15/01/2012 19:56:56 : INFO  : Run start: Sun Jan 15 19:56:55 GMT 2012
15/01/2012 19:57:01 : INFO  : Initialised job
15/01/2012 19:57:03 : INFO  : Renaming log file 'phyre2_20120115_195654.log' to '/bmm/www/servers/phyre2/public_html/phyre2_output/ef5fa66c279f0533/phyre_20120115_195654.log'
15/01/2012 19:57:04 : INFO  : Initialised job:
Sequence
>batch____
MNTISSLETTDLPAAYHIEQRAHAFPWSEKTFASNQGERYLNFQLTQNGKMAAFAITQVV
LDEATLFNIAVDPDYQRQGLGRALLEHLIDELEKRGVATLWLEVRASNAAAIALYESLGF
NEATIRRNYYPTTDGREDAIIMALPISM

15/01/2012 19:57:05 : INFO  : Checked sequence
15/01/2012 19:57:09 : INFO  : Finding homologues with PSI-BLAST
15/01/2012 19:57:10 : INFO  : PSI-BLAST 3 iterations
15/01/2012 19:58:40 : INFO  : PSI-BLAST 5 iterations
15/01/2012 20:00:59 : INFO  : Finished PSI-BLAST
15/01/2012 20:01:00 : INFO  : Running Buildali to generate a3m file
15/01/2012 20:50:57 : INFO  : Converting to HMM
15/01/2012 20:51:01 : INFO  : Calibrating HMM
15/01/2012 20:51:09 : INFO  : Searching HMM database
15/01/2012 20:54:52 : INFO  : Finished buildali
15/01/2012 20:54:57 : INFO  : Predicting secondary structure
15/01/2012 20:55:01 : INFO  : Predicted secondary structure (PSI-Pred)
15/01/2012 20:55:02 : INFO  : Predicting Disordered regions
15/01/2012 20:55:05 : INFO  : Predicted Disorder (Disopred)
15/01/2012 20:55:06 : INFO  : Running memsat_svm check
15/01/2012 20:58:08 : INFO  : Running memsat_svm full
15/01/2012 21:03:36 : INFO  : Predicted Transmembrane (memsat_svm) ID 'ef5fa66c279f0533'
15/01/2012 21:03:37 : INFO  : Initialising fold library search
15/01/2012 21:03:39 : INFO  : Initialised search input
15/01/2012 21:03:40 : INFO  : Building Ensemble models
15/01/2012 21:03:42 : INFO  : Building hh.c2cntD_.model.1.pdb
15/01/2012 21:03:52 : INFO  : Building c2cntD_.1.pdb
15/01/2012 21:04:00 : INFO  : Building c2pswA_.2.pdb
15/01/2012 21:04:10 : INFO  : Building d2ae6a1.3.pdb
15/01/2012 21:04:19 : INFO  : Building c3dr8B_.4.pdb
15/01/2012 21:04:28 : INFO  : Building d1yvoa1.5.pdb
15/01/2012 21:04:38 : INFO  : Building d1yr0a1.6.pdb
15/01/2012 21:04:47 : INFO  : Building c2r7hA_.7.pdb
15/01/2012 21:04:56 : INFO  : Building d1vhsa_.8.pdb
15/01/2012 21:05:04 : INFO  : Building c2x7bA_.9.pdb
15/01/2012 21:05:13 : INFO  : Building d1ghea_.10.pdb
15/01/2012 21:05:22 : INFO  : Building c3blnA_.11.pdb
15/01/2012 21:05:31 : INFO  : Building d2i6ca1.12.pdb
15/01/2012 21:05:41 : INFO  : Building d1mk4a_.13.pdb
15/01/2012 21:05:51 : INFO  : Building c3ld2B_.14.pdb
15/01/2012 21:06:00 : INFO  : Building c3g8wB_.15.pdb
15/01/2012 21:06:08 : INFO  : Building c2jlmE_.16.pdb
15/01/2012 21:06:17 : INFO  : Building c2reeB_.17.pdb
15/01/2012 21:06:26 : INFO  : Building d1tiqa_.18.pdb
15/01/2012 21:06:35 : INFO  : Building c3f8kA_.19.pdb
15/01/2012 21:06:44 : INFO  : Building d1n71a_.20.pdb
15/01/2012 21:07:05 : INFO  : Finished HH model building
15/01/2012 21:07:06 : WARN  : Set python to /bmm/www/servers/phyre2/bin//newpython/python2.6
15/01/2012 21:07:44 : INFO  : html domain output complete ID 'ef5fa66c279f0533'
15/01/2012 21:35:02 : INFO  : Run end  : Sun Jan 15 21:35:01 GMT 2012
