 |
| Job Description | P25745 | | Confidence | 21.26% | Date | Thu Jan 5 11:42:33 GMT 2012 |
| Rank | 251 | Aligned Residues | 36 |
| % Identity | 28% | Template | c3dgpA_ |
| PDB info |
PDB header:transcription | Chain: A: PDB Molecule:rna polymerase ii transcription factor b subunit 2; |
PDBTitle: crystal structure of the complex between tfb5 and the c-terminal2 domain of tfb2
|
| Resolution | 1.80 Å |
|
|   |   |
176 | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | |
|
|
. | . | . | . | . | . | 210 | . | . |
| Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |
|
| . | . | . |
|
|  |  |  |  |  |  |  |
| Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
|
|
|
|
|
|
|
|
|
| Query Sequence |   |
P | Q | V | R | K | I | A | E | D | L | G | L | V | T | A | K | K | K | D | S | T | G | I | C | F | I | G | E | . |
. |
. |
R | K | F | R | E | F | L | G | R |
| Query Conservation |   |
  |
|
|
|   |
|
|   |   |   |
|
|
|   |
|   |
|   |
|
|   |   |
|
|
|
|   |   | . | . | . |   |   |   |   |   |
|
|   |   |
| Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
| Template Conservation |   |
  |   |   |   |   |
|
|   |   |   |
|
|
|
|
|   |
|   |   |
|
|   |   | . |
|
|   |   |   |
|
|   |   |
|
|   |
|   |
|
|
| Template Sequence |   |
N | L | L | S | K | Y | A | Q | D | I | G | V | L | L | W | K | D | D | K | K | K | K | F | . |
F | I | S | K | E | G | N | S | Q | V | L | D | F | A | K | R |
| Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  | T | T |
|  |  |  |  |  | T | T | T | T |  |  | . |  |  |  | G | G | G |  |  |  |  |  |  |  |  | T | T |
| Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |
|
|
|
|  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
| Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |
469 | 470 | . | . | . | . | . | . | . | . | . | 480 | . | . | . | . | . | . | . | . | . | 490 | . | |
. | . | . | . | . | . | . | . | 500 | . | . | . | . | . | . | . |
|   |
No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
|   |
|
|
|