23 c1ni5A_ Probab=99.88   E-value=1.1e-22  Score=180.53  Aligned_columns=179  Identities=17%

Q ss_pred             CCCCCCEEEEEECCCHHHHHHHHHHHH-----CCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEECC
Q ss_conf             987788799997497469999999998-----898099999455666657656787899999999999819819998580
Q batch____         1 MSETAKKVIVGMSGGVDSSVSAWLLQQ-----QGYQVEGLFMKNWEEDDGEEYCTAAADLADAQAVCDKLGIELHTVNFA   75 (368)
Q Consensus         1 M~e~~~rVvValSGGVDSsvaA~LL~~-----~g~eV~gv~m~~~~~~~~~~~~~s~~d~~~a~~va~~LGIp~~vid~~   75 (368)
                      |..+++||+||+|||+||++++++|.+     .++++.++|++++...+      +.++.+.++++|+++|||++++++.
T Consensus         9 ~~~~~~~vlva~SGG~DS~~Ll~~l~~~~~~~~~~~l~~~hvdhglr~~------s~~~~~~v~~~~~~~~i~~~~~~~~   82 (433)
T c1ni5A_           9 QLLTSRQILVAFSGGLDSTVLLHQLVQWRTENPGVALRAIHVHHGLSAN------ADAWVTHCENVCQQWQVPLVVERVQ   82 (433)
T ss_dssp             HHTTCSEEEEECCSBHHHHHHHHHHHHHHTTSTTCEEEEEEECCSCCSS------HHHHHHHHHHHHHHTTCCEEEECCC
T ss_pred             CCCCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCC------HHHHHHHHHHHHHHCCCCEEEEEEE
T ss_conf             7689977999967971179999999998420489669999967588828------5888999999999709968999965


Q ss_pred             HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCEEEECCCCCCCCEEEE
Q ss_conf             57888887888898870888570045457878999999999987997999752024445788200353056665300211
Q batch____        76 AEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGADYIATGHYVRRADVDGKSRLLRGLDSNKDQSYFL  155 (368)
Q Consensus        76 ~~f~~~V~~~~~~~y~~G~tpnpc~~Cn~~ikf~~ll~~~a~~~g~~~IATGHya~~~~~~~~~~l~~g~d~~KDQsyfL  155 (368)
                                     ......|+|..| |..++..|.+.+   .++++|+|||++++..++..+++.+|....-     |
T Consensus        83 ---------------~~~~~~~~e~~a-R~~Ry~~~~~~~---~~~~~i~~aH~~dD~aEt~l~~l~rG~~~~g-----l  138 (433)
T c1ni5A_          83 ---------------LAQEGLGIEAQA-RQARYQAFARTL---LPGEVLVTAQHLDDQCETFLLALKRGSGPAG-----L  138 (433)
T ss_dssp             ---------------CCCSSSTTTTHH-HHHHHHHHHHTC---CTTEEEECCCCHHHHHHHHHHHHTTTCCTTG-----G
T ss_pred             ---------------CCCCCCCHHHHH-HHHHHHHHHHHH---HHCCEEEEEECHHHHHHHHHHHHHCCCCHHH-----C
T ss_conf             ---------------054688998999-999999999998---6098499940435789999998623998433-----3


Q ss_pred             CCCCHHHH---HHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCHHHHHHHHC
Q ss_conf             15788684---200000128998999999998399878888765057606887889999754
Q batch____       156 YTLSHEQI---AQSLFPVGELEKPQVRKIAEDLGLVTAKKKDSTGICFIGERKFREFLGRYL  214 (368)
Q Consensus       156 ~~l~~~~l---~~~ifPLg~l~K~eVr~lA~~~GLp~a~k~eS~~iCFi~~~~~~~fl~~~~  214 (368)
                      ++++...-   .++++||.+++|+||+++|++.|||..+.+++++..|.     |++|++.+
T Consensus       139 ~~~~~~~~~~~~~iiRPLl~~~k~eI~~y~~~~~l~~~eD~sN~~~~y~-----RNriR~~i  195 (433)
T c1ni5A_         139 SAXAEVSEFAGTRLIRPLLARTRGELVQWARQYDLRWIEDESNQDDSYD-----RNFLRLRV  195 (433)
T ss_dssp             GCCCSEEEETTEEEECGGGSCCHHHHHHHHHHTTCCCBCCCCGGGTTSH-----HHHHHHTH
T ss_pred             CCCCCCCCCCCCEEECCCCCCCHHHHHHHHHHCCCCEEECCCCCCCCHH-----HHHHHHHH
T ss_conf             6670002258967980576798999999999808975717898687206-----89998786