123 c1vliA_ Probab=68.54   E-value=8.2  Score=18.07  Aligned_columns=125  Identities=14%

Q ss_pred             HHHHHHHHCCCCEEEE-----------------------CCCCCCCHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCC
Q ss_conf             9999999709998992-----------------------48999998999999998299389974233333566666679
Q batch____        19 ERFAAARKAGFDAVEF-----------------------LFPYNYSTLQIQKQLEQNHLTLALFNTAPGDINAGEWGLSA   75 (258)
Q Consensus        19 e~i~~a~~~Gf~~iEl-----------------------~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~   75 (258)
                      +.|+.|+++|.|+|-+                       +.....+..++.+.+++.|+...+--+.             
T Consensus        35 ~lI~~A~~aGadaVKFQt~~~~~~~~~~~~~~~~~~~~~~el~~e~~~~L~~~~~~~Gi~f~sTpfd-------------  101 (358)
T c1vliA_          35 ALIDAAAEAGADAVKFQXFQADRXYQKDPDVSIFSLVQSXEXPAEWILPLLDYCREKQVIFLSTVCD-------------  101 (358)
T ss_dssp             HHHHHHHHHTCSEEEECCBCGGGGTSCCCCCCHHHHGGGBSSCGGGHHHHHHHHHHTTCEEECBCCS-------------
T ss_pred             HHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHCCCEEEEEECC-------------
T ss_conf             9999999719978984201421001565563045777531699899999999999759829983479-------------


Q ss_pred             CHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCC
Q ss_conf             98999999999999999999818987884276767789838999999999999999999769879998278100488413
Q batch____        76 LPGREHEAHADIDLALEYALALNCEQVHVMAGVVPAGEDAERYRAVFIDNIRYAADRFAPHGKRILVEALSPGVKPHYLF  155 (258)
Q Consensus        76 ~~~~~~~~~~~~~~~i~~a~~lG~~~i~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~~gi~i~iE~~~~~~~~~~~~  155 (258)
                                  ..++++...+|++.+.+.++....               -.+.+..++.|..+.+=      ...+.+
T Consensus       102 ------------~~svd~l~~~~v~~~KIaS~el~n---------------~pLL~~~A~~gkPvilS------TGmatl  148 (358)
T c1vliA_         102 ------------EGSADLLQSTSPSAFKIASYEINH---------------LPLLKYVARLNRPXIFS------TAGAEI  148 (358)
T ss_dssp             ------------HHHHHHHHTTCCSCEEECGGGTTC---------------HHHHHHHHTTCSCEEEE------CTTCCH
T ss_pred             ------------HHHHHHHHHCCCCEEEECHHHCCC---------------HHHHHHHHHCCCCEEEE------CCCCCH
T ss_conf             ------------999999986399869984122798---------------89999996318971851------354688


Q ss_pred             CCHHHHHHHHHHHCCCCCCCCCCHHHHHHCCCCH
Q ss_conf             8999999999871854334203212433237632
Q batch____       156 SSQYQALAIVEEVARDNVFIQLDTFHAQKVDGNL  189 (258)
Q Consensus       156 ~~~~~~~~l~~~~~~~~~~~~~d~~h~~~~g~~~  189 (258)
                      ...+.+.+.+...+...+.+.-++..+....++.
T Consensus       149 ~Ei~~Av~~i~~~g~~~i~llhC~s~YP~p~~~~  182 (358)
T c1vliA_         149 SDVHEAWRTIRAEGNNQIAIXHCVAKYPAPPEYS  182 (358)
T ss_dssp             HHHHHHHHHHHTTTCCCEEEEEECSSSSCCGGGC
T ss_pred             HHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHC
T ss_conf             9999999999967998489995588889886673