQRKGIGI-----AASGPLYVVAKDARDHALVVGPK---DSLLSDGCVADDWNWV 293 Query: 296 DREPFTGTMRCTVKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTPGQSAVFYNGEVCL 355 + VKT YRQT P V+ D + +++ P PGQ+ V Y G+ + Sbjct: 294 ADPEDLASFEVMVKTHYRQTPHPARVERRQDGTVRIVYASPARLAAPGQAVVVYQGDEVI 353 Query: 356 GGGIIEQR 363 GGG + Sbjct: 354 GGGTVAST 361 >UniRef50_C4ZB38 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase n=3 Tax=Firmicutes RepID=C4ZB38_EUBR3 Length = 362 Score = 410 bits (1055), Expect = e-113, Method: Composition-based stats. Identities = 142/368 (38%), Positives = 219/368 (59%), Gaps = 17/368 (4%) Query: 5 AKKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDD-----GEEYCTAAADLADAQ 59 KKV+VGMSGGVDSSV+A+LL++QGY V G+ M+ W+++D E C + + DA+ Sbjct: 2 KKKVVVGMSGGVDSSVAAYLLKEQGYDVIGVTMQIWQDEDVFKQSQEGGCCGLSAVEDAR 61 Query: 60 AVCDKLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDL 119 V L I + +NF A++ V + F++EY+ TPNP I CN+ +K+++ L + ++ Sbjct: 62 RVAAVLDIPYYVMNFKADFKKYVIDYFVSEYERAYTPNPCIACNRYVKWESLLHRSL-EI 120 Query: 120 GADYIATGHYVRRADV-DGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQV 178 GADYIATGHY R A + +G+ + + + KDQ+Y LY L+ EQ+ ++L PVGE EKPQ+ Sbjct: 121 GADYIATGHYARIAQLPNGRYTIANSVTAEKDQTYALYNLTQEQLRRTLMPVGEYEKPQI 180 Query: 179 RKIAEDLGLVTAKKKDSTGICFIGERKFREFLGRYLPA--QPGKIITVDGDEIGEHQGLM 236 R+IAE+ GL A K DS ICF+ + + F+ +PG + G+ +G H+GL+ Sbjct: 181 RRIAEEAGLPVAHKSDSQDICFVPDHDYASFIENETGKTYEPGNFVDESGNILGRHKGLI 240 Query: 237 YHTLGQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLHWVD 296 ++T+GQRKGLGI P +V + N +V++ + L S ++++ Sbjct: 241 HYTIGQRKGLGITAA-----TPLFVKELRPATNEVVIST---NESLFSDTCYISDINYMA 292 Query: 297 REPFTGTMRCTVKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTPGQSAVFYNGEVCLG 356 +E T R K RY CT+ +++ I+ +FDEP A+TPGQ+AVFY L Sbjct: 293 QEHITPDTRSIGKVRYSHRGADCTLTPMENGMIKCVFDEPQRAMTPGQAAVFYQDGHVLC 352 Query: 357 GGIIEQRL 364 GG IE+ + Sbjct: 353 GGTIEKMM 360 >UniRef50_B0TFA7 tRNA-specific 2-thiouridylase mnmA n=97 Tax=Bacteria RepID=MNMA_HELMI Length = 385 Score = 408 bits (1049), Expect = e-112, Method: Composition-based stats. Identities = 149/371 (40%), Positives = 212/371 (57%), Gaps = 18/371 (4%) Query: 5 AKKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEE---YCTAAADLADAQAV 61 + V+V MSGGVDSSV+A LL +QGY V G+ ++ W +D E C + + + DA+ V Sbjct: 2 KETVVVAMSGGVDSSVTAALLLEQGYDVIGVTLQIWPKDAPEGAEGGCCSLSAVEDAKRV 61 Query: 62 CDKLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGA 121 KLG+ + +NF + V E F EY AG+TPNP I CN+ IKF+ L+ + LGA Sbjct: 62 ASKLGVPHYVLNFRDYFETEVIEYFGREYLAGQTPNPCIRCNRVIKFEGLLQKSL-ALGA 120 Query: 122 DYIATGHYVRRADV--DGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQVR 179 +ATGHY R G+ RL RG+D+NKDQSY L+ ++ EQ++++LFP+G KP++R Sbjct: 121 AKVATGHYARIEQDSATGRYRLGRGIDANKDQSYALFNMTQEQLSRTLFPLGGFTKPEIR 180 Query: 180 KIAEDLGLVTAKKKDSTGICFIGERKFREFLGRYLP---AQPGKIITVDGDEIGEHQGLM 236 + A LGL A K DS ICFI + +R FL P QPG + +G+ IG H+GL Sbjct: 181 EKAAQLGLAVASKPDSQEICFIPDNDYRRFLEERYPDHRFQPGPFVDQEGNVIGTHRGLP 240 Query: 237 YHTLGQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLHWVD 296 ++T+GQRKGLG+ P YV+ DVE+N +V+ + L+A L+W+D Sbjct: 241 FYTVGQRKGLGV-----AFGFPAYVIALDVEHNAVVIGPDE---AVKGRRLLADDLNWID 292 Query: 297 REPFTGTMRCTVKTRYRQTDIPCTVKALDDDR-IEVIFDEPVAAVTPGQSAVFYNGEVCL 355 M K RY + + + D + V F P A+TPGQ+ VFY G+ + Sbjct: 293 IAGLKAPMEVEAKIRYSASPAIAVISPVKDGSAVIVEFAAPQRAITPGQAVVFYRGDWVV 352 Query: 356 GGGIIEQRLPL 366 GGG I + L L Sbjct: 353 GGGTIVRNLDL 363 >UniRef50_B5ZBP8 tRNA-specific 2-thiouridylase mnmA n=43 Tax=Bacteria RepID=MNMA_UREU1 Length = 380 Score = 405 bits (1042), Expect = e-111, Method: Composition-based stats. Identities = 175/373 (46%), Positives = 239/373 (64%), Gaps = 19/373 (5%) Query: 4 TAKKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWE----------EDDGEEYCTAAA 53 T K+V++G+SGGVDSSVSA LL+QQGY+V GLFM NW+ D + C + Sbjct: 5 TKKRVVIGLSGGVDSSVSALLLKQQGYEVIGLFMANWDTVANFENNRESDKKHQGCESEL 64 Query: 54 DLADAQAVCDKLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLE 113 D DAQAV K+GI L+ V F EYW+NVFE FL+EY+ RTPNPDILCN+ IKF +FL Sbjct: 65 DYQDAQAVAQKIGIPLYRVEFIKEYWNNVFEYFLSEYQKNRTPNPDILCNQFIKFDSFLN 124 Query: 114 FAAEDLGADYIATGHYVRRADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGEL 173 +A +L ADYIA GHY + + S LL+ D NKDQ+YFL L Q+ +LFP+G+L Sbjct: 125 YAKNELKADYIAMGHYAKVKHTNNLSYLLKATDVNKDQTYFLCNLKQTQLQNALFPIGDL 184 Query: 174 EKPQVRKIAEDLGLVTAKKKDSTGICFIGERKFREFLGRYLPAQPGKIITV-DGDEIGEH 232 K QVR IA++ GLVTA KKDSTGICFIGER F+ FL Y+P QPG+I+ + + +G H Sbjct: 185 TKQQVRTIAKEYGLVTANKKDSTGICFIGERNFKYFLENYIPNQPGEIVNIVNNQIVGHH 244 Query: 233 QGLMYHTLGQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQ-GHEHPRLMSVGLIAQQ 291 G MY+T+GQRKGL +G G E +V +KD+ I+ V+ E L+S + + Sbjct: 245 MGTMYYTIGQRKGLNLG----GMNERMFVCEKDINKKIIYVSPLSLEDQYLISNQALVEN 300 Query: 292 LHWVDREPFTGTMRCTVKTRYRQTDIPCTVKALDDDRIEVIFD-EPVAAVTPGQSAVFYN 350 ++++ EP+ + +V+ R+RQ + ++ V+ + EP A+TPGQ AVFY Sbjct: 301 MNFI--EPYNPQIPISVRFRHRQNLVVVNSFLCIENTNNVLINYEPAKAITPGQYAVFYQ 358 Query: 351 GEVCLGGGIIEQR 363 + C+GGG+I Q Sbjct: 359 NDHCIGGGVIAQT 371 >UniRef50_Q1IPC9 tRNA-specific 2-thiouridylase mnmA n=2 Tax=Bacteria RepID=MNMA_ACIBL Length = 370 Score = 403 bits (1035), Expect = e-111, Method: Composition-based stats. Identities = 136/378 (35%), Positives = 207/378 (54%), Gaps = 28/378 (7%) Query: 2 SETAKKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNW----------EEDDGEEYCTA 51 ++ + V MSGGVDSS A +L+ +GY + GL M+ W + G C + Sbjct: 1 MNKSETIAVAMSGGVDSSTVAAMLRAEGYNLVGLTMQLWNQRRLAHHEGFGEPGVGRCCS 60 Query: 52 AADLADAQAVCDKLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAF 111 D+ DA+ V + L I + VN + +V + F+ +Y +GRTP P LCN +KF Sbjct: 61 LDDVYDARRVAETLAIPYYVVNQEDRFERDVVKPFVEDYLSGRTPIPCSLCNNHLKFDQL 120 Query: 112 LEFAAEDLGADYIATGHYVR--RADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFP 169 L A+ +GA+ IATGHY R G+ L R D KDQ+YFL+ L+ EQ++++LFP Sbjct: 121 L-RTAQQIGAEKIATGHYARNDFNAQTGRWELKRPADRAKDQTYFLFGLTQEQLSRTLFP 179 Query: 170 VGELEKPQVRKIAEDLGLVTAKKKDSTGICFIGERKFREFLGRYLPAQ-------PGKII 222 +G KP+VR+ A++ GL +K DS ICFI +++FL YL Q G+++ Sbjct: 180 LGHKTKPEVREDAKNHGLKLFEKPDSQEICFIPNGDYKKFLDAYLEEQGESLPDTSGELV 239 Query: 223 TVDGDEIGEHQGLMYHTLGQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRL 282 T G+ +G H G+ T+GQRKGLG+ T P YV++ + +VV + L Sbjct: 240 TSSGEVVGHHTGIHNFTVGQRKGLGV-----ATGSPLYVIELRGDKRQVVVG---NNDEL 291 Query: 283 MSVGLIAQQLHWVDREPFTGTMRCTVKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTP 342 ++ L A++++W+ MR K R++ T++ DD + V FD+P AVTP Sbjct: 292 LTRNLRAKRMNWIAVSDLAQPMRVHAKIRHKHEPAWATIEKTGDDEVLVTFDDPQRAVTP 351 Query: 343 GQSAVFYNGEVCLGGGII 360 GQ+ V Y+G+V +GGG I Sbjct: 352 GQAVVLYDGDVVVGGGWI 369 >UniRef50_Q2LWA6 tRNA-specific 2-thiouridylase mnmA 1 n=1 Tax=Syntrophus aciditrophicus SB RepID=MNMA1_SYNAS Length = 372 Score = 402 bits (1033), Expect = e-110, Method: Composition-based stats. Identities = 132/362 (36%), Positives = 205/362 (56%), Gaps = 15/362 (4%) Query: 5 AKKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEE-YCTAAADLADAQAVCD 63 K+V++ +SGGVDSSV+A LL+++GY+V G+ M ++ + C + DA+ VC+ Sbjct: 20 KKRVLLAISGGVDSSVAALLLKEEGYEVAGVTMCLGVREEENKVRCCGREAIEDARGVCE 79 Query: 64 KLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGADY 123 LGI + +++A V + F+ EY+ GRTPNP I CN+ +KF L+ A +G DY Sbjct: 80 ILGIPHYVLDYAPLLETCVIDKFVREYRLGRTPNPCIDCNRYLKFGHLLDSA-RTMGFDY 138 Query: 124 IATGHYVRRADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQVRKIAE 183 +ATGHY + + + L + D KDQ+YFLY + + LFP+ + K +VR+IA Sbjct: 139 LATGHYAKIERKESRWILKKAKDLVKDQTYFLYPIPVAALEHILFPLADRTKDEVREIAR 198 Query: 184 DLGLVTAKKKDSTGICFIGERKFREFLGRY-LPAQPGKIITVDGDEIGEHQGLMYHTLGQ 242 L A+K +S +CF+ + +R+FL P PG I+ G +GEH G +++T+GQ Sbjct: 199 QALLPIAEKPESQDLCFVTQDSYRDFLQEQGCPVHPGPIVDRSGRVLGEHSGTVFYTIGQ 258 Query: 243 RKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLHWVDREPFTG 302 R GLGI + P YVV DV N ++V+ + + + GL+A +++W+ E Sbjct: 259 RHGLGIS-----SPFPLYVVAIDVAGNSVIVSGKED---VYAQGLVAGEMNWLTPERPQ- 309 Query: 303 TMRCTVKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTPGQSAVFYNGEVCLGGGIIEQ 362 + R+R+ C + + DRI V F E AVTPGQ+ V Y + LGGG+IE+ Sbjct: 310 --EAEARIRHRKRTCSCRIVP-EGDRIRVYFAEDQDAVTPGQAVVLYQEDEVLGGGVIEE 366 Query: 363 RL 364 L Sbjct: 367 AL 368 >UniRef50_Q3B625 tRNA-specific 2-thiouridylase mnmA n=10 Tax=Chlorobiaceae RepID=MNMA_PELLD Length = 367 Score = 402 bits (1033), Expect = e-110, Method: Composition-based stats. Identities = 155/375 (41%), Positives = 220/375 (58%), Gaps = 21/375 (5%) Query: 1 MSETAKKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYCTAAADLADAQA 60 M KKVIVG+SGGVDSSV+A +L ++GY+V GL +K +E DG + ++ Sbjct: 1 MERKKKKVIVGLSGGVDSSVAACMLVREGYEVLGLHLKVLQEGDGSTVLEPSPMTISSR- 59 Query: 61 VCDKLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLG 120 ++ I + T+N AA + + V + F EY A RTPNP ++CNK IK++ LE AA+ LG Sbjct: 60 --EEFHIPVFTLNLAARFRNEVMDYFKEEYLAARTPNPCMVCNKTIKWRGLLEGAAQ-LG 116 Query: 121 ADYIATGHYVRRADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQVRK 180 AD +ATGHY R A +DG+ RL GLD KDQSYFL+ L+ E++++++ P+G L KP+VR Sbjct: 117 ADMVATGHYARTAFIDGRHRLFAGLDRKKDQSYFLWMLAQEELSRTILPLGGLTKPEVRD 176 Query: 181 IAEDLGLVTAKKKDSTGICFIGERKFREFLGRYLP-----AQPGKIITVDGDEIGEHQGL 235 +A GL A+KK+S ICF+ + + +L +P + G+I+ G IG H+G Sbjct: 177 LARSFGLTAAEKKESQEICFVPDDDYGSYLESAVPGLHRRVEGGEILDPSGQVIGHHKGY 236 Query: 236 MYHTLGQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLHWV 295 ++T+GQR+GLG T EP YV D N++ L S + L+W+ Sbjct: 237 PFYTIGQRRGLGT-----ATGEPLYVTAIDPIGNLVHTGPKS---ALFSTSVEVSHLNWI 288 Query: 296 DREPFTGTMRCTVKTRYRQTDIPCTVKALDDD----RIEVIFDEPVAAVTPGQSAVFYNG 351 +P M T K RYR PCT+ L ++F EP +A+TPGQ+AVFY G Sbjct: 289 GIDPPFAPMEATAKIRYRDHASPCTIIPLGPGPTGVTARIMFKEPKSALTPGQAAVFYRG 348 Query: 352 EVCLGGGIIEQRLPL 366 E LGGGIIE LP+ Sbjct: 349 EEVLGGGIIEGALPM 363 >UniRef50_B7J5X6 tRNA-specific 2-thiouridylase mnmA n=3 Tax=Acidithiobacillus RepID=MNMA_ACIF2 Length = 352 Score = 401 bits (1030), Expect = e-110, Method: Composition-based stats. Identities = 143/362 (39%), Positives = 202/362 (55%), Gaps = 16/362 (4%) Query: 5 AKKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYCTAAADLADAQAVCDK 64 KK ++ +SGGVDS+V+A L+Q QGY++ G+ M+ W C D+ DA +C + Sbjct: 3 DKKALIALSGGVDSAVAALLMQGQGYELTGVTMRLWPR----SRCCDEKDIEDAAEICAR 58 Query: 65 LGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGADYI 124 LGI +++ + V ++F+AEY+AGRTPNP CN+ +KF A L E LGA + Sbjct: 59 LGIPYTVLDYREAFRRQVVDVFVAEYQAGRTPNPCARCNQFLKFDALLAE-GEKLGATML 117 Query: 125 ATGHYVRRADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQVRKIAED 184 ATGHY R A+ + LLRG D KDQSYFL+ + +++ FPVG + K +VR +A Sbjct: 118 ATGHYARLAETSSGTALLRGRDHAKDQSYFLFAIGAGILSRLRFPVGGMNKDEVRAMARK 177 Query: 185 LGLVTAKKKDSTGICFIGERKFREFLGRYLP---AQPGKIITVDGDEIGEHQGLMYHTLG 241 GL A K+DS ICF+ + +R FL Y AQ G+++ G +G H G ++ T+G Sbjct: 178 HGLPVAAKQDSQDICFVPDGDYRRFLEDYAGLDMAQEGEMVDSSGQVLGHHPGTLHFTVG 237 Query: 242 QRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLHWVDREPFT 301 QRKGLG G+++P YV+ D N ++V E L + + +W+ Sbjct: 238 QRKGLG-----GGSDQPRYVLALDPAQNRVIVGGEDE---LYRGVVSLAECNWLTDLSPG 289 Query: 302 GTMRCTVKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTPGQSAVFYNGEVCLGGGIIE 361 T TVK RYR + L D R E+ F EP AVTPGQ+AV Y GE LGGG I+ Sbjct: 290 ETHAVTVKLRYRSRAESAMLHLLSDARAELRFREPQRAVTPGQAAVCYQGERLLGGGWIQ 349 Query: 362 QR 363 Sbjct: 350 GT 351 >UniRef50_B0MKE4 Putative uncharacterized protein n=3 Tax=Clostridiales RepID=B0MKE4_9FIRM Length = 387 Score = 400 bits (1027), Expect = e-110, Method: Composition-based stats. Identities = 142/366 (38%), Positives = 220/366 (60%), Gaps = 21/366 (5%) Query: 6 KKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEED--DGEEYCTAAADLADAQAVCD 63 +K+ + MSGGVDSSV+ LL+ + Y+V G +K + D C +A+D+ DA+A+ Sbjct: 31 EKLAIAMSGGVDSSVALVLLKDK-YEVSGYTLKLHDSRGTDDSGLCGSASDIEDAKAIAA 89 Query: 64 KLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGADY 123 K G+ + ++ + D V + F+ Y +GRTPNP + CN+ IKF A L+ A + G ++ Sbjct: 90 KFGVPHYLLDMRDLFSDTVQKSFVQSYLSGRTPNPCVECNETIKFGALLD-AVKKQGINH 148 Query: 124 IATGHYVR--RADVDGKSRLLRGLDS-----NKDQSYFLYTLSHEQIAQSLFPVGELEKP 176 IATGHYVR + G+ L + +++ KDQSY LY LS +Q+A S+FP+GE+ K Sbjct: 149 IATGHYVRSCYDEKSGRWLLKKAINADGTSNAKDQSYVLYRLSQQQLAASVFPLGEMTKD 208 Query: 177 QVRKIAEDLGLVTAKKKDSTGICFIGERKFREFLGRYLP--AQPGKIITVDGDEIGEHQG 234 ++R IA D GL+ + K DS ICF+ + + F+ RY G + +G+ IG H+G Sbjct: 209 EIRHIAADSGLINSDKPDSQDICFVPDGDYAGFIERYTGNTYPDGDFLDENGNVIGRHKG 268 Query: 235 LMYHTLGQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLHW 294 ++++T+GQR+G+G G +P YV+ K+ +NN + + + L + L A L+W Sbjct: 269 VIFYTIGQRRGIGT-----GFGKPMYVIGKNADNNTVTLGS---NELLFTDTLYADNLNW 320 Query: 295 VDREPFTGTMRCTVKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTPGQSAVFYNGEVC 354 + E +C KTRYRQT+ PCTV + + V+FDE + AVTPGQ VFY+G++ Sbjct: 321 IAFEYPESEFKCRAKTRYRQTEQPCTVYPQGRNTVRVVFDEKIRAVTPGQHVVFYDGDIV 380 Query: 355 LGGGII 360 LGGG+I Sbjct: 381 LGGGVI 386 >UniRef50_C9LN41 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase n=1 Tax=Dialister invisus DSM 15470 RepID=C9LN41_9FIRM Length = 350 Score = 399 bits (1025), Expect = e-109, Method: Composition-based stats. Identities = 143/369 (38%), Positives = 196/369 (53%), Gaps = 24/369 (6%) Query: 1 MSETAKKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYCTAAADLADAQA 60 M+E KKV+V MSGGVDS+++A LLQ+ GY V G M ++ D+ +AQ Sbjct: 1 MTEK-KKVVVAMSGGVDSTLTARLLQEAGYDVYGATMNQFDG----------QDMTEAQK 49 Query: 61 VCDKLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLG 120 + D LGI ++ Y D V F+ YK G TPNP ++C+ +IKF F + Sbjct: 50 IADFLGIPHKVIDVRKMYQDIVLSYFVDSYKNGITPNPCMMCDFKIKFGFFYDTVRAFFD 109 Query: 121 ADYIATGHYVRRADVD--GKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQV 178 Y ATGHY R K ++ + D KDQSY +Y L+ +Q+A LFP+G + K Sbjct: 110 CPYFATGHYARITYDGTRRKYQVEKATDLAKDQSYMMYHLTQDQLAHILFPLGRIYKKDT 169 Query: 179 RKIAEDLGLVTAKKKDSTGICFIG-ERKFREFLGRYLPA--QPGKIITVDGDEIGEHQGL 235 R+I+E+ GL T K +S ICF+ E+ + EFL + P +PG I G +G H+GL Sbjct: 170 RRISEEKGLPTYNKAESQDICFLTSEKSYAEFLQNHAPEAFRPGNITDTKGRILGTHKGL 229 Query: 236 MYHTLGQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLHWV 295 ++T+GQRKGLGI + P YVV N ++V + L GL+A +L + Sbjct: 230 PFYTIGQRKGLGI-----ASRTPLYVVSLHAGKNRVIVGS---NDDLFRSGLLANELDFT 281 Query: 296 DREPFTGTMRCTVKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTPGQSAVFYNGEVCL 355 D P + RC K RY CTV + R V FDEP A+TPGQS VFY L Sbjct: 282 DGAPPSQQFRCRAKIRYGIHVHNCTVTLDNHGRAAVKFDEPQRAITPGQSVVFYEENRLL 341 Query: 356 GGGIIEQRL 364 GGG I + L Sbjct: 342 GGGTIMKVL 350 >UniRef50_O75648 Mitochondrial tRNA-specific 2-thiouridylase 1 n=19 Tax=Tetrapoda RepID=MTU1_HUMAN Length = 421 Score = 398 bits (1024), Expect = e-109, Method: Composition-based stats. Identities = 159/390 (40%), Positives = 219/390 (56%), Gaps = 36/390 (9%) Query: 6 KKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYCTAAADLADAQAVCDKL 65 + V+ +SGGVDS+V+A LL+++GYQV G+FMKNW+ D CTA D DA VC L Sbjct: 5 RHVVCALSGGVDSAVAALLLRRRGYQVTGVFMKNWDSLDEHGVCTADKDCEDAYRVCQIL 64 Query: 66 GIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGADYIA 125 I H V++ EYW++VF FL EY+ GRTPNPDI+CNK IKF F +A ++LGAD IA Sbjct: 65 DIPFHQVSYVKEYWNDVFSDFLNEYEKGRTPNPDIVCNKHIKFSCFFHYAVDNLGADAIA 124 Query: 126 TGHYVRRADVD-----------------------GKSRLLRGLDSNKDQSYFLYTLSHEQ 162 TGHY R + D +LL+ DS KDQ++FL +S + Sbjct: 125 TGHYARTSLEDEEVFEQKHVKKPEGLFRNRFEVRNAVKLLQAADSFKDQTFFLSQVSQDA 184 Query: 163 IAQSLFPVGELEKPQVRKIAEDLGL-VTAKKKDSTGICFIGERKFREFLGRYLPAQPGKI 221 + +++FP+G L K V+KIA + L +KK+S G+CFIG+R F FL +YL +PG Sbjct: 185 LRRTIFPLGGLTKEFVKKIAAENRLHHVLQKKESMGMCFIGKRNFEHFLLQYLQPRPGHF 244 Query: 222 IT-VDGDEIGEHQGLMYHTLGQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHP 280 I+ D +G H+G +TLGQR +G G EPWYVV+KD + VA +HP Sbjct: 245 ISIEDNKVLGTHKGWFLYTLGQRANIG------GLREPWYVVEKDSVKGDVFVAPRTDHP 298 Query: 281 RLMSVGLIAQQLHWVDREPF-----TGTMRCTVKTRYRQTDIPCTVKALDDDRIEVIFDE 335 L L ++HW+ EP M C + R++ +PC + D + V + Sbjct: 299 ALYRDLLRTSRVHWIAEEPPAALVRDKMMECHFRFRHQMALVPCVLTLNQDGTVWVTAVQ 358 Query: 336 PVAAVTPGQSAVFYNGEVCLGGGIIEQRLP 365 V A+ GQ AVFY G+ CLG G I + P Sbjct: 359 AVRALATGQFAVFYKGDECLGSGKILRLGP 388 >UniRef50_Q503J2 Mitochondrial tRNA-specific 2-thiouridylase 1 n=4 Tax=Euteleostomi RepID=MTU1_DANRE Length = 416 Score = 397 bits (1021), Expect = e-109, Method: Composition-based stats. Identities = 158/391 (40%), Positives = 206/391 (52%), Gaps = 36/391 (9%) Query: 6 KKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYCTAAADLADAQAVCDKL 65 + V+ MSGGVDSSVSA LL++ GY V G+FMKNW+ + + C++ D DA VC L Sbjct: 5 RHVVCAMSGGVDSSVSALLLKRMGYHVTGVFMKNWDSQEEKGLCSSDRDCEDAYKVCKML 64 Query: 66 GIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGADYIA 125 I H V++ EYW VF L EY+ GRTPNPDI+CNK IKFK F ++A LGAD +A Sbjct: 65 DIPFHEVSYVKEYWHEVFSNLLWEYERGRTPNPDIICNKHIKFKHFYQYAVNTLGADAMA 124 Query: 126 TGHYVRRADVD-----------------------GKSRLLRGLDSNKDQSYFLYTLSHEQ 162 TGHY R + D RL +G D KDQ++FL +S + Sbjct: 125 TGHYARTSQEDEEVFQQKLTEAPKSLFRDRFEIRKPVRLYQGADLLKDQTFFLSQISQDA 184 Query: 163 IAQSLFPVGELEKPQVRKIAEDLGL-VTAKKKDSTGICFIGERKFREFLGRYLPAQPGKI 221 + +LFP+ L K V+KIA + G KKK+S GICFIG+R F F+ YL +PG Sbjct: 185 LRHTLFPLAGLTKGYVKKIAAEAGFQHVLKKKESMGICFIGKRDFENFILEYLEPRPGNF 244 Query: 222 IT-VDGDEIGEHQGLMYHTLGQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHP 280 ++ DG +G+H+G TLGQR +G G + W+VVDKDV + V HP Sbjct: 245 VSIEDGQIMGKHKGWFTLTLGQRARIG------GRADAWFVVDKDVTTADVFVCPSTFHP 298 Query: 281 RLMSVGLIAQQLHWVDREPF-----TGTMRCTVKTRYRQTDIPCTVKALDDDRIEVIFDE 335 L L + HW+ EP T M C R PCTV D + V+ E Sbjct: 299 ALFRDTLQTDRFHWIAEEPPAELVHTQMMDCHFCFNNRMPLTPCTVTLNLDGSVWVMVKE 358 Query: 336 PVAAVTPGQSAVFYNGEVCLGGGIIEQRLPL 366 P+ + GQ AV Y G CLG G I + P Sbjct: 359 PMRGMATGQFAVLYKGHECLGSGKIIRLGPT 389 >UniRef50_C2KV29 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase n=6 Tax=Bacteria RepID=C2KV29_9FIRM Length = 362 Score = 396 bits (1018), Expect = e-109, Method: Composition-based stats. Identities = 132/366 (36%), Positives = 203/366 (55%), Gaps = 19/366 (5%) Query: 6 KKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDG----EEYCTAAADLADAQAV 61 +K ++ MSGGVDSSV+A L+Q++GY G+ MK ++ + G C D+ DA+ V Sbjct: 2 EKALIAMSGGVDSSVAAALMQEKGYDCIGITMKLYDSETGQACRSRTCCTLEDVEDARQV 61 Query: 62 CDKLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGA 121 L + + +NF ++ V F+ Y+ G TPNP I CN+ +K + A E+L Sbjct: 62 ASTLSMPFYVLNFKDDFQKKVILPFVETYENGGTPNPCIRCNRFMKHDKLYQRA-EELSC 120 Query: 122 DYIATGHYVRRA--DVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGEL-EKPQV 178 YI TGHY R + G+ L + D KDQSY LY LS EQ+A +LFP+GE K +V Sbjct: 121 SYIVTGHYARIEKDESSGRYLLKKAKDEKKDQSYVLYFLSQEQLAHTLFPLGEYSSKEEV 180 Query: 179 RKIAEDLGLVTAKKKDSTGICFIGERKFREFLGRY--LPAQPGKIITVDGDEIGEHQGLM 236 R+IA+ G + + K DS ICF+ + +FL ++ P G + +G ++GEH+G + Sbjct: 181 REIADKYGFINSDKPDSQDICFVTNGDYGDFLEKFRGKPYPSGDFVDENGKKLGEHRGTV 240 Query: 237 YHTLGQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLHWVD 296 +T+GQRKGLG+ ++P YV K++E N +++ + + GL+A +W+ Sbjct: 241 RYTIGQRKGLGLSL-----KKPMYVSGKNIEKNQVIL---SDKEGIYFEGLLANDFNWIS 292 Query: 297 REPFTGTMRCTVKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTPGQSAVFYNGEVCLG 356 P T M KTRY +P V ++ + + F E AVT GQ+ V Y+G++ LG Sbjct: 293 L-PPTEDMAVEAKTRYNGKAVPAIVSVRENGDVFLRFPEKERAVTKGQAVVLYDGDLVLG 351 Query: 357 GGIIEQ 362 GG I + Sbjct: 352 GGTIVE 357 >UniRef50_UPI00016B2149 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase n=1 Tax=candidate division TM7 single-cell isolate TM7c RepID=UPI00016B2149 Length = 340 Score = 395 bits (1014), Expect = e-108, Method: Composition-based stats. Identities = 162/355 (45%), Positives = 223/355 (62%), Gaps = 18/355 (5%) Query: 7 KVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYCTAAADLADAQAVCDKLG 66 KV VGMSGGVDSS++A LL ++G+ V G++MKNW +D C A DLADA+ V +LG Sbjct: 2 KVFVGMSGGVDSSLTAALLIERGHNVTGVYMKNWSQDLPGMKCPWADDLADAKRVAVQLG 61 Query: 67 IELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGADYIAT 126 I+L +F EY +NV E ++ Y G TPNPDI+CN+E+KFK FLE A D GAD IAT Sbjct: 62 IDLKVYDFEKEYRENVVEYMISAYSQGYTPNPDIMCNQEVKFKLFLETALAD-GADMIAT 120 Query: 127 GHYVRRADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQVRKIAEDLG 186 GHY +RL D+NKDQ+YFLY ++ + ++++ FP+GE K +VR+++ED Sbjct: 121 GHYA----TTRDNRLFMASDANKDQTYFLYRVTSQALSKTFFPLGEYTKQKVRQMSEDRH 176 Query: 187 LVTAKKKDSTGICFIGERKFREFLGRYLPAQPGKIITVD-GDEIGEHQGLMYHTLGQRKG 245 L TAKKKDS GICF+G+ REFL +Y+ +PG II G +IG H G +++T+GQR G Sbjct: 177 LFTAKKKDSQGICFVGKIGIREFLSQYVDTKPGDIIDQKTGKKIGTHDGAIFYTIGQRHG 236 Query: 246 LGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLHWVDREPFTGTMR 305 L IGG P+YVV K++++N + V+ H + + HW++ P G Sbjct: 237 LNIGGGL-----PYYVVGKNMQSNEVYVSNDINHNGIWRSETKIESKHWINNVPKDGN-- 289 Query: 306 CTVKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTPGQSAVFYNGEVCLGGGII 360 + R+R + T+ +VIFDEP A+ PGQS V Y+GE CLGGGII Sbjct: 290 YLARIRHRAPLVKITLLGS-----KVIFDEPQRAIAPGQSVVIYDGEECLGGGII 339 >UniRef50_B3DUT9 tRNA(5-methylaminomethyl-2-thiouridine)-methyltransferase n=1 Tax=Methylacidiphilum infernorum V4 RepID=B3DUT9_METI4 Length = 367 Score = 395 bits (1014), Expect = e-108, Method: Composition-based stats. Identities = 132/367 (35%), Positives = 200/367 (54%), Gaps = 16/367 (4%) Query: 2 SETAKKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEE---DDGEEYCTAAADLADA 58 + +++VGMSGGVDS+V+A+LL+++G+ V G+ +K W + E C + DA Sbjct: 8 IKKNTRIVVGMSGGVDSTVAAYLLKREGFDVVGITLKIWTDRCMHISSEKCCGPDAINDA 67 Query: 59 QAVCDKLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAED 118 + + ++GI + ++ A + V FL EY GRTPNP + CN++IKF + Sbjct: 68 RNMAAQIGIPHYVLDEADCFEKEVISYFLREYSLGRTPNPCVKCNEKIKFGRLWTRV-QS 126 Query: 119 LGADYIATGHYVRRADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQV 178 G +Y+ATGHY + D RL + D +DQSYFL++LS Q+++ + P+G LEK +V Sbjct: 127 WGVEYLATGHYALVENQDHIPRLKKAKDKRRDQSYFLFSLSAGQLSRMITPLGNLEKKEV 186 Query: 179 RKIAEDLGLVTAKKKDSTGICFIGERKFREFLGRYLPA---QPGKIITVDGDEIGEHQGL 235 R IA++ GL K++S ICF+ + ++EF+ G II +G IGEHQG+ Sbjct: 187 RAIAKEAGLNVWNKEESRDICFVPGKNYKEFIQGKKTPSNTHSGFIIDEEGKVIGEHQGI 246 Query: 236 MYHTLGQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLHWV 295 +T+GQRKGL G P YVVD D E+ + L A Q HW+ Sbjct: 247 EGYTVGQRKGL-----PGGQGRPLYVVDIDPESKTIRAGS---LKSLFKTHCYASQAHWI 298 Query: 296 DREPFTGTMRCTVKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTPGQSAVFYNGEVCL 355 + TVK RY ++ + L DR + F P ++PGQ+AV Y+G++ L Sbjct: 299 -EKDIESPRPVTVKLRYNYPEVEALLTLLGKDRFRLDFSSPQMGISPGQAAVCYDGDIVL 357 Query: 356 GGGIIEQ 362 GGG IE+ Sbjct: 358 GGGWIER 364 >UniRef50_A9SZR3 Predicted protein n=1 Tax=Physcomitrella patens subsp. patens RepID=A9SZR3_PHYPA Length = 421 Score = 394 bits (1013), Expect = e-108, Method: Composition-based stats. Identities = 166/375 (44%), Positives = 228/375 (60%), Gaps = 19/375 (5%) Query: 3 ETAKKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEY--CTAAADLADAQA 60 E V VG+SGGVDSS++A LLQ+QGY+V G++M+NW+ D C+A D DAQ Sbjct: 35 ERRGVVAVGISGGVDSSIAALLLQRQGYEVFGVYMRNWDARDEAGGGHCSADQDYEDAQR 94 Query: 61 VCDKL-GIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDL 119 VC+ L GI+LH +++ +YW VFE F ++ G TPNPD+ CN+ IKF A LE A + + Sbjct: 95 VCEHLAGIKLHHLDYQKKYWTQVFENFTQKFAMGLTPNPDLDCNQHIKFDALLENALQ-M 153 Query: 120 GADYIATGHYVRRADV--DGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQ 177 GAD ATGHY R + G +LLRG+D +KDQSYFL ++ + LFP+G L K Q Sbjct: 154 GADKFATGHYARLSRPQCGGPVQLLRGIDEDKDQSYFLASVGSAAFERVLFPLGGLTKAQ 213 Query: 178 VRKIAEDLGLVTAKKKDSTGICFIGERKFREFLGRYLPAQPGKIITVDGDE-IGEHQGLM 236 VR +A GLVTA K+ S GICF+G RKFR+F+ Y+ +PG + VDG+ +G H G+ Sbjct: 214 VRDLALSEGLVTATKRSSAGICFVGRRKFRDFISEYVEMEPGPFVCVDGNTHLGLHTGIA 273 Query: 237 YHTLGQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLHWVD 296 +T GQR G+ G +P+YVV KDV+NN++ VA G +HP L +A W+ Sbjct: 274 AYTHGQRAGIS------GVPKPFYVVGKDVQNNVVYVAMGADHPALFCTSAVAGDPFWIS 327 Query: 297 REPFT-----GTMRCTVKTRYRQTDIPCTV-KALDDDRIEVIFDEPVAAVTPGQSAVFYN 350 P + C K RYRQ+ CTV + + + F+EP A+TPGQ+ V Y+ Sbjct: 328 GSPPKQLQDGQPLTCMFKARYRQSLERCTVCFLDSKNEVAIRFEEPTRAITPGQALVLYD 387 Query: 351 GEVCLGGGIIEQRLP 365 G+VCLG +I P Sbjct: 388 GDVCLGASVIAYPGP 402 >UniRef50_B5YCZ9 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase n=2 Tax=Dictyoglomus RepID=B5YCZ9_DICT6 Length = 345 Score = 393 bits (1011), Expect = e-108, Method: Composition-based stats. Identities = 145/359 (40%), Positives = 209/359 (58%), Gaps = 21/359 (5%) Query: 7 KVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYCTAAADLADAQAVCDKLG 66 KV VGMSGGVDSS +A+LL+++GY+V GL M D + DA+ + L Sbjct: 4 KVAVGMSGGVDSSTTAYLLKKEGYEVIGLTMNIAYSD----------SIKDAEKIAKYLN 53 Query: 67 IELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGADYIAT 126 I V+ E+ + + + F+ YK+G TPNP CN+ IKF L+ A ++LGA+Y+AT Sbjct: 54 IPHFYVDLRKEFEEQIIKYFIDSYKSGYTPNPCTFCNRIIKFGLLLKKA-QELGAEYLAT 112 Query: 127 GHYVRRADVDGKSR--LLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQVRKIAED 184 GHYVR+ + K L R D KDQSYFL L+ EQI +SLFP+G+L K +VRK+AE+ Sbjct: 113 GHYVRKVWDEEKKVFLLKRAKDLKKDQSYFLAYLTQEQIEKSLFPLGDLTKNEVRKLAEE 172 Query: 185 LGLVTAKKKDSTGICFIGERKFREFLGRYLPAQPGKIITVDGDEIGEHQGLMYHTLGQRK 244 +GL + K++S ICF+ +R +R+FL RYL + GKIIT DG E+G H G+ T+GQR+ Sbjct: 173 IGLFVSDKEESQDICFLPDRDYRKFLSRYLVEKKGKIITEDGVEVGYHDGVFSFTIGQRR 232 Query: 245 GLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLHWVDREPFTGTM 304 GL + K P YV E I+VVA + ++ S + A+ +++ P + Sbjct: 233 GLRVALGK-----PVYVKKIIPEEGIVVVA---DREKIFSREVYAKNVNYPSGMPREKEL 284 Query: 305 RCTVKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTPGQSAVFYNGEVCLGGGIIEQR 363 RY P +K L + I + F+EP A+TPGQ V Y + L GG+IE++ Sbjct: 285 EVKAMIRYNMEPQPALLKILSEKEIYLTFEEPQWAITPGQILVCYKDDYVLCGGVIEEK 343 >UniRef50_B4D711 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D711_9BACT Length = 363 Score = 393 bits (1009), Expect = e-108, Method: Composition-based stats. Identities = 138/370 (37%), Positives = 200/370 (54%), Gaps = 22/370 (5%) Query: 12 MSGGVDSSVSAWLLQQQGYQVEGLFMKNWEED---DGEEYCTAAADLADAQAVCDKLGIE 68 MSGGVDSSV+A+LL++QGY V G+ MK W +D E+ C +ADA+ V LG+ Sbjct: 1 MSGGVDSSVAAYLLKRQGYDVVGVTMKVWPQDCISRAEDKCCGPQAIADARGVAHALGVP 60 Query: 69 LHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGADYIATGH 128 + V+ + V + F EYK GRTPNP ++CN+++KF A + LGA+YIATGH Sbjct: 61 HYVVDEGENFERLVIDYFTEEYKNGRTPNPCVMCNEKVKFGNLWGKA-KALGAEYIATGH 119 Query: 129 YVRRADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQVRKIAEDLGLV 188 Y ++ L +G D KDQSYFL++L Q+ ++ P+GE+ KP++R IA LGL Sbjct: 120 YAIIEHHADRAVLRKGRDPRKDQSYFLFSLRQAQLQHAICPLGEMSKPEIRAIARQLGLK 179 Query: 189 TAKKKDSTGICFIGERKFREFLGRYLPA---QPGKIITVDGDEIGEHQGLMYHTLGQRKG 245 A+K+DS ICF+ ++ FL ++ A PG I G+ + EH+G+ T+GQRKG Sbjct: 180 VAEKEDSQEICFVPGNDYKAFLKSHMGAGEFHPGGIYDKAGNRLAEHEGIEMFTIGQRKG 239 Query: 246 LGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLHWV------DREP 299 L G+ P YV+D D + ++V + L++ W Sbjct: 240 L-----PGGSPRPRYVIDIDPVTSSVIVG---DAEDLITGEFTIDHCMWHPSTSLRAGGS 291 Query: 300 FTGTMRCTVKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTPGQSAVFYNGEVCLGGGI 359 T VK RY TV ++ V +P AVTPGQ+AV Y G+ LGGG Sbjct: 292 ATEPFEVNVKIRYGHAGADATVYPGENGEARVRLHKPQRAVTPGQAAVCYRGDEVLGGGW 351 Query: 360 IEQRLPL-PV 368 I +++ + PV Sbjct: 352 IVRQMAVEPV 361 >UniRef50_D0LWB4 tRNA(5-methylaminomethyl-2-thiouridylate)-methyl transferase n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LWB4_HALO1 Length = 391 Score = 391 bits (1006), Expect = e-107, Method: Composition-based stats. Identities = 129/370 (34%), Positives = 200/370 (54%), Gaps = 19/370 (5%) Query: 8 VIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEED----DGEEYCTAAADLADAQAVCD 63 ++ +SGGVDS+V+A +L +QG++V G+ M+ ++ C D+ DA+ VC Sbjct: 7 IVAALSGGVDSAVTAAMLVEQGHRVVGMTMRLYDASGTSASVGGRCCGPRDIEDARRVCA 66 Query: 64 KLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGADY 123 LGI + VNF ++ V + F+ Y AG TPNP + CN+ IKF L A LGA+ Sbjct: 67 HLGIPFYVVNFEVDFAHTVIDDFVDTYLAGETPNPCVKCNQHIKFTPLLARA-RALGAET 125 Query: 124 IATGHYVRRADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQVRKIAE 183 +ATGHY R D RL RG D++KDQSYFL+++ E++A FP+G + K +VR A Sbjct: 126 VATGHYARLEDTGAGIRLRRGRDASKDQSYFLFSMPREELASVRFPLGAMTKDEVRDKAR 185 Query: 184 DLGLVTAKKKDSTGICFIGERKFREFLGRYL------PAQPGKIITVDGDEIGEHQGLMY 237 GL A K DS ICF+ + + F+ G I+ +G +G H+G+ + Sbjct: 186 AYGLPNAAKADSQEICFVPDGDYAGFVEAEALRRSRPVPASGDIVDGEGQVLGRHRGVHH 245 Query: 238 HTLGQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLHWVDR 297 +T+GQR+GLG T+ + P YV+ D + +VV + + + + W+ Sbjct: 246 YTIGQRRGLGNLRTQTRSPTPLYVIGVDRARDRVVVGPREQAA---RRSVPVRDVRWLST 302 Query: 298 EPFTGTMRCTVKTRYRQTDIPCTVKALDDD-----RIEVIFDEPVAAVTPGQSAVFYNGE 352 P G + V+ RYR + +P T++ + R+ V FD+ +PGQ+AVFY+G+ Sbjct: 303 PPAEGRLSAGVQVRYRSSPLPATLELCGEGDERGKRVRVHFDDAAVIASPGQAAVFYDGD 362 Query: 353 VCLGGGIIEQ 362 LGGG I + Sbjct: 363 TVLGGGWIAR 372 >UniRef50_B5DNY9 GA22395 n=14 Tax=Neoptera RepID=B5DNY9_DROPS Length = 387 Score = 390 bits (1002), Expect = e-107, Method: Composition-based stats. Identities = 152/381 (39%), Positives = 231/381 (60%), Gaps = 24/381 (6%) Query: 1 MSETAKKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYCTAAADLADAQA 60 M ++VGMSGGVDS+VSA LL+++G++V G+FM+NW+E D C+ DL DA+ Sbjct: 1 MIRN---IVVGMSGGVDSAVSAHLLRERGHRVMGVFMRNWDEHDEAGRCSGEQDLKDAEW 57 Query: 61 VCDKLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLG 120 C +LGIEL VN+ EYW VF FL +Y+ G TPNPDILCN+ IKF F A + LG Sbjct: 58 ACQRLGIELRQVNYVKEYWTAVFSAFLDDYQQGLTPNPDILCNRHIKFDLFHRHALDKLG 117 Query: 121 ADYIATGHYVR--------RADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGE 172 D +ATGHY R G++RLL D+ KDQ++FL + + + +++FP+G+ Sbjct: 118 YDAVATGHYARNSLGNFLEHRADGGEARLLIPADTFKDQTFFLAGIPRQALQRTMFPLGD 177 Query: 173 LEKPQVRKIAEDLGL-VTAKKKDSTGICFIGERKFREFLGRYLPAQPGKIITVD-GDEIG 230 L K +V+ +A +GL A K++STGICF+G+R F+ F+ Y+ ++ G+ + +D G +G Sbjct: 178 LAKNEVKLLARRIGLQRLAHKRESTGICFVGKRDFKSFIREYIASKSGQFVDIDSGAIVG 237 Query: 231 EHQGLMYHTLGQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQ 290 H+G+ T+GQR LG +P++V K+ +N + VA GHEHP L+S + + Sbjct: 238 SHEGIHQWTVGQRCRLGSFL------QPYFVARKEASSNTIYVAAGHEHPALLSTCIHIE 291 Query: 291 QLHWVDRE-----PFTGTMRCTVKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTPGQS 345 +W+ + G++RC + ++ + + C +++ D EV+ D P+ A+TPGQ Sbjct: 292 APNWLCVQSQQRLASAGSLRCRFRFQHTKPLVDCCLRSCPDGGFEVLLDIPLRAITPGQY 351 Query: 346 AVFYNGEVCLGGGIIEQRLPL 366 AVFY+ CLG G I PL Sbjct: 352 AVFYDDVACLGAGRIMSAHPL 372 >UniRef50_B7PXE7 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase, putative n=1 Tax=Ixodes scapularis RepID=B7PXE7_IXOSC Length = 384 Score = 390 bits (1001), Expect = e-107, Method: Composition-based stats. Identities = 152/373 (40%), Positives = 214/373 (57%), Gaps = 14/373 (3%) Query: 1 MSETAKKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYCTAAADLADAQA 60 M+ +KV+ GMSGGVDSSV+A+LL++ GY V G+FM+NW+ D + +C AD DA+ Sbjct: 1 MAWRFRKVVCGMSGGVDSSVAAFLLRKSGYDVTGVFMRNWDPHDADSHCDLDADETDAKW 60 Query: 61 VCDKLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLG 120 VCD LGI TV+F YW NVF L EY+ G TPNPDI+CN+ IKF AF A + G Sbjct: 61 VCDTLGIPFMTVDFVKPYWHNVFSPMLQEYQDGLTPNPDIMCNRVIKFGAFHRHAVKRFG 120 Query: 121 ADYIATGHYVRRADV-DGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQVR 179 AD +ATGHY R ++ DG LL+G+D KDQS+FL + + ++LFP+GE K QV+ Sbjct: 121 ADAVATGHYARIRNLPDGSVELLQGVDPVKDQSFFLSQVGQAALQRTLFPLGEATKGQVK 180 Query: 180 KIAEDLGLV-TAKKKDSTGICFIGERKFREFLGRYLPAQPGKIITVD-GDEIGEHQGLMY 237 +A LGL A KK+S G+CFIG++ F+ F+ +Y+ + G + ++ G +G H G+ Sbjct: 181 ALARSLGLHRVADKKESMGMCFIGKQDFQSFVEKYVEPKRGTFVDIETGKVVGSHSGVHA 240 Query: 238 HTLGQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLHWVDR 297 TLGQR LG G ++V ++VA G +HP L + HW+ Sbjct: 241 WTLGQRCRLG------GLRSAYFVARLCPITQQILVASGWDHPALRWREMRTGAPHWIRL 294 Query: 298 EPFTGT----MRCTVKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTPGQSAVFYNGE- 352 G RC K+++ +PCTV D + V+ D A++PGQ AVFY + Sbjct: 295 PLVGGGGPPLARCLFKSQHLDPPVPCTVAEGPDGGLAVLLDHHKRAISPGQFAVFYGEDS 354 Query: 353 VCLGGGIIEQRLP 365 C G I + P Sbjct: 355 QCFGSAKITELGP 367 >UniRef50_B1VAX7 tRNA-specific 2-thiouridylase mnmA n=4 Tax=Bacteria RepID=MNMA_PHYAS Length = 375 Score = 388 bits (998), Expect = e-106, Method: Composition-based stats. Identities = 168/369 (45%), Positives = 227/369 (61%), Gaps = 14/369 (3%) Query: 6 KKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEE---------DDGEEYCTAAADLA 56 KKV+VG+SGGVDS+VSA LL++ GY+VE +FM+NW+ + C D Sbjct: 2 KKVVVGLSGGVDSAVSALLLKKAGYEVEAVFMRNWDSQLNFDFQGNPTLNDVCPQELDYK 61 Query: 57 DAQAVCDKLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAA 116 DA V +LGI+LH VNF EYW VF F+ +K TPNPDILCN EIKFKAF+ +A Sbjct: 62 DALKVSLQLGIKLHRVNFIEEYWQKVFLYFINAFKNNLTPNPDILCNNEIKFKAFINYAT 121 Query: 117 EDLGADYIATGHYVR-RADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEK 175 L YIA GHY R D + K L LD NKDQ+YFL L Q+ LFP+ +L K Sbjct: 122 SKLKPQYIAMGHYARLIYDKNQKVSLACPLDKNKDQTYFLSQLKTSQLKNILFPLADLTK 181 Query: 176 PQVRKIAEDLGLVTAKKKDSTGICFIGERKFREFLGRYLPAQPGKIITVDGDEIGEHQGL 235 +VRKIA + GL+ A KKDSTGICFIGER F +FL YLPAQ G I +DG + H+G+ Sbjct: 182 KEVRKIALENGLINACKKDSTGICFIGERNFFQFLNNYLPAQKGSIKRLDGTFLTYHKGV 241 Query: 236 MYHTLGQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLHWV 295 +++T+GQRK LG+G G +EP++VV K+++ N L V +HP L S + + W Sbjct: 242 IHYTIGQRKNLGLGNFSSG-QEPFFVVGKNLKTNTLYVEPNSQHPHLYSDRALIIDVTWR 300 Query: 296 DREPFTGTMRCTVKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTPGQSAVFYNGEVCL 355 + T K RYRQ + T+ LD + +E+++ + + AVTPGQ FY+ ++CL Sbjct: 301 GEKTKTQ---IQAKMRYRQPNQKVTLNWLDANTLEILYPQKIKAVTPGQICAFYDDDICL 357 Query: 356 GGGIIEQRL 364 G G+I++ Sbjct: 358 GAGVIKEVY 366 >UniRef50_A5FHA9 tRNA-specific 2-thiouridylase mnmA n=26 Tax=Bacteria RepID=MNMA_FLAJ1 Length = 395 Score = 388 bits (997), Expect = e-106, Method: Composition-based stats. Identities = 163/400 (40%), Positives = 227/400 (56%), Gaps = 50/400 (12%) Query: 6 KKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEY--CTAAADLADAQAVCD 63 K+V+VG+SGGVDSSV+A+LLQQQGY+V GLFMKNW +D C D DA V + Sbjct: 2 KRVVVGLSGGVDSSVAAYLLQQQGYEVIGLFMKNWHDDSVTISNECPWLEDSNDALLVAE 61 Query: 64 KLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGADY 123 KLGI TV+ + EY + + + EY+ GRTPNPD+LCN+EIKF F++ A LGADY Sbjct: 62 KLGIPFQTVDLSEEYKEKIVDYMFNEYEKGRTPNPDVLCNREIKFDVFMKIAL-SLGADY 120 Query: 124 IATGHYVRRADVDG----KSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQVR 179 +ATGHY ++++++ +L+ G D NKDQSYFL LS EQ++++LFP+G L KP+VR Sbjct: 121 VATGHYCQKSEIEVDGKTVYQLIAGNDVNKDQSYFLCQLSQEQLSKALFPIGALTKPEVR 180 Query: 180 KIAEDLGLVTAKKKDSTGICFIGERKFREFLGRYLPAQPGKIITVD-------------- 225 +IA ++ LVTA+KKDS G+CFIG+ + EFL + L + G I+ +D Sbjct: 181 EIAAEMELVTAEKKDSQGLCFIGKVRLPEFLQQKLQPKEGTIVQIDKNDPIYNVEKQAGL 240 Query: 226 -------------------GDEIGEHQGLMYHTLGQRKGLGIGGTKEGTEEPWYVVDKDV 266 G +G+HQG Y T+GQRKGL +G GT +P +V+ DV Sbjct: 241 SLEEELKIESQKLNYRPEMGKVMGKHQGAHYFTVGQRKGLNVG----GTTDPLFVIATDV 296 Query: 267 ENNILVVAQGHEHPRLMSVGLIAQQ--LHWVDREPFTGT---MRCTVKTRYRQTDIPCTV 321 + N + HP L L +HWV + M + RYRQ T+ Sbjct: 297 DTNTIYTGLTSNHPGLFKKALFVGNSEVHWVREDLKLKEGEQMEVMARIRYRQPLQKATL 356 Query: 322 KALDDDRIEVIFDEPVAAVTPGQSAVFYNGEVCLGGGIIE 361 + + V FDEP +A+T GQ +Y +G G+I Sbjct: 357 HQFANG-MYVHFDEPQSAITEGQFVAWYLENELVGSGVIS 395 >UniRef50_C7N321 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase n=1 Tax=Slackia heliotrinireducens DSM 20476 RepID=C7N321_SLAHD Length = 353 Score = 388 bits (997), Expect = e-106, Method: Composition-based stats. Identities = 142/361 (39%), Positives = 208/361 (57%), Gaps = 17/361 (4%) Query: 6 KKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDD---GEEYCTAAADLADAQAVC 62 ++V+VGMSGGVDSSV+A+LL +QGY+V G M ++ + + DL DA++V Sbjct: 3 QRVLVGMSGGVDSSVTAYLLLRQGYEVVGATMNLYDPGRLGVPDVRDGESNDLEDARSVA 62 Query: 63 DKLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGAD 122 ++LGI H ++F E+ +NV F Y G TPNP I CN+ +KF L+ AA +LG D Sbjct: 63 NRLGIAHHVLDFGCEFENNVVRPFAQAYADGLTPNPCIACNRHLKFGLMLK-AARELGCD 121 Query: 123 YIATGHYVRR-ADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQVRKI 181 IATGHY R +DG+ L++GLD KDQ+Y LY ++ +Q+A ++ P+GE K QVR I Sbjct: 122 GIATGHYARIAQRLDGRFVLMKGLDDAKDQAYVLYHMTQDQLAHTVLPLGEYTKQQVRAI 181 Query: 182 AEDLGLVTAKKKDSTGICFIGERKFREFLGRYLP--AQPGKIITVDGDEIGEHQGLMYHT 239 A + G A+K +S ICF+ + + FL RY +PG ++ +G +G+H+G + +T Sbjct: 182 AAEQGFANARKHESQDICFVPDGDYVGFLERYAGLVPEPGDVLDENGAVLGQHRGAIRYT 241 Query: 240 LGQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLHWVDREP 299 LGQRKG+GI + + YV KD+ N + + L++ G +W+ + Sbjct: 242 LGQRKGIGI-----ASTQALYVTAKDMAANTITMGP---ADALLADGCTVGNWNWILPD- 292 Query: 300 FTGTMRCTVKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTPGQSAVFYNGEVCLGGGI 359 G + VKT YRQ V +D + FDEP PGQSAV Y G+ LGGGI Sbjct: 293 -EGPVHAMVKTHYRQKPHGAMVVPQEDGTVRFDFDEPSRLAAPGQSAVAYIGDTVLGGGI 351 Query: 360 I 360 + Sbjct: 352 V 352 >UniRef50_Q2RZN9 tRNA-specific 2-thiouridylase mnmA n=11 Tax=Bacteroidetes RepID=MNMA_SALRD Length = 383 Score = 388 bits (996), Expect = e-106, Method: Composition-based stats. Identities = 148/378 (39%), Positives = 198/378 (52%), Gaps = 24/378 (6%) Query: 1 MSETAKKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEE------YCTAAAD 54 MS+ +V+V MSGGVDSSV+A LL+++GY V GL MK W+ C + Sbjct: 1 MSKKG-RVLVAMSGGVDSSVTAVLLKERGYDVVGLTMKTWDYSTSGGRDGKEVGCCSIES 59 Query: 55 LADAQAVCDKLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEF 114 + DA+ V + G V+ E+ D V E F EY +GRTPNP +LCN IK+ A L+ Sbjct: 60 MNDARVVATEHGFPHFVVDLREEFGDWVIERFTDEYLSGRTPNPCVLCNTHIKWDALLQR 119 Query: 115 AAEDLGADYIATGHYVRRADVD--GKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGE 172 A +DL +YIATGHY D + L RGLD NKDQSY L+ L E +A+S+FP+G Sbjct: 120 A-DDLDCEYIATGHYANVRYDDERDRYLLSRGLDRNKDQSYALWGLPQEHLARSIFPLGA 178 Query: 173 LEKPQVRKIAEDLGLV-TAKKKDSTGICFIGERKFREFLGRYLPAQP-----GKIITVDG 226 EKP++R++A + GL A K DS ICFI + + FL + G + DG Sbjct: 179 YEKPEIREMAAEFGLDNVADKPDSYEICFIPDNDYPRFLKDRVDGLEEEVSGGTFVLSDG 238 Query: 227 DEIGEHQGLMYHTLGQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVG 286 +GEH G ++T+GQR+GL + E YV D D E N + V E LM Sbjct: 239 TVVGEHDGYPFYTIGQRRGLDLALG-----ERVYVTDIDPETNTITVGPKEE---LMEQT 290 Query: 287 LIAQQLHWVDREPFTGTMRCTVKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTPGQSA 346 L A +++ V G RY C D+D ++V F EP A+TPGQS Sbjct: 291 LTAHEINLVKYPELDGERPAWGTIRYNDDGAGCLAWQPDEDTLKVAFAEPKRAITPGQSL 350 Query: 347 VFYNGEVCLGGGIIEQRL 364 V Y E LGGG I + Sbjct: 351 VLYEDEDVLGGGWIHEVG 368 >UniRef50_C1XSA6 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase n=4 Tax=Deinococci RepID=C1XSA6_9DEIN Length = 371 Score = 387 bits (995), Expect = e-106, Method: Composition-based stats. Identities = 148/368 (40%), Positives = 211/368 (57%), Gaps = 19/368 (5%) Query: 1 MSETAKKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEE---DDGEEYCTAAADLAD 57 M + +V+V MSGGVDSSVSA LL+ QGY+V G M+ W + DD E C + + Sbjct: 1 MLVSKGRVLVAMSGGVDSSVSAALLKAQGYEVIGAMMRFWPDNKKDDCFETCCSPDAAYE 60 Query: 58 AQAVCDKLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAE 117 A+ V D +G+ + +++ E+ + + + F+A Y AG TPNP + CN +KF + L+ A Sbjct: 61 ARRVADIVGVPFYLLDYREEFQEKIIDPFIAGYAAGETPNPCVNCNTRVKFDSLLKKA-R 119 Query: 118 DLGADYIATGHYVRRADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQ 177 LG D++ATGHYV R + L RG D KDQ+YFL+ E I +FPVG LEKPQ Sbjct: 120 MLGCDFVATGHYVIREG----NALFRG-DPKKDQTYFLWGTPKEAIPHMMFPVGHLEKPQ 174 Query: 178 VRKIAEDLGLVTAKKKDSTGICFIGERKFREFLGRYLPAQPGKIITVD-GDEIGEHQGLM 236 VR IAE GL TAKK +S ICF+ + +EFL +L A+PG ++ ++ G+ IGEH G Sbjct: 175 VRAIAEQYGLPTAKKPESQNICFV-QGDLKEFLSNHLTARPGPLVDLETGEVIGEHAGAQ 233 Query: 237 YHTLGQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLHWVD 296 ++T+GQ+KGLG+ T YVV + N ++V + GL A++++ + Sbjct: 234 FYTVGQKKGLGLF----KTHLERYVVRVNPATNEVIVGPRE---ACLWSGLEAREVNLLV 286 Query: 297 REPFTGTMRCTVKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTPGQSAVFYNGEVCLG 356 V+ RYR + V+ L D + V EP AVTPGQS V Y G+ LG Sbjct: 287 EPEELPETL-EVQVRYRTKPVLGKVERLGDGGMTVRLAEPQFAVTPGQSMVLYQGDRLLG 345 Query: 357 GGIIEQRL 364 GG I++ L Sbjct: 346 GGFIQRPL 353 >UniRef50_B8FEQ6 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase n=1 Tax=Desulfatibacillum alkenivorans AK-01 RepID=B8FEQ6_DESAA Length = 356 Score = 386 bits (993), Expect = e-106, Method: Composition-based stats. Identities = 131/361 (36%), Positives = 195/361 (54%), Gaps = 13/361 (3%) Query: 7 KVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYCTAAADLADAQAVCDKLG 66 ++ + MSGGVDS +SA+LL+Q + G+ E++G A+A +L Sbjct: 4 RIAIAMSGGVDSMISAYLLKQTCRDMVGIHFITGFENEGAPPGPDGVPEPLARA-SKELD 62 Query: 67 IELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGADYIAT 126 + + VN E+ +V F+ Y GRTPNP ++CN+ +KF A L+ A A+ IAT Sbjct: 63 LPIEVVNLQEEFHTHVVAPFVDTYLKGRTPNPCMVCNRTVKFGALLDAARNRFNAEKIAT 122 Query: 127 GHYVRRADVD-GKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQVRKIAEDL 185 GHY R G+ RL++G D KDQSYFL LS Q+ ++FP+GE K Q+R+ A +L Sbjct: 123 GHYARVRPDSAGRFRLVKGADLKKDQSYFLGFLSQAQLGAAVFPLGEFTKDQIREKAVEL 182 Query: 186 GLVTAKKKDSTGICFIGERKFREFLGRY--LPAQPGKIITVDGDEIGEHQGLMYHTLGQR 243 GL K +S CFI + ++R+FL P++PG ++ V G+ IG HQG+ T+GQR Sbjct: 183 GLDKYTKPESQETCFIADDRYRDFLQNQPGFPSRPGDVVNVQGEVIGRHQGVFAFTIGQR 242 Query: 244 KGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLHWVDREPFTGT 303 +G+ I E +YV D N + V L+S G+ ++W+ P Sbjct: 243 RGINIP-----ASEAYYVQAIDPAANRITVCFKS---GLLSRGVHVGGVNWIVP-PQKNA 293 Query: 304 MRCTVKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTPGQSAVFYNGEVCLGGGIIEQR 363 + RYR + ++ L+D + V FDEP +AVTPGQ AVFY + LG G I++ Sbjct: 294 FEAATRIRYRHKEAASAIEVLEDGTVNVWFDEPQSAVTPGQGAVFYQEDEVLGAGWIDKP 353 Query: 364 L 364 L Sbjct: 354 L 354 >UniRef50_D2MI59 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase n=1 Tax=Candidatus Poribacteria sp. WGA-A3 RepID=D2MI59_9BACT Length = 372 Score = 385 bits (989), Expect = e-105, Method: Composition-based stats. Identities = 135/361 (37%), Positives = 190/361 (52%), Gaps = 23/361 (6%) Query: 12 MSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDD---------GEEYCTAAADLADAQAVC 62 MSGGVDSSV+A LL +QGY V+G+ ++ WE +D E C + A+ V Sbjct: 1 MSGGVDSSVAALLLTEQGYDVQGVTLQVWEPEDDNAAVTKKWEERGCC---KVGLARHVA 57 Query: 63 DKLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGAD 122 +LGI V+ + NV + F+A Y G TPNP + CN+ +KF E A+D G D Sbjct: 58 GRLGIPHEVVDTRETFRKNVIDDFVAGYLGGTTPNPCVRCNEWVKFGGLYE-LAKDRGID 116 Query: 123 YIATGHYVRRADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQVRKIA 182 ++ATGHY R VD L RG D KDQSYFLY L + LFPVG L+K +V A Sbjct: 117 FVATGHYARVVPVDEGVGLFRGADGKKDQSYFLYRLPAAWLPHILFPVGHLQKTEVWARA 176 Query: 183 EDLGLVTAKKKDSTGICFIGERKFREFLGRYLPA--QPGKIITVDGDEIGEHQGLMYHTL 240 E+L L + K+S ICF+ + +R FL P +PG + +G +IGEH+G+ ++T Sbjct: 177 EELDLPADEMKESQEICFVTQGDYRTFLTEEAPQALRPGPFLDPEGRKIGEHRGIAFYTP 236 Query: 241 GQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLHWVDREPF 300 GQRKGLGI E YV + + E N +V+ + + L Q ++W+ Sbjct: 237 GQRKGLGIARG-----ERLYVKEVNPETNAVVLGRAED---LSRQTCTVQDVNWLADTLP 288 Query: 301 TGTMRCTVKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTPGQSAVFYNGEVCLGGGII 360 +K RY + V+ + + F EP A++PGQS V Y + LGGGII Sbjct: 289 ETLDHVAIKYRYASPAVSGQVQPHTAGTLSIEFKEPQQALSPGQSLVLYQADRVLGGGII 348 Query: 361 E 361 + Sbjct: 349 Q 349 >UniRef50_B0DQ81 Predicted protein n=4 Tax=Basidiomycota RepID=B0DQ81_LACBS Length = 370 Score = 383 bits (983), Expect = e-105, Method: Composition-based stats. Identities = 140/374 (37%), Positives = 202/374 (54%), Gaps = 28/374 (7%) Query: 12 MSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEE---YCTAAADLADAQAVCDKLGIE 68 MSGGVDSSV+A+LL QQ Y + +FM+NW+ D C D D Q VC KL + Sbjct: 1 MSGGVDSSVAAFLLAQQDYDLSAVFMRNWDTGDESGTDKGCEWEKDWEDVQRVCKKLDLP 60 Query: 69 LHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAE---DLGADYIA 125 ++ + EYW+ VFE L ++++G TPN D+ CN+EIKF A LE +IA Sbjct: 61 CQMIDLSQEYWNRVFEPSLKQWESGVTPNTDVWCNREIKFGALLERLPAPTTSNKKPWIA 120 Query: 126 TGHYVRRADVDG--------KSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQ 177 TGHY R++ + +LLR D KDQ+Y+L ++S E ++++LFP+G L+K + Sbjct: 121 TGHYARKSWSTTPNSPHTRPRPKLLRPSDRGKDQTYYLSSISEEGLSRALFPIGHLQKSE 180 Query: 178 VRKIAEDLGLVTAKKKDSTGICFIGER-KFREFLGRYLPAQPGKIITV-DGDEIGEHQGL 235 VR++A L TA++ DS GICF+GE+ KF FL Y+P PG ++ G + +H GL Sbjct: 181 VRELARKHQLHTAERPDSVGICFVGEKAKFSNFLSSYIPPNPGPVVDQVSGKTLMQHAGL 240 Query: 236 MYHTLGQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLHWV 295 TLG+ + G +E +V KD +N + V G +H L S L W+ Sbjct: 241 WTFTLGENARI------PGMKERMFVSSKDQLSNTIYVVPGSDHEDLYSNTLRVSDFTWI 294 Query: 296 DREPF------TGTMRCTVKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTPGQSAVFY 349 + R + RYR +P TV+ + + V DEP AVTPGQ A Y Sbjct: 295 WNDAIPPDLSTPQGFRVDLMHRYRMHSVPSTVRKAETGDLIVTADEPEKAVTPGQIAALY 354 Query: 350 NGEVCLGGGIIEQR 363 +G+ CLG G+I+ Sbjct: 355 DGDWCLGCGVIKST 368 >UniRef50_B9CP36 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase n=1 Tax=Atopobium rimae ATCC 49626 RepID=B9CP36_9ACTN Length = 389 Score = 383 bits (983), Expect = e-105, Method: Composition-based stats. Identities = 147/386 (38%), Positives = 203/386 (52%), Gaps = 31/386 (8%) Query: 1 MSETAKKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYCTAAADLADAQA 60 M + KV +GMSGGVDS++SA LL +QG+ V ++M+NW +D +C A DLADA+ Sbjct: 1 METSMDKVYLGMSGGVDSALSAALLLEQGFDVHAVYMRNWSKDLPGFHCPWADDLADAER 60 Query: 61 VCDKLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLG 120 V LGI+L + EY + V + L Y G TPNPD++CN+ +KF F + A + G Sbjct: 61 VAVSLGIDLAVWDCEKEYKETVVDYLLDSYAHGYTPNPDVMCNQTVKFGTFAKRAFSE-G 119 Query: 121 ADYIATGHYVRR----------------------ADVDGKSRLLRGLDSNKDQSYFLYTL 158 ADYIATGHY R G S L+R D +KDQ+YFL+ + Sbjct: 120 ADYIATGHYARLASGEKNACGGDDANNTTGMAGAMHGSGTSCLMRAADEHKDQTYFLWRV 179 Query: 159 SHEQIAQSLFPVGEL-EKPQVRKIAEDLGLVTAKKKDSTGICFIGERKFREFLGRYLPAQ 217 E +++FP+G++ K +VR + D GL K DS GICFIG R FL + Sbjct: 180 PSEIFDRTIFPIGDIPTKAEVRAMCADRGLGIENKPDSDGICFIGPVGLRTFLLDAFERK 239 Query: 218 PGKIITVD-GDEIGEHQGLMYHTLGQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQG 276 G II + G ++GEH G T+GQRKGL +GG YVV D N + V Sbjct: 240 TGDIIEWESGKKLGEHDGAFLFTIGQRKGLSVGGGP-----AHYVVATDTNTNTVYVTSD 294 Query: 277 HEHPRLMSVGLIAQQLHWVDREPFTGTMRCTVKTRYRQTDIPCTVKALDDDRIEVIFDEP 336 L + + HW+ TV+TR+ PC + + + + ++ P Sbjct: 295 PLSAALWTKTMDIVDTHWISGCVPADGA-YTVRTRHTGELRPCMLTKVSATTMRITYEVP 353 Query: 337 VAAVTPGQSAVFYNGEVCLGGGIIEQ 362 V V PGQSAVFY+G VC+GGGIIE+ Sbjct: 354 VRTVAPGQSAVFYDGLVCIGGGIIER 379 >UniRef50_Q3Z8D8 tRNA-specific 2-thiouridylase mnmA n=5 Tax=Dehalococcoides RepID=MNMA_DEHE1 Length = 357 Score = 381 bits (980), Expect = e-104, Method: Composition-based stats. Identities = 130/364 (35%), Positives = 197/364 (54%), Gaps = 10/364 (2%) Query: 1 MSETAKKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYCTAAADLADAQA 60 M++T++ ++V MSGGVDSSV+A LL +QGY V G+ ++ ++ + A+ Sbjct: 1 MNDTSELIMVAMSGGVDSSVAAMLLLEQGYDVAGVSLQLKSNNEPYGNGYNLKLINRARE 60 Query: 61 VCDKLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLG 120 V LGI + V+ + + V F +Y GRTPNP I CN +K A LE + Sbjct: 61 VAAALGIPHYVVDLSDIFSQRVIADFCQQYSQGRTPNPCIRCNYYVKIGALLEKIPD-FN 119 Query: 121 ADYIATGHYVRRADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQVRK 180 A Y+ATGHY R + + LL+G D KDQSYFLYTL E +++ +FP+G+ K + + Sbjct: 120 AGYLATGHYARVLSDENGTHLLKGADEKKDQSYFLYTLPPESLSRLIFPLGKRYKKDIIR 179 Query: 181 IAEDLGLVTAKKKDSTGICFIGERKFREFLGRYLPAQPGKIITVDGDEIGEHQGLMYHTL 240 +A+ + L ++K +S +CFI + ++ FL + PGKI+ G +GEHQGL +T+ Sbjct: 180 LADKMKLPVSQK-ESQDVCFIPDGDYKSFLATRMGFTPGKILDKTGKILGEHQGLPLYTI 238 Query: 241 GQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLHWVDREPF 300 GQR+GLG+ + E +V D + E N ++VA H +L + ++ W + Sbjct: 239 GQRQGLGL-----ASNEKLFVSDMNPEANTIMVAS---HDQLYTSRILLSNFIWRESRIP 290 Query: 301 TGTMRCTVKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTPGQSAVFYNGEVCLGGGII 360 T VK RY+ + D + PV A TPGQ+AV Y G++ LGGGII Sbjct: 291 LDTPGMIVKVRYKAAPAEVKKISQTGDFYLLELASPVWAATPGQAAVIYLGDMVLGGGII 350 Query: 361 EQRL 364 E Sbjct: 351 EHGG 354 >UniRef50_D1BMF0 tRNA(5-methylaminomethyl-2-thiouridylate)-methyl transferase n=3 Tax=Veillonella RepID=D1BMF0_VEIPT Length = 353 Score = 381 bits (979), Expect = e-104, Method: Composition-based stats. Identities = 138/360 (38%), Positives = 210/360 (58%), Gaps = 16/360 (4%) Query: 8 VIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYCTAAADLADAQAVCDKLGI 67 + V MSGGVDSS++A +L +QGY+V G+ + W G Y + DA+ +CD LGI Sbjct: 5 IAVAMSGGVDSSLTAAMLLKQGYKVFGITL--WLWVSGTPYDEVPLAVTDAKKMCDFLGI 62 Query: 68 ELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGADYIATG 127 E H ++ +++NV + F+ EY GRTPNP + CNK IKF L A +LGA ++ TG Sbjct: 63 EHHVIDARDVFYENVVDYFVKEYAYGRTPNPCVFCNKNIKFDLMLNRAL-ELGATHMVTG 121 Query: 128 HYVRR--ADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQVRKIAEDL 185 HY + + G L +G+D KDQSY +Y ++ ++ +FP+G K + RK+A + Sbjct: 122 HYAQVNYNEETGLYELHKGVDPTKDQSYVMYNMNQRILSHLMFPLGGQCKTETRKLAAEY 181 Query: 186 GLVTAKKKDSTGICFIGERKFREFLGRYLPAQP--GKIITVDGDEIGEHQGLMYHTLGQR 243 L AKK DS ICF+ +++ + + +P G I+T DG+ +G+H GL +T+GQR Sbjct: 182 DLPVAKKPDSVDICFLPHGNYQKLVVEEMKGKPESGNIVTEDGEVLGKHNGLFNYTIGQR 241 Query: 244 KGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLHWVDREPFTGT 303 KGLGI + P YV+ + + N ++V + RL + +I + +++D + Sbjct: 242 KGLGI-----AYKHPLYVIGFNGDRNEVIVGP---NERLFTNRMICKFYNFLD-DTIHKE 292 Query: 304 MRCTVKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTPGQSAVFYNGEVCLGGGIIEQR 363 ++ K RY PCT + LDDD +EVIF+EP A+TPGQS FYNG LGG +I++ Sbjct: 293 LKAEGKIRYAANPSPCTARILDDDTMEVIFEEPQRAITPGQSVAFYNGTQLLGGAVIDRV 352 >UniRef50_A0LEL7 tRNA-specific 2-thiouridylase mnmA n=1 Tax=Syntrophobacter fumaroxidans MPOB RepID=MNMA_SYNFM Length = 362 Score = 381 bits (979), Expect = e-104, Method: Composition-based stats. Identities = 135/371 (36%), Positives = 194/371 (52%), Gaps = 19/371 (5%) Query: 2 SETAKKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYCTAAADLADAQAV 61 E + +V V MSGGVDS +A LL++QG V G+ M++ +C A + Sbjct: 1 MERSLRVAVAMSGGVDSLRAAILLKEQGNDVFGVHMRHVPPSRTGRWCAGAMIREKEAFL 60 Query: 62 CD---KLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAED 118 C+ + G + V+ + +V E F+ Y G+TPNP I CN +KF +E A Sbjct: 61 CELGLRFGFPIAVVDLRDAFESHVIEPFMEAYLLGQTPNPCIFCNPAVKFGFLMEKA-RA 119 Query: 119 LGADYIATGHYVRRAD---VDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEK 175 LGA+ ATGHY R + + RLLRG D +KDQSYFLY LS +Q+A +LFP+G K Sbjct: 120 LGAERFATGHYARVSPPGPTSRRFRLLRGSDLSKDQSYFLYGLSQDQLASTLFPLGSTRK 179 Query: 176 PQVRKIAEDLGLVTAKKKDSTGICFIGERKFREFLGRYLP----AQPGKIITVDGDEIGE 231 V A LG+ + +S ICF+ K+ EFL L G I+ ++G E+G Sbjct: 180 RDVSAWAGQLGIASLFPGESQEICFVPAGKYHEFLTERLDTLHAPAEGPILDLEGRELGR 239 Query: 232 HQGLMYHTLGQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQ 291 H+G+ +T+GQR+GLGI + P YVV + N + V + + L L + Sbjct: 240 HKGIFAYTIGQRRGLGI-----ASSAPLYVVGLEPAANAVRVGRVGD---LDRDRLEVGR 291 Query: 292 LHWVDREPFTGTMRCTVKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTPGQSAVFYNG 351 ++WV +RC V+ R + V + + V F+ P AVTPGQSAVFY+G Sbjct: 292 VNWVSIPAPNVPVRCRVRIRNQHAPAAAVVTPVGERSASVRFEAPQRAVTPGQSAVFYDG 351 Query: 352 EVCLGGGIIEQ 362 +V LGGG I + Sbjct: 352 DVVLGGGTISK 362 >UniRef50_B8P9F0 Predicted protein n=1 Tax=Postia placenta Mad-698-R RepID=B8P9F0_POSPM Length = 356 Score = 381 bits (978), Expect = e-104, Method: Composition-based stats. Identities = 138/364 (37%), Positives = 196/364 (53%), Gaps = 23/364 (6%) Query: 12 MSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEE---YCTAAADLADAQAVCDKLGIE 68 MSGGVDSSV A LL +Q Y + +FM+NW+ D C D D Q VC L I Sbjct: 1 MSGGVDSSVVAKLLAEQDYDLSAVFMRNWDTRDESGTDKGCEWEKDWEDVQRVCKMLDIP 60 Query: 69 LHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGAD-YIATG 127 V+ + +YW VFE L ++ G+TPNPDI CN+E+KF A ++ G D ++ATG Sbjct: 61 CEMVDLSQQYWTRVFEPSLQLWEKGQTPNPDIWCNREVKFGALMDQL---TGDDVWVATG 117 Query: 128 HYVRRADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQVRKIAEDLGL 187 HY ++ KS L R D KDQ+Y+L + +A+++FP+ K +VR +A+ L Sbjct: 118 HYADKSWFPCKS-LRRPRDRTKDQTYYLSAIPEASLARTIFPLAPFAKTEVRAMAKKWEL 176 Query: 188 VTAKKKDSTGICFIGE-RKFREFLGRYLPAQPGKIITVD-GDEIGEHQGLMYHTLGQRKG 245 TA++ +S GICF+GE R+F FL +Y+ + G II + G ++G H GL +T+GQ Sbjct: 177 PTAQRAESMGICFVGEKRRFDGFLSQYITPRQGPIIDLQTGKQLGTHTGLWTYTIGQNAR 236 Query: 246 LGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLHWVDREPFTGTMR 305 L G E +V KD E N + V HP L S LIA W+ R+ G + Sbjct: 237 L------PGMPERMFVAKKDAERNEIYVVPSSTHPALYSRSLIASAWQWIWRDHPPGGID 290 Query: 306 CT------VKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTPGQSAVFYNGEVCLGGGI 359 V+ R+R D P T++ I + F+EP +V PGQ A ++G+ CLG GI Sbjct: 291 DELGFHGRVQYRHRMLDAPATIQRRGH-TIHITFEEPQQSVAPGQIAAVWDGDWCLGSGI 349 Query: 360 IEQR 363 I Sbjct: 350 ITGT 353 >UniRef50_B1AJ41 tRNA-specific 2-thiouridylase mnmA n=13 Tax=Mollicutes RepID=MNMA_UREP2 Length = 385 Score = 381 bits (978), Expect = e-104, Method: Composition-based stats. Identities = 174/366 (47%), Positives = 229/366 (62%), Gaps = 19/366 (5%) Query: 11 GMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEE----------DDGEEYCTAAADLADAQA 60 G+SGGVDSSVSA LL+Q+GY+V GLFM NW+ + + C + D DAQA Sbjct: 12 GLSGGVDSSVSALLLKQEGYEVIGLFMSNWDTIANFENNHEFNKTHQGCESELDYQDAQA 71 Query: 61 VCDKLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLG 120 V K+GI L+ V F EYWDNVFE FL+EY+ RTPNPDILCN+ IKF +FL +A +L Sbjct: 72 VAQKIGIPLYRVEFIKEYWDNVFEYFLSEYQKNRTPNPDILCNQFIKFDSFLNYAKNELQ 131 Query: 121 ADYIATGHYVRRADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQVRK 180 ADYIA GHY R S LL+ +D+NKDQ+YFL L+ Q+ LFP+G L K QVR Sbjct: 132 ADYIAMGHYARVKHDRNSSFLLKAIDTNKDQTYFLCNLNQNQLQNVLFPIGHLTKLQVRA 191 Query: 181 IAEDLGLVTAKKKDSTGICFIGERKFREFLGRYLPAQPG-KIITVDGDEIGEHQGLMYHT 239 IA+ GL+TA KKDSTGICFIGER F+ FL Y+P QPG I V+ IG H G MY+T Sbjct: 192 IAKKHGLITANKKDSTGICFIGERNFKTFLQNYIPNQPGQIINIVNNQIIGHHIGTMYYT 251 Query: 240 LGQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGH-EHPRLMSVGLIAQQLHWVDRE 298 +GQRKGL +G G E +V DKD++ I+ VA E L+S + + ++++ E Sbjct: 252 IGQRKGLNLG----GMNERMFVCDKDIDKKIIYVAPSSFEKQYLISTQALIENINFI--E 305 Query: 299 PFTGTMRCTVKTRYRQTDIPCT-VKALDDDRIEVIFDEPVAAVTPGQSAVFYNGEVCLGG 357 P+ + V+ R+RQ I + + + +I E A+TPGQ AVFY + C+GG Sbjct: 306 PYNPQIPIMVRFRHRQDLIIVNDFLPIKNTKNVLINYESARAITPGQYAVFYQNDHCIGG 365 Query: 358 GIIEQR 363 GI+ + Sbjct: 366 GIVSKT 371 >UniRef50_C9RAV2 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase n=1 Tax=Ammonifex degensii KC4 RepID=C9RAV2_AMMDK Length = 344 Score = 380 bits (977), Expect = e-104, Method: Composition-based stats. Identities = 126/358 (35%), Positives = 187/358 (52%), Gaps = 27/358 (7%) Query: 7 KVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYCTAAADLADAQAVCDKLG 66 +V V +SGGVDS+ +A+LL Q GY+V G+ M + A V KL Sbjct: 3 RVAVALSGGVDSATAAFLLLQAGYEVFGVTMLV-----------TGEEGEKAAEVAAKLK 51 Query: 67 IELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGADYIAT 126 I + E+ V + F+ Y AG TPNP + CN+++KF LE A LGAD++AT Sbjct: 52 IPHFVFDLRQEFAQEVIKPFVEAYLAGLTPNPCVWCNRKLKFGLLLEKAL-KLGADFLAT 110 Query: 127 GHYVRRADVDGKSR--LLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQVRKIAED 184 GHY R + R L RG D KDQSYFLY+L+ +Q+A+ LFP+G K + + + Sbjct: 111 GHYARVWFDPARERYLLARGKDRRKDQSYFLYSLNQQQLARVLFPLGGRTKAENLLLVKK 170 Query: 185 LGLVTAKKKDSTGICFIGERKFREFLG--RYLPAQPGKIITVDGDEIGEHQGLMYHTLGQ 242 LGL + +S +CF+ +RE + +PG I+ G +IG H+GL ++T+GQ Sbjct: 171 LGLPLRE--ESQDVCFLKGGDYRELIKAMAQEKVKPGPILDPQGKKIGTHRGLAFYTIGQ 228 Query: 243 RKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLHWVDREPFTG 302 R+GLG +P+YV+ D N L+V L + ++++ E G Sbjct: 229 RRGLG-----HAWGKPYYVLALDPRRNALIVGPEE---MLYRPSCRVEGINFILFERPPG 280 Query: 303 TMRCTVKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTPGQSAVFYNGEVCLGGGII 360 V+ RY +P T+ + + + V F P AVTPGQ+AVFY ++ +GGG I Sbjct: 281 PFTAAVQVRYTSPAVPATLFP-EGEAVRVEFASPQRAVTPGQAAVFYQEDLVVGGGTI 337 >UniRef50_UPI000197B781 hypothetical protein BACCOPRO_02286 n=1 Tax=Bacteroides coprophilus DSM 18228 RepID=UPI000197B781 Length = 361 Score = 378 bits (970), Expect = e-103, Method: Composition-based stats. Identities = 138/363 (38%), Positives = 209/363 (57%), Gaps = 19/363 (5%) Query: 2 SETAKKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYCTAAADLADAQAV 61 E KV++GMSGG DSSV+A LLQ GY+V G+ + +E+D EY L DA+ + Sbjct: 10 MEKNNKVLLGMSGGTDSSVAAMLLQDAGYEVTGITFRFYEKDFQTEY------LEDARHL 63 Query: 62 CDKLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGA 121 C++LGI T + + + + F+ EY GRTP P LCN ++K+ L+ A+ G Sbjct: 64 CEQLGIRHLTYDAREVFEEQIIHYFIQEYMNGRTPVPCTLCNNQLKWP-LLKEIADREGI 122 Query: 122 DYIATGHYVRRADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQVRKI 181 ++ATGHYVR+ V+G+ + G D +KDQS+FL+ L + + ++LFP+GEL K +VR+I Sbjct: 123 YHLATGHYVRKQTVNGRWFIRSGADPDKDQSFFLWGLPQDLLERALFPMGELTKVRVREI 182 Query: 182 AEDLG-LVTAKKKDSTGICFIGERKFREFLGRYLPA---QPGKIITVDGDEIGEHQGLMY 237 A + G L A+K+DS G+CF +R FL ++P PG+ + +G ++G+H+G + Sbjct: 183 AAERGQLKAARKRDSLGVCFCP-MDYRTFLKSHVPEGQISPGEFLDEEGRKLGQHEGYPF 241 Query: 238 HTLGQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLHWVDR 297 +T+GQR+GLGI K +V + E N ++V L ++ + +D Sbjct: 242 YTIGQRRGLGIWLNKT-----LFVKETLPEQNRVIVCD--NLRALEKQEMLLTDWNLIDP 294 Query: 298 EPFTGTMRCTVKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTPGQSAVFYNGEVCLGG 357 E VK RYR+ CTV D + V EP+A+V PGQ+AVFY ++ LGG Sbjct: 295 ETALNHPDVIVKIRYRKQANRCTVTCTGDGCLHVNLHEPLASVAPGQAAVFYRDDLVLGG 354 Query: 358 GII 360 GII Sbjct: 355 GII 357 >UniRef50_B3RIL6 Putative uncharacterized protein n=1 Tax=Trichoplax adhaerens RepID=B3RIL6_TRIAD Length = 369 Score = 377 bits (969), Expect = e-103, Method: Composition-based stats. Identities = 139/372 (37%), Positives = 208/372 (55%), Gaps = 13/372 (3%) Query: 1 MSETAKKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYCTAAADLADAQA 60 MS + + + V MSGGVDS+++A+LL++QG++V G+FMKNW+ + C D+ D Sbjct: 1 MSSSRQVIAVAMSGGVDSTIAAYLLRKQGHEVVGIFMKNWDITEETGICKTDEDMQDFIK 60 Query: 61 VCDKLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLG 120 C+ LGI VNF +YW +VF F+ YK G TPNPDI CN+ IKF ++ +E+LG Sbjct: 61 SCNHLGIPHKEVNFVQDYWHHVFSPFVNGYKQGITPNPDITCNRMIKFNKLRQYCSENLG 120 Query: 121 ADYIATGHYVRRADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQVRK 180 D +ATGHY + D K +L++ +D KDQ+YFL + + +FP+G L K +V+ Sbjct: 121 VDNLATGHYA-QLVTDSKPKLIQAVDEAKDQTYFLANVKKISLKNIMFPIGNLLKSEVKN 179 Query: 181 IAEDLGL-VTAKKKDSTGICFIGERKFREFLGRYLPAQPGKIITVDGDEIGEHQGLMYHT 239 +A +GL A KK+S G+CFIG+R F+ F+ Y+ Q + T+DG G+H L T Sbjct: 180 LALKIGLRKIATKKESMGVCFIGKRNFKTFISEYIENQEYDVNTIDGQNFGKHSNLSLST 239 Query: 240 LGQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLHWVD--- 296 +G+R +G G E WYVV KD ++ +A G HP L +W+ Sbjct: 240 IGERARIG------GMSERWYVVSKDSNRKVITLAPGINHPALYCRIFYVADANWISYCA 293 Query: 297 --REPFTGTMRCTVKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTPGQSAVFYNGEVC 354 + + C ++ R+ +PC +K + +EV + + AVTPGQ A FY+ C Sbjct: 294 EMQLSLRKELECHIRIRHLAPLVPCLIKLQYNGFLEVNSQQSLFAVTPGQFAAFYSRNEC 353 Query: 355 LGGGIIEQRLPL 366 LGGG I + Sbjct: 354 LGGGQIVSSHTM 365 >UniRef50_D2QHY9 tRNA(5-methylaminomethyl-2-thiouridylate)-methyl transferase n=1 Tax=Spirosoma linguale DSM 74 RepID=D2QHY9_9SPHI Length = 391 Score = 377 bits (969), Expect = e-103, Method: Composition-based stats. Identities = 125/374 (33%), Positives = 200/374 (53%), Gaps = 22/374 (5%) Query: 2 SETAKKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEE-----YCTAAADLA 56 +++V MSGG+DSS++A +L ++GY+V G+ MK W+ C + + Sbjct: 1 MSKHGRILVAMSGGIDSSLAAVMLHEEGYEVIGMTMKTWDYASSGGTKKETGCCSLDSIN 60 Query: 57 DAQAVCDKLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAA 116 DA+ + LG + ++ E+ D V + F EY GRTPNP ++CN IK+ A L A Sbjct: 61 DARNIAVSLGFPHYILDIREEFGDAVIDHFTGEYLEGRTPNPCVMCNTHIKWDALLRRA- 119 Query: 117 EDLGADYIATGHYVRRADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKP 176 + L + IATGHY + +G+ L +G+D+ KDQSY L+ +S E ++++ P+G L K Sbjct: 120 DRLDCESIATGHYAHIREDNGRFVLSKGVDTLKDQSYVLWGVSQESLSRTKLPLGHLRKS 179 Query: 177 QVRKIAEDLGL-VTAKKKDSTGICFIGERKFREFLGRYLPAQP-----GKIITV-DGDEI 229 ++R +A + G K +S ICF+ + +R FL R +P G + G + Sbjct: 180 EIRDMATERGFMELVTKSESYEICFVPDNDYRGFLKRRMPGLEAEVAGGNFVMEGTGKVL 239 Query: 230 GEHQGLMYHTLGQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIA 289 G+HQG ++T+GQRKGLG+ +P +V + + N +V+ + L G+I Sbjct: 240 GKHQGYPFYTIGQRKGLGM-----AFGQPMFVTEIRKDTNEVVLGVDKD---LYRDGMIV 291 Query: 290 QQLHWVDREPFTGTMRCTVKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTPGQSAVFY 349 +L+ G M K RY+ T+ D+IEV+F E V+A+ PGQ+AVFY Sbjct: 292 SKLNLQKYPTLNGPMETVTKVRYKDPGTAATISQSG-DKIEVLFKEGVSAIAPGQAAVFY 350 Query: 350 NGEVCLGGGIIEQR 363 G+ +GGG I + Sbjct: 351 EGDDVIGGGWIMKS 364 >UniRef50_UPI00016C4B95 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase n=1 Tax=Gemmata obscuriglobus UQM 2246 RepID=UPI00016C4B95 Length = 357 Score = 376 bits (966), Expect = e-103, Method: Composition-based stats. Identities = 149/366 (40%), Positives = 212/366 (57%), Gaps = 26/366 (7%) Query: 7 KVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNW--------EEDDGEEYCTAAADLADA 58 +V++ MSGGVDSS SA LL++QG++V GLFM+ E D ++ C +A D DA Sbjct: 3 RVVLAMSGGVDSSASAVLLKKQGHEVIGLFMRTGTHGHDQPDERRDNKKGCCSAIDAGDA 62 Query: 59 QAVCDKLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAED 118 + V DKL I + ++F +E+ + + + F EY GRTPNP ++CN +KF + Sbjct: 63 RRVADKLDIPFYALDFESEF-NRIIDYFADEYVRGRTPNPCVVCNNWLKFGQL-WTFGQK 120 Query: 119 LGADYIATGHYVRRADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQV 178 LGAD+IATGHY + + L +G+D++KDQSY L+ + E + LFPVG KPQ+ Sbjct: 121 LGADFIATGHYAQVRNG----ELHKGVDADKDQSYVLHGIKREVLPHLLFPVGGYTKPQI 176 Query: 179 RKIAEDLGLV-TAKKKDSTGICFIGERKFREFLGRYLP--AQPGKIITVDGDEIGEHQGL 235 R+ A + LV A+K DS ICF+ + + P A G I DG +G+H G+ Sbjct: 177 RQFAREASLVGVAEKPDSVEICFVPSGNHTDVVRARRPGAATAGVIAERDGTVLGDHDGI 236 Query: 236 MYHTLGQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLHWV 295 +T+GQRKGL IGG K+ +V++ E N +VV + L+S GL+A ++W+ Sbjct: 237 DRYTIGQRKGLNIGGGKKR-----FVLELLAETNTVVVGDESD---LLSSGLVASGMNWL 288 Query: 296 DREPFTGTMRCTVKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTPGQSAVFYNGEVCL 355 +P T + C K RYR +P TV AL D EV+FD P AVTPGQ+ Y+G L Sbjct: 289 -IDPPTEPLTCVAKIRYRHAGVPATVTALPDGGAEVVFDAPQPAVTPGQALALYDGTRVL 347 Query: 356 GGGIIE 361 GGG IE Sbjct: 348 GGGWIE 353 >UniRef50_B1ZZ32 tRNA-specific 2-thiouridylase mnmA n=3 Tax=Verrucomicrobia RepID=MNMA_OPITP Length = 378 Score = 376 bits (966), Expect = e-103, Method: Composition-based stats. Identities = 156/376 (41%), Positives = 206/376 (54%), Gaps = 26/376 (6%) Query: 6 KKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDG-EEYCTAAADLADAQAVCDK 64 +K++V MSGGVDSSV+A LL+QQGY V G +MKNW +D +C D+ DA+ V + Sbjct: 5 EKILVAMSGGVDSSVAALLLKQQGYDVVGAYMKNWINEDQVIGHCPWQQDIEDARRVATQ 64 Query: 65 LGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGADYI 124 +GIE VN EY + V L Y G TPNPDI+CN+E+KF F A+D G I Sbjct: 65 IGIEFRVVNLMREYRERVVAYLLDGYARGLTPNPDIMCNREVKFGVF-RSWAKDHGFAAI 123 Query: 125 ATGHYVR-------------------RADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQ 165 ATGHY + LL G D NKDQSYFL LS EQ+ Sbjct: 124 ATGHYAQRVEVKPDLVTPAVLGGLNADGTPASTFALLEGADKNKDQSYFLALLSQEQLRD 183 Query: 166 SLFPVGELEKPQVRKIAEDLGLVTAKKKDSTGICFIGERKFREFLGRYLPAQPGKIIT-V 224 + FP+G L KP++R+IA + GL TA KKDS GICFIGE K ++FL Y+P PG I+ Sbjct: 184 ARFPIGHLPKPELRRIAREAGLATADKKDSQGICFIGEVKMQDFLRAYVPDAPGPIVRAT 243 Query: 225 DGDEIGEHQGLMYHTLGQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGH-EHPRLM 283 DG E+G+H+GL ++TLGQRKG+GI + E + VV K + L+VA H + P L Sbjct: 244 DGRELGQHRGLHFYTLGQRKGIGIPSNTD--HEAYVVVGKRAADRALLVAFDHPDAPGLF 301 Query: 284 SVGLIAQQLHWVDREPFTGTMRCTVKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTPG 343 + L W+ +P T + RYR +P + + F P + G Sbjct: 302 QREVRVHALSWI-GKPVTTARALEGRVRYRDPRVPLEFVPESETTALIRFAAPQRGLAAG 360 Query: 344 QSAVFYNGEVCLGGGI 359 Q FY+GE LGGG+ Sbjct: 361 QILAFYDGERLLGGGV 376 >UniRef50_Q4SDW3 Chromosome undetermined SCAF14629, whole genome shotgun sequence. (Fragment) n=2 Tax=Tetraodontidae RepID=Q4SDW3_TETNG Length = 387 Score = 376 bits (965), Expect = e-103, Method: Composition-based stats. Identities = 151/392 (38%), Positives = 198/392 (50%), Gaps = 56/392 (14%) Query: 6 KKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYCTAAADLADAQAVCDKL 65 + V+ MSGGVDSSV+A LL+++GY V G+FMKNW+ D C A D DA VC L Sbjct: 5 RHVVCAMSGGVDSSVAALLLKRRGYNVTGVFMKNWDLLDERGVCAAEKDCEDAYRVCQIL 64 Query: 66 GIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGADYIA 125 I H V++ EYW VF L EY+ GRTPNPDILCNK IKF F + A L A Sbjct: 65 DIPFHQVSYVKEYWHKVFSDLLNEYEKGRTPNPDILCNKHIKFNHFYKHAINTLSA---- 120 Query: 126 TGHYVRRADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQVRKIAEDL 185 RL +G D KDQ++FL +S E + Q++FP+ L K V+KIA + Sbjct: 121 --------------RLYKGADHLKDQTFFLSQISQEALRQTIFPLAGLTKSFVKKIAAEA 166 Query: 186 GL-VTAKKKDSTGICFIGERKFREFLGRYLPAQPGKIIT-VDGDEIGEHQ---------- 233 G K+K+S GICFIGER F F+ YL +PG ++ DG G H+ Sbjct: 167 GFHHVLKRKESMGICFIGERNFENFILEYLEPKPGNFVSVEDGTVKGAHKGRRVLCVSSD 226 Query: 234 ---------------GLMYHTLGQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHE 278 G TLGQR +G G ++ W+VVDKD+ ++VA Sbjct: 227 SCVFTFTHAFVCVPPGWFTLTLGQRARIG------GQKDAWFVVDKDIATGDVLVAPTTN 280 Query: 279 HPRLMSVGLIAQQLHWVDREPF-----TGTMRCTVKTRYRQTDIPCTVKALDDDRIEVIF 333 HP L + + HW+ +P T M C + ++ PCTV D + + Sbjct: 281 HPALYRDTVRTARFHWIAGDPPVELARTQMMECHFRFIHQMPLTPCTVTLNLDGSVWISL 340 Query: 334 DEPVAAVTPGQSAVFYNGEVCLGGGIIEQRLP 365 PV A+TPGQ AV Y G+ CLG G I Q P Sbjct: 341 SHPVRALTPGQYAVLYKGDECLGSGKIIQLGP 372 >UniRef50_C1A7G2 tRNA-specific 2-thiouridylase MnmA n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1A7G2_GEMAT Length = 381 Score = 375 bits (963), Expect = e-102, Method: Composition-based stats. Identities = 137/371 (36%), Positives = 204/371 (54%), Gaps = 17/371 (4%) Query: 1 MSETAKKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEE--DDGEEYCTAAADLADA 58 + +V+V MSGGVDSSV+A +L + G V G+ MK + D + C + +DA Sbjct: 4 LPPKGARVLVAMSGGVDSSVAAAILMEHGCDVVGVTMKLHGDGADVPDRPCCSLDATSDA 63 Query: 59 QAVCDKLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAED 118 + VC+KLGI + N + +V + F+ EY GRTP P + CN KF+ L A + Sbjct: 64 RRVCEKLGIPHYVTNLVDHFSHDVLDDFVQEYARGRTPIPCVRCNTFTKFRDLLHKA-DA 122 Query: 119 LGADYIATGHYVRRADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQV 178 + A ++ATGHY R G++ ++RGLD++KDQSYFL+ + + + + P+G K + Sbjct: 123 IDAPWLATGHYARIGHRHGQAVMVRGLDTSKDQSYFLWGIDRPVLDRLVLPIGAQTKAET 182 Query: 179 RKIAEDLGLVTAKKKDSTGICFIGERKFREFLGRYLPA-----QPGKIITVDGDEIGEHQ 233 R IA GL TA+K +S ICF+ + + +L A QPG + G+ IGEHQ Sbjct: 183 RDIARRFGLRTAEKIESQDICFVPDGDHVRVIAEHLGADAPALQPGPLRLASGEIIGEHQ 242 Query: 234 GLMYHTLGQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLH 293 G T+GQRKGL G EP +VV+ +VV L+ G+ A++L+ Sbjct: 243 GFARFTIGQRKGL-----PGGFAEPMFVVEIVPSERAVVVGPRE---ALLGRGVEARELN 294 Query: 294 WVDREPFTGTMRCTVKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTPGQSAVFYNGEV 353 W+ P G + V+ R R P T+ +D IE+ DE V A++PGQS V ++G+V Sbjct: 295 WLAEAPPVG-AQVQVQVRNRARPSPATIVRVDPQGIELALDEAVQAISPGQSLVVFDGDV 353 Query: 354 CLGGGIIEQRL 364 LGGGIIE+ + Sbjct: 354 VLGGGIIERGM 364 >UniRef50_C5CIB3 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase n=1 Tax=Kosmotoga olearia TBF 19.5.1 RepID=C5CIB3_KOSOT Length = 359 Score = 375 bits (962), Expect = e-102, Method: Composition-based stats. Identities = 127/367 (34%), Positives = 202/367 (55%), Gaps = 19/367 (5%) Query: 7 KVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEE------DDGEEYCTAAADLADAQA 60 K+ V +SGGVDS+V+A +L+ +G+ V G MKN + + ++ C + +D D Sbjct: 4 KIGVALSGGVDSAVAAAILKAEGHDVVGYHMKNLPDTLFELVPEKKKVCCSPSDTIDTHK 63 Query: 61 VCDKLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLG 120 + KLGIEL V + + + F+ EY+AG+TPNP + CN +KF A +E A D G Sbjct: 64 IAAKLGIELRIVKLNDIFRKEIIDYFIREYQAGKTPNPCVRCNDLMKFGALMEKAFGD-G 122 Query: 121 ADYIATGHYVRRADVDG-KSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQVR 179 + A+GHY R + L RG+ KDQ+YFL + ++ +FP G + K ++R Sbjct: 123 MEKFASGHYARIVEHPKYGLSLARGVAKYKDQAYFLSRIKRRKLPYIIFPNGNMTKEEIR 182 Query: 180 KIAEDLGLVTAKKKDSTGICFIGERKFREFLGRY-LPAQPGKIITVDGDEIGEHQGLMYH 238 IA +LGL KK+S +CFI + +R FL + +PG+I+ ++G+ +G H+GL ++ Sbjct: 183 DIARELGLPVHSKKESQELCFIPDNDYRRFLLEEGIEIKPGEIVDLEGNVLGRHKGLAFY 242 Query: 239 TLGQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLHWVDRE 298 T+GQR+GLGI +++ YVV D + N +VV +M A + +W+ + Sbjct: 243 TVGQRRGLGI-----VSDKKLYVVALDADKNRVVVGPKE---AVMRKKFRAIEPNWLA-D 293 Query: 299 PFTGTMRCTVKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTPGQSAVFYNGEVCLGGG 358 +RC + R T++ + +EV FD+P A+TPGQ AVFY+G + LG Sbjct: 294 LDEKELRCQCQIRSNMKAQGATIRIFS-NIVEVEFDKPALAITPGQLAVFYDGNIVLGSA 352 Query: 359 IIEQRLP 365 IE + Sbjct: 353 FIENVVS 359 >UniRef50_Q4A7U1 tRNA-specific 2-thiouridylase mnmA n=5 Tax=Mollicutes RepID=MNMA_MYCH7 Length = 372 Score = 375 bits (962), Expect = e-102, Method: Composition-based stats. Identities = 157/366 (42%), Positives = 221/366 (60%), Gaps = 22/366 (6%) Query: 7 KVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEE-----------DDGEEYCTAAADL 55 K++VG+SGGVDS+VSA+LL++ G+ V +FM+NW+ + C D Sbjct: 3 KIVVGLSGGVDSAVSAYLLKKAGHNVIAVFMRNWDSSLNNDFLGKKNEKNFTICPQEQDW 62 Query: 56 ADAQAVCDKLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFA 115 DA+ V +L I + ++F EYWD VF + +Y++G TPNPDILCNK IKFK FL++A Sbjct: 63 LDAKVVAKQLNIPIFRIDFIKEYWDEVFSDLILKYQSGLTPNPDILCNKNIKFKHFLDYA 122 Query: 116 AEDLGADYIATGHYVRRADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEK 175 + AD+IA GHY L G DS KDQSYFL LS Q+ +++FP+G L K Sbjct: 123 QKVHNADFIAMGHYA----KTDNGNLYAGADSLKDQSYFLGQLSKSQLQKTIFPLGNLLK 178 Query: 176 PQVRKIAEDLGLVTAKKKDSTGICFIGERKFREFLGRYLPAQPGKIITVDG-DEIGEHQG 234 +VRKIA +LGL+ AKKKDSTGICFIGERKF +FL Y+PAQPG II + +G+H G Sbjct: 179 SEVRKIANELGLINAKKKDSTGICFIGERKFTDFLQNYIPAQPGNIIDISTKKVLGKHIG 238 Query: 235 LMYHTLGQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLHW 294 +MY T+GQRKG G+ G +EP++VV +++ IL V+ E L S L+A+ ++ Sbjct: 239 IMYFTIGQRKGFGL----SGMKEPYFVVGHNLKEKILYVSPQSEKKWLESDSLMAKNANF 294 Query: 295 VDREPFTGTMRCTVKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTPGQSAVFYNGEVC 354 + F + K RYRQ IP ++ + D+ + + + A+TPGQ V Y+ Sbjct: 295 LSEN-FRNLDNLSAKFRYRQEAIPIRIEKIQDNSFWISY-QKYQAITPGQQVVIYHQNQV 352 Query: 355 LGGGII 360 + G I Sbjct: 353 ILAGEI 358 >UniRef50_Q73PV6 tRNA-specific 2-thiouridylase mnmA n=2 Tax=Treponema RepID=MNMA_TREDE Length = 366 Score = 375 bits (962), Expect = e-102, Method: Composition-based stats. Identities = 143/358 (39%), Positives = 201/358 (56%), Gaps = 22/358 (6%) Query: 7 KVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYCTAAADLADAQAVCDKLG 66 KV+VG+SGGVDS+V+A LL QGY V G+ M+ + G Y D+ DA+ V DKLG Sbjct: 2 KVLVGLSGGVDSAVAAKLLIDQGYDVTGVTMQLLPKLSGI-YKEQTDDIEDAKKVADKLG 60 Query: 67 IELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGADYIAT 126 I+ + + + + F+ EYK GRTPNP +CN +IKF FLE A +D G D IAT Sbjct: 61 IKHIVYDMRETFKTEIIDYFVEEYKQGRTPNPCFICNSKIKFGLFLEQALKD-GFDKIAT 119 Query: 127 GHYVRRADV----DGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQVRKIA 182 GHY + D + L + D+ KDQSYFL L+ EQ+++S+FP+G+ K +VR IA Sbjct: 120 GHYAKIEKTEIEGDERFLLRQAEDAQKDQSYFLALLTQEQLSRSIFPLGDFTKEKVRSIA 179 Query: 183 EDLGLVTAKKKDSTGICFIGERKFREFLGRYLP--AQPGKIITVDGDEIGEHQGLMYHTL 240 ED GL+ A + DS ICF+ + + + + GK I G+EIG H+GL Y+T+ Sbjct: 180 EDAGLINAHRPDSQDICFVPDDDYTRVINALAAGSFKEGKFIDTMGNEIGRHKGLQYYTI 239 Query: 241 GQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLHWVDREPF 300 GQR+GL I P YVV KD + N + V + E L + LIA +++ + ++ Sbjct: 240 GQRRGLAI-----AMGYPVYVVKKDAKTNTVTVGKDEE---LFAESLIASRVNIILKKTI 291 Query: 301 TGTMRCTVKTRYRQTDIPCTVKAL------DDDRIEVIFDEPVAAVTPGQSAVFYNGE 352 + VKTRYRQ + L + +V F EP AV GQ+AVFY G+ Sbjct: 292 DKEIDIEVKTRYRQQKKKAKLIPLKNEEFKPTGKFKVEFIEPEKAVAEGQAAVFYTGD 349 >UniRef50_C5MCB7 Putative uncharacterized protein n=1 Tax=Candida tropicalis MYA-3404 RepID=C5MCB7_CANTT Length = 426 Score = 374 bits (961), Expect = e-102, Method: Composition-based stats. Identities = 134/367 (36%), Positives = 202/367 (55%), Gaps = 14/367 (3%) Query: 6 KKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYCTAAADLADAQAVCDKL 65 +IV MS GVDSSV A L Q V G++M NW ++ D D Q VC L Sbjct: 66 DHIIVAMSSGVDSSVCAALFQN-YKNVHGIYMANWSQNAT----CTERDWRDVQKVCQDL 120 Query: 66 GIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGAD--Y 123 I+ VNF EYW++VF + +Y+ G TPNPDI CNK +KF E+ + + Sbjct: 121 NIDCERVNFEHEYWNDVFLPMIEKYERGLTPNPDIGCNKYVKFGKLAEYLEQKYHGKKWW 180 Query: 124 IATGHYVRRADV--DGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQVRKI 181 + TGHY R G+ LLRGL S KDQSY+L ++ +++++ P+G KP++R++ Sbjct: 181 LVTGHYARVMKHNATGEYHLLRGLSSRKDQSYYLSSIPASILSKTILPIGHYTKPEIREL 240 Query: 182 AEDLGLVTAKKKDSTGICFIG--ERKFREFLGRYLPAQPGKIITVDGDEIGEHQGLMYHT 239 A+ L TA K DS G+CF+ + FR+FL Y+PA PG I+T DG G+H+GL + T Sbjct: 241 AKKFNLHTASKPDSQGLCFVNPNQSNFRDFLNEYIPANPGDIVTEDGTVWGKHKGLWHAT 300 Query: 240 LGQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLHWVDREP 299 +GQR + + + W+V +K++E N LV+ +G ++P+L + L W+ + Sbjct: 301 IGQRSTVSMPQGDPKYQGVWFVSEKNIEKNQLVIVKGTDNPKLFKQVVEITDLEWIQPKE 360 Query: 300 FTGTMRCTVKTRYRQ--TDIPCTVKALDDDRIEVIFDEPVAAVTPGQSAVFYNGEVCLGG 357 M V+ +Y T +P V D++ + ++P A+ PGQ + YNG LGG Sbjct: 361 KVLAMD-NVQFQYHSLTTPVPVKVIKNKGDKLIIELEKPARALAPGQGGILYNGNQVLGG 419 Query: 358 GIIEQRL 364 G+I + L Sbjct: 420 GMINKTL 426 >UniRef50_B2UPK4 tRNA-specific 2-thiouridylase mnmA n=1 Tax=Akkermansia muciniphila ATCC BAA-835 RepID=MNMA_AKKM8 Length = 357 Score = 374 bits (961), Expect = e-102, Method: Composition-based stats. Identities = 147/346 (42%), Positives = 206/346 (59%), Gaps = 8/346 (2%) Query: 7 KVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEY-CTAAADLADAQAVCDKL 65 +++VG+SGGVDSSV+A LL +QG+ V G +MKNW D+G C D+ DA AV Sbjct: 3 RILVGLSGGVDSSVAAALLVEQGHDVVGAYMKNWVNDEGIPGECPWEQDIQDALAVAKTT 62 Query: 66 GIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGADYIA 125 GIE ++ EY + + Y+AG TPNPD+LCN+E+KF FL++A E G DY+A Sbjct: 63 GIEFRVIDLVDEYRARIVNYLIEGYRAGYTPNPDVLCNREMKFGVFLDYALEQ-GFDYVA 121 Query: 126 TGHYVRRADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQVRKIAEDL 185 TGHY RR D + +LRG D NKDQSYFL + +QIA+++FP+G+L KP+VR +AE Sbjct: 122 TGHYARRMDTPQGAFILRGRDPNKDQSYFLSLMRPDQIARAVFPLGDLLKPEVRVLAEKY 181 Query: 186 GLVTAKKKDSTGICFIGERKFREFLGRYLPAQPGKIITVDGDEIGEHQGLMYHTLGQRKG 245 GL TA+KKDS GICFIG+ K +FL YLP +PG I+ +G +G H GL T+GQRKG Sbjct: 182 GLPTARKKDSQGICFIGQVKMSDFLRHYLPDKPGNIVDTEGRTLGTHNGLHLFTMGQRKG 241 Query: 246 LGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPR-LMSVGLIAQQLHWVDREPFTGTM 304 G+ +EG + VV KDV N L++ R L + + + Sbjct: 242 HGVASPREGV--AYVVVGKDVRRNRLILGYEDASTRGLYASRAVVGG---ISNTLAPLPA 296 Query: 305 RCTVKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTPGQSAVFYN 350 R + RYR + + L++ ++ + FD P+ A+ GQ FY+ Sbjct: 297 RVMAQPRYRAKAEWASCEYLEEGKVRLGFDTPLRALAVGQVCAFYD 342 >UniRef50_Q9W5B6 Mitochondrial tRNA-specific 2-thiouridylase 1 n=7 Tax=Sophophora RepID=MTU1_DROME Length = 389 Score = 373 bits (959), Expect = e-102, Method: Composition-based stats. Identities = 143/365 (39%), Positives = 217/365 (59%), Gaps = 21/365 (5%) Query: 17 DSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYCTAAADLADAQAVCDKLGIELHTVNFAA 76 DS+VSA LL +QG++V G+FM+NW+E D C+ ADL DA+ C +LG+EL VN+ Sbjct: 14 DSAVSAHLLAEQGFKVLGVFMRNWDEADEVGRCSGEADLKDAEWACRQLGVELRQVNYVR 73 Query: 77 EYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGADYIATGHYVR----- 131 EYW VF FL +Y+ G TPNPDILCN+ IKF F + A E+LG D +ATGHY R Sbjct: 74 EYWTAVFSQFLDDYQMGLTPNPDILCNRHIKFDLFHKHALENLGYDAVATGHYARNSLGN 133 Query: 132 ---RADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQVRKIAEDLGL- 187 + +RLL D+ KDQ++FL +S + + +++FP+G+ +K QV+ +A+ +G Sbjct: 134 YLEGIASNNDARLLIPADTFKDQTFFLAGISRKALQRTMFPLGDFQKSQVKDLAKKIGFQ 193 Query: 188 VTAKKKDSTGICFIGERKFREFLGRYLPAQPGKIITVD-GDEIGEHQGLMYHTLGQRKGL 246 AKKK+STGICF+G+R F++F+ Y+ ++ G + +D G +G H+G+ T+GQR L Sbjct: 194 RLAKKKESTGICFVGKRNFKDFIQEYITSKRGPFLDIDSGAVVGHHEGIHQWTVGQRCRL 253 Query: 247 GIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLHWVDREPF-----T 301 +P++V K+ +N + VA GH HP L+S + +W+ + T Sbjct: 254 SSFL------QPYFVARKEAASNTIYVASGHNHPALLSTHIAVDPPNWLCSKSQQILSDT 307 Query: 302 GTMRCTVKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTPGQSAVFYNGEVCLGGGIIE 361 G++RC + ++ + + C + + V D P+ A+TPGQ AVFY+ CLG I Sbjct: 308 GSLRCRFRFQHTKPLVDCQLSISPSNTFLVELDAPLRAITPGQYAVFYDDTACLGSARIL 367 Query: 362 QRLPL 366 PL Sbjct: 368 SANPL 372 >UniRef50_Q057R1 tRNA-specific 2-thiouridylase mnmA n=6 Tax=Enterobacteriaceae RepID=MNMA_BUCCC Length = 373 Score = 373 bits (959), Expect = e-102, Method: Composition-based stats. Identities = 182/361 (50%), Positives = 243/361 (67%), Gaps = 4/361 (1%) Query: 11 GMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYCTAAADLADAQAVCDKLGIELH 70 MSGGVDSSVSAWLL +QGYQVEGLFMKNW+EDD +YC++ D D + VC L I LH Sbjct: 13 AMSGGVDSSVSAWLLLKQGYQVEGLFMKNWDEDDSNDYCSSKIDFNDVKKVCKTLNIPLH 72 Query: 71 TVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGADYIATGHYV 130 T+NF+ EYW+NVF FL E+K G TPNPDILCNK IKF L+F+ + L +DY ATGHY Sbjct: 73 TINFSEEYWENVFLNFLKEHKKGNTPNPDILCNKIIKFNICLKFSLKYLKSDYFATGHYA 132 Query: 131 RRADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQVRKIAEDLGLVTA 190 + L R D KDQSYFLYTL + +++ +FP+ +K ++RKIA+ + L Sbjct: 133 KIKKTKKNFYLYRAHDKKKDQSYFLYTLKSKILSKIIFPLAYFKKKKIRKIAKKIKLSVY 192 Query: 191 KKKDSTGICFIGERKFREFLGRYLPAQPGKIITVDGDEIGEHQGLMYHTLGQRKGLGIGG 250 KKKDSTGICFI +KF FL +Y+P + GKI+T+ + +G H G ++T+GQRKGL IGG Sbjct: 193 KKKDSTGICFIQPKKFNSFLKQYIPQKIGKILTMSKEFLGLHLGYEFYTIGQRKGLNIGG 252 Query: 251 TKEGTEE-PWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLHWVDREPFTGTMRCTVK 309 K+ PWYVV KD+ NI+ V QG +P L+S G + +++H+++ F +C V+ Sbjct: 253 KKKKKNAYPWYVVKKDIYLNIIFVVQGLRNPYLLSYGFLTKKIHYINDNIFYFKKKCVVQ 312 Query: 310 TRYRQTDIPCTVKALD--DDRIEVIFDEPVAAVTPGQSAVFYNGEVCLGGGIIEQRLP-L 366 +YRQ I C + ++ I+VIF +P+ VTPGQSAVFY CLGG II++ +P L Sbjct: 313 IKYRQEPIICEFFKISKKNNYIKVIFKKPILYVTPGQSAVFYLKNKCLGGSIIKKNIPYL 372 Query: 367 P 367 P Sbjct: 373 P 373 >UniRef50_Q1J090 tRNA-specific 2-thiouridylase mnmA n=5 Tax=Deinococci RepID=MNMA_DEIGD Length = 381 Score = 372 bits (956), Expect = e-102, Method: Composition-based stats. Identities = 144/372 (38%), Positives = 216/372 (58%), Gaps = 16/372 (4%) Query: 3 ETAKKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEED---DGEEYCTAAADLADAQ 59 + +++V+ MSGGVDSSV+A LL+ GYQV G M+ W +D D + C + +A+ Sbjct: 6 KASQRVLCAMSGGVDSSVTAALLKDAGYQVIGAMMRFWPDDKRVDTFDTCCSPDAAYEAR 65 Query: 60 AVCDKLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDL 119 V +++G+ + +++ ++ ++ FL+EY GRTPNP + CN ++KF ++ A + L Sbjct: 66 RVAEQVGVPFYLLDYREQFQHHIVGPFLSEYAQGRTPNPCVNCNTKVKFDELVKKA-KML 124 Query: 120 GADYIATGHYV-RRADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQV 178 G Y+ATGHYV R DG RG D KDQ+YFL+ E + LFPVGELEKP+V Sbjct: 125 GCRYVATGHYVKRVEREDGSVEFHRGDDPRKDQTYFLWGTPREALPFILFPVGELEKPRV 184 Query: 179 RKIAEDLGLVTAKKKDSTGICFIGERKFREFLGRYLPAQPGKIITVD-GDEIGEHQGLMY 237 R+IA + GL+TA+K +S ICF+ K ++F+ +LP + G I + G+ +GEH G + Sbjct: 185 REIAAEKGLLTARKPESQNICFVP-GKVQDFVAEHLPQRQGLIREIRTGEVVGEHLGTQF 243 Query: 238 HTLGQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLHWVDR 297 +TLGQ+KGLG+ T +VV D E N + V ++ + GL A+ +++ Sbjct: 244 YTLGQKKGLGLYQ----THRVRHVVHLDPETNTVWVG---DYEDCLWTGLKAEGANYLL- 295 Query: 298 EPFTGTMRCTVKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTPGQSAVFYNGEVCLGG 357 + V+ RYR + TV D+ E+ F+EP AV PGQSAV Y G LGG Sbjct: 296 DLAELPREVEVQVRYRTKPVRATVLHADEHGFELQFEEPQFAVAPGQSAVLYAGTRLLGG 355 Query: 358 GII-EQRLPLPV 368 G+I + LPV Sbjct: 356 GLIADHARNLPV 367 >UniRef50_B5YGH6 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase n=1 Tax=Thermodesulfovibrio yellowstonii DSM 11347 RepID=B5YGH6_THEYD Length = 342 Score = 372 bits (956), Expect = e-102, Method: Composition-based stats. Identities = 133/360 (36%), Positives = 212/360 (58%), Gaps = 23/360 (6%) Query: 6 KKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYCTAAADLADAQAVCDKL 65 +KV++ MSGG+DSSV+A+LL+++G VEG+F ++E A++ A+ + L Sbjct: 2 EKVLLAMSGGIDSSVAAYLLREKGMAVEGVFFILFDE---------PANIELAKQTANFL 52 Query: 66 GIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGADYIA 125 I+LH + ++ +V F YK G TPNP ++CNK+IKF L+F AE + A+YIA Sbjct: 53 NIKLHIEDLREKFKADVITPFFEGYKKGITPNPCVICNKKIKFP-LLKFLAEKVKANYIA 111 Query: 126 TGHYVRRADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQVRKIAEDL 185 TGHY R ++ L++G+D KDQSYFLY + ++ +FP+GE K ++R+IAE + Sbjct: 112 TGHYARIVRINNIPLLMKGIDPKKDQSYFLYGIERTLLSHIIFPLGEYTKYKIREIAEKV 171 Query: 186 GLVTAKKKDSTGICFIGERKFREFLGRYLPAQPGKIITVD-GDEIGEHQGLMYHTLGQRK 244 G+ + ++ST +CF+ ++++ E + P + G II + G IG+H+G+ +T+GQRK Sbjct: 172 GIPSKVAEESTEVCFLRDKRYYESIR---PTKGGPIIEMSTGKIIGQHRGIHLYTIGQRK 228 Query: 245 GLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLHWVDREPFTGTM 304 LGI + P YVV + N + V + + +L+W+ + Sbjct: 229 RLGI-----ASPHPLYVVKIEPSENAVYVDSKEKA---FMREFVVNELNWLC-DIEKEEF 279 Query: 305 RCTVKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTPGQSAVFYNGEVCLGGGIIEQRL 364 C VK RY TV ++ DR V+F++P A TPGQSAVFYNG++ LGGG+I++ + Sbjct: 280 SCQVKIRYAMNPEKATVTLINKDRANVVFEKPQFAPTPGQSAVFYNGDIVLGGGVIKEIM 339 >UniRef50_Q0F280 TRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0F280_9PROT Length = 374 Score = 372 bits (956), Expect = e-101, Method: Composition-based stats. Identities = 140/367 (38%), Positives = 193/367 (52%), Gaps = 20/367 (5%) Query: 4 TAKKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWE----EDDGEEYCTAAADLADAQ 59 +VI MSGGVDSSV A LL++ G V G+F+ W+ E + C + D DA+ Sbjct: 20 KGVRVIAAMSGGVDSSVMAVLLKEAGVDVIGVFLNVWDYSRDEVNRHGSCCSLEDSYDAR 79 Query: 60 AVCDKLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDL 119 V D +GI + ++ E+ +V + F+ +Y+ GRTPNP CN+ +KF A LE AA+ L Sbjct: 80 RVADHIGIPFYAMDMRDEFRRDVIDPFIQDYETGRTPNPCERCNRFVKFGALLE-AADKL 138 Query: 120 GADYIATGHYVRRADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQVR 179 A Y+ATGHYVRR D + L +G D+ KDQSYFL T + Q + LFPVG LEK R Sbjct: 139 EAAYVATGHYVRRRDDNDGIHLFKGNDARKDQSYFLATTNRAQAERILFPVGGLEKDDTR 198 Query: 180 KIAEDLGLVTAKKKDSTGICFIGERKFREFLGR---YLPAQPGKIITVDGDEIGEHQGLM 236 ++A L TA K +S ICFI FL R + G I+ G +G HQG+ Sbjct: 199 RLAHFYKLPTADKHESQDICFIPAGDRIAFLKREGAEAGFREGDIVDTTGRILGRHQGIA 258 Query: 237 YHTLGQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLHWVD 296 ++TLGQRKGLG+ PW+VV D + VA + M G+ + W+ Sbjct: 259 HYTLGQRKGLGLPDG------PWHVVALDGATARVTVAHPEDA---MIGGVDVSEAVWIR 309 Query: 297 REPFTGTMRCTVKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTPGQSAVFYNGEVCLG 356 T K RY+ C ++ D+ + V F +P PGQ A FY G+ LG Sbjct: 310 E--PKSGEAVTAKVRYQMQPAACVLEHFDES-LRVTFAQPQKPSAPGQVAAFYAGDELLG 366 Query: 357 GGIIEQR 363 GGI+ + Sbjct: 367 GGIVSRV 373 >UniRef50_A6KZ28 tRNA-specific 2-thiouridylase mnmA 2 n=10 Tax=Bacteroides RepID=MNMA2_BACV8 Length = 351 Score = 372 bits (956), Expect = e-101, Method: Composition-based stats. Identities = 132/363 (36%), Positives = 202/363 (55%), Gaps = 20/363 (5%) Query: 2 SETAKKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYCTAAADLADAQAV 61 +E+ KV++GMSGG DSSV+A LLQ GY+V G+ + +E+++ EY L DA+A+ Sbjct: 4 TESNNKVLLGMSGGTDSSVAALLLQDAGYEVTGITFRFYEKENDTEY------LEDARAL 57 Query: 62 CDKLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGA 121 C++L I T + + + + F+ EY AG TP P LCN +K+ L+ ++++G Sbjct: 58 CERLNIPHLTYDVRDTFRKTIIDYFINEYMAGHTPVPCTLCNNYLKWP-LLKKISDEMGI 116 Query: 122 DYIATGHYVRRADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQVRKI 181 + ATGHYVRR ++G + G+D +KDQS+FL+ L E + + L P+G L K +VR+I Sbjct: 117 YHFATGHYVRRRFINGCYHITTGVDPDKDQSFFLWGLPQEILQRMLLPMGNLTKARVREI 176 Query: 182 AEDLG-LVTAKKKDSTGICFIGERKFREFLGRYLPAQ---PGKIITVDGDEIGEHQGLMY 237 A + G L A K+DS G+CF +R FL + LP PGK G+ I H+G + Sbjct: 177 AAERGFLKAAHKRDSLGVCFCP-MDYRTFLHKELPEGSILPGKFFDEMGNFIARHKGYPF 235 Query: 238 HTLGQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLHWVDR 297 +T+GQR+GLGI + +V + N +++ + L + ++ H + Sbjct: 236 YTIGQRRGLGIDLNR-----AVFVKEIIPAENKVIL---SDLKALEKTEMRLKEWHITNP 287 Query: 298 EPFTGTMRCTVKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTPGQSAVFYNGEVCLGG 357 VK RYR+ CTV D+ + V EP+ A+ PGQ+A FY +V LGG Sbjct: 288 ALLLNKDDIIVKIRYRKQANRCTVTLQPDNTLHVQLHEPLTAIAPGQAAAFYRDDVVLGG 347 Query: 358 GII 360 GII Sbjct: 348 GII 350 >UniRef50_A7HCV7 tRNA-specific 2-thiouridylase mnmA n=1 Tax=Anaeromyxobacter sp. Fw109-5 RepID=MNMA_ANADF Length = 349 Score = 370 bits (951), Expect = e-101, Method: Composition-based stats. Identities = 132/358 (36%), Positives = 184/358 (51%), Gaps = 15/358 (4%) Query: 7 KVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEY--CTAAADLADAQAVCDK 64 +V+V +SGGVDSS +A LL +G+ V G+ M+ + D C A DL DA+A + Sbjct: 2 RVLVALSGGVDSSTAAALLVAEGHDVIGVSMRVADYSDARRGRSCCAPDDLEDARAAARR 61 Query: 65 LGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGADYI 124 L I + N A + + V E F+ +Y GRTPNP + CN ++KF L A LGA + Sbjct: 62 LDIPFYVANVEARFRERVIEPFVRDYVEGRTPNPCVACNSDVKFDWLLARA-RALGA-KL 119 Query: 125 ATGHYVRRADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQVRKIAED 184 ATGHY R G+ L R D KDQ+YFLY L E + LFPVG+L K VR +A Sbjct: 120 ATGHYARVERRGGRFALCRAGDPAKDQTYFLYGLGQEALRDVLFPVGDLAKRDVRAVAAQ 179 Query: 185 LGLVTAKKKDSTGICFIGERKFREFLGRYLP--AQPGKIITVDGDEIGEHQGLMYHTLGQ 242 GL A+K +S ICF+ + +F+ P + G+I++ G+ +G H G+ T+GQ Sbjct: 180 AGLPNAEKAESQEICFVTQGDAGDFVALRAPGSVRAGEIVSTAGEVLGRHDGVHRFTVGQ 239 Query: 243 RKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLHWVDREPFTG 302 R+GLG+ G P YVV + +VV E ++ W+ P Sbjct: 240 RRGLGLAG-----PAPRYVVRLEPGTARVVVGSAGEAS---RDRFAVTEVRWIAGAPPPR 291 Query: 303 TMRCTVKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTPGQSAVFYNGEVCLGGGII 360 + VK R+R TV +V PV V PGQ+AVFY+G+ LGGG I Sbjct: 292 PVAARVKVRHRHEGEEGTVTPDGGGG-QVRLARPVRGVAPGQAAVFYDGDEVLGGGRI 348 >UniRef50_UPI000180C35A PREDICTED: similar to tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase 1 n=1 Tax=Ciona intestinalis RepID=UPI000180C35A Length = 437 Score = 370 bits (950), Expect = e-101, Method: Composition-based stats. Identities = 137/375 (36%), Positives = 207/375 (55%), Gaps = 22/375 (5%) Query: 7 KVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYCTAAADLADAQAVCDKLG 66 KVI +SGGVDS+V+A LL+++G V G+FM+NW+ +D C+ D A VC L Sbjct: 3 KVICAISGGVDSAVAALLLKRRGLNVVGVFMRNWDLEDEVGQCSVQEDATYATRVCRALD 62 Query: 67 IELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGADYIAT 126 I + VN EYW NVF + +Y+ G TPNPDILCN+ +KF AF + G IAT Sbjct: 63 IPFYEVNLVKEYWTNVFMPMVDQYEMGNTPNPDILCNQLVKFSAFHNKCSSMFGNVVIAT 122 Query: 127 GHYVRR----------ADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKP 176 GHY R + RLL+ +D KDQ++FL+ + + +S FP+G + K Sbjct: 123 GHYARTTLNDRVLTAKVPHTAEQRLLKAVDPFKDQTFFLHKVDRTALLRSYFPLGGIFKS 182 Query: 177 QVRKIAEDLGLV-TAKKKDSTGICFIGERKFREFLGRYLPAQPGKIITVD-GDEIGEHQG 234 +V++IA + K+K+S GICFIG R+F F+ Y+ +PG+ I + G+ IG H G Sbjct: 183 KVKEIAAASEISFVLKRKESAGICFIGRREFSNFIKNYISPKPGQFICYETGNVIGNHDG 242 Query: 235 LMYHTLGQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLHW 294 +T+GQR +G G + V+ ++ ++ ++V G HP L L++ HW Sbjct: 243 YFSYTVGQRSLIG------GLRISYAVLHRNSKDGNVLVVPGLNHPALYRKSLVSGPAHW 296 Query: 295 VDREPFT----GTMRCTVKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTPGQSAVFYN 350 + EP + C + +R + +PCTV L+++R+ +I P+ A+T GQ AV Y Sbjct: 297 IAGEPALLREGKPLNCYFRFCHRNSLVPCTVHQLENERLLIILQHPLRAMTVGQDAVLYT 356 Query: 351 GEVCLGGGIIEQRLP 365 + CLGG I+ P Sbjct: 357 EDECLGGAQIDDVGP 371 >UniRef50_Q9SYD2 F11M15.16 protein n=14 Tax=Magnoliophyta RepID=Q9SYD2_ARATH Length = 421 Score = 370 bits (950), Expect = e-101, Method: Composition-based stats. Identities = 133/373 (35%), Positives = 198/373 (53%), Gaps = 17/373 (4%) Query: 1 MSETAKKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEY---CTAAADLAD 57 M E +V V +SGGVDSSV+ LL G+ ++K W ++ E + C DL Sbjct: 1 MPEKPLRVAVLLSGGVDSSVALRLLHAAGHSCTAFYLKIWFQEGFENFWNQCPWEDDLKY 60 Query: 58 AQAVCDKLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAE 117 A+ VC+++ + L V+ EYW+ V + EY+ GRTPNPD+LCN IKF AF++ A Sbjct: 61 AKHVCEQVDVPLEVVHLTDEYWERVVSYIIEEYRCGRTPNPDVLCNTRIKFGAFMD-AIS 119 Query: 118 DLGADYIATGHYVRRAD-----VDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGE 172 D+ DY+ +GHY + D S L D KDQ+YFL LS Q+ + LFP+G Sbjct: 120 DMEYDYVGSGHYAKVVHPPADQNDASSVLELSQDMVKDQTYFLSHLSQTQLKRLLFPLGC 179 Query: 173 LEKPQVRKIAEDLGLVTAKKKDSTGICFIGERKFREFLGRYLPAQPGKIITVD-GDEIGE 231 ++K +VRK+A L +KDS GICF+G+ KF +F+ R++ G I+ + GD +G Sbjct: 180 VKKDEVRKLATQFDLPNKDRKDSQGICFLGKIKFSDFVCRHIGEMEGIILEAESGDFLGN 239 Query: 232 HQGLMYHTLGQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQ 291 H+G ++T+GQR+GL + G PWYVV+KD +NN++ V++ + Sbjct: 240 HRGFWFYTIGQRQGLRLPGG------PWYVVEKDTKNNVVFVSRNYYSIDKRRRIFRVGS 293 Query: 292 LHWVDREPFTGTMRCTVKTRYRQTDIPCTVKALDDDRIE-VIFDEPVAAVTPGQSAVFYN 350 L W +P K R+ C+ + D + V DE + GQ A FY Sbjct: 294 LRWNSGKPSGKVRELRCKVRHGPGFYSCSFEMEGDGDVAVVHLDEDDQGLAAGQFAAFYE 353 Query: 351 GEVCLGGGIIEQR 363 G C+G G+I + Sbjct: 354 GTTCIGSGVILES 366 >UniRef50_B0SG84 tRNA-specific 2-thiouridylase mnmA n=6 Tax=Leptospira RepID=MNMA_LEPBA Length = 380 Score = 369 bits (948), Expect = e-101, Method: Composition-based stats. Identities = 140/371 (37%), Positives = 212/371 (57%), Gaps = 21/371 (5%) Query: 2 SETAKKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWE-----EDDGEEYCTAAADLA 56 + +K+IV MSGGVDS+V+A LL + GY V G+ ++ WE D ++ C + D+ Sbjct: 1 MKEKEKIIVAMSGGVDSAVAAGLLMEAGYDVIGVNLRTWEYEAPACDTTKKSCCSPEDIR 60 Query: 57 DAQAVCDKLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAA 116 DA+ V L I + + + + V + F+++YK GRTPNP + CN +KF A E A Sbjct: 61 DARDVGLSLNIPFYVIKMEKVFGERVIDRFISDYKDGRTPNPCVECNTFVKFGALFEQA- 119 Query: 117 EDLGADYIATGHYVRRADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKP 176 + LG D IATGHY R +VDG+ + +D K+Q+Y+LY LS + I ++FP+GE++K Sbjct: 120 KKLGIDKIATGHYARVIEVDGRYAIRNAVDMKKNQTYYLYGLSQDNIKNTVFPLGEMDKS 179 Query: 177 QVRKIAEDLGLVTAKKKDSTGICFIGERKFREFLGRY-LPAQPGKIITVDGDEIGEHQGL 235 +VR+IA+ +GL A+K +S ICFI E +R FL + + PG G IG+HQG Sbjct: 180 EVREIAKRMGLPVAEKPESQEICFIPENDYRSFLKKKGMEFTPGFFKLASGQIIGKHQGK 239 Query: 236 MYHTLGQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLHWV 295 T+GQRKGLGI + P YV+ + ++ +V+ + E S + +++ + Sbjct: 240 EGFTIGQRKGLGI-----AWKNPLYVLSIE-DDGTVVLGEEEETV---SESFVLEEITYQ 290 Query: 296 DREPFT--GTMRCTVKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTPGQSAVFY--NG 351 P +M V+ RYR + C V +L + +V F E V +VTPGQSA FY NG Sbjct: 291 ALAPLALGQSMEMKVQIRYRSAPVHCKVTSLGE-TWKVNFLEDVKSVTPGQSATFYPTNG 349 Query: 352 EVCLGGGIIEQ 362 + GGII++ Sbjct: 350 DYLFAGGIIQK 360 >UniRef50_B2IBH3 tRNA-specific 2-thiouridylase mnmA n=141 Tax=root RepID=MNMA_BEII9 Length = 431 Score = 369 bits (948), Expect = e-101, Method: Composition-based stats. Identities = 136/371 (36%), Positives = 203/371 (54%), Gaps = 19/371 (5%) Query: 7 KVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDG---EEYCTAAADLADAQAVCD 63 +V+V MSGGVDSSV A LL+++GY+V G+ ++ ++ + + C A D+ DA+ V D Sbjct: 31 RVVVAMSGGVDSSVVAALLKREGYEVIGVTLQLYDHGEAVHRKGACCAGQDIQDARQVAD 90 Query: 64 KLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGADY 123 +LGI + +++ + V + F Y G TP P + CN EIKF E A + LGAD Sbjct: 91 QLGIPHYVLDYEERFRRKVIDPFAQSYATGETPIPCVSCNSEIKFADLFETA-QHLGADV 149 Query: 124 IATGHYVRRADV-DGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQVRKIA 182 +ATGHYV DG L R LDS++DQSYFL+ ++ Q+ FP+G+L KP VR++A Sbjct: 150 LATGHYVSSKAEADGGRALYRSLDSSRDQSYFLFATTNAQLELLRFPLGDLAKPDVRQMA 209 Query: 183 EDLGLVTAKKKDSTGICFIGERKFREFLGRYLPAQ--PGKIITVDGDEIGEHQGLMYHTL 240 LGLV A K DS ICF+ K+ + + R P PG+I+ VDG +G H G++++T+ Sbjct: 210 RQLGLVVADKADSQDICFVPSGKYSDVIERLSPGAVVPGEILHVDGRVLGRHSGVIHYTI 269 Query: 241 GQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLHWVDR--- 297 GQR+GLG+G G EP YV+ D ++V L + + + ++W+ Sbjct: 270 GQRRGLGLGAVGAGAGEPLYVIRLDAAKAQVIVGPR---QALATRRVHLRGVNWIGPGSL 326 Query: 298 -EPFTGTMRCTVKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTPGQSAVFYNGE---- 352 + + V+ R + IP + A + I V F V+PGQ+ VFY + Sbjct: 327 QDMDEHGLEIFVQVRSTRAPIPGFLHAHE-SEIWVDFALDEDGVSPGQACVFYENDQPRA 385 Query: 353 VCLGGGIIEQR 363 LGGG I Sbjct: 386 RVLGGGFISAT 396 >UniRef50_B9GF12 Predicted protein n=6 Tax=Viridiplantae RepID=B9GF12_POPTR Length = 434 Score = 368 bits (946), Expect = e-100, Method: Composition-based stats. Identities = 135/379 (35%), Positives = 204/379 (53%), Gaps = 23/379 (6%) Query: 1 MSETAK--KVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGE---EYCTAAADL 55 M++ K ++ V +SGGVDSSV+ LL G+ ++K W ++D C DL Sbjct: 1 MADKDKPLRIAVLLSGGVDSSVALRLLHAAGHHCTAFYLKIWFQEDFNNFWSECPWEEDL 60 Query: 56 ADAQAVCDKLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFA 115 A+ VCD++G+ L V+ EYW NV + EY+ GRTPNPD+LCN IKF AF++ A Sbjct: 61 KFAKGVCDQVGVPLEVVHLTDEYWSNVVSYIIEEYRCGRTPNPDVLCNTRIKFGAFMD-A 119 Query: 116 AEDLGADYIATGHYVRRAD-----VDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPV 170 ++ DY+A+GHY ++ S L D KDQ+YFL L+ Q+ + +FP+ Sbjct: 120 INNMEFDYVASGHYAHVIHPVSDQINKPSVLELSKDKLKDQTYFLSHLTQAQLKRLIFPL 179 Query: 171 GELEKPQVRKIAEDLGLVTAKKKDSTGICFIGERKFREFLGRYLPAQPGKIITVD-GDEI 229 G + K +VR +A L +KDS GICF+G+ KF EF+GR++ G I+ + GD + Sbjct: 180 GCIPKEEVRNLASKFDLPNKDRKDSQGICFLGKIKFSEFVGRHIGESEGVILEAETGDFL 239 Query: 230 GEHQGLMYHTLGQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIA 289 G H+G ++T+GQR+GL + G PWYVV+KDV+NN++ V++ + Sbjct: 240 GIHRGFWFYTIGQRQGLRLPGG------PWYVVEKDVKNNVVFVSRNYFSLDKRRRSFRV 293 Query: 290 QQLHWVDREPFTGTMRCTVKTRYRQTDIPCTVKA-----LDDDRIEVIFDEPVAAVTPGQ 344 L W+ P T + K R+ T C+VK ++ + V E + GQ Sbjct: 294 GSLKWLSGSPTDMTTQLQCKVRHGPTFYDCSVKIELGEDSPEEVVAVHLCEDDQGLAAGQ 353 Query: 345 SAVFYNGEVCLGGGIIEQR 363 FY G C+G G+I + Sbjct: 354 FTAFYQGRTCIGSGVILES 372 >UniRef50_Q6MLR7 tRNA-specific 2-thiouridylase mnmA n=1 Tax=Bdellovibrio bacteriovorus RepID=MNMA_BDEBA Length = 360 Score = 368 bits (946), Expect = e-100, Method: Composition-based stats. Identities = 134/370 (36%), Positives = 202/370 (54%), Gaps = 24/370 (6%) Query: 4 TAKKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEE-----DDGEEYCTAAADLADA 58 + +V+V MSGGVDSS +A LL +QGY+V G M+ W+ ++G C ++ D+ DA Sbjct: 2 SKGRVLVAMSGGVDSSAAAALLVEQGYEVIGATMQVWDYSTCDIEEGNGTCCSSIDVDDA 61 Query: 59 QAVCDKLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAED 118 +AV D+LGI + +N A++ V + FL Y G+TP P + CN +KF ++ + Sbjct: 62 RAVADRLGIPFYVINCEAKFRAAVIDPFLKAYLEGQTPLPCVNCNTYLKFDHLVKK-MRE 120 Query: 119 LGADYIATGHYVRRADVD-GKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQ 177 L DYIATGHY + D GK+ + D KDQ+YFL+T+ E + + LFPVG+++KPQ Sbjct: 121 LECDYIATGHYAKIVYDDKGKASIHTSTDDWKDQTYFLFTIDPELVPKLLFPVGDMKKPQ 180 Query: 178 VRKIAEDLGLVTAKKKDSTGICFIGERKFREFLGRY-----LPAQPGKIITV-DGDEIGE 231 VR+ +E GLVTA+KKDS GICF+G + ++ F+ + L ++ G I +G + Sbjct: 181 VREYSESRGLVTARKKDSQGICFVGNQGYQNFIKDHVKSEILASKKGLIKRFPEGQVMAS 240 Query: 232 HQGLMYHTLGQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQ 291 H+G+ +T GQ KGLG+ E +V+ D +N + V + L + + Sbjct: 241 HEGIHNYTYGQSKGLGM-----DYHEKLFVIKIDASDNTVWVGEEKH---LFANEVDVVD 292 Query: 292 LHWVDREPFTGTMRCTVKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTPGQSAVFYNG 351 + + VK RY+ P V ++ F EP AVTPGQ+AVFY Sbjct: 293 PKLL--DEIQDGEIMNVKIRYQHKGAPAQVIKTASG-FKLKFTEPQRAVTPGQAAVFYRD 349 Query: 352 EVCLGGGIIE 361 +GGG I Sbjct: 350 RQLVGGGWIT 359 >UniRef50_Q17440 Probable mitochondrial tRNA-specific 2-thiouridylase 1 n=2 Tax=Chromadorea RepID=MTU1_CAEEL Length = 375 Score = 368 bits (944), Expect = e-100, Method: Composition-based stats. Identities = 144/369 (39%), Positives = 215/369 (58%), Gaps = 18/369 (4%) Query: 7 KVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWE-EDDGEEYCTAAADLADAQAVCDKL 65 +V++GMSGGVDS+VSA+LL+++G+ V GL M NW+ +++G +C + D +DA+ VCD+L Sbjct: 3 RVVIGMSGGVDSAVSAFLLKKRGFDVIGLHMINWDVQEEGTSHCPRSKDESDARNVCDRL 62 Query: 66 GIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGADYIA 125 I HTVNF EYW++VF FL YK GRT PDI CN+ IKF F + A E AD+IA Sbjct: 63 NIPFHTVNFVKEYWNDVFLKFLENYKNGRTTVPDIDCNQSIKFDVFHKIAREKFNADFIA 122 Query: 126 TGHYV--------RRADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQ 177 TGHY + A + RL G D KDQ++FL T++ EQ+ +++FP+G L+K + Sbjct: 123 TGHYATTNFGDFQQNAKDSDEIRLFSGKDPLKDQTFFLCTVNQEQLKRAMFPLGSLQKSE 182 Query: 178 VRKIAEDLGL-VTAKKKDSTGICFIGERK-FREFLGRYLPAQPGKIITVDGDEIGEHQGL 235 V++IAE+ G AKK +S GICFIG++K F +FL Y+ +PG+I+ +G EIG H G+ Sbjct: 183 VKRIAEEQGFQEVAKKPESMGICFIGKKKRFSDFLDEYIEPKPGRILLKNGSEIGNHHGI 242 Query: 236 MYHTLGQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLHWV 295 T+G+R + + + ++V + ++ +G HP L + + W+ Sbjct: 243 HQFTIGKR--INGKYLEARSHLGFFVSHIHSDTGDIIACEGSHHPDLYASRFLINHPKWI 300 Query: 296 -DREPFT--GTMRCTVKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTPGQSAVFYN-G 351 +PF + + + IPC + + + VI + A PGQ VFYN Sbjct: 301 RTFDPFNRISSNNFLCRIQRTHPPIPCVAEKQEQ-FLSVIPRLALRATAPGQMCVFYNTK 359 Query: 352 EVCLGGGII 360 CLGGG I Sbjct: 360 NECLGGGEI 368 >UniRef50_A8X0Z8 Putative uncharacterized protein n=2 Tax=Caenorhabditis briggsae RepID=A8X0Z8_CAEBR Length = 393 Score = 367 bits (943), Expect = e-100, Method: Composition-based stats. Identities = 141/387 (36%), Positives = 208/387 (53%), Gaps = 34/387 (8%) Query: 7 KVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEE-----------------DDGEEYC 49 +V++GMSGGVDS+VSA+LL+Q+G+ V GL M ++G C Sbjct: 5 RVVIGMSGGVDSAVSAFLLKQKGFDVVGLHMVTHSRQRESEKKNISQINWDSQEEGSSTC 64 Query: 50 TAAADLADAQAVCDKLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFK 109 + D ADA+ VC++L I HTVNF EYW++VF FL YK GRT PDI CN IKF Sbjct: 65 PRSKDEADARNVCNRLNIPFHTVNFVKEYWNHVFLKFLENYKIGRTTVPDIDCNYSIKFD 124 Query: 110 AFLEFAAEDLGADYIATGHYV--------RRADVDGKSRLLRGLDSNKDQSYFLYTLSHE 161 AF + A E AD+IATGHY + RL G D KDQ++FL T++ E Sbjct: 125 AFHKVAQETFDADFIATGHYATTSFGDFQQNRKHSEAIRLFSGRDPLKDQTFFLCTVTQE 184 Query: 162 QIAQSLFPVGELEKPQVRKIAEDLGLV-TAKKKDSTGICFIGERK-FREFLGRYLPAQPG 219 Q+ +++FP+G L+K +V++IAE G KK +S GICFIG++K F +FL Y+ +PG Sbjct: 185 QLKRAMFPLGSLQKSEVKRIAEQQGFHRVVKKPESMGICFIGKKKRFSDFLDEYIEPKPG 244 Query: 220 KIITVDGDEIGEHQGLMYHTLGQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEH 279 +I+ DG +IG+H G+ T+G+R E + ++V + + +V G H Sbjct: 245 RIVLKDGKQIGKHHGIHQFTIGKRIHGKYLN--ERSHFGFFVSEIRSDTGDVVACNGSHH 302 Query: 280 PRLMSVGLIAQQLHWV-DREPFTG--TMRCTVKTRYRQTDIPCTVKALDDDRIEVIFDEP 336 L + + + +W+ +P + + + +PC V+ + + V P Sbjct: 303 SDLYATRFLINRPNWIPSSDPLEEISPSKILCRIQRTHPPVPCKVEKSEH-YLSVEPKIP 361 Query: 337 VAAVTPGQSAVFY-NGEVCLGGGIIEQ 362 + A +PGQ VFY CLGGG I + Sbjct: 362 LRATSPGQMCVFYTTENECLGGGEIFK 388 >UniRef50_Q5PBB1 tRNA-specific 2-thiouridylase mnmA n=21 Tax=cellular organisms RepID=MNMA_ANAMM Length = 387 Score = 366 bits (941), Expect = e-100, Method: Composition-based stats. Identities = 138/362 (38%), Positives = 198/362 (54%), Gaps = 15/362 (4%) Query: 8 VIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEED--DGEEYCTAAADLADAQAVCDKL 65 V+V MSGGVDSSV A LL ++GY+V G M+ G + C + D+ DA+ V L Sbjct: 31 VVVAMSGGVDSSVVAALLHERGYKVIGATMQLHSSSPASGAKSCCGSVDIYDAKRVASTL 90 Query: 66 GIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGADYIA 125 G + +++ + V + F+ YK G TP P + CN+ +KF+ L+ AA +G D +A Sbjct: 91 GFPHYVLDYEEVFRREVIDDFINSYKRGETPIPCVKCNQTVKFRDMLK-AARAIGGDVVA 149 Query: 126 TGHYVRRADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQVRKIAEDL 185 TGHYVRR ++ G+ ++LRG D KDQSYFL++++ EQ+ FP+G+L K VR +A+ L Sbjct: 150 TGHYVRRVEIAGEQQILRGKDPQKDQSYFLFSVTSEQLKFLRFPLGDLAKSNVRLLAQQL 209 Query: 186 GLVTAKKKDSTGICFIGERKFREFLGRYLPA--QPGKIITVDGDEIGEHQGLMYHTLGQR 243 L A K DS ICF+ E +RE L PA + GKI+ VDG +GEH G+ T+GQR Sbjct: 210 NLEVADKPDSQDICFVPENSYREVLRNLDPASVKKGKIVHVDGRLLGEHDGISNFTVGQR 269 Query: 244 KGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLHWV-DREPFTG 302 +GL I P YVV D N +VV LM L + L+W+ D Sbjct: 270 RGLNISAPY-----PLYVVRLDAAQNTVVVGPQS---ALMKRALFVKNLNWLPDYNIPKR 321 Query: 303 TMRCTVKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTPGQSAVFYNGEVCLGGGIIEQ 362 + + R + T+ + D V+ +E V+PGQ+ V Y+ E LGGG I Sbjct: 322 GLAVDARLRSSGATVRATITSDGDGYGTVVLEE-DCVVSPGQACVLYDKERLLGGGWIYN 380 Query: 363 RL 364 +L Sbjct: 381 KL 382 >UniRef50_Q7TTZ4 tRNA-specific 2-thiouridylase mnmA n=2 Tax=Planctomycetaceae RepID=MNMA_RHOBA Length = 399 Score = 366 bits (940), Expect = e-100, Method: Composition-based stats. Identities = 137/396 (34%), Positives = 215/396 (54%), Gaps = 48/396 (12%) Query: 7 KVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEED----------------------- 43 +V++ MSGGVDSSV+A LL + G++V G+FM++ E Sbjct: 3 RVVLAMSGGVDSSVAAHLLLRDGHEVIGVFMRHGEASAAACRIDSDEPQNTNPLNLPVLG 62 Query: 44 --------DGEEYCTAAADLADAQAVCDKLGIELHTVNFAAEYWDNVFELFLAEYKAGRT 95 D ++ C +A D ADA+ V +GI ++++ ++ + + F+ +Y A RT Sbjct: 63 DSAGGKRADHKQGCCSATDAADARRVAMSMGIPFYSLDLQEDFRK-IVDYFVDDYLAART 121 Query: 96 PNPDILCNKEIKFKAFLEFAAEDLGADYIATGHYVRRADVDGKSRLLRGLDSNKDQSYFL 155 PNP + CN IKF ++A + + A+++ATGHY R +G+S L RGLD +KDQSY L Sbjct: 122 PNPCVKCNHWIKFGRLFDYA-DGVDAEFVATGHYARMVHSNGRSELHRGLDGHKDQSYAL 180 Query: 156 YTLSHEQIAQSLFPVGELEKPQVRKIAEDLGLVTAKKKDSTGICFIGERKFREFLGRYLP 215 + + ++++ + PVG+ KP++R++A LGL + KKDS ICF+ + +F+ P Sbjct: 181 FGIDPARLSRMMLPVGDFTKPEIREMATSLGLGVSDKKDSQEICFVTQGHHSDFVKSRRP 240 Query: 216 A----QPGKIITVDGDEIGEHQGLMYHTLGQRKGLGIGGTKEGTEEPWYVVDKDVENNIL 271 G+I+T G +GEH+G T+GQRK LG+ EP +V+ + + + Sbjct: 241 EMVGATAGEIVTTGGKVVGEHKGFEAFTIGQRKRLGV-----AMGEPHFVIRIEPDTRRV 295 Query: 272 VVAQGHEHPRLMSVGLIAQQLHW-VDREPFTGTMRCTVKTRYRQTDIPCTVKAL--DDDR 328 V+ + E L+ GL+A Q +W V RE ++ RY P V D R Sbjct: 296 VIGRAEE---LLRPGLVADQCNWFVTREELADAQSVGIQIRYNGQPHPGHVVMDGSDPTR 352 Query: 329 IEVIFDEPVAAVTPGQSAVFYNGEVCLGGGIIEQRL 364 ++V+FD+P AAV PGQ+AV Y+GE LGGG I + Sbjct: 353 MKVMFDDPQAAVAPGQAAVVYDGERVLGGGWITHAI 388 >UniRef50_Q6BSZ3 DEHA2D04818p n=6 Tax=Saccharomycetales RepID=Q6BSZ3_DEBHA Length = 415 Score = 366 bits (939), Expect = e-99, Method: Composition-based stats. Identities = 127/375 (33%), Positives = 193/375 (51%), Gaps = 16/375 (4%) Query: 2 SETAKKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYCTAAADLADAQAV 61 ++IV MS GVDSSV A L ++ V G++M NW + +D D + + Sbjct: 44 PNANDEIIVAMSSGVDSSVCAALYAEKYKNVRGIYMANWSQTAK----CTESDWNDVKKI 99 Query: 62 CDKLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGA 121 C+ L I VNF EYW+ VF+ + Y+ G TPNPD+ CNK +KF +E + Sbjct: 100 CNDLNIPCERVNFEKEYWNEVFQPMVQMYEKGLTPNPDVGCNKYVKFGKMIEHLTKKFSN 159 Query: 122 D---YIATGHYVRRA--DVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKP 176 + ++ TGHY R + LLRG +KDQSY+L + ++Q L P+G L KP Sbjct: 160 NQKWWLVTGHYARIMKCQTSNEYNLLRGYYKSKDQSYYLANIPKRVLSQVLMPIGHLTKP 219 Query: 177 QVRKIAEDLGLVTAKKKDSTGICFIG--ERKFREFLGRYLPAQPGKIITVDGDEIGEHQG 234 VR++A+ L TAKK DS G+CF+ E FR FL Y+ PG IIT DG G+HQG Sbjct: 220 NVRELAKGYNLHTAKKPDSQGLCFVSQDENNFRNFLNEYIAPNPGNIITEDGKIWGQHQG 279 Query: 235 LMYHTLGQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLHW 294 L + T+GQ+ G+ + + W++ +K + N LV+ +G+ + RL GL ++ W Sbjct: 280 LWHATIGQKSGISMPQGDPRYKGIWFISEKRYDTNELVIVKGNNNDRLFKKGLKVKEWSW 339 Query: 295 VDREPFTGTMRCT-----VKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTPGQSAVFY 349 + + + +C V+ R Q + +++ + A+ PGQ+ V Y Sbjct: 340 LMDDISAISEKCEEGNLSVQYRSLQEPEIINSIKISQSDVDIELVKKARAMAPGQNIVLY 399 Query: 350 NGEVCLGGGIIEQRL 364 G LG GI+E+ Sbjct: 400 EGNRVLGSGILEETY 414 >UniRef50_A9A0S9 tRNA-specific 2-thiouridylase mnmA n=1 Tax=Desulfococcus oleovorans Hxd3 RepID=MNMA_DESOH Length = 358 Score = 365 bits (937), Expect = 2e-99, Method: Composition-based stats. Identities = 126/364 (34%), Positives = 183/364 (50%), Gaps = 20/364 (5%) Query: 1 MSETAKKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYCTAAADLADAQA 60 + + + V +SGG+DS V+A LL+Q G V + + Sbjct: 12 LESSNPLIAVLVSGGIDSLVAAHLLKQSGADVTAIHF--------LTGYEPEDRAGRLEK 63 Query: 61 VCDKLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLG 120 + ++ I + + + NV + F A Y G TPNP ++CN IKF A +++A LG Sbjct: 64 LFTQMDIPVFIFDCRTVFQSNVVDYFTAAYLRGETPNPCMVCNSRIKFGACMDYA-RSLG 122 Query: 121 ADYIATGHYVRRADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQVRK 180 AD +ATGHY R RL +G D K+QSYFL LS +Q+ ++ FP+ + K QVR Sbjct: 123 ADAVATGHYCRTTKDPDGVRLWKGADPAKEQSYFLAFLSQDQLGRARFPLERMTKDQVRA 182 Query: 181 IAEDLGLVTAKKKDSTGICFIGERKFREFLGRYLP--AQPGKIITVDGDEIGEHQGLMYH 238 A GLV + K+S +CFI + +F+ +P PG I + G IG H GL Sbjct: 183 HAARHGLVPIESKESQDVCFIRGEECADFIEAQVPAIPGPGPIEDMTGRLIGTHSGLHRF 242 Query: 239 TLGQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLHWVDRE 298 T+GQR+G+ E+P+YV D+ N L V + L Q++W+ + Sbjct: 243 TVGQRRGINCP-----AEQPYYVAALDMARNCLKVGFRQD---LFVPVCRVAQVNWI-PD 293 Query: 299 PFTGTMRCTVKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTPGQSAVFYNGEVCLGGG 358 G+M +VK RY QT++P + AL + V F P AV PGQ AVFY+G+ LGGG Sbjct: 294 RPKGSMNVSVKIRYNQTEVPARLTALGETDAVVEFVTPQFAVAPGQGAVFYDGDAVLGGG 353 Query: 359 IIEQ 362 II Sbjct: 354 IIRA 357 >UniRef50_C1ZEX9 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase n=3 Tax=Planctomycetaceae RepID=C1ZEX9_PLALI Length = 388 Score = 365 bits (937), Expect = 2e-99, Method: Composition-based stats. Identities = 144/384 (37%), Positives = 202/384 (52%), Gaps = 33/384 (8%) Query: 4 TAKKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEED------------------DG 45 + ++V++ MSGGVDSSV+A LLQQQGY+V GLFM++ E Sbjct: 2 SKERVVLAMSGGVDSSVAAVLLQQQGYEVIGLFMRSGEASASACSLPPSGLLPVIERKSH 61 Query: 46 EEYCTAAADLADAQAVCDKLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKE 105 ++ C +AAD ADAQ V D L I H +NF + D + F EY GRTPNP ++CN Sbjct: 62 KQGCCSAADAADAQRVADLLDIPFHALNFRDSF-DQIKSYFADEYLKGRTPNPCVMCNVW 120 Query: 106 IKFKAFLEFAAEDLGADYIATGHYVRR-ADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIA 164 +KF EFA + +GA IATGHY R D G++RL+RG D +KDQSY L+ + + ++ Sbjct: 121 LKFGRLWEFA-QQVGATRIATGHYARIIQDEFGQTRLMRGADLSKDQSYVLFGIRPDILS 179 Query: 165 QSLFPVGELEKPQVRKIAEDLGLVTAKKKDSTGICFIGERKFREFLGRYLP--AQPGKII 222 + LFPVG K ++R+IA L A K DS ICFI + +R FL RY G + Sbjct: 180 KILFPVGHQPKAEIREIAAQANLRVAGKPDSQEICFIPDNDYRGFLRRYRDVSDTSGNFV 239 Query: 223 TVDGDEIGEHQGLMYHTLGQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRL 282 G +G+H G T+GQR+GLGI EP +V+ D E+ + + E L Sbjct: 240 DPQGKILGQHSGFEQFTIGQRRGLGIALG-----EPRFVIKIDAESRNVTLGTAEE---L 291 Query: 283 MSVGLIAQQLHWVDREPFTGTMRCTVKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTP 342 S L+A + +W+ P + CT + R + D + + F EP + V P Sbjct: 292 GSSSLVAARTNWLS-APTSEVFSCTAQIRSMHRAAAAWAQVDADGTLHLRFCEPQSGVAP 350 Query: 343 GQSAVFYNG-EVCLGGGIIEQRLP 365 GQ+ V Y+ E + G IE P Sbjct: 351 GQAVVLYDSLERVICGAWIEDSQP 374 >UniRef50_B1GZY9 tRNA-specific 2-thiouridylase mnmA n=2 Tax=Elusimicrobia RepID=MNMA_UNCTG Length = 360 Score = 365 bits (937), Expect = 2e-99, Method: Composition-based stats. Identities = 132/371 (35%), Positives = 198/371 (53%), Gaps = 24/371 (6%) Query: 2 SETAKKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEE------YCTAAAD- 54 ET K+++G+SGGVDS+V+A+LL++QGY+V G M W+ C + Sbjct: 1 METEMKILIGLSGGVDSAVAAYLLKKQGYEVTGTTMSIWDNFLPAPKTKVNDSCLGPENE 60 Query: 55 -LADAQAVCDKLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLE 113 + A + D L I L+ + + EY V E F EYK GRTPNP I CN IKF Sbjct: 61 NIETAHKIADFLTIPLYVTDCSGEYKKVVLENFRNEYKEGRTPNPCIRCNAYIKFGILPA 120 Query: 114 FAAED-LGADYIATGHYVRR--ADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPV 170 + L D ATGHY +L + D NKDQ+YFLY L+ + +++++FP+ Sbjct: 121 AVKKTGLSFDKFATGHYANIGFDSSTNMYKLYKAADLNKDQTYFLYRLTQKTLSETIFPL 180 Query: 171 GELEKPQVRKIAEDLGLVTAKKKDSTGI-CFIGERKFREFLGRYLPAQPGKIITVDGDEI 229 G K QVR IA+ +GL +A+K DS C + + L PA PG I+ +G + Sbjct: 181 GIYTKEQVRNIAKKIGLPSAEKPDSQDFYC----GDYNDILQ--FPANPGNIVDKNGRVL 234 Query: 230 GEHQGLMYHTLGQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIA 289 G+H G+ +T+G+RKGLG+ G GT++P YV++ + N++ + + L S L A Sbjct: 235 GKHNGIWNYTIGKRKGLGLLG---GTKDPLYVINISAKQNMVTIGTKED---LYSSSLTA 288 Query: 290 QQLHWVDREPFTGTMRCTVKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTPGQSAVFY 349 +++ W P T+ T K R + + +D ++V F +P +VT GQS VFY Sbjct: 289 KKVSWCSILPPKKTIEATAKIRRQHKPEKAFIIPQEDSSVKVEFAQPQMSVTAGQSIVFY 348 Query: 350 NGEVCLGGGII 360 + LGGG+I Sbjct: 349 KDDTVLGGGVI 359 >UniRef50_A1BI85 tRNA-specific 2-thiouridylase mnmA n=2 Tax=Chlorobiaceae RepID=MNMA_CHLPD Length = 357 Score = 365 bits (936), Expect = 2e-99, Method: Composition-based stats. Identities = 143/372 (38%), Positives = 209/372 (56%), Gaps = 28/372 (7%) Query: 1 MSETAKKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYCTAA----ADLA 56 M+ET V+VG+SGGVDS+V+A LL +QGY+V GL ++ + D + +D A Sbjct: 1 MTET---VVVGISGGVDSAVAACLLMKQGYRVLGLNIRILDTPDEHPSLAPSPLLISDHA 57 Query: 57 DAQAVCDKLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAA 116 D Q + ++N +A + V F A+Y AG+TPNP ++CNK+IK+ LE A Sbjct: 58 DYQ-------FPVFSLNLSARFSQEVIRYFQADYLAGKTPNPCMVCNKKIKWHGLLEGA- 109 Query: 117 EDLGADYIATGHYVRRADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKP 176 LGA+ IATGHY R A +DG+ RL +GLD KDQSYFL+ LS + ++ FP+GEL K Sbjct: 110 RLLGAERIATGHYARTASLDGRVRLYKGLDPQKDQSYFLWMLSQNDLNKTCFPLGELAKE 169 Query: 177 QVRKIAEDLGLVTAKKKDSTGICFIGERKFREFLGRYLPAQP-----GKIITVDGDEIGE 231 +VR++A G+ A+KK+S ICF+ + +L +P G I+ +G +G+ Sbjct: 170 KVRELARTFGVRAAEKKESQEICFVPHDDYCRYLELAVPGLKEKVAGGDIVDENGKVLGK 229 Query: 232 HQGLMYHTLGQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQ 291 H+G ++T+GQR+GLG+ + EP YV D ENN + L + L Sbjct: 230 HRGYPFYTIGQRRGLGLS-----STEPLYVTALDQENNCVHTGNKS---SLDTRSLTVSG 281 Query: 292 LHWVDREPFTGTMRCTVKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTPGQSAVFYNG 351 L+W++ + + K RYR + PCT+ L D + + F AV PGQ+AVFY+ Sbjct: 282 LNWINNKSLDEPVEAFGKIRYRDRETPCTIAPLPDGQATITFHTAKHAVAPGQAAVFYHD 341 Query: 352 EVCLGGGIIEQR 363 E LGGG I Sbjct: 342 EEVLGGGFISAV 353 >UniRef50_C0QRH5 tRNA-specific 2-thiouridylase mnmA n=8 Tax=Aquificales RepID=MNMA_PERMH Length = 353 Score = 365 bits (936), Expect = 2e-99, Method: Composition-based stats. Identities = 128/359 (35%), Positives = 205/359 (57%), Gaps = 13/359 (3%) Query: 7 KVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWE--EDDGEEYCTAAADLADAQAVCDK 64 +V VGMSGGVDSSV+A LL+++GY V G+ +K + + C + D+ DA+ V Sbjct: 2 RVAVGMSGGVDSSVAALLLKEKGYDVIGVTLKLSSIVCSNDIQVCCSPQDIKDAKRVASY 61 Query: 65 LGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGADYI 124 LGIE + +++ + + V F+ EYK G+TPNP +CN+E+K +F LGAD Sbjct: 62 LGIEHYVIDWEDIFREKVINYFVEEYKKGKTPNPCSVCNREVKTGRLAKFVNIVLGADKF 121 Query: 125 ATGHYVRRADVDG-KSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQVRKIAE 183 ATGHY++ D + RG D KDQSYF+ L + + +FP+ +L K +VRKIAE Sbjct: 122 ATGHYIKIEDHPVYGKVIKRGSDIKKDQSYFMALLERDVLDLLIFPLSDLTKEEVRKIAE 181 Query: 184 DLGLVTAKKKDSTGICFIGERKFREFL--GRYLPAQPGKIITVDGDEIGEHQGLMYHTLG 241 D + ++KK+S ICF + E+L L + G I+ +DG +G+H+GL ++T+G Sbjct: 182 DYKIPVSQKKESFEICFTAGKTPAEYLLENNLLAFESGDIVHIDGKTVGKHKGLPFYTVG 241 Query: 242 QRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLHWVDREPFT 301 QR+GLG+ EP YV++KD E N +VV + +L++ + ++ +++ Sbjct: 242 QRRGLGV-----RWREPLYVIEKDAERNTVVVGERE---KLLTDHVSSEDFNFLVPVEKW 293 Query: 302 GTMRCTVKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTPGQSAVFYNGEVCLGGGII 360 +V+ RYRQ + +++ +R+ F++P GQ Y+G++ LGGGII Sbjct: 294 KKEGLSVQGRYRQKAVKIKDVSIEGNRLTAYFEKPEERFAKGQVLAVYDGDILLGGGII 352 >UniRef50_B9WA49 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase, putative n=3 Tax=Saccharomycetales RepID=B9WA49_CANDC Length = 424 Score = 365 bits (936), Expect = 2e-99, Method: Composition-based stats. Identities = 139/373 (37%), Positives = 199/373 (53%), Gaps = 16/373 (4%) Query: 2 SETAKKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYCTAAADLADAQAV 61 + +IV MS GVDSSV A L + V GL+M NW + D D Q V Sbjct: 58 PKPDDHIIVAMSSGVDSSVCAALFKD-YPNVHGLYMANWSQ----SATCTERDWKDVQRV 112 Query: 62 CDKLGIE-LHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLG 120 C LGI VNF EYW +VF + +Y+ G TPNPDI CNK +KF +++ E Sbjct: 113 CRDLGISSCERVNFEHEYWHDVFVPMIEKYEKGLTPNPDIGCNKFVKFGKLIDYLHEKYD 172 Query: 121 AD--YIATGHYVRRA--DVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKP 176 ++ TGHY R + G+ LLRGL KDQSY+L ++ +++ L P+G KP Sbjct: 173 GKDWWLVTGHYARIMKHNETGEYHLLRGLSQRKDQSYYLSSIPPRSLSKILLPIGHYIKP 232 Query: 177 QVRKIAEDL-GLVTAKKKDSTGICFI--GERKFREFLGRYLPAQPGKIITVDGDEIGEHQ 233 Q+RK+A D L TA K DS G+CF+ + FREFL Y+P PG I+T DG G H+ Sbjct: 233 QIRKLAHDRFQLHTATKPDSQGLCFVNPQQSNFREFLNDYIPENPGDIVTEDGKVWGRHK 292 Query: 234 GLMYHTLGQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLH 293 GL + T+GQ+ + + + W+V DK+ E N +++ +GH++PRL + QL Sbjct: 293 GLWHATIGQKSSVCMPQADPKYQGIWFVSDKNYEKNQIIIVKGHDNPRLFKQTVELTQLE 352 Query: 294 WVDREPFTGTMRCTVKTRYR--QTDIPCTVKALDDDRIEVIFDEPVAAVTPGQSAVFYNG 351 W+ + +R + +Y IP D++ V + PV A+ PGQ+ V YNG Sbjct: 353 WLCPKEEVIHLRGL-QFQYHSLSKSIPVKRVIDSGDKLVVELETPVRALAPGQAGVLYNG 411 Query: 352 EVCLGGGIIEQRL 364 LGGG+I + + Sbjct: 412 NRVLGGGMISRTM 424 >UniRef50_O13947 Mitochondrial tRNA-specific 2-thiouridylase 1 n=1 Tax=Schizosaccharomyces pombe RepID=MTU1_SCHPO Length = 415 Score = 364 bits (934), Expect = 4e-99, Method: Composition-based stats. Identities = 139/384 (36%), Positives = 202/384 (52%), Gaps = 21/384 (5%) Query: 2 SETAKKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNW-EEDDGEEYCTAAADLADAQA 60 ++ KV V MSGGVDSS SA+LL+ QGY VEG+FM+NW +ED C A D A Q Sbjct: 28 PKSQDKVFVAMSGGVDSSFSAYLLKSQGYNVEGVFMRNWLDEDSAPSGCPAERDWATVQK 87 Query: 61 VCDKLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDL- 119 VC KL I NF EYW+ VFE L Y+ G TPNPD+ CN+++KF A + + Sbjct: 88 VCKKLNISCRRFNFEKEYWNLVFEPSLDLYENGLTPNPDVSCNRQVKFGALFDALKKHCE 147 Query: 120 ----GADYIATGHYVR--RADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGEL 173 G ++A+GHY + +S + D KDQ+ FL T+ E + +++FP+ Sbjct: 148 NNVKGDWWLASGHYAKSVVNIETNESHMCIPTDKRKDQTLFLCTIRKEALEKTIFPLHNW 207 Query: 174 EKPQVRKIAEDLGL-VTAKKKDSTGICFIG---ERKFREFLGRYLPAQPGKI-----ITV 224 K V+K A G A+K++S G+CF+ RKFR+FL RYL I V Sbjct: 208 TKENVKKQASSAGFKEIAEKQESQGLCFVSPNVGRKFRKFLQRYLNFSDRPIKVIAGKNV 267 Query: 225 DGDEIGEHQGLMYHTLGQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMS 284 G+ G H G+ T+G+R GL + + WYV KD++NN L + +G + LMS Sbjct: 268 VGEFSGNH-GIWSLTVGERCGLSLPQAQSEYFGRWYVWKKDIKNNALYICRGTNNELLMS 326 Query: 285 VGLIAQQLHWVDREPFTGT---MRCTVKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVT 341 + + W + + C V+ R++Q P V + + +++ F + AVT Sbjct: 327 KCIYLKDWKWCGTKLQNLEKSALSCFVRVRHQQPLQPAKVTWRNPESVKIHFQDKQRAVT 386 Query: 342 PGQSAVFYNGEVCLGGGIIEQRLP 365 PGQ Y +VCLGGG+++ P Sbjct: 387 PGQVIAVYVNDVCLGGGMVDTVEP 410 >UniRef50_A6KZV1 tRNA-specific 2-thiouridylase mnmA 3 n=23 Tax=Bacteroides RepID=MNMA3_BACV8 Length = 375 Score = 364 bits (934), Expect = 4e-99, Method: Composition-based stats. Identities = 131/370 (35%), Positives = 197/370 (53%), Gaps = 18/370 (4%) Query: 1 MSETAKKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDD--GEEYCTAAADLADA 58 M+ K+V+VGMSGG+DSS + +LQ+QGY+V G+ M+ W+ D+ +A Sbjct: 1 MNNRDKRVLVGMSGGIDSSATCIMLQEQGYEVVGVTMRTWDVPSRFSTPGQDEPDDVLEA 60 Query: 59 QAVCDKLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAED 118 +A+ ++LGIE H + E+ + + F+ EY GRTPNP +LCN K + E+A + Sbjct: 61 RALAERLGIEHHVADVRKEFKQIIVKHFIDEYMQGRTPNPCVLCNPLFKERILCEWA-DQ 119 Query: 119 LGADYIATGHYVRRADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQV 178 +I+TGHY R + GK ++ G D KDQSYFL+ L E + + LFP+G K +V Sbjct: 120 TNCAHISTGHYCRLEERKGKLYIVAGDDQTKDQSYFLWKLPQEILQRFLFPLGTYTKQEV 179 Query: 179 RKIAEDLGLVTAKKK-DSTGICFIGERKFREFLGRYLPA-----QPGKIITVDGDEIGEH 232 R+ G + +S ICFI E +R FL P PG + G +IG+H Sbjct: 180 REYLRQKGFEAKARGGESMEICFI-EGDYRNFLRSQCPDIDTQVGPGWFVNSKGVKIGQH 238 Query: 233 QGLMYHTLGQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQL 292 +G Y+T+GQRKGL I P YV+ + E N +++ + L + ++ + Sbjct: 239 KGFPYYTIGQRKGLEIALGH-----PAYVLRINAEKNTVMLG---DAEELKAEYMLVEDY 290 Query: 293 HWVDREPFTGTMRCTVKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTPGQSAVFYNGE 352 H + + +V+ RYR IPC V LD+ ++ V F +A+ PGQSAVFY G+ Sbjct: 291 HITEMQDLLQCKDLSVRIRYRSKPIPCQVLVLDEKQLLVRFLSEASAIAPGQSAVFYEGK 350 Query: 353 VCLGGGIIEQ 362 LGG I Sbjct: 351 RVLGGAFIAS 360 >UniRef50_Q5L8X6 tRNA-specific 2-thiouridylase mnmA 3 n=6 Tax=Bacteroides RepID=MNMA3_BACFN Length = 362 Score = 364 bits (934), Expect = 4e-99, Method: Composition-based stats. Identities = 131/368 (35%), Positives = 208/368 (56%), Gaps = 27/368 (7%) Query: 1 MSETAKKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYCTAAADLADAQA 60 M E+ K+V+VGMSGG+DS+ + +LQ+QGY++ G+ M+ W ++ DA+ Sbjct: 1 MKESKKRVLVGMSGGIDSTATCLMLQEQGYEIVGVTMRVWGDEP-----------QDARE 49 Query: 61 VCDKLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLG 120 + ++GIE + + + D + + F+ EY+ GRTPNP ++CN KF+ +E+A + LG Sbjct: 50 LAARMGIEHYVADERVPFKDTIVKNFIDEYRQGRTPNPCVMCNPLFKFRMLIEWA-DKLG 108 Query: 121 ADYIATGHYVRRADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQVRK 180 D+IATGHY R + +G ++ G D KDQSYFL+ L + + + +FP+G K VR Sbjct: 109 CDWIATGHYSRLEERNGHIYIVAGDDDKKDQSYFLWRLGQDVLRRCIFPLGNYTKQTVRD 168 Query: 181 IAEDLGLVTAKKK-DSTGICFIGERKFREFLGRYLPA-----QPGKIITVDGDEIGEHQG 234 + G K+ +S +CFI + +R+FL P PG ++ +G ++G+H+G Sbjct: 169 YLREKGYEAKSKEGESMEVCFI-KGDYRDFLREQCPELDAEVGPGWFVSSEGVKLGQHKG 227 Query: 235 LMYHTLGQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLHW 294 Y+T+GQRKGL I K P YV+ + + N +++ + +L + ++A+Q + Sbjct: 228 FPYYTIGQRKGLEIALGK-----PAYVLKINPQKNTVMLG---DAGQLRAEYMVAEQDNI 279 Query: 295 VDREPFTGTMRCTVKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTPGQSAVFYNGEVC 354 VD + V+ RYR IPC VK L+D R+ V F +A+ PGQSAVFY G Sbjct: 280 VDEDELFACPDLAVRIRYRSRPIPCRVKRLEDGRLLVRFLAEASAIAPGQSAVFYEGRRV 339 Query: 355 LGGGIIEQ 362 LGG I Sbjct: 340 LGGAFIAS 347 >UniRef50_B1I677 tRNA-specific 2-thiouridylase mnmA n=1 Tax=Candidatus Desulforudis audaxviator MP104C RepID=MNMA_DESAP Length = 343 Score = 363 bits (931), Expect = 7e-99, Method: Composition-based stats. Identities = 124/358 (34%), Positives = 185/358 (51%), Gaps = 26/358 (7%) Query: 8 VIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYCTAAADLADAQAVCDKLGI 67 V V +SGGVDSS +A L+++ G++V L M + E A V LG+ Sbjct: 4 VAVALSGGVDSSTTALLMKEAGHRVFTLTMATNDRVAAE-----------AARVSAFLGL 52 Query: 68 ELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGADYIATG 127 H ++ + + V F A Y GRTPNP I CN+++K+ A + GADY ATG Sbjct: 53 PHHVLDISGLFEQRVIGPFCAAYLEGRTPNPCIACNRDLKYGTLFRQAV-EWGADYFATG 111 Query: 128 HYVRRA--DVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQVRKIAEDL 185 HY R G+ LLR D KDQSY L+ L E++A+ L P+G+L K VR+ A Sbjct: 112 HYARVRFEPEPGRYVLLRARDPRKDQSYVLFYLDQERLARLLLPLGDLTKETVREKARAA 171 Query: 186 GLVTAKKKDSTGICFIGERKFREFLGRYLP--AQPGKIITVDGDEIGEHQGLMYHTLGQR 243 G+ +S ICF+ +R F+ R G + G+ +G H+G+ ++T+GQR Sbjct: 172 GIPFTA-AESQEICFVAGDDYRTFIRRRCGQAVAEGPFVDRQGNVLGRHRGIPFYTIGQR 230 Query: 244 KGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLHWVDREPFTGT 303 +GLG+ + P +V+ + E N ++V E L +A +H++ +P GT Sbjct: 231 RGLGLALGR-----PVFVLGFNRERNAVIVGPEEE---LWHTAFLAVDVHYILPQPAGGT 282 Query: 304 MRCTVKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTPGQSAVFYNGEVCLGGGIIE 361 + + RYR P + D V+F++P A+TPGQ+AVFY GE +GGGII Sbjct: 283 L-IEAQIRYRAKAAPARLYPQPPDAARVVFEKPQRAITPGQAAVFYQGERVVGGGIIS 339 >UniRef50_Q1NYA2 TRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase n=3 Tax=Deltaproteobacteria RepID=Q1NYA2_9DELT Length = 443 Score = 363 bits (931), Expect = 8e-99, Method: Composition-based stats. Identities = 143/377 (37%), Positives = 197/377 (52%), Gaps = 37/377 (9%) Query: 5 AKKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYCTAAADLADAQAVCDK 64 ++V V MSGGVDSSV+A LLQQ G +V G+FM+ + + A A AV D Sbjct: 75 GRQVAVAMSGGVDSSVTAALLQQAGAEVRGVFMRLAQPEV-------EAHRQRAAAVADF 127 Query: 65 LGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGADYI 124 LGIEL ++ A + V F+ Y AG TPNP + CN+ IKF LE G + + Sbjct: 128 LGIELTVLDLAQPFRQQVLNPFVEAYLAGLTPNPCVFCNRLIKFGLLLEILLAQ-GVELL 186 Query: 125 ATGHYVRRADV-DGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQVRKIAE 183 ATGHYVR G RL RGLD KDQSYFL L+ E++ + LFP+G+ K +V ++A Sbjct: 187 ATGHYVRLLPAATGGRRLCRGLDPGKDQSYFLCRLAAEKLPRLLFPLGDKHKSEVYQLAA 246 Query: 184 DLGLVTAKKKDSTGICFIGERKFREFLGRY--------------------LPAQPGKIIT 223 LGL +S +CF+G++ +FL + L A+ G+I+T Sbjct: 247 RLGLSGRHGSESQDVCFLGKQSVGDFLAAHGPPGGAEGAGPAAGGGEVSELRARQGRIVT 306 Query: 224 VDGDEIGEHQGLMYHTLGQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLM 283 VDG E+G+H G+ +T+GQR+GLGI P+YVV D N++VV + + L Sbjct: 307 VDGRELGQHGGVHRYTVGQRRGLGIPDA-----TPYYVVALDAARNLVVVGKPED---LQ 358 Query: 284 SVGLIAQQLHWVDREPFTGTMRCTVKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTPG 343 + L+W+ P R V+ R+R P ++ D V FDEP A PG Sbjct: 359 RRLIRLADLNWLTTAPPPLPARFAVQLRHRHRPAPALIEPAADGTFSVSFDEPQRAPAPG 418 Query: 344 QSAVFYNGEVCLGGGII 360 Q A Y+GE L GG I Sbjct: 419 QYAALYDGEQLLAGGEI 435 >UniRef50_C9RNM8 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase n=1 Tax=Fibrobacter succinogenes subsp. succinogenes S85 RepID=C9RNM8_FIBSS Length = 355 Score = 361 bits (927), Expect = 2e-98, Method: Composition-based stats. Identities = 143/360 (39%), Positives = 199/360 (55%), Gaps = 10/360 (2%) Query: 4 TAKKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYCTAAADLADAQAVCD 63 + +V VGMSGGVDSSV+A LLQQQGY+V G+ ++ + D + A+ + + Sbjct: 2 SKTRVAVGMSGGVDSSVAALLLQQQGYEVVGVTLRVLPDVDSAFDVENDPSVVRAKMIAE 61 Query: 64 KLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGADY 123 KLGIE H N + + V + A++ RTPNP CN+ IKF +++A + LGA++ Sbjct: 62 KLGIEHHVANCSDAFTGEVLKRCHADFSHARTPNPCCYCNRFIKFGWMMDYA-KSLGAEF 120 Query: 124 IATGHYVRRADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQVRKIAE 183 +ATGHYVR +V+G RLLRG D KDQSYFL+ + E+ L P+G K +VR+IA Sbjct: 121 LATGHYVRIEEVNGVRRLLRGRDPGKDQSYFLFWVPDERRNHVLTPLGTYVKSEVREIAA 180 Query: 184 DLGLVTAKKKDSTGICF-IGERKFREFLGRYLPA--QPGKIITVDGDEIGEHQGLMYHTL 240 G V AK DS ICF I ++ EFL +PG+ + G H G +T+ Sbjct: 181 QNGFVNAKTGDSQDICFDIYGSQYTEFLKDRFGEMTRPGRFVDEKGKVWNTHDGFHKYTV 240 Query: 241 GQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLHWVDREPF 300 GQRKGLG+ P +V D E ++V V ++ + H RE Sbjct: 241 GQRKGLGVAIGV-----PAFVKHVDPETGDILVTGDKSSVCFDRVEMVNCEWHGGVREVG 295 Query: 301 TGTMRCTVKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTPGQSAVFYNGEVCLGGGII 360 T T R RYRQ + C V +D ++ +FDEP+ AVTPGQ AVFY+G++ LGGG I Sbjct: 296 T-TFRAEGMVRYRQRAVGCEVTIVDTNKAVAVFDEPLFAVTPGQCAVFYDGDMVLGGGQI 354 >UniRef50_Q0SMH1 tRNA-specific 2-thiouridylase mnmA n=25 Tax=Bacteria RepID=MNMA_BORAP Length = 355 Score = 361 bits (927), Expect = 2e-98, Method: Composition-based stats. Identities = 127/362 (35%), Positives = 201/362 (55%), Gaps = 13/362 (3%) Query: 7 KVIVGMSGGVDSSVSAWLLQQQGY-QVEGLFMKNWEEDDGE--EYCTAAADLADAQAVCD 63 K+ V +SGGVDSSV+ + + +GY ++ ++K W ED+ C DL +AVC Sbjct: 2 KIAVLLSGGVDSSVALYRIINKGYTSIKCYYLKIWLEDELSYIGSCPWQEDLNYVEAVCS 61 Query: 64 KLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGADY 123 K + +NF EY++ V + E K G TP+PDI CN+ IKF AF E E D Sbjct: 62 KFNVPYEIINFQKEYYNKVVSYTIKELKNGNTPSPDIFCNQRIKFGAFFEKINEQ--YDL 119 Query: 124 IATGHYVRRADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQVRKIAE 183 + TGHY + D K L + D KDQSYFL LS +Q+++ FP+G L K +VR+IA+ Sbjct: 120 VVTGHYAKIQTKDKKFFLKQAKDKIKDQSYFLSHLSQKQMSKLYFPLGTLLKSEVRQIAK 179 Query: 184 DLGLVTAKKKDSTGICFIGERKFREFLGRYLPAQPGKIITVD-GDEIGEHQGLMYHTLGQ 242 ++ L +KDS GICF+G+ K+ EF+ +L + G II + G IG H G + T+GQ Sbjct: 180 NINLPNKNRKDSQGICFLGKIKYNEFIKYHLGEKKGNIIEKETGKIIGTHNGYWFFTVGQ 239 Query: 243 RKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLHWVDREPFTG 302 R+G+ + + PW+V++KD+E NI+ ++ + + + ++HW++ P Sbjct: 240 RRGIKL------SNGPWFVIEKDLEKNIIYISHNENYSKQAKRKFLVHEIHWINGTPSDF 293 Query: 303 TMRCTVKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTPGQSAVFYNGEVCLGGGIIEQ 362 +K R+ + C +K + + IE+ ++ ++PGQ A+FY CLGG I + Sbjct: 294 E-NFKIKIRHGEKKYSCKLKLIAKNLIEISLNKKDYGISPGQFAIFYKNTECLGGAKIFK 352 Query: 363 RL 364 + Sbjct: 353 VM 354 >UniRef50_C0QG63 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QG63_DESAH Length = 365 Score = 361 bits (926), Expect = 3e-98, Method: Composition-based stats. Identities = 138/356 (38%), Positives = 204/356 (57%), Gaps = 24/356 (6%) Query: 9 IVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYCTAAADLADAQAVCDKLGIE 68 + MSGG+DS V+A +L++QG+ + G+ E + D ++ D+L I+ Sbjct: 31 AIAMSGGIDSLVAAHVLKRQGHDLVGIHFTTGFESEAV----------DLSSIEDQLDIK 80 Query: 69 LHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGADYIATGH 128 +H ++ +AE+ V + F+ Y G+TPNP ++CN+ IKF + A + LGA+ IATGH Sbjct: 81 IHQMDLSAEFNRAVVDYFVKTYARGKTPNPCVVCNRTIKFGVLAQRA-KTLGAEKIATGH 139 Query: 129 YVRRAD-VDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQVRKIAEDLGL 187 Y +G L++G+D KDQSYFL LS EQ+ Q++FP+G + K QVR IA D L Sbjct: 140 YAGTRTRSNGGIALVKGVDGVKDQSYFLAMLSQEQLKQAVFPLGRMTKEQVRNIARDNRL 199 Query: 188 VTAKKKDSTGICFIGERKFREFLGRYL--PAQPGKIITVDGDEIGEHQGLMYHTLGQRKG 245 + ++K+S ICFI F F+ L P PG I+ DG +G H+GL +T+GQR+G Sbjct: 200 MPVEEKESQDICFIKAPGFSGFVAARLSTPPSPGDIVLTDGTVVGRHRGLHRYTIGQRRG 259 Query: 246 LGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLHWVDREPFTGTMR 305 L G EP+YV D+ENN+LVV E L ++ + L+W+ P +++ Sbjct: 260 LNSPG-----PEPYYVKTIDMENNLLVVGGKKE---LYTIKVAVGDLNWITP-PLASSLK 310 Query: 306 CTVKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTPGQSAVFYNGEVCLGGGIIE 361 T K RY T+ +++DR ++FD P AVTPGQ AVFY E LG GII+ Sbjct: 311 VTTKIRYSHKGAASTLS-IENDRTTLVFDAPQLAVTPGQVAVFYRDEEVLGAGIIQ 365 >UniRef50_A2CB44 tRNA-specific 2-thiouridylase mnmA n=60 Tax=cellular organisms RepID=MNMA_PROM3 Length = 409 Score = 361 bits (926), Expect = 3e-98, Method: Composition-based stats. Identities = 139/381 (36%), Positives = 205/381 (53%), Gaps = 36/381 (9%) Query: 6 KKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYCTAAADLADAQAVCDKL 65 ++V VG+SGGVDSS+SA LL + G+QVEGL + G+ C + L DA +C++L Sbjct: 35 QRVAVGLSGGVDSSLSAALLVEAGWQVEGLTLWLM---SGKGACCSDG-LIDAAGICEQL 90 Query: 66 GIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGADYIA 125 I H V+ A + + + + Y+ G TP P CN+ +KF A L +A ++ +A Sbjct: 91 KIPHHVVDSRATFQAEIVDQLVQGYQQGVTPLPCSRCNRSVKFAAMLSWAEKERQLHRVA 150 Query: 126 TGHYVRRAD-------------VDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGE 172 TGHY R G+ +LLRGLD NKDQSYFLY LS + +A+ +FP+GE Sbjct: 151 TGHYARIRHREDPEPQQALPGDSSGRHQLLRGLDQNKDQSYFLYDLSQDVLAKVIFPLGE 210 Query: 173 LEKPQVRKIAEDLGLVTAKKKDSTGICFIGE-RKFREFLGRYLPAQPGKIITVDGDEIGE 231 L K + R+ AE GL TAKK +S +C + FL YLPA+ G+I+ DG +GE Sbjct: 211 LTKAETRQEAERYGLRTAKKAESQDLCLADHYGSMKAFLDNYLPARQGEIVLQDGKVVGE 270 Query: 232 HQGLMYHTLGQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQ 291 H G+ + T+GQRKGLG+ EP +VV D N ++VA E + Sbjct: 271 HDGIEHFTIGQRKGLGV-----AWREPLHVVQLDATANRVIVAPRAEAG---RDSCVVGA 322 Query: 292 LHWVDREPFTGTMRCTVKTRYRQTDIPCTVKALD----------DDRIEVIFDEPVAAVT 341 ++W+ P + + V+ RYR + + ++ R + F+E ++T Sbjct: 323 VNWISIAPPSSAIDVEVQVRYRSGPVAAQLIPIEATAEDIAADRPHRCRLTFNEEQFSIT 382 Query: 342 PGQSAVFYNGEVCLGGGIIEQ 362 PGQ+AVFY + LGGG+I+Q Sbjct: 383 PGQAAVFYAADAVLGGGLIQQ 403 >UniRef50_D1N0N9 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase n=1 Tax=Victivallis vadensis ATCC BAA-548 RepID=D1N0N9_9BACT Length = 358 Score = 360 bits (925), Expect = 4e-98, Method: Composition-based stats. Identities = 138/365 (37%), Positives = 187/365 (51%), Gaps = 15/365 (4%) Query: 5 AKKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEY---CTAAADLADAQAV 61 +KVIV +SGGVDSSV+A L QQ G +V G+ ++ D C + D A +++ Sbjct: 2 KEKVIVALSGGVDSSVAAVLAQQAGCEVIGVTLRLKHPDPEFSAAQLCASKNDEAAVESI 61 Query: 62 CDKLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGA 121 C KLGIE H + E+ V EY GRTPNP CN IKF +EFA +GA Sbjct: 62 CAKLGIEHHYLELFPEFECKVLRPAAQEYARGRTPNPCCECNYRIKFGKLVEFA-RSVGA 120 Query: 122 DYIATGHYVRRADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQVRKI 181 + TGHY + ++ G L RG D KDQSYFLY L ++ FPVG ++K +VR+I Sbjct: 121 AKVLTGHYAKLSEHGGVYELRRGDDLKKDQSYFLYRLDQAILSMVRFPVGAMDKGEVRRI 180 Query: 182 AEDLGLVTAKKKDSTGICF-IGERKFREFLG--RYLPAQPGKIITVDGDEIGEHQGLMYH 238 A + GLVT+ K DS CF + F E L LP +PG G +G H G+ Sbjct: 181 AAEYGLVTSDKPDSQDACFQVPGESFGETLRRLEKLPRRPGLFR-YQGRIVGRHNGVHEF 239 Query: 239 TLGQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLHWVDRE 298 T+GQRKGL + P YV D E+ + + E RL++ +++ W Sbjct: 240 TIGQRKGLNVALGV-----PAYVAGIDPESGDIRL--ETEPERLLASRFTVERVSWQSGR 292 Query: 299 PFTGTMRCTVKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTPGQSAVFYNGEVCLGGG 358 + V+ RYR +PC V+ V P AVTPGQ+AVFY G++ LGGG Sbjct: 293 APDLSGELEVQIRYRSRAVPCRVEPDGAGGAAVFPAIPQRAVTPGQAAVFYRGDLLLGGG 352 Query: 359 IIEQR 363 +I Sbjct: 353 VIGHA 357 >UniRef50_B7G8R2 Predicted protein (Fragment) n=1 Tax=Phaeodactylum tricornutum CCAP 1055/1 RepID=B7G8R2_PHATR Length = 368 Score = 360 bits (925), Expect = 4e-98, Method: Composition-based stats. Identities = 137/369 (37%), Positives = 198/369 (53%), Gaps = 15/369 (4%) Query: 8 VIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDD--GEEYCTAAADLADAQAVCDKL 65 V + +SGGVDSSV+ LL QQGY V ++K W ED+ +C D Q VC++ Sbjct: 1 VALLLSGGVDSSVALNLLVQQGYDVTAFYLKIWLEDELAHLGHCPWEDDYRVCQEVCEQA 60 Query: 66 GIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGADYIA 125 GI L TV+ Y V + E + GRTPNPDI+CN +KF F E A + D++A Sbjct: 61 GIPLETVSLQNAYKSRVIAYTVHEAEQGRTPNPDIMCNSRVKFGCFYE-AIDQREFDFVA 119 Query: 126 TGHYVRRAD--VDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQVRKIAE 183 +GHY + G RLLR D KDQSYFL TL+ +Q+ + LFP+G L+K QVR +A+ Sbjct: 120 SGHYAQLVKDTETGSMRLLRAPDPIKDQSYFLCTLTQDQLQRVLFPIGHLQKSQVRDLAD 179 Query: 184 DLGLVTAKKKDSTGICFIGERKFREFLGRYLPAQPGKIITV-DGDEIGEHQGLMYHTLGQ 242 + L + DS G+CF+G+ KF EFL YL +PG I+ GD +G+H G+ YHT+GQ Sbjct: 180 EFILPNRLRPDSQGLCFLGKVKFDEFLAVYLGTRPGPIVDAGTGDVVGQHHGVWYHTVGQ 239 Query: 243 RKGLG-IGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLM--SVGLIAQQLHWVDREP 299 RKG+G + + PWYVV KD +++ + ++ + +HW+ + Sbjct: 240 RKGIGRVLDPLATSRGPWYVVAKDPGKDVVYCSNQYDEDIFTASRSEFAVENIHWIAGQA 299 Query: 300 FT-----GTMRCTVKTRYRQTDIPCTVKALDD-DRIEVIFDEPVAAVTPGQSAVFYNGEV 353 R +K R+ + T++ + +V D + PGQ VFY E Sbjct: 300 PPNLLKGDGGRFVMKIRHGPDLVKGTLRLTNTAGEGDVKLDSKDGGLAPGQYVVFYKDEE 359 Query: 354 CLGGGIIEQ 362 CLG G+I + Sbjct: 360 CLGAGVISE 368 >UniRef50_Q7NBZ0 tRNA-specific 2-thiouridylase mnmA n=6 Tax=cellular organisms RepID=MNMA_MYCGA Length = 657 Score = 360 bits (925), Expect = 4e-98, Method: Composition-based stats. Identities = 154/378 (40%), Positives = 216/378 (57%), Gaps = 21/378 (5%) Query: 3 ETAKKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNW-----------EEDDGEEYCTA 51 + KV+V +SGGVDS+V A+LLQQQGY V FM+NW DD + C A Sbjct: 284 QEKPKVVVALSGGVDSAVCAYLLQQQGYDVVAAFMQNWDKDLNFELLSDHADDQIQGCDA 343 Query: 52 AADLADAQAVCDKLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAF 111 D D Q +C++L I+L+ NF +YW++VF L +YK G TPNPD+LCN+ KF F Sbjct: 344 KQDYEDTQKLCEQLKIKLYHFNFVEQYWNDVFLKVLEDYKKGLTPNPDVLCNQFGKFGWF 403 Query: 112 LEFAAEDLGAD-YIATGHYVRRADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPV 170 + + G D IA GHY + D + L+ D NKDQ+YFL L EQ+ +FP+ Sbjct: 404 INALRKQFGDDIKIAFGHYAKLITKDDEVFLVHTKDHNKDQTYFLTMLKKEQLKNIIFPL 463 Query: 171 GELEKPQVRKIAEDLGLVTAKKKDSTGICFIGERKFREFLGRYLPAQPGKIITVD-GDEI 229 EL+KP VR+IA+ L A KKDSTGICFIGER F++FL YL + G II +D +I Sbjct: 464 SELDKPTVREIAKQANLYVANKKDSTGICFIGERNFKQFLSNYLAIKKGPIILIDENKKI 523 Query: 230 GEHQGLMYHTLGQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVA-QGHEHPRLMSVGLI 288 GEH GL ++T+GQ + L +G GT+E +V DKD NN L V + + L SV Sbjct: 524 GEHDGLYFYTIGQSRRLHVG----GTKEKIFVCDKDYNNNTLYVCYESSKDQYLSSVSCE 579 Query: 289 AQQLHW-VDREPFTGTMRCTVKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTPGQSAV 347 ++ +W +D + + ++ R+RQ C + + DD++ V + VTPGQ V Sbjct: 580 LEKFNWLIDTKDQLFNKKLWIRFRHRQKLQECEIVSYHDDKVIVKY-TKQIGVTPGQYGV 638 Query: 348 FYNGE-VCLGGGIIEQRL 364 Y+ +GGG I + + Sbjct: 639 IYDQNLWVVGGGKITKII 656 >UniRef50_Q6C0F9 YALI0F25069p n=1 Tax=Yarrowia lipolytica RepID=Q6C0F9_YARLI Length = 399 Score = 360 bits (925), Expect = 4e-98, Method: Composition-based stats. Identities = 130/371 (35%), Positives = 198/371 (53%), Gaps = 15/371 (4%) Query: 1 MSETAKKVIVGMSGGVDSSVSAWLLQQQGY-QVEGLFMKNWEEDDGEEYCTAAADLADAQ 59 + V V MS GVDSSV+A L+ ++ +V G+FM+NW D A AD D Q Sbjct: 32 LPGPNDHVYVAMSAGVDSSVTAALMAERYKGRVTGVFMRNWSPDSK----CAEADWNDVQ 87 Query: 60 AVCDKLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDL 119 VC + I ++ EYW VFE L Y+ G TPNPD+ CN+ IKF + + Sbjct: 88 QVCAHIDIPAVNLSLEKEYWLEVFEPMLERYRQGLTPNPDVSCNRYIKFGSLKHRLKDRH 147 Query: 120 ------GADYIATGHYVRRA-DVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGE 172 G ++ATGHY R D G L R KDQSY+L +++ + + +FP+ + Sbjct: 148 ENSGMEGDWWLATGHYARVMTDESGTPGLFRPKHLAKDQSYYLSSVNSDSLRNVMFPLSD 207 Query: 173 LEKPQVRKIAEDLGLVTAKKKDSTGICFIGE--RKFREFLGRYLPAQPGKIITVDGDEIG 230 KP++R++A L A K DS G+CF+ + RKFR+FL Y+ PG +IT +G+ +G Sbjct: 208 YLKPEIREMAHAYKLHVASKPDSQGLCFVSQDQRKFRDFLSDYISTTPGNVITEEGEVVG 267 Query: 231 EHQGLMYHTLGQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQ 290 +H GL T+GQ+ G+ + W+V +K+++ N LV+ +G HP L S + A+ Sbjct: 268 QHNGLWNATVGQKSGICLPQGNPKYRGSWFVKEKNIDTNELVIVKGGNHPSLFSSNIKAK 327 Query: 291 QLHWVDREPFT-GTMRCTVKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTPGQSAVFY 349 W+ +P M T++ R + T A++ + I + PV AV+PGQ+ V Y Sbjct: 328 YFSWLGTKPADLSGMNLTIQFRSLMEPVAITNLAIEGEDIAIRTAVPVRAVSPGQNLVLY 387 Query: 350 NGEVCLGGGII 360 + + LG G+I Sbjct: 388 HEDRVLGCGVI 398 >UniRef50_A9EXM5 tRNA-specific 2-thiouridylase mnmA n=4 Tax=Myxococcales RepID=MNMA_SORC5 Length = 385 Score = 360 bits (923), Expect = 6e-98, Method: Composition-based stats. Identities = 127/373 (34%), Positives = 191/373 (51%), Gaps = 21/373 (5%) Query: 2 SETAKKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEE---YCTAAADLADA 58 + +V + MSGGVDSSV+A L GY+V G+ + W+ D C A D DA Sbjct: 18 PSSGARVFIAMSGGVDSSVAAARLCDAGYEVVGVTLHLWDYPDDGSVKSRCCAPEDQHDA 77 Query: 59 QAVCDKLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAED 118 + V D LGI +T + A + ++V + F+ Y AG TP+P + CN+ +K + AE Sbjct: 78 RRVADHLGIPHYTFDRRALFREHVVDPFVEAYLAGETPSPCVACNRSVKLRELF-PLAER 136 Query: 119 LGADYIATGHYVRRADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQV 178 LG ++ATGHY R +G +RL RG D +KDQSYFL+ L +++++ LFP+G+ K +V Sbjct: 137 LGVSWVATGHYARVVLEEGGARLYRGRDRHKDQSYFLHMLRSDELSRLLFPLGDSTKDEV 196 Query: 179 RKIAEDLGLVTAKKKDSTGICFIGERKFREFLGRYLPA--QPGKIITVDGDEIGEHQGLM 236 R A GL A+K +S +CFI ++ F+ +PG I+ DG +G H G+ Sbjct: 197 RAEAIARGLPGAEKGESQELCFIPSGRYAPFVADRAADRLRPGPIVDRDGRVVGSHGGVH 256 Query: 237 YHTLGQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLHWVD 296 T+GQRKG+G+ + P +VV D + + + + L + G W D Sbjct: 257 GFTVGQRKGIGVSLGR-----PAFVVGLDAASGAVHLG---DEGDLYAAGAEIADAVWCD 308 Query: 297 REPFTGTMRCTVKTRYRQTDIPCTVKA-----LDDDRIEVIFDEPVAAVTPGQSAVFYNG 351 F + V+ R R P ++ + F PV +V+PGQ AV Y G Sbjct: 309 DAVF--PLEAEVRVRARHEAAPGIIERRRDPATGAESFVARFASPVRSVSPGQMAVVYRG 366 Query: 352 EVCLGGGIIEQRL 364 + LGGG I+ L Sbjct: 367 DRVLGGGRIKAAL 379 >UniRef50_B3JKC8 Putative uncharacterized protein n=2 Tax=Bacteroides RepID=B3JKC8_9BACE Length = 353 Score = 359 bits (921), Expect = 1e-97, Method: Composition-based stats. Identities = 129/368 (35%), Positives = 202/368 (54%), Gaps = 20/368 (5%) Query: 2 SETAKKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYCTAAADLADAQAV 61 + KV++GMSGG DSSV+A LLQ GY+V G+ + +E+D+ EY L DA+ + Sbjct: 1 MQENNKVLLGMSGGTDSSVAALLLQDAGYEVTGVTFRFYEKDNNTEY------LDDAREL 54 Query: 62 CDKLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGA 121 C++L I T + E+ + + F+ EY GRTP P LCN +K+ L+ A++ G Sbjct: 55 CERLHISHITYDARNEFRERIISYFINEYMTGRTPVPCTLCNNYLKWP-LLKKLADEKGI 113 Query: 122 DYIATGHYVRRADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQVRKI 181 + ATGHYV++ ++DG + G D +KDQS+FL+ L + + + L P+G+L K +VR+I Sbjct: 114 YHFATGHYVQKRNIDGYWHITTGTDVDKDQSFFLWGLPQDILQRMLLPMGKLTKNKVREI 173 Query: 182 AEDLG-LVTAKKKDSTGICFIGERKFREFLGRYLPAQ---PGKIITVDGDEIGEHQGLMY 237 A + G L A K+DS G+CF +R FL ++ + PG G+ +G+H+G + Sbjct: 174 AAERGFLKAAHKRDSLGVCFCP-MDYRSFLKEHVKKELIMPGNFYDESGNCLGKHEGYPF 232 Query: 238 HTLGQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLHWVDR 297 +T+GQR+GLGI K +V + N ++++ + L + H + Sbjct: 233 YTIGQRRGLGIYLNK-----ALFVKQIIPQTNSIILSD--QLCSLGQTEMYLTDWHVTNP 285 Query: 298 EP-FTGTMRCTVKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTPGQSAVFYNGEVCLG 356 F T VK RYR+ CTV D ++ + EP+ ++ GQ+A FY +V LG Sbjct: 286 SALFETTDEIIVKIRYRKQANRCTVIPTPDGQLHIKLHEPLTSIAAGQAAAFYRDDVVLG 345 Query: 357 GGIIEQRL 364 GGII L Sbjct: 346 GGIICSSL 353 >UniRef50_A8Z5W4 tRNA-specific 2-thiouridylase mnmA n=1 Tax=Candidatus Sulcia muelleri GWSS RepID=MNMA_SULMW Length = 380 Score = 357 bits (917), Expect = 3e-97, Method: Composition-based stats. Identities = 155/391 (39%), Positives = 217/391 (55%), Gaps = 41/391 (10%) Query: 1 MSETAKKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYCTAAADLADAQA 60 M+ K+VIVGMSGGVDSSV+A LL++QGY V G+FMK + + C D DA Sbjct: 1 MNVKRKRVIVGMSGGVDSSVAALLLKKQGYDVIGIFMKYYNFE-----CPWREDSIDAML 55 Query: 61 VCDKLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLG 120 V L I + ++ Y + + + EYK G TPNPDI+CN +IKFK FLE + L Sbjct: 56 VSQSLKIPFYIIDITKNYKNLIIDYLYKEYKKGYTPNPDIICNSKIKFKFFLEKSI-FLK 114 Query: 121 ADYIATGHYVRRADVDG----KSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKP 176 +D+IATGHYVR+ +++ +++ G+DSNKDQSYFL L+ QI +S+FP+G L K Sbjct: 115 SDFIATGHYVRKKEINENGKISYKIISGIDSNKDQSYFLCKLNKVQIKKSIFPLGWLNKK 174 Query: 177 QVRKIAEDLGLVTAKKKDSTGICFIGERKFREFLGRYLPAQPGKIITVD----------- 225 +VR+IA L+ A KKDS GICFIG+ KF FL + L + G II ++ Sbjct: 175 EVREIANKYNLINANKKDSQGICFIGKIKFLNFLKKKLAEKKGIIIEINKNSHIFKYKQK 234 Query: 226 -------------GDEIGEHQGLMYHTLGQRKGLGIGGTKEGTEEPWYVVDKDVENNILV 272 G IG H G Y T GQRKGL IG G + P +V++KD+ NIL Sbjct: 235 KLFSKKIEYKKEYGKIIGHHIGAHYFTKGQRKGLKIG----GYKYPLFVIEKDITKNILY 290 Query: 273 VAQGHEHPRLMSVGLIAQ--QLHWVDREPFTGTMRCTVKTRYRQTDIPCTVKALDDDRIE 330 V G HP L + + + +HW++++ + + RYRQ T+ ++D + Sbjct: 291 VGMGKNHPGLYTKVICIKKYNIHWINKKKIKTKIEVECRIRYRQNFKKATLYKKNND-LY 349 Query: 331 VIFDEPVAAVTPGQSAVFYNGEVCLGGGIIE 361 V F+ P AV GQ V+Y +G G+I Sbjct: 350 VEFEIPQLAVNGGQFIVWYINNEVIGSGLIS 380 >UniRef50_Q0ARV1 tRNA-specific 2-thiouridylase mnmA n=67 Tax=Alphaproteobacteria RepID=MNMA_MARMM Length = 405 Score = 357 bits (916), Expect = 4e-97, Method: Composition-based stats. Identities = 127/362 (35%), Positives = 194/362 (53%), Gaps = 18/362 (4%) Query: 7 KVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDG---EEYCTAAADLADAQAVCD 63 +V+V MSGGVDSSV+A LL GY V G+ ++ ++ + C A D+ DA+ V + Sbjct: 37 RVVVAMSGGVDSSVTAALLHHLGYDVVGVTLQLYDHGAAMAKKGACCAGQDIYDAKRVAE 96 Query: 64 KLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGADY 123 G + +++ + + + V E F Y AG TP P + CN+ +KF L A LGA Sbjct: 97 ACGFRHYVLDYESRFREAVIEEFADTYLAGFTPIPCVRCNQTVKFADLL-TTARQLGAVC 155 Query: 124 IATGHYVRRADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQVRKIAE 183 +ATGHY++R D + L R D+ KDQSYFL+ +H+Q+ FP+G L K Q R++AE Sbjct: 156 MATGHYIQRVDGPNGAELRRAADAGKDQSYFLFATTHDQLDFLRFPLGHLNKDQTRELAE 215 Query: 184 DLGLVTAKKKDSTGICFIGERKFREFLGRYLP--AQPGKIITVDGDEIGEHQGLMYHTLG 241 GL+ A K DS ICF+ ++ + + + P ++PG+I+ VDG +G H+G++ +T+G Sbjct: 216 AFGLIVADKPDSQDICFVPNGRYVDIVEKVRPGASRPGEIVHVDGRVLGTHEGVIRYTVG 275 Query: 242 QRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLHWVDREPFT 301 QR+GL I +P YVV D +VV L + + ++W+ E Sbjct: 276 QRRGLKI-----AVGDPLYVVRLDAAKAEVVVGPRE---ALEIDTIALKDINWLGDEAPL 327 Query: 302 GTMRCTVKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTPGQSAVFY---NGEVCLGGG 358 VK R + +P + +D D I V+ V PGQ+ VFY + + LGGG Sbjct: 328 DGAPVRVKVRSTRPPVPAALS-VDGDDIRVVLARGEEGVAPGQACVFYSSDDEDRVLGGG 386 Query: 359 II 360 I Sbjct: 387 WI 388 >UniRef50_C4QX90 tRNA-specific 2-thiouridylase, responsible for 2-thiolation of the wobble base of mitochondrial tRNA n=1 Tax=Pichia pastoris GS115 RepID=C4QX90_PICPG Length = 398 Score = 357 bits (916), Expect = 4e-97, Method: Composition-based stats. Identities = 122/381 (32%), Positives = 191/381 (50%), Gaps = 27/381 (7%) Query: 4 TAKKVIVGMSGGVDSSVSAWLLQQQ--GYQVEGLFMKNWEEDDGEEYCTAAADLADAQAV 61 +++V MS GVDSSV+A L ++ +VEG+FM NW D +D D + Sbjct: 22 EKDRIVVAMSSGVDSSVTAALCRKIFPRSEVEGIFMANWTSDSN----CTDSDWNDVKKT 77 Query: 62 CDKLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGA 121 C +GI V+F EYW VFE L +Y+ G+TPNPD+ CN+ +KF +E LG Sbjct: 78 CSHIGIPCRRVDFEKEYWTEVFEPMLEQYRIGKTPNPDVGCNRYVKFGKMIEHLTNTLGE 137 Query: 122 D---YIATGHYVRRAD--VDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKP 176 ++ TGHY R + + LLR KDQSY+L + + + P+G KP Sbjct: 138 QQPWWLVTGHYARVLEDITSREKHLLRSDYLPKDQSYYLSRVKDSSLERMFLPIGHFSKP 197 Query: 177 QVRKIAEDLGLVTAKKKDSTGICFIG--ERKFREFLGRYLPAQPGKIITVDGD----EIG 230 ++R +A+ L T+ K DS G+CF+ E F++FL +LP +PG IIT+D + + G Sbjct: 198 EIRNLAKKWKLPTSSKPDSQGLCFVSQKEGHFKKFLDEFLPPEPGDIITIDENGFKHKWG 257 Query: 231 EHQGLMYHTLGQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQ 290 HQGL + T+GQR G+ + + W+V +K + N +V+ +G +P L + Sbjct: 258 SHQGLWHATIGQRSGVSMPQGDRNYKGAWFVSEKRPKTNEIVIVKGSNNPALYKDTVETS 317 Query: 291 QLHWVDREPFTGTM-----RCTVKTRYRQTDI-----PCTVKALDDDRIEVIFDEPVAAV 340 W+ V+ R Q I +++++ R+ + A+ Sbjct: 318 NWLWLGPFNADNLKNISINELIVQYRSLQDPIGLLNWKFFSQSINNQRMTFRLKQKYRAI 377 Query: 341 TPGQSAVFYNGEVCLGGGIIE 361 +PGQ AV Y+ + LG G+I Sbjct: 378 SPGQIAVLYHRDRVLGCGMIT 398 >UniRef50_A6LIF1 tRNA-specific 2-thiouridylase mnmA n=28 Tax=Bacteroidales RepID=MNMA_PARD8 Length = 358 Score = 356 bits (914), Expect = 7e-97, Method: Composition-based stats. Identities = 133/360 (36%), Positives = 196/360 (54%), Gaps = 16/360 (4%) Query: 8 VIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEED-DGEEYCTAAADLADAQAVCDKLG 66 + +SGGVDSSV L++ GY +++ ED DG C A D+ + K G Sbjct: 3 IAALVSGGVDSSVVVHQLKEAGYDPTIFYIRIGMEDKDGYIDCPAEEDIEITSYIARKYG 62 Query: 67 IELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGADYIAT 126 V+ EYWD V + K G TPNPD++CNK IKF F E +D D IAT Sbjct: 63 CRFEIVSLHDEYWDRVVSYTIESVKRGLTPNPDMMCNKYIKFGCFEEKWGKD--FDKIAT 120 Query: 127 GHYVRRADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQVRKIAEDLG 186 GHY ++DGK+ L D KDQ+ FL ++ QI + +FP+G L K +VR IAE Sbjct: 121 GHYATTTEIDGKTWLSTAKDPVKDQTDFLGQITRLQIQKLMFPIGHLMKSEVRAIAEAQK 180 Query: 187 LVTAKKKDSTGICFIGERKFREFLGRYLPAQPGKIITVD-GDEIGEHQGLMYHTLGQRKG 245 L +AK+KDS GICF+G+ + +F+ RYL +PGKI+ ++ G +G+H G +HT+GQRKG Sbjct: 181 LPSAKRKDSQGICFLGKINYNDFIERYLGKRPGKIVELETGKVLGKHNGYWFHTIGQRKG 240 Query: 246 LGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLHWVDREP---FTG 302 LG+ + PW+V+ KD++ NI+ V+ G++ + Q ++ +P F G Sbjct: 241 LGL------SGGPWFVIQKDIKRNIIYVSNGYDPETQYGKVINMQGFDFITEDPWGEFEG 294 Query: 303 TMRCTVKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTPGQSAVFYNGEV--CLGGGII 360 T K R+ ++ + D V DE + + PGQ +V Y+ + CLG G+I Sbjct: 295 EKEITFKIRHTPEFTHGYIRRIG-DLYRVESDEKIQGIAPGQYSVIYDKDHHLCLGSGMI 353 >UniRef50_D2V0M5 Predicted protein n=1 Tax=Naegleria gruberi RepID=D2V0M5_NAEGR Length = 408 Score = 356 bits (914), Expect = 7e-97, Method: Composition-based stats. Identities = 148/384 (38%), Positives = 213/384 (55%), Gaps = 37/384 (9%) Query: 5 AKKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGE---EYCTAAADLADAQAV 61 +++VGMSGGVDSS++A LL++ G+ V L M+NW+ + + E+CT D D + + Sbjct: 31 QIRIVVGMSGGVDSSLTACLLKEFGFDVVSLHMRNWDSSEEDPSREHCTFTKDWNDVKVI 90 Query: 62 CDKLGIEL-----HTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAA 116 C+ GI+ H V F +YW++VFE L Y G+TPNPD+ CNK IKF A L +A Sbjct: 91 CETFGIKHVGSSFHPVEFIDQYWNDVFEKLLDGYSIGQTPNPDLFCNKFIKFDAMLNYAI 150 Query: 117 EDLGADYIATGHYVR----RADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGE 172 E GADYIATGHY + + LLR +D +KDQSYFL ++ + +SLFP+G+ Sbjct: 151 EKGGADYIATGHYAQLGYSDNGETSNTHLLRAIDHSKDQSYFLSFVNKKAFEKSLFPLGQ 210 Query: 173 -LEKPQVRKIAEDL-GLVT--AKKKDSTGICFIGERKFREFLGRYLPAQPGKII--TVDG 226 L+K +VR +A D +KDS GICFIG+RKF++FL +Y+ + G I+ Sbjct: 211 FLKKEEVRVLARDHFKFPNELWGRKDSVGICFIGKRKFKDFLSKYIDSSKGNIVSIEDKT 270 Query: 227 DEIGEHQGLMYHTLGQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVG 286 +GEH G ++T+GQ G G +E W+V +KD +NNIL V G+ HP L+ Sbjct: 271 TILGEHDGASFYTIGQ------GMCLSGMKEKWFVCEKDFKNNILYVCPGNNHPSLLKSS 324 Query: 287 LIAQQLHWVDREPFTGTMRCTVKTRYRQ-TDIPCTVKALDDDRI-EVIF---DEPVAAVT 341 HW+ E + VK RY Q C V +D + ++ +EP + Sbjct: 325 FTISNCHWL--ENIDNSKEYFVKVRYNQREPFRCKVSYSNDSSLCDITLADSEEPARGIA 382 Query: 342 PGQSAVFYNGE------VCLGGGI 359 GQ AV Y+ +C+GGGI Sbjct: 383 SGQIAVLYDSNSQFSEQICVGGGI 406 >UniRef50_Q5LIS5 tRNA-specific 2-thiouridylase mnmA 1 n=5 Tax=Bacteroides RepID=MNMA1_BACFN Length = 364 Score = 356 bits (914), Expect = 7e-97, Method: Composition-based stats. Identities = 126/375 (33%), Positives = 196/375 (52%), Gaps = 30/375 (8%) Query: 1 MSETAKKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYCTAAADLADAQA 60 M E K+V++GMSGG DSSV+A LL + GY+V G+ + +E + EY L DA+A Sbjct: 1 MMEKNKRVLLGMSGGTDSSVAAMLLLEAGYEVTGVTFRFYEFNGSTEY------LEDARA 54 Query: 61 VCDKLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLG 120 + +LGI T + + + + + F+ EY +G TP P LCN ++K+ L A+++G Sbjct: 55 LAARLGIGHITYDARKVFQEQIIDYFIDEYMSGHTPVPCTLCNNQLKWP-LLAKIADEMG 113 Query: 121 ADYIATGHYVRRADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQVRK 180 Y+ATGHYVR+ +DG + D +KDQS+FL+ L E + + L P+G + K + R Sbjct: 114 IFYLATGHYVRKQWIDGNYYIAPAEDVDKDQSFFLWGLRQEILQRMLLPMGGMTKSEARA 173 Query: 181 IAEDLGLV-TAKKKDSTGICFIGERKFREFLGR-------------YLPAQPGKIITVDG 226 A G +KKKDS G+CF +R FL + Y + G+ + G Sbjct: 174 YAAGRGFEKVSKKKDSIGVCFCP-LDYRSFLKKCLCDESGDKNRNIYRKVERGRFLDESG 232 Query: 227 DEIGEHQGLMYHTLGQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVG 286 + I H+G ++T+GQR+GLGI + +V + E N +V+A L Sbjct: 233 NFIAWHEGYPFYTIGQRRGLGIQLNR-----AVFVKEIHPETNEVVLAS---LKSLEKSE 284 Query: 287 LIAQQLHWVDREPFTGTMRCTVKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTPGQSA 346 + + + VD G VK RYR+ + C+V + + + EP++A+ GQ+A Sbjct: 285 MWLKDWNIVDESRLLGCDDVIVKIRYRKQENHCSVTITPEGLLHIRLHEPLSAIAEGQAA 344 Query: 347 VFYNGEVCLGGGIIE 361 FY + LGGGII Sbjct: 345 AFYKDGLLLGGGIIT 359 >UniRef50_A4SBE4 Predicted protein n=2 Tax=Ostreococcus RepID=A4SBE4_OSTLU Length = 389 Score = 355 bits (912), Expect = 1e-96, Method: Composition-based stats. Identities = 144/370 (38%), Positives = 204/370 (55%), Gaps = 21/370 (5%) Query: 9 IVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWE--EDDGEEYCTAAADLADAQAVCDKLG 66 +VG+SGGVDS+V+AW L++ G + M+NW+ ++D C+ DL A+A+ +KL Sbjct: 17 VVGLSGGVDSAVAAWALERCGARATATLMRNWDARDEDAATDCSHRDDLKSARAIAEKLN 76 Query: 67 IELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGADYIAT 126 + +F EYW VFE ++ +++G TPNPD+ CN+ +KF A L A EDLG Y+AT Sbjct: 77 LRFIESDFTREYWHEVFEPYVEAFESGATPNPDLECNRRVKFGALLRRAMEDLGGRYLAT 136 Query: 127 GHY---VRRADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQVRKIAE 183 GHY R D RLLRG+D KDQSYFL ++ E + + FP+G + K + R+ A Sbjct: 137 GHYARIDRDVDEGAPPRLLRGIDQTKDQSYFLASVRGEALRSACFPLGAVFKSETREAAR 196 Query: 184 DLGLVTAKKKDSTGICFIGERKFREFLGRYLPAQPGKIITVDGDE----IGEHQGLMYHT 239 LG A ++ S GICFIG R F EF+G Y+ G + + H+GL +T Sbjct: 197 ILGFDCADRRSSAGICFIGRRPFGEFIGEYITPSEGAFVDAETARPVPGAAPHRGLASYT 256 Query: 240 LGQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLHWVDREP 299 +GQR +G G +PW+VV K+V N++ VA+G EH L S W+ Sbjct: 257 VGQRAKIG------GAPKPWFVVGKNVAANVVYVAKGAEHDALYSTRAALADEFWISNRR 310 Query: 300 FTGT-----MRCTVKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTPGQSAVFYNGEVC 354 T +R KTRY V ++ + FD P AVTPGQ+ V Y+G+VC Sbjct: 311 PTSDDGSSSVRLLAKTRYAS-FSSSFVPRVESSPLRATFDRPERAVTPGQALVLYDGDVC 369 Query: 355 LGGGIIEQRL 364 LGGG+IE Sbjct: 370 LGGGVIEHVG 379 >UniRef50_UPI000069DE11 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase (EC 2.1.1.61) (Mitochondrial tRNA-specific 2-thiouridylase 1) (MTO2 homolog). n=6 Tax=Euteleostomi RepID=UPI000069DE11 Length = 372 Score = 355 bits (912), Expect = 1e-96, Method: Composition-based stats. Identities = 145/355 (40%), Positives = 197/355 (55%), Gaps = 37/355 (10%) Query: 2 SETAKKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYCTAAADLADAQAV 61 +T ++V+ MSGGVDSSV+A LL+++GY+V G+FM NW+ D C+A D DA V Sbjct: 1 MQTVRRVVCAMSGGVDSSVAALLLRRRGYEVTGVFMNNWDAVDEHGVCSAERDCEDAYRV 60 Query: 62 CDKLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGA 121 C KL I H V++ EYW VF FL EY+ GRTPNPDILCNK IKF FL +A + LGA Sbjct: 61 CKKLDIPFHQVSYVKEYWHEVFSYFLNEYEKGRTPNPDILCNKHIKFNHFLSYAIDILGA 120 Query: 122 DYIATGHYVRRADVDGKSR-----------------------LLRGLDSNKDQSYFLYTL 158 D IATGHY R + D + LL+ D KDQ++FL + Sbjct: 121 DAIATGHYARTSLEDEEIFQQKYIKSPQNLFRNRFEIRHDAKLLQAADRIKDQTFFLSQI 180 Query: 159 SHEQIAQSLFPVGELEKPQVRKIAEDLGL-VTAKKKDSTGICFIGERKFREFLGRYLPAQ 217 S + +++FP+GEL K V+KIA + G K+K+S GICFIGER F F+ YL AQ Sbjct: 181 SQYALRKTIFPLGELTKDFVKKIAAEAGFHHVLKRKESMGICFIGERNFENFILEYLEAQ 240 Query: 218 PGKIIT-VDGDEIGEHQGLMYHTLGQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQG 276 PG ++ DG +G H+G TLGQR +G G + W+VVDKDV + VA Sbjct: 241 PGNFVSAEDGKIMGRHKGWFLFTLGQRARIG------GQRDAWFVVDKDVTTGNVYVAPT 294 Query: 277 HEHPRLMSVGLIAQQLHWVDREPFTG-----TMRCTVKTRYRQTDIPCTVKALDD 326 +HP L L ++HW+ +P M C + +++ + C+V Sbjct: 295 TDHPALYRDLLRTDRMHWLSEDPPDELVKNKMMECHFRFQHQMALV-CSVLQSGQ 348 >UniRef50_C7MLV9 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase n=1 Tax=Cryptobacterium curtum DSM 15641 RepID=C7MLV9_CRYCD Length = 394 Score = 355 bits (912), Expect = 1e-96, Method: Composition-based stats. Identities = 155/356 (43%), Positives = 208/356 (58%), Gaps = 12/356 (3%) Query: 7 KVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYCTAAADLADAQAVCDKLG 66 +V+VG+SGGVDSSV A LL + G+ V G +MKNW D C A DLADA+ V +LG Sbjct: 50 RVLVGLSGGVDSSVCAALLVETGWDVCGAYMKNWTMDVPGMRCPWADDLADAKRVAVRLG 109 Query: 67 IELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGADYIAT 126 I+ +F Y V + + EY+AGRTPNPD++CN+++KF F + AA+D G DYIAT Sbjct: 110 IDFRVYDFQEAYKREVVDYLVDEYRAGRTPNPDVMCNQQVKFGLFFD-AAQDDGFDYIAT 168 Query: 127 GHYVRRADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQVRKIAEDLG 186 GHY R + RLLR D++KDQ+YFLY +S + +A ++FP+G L K QVR AE Sbjct: 169 GHYARASH--DPVRLLRAADTHKDQTYFLYRMSSDAVAHTIFPLGGLLKTQVRAAAEQRN 226 Query: 187 LVTAKKKDSTGICFIGERKFREFLGRYLPAQPGKIITVD-GDEIGEHQGLMYHTLGQRKG 245 L TA K DS GICF+GE +FL Y+ QPG II D G+ +G H G ++ T+GQR G Sbjct: 227 LSTAHKADSQGICFVGEAGICDFLSLYVHPQPGPIIDDDTGETVGYHDGAIFFTIGQRHG 286 Query: 246 LGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLHWVDREPFTGTMR 305 LGIGG + + VV KD+++NIL V G P S+ L ++ W+ P Sbjct: 287 LGIGGGRR-----YRVVRKDMDHNILYVHDGPLAPVQDSL-LELDRVRWIADVPPQEGA- 339 Query: 306 CTVKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTPGQSAVFYNGEVCLGGGIIE 361 C V+T + + V + AV GQS V Y G+ CLGGGI+ Sbjct: 340 CEVRT-HHGEKLLAATLLATATTATVQLEADHDAVASGQSVVIYRGQECLGGGIVR 394 >UniRef50_Q1AWB1 tRNA-specific 2-thiouridylase mnmA n=1 Tax=Rubrobacter xylanophilus DSM 9941 RepID=MNMA_RUBXD Length = 488 Score = 354 bits (910), Expect = 2e-96, Method: Composition-based stats. Identities = 124/357 (34%), Positives = 188/357 (52%), Gaps = 19/357 (5%) Query: 8 VIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYCTAAADLADAQAVCDKLGI 67 V+ MSGGVDS+V+A LL+++GY+V + + + + G C + + A+ LGI Sbjct: 146 VVAAMSGGVDSAVTALLLKERGYEVVAVTFRLHDGEPGSRSCCSPDTVLFARETAHGLGI 205 Query: 68 ELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGADYIATG 127 T+N + V F+ Y AGRTPNP + CN +KF A F A+ LG ++ATG Sbjct: 206 PHFTLNLRELFDRRVMRDFVGSYAAGRTPNPCVACNAHVKFHA-AAFLADRLGLRHVATG 264 Query: 128 HYVRRADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQVRKIAEDLGL 187 HY R + L R D KDQ+Y L+ + + +++FP+G+ K +VR+IAE+ GL Sbjct: 265 HYARVGE---GPCLERPEDGRKDQTYVLWPVPPRLLGRTIFPLGDYRKSEVRRIAEERGL 321 Query: 188 VTAKKKDSTGICFIGERKFREFLGRYLPAQPGKIITVDGDEIGEHQGLMYHTLGQRKGLG 247 A+ +S ICFI + +R F+ R + ++PG+I+ G +G H G++ T+GQR+GLG Sbjct: 322 AVARTPESQDICFIPDGDYRSFVRRRVRSEPGEIVDRQGRVLGRHAGVVDFTVGQRRGLG 381 Query: 248 IGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLHWVDREPFTGTMRCT 307 I P YV + + +VV E L ++ + +W Sbjct: 382 IS-----APTPLYVTEVRPRSRQVVVGSRRE---LEVRRMLVRGANWFLDPREA----AL 429 Query: 308 VKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTPGQSAVFY--NGEVCLGGGIIEQ 362 V+ RY +PC ++ EV EPV V PGQSAVFY +G +GGGII + Sbjct: 430 VQVRYNGEPVPCELEE-GAGGWEVALLEPVFGVAPGQSAVFYTRDGAKVVGGGIIAR 485 >UniRef50_Q8R5X3 tRNA-specific 2-thiouridylase mnmA 1 n=16 Tax=Fusobacterium RepID=MNMA1_FUSNN Length = 362 Score = 354 bits (910), Expect = 2e-96, Method: Composition-based stats. Identities = 143/368 (38%), Positives = 213/368 (57%), Gaps = 32/368 (8%) Query: 2 SETAKKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYCTAAADLADAQAV 61 + + +V V MSGGVDSS A+LL+QQGY + G+ MK ++++D DA+ V Sbjct: 20 NNSNIRVGVAMSGGVDSSTVAYLLKQQGYDIFGVTMKTFKDEDS-----------DAKKV 68 Query: 62 CDKLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGA 121 CD LGIE + ++ E+ + V + F+ EY GRTPNP ++CN+ IKF L+F A Sbjct: 69 CDDLGIEHYILDVRDEFKEKVVDYFVNEYMNGRTPNPCMVCNRYIKFGKMLDFILSK-DA 127 Query: 122 DYIATGHYVRRADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQVRKI 181 ++ATGHY + + L G DSNKDQ YFL + ++++ +FPVG+LEK ++R++ Sbjct: 128 SFMATGHYTKLKNG----LLSVGDDSNKDQVYFLSQIEKNKLSKIIFPVGDLEKTKLREL 183 Query: 182 AEDLGLVTAKKKDSTGICFIGERKFREFL---GRYLPAQPGKIITVDGDEIGEHQGLMYH 238 AE LG+ KKDS ICF+ + K ++FL + +PG I+ +G+ +G+H+G ++ Sbjct: 184 AEQLGVRVYSKKDSQEICFVDDGKLKQFLIENTKGKAEKPGNIVDKNGNILGKHKGFSFY 243 Query: 239 TLGQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLHW--VD 296 T+GQRKGLGI +EEP YV+ D + N ++V Q + L LIA +L+ V Sbjct: 244 TIGQRKGLGIS-----SEEPLYVLAFDRKTNNIIVGQNED---LFRDELIATRLNLFSVS 295 Query: 297 REPFTGTMRCTVKTRYRQTDIPCTVKALDDDRIEVIF-DEPVAAVTPGQSAVFYNGE-VC 354 + C KTR R C +K D+ +V F D V A+TPGQ VFYN + Sbjct: 296 SLEGLDNLECFAKTRSRDILHKCLLKKDGDN-FQVKFIDNKVRAITPGQGIVFYNNDGNV 354 Query: 355 LGGGIIEQ 362 + GG IE+ Sbjct: 355 IAGGFIEK 362 >UniRef50_B8CCP6 tRNA-methyltransferase (Fragment) n=1 Tax=Thalassiosira pseudonana RepID=B8CCP6_THAPS Length = 392 Score = 354 bits (909), Expect = 3e-96, Method: Composition-based stats. Identities = 135/386 (34%), Positives = 205/386 (53%), Gaps = 24/386 (6%) Query: 2 SETAKKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDD--GEEYCTAAADLADAQ 59 + V + +SGGVDSSV+ LL +Q Y V +++ W ED+ C DL Q Sbjct: 7 TTRKPTVAMLLSGGVDSSVAMHLLLRQNYNVTAFYLRIWLEDELSHLGECPWEDDLQVCQ 66 Query: 60 AVCDKLG-IELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAED 118 +VC+ G + L TV+ EY + V + + E + GRTPNPDI+CN +KF FLE+ E Sbjct: 67 SVCEHAGNVSLETVSLGKEYRERVVQYTIEEAQRGRTPNPDIMCNSRVKFGCFLEYIEES 126 Query: 119 -LGADYIATGHYVRRADVDGK-----SRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGE 172 + DY+A+GHY + D D RL R D KDQSYFL L+ +Q+++ +FP+GE Sbjct: 127 GMDFDYVASGHYAQLKDDDDTSSISQKRLFRAPDPVKDQSYFLCALTQKQLSKVIFPIGE 186 Query: 173 LEKPQVRKIAEDLGLVTAKKKDSTGICFIGERKFREFLGRYLPAQPGKIITV-DGDEIGE 231 +K +VR++A L + DS G+CF+G+ +F +FL YL +PG ++ +GD IG Sbjct: 187 YQKSEVRELATQFQLPNRNRPDSQGLCFLGKVRFDDFLASYLGDRPGDVVDALNGDVIGR 246 Query: 232 HQGLMYHTLGQRKGLG-IGGTKEGTEEPWYVVDKDVENNILVVAQGHEHP--RLMSVGLI 288 H GL YHT+GQRKG+G + + PWYVV KD E +I+ V+ ++ Sbjct: 247 HNGLWYHTVGQRKGIGKVMFPLATAKGPWYVVAKDQERDIVYVSNRYDEDDFAQARSEFE 306 Query: 289 AQQLHWVDREPFTG--------TMRCTVKTRYRQTDIPCTVKALDDDRI-EVIFDEPVAA 339 + + W+ E +R +K R+ + T+ DD + + D+ Sbjct: 307 VEDVRWLAGEAPMNAHHEKSWHEVRLDMKIRHGPRVVQGTLMLKDDGSVGNIRLDQKDGG 366 Query: 340 VTPGQSAVFYNGE--VCLGGGIIEQR 363 + PGQ VFY + CLG +I ++ Sbjct: 367 LAPGQYVVFYQPDTLECLGAAVISEK 392 >UniRef50_A5IJQ4 tRNA-specific 2-thiouridylase mnmA n=7 Tax=Thermotogaceae RepID=MNMA_THEP1 Length = 358 Score = 354 bits (908), Expect = 4e-96, Method: Composition-based stats. Identities = 128/367 (34%), Positives = 200/367 (54%), Gaps = 20/367 (5%) Query: 7 KVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEE------YCTAAADLADAQA 60 KV V +SGGVDS+V+ +LL ++G++V+ MK E++ C + +D ADA Sbjct: 2 KVGVALSGGVDSAVALYLLLKEGHEVKAFHMKTKEDEFFIRKEIKKKVCCSPSDTADAMR 61 Query: 61 VCDKLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLG 120 + LG+E+ V+ + + V E F ++ G TPNP + CN+ +KF +++ G Sbjct: 62 IAHFLGVEIEIVDVKEIFREKVIEPFKSDLLKGLTPNPCVHCNRFVKFGYLMDYVLNQ-G 120 Query: 121 ADYIATGHYVRRADVD--GKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQV 178 D A+GHY R + G+ + +G+D KDQSYFL + +I + +FP G K ++ Sbjct: 121 FDAFASGHYARIEFSEKYGRKVIKKGVDLKKDQSYFLARIEPWRIERLIFPNGIYTKEEI 180 Query: 179 RKIAEDLGLVTAKKKDSTGICFIGERKFREFLGRY-LPAQPGKIITVDGDEIGEHQGLMY 237 RKIAE+ G+ AKK++S +CFI + FL + + G +IT +G+ +G H G Sbjct: 181 RKIAEEAGIHVAKKQESQDVCFIPDGSIENFLKDEGITLKEGDLITPEGEVVGRHFGYPL 240 Query: 238 HTLGQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLHWVDR 297 +T+GQRKG I E +YV K E N++VV + + GLIA+ W Sbjct: 241 YTIGQRKGFKI----EKFGRRYYVRGKIPEKNVVVV---SDLEDVFFSGLIAEDPVWHVE 293 Query: 298 EPFTGTMRCTVKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTPGQSAVFYNGEVCLGG 357 P +C + R + + P VK D + +EV F++ V AVTPGQ A FY+G+ LGG Sbjct: 294 VP--EEFKCVCRVRKKSEEAPAVVKLRD-NEVEVRFEKKVFAVTPGQIAAFYDGDTLLGG 350 Query: 358 GIIEQRL 364 II++ + Sbjct: 351 AIIKEGI 357 >UniRef50_A9BIS3 tRNA-specific 2-thiouridylase mnmA n=1 Tax=Petrotoga mobilis SJ95 RepID=MNMA_PETMO Length = 367 Score = 351 bits (901), Expect = 3e-95, Method: Composition-based stats. Identities = 125/368 (33%), Positives = 199/368 (54%), Gaps = 21/368 (5%) Query: 4 TAKKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEE------DDGEEYCTAAADLAD 57 + KKV++ MSGGVDSSV+A+LL++Q Y V GL K + + ++ C + +D D Sbjct: 2 SNKKVLMLMSGGVDSSVAAYLLKEQNYHVIGLHFKTVSDVVFSLIPEKKKVCCSPSDTQD 61 Query: 58 AQAVCDKLGIE-LHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAA 116 A + DKL ++ V+ E+ + + + F+ YK G+TPNP +LCN+ KF LE A Sbjct: 62 ALKIADKLDLDDFQIVDIKKEFKEKIIDYFIKTYKEGKTPNPCMLCNRFFKFGKALE-IA 120 Query: 117 EDLGADYIATGHYVRRADVDG--KSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELE 174 GAD++++GHY+ + + + +G+D KDQSYFL + + + FP+G + Sbjct: 121 HSYGADWVSSGHYLIKEYSNKYSTYIIKKGVDQYKDQSYFLSYIDKNTLPKLHFPLGNMY 180 Query: 175 KPQVRKIAEDLGLVTAKKKDSTGICFIGERKFREFLGRY-LPAQPGKIITVDGDEIGEHQ 233 K ++R IA +GL A K DS +CFI + +R FL + + GK+ ++G+EIG H Sbjct: 181 KVEIRDIANKIGLSVANKPDSQELCFIPDNDYRRFLKENGVTTEEGKVYDLEGNEIGTHT 240 Query: 234 GLMYHTLGQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLH 293 G M +T+GQR G+ + +V + N+L+VA E + S LI Q ++ Sbjct: 241 GYMNYTIGQRSGISY---YKNANVKLHVYKIFPQKNVLIVAPTEE---MYSKELIVQNVN 294 Query: 294 WVDREPFTGTMRCTVKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTPGQSAVFYNG-E 352 + + + R + + P VK + D ++V F EP+ AVTPGQ A Y+ Sbjct: 295 FFVD---FKEIEGFCRVRKKSEEKPAVVKKIADHTLKVSFKEPIFAVTPGQFATIYDESG 351 Query: 353 VCLGGGII 360 V L G+I Sbjct: 352 VVLASGVI 359 >UniRef50_C4F7E5 Putative uncharacterized protein n=2 Tax=Collinsella RepID=C4F7E5_9ACTN Length = 409 Score = 350 bits (899), Expect = 4e-95, Method: Composition-based stats. Identities = 136/417 (32%), Positives = 197/417 (47%), Gaps = 66/417 (15%) Query: 4 TAKKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYCTAAADLADAQAVCD 63 T K+V+V MSGGVDSSV+A+LL QQGY G M D C + +D DA A+C Sbjct: 2 TRKRVLVAMSGGVDSSVTAYLLTQQGYDCLGATM-LLHGDAAPGACGSGSDADDAAAICA 60 Query: 64 KLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGADY 123 +LG ++ + +V E F+ Y+ GRTPNP I CN+ +KF A L +A + D+ Sbjct: 61 RLGFPHEVIDMRETFERHVVEKFVRTYETGRTPNPCIDCNRHLKFDALLSYA-REHDCDF 119 Query: 124 IATGHY---------------------------VRRADVDGKSRLLRGLDSNKDQSYFLY 156 IATGHY R + L LD +KDQSY LY Sbjct: 120 IATGHYGRIGTLAEGGGGSVRRGEEQEFVARITARTGASNAVHTLSCALDPSKDQSYVLY 179 Query: 157 TLSHEQIAQSLFPVGELEKP-QVRKIAEDLGLVTAKKKDSTGICFIGERKFREFLGRYL- 214 +L+ E++A++L P+G L K VR+IA + G A K+DS GICF+ + F ++ + Sbjct: 180 SLTQERLARTLLPLGGLFKERDVRRIAREQGFENAGKRDSQGICFVPDNDFATYIEKRNG 239 Query: 215 -PAQPGKIITVDGDEIGEHQGLMYHTLGQRKGLGIGGTKEGTEEPWYVVDKDVENNILVV 273 P G I+ G +G H G + +T+GQRKGLG+ P YV D N + + Sbjct: 240 APLPEGDIVNTSGHVLGRHHGAIRYTVGQRKGLGVACAH-----PVYVTGIDAVANTVTL 294 Query: 274 AQGHEHPRLMSVGLIAQQLHW---------VDREPFTGTMRCTVKTRYRQTDIPCTVKAL 324 + + LM+ GL+A W + E + + K RYR P ++ Sbjct: 295 GEVAD---LMASGLVADDWIWSAPANVMEELLDEAGETGLPVSAKIRYRHPAQPARLRRA 351 Query: 325 DDDR-----------------IEVIFDEPVAAVTPGQSAVFYNGEVCLGGGIIEQRL 364 E+IFD P + PGQ+ V Y G++ LGGG + + + Sbjct: 352 TCGTTGSSAGANAIAENAANAFELIFDSPERGIAPGQAVVAYAGDIVLGGGTVVRAI 408 >UniRef50_D1PXB9 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase n=1 Tax=Prevotella bergensis DSM 17361 RepID=D1PXB9_9BACT Length = 384 Score = 349 bits (897), Expect = 6e-95, Method: Composition-based stats. Identities = 133/385 (34%), Positives = 197/385 (51%), Gaps = 35/385 (9%) Query: 4 TAKKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYCTAAADLADAQAVCD 63 K++ V +SGGVDSSV + L G + +++ E+ E C + D+ A AV Sbjct: 7 KDKRIAVLLSGGVDSSVVVYELASHGLHPDCFYIRIGPEEKEEWDCNSEEDMEMATAVAK 66 Query: 64 KLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGADY 123 + G +L V+ EYW V + + ++G TPNPD++CN+ IKF AF E A D Sbjct: 67 RFGCKLQVVDCHQEYWSQVTRYTMEKVRSGFTPNPDVMCNRLIKFGAFDEKAG--HDYDL 124 Query: 124 IATGHYVRRADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQVRKIAE 183 IATGHY + +DG+ L D KDQ+ FL + Q+ +++FP+G EK +VR+IAE Sbjct: 125 IATGHYAQTEWIDGRKWLTTSPDPVKDQTDFLAQIEGWQLKKAIFPIGHYEKNEVREIAE 184 Query: 184 DLGLVTAKKKDSTGICFIGERKFREFLGRYLPAQPGKIITVD-GDEIGEHQGLMYHTLGQ 242 L+ A++KDS GICF+G + E++ RYL QPG I+ ++ G +IGEH G +HT+GQ Sbjct: 185 REHLINARRKDSQGICFLGNIDYNEYVRRYLGEQPGDIVELETGTKIGEHSGHWFHTIGQ 244 Query: 243 RKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLHWVDREPFTG 302 RKGLG+ + PW+V+ KDVE+N+L V+ G++ LHW+ EP Sbjct: 245 RKGLGL------SGGPWFVIKKDVEHNVLYVSHGYDPETAYKKDFKIHDLHWLTEEPTPP 298 Query: 303 T--------------MRCTVKTRYRQTDIPCTV----------KALDDDRIEVIFDEPVA 338 + T K R+ P + L D + + + Sbjct: 299 HHLSEASESQKPGSYIPITFKIRHTPEYHPGYLDLNAASSSDHTELTGDTATIHSLDKIH 358 Query: 339 AVTPGQSAVFYNGE--VCLGGGIIE 361 V PGQ V Y+ + C G G I Sbjct: 359 GVAPGQFCVIYDEQHHRCFGSGEIT 383 >UniRef50_C8WLL2 tRNA(5-methylaminomethyl-2-thiouridylate)-methyl transferase n=1 Tax=Eggerthella lenta DSM 2243 RepID=C8WLL2_EGGLE Length = 352 Score = 349 bits (896), Expect = 9e-95, Method: Composition-based stats. Identities = 143/367 (38%), Positives = 200/367 (54%), Gaps = 20/367 (5%) Query: 1 MSETAKKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYCTAAADLADAQA 60 M+ + ++ +GMSGGVDS+VSA LL + GY+V G+ + + E AA A Sbjct: 1 MNASG-RIALGMSGGVDSAVSAALLMRAGYEVVGVTCRFRDNAATERAAADAA------A 53 Query: 61 VCDKLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLG 120 VC +LGI E+ V E F++ Y AG TP+P + CN K A + A +LG Sbjct: 54 VCSQLGIRHEAPGCVGEFERCVVEPFVSSYAAGLTPSPCVGCNARCKMPALV-RVAGELG 112 Query: 121 ADYIATGHYVRRA--DVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQV 178 D IATGHY R A G+ + R LD+ KDQSY L LS EQ+A+ + P+G + K +V Sbjct: 113 CDRIATGHYARIARLSDSGRFVVKRALDARKDQSYMLSLLSQEQLARLVLPLGAMTKAEV 172 Query: 179 RKIAEDLGLVTAKKKDSTGICFIGERKFREFLGRY-LPAQPGKIITVDGDEIGEHQGLMY 237 R IA DLGLV A+K +S CFI E +R FL + PG I+ G+ +G H+GL Sbjct: 173 RVIAADLGLVVAEKAESQDNCFI-EGDYRPFLRARGVEDAPGDIVDRMGNVLGCHEGLAN 231 Query: 238 HTLGQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLHWVDR 297 +T+GQRKG+G+ G EP+YVV+K VE LVV E + ++ ++W Sbjct: 232 YTVGQRKGIGVAG-----PEPYYVVEKRVETRELVVGFADET---LIGSVVVGGMNWQAF 283 Query: 298 EPFTGTMRCTVKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTPGQSAVFYNGEVCLGG 357 E + VK RYR C ++ DD R+ + P PGQ AV Y+G+ LGG Sbjct: 284 ESLGESYGAMVKLRYRSRPCACIIEPEDDQRVSLALRSPQPTTAPGQYAVLYDGDTVLGG 343 Query: 358 GIIEQRL 364 G+IE+ + Sbjct: 344 GMIEEVM 350 >UniRef50_P75365 tRNA-specific 2-thiouridylase mnmA n=2 Tax=Mycoplasma RepID=MNMA_MYCPN Length = 370 Score = 349 bits (895), Expect = 1e-94, Method: Composition-based stats. Identities = 136/375 (36%), Positives = 201/375 (53%), Gaps = 23/375 (6%) Query: 4 TAKKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEE------------DDGEEYCTA 51 K V VG+SGGVDS+VSA LL+QQ +V G+FM+ W+ ++ + C++ Sbjct: 2 QNKTVFVGISGGVDSAVSALLLKQQYREVIGIFMECWDNTLNNDQLGHRAFNEHKSGCSS 61 Query: 52 AADLADAQAVCDKLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAF 111 D +AQA+ LGI+L N YW VF + +K G TPNPD+LCN+ IKF Sbjct: 62 KEDFREAQAIAQLLGIKLIKQNLVEPYWKQVFLPTIDAFKNGLTPNPDMLCNRLIKFGLM 121 Query: 112 LEFAAE-DLGADYIATGHYVRRADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPV 170 ++ + D +D+ ATGHY + + + L D +KDQ+YFL + Q+ +FP+ Sbjct: 122 RDYCKQLDPNSDF-ATGHYAALSWDNNQPLLAIPKDKHKDQTYFLAHVKPAQLQDVVFPL 180 Query: 171 GELEKPQVRKIAEDLGLVTAKKKDSTGICFIGERKFREFLGRYLPAQPGKIITVDG-DEI 229 L K +VR+IA A KKDSTGICFIGER F +FL YLP +PG I ++ Sbjct: 181 AHLLKTEVRQIALAHHFSVATKKDSTGICFIGERHFSDFLKNYLPVKPGVIYDWKTQRQL 240 Query: 230 GEHQGLMYHTLGQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIA 289 G H+G+ ++T GQR GL +GG +VV+KD++ N L V+ + L G+ Sbjct: 241 GSHEGVWFYTTGQRSGLNLGGQAARN----FVVEKDLKTNTLYVS--SDPEDLQRRGITL 294 Query: 290 QQLHWVDREPFTGTMRCTVKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTPGQSAVFY 349 +W+ + T V+ R+ Q + + ++ ++V D+P+ VT GQ V Y Sbjct: 295 SHFNWLYQPNPL-TQTVLVRIRHAQPLVQGHITVQPNNVVQVQLDQPIDRVTNGQYGVLY 353 Query: 350 -NGEVCLGGGIIEQR 363 +CLG GII Sbjct: 354 TQNGICLGSGIITAS 368 >UniRef50_Q6AIZ6 tRNA-specific 2-thiouridylase mnmA n=1 Tax=Desulfotalea psychrophila RepID=MNMA_DESPS Length = 344 Score = 349 bits (895), Expect = 1e-94, Method: Composition-based stats. Identities = 124/353 (35%), Positives = 185/353 (52%), Gaps = 19/353 (5%) Query: 10 VGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYCTAAADLADAQAVCDKLGIEL 69 + MSGGVDS+ +A L +Q+G V G FMK + D + + KL I+L Sbjct: 8 IAMSGGVDSTATAILQKQKGP-VLGFFMKLNQPDYETQR-------DRVSQIAQKLDIKL 59 Query: 70 HTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGADYIATGHY 129 ++ E+ + V + F A Y G TPNP I+CNKEIKF + A G + IATGHY Sbjct: 60 EIIDLTEEFQEYVLKYFSASYFKGLTPNPCIICNKEIKFG-LFQQAILRQGVERIATGHY 118 Query: 130 VRRADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQVRKIAEDLGLVT 189 + +L +G+D +KDQSYFL LS EQ+A S+FP+G + K + + E G Sbjct: 119 AQIHKTAAGYQLHKGVDPHKDQSYFLSRLSQEQLAHSIFPLGGMHKGAIYDLVEAHGFHD 178 Query: 190 AKKKDSTGICFIGERKFREFLGR--YLPAQPGKIITVDGDEIGEHQGLMYHTLGQRKGLG 247 + +S +CF+ + +FL + A G I+ DG +G+H+GL +T+GQR+GLG Sbjct: 179 FRGTESQDVCFLEQDNVVDFLEQTAEFSASSGNIVMNDGKILGKHKGLHRYTVGQRRGLG 238 Query: 248 IGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLHWVDREPFTGTMRCT 307 I P YV++ DV+NN ++V E+ +L + +HW+ + + + Sbjct: 239 IS-----YPVPLYVINLDVKNNNVIVG---ENEQLFHKTMAISDIHWISQPEREDLLHAS 290 Query: 308 VKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTPGQSAVFYNGEVCLGGGII 360 V R +V +++R VIFDEP A+TPGQ A Y LG G+I Sbjct: 291 VHIRSTHKGAQASVILKENNRASVIFDEPQRAITPGQFATIYKDTQVLGSGVI 343 >UniRef50_A8SJM7 Putative uncharacterized protein n=1 Tax=Parvimonas micra ATCC 33270 RepID=A8SJM7_9FIRM Length = 350 Score = 348 bits (894), Expect = 1e-94, Method: Composition-based stats. Identities = 125/360 (34%), Positives = 208/360 (57%), Gaps = 17/360 (4%) Query: 12 MSGGVDSSVSAWLLQQQGYQVEGLFMKN---WEEDDGEEYCTAAADLADAQAVCDKLGIE 68 MSGGVDS V+ LL ++GY+V G+ M D E+ C + + + DA+ V + +G++ Sbjct: 1 MSGGVDSCVACHLLLKEGYEVIGVTMNLVPKGHLYDEEKGCCSLSSVMDAKIVAEAMGVK 60 Query: 69 LHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGADYIATGH 128 +T++F E+ V E F+ EY G TPNP + CNK IKF +F++ L AD+I+TGH Sbjct: 61 HYTMSFREEFDRKVIENFVREYSLGYTPNPCVACNKYIKFNSFVDKI-RPLKADFISTGH 119 Query: 129 YVRRADV--DGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQVRKIAEDLG 186 Y + + L R DS KDQ+YFLY S E ++++LFP+ +LEK +VR+IA+D Sbjct: 120 YAKVEFDKNYNRYLLKRAKDSKKDQTYFLYNTSQEVLSKTLFPLADLEKEKVRQIAKDEN 179 Query: 187 LVTAKKKDSTGICFIGERKFREFLGRYLPA--QPGKIITVDGDEIGEHQGLMYHTLGQRK 244 ++T KKDS ICF+ R F+ + P + G + +G+++G+H+G++Y+T+GQRK Sbjct: 180 ILTYSKKDSEEICFVQNRDHGLFIKQRNPELIKEGYFVDENGNKLGKHKGIVYYTVGQRK 239 Query: 245 GLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLHWVDREPFTGTM 304 GLGI K +V + +N + + + L + ++ +++ + + Sbjct: 240 GLGIALGKR-----VFVSKINAIDNTVTL---SDEDALYKNKIRIREENFIPFDALEKPL 291 Query: 305 RCTVKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTPGQSAVFYNGEVCLGGGIIEQRL 364 +VK R+ Q++ + ++D + V F++ V A GQSAVFY ++ +GGGII++ Sbjct: 292 EVSVKVRHGQSETKGLLFYKNND-LFVEFEKQVRAPNKGQSAVFYLDDIVVGGGIIDEVY 350 >UniRef50_C8W7A2 tRNA(5-methylaminomethyl-2-thiouridylate)-methyl transferase n=2 Tax=Atopobium RepID=C8W7A2_ATOPD Length = 361 Score = 348 bits (894), Expect = 2e-94, Method: Composition-based stats. Identities = 145/360 (40%), Positives = 201/360 (55%), Gaps = 11/360 (3%) Query: 5 AKKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYCTAAADLADAQAVCDK 64 + V +GMSGGVDS++SA LL + GY V+ ++M+NW +D C A DLADA+ VC Sbjct: 2 GELVYLGMSGGVDSALSAALLLEAGYNVKAIYMRNWSKDLPGFKCPWADDLADAERVCVT 61 Query: 65 LGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGADYI 124 LGI+L + AEY V + L Y+ GRTPNPD++CN+ +KF F E A + GA+++ Sbjct: 62 LGIDLDVWDCEAEYKATVVDYLLDAYEHGRTPNPDVMCNQTVKFGTFAERAFAE-GANFV 120 Query: 125 ATGHYVRRADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGEL-EKPQVRKIAE 183 ATGHY + K LLR D++KDQ+YFL+ + ++LFP+G + K +VR + Sbjct: 121 ATGHYAQNVPGTKK--LLRAADAHKDQTYFLWRVPGHLFERTLFPIGHIATKAEVRSMCA 178 Query: 184 DLGLVTAKKKDSTGICFIGERKFREFLGRYLPAQPGKIITVD-GDEIGEHQGLMYHTLGQ 242 + GL K DS GICFIG R FL + G +I + G +G H G T+GQ Sbjct: 179 ERGLGIETKPDSDGICFIGPVGLRTFLLDTFQKKQGDVIEWETGKILGTHDGAFLFTVGQ 238 Query: 243 RKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLHWVDREPFTG 302 RKGL IGG YVV D N++ V P L + + +HW+ EP Sbjct: 239 RKGLNIGGGPAR-----YVVATDTLKNVVYVTCDLNCPALWTRRMELSDMHWISGEPAAD 293 Query: 303 TMRCTVKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTPGQSAVFYNGEVCLGGGIIEQ 362 R ++TR+ +P T D+ FD+PV V PGQSAV Y+G+ +GGGIIE Sbjct: 294 G-RYVIRTRHTGALVPVTFTLTDNQCGFAEFDQPVKTVAPGQSAVLYDGQEVVGGGIIEA 352 >UniRef50_D0ND99 tRNA-specific 2-thiouridylase mnmA, putative n=1 Tax=Phytophthora infestans T30-4 RepID=D0ND99_PHYIN Length = 416 Score = 348 bits (893), Expect = 2e-94, Method: Composition-based stats. Identities = 161/394 (40%), Positives = 220/394 (55%), Gaps = 48/394 (12%) Query: 12 MSGGVDSSVSAWLLQQQGYQVEGLFMKNWE--EDDGEEYCTAAADLADAQAVCDKLGIEL 69 MSGGVDSSV+A LL++QGY V G++MKNW+ +++GE C ++ D Q VC++LGIE Sbjct: 1 MSGGVDSSVAALLLKRQGYHVTGVYMKNWDPSDEEGESACPVDSEYVDVQKVCEQLGIEA 60 Query: 70 HTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGADYIATGHY 129 VN YW+ VF LA Y+ G TPNPDILCN+EIKFKAF EFA + +GAD +ATGHY Sbjct: 61 QMVNLVQSYWNQVFAPCLAGYEEGLTPNPDILCNREIKFKAFTEFA-KQIGADCVATGHY 119 Query: 130 --VRRADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQVRKIAEDLGL 187 +R A+ G L D +KDQSYFL ++ + A LFP+G + K +VR+IAE GL Sbjct: 120 AALRPAEKGGPPNLCAAEDESKDQSYFLSSVDGKAFANVLFPLGGMRKTEVRQIAESEGL 179 Query: 188 VTAKKKDSTGICFIGERKFREFLGRYLPAQPGKIITVDGDEIGEHQGLMYHTLGQRKGLG 247 TA KKDS GICFIG+R F +F+ +Y+ Q G TV G+++ H G +T+GQ L Sbjct: 180 CTATKKDSVGICFIGKRNFADFIHQYIQRQDGYFYTVGGEKMHPHHGFTAYTVGQGARL- 238 Query: 248 IGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLI--AQQLHWVDREPFT---- 301 +G W+VV K ++ ++VA+G +P L S L A+Q +W+ + Sbjct: 239 -----QGMSAKWFVVGKHKFDHSVIVAEGTRNPALFSDALFASAEQFNWMAGDLPPELRD 293 Query: 302 -GTMRCTVKTRYRQTDIPCTVKALDDDR-----------------------------IEV 331 G MRC + RYRQ CT+ + + + V Sbjct: 294 TGRMRCFYRVRYRQDLDKCTISLVSNREARASASKLHDWQPELVANEEGVENGEKIYLRV 353 Query: 332 IFDEPVAAVTPGQSAVFYNGE-VCLGGGIIEQRL 364 FD P VTP Q+ V Y + +C GGG I Sbjct: 354 DFDHPQRGVTPEQALVLYRSDGLCYGGGPIAAAG 387 >UniRef50_C3J919 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase n=15 Tax=Bacteria RepID=C3J919_9PORP Length = 383 Score = 348 bits (893), Expect = 2e-94, Method: Composition-based stats. Identities = 131/370 (35%), Positives = 206/370 (55%), Gaps = 24/370 (6%) Query: 8 VIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNW-EEDDGEEYCTAAADLADAQAVCDKLG 66 + V SGGVDSSV+ LL Q G++ + +++ E+++G C A D+ + K Sbjct: 21 IAVLASGGVDSSVAVHLLLQAGFRPDLFYIRIGMEDEEGFIDCPAEEDMEMVTLLARKYQ 80 Query: 67 IELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGADYIAT 126 + ++ EYW+ V + + + G TPNPD++CNK IKF F E DYIAT Sbjct: 81 LHYEVIDLHKEYWERVVKYTIESVRQGLTPNPDMMCNKLIKFGVFEERVGHR--YDYIAT 138 Query: 127 GHYVRRADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQVRKIAEDLG 186 GHY A VDGK+ L D KDQ+ FL ++ +QI++ LFP+G L K QVR +AE+ G Sbjct: 139 GHYASTARVDGKTFLATAPDPVKDQTDFLAQINFKQISKLLFPLGCLTKQQVRMVAEEAG 198 Query: 187 LVTAKKKDSTGICFIGERKFREFLGRYLPAQPGKIITVD-GDEIGEHQGLMYHTLGQRKG 245 L A +KDS GICF+G+ + +F+ RYL +PG+II + G +G HQG +HT+GQRKG Sbjct: 199 LANAHRKDSQGICFLGKINYNDFIERYLGKRPGRIIEYETGKTLGTHQGFWFHTIGQRKG 258 Query: 246 LGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLHWVDREPFTGT-- 303 LG+ + PW+VV KD + NI++V++G++ + + ++ + F Sbjct: 259 LGL------SGGPWFVVKKDCKRNIILVSRGYDPLTQYGTEIFVDKFDFITEDLFAPEGA 312 Query: 304 ---------MRCTVKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTPGQSAVFYNGE-- 352 + T+K R+ + T++ L+ ++ + P+ + PGQ AV Y+ E Sbjct: 313 VGNKEGAQVVPITLKIRHTPEFVRATIRRLERGY-HIVSETPIQGIAPGQYAVIYDPESR 371 Query: 353 VCLGGGIIEQ 362 +C G G+I + Sbjct: 372 LCFGSGMIVK 381 >UniRef50_B9L801 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase n=1 Tax=Nautilia profundicola AmH RepID=B9L801_NAUPA Length = 341 Score = 347 bits (891), Expect = 4e-94, Method: Composition-based stats. Identities = 127/358 (35%), Positives = 195/358 (54%), Gaps = 24/358 (6%) Query: 6 KKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYCTAAADLADAQAVCDKL 65 K+V+VG+SGGVDS++S +LL++QGY V G++MK E + ++A + KL Sbjct: 3 KRVLVGVSGGVDSAMSVYLLKEQGYDVVGIYMKMHEGVNHV------ENVAKLNRLSKKL 56 Query: 66 GIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGADYIA 125 G E + E+ V+E F+ YK G TPNP +CN +IKF F+ F E G + A Sbjct: 57 GFEYVIEDVEDEFRKEVYEYFVESYKQGITPNPCAMCNIKIKFGIFMGFL-EKYGCELAA 115 Query: 126 TGHYVRRADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQVRKIAEDL 185 TGHYVR + L + D +KDQSYFL+ + + + + LFP+GE K +++K+A ++ Sbjct: 116 TGHYVR----NDGEFLYQAKDQSKDQSYFLFGIKKKVLPKILFPLGEYTKDEIKKLASEI 171 Query: 186 GLVTA-KKKDSTGICFIGERKFREFLGRYL-PAQPGKIITVDGDEIGEHQGLMYHTLGQR 243 GL +K+S ICFI + + + L + P + GK++ G +IG H+G ++T+GQR Sbjct: 172 GLDEFASQKESQDICFI-DNSYIDVLKLHFNPERKGKVVNKRGQKIGVHKGYSFYTVGQR 230 Query: 244 KGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLHWVDREPFTGT 303 KG + + +P YV+ D ++N L+V + L + + ++ + Sbjct: 231 KGFNLF----KSHKPQYVIGIDAKSNTLIVGDKKD---LEKKQVFLKGVNLFIDD---KV 280 Query: 304 MRCTVKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTPGQSAVFYNGEVCLGGGIIE 361 C K RYR +P VK + V F EPV+ V GQ+ VFY GE LGGG I Sbjct: 281 FECEAKIRYRAPKVPAVVKMESKSKAVVNFHEPVSGVAKGQACVFYEGEKLLGGGWIR 338 >UniRef50_Q12093 Mitochondrial tRNA-specific 2-thiouridylase 1 n=10 Tax=Saccharomycetaceae RepID=MTU1_YEAST Length = 417 Score = 346 bits (889), Expect = 5e-94, Method: Composition-based stats. Identities = 134/389 (34%), Positives = 188/389 (48%), Gaps = 26/389 (6%) Query: 1 MSETAKKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEE----DDGEEYCTAAADLA 56 + VIV MS GVDSSV+A L + G++M+NW E DD + D Sbjct: 22 LPAKFDNVIVAMSSGVDSSVAAALFAGEFPNTRGVYMQNWSESQSLDDPGKEPCYERDWR 81 Query: 57 DAQAVCDKLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAA 116 D V L I + VNF +YW +VFE L Y G TPNPDI CNK +KF E+ Sbjct: 82 DVNRVAKHLNIRVDKVNFEQDYWIDVFEPMLRGYSEGSTPNPDIGCNKFVKFGKLREWLD 141 Query: 117 EDLG--ADYIATGHYVRRADV---DGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVG 171 E G ++ TGHY R G LLR + KDQSY+L ++ ++ L P+G Sbjct: 142 EKYGTGNYWLVTGHYARVMQEMNGKGLFHLLRSIYRPKDQSYYLSQINSTVLSSLLLPIG 201 Query: 172 ELEKPQVRKIAEDLGLVTAKKKDSTGICFIGE---RKFREFLGRYLPAQPGKIITVD--- 225 L KP+VR +A+ GL TA+K DS GICF+ KF+ FL YLP+ PG IITVD Sbjct: 202 HLTKPEVRDLAKYAGLPTAEKPDSQGICFVNNSQHGKFKNFLKHYLPSSPGDIITVDPQS 261 Query: 226 --GDEIGEHQGLMYHTLGQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLM 283 G H GL +T+GQ+ G+ + + W+V +K + N +++ +G ++P L Sbjct: 262 GAKTTWGRHDGLWSYTIGQKVGISMPQADPNYQGTWFVSEKLRDTNEILIVRGRDNPALY 321 Query: 284 SVGLIAQQLHWVDREP-----FTGTMRCTVKTRYRQTDI---PCTVKALDDD-RIEVIFD 334 S + + + F T T++ R Q + C + D+ I + Sbjct: 322 SDTMRIENFSSLGPREDTINAFQNTGALTLQFRSLQVPVQIKSCKLNRSADNLDITIHLA 381 Query: 335 EPVAAVTPGQSAVFYNGEVCLGGGIIEQR 363 A+TPGQS Y + LG G I Sbjct: 382 SKQRAITPGQSCCLYIDDRVLGSGPISHV 410 >UniRef50_A8F5H8 tRNA-specific 2-thiouridylase mnmA n=3 Tax=Thermotogaceae RepID=MNMA_THELT Length = 349 Score = 346 bits (889), Expect = 6e-94, Method: Composition-based stats. Identities = 121/365 (33%), Positives = 189/365 (51%), Gaps = 24/365 (6%) Query: 7 KVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDD------GEEYCTAAADLADAQA 60 K+ + +SGGVDS+V+ + L+ +GY++ MK +++ + C + +D DA+ Sbjct: 2 KIGILLSGGVDSAVALYQLKNEGYEIVAYHMKTMKDEFFLNRQVKHKICCSPSDTVDAKL 61 Query: 61 VCDKLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLG 120 + G+ L VN + + + +L EY GRTPNP CN+ IKF ++ ED G Sbjct: 62 IAKTAGVPLKVVNLHEIFKEKIITYYLQEYTRGRTPNPCYFCNRFIKFGYLMDLMIED-G 120 Query: 121 ADYIATGHYVRRADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQVRK 180 D I++GHY R D +LL+ LD KDQSYFL ++ E++ + +FP G+ K ++R Sbjct: 121 VDVISSGHYARVVDG----KLLKALDKEKDQSYFLASIEKERLKKIVFPNGDKTKDEIRD 176 Query: 181 IAEDLGLVTAKKKDSTGICFIGERKFREFLGRY-LPAQPGKIITVDGDEIGEHQGLMYHT 239 IA+ G+ K +S +CFI + + F + + G I G +IGEH GL+ +T Sbjct: 177 IAKKAGIHVHSKAESQDLCFIPDGDQKRFFEEQGIKIKSGPIFDKYGKKIGEHTGLINYT 236 Query: 240 LGQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLHWVDREP 299 +GQRK +G+ E YV + N L+V + S + + Sbjct: 237 IGQRK-IGVS-----AGERVYVTRICADRNALIVGNEKDVQ---SDKFSVIDFNLLVD-- 285 Query: 300 FTGTMRCTVKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTPGQSAVFYNGEVCLGGGI 359 TVK R T++PC V ++ R+ V PV AV PGQ+AVFY G++ +G GI Sbjct: 286 IDKNFEATVKVRKNSTEVPCKVSL-ENHRVIVKTTMPVFAVAPGQAAVFYRGDIVIGAGI 344 Query: 360 IEQRL 364 IE+ L Sbjct: 345 IEKIL 349 >UniRef50_Q8A2F1 tRNA-specific 2-thiouridylase mnmA 2 n=8 Tax=Bacteroides RepID=MNMA2_BACTN Length = 370 Score = 346 bits (889), Expect = 6e-94, Method: Composition-based stats. Identities = 130/386 (33%), Positives = 198/386 (51%), Gaps = 40/386 (10%) Query: 1 MSETAKKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYCTAAADLADAQA 60 M E K+V++GMSGG DSSV+A L + GY+V G+ + +E +D EY L DA+ Sbjct: 1 MMEENKRVLLGMSGGTDSSVAAMRLLEAGYEVTGVTFRFYELNDSTEY------LEDARH 54 Query: 61 VCDKLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLG 120 + ++LGI T + + + E F+ EY G TP P LCN +K+ L A+++G Sbjct: 55 LAERLGIRHITYDAREIFRKQIIEYFVHEYMVGHTPVPCTLCNNYLKWP-LLSKIADEMG 113 Query: 121 ADYIATGHYVRRADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQVRK 180 YIATGHYVR+ VD + DS+KDQ++FL+ L + + + L P+G++ K + R Sbjct: 114 IFYIATGHYVRKVKVDDTCYITYAADSDKDQTFFLWGLKQDILRRMLLPMGDITKVEARA 173 Query: 181 IAEDLGL-VTAKKKDSTGICFIGERKFREFLGRYL-----------------------PA 216 A + G A K+DS G+CF +R FL +L Sbjct: 174 FAAERGFQKVAVKRDSLGVCFCP-MDYRSFLKMWLVSNCQPQVSVGQPQVSAGQTWSAEV 232 Query: 217 QPGKIITVDGDEIGEHQGLMYHTLGQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQG 276 + G+ + GD I H+G ++T+GQR+GLGI + +V + E N +V+A Sbjct: 233 RRGRFVDEKGDFIAWHEGYPFYTVGQRRGLGIHLNR-----AVFVKEIRPEKNEVVLAS- 286 Query: 277 HEHPRLMSVGLIAQQLHWVDREPFTGTMRCTVKTRYRQTDIPCTVKALDDDRIEVIFDEP 336 L ++ + + V+RE G VK RYR+ + CTV D+ + V EP Sbjct: 287 --LQALEKTEMLLKDWNIVNRERLLGHADIIVKIRYRKQENHCTVTVTLDNFLHVQLHEP 344 Query: 337 VAAVTPGQSAVFYNGEVCLGGGIIEQ 362 + A+ GQ+A FY + LGGGII + Sbjct: 345 LTAIASGQAAAFYKDGLLLGGGIIVE 370 >UniRef50_D1XXK1 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase n=1 Tax=Prevotella bivia JCVIHMP010 RepID=D1XXK1_9BACT Length = 386 Score = 346 bits (888), Expect = 8e-94, Method: Composition-based stats. Identities = 137/387 (35%), Positives = 198/387 (51%), Gaps = 37/387 (9%) Query: 4 TAKKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYCTAAADLADAQAVCD 63 KK+ V +SGGVDSSV W + G + ++K E+ C++ DL A AVC Sbjct: 7 KDKKIAVLLSGGVDSSVVVWEFARLGLHPDCYYIKIGPEEAEAWDCSSEEDLEMATAVCR 66 Query: 64 KLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGADY 123 + +L ++ EYW V + + + KAG TPNPD++CN+ IKF AF E + D Sbjct: 67 RFECKLEVIDCHKEYWGQVTKYTMDKVKAGFTPNPDVMCNRLIKFGAFYEK--KGYEYDL 124 Query: 124 IATGHYVRRADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQVRKIAE 183 IATGHY + +DGK L D KDQ+ FL + Q+ +++FP+G EK +VR+IAE Sbjct: 125 IATGHYAQTKWIDGKKWLCTSPDPVKDQTDFLAQIYDWQLQKAIFPIGHYEKNEVREIAE 184 Query: 184 DLGLVTAKKKDSTGICFIGERKFREFLGRYLPAQPGKIITVD-GDEIGEHQGLMYHTLGQ 242 L+ AK+KDS GICF+G + E++ RYL G+II ++ G +IGEH+GL +HT+GQ Sbjct: 185 REHLINAKRKDSQGICFLGNIDYNEYVRRYLGENAGEIIELETGKKIGEHKGLWFHTIGQ 244 Query: 243 RKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLHWVDREPFTG 302 RKGLG+GG PW+V+ KDVE NIL V+ G++ LHW+ P Sbjct: 245 RKGLGLGGG------PWFVIKKDVEKNILYVSHGYDPETAYKRKFKVCDLHWLTVSPSEL 298 Query: 303 T-------------------MRCTVKTRYRQTDIPCTVK-------ALDDDRIEVIFDEP 336 + T K R+ ++ ++ + + Sbjct: 299 EDSNGIILQNGCCSSFKHTLIPITFKIRHTPEYHQGYLEVLSEEGHLVEGSEALIHAQKK 358 Query: 337 VAAVTPGQSAVFYNG--EVCLGGGIIE 361 + V PGQ V Y+ E C G G I Sbjct: 359 IHGVAPGQFCVIYDEEHERCFGSGEIT 385 >UniRef50_C9RQ01 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase n=1 Tax=Fibrobacter succinogenes subsp. succinogenes S85 RepID=C9RQ01_FIBSS Length = 366 Score = 346 bits (888), Expect = 8e-94, Method: Composition-based stats. Identities = 135/375 (36%), Positives = 194/375 (51%), Gaps = 27/375 (7%) Query: 2 SETAKKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEED------DGEEYCTAA--- 52 K+V VG+SGGVDS++SA+LL++QGY+V G+ M W++ +G E C Sbjct: 1 MSQKKRVAVGLSGGVDSALSAYLLKKQGYEVVGMTMATWDDSVKMPAVEGREGCYGPSED 60 Query: 53 ADLADAQAVCDKLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFL 112 ++ +A+ V ++LGI + V A +Y V + F AEY+AGRTPNP + CN+ IKF A Sbjct: 61 KNIEEAKLVAERLGIPHYVVPVAEDYKREVLDYFRAEYRAGRTPNPCVRCNQSIKFGAL- 119 Query: 113 EFAAEDLG--ADYIATGHYVR-RADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFP 169 + AA LG DY ATGHY R L LD +KDQ+YFL LS EQ++ +FP Sbjct: 120 QHAARKLGIDFDYFATGHYARLDFKNPDVPFLYEALDEHKDQTYFLSRLSAEQLSTVIFP 179 Query: 170 VGELEKPQVRKIAEDLGLVTA-KKKDSTGICFIGERKFREFLGRYLPAQPGKIITVDGDE 228 +G ++K V+ +A+++G K++S FI + L PG I V+G Sbjct: 180 LGGMQKADVKALAKEIGWDDFATKRESQD--FIECGDY-SVLFDESDNVPGDFIDVNGKV 236 Query: 229 IGEHQGLMYHTLGQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLI 288 +G+H+G++++T+GQRKGL IG G EP YVV D +N +++ L + Sbjct: 237 LGKHKGIVHYTIGQRKGLNIG----GQAEPLYVVAIDAHHNQVILGPRS---ALSCTEVS 289 Query: 289 AQQLHW-VDREPFTGTMRCTVKTRYRQTDIPCTVKALDD--DRIEVIFDEPVAAVTPGQS 345 A L+ V T R + ALD I V FDEP A PGQ Sbjct: 290 AVDLNLMVSETSPLLKEPLTAHIRLGHKGATARITALDTAAGTISVKFDEPQFASAPGQV 349 Query: 346 AVFYNGEVCLGGGII 360 V Y + + II Sbjct: 350 LVLYADKGVVASAII 364 >UniRef50_B2RHP0 tRNA-specific 2-thiouridylase mnmA n=5 Tax=Bacteroidales RepID=MNMA_PORG3 Length = 361 Score = 345 bits (886), Expect = 1e-93, Method: Composition-based stats. Identities = 122/366 (33%), Positives = 192/366 (52%), Gaps = 20/366 (5%) Query: 8 VIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNW-EEDDGEEYCTAAADLADAQAVCDKLG 66 V +SGGVDSSV L ++GY+ +++ E++DG C A D+ + + G Sbjct: 3 VAALVSGGVDSSVVVHRLCEEGYKPAIFYIRIGMEDEDGYIDCPAEEDIELTTLIARRYG 62 Query: 67 IELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGADYIAT 126 V+ EYW+ V + + G TPNPD++CNK IKF F E D IAT Sbjct: 63 CPFEVVDLHKEYWERVVSYTVETVRRGLTPNPDMMCNKLIKFGCFEERWG--YQFDRIAT 120 Query: 127 GHYVRRADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQVRKIAEDLG 186 GHY ++GK+ L D KDQ+ FL ++ QI++ +FP+G L K +VR IA G Sbjct: 121 GHYATTDLLNGKTYLSTAKDPVKDQTDFLAQINFAQISKLMFPIGHLLKSEVRAIANAAG 180 Query: 187 LVTAKKKDSTGICFIGERKFREFLGRYLPAQPGKIITVD-GDEIGEHQGLMYHTLGQRKG 245 L +AK+KDS GICF+G+ + +F+ RYL + G+II ++ G IG HQG +HT+GQRKG Sbjct: 181 LPSAKRKDSQGICFLGKIDYNDFIERYLGKKEGRIIELETGKVIGRHQGYWFHTIGQRKG 240 Query: 246 LGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLHWVDREPFTGTM- 304 LG+ + PW+VV KD++ NI++V++G++ + + ++ + + Sbjct: 241 LGL------SGGPWFVVKKDIKRNIILVSRGYDPDTQYGKTIEMETFDFITEDAYEAGYW 294 Query: 305 ------RCTVKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTPGQSAVFYNGEV--CLG 356 T K R+ + + + +E + + PGQ V Y+ + C G Sbjct: 295 NREDATPVTFKIRHTPEFTRGLLYKGEKGY-RLESEERIQGIAPGQYCVIYDEDHHLCYG 353 Query: 357 GGIIEQ 362 G+I + Sbjct: 354 SGMITK 359 >UniRef50_A6Q239 tRNA-specific 2-thiouridylase mnmA n=2 Tax=Epsilonproteobacteria RepID=MNMA_NITSB Length = 339 Score = 343 bits (879), Expect = 8e-93, Method: Composition-based stats. Identities = 129/359 (35%), Positives = 198/359 (55%), Gaps = 25/359 (6%) Query: 5 AKKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYCTAAADLADAQAVCDK 64 +KK++V MSGGVDSS +A LLQ +GY+V G++MK ++ ++A+ Q V Sbjct: 2 SKKIVVAMSGGVDSSYTANLLQSRGYEVIGVYMKFHPREEYH-----QKNIANIQKVAKH 56 Query: 65 LGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGADYI 124 LGIE H ++ E+ + V++ F+ Y AG TPNP +CN+ +KF +EFA ++LG D + Sbjct: 57 LGIEYHVLDRTKEFQERVYQPFVDSYVAGLTPNPCAMCNRVMKFTELIEFA-DELGVDNV 115 Query: 125 ATGHYVRRADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQVRKIAED 184 ATGHY + D +KDQSYFL+ L E + + +FP+G+ K V+K A Sbjct: 116 ATGHYA----KTDGQFIYEATDKSKDQSYFLFNLKKEFLPRIIFPLGDWYKENVKKEAMK 171 Query: 185 LGL--VTAKKKDSTGICFIGERKFREFLGRYLPAQ-PGKIITVDGDEIGEHQGLMYHTLG 241 + L A++K+S+ ICF+ E + + L + + PG+++ G IGEH+G M++T+G Sbjct: 172 ILLLKSIAEQKESSEICFV-ETNYIDVLKEHTEVEMPGEVVDTHGKVIGEHKGYMHYTIG 230 Query: 242 QRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLHWVDREPFT 301 +RKG + +P YV+D N +VV + L ++ + L+ + Sbjct: 231 KRKGFRLF----KAHQPHYVLDIIPHKNRIVVGTKEQ---LEKRQIVLRGLNMFLDQ--- 280 Query: 302 GTMRCTVKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTPGQSAVFYNGEVCLGGGII 360 C +K RYR +PC VK +D V EPV V GQ+ VFY+ E LGGG I Sbjct: 281 KEFDCYIKIRYRTHKVPCHVK-IDGSVASVTLKEPVYGVAKGQAGVFYDEEKVLGGGWI 338 >UniRef50_A7ANM3 tRNA methyl transferase family protein n=1 Tax=Babesia bovis RepID=A7ANM3_BABBO Length = 665 Score = 339 bits (871), Expect = 7e-92, Method: Composition-based stats. Identities = 127/374 (33%), Positives = 187/374 (50%), Gaps = 21/374 (5%) Query: 7 KVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGE-EYCTAAADLADAQAVCDKL 65 +V +SGGVDS+V+ WLL+ +G+ +E ++K W ++G+ C +ADL A V L Sbjct: 288 RVACLVSGGVDSAVALWLLKSRGFDIEAFYLKVWSVENGDLGDCQWSADLEHAMGVTKLL 347 Query: 66 GIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGADYIA 125 + LH V F Y V + F+A G TPNPD+ CN+ IKF AFL++A G +IA Sbjct: 348 NVPLHVVPFQDVYHQRVLDPFVAGASLGETPNPDVCCNEFIKFGAFLDYAVR-WGFSHIA 406 Query: 126 TGHYVRRADV------DGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQVR 179 +GHY + +RL D KDQ+YFL LS Q+ + +FP+ +L K +VR Sbjct: 407 SGHYASIIEDLVPGTSTRIARLRLCRDLRKDQTYFLSRLSQSQLRRVMFPLSQLYKNEVR 466 Query: 180 KIAEDLGLVTAKKKDSTGICFIGERKFREFLGRYLPAQPGKIITVD-GDEIGEHQGLMYH 238 IA LG +K+S G+CF+G+ + FL L PG I+ D G+ IG H GL + Sbjct: 467 TIARTLGFSNYDRKESMGLCFLGKVDVKSFLSHRLGEVPGPIVDHDTGNCIGRHHGLFHF 526 Query: 239 TLGQRKGLGIGGTK-EGTEEPWYVVDKDVENNILVVAQGHEH-----PRLMSVGLIAQQL 292 T+GQR+G+ T + YVV KD++ N L V+ + P + + Sbjct: 527 TIGQREGIARYLNSVRDTNQSRYVVAKDIDTNTLYVSTRYHTKCYTEPGSVRRRFRISDI 586 Query: 293 HWVDRE---PFTGTMRCTVKTRYRQTDIPCTVKALDDDR---IEVIFDEPVAAVTPGQSA 346 W + T ++K R+ T + D D V ++ + GQ A Sbjct: 587 RWNVPDFKRFITDPNSLSMKVRHSPTLCRGDISFDDLDTASGASVHLEKADIGLATGQYA 646 Query: 347 VFYNGEVCLGGGII 360 V Y+G CLG G I Sbjct: 647 VIYSGLNCLGAGKI 660 >UniRef50_C7NES3 tRNA(5-methylaminomethyl-2-thiouridylate)-methyl transferase n=5 Tax=Fusobacteriaceae RepID=C7NES3_LEPBD Length = 364 Score = 339 bits (869), Expect = 1e-91, Method: Composition-based stats. Identities = 127/373 (34%), Positives = 206/373 (55%), Gaps = 25/373 (6%) Query: 1 MSET--AKKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEED---DGEEYCTAAADL 55 M++ KKV+VGMSGG+DSSV+A LL+QQGY+V G+ +K+ ++ + + C + D+ Sbjct: 1 MNKKLDDKKVVVGMSGGIDSSVAALLLKQQGYEVIGVTLKHLPDELSENPGKTCCSLDDI 60 Query: 56 ADAQAVCDKLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFA 115 DA+ C LGI + +N E+ +V E F+ Y AG+TP+P ++C++++K K +EFA Sbjct: 61 NDARYTCYNLGIPHYVLNVVEEFKKDVMEYFIKMYNAGKTPSPCVICDEKVKIKKLVEFA 120 Query: 116 AEDLGADYIATGHYVRRADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEK 175 + +G YI+TGHY + ++ + LL ++ KDQ+Y LY L + + + LFP+ E EK Sbjct: 121 -DKMGIKYISTGHYSKVSENN---MLLWDKNNRKDQTYMLYRLDKDIVERFLFPLAEYEK 176 Query: 176 PQVRKIAEDLGLVTAKKKDSTGICFIGERKFREFLGRYLP--AQPGKIITVDGDEIGEHQ 233 +VR+IA G+ T K DS GICF + FL + L + G + +G IGEH Sbjct: 177 SEVREIARQNGIHTHNKPDSQGICFAPNG-YIPFLKKVLGNDVKKGNFVDKNGKIIGEHI 235 Query: 234 GLMYHTLGQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLH 293 G ++T+GQR+GLG+ K P++V++ E N +VV + L+ + Sbjct: 236 GYQFYTIGQRRGLGLNLGK-----PFFVLELRPETNEVVVG---DFEELLIKEIEVINYK 287 Query: 294 WVDREPFTGTMRCTVKTRYRQTDIPCTVKAL-----DDDRIEVIFDEPVAAVTPGQSAVF 348 + + T + R+ + +K L +++RI FDE + GQ VF Sbjct: 288 FHYSLENIIGKKLTARPRFSSKGLTGELKILKNEESNENRIIFEFDEKTHENSEGQHIVF 347 Query: 349 YNGEVCLGGGIIE 361 Y + +GGG I+ Sbjct: 348 YLNDEIVGGGEIK 360 >UniRef50_B1VZW7 tRNA-specific 2-thiouridylase mnmA n=44 Tax=Actinobacteria (class) RepID=MNMA_STRGG Length = 378 Score = 336 bits (863), Expect = 6e-91, Method: Composition-based stats. Identities = 133/374 (35%), Positives = 186/374 (49%), Gaps = 17/374 (4%) Query: 1 MSETAKK---VIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNW----EEDDGEEYCTAAA 53 M++T+++ V+ MSGGVDS+V+A + G+ V G+ + G C Sbjct: 1 MTQTSQRPLRVLAAMSGGVDSAVAAARAAEAGHDVTGVHLALSANPQSFRTGARGCCTIE 60 Query: 54 DLADAQAVCDKLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLE 113 D DA+ D +GI + + A + ++V E F+AEY+AGRTPNP + CN++IKF A L Sbjct: 61 DSRDARRAADVIGIPFYVWDLAERFREDVVEDFVAEYEAGRTPNPCLRCNEKIKFAA-LL 119 Query: 114 FAAEDLGADYIATGHYVRRA-DVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGE 172 A LG D + TGHY DG L R D KDQSY L L +Q+A ++FP+G+ Sbjct: 120 DKALALGFDAVCTGHYATVVLAEDGSRELHRASDMAKDQSYVLGVLDEKQLAHAMFPLGD 179 Query: 173 --LEKPQVRKIAEDLGLVTAKKKDSTGICFIGERKFREFLGRYL-PAQPGKIITVDGDEI 229 K ++R AE GL AKK DS ICFI + + FL L G I+ G ++ Sbjct: 180 TLTTKDEIRAEAERRGLAVAKKPDSHDICFIADGDTQGFLANRLGGPAEGDILDESGTKL 239 Query: 230 GEHQGLMYHTLGQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIA 289 G H+G T+GQRKGL IG +P YV+D NN + V L L A Sbjct: 240 GTHEGAFGFTIGQRKGLKIGHPAP-DGKPRYVLDISPVNNTVTVGPVE---ALDVTALTA 295 Query: 290 QQLHWVDREPFTGTMRCTVKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTPGQSAVFY 349 + W P +G T + R + T + +D + V F EPV V PGQ+ V Y Sbjct: 296 IKPRW-CGTPPSGPGTYTAQLRAHGGESEVTAELVDGTELNVTFTEPVRGVAPGQAVVLY 354 Query: 350 NGEVCLGGGIIEQR 363 +G +G I Sbjct: 355 DGTRVVGSATIATT 368 >UniRef50_B5Y9X9 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase n=1 Tax=Coprothermobacter proteolyticus DSM 5265 RepID=B5Y9X9_COPPD Length = 347 Score = 334 bits (858), Expect = 2e-90, Method: Composition-based stats. Identities = 119/357 (33%), Positives = 184/357 (51%), Gaps = 22/357 (6%) Query: 7 KVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDD-GEEYCTAAADLADAQAVCDKL 65 K+ VG+SGG+DS+VS L+++G+ V +F+ E + E+ C + A+ V Sbjct: 2 KIAVGLSGGIDSTVSLLRLKEEGHHVTAVFLNMLPEGEYQEKTCCSVDSQLLAKRVAMNQ 61 Query: 66 GIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGADYIA 125 G+ + + +V +F A K G TPNP + CN+ +K AF+E A + G D +A Sbjct: 62 GVPFEVWDLTETFQKHVINIFKAMVKKGLTPNPCVFCNRCVKIGAFVELAMQK-GFDAVA 120 Query: 126 TGHYVRRADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQVRKIAEDL 185 TGHY R+ + L + +DS KDQSY L + + +A+ LFP+GEL + +V A Sbjct: 121 TGHYARQREG----NLYKAIDSWKDQSYMLALVEKQVLAKVLFPLGELTREEVISYAHSH 176 Query: 186 GLVTAKKKDSTGICFIGERKFREFLGRYLPA--QPGKIITVDGDEIGEHQGLMYHTLGQR 243 G+ + S ICF+ +F+ + + +PG II G IGEH+G Y+T+GQR Sbjct: 177 GI-KHVPRSSQDICFMPHGGMEQFITQNISEVTKPGPII-FRGHIIGEHRGYPYYTVGQR 234 Query: 244 KGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLHWVDREPFTGT 303 +GLG+ EP YV D +N + V E L S + ++ + T Sbjct: 235 RGLGV-----AHREPLYVKKIDPISNTVHVGTSEE---LFSEHMTVVMMN----QFSALT 282 Query: 304 MRCTVKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTPGQSAVFYNGEVCLGGGII 360 + +K RYR +P V+ ++ + V F +PV A+TPGQ AV Y G+ GII Sbjct: 283 RQVEIKIRYRAHSVPAFVEQSNEPILSVRFSQPVRAITPGQIAVAYEGDKVQWAGII 339 >UniRef50_B0VEY5 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase n=1 Tax=Candidatus Cloacamonas acidaminovorans RepID=B0VEY5_9BACT Length = 382 Score = 334 bits (858), Expect = 2e-90, Method: Composition-based stats. Identities = 125/356 (35%), Positives = 192/356 (53%), Gaps = 24/356 (6%) Query: 2 SETAKKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEED--------DGEEYCTAAA 53 + V VG+SGG+DS+++A+LLQ+ GY+V G+ M+ ++E+ G Sbjct: 1 MQKKTSVAVGISGGIDSAMTAYLLQESGYRVIGITMQTYDENIEMDKTLKSGCFGPAQEE 60 Query: 54 DLADAQAVCDKLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLE 113 ++ A + KLGIE + + E+ V + F Y G+TPNP ++CN IKF A L Sbjct: 61 NILSASLLWRKLGIEHYIIPLQEEFRHKVIDYFCETYIKGKTPNPCLVCNAYIKF-ALLP 119 Query: 114 FAAEDLG--ADYIATGHYVRRADVD--GKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFP 169 A LG DY ATGHY + + + ++ + D+NKDQSYFL LS EQ+AQ+LFP Sbjct: 120 EKAHSLGLEFDYFATGHYAKIGFNNTLKRYQIRKAKDANKDQSYFLAFLSQEQLAQTLFP 179 Query: 170 VGELEKPQVRKIAEDLGLVT-AKKKDSTGICFIGERKFREFLGRYLPAQPGKIITVDGDE 228 +G+ K +++K+A G ++K+S F+ E L + PG+II + G Sbjct: 180 LGDYTKQEIKKMAIGKGFTELVERKESQD--FLQSSDL-EVLFKPEDFNPGEIIDMQGKV 236 Query: 229 IGEHQGLMYHTLGQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLI 288 IG+H+G++ +T+GQR+ LGI G EP+YV+ D ENN +V+ L Sbjct: 237 IGKHKGIINYTIGQRRNLGI----SGMPEPYYVLQIDAENNRIVLGPKE---YLFKKKCS 289 Query: 289 AQQLHWVDREPFTGTMRCTVKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTPGQ 344 A ++WV R K R + + C V ++D+ IEV+F EP ++TPGQ Sbjct: 290 ATDMNWVSLPAPEKKFRAKAKIRQQHSPADCIVTPINDNTIEVVFKEPQLSITPGQ 345 >UniRef50_C5DEF9 KLTH0C08844p n=2 Tax=Saccharomycetaceae RepID=C5DEF9_LACTC Length = 426 Score = 334 bits (857), Expect = 3e-90, Method: Composition-based stats. Identities = 124/390 (31%), Positives = 184/390 (47%), Gaps = 32/390 (8%) Query: 1 MSETAKKVIVGMSGGVDSSVSAWLLQQQGY-QVEGLFMKNWEEDDGEEYCTAAADLADAQ 59 + +++ MS GVDSSV+A + G+ G++M+NW E E D D Q Sbjct: 29 LPSKFDNIVIAMSSGVDSSVAAAMF--SGFPNACGIYMQNWTETRSEREPCHERDWKDVQ 86 Query: 60 AVCDKLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDL 119 V L + + VNF +YW +VFE L +Y+ G TPNPDI CN+ IKF L Sbjct: 87 KVGAHLNLPVEKVNFEQDYWLDVFEPMLRDYEQGVTPNPDIGCNRFIKFGKLRAHLDASL 146 Query: 120 --GADYIATGHYVRRADVD------GKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVG 171 G ++ TGHY R + LLR + KDQSY+L + + P+G Sbjct: 147 GTGNYWLVTGHYSRVLQTESKALGLNSWHLLRAFYAPKDQSYYLSQVPSAALPALCLPMG 206 Query: 172 ELEKPQVRKIAEDLGLVTAKKKDSTGICFIGE---RKFREFLGRYLPAQPGKIITVDG-- 226 L KP+VR++A DL L TA K DS GICF+ K FL +Y+P+ G+IIT+D Sbjct: 207 VLTKPEVREMAHDLRLPTAHKPDSQGICFVANSQHGKISRFLEQYIPSHAGEIITLDPIT 266 Query: 227 ---DEIGEHQGLMYHTLGQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLM 283 E G H GL +T+GQ+ G+ + + W+V DK V+ N +V+ +G ++P L Sbjct: 267 GERTEWGRHTGLWNYTIGQKVGISMPQGDPRYQGAWFVADKRVDTNEIVICKGRDNPSLY 326 Query: 284 SVGLIAQQL------HWVDREPFTGTMRCTVKTRYRQTDIPCTV-------KALDDDRIE 330 ++ + + V + +YR P V + R+ Sbjct: 327 KNRVVLKDFSPLGNLNDVQEAVKNNLAGGAIHIQYRSLQEPAKVSRCCWETTEAGESRLV 386 Query: 331 VIFDEPVAAVTPGQSAVFYNGEVCLGGGII 360 + ++ A+ PGQ Y+ E LG G I Sbjct: 387 MTLEQKQRAMAPGQYCTIYHKERILGSGTI 416 >UniRef50_D1BVV4 tRNA(5-methylaminomethyl-2-thiouridylate)-methyl transferase n=2 Tax=Actinomycetales RepID=D1BVV4_XYLCX Length = 400 Score = 334 bits (856), Expect = 4e-90, Method: Composition-based stats. Identities = 129/386 (33%), Positives = 185/386 (47%), Gaps = 34/386 (8%) Query: 7 KVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDD----GEEYCTAAADLADAQAVC 62 +V+ MSGGVDS+V+A L + G+ V G+ M D G C + D +DA+ Sbjct: 2 RVLAAMSGGVDSAVAAALAVEAGHDVVGVHMALSRNRDQFRTGSRGCCSIEDASDARRAA 61 Query: 63 DKLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGAD 122 D LGI + + + + D V FLAEY+AGRTPNP + CN+ IKF+ LE A LG D Sbjct: 62 DVLGIPYYVWDLSERFEDTVVADFLAEYEAGRTPNPCVRCNEHIKFETLLEKAT-ALGFD 120 Query: 123 YIATGHYVRRADV-DGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGEL-EKPQVRK 180 +ATGHY R + DG L R ++ KDQSY L + E++A+++FP+G K +VR Sbjct: 121 AVATGHYARVVERPDGTRELHRSPNTEKDQSYVLAVMGPERLARAIFPLGGFASKAEVRA 180 Query: 181 IAEDLGLVTAKKKDSTGICFIGERKFREFLGRYLPAQPGKIITVDGDEIGEHQGLMYHTL 240 A GL + K DS ICF+ + R FL L ++PG+++ G +GEH G +T+ Sbjct: 181 EAARRGLAVSAKPDSYDICFVADGDTRGFLRDRLGSRPGEVVDTSGAVVGEHDGAYAYTV 240 Query: 241 GQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLHW------ 294 GQRKGL +G +P YV+D N +VV L + + W Sbjct: 241 GQRKGLALGRP-AADGKPRYVLDVRTSTNQVVVGPAE---LLTVDRIAGDRAVWFTDPAP 296 Query: 295 ----------------VDREPFTGTMRCTVKTRYRQTDIPCTVKALDDDRIEVIFD-EPV 337 V P + ++ R T +P + D +EV P+ Sbjct: 297 GPRASRDVGLPTPDTDVPGRPSSPVDDVEIQVRAHGTPVPARILDAADGGVEVELTGTPL 356 Query: 338 AAVTPGQSAVFYNGEVCLGGGIIEQR 363 V GQS V Y G LG + + Sbjct: 357 RGVAAGQSLVVYRGTQVLGQATVTRA 382 >UniRef50_C0QYI3 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase n=2 Tax=Brachyspira RepID=C0QYI3_BRAHW Length = 352 Score = 333 bits (855), Expect = 6e-90, Method: Composition-based stats. Identities = 118/364 (32%), Positives = 179/364 (49%), Gaps = 25/364 (6%) Query: 7 KVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDD---GEEYCTAA---ADLADAQA 60 K+ VGMS GVDS+ +A LL++QG V G+ M W D+ C + + + + Sbjct: 3 KIAVGMSAGVDSTTTAKLLKEQGNDVFGVTMLLWNGDERAPLSGSCYSPYQKNIVEECEK 62 Query: 61 VCDKLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAED-L 119 +GI+ + + + + V + YK G TPNP I+CN +IKF A E + L Sbjct: 63 YAKAIGIDYYAFDISEMFQKKVIDYVTESYKKGFTPNPCIMCNSQIKFMALFEAIEKQGL 122 Query: 120 GADYIATGHYVRR--ADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQ 177 D ATGHY + + LLRG + KDQSYFLY L+ +Q+++ +FP+ E K Sbjct: 123 EFDKFATGHYAGVKYDEKTKRYLLLRGKNLIKDQSYFLYRLTQDQLSKIMFPMHENTKED 182 Query: 178 VRKIAEDLGLVTAKKKDSTGICFIGERKFREFLGRYLPAQPGKIITVDGD-EIGEHQGLM 236 R IA + L A+K +S F R F + G II +D + +G H+G+ Sbjct: 183 TRNIAREYNLDVAEKSESQD--FFAGEYHRLF----DEDKEGSIINIDTNEILGHHKGIW 236 Query: 237 YHTLGQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLHWVD 296 ++T+GQRKGLGI +EP ++V D E N + V + + ++W+ Sbjct: 237 HYTVGQRKGLGI-----AYKEPLFIVALDSETNTVYVGNKNHT---FVNEVKIYDVNWIA 288 Query: 297 REPFTGTMRCTVKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTPGQSAVFYNGEVCLG 356 EP VKTR V +D++ I + F EP + GQS V Y+ ++ L Sbjct: 289 -EPKQKEFEALVKTRSAHKGTMAAVIPIDENTINIKFHEPTGIIAKGQSCVCYDNDITLC 347 Query: 357 GGII 360 GGI+ Sbjct: 348 GGIV 351 >UniRef50_B7AL92 Putative uncharacterized protein n=3 Tax=Bacteroides RepID=B7AL92_9BACE Length = 357 Score = 332 bits (851), Expect = 1e-89, Method: Composition-based stats. Identities = 119/356 (33%), Positives = 187/356 (52%), Gaps = 21/356 (5%) Query: 2 SETAKKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYCTAAADLADAQAV 61 ++ ++V++GMSGG DSSV+A L GY+V G+ + +E D EY L DA+A+ Sbjct: 8 MKSKERVLLGMSGGTDSSVAAMRLLDAGYEVTGVTFRFYEVDGRTEY------LDDARAL 61 Query: 62 CDKLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGA 121 +LGIE T + + + + F+ EY AG TP P LCN E+K+ A L A++ G Sbjct: 62 AARLGIEHVTYDAQELFRERIIRYFIDEYLAGHTPVPCTLCNNELKW-ALLARIADEKGI 120 Query: 122 DYIATGHYVRRADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQVRKI 181 +I+TGHY R+A + + + D +KDQ++FL+ L + + + L P+G++ K + R Sbjct: 121 YWISTGHYARKALLGEQCYIAPASDRDKDQTFFLWGLKQDILQRMLLPMGDVTKEEARAY 180 Query: 182 AEDLGLV-TAKKKDSTGICFIGERKFREFLGRYLP----AQPGKIITVDGDEIGEHQGLM 236 A G A KKDS G+CF +R FL R +P G I G+ +G H+G Sbjct: 181 AAGRGFARVASKKDSIGVCFCP-LDYRSFLKREVPAERLPGKGLFIGEKGEILGRHEGYP 239 Query: 237 YHTLGQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLHWVD 296 ++T+GQR+GLGI + +V + N +V+A L ++ + + V Sbjct: 240 FYTIGQRRGLGIHLNR-----AVFVKEVRTATNEVVLAP---LASLYKDEMLLKDWNLVS 291 Query: 297 REPFTGTMRCTVKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTPGQSAVFYNGE 352 + G VK RYR+ C V + D + V EP+ A+ PGQ+A FY+ + Sbjct: 292 EQRVLGMETVIVKIRYRKQANRCRVALMADGCLRVSLLEPLEAIAPGQAAAFYDAD 347 >UniRef50_A5FZD5 tRNA-specific 2-thiouridylase mnmA n=2 Tax=Proteobacteria RepID=MNMA_ACICJ Length = 345 Score = 329 bits (844), Expect = 8e-89, Method: Composition-based stats. Identities = 125/360 (34%), Positives = 182/360 (50%), Gaps = 23/360 (6%) Query: 7 KVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEY---CTAAADLADAQAVCD 63 +V+V MSGGVDSSV A L+ + G++V G+ ++ ++ C A D+ DA+ V D Sbjct: 2 RVVVAMSGGVDSSVVAGLMHEAGHEVIGVTLQLYDHGAATGRKGACCAGQDIHDARNVAD 61 Query: 64 KLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGADY 123 +LGI + ++ A + V F Y GRTP P + CN+ +KF L A DLGA+ Sbjct: 62 RLGIAHYVIDAEAAFRAAVIGDFAESYAEGRTPVPCVRCNQHLKFGDLL-GLARDLGAEA 120 Query: 124 IATGHYVRRADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELE-KPQVRKIA 182 +ATGHYVRR D + L R +D+ +DQS+FL+ + +Q+A S FP+G + K VR A Sbjct: 121 LATGHYVRREDGPEGAELHRAVDARRDQSWFLFATTRDQLAFSRFPLGTMPDKDAVRAEA 180 Query: 183 EDLGLVTAKKKDSTGICFIGERKFREFLGRYLP--AQPGKIITVDGDEIGEHQGLMYHTL 240 + L A+K DS ICF+ + + + + P A PG+I+T DG + HQG+ +T+ Sbjct: 181 ARMNLPVAEKPDSQDICFVPSGTYADIVAKLRPDAAAPGEIVTEDGAVLDRHQGIARYTV 240 Query: 241 GQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLHWVDREPF 300 GQ K LG V D +VV + + +W+ +P Sbjct: 241 GQAKRLGAASGHV-------VTRIDAARRRIVVGPRGAGG----REVRIAEPNWL-IDPP 288 Query: 301 TGTMRCTVKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTPGQSAVFYNGEVCLGGGII 360 R +VK R +T P + D R V D P A PGQ+ V Y LGGG I Sbjct: 289 AAPFRASVKLRAGETPHPAEI---DIARNLVTLDTPALA-APGQACVVYRESRVLGGGFI 344 >UniRef50_C9L0F1 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase n=1 Tax=Bacteroides finegoldii DSM 17565 RepID=C9L0F1_9BACE Length = 365 Score = 328 bits (842), Expect = 1e-88, Method: Composition-based stats. Identities = 126/380 (33%), Positives = 199/380 (52%), Gaps = 33/380 (8%) Query: 1 MSETAKKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYCTAAADLADAQA 60 M E ++V++GMSGG DSSV+A L + GY+V G+ + +E +D EY L DA++ Sbjct: 1 MIEENRRVLLGMSGGTDSSVAAMRLLEGGYEVTGITFRFYELNDSTEY------LEDARS 54 Query: 61 VCDKLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLG 120 + ++LGI T + + + E F+ EY GRTP P LCN +K+ L A+++G Sbjct: 55 LAERLGIRHITYDARDVFRKQIIEYFVQEYMEGRTPVPCTLCNNCLKWP-LLAKVADEMG 113 Query: 121 ADYIATGHYVRRADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQVRK 180 YIATGHYV++ +++G + D +KDQS+FL+ L + + + L P+G + K + R Sbjct: 114 IFYIATGHYVQKVELEGTYYITHAADPDKDQSFFLWGLKQDILRRILLPMGNITKVEARV 173 Query: 181 IAEDLGL-VTAKKKDSTGICFIGERKFREFLGRYLP----------------AQPGKIIT 223 A + G A KKDS G+CF +R FL +L + G+ + Sbjct: 174 WAAERGFQKVATKKDSIGVCFCP-MDYRSFLKEWLARNGQLRSENVSCWSEMVRRGRFVD 232 Query: 224 VDGDEIGEHQGLMYHTLGQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLM 283 G+ IG H+G ++T+GQR+GLGI + P +V + E N +V++ L Sbjct: 233 EKGNFIGWHEGYPFYTIGQRRGLGIHLNR-----PVFVKEIYPEKNEVVLSS---LSALE 284 Query: 284 SVGLIAQQLHWVDREPFTGTMRCTVKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTPG 343 + + + V+ + G VK RYR+ + CTV D+ + + EP+ A+ G Sbjct: 285 KTEMQLKDWNLVNPQKILGYNDVIVKIRYRKQENHCTVTVTPDNLLHIQLHEPLTAIAAG 344 Query: 344 QSAVFYNGEVCLGGGIIEQR 363 Q+A FY + LGGGII Sbjct: 345 QAAAFYRDGLLLGGGIIVNA 364 >UniRef50_D2NS67 Predicted tRNA methyltransferase n=4 Tax=Actinomycetales RepID=D2NS67_9MICC Length = 407 Score = 328 bits (840), Expect = 3e-88, Method: Composition-based stats. Identities = 127/393 (32%), Positives = 187/393 (47%), Gaps = 38/393 (9%) Query: 7 KVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKN----WEEDDGEEYCTAAADLADAQAVC 62 K++ MSGGVDS+V+A + G++V G+ + G C D DA+ VC Sbjct: 2 KILAAMSGGVDSAVAAARAVEAGHEVVGVHLALSRMPGTLRTGSRGCCTLEDSMDARRVC 61 Query: 63 DKLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGAD 122 +LGI +F+ + ++V + F++EY+AGRTPNP + CN++IKF A L A LG D Sbjct: 62 SQLGIPFFVWDFSERFKEDVVDDFISEYEAGRTPNPCMRCNEKIKFAA-LLERALALGFD 120 Query: 123 YIATGHYVRR-ADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGEL-EKPQVRK 180 + TGHY R DG L R D KDQSY L L+HEQ+ + FP+ + K QVR Sbjct: 121 AVVTGHYARVITTEDGNRELHRAADWAKDQSYVLGVLTHEQLKHAWFPLADTPSKAQVRA 180 Query: 181 IAEDLGLVTAKKKDSTGICFIGERKFREFLGRYLPAQPGKIITVDGDEIGEHQGLMYHTL 240 A + G AKK DS ICFI E R +LG ++ +PG I G+ +GEH G +T+ Sbjct: 181 EAAERGFSVAKKPDSYDICFIPEGDTRAWLGDHITMRPGLIKDTHGEVLGEHPGAQAYTV 240 Query: 241 GQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLHW------ 294 GQRKGL +G +P +V++ + N ++V L + + W Sbjct: 241 GQRKGLALGRP-AADGKPRFVLEVRPKENEVIVGSRE---LLAVHEIRGIRATWAGVPVE 296 Query: 295 ----VDREP-----FTGTMRCTVKTRYRQTDIPCTV--------KALDDDRIE----VIF 333 EP + T + R + +A ++ + V Sbjct: 297 QAARFLEEPAQLGARSEEFEVTAQVRAHADPVRAKAYMTWAPDPEAEEEGTLRLETVVRL 356 Query: 334 DEPVAAVTPGQSAVFYNGEVCLGGGIIEQRLPL 366 +P++ V PGQ+ V Y G LG I + L Sbjct: 357 LDPLSGVAPGQTMVLYQGTRVLGQSTIARAYSL 389 >UniRef50_Q2LVR6 tRNA-specific 2-thiouridylase mnmA 2 n=1 Tax=Syntrophus aciditrophicus SB RepID=MNMA2_SYNAS Length = 342 Score = 327 bits (839), Expect = 3e-88, Method: Composition-based stats. Identities = 130/358 (36%), Positives = 187/358 (52%), Gaps = 42/358 (11%) Query: 33 EGLFMKNWEEDDGEEYCTAAADLADAQAVCDKLGIELHTVNFAAEYWDNVFELFLAEYKA 92 EGL + N + + A A+ +LGI LH + + + + + EY Sbjct: 2 EGLHIFNGF---------SGSSEARARHAAHQLGIPLHVADVTETFDEEIVQYLTREYLV 52 Query: 93 GRTPNPDILCNKEIKFKAFLEFAAEDLGADYIATGHYVRRAD--VDGKSRLLRGLDSNKD 150 RTPNP ++CN++IKFK L +A + L ++ATGHY R G+ LLRGLD KD Sbjct: 53 ARTPNPCVVCNRKIKFKTLLYYA-DRLACHFVATGHYARVFHNRQTGRYALLRGLDQAKD 111 Query: 151 QSYFLYTLSHEQIAQSLFPVGELEKPQVRKIAEDLGLVTAKKKDSTGICFIGERKFREFL 210 QSYFL+ L EQ+++ LFP+GEL K +VR +A +G+ ++K+S ICFI + ++ F+ Sbjct: 112 QSYFLFLLGQEQLSRILFPLGELTKKEVRSVALTMGVEAVREKESQEICFIPDDDYKTFI 171 Query: 211 GRYL---PAQPGKIITVDGDEIGEHQGLMYHTLGQRKGLGIGGTKEGTEEPWYVVDKDVE 267 R++ PA PG I+ G +G H G+ T+GQRKGL I P+YV+ D E Sbjct: 172 ERHMGSSPAIPGDIVDRSGRLLGSHNGIHSFTIGQRKGLHI-----AAPRPYYVLAIDRE 226 Query: 268 NNILVVAQGHEHPRLMSVGLIAQQLHWVDRE-PFTGTMRCTVKTRYRQTDI--------- 317 N +VV E GLI + W+D E P V+ RYR + Sbjct: 227 KNRVVVGHEEEQGF---SGLIVSGVSWIDGESPREEVFETLVRIRYRHRGVSSVVCPLSA 283 Query: 318 -----PCTVKALDD----DRIEVIFDEPVAAVTPGQSAVFYNGEVCLGGGIIEQRLPL 366 P T + D D++ + F EP AV PGQ+AVFY+ + +GGG IEQ +PL Sbjct: 284 GDEICPATGRPADHEEAGDKLIIRFQEPQRAVAPGQAAVFYSDDRVIGGGWIEQGIPL 341 >UniRef50_A6NQI9 Putative uncharacterized protein n=1 Tax=Bacteroides capillosus ATCC 29799 RepID=A6NQI9_9BACE Length = 342 Score = 327 bits (839), Expect = 4e-88, Method: Composition-based stats. Identities = 121/354 (34%), Positives = 183/354 (51%), Gaps = 21/354 (5%) Query: 9 IVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYCTAAADLADAQAVCDKLGIE 68 ++G+SGGVDS+V+A LL + Y+V GL++ G+ ADA AV +L I Sbjct: 1 MLGLSGGVDSAVAAQLLSR-DYEVHGLYLDIGLGGTGQ---------ADAAAVAHRLDIP 50 Query: 69 LHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGADYIATGH 128 HT + E + V F A+Y AGRTP P CN +KF A L AE++GA+ +ATGH Sbjct: 51 FHTADIRQELENQVCGPFAADYLAGRTPLPCARCNPTVKFPALL-ALAEEIGAEKVATGH 109 Query: 129 YVRRADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQVRKIAEDLGLV 188 Y R A LLR DQSY L L + + +FP+G+ EK VR +A L Sbjct: 110 YARTALAPDGRVLLRKGLPANDQSYMLSRLPQNILQKVIFPLGDYEKTAVRAMAGQAELP 169 Query: 189 TAKKKDSTGICFIGERKFREFLGRYLPAQP-GKIITVDGDEIGEHQGLMYHTLGQRKGLG 247 A K DS ICFI + + +L P G + DG +G H G+ +TLGQ +GLG Sbjct: 170 VADKPDSMEICFIPDGDYAAWLEHRGTVPPAGDFVDRDGRVLGRHGGIHRYTLGQGRGLG 229 Query: 248 IGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLHWVDREPFTGTMRCT 307 + G + +YV + D ++ +V++ G + LM+ + ++W+ + + T Sbjct: 230 VSGPHK-----YYVTEIDPAHDRVVLSDGSD---LMARRVYCADMNWLSVDGLPEPLEVT 281 Query: 308 VKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTPGQSAVFYNGEVCLGGGIIE 361 V+ R+ +T++ +A ++ + + D P A TPGQ AV Y G++ G I Sbjct: 282 VRLRHSKTELAAVARADGENVVLEMLD-PARAPTPGQLAVLYQGDIVAASGWIT 334 >UniRef50_A8ES35 tRNA-specific 2-thiouridylase mnmA 1 n=5 Tax=Epsilonproteobacteria RepID=MNMA1_ARCB4 Length = 345 Score = 327 bits (839), Expect = 4e-88, Method: Composition-based stats. Identities = 117/365 (32%), Positives = 192/365 (52%), Gaps = 27/365 (7%) Query: 4 TAKKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYCTAAADLADAQAVCD 63 + KKV+VGMSGG+DSSV+A++LQ +GY+VEG+++K DG +L + V Sbjct: 2 SKKKVMVGMSGGIDSSVTAYMLQNEGYEVEGIYLKLHNRTDGYH----EKNLGYIEDVAK 57 Query: 64 KLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGADY 123 L I+ + ++ A ++ V++ F+ Y G TPNP + CN++IKF A L+FA + GA Y Sbjct: 58 FLNIKYYILDLADKFSKEVYDYFVDSYLTGTTPNPCVKCNRQIKFGAMLDFA-KQHGASY 116 Query: 124 IATGHYVRRADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQVRKIAE 183 +ATGHY D KDQSYFL + + + +FP+ +K + K Sbjct: 117 LATGHYA----KTDGKFFYEADDKTKDQSYFLSQVDKDALKYMMFPLSTYKKEDIVKFGA 172 Query: 184 DLGLV---TAKKKDSTGICFIGERKFREFLGRYLP-AQPGKIITVDGDEIGEHQGLMYHT 239 L + +K +S ICF+ E + + + ++ Q G ++ +G +G+H+G ++T Sbjct: 173 KLDVAYKKITEKSESQEICFV-ETVYTDVVKKHANIDQEGDVLDENGKVVGKHKGFAHYT 231 Query: 240 LGQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLH-WVDRE 298 +G+R+G + +G +EP +V + ++N +VV + L ++ L+ ++D Sbjct: 232 IGKRRGFTV----KGAQEPHFVTKLNPKDNTIVVGKKE---ALEVNEVVGNNLNMFID-- 282 Query: 299 PFTGTMRCTVKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTPGQSAVFYNGEVCLGGG 358 C VK RYR PC V+ D+ + + EPV V GQ AVFY+ E +G Sbjct: 283 --DTKFSCNVKLRYRSVSTPCEVQIKDE-KAYITLKEPVYGVAKGQLAVFYHEEKVIGSA 339 Query: 359 IIEQR 363 IE Sbjct: 340 WIEST 344 >UniRef50_Q313S6 tRNA-specific 2-thiouridylase mnmA n=7 Tax=Desulfovibrionales RepID=MNMA_DESDG Length = 356 Score = 326 bits (836), Expect = 7e-88, Method: Composition-based stats. Identities = 125/366 (34%), Positives = 167/366 (45%), Gaps = 21/366 (5%) Query: 7 KVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYCTAAADLADAQAVCDKLG 66 + V +SGG DS + + + G+QV L D E T A + + C LG Sbjct: 2 HIAVAVSGGTDSLFALLQVLEAGHQVTALHAHFLSPHDTPE--TTAHNTQAIEKACRALG 59 Query: 67 IELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGADYIAT 126 + H + +A + +V E F+ Y+ GRTPNP CN +KF L A LGA IAT Sbjct: 60 ADFHVEDLSAAFRKHVIEPFIDAYRQGRTPNPCARCNASMKFG-LLADTARKLGAQAIAT 118 Query: 127 GHYVRRADV----DGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQVRKIA 182 GHY R L RG D KDQSYFL + ++A ++FP+G K VR Sbjct: 119 GHYARLQPDLPRPGNTVSLWRGDDPAKDQSYFLSLVPQHRLACAVFPLGGWRKQDVRAHL 178 Query: 183 EDLGLVTAKKKDSTGICFIGERKFREFLGRYLPAQP--GKIITVDGDEIGEHQGLMYHTL 240 + G+V +S ICFI +R +L + P G ++ DG +G H GL +T Sbjct: 179 KQRGIVPPLPSESQEICFIPGDDYRAYLTAHAAGLPGAGPMVLRDGHVVGHHNGLWQYTE 238 Query: 241 GQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLHWVDREPF 300 GQR+GLGI EP YV++KDV N LVV + L + G ++ + P Sbjct: 239 GQRRGLGI-----AWSEPLYVLEKDVSRNALVVGTRKQ---LTARGCRCVGVNTLVP-PD 289 Query: 301 TGTMRCTVKTRYRQTDIPCTVKA--LDDDRIEVIFDEPVAAVTPGQSAVFYN-GEVCLGG 357 VKTRYRQT I V D + VIF GQ A Y+ L G Sbjct: 290 QWPDAVYVKTRYRQTMIAAQVTPDADGADTMRVIFAASHTPPAAGQVAAVYDAAGRVLAG 349 Query: 358 GIIEQR 363 GII Sbjct: 350 GIIASV 355 >UniRef50_Q5K850 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase, putative n=2 Tax=Filobasidiella neoformans RepID=Q5K850_CRYNE Length = 478 Score = 326 bits (835), Expect = 1e-87, Method: Composition-based stats. Identities = 123/408 (30%), Positives = 204/408 (50%), Gaps = 53/408 (12%) Query: 2 SETAKKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWE-------------------- 41 V VGMSGGVDS+ + +L++ ++ +FM+NW+ Sbjct: 66 LREGDHVTVGMSGGVDSATTLRILREFPIHLDVVFMRNWDPLLSESPPESSLPPSPISLA 125 Query: 42 --------EDDGEEYCTAAADLADAQAVCDKLGIE---LHTVNFAAEYWDNVFELFLAEY 90 + C D D V ++GI + V+ + EYW VFE + + Sbjct: 126 YSSGSTSNREQNLSPCQWERDWNDVLKVATQVGIPKDSIKLVDLSKEYWSRVFEPAVGVW 185 Query: 91 KAGRTPNPDILCNKEIKFKAFLEFAAEDLGADYIATGHYVRRAD-----VDGKSRLLRGL 145 + G TPNPD+ CN+EIKF A L+ + ++ATGHY R A G S+LLR + Sbjct: 186 ERGGTPNPDVDCNREIKFGALLDVLPKK-DRHFLATGHYGRVAHVPLLSHPGPSKLLRAV 244 Query: 146 DSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQVRKIAEDLGLVTAKKKDSTGICFIGER- 204 D +KDQ+Y+L ++ +Q+++++ P+G L K VR++AE GL AKK++S G+CFIGER Sbjct: 245 DKSKDQTYYLSQMTEQQLSRAILPLGSLLKTDVRRLAEHWGLPNAKKEESMGVCFIGERG 304 Query: 205 KFREFLGRYL-PAQPGKIITVDGDEIGEHQGLMYHTLGQRKGLGIGGTKEGTEEPWYVVD 263 KF +F+ +Y P + G ++ + G+ + EH+GL Y+T+GQR + +P +V Sbjct: 305 KFGDFISQYTSPPESGYLVNLSGERLAEHKGLWYYTIGQRARVANQL------KPMFVAK 358 Query: 264 KDVENN--ILVVAQGHEHPRLMSVGLIAQQLHWVDREPF-----TGTMRCTVKTRYRQTD 316 K V ++V G +HP L+ + HW+ + ++ R+R Sbjct: 359 KGVGEKGTDILVVPGSDHPMLLCKSVHTSDFHWIHDTFPRELLVKEPEKVGIQVRHRMNP 418 Query: 317 IPCTVKALDD-DRIEVIFDEPVAAVTPGQSAVFYNGEVCLGGGIIEQR 363 + + + + V F++P+ V+PGQ ++ CLG G+I+ Sbjct: 419 VGGRIVVGGNVKDVTVEFNDPIVGVSPGQVVAIWHDGWCLGSGVIDGT 466 >UniRef50_C7LUQ7 tRNA(5-methylaminomethyl-2-thiouridylate)-methyl transferase n=1 Tax=Desulfomicrobium baculatum DSM 4028 RepID=C7LUQ7_DESBD Length = 347 Score = 323 bits (829), Expect = 6e-87, Method: Composition-based stats. Identities = 123/360 (34%), Positives = 171/360 (47%), Gaps = 22/360 (6%) Query: 7 KVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYCTAAADLADAQAVCDKLG 66 K + +SGG DS +S LL++ G +V + + DD + +C KL Sbjct: 3 KTAIALSGGADSLMSLLLLRETGAEVMAVHARFLGADDEALH-------ERLHGLCAKLR 55 Query: 67 IELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGADYIAT 126 + H V+ E+ + V F+ Y++G TPNP CN IKF L+ +LGAD +AT Sbjct: 56 VPFHLVDLRREFEELVIAPFVRAYQSGLTPNPCATCNPAIKFGLLLDRV-RELGADRLAT 114 Query: 127 GHYVRRADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQVRKIAEDLG 186 GHY R A + L RGLD++KDQSYFL + E+ Q +FP+ + K VR+ + G Sbjct: 115 GHYARLARTPHGAALYRGLDADKDQSYFLSRVPRERFEQVIFPLADWTKSAVRQALAERG 174 Query: 187 LVTAKKKDSTGICFIGERKFREFLGRYLP--AQPGKIITVDGDEIGEHQGLMYHTLGQRK 244 L ++S +CFI +R+FL PG I DG +G H GL HTLGQRK Sbjct: 175 LTPPAGRESQEVCFIP-SDYRDFLRERNVRLGGPGPITLADGTVLGRHAGLWNHTLGQRK 233 Query: 245 GLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLHWVDREPFTGTM 304 GLGI +P YV KD N L+V E +S G + + Sbjct: 234 GLGI-----AYSQPLYVTGKDFVQNRLLVGPKSET---LSSGCRTGIPNLLWPPEL-WPG 284 Query: 305 RCTVKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTPGQSAVFYN-GEVCLGGGIIEQR 363 +T YRQ P V +D + + F EP TPGQ A Y+ L G +IE+ Sbjct: 285 EILAQTIYRQRPEPARVS-VDQTGMTITFPEPRPMPTPGQVAAVYSAEGQVLAGAVIEEA 343 >UniRef50_Q9ZJQ0 tRNA-specific 2-thiouridylase mnmA n=22 Tax=Campylobacterales RepID=MNMA_HELPJ Length = 342 Score = 322 bits (825), Expect = 1e-86, Method: Composition-based stats. Identities = 126/359 (35%), Positives = 194/359 (54%), Gaps = 24/359 (6%) Query: 7 KVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYCTAAADLADAQAVCDKLG 66 K+ V +SGGVDSS SA+ L++QG+++ G+++K + + + +AQ C+ LG Sbjct: 2 KIAVLLSGGVDSSYSAYSLKEQGHELVGIYLKLHASEKKHDLY-----IKNAQKACEFLG 56 Query: 67 IELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGADYIAT 126 I L ++F ++ V++ F+ Y+ G+TPNP LCN +KF L+ A LG + IAT Sbjct: 57 IPLEVLDFQKDFKSAVYDEFINAYEEGQTPNPCALCNPLMKFGLALDHAL-KLGCEKIAT 115 Query: 127 GHYVRRADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQVRKIAED-- 184 GHY R ++D S + LD KDQSYFLY L HE IA+ +FP+G+L K ++ +A + Sbjct: 116 GHYARVKEIDKVSYIQEALDKTKDQSYFLYALEHEVIAKLVFPLGDLLKKDIKPLALNAM 175 Query: 185 --LGLVTAKKKDSTGICFIGERKFREFLGRYLP-AQPGKIITVDGDEIGEHQGLMYHTLG 241 LG K+S ICF+ E+ + + L +++ + G + + G+ IG H+G M +T+G Sbjct: 176 PFLG-TLETYKESQEICFV-EKSYIDTLKKHVEVEKEGVVKNLQGEVIGTHKGYMQYTIG 233 Query: 242 QRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLHWVDREPFT 301 +RKG + G EP +VV D + N L+V + + L + L A+ Sbjct: 234 KRKGFSVKGAL----EPHFVVGIDAKKNELIVGKKED---LATHSLKAKNKSLTKD---F 283 Query: 302 GTMRCTVKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTPGQSAVFYNGEVCLGGGII 360 +K RYR V D IEV F EP V GQ+ V Y ++ LGGG+I Sbjct: 284 KDGEYFIKARYRSVPTKAFVSLKD-GMIEVEFKEPFYGVAKGQALVVYKDDILLGGGVI 341 >UniRef50_C7GYK6 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase n=1 Tax=Eubacterium saphenum ATCC 49989 RepID=C7GYK6_9FIRM Length = 348 Score = 321 bits (824), Expect = 2e-86, Method: Composition-based stats. Identities = 113/363 (31%), Positives = 183/363 (50%), Gaps = 30/363 (8%) Query: 5 AKKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYCTAAADLADAQAVCDK 64 KV VG SGGVDS+ + LL+++GY V ++++ E A D+++ + + + Sbjct: 7 KTKVAVGFSGGVDSTAACLLLKEKGYDVHPVYLRMGE----------AEDISELKKIAND 56 Query: 65 LGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGADYI 124 +G+EL ++ + ++V + F Y G TPNP I+CN +KF+ ++FA +D G D I Sbjct: 57 IGLELKVLDLTDRFNNSVVDNFKKAYMNGMTPNPCIVCNPLVKFRGLMDFA-DDNGIDLI 115 Query: 125 ATGHYVRRADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGEL-EKPQVRKIAE 183 ATGHY R L RG ++ KDQSY LY L + + P+GE K +R I Sbjct: 116 ATGHYARIVKNGDNPVLCRGRNAQKDQSYMLYGLDSNVFERLILPLGEYGNKEDIRNILR 175 Query: 184 DLGLVTAKKKDSTGICFIG-ERKFREFLGRYLPAQPGKIITVDGDEIGEHQGLMYHTLGQ 242 ++ ++K DS ICF+ + +++F P + G+ + +G+ +G H+G+ T+GQ Sbjct: 176 TNEIINSEKPDSQEICFLKQDESYKKF----FPEREGEFVDAEGNILGRHRGIHNFTVGQ 231 Query: 243 RKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLHWVDREPFTG 302 RKGLGI +P YV+ N +++ E L + ++ + Sbjct: 232 RKGLGI-----TFSKPMYVLGIAASTNRVMLGSEEE---LYKERATITDMKYLGNDISKC 283 Query: 303 TMRCT-----VKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTPGQSAVFYNGEVCLGG 357 T K RY + L +E++F+EPV A+ PGQS V Y +V + G Sbjct: 284 TDDAHKGLYRAKVRYSSAEYEIKEINLKGSDLEIVFNEPVRAIAPGQSLVVYCRDVVILG 343 Query: 358 GII 360 GII Sbjct: 344 GII 346 >UniRef50_Q8R5Z5 tRNA-specific 2-thiouridylase mnmA 2 n=12 Tax=Fusobacterium RepID=MNMA2_FUSNN Length = 343 Score = 321 bits (824), Expect = 2e-86, Method: Composition-based stats. Identities = 120/360 (33%), Positives = 190/360 (52%), Gaps = 22/360 (6%) Query: 6 KKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYCTAAADLADAQAVCDKL 65 KKV++GMSGGVDSSVSA+LL++QGY+V G+ + E++ D+ D + VCDKL Sbjct: 2 KKVVIGMSGGVDSSVSAYLLKEQGYEVIGITLNQHLEENS-------KDIEDTKKVCDKL 54 Query: 66 GIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGADYIA 125 GI VN ++ + V + FL Y +G+TP+P I+C+ EIKFK + A+ A+Y+A Sbjct: 55 GIIHEVVNIRKDFENIVIKYFLEGYNSGKTPSPCIICDDEIKFKILFD-IADKYNAEYVA 113 Query: 126 TGHYVRRADVD--GKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQVRKIAE 183 TGHY + K L KDQSY LY LS +++ + +FP+ + K ++R+IA Sbjct: 114 TGHYTSVEYSEVFSKYLLKSVHSIIKDQSYMLYRLSPDKLERLIFPLKDYSKQEIREIAL 173 Query: 184 DLGLVTAKKKDSTGICFIGERKFREFLGRYLPAQ--PGKIITVDGDEIGEHQGLMYHTLG 241 + L KKDS G+CF E ++EFL L + G I +G+ +G+H+G +T+G Sbjct: 174 KIDLEVHDKKDSQGVCFAKEG-YKEFLKENLRDEIVRGNFIDKNGNILGQHEGYQLYTIG 232 Query: 242 QRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLHWVDREPFT 301 QR+GLGI +P ++ + + N +V+ + E L + + Sbjct: 233 QRRGLGINL-----SKPVFITEIKAQTNDIVLGEFSE---LFIDKVELINSKFSVEYEKL 284 Query: 302 GTMRCTVKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTPGQSAVFYNGEVCLGGGIIE 361 + + R+ T + D ++I ++E A GQ VF+ +GGG I+ Sbjct: 285 ENLELLARPRFSSTGFYGKLIK-DKNKIYFKYNEENAHNAKGQHIVFFYDGFVVGGGEIK 343 >UniRef50_B1VFZ9 tRNA-specific 2-thiouridylase mnmA n=65 Tax=Bacteria RepID=MNMA_CORU7 Length = 406 Score = 321 bits (823), Expect = 2e-86, Method: Composition-based stats. Identities = 131/385 (34%), Positives = 197/385 (51%), Gaps = 34/385 (8%) Query: 7 KVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDD----GEEYCTAAADLADAQAVC 62 +V+ MSGGVDS+V+A + G++V G+ + + + G C + D ADA+ V Sbjct: 2 RVVAAMSGGVDSAVAAARALEAGHEVIGVHLALSQSPEAVRAGSRGCCSLEDSADARRVA 61 Query: 63 DKLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGAD 122 DKLGI + +F+ + +V + F+ Y G TPNP + CN++IKF+A L+ + LG D Sbjct: 62 DKLGIPFYVWDFSDRFKADVIDNFVDSYAIGETPNPCLRCNEKIKFEALLDRSI-ALGFD 120 Query: 123 YIATGHYVRRADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQVRKIA 182 + TGHY + D L RG+D++KDQSY L L+ EQ+A +FPVG+ KP++R+ A Sbjct: 121 AVVTGHYAQLHDG----VLRRGVDADKDQSYVLGVLTDEQLAHCMFPVGDTVKPEIREEA 176 Query: 183 EDLGLVTAKKKDSTGICFIGERKFREFLGRYLPAQPGKIITVDGDEIGEHQGLMYHTLGQ 242 D G A K DS ICFI + + + FLG + +PG + G+ + EH G+ T+GQ Sbjct: 177 ADAGFGVANKPDSHDICFIPDGRTQAFLGSKIGLRPGLVRDTGGETVAEHDGVYGFTVGQ 236 Query: 243 RKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLHWVDREPFTG 302 RKGLG+ + P YV D D + V + L G+IA +L +D E Sbjct: 237 RKGLGLPR-ETLDGRPRYVTDIDAHTGTVTVGTRED---LRVGGIIADRLKRLDPEVHGR 292 Query: 303 TMRCTVKTRYRQTDIPCTVKALDD-------DRIEVIFDEPVA----------AVTPGQS 345 C V+ R +P + +DD R++ + P V GQ+ Sbjct: 293 EFDCEVQVRAHGGVVPARARLVDDPTPVTPAGRVKEADELPWRLELELLQPLEGVARGQA 352 Query: 346 AVFY----NGEVCLGGGIIEQRLPL 366 AV Y +G++ LG G I L Sbjct: 353 AVVYRPDEDGDILLGSGTIRATTAL 377 >UniRef50_Q7U320 tRNA-specific 2-thiouridylase mnmA n=3 Tax=Helicobacteraceae RepID=MNMA_HELHP Length = 345 Score = 321 bits (823), Expect = 3e-86, Method: Composition-based stats. Identities = 126/362 (34%), Positives = 193/362 (53%), Gaps = 24/362 (6%) Query: 7 KVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYCTAAADLADAQAVCDKLG 66 KV + MSGGVDSS A LL QGY+V G+++K +++ + +A+ + V L Sbjct: 2 KVALLMSGGVDSSYCAHLLSSQGYEVIGIYLKLHDKNKKHDIY-----IANCEQVAAHLH 56 Query: 67 IELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGADYIAT 126 I+ ++ E+ +V++ F++ YK G+TPNP +CN +KF L+ A +LG DYIAT Sbjct: 57 IDFQVLDLREEFKKSVYDTFVSSYKEGKTPNPCAICNPLMKFGLGLQKAL-ELGCDYIAT 115 Query: 127 GHYVRRADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQVRKIAEDLG 186 GHY + +V+G R+ + +D +KDQSYFLY L E I + +FP+G L K ++K A +L Sbjct: 116 GHYAQIKEVNGIKRIAKAVDESKDQSYFLYALPQEAIDRIIFPLGALLKEDIKKTALEL- 174 Query: 187 LVT----AKKKDSTGICFIGERKFREFLGRYLP-AQPGKIITVDGDEIGEHQGLMYHTLG 241 L K+S ICF+ E+ + + L + G + +G IG H+G M++T+G Sbjct: 175 LPFLGTLQTYKESQEICFV-EQSYIDILKLHDKVDNEGVVRNSNGKAIGTHKGYMHYTIG 233 Query: 242 QRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLHWVDREPFT 301 +RKG + G+ EP YV + +NN +VV E L + A L+ + F Sbjct: 234 KRKGFSVF----GSHEPHYVKAINPQNNEIVVGTKEE---LAIDSIKA--LNKSLPQAFN 284 Query: 302 GTMRCTVKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTPGQSAVFYNGEVCLGGGIIE 361 G + VK RYR T + + + I E V GQ+ V Y + LGGG+I Sbjct: 285 GGI-YDVKVRYRSTPLKAQIDIQGE-FIYAKLLESAYGVAQGQALVLYQEDCVLGGGVIT 342 Query: 362 QR 363 Q Sbjct: 343 QA 344 >UniRef50_C7QYX8 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase n=13 Tax=Actinomycetales RepID=C7QYX8_JONDD Length = 423 Score = 321 bits (822), Expect = 3e-86, Method: Composition-based stats. Identities = 121/420 (28%), Positives = 186/420 (44%), Gaps = 64/420 (15%) Query: 7 KVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNW----EEDDGEEYCTAAADLADAQAVC 62 +V+ MSGGVDS+V+A L + G+ V G+ M + G C + D +DA+ Sbjct: 2 RVLAAMSGGVDSAVAAALAVEAGHDVVGVHMALSRNRNQFRSGSRGCCSIEDASDARRAA 61 Query: 63 DKLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGAD 122 D LGI + + + ++ D V F++EY+AGRTPNP + CN+ IKF+A L+ A LG D Sbjct: 62 DILGIPYYVWDLSEKFEDTVVADFISEYEAGRTPNPCVRCNEHIKFEALLDKAM-ALGFD 120 Query: 123 YIATGHYVRRADVD---------GKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGEL 173 +ATGHY + D D L R + KDQSY L + +++ ++FP+G Sbjct: 121 AVATGHYAQIIDRDTTDVHGQPTVIRELHRSPNDAKDQSYVLAVMGPDRLKNAIFPLGGY 180 Query: 174 -EKPQVRKIAEDLGLVTAKKKDSTGICFIGERKFREFLGRYLPAQPGKIITVDGDEIGEH 232 K +VR AE GL + K DS ICF+ + + FL L ++PG+++ DG+ +G H Sbjct: 181 ASKDEVRAEAERRGLSVSNKPDSYDICFVADGDTKGFLRDRLGSRPGEVLDTDGNVVGTH 240 Query: 233 QGLMYHTLGQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQL 292 G +T+GQRKGL +G +P YV+ +N ++V L ++ + Sbjct: 241 DGAYAYTVGQRKGLALGRP-AEDGKPRYVLGVSTRDNTVIVGP---SELLSVNRIVGDKA 296 Query: 293 HWVDREPFTGT---------MRCTVKTRYRQTDIPCTVKALDDDRIE------------- 330 W + T + R +P + + DR Sbjct: 297 VWFATDILTDASLTTEGSDWFAIEGQVRAHGAALPGRARIVPLDRARDLMPAGREELAAE 356 Query: 331 ------------------VIFDEPVAAVTPGQSAVFYNGEVCLGGGII-----EQRLPLP 367 V P+ V GQS V Y G +G + + LP P Sbjct: 357 CTRVEGADPGHDHTALVEVELQSPLRGVAAGQSIVLYRGTRVIGQATVVASDRKATLPTP 416 >UniRef50_B2GL48 tRNA-specific 2-thiouridylase mnmA n=6 Tax=Micrococcineae RepID=MNMA_KOCRD Length = 383 Score = 321 bits (822), Expect = 3e-86, Method: Composition-based stats. Identities = 127/378 (33%), Positives = 180/378 (47%), Gaps = 26/378 (6%) Query: 7 KVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKN----WEEDDGEEYCTAAADLADAQAVC 62 +V+ MSGGVDS+V+A G++V G+ + G C D DA Sbjct: 2 RVLAAMSGGVDSAVAAARAVDAGHEVTGVHLALSRTPGTLRTGARGCCTIEDSRDAWRAA 61 Query: 63 DKLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGAD 122 +KLGI + +F+ + +V + F+AEY AGRTPNP + CN++IKF A L A LG D Sbjct: 62 EKLGIPYYVWDFSERFQADVVDDFVAEYAAGRTPNPCMRCNEKIKFAA-LLEKALALGFD 120 Query: 123 YIATGHYVRRADV-DGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGEL-EKPQVRK 180 + TGHY + + DG L R D KDQSY L L+ EQ+ ++FP+ E K QVR Sbjct: 121 AVCTGHYAKVVEGPDGHKELHRAADWAKDQSYVLGVLTAEQLEHAIFPLAETPSKAQVRA 180 Query: 181 IAEDLGLVTAKKKDSTGICFIGERKFREFLGRYLPAQPGKIITVDGDEIGEHQGLMYHTL 240 AE+ GL A K DS ICFI + R +L ++ PG+I+ +G+E+GEH+G +T+ Sbjct: 181 EAEERGLSVATKPDSHDICFIPDGDTRGWLADHMDLDPGRIVDTEGNELGEHRGAQAYTV 240 Query: 241 GQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLHWVDREPF 300 GQR+GL IG +P +V++ + N +VV L + + W P Sbjct: 241 GQRRGLHIGRPAP-DGKPRFVLEIRPKTNEVVVGPE---QLLAIDVMEGIRPSWAGLPPR 296 Query: 301 T------------GTMRCTVKTRYRQTDIPCTVKAL---DDDRIEVIFDEPVAAVTPGQS 345 TV+ R P R+ V D V PGQ+ Sbjct: 297 EVAALGADPKARSEEFEVTVQVRAHGDPAPARAWLTRSEGTPRLHVRLDTAQRGVAPGQT 356 Query: 346 AVFYNGEVCLGGGIIEQR 363 V Y G LG I+ Sbjct: 357 MVLYQGTRVLGQATIDAA 374 >UniRef50_C0GTF7 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase n=1 Tax=Desulfonatronospira thiodismutans ASO3-1 RepID=C0GTF7_9DELT Length = 344 Score = 320 bits (821), Expect = 4e-86, Method: Composition-based stats. Identities = 119/362 (32%), Positives = 180/362 (49%), Gaps = 26/362 (7%) Query: 7 KVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYCTAAADLADAQAVCDKLG 66 ++ V +SGG+DS S +L+++G+ V L + + D + +C LG Sbjct: 2 RIAVAVSGGLDSLASLVMLREEGHDVLALHARFFPRLDEHL-------EKRLKGICTSLG 54 Query: 67 IELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGADYIAT 126 +E+H E+ V + F+ +Y G TPNP CN IKF L+ A +LGA +AT Sbjct: 55 VEMHVTLLQDEFAARVIDPFVQDYLDGLTPNPCARCNMRIKFGLLLDRAL-ELGASALAT 113 Query: 127 GHYVRRADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQVRKIAEDLG 186 GHY L+R LD KDQSYFL + ++A++ FP+ K +++ ++ Sbjct: 114 GHYAGIKKNSSGPVLMRALDQAKDQSYFLCLVPPRRLARAKFPMYHHFKSSMQEFLQNRN 173 Query: 187 LVTAKKKDSTGICFIGERKFREFLGRYL----PAQPGKIITVDGDEIGEHQGLMYHTLGQ 242 + +++S ICFI +R+F+ L PG I+ G +G HQGL +T GQ Sbjct: 174 ITVPAREESNEICFIP-GDYRDFIAGRLEKSHEPLPGPIVDSSGRTLGRHQGLWRYTPGQ 232 Query: 243 RKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLHWVDREPFTG 302 R+GLGI + P YV+ KD+ +N LVV E L + A+ ++ + EP Sbjct: 233 RRGLGI-----AFKHPLYVLRKDLASNTLVVGAREE---LGAGEFQARDVN-ILEEPRKW 283 Query: 303 TMRCTVKTRYRQTDIPCTVKALDDDRIEVIFD-EPVAAVTPGQSAVFYN-GEVCLGGGII 360 + V+TRYRQ P V+ R+ V + EP V PGQ A Y+ L GGII Sbjct: 284 PLDLLVQTRYRQKARPAEVELWGQ-RMRVRYKGEPGLPV-PGQVAAVYSPKGQVLAGGII 341 Query: 361 EQ 362 +Q Sbjct: 342 QQ 343 >UniRef50_Q1MRW7 tRNA-specific 2-thiouridylase mnmA n=1 Tax=Lawsonia intracellularis PHE/MN1-00 RepID=MNMA_LAWIP Length = 352 Score = 319 bits (819), Expect = 7e-86, Method: Composition-based stats. Identities = 115/367 (31%), Positives = 180/367 (49%), Gaps = 27/367 (7%) Query: 8 VIVGMSGGVDSSVSAWLLQQQ--GYQVEGLFMKNWEEDDGEEYCTAAADLADAQAVCDKL 65 V V +SGG DS + L++ + V L + E+ + + C L Sbjct: 3 VAVAVSGGTDSLYTLATLREAFGNHHVFALHARFKEQITNDPVPA-------LKEQCHNL 55 Query: 66 GIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGADYIA 125 + LH V+ E+ + + F+ Y G+TPNP + CN ++KF L+ A++LGA+ IA Sbjct: 56 NVPLHVVDLHKEFNELIIRPFIKAYADGKTPNPCVHCNAKVKFG-LLQKKAQELGANQIA 114 Query: 126 TGHYVRRADVDG-KSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQVRKIAED 184 TGHYV D D L G DS KDQSYFL EQ+ ++FP+G L K +VR+ + Sbjct: 115 TGHYVSLIDHDLYGKALKCGADSTKDQSYFLALTPREQLQTAIFPLGTLRKTEVRERLQK 174 Query: 185 LGLVTAKKKDSTGICFIGERKFREFLG--RYLPAQPGKIITVDGDEIGEHQGLMYHTLGQ 242 +GL K+S ICF+ +R+FL G+++ +DG +G+H+GL +T GQ Sbjct: 175 MGLEVPLPKESQEICFVPNDDYRKFLQSSDVDLLSEGRMVMLDGTLVGKHKGLWKYTEGQ 234 Query: 243 RKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLHWVDREPFTG 302 R+GLG+ EP YV K+ N LV+ + ++ AQ ++++ + Sbjct: 235 RRGLGVS-----WSEPLYVAHKNHSCNELVLGTAKD---ILVDTCTAQDINFLVPQD-NW 285 Query: 303 TMRCTVKTRYRQTDIPCTVKAL----DDDRIEVIFDEPVAAVTPGQSAVFYNG-EVCLGG 357 V+TRYRQ +P ++ + +I + F P PGQ A ++ L G Sbjct: 286 PKELFVRTRYRQQAVPADIQFVTNTSSSKKITIHFHSPQLPAAPGQLAAIFDKSGYVLAG 345 Query: 358 GIIEQRL 364 G+I L Sbjct: 346 GLITNDL 352 >UniRef50_B9L0K7 tRNA methyl transferase n=2 Tax=Thermomicrobia (class) RepID=B9L0K7_THERP Length = 370 Score = 319 bits (818), Expect = 1e-85, Method: Composition-based stats. Identities = 123/362 (33%), Positives = 190/362 (52%), Gaps = 21/362 (5%) Query: 6 KKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEY-CTAAADLADAQAVCDK 64 ++V+V +SGGVDS+V+A+LL+Q G++ G+ ++ ++ G + C ADA+AV + Sbjct: 10 ERVLVALSGGVDSAVTAYLLKQAGWEPVGIHLRLFDAAPGLDGVCCGDVAAADARAVAAQ 69 Query: 65 LGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGADYI 124 +GI + E+ V + EY RTPNP + CN ++ A LE AE LG ++ Sbjct: 70 IGIPFFVRDLRPEFEQEVVAPTVEEYARARTPNPCVFCNHRVRIPALLE-LAEALGIRFV 128 Query: 125 ATGHYVRRADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQVRKIAED 184 ATGHYVR+ G RL D+ +DQSY LY L+ +Q+ + LFP+GE +KP VR IA++ Sbjct: 129 ATGHYVRKVATPGGWRLAEARDAQRDQSYVLYRLTADQLERLLFPLGEYDKPTVRAIAQE 188 Query: 185 LGLVTAKKKDSTGICFI-GERKFREFLGRYLPA--QPGKIITVDGDEIGEHQGLMYHTLG 241 GL A+K S +CF + + P +PG ++ + +G H G+ + T+G Sbjct: 189 AGLFVARKPSSVDLCFAKTYGGIGRLVSQRRPETSRPGPLLDERDEVVGTHPGIAFVTIG 248 Query: 242 QRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLHWVDREPFT 301 QR+GL T E YV + D ++ VA R+++ + W D Sbjct: 249 QRRGLEWARP---TPERRYVAEIDPATAVVRVAPRE---RILTRAVRLADPVWHDP---- 298 Query: 302 GTMRCTVKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTPGQSAVFYNGEVCLGGGIIE 361 + + RY+ IP ++ VIFDEP + PGQS V Y G+ +GGGI E Sbjct: 299 -VLTADARLRYQGPRIPARIEGD-----WVIFDEPAPPLAPGQSVVLYVGDRVVGGGIAE 352 Query: 362 QR 363 + Sbjct: 353 EV 354 >UniRef50_Q54I63 Mitochondrial tRNA-specific 2-thiouridylase 1 n=1 Tax=Dictyostelium discoideum RepID=MTU1_DICDI Length = 451 Score = 319 bits (817), Expect = 1e-85, Method: Composition-based stats. Identities = 122/392 (31%), Positives = 195/392 (49%), Gaps = 37/392 (9%) Query: 1 MSETAKKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYCTAAADLADAQA 60 + KV +GMSGGVDS+++A LL+ QG+ V G+F+K+W+E + C D DA Sbjct: 60 LLPKKPKVCIGMSGGVDSTITAKLLKLQGFDVTGVFIKSWDEVEDTGRCQGERDWKDALE 119 Query: 61 VCDKLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLG 120 + L I ++ +F +YW+ VF FL +YK G TPNPD+ CN+EIKF F +FA E+ G Sbjct: 120 ASNFLDIPMYKADFVKDYWNRVFVDFLKDYKNGLTPNPDVWCNREIKFDLFFDFAKENFG 179 Query: 121 ADYIATGHYVR--------RADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGE 172 DYIATGHY + + +L R +D NKDQ++FL E++ Q++FP+G Sbjct: 180 VDYIATGHYSNLYYGEENVGDNNNNNLQLHRAIDKNKDQTFFLCMTKGERLKQAIFPIGG 239 Query: 173 LEKPQVRKIAEDLGLVTA----KKKDSTGICFIGERKFREFLGRYLPAQPGKIITVDGDE 228 K + A+ + KK S GICFIG+R +FL +Y+ +PG + + Sbjct: 240 FTKENIVSFAKT--IPNFSKITSKKSSRGICFIGKRPLPDFLSQYMTLKPGDFFDISTNS 297 Query: 229 I---GEHQGLMYHTLGQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRL-MS 284 +H+G + +T+GQ+ + + E +++V D+E NI+ V + + + Sbjct: 298 FIKGKKHKGSVCYTMGQKANI------DSLSERYFIVRSDIERNIVYVCPESQFDQFSLY 351 Query: 285 VGLIAQQLHWVDREPFTGTMRCTVK----TRYRQTDIPCTVKALDDDR-------IEVIF 333 +W++ P K R+R + T+K V Sbjct: 352 YEFNTHSFNWINEIPTEVKSEQGFKGRGICRHRGDVVNLTIKDTGKTSPIDGSVIYSVNL 411 Query: 334 DEPVAAVTPGQSAVFYNG--EVCLGGGIIEQR 363 D+P+ +V GQ ++ + C GGG+I Sbjct: 412 DQPLRSVASGQILCLFDRNTDRCFGGGVINSS 443 >UniRef50_D1PL47 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PL47_9FIRM Length = 348 Score = 319 bits (817), Expect = 1e-85, Method: Composition-based stats. Identities = 130/364 (35%), Positives = 185/364 (50%), Gaps = 25/364 (6%) Query: 2 SETAKKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYCTAAADLADAQAV 61 E KV++GMSGGVDSSV+ +LQ+QG+ V+G ++ DG ++ AQ Sbjct: 7 FEKQYKVLMGMSGGVDSSVAVRILQEQGFAVQGAVIRFSPAHDGA--------VSAAQES 58 Query: 62 CDKLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGA 121 L I LH ++ + +V F Y AG TPNP ILCN +KF+ E A +LG Sbjct: 59 AKTLQIPLHIIDARDAFEQHVILPFCESYCAGMTPNPCILCNPLVKFRLLAEKA-NELGC 117 Query: 122 DYIATGHYVRRA-DVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQVRK 180 +IATGHY R D G SR+ + +DQSY LY L E +++ + P+GE EK +R+ Sbjct: 118 QFIATGHYARVEVDHKGVSRIAVPQSTARDQSYMLYRLPQEILSKLILPLGEFEKDDIRE 177 Query: 181 IAEDLGLVTAKKKDSTGICFIGERKFREFLGRY-LPAQPGKIITVDGDEIGEHQGLMYHT 239 +A D+ L A DS ICFI + + ++ + G+ I G+++G H G+ ++T Sbjct: 178 MARDIHLACADAPDSMEICFIPDGDYAAYIRSRGFSPKTGRFIGPQGEDLGPHAGVDHYT 237 Query: 240 LGQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLHWVDREP 299 +GQRKGLGI P +V +EN + +A+ + S + L D +P Sbjct: 238 VGQRKGLGI-----AAGRPLFVKAI-LENGDIQLAETGQE---YSTHITLCDLTTPDGQP 288 Query: 300 FTGTMRCTVKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTPGQSAVFYNGEVCLGGGI 359 VK R PC L D V F +PV A PGQSAVFY + GGGI Sbjct: 289 LPAG-DYLVKIRSAAKPSPC----LYDGAGAVRFPDPVRAPAPGQSAVFYRDGLVFGGGI 343 Query: 360 IEQR 363 I + Sbjct: 344 IAET 347 >UniRef50_A5E201 Putative uncharacterized protein n=1 Tax=Lodderomyces elongisporus RepID=A5E201_LODEL Length = 509 Score = 318 bits (815), Expect = 2e-85, Method: Composition-based stats. Identities = 123/407 (30%), Positives = 186/407 (45%), Gaps = 51/407 (12%) Query: 4 TAKKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYCTAAADLADAQAVCD 63 ++I+ MS GVDSS+ A L + V G++M NW + D D Q VC Sbjct: 87 PDDRIIIAMSSGVDSSLCAALYASKYKNVHGIYMANWRQSSQ----CTERDWRDVQTVCK 142 Query: 64 KLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLE----FAAEDL 119 +L I +N EYW NVF+ + Y G TPNPD+ CN+ +KF E + Sbjct: 143 QLDISCERINLELEYWQNVFQPMIDGYAKGLTPNPDVGCNRYVKFGRLCEIMEERYGNEK 202 Query: 120 GADYIATGHYVR-------------------------------RADVDGKSRLLRGLDSN 148 G ++ TGHY R + + LLRGL + Sbjct: 203 GKWWLVTGHYARVMKKIVKEPSLAHENVDTSIVKQTPTPTNDTDFKANEEYHLLRGLSTR 262 Query: 149 KDQSYFLYTLSHEQIAQSLFPVGELEKPQVRKIAEDLGLVTAKKKDSTGICFIG---ERK 205 KDQSY+L T+S + L P+G K Q R++A++ L T++K D G+CF+ Sbjct: 263 KDQSYYLSTISPLILPHLLLPLGHQLKSQTRQLAQNYKLHTSQKPDLQGLCFVEPSNHSN 322 Query: 206 FREFLGRYLPAQPGKIITVDGDEIGEHQGLMYHTLGQRKGLGIGGTKEGTEEPWYVVDKD 265 FR+FL Y+ PG I+T DG G+H+GL + T+GQ+ + + + W+V +K+ Sbjct: 323 FRDFLAEYIEPNPGNIVTTDGKVWGKHKGLWHATIGQKSSVLMPQGDPQYKGVWFVAEKN 382 Query: 266 VENNILVVAQGHEHPRLMSVGLIAQQLHWVDREPFTGTM--RCTVKTRYRQTDIPCTVKA 323 V N +V+ +GH++P L S + WV + V ++ VK Sbjct: 383 VAKNEIVIVRGHDNPLLFSQVVTLDTCEWVYEWEKVQQLKEESAVSFQFSSLSKAILVKR 442 Query: 324 LD-------DDRIEVIFDEPVAAVTPGQSAVFYNGEVCLGGGIIEQR 363 + ++++ EPV AV PGQ V Y G LG G+I + Sbjct: 443 ITVLGNKQFGKQLKIELIEPVRAVAPGQQGVLYRGNQVLGSGMIVKT 489 >UniRef50_A7ZEK1 tRNA-specific 2-thiouridylase mnmA n=4 Tax=Campylobacter RepID=MNMA_CAMC1 Length = 340 Score = 318 bits (814), Expect = 3e-85, Method: Composition-based stats. Identities = 108/361 (29%), Positives = 191/361 (52%), Gaps = 27/361 (7%) Query: 7 KVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYCTAAADLADAQAVCDKLG 66 K++V MSGGVDS+++A LQ+ G++V+G +M ++ ++ + V + LG Sbjct: 2 KIMVAMSGGVDSTMTAKFLQEAGHEVQGCYMMLHQKPGYH-----EENIRKVKKVGEYLG 56 Query: 67 IELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGADYIAT 126 I++H ++ ++ + V++ F+ YK G+TPNP LCNK IK A L+FA + G + +AT Sbjct: 57 IKVHILDLQDKFNEYVYDPFVRLYKEGKTPNPCALCNKFIKLGALLDFA-KVNGCEKLAT 115 Query: 127 GHYVRRADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQVRKIAEDLG 186 GHYV+ D + D +KDQSYFL + E + +FP+G+ K ++++A + Sbjct: 116 GHYVQVVDG----FITCAKDPSKDQSYFLAQVPKEVLKDVIFPLGDKFKKDIKELARGVK 171 Query: 187 L--VTAKKKDSTGICFIGERKFREFLGRYLPAQ-PGKIITVDGDEIGEHQGLMYHTLGQR 243 + A + +S+ ICF+ E + E L ++ PG ++ DG+ IG HQG M++T+G+R Sbjct: 172 VLEEFATQAESSEICFV-ENTYIEVLNKHYNTNLPGNVVDKDGNIIGRHQGYMHYTIGKR 230 Query: 244 KGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLH-WVDREPFTG 302 +G + G EP +V+ + E N +VV + L + + ++ ++D + Sbjct: 231 RGFEVF----GAHEPHFVIKINAEKNEIVVGTKDD---LAQKVVELENVNLFIDED---- 279 Query: 303 TMRCTVKTRYRQTDIPCTVKALDDD-RIEVIFDEPVAAVTPGQSAVFYNGEVCLGGGIIE 361 C K RYR + V+ ++ ++ V GQ V Y+G+ + G I+ Sbjct: 280 KFECETKIRYRSPKLEAFVEVDKSSKTAKLTLNQNALGVAQGQLCVMYDGDRVIASGFIK 339 Query: 362 Q 362 Sbjct: 340 N 340 >UniRef50_A7I2L9 tRNA-specific 2-thiouridylase mnmA n=19 Tax=Campylobacter RepID=MNMA_CAMHC Length = 368 Score = 314 bits (806), Expect = 2e-84, Method: Composition-based stats. Identities = 122/386 (31%), Positives = 184/386 (47%), Gaps = 52/386 (13%) Query: 7 KVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYCTAAADLADAQAVCDKLG 66 K++V +SGGVDS+VSA +L+ GY++EG +MK DD A ++ Q V + L Sbjct: 2 KILVALSGGVDSAVSAKILKDAGYEIEGCYMKLHGRDDYH-----AKNIEKVQDVGNFLE 56 Query: 67 IELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGADYIAT 126 I+ H ++ ++ VFE FL YK G+TPNP LCN+ IKF FL+FA G D IAT Sbjct: 57 IKTHILDLCDDFKREVFEPFLQTYKVGKTPNPCALCNRTIKFGKFLDFARSK-GCDKIAT 115 Query: 127 GHYVRRADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQVRKIAEDLG 186 GHY + + + + +D +KDQSYFL + I +FP+G + K V+K A Sbjct: 116 GHYAKIEN----NLIKSAVDLSKDQSYFLANIEPRVIPNIVFPLGNMLKKDVKKFAAS-- 169 Query: 187 LVTAKK----KDSTGICFIGERKFREFLGR-YLPAQPGKIITVDGDEIGEHQGLMYHTLG 241 +K +S ICF+ E + + L Y PG + + G+ +G+H G M T+G Sbjct: 170 FPELEKISKSSESNEICFV-ENTYIDVLREFYKTETPGIVRNLQGEIVGKHNGYMNFTVG 228 Query: 242 QRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLH-WVDREPF 300 +R+G + G EP YVV D + N +VV + L Q + +++ + Sbjct: 229 KRRGFDVF----GAHEPHYVVKIDAKKNEIVVGSKAD---LDKNEFETQNFNAFLNIDEI 281 Query: 301 TGTMRCTVKTRYRQTDIPCTVKALDDD-------------------------RIEVIFDE 335 VK RYR I C ++ +D + ++I Sbjct: 282 LKMDEIYVKIRYRSAKIACKIEISLNDNLNNESLTDKNLNFENSDFLNNQDLKAKIILKT 341 Query: 336 PVAAVTPGQSAVFYNG-EVCLGGGII 360 P V GQ AVFY+ + + G I Sbjct: 342 PANGVASGQLAVFYDKSDCVIASGFI 367 >UniRef50_C1FJ72 Predicted protein n=1 Tax=Micromonas sp. RCC299 RepID=C1FJ72_9CHLO Length = 478 Score = 313 bits (802), Expect = 7e-84, Method: Composition-based stats. Identities = 130/437 (29%), Positives = 192/437 (43%), Gaps = 86/437 (19%) Query: 4 TAKKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDD---GEEYCTAAADLADAQA 60 KV V +SGGVDSSV+ LL+ G+ +++ W +D + C DL A+ Sbjct: 14 RKLKVAVLLSGGVDSSVALTLLKAAGHDCVAFYLQIWFVEDFRNTWDACPWEDDLNVARG 73 Query: 61 VCDKLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFA--AED 118 VC+ L + L V +YWD V + + + GRTPNPD+LCN +KF AF ++ Sbjct: 74 VCEHLDVPLEVVPLTNQYWDLVVKHSIEQISRGRTPNPDMLCNSRVKFGAFTDWLETNRA 133 Query: 119 LGADYIATGHYV--------------RRADVDG-----KSRLLRGLDSNKDQSYFLYTLS 159 +A+GHY ++G RL+ D+ KDQ+YFL LS Sbjct: 134 GEFHRVASGHYAAMDRVQGILADTLHGDDGMNGTSRRHPCRLIMSGDARKDQTYFLAHLS 193 Query: 160 HEQIAQSLFPVGELEKPQVRKIAEDLGLVTAKKKDSTGICFIGERKFREFLGRYLPAQPG 219 Q+A FP+G L K Q+R+IA GL A++KDS GICF+G+ KF EF+ +L +PG Sbjct: 194 QRQLAALTFPIGGLPKTQIREIARSAGLPNAERKDSQGICFLGKVKFSEFVAEHLGERPG 253 Query: 220 KIITVD-GDEIGEHQGLMYHTLGQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHE 278 I+ ++ G +G H G +HT+GQR GLG+ + PWYV KDV N++ V + + Sbjct: 254 AIVELETGTRLGTHSGFWFHTIGQRSGLGL------SGGPWYVAAKDVPGNVVYVTRDYY 307 Query: 279 HPRLMSVGLIAQQLHWVDREPFTGTMRCTV----------------------------KT 310 + W+ T Sbjct: 308 SVDKERNTFRVGEFSWLSGTAPASDADGYALGHGGEGARLAWACDGDGCDDDGATSRETT 367 Query: 311 RYRQ---------------TDIPCTVKALDDD-RIEVIFD-----------EPVAAVTPG 343 R +++ C V+ ++ R + FD + G Sbjct: 368 SSRGVNGGASASEVDATKTSELYCKVRHGENRYRCTLRFDIDGDAGTVVIEADDQGLAAG 427 Query: 344 QSAVFYNGEVCLGGGII 360 Q AVFY+ VCLG G+I Sbjct: 428 QFAVFYDRRVCLGCGVI 444 >UniRef50_C9M7Q8 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase n=1 Tax=Jonquetella anthropi E3_33 E1 RepID=C9M7Q8_9BACT Length = 344 Score = 313 bits (801), Expect = 9e-84, Method: Composition-based stats. Identities = 138/370 (37%), Positives = 196/370 (52%), Gaps = 35/370 (9%) Query: 1 MSETAKKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYCTAAADLADAQA 60 MSE+ V+VG+SGGVDS S L+ GYQV +F+K ++ AD D Q Sbjct: 1 MSES---VLVGVSGGVDSICSCLKLRDLGYQVAPVFLKMKDQ----------ADERDVQR 47 Query: 61 VCDK---LGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFA-A 116 + G+ + TV+ + V E FL E AGRTPNP ++CN+ +K + E A Sbjct: 48 IARFEEVTGLTVETVDCRELFRQRVIEPFLQELTAGRTPNPCVICNQFLKVRLLFEEADR 107 Query: 117 EDLGADYIATGHYVRRADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKP 176 +GA +ATGHY + DG RL RG S KDQSY LY L + + +FP+ EK Sbjct: 108 RQIGA--VATGHYAKILQKDGLCRLARGA-SAKDQSYMLYRLPQAYLERLVFPLENSEKG 164 Query: 177 QVRKIAEDLGLVTAKKKDSTGICFIGERKFREFLGRYL---PAQPGKIITVDGDEIGEHQ 233 QVR++A + + DS ICF+G FL ++ QPG++++ G +G H+ Sbjct: 165 QVRRLAREALGGSFGDGDSQDICFLGSLGLNAFLASHVTGAAIQPGQMVSDSGQVLGRHR 224 Query: 234 GLMYHTLGQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLH 293 GL ++T+GQRKGLG+GG PWYV +K ++ L+++ +I + Sbjct: 225 GLAHYTVGQRKGLGLGGG------PWYVTEKRLDERQLILSHVERPE----RRIILKDPV 274 Query: 294 WVDREPFTGTMRCTVKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTPGQSAVFYNGEV 353 W T V+TRYR PCT++ D+ R V+ D P A PGQSAV Y+GE+ Sbjct: 275 WHV--LPDETKSYLVQTRYRSHPKPCTLRRTDEGRWAVLLDAPSGASAPGQSAVVYDGEL 332 Query: 354 CLGGGIIEQR 363 +GGGII Q Sbjct: 333 VVGGGIIHQS 342 >UniRef50_D2L5P8 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase n=1 Tax=Desulfovibrio sp. FW1012B RepID=D2L5P8_9DELT Length = 357 Score = 312 bits (799), Expect = 1e-83, Method: Composition-based stats. Identities = 123/366 (33%), Positives = 176/366 (48%), Gaps = 19/366 (5%) Query: 7 KVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYCTAAADLADAQAVCDKLG 66 ++ V +SGG DS +S LL+ +G+ V + D + A + C +LG Sbjct: 2 RLAVAVSGGADSLLSLGLLRAEGHDVVAVHAHFLPPDMKGQELARAIETQ-----CGRLG 56 Query: 67 IELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGADYIAT 126 + V+ + E+ V F+A Y AG+TPNP CN+++KF +E AA +LGAD +AT Sbjct: 57 VPFAAVDLSREFGRQVVAPFIAAYAAGQTPNPCAACNRDMKFGLLME-AARELGADKLAT 115 Query: 127 GHYVRRADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQVRKIAEDLG 186 GH+ R + D L RG D ++DQSYFL + + +A+++FP+ K LG Sbjct: 116 GHFARLQETDRGPALFRGADDSRDQSYFLSLVPRDALARAVFPLARRRKADHPAALAALG 175 Query: 187 LVTAKKKDSTGICFIGERKFREFLGRYLPA--QPGKIITVDGDEIGEHQGLMYHTLGQRK 244 L K+S +CF+ +R FL A PG I+ DG +G HQGL HT+GQRK Sbjct: 176 LAPPLPKESREVCFVPGDDYRAFLEASGAALTGPGPIVLTDGTRLGTHQGLWRHTIGQRK 235 Query: 245 GLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLHWVDREPF-TGT 303 GLGI +P YV+ KD N LVV + L + + + T Sbjct: 236 GLGI-----AYADPLYVLGKDTAANTLVVGVRAD---LDATACRTGPANLLADPAGWPAT 287 Query: 304 MRCTVKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTPGQSAVFYN-GEVCLGGGI-IE 361 +T YR P D + + FD PVA TPGQ A Y+ L GG+ + Sbjct: 288 ATVLAQTCYRMRPRPARAVLGPDGGLALTFDAPVARPTPGQVATVYDAAGRVLAGGVLVP 347 Query: 362 QRLPLP 367 LP P Sbjct: 348 DTLPSP 353 >UniRef50_C2BUX5 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase n=3 Tax=Mobiluncus RepID=C2BUX5_9ACTO Length = 409 Score = 312 bits (799), Expect = 1e-83, Method: Composition-based stats. Identities = 130/408 (31%), Positives = 181/408 (44%), Gaps = 50/408 (12%) Query: 1 MSETA-KKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYC----TAAADL 55 M K++VG+SGGVDS+V+ LQ G++V G FM+ L Sbjct: 1 MRRKNLAKILVGLSGGVDSAVATARLQAAGHEVSGFFMQLESPSRPWSRPVTSAEPVDAL 60 Query: 56 ADAQAVCDKLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFA 115 ADA V D LG+EL + A + V + F+ Y+ G TPNP + CN+ IKF +E A Sbjct: 61 ADAHRVADFLGVELQVWDLAERFNRVVMDSFVQAYRDGLTPNPCVHCNRFIKFGYVIERA 120 Query: 116 AEDLGADYIATGHYVRRADVDGK------------------SRLLRGLDSNKDQSYFLYT 157 + G DY+ATGHY R LLRG KDQSY L Sbjct: 121 RRE-GFDYVATGHYARLWRPGQVGLIPVGVPPTVAEGAFPDFALLRGSAIGKDQSYVLAG 179 Query: 158 LSHEQIAQSLFPVGELE-KPQVRKIAEDLGLVTAKKKDSTGICFIGERKFREFLGRYLPA 216 E +A+++FP+G++ K R AE LG+ A K+DS ICFI + R FL + A Sbjct: 180 ARAEALARAVFPLGDVTDKAATRAEAEALGIPVAGKRDSFDICFIPDGDTRGFLRGCIGA 239 Query: 217 QPGKIITVDGDEIGEHQGLMYHTLGQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQG 276 G+I+ DG +G H G +T+GQR+GL I + P YVV D E N + VA Sbjct: 240 ALGQIVDEDGAVVGSHDGAFQYTVGQRRGLHIPRPHQ-DGAPRYVVGTDAETNTVFVAPR 298 Query: 277 HEHPRLMSVGLIAQQ-LHWVDREPFTG----------TMRCTVKTR-YRQTDIPCTVKA- 323 L + A ++W+ G + T++ R + Q P V Sbjct: 299 ---QALTVTEIQAGPAVNWLTDPTRLGLGATGEGELDPVGLTIQFRAHGQPVTPQAVHLE 355 Query: 324 --LDDDRIEVIF--DEPVAAVTPGQSAVFY----NGEVCLGGGIIEQR 363 D +++V V V PGQS V Y G+ + I Sbjct: 356 SSTDGTKLQVALSPTAGVTGVAPGQSLVLYQDSSQGDRVIAQATITAT 403 >UniRef50_C6BSG5 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase n=2 Tax=Desulfovibrio RepID=C6BSG5_DESAD Length = 360 Score = 311 bits (798), Expect = 2e-83, Method: Composition-based stats. Identities = 124/362 (34%), Positives = 182/362 (50%), Gaps = 21/362 (5%) Query: 5 AKKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYCTAAADLADAQAVCDK 64 +KV + +SGG DS +S LL++ G + + ++ A +A + C + Sbjct: 16 GRKVAMAVSGGADSLLSMVLLKESGADIVAVHGCFLGKEK------AEVAVAGLEKRCAE 69 Query: 65 LGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGADYI 124 L + LH + AE+ V E F+ EY G TPNP LCN EIKF + AA++LG D + Sbjct: 70 LDVSLHVFDLTAEFDRLVVEPFVQEYLRGNTPNPCALCNPEIKFGVLYK-AAQELGCDLL 128 Query: 125 ATGHYVRRADVDGKSR-LLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQVRKIAE 183 TGHYVR A+ R L RG D KDQSYFL + + + ++FP+G K Q + Sbjct: 129 GTGHYVRIAEDARYGRVLARGADMGKDQSYFLSLVPRDSVLNAIFPLGGHSKDQTYAELD 188 Query: 184 DLGLVTAKKKDSTGICFIGERKFREFLGRYLPAQPGK--IITVDGDEIGEHQGLMYHTLG 241 G+ +S ICF+ + +R+FL PG + DG ++G+H GL +T G Sbjct: 189 KRGVEIPLPSESQEICFVPDDDYRQFLIDRKVKLPGPGIAVLSDGTKVGKHNGLWRYTQG 248 Query: 242 QRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLHWVDREPFT 301 QR+GLGI + P YV+DKD++ N+L+V L + G IA +++ + Sbjct: 249 QRRGLGIS-----WKAPLYVLDKDMKRNLLIVGT---SDELEAGGCIADSFNFL-IDFER 299 Query: 302 GTMRCTVKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTPGQSAVFYNGE-VCLGGGII 360 ++TRYRQ P + I+ F EP + TPGQ Y E LGGGII Sbjct: 300 WPETVYIQTRYRQRSKPARAVQVGSS-IKFDFIEPHSRPTPGQIVAVYTEEGAVLGGGII 358 Query: 361 EQ 362 + Sbjct: 359 RE 360 >UniRef50_UPI0001C3185B tRNA(5-methylaminomethyl-2-thiouridylate)-methyl transferase n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C3185B Length = 519 Score = 310 bits (794), Expect = 7e-83, Method: Composition-based stats. Identities = 122/385 (31%), Positives = 188/385 (48%), Gaps = 38/385 (9%) Query: 7 KVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNW--EEDDGEEYCTAAADLADAQAVCDK 64 + +V MSGGVDS+V+A L ++ V + ++ W E++DGE C +A + A+A+ + Sbjct: 144 RTLVAMSGGVDSAVAALLAARESGDVVAVTLELWADEQNDGERSCCSAQAVRFARALAHR 203 Query: 65 LGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGADYI 124 +G+ T++ E+ V FL ++ AG TPNP + CN ++ A LE A+ LGA + Sbjct: 204 MGLPHLTLDLREEFSAGVVTPFLDDHAAGLTPNPCVRCNGHVRLDAMLE-LADRLGAATL 262 Query: 125 ATGHYVRRADVD-----------------GKSRLLRGLDSNKDQSYFLYTLSHEQIAQSL 167 ATGHY R + L D+ KDQ+Y L L+ +A+ Sbjct: 263 ATGHYARVEPAEPVEPAAAPAEHAAAPAEHGPLLRAAADAWKDQTYMLAALAPASLARLR 322 Query: 168 FPVGELEKPQVRKIAEDLGLVTAKKKDSTGICFIGERKFREFLGRY--LPAQPGKIITVD 225 FP+G+L KPQVR +A + L A K +S +CF+ EFL R+ + +PG+++ Sbjct: 323 FPLGDLTKPQVRALAAEAELPVASKAESQDLCFLAGTSRSEFLARHAGIAQRPGEVVDAA 382 Query: 226 GDEIGEHQGLMYHTLGQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSV 285 GD IG H G T+GQR+GLG+ EEP YV+ D +N +V + L + Sbjct: 383 GDVIGAHTGHHGFTVGQRRGLGV-----AAEEPLYVLRTDPASNRVVAGTRAQ---LATT 434 Query: 286 GLIAQQLHWVDREPFTGTMRCTVKTRYRQTDIPCTVKALD----DDRIEVIFDEPVAAVT 341 + + G VK RYR +P V R+E+ +EPV Sbjct: 435 SVPVRGARLH----RDGARVDRVKLRYRAKPLPARVVGAPAAGTHRRLEIALEEPVDGAA 490 Query: 342 PGQSAVFYNGEVCLGGGIIEQRLPL 366 PGQ A +G+V +G I++ Sbjct: 491 PGQLACLMDGDVVIGWATIDRPAAT 515 >UniRef50_UPI0001BC5A6B tRNA (5-methylaminomethyl-2-thiouridylate) -methyltransferase n=2 Tax=Fusobacterium RepID=UPI0001BC5A6B Length = 345 Score = 309 bits (793), Expect = 8e-83, Method: Composition-based stats. Identities = 116/361 (32%), Positives = 184/361 (50%), Gaps = 21/361 (5%) Query: 5 AKKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYCTAAADLADAQAVCDK 64 +KVI+GMSGGVDS+V+A+LLQ++GY+V + + +L D Q + DK Sbjct: 2 KEKVILGMSGGVDSAVAAYLLQKEGYEVIAVHFSVHNTE------ATQKELQDCQKIADK 55 Query: 65 LGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGADYI 124 + L++ + E+ + + +L+E G+TP+P LC+ IKF + A E A+Y+ Sbjct: 56 FSLTLYSYSLEKEFREKIISYYLSETGKGKTPSPCPLCDDSIKFHLLFQEA-EKRKANYV 114 Query: 125 ATGHYVRRADVD--GKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQVRKIA 182 ATGHY + + + L +KDQ Y LY LS +++ + LFP+ LEK +VR++A Sbjct: 115 ATGHYASISRNNICNTTLLEVKHHIHKDQCYMLYRLSPKKLNKILFPLASLEKAEVRELA 174 Query: 183 EDLGLVTAKKKDSTGICFIGERKFREFLGRYLPAQ--PGKIITVDGDEIGEHQGLMYHTL 240 D+GL ++KKDS GICF E ++ FL ++L + G I G+ +G+H G +TL Sbjct: 175 RDIGLFVSEKKDSQGICFAPEG-YQNFLKKHLAKKIQKGNFIDEKGNILGQHLGYPLYTL 233 Query: 241 GQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLHWVDREPF 300 GQR+GLGI T+E ++ D N + + LM + + Sbjct: 234 GQRRGLGI-----KTKEICFITKIDPGKNEITLG---NFESLMKDKVQLEDTVLHLPFER 285 Query: 301 TGTMRCTVKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTPGQSAVFYNGEVCLGGGII 360 M + R+ T +K ++ + + E A TPGQ V + +GGGII Sbjct: 286 LKDMELLARPRFSSTGFFGKLKE-EEGELTFHYFEKNAHNTPGQHLVLFYKNYVVGGGII 344 Query: 361 E 361 Sbjct: 345 R 345 >UniRef50_B8LDI7 Predicted protein (Fragment) n=1 Tax=Thalassiosira pseudonana CCMP1335 RepID=B8LDI7_THAPS Length = 509 Score = 309 bits (792), Expect = 1e-82, Method: Composition-based stats. Identities = 135/409 (33%), Positives = 194/409 (47%), Gaps = 52/409 (12%) Query: 3 ETAKKVIVGMSGGVDSSVSAWLLQQQ--GYQVEGLFMKNWEEDDGEEYC-----TAAADL 55 T +++V MSGGVDSS + ++ + G +V GL M NW D + T + Sbjct: 92 RTRPRIVVAMSGGVDSSYTTIIMYKICDGIEVIGLHMSNWNALDEDPDISNATNTREKEY 151 Query: 56 ADAQAVCDKLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFA 115 DAQ+V L I LH V+FA+EYW VFE F+ PNPD CN IKF A ++A Sbjct: 152 TDAQSVAQHLSIPLHRVSFASEYWIQVFEPFVESLAELTMPNPDYGCNTFIKFGAMKKYA 211 Query: 116 AEDLGADYIATGHYVRRADVDGKSRLLRG---LDSNKDQSYFLYTLSHEQIAQSLFPVGE 172 + AD++ATGHY + D +KDQSYFL + E +FP+G Sbjct: 212 MGQMNADFVATGHYAQLWHRGYTGDNDSSGVFPDRSKDQSYFLSGVKGEAFRNVIFPLGH 271 Query: 173 LEKPQ----VRKIAEDLGLVTAKKKDSTGICFIGERKFREFLGRYL--PAQPGKIITVD- 225 L K Q VR IA + TA K+DS GICFIG+R F +F+ +YL P PG + VD Sbjct: 272 LAKSQTQQTVRDIAHQAAIPTASKRDSMGICFIGKRNFGQFVSQYLPEPPAPGTFVDVDT 331 Query: 226 GDEIGEHQGLMYHTLGQRKGLGIGGTKEGTEEPWYVVDKDV---ENNILVVAQGHEHPRL 282 G+ +G H+G M++T+GQ + G ++V K + N + V HP L Sbjct: 332 GEIVGYHEGSMHYTIGQGAKIS------GASARYFVCGKGSTGDDGNTVFVCNSTHHPSL 385 Query: 283 MSVGLIA--QQLHWVDREPFTG---------------TMRCTVKTRYRQTDIPCTVKAL- 324 + L +W+ + ++ +TR+ Q CTV Sbjct: 386 YTDELSVDFDAFNWIGLGEKSDTDSFGHVPYPLVEGRPIKLLARTRHLQPLAQCTVSWQR 445 Query: 325 -----DDDRIEVIFDEPVAAVTPGQSAVFY---NGEVCLGGGIIEQRLP 365 ++ V F++P+ A+TP Q Y +G +CLGGG I+ R Sbjct: 446 SRDANSLGKLTVQFEKPMRAITPCQVVSLYAGSDGLICLGGGPIKGRGS 494 >UniRef50_D1B719 tRNA(5-methylaminomethyl-2-thiouridylate)-methyl transferase n=1 Tax=Thermanaerovibrio acidaminovorans DSM 6589 RepID=D1B719_THEAS Length = 346 Score = 304 bits (780), Expect = 2e-81, Method: Composition-based stats. Identities = 120/355 (33%), Positives = 177/355 (49%), Gaps = 21/355 (5%) Query: 9 IVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYCTAAADLADAQAVCDKLGIE 68 V MSGGVDSSV+A +L+ +G++ G+ + + A+ + LGI Sbjct: 7 AVLMSGGVDSSVTAMILKGEGHRPLGVTLLMSPSSSECSRS-----VQLARRTAEILGIR 61 Query: 69 LHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGADYI--AT 126 ++ + +V + F EY AGRTPNP CN+ +K E + +G D I AT Sbjct: 62 HTVLDLRDLFRRHVMDKFRTEYMAGRTPNPCSDCNRNVKLGGLAERL-DRMGLDGIPMAT 120 Query: 127 GHYVRRADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQVRKIAEDLG 186 GHY R + L GLD +DQSYFL + I + +FP+G + K QVR +AE+ Sbjct: 121 GHYARILKDPAGAHLAMGLDHRRDQSYFLAEVPKGIIRRLMFPLGGMTKEQVRLLAEEAR 180 Query: 187 LVTAKKKDSTGICFIGERKFREFLGRYLPAQPGKIITVDGDEIGEHQGLMYHTLGQRKGL 246 L ++ DS CF+ + +RE +G + +Q G I+ + G+ +G HQG T+GQRKGL Sbjct: 181 LPARREADSMDSCFVEDGDYREVIGPVIDSQ-GPIVDLRGNVLGIHQGFHRFTVGQRKGL 239 Query: 247 GIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLHWVDREPFTGTMRC 306 G+ + E YV D +VVA RLM + A +W++ + Sbjct: 240 GVS-----STEALYVKRIDPPT--VVVAPR---DRLMERHVTASGGNWLEEGDLRCGAQL 289 Query: 307 TVKTRYRQTDIPCTVKALDDDRIEVIFD-EPVAAVTPGQSAVFYNGE-VCLGGGI 359 KTR + PCTV+ ++ DRI V+F E V A PGQ V Y + V +G Sbjct: 290 LGKTRSQGRPSPCTVEEVEGDRIRVLFHGEGVFAPCPGQRLVLYRPDGVVVGCAT 344 >UniRef50_B6WY81 Putative uncharacterized protein n=1 Tax=Desulfovibrio piger ATCC 29098 RepID=B6WY81_9DELT Length = 387 Score = 304 bits (780), Expect = 3e-81, Method: Composition-based stats. Identities = 119/392 (30%), Positives = 167/392 (42%), Gaps = 49/392 (12%) Query: 9 IVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYCTAAA--------------- 53 V +SGGVDS + L++QG+ V L + C A Sbjct: 5 AVAVSGGVDSLCALLRLREQGHDVLALHGLFLPDAASSGPCPAPEGPRLLTAAEALAAPL 64 Query: 54 ------DLADAQAVCDKLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIK 107 + Q C +LGI LH + A + V F+ Y GRTPNP LCN+ IK Sbjct: 65 PPASRQAVEGLQTACGQLGIPLHVADMRAVFDREVVTPFVRAYARGRTPNPCALCNRAIK 124 Query: 108 FKAFLEFAAEDLGADYIATGHYVRRADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSL 167 F A L+ A LGAD IATGHY R D L D KDQSYFL + E++ +++ Sbjct: 125 FGALLDTAL-SLGADRIATGHYARLLDGPSGPMLAAADDLAKDQSYFLSLVPLERLRRAI 183 Query: 168 FPVGELEKPQVRKIAEDLGLVTAKKKDSTGICFIGERK--FREFLGRYLP------AQPG 219 FP+ +K ++ GL ++S ICFI + +R FL R G Sbjct: 184 FPLARQDKATSIAQVKEAGLAVPVPQESQEICFIPAGEDAYRAFLERRWQAEGLSLPGSG 243 Query: 220 KIITVD--------GDEIGEHQGLMYHTLGQRKGLGIGGTKEGTEEPWYVVDKDVENNIL 271 ++ + + H+GL +T GQR+GLGI EP YV+ K E+N L Sbjct: 244 PVLLEEAGSDGRPVLRPLARHEGLWRYTEGQRRGLGI-----AHSEPLYVLRKQGEDNTL 298 Query: 272 VVAQGHEHPRLMSVGLIAQQLHWVDREPFTGTMRCTVKTRYRQTDIPCTVKALDDDRIEV 331 VV RL G + ++ + P + R+RQ P V+ DD + V Sbjct: 299 VVGGRA---RLGMHGCLTGPVNLLCP-PEQWPDILLARLRHRQRPTPAQVELTDDG-LRV 353 Query: 332 IFDEPVAAVTPGQSAVFYNG-EVCLGGGIIEQ 362 EP PGQ A Y+ L G ++ + Sbjct: 354 TLAEPQFPSAPGQVAAIYDEQGRVLAGALVRE 385 >UniRef50_C1TMD1 Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase with PP-loop ATPase domain n=1 Tax=Dethiosulfovibrio peptidovorans DSM 11002 RepID=C1TMD1_9BACT Length = 349 Score = 301 bits (772), Expect = 2e-80, Method: Composition-based stats. Identities = 125/367 (34%), Positives = 183/367 (49%), Gaps = 24/367 (6%) Query: 2 SETAKKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYCTAAADLADAQAV 61 S T ++V++G+SGGVDS +A LL++ GY+ G+ + E++D D A + + Sbjct: 3 STTDRRVLLGVSGGVDSCAAALLLRRSGYEPIGVRLILKEKEDRL-------DEARLKGL 55 Query: 62 CDKLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGA 121 + LGI + ++ + +V E FL Y+ TPNP +LCN+ +KF+ E A G Sbjct: 56 -NSLGIPVVEIDGRKAFRSSVVEPFLEAYERSITPNPCVLCNERVKFRLLFEEADRR-GI 113 Query: 122 DYIATGHYVRRADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQVRKI 181 + TGHY G S + R KDQSY LY L E + + +FP+ L KP+VR + Sbjct: 114 HTVGTGHYAGTTPYRGGSAISRAEIGGKDQSYMLYRLPSEWLDRLIFPLENLSKPEVRDL 173 Query: 182 A-EDLGLVTAKKKDSTGICFIGERKFREFLGR--YLPAQPGKIITVDGDEIGEHQGLMYH 238 + K DS ICFI FL A PG +I++DGD +G H+GL + Sbjct: 174 VFREFDDEELKSGDSQDICFIP-GSLDSFLDENLREEAGPGPMISLDGDVLGRHRGLCRY 232 Query: 239 TLGQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLHWVDRE 298 T GQRKGLG+GG PW+VV KD N L++ + + V + L W + Sbjct: 233 TEGQRKGLGLGGG------PWFVVRKDRSENALILGRETDTS---VVRIGFSMLKW--QH 281 Query: 299 PFTGTMRCTVKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTPGQSAVFYNGEVCLGGG 358 + RYR IP V L+ EV+ ++ V GQS V Y+G LGGG Sbjct: 282 KVNEGSVYLAQHRYRSAPIPAVVSRLNQGSAEVLLEKSARGVALGQSLVLYDGPCLLGGG 341 Query: 359 IIEQRLP 365 +I++ Sbjct: 342 VIDRLYS 348 >UniRef50_C1EG18 Predicted protein (Fragment) n=2 Tax=Micromonas RepID=C1EG18_9CHLO Length = 346 Score = 297 bits (761), Expect = 4e-79, Method: Composition-based stats. Identities = 134/350 (38%), Positives = 184/350 (52%), Gaps = 43/350 (12%) Query: 7 KVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYCTA-AADLADAQAVCDKL 65 +V VG+SGGVDS+V+AWLL+ G+ V G+ M+NW+E + + D DA+A + Sbjct: 3 RVAVGLSGGVDSAVTAWLLKSAGFDVTGVLMRNWDEAEETGGECSFEKDQRDARAAARAV 62 Query: 66 GIELHTVNFAAEYWDNVFELFLAEY-KAGRTPNPDILCNKEIKFKAFLEFAAEDLGADYI 124 GI L V+F EYW +VFE FL ++ G TPNPD+ CN+ IKF A L+ LGAD + Sbjct: 63 GIPLTEVDFVKEYWHSVFEPFLRDFDGGGATPNPDLACNRHIKFGALLDHCLRSLGADLL 122 Query: 125 ATGHYVRRA--DVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQVRKIA 182 ATGHY R D RLLRG+D +KDQSYFL ++ E + ++ FP+G L K +VR++A Sbjct: 123 ATGHYARIVRIDETNPPRLLRGIDPDKDQSYFLASVRGESLERACFPLGGLTKREVRELA 182 Query: 183 ED-LGLV--TAKKKDSTGICFIGE-RKFREFLGRYLPAQ--------PGKIITVD----- 225 L +++ S GICFIG R F +F+ YLPA+ G D Sbjct: 183 AGPANLPAAVTRRRSSAGICFIGRKRDFGDFIQEYLPAEGEMRADSSRGDRRGEDSSRGA 242 Query: 226 ---------GDEIGEHQGLMYHTLGQRKGLGIGGTKEGTEEPWYVVDKDVE--NNILVVA 274 G+ +G H GL +T GQR LG G PWYVV KD +N + VA Sbjct: 243 SGSFVSVESGEAVGRHGGLARYTCGQRARLG------GASVPWYVVGKDSRGGSNSVYVA 296 Query: 275 QGHEHPRLMSVGLIAQQLHWVDREPFTG-----TMRCTVKTRYRQTDIPC 319 G +HP L + + WV G + + +TRY + C Sbjct: 297 PGADHPALFTTSAAITRCFWVSGARPRGMDTDRGAKLSAQTRYGARAVSC 346 >UniRef50_D1Y320 tRNA methyl transferase n=1 Tax=Pyramidobacter piscolens W5455 RepID=D1Y320_9BACT Length = 346 Score = 296 bits (759), Expect = 8e-79, Method: Composition-based stats. Identities = 116/364 (31%), Positives = 186/364 (51%), Gaps = 29/364 (7%) Query: 5 AKKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYCTAAADLADAQAVCDK 64 ++K++VG+SGGVDS++SA L+ GY V + + +D D + + Sbjct: 2 SEKILVGVSGGVDSALSALRLRDLGYDVTAAHLILKDGEDPT-------DRLRLERLARH 54 Query: 65 LGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGADYI 124 + +H ++ A + + V FL Y+ G TPNP ++CN +KF+A E A+ LG D + Sbjct: 55 --VPVHELDCRARFCERVVRPFLDAYRKGLTPNPCVICNAALKFRALFE-LADRLGIDKV 111 Query: 125 ATGHYVRRADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVG-ELEKPQVR-KIA 182 ATGHY R + + R DS KDQ+Y L L HE +++ FP+ E K V+ ++A Sbjct: 112 ATGHYARVLKRGRRWAIAR-TDSPKDQTYMLCRLPHEWLSRLCFPLSEERSKTGVKNELA 170 Query: 183 EDLGLVTAKKKDSTGICFIGERKFREFLGRYLPAQP---GKIITVDGDEIGEHQGLMYHT 239 LG + DS GICF+ FL +L A+ G+++ DG+++G H+GL+++T Sbjct: 171 SRLGAERLAQGDSQGICFLEGGSLERFLEDHLAAEERHIGRMVGHDGEDLGPHKGLIFYT 230 Query: 240 LGQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLHWVDREP 299 GQR+GLG+ PW+V +D +N L+++ G E + + W ++ Sbjct: 231 EGQRRGLGLSRG------PWFVARRDFASNRLLLSHGTEA---TVGTIYFENARW--QQE 279 Query: 300 FTGTMRCTVKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTPGQSAVFYN--GEVCLGG 357 C V+ YR +P + D V EP +V+ GQ+ V Y+ V LGG Sbjct: 280 VRAGQDCLVQYCYRARPVPGRLADCHDGGGTVELQEPAGSVSIGQALVLYDVAERVLLGG 339 Query: 358 GIIE 361 G I+ Sbjct: 340 GFIK 343 >UniRef50_C0A9P4 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase (Fragment) n=1 Tax=Opitutaceae bacterium TAV2 RepID=C0A9P4_9BACT Length = 369 Score = 294 bits (754), Expect = 3e-78, Method: Composition-based stats. Identities = 128/370 (34%), Positives = 170/370 (45%), Gaps = 63/370 (17%) Query: 50 TAAADLADAQAVCDKLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFK 109 D+ DA+ V D+LGI VN EY D V L Y+ G TPNPDI+CN+EIKF Sbjct: 1 PWQQDIEDARRVADQLGIPFRVVNLMDEYRDRVVAYLLDGYRRGLTPNPDIMCNREIKFG 60 Query: 110 AFLEFAAEDLGADYIATGHYVRRADVDGK------------------------------- 138 F A D G +ATGHY RR + Sbjct: 61 VF-RAWARDHGFTAVATGHYARRVPLSAADTAPAACASTVGASLAKPASANNAQSAIVAP 119 Query: 139 ---------------SRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQVRKIAE 183 L G D NKDQSYFL L+ Q+A + FP+G++EKP++R++A Sbjct: 120 SGCAGFASEAPAPSAWALHEGADPNKDQSYFLALLTQAQLADARFPIGDIEKPELRRLAR 179 Query: 184 DLGLVTAKKKDSTGICFIGERKFREFLGRYLPAQPGKIIT-VDGDEIGEHQGLMYHTLGQ 242 + GL TA KKDS GICFIG+ K ++FL +Y+P PG I+ D IGEH+GL Y TLGQ Sbjct: 180 EAGLATADKKDSQGICFIGQVKMQDFLRQYVPDNPGPIVRATDQRIIGEHRGLHYFTLGQ 239 Query: 243 RKGLGIGGTKEGTEEPWYVVDKDVENNILVVA-QGHEHPRLMSVGLIAQQLHWVDRE--P 299 RKG+G+ + + + V K ++N L VA G + P L + L W + P Sbjct: 240 RKGIGVPSNTD--NKAYVVTGKRSDDNTLFVAFDGADAPGLFQTEVRVHSLQWNTPDGAP 297 Query: 300 F-------TGTMRCTVKTRYRQTDIPCTVKALD---DDRIEVIFDEPVAAVTPGQSAVFY 349 G + RYR IP T+ + F+ P + GQ Y Sbjct: 298 PAFLTSGGPGPHALEGRVRYRDPRIPLTITLTPDLAPATAHIRFETPQRGLASGQILALY 357 Query: 350 NGEVCLGGGI 359 G LGG + Sbjct: 358 AGPRLLGGAV 367 >UniRef50_C6HVS1 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase n=1 Tax=Leptospirillum ferrodiazotrophum RepID=C6HVS1_9BACT Length = 372 Score = 291 bits (746), Expect = 2e-77, Method: Composition-based stats. Identities = 107/375 (28%), Positives = 179/375 (47%), Gaps = 23/375 (6%) Query: 2 SETAKKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYCTAAA----DLAD 57 + K +++GMSGGVDS+VSAWLL+++GY V G+ ++ W +D E + Sbjct: 1 MKRNKSIVIGMSGGVDSAVSAWLLKKEGYDVTGVILRLWGKDSSEASKGWGERTCCHVPM 60 Query: 58 AQAVCDK-LGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAA 116 + +C K L I V+ + + +V + F + Y+ G TPNP CN+++K L A Sbjct: 61 VEYLCQKILNIPYAIVDAESAFKSDVVDSFKSAYRTGETPNPCTSCNEKVKLP-LLRRWA 119 Query: 117 EDLGADYIATGHYV--RRADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELE 174 E+ G +ATGHY +R++ S L D KDQSYFL ++FPVG + Sbjct: 120 EENGIPKVATGHYTYWKRSEDFNVSGLAMAHDLAKDQSYFLSRTPDLCPENTVFPVGRMS 179 Query: 175 KPQVRKIAEDLGLVTAKKKDSTGICFIGERKFREFLGRYLPA---QPGKIITVDGDEIGE 231 KPQVR++A + G ++ +CF+ E++ EFL + P + T+ G+ +G Sbjct: 180 KPQVRELAREAGFPVEGLLENQEVCFVSEKRVTEFLSHEIDQDHRGPWTVRTIAGEALGT 239 Query: 232 HQGLMYHTLGQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIA-Q 290 + T GQRKGL + G + YV D++ L ++ + L Sbjct: 240 IPTGIGLTRGQRKGLSVAGGRR-----LYVHTVDIQERQLWLSDRSD---LFESAFTVKS 291 Query: 291 QLHWVDREPFTGTMRCTVKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTPGQSAVFYN 350 + + + V+ R + +PC V+ ++ R + P + GQ A FY+ Sbjct: 292 PMGMMFEKKGKKLGELFVRFRSTMSPVPCRVEDAEEGRFR--LERPHDGIVEGQVAAFYD 349 Query: 351 -GEVCLGGGIIEQRL 364 + +G G+I ++ Sbjct: 350 KENILVGSGLIIRKG 364 >UniRef50_B6JVF0 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase n=1 Tax=Schizosaccharomyces japonicus yFS275 RepID=B6JVF0_SCHJY Length = 414 Score = 291 bits (744), Expect = 3e-77, Method: Composition-based stats. Identities = 114/401 (28%), Positives = 175/401 (43%), Gaps = 77/401 (19%) Query: 37 MKNWEEDDGEEYCTAAADLADAQAVCDKLGIELHTVNFAAEYWDNVFELFLAEYKAGRTP 96 M+NW ++ CT+ D + V +KLGI + +NF +YW VFE L Y+ G TP Sbjct: 1 MRNWLDESSPGGCTSERDWTLVKKVGEKLGIPVTRLNFEHDYWQRVFEPTLEHYRRGWTP 60 Query: 97 NPDILCNKEIKFKAFLEFA----AEDLGADYIATGHYVR--RADVDGKSRLLRGLDSNKD 150 NPD+LCN+E+KF A E A+ A ++ATGHY R A ++ LLR D+ KD Sbjct: 61 NPDVLCNREVKFGALFEHLSHVMADSKRAWWVATGHYARTCIARDTNETCLLRPTDAKKD 120 Query: 151 QSYFLYTLSHEQIAQSLFPVGELEKPQVRKIAEDLGLVTA-KKKDSTGICFIGERK---- 205 Q+ FL + ++ + +++FP+ + K QV++ A GL + + +S G+CF+ R Sbjct: 121 QTLFLCNIPYQALQRTIFPLWQHTKEQVKREAMLHGLEESATRPESMGLCFVSPRNIRGH 180 Query: 206 FREFLGRYLPAQPGKI-ITVDGDEIG---EHQGLMYHTLGQRKGLGIGGTKEGTEEPWYV 261 FR FL YL + + G +G +G+ T+G++ GL + + ++ PWYV Sbjct: 181 FRNFLAEYLEPSSDPLRVMFRGVCVGVYPRDKGIWSFTVGEKCGLSLAALQRVSQLPWYV 240 Query: 262 VDKDVENNILVVAQGHEHPRLMSVGLIAQQLHWVDRE-----PFTGTMRCTVKTRYRQTD 316 KDV N + V G+ HP L S + W + CTV+ R++Q Sbjct: 241 WKKDVATNAVHVCPGYRHPLLFSRAATCSEWGWASPWCKRAFEGADDVACTVRIRHQQQP 300 Query: 317 ---------IPCTVK--------------------------------------------- 322 +PCT Sbjct: 301 GMSLGERYRVPCTAVDHAKRFSENPSRPSALNHFARQHCTTLRHICPTLPSRRVLTLQVP 360 Query: 323 ---ALDDDRIEVIFDEPVAAVTPGQSAVFYNGEVCLGGGII 360 D I + F +P + PGQ Y +C+GGG I Sbjct: 361 AHFRSRPDCIRLQFHQPQRGIAPGQHVAVYVDNLCVGGGPI 401 >UniRef50_C7M0G9 tRNA(5-methylaminomethyl-2-thiouridylate)-methyl transferase n=1 Tax=Acidimicrobium ferrooxidans DSM 10331 RepID=C7M0G9_ACIFD Length = 341 Score = 289 bits (741), Expect = 8e-77, Method: Composition-based stats. Identities = 108/355 (30%), Positives = 164/355 (46%), Gaps = 21/355 (5%) Query: 7 KVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYCTAAADLADAQAVCDKLG 66 +V+V MSGGVDSSV+A + ++ G+ V G+ ++ E G+ C + D+ DA+ V LG Sbjct: 3 RVVVAMSGGVDSSVAALMAREAGHDVIGVTLRL-TEAAGDRGCCSVGDVEDARTVAALLG 61 Query: 67 IELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGADYIAT 126 I + AE+ V E +L ++ G TPNP + CN+ +K A A+ LGA + T Sbjct: 62 INHIVADMRAEFHRAVVEPYLDAHRRGWTPNPCMSCNRYVKVTAL-AAWAQRLGASRLVT 120 Query: 127 GHYVRRADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQVRKIAEDLG 186 GHY D + L+RG D KDQSY L + E +A+ P+GEL K +VR A G Sbjct: 121 GHYATVLDGS-RPMLVRGRDRRKDQSYVLADVPPEVLARLWLPLGELSKDEVRTRAHAAG 179 Query: 187 LVTAKKKDSTGICFIGERKFREFLGRYLPAQPGKIITVDGDEIGEHQGLMYHTLGQRKGL 246 L K+DS +CF+ + F+ + + V G+ +G T+GQR Sbjct: 180 LPVWDKRDSQDVCFVPHGR-AAFVSAAVGLTDVPVRDVAGEPVGVTLPFELATVGQR--- 235 Query: 247 GIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLHWVDREPFTGTMRC 306 + P YV+ K + V + L+ + L V P + +R Sbjct: 236 -LREPGRSGSTPRYVIAK--SRTAVRVGSASD---LLVAAQPIEDL--VSYVPRSEPLRG 287 Query: 307 TVKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTPGQSAVFYN-GEVCLGGGII 360 V+T +P ++ V FDEP V PGQ V Y+ + L + Sbjct: 288 LVQTAAHGVALPGSL-----SEAAVAFDEPARRVAPGQRVVLYDAKDRVLASARV 337 >UniRef50_B7G4M7 Predicted protein (Fragment) n=1 Tax=Phaeodactylum tricornutum CCAP 1055/1 RepID=B7G4M7_PHATR Length = 394 Score = 285 bits (729), Expect = 2e-75, Method: Composition-based stats. Identities = 130/384 (33%), Positives = 192/384 (50%), Gaps = 47/384 (12%) Query: 7 KVIVGMSGGVDSSVSAWLLQQQ---------GYQVE-GLFMKNW----EEDDGEEYCTAA 52 +V++ +SGGVDS+V+A LLQ+ G V + M NW ++DD CT+ Sbjct: 1 RVVLALSGGVDSAVAAALLQETYGSSNNSDIGSAVLQTVHMSNWNSNTQDDDSIASCTSE 60 Query: 53 ADLADAQAVCDKLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFL 112 D DA AV + L + L +F EYW+ VFE ++ + G NPDI CN +KF A Sbjct: 61 QDWKDATAVAEHLRLNLTRQHFEREYWNQVFEPYVNDILRGTMGNPDIGCNVHVKFGALR 120 Query: 113 EFAAEDL--GADYIATGHYVRRAD--VDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLF 168 EFA L G D + HY LL D +KDQSYFL + Q++ LF Sbjct: 121 EFADWVLRWGWDQPPSPHYSHHNHQYQTPPPLLLAAADPSKDQSYFLSACAGYQLSNVLF 180 Query: 169 PVGELEKPQ---------VRKIAEDLGLVTAKKKDSTGICFIGER--KFREFLGRYLPA- 216 P+GE K + VR++A+D L A K++S GICF+G+R F +FL YLP Sbjct: 181 PLGEYYKKENPSNDGKPTVRQLAKDYNLPNANKRESMGICFVGKRQSGFGDFLHEYLPHP 240 Query: 217 -QPGKIITVDGDEI-----GEHQGLMYHTLGQRKGLGIGGTKEGTEEPWYVVDKDVENNI 270 +P + + VD + ++ + +T+GQ + G E ++VVD DV N Sbjct: 241 LRPLQFVDVDTGAVLPAPTPKNAHAVLYTIGQGAKIS------GASEKYFVVDSDVAQNR 294 Query: 271 LVVAQGHEHPRLMSVGLIAQQLHWVDREPF-----TGTMRCTVKTRYRQTDIPCTVKALD 325 ++V G HP L + L+ + ++W E G +R + R+ Q I C ++ Sbjct: 295 VLVCAGTHHPALYADSLVLETVYWTAGEMPGPLQKRGRLRLQCRIRHLQPLIDCELRVEL 354 Query: 326 DDRIEVIFDEPVAAVTPGQSAVFY 349 D + V FD+ V +TPGQ+A FY Sbjct: 355 DGSLTVYFDKAVRGITPGQTAAFY 378 >UniRef50_Q4UE41 Trna methyl transferase, putative n=2 Tax=Theileria RepID=Q4UE41_THEAN Length = 1070 Score = 284 bits (728), Expect = 3e-75, Method: Composition-based stats. Identities = 111/365 (30%), Positives = 171/365 (46%), Gaps = 41/365 (11%) Query: 2 SETAKKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYCTAAADLADAQAV 61 + K+V V +SGGVDSS++ W+++ +G+ V+ +K + +G C++ D++ A V Sbjct: 293 PRSKKRVAVLVSGGVDSSLALWIMKSRGFDVQAFHLKVNDLSNGPGLCSS-NDISYAMEV 351 Query: 62 CDKLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGA 121 C+ L + LH + F+ Y ++ L +Y+ G PNPDILCN IKF FL+ A + G Sbjct: 352 CNILRVTLHVLPFSQVYDKHILSDVLDDYRKGEVPNPDILCNSRIKFGEFLKMATD-WGF 410 Query: 122 DYIATGHYVRRADVD----------------------GKSRLLRGLDSNKDQSYFLYTLS 159 DY+ATGHY D RL D+ KDQ+YFL L+ Sbjct: 411 DYVATGHYATLCDDFFTKEQIKSPSYLDGCTSINGYYRIKRLCLSTDTVKDQTYFLSRLN 470 Query: 160 HEQIAQSLFPVGELEKPQVRKIAEDLGLVTAKKKDSTGICFIGERKFREFLGRYLPAQPG 219 Q+++ +FP+G + K QVR A+ +GL T KKDS G+CF+ + E+L + L G Sbjct: 471 QNQMSRLIFPIGNILKTQVRDFAKTVGLPTYNKKDSFGLCFLEDLDLSEYLTKTLGESRG 530 Query: 220 KIITVDG-DEIGEHQGLMYHTLGQRKGL-GIGGTKEGTEEPWYVVDKDVENNILVVAQGH 277 I+ + IGEH GL T+GQ+K + K P YVV KD+ N L V+ + Sbjct: 531 PIVEYETNKVIGEHNGLYNFTIGQKKTINNYLNPKHVGNTPKYVVKKDIYKNTLYVSASY 590 Query: 278 EHPRLM-----SVGLIAQQLHWVDRE----------PFTGTMRCTVKTRYRQTDIPCTVK 322 + W + + + VK R+ C + Sbjct: 591 NEDFFTNPRGIRSSFKVRDFFWNTPDYKDLINKVQSEVSDNFKFKVKLRHTPNYNYCNIN 650 Query: 323 ALDDD 327 D+ Sbjct: 651 FKGDE 655 >UniRef50_A9V8Y1 Predicted protein n=1 Tax=Monosiga brevicollis RepID=A9V8Y1_MONBE Length = 495 Score = 281 bits (720), Expect = 2e-74, Method: Composition-based stats. Identities = 115/303 (37%), Positives = 157/303 (51%), Gaps = 9/303 (2%) Query: 28 QGYQVEGLFMKNWEEDDGEEYCTAAADLADAQAVCDKLGIELHTVNFAAEYWDNVFELFL 87 G++V G+FM+ W+E D CTA D Q + +LGI V+F EYW +VF++ L Sbjct: 9 AGHEVTGVFMRTWDELDETGVCTAEGDWRHVQDIAQRLGIPCKRVDFVQEYWHSVFQVML 68 Query: 88 AEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGADYIATGHYVR-RADVDGKSRLLRGLD 146 E AG TPNPDILCN+ IKF AF FA + LGAD +A GHY R RLLRG D Sbjct: 69 DELAAGATPNPDILCNRHIKFDAFYHFARDQLGADRVAMGHYARVDEREPDMPRLLRGCD 128 Query: 147 SNKDQSYFLYTLSHEQIAQSLFPVGELEKPQVRKIAEDLGLV-TAKKKDSTGICFIGERK 205 NKDQSYFL L + + FP+G L K +V+ +A G A +++S G+CF+G+R+ Sbjct: 129 DNKDQSYFLAGLPVHVLRHAAFPLGHLTKDRVKALAAAAGFSDVAGQRESMGLCFVGKRR 188 Query: 206 FREFLGRYLPAQPGKIITVD-GDEIGEHQGLMYHTLGQRKGLGIGGTKEGTEEPWYVVDK 264 F + +YLP +PG + ++ G ++G L T GQ L +G YV K Sbjct: 189 FGALVQQYLPPRPGVFVHLESGRQLGPVTDLNVITFGQSARL------DGQPVRCYVAGK 242 Query: 265 DVENNILVVAQGHEHPRLMSVGLIAQQLHWVDREPFTGTMRCTVKTRYRQTDIPCTVKAL 324 D+ V +G HP L + +HW P V+ R+R PC V L Sbjct: 243 DMTAGAAYVVEGLHHPCLHARAFALSNVHWTHPPPQDVEANLHVRIRHRGQLHPCAVGPL 302 Query: 325 DDD 327 Sbjct: 303 PGP 305 >UniRef50_B0MXW7 Putative uncharacterized protein n=1 Tax=Alistipes putredinis DSM 17216 RepID=B0MXW7_9BACT Length = 339 Score = 277 bits (710), Expect = 3e-73, Method: Composition-based stats. Identities = 110/364 (30%), Positives = 158/364 (43%), Gaps = 33/364 (9%) Query: 4 TAKKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYCTAAADLADAQAVCD 63 +V++G SGG+DS + LLQ GY V L + + L A+ Sbjct: 2 KDNRVLLGFSGGIDSFAAVGLLQAAGYHVTALTLDMRGDSAL---------LEKARLRAG 52 Query: 64 KLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGADY 123 LGI + + V + F Y G TP P CN IK+ A + LG + Sbjct: 53 ALGIPWRMRSVRERFEREVVDYFTDSYFRGCTPAPCTRCNSRIKWPCLAAEA-DALGIRH 111 Query: 124 IATGHYVRRADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQVRKIAE 183 IATGHY R GK + R D+ KDQSY+L+ L E + + L P+G + K R I E Sbjct: 112 IATGHYFRITSAGGKRYVTRAADNRKDQSYYLWDLPQEILDRVLTPMGTVIK---RNIVE 168 Query: 184 DLGLVTAKKKDSTGICFIGERKFREFLGRY---LPAQPGKIITVDGDEIGEHQGLMYHTL 240 +L A +++S G+CF+ R R+FL +PG II G +G H G +T+ Sbjct: 169 EL----ADRRESMGVCFLEGRPCRDFLRSRDKTEALRPGPIIDSAGHRLGTHDGAALYTI 224 Query: 241 GQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLHWVDREPF 300 GQ+KGL + W VV D N +V E L+ L + ++ + Sbjct: 225 GQKKGLDLPPG-------WAVVAIDTAANRIVAG---EEKLLLHRTLEVGECRLIESDEV 274 Query: 301 TGTMRCTVKTR--YRQTDIPCTVKALDDDRIEVIFDEPVAAVTPGQSAVFYNGEVCLGGG 358 G R R + V I + ++P A GQ V Y GE +GGG Sbjct: 275 FGARDIRAVIRGIGRNPEGYAAVFPAASG-IRIELEDPAWAPAAGQPVVLYRGERVVGGG 333 Query: 359 IIEQ 362 I+E+ Sbjct: 334 ILER 337 >UniRef50_Q3DBK5 TRNA methyl transferase (Fragment) n=5 Tax=cellular organisms RepID=Q3DBK5_STRAG Length = 204 Score = 274 bits (701), Expect = 4e-72, Method: Composition-based stats. Identities = 125/205 (60%), Positives = 162/205 (79%), Gaps = 3/205 (1%) Query: 1 MSE-TAKKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYCTAAADLADAQ 59 M++ + +V+VGMSGGVDSSV+A LL++QGY V G+FMKNW++ D CTA D D Sbjct: 1 MTDNSNIRVVVGMSGGVDSSVTALLLKEQGYDVIGVFMKNWDDTDEFGVCTATEDYKDVA 60 Query: 60 AVCDKLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDL 119 AV D++GI ++VNF EYWD VFE FLAEY+AGRTPNPD++CNKEIKFKAFL++A L Sbjct: 61 AVADQIGIPYYSVNFEKEYWDRVFEYFLAEYRAGRTPNPDVMCNKEIKFKAFLDYAM-TL 119 Query: 120 GADYIATGHYVRR-ADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQV 178 GADY+ATGHY + D +G +LRG+D+NKDQ+YFL LS EQ+ ++LFP+G L+KP+V Sbjct: 120 GADYVATGHYAQVTRDKNGIVHMLRGVDNNKDQTYFLSQLSQEQLQKTLFPLGHLQKPEV 179 Query: 179 RKIAEDLGLVTAKKKDSTGICFIGE 203 R+IAE+ GL TAKKKDSTGICF+ + Sbjct: 180 RRIAEEAGLATAKKKDSTGICFMEK 204 >UniRef50_B6AN65 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase 1 n=2 Tax=Leptospirillum sp. Group II RepID=B6AN65_9BACT Length = 361 Score = 272 bits (696), Expect = 1e-71, Method: Composition-based stats. Identities = 106/368 (28%), Positives = 167/368 (45%), Gaps = 31/368 (8%) Query: 11 GMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYCTAAADLADAQAVC-------- 62 G+SGG+DS+VSA LL++ G+ V G ++ W E+ + + C Sbjct: 2 GLSGGIDSTVSALLLKEAGFDVYGAIVEIWSENSAGGQSGDEREKPWFERACCHLPMVKF 61 Query: 63 ---DKLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDL 119 + L I ++ + + ++F Y G TPNP CN EIK K +++A E Sbjct: 62 LCEEYLHIPYVRIDQKQNFQKKIVDVFREGYHNGVTPNPCTDCNAEIKIKTLIDWA-EQQ 120 Query: 120 GADYIATGHYVR--RADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQ 177 Y+ATGHY R + + + + LD KDQSYFL + + + LFP+G K + Sbjct: 121 KISYVATGHYARNHYSVRNRLWGIAQALDRKKDQSYFLSRVPEHVLRKVLFPLGHWTKDK 180 Query: 178 VRKIAEDLGLVTAKKKDSTGICFIGERKFREFLGRYLPAQP---GKIITVDGDEIGEHQG 234 VR+ A + + ++ CF+ + FL R A + ++G++IGE Sbjct: 181 VREFARSKKIPVEEMVENMEACFLSAKNVTSFLKREEEAHSSGNWNVTDINGEKIGEIPT 240 Query: 235 LMYHTLGQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLHW 294 + T GQRKG+G+ E YV DV+N ++++ + L I L Sbjct: 241 GIGLTKGQRKGIGV-----ANSERIYVKKVDVQNKVVIMGSKKD--ILNRNFRIRDPLGP 293 Query: 295 VDREPFTGTMRCTVKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTPGQSAVFYNGEV- 353 + ++ TG VK R +PC ++ + VTPGQ AVFY+ E Sbjct: 294 LFQKKITGN--LFVKFRSVMEAVPC----IEKGDLRFELSNENDGVTPGQIAVFYDDEQM 347 Query: 354 CLGGGIIE 361 LG GI+E Sbjct: 348 VLGSGILE 355 >UniRef50_B8IYA5 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase n=1 Tax=Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 RepID=B8IYA5_DESDA Length = 425 Score = 271 bits (692), Expect = 4e-71, Method: Composition-based stats. Identities = 129/419 (30%), Positives = 164/419 (39%), Gaps = 82/419 (19%) Query: 8 VIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYCTAAADLADAQAVCDKLGI 67 V V +SGGVDS + +LQQ GY V L + E AA A + Sbjct: 21 VAVAVSGGVDSLCALVMLQQAGYSVLALHGLFLPDAAPEPPPGLAAACAALG-------V 73 Query: 68 ELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGADYIATG 127 LH + + V F A Y AGRTPNP LCN+ IKF A + AA LGA +ATG Sbjct: 74 PLHVADLRPVFEREVLAPFAAAYAAGRTPNPCALCNRAIKFGALFD-AAMGLGAQRLATG 132 Query: 128 HYVRRADVDG------------------------------------------KSRLLRGL 145 HY R A L Sbjct: 133 HYARLAAAPEDAVTALLPEGLDPAASRDNARISAVDNGCGCTEGRHGVSGAHPPLLAAAH 192 Query: 146 DSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQVRKIAEDLGLVTAKKKDSTGICFIG--- 202 D+ KDQSYFL + E++A++ FP+ E +K + R+I GL +S ICF Sbjct: 193 DAAKDQSYFLSLVPRERLARACFPLAEQDKARSREIVARAGLAVPVPNESQDICFAPVVS 252 Query: 203 ---------ERKFREFLGRYL------PAQPGKIITVD----GDEIGEHQGLMYHTLGQR 243 +R FL R P PG + D EI H+GL +T GQR Sbjct: 253 GAATAGLAAADAYRPFLERRWQKAALVPPGPGPVFLRDAAGGLREIARHKGLWRYTEGQR 312 Query: 244 KGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLHWVDREPFTGT 303 KGLGI EP YV+ KD N LVV L + + V T Sbjct: 313 KGLGI-----AHSEPLYVLAKDGTANALVVGPRA---LLGVTRCLTGAAN-VSLPQQYWT 363 Query: 304 MRCTVKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTPGQSAVFYNG-EVCLGGGIIE 361 V+ R+RQ P V R+++ F EP PGQ A Y+G L GI+E Sbjct: 364 GELLVRLRHRQKPSPAVVTLDASGRLDICFAEPQFPSAPGQVAAVYDGRGHVLAAGIVE 422 >UniRef50_A8NDW7 Putative uncharacterized protein n=1 Tax=Coprinopsis cinerea okayama7#130 RepID=A8NDW7_COPC7 Length = 299 Score = 266 bits (681), Expect = 8e-70, Method: Composition-based stats. Identities = 113/328 (34%), Positives = 159/328 (48%), Gaps = 46/328 (14%) Query: 12 MSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDG---EEYCTAAADLADAQAVCDKLGIE 68 MSGGVDSSV+A LL QQ Y + +FM+NW+ D + C D D Q VC KL I Sbjct: 1 MSGGVDSSVAALLLAQQDYDLSAVFMRNWDTRDESGSDRGCEWEKDWEDVQRVCKKLDIP 60 Query: 69 LHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGAD--YIAT 126 ++ AE N+EIKF A LE D + AT Sbjct: 61 CSMLSRKAED------------------------NREIKFGALLERLPPDSSGQRPWFAT 96 Query: 127 GHYVRRADVDG---KSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQVRKIAE 183 GHY R+ +G + +L+R D +KDQ+Y+L ++S + ++LFP+ L+KPQVR++A+ Sbjct: 97 GHYARKTWSEGPNARPKLVRPADGHKDQTYYLSSISESGLQRALFPINHLQKPQVRELAQ 156 Query: 184 DLGLVTAKKKDSTGICFIGER-KFREFLGRYLPAQPGKIITV-DGDEIGEHQGLMYHTLG 241 L A++ DS GICF+GE+ KF FL Y+PAQ G II G +G+HQGL +T+G Sbjct: 157 KHDLHNAQRPDSVGICFVGEKAKFHNFLSNYIPAQKGLIIDETTGKVLGKHQGLWNYTIG 216 Query: 242 QRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLHWVDREPF- 300 + L G V KD N + V G H L + + + W+ + Sbjct: 217 EGSRL------PGMPTRMAVSRKDPSTNTIYVVPGMRHESLYTNVINVPEFTWIWSDSVP 270 Query: 301 -----TGTMRCTVKTRYRQTDIPCTVKA 323 R +V RYR +P V Sbjct: 271 TELDTPEGFRASVMHRYRMKAVPFLVVK 298 >UniRef50_C4QP81 tRNA(5-methylaminomethyl-2-thiouridylate)-methy lt ransferase,putative (Fragment) n=1 Tax=Schistosoma mansoni RepID=C4QP81_SCHMA Length = 312 Score = 266 bits (679), Expect = 1e-69, Method: Composition-based stats. Identities = 114/292 (39%), Positives = 168/292 (57%), Gaps = 30/292 (10%) Query: 8 VIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYCTAAADLADAQAVCDKLGI 67 V +SGGVDS+VSA+LL+++G+QV+G+FM NW+ D + C+ D DAQ VCD LGI Sbjct: 27 VACAISGGVDSAVSAYLLKKKGFQVKGVFMTNWDSLDEKIDCSLDKDRQDAQFVCDYLGI 86 Query: 68 ELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLG------- 120 NF EYW+ VF + Y+ G TPNPDILCN+ +KF + Sbjct: 87 PFFEKNFVKEYWNYVFLPLIKSYEQGATPNPDILCNRFVKFNLLTRAVLKSKNQCADDDS 146 Query: 121 -------ADYIATGH--------YVRRADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQ 165 AD IATGH Y++ + ++RLLR +D KDQ+++L T+SH+++ Sbjct: 147 QASSNLAADAIATGHYCQNSFGNYLQYRKDNVEARLLRSVDRVKDQTFWLSTISHKELPY 206 Query: 166 SLFPVGELEKPQVRKIAEDLGLV-TAKKKDSTGICFIGERKFREFLGRYLPAQPGKIITV 224 +FPVG+L K QV++IA+D+GL +++S G+CFIG+R+F EF+ YL +PG + Sbjct: 207 CMFPVGDLLKTQVKQIAQDIGLSRIYSRRESMGMCFIGKRRFSEFIDNYLEPKPGVYKDL 266 Query: 225 DG-DEIGEHQGLMYHTLGQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQ 275 + + EH G+ + TLGQR + + P+YV D N I+ V Sbjct: 267 ETDQVLEEHTGVHHFTLGQRIPI------KRFNGPYYVSKMDCHNQIIYVVS 312 >UniRef50_B6KA02 tRNA methyltransferase domain-containing protein n=3 Tax=Toxoplasma gondii RepID=B6KA02_TOXGO Length = 1598 Score = 203 bits (516), Expect = 9e-51, Method: Composition-based stats. Identities = 97/324 (29%), Positives = 138/324 (42%), Gaps = 87/324 (26%) Query: 8 VIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEED------------------DGEEYC 49 V V +SGGVDSSVS LLQQ+G+ + F+K W + C Sbjct: 833 VAVLLSGGVDSSVSLCLLQQRGFAPQAFFIKVWLPELLLVSRHLNRLLDSGLAPAAAGGC 892 Query: 50 TAAADLADAQAVCDKLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFK 109 DL A VC + + L + YW+ V + L E + G TPNPD CN+ +KF Sbjct: 893 GWERDLLFADQVCRQARVPLEVLPLQEAYWEGVVQQMLDEARQGLTPNPDWWCNQRVKFG 952 Query: 110 A---------------------------------FLEFAAEDLGADYIATGHYVRRAD-- 134 A FL ++ GA +A+GHY R Sbjct: 953 AFLDLLDGRETRFSARRIAGESEGENEKEEADMPFLRNSSRWTGA--VASGHYARVVPAA 1010 Query: 135 -------------------------------VDGKSRLLRGLDSNKDQSYFLYTLSHEQI 163 + ++RL RG D KDQSYFL LS Q+ Sbjct: 1011 ETSRRSEEGEDTEDRDEDGEEDRGDKERGSEEERRTRLFRGKDRRKDQSYFLSGLSQRQL 1070 Query: 164 AQSLFPVGELEKPQVRKIAEDLGLVTAKKKDSTGICFIGERKFREFLGRYLPAQPGKIIT 223 + + PVG++EK +VR++A L L TA+++DS G+CF+G F +L + G ++ Sbjct: 1071 RRLVTPVGDMEKVEVRRLAAALDLPTARRQDSQGLCFLGNLSLSFFFRHFLGSSTGPVLH 1130 Query: 224 VDGD-EIGEHQGLMYHTLGQRKGL 246 +G H GL T+GQRKG+ Sbjct: 1131 FPSCLALGSHDGLWNFTVGQRKGV 1154 Score = 53.8 bits (128), Expect = 9e-06, Method: Composition-based stats. Identities = 17/55 (30%), Positives = 20/55 (36%), Gaps = 4/55 (7%) Query: 312 YRQTDIPCTVKALDDD----RIEVIFDEPVAAVTPGQSAVFYNGEVCLGGGIIEQ 362 R P V+ + EP + PGQ A Y GE CLG G I Sbjct: 1527 SRAPFGPSRVETSAGSSGAWTAWIELAEPDEGLAPGQIAAIYEGEECLGAGRISA 1581 >UniRef50_C7LK58 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase n=1 Tax=Candidatus Sulcia muelleri SMDSEM RepID=C7LK58_SULMS Length = 470 Score = 203 bits (516), Expect = 1e-50, Method: Composition-based stats. Identities = 105/226 (46%), Positives = 142/226 (62%), Gaps = 8/226 (3%) Query: 6 KKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYCTAAADLADAQAVCDKL 65 K+VIVGMSGGVDSSV+A LL++QGY+V G+++K + CT D DA V L Sbjct: 2 KRVIVGMSGGVDSSVAALLLKKQGYEVIGIYLK---YSNIYNQCTWREDSIDAMLVSQTL 58 Query: 66 GIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGADYIA 125 I + ++ + Y + + EY+ G TPNPDILCN +IKFK FLE + L +D+IA Sbjct: 59 KIPFYIIDISKIYKKKIIKYIYKEYRKGFTPNPDILCNSKIKFKIFLEKLID-LKSDFIA 117 Query: 126 TGHYVRRADVDG----KSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQVRKI 181 TGHYV + ++ ++ G+D NKDQSYFL L+ QI +SLFP+G L K +VR+I Sbjct: 118 TGHYVIKKEIFENGKIYYQIKSGIDQNKDQSYFLCKLNQNQIKKSLFPLGNLTKKEVRQI 177 Query: 182 AEDLGLVTAKKKDSTGICFIGERKFREFLGRYLPAQPGKIITVDGD 227 A L+ AKKKDS GICFIG+ KF FL L + G II ++ + Sbjct: 178 ASKYHLINAKKKDSQGICFIGKIKFFNFLKLKLKKKEGSIIEINQN 223 Score = 142 bits (358), Expect = 2e-32, Method: Composition-based stats. Identities = 49/138 (35%), Positives = 71/138 (51%), Gaps = 7/138 (5%) Query: 225 DGDEIGEHQGLMYHTLGQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMS 284 DG IG+H G + T GQRKGL IG G + P +V++KD++NNIL V G HP L + Sbjct: 337 DGKIIGKHIGAHFFTKGQRKGLKIG----GYKFPLFVIEKDIKNNILYVGMGKNHPGLYT 392 Query: 285 VGLIA--QQLHWVDREPFTGTMRCTVKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTP 342 ++ + +HW++ + RYRQ T+ ++I V F+ P AV Sbjct: 393 KVVLIKKKNIHWINPNHDFFKKEVKCRIRYRQKLQKATLYK-KKNKIYVEFEIPQLAVNA 451 Query: 343 GQSAVFYNGEVCLGGGII 360 GQ V+Y +G G I Sbjct: 452 GQFIVWYINNEVIGSGRI 469 >UniRef50_A6BB58 3-oxoacyl-[acyl-carrier-protein] synthase 1 (Fragment) n=1 Tax=Vibrio parahaemolyticus AQ3810 RepID=A6BB58_VIBPA Length = 331 Score = 188 bits (478), Expect = 3e-46, Method: Composition-based stats. Identities = 123/154 (79%), Positives = 137/154 (88%), Gaps = 2/154 (1%) Query: 97 NPDILCNKEIKFKAFLEFAAEDLGADYIATGHYVRRA--DVDGKSRLLRGLDSNKDQSYF 154 NPDILCNKEIKFKAFLEFA E L ADYIA GHYVRR+ + K ++LRGLDSNKDQSYF Sbjct: 1 NPDILCNKEIKFKAFLEFADEVLEADYIAMGHYVRRSFPENGEKPQMLRGLDSNKDQSYF 60 Query: 155 LYTLSHEQIAQSLFPVGELEKPQVRKIAEDLGLVTAKKKDSTGICFIGERKFREFLGRYL 214 LYTLSHEQ+A+SLFPVG+LEKP+VR+IAE+ GL+TAKKKDSTGICFIGERKF EFLGRYL Sbjct: 61 LYTLSHEQVARSLFPVGDLEKPEVRRIAEEQGLITAKKKDSTGICFIGERKFTEFLGRYL 120 Query: 215 PAQPGKIITVDGDEIGEHQGLMYHTLGQRKGLGI 248 PAQPG I T +G+ IG+HQGLMYHTLGQRKGL I Sbjct: 121 PAQPGNIETPEGEVIGQHQGLMYHTLGQRKGLHI 154 >UniRef50_C1SG69 Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase with PP-loop ATPase domain n=1 Tax=Denitrovibrio acetiphilus DSM 12809 RepID=C1SG69_9BACT Length = 211 Score = 180 bits (456), Expect = 8e-44, Method: Composition-based stats. Identities = 64/209 (30%), Positives = 102/209 (48%), Gaps = 16/209 (7%) Query: 158 LSHEQIAQSLFPVGELEKPQVRKIAEDLGLVTAKKKDSTGICFIGERKFREFLGRYLPA- 216 ++ E+++ + +K V+ A +LGL A K +S ICF+ +R+FL + Sbjct: 15 ITREKLSNFHW--ERWKKTDVKAKAAELGLSVADKDESQDICFLKGGDYRDFLESKIDKD 72 Query: 217 --QPGKIITVDGDEIGEHQGLMYHTLGQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVA 274 + G I DG++ EH+G++Y+T+GQRKGLGI G EP +V D E+ +++ Sbjct: 73 SIKKGWFI-KDGEKFKEHEGIIYYTIGQRKGLGI-----GYHEPLFVKHIDAESGNIILG 126 Query: 275 QGHEHPRLMSVGLIAQQLHWVDREPFTGTMRCTVKTRYRQTDIPCTVKALDDDRIEVIFD 334 E + G+ + + R VK RYR +PC V+ + ++FD Sbjct: 127 NKDE---VTGTGVKVHDFVF--PDDHDRVFRAEVKVRYRMAPVPCMVEIHPGNTATILFD 181 Query: 335 EPVAAVTPGQSAVFYNGEVCLGGGIIEQR 363 P A TPGQ A Y ++ GG IE Sbjct: 182 RPEFAPTPGQIACVYENDLVTCGGYIESV 210 >UniRef50_Q4QIT1 TRNA-methyl transferase, putative n=4 Tax=Leishmania RepID=Q4QIT1_LEIMA Length = 603 Score = 174 bits (441), Expect = 5e-42, Method: Composition-based stats. Identities = 130/557 (23%), Positives = 179/557 (32%), Gaps = 213/557 (38%) Query: 2 SETAKKVIVGMSGGVDSSVSAWL------------------------------------- 24 + + ++ +G+SGGVDS+V+A + Sbjct: 6 TRSQLRIAIGLSGGVDSAVTALVLQRCVHTTLDVAALRCFGGPRAPPPPLLALRAAVDAH 65 Query: 25 --LQQQ-GYQVEG-------------------LFMKNWEEDDGEEYCT--AAADLADAQA 60 L + G V FM+NW +D A D DAQ Sbjct: 66 VPLHELLGKLVTAGEPSITAASYDAAPVQHTPFFMRNWHDDSAASGWCVRAQVDYDDAQQ 125 Query: 61 VCDKLGI------ELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEF 114 V L + L + ++EY + FE LA Y AG T N D+LCN +IKF A Sbjct: 126 VARTLDLLPRDGTPLPWYDLSSEYVEQCFERMLAAYAAGHTLNVDVLCNSKIKFGAL-TR 184 Query: 115 AAEDLGADY----IATGHYVRRADVDGKSRLLRGLDSNK-----------------DQSY 153 A G+ + +ATGHY R D+ G D K DQ+ Sbjct: 185 ALRRTGSVFSETLLATGHYARTWDLPHGVH---GGDDAKRRPVLLVRPCSAGRDLNDQTV 241 Query: 154 FLYTLSHEQIAQSLFPVGELE--KPQVRKIAED--------------LGLV------TAK 191 FL + +A ++FP+G L K VR +A G ++ Sbjct: 242 FLSRVPPSALATAIFPLGHLFTCKADVRALARHSFGQSGSTAAVASSNGEPQRTVAHISR 301 Query: 192 KKDSTGICFIGE-------------RKFREFLGRYL----------------PAQPGKII 222 KK STGICF+G +F FL YL A G+ + Sbjct: 302 KKTSTGICFVGPPSAATCAGNTSCSSRFPLFLNEYLPPPPPPSGPSTRTVFCDAVTGEEL 361 Query: 223 TVDGDEIGEHQGLMY----------------------------HTLGQRKGLGIGGTKEG 254 V GD G TLGQR L Sbjct: 362 LVPGDTTEHFAGASLQSSACRLYRGPMCGALRVDYPGLLPAYAFTLGQRVRLCRRTVDGR 421 Query: 255 TEE-PWYVVDKDVE--------NN---------ILVVAQGHEHPRLMSVGLIAQQLHW-- 294 E +YV DK + +N + V + L + LHW Sbjct: 422 VREAAYYVADKVLAPLPLSALSDNKAVPVRLLAEVRVVAQWNNALLYTSQATVASLHWWL 481 Query: 295 ----------VDREPFTGTMRCTVKTRYRQTDIPCTVKALDDD------------RIEVI 332 V+ E +RC TR+ + P TV+ D R V Sbjct: 482 PLPMLHQRAVVNHERGMYGLRCHCCTRHHEALQPATVEWEAADEELSADAEVRVRRARVH 541 Query: 333 FDEPVAAVTPGQSAVFY 349 FD P+ AVTPGQ+ V Y Sbjct: 542 FDAPLRAVTPGQALVAY 558 >UniRef50_C1SG68 Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase with PP-loop ATPase domain n=1 Tax=Denitrovibrio acetiphilus DSM 12809 RepID=C1SG68_9BACT Length = 164 Score = 173 bits (439), Expect = 8e-42, Method: Composition-based stats. Identities = 60/171 (35%), Positives = 91/171 (53%), Gaps = 9/171 (5%) Query: 5 AKKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYCTAAADLADAQAVCDK 64 +KV++ MSGGVDS+++A +++++GY V G +K ++E L D + + Sbjct: 2 KEKVLIAMSGGVDSTLTAHIMKEKGYDVIGCTIKFFDEQT--------EALHDGEKAAKE 53 Query: 65 LGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGADYI 124 LGI+ + ++ + ++V F+ Y GRTPNP CN+ KF + GA I Sbjct: 54 LGIDWYYADYTDYFKEDVISYFIRTYIQGRTPNPCAHCNRHAKFNYLFRE-MKSKGATKI 112 Query: 125 ATGHYVRRADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEK 175 ATGHY + V K +G D KDQSY+L L Q FP+GE+EK Sbjct: 113 ATGHYAGKVKVGEKYFFKKGQDVRKDQSYYLCLLKDHQREVIEFPLGEMEK 163 >UniRef50_Q7X189 Lfe204p1 (Fragment) n=1 Tax=Leptospirillum ferrooxidans RepID=Q7X189_9BACT Length = 238 Score = 172 bits (435), Expect = 2e-41, Method: Composition-based stats. Identities = 63/194 (32%), Positives = 104/194 (53%), Gaps = 15/194 (7%) Query: 5 AKKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYCTAAADLA-------- 56 K+V+VGMSGGVDS+VSA +++Q GY V G ++ W+ +D E ++ + Sbjct: 2 NKRVLVGMSGGVDSAVSALIMKQSGYDVTGAIIEIWDSEDSSECHPSSENARPWSERGCC 61 Query: 57 ---DAQAVCDK-LGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFL 112 + +C++ L I V+ ++ V + F EY TPNP + CN +K + Sbjct: 62 HVPMVRYLCEEVLEIPFVMVDRRDDFRKKVMDPFRDEYLKALTPNPCVTCNARVKIHELI 121 Query: 113 EFAAEDLGADYIATGHYVR--RADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPV 170 A+ LG + +ATGHY R + V G+ + +G D + F +L E+IA+ ++P+ Sbjct: 122 -ALADSLGIEMVATGHYARKVYSPVTGQYHVAKGRDPGEGPVLFFGSLKSEEIARLVWPL 180 Query: 171 GELEKPQVRKIAED 184 +L K +VRK+A D Sbjct: 181 SDLTKEEVRKLARD 194 >UniRef50_C9ZUV8 tRNA-methyl transferase, putative n=2 Tax=Trypanosoma brucei RepID=C9ZUV8_TRYBG Length = 557 Score = 172 bits (435), Expect = 3e-41, Method: Composition-based stats. Identities = 128/532 (24%), Positives = 179/532 (33%), Gaps = 186/532 (34%) Query: 1 MSETAKKVIVGMSGGVDSSVSAWLLQQ---QGYQVEGL---------------------- 35 M+ A +V V +SGGVDS+V+A L + VE L Sbjct: 1 MTSQAVRVAVALSGGVDSAVAALFLCRCVSTWRDVEALWRSPRPLPLDTVMDAIVKRRAW 60 Query: 36 -------------------------FMKNWEEDDGEEYCTA------------------- 51 FMKNW++ +A Sbjct: 61 ADITQSSATTPMQQNPTTAVHYFPLFMKNWDDVSEGSDGSASDTCENIGGNQRRRWCEAA 120 Query: 52 AADLADAQAVCDKLGI-----ELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEI 106 D DA V G+ L NF++ Y + F+ L Y G T N D+LCN EI Sbjct: 121 EQDYHDAAEVARFAGLLSESEALPLFNFSSHYVTSCFDRMLNSYARGNTLNVDVLCNSEI 180 Query: 107 KFKAFLEFAAEDLGADYIATGHYVRR------------ADVDGKSRLLR--------GLD 146 KF A L A Y+ATGHY R A G R R G D Sbjct: 181 KFGALLHALHTSGRAQYVATGHYARTISLADTVFCSAAASESGNGRYTRVIARPFTAGQD 240 Query: 147 SNKDQSYFLYTLSHEQIAQSLFPVGEL--EKPQVRKIAEDLGLV-TAKKKDSTGICFIGE 203 N DQ+ FL LS Q++ +FP+G + K VR +A LGL + KK STG+CF+GE Sbjct: 241 LN-DQTLFLSRLSRLQLSNVIFPLGHVFQRKADVRVVASHLGLTRVSAKKTSTGLCFVGE 299 Query: 204 RKFR---------EFLGRYLPAQP--------------------------GKIITVDGDE 228 R R FL Y+ + P + + G Sbjct: 300 RYKRKAGKGGGFGAFLTEYMASAPEESGGKGVHADEETKYLDAETEQIIAADQLNIPGTV 359 Query: 229 IGEHQGL---MYHTLGQRKGLGIGGTKEGTEEPWYVVDKDVE---------NN------- 269 + + L Y T+GQR +G G+ +YV K+V N Sbjct: 360 RRQDRTLLPAHYLTVGQRIRGAVGN--SGSPRCYYVQRKEVSPIHGYEKCGENCCIRYLR 417 Query: 270 ILVVAQGHEHPRLMSVGLIAQQLHW-----------VDREPFTGT----------MRCTV 308 + + HP L + + + + P +RC+ Sbjct: 418 NVWLVNRWNHPLLYNTLVKLSDVVLPLRMTQLLMLSLAFPPSRSPRHGEEGEEVCLRCSC 477 Query: 309 KTRYRQTDIPCTVKALDD-----------DRIEVIFDEPVAAVTPGQSAVFY 349 TR++ P ++ + V FD PV A T GQ+ V Y Sbjct: 478 CTRHQDPLHPAVLRFRACEVQEFAGGTSVNFAVVEFDTPVRAATAGQTLVGY 529 >UniRef50_Q5DCM7 SJCHGC00881 protein n=2 Tax=Schistosoma japonicum RepID=Q5DCM7_SCHJA Length = 259 Score = 165 bits (417), Expect = 3e-39, Method: Composition-based stats. Identities = 63/243 (25%), Positives = 106/243 (43%), Gaps = 49/243 (20%) Query: 167 LFPVGELEKPQVRKIAEDLGLV-TAKKKDSTGICFIGERKFREFLGRYLPAQPGKIITVD 225 +FPVG L K QV++IA+D+GL +++S G+CFIG+R+F EF+ YL +PG Sbjct: 1 MFPVGHLLKTQVKQIAQDIGLSRIYSRRESMGMCFIGKRRFSEFIDNYLEPRPGICKDFG 60 Query: 226 G-DEIGEHQGLMYHTLGQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMS 284 + EH G+ + TLGQR + P+YV D I+ V + HP L Sbjct: 61 TDQVLEEHTGVHHFTLGQRVPMK------RFSGPYYVCKMDYHKQIIYVVRDPTHPSLFM 114 Query: 285 VGLIAQQLHWVDREPFTGTMRCTVKTRYRQT--DIPCTVKALDD---------------- 326 + W++ +PF+ ++ +++ + C++K ++ Sbjct: 115 RKCWSGPAVWINSKPFSSINLKNIQFQWQNKWRPVRCSLKPFNEISLAAAYVKKDVKRCL 174 Query: 327 -----------------------DRIEVIFDEPVAAVTPGQSAVFYNGEVCLGGGIIEQR 363 + + + P+ + PGQ FY+G VCLGG +I Sbjct: 175 SKSDNAALVNTIDASIEDNREIGPCLSIELEVPMRCLAPGQWCAFYDGNVCLGGAMICGS 234 Query: 364 LPL 366 + L Sbjct: 235 ISL 237 >UniRef50_C9R7K7 Thiamine biosynthesis protein-like protein n=1 Tax=Ammonifex degensii KC4 RepID=C9R7K7_AMMDK Length = 329 Score = 150 bits (380), Expect = 5e-35, Method: Composition-based stats. Identities = 61/346 (17%), Positives = 115/346 (33%), Gaps = 60/346 (17%) Query: 7 KVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYCTAAADLADAQAVCDKLG 66 K + SGG+DS ++ L++ QG +V G+ + D + A+ + +KLG Sbjct: 2 KALALFSGGLDSILAVKLIKLQGIEVVGVVF-----------TSPFFDASRAKQMAEKLG 50 Query: 67 IELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGADYIAT 126 + L V+ E V + G+ NP I C+ + +A ++ GA +I T Sbjct: 51 LPLRVVDITEELIPLVLNP---RHGYGKHFNPCIDCHALMLRRA--GELMKEEGASFIIT 105 Query: 127 GHYVRRADVD-GKSRLLRGLDSNKDQSYFLYTLSHEQIAQS------------LFPVGEL 173 G + + + L + Y L LS + + L + Sbjct: 106 GEVLGERPMSQNRQALEIVAREAGLEGYVLRPLSALLLPPTIPEKEGWVKREKLLGIKGR 165 Query: 174 EKPQVRKIAEDLGLVTAKKKDSTGICFIGERKFREFLGRYLPAQPGKII-TVDGDEIGEH 232 + ++A G+ G C + + + + + L +P + + G H Sbjct: 166 SRKTQLELARQWGIEDF--PTPAGGCLLTDPGYAQRMKELLRLRPAPSRQDFELLKYGRH 223 Query: 233 QGLMYHTLGQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQL 292 + G + VV + E N ++ L+ + I Sbjct: 224 ----FFRPGVQI----------------VVARKEEENARLLTLREPADFLLRLKNIPGPR 263 Query: 293 HWVDREPFTGTMRCTV--KTRYRQTDIPCTVKALDDDRIEVIFDEP 336 V P +R RY + + +R+ V EP Sbjct: 264 TLVRGNPGEKELRLAAALTIRYS------KAREREKNRVTVDRKEP 303 >UniRef50_C7R8C6 tRNA(5-methylaminomethyl-2-thiouridylate)-methyl transferase n=12 Tax=Gammaproteobacteria RepID=C7R8C6_KANKD Length = 362 Score = 150 bits (379), Expect = 8e-35, Method: Composition-based stats. Identities = 61/336 (18%), Positives = 121/336 (36%), Gaps = 47/336 (13%) Query: 2 SETAKKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYC-----TAAADLA 56 + +K + +SGG+DS ++A ++Q+QG VEG+ +G + Sbjct: 14 PQKQRKAVALISGGLDSLLAAKVIQEQGIHVEGINFYTGFCVEGHTHAIRKKDKDKQKRN 73 Query: 57 DAQAVCDKLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAA 116 ++ V ++LGI+LH ++ + EY D V ++ G NP + C + +A A Sbjct: 74 NSLWVAEQLGIKLHIIDISEEYKDIVLNP---KHGYGANLNPCLDCKIFMVNQAQAWAWA 130 Query: 117 EDLGADYIATGHYVRRADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFP------- 169 E+ G D+I TG + + + + + +S L A++L P Sbjct: 131 EENGFDFIITGEVIGQRPKSQRKETMPIIAR---ESGADDRLLRPLCAKNLMPTLPEREG 187 Query: 170 ---------VGELEKPQVRKIAEDLGLVTAKKKDSTGICFIGERKFREFLGRYLPAQPGK 220 + ++A+ G + + G CF+ + + L A+ + Sbjct: 188 WVDREQLYGFSGRSRKPQFELAKQFGFEDFAQP-AGGCCFLTDANYSAKLADLWEARGER 246 Query: 221 IITVDGDEIGEHQGLMYHTLGQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHP 280 +D +M +G+ V ++ ENN L + Sbjct: 247 RYELD--------DIMLLKVGRHIR-------PKPNFKLIVSREEGENNFLT-GYKKQFT 290 Query: 281 RLMSVGLIAQQLHWVDREPFTGTMRCTVKT--RYRQ 314 + +V L +D ++ + RY Sbjct: 291 SIHTVS-HGGPLTLLDGAFDKEDIKLAAQITARYSG 325 >UniRef50_A0LCE2 Putative uncharacterized protein n=1 Tax=Magnetococcus sp. MC-1 RepID=A0LCE2_MAGSM Length = 346 Score = 146 bits (370), Expect = 8e-34, Method: Composition-based stats. Identities = 59/366 (16%), Positives = 119/366 (32%), Gaps = 57/366 (15%) Query: 1 MSETAKKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYCTAAAD-----L 55 MS++ + + +SGG+DS ++ LL +Q +V + A Sbjct: 1 MSKS--RALGLLSGGLDSMLATKLLMEQDIEVHCVNFYTGFCVQSHTGAIRAKAGDPPPK 58 Query: 56 ADAQAVCDKLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFA 115 DA LGI+LH V+ + EY + V +Y G+ NP + C + KA Sbjct: 59 HDALHAAQILGIKLHIVDISEEYVEIVTNP---KYGYGKNLNPCMDCKIFMIKKA--WAL 113 Query: 116 AEDLGADYIATGHYVRRADVDGKSRL-----------------LRGLDSNKDQSYFLYTL 158 E LG D++ TG V + + + L + Q L + Sbjct: 114 KEQLGFDFLFTGEVVGQRPMSQRKDTMPVVPREAGVEGWLVRPLSAKRLPETQPELLGMV 173 Query: 159 SHEQIAQSLFPVGELEKPQVRKIAEDLGLVTAKKKDSTGICFIGERKFREFLGRYLPAQP 218 +++ + +A+ GL + G CF+ + + + L + Sbjct: 174 DRQRL----LDFHGRTRKPQMALAKQYGLTDY-PAPAGGCCFLTDENYSKRLQDLWDTR- 227 Query: 219 GKIITVDGDEIGEHQGLMYHTLGQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHE 278 G +++ L G + V+ ++ N + Sbjct: 228 ---------------GEKKYSMDDIILLKAGRHLRLSASCKMVIGREEAENNFLQGFRL- 271 Query: 279 HPRLMSVGLIAQQLHWVDREPFTGTMRCTVKT--RYRQTDIPCTVKALDDDRIEVIFDEP 336 L+ + + V+ + + R+ + T++ + + E Sbjct: 272 GRILIRAHGVPGPVALVEGAASESEITTACRVAARFGKGKNLATIEMIVEQNGR----ES 327 Query: 337 VAAVTP 342 + +V P Sbjct: 328 IRSVAP 333 >UniRef50_A5KCE1 tRNA methyl transferase, putative n=1 Tax=Plasmodium vivax RepID=A5KCE1_PLAVI Length = 837 Score = 146 bits (370), Expect = 9e-34, Method: Composition-based stats. Identities = 62/245 (25%), Positives = 106/245 (43%), Gaps = 43/245 (17%) Query: 7 KVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYCTAAADLADAQAVCDKLG 66 +V +SGGVDS ++ LL+++ + V ++ +D + +DL + +C K Sbjct: 236 RVAHMLSGGVDSLMALRLLERKKFYVHNFYLHFAHQD------CSKSDLQYVKQICSKRK 289 Query: 67 IELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDL------- 119 L VN EY + V L Y G+ PN DILCN+++K+ + + Sbjct: 290 -NLFIVNVNEEYTEQVLIPMLRSYSEGQIPNADILCNEKVKYHLLMRTMRKLCRERGGGW 348 Query: 120 GADYIATGHYVRRADVD-----------------------------GKSRLLRGLDSNKD 150 Y++TGHY + D + +L+ G D KD Sbjct: 349 NYSYVSTGHYAMISTNDEANANRLFNGNFPYVGDELDGEIPRRGPRKRYKLIVGRDERKD 408 Query: 151 QSYFLYTLSHEQIAQSLFPVGELEKPQVRKIAEDLGLVTAKKKDSTGICFIGERKFREFL 210 Q++FL + S +Q+++ LFP+ K V++I E ++++ G+C G L Sbjct: 409 QTFFLSSFSEKQLSKFLFPLCLRRKSDVKRIMERRAAGQYNRRETRGLCLYGRVDMHSLL 468 Query: 211 GRYLP 215 G YL Sbjct: 469 GLYLG 473 Score = 61.1 bits (147), Expect = 6e-08, Method: Composition-based stats. Identities = 33/211 (15%), Positives = 60/211 (28%), Gaps = 67/211 (31%) Query: 206 FREFLGRYLP-----AQPGKIITVDGDEIGEHQGLMYHTLGQRKGLGIGGTKEGTEEP-- 258 FR F ++LP + I DG + ++G+ + +GQ+K + + + Sbjct: 558 FRAFREKHLPSFNLRFKNYIISVEDGTVMDTNEGVHLYAIGQKKYITNHLHQLYNSKGKG 617 Query: 259 ------------------WYVVDK--------DVENNILVVAQGHEHP--RLMSVGLIAQ 290 W VV K +V+ N + V++ +E R + Sbjct: 618 RGRGRGGACEKNVTSSCQWTVVYKKMLRRASGNVKENFIYVSRDYESGLFRQLRGRCRLG 677 Query: 291 QLHWVDREPFTGTMRCT-------------------------------VKTRYRQTDIPC 319 WV P + VK R + Sbjct: 678 AFRWVASAPPSHLGEAEAEKRQTVPLAVQPAMPLTMPLTVPPIGRPICVKVRNSEEIKEA 737 Query: 320 TVKALDDD-RIEVIFDEPVAAVTPGQSAVFY 349 + D + + ++PGQ FY Sbjct: 738 QIALDDAGQTAYLTLRQKDIGLSPGQIVTFY 768 >UniRef50_B3L1V6 tRNA methyl transferase, putative n=1 Tax=Plasmodium knowlesi strain H RepID=B3L1V6_PLAKH Length = 906 Score = 145 bits (366), Expect = 2e-33, Method: Composition-based stats. Identities = 57/238 (23%), Positives = 102/238 (42%), Gaps = 43/238 (18%) Query: 7 KVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYCTAAADLADAQAVCDKLG 66 +V +SGGVDS ++ LL+++ + V F+ ++ + +DL + +C K Sbjct: 331 RVAHMLSGGVDSLMALRLLEKKKFYVHNFFLHFAHQE------CSKSDLRYVKKICSKRK 384 Query: 67 IELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAE-------DL 119 L VN EY + V L Y G+ PN DI+CN+++K+ + + Sbjct: 385 -NLFIVNINEEYTEQVLIPMLRSYADGQIPNADIMCNEKVKYNLLMRKMKKLCRERGGRW 443 Query: 120 GADYIATGHYVRRADVD-----------------------------GKSRLLRGLDSNKD 150 Y++TGHY + D + +L+ G D KD Sbjct: 444 DYSYVSTGHYAMISTNDVSNANKLFSGNFPYVGDDTDGKMPRRTPRKRYKLVVGRDVKKD 503 Query: 151 QSYFLYTLSHEQIAQSLFPVGELEKPQVRKIAEDLGLVTAKKKDSTGICFIGERKFRE 208 Q++FL +LS EQ+++ LFP+ K ++ + E ++++ G+C G Sbjct: 504 QTFFLSSLSEEQLSKFLFPLCLHRKSDIKMVMERREAGKYNQRETRGLCLYGRVDMHS 561 Score = 61.5 bits (148), Expect = 5e-08, Method: Composition-based stats. Identities = 31/213 (14%), Positives = 62/213 (29%), Gaps = 64/213 (30%) Query: 201 IGERKFREFLGRYLPAQPGKIITV-----DGDEIGEHQGLMYHTLGQRKGLGIGGTKEGT 255 + +FR F ++LP+ + DG + ++G+ + +GQ+K + + Sbjct: 621 VRSPEFRAFQEKHLPSFNLRFKNHIINVEDGTVMDTNEGIHLYAIGQKKHITNYLHELYN 680 Query: 256 EEP--------------WYVVDK--------DVENNILVVAQGHEHPRL--MSVGLIAQQ 291 + W VV K +V+ N + +++ + + V Sbjct: 681 SKGRNRTCEKNYISSCQWTVVYKKMFKRASGNVKENFIYLSRNYGSSLFRYLRVRCKLGD 740 Query: 292 LHWVDREPFT----------------------------------GTMRCTVKTRYRQTDI 317 WV P + G +K R + Sbjct: 741 FRWVASSPPSYLRQKIQDVAKEGQSEVTEGTDGSLKISPTRKKMGGRSICIKVRNSEKIK 800 Query: 318 PCTVKALDDD-RIEVIFDEPVAAVTPGQSAVFY 349 + D + E ++PGQ FY Sbjct: 801 EAKITLDDSGKTGYLTLREKDIGLSPGQIVTFY 833 >UniRef50_Q4Y1X1 Putative uncharacterized protein (Fragment) n=1 Tax=Plasmodium chabaudi RepID=Q4Y1X1_PLACH Length = 601 Score = 141 bits (357), Expect = 3e-32, Method: Composition-based stats. Identities = 69/328 (21%), Positives = 118/328 (35%), Gaps = 89/328 (27%) Query: 7 KVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYCTAAADLADAQAVCDKLG 66 KV +SGG+DS ++ LL+++ + V+ + D + DL + +C Sbjct: 260 KVAHMLSGGIDSLMALILLEKKKFYVDNFYFNFAHYD------CSKNDLKYVKNICKNR- 312 Query: 67 IELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAE-------DL 119 LH +N EY++NVF L Y G PNPDI+CN++IK+ L+ D Sbjct: 313 NNLHIININNEYYENVFLPMLKSYSKGEVPNPDIVCNQKIKYNFLLKTIKSISKSKGTDF 372 Query: 120 GADYIATGHYVRRADVD----------------------------GKSRLLRGLDSNKDQ 151 YI+TGHY + D + +L+ D KDQ Sbjct: 373 NYSYISTGHYAMISTNDAQNCNNIFNNNFPYVKGKMGNKKNKKNKKRYKLVVSSDLKKDQ 432 Query: 152 SYFLYTLSHEQIAQSLFPVGELEKPQVRKIAEDLGLVTAKKKDSTGICFIGERKFREFLG 211 ++FL + S +Q+++ LFP+G K ++ + + ++ G+C G L Sbjct: 433 TFFLSSFSEKQLSKFLFPLGLYNKNDIKTFMKKHNITDYNPNETKGLCLYGNVDMHSLLR 492 Query: 212 RYLP-----------------------------------AQPGKIITV------------ 224 Y + I Sbjct: 493 LYFKTDECSNLPPSSNSETVRSEKTAGLDAQVSGVDLHRFKKNDIKDFNLNYVNYIINID 552 Query: 225 DGDEIGEHQGLMYHTLGQRKGLGIGGTK 252 DG + ++ + +T+GQ K + Sbjct: 553 DGIVMEKNSDIHLYTIGQNKHITTYIHD 580 >UniRef50_Q3AD57 Putative uncharacterized protein n=1 Tax=Carboxydothermus hydrogenoformans Z-2901 RepID=Q3AD57_CARHZ Length = 338 Score = 141 bits (357), Expect = 3e-32, Method: Composition-based stats. Identities = 61/340 (17%), Positives = 110/340 (32%), Gaps = 48/340 (14%) Query: 7 KVIVGMSGGVDSSVSAWLLQQQGYQVEGLFM--KNWEEDDGEEYCTAAADLADAQAVCDK 64 K + SGG+DS+++ L+ +QG +VE + + C + A + Sbjct: 3 KALALFSGGLDSTLAIKLILEQGVEVEAVNFTSPFCRCLAKGQGCASTA------KLAAD 56 Query: 65 LGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGADYI 124 LGI+LH N EY V + G NP I C KFK + E++GA ++ Sbjct: 57 LGIKLHVQNCGEEYLRIVENP---PHGYGSALNPCIDCRIF-KFKK-AKKLMEEIGAKFM 111 Query: 125 ATGHYVRRADVDGKSRLLRGLDSNKD-QSYFLYTLSHEQIAQS------------LFPVG 171 TG + + + + +D + L LS + L + Sbjct: 112 ITGEVLGQRPNSQRRDAINLIDREAGIKGLVLRPLSALHFPPTIAEQEGYVSRDKLLAIS 171 Query: 172 ELEKPQVRKIAEDLGLVTAKKKDSTGICFIGERKFREFLGRYLPAQPGKIITVDGDEIGE 231 + ++A G+ G C + +++F + +I +G Sbjct: 172 GRSRKTQMELAASFGINDYPCPS--GGCLLTKKEFAGKVQ--------DLIRYNGK---- 217 Query: 232 HQGLMYHTLGQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQ 291 T+ L G + +V ++ + N L+ L V Sbjct: 218 ------LTVEDIDRLKFGRHFRLSPTAKIIVGRNAQENELISYFKKPGEFLAKVEGFTGP 271 Query: 292 LHWVDREPFTGTMRCTVKT--RYRQTDIPCTVKALDDDRI 329 + P K RY T + +D + Sbjct: 272 TTLIQGNPTEDDFYLAAKVTARYADTPEASVSVRIWNDSV 311 >UniRef50_A0LH53 Putative tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase / fibronectin/fibrinogen-binding protein n=1 Tax=Syntrophobacter fumaroxidans MPOB RepID=A0LH53_SYNFM Length = 329 Score = 141 bits (355), Expect = 5e-32, Method: Composition-based stats. Identities = 59/353 (16%), Positives = 117/353 (33%), Gaps = 53/353 (15%) Query: 1 MSETAKKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYCTAAADLADAQA 60 M+ K I +SGG+DS ++A +L+ Q ++ G+ K G+ Sbjct: 1 MTSRKAKGIGLISGGLDSMLAARVLKDQELELIGIIFKTPFFGPGQG-----------MD 49 Query: 61 VCDKLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLG 120 V +GI + ++F + + Y G NP I C+ + +A E G Sbjct: 50 VGRTVGIPVRVIDFTDRHLQMLKNPV---YGYGSQMNPCIDCHALMLREA--GRVMEREG 104 Query: 121 ADYIATGHYVRRADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFP----------- 169 AD++ TG + + + + LR ++ + + A+ L P Sbjct: 105 ADFLFTGEVLGQRPMSQRRDSLRSVEKL---CGYPGRVLRPLSAKLLPPTVVEIEGLVDR 161 Query: 170 -----VGELEKPQVRKIAEDLGLVTAKKKDSTGICFIGERKFREFLGRYLPAQP--GKII 222 + + + +A G+ + G C + + F L P G Sbjct: 162 ERLLDIHGRSRKRQEALARHYGITDYPQP--GGGCMLTKEGFARRLKELFARYPEAGP-R 218 Query: 223 TVDGDEIGEH---QGLMYHTLGQRKGLGIGGTKEGTEE--PWYVVDKDVENNILVVAQGH 277 V+ + G H G +G+ + + E V D +++ + Sbjct: 219 EVELLKWGRHFALPGGSICIIGRNEADNSRLAQFAGPEDIVLRVADYPSPTGVVIASPSA 278 Query: 278 EHPRLMSVGLIAQQLHWVDREPFTGTMRCTVKTRYRQTDIPCTVKALDDDRIE 330 + ++ + VK +R+ + T+ DR+E Sbjct: 279 DRDLQLAAA--------IVTAYSDCPRDVPVKVSWRRGETSGTLSGPPSDRLE 323 >UniRef50_A5G9E7 Thiamine biosynthesis protein n=4 Tax=Bacteria RepID=A5G9E7_GEOUR Length = 334 Score = 140 bits (354), Expect = 6e-32, Method: Composition-based stats. Identities = 60/347 (17%), Positives = 119/347 (34%), Gaps = 57/347 (16%) Query: 5 AKKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFM--KNWEEDDGEEYCTAAADLADAQAVC 62 KK + +SGG+DS+++ ++ +QG VE L C + A V Sbjct: 2 QKKALALLSGGLDSTLAVKVMLEQGIAVEALNFTSPFCTCTGKNSGCKSE-----AVRVA 56 Query: 63 DKLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGAD 122 ++ I + ++ EY + V + ++ G+ NP I C + KA + + GAD Sbjct: 57 EEFNIPIKVMHKGVEYLEIVGKP---KHGYGKGMNPCIDCRIFLLRKA--KEYMAESGAD 111 Query: 123 YIATGHYVRRADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFP------------- 169 ++ TG + + + + LR ++ +S L A+ P Sbjct: 112 FVITGEVLGQRPMSQRRDTLRLIER---ESGLEGLLLRPLSAKHFNPTIPETEGWVDRER 168 Query: 170 ---VGELEKPQVRKIAEDLGLVTAKKKDSTGICFIGERKFREFLGRYLPAQ-PGKIITVD 225 + + + ++A+DL + G C + E F + + Sbjct: 169 LLAIQGRSRKEQMQLADDLDVKNYPCP--AGGCLLTELSFVSKVKDVFDHSDTLNLRDFR 226 Query: 226 GDEIGEHQGLMYHTLGQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSV 285 ++G H +G R +V ++ N ++ ++ Sbjct: 227 LLKLGRH-----FRIGSRTKA--------------IVGRNEAENNVLETAVQAGEAILRW 267 Query: 286 GLIAQQLHWVDREPFTGTMRCTVKT--RYR--QTDIPCTVKALDDDR 328 + L V + + K RY + CT+K + D R Sbjct: 268 DEGSSPLTVVMGKLDDTKLENAAKILLRYTRAEPGQECTIKFVIDSR 314 >UniRef50_A9A2U4 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase n=2 Tax=Thaumarchaeota RepID=A9A2U4_NITMS Length = 337 Score = 139 bits (351), Expect = 1e-31, Method: Composition-based stats. Identities = 60/337 (17%), Positives = 116/337 (34%), Gaps = 58/337 (17%) Query: 2 SETAKKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYCTAAADLADAQAV 61 + KKV+ +SGG+DS ++ ++Q+QG+ V + +K D + Sbjct: 4 EKEKKKVVALLSGGLDSQLAVRMMQEQGFDVSAVAIKTPFCDFDCGRGCGFE----IRER 59 Query: 62 CDKLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGA 121 D L + L TV EY + + ++ G NP I C + A + E++GA Sbjct: 60 ADDLNVNLKTVYLGDEYIEMLKNP---KHGIGAGFNPCIDCRAMMFDAA--KKHMEEIGA 114 Query: 122 DYIATGHYVRRADVDGKSRLLRGLDSNKD--------QSYFL---------YTLSHEQIA 164 ++I +G + + + LR ++ D S L + E + Sbjct: 115 EFIVSGEVLGQRPMSQHRPALRTIEKESDLVGKIVRPLSAALLPETIPEKEGLIKRENLG 174 Query: 165 QSLFPVGELEKPQVRKIAEDLGLVTAKKKDSTGICFIGERKFR---EFLGRYLPAQPGKI 221 + + +A+ G+ ++ G C + E +F + L ++ I Sbjct: 175 M----IRGRTRRNQLDMAKQYGIEN--PPNAGGGCLLTEPQFGIKAKDLFNHVENP--TI 226 Query: 222 ITVDGDEIGEHQGLMYHTLGQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPR 281 +D +IG H EE +VV ++ + N ++ A + Sbjct: 227 NDIDLLKIGRH-------------------FRLDEETKFVVGRNKDENEMIKAIALPNDI 267 Query: 282 LMSVGLIAQQLHWVDREPFTGT--MRCTVKTRYRQTD 316 L+ + + V RY Sbjct: 268 LLEAKDHVGPTSILRGKNAKDHTKFAAAVTLRYSDAP 304 >UniRef50_B5YF97 tRNA methyl transferase n=1 Tax=Dictyoglomus thermophilum H-6-12 RepID=B5YF97_DICT6 Length = 327 Score = 136 bits (342), Expect = 1e-30, Method: Composition-based stats. Identities = 58/323 (17%), Positives = 111/323 (34%), Gaps = 54/323 (16%) Query: 4 TAKKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYCTAAADLADAQAVCD 63 + I +SGG+DS ++ WL+ QQG +V G+ T +L + C+ Sbjct: 2 KKVRAISLISGGLDSILATWLILQQGIEVIGVTF-----------YTPFFNLELPKKACE 50 Query: 64 KLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGADY 123 L I LH V+ EY + + G+ NP I C+ + KA + AD+ Sbjct: 51 FLNIPLHVVDITEEYMAILKNP---RFGYGKNMNPCIDCHTFMVKKA--KELLPKFDADF 105 Query: 124 IATGHYVRRADVDGKSRLLRGLDS-NKDQSYFLYTLSHEQIAQS------------LFPV 170 I TG + + + LR ++ + + L LS + + + L + Sbjct: 106 IITGEVLGERPMSQNKQSLRLVEKYSGTEDILLRPLSAKLLPPTKPEREGWVDREKLLDI 165 Query: 171 GELEKPQVRKIAEDLGLVTAKKKDSTGICFIGERKFREFLGRYLPA-QPGKIITVDGDEI 229 + ++A+ +GL + G C + E F L L + + +I Sbjct: 166 KGRSRKVQLELAKKIGL--KEIPTPAGGCLLTEPNFSRRLKDLLEHSKNFDKRDLKLLKI 223 Query: 230 GEHQGLMYHTLGQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIA 289 G H + +V ++ E N +++ E+ ++ Sbjct: 224 GRH-------------------LRINDNTKVIVGRNKEENEKILSLARENDTILKAT-EP 263 Query: 290 QQLHWVDREPFTGTMRCT--VKT 310 + V + + Sbjct: 264 SPITIVPNKIIEDEKELQEVARI 286 >UniRef50_B9LAC4 Thiamine biosynthesis protein:ExsB n=2 Tax=Nautiliaceae RepID=B9LAC4_NAUPA Length = 319 Score = 136 bits (342), Expect = 1e-30, Method: Composition-based stats. Identities = 48/247 (19%), Positives = 100/247 (40%), Gaps = 26/247 (10%) Query: 7 KVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYCTAAADLADAQAVCDKLG 66 K I SGG+DS+++ L+Q+Q ++EG+++ E T Q + D+LG Sbjct: 2 KAIALFSGGLDSALAIKLIQEQNIEIEGVYIDVGFE-------TNKQKTEHLQKLADELG 54 Query: 67 IELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGADYIAT 126 I+L ++ +Y + F Y G+ NP I C+ + A + + A +I + Sbjct: 55 IKLTVLDIKEQYIKEIL--FNPVYGYGKNMNPCIDCHANMIRVA--KEYMKKTDAKFIIS 110 Query: 127 GHYVRRADVDGKSRLLRGLDSNKD-QSYFLYTLSHEQIAQS------------LFPVGEL 173 G V + + + L ++ + + L LS + + + L + Sbjct: 111 GEVVGQRPMSQRLPALNAVNKLANAEGLVLRPLSAKLLPPTVPEIEGWVERDKLLGISGR 170 Query: 174 EKPQVRKIAEDLGLVTAKKKDSTGICFIGERKFREFLGRYLPAQPGKIITVDGDEIGEHQ 233 ++ ++A+ GL + G C + + F + L + +D ++G H Sbjct: 171 DRKIQLELAKKYGLENFESP--GGGCLLTDINFSKRLKDFSKTLQLTPHEIDILKVGRHF 228 Query: 234 GLMYHTL 240 + + + Sbjct: 229 NIDGYKI 235 >UniRef50_Q3AD58 Putative uncharacterized protein n=1 Tax=Carboxydothermus hydrogenoformans Z-2901 RepID=Q3AD58_CARHZ Length = 332 Score = 135 bits (340), Expect = 3e-30, Method: Composition-based stats. Identities = 51/337 (15%), Positives = 102/337 (30%), Gaps = 52/337 (15%) Query: 5 AKKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYCTAAADLADAQAVCDK 64 + + SGG+DS ++ + Q+ G V L N + + + Sbjct: 2 NNRALALFSGGLDSILAIKVSQRAGADVTALHFINPFV--------SEVKTEYIKEKAKE 53 Query: 65 LGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGADYI 124 LG+ L +Y + + + +Y G+ NP I C + KA + A ++ Sbjct: 54 LGVPLILEPLGDDYLEIILKP---KYGYGKAMNPCIDCRAFMLKKA--KELLPKYNASFL 108 Query: 125 ATGHYVRRADVDGKSRLLRGLDSNKDQSYFLY---------TLSHEQIA-----QSLFPV 170 +G + + ++ L E++ + L Sbjct: 109 ISGEVLGQRPKSQMRHSMQQTAREAGVEDILVRPLTAKNLPPTLPERLGIIDREKLLDFS 168 Query: 171 GELEKPQVRKIAEDLGLVTAKKKDSTGICFIGERKFREFLGRYLPAQPGKIITVDGDEIG 230 G KPQ+ +A +LG+ G C + + ++ + L + + + Sbjct: 169 GRNRKPQM-ALARELGI--QNYPSPAGGCLLTQVEYGKKLKDLINHGQYDLREI------ 219 Query: 231 EHQGLMYHTLGQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVG-LIA 289 K L IG + +V ++ E N + A + LM V Sbjct: 220 -------------KRLNIGRQFRLSHGAKLIVGRNHEENEALKASAKDSDILMRVQNFKG 266 Query: 290 QQLHWVDREPFTGTMRCTVKT--RYRQTDIPCTVKAL 324 + ++ + RY V Sbjct: 267 PLAVLTGNDISYVALKTAARITARYADCPKEQKVTVT 303 >UniRef50_B3T5L4 Putative uncharacterized protein n=2 Tax=environmental samples RepID=B3T5L4_9ARCH Length = 352 Score = 133 bits (335), Expect = 1e-29, Method: Composition-based stats. Identities = 56/327 (17%), Positives = 116/327 (35%), Gaps = 56/327 (17%) Query: 11 GMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYCTAAADLADAQAVCDKLGIELH 70 +SGG+DS+++ +Q+QG++V + +K D D LG++L Sbjct: 28 LLSGGLDSTLAVKTMQKQGFEVSAVAIKTPFCDFDCGRGCGFEIREK----ADNLGVDLK 83 Query: 71 TVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGADYIATGHYV 130 TV EY + + +Y G NP I C + F+A + E++GA++I +G + Sbjct: 84 TVYLGDEYVEMLKHP---KYGFGSGMNPCIDCRAMM-FEA-GKKHMEEIGAEFIISGEVL 138 Query: 131 RRADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFP----------------VGELE 174 + + L + S + A L P + Sbjct: 139 GQRPMSQ---FAPALKKIEKLSGLEGKIVRPLSAALLPPTDPEKNGLIKRKDLGMIRGRS 195 Query: 175 KPQVRKIAEDLGLVTAKKKDSTGICFIGERKFR---EFLGRYLPAQPGKIITVDGDEIGE 231 + + ++A++ G+ ++ G C + + F + L +++ + +D +IG Sbjct: 196 RKEQLRMAKEFGIED--PPNAGGGCLLTDPAFSLRAKDLFKHIETP--TMNDIDLLKIGR 251 Query: 232 HQGLMYHTLGQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQ 291 H L + L VV ++ + N ++ ++ L+ Sbjct: 252 H-----FRLDKNAKL--------------VVGRNKDENEMIKVLALQNDILLEAKEHVGP 292 Query: 292 LHWVDREPFTGTMRC--TVKTRYRQTD 316 + + +V RY Sbjct: 293 TTLLRGNNIDSHVELSASVTLRYSDAP 319 >UniRef50_A1AMX6 Thiamine biosynthesis protein n=4 Tax=Desulfuromonadales RepID=A1AMX6_PELPD Length = 335 Score = 133 bits (334), Expect = 1e-29, Method: Composition-based stats. Identities = 56/276 (20%), Positives = 101/276 (36%), Gaps = 47/276 (17%) Query: 5 AKKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYCTAAADLAD--AQAVC 62 +K + SGG+DS ++ L+Q+QG +VE + C++ D A V Sbjct: 2 KRKALALFSGGLDSILAVRLMQEQGIEVEAVSFVLPFFS-----CSSDGTERDLAAARVA 56 Query: 63 DKLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGAD 122 LGI + +NF E+ + + + G+ NP I C + KA + GAD Sbjct: 57 RHLGIPIWVINFGPEFLELIRNPL---HGYGKAVNPCIDCRIHMLVKAREQMV--KCGAD 111 Query: 123 YIATGHYVRRADVDGKSRLLRGLDSNKDQSYFL-----------------YTLSHEQIAQ 165 +I TG + + + + + ++ L + E++A Sbjct: 112 FIITGEVLGQRPMSQRRDTMSVVERESGLEGLLLRPLSALHFEPTIPEREGWVDRERLAA 171 Query: 166 SLFPVGELEKPQVRKIAEDLGLVTAKKKDSTGICFIGERKF----REFLGRYLPAQPGKI 221 + + + ++A++LG + + G C + E F R+ P Sbjct: 172 ----IKGRSRKEQMRLADELG--VTEYPNPGGGCLLTEVSFAPKVRDLFEHCDQLDP--- 222 Query: 222 ITVDGDEIGEHQGLMYHTLGQRKGLGIGGTKEGTEE 257 IG H LG+R L IG + + Sbjct: 223 RDFRLLRIGRH-----FRLGERCKLIIGRDERDNKR 253 >UniRef50_UPI000197A71F tRNA-specific 2-thiouridylase MnmA n=1 Tax=Helicobacter canadensis MIT 98-5491 RepID=UPI000197A71F Length = 155 Score = 132 bits (332), Expect = 2e-29, Method: Composition-based stats. Identities = 44/154 (28%), Positives = 69/154 (44%), Gaps = 11/154 (7%) Query: 211 GRYLPAQPGKIITVDGDEIGEHQGLMYHTLGQRKGLGIGGTKEGTEEPWYVVDKDVENNI 270 + Q G ++ G++IG H+G M +T+G+RKG I G P YV+ + ++N Sbjct: 6 KHHKTEQKGDVLDSKGNKIGTHKGYMQYTIGKRKGFTIKGAL----TPHYVLKINPQDNT 61 Query: 271 LVVAQGHEHPRLMSVGLIAQQLHWVDREPFTGT-MRCTVKTRYRQTDIPCTVKALDDDRI 329 ++ E L + + A L + C VK RY+ IP + + + Sbjct: 62 IIAGSKEE---LATNKVQALNLSLPKEWFQDNKVLDCEVKIRYKSHKIPAQITLMSNGNQ 118 Query: 330 EVI---FDEPVAAVTPGQSAVFYNGEVCLGGGII 360 ++I E V GQ+ V YNG LGGG I Sbjct: 119 DIITANLKESAYGVANGQALVLYNGNEVLGGGFI 152 >UniRef50_B2VAD6 Thiamine biosynthesis protein n=6 Tax=Aquificales RepID=B2VAD6_SULSY Length = 355 Score = 131 bits (331), Expect = 3e-29, Method: Composition-based stats. Identities = 54/296 (18%), Positives = 105/296 (35%), Gaps = 49/296 (16%) Query: 5 AKKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEE--DDGEEYCTAAAD----LADA 58 +K + SGG+DS+++ L+Q QG V L + D + A Sbjct: 2 KRKAVALYSGGLDSTLAIKLVQNQGIDVLALHFYTGFCITETKRRRGEKKEDGSHYMNPA 61 Query: 59 QAVCDKLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAED 118 K G L V+ + Y D + +Y G NP I C + KA + ++ Sbjct: 62 LKYAAKYGFPLEIVDISDGYMDVILNP---KYGYGANINPCIDCRIYMFKKA--KEIMQE 116 Query: 119 LGADYIATGHYVRRADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFP--------- 169 +GAD++ +G + + KS L+ ++ +S + A+ L P Sbjct: 117 VGADFVISGEVLGQRPKSQKSIPLKIIEK---ESGLEGLILRPLSAKKLPPTIPEINGWV 173 Query: 170 -------VGELEKPQVRKIAEDLGLVTAKKKDSTGICFIGERKFREFLGRYLPAQPGKII 222 + + + ++A++L + + + G C++ + + + GKI Sbjct: 174 DREKLEGIVGRSRKRQIELAKELEIDEYESP-AGGCCYLTDENYAYKYKETMEI-EGKIT 231 Query: 223 TVDGDEIGEHQGLMYHTLGQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHE 278 D L+ T+G+ L G +V ++ N + Sbjct: 232 QDD---------LVLFTVGRHFRLDSGIKL--------IVSRNEGENNFLSGFKKN 270 >UniRef50_B2TJM2 Argininosuccinate synthase n=30 Tax=Bacteria RepID=B2TJM2_CLOBB Length = 330 Score = 130 bits (328), Expect = 6e-29, Method: Composition-based stats. Identities = 50/245 (20%), Positives = 102/245 (41%), Gaps = 42/245 (17%) Query: 7 KVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYCTAAADLADAQAVCDKLG 66 K + +SGG+DS ++A L+++QG +V G+ K++ ++ +A+ + +++G Sbjct: 3 KALAMISGGLDSILAAKLIKEQGIEVIGICFKSYFFNE-----------ENAKRMTEQIG 51 Query: 67 IELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIK--FKAFLEFAAEDLGADYI 124 I+L ++F+ E++D V ++ G+ NP I C+ + LE AD+I Sbjct: 52 IKLEVIDFSEEHFDLVRNP---KHGWGKNMNPCIDCHSMMMNYSGKLLE----KFNADFI 104 Query: 125 ATGHYVRRADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFP--------------- 169 TG + + + + L+ K +S + + AQ+L P Sbjct: 105 ITGEVLNQRPMSQN---RQALNIVKKESGYSDKILRPLCAQNLNPTQMEIDGLVDREKLL 161 Query: 170 -VGELEKPQVRKIAEDLGLVTAKKKDSTGICFIGERKFREFLGRYLPAQPG-KIITVDGD 227 + + ++AE G+ G C + E + L + + +D Sbjct: 162 KISGRSRAIQMELAEKWGIKDY--PSPAGGCKLTEPNYSIRLRELVNRKSDITQREIDLL 219 Query: 228 EIGEH 232 + G H Sbjct: 220 KYGRH 224 >UniRef50_Q0AXT2 Putative uncharacterized protein n=1 Tax=Syntrophomonas wolfei subsp. wolfei str. Goettingen RepID=Q0AXT2_SYNWW Length = 328 Score = 130 bits (328), Expect = 6e-29, Method: Composition-based stats. Identities = 72/361 (19%), Positives = 128/361 (35%), Gaps = 69/361 (19%) Query: 7 KVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYCTAAADLADAQAVCDKLG 66 K + SGG+DS ++A L+++QG V G+ + A A +LG Sbjct: 2 KAVCLFSGGLDSQLAAALVKKQGVTVIGVNF-------SSPFFGANRATHMA---AKELG 51 Query: 67 IELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEI--KFKAFLEFAAEDLGADYI 124 I+L ++ EY + V + + Y G+ NP I C+ + K F+ + L A ++ Sbjct: 52 IQLFVLDTGKEYIEEVLKNPV--YGYGKNFNPCIDCHGYMLRKAGEFM----QKLDASFL 105 Query: 125 ATGHYVRRADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQS----------------LF 168 +G + + + L +D S F + A+ L Sbjct: 106 ISGEVLGQRPMSQNRSALNAVDKL---SGFRGLVLRPLSARLLPATIPETEGWVDREQLM 162 Query: 169 PVGELEKPQVRKIAEDLGLVTAKKKDSTGICFIGERKFREFLGRYLPAQPG-KIITVDGD 227 + + + ++AE LG+ G C + E F L + L +P + ++ Sbjct: 163 DISGRGRTRQIELAEKLGI--YDYPTPAGGCLLTEASFSRRLKKLLELKPELEAGEMEIL 220 Query: 228 EIGEHQGLMYHTLGQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGL 287 ++G H ++ LG R L +G NI +A+G + L V Sbjct: 221 KLGRH----FY-LGDRTLLAVGRNHSEN------------ENIQKIARGDD--YLFKVLD 261 Query: 288 IAQQLHWVDRE--PFTGTMRCTVKT--RYRQ--TDIPCTVKALDDDRIEVIFDEPVAAVT 341 L + + P + RY + VK F+ +VT Sbjct: 262 RPGPLGILRGDDAPQADEINLAAAIVARYSDARKENMAQVKIFKPG--HETFET--ISVT 317 Query: 342 P 342 P Sbjct: 318 P 318 >UniRef50_A7H7A3 Thiamine biosynthesis protein n=7 Tax=Bacteria RepID=A7H7A3_ANADF Length = 351 Score = 128 bits (322), Expect = 3e-28, Method: Composition-based stats. Identities = 70/373 (18%), Positives = 132/373 (35%), Gaps = 60/373 (16%) Query: 1 MSETAKKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYCTAAAD-----L 55 M + K I +SGG+DS+++ L+++QG +V+ + + Sbjct: 1 MPKQG-KAIAMISGGLDSTLALALVRRQGVEVKAVTFYTGFCITETQRRKGGRADGAVPR 59 Query: 56 ADAQAVCDKLGIELHTVNFA-AEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEF 114 +A L +++ V+ + +EY D + +Y G NP + C + KA + Sbjct: 60 NEALRAAADLEVDIEYVDISGSEYLDMLVHP---KYGYGANANPCVDCRVFMMRKA--KE 114 Query: 115 AAEDLGADYIATGHYVRRADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFP----- 169 E GAD+I TG + + + LR ++ + S L A+ L P Sbjct: 115 IMEAEGADFIFTGEVLGQRPKSQRRDTLRIIERD---SGLDGRLLRPLSAKLLQPTIAEQ 171 Query: 170 -----------VGELEKPQVRKIAEDLGLVTAKKKDSTGICFIGERKFR----EFLGRYL 214 + + + ++A +LG+V + + G C++ + F + L Sbjct: 172 EGIVDRERLEAISGRSRQRQMELARELGVVDWPQP-AGGCCYLTDESFAKKFFDVLDARE 230 Query: 215 PAQPGKIITVDGDEIGEHQGLMYHTLGQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVA 274 A + I + + L G + VV + N L+ Sbjct: 231 AAGEERRILPEDVVL----------------LSTGRHFRLSPRAKLVVGRTEVENALLEH 274 Query: 275 QGHEHPRLMSVGLIAQQLHWVDREPFTGTMRCTVKT--RY--RQTDIPCTVKALDDD--- 327 RL + + + V+ EP + RY + TV+ + D Sbjct: 275 HVEGRARLEAQDV-LGPVAIVEGEPTWEERVLASRIVARYGKGKDAPRVTVEWREGDLVE 333 Query: 328 RIEVIFDEPVAAV 340 R EV ++ A V Sbjct: 334 RYEVEPEQDEARV 346 >UniRef50_Q1K1V6 Thiamine biosynthesis protein n=2 Tax=Desulfuromonadales RepID=Q1K1V6_DESAC Length = 324 Score = 128 bits (321), Expect = 4e-28, Method: Composition-based stats. Identities = 54/310 (17%), Positives = 100/310 (32%), Gaps = 49/310 (15%) Query: 12 MSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYCTAAADLADAQAVCDKLGIELHT 71 SGG+DS ++A LL++QG V L DD A AQ + + + L Sbjct: 8 FSGGLDSILAALLLRKQGVDVHCLCFVTPFFDD-----------AKAQEMAARYDLPLQV 56 Query: 72 VNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGADYIATGHYVR 131 ++ + E+ + Y G+ NP I C+ ++ E+ G D++ +G + Sbjct: 57 MDISEEHLKMLKNP---RYGYGKNMNPCIDCHAQMF--EIAGRLMEEQGYDFLFSGEVLG 111 Query: 132 RADVDGKSRLLRGLDSNKDQSY-FLYTLSHEQIAQSLF------------PVGELEKPQV 178 + L ++ S L LS + + + + + + Sbjct: 112 QRPKSQIHTALMAVNKASGWSGRILRPLSAKLLPITPMEEQGLVDREQLEDIQGRSRKRQ 171 Query: 179 RKIAEDLGLVTAKKKDSTGICFIGERKFREFLGRYLPAQPGKIITVDGDEIGEHQGLMYH 238 +A +LG K S G C + E F L QP Sbjct: 172 EALARELG--VDKYPSSGGGCLLTENSFSGRLRDLFEHQP------------------DC 211 Query: 239 TLGQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLHWVDRE 298 T + L +G ++ + ++ NN + + L+ + L V + Sbjct: 212 TSQDVELLKLGRPFRLSDTAKLTLGRNQSNNEGLKKIVGDSGCLLRNQNFSGPLGVVSGQ 271 Query: 299 PFTGTMRCTV 308 Sbjct: 272 ASEEDYLAAA 281 >UniRef50_A5TXN2 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase n=16 Tax=Fusobacterium RepID=A5TXN2_FUSNP Length = 337 Score = 125 bits (313), Expect = 4e-27, Method: Composition-based stats. Identities = 57/352 (16%), Positives = 122/352 (34%), Gaps = 57/352 (16%) Query: 1 MSETAKKV--IVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYCTAAADLADA 58 M ++ +K+ + SGG+DS+++ ++Q+QG +V L + A Sbjct: 1 MKDSMEKIKALALFSGGLDSALAIKVVQEQGIEVIALNFVSHFFGGKN---------EKA 51 Query: 59 QAVCDKLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAED 118 +++ +LGI L ++F + V + Y G+ NP I C+ + E+ Sbjct: 52 ESMAKQLGIRLEYIDFKKRHTLVVEDPV---YGRGKNMNPCIDCHSLMF--KIAGELLEE 106 Query: 119 LGADYIATGHYVRRADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFP--------- 169 GA ++ +G + + + S+ L+ K S + A+ L P Sbjct: 107 YGASFVISGEVLGQRPMSQNSQ---ALEKVKKLSGMEDLVLRPLSAKLLPPSKAEVMGWV 163 Query: 170 -------VGELEKPQVRKIAEDLGLVTAKKKDSTGICFIGERKFREFLGRYLPAQPGKII 222 + + + ++ + GL + G C + + + L K++ Sbjct: 164 DREKLLDINGRSRQRQMELMDFYGL--VEYPSPGGGCLLTDPGYSNRL---------KVL 212 Query: 223 TVDGDEIGEHQGLMYHTLGQRKGLGIGGTKEGTEEPWYVVDKDVENNI-LVVAQGHEHPR 281 DG EH K + ++ + V ++ E+N + + ++ Sbjct: 213 EDDGLLKEEHA--WLF-----KLIKEARFFRFSKARYLFVGRNKESNDKIDEFRKEKNLN 265 Query: 282 LMSVGLIAQQLHWVDREPFTGTMRCTVK---TRYRQTDIPCTVKALDDDRIE 330 H + T K +RY + V + ++E Sbjct: 266 FYIYSSEVPGPHIIANTNLTDEEIEFAKKLFSRYSKVKGNEKVILNNSGKLE 317 >UniRef50_B5YHJ9 Conserved protein n=1 Tax=Thermodesulfovibrio yellowstonii DSM 11347 RepID=B5YHJ9_THEYD Length = 320 Score = 124 bits (311), Expect = 7e-27, Method: Composition-based stats. Identities = 48/346 (13%), Positives = 116/346 (33%), Gaps = 58/346 (16%) Query: 7 KVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYCTAAADLADAQAVCDKLG 66 K + SGG+DS +S ++++Q V L + D A+ + Sbjct: 3 KALALYSGGLDSLLSVLIVKEQKVDVIALKFLTGFVSPLK-----EDDFNYAK----QFD 53 Query: 67 IELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGADYIAT 126 E+ ++ + ++ + + + ++ G+ NP I C + +A + A +I T Sbjct: 54 FEIREIDISEKFIEILKKP---KHGYGKNLNPCIDCKILMLKEA--KELMSAYKASFIIT 108 Query: 127 GHYVRRADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFP----------------V 170 G + + + K LL ++ +S + A+ P + Sbjct: 109 GEVISQRPMSQKKELLTVIEK---ESSLQGMILRPLSAKLFPPTKSEIEGVINRNLLYDI 165 Query: 171 GELEKPQVRKIAEDLGLVTAKKKDSTGICFIGERKFREFLGRYLPAQPGKIITVDGDEIG 230 + +A+ G+ + G C + + F + + + + V+ ++G Sbjct: 166 SGRTRKPQIALAKKYGIEKVPQP--AGGCLLTDPSFCKKVKDLMAHNELTLKNVELLKVG 223 Query: 231 EHQGLMYHTLGQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQ 290 H + ++ +V +D + N L+++ ++ L L Sbjct: 224 RH-----FRISEKCKA--------------IVGRDEKENKLILS-KYKGLFLYPSDLK-G 262 Query: 291 QLHWVDREPFTGTMRCTVKTR--YRQTDIPCTVKALDDDRIEVIFD 334 + + + + T Y + V + + I+D Sbjct: 263 PVVLLSGDYSEKEIDITASICVYYSKRKNAEIVIKSETEEQRKIYD 308 >UniRef50_C9RAR5 PP-loop domain protein n=10 Tax=Clostridia RepID=C9RAR5_AMMDK Length = 307 Score = 121 bits (304), Expect = 4e-26, Method: Composition-based stats. Identities = 46/226 (20%), Positives = 87/226 (38%), Gaps = 28/226 (12%) Query: 1 MSETAKKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYCTAAADLADAQA 60 M +V+V +SGG DS V+A++L++ GY+V G F+ E++ + + Sbjct: 43 MLPPGARVVVALSGGKDSLVTAFVLKRLGYEVLGFFVDLGIEENNF----SLDSRRAVED 98 Query: 61 VCDKLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLG 120 C + I L + ++ + E+ + + LC + + A + Sbjct: 99 FCREKEIPLEVFSLKEKFGKTIPEVARRQERI------CALCGVTKR--HLMNEYALAVN 150 Query: 121 ADYIATGHYVRRADVDGKSRLLRGLDSNKDQSYF---LYTLSHEQI-AQSLFPVGELEKP 176 A +ATGH + + L R D Y L L E A+ + P+ + Sbjct: 151 AYALATGHTLDDMAASLLANLTRW-----DLHYLAKGLPVLPPEPGFARKIKPLALQGEK 205 Query: 177 QVRKIAEDLGLVTAKKKDSTGICFIGE---RKFREFLGRYLPAQPG 219 ++ AE G+ K + + E ++++ L PG Sbjct: 206 EILAFAELHGI----KPTTAQCPYAAEAKFKRYKAVLNMLEEKSPG 247 >UniRef50_Q2LUM8 Putative tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase / fibronectin/fibrinogen-binding protein n=1 Tax=Syntrophus aciditrophicus SB RepID=Q2LUM8_SYNAS Length = 333 Score = 121 bits (303), Expect = 5e-26, Method: Composition-based stats. Identities = 54/287 (18%), Positives = 99/287 (34%), Gaps = 60/287 (20%) Query: 4 TAKKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYCTAAADLADAQAVCD 63 K + V SGG+DS ++ ++Q QG +V GL + A+ Sbjct: 10 KVKGIAV-FSGGLDSIIAVKVIQDQGIEVVGLTFETPFFSS-----------RKARDAAR 57 Query: 64 KLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAE---DLG 120 K+G+ L ++ E+ + Y G+ NP I C+ + L+ A + +LG Sbjct: 58 KIGLPLKVLDITEEHLKMLMNP---RYGYGKNLNPCIDCHTLM-----LKIAGDKMSELG 109 Query: 121 ADYIATGHYVRRADVDGKSRLLRGLDSNKDQSYFLYTL-----------SHEQIAQS--- 166 AD+I TG + + + ++L K+ Y Y L E+ + Sbjct: 110 ADFIFTGEVLGQRPMSQGKQML--GVVAKNSGYADYILRPLSAKLLPETKPEREGKINRE 167 Query: 167 -LFPVGELEKPQVRKIAEDLGLVTAKKKDSTGICFIGERKFREFLGRYLPAQPGKIITVD 225 L + + +AE G+ G C + + F + L + Sbjct: 168 MLLDIQGRGRKIQISLAEHYGISDYAPP--AGGCLLTDPMFTKRLRDLFDHKK------- 218 Query: 226 GDEIGEHQGLMYHTLGQRKGLGIGGTKEGTEEPWYVVDKDVENNILV 272 T+ + L G E+ VV ++ +N + Sbjct: 219 -----------DFTIRDIELLKFGRHFRLDEKTKIVVGRNRVDNEAI 254 >UniRef50_B3SFT2 Putative uncharacterized protein (Fragment) n=1 Tax=Trichoplax adhaerens RepID=B3SFT2_TRIAD Length = 116 Score = 120 bits (301), Expect = 8e-26, Method: Composition-based stats. Identities = 39/122 (31%), Positives = 60/122 (49%), Gaps = 9/122 (7%) Query: 242 QRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLHWVDREP-F 300 QRKG+GI K P YV+ D N ++V + + L S L + L+W+ + Sbjct: 1 QRKGIGISNNK-----PLYVIKIDPITNKVIVGEKED---LKSTKLKIKDLNWLSNDEAL 52 Query: 301 TGTMRCTVKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTPGQSAVFYNGEVCLGGGII 360 + C+V+ R +I VK L + +VI P +TPGQ+ V Y+ + LGGG I Sbjct: 53 EKDISCSVRLRSNHKEINADVKYLGNGIADVILKSPYYGITPGQACVIYDKDRVLGGGWI 112 Query: 361 EQ 362 + Sbjct: 113 IK 114 >UniRef50_C0R008 Thiamine biosynthesis protein n=2 Tax=Brachyspira RepID=C0R008_BRAHW Length = 356 Score = 120 bits (301), Expect = 9e-26, Method: Composition-based stats. Identities = 53/249 (21%), Positives = 94/249 (37%), Gaps = 23/249 (9%) Query: 1 MSETAKKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYCTAAADLAD-AQ 59 MS+ K I+ +SGG+DS + +L+++ V L E + D A+ Sbjct: 1 MSDKKAKAILLLSGGLDSMLVGAILKRENIDVLALRFVTGLEYAVIKEELLEIYSEDPAK 60 Query: 60 AVCDKLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDL 119 D L I + V+ Y D +Y G NP + C+ + A + E+ Sbjct: 61 KAADFLNIPIRFVSLKDVYLDMFLNP---KYGYGSAINPCLDCHILMLKTA--KKIMEEE 115 Query: 120 GADYIATGHYVRRADVDGKSR-LLRGLDSNKDQSYFLYTLSHEQIAQS------------ 166 G D+IATG + + KS+ LL + + + L LS + + + Sbjct: 116 GFDFIATGEVKGQRPMSQKSQDLLNAIKESGLEGRLLRPLSAKLLPITKAEEEGLINREN 175 Query: 167 LFPVGELEKPQVRKIAEDLGLVTAKKKDSTGICFIGERKFREFLGRYLPAQPGKII---T 223 L+ + + K+AE+ G+ G C I ++ + + I+ Sbjct: 176 LYDIYGRSRNVQMKLAEEFGITDYPIPAGAG-CAIVDKGYARRYNDLIANNGKDILNIEL 234 Query: 224 VDGDEIGEH 232 + IG H Sbjct: 235 MQYLAIGRH 243 >UniRef50_D1JFA0 Putative uncharacterized protein n=1 Tax=uncultured archaeon RepID=D1JFA0_9ARCH Length = 323 Score = 120 bits (300), Expect = 1e-25, Method: Composition-based stats. Identities = 56/328 (17%), Positives = 105/328 (32%), Gaps = 53/328 (16%) Query: 7 KVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYCTAAADLADAQAVCDKLG 66 K + +SGG+DS ++ L+ QG +V L + A A AV + Sbjct: 2 KALALLSGGLDSILATKLVLDQGLEVVALQLILPFT---------AEKTDYAGAVAKRFE 52 Query: 67 IELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGADYIAT 126 I + V AEY + + +Y G NP I C+ + +A + AE++GA++I T Sbjct: 53 IPIIHVEAGAEYLEIIRNP---KYGYGSGMNPCIDCHSYMLREA--KRIAEEIGAEFIFT 107 Query: 127 GHYVRRADVDGKSRLLRGLDSNKD-QSYFLYTLSHEQIAQS------------LFPVGEL 173 G + + + L D + L LS + + ++ L + Sbjct: 108 GDVLGERPMSQHKKALEIADREAGLEGMVLRPLSAKLLPKTIPECEGWIDRSKLLDIKGK 167 Query: 174 EKPQVRKIAEDLGLVTAKKKDSTGICFIGERKFREFLGRYLPAQPG-KIITVDGDEIGEH 232 + +A L G C + ++F + + I + +IG H Sbjct: 168 SRKVQIALATKFNL---DYPSPAGGCLLTNKEFASKVKDLFTHKETVTKIDLALLKIGRH 224 Query: 233 QGLMYHTLGQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQL 292 +V ++ N L+ + V L Sbjct: 225 --------------------FRLASSKLIVGRNEAENRLLSDLKRPEDYVFEVPGYGSPL 264 Query: 293 HWVDREPFTGTMRCTVKT--RYRQTDIP 318 ++ + + RY + Sbjct: 265 TILEGSKDKEAIELAARLTARYSDARVE 292 >UniRef50_C0QKU7 Putative tRNA, (5-methylaminomethyl-2-thiouridylate)-methyltransferase n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QKU7_DESAH Length = 333 Score = 119 bits (299), Expect = 1e-25, Method: Composition-based stats. Identities = 56/286 (19%), Positives = 94/286 (32%), Gaps = 45/286 (15%) Query: 1 MSETA--KKV-IVGM-SGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYCTAAADLA 56 M E KKV +G+ SGG+DS +SA +L++QG V + Sbjct: 1 MEEKKTLKKVRALGLTSGGLDSILSALVLREQGIDVTWVSFTTPFFSSHA---------- 50 Query: 57 DAQAVCDKLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAA 116 AQ D+ I L V+ Y + + G+ NP + C+ + +A Sbjct: 51 -AQKAADRYKIPLMVVDITEIYIEMLKNPPA---GYGKNMNPCMDCHVLMFAEA--GRIM 104 Query: 117 EDLGADYIATGHYVRRADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFP------- 169 G D++ +G + R LR ++ + S F ++ A L Sbjct: 105 VQEGFDFLFSGEVAGQRPFSQNKRSLRYVEKH---SGFDGSILRPLSAGVLPVTEAERQN 161 Query: 170 ---------VGELEKPQVRKIAEDLGLVTAKKKDSTGICFIGERKFREFLGRYLPAQPGK 220 + + + ++A+ G C + + F L P Sbjct: 162 LVDRNRLGSISGRSRKKQIEMAKQFN--VVDYPAPAGGCRLTDSAFSARLRDLFDLVP-D 218 Query: 221 IITVDGDEIGEHQGLMY-HTLGQRKGLGIGGTKEGTEEPWYVVDKD 265 D + H G + G R +G G E YV + D Sbjct: 219 FGKRDLYLL--HHGRHFRLDPGTRIVVGRSEADNGMIETLYVPETD 262 >UniRef50_UPI000185D146 tRNA(Ile)-lysidine synthetase n=1 Tax=Capnocytophaga sputigena ATCC 33612 RepID=UPI000185D146 Length = 415 Score = 119 bits (299), Expect = 2e-25, Method: Composition-based stats. Identities = 43/214 (20%), Positives = 71/214 (33%), Gaps = 29/214 (13%) Query: 4 TAKKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYCTAAADLADAQAVCD 63 KK++V +SGG+DS V LL G ++ + D A + Sbjct: 8 KNKKILVAISGGIDSVVLTHLLHFHGTELLLAHCNF-----QLRGEESDGDEAFVRNFAK 62 Query: 64 KLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGADY 123 LGI L F EY N L +E++++ F E E D Sbjct: 63 TLGIPLEVKRFDT-----------KEYAKAHQLNT-QLAARELRYEWFYELL-ETHHCDA 109 Query: 124 IATGHYVRRADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQVRKIAE 183 +AT H+ L RG + L + Q + + P+ + + Q+ AE Sbjct: 110 LATAHHANDNLETFLINLSRGSGLDG-----LLGIPQ-QTDKIVRPLLQWSRQQIYDYAE 163 Query: 184 DLGLVTAKKKDSTGICFIGERKFREFLGRYLPAQ 217 L + + + R + + Q Sbjct: 164 AHELQWREDSSNA-----SNKYVRNVIRHEIIPQ 192 >UniRef50_C6HXU2 Thiamine biosynthesis protein n=1 Tax=Leptospirillum ferrodiazotrophum RepID=C6HXU2_9BACT Length = 344 Score = 119 bits (298), Expect = 2e-25, Method: Composition-based stats. Identities = 55/282 (19%), Positives = 104/282 (36%), Gaps = 52/282 (18%) Query: 7 KVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYCTAAADLADAQAVCDKLG 66 K ++ +SGG+DS++S LL++ G ++ L + + C + A+ + ++G Sbjct: 3 KGVLLLSGGLDSTLSGLLLRRMGVELVALHL------ESPFGCDS-----MAETMAKEIG 51 Query: 67 IELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGADYIAT 126 I L + D + Y G NP + C + E++GA ++ T Sbjct: 52 IPLVVRPKGEAFLDMLGHP---RYGYGSAMNPCVDCRIHMFR--MGRSFMEEVGASFLVT 106 Query: 127 GHYVRRADVDGKSRLLRGLDS-NKDQSYFLYTLSHEQIA------------QSLFPVGEL 173 G + + + K R + +D+ + + L LS + + LF Sbjct: 107 GEVLGQRPMSQKKRAIVSIDADSGMEGLVLRPLSARLLPETLPERDGTVDRKKLFGWAGR 166 Query: 174 EKPQVRKIAEDLGLVTAKKKDSTGICFIGERKFREFLGRYLPAQPGKIITVDGDEIGEHQ 233 + +A LGL T G C + + F + +G ++ I ++ Sbjct: 167 SRKPQLALAARLGLSTI--PSPAGGCLLTDSHFNDRIGDFV------RIDWSTEKEA--- 215 Query: 234 GLMYHTLGQRKG-----LGIGGTKEGTEEPWYVVDKDVENNI 270 G R+ L G E W VV + +E+N Sbjct: 216 -------GSRREAVASILRYGRHFRFEEGEWVVVGRSLEDNR 250 >UniRef50_C6J5B9 tRNA(Ile)-lysidine synthetase n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6J5B9_9BACL Length = 485 Score = 118 bits (297), Expect = 2e-25, Method: Composition-based stats. Identities = 43/222 (19%), Positives = 79/222 (35%), Gaps = 25/222 (11%) Query: 4 TAKKVIVGMSGGVDSSVSAWLLQQ-QGYQVEGLFMKNWEEDDGEEYCTAAADLADAQAVC 62 ++V +SGGVDS+V ++++ G + GL + G A D + + Sbjct: 25 PGDVIVVAVSGGVDSTVLLHIMKEIAGDKALGLQLICAHLHHGLRGDEADRDAEFVRELA 84 Query: 63 DKLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGAD 122 ++LGI + +V T L +E +++ + AE GA Sbjct: 85 ERLGIPF------ELGYADVRAYMKE------TGQSLELAAREKRYEYLHQ-VAERYGAS 131 Query: 123 YIATGHYVRRADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQ---SLFPVGELEKPQVR 179 IA H+ RLLRG + L + ++ + + P+ + K + Sbjct: 132 SIALAHHADDQAETVLMRLLRGSGPSG-----LAGMRPKRREKNVELIRPLLRIYKTDLL 186 Query: 180 KIAEDLGLVTAKKKDSTGICFIGER---KFREFLGRYLPAQP 218 + + GL + + FLG+Y P Sbjct: 187 QACRESGLAYVEDSSNLDKEMTRNSIRLDVLPFLGQYNGQLP 228 >UniRef50_A7H5Y0 Thiamine biosynthesis protein:ExsB n=29 Tax=Epsilonproteobacteria RepID=A7H5Y0_CAMJD Length = 349 Score = 118 bits (297), Expect = 2e-25, Method: Composition-based stats. Identities = 46/322 (14%), Positives = 102/322 (31%), Gaps = 47/322 (14%) Query: 4 TAKKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYCTAAADLADAQAVCD 63 T K + SGG+DS ++ L+ QG +V+ L + ++ + Sbjct: 21 TQMKALALFSGGLDSMLAMKLITTQGIEVKALNINIGFGSTSDKS-------EIMKKRAA 73 Query: 64 KLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGADY 123 +G + ++ Y V F +Y G+ NP I C+ + A ++ A + Sbjct: 74 MVGADFEMIDVRNSYLQEVL--FNPQYGYGKHFNPCIDCHAFMFKTALAML--KEENASF 129 Query: 124 IATGHYVRRADVDGKSR-LLRGLDSNKDQSYF---------LYTLSHEQIAQS----LFP 169 I TG + + + +S + + D+ L E+ L Sbjct: 130 IITGEVLGQRPMSQRSDAMAKVKKLALDEEDLILRPMCAKNLPLTKPEREGWVDREKLEG 189 Query: 170 VGELEKPQVRKIAEDLGLVTAKKKDSTGICFIGERKFREFLGRYLPAQPG-KIITVDGDE 228 + + + ++A GL + G C + F + + ++ ++ + Sbjct: 190 ISGRSRKRQLELAAKFGLEDFESP--GGGCLLTLDSFAKKIRDFIEFDKDMQVNDAQLLK 247 Query: 229 IGEHQGLMYHTLGQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLI 288 G H ++ ++ N L+ ++ +G + Sbjct: 248 YGRH-------------------LRLPNGAKMIIGRNELENTLLKGLKTPKYEVIELGDL 288 Query: 289 AQQLHWVDREPFTGTMRCTVKT 310 VD + + +K Sbjct: 289 IGAYSLVDEKISEKDLELALKI 310 >UniRef50_C5A2M0 PP-loop ATPase, YdaO-type n=8 Tax=Thermococcaceae RepID=C5A2M0_THEGJ Length = 325 Score = 117 bits (294), Expect = 5e-25, Method: Composition-based stats. Identities = 47/234 (20%), Positives = 87/234 (37%), Gaps = 25/234 (10%) Query: 1 MSETAKKVIVGMSGGVDSSVSAWLLQQQ----GYQVEGLFMKNWEEDDGEEYCTAAADLA 56 + E +++ VG+SGG DS V LL + +++ + + D + Sbjct: 45 LIEKGERIAVGVSGGKDSVVLMHLLAKLREKFPFELVAITI------DEGIAGYRPKSVE 98 Query: 57 DAQAVCDKLGIELHTVNFAAEYWDNVFELFL---AEYKAGRTPNPDILCNKEIKFKAFLE 113 A+ KLGIE +F EY + + ++ G C + L Sbjct: 99 IAKRNARKLGIEHRIYSF-KEYIGFTLDETVGIMGSFERGERVGACSYCGVWRR--WLLN 155 Query: 114 FAAEDLGADYIATGHYVRRADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGEL 173 +AA+D+GAD +A GH + +LRG + ++ Y H ++ + P+ E+ Sbjct: 156 YAAKDVGADKLAVGHNLDDEVQMFIMNILRGDIARLGRTGPYYEEIHPELVPRIKPLREI 215 Query: 174 EKPQVRKIAEDLGLVTAKKKDSTGICFIGERKF----REFLGRYLPAQPGKIIT 223 + ++ A + + C F R++L PG Sbjct: 216 PEKEIVLYAVLNNIEVDLSE-----CPYAVEAFRAEIRDWLNEMEERHPGTKYQ 264 >UniRef50_B2RMB4 tRNA(Ile)-lysidine synthase n=2 Tax=Porphyromonas gingivalis RepID=TILS_PORG3 Length = 454 Score = 117 bits (294), Expect = 6e-25, Method: Composition-based stats. Identities = 31/219 (14%), Positives = 73/219 (33%), Gaps = 24/219 (10%) Query: 1 MSETAKK-VIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYCTAAADLADAQ 59 + + V+V +SGG DS +L++ GY+ + D A + Sbjct: 18 LFREGNRLVLVALSGGADSVALLCVLRELGYETVAAHCNFHL-----RGVESDEDAAFVE 72 Query: 60 AVCDKLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDL 119 +C L + LH ++F + + + + +E++++ F ++L Sbjct: 73 GLCRDLDVPLHRIDFDTVRYARERSISIE------------MAARELRYEWF-GLLRKEL 119 Query: 120 GADYIATGHYVRRADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQVR 179 +Y+A H+ L RG + L + +++ + P+ + + ++ Sbjct: 120 AIEYVAVAHHADDNAETMVLNLCRGTGISG-----LCGMPYKRNDGIVRPLLDATRDEIE 174 Query: 180 KIAEDLGLVTAKKKDSTGICFIGERKFREFLGRYLPAQP 218 D + + F + P Sbjct: 175 AYLLDQKITYRTDSSNEDTRFRRNLVRHRIMPLLKELNP 213 >UniRef50_UPI000197B80A hypothetical protein BACCOPRO_00592 n=2 Tax=Bacteroides RepID=UPI000197B80A Length = 437 Score = 117 bits (294), Expect = 6e-25, Method: Composition-based stats. Identities = 34/215 (15%), Positives = 75/215 (34%), Gaps = 24/215 (11%) Query: 4 TAKKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYCTAAADLADAQAVCD 63 + ++V+V +SGG DS +LQ+ GY++E + D + +C+ Sbjct: 18 SGERVLVALSGGADSVALLCVLQELGYRLEAAHCNFHL-----RGEESDRDERFVRQLCE 72 Query: 64 KLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGADY 123 + I LH ++F+ + ++ + + +E++++ F E + G Sbjct: 73 RRQIPLHVIHFSTGAYAASRKISIE------------MAARELRYRWF-EELRDQGGFRV 119 Query: 124 IATGHYVRRADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQVRKIAE 183 +A H+ + L RG N L + + P+ + + + + Sbjct: 120 VAVAHHRDDSVETLLLNLTRGTGING-----LRGI-RPVNGTVVRPLLGVSREAILTYLD 173 Query: 184 DLGLVTAKKKDSTGICFIGERKFREFLGRYLPAQP 218 LG + + + L P Sbjct: 174 RLGQPYVTDSTNLEDAYARNKIRLNVLPALREINP 208 >UniRef50_C6A3M7 ATPase, PP-loop superfamily n=2 Tax=Euryarchaeota RepID=C6A3M7_THESM Length = 331 Score = 116 bits (292), Expect = 9e-25, Method: Composition-based stats. Identities = 42/234 (17%), Positives = 86/234 (36%), Gaps = 25/234 (10%) Query: 1 MSETAKKVIVGMSGGVDSSVSAWLLQQQ----GYQVEGLFMKNWEEDDGEEYCTAAADLA 56 + + ++ VG+SGG DS V +L + +++ + + D + Sbjct: 53 LIKRGDRIAVGVSGGKDSVVLLHILHKLSQKFPFEIIAITI------DEGIEGYRPESVE 106 Query: 57 DAQAVCDKLGIELHTVNFAAEYWDNVFELFLA---EYKAGRTPNPDILCNKEIKFKAFLE 113 A+ KLGIE +F EY + ++ ++ C + + Sbjct: 107 IAKRNAKKLGIEHKIYSF-KEYIGFSLDETVSIMGSFEKRERVGACSYCGVWRR--WLIN 163 Query: 114 FAAEDLGADYIATGHYVRRADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGEL 173 +AA+DL AD +A GH + ++RG + ++ Y + HE + + P+ E+ Sbjct: 164 YAAQDLEADKLAVGHNLDDEVQMFLMNVMRGDVARLGRTGPYYEVIHEGLVPRIKPLREV 223 Query: 174 EKPQVRKIAEDLGLVTAKKKDSTGICFIGERKF----REFLGRYLPAQPGKIIT 223 + ++ A + + C F R+++ PG Sbjct: 224 PEKEIVLYAILNNIEVDFSE-----CPYAVEAFRAEIRDWINEMEEKHPGTKYQ 272 >UniRef50_Q7M837 TRNA METHYLTRANSFERASE n=6 Tax=Helicobacteraceae RepID=Q7M837_WOLSU Length = 333 Score = 116 bits (291), Expect = 1e-24, Method: Composition-based stats. Identities = 43/238 (18%), Positives = 87/238 (36%), Gaps = 26/238 (10%) Query: 7 KVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYCTAAADLADAQAVCDKLG 66 K + SGG+DS +S L+Q+ G +V L + L Q ++G Sbjct: 2 KALALFSGGLDSLLSMKLIQEMGIEVVALHFNIGFGAN-------RDKLEYLQNATAQIG 54 Query: 67 IELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGADYIAT 126 +EL ++ ++++ V F + G+ NP I C+ + A E GA +I + Sbjct: 55 VELRVLDIQEQFFNEVL--FNPVHGYGKYFNPCIDCHANMFRHAL--RLLEGEGASFIIS 110 Query: 127 GHYVRRADVDGKSR-LLRGLDSNKDQSYFLYTLSHEQIAQS------------LFPVGEL 173 G + + + L + + + + L LS + + + L + Sbjct: 111 GEVIGQRPKSQRREALHQVENLTQTKGLILRPLSAKLLPPTLAEERGWVDREKLLDIHGR 170 Query: 174 EKPQVRKIAEDLGLVTAKKKDSTGICFIGERKFREFLGRYLPAQPGKIITVDGDEIGE 231 + + +A+ G V +K G C + + L + + + + G Sbjct: 171 GRDRQLAMAKSYGWVYFEKP--GGGCLLTDSHVALKLKDITQRRKPVMEDIALVKNGR 226 >UniRef50_A8W1X2 ATPase of the PP-loop superfamily implicated in cell cycle control-like protein n=1 Tax=Bacillus selenitireducens MLS10 RepID=A8W1X2_9BACI Length = 475 Score = 116 bits (291), Expect = 1e-24, Method: Composition-based stats. Identities = 41/239 (17%), Positives = 90/239 (37%), Gaps = 28/239 (11%) Query: 1 MSETAKKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYCTAAADLADAQA 60 + + ++V +SGGVDS V LL ++ ++ + + +A D + Sbjct: 14 LIQAGDHLLVAVSGGVDSMVLLHLLHERRTRLS-ITLSAVHAHHHLRRESADRDAELVAS 72 Query: 61 VCDKLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLG 120 C +L I H V+ + E + + ++++++AF + G Sbjct: 73 FCRELAIPFHLVHLSVEEERKLRNGSVQAV------------ARDLRYEAF-RHVMTETG 119 Query: 121 ADYIATGHYVRRADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQVRK 180 A+ + T H+ +LLR ++ + S L + + P+ + EK + + Sbjct: 120 ANRLVTAHHGDDQIETVLLQLLR--NTAQGGSGMRA-LRPIEGGTLIRPLLDTEKASLYR 176 Query: 181 IAEDLGLVTAKKKDSTGICFIGERKFREFLGRYLPAQPGKIITVDGDEIGEHQGLMYHT 239 A+D G+ + + + + R ++ L PG H+ + +T Sbjct: 177 YAKDSGIPFREDESNDSRHYRRNRIRQDILPVLKEEHPGI-----------HRQIGRYT 224 >UniRef50_C9LEK3 tRNA(Ile)-lysidine synthase n=1 Tax=Prevotella tannerae ATCC 51259 RepID=C9LEK3_9BACT Length = 480 Score = 115 bits (289), Expect = 2e-24, Method: Composition-based stats. Identities = 37/218 (16%), Positives = 75/218 (34%), Gaps = 24/218 (11%) Query: 1 MSETAKKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYCTAAADLADAQA 60 + K+++V +SGG DS +L Q GY E + D A Sbjct: 26 LPVKDKRLLVAVSGGADSVALLRVLHQLGYACEVAHCNFHL-----RGEASDRDAAFVSD 80 Query: 61 VCDKLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLG 120 +C LG+ H +FA E + + + + ++++++ F + AE Sbjct: 81 LCRDLGVPFHLRDFATEAFARSQAVSVE------------MAARDLRYQWFDQLLAER-N 127 Query: 121 ADYIATGHYVRRADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQVRK 180 +A H+ L RG + L + + Q + + P+ ++ + ++ Sbjct: 128 LSAVAVAHHKEDNVETFFLHLARGSGLHG-----LVGMRY-QRGKIIRPLLDVSRREIEA 181 Query: 181 IAEDLGLVTAKKKDSTGICFIGERKFREFLGRYLPAQP 218 +G + + + F R L P Sbjct: 182 WLSAIGQPFVTDETNADVRFKRNRLRNRILPELRQLNP 219 >UniRef50_UPI0001902279 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase n=1 Tax=Mycobacterium tuberculosis GM 1503 RepID=UPI0001902279 Length = 154 Score = 115 bits (288), Expect = 3e-24, Method: Composition-based stats. Identities = 36/144 (25%), Positives = 57/144 (39%), Gaps = 9/144 (6%) Query: 221 IITVDGDEIGEHQGLMYHTLGQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHP 280 ++ DG + H G+ T+GQR+GLGI G P YV D + + V + Sbjct: 2 VVDADGVVLASHDGVHGFTIGQRRGLGIAGPGP-NGRPRYVTAIDADTATVHVGDVTD-- 58 Query: 281 RLMSVGLIAQQLHWVDREPFTGTMRCTVKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAV 340 L L + + +G + C V+ R + + + D + V P+ V Sbjct: 59 -LDVQTLTGRAPVFTAGAAPSGPVDCVVQVRAHGETVSAVAELIG-DALFVQLHAPLRGV 116 Query: 341 TPGQSAVFYN----GEVCLGGGII 360 GQ+ V Y G+ LG I Sbjct: 117 ARGQTLVLYRPDPAGDEVLGSATI 140 >UniRef50_C9MRP4 tRNA(Ile)-lysidine synthase n=1 Tax=Prevotella veroralis F0319 RepID=C9MRP4_9BACT Length = 461 Score = 115 bits (287), Expect = 4e-24, Method: Composition-based stats. Identities = 33/195 (16%), Positives = 71/195 (36%), Gaps = 24/195 (12%) Query: 1 MSETAKKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYCTAAADLADAQA 60 + + +V +SGG DS ++Q GY+ + + + D Q+ Sbjct: 14 LLKPKAHCLVALSGGADSVALLLTMRQLGYETDAVHCNFHL-----RGDESNRDEEYCQS 68 Query: 61 VCDKLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLG 120 +C +L I LH +F + ++ + + +E++++ F + E LG Sbjct: 69 LCKQLNIPLHIAHFDTLTYAEAHKVSIE------------MAARELRYRYFFQ-LKEALG 115 Query: 121 ADYIATGHYVRRADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQVRK 180 AD I GH+ + L+RG S L + + P+ + + ++ + Sbjct: 116 ADAICVGHHQEDSVETILINLVRGTGL----SGMLGIRPKK--GDIVRPLLCVSRKEIEE 169 Query: 181 IAEDLGLVTAKKKDS 195 + + Sbjct: 170 YLHQQAISYVTDSTN 184 Database: uniref50.fasta Posted date: Mar 8, 2010 10:38 AM Number of letters in database: 1,040,396,356 Number of sequences in database: 3,077,464 Lambda K H 0.311 0.148 0.440 Lambda K H 0.267 0.0453 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 2,603,426,570 Number of Sequences: 3077464 Number of extensions: 122950118 Number of successful extensions: 326531 Number of sequences better than 1.0e-01: 250 Number of HSP's better than 0.1 without gapping: 1421 Number of HSP's successfully gapped in prelim test: 2060 Number of HSP's that attempted gapping in prelim test: 318090 Number of HSP's gapped (non-prelim): 3928 length of query: 368 length of database: 1,040,396,356 effective HSP length: 130 effective length of query: 238 effective length of database: 640,326,036 effective search space: 152397596568 effective search space used: 152397596568 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.2 bits) S2: 94 (40.7 bits)