BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= batch____ (207 letters) Database: uniref50.fasta 3,077,464 sequences; 1,040,396,356 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value UniRef50_C4K4P2 ATP-dependent Clp protease proteolytic subunit n... 352 4e-96 UniRef50_A5W635 ATP-dependent Clp protease proteolytic subunit n... 332 4e-90 UniRef50_A8H614 ATP-dependent Clp protease proteolytic subunit n... 325 8e-88 UniRef50_A4JF05 ATP-dependent Clp protease proteolytic subunit n... 298 5e-80 UniRef50_Q1RJH2 ATP-dependent Clp protease proteolytic subunit n... 296 2e-79 UniRef50_A6Q675 ATP-dependent Clp protease proteolytic subunit n... 283 2e-75 UniRef50_Q2G3T3 ATP-dependent Clp protease proteolytic subunit n... 282 4e-75 UniRef50_Q11J60 ATP-dependent Clp protease proteolytic subunit 1... 277 2e-73 UniRef50_O34125 ATP-dependent Clp protease proteolytic subunit 2... 275 8e-73 UniRef50_C9KKA6 ATP-dependent Clp protease proteolytic subunit n... 274 1e-72 UniRef50_Q7UK66 ATP-dependent Clp protease proteolytic subunit 2... 274 1e-72 UniRef50_D0MF29 ATP-dependent Clp protease proteolytic subunit n... 268 7e-71 UniRef50_Q7V992 ATP-dependent Clp protease proteolytic subunit 1... 266 4e-70 UniRef50_Q2RZ59 ATP-dependent Clp protease proteolytic subunit 2... 257 1e-67 UniRef50_Q05FR8 ATP-dependent Clp protease proteolytic subunit n... 254 1e-66 UniRef50_Q8DJZ9 ATP-dependent Clp protease proteolytic subunit 2... 244 1e-63 UniRef50_D0WES0 ATP-dependent Clp protease proteolytic subunit n... 243 4e-63 UniRef50_Q1PW15 ATP-dependent Clp protease proteolytic subunit n... 240 2e-62 UniRef50_Q9S834 ATP-dependent Clp protease proteolytic subunit 5... 233 4e-60 UniRef50_Q2JHM1 ATP-dependent Clp protease proteolytic subunit 1... 232 6e-60 UniRef50_Q0CXE7 ATP-dependent Clp protease proteolytic subunit n... 230 2e-59 UniRef50_C1FDX2 ATP-dependent Clp protease proteolytic subunit n... 228 1e-58 UniRef50_C0M7M8 ATP-dependent Clp protease proteolytic subunit n... 227 1e-58 UniRef50_Q27539 ATP-dependent Clp protease proteolytic subunit, ... 223 4e-57 UniRef50_Q64NW2 ATP-dependent Clp protease proteolytic subunit n... 221 1e-56 UniRef50_A4RXD2 ATP-dependent Clp protease proteolytic subunit n... 213 3e-54 UniRef50_Q2J9A8 ATP-dependent Clp protease proteolytic subunit 4... 211 1e-53 UniRef50_A8RFM5 ATP-dependent Clp protease proteolytic subunit n... 209 3e-53 UniRef50_Q9SXJ6 ATP-dependent Clp protease proteolytic subunit 3... 207 1e-52 UniRef50_Q4JWV4 ATP-dependent Clp protease proteolytic subunit 1... 207 3e-52 UniRef50_Q7UK67 ATP-dependent Clp protease proteolytic subunit 1... 206 3e-52 UniRef50_Q47MU3 ATP-dependent Clp protease proteolytic subunit 1... 202 4e-51 UniRef50_Q82CA5 ATP-dependent Clp protease proteolytic subunit 4... 200 2e-50 UniRef50_Q94B60 ATP-dependent Clp protease proteolytic subunit 4... 199 4e-50 UniRef50_D1BZJ7 ATP-dependent Clp protease proteolytic subunit n... 194 2e-48 UniRef50_B8AMH6 ATP-dependent Clp protease proteolytic subunit n... 192 4e-48 UniRef50_A7ATV1 ATP-dependent Clp protease proteolytic subunit n... 190 2e-47 UniRef50_UPI00016C35C0 ATP-dependent Clp protease proteolytic su... 189 5e-47 UniRef50_Q36863 ATP-dependent Clp protease proteolytic subunit n... 189 6e-47 UniRef50_C9RRI3 ATP-dependent Clp protease proteolytic subunit n... 187 2e-46 UniRef50_C7QFY1 ATP-dependent Clp protease proteolytic subunit n... 181 2e-44 UniRef50_C4R657 ATP-dependent Clp protease proteolytic subunit n... 180 2e-44 UniRef50_C5C3N3 ATP-dependent Clp protease proteolytic subunit n... 180 3e-44 UniRef50_D2Q440 Endopeptidase Clp n=5 Tax=Actinomycetales RepID=... 179 6e-44 UniRef50_Q72R01 ATP-dependent Clp protease proteolytic subunit 2... 178 1e-43 UniRef50_UPI0000DB7F4F PREDICTED: similar to Putative ATP-depend... 177 2e-43 UniRef50_Q5Z0M4 ATP-dependent Clp protease proteolytic subunit 1... 177 2e-43 UniRef50_B1X4K7 ATP-dependent Clp protease proteolytic subunit n... 176 3e-43 UniRef50_Q7NEW1 ATP-dependent Clp protease proteolytic subunit 2... 176 5e-43 UniRef50_P56772 ATP-dependent Clp protease proteolytic subunit 1... 174 2e-42 UniRef50_Q06J25 ATP-dependent Clp protease proteolytic subunit n... 174 2e-42 UniRef50_Q3LWG6 ATP-dependent Clp protease proteolytic subunit n... 171 1e-41 UniRef50_Q9MUV8 ATP-dependent Clp protease proteolytic subunit n... 171 1e-41 UniRef50_Q2K5Q0 ATP-dependent Clp protease proteolytic subunit 3... 171 2e-41 UniRef50_UPI0001AF02E3 ATP-dependent Clp protease n=1 Tax=Strept... 170 3e-41 UniRef50_C1N254 ATP-dependent Clp protease proteolytic subunit n... 169 4e-41 UniRef50_D1NE80 ATP-dependent Clp protease proteolytic subunit (... 169 4e-41 UniRef50_Q1PYX1 ATP-dependent Clp protease proteolytic subunit n... 169 5e-41 UniRef50_A0LYF8 ATP-dependent Clp protease proteolytic subunit n... 168 1e-40 UniRef50_A4W647 ATP-dependent Clp protease proteolytic subunit n... 166 6e-40 UniRef50_Q8LB10 ATP-dependent Clp protease proteolytic subunit-r... 165 1e-39 UniRef50_B5A4F2 ATP-dependent Clp protease proteolytic subunit n... 164 2e-39 UniRef50_C7JE62 ATP-dependent Clp protease proteolytic subunit n... 161 2e-38 UniRef50_Q9SAA2 ATP-dependent Clp protease proteolytic subunit 6... 161 2e-38 UniRef50_Q73JM9 ATP-dependent Clp protease proteolytic subunit 2... 160 2e-38 UniRef50_C1E717 ATP-dependent Clp protease proteolytic subunit n... 160 3e-38 UniRef50_Q4UAC9 ATP-dependent Clp protease proteolytic subunit n... 160 3e-38 UniRef50_O97252 ATP-dependent Clp protease proteolytic subunit n... 159 5e-38 UniRef50_Q3AVC4 ATP-dependent Clp protease proteolytic subunit n... 157 2e-37 UniRef50_P36387 ATP-dependent Clp protease proteolytic subunit n... 157 2e-37 UniRef50_B3L4C3 ATP-dependent Clp protease proteolytic subunit n... 155 8e-37 UniRef50_B4WHH0 ATP-dependent Clp protease proteolytic subunit n... 155 1e-36 UniRef50_Q9L4P4 Putative ATP-dependent Clp protease proteolytic ... 153 3e-36 UniRef50_Q9XJ36 ATP-dependent Clp protease proteolytic subunit-r... 153 4e-36 UniRef50_C7Z253 ATP-dependent Clp protease proteolytic subunit n... 152 6e-36 UniRef50_Q8UD57 ATP-dependent Clp protease proteolytic subunit 3... 152 6e-36 UniRef50_B1X3L4 ATP-dependent Clp protease proteolytic subunit n... 150 2e-35 UniRef50_Q2VPX8 ATP-dependent Clp protease proteolytic subunit (... 150 2e-35 UniRef50_B9YN00 ATP-dependent Clp protease proteolytic subunit n... 150 3e-35 UniRef50_A7AQC7 ATP-dependent Clp protease proteolytic subunit n... 148 9e-35 UniRef50_Q3LW65 ATP-dependent Clp protease proteolytic subunit n... 147 3e-34 UniRef50_Q6C1Y5 ATP-dependent Clp protease proteolytic subunit n... 145 6e-34 UniRef50_Q6ME32 ATP-dependent Clp protease proteolytic subunit 1... 145 6e-34 UniRef50_P48254 Putative ATP-dependent Clp protease proteolytic ... 145 7e-34 UniRef50_O51698 ATP-dependent Clp protease proteolytic subunit 2... 145 1e-33 UniRef50_B9F8Z4 ATP-dependent Clp protease proteolytic subunit n... 145 1e-33 UniRef50_A6DMN5 ATP-dependent Clp protease proteolytic subunit n... 144 1e-33 UniRef50_Q872F9 ATP-dependent Clp protease proteolytic subunit n... 144 1e-33 UniRef50_UPI000196C506 hypothetical protein CATMIT_02666 n=1 Tax... 143 4e-33 UniRef50_A8IS47 ATP-dependent Clp protease proteolytic subunit n... 140 2e-32 UniRef50_B4WHH1 ATP-dependent Clp protease proteolytic subunit n... 140 3e-32 UniRef50_C7N490 ATP-dependent Clp protease proteolytic subunit n... 140 3e-32 UniRef50_B7FZS4 ATP-dependent Clp protease proteolytic subunit n... 140 4e-32 UniRef50_C5CQN7 ATP-dependent Clp protease proteolytic subunit n... 139 7e-32 UniRef50_D1Z6F0 ATP-dependent Clp protease proteolytic subunit n... 137 2e-31 UniRef50_B5A4F3 ATP-dependent Clp protease proteolytic subunit n... 137 2e-31 UniRef50_B3LBC6 ATP-dependent Clp protease proteolytic subunit n... 137 2e-31 UniRef50_B0LP85 ATP-dependent Clp protease proteolytic subunit n... 137 2e-31 UniRef50_D1BUV7 ATP-dependent Clp protease proteolytic subunit n... 137 2e-31 UniRef50_B0LP81 ATP-dependent Clp protease proteolytic subunit n... 137 3e-31 UniRef50_D0L7Q6 ATP-dependent Clp protease proteolytic subunit n... 137 3e-31 UniRef50_C1FE28 ATP-dependent Clp protease proteolytic subunit (... 136 4e-31 UniRef50_Q06FP3 ATP-dependent Clp protease proteolytic subunit n... 135 8e-31 UniRef50_Q06R14 ATP-dependent Clp protease proteolytic subunit n... 135 8e-31 UniRef50_Q01F73 ATP-dependent Clp protease proteolytic subunit (... 135 1e-30 UniRef50_C5XH66 ATP-dependent Clp protease proteolytic subunit n... 135 1e-30 UniRef50_A9I409 ATP-dependent Clp protease proteolytic subunit n... 134 2e-30 UniRef50_A8INX1 ATP-dependent Clp protease proteolytic subunit n... 133 4e-30 UniRef50_Q2WGG1 ATP-dependent Clp protease proteolytic subunit (... 133 4e-30 UniRef50_C8VJ02 ATP-dependent Clp protease proteolytic subunit n... 132 8e-30 UniRef50_Q50DZ1 ATP-dependent Clp protease proteolytic subunit n... 128 1e-28 UniRef50_Q5Z0M5 ATP-dependent Clp protease proteolytic subunit n... 127 2e-28 UniRef50_A5BHP1 ATP-dependent Clp protease proteolytic subunit n... 127 2e-28 UniRef50_Q9MTJ8 ATP-dependent Clp protease proteolytic subunit n... 127 3e-28 UniRef50_Q8L770 ATP-dependent Clp protease proteolytic subunit-r... 127 3e-28 UniRef50_Q06SH9 ATP-dependent Clp protease proteolytic subunit n... 125 7e-28 UniRef50_B2X1V4 ATP-dependent Clp protease proteolytic subunit n... 124 2e-27 UniRef50_Q2VPY9 ATP-dependent Clp protease proteolytic subunit (... 121 1e-26 UniRef50_B1X3L5 ATP-dependent Clp protease proteolytic subunit n... 117 2e-25 UniRef50_A4S2U0 ATP-dependent Clp protease proteolytic subunit n... 117 3e-25 UniRef50_Q9XJ35 ATP-dependent Clp protease proteolytic subunit-r... 114 1e-24 UniRef50_B0LNX5 ATP-dependent Clp protease proteolytic subunit n... 114 2e-24 UniRef50_B0LN89 ATP-dependent Clp protease proteolytic subunit n... 114 2e-24 UniRef50_Q011H7 ATP-dependent Clp protease proteolytic subunit n... 113 3e-24 UniRef50_A4RSQ9 ATP-dependent Clp protease proteolytic subunit n... 112 9e-24 UniRef50_B9HMY7 ATP-dependent Clp protease proteolytic subunit n... 110 2e-23 UniRef50_B0LP79 ATP-dependent Clp protease proteolytic subunit n... 110 3e-23 UniRef50_C9ZCK7 ATP-dependent Clp protease proteolytic subunit n... 109 5e-23 UniRef50_D1ZWV1 ATP-dependent Clp protease proteolytic subunit (... 109 7e-23 UniRef50_B7C8Y7 ATP-dependent Clp protease proteolytic subunit n... 108 1e-22 UniRef50_A4E7Q8 ATP-dependent Clp protease proteolytic subunit n... 107 2e-22 UniRef50_UPI000190C202 ATP-dependent Clp protease, proteolytic s... 106 5e-22 UniRef50_A8IXD6 ATP-dependent Clp protease proteolytic subunit n... 104 2e-21 UniRef50_B3Y5P7 ATP-dependent Clp protease proteolytic subunit (... 104 2e-21 UniRef50_C1FD32 ATP-dependent Clp protease proteolytic subunit n... 102 9e-21 UniRef50_B6G8S8 ATP-dependent Clp protease proteolytic subunit n... 101 1e-20 UniRef50_A1WEU3 ATP-dependent Clp protease proteolytic subunit n... 100 3e-20 UniRef50_P42380 ATP-dependent Clp protease proteolytic subunit n... 99 9e-20 UniRef50_A4S2Q5 ATP-dependent Clp protease proteolytic subunit n... 97 3e-19 UniRef50_B0LNM7 ATP-dependent Clp protease proteolytic subunit n... 96 8e-19 UniRef50_C6UN97 ATP-dependent Clp protease proteolytic subunit n... 95 1e-18 UniRef50_C5YWZ8 ATP-dependent Clp protease proteolytic subunit n... 95 2e-18 UniRef50_A8IH07 ATP-dependent Clp protease proteolytic subunit n... 95 2e-18 UniRef50_B7ZIH9 ATP-dependent Clp protease proteolytic subunit n... 94 2e-18 UniRef50_Q4UBQ0 ATP-dependent Clp protease proteolytic subunit n... 91 2e-17 UniRef50_B2KDB1 ATP-dependent Clp protease proteolytic subunit n... 91 3e-17 UniRef50_B2Y1Y4 ATP-dependent Clp protease proteolytic subunit n... 83 8e-15 UniRef50_Q5IX12 ATP-dependent Clp protease proteolytic subunit (... 80 4e-14 UniRef50_B6KPT2 ATP-dependent Clp protease proteolytic subunit n... 76 8e-13 UniRef50_Q40943 ATP-dependent Clp protease proteolytic subunit n... 74 3e-12 UniRef50_B3JP66 ATP-dependent Clp protease proteolytic subunit n... 73 8e-12 UniRef50_A3DG62 ATP-dependent Clp protease proteolytic subunit n... 69 1e-10 UniRef50_B6KHW4 ATP-dependent Clp protease proteolytic subunit n... 68 2e-10 UniRef50_Q3LW56 ATP-dependent Clp protease proteolytic subunit n... 68 2e-10 UniRef50_Q3Z7J8 ATP-dependent Clp protease proteolytic subunit n... 64 2e-09 UniRef50_C9L7D4 ATP-dependent Clp protease proteolytic subunit n... 64 2e-09 UniRef50_A0JQM5 ATP-dependent Clp protease proteolytic subunit n... 63 5e-09 UniRef50_A5F9J4 ATP-dependent Clp protease proteolytic subunit n... 63 5e-09 UniRef50_D2SD97 Peptidase S14 ClpP n=1 Tax=Geodermatophilus obsc... 63 7e-09 UniRef50_C5CJP6 ATP-dependent Clp protease proteolytic subunit n... 63 8e-09 UniRef50_A7FWE0 ATP-dependent Clp protease proteolytic subunit n... 63 8e-09 UniRef50_C3WMS7 ATP-dependent Clp protease proteolytic subunit n... 62 8e-09 UniRef50_C9DCR9 Gp103 n=5 Tax=unclassified Siphoviridae RepID=C9... 62 9e-09 UniRef50_A9C2D1 ATP-dependent Clp protease proteolytic subunit n... 62 1e-08 UniRef50_B3EUB4 Peptidase S14 ClpP n=1 Tax=Candidatus Amoebophil... 61 2e-08 UniRef50_B5YV95 ATP-dependent Clp protease proteolytic subunit n... 61 3e-08 UniRef50_B9CLK4 ATP-dependent Clp protease proteolytic subunit n... 61 3e-08 UniRef50_B1BPQ5 ATP-dependent Clp protease proteolytic subunit n... 61 3e-08 UniRef50_A1ZY45 ATP-dependent Clp protease proteolytic subunit n... 60 5e-08 UniRef50_D0DKS7 ATP-dependent Clp protease proteolytic subunit n... 60 5e-08 UniRef50_C1D8G7 ATP-dependent Clp protease proteolytic subunit n... 59 7e-08 UniRef50_Q65ES6 ATP-dependent Clp protease proteolytic subunit n... 59 8e-08 UniRef50_Q4A301 Putative ATP-dependent protease proteolytic subu... 59 9e-08 UniRef50_A8U7Z4 ATP-dependent Clp protease proteolytic subunit n... 59 1e-07 UniRef50_A3UVN6 ATP-dependent Clp protease proteolytic subunit n... 59 1e-07 UniRef50_A3DFX4 ATP-dependent Clp protease proteolytic subunit n... 58 2e-07 UniRef50_C6VLG0 ATP-dependent Clp protease proteolytic subunit n... 57 4e-07 UniRef50_A5KJS2 ATP-dependent Clp protease proteolytic subunit n... 57 4e-07 UniRef50_C4ML05 P05 n=1 Tax=Xanthomonas phage phiL7 RepID=C4ML05... 57 4e-07 UniRef50_Q3Z3P3 ATP-dependent Clp protease proteolytic subunit n... 57 4e-07 UniRef50_B5R8Q7 ATP-dependent Clp protease proteolytic subunit n... 57 4e-07 UniRef50_A5ZPL9 ATP-dependent Clp protease proteolytic subunit n... 56 6e-07 UniRef50_Q0S7S6 ATP-dependent Clp protease proteolytic subunit n... 56 7e-07 UniRef50_D2LX80 Peptidase S14 ClpP n=1 Tax=Bacillus cellulosilyt... 56 8e-07 UniRef50_P42379 Ceu clpP intein n=2 Tax=Chlamydomonas moewusii R... 56 8e-07 UniRef50_D2LST4 Peptidase S14 ClpP n=1 Tax=Bacillus cellulosilyt... 56 8e-07 UniRef50_B8DAG3 ATP-dependent Clp protease proteolytic subunit n... 56 8e-07 UniRef50_A6QII7 ATP-dependent Clp protease proteolytic subunit n... 56 9e-07 UniRef50_UPI0001B43327 serine protease n=1 Tax=Listeria monocyto... 56 9e-07 UniRef50_B0TCT9 ATP-dependent Clp protease proteolytic subunit n... 55 1e-06 UniRef50_UPI0001B44862 Clp protease domain protein n=3 Tax=Liste... 55 1e-06 UniRef50_A6N1Z7 Clp protease n=1 Tax=Microbacterium phage Min1 R... 55 1e-06 UniRef50_Q3LWK4 Clp protease n=1 Tax=Bigelowiella natans RepID=Q... 55 2e-06 UniRef50_B9PUD7 ATP-dependent Clp protease proteolytic subunit n... 55 2e-06 UniRef50_Q892G9 ATP-dependent Clp protease proteolytic subunit n... 55 2e-06 UniRef50_C4GAS5 ATP-dependent Clp protease proteolytic subunit n... 54 2e-06 UniRef50_C2KJ97 ATP-dependent Clp protease proteolytic subunit n... 54 3e-06 UniRef50_A3JIS6 ATP-dependent Clp protease proteolytic subunit n... 54 3e-06 UniRef50_B7QPY3 ATP-dependent Clp protease proteolytic subunit n... 54 3e-06 UniRef50_Q7P8G2 ATP-dependent Clp protease proteolytic subunit n... 54 3e-06 UniRef50_B0MY38 ATP-dependent Clp protease proteolytic subunit n... 54 3e-06 UniRef50_Q0AG16 ATP-dependent Clp protease proteolytic subunit n... 54 4e-06 UniRef50_Q2NPI5 ClpP family protein n=3 Tax=unclassified Siphovi... 54 4e-06 UniRef50_C2BG30 ATP-dependent Clp protease proteolytic subunit n... 54 4e-06 UniRef50_B8D1N4 ATP-dependent Clp protease proteolytic subunit n... 54 4e-06 UniRef50_Q3RAG5 ATP-dependent Clp protease proteolytic subunit n... 53 6e-06 UniRef50_Q041N2 ATP-dependent Clp protease proteolytic subunit n... 53 8e-06 UniRef50_C5R880 ATP-dependent Clp protease proteolytic subunit n... 52 8e-06 UniRef50_Q3EL78 ATP-dependent Clp protease proteolytic subunit n... 52 1e-05 UniRef50_A3F644 Head maturation protease n=3 Tax=root RepID=A3F6... 52 2e-05 UniRef50_C3WVP2 ATP-dependent Clp protease proteolytic subunit n... 52 2e-05 UniRef50_A8TF02 Peptidase S14 ClpP n=1 Tax=Methanococcus voltae ... 52 2e-05 UniRef50_UPI00017438C7 ATP-dependent Clp protease, proteolytic s... 51 2e-05 UniRef50_B8ILU4 ATP-dependent Clp protease proteolytic subunit n... 51 3e-05 UniRef50_B4D6M6 Peptidase S14 ClpP n=1 Tax=Chthoniobacter flavus... 50 3e-05 UniRef50_B2TQV1 ATP-dependent Clp protease proteolytic subunit n... 50 4e-05 UniRef50_Q01F40 Clp protease 2 proteolytic subunit (ISS) n=1 Tax... 50 4e-05 UniRef50_A7DYB1 Putative uncharacterized protein n=1 Tax=Strepto... 50 4e-05 UniRef50_A3X5R0 ATP-dependent Clp protease proteolytic subunit n... 50 4e-05 UniRef50_Q3LVU8 Clp protease n=1 Tax=Bigelowiella natans RepID=Q... 50 5e-05 UniRef50_B5A4F4 Chloroplast ATP-dependent Clp protease proteolyt... 50 6e-05 UniRef50_B7UZW7 ATP-dependent Clp protease proteolytic subunit n... 50 6e-05 UniRef50_Q72BY3 ClpP protease family protein n=2 Tax=Desulfovibr... 50 6e-05 UniRef50_C0A810 Peptidase S14 ClpP n=1 Tax=Opitutaceae bacterium... 50 7e-05 UniRef50_C7D0Z8 ATP-dependent Clp protease proteolytic subunit n... 50 7e-05 UniRef50_A8RU31 ATP-dependent Clp protease proteolytic subunit n... 49 7e-05 UniRef50_UPI0001B52F96 putative Clp protease n=1 Tax=Fusobacteri... 49 1e-04 UniRef50_B1RAB0 ATP-dependent Clp protease proteolytic subunit n... 49 1e-04 UniRef50_A2RFI0 ATP-dependent Clp protease proteolytic subunit n... 49 1e-04 UniRef50_A5C4G8 Putative uncharacterized protein (Fragment) n=1 ... 49 1e-04 UniRef50_A7GI71 ATP-dependent Clp protease proteolytic subunit n... 49 1e-04 UniRef50_B2V4L4 ATP-dependent Clp protease proteolytic subunit n... 49 2e-04 UniRef50_B9QT01 ATP-dependent Clp protease proteolytic subunit n... 48 2e-04 UniRef50_A1VPI3 ATP-dependent Clp protease proteolytic subunit n... 48 2e-04 UniRef50_B7HV38 ATP-dependent Clp protease proteolytic subunit n... 48 3e-04 UniRef50_B2V2A3 Peptidase S14, ClpP n=1 Tax=Clostridium botulinu... 47 3e-04 UniRef50_B1MZD0 ATP-dependent Clp protease proteolytic subunit n... 47 3e-04 UniRef50_A1VKV0 ATP-dependent Clp protease proteolytic subunit n... 47 4e-04 UniRef50_A7BZX9 Secreted protein n=2 Tax=Beggiatoa sp. PS RepID=... 47 4e-04 UniRef50_A8Z285 ATP-dependent Clp protease proteolytic subunit n... 47 4e-04 UniRef50_C6IMG9 ATP-dependent Clp protease proteolytic subunit n... 47 4e-04 UniRef50_Q1QKR7 ATP-dependent Clp protease proteolytic subunit n... 47 4e-04 UniRef50_UPI00017450C3 ATP-dependent Clp protease proteolytic su... 47 5e-04 UniRef50_A5V8D3 ATP-dependent Clp protease proteolytic subunit n... 47 5e-04 UniRef50_A4J7R2 ATP-dependent Clp protease proteolytic subunit n... 46 6e-04 UniRef50_Q854A3 Gp163 n=1 Tax=Mycobacterium phage Omega RepID=Q8... 46 6e-04 UniRef50_B7IY99 ATP-dependent Clp protease proteolytic subunit n... 46 6e-04 UniRef50_B9Z769 Peptidase S14 ClpP n=1 Tax=Lutiella nitroferrum ... 46 7e-04 UniRef50_A5ZRV6 ATP-dependent Clp protease proteolytic subunit n... 46 8e-04 UniRef50_UPI0001C37221 ATP-dependent Clp protease, proteolytic s... 46 0.001 >UniRef50_C4K4P2 ATP-dependent Clp protease proteolytic subunit n=300 Tax=cellular organisms RepID=CLPP_HAMD5 Length = 215 Score = 352 bits (904), Expect = 4e-96, Method: Compositional matrix adjust. Identities = 165/207 (79%), Positives = 186/207 (89%) Query: 1 MSYSGERDNFAPHMALVPMVIEQTSRGERSFDIYSRLLKERVIFLTGQVEDHMANLIVAQ 60 MS E++ P M LVPMV+EQTSRGER++DIYSR+LKERVIFLTGQVE+HMANLIVAQ Sbjct: 1 MSSFDEQNTRLPSMTLVPMVVEQTSRGERAYDIYSRMLKERVIFLTGQVEEHMANLIVAQ 60 Query: 61 MLFLEAENPEKDIYLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAG 120 MLFLEAENPEKDIYLYINSPGGVITAGMSIYDTMQFI PDVSTIC+GQA SMGAFLL AG Sbjct: 61 MLFLEAENPEKDIYLYINSPGGVITAGMSIYDTMQFITPDVSTICIGQACSMGAFLLAAG 120 Query: 121 AKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREILKVKGRMNELMALHTGQSLEQIER 180 AK KR+CLPN+RVMIHQPLGG+QGQA+DIEIHA+EILKVK RMN+LMA+HT ++L+ IE+ Sbjct: 121 AKSKRYCLPNARVMIHQPLGGFQGQASDIEIHAKEILKVKKRMNDLMAIHTKKTLKIIEK 180 Query: 181 DTERDRFLSAPEAVEYGLVDSILTHRN 207 DTERD FLSA EA +YGLVD +LT R Sbjct: 181 DTERDHFLSAEEAKKYGLVDCVLTERK 207 >UniRef50_A5W635 ATP-dependent Clp protease proteolytic subunit n=55 Tax=cellular organisms RepID=CLPP_PSEP1 Length = 213 Score = 332 bits (852), Expect = 4e-90, Method: Compositional matrix adjust. Identities = 155/205 (75%), Positives = 177/205 (86%) Query: 2 SYSGERDNFAPHMALVPMVIEQTSRGERSFDIYSRLLKERVIFLTGQVEDHMANLIVAQM 61 SY + + LVPMVIEQ++RGER++DIYSRLLKERVIFL G VED+MANL+VAQ+ Sbjct: 5 SYIQQSSDIQAAGGLVPMVIEQSARGERAYDIYSRLLKERVIFLVGPVEDYMANLVVAQL 64 Query: 62 LFLEAENPEKDIYLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGA 121 LFLEAENP+KDI+LYINSPGG +TAGMSIYDTMQFIKPDVSTIC+GQA SMGAFLL AGA Sbjct: 65 LFLEAENPDKDIHLYINSPGGSVTAGMSIYDTMQFIKPDVSTICIGQACSMGAFLLAAGA 124 Query: 122 KGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREILKVKGRMNELMALHTGQSLEQIERD 181 KGKR CLPNSRVMIHQPLGG+QGQATDIEIHA+EIL +K R+NEL+A HTGQ LE I+RD Sbjct: 125 KGKRHCLPNSRVMIHQPLGGFQGQATDIEIHAQEILNIKARLNELLAYHTGQDLETIKRD 184 Query: 182 TERDRFLSAPEAVEYGLVDSILTHR 206 TERD F+SA A EYGL+DS+ R Sbjct: 185 TERDNFMSASRAAEYGLIDSVYDKR 209 >UniRef50_A8H614 ATP-dependent Clp protease proteolytic subunit n=35 Tax=Bacteria RepID=CLPP_SHEPA Length = 203 Score = 325 bits (832), Expect = 8e-88, Method: Compositional matrix adjust. Identities = 148/192 (77%), Positives = 175/192 (91%) Query: 15 ALVPMVIEQTSRGERSFDIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIY 74 ALVPMV+EQT++GERS+DIYSRLLKERVIFL GQVE+HMANLIVAQ+LFLE+E+P+KDIY Sbjct: 11 ALVPMVVEQTAKGERSYDIYSRLLKERVIFLVGQVEEHMANLIVAQLLFLESESPDKDIY 70 Query: 75 LYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVM 134 LYINSPGG +TAGM+IYDTMQFIKP+VST+C+GQAASMGAFLL GA+GKR CLPNSRVM Sbjct: 71 LYINSPGGSVTAGMAIYDTMQFIKPNVSTVCIGQAASMGAFLLAGGAEGKRHCLPNSRVM 130 Query: 135 IHQPLGGYQGQATDIEIHAREILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEAV 194 IHQPLGG+QGQA+DI IHA+EIL +K ++N ++A HTGQ LE IERDT+RD F+SA EA Sbjct: 131 IHQPLGGFQGQASDIAIHAQEILGIKNKLNTMLAEHTGQPLEVIERDTDRDNFMSATEAA 190 Query: 195 EYGLVDSILTHR 206 EYGLVDS++ R Sbjct: 191 EYGLVDSVIAKR 202 >UniRef50_A4JF05 ATP-dependent Clp protease proteolytic subunit n=49 Tax=cellular organisms RepID=CLPP_BURVG Length = 217 Score = 298 bits (764), Expect = 5e-80, Method: Compositional matrix adjust. Identities = 136/196 (69%), Positives = 167/196 (85%) Query: 11 APHMALVPMVIEQTSRGERSFDIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPE 70 A + LVP+V+E + RGERS+DIYSRLLKER++F+ G+V D ANL+VAQ+LFLE+ENP+ Sbjct: 21 AQALGLVPIVVETSGRGERSYDIYSRLLKERLVFMVGEVNDQTANLVVAQLLFLESENPD 80 Query: 71 KDIYLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPN 130 KDI LYINSPGG ++AGM+IYDTMQFIKPDVST+CMG AASMGAFLL +GAKGKRF LPN Sbjct: 81 KDISLYINSPGGSVSAGMAIYDTMQFIKPDVSTLCMGLAASMGAFLLASGAKGKRFALPN 140 Query: 131 SRVMIHQPLGGYQGQATDIEIHAREILKVKGRMNELMALHTGQSLEQIERDTERDRFLSA 190 SRVMIHQPLGG +GQA+DIEI AREIL +K R+N L+A HTGQ +E+I RDT+RD F+S+ Sbjct: 141 SRVMIHQPLGGARGQASDIEIQAREILYLKERLNNLLAQHTGQDVERIARDTDRDNFMSS 200 Query: 191 PEAVEYGLVDSILTHR 206 +A YGL+D +L R Sbjct: 201 DDAKAYGLIDQVLLKR 216 >UniRef50_Q1RJH2 ATP-dependent Clp protease proteolytic subunit n=280 Tax=cellular organisms RepID=CLPP_RICBR Length = 227 Score = 296 bits (759), Expect = 2e-79, Method: Compositional matrix adjust. Identities = 132/194 (68%), Positives = 167/194 (86%) Query: 14 MALVPMVIEQTSRGERSFDIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDI 73 M+ VP+VIEQTSRGER++DIYSRLLKER+IF+ G +EDHMANLI AQ+LFLEAENPEKDI Sbjct: 23 MSYVPIVIEQTSRGERAYDIYSRLLKERIIFVCGPIEDHMANLITAQLLFLEAENPEKDI 82 Query: 74 YLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRV 133 Y+YINSPGGV+TAG++IYDTMQ+IKP V+T+C+GQA SMG+FLL G KG R+ LP+SRV Sbjct: 83 YMYINSPGGVVTAGLAIYDTMQYIKPKVATLCIGQACSMGSFLLCGGEKGMRYSLPHSRV 142 Query: 134 MIHQPLGGYQGQATDIEIHAREILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEA 193 MIHQP GGY+GQATDIEIHA+E LK+K +N L + HTGQ ++ +E+ ERD F+S EA Sbjct: 143 MIHQPSGGYRGQATDIEIHAQETLKIKKILNSLYSKHTGQDVKHVEKSMERDNFMSPEEA 202 Query: 194 VEYGLVDSILTHRN 207 ++G++D I+THR+ Sbjct: 203 KKFGIIDKIITHRD 216 >UniRef50_A6Q675 ATP-dependent Clp protease proteolytic subunit n=60 Tax=cellular organisms RepID=CLPP_SULNB Length = 195 Score = 283 bits (725), Expect = 2e-75, Method: Compositional matrix adjust. Identities = 125/192 (65%), Positives = 166/192 (86%) Query: 14 MALVPMVIEQTSRGERSFDIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDI 73 M+ +P V+EQT RGERS+DIYSRLLK+R+I L+G+V D +A+ IVAQ+LFLEA++P+KDI Sbjct: 1 MSYIPYVVEQTGRGERSYDIYSRLLKDRIIMLSGEVNDQVASSIVAQLLFLEAQDPDKDI 60 Query: 74 YLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRV 133 Y YINSPGGVIT+G+S++DTM +IKPD+ TIC+GQAASMGAFLL +G KGKR+ LP++R+ Sbjct: 61 YFYINSPGGVITSGLSMFDTMNYIKPDIVTICIGQAASMGAFLLASGTKGKRYALPHARI 120 Query: 134 MIHQPLGGYQGQATDIEIHAREILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEA 193 MIHQP GG QGQ+TDI+I A+EI ++K +NE+MA TG++ ++IE+DTERD F+SA EA Sbjct: 121 MIHQPSGGAQGQSTDIQIQAQEIQRLKDTLNEIMAEKTGKTAKRIEKDTERDNFMSAKEA 180 Query: 194 VEYGLVDSILTH 205 VEYGL+D +LT Sbjct: 181 VEYGLIDKVLTK 192 >UniRef50_Q2G3T3 ATP-dependent Clp protease proteolytic subunit n=127 Tax=root RepID=CLPP_NOVAD Length = 235 Score = 282 bits (722), Expect = 4e-75, Method: Compositional matrix adjust. Identities = 126/192 (65%), Positives = 165/192 (85%) Query: 15 ALVPMVIEQTSRGERSFDIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIY 74 AL+P+V+EQ+SRGERSFDIYSRLL+ER+IF+TG+VEDHMA++I+AQ+LFLE+ENP KDI Sbjct: 27 ALIPVVVEQSSRGERSFDIYSRLLRERIIFVTGEVEDHMASVIIAQLLFLESENPSKDIS 86 Query: 75 LYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVM 134 +YINSPGGV+TAG++IYDTMQ+I+P VST+C+GQAASMG+FLL AG G R LPN+R+M Sbjct: 87 MYINSPGGVVTAGLAIYDTMQYIRPRVSTVCIGQAASMGSFLLAAGEPGMRIALPNARIM 146 Query: 135 IHQPLGGYQGQATDIEIHAREILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEAV 194 IHQP GG +G A+DIEI AREIL+++ RMN+L TG+SL++IE+ +RD FL A EA+ Sbjct: 147 IHQPSGGARGMASDIEIQAREILRIRKRMNDLYVKFTGRSLDEIEKAMDRDTFLEAEEAM 206 Query: 195 EYGLVDSILTHR 206 ++GLVD + R Sbjct: 207 KFGLVDKVFESR 218 >UniRef50_Q11J60 ATP-dependent Clp protease proteolytic subunit 1 n=24 Tax=cellular organisms RepID=CLPP1_MESSB Length = 210 Score = 277 bits (709), Expect = 2e-73, Method: Compositional matrix adjust. Identities = 126/193 (65%), Positives = 162/193 (83%) Query: 14 MALVPMVIEQTSRGERSFDIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDI 73 M LVPMV+EQT+RGER++DI+SRLLKER+IF+TG VED MA L+ AQ+LFLEAENP+K+I Sbjct: 9 MNLVPMVVEQTNRGERAYDIFSRLLKERIIFITGPVEDGMATLVCAQLLFLEAENPKKEI 68 Query: 74 YLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRV 133 LYINSPGGV+T+GM+IYDTMQFI+P VST+C+GQAASMG+ LL AG K RF PN+RV Sbjct: 69 ALYINSPGGVVTSGMAIYDTMQFIQPPVSTLCIGQAASMGSLLLCAGHKDMRFATPNARV 128 Query: 134 MIHQPLGGYQGQATDIEIHAREILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEA 193 M+HQP GG+QGQA+DIE HA++I+K+K R+NE+ HTGQ + IER +RD F++A EA Sbjct: 129 MVHQPSGGFQGQASDIERHAQDIIKLKRRLNEIYVKHTGQDYDTIERTLDRDHFMTADEA 188 Query: 194 VEYGLVDSILTHR 206 +GLVD +++ R Sbjct: 189 QAFGLVDRVISER 201 >UniRef50_O34125 ATP-dependent Clp protease proteolytic subunit 2 n=151 Tax=cellular organisms RepID=CLPP2_SYNE7 Length = 240 Score = 275 bits (702), Expect = 8e-73, Method: Compositional matrix adjust. Identities = 130/195 (66%), Positives = 159/195 (81%) Query: 10 FAPHMALVPMVIEQTSRGERSFDIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENP 69 A A+VP V+EQ+ RGER+FDIYSRLL+ER++FL V+D +A+ IVAQ+LFLEAE+P Sbjct: 31 IAGSQAIVPTVVEQSGRGERAFDIYSRLLRERIVFLGTGVDDAVADSIVAQLLFLEAEDP 90 Query: 70 EKDIYLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLP 129 EKDI LYINSPGG +TAGM+IYDTMQ + PDV+TIC G AASMGAFLL+ GA+GKR LP Sbjct: 91 EKDIQLYINSPGGSVTAGMAIYDTMQQVAPDVATICFGLAASMGAFLLSGGAQGKRMALP 150 Query: 130 NSRVMIHQPLGGYQGQATDIEIHAREILKVKGRMNELMALHTGQSLEQIERDTERDRFLS 189 ++R+MIHQPLGG QGQA DIEI AREIL K +N+L+A HTGQ LE+IE DT+RD F+S Sbjct: 151 SARIMIHQPLGGAQGQAVDIEIQAREILYHKSTLNDLLAQHTGQPLEKIEVDTDRDFFMS 210 Query: 190 APEAVEYGLVDSILT 204 EA YGL+D +LT Sbjct: 211 PEEAKAYGLIDQVLT 225 >UniRef50_C9KKA6 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Mitsuokella multacida DSM 20544 RepID=C9KKA6_9FIRM Length = 199 Score = 274 bits (701), Expect = 1e-72, Method: Compositional matrix adjust. Identities = 121/187 (64%), Positives = 162/187 (86%) Query: 19 MVIEQTSRGERSFDIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYIN 78 MV+E+++ GER++DIYSRLLK+R+IFL G ++D +AN +VAQ+LFLE+E+P+KDI+LYIN Sbjct: 1 MVVERSNTGERAYDIYSRLLKDRIIFLGGPIDDAVANTVVAQLLFLESEDPDKDIHLYIN 60 Query: 79 SPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQP 138 SPGGV+TAG++IYDTMQ+IKPDVSTIC+GQAASMGA LLTAGAKGKR+ LPN+R+MIHQP Sbjct: 61 SPGGVVTAGLAIYDTMQYIKPDVSTICIGQAASMGALLLTAGAKGKRYALPNARIMIHQP 120 Query: 139 LGGYQGQATDIEIHAREILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEAVEYGL 198 LGG QGQ+TDI+I AREI +++ +N+++ TG+ E + +DTERD F++A EA YGL Sbjct: 121 LGGAQGQSTDIQIQAREIQRIREVINDILVESTGKDRETVVQDTERDNFMTAEEAKAYGL 180 Query: 199 VDSILTH 205 VD ++T Sbjct: 181 VDEVITR 187 >UniRef50_Q7UK66 ATP-dependent Clp protease proteolytic subunit 2 n=27 Tax=cellular organisms RepID=CLPP2_RHOBA Length = 195 Score = 274 bits (700), Expect = 1e-72, Method: Compositional matrix adjust. Identities = 123/190 (64%), Positives = 158/190 (83%) Query: 14 MALVPMVIEQTSRGERSFDIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDI 73 M ++P V+E R ER++DIYSRLLK+R+IFL QV+D ++N +VAQMLFL+A++P+KDI Sbjct: 1 MPVIPYVVESNGREERTYDIYSRLLKDRIIFLGQQVDDQISNALVAQMLFLQADDPKKDI 60 Query: 74 YLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRV 133 ++YINSPGG ITAGM+IYDTMQF+ DV+T C+GQAASMGA LLTAGAKGKRF LPN+R+ Sbjct: 61 HMYINSPGGSITAGMAIYDTMQFVSCDVATYCIGQAASMGAVLLTAGAKGKRFALPNARI 120 Query: 134 MIHQPLGGYQGQATDIEIHAREILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEA 193 MIHQPL G QG A ++EIH E+ ++K RMNE+M HTG SLE+IE DT+RDRF+SA EA Sbjct: 121 MIHQPLAGMQGTAREVEIHVAELRRIKQRMNEIMIEHTGHSLEKIEEDTDRDRFMSADEA 180 Query: 194 VEYGLVDSIL 203 YGL+D ++ Sbjct: 181 CSYGLIDKVV 190 >UniRef50_D0MF29 ATP-dependent Clp protease proteolytic subunit n=3 Tax=Bacteria RepID=D0MF29_RHOM4 Length = 252 Score = 268 bits (686), Expect = 7e-71, Method: Compositional matrix adjust. Identities = 127/205 (61%), Positives = 166/205 (80%), Gaps = 2/205 (0%) Query: 3 YSGERDNFAPHMALVPMVIEQTSRGERSFDIYSRLLKERVIFLTGQVEDHMANLIVAQML 62 YSG + P ALVP+VIEQT+RGER++DI+SRLLKER++ + + D +ANL+VAQ+L Sbjct: 24 YSGPFQQY-PVGALVPIVIEQTTRGERAYDIFSRLLKERIVIIGTPINDQIANLVVAQLL 82 Query: 63 FLEAENPEKDIYLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAK 122 +L +E+ E+DI +YINSPGG I +G+++YDTMQ++ P V+TIC+G AASMGA LL AG K Sbjct: 83 WLASEDSERDINIYINSPGGSIDSGLAVYDTMQYVAPPVATICVGLAASMGAVLLAAGVK 142 Query: 123 GKRFCLPNSRVMIHQP-LGGYQGQATDIEIHAREILKVKGRMNELMALHTGQSLEQIERD 181 GKR LPNSR+MIHQP + G QGQATDIEIHAREILK++ R+NE++A HTGQ E+I +D Sbjct: 143 GKRAALPNSRIMIHQPWMSGVQGQATDIEIHAREILKMRERLNEILAYHTGQPKERIAQD 202 Query: 182 TERDRFLSAPEAVEYGLVDSILTHR 206 +RD +LSA EA EYGLVD++LT R Sbjct: 203 VDRDFWLSAQEAKEYGLVDNVLTPR 227 >UniRef50_Q7V992 ATP-dependent Clp protease proteolytic subunit 1 n=12 Tax=Bacteria RepID=CLPP1_PROMM Length = 224 Score = 266 bits (679), Expect = 4e-70, Method: Compositional matrix adjust. Identities = 127/201 (63%), Positives = 158/201 (78%), Gaps = 2/201 (0%) Query: 3 YSGERDNFAPHMALVPMVIEQTSRGERSFDIYSRLLKERVIFLTGQVEDHMANLIVAQML 62 + G R +P ++P V+EQ+ RGER+FDIYSRLL+ER+IFL V+D +A+ +VAQML Sbjct: 14 WQGIRPVSSP--GILPTVVEQSGRGERAFDIYSRLLRERIIFLGTGVDDQVADALVAQML 71 Query: 63 FLEAENPEKDIYLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAK 122 FLEAE+PEKDI +YINSPGG +TAG++IYDTMQ + PDV TIC G AASMGAFLL G K Sbjct: 72 FLEAEDPEKDIQIYINSPGGSVTAGLAIYDTMQQVAPDVVTICYGLAASMGAFLLCGGTK 131 Query: 123 GKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREILKVKGRMNELMALHTGQSLEQIERDT 182 GKR LPN+R+MIHQPLGG QGQA DIEI A+EIL +K +N L+A HTGQ L +I DT Sbjct: 132 GKRLALPNARIMIHQPLGGAQGQAVDIEIQAKEILFLKETLNGLLAEHTGQPLNKIAEDT 191 Query: 183 ERDRFLSAPEAVEYGLVDSIL 203 +RD FLS +AVEYGL+D ++ Sbjct: 192 DRDHFLSPAKAVEYGLIDRVV 212 >UniRef50_Q2RZ59 ATP-dependent Clp protease proteolytic subunit 2 n=82 Tax=Bacteria RepID=CLPP2_SALRD Length = 233 Score = 257 bits (657), Expect = 1e-67, Method: Compositional matrix adjust. Identities = 119/196 (60%), Positives = 155/196 (79%) Query: 12 PHMALVPMVIEQTSRGERSFDIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEK 71 P LVPMV+EQT+RGER++DI+SRLLKER++F+ + D +ANL VAQ+L+L +E+ EK Sbjct: 17 PMSGLVPMVVEQTTRGERAYDIFSRLLKERIVFIGTPINDQIANLTVAQLLYLASESSEK 76 Query: 72 DIYLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNS 131 I LYINSPGGVI +G+ +YDTMQ+I VSTIC+G AASMG+ LL AG R CLPNS Sbjct: 77 PINLYINSPGGVIYSGLGVYDTMQYIGAPVSTICVGLAASMGSVLLAAGEDDSRACLPNS 136 Query: 132 RVMIHQPLGGYQGQATDIEIHAREILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAP 191 RVMIHQP+GG +GQA+DIEI A EI+ +K R+ E++ALHTGQ ++QIE D +R+ ++SA Sbjct: 137 RVMIHQPMGGAEGQASDIEIQAEEIMWLKERLYEILALHTGQDIDQIEADADRNYWMSAE 196 Query: 192 EAVEYGLVDSILTHRN 207 EA EYGLVD++L N Sbjct: 197 EAEEYGLVDNVLNPDN 212 >UniRef50_Q05FR8 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Candidatus Carsonella ruddii PV RepID=CLPP_CARRP Length = 194 Score = 254 bits (650), Expect = 1e-66, Method: Compositional matrix adjust. Identities = 111/193 (57%), Positives = 157/193 (81%), Gaps = 1/193 (0%) Query: 14 MALVPMVIEQTSRGERSFDIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDI 73 M +P VI++ +G+R D+YS++LKERVI+L G +ED MA+LIV+Q++FL++EN KDI Sbjct: 1 MIFLPTVIDKNIKGDRFLDLYSKMLKERVIYLNGAIEDTMASLIVSQLMFLDSEN-SKDI 59 Query: 74 YLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRV 133 LYINSPGGV+++G+SIYDT+QF+K DVSTIC+GQAASM A LL AG KGKRFC PNSR+ Sbjct: 60 ILYINSPGGVVSSGLSIYDTIQFLKSDVSTICIGQAASMAAVLLAAGKKGKRFCFPNSRI 119 Query: 134 MIHQPLGGYQGQATDIEIHAREILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEA 193 MIHQPLG QGQA+D+EIHARE++ +K + E+++ HT S+ QI +DT+RD F++ + Sbjct: 120 MIHQPLGYAQGQASDVEIHAREMINIKQILCEILSSHTNNSIFQIFKDTDRDNFMNCKQT 179 Query: 194 VEYGLVDSILTHR 206 ++YG++D++L + Sbjct: 180 LKYGIIDNVLYKK 192 >UniRef50_Q8DJZ9 ATP-dependent Clp protease proteolytic subunit 2 n=20 Tax=cellular organisms RepID=CLPP2_THEEB Length = 198 Score = 244 bits (623), Expect = 1e-63, Method: Compositional matrix adjust. Identities = 116/177 (65%), Positives = 144/177 (81%) Query: 31 FDIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSI 90 DIY+RL +ER+IFL +V+D +AN IVA ML+L++E+P KDI LYINSPGG +TAGM+I Sbjct: 21 IDIYNRLYRERIIFLGKEVDDEIANQIVAVMLYLDSEDPGKDIMLYINSPGGSVTAGMAI 80 Query: 91 YDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIE 150 YDTMQ IK DV TIC+G AASMG+FLL AG KGKR LP+SR+MIHQP GG +GQATDIE Sbjct: 81 YDTMQHIKSDVVTICVGLAASMGSFLLAAGTKGKRLALPHSRIMIHQPSGGTRGQATDIE 140 Query: 151 IHAREILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEAVEYGLVDSILTHRN 207 I AREIL+V+ ++NEL A HTGQ LE+IERD +RD F+SA EA YGL+D ++ R+ Sbjct: 141 IEAREILRVRRQLNELYAYHTGQPLEKIERDMDRDFFMSAEEAKNYGLIDRVIEERS 197 >UniRef50_D0WES0 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Slackia exigua ATCC 700122 RepID=D0WES0_9ACTN Length = 255 Score = 243 bits (619), Expect = 4e-63, Method: Compositional matrix adjust. Identities = 111/192 (57%), Positives = 149/192 (77%), Gaps = 2/192 (1%) Query: 17 VPMVIEQTSRGERSFDIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLY 76 +P VIEQ+ RGERS+DIYSRLL +R++FL ++D +AN++VAQ+L LE+ +PEKDI LY Sbjct: 57 IPYVIEQSPRGERSYDIYSRLLNDRIVFLGDAIDDGVANIVVAQLLHLESSDPEKDISLY 116 Query: 77 INSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIH 136 INSPGG ++AG++IYD MQFI+ DVST+C+G AASM + L AGA GKRF PNS++MIH Sbjct: 117 INSPGGSVSAGLAIYDAMQFIRCDVSTVCLGMAASMASVLTAAGAPGKRFVTPNSQIMIH 176 Query: 137 QPLGGY--QGQATDIEIHAREILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEAV 194 QP+GG + Q TD +I A E+ K + R+ L+A HTG+++EQI D+ERD +L+A EA Sbjct: 177 QPMGGSGERTQQTDFDILANEMRKTRDRLEGLLATHTGKTVEQIHADSERDHWLTAEEAK 236 Query: 195 EYGLVDSILTHR 206 YGLVD I+T R Sbjct: 237 AYGLVDDIITSR 248 >UniRef50_Q1PW15 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1PW15_9BACT Length = 224 Score = 240 bits (612), Expect = 2e-62, Method: Compositional matrix adjust. Identities = 110/204 (53%), Positives = 152/204 (74%), Gaps = 4/204 (1%) Query: 4 SGERDNFAPHMA----LVPMVIEQTSRGERSFDIYSRLLKERVIFLTGQVEDHMANLIVA 59 +G + +P M VP V+E+T GER +DI+SRLLK+R+IF+ +ED + NL++A Sbjct: 11 NGAFPDVSPQMKQGALFVPYVVEKTGHGERHYDIFSRLLKDRIIFIGSAIEDTLTNLVIA 70 Query: 60 QMLFLEAENPEKDIYLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTA 119 Q+LFL+ EN +DI +YINSPGG ITAG++IYDTMQF++ DV+T C+GQA SM A LL Sbjct: 71 QILFLQNENKNQDINIYINSPGGSITAGLAIYDTMQFVQCDVATFCIGQAYSMAAILLAG 130 Query: 120 GAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREILKVKGRMNELMALHTGQSLEQIE 179 G K KRF LP++R+M+HQP GG +G ATDI I A EILK+K +NE++ HTGQ LE+IE Sbjct: 131 GTKNKRFGLPHTRIMLHQPWGGMRGTATDISIQAEEILKMKKCLNEILVKHTGQPLERIE 190 Query: 180 RDTERDRFLSAPEAVEYGLVDSIL 203 D +RD ++S+ +A EYGL+D ++ Sbjct: 191 ADVDRDFYMSSHDAKEYGLIDEVI 214 >UniRef50_Q9S834 ATP-dependent Clp protease proteolytic subunit 5, chloroplastic n=29 Tax=cellular organisms RepID=CLPP5_ARATH Length = 298 Score = 233 bits (593), Expect = 4e-60, Method: Compositional matrix adjust. Identities = 108/176 (61%), Positives = 140/176 (79%) Query: 28 ERSFDIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAG 87 ER I S+L + R+I G V+D MAN+IVAQ+L+L+A +P KDI +Y+NSPGG +TAG Sbjct: 110 ERFQSIISQLFQYRIIRCGGAVDDDMANIIVAQLLYLDAVDPTKDIVMYVNSPGGSVTAG 169 Query: 88 MSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQAT 147 M+I+DTM+ I+PDVST+C+G AASMGAFLL+AG KGKR+ LPNSR+MIHQPLGG QG T Sbjct: 170 MAIFDTMRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQT 229 Query: 148 DIEIHAREILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEAVEYGLVDSIL 203 DI+I A E+L K +N +A HTGQSLE+I +DT+RD F+SA EA EYGL+D ++ Sbjct: 230 DIDIQANEMLHHKANLNGYLAYHTGQSLEKINQDTDRDFFMSAKEAKEYGLIDGVI 285 >UniRef50_Q2JHM1 ATP-dependent Clp protease proteolytic subunit 1 n=133 Tax=cellular organisms RepID=CLPP1_SYNJB Length = 203 Score = 232 bits (591), Expect = 6e-60, Method: Compositional matrix adjust. Identities = 108/173 (62%), Positives = 139/173 (80%), Gaps = 1/173 (0%) Query: 36 RLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIYDTMQ 95 RL +ER++F+ ++D +AN IV ML+L +++P+KDI +YINSPGG +TAGM+IYDTM Sbjct: 26 RLYQERILFIGEPIDDSLANTIVGVMLYLNSQDPQKDIVMYINSPGGSVTAGMAIYDTMN 85 Query: 96 FIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQP-LGGYQGQATDIEIHAR 154 IKPD+ T+C+GQAASMGAFLL AG KGKRF LP+SR+M+HQP LG QGQA+DIEI AR Sbjct: 86 HIKPDIVTVCVGQAASMGAFLLAAGTKGKRFALPHSRIMLHQPSLGTIQGQASDIEIRAR 145 Query: 155 EILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEAVEYGLVDSILTHRN 207 E L+VK RMNE++A TGQ LE+IERD ERD +LSA EA YG+VD ++ R+ Sbjct: 146 ETLRVKRRMNEILAQTTGQPLEKIERDVERDFYLSATEAQAYGIVDRVIQERS 198 >UniRef50_Q0CXE7 ATP-dependent Clp protease proteolytic subunit n=15 Tax=Dikarya RepID=Q0CXE7_ASPTN Length = 258 Score = 230 bits (586), Expect = 2e-59, Method: Compositional matrix adjust. Identities = 113/204 (55%), Positives = 152/204 (74%), Gaps = 6/204 (2%) Query: 9 NFAPHMALVP--MVIEQTSRGERSFDIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEA 66 N +P A P V E G ++DI+SRLLKER+I L G+V++ M+ IVAQ+LFLEA Sbjct: 38 NTSPPRAWTPTPFVTETVGGGWHTYDIFSRLLKERIICLNGEVDETMSASIVAQLLFLEA 97 Query: 67 ENPEKDIYLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRF 126 +NP+K I+LYINSPGG +TAG++IYDTM +I VSTIC+GQAASMG+ LL G GKR+ Sbjct: 98 DNPQKPIHLYINSPGGSVTAGLAIYDTMTYIASPVSTICVGQAASMGSLLLCGGHPGKRY 157 Query: 127 CLPNSRVMIHQPLGGYQGQATDIEIHAREILKVKGRMNELMALH-TGQ---SLEQIERDT 182 CLP+S +M+HQP GGY GQA+DI IHA+EIL+V+ ++N++ H TG+ SLE+IE+ Sbjct: 158 CLPHSSIMMHQPSGGYFGQASDIAIHAKEILRVREQLNKIYKRHLTGKKEMSLEEIEKLM 217 Query: 183 ERDRFLSAPEAVEYGLVDSILTHR 206 ERD F+ A EA++ G+VD +L R Sbjct: 218 ERDYFMGAKEALDMGIVDEVLDRR 241 >UniRef50_C1FDX2 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Micromonas sp. RCC299 RepID=C1FDX2_9CHLO Length = 272 Score = 228 bits (580), Expect = 1e-58, Method: Compositional matrix adjust. Identities = 106/192 (55%), Positives = 146/192 (76%), Gaps = 6/192 (3%) Query: 20 VIEQTSRG------ERSFDIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDI 73 ++ Q S+G ER + S+L+ +R+I L G V+D NLIVAQ+L+L+A +P+KDI Sbjct: 63 IVAQQSKGPSPIVMERFQGVASQLMNQRIIRLGGAVDDDSCNLIVAQLLWLDATDPKKDI 122 Query: 74 YLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRV 133 LY+NSPGG +TAGM+++DTM+ ++PD+ST+C+G AASMGAFLL +G +GKRF LPNSR+ Sbjct: 123 TLYVNSPGGSVTAGMAVFDTMRHVRPDISTVCVGLAASMGAFLLASGQQGKRFSLPNSRI 182 Query: 134 MIHQPLGGYQGQATDIEIHAREILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEA 193 MIHQPLGG QGQA DIEI A EI+ K +N +A TG+ L+ + +DT+RD F+SA EA Sbjct: 183 MIHQPLGGAQGQAADIEIQANEIMHHKSTLNGYLAEFTGKPLDTVMQDTDRDFFMSAFEA 242 Query: 194 VEYGLVDSILTH 205 EYGL+DS++ H Sbjct: 243 KEYGLIDSVIEH 254 >UniRef50_C0M7M8 ATP-dependent Clp protease proteolytic subunit n=38 Tax=Bacteria RepID=CLPP_STRE4 Length = 196 Score = 227 bits (579), Expect = 1e-58, Method: Compositional matrix adjust. Identities = 106/190 (55%), Positives = 148/190 (77%), Gaps = 2/190 (1%) Query: 16 LVPMVIEQTSRGERSFDIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYL 75 ++P+VIEQTSRGERS+DIYSRLLK+R+I LTG VED+MAN ++AQ+LFL+A++ KDIYL Sbjct: 1 MIPVVIEQTSRGERSYDIYSRLLKDRIIMLTGPVEDNMANSVIAQLLFLDAQDNTKDIYL 60 Query: 76 YINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMI 135 Y+N+PGG ++AG++I DTM FIK DV TI MG AASMG + ++GAKGKRF LPN+ MI Sbjct: 61 YVNTPGGSVSAGLAIVDTMNFIKADVQTIVMGMAASMGTVIASSGAKGKRFMLPNAEYMI 120 Query: 136 HQPL--GGYQGQATDIEIHAREILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEA 193 HQP+ G Q TD+ I A +LK + R+ +++A + G++++QI +D ERD ++SA E Sbjct: 121 HQPMGGTGGGTQQTDMAIAAEHLLKTRHRLEKILAQNAGKTIKQIHKDAERDYWMSAEET 180 Query: 194 VEYGLVDSIL 203 + YG +D I+ Sbjct: 181 LAYGFIDEIM 190 >UniRef50_Q27539 ATP-dependent Clp protease proteolytic subunit, mitochondrial n=788 Tax=cellular organisms RepID=CLPP_CAEEL Length = 221 Score = 223 bits (567), Expect = 4e-57, Method: Compositional matrix adjust. Identities = 102/189 (53%), Positives = 145/189 (76%) Query: 17 VPMVIEQTSRGERSFDIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLY 76 +P VI+ +GER++DIYSRLL++R++ L V+D +A+ ++AQ+LFL++E+ +K I++Y Sbjct: 26 IPFVIDNEGKGERTYDIYSRLLRDRIVCLMTPVDDFIASALIAQLLFLQSESGKKPIHMY 85 Query: 77 INSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIH 136 INSPGG +TAG++IYDT+Q I VST +GQA+SMG+ LL AG KG R LPNSR+M+H Sbjct: 86 INSPGGSVTAGLAIYDTIQMISAPVSTWVIGQASSMGSLLLCAGEKGMRSALPNSRIMVH 145 Query: 137 QPLGGYQGQATDIEIHAREILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEAVEY 196 QP GG QG +DI I A EI ++K R+NE+ HTG S ++IE+ +RDRF+SA EA+++ Sbjct: 146 QPSGGAQGTCSDIVIRAEEITRLKRRLNEIYVHHTGMSYDEIEKTLDRDRFMSAHEALKF 205 Query: 197 GLVDSILTH 205 GLVD I TH Sbjct: 206 GLVDQIETH 214 >UniRef50_Q64NW2 ATP-dependent Clp protease proteolytic subunit n=73 Tax=cellular organisms RepID=CLPP_BACFR Length = 220 Score = 221 bits (563), Expect = 1e-56, Method: Compositional matrix adjust. Identities = 100/191 (52%), Positives = 142/191 (74%) Query: 16 LVPMVIEQTSRGERSFDIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYL 75 L P ++E+ D++SRL+ +R+IFL Q++D+ AN + AQ+L+L++ +P KDI + Sbjct: 30 LNPYILEERQLNVTQLDVFSRLMMDRIIFLGTQIDDYTANTLQAQLLYLDSVDPGKDISI 89 Query: 76 YINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMI 135 YINSPGG + AG+ IYDTMQFI DV+TIC G AASM + LL AGAKGKR LP+SRVMI Sbjct: 90 YINSPGGSVYAGLGIYDTMQFISSDVATICTGMAASMASVLLVAGAKGKRSALPHSRVMI 149 Query: 136 HQPLGGYQGQATDIEIHAREILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEAVE 195 HQP+GG QGQA+DIEI AREI K+K + ++A H+G S +++ D++RD +++A EA E Sbjct: 150 HQPMGGAQGQASDIEITAREIQKLKKELYTIIADHSGTSFDKVWADSDRDYWMTAQEAKE 209 Query: 196 YGLVDSILTHR 206 YG++D +L + Sbjct: 210 YGMIDEVLIKK 220 >UniRef50_A4RXD2 ATP-dependent Clp protease proteolytic subunit n=3 Tax=cellular organisms RepID=A4RXD2_OSTLU Length = 319 Score = 213 bits (543), Expect = 3e-54, Method: Compositional matrix adjust. Identities = 93/176 (52%), Positives = 133/176 (75%) Query: 28 ERSFDIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAG 87 ++S + LL+ R++FL QV+D A+ +++Q+L L+ ++P K+I L+INSPGG +TAG Sbjct: 95 DQSGSPFDSLLRNRIVFLGSQVDDFNADAVISQLLLLDQQDPTKEIKLFINSPGGSVTAG 154 Query: 88 MSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQAT 147 M IYD MQF + VST+C+G AASMGAFLL +G KG+R +PN+R+MIHQPLGG QG A Sbjct: 155 MGIYDAMQFCRAPVSTVCLGLAASMGAFLLASGEKGRRMSMPNARIMIHQPLGGAQGSAV 214 Query: 148 DIEIHAREILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEAVEYGLVDSIL 203 DIEI A+EI+ K +N LMA HTGQ ++ I+ DT+RDR++S EA +YG++D ++ Sbjct: 215 DIEIQAKEIMHHKANLNRLMAFHTGQDVKTIDEDTDRDRYMSPLEAKQYGVIDIVI 270 >UniRef50_Q2J9A8 ATP-dependent Clp protease proteolytic subunit 4 n=152 Tax=Bacteria RepID=CLPP4_FRASC Length = 238 Score = 211 bits (537), Expect = 1e-53, Method: Compositional matrix adjust. Identities = 98/189 (51%), Positives = 136/189 (71%), Gaps = 2/189 (1%) Query: 21 IEQTSRGERSFD--IYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYIN 78 ++ + G S D ++SRLL+ R++FL VED +AN I A++L L AE+P DIYLYIN Sbjct: 21 VQAAASGLGSADDQVFSRLLENRIVFLGSVVEDAVANAISAKLLLLAAEDPAADIYLYIN 80 Query: 79 SPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQP 138 SPGG ++AGM+IYDTMQ++ DV+T+ +G A SMG FLL AG GKR+ LP++R+M+HQP Sbjct: 81 SPGGSVSAGMAIYDTMQYVGNDVATVALGLAGSMGQFLLCAGTAGKRYALPHARIMMHQP 140 Query: 139 LGGYQGQATDIEIHAREILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEAVEYGL 198 GG G A DI I A ++L K + E +A HTGQ++EQIE D++RDR+ +A EA EYGL Sbjct: 141 HGGIGGTAADISIQAEQMLYTKRTLQERIAFHTGQTVEQIETDSDRDRWFTAEEAKEYGL 200 Query: 199 VDSILTHRN 207 VD ++ + Sbjct: 201 VDHVVVRAD 209 >UniRef50_A8RFM5 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Eubacterium dolichum DSM 3991 RepID=A8RFM5_9FIRM Length = 204 Score = 209 bits (533), Expect = 3e-53, Method: Compositional matrix adjust. Identities = 99/200 (49%), Positives = 143/200 (71%), Gaps = 1/200 (0%) Query: 6 ERDNFAPHMALVPMVIEQTSRGERSFDIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLE 65 ER+ ++ +VP +IE+ GE ++D+YS LLKER+I L G+++D M+ I AQ+L+L Sbjct: 2 EREKEVIYLVIVPTIIEKNINGEHAYDLYSCLLKERIIILCGEIDDAMSASICAQLLYL- 60 Query: 66 AENPEKDIYLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKR 125 + + I LYINS GG +TAG++IYD M +I +VSTICMG ASM A LL AG+ GKR Sbjct: 61 STCSKAPIQLYINSNGGSVTAGLAIYDIMHYIPCEVSTICMGMCASMAAVLLCAGSNGKR 120 Query: 126 FCLPNSRVMIHQPLGGYQGQATDIEIHAREILKVKGRMNELMALHTGQSLEQIERDTERD 185 F L NS +MIHQPLGG QGQA D+EI A+ I +VK ++ +++ HT Q + I RD +RD Sbjct: 121 FALANSEIMIHQPLGGMQGQAIDMEIAAQHIQQVKEKLYQILCKHTKQDKDIIIRDCDRD 180 Query: 186 RFLSAPEAVEYGLVDSILTH 205 +++A +A++YG+VD I+T+ Sbjct: 181 FYMNAKQALDYGMVDEIITN 200 >UniRef50_Q9SXJ6 ATP-dependent Clp protease proteolytic subunit 3, chloroplastic n=21 Tax=Embryophyta RepID=CLPP3_ARATH Length = 309 Score = 207 bits (528), Expect = 1e-52, Method: Compositional matrix adjust. Identities = 93/173 (53%), Positives = 134/173 (77%) Query: 31 FDIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSI 90 D + LL++R++FL QV+D A+L+++Q+L L+AE+ E+DI L+INSPGG ITAGM I Sbjct: 84 LDTTNMLLRQRIVFLGSQVDDMTADLVISQLLLLDAEDSERDITLFINSPGGSITAGMGI 143 Query: 91 YDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIE 150 YD M+ K DVST+C+G AASMGAFLL +G+KGKR+C+PNS+VMIHQPLG G+AT++ Sbjct: 144 YDAMKQCKADVSTVCLGLAASMGAFLLASGSKGKRYCMPNSKVMIHQPLGTAGGKATEMS 203 Query: 151 IHAREILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEAVEYGLVDSIL 203 I RE++ K ++N++ + TG+ +IE DT+RD FL+ EA EYGL+D+++ Sbjct: 204 IRIREMMYHKIKLNKIFSRITGKPESEIESDTDRDNFLNPWEAKEYGLIDAVI 256 >UniRef50_Q4JWV4 ATP-dependent Clp protease proteolytic subunit 1 n=24 Tax=Actinobacteria (class) RepID=CLPP1_CORJK Length = 188 Score = 207 bits (526), Expect = 3e-52, Method: Compositional matrix adjust. Identities = 95/172 (55%), Positives = 128/172 (74%) Query: 33 IYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIYD 92 +Y RLL+ER+IFL QV+D +AN + AQ+L L AE+P +DI LYINSPGG +TAGM+IYD Sbjct: 12 VYERLLRERIIFLGSQVDDEIANELCAQILLLSAEDPTRDISLYINSPGGSVTAGMAIYD 71 Query: 93 TMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIH 152 TM++ D++T MG AASMG FLL+AG KGKR+ LP++R+M+HQP G G A DI I Sbjct: 72 TMKYAPCDIATYGMGLAASMGQFLLSAGTKGKRYALPHARIMMHQPSAGVGGTAADIAIQ 131 Query: 153 AREILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEAVEYGLVDSILT 204 A + K M EL+A TGQ++EQI +D++RDR+ +A +A EYG VD ++T Sbjct: 132 AEQFAYTKREMAELIAEFTGQTVEQITKDSDRDRWFTAQQAKEYGFVDHVIT 183 >UniRef50_Q7UK67 ATP-dependent Clp protease proteolytic subunit 1 n=3 Tax=Planctomycetaceae RepID=CLPP1_RHOBA Length = 227 Score = 206 bits (525), Expect = 3e-52, Method: Compositional matrix adjust. Identities = 95/181 (52%), Positives = 134/181 (74%) Query: 23 QTSRGERSFDIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGG 82 Q+ + +R + LL+ R++F+ G++ AN IV ++L+L++EN KDI+LYINSPGG Sbjct: 36 QSYQRQRQMTLGDLLLENRIVFMQGEIHYANANEIVMKLLYLQSENRRKDIHLYINSPGG 95 Query: 83 VITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGY 142 +TA ++IYDTMQ + V+T C+G+A S A LL GAKGKRFCLPNSRVM+HQPLGG Sbjct: 96 SVTATLAIYDTMQMLSCPVATYCVGEACSGAAVLLIGGAKGKRFCLPNSRVMMHQPLGGV 155 Query: 143 QGQATDIEIHAREILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEAVEYGLVDSI 202 GQ +DIEI A E+ + + ++NE+++ H G+S+EQI +DT+RD FL A +A EYGLVD + Sbjct: 156 SGQVSDIEIQAAEMFRYRDKLNEIISSHCGKSVEQIAKDTDRDFFLDAQQAKEYGLVDDL 215 Query: 203 L 203 L Sbjct: 216 L 216 >UniRef50_Q47MU3 ATP-dependent Clp protease proteolytic subunit 1 n=82 Tax=Bacteria RepID=CLPP1_THEFY Length = 222 Score = 202 bits (515), Expect = 4e-51, Method: Compositional matrix adjust. Identities = 104/207 (50%), Positives = 147/207 (71%), Gaps = 2/207 (0%) Query: 3 YSGERDNFAPHMALV-PMVIEQTSRGERSFDIYSRLLKERVIFLTGQVEDHMANLIVAQM 61 Y G AP V P IE+T+ G + + Y++L +ER+IF+ Q++D AN I+AQM Sbjct: 12 YGGGMAPMAPQSRYVLPSYIERTAYGVKEMNPYNKLFEERIIFVGVQIDDTSANDIIAQM 71 Query: 62 LFLEAENPEKDIYLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGA 121 + LE + ++DI LYINSPGG T+ M+IYDTMQF++PD+ T+C+GQAAS A LL G Sbjct: 72 MTLEHIDSDRDITLYINSPGGSFTSLMAIYDTMQFVRPDIQTVCVGQAASAAAVLLAGGT 131 Query: 122 KGKRFCLPNSRVMIHQPLG-GYQGQATDIEIHAREILKVKGRMNELMALHTGQSLEQIER 180 KGKR LPNSR++IHQP G GQA+D+EI A EI++++ ++ ++A HTG+S+E+I R Sbjct: 132 KGKRTALPNSRILIHQPATEGTHGQASDVEIMANEIMRIRHQLETILAKHTGRSVEEISR 191 Query: 181 DTERDRFLSAPEAVEYGLVDSILTHRN 207 D ERD+ L+A EA EYG+VD +L +R Sbjct: 192 DIERDKILTAEEAKEYGIVDDVLPYRK 218 >UniRef50_Q82CA5 ATP-dependent Clp protease proteolytic subunit 4 n=57 Tax=Actinobacteridae RepID=CLPP4_STRAW Length = 226 Score = 200 bits (509), Expect = 2e-50, Method: Compositional matrix adjust. Identities = 101/206 (49%), Positives = 148/206 (71%), Gaps = 4/206 (1%) Query: 3 YSGERDNFAPHMALVPMVIEQTSRGERSFDIYSRLLKERVIFLTGQVEDHMANLIVAQML 62 Y+G R A ++P +E+TS+G R +D Y++L +ERVIFL Q++D AN ++AQ+L Sbjct: 17 YTGAR---AESRYVIPRFVERTSQGVREYDPYAKLFEERVIFLGVQIDDASANDVMAQLL 73 Query: 63 FLEAENPEKDIYLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAK 122 LE+ +P++DI +YINSPGG TA +IYDTMQF+KPD+ T+CMGQAAS A LL AG Sbjct: 74 CLESMDPDRDISVYINSPGGSFTALTAIYDTMQFVKPDIQTVCMGQAASAAAILLAAGTP 133 Query: 123 GKRFCLPNSRVMIHQPLGGY-QGQATDIEIHAREILKVKGRMNELMALHTGQSLEQIERD 181 GKR LPN+RV+IHQP +GQ +D+EI A EIL+++ ++ +++A H+ +E+I D Sbjct: 134 GKRMALPNARVLIHQPYSETGRGQVSDLEIAANEILRMRSQLEDMLAKHSTTPIEKIRED 193 Query: 182 TERDRFLSAPEAVEYGLVDSILTHRN 207 ERD+ L+A +A+ YGL+D I++ R Sbjct: 194 IERDKILTAEDALAYGLIDQIISTRK 219 >UniRef50_Q94B60 ATP-dependent Clp protease proteolytic subunit 4, chloroplastic n=12 Tax=Embryophyta RepID=CLPP4_ARATH Length = 292 Score = 199 bits (507), Expect = 4e-50, Method: Compositional matrix adjust. Identities = 90/182 (49%), Positives = 134/182 (73%), Gaps = 1/182 (0%) Query: 22 EQTSRGERSFDIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPG 81 E RG S D+ LL+ER++FL ++D +A+ I++Q+L L+A++P+KDI L+INSPG Sbjct: 70 ESAIRGAES-DVMGLLLRERIVFLGSSIDDFVADAIMSQLLLLDAKDPKKDIKLFINSPG 128 Query: 82 GVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGG 141 G ++A M+IYD +Q ++ DVSTI +G AAS + +L AG KGKRF +PN+R+MIHQPLGG Sbjct: 129 GSLSATMAIYDVVQLVRADVSTIALGIAASTASIILGAGTKGKRFAMPNTRIMIHQPLGG 188 Query: 142 YQGQATDIEIHAREILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEAVEYGLVDS 201 GQA D+EI A+E++ K + ++A T +S EQ+ +D +RDR++S EAVEYGL+D Sbjct: 189 ASGQAIDVEIQAKEVMHNKNNVTSIIAGCTSRSFEQVLKDIDRDRYMSPIEAVEYGLIDG 248 Query: 202 IL 203 ++ Sbjct: 249 VI 250 >UniRef50_D1BZJ7 ATP-dependent Clp protease proteolytic subunit n=27 Tax=Actinobacteridae RepID=D1BZJ7_XYLCX Length = 236 Score = 194 bits (493), Expect = 2e-48, Method: Compositional matrix adjust. Identities = 96/194 (49%), Positives = 144/194 (74%), Gaps = 2/194 (1%) Query: 16 LVPMVIEQTSRGERSFDIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYL 75 ++P E+T+ G + D Y++L ++R+IFL QV+D A+ ++AQ+L LE+++P++DI + Sbjct: 36 VLPQFEERTAYGFKRQDPYTKLFEDRIIFLGVQVDDASADDVMAQLLVLESQDPDRDIMM 95 Query: 76 YINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMI 135 YINSPGG TA ++YDTMQ+IKP + T+C+GQAAS A LL AG KGKR+ LPN+RV+I Sbjct: 96 YINSPGGSFTAMTALYDTMQYIKPQIQTVCLGQAASAAAVLLAAGQKGKRYALPNARVLI 155 Query: 136 HQPL--GGYQGQATDIEIHAREILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEA 193 HQP GG QA+DIEIHA E+++++ + E +A H+G++ EQ++ D ERD+ L+A +A Sbjct: 156 HQPAMEGGGYAQASDIEIHANELIRMREWLEETLASHSGRTPEQVKEDIERDKILTAAQA 215 Query: 194 VEYGLVDSILTHRN 207 +YGLVD +L R Sbjct: 216 KDYGLVDLVLESRK 229 >UniRef50_B8AMH6 ATP-dependent Clp protease proteolytic subunit n=4 Tax=Poaceae RepID=B8AMH6_ORYSI Length = 464 Score = 192 bits (489), Expect = 4e-48, Method: Compositional matrix adjust. Identities = 86/136 (63%), Positives = 110/136 (80%) Query: 68 NPEKDIYLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFC 127 N +DI +Y+NSPGG +TAGM+I+DTM+ I+PDVST+C+G AASMGAFLL+AG KGKR+ Sbjct: 315 NLTEDIIMYVNSPGGSVTAGMAIFDTMKHIRPDVSTVCIGLAASMGAFLLSAGTKGKRYS 374 Query: 128 LPNSRVMIHQPLGGYQGQATDIEIHAREILKVKGRMNELMALHTGQSLEQIERDTERDRF 187 LPNSR+MIHQPLGG QGQ TD+EI A E+L K +N +A HTGQ L++I DT+RD F Sbjct: 375 LPNSRIMIHQPLGGAQGQETDLEIQANEMLHHKANLNGYLAYHTGQPLDKINVDTDRDYF 434 Query: 188 LSAPEAVEYGLVDSIL 203 +SA EA EYGL+D ++ Sbjct: 435 MSAKEAKEYGLIDGVI 450 >UniRef50_A7ATV1 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Babesia bovis RepID=A7ATV1_BABBO Length = 225 Score = 190 bits (483), Expect = 2e-47, Method: Compositional matrix adjust. Identities = 87/169 (51%), Positives = 123/169 (72%) Query: 38 LKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIYDTMQFI 97 ++ R +FL+G++ D + ++ Q+ + ENP ++I YINSPGG ++AG++IYD +Q + Sbjct: 44 IRTRTLFLSGELNDEKSYRLINQIFRMNEENPNENIKFYINSPGGSVSAGLAIYDILQSL 103 Query: 98 KPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREIL 157 K V TIC+GQAASMGAFLL AGAKG R +PNSR+MIHQPLGG G+ TDI+I A EIL Sbjct: 104 KMRVETICIGQAASMGAFLLAAGAKGLRSAMPNSRIMIHQPLGGAHGEVTDIKIQANEIL 163 Query: 158 KVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEAVEYGLVDSILTHR 206 ++ +N + TG+S+EQ+E+D ERD ++ EA+EYGL+D I T R Sbjct: 164 HIRQILNAHFSHFTGKSIEQVEQDCERDYYMRPSEAMEYGLIDRICTTR 212 >UniRef50_UPI00016C35C0 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Gemmata obscuriglobus UQM 2246 RepID=UPI00016C35C0 Length = 208 Score = 189 bits (480), Expect = 5e-47, Method: Compositional matrix adjust. Identities = 86/166 (51%), Positives = 122/166 (73%) Query: 39 KERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIYDTMQFIK 98 ++R+IFL + + +A L++ Q+L+LE E +DI LYINSPGG ++A ++IYDTMQF++ Sbjct: 37 EQRIIFLNWPINNDVATLVIKQLLYLEYEKKSEDISLYINSPGGSVSATLAIYDTMQFMQ 96 Query: 99 PDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREILK 158 ++T CMG AAS A LL AG+ KR+ +PNS+VMIHQP G GQ +DIEI A EIL+ Sbjct: 97 SPINTFCMGLAASGAAVLLAAGSPKKRYAMPNSKVMIHQPYGQVGGQVSDIEIQANEILR 156 Query: 159 VKGRMNELMALHTGQSLEQIERDTERDRFLSAPEAVEYGLVDSILT 204 +GR+NE++A HTGQ +E I R+T+RD++ A EA +GLVD +L Sbjct: 157 ERGRLNEILAKHTGQPVEIIARETDRDKYYHADEAKAFGLVDEVLV 202 >UniRef50_Q36863 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Cyanophora paradoxa RepID=CLPP1_CYAPA Length = 194 Score = 189 bits (480), Expect = 6e-47, Method: Compositional matrix adjust. Identities = 91/194 (46%), Positives = 128/194 (65%), Gaps = 3/194 (1%) Query: 17 VPMVIEQTSRGERS---FDIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDI 73 + ++I+Q + E + S+LL+ R+I + V+D + N IV Q+L+LE E+ KDI Sbjct: 1 MTILIQQYTNDENKKLELNNISKLLQNRIILFSQTVDDEICNSIVGQLLYLENEDSTKDI 60 Query: 74 YLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRV 133 L+INSPGG +TAG+S+YDT+Q + DVSTIC G AASMGA LL AG + KRF +SR+ Sbjct: 61 RLFINSPGGSVTAGLSVYDTIQNLSVDVSTICFGLAASMGAVLLAAGVENKRFAFASSRI 120 Query: 134 MIHQPLGGYQGQATDIEIHAREILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEA 193 MIHQPL + + ++I R K +N +++ HT Q L+QIE DTERD FLSA EA Sbjct: 121 MIHQPLSKVEAPWSHLDIQIRNGAYFKNLLNNILSFHTKQELKQIETDTERDFFLSATEA 180 Query: 194 VEYGLVDSILTHRN 207 +YG++D I + N Sbjct: 181 KQYGIIDHIFINNN 194 >UniRef50_C9RRI3 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Fibrobacter succinogenes subsp. succinogenes S85 RepID=C9RRI3_FIBSS Length = 193 Score = 187 bits (475), Expect = 2e-46, Method: Compositional matrix adjust. Identities = 93/168 (55%), Positives = 123/168 (73%), Gaps = 3/168 (1%) Query: 37 LLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIYDTMQF 96 L +R IFL G V+D A IV Q+L+L++ N E DI +INSPGGVI++G++IYD M Sbjct: 23 LASKRRIFLWGGVDDESAERIVKQLLYLDSLNHE-DIIFFINSPGGVISSGLAIYDCMNA 81 Query: 97 IKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPL--GGYQGQATDIEIHAR 154 I+ DV T+C GQAASMGA LLTAGAKGKR PN+R+MIHQPL G A+DI+I A Sbjct: 82 IQSDVVTVCCGQAASMGAVLLTAGAKGKRCAWPNARIMIHQPLIHGEIVAPASDIQIQAE 141 Query: 155 EILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEAVEYGLVDSI 202 E+L+++G +++A +G ++EQI+RDTERD F+SA EA YGLVD + Sbjct: 142 EMLRIRGITGKILAETSGHTIEQIDRDTERDNFMSAEEARNYGLVDKV 189 >UniRef50_C7QFY1 ATP-dependent Clp protease proteolytic subunit n=3 Tax=Actinomycetales RepID=C7QFY1_CATAD Length = 201 Score = 181 bits (458), Expect = 2e-44, Method: Compositional matrix adjust. Identities = 85/190 (44%), Positives = 127/190 (66%) Query: 17 VPMVIEQTSRGERSFDIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLY 76 +P V Q GER DIYS LL ER+I+L ++ +AN ++AQ+L LE++ P+++I LY Sbjct: 11 IPYVTTQRPGGERVTDIYSHLLTERIIYLGTAIDAGVANALIAQLLHLESDGPDREISLY 70 Query: 77 INSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIH 136 +N GG +T+ ++IYDTMQ IK + T C+GQA ++GA LL AG G R LP++RV++H Sbjct: 71 VNCEGGDLTSMLAIYDTMQHIKAPIRTTCVGQAIAVGAVLLAAGTPGLRSVLPHARVVLH 130 Query: 137 QPLGGYQGQATDIEIHAREILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEAVEY 196 QP QG D+ I A E+++++ + ++ HTGQ+ E++ DT+RDR +A AVEY Sbjct: 131 QPAARGQGAIPDLIIQADELVRMRSELEAILTQHTGQTAERLRHDTDRDRVFTAAAAVEY 190 Query: 197 GLVDSILTHR 206 GL D +L R Sbjct: 191 GLADQVLGPR 200 >UniRef50_C4R657 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Pichia pastoris GS115 RepID=C4R657_PICPG Length = 226 Score = 180 bits (457), Expect = 2e-44, Method: Compositional matrix adjust. Identities = 84/179 (46%), Positives = 123/179 (68%), Gaps = 4/179 (2%) Query: 32 DIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIY 91 D++++LL ER+I+L G ++D A I AQ+L+LE+++ K I +YINSPGG +TAG++IY Sbjct: 42 DLFTKLLNERIIYLAGGIDDAQATSITAQLLYLESQSTSKQINIYINSPGGSVTAGLAIY 101 Query: 92 DTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQP--LGGYQGQATDI 149 DT+Q+I+ VST+C+GQA SM + LL +G GKR LPN+ +M+HQP G +GQATDI Sbjct: 102 DTIQYIRAPVSTVCLGQACSMASLLLASGTHGKRLILPNATIMVHQPSSANGIKGQATDI 161 Query: 150 EIHAREILKVKGRMNELMALHTGQSL--EQIERDTERDRFLSAPEAVEYGLVDSILTHR 206 EI+AR I+ K ++ L H ++ ++I ERDRF+ EAV GL D +L + Sbjct: 162 EIYARHIINTKQKLQTLYLKHMSPTMTVDEITALLERDRFMEPEEAVSLGLADRVLERK 220 >UniRef50_C5C3N3 ATP-dependent Clp protease proteolytic subunit n=3 Tax=Actinomycetales RepID=C5C3N3_BEUC1 Length = 197 Score = 180 bits (456), Expect = 3e-44, Method: Compositional matrix adjust. Identities = 87/190 (45%), Positives = 138/190 (72%) Query: 17 VPMVIEQTSRGERSFDIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLY 76 +P V+E+ ER+ D++SRLL +R+++L +++ +AN+++AQ++ LE++NP+ I+LY Sbjct: 6 IPYVVEKRPGSERAMDVFSRLLSDRIVYLGTAIDEGVANVLIAQLIHLESDNPDLPIHLY 65 Query: 77 INSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIH 136 INSPGG I A +S+YD MQ+++P V+T C+GQAA+ A LL GAKG+R L + RV++H Sbjct: 66 INSPGGDIPATLSVYDAMQYVRPPVATTCLGQAATTAALLLAGGAKGQRSILSHGRVVLH 125 Query: 137 QPLGGYQGQATDIEIHAREILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEAVEY 196 QP G +G D+ + A EI++V+ ++ E+++ HTGQS+E + RDT+R+ L A A Y Sbjct: 126 QPTGQGRGTVPDLILAADEIVRVRSQLEEVLSAHTGQSVETLRRDTDRELILDAERAKAY 185 Query: 197 GLVDSILTHR 206 G+VD ILT R Sbjct: 186 GVVDHILTER 195 >UniRef50_D2Q440 Endopeptidase Clp n=5 Tax=Actinomycetales RepID=D2Q440_9ACTO Length = 211 Score = 179 bits (454), Expect = 6e-44, Method: Compositional matrix adjust. Identities = 88/190 (46%), Positives = 136/190 (71%) Query: 17 VPMVIEQTSRGERSFDIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLY 76 +P VI Q+ RGER D+YS LL ER+I+L ++ +AN ++AQ+L LEA+ P++DI LY Sbjct: 6 IPNVITQSPRGERIMDVYSHLLSERIIYLGTGIDAGVANALIAQLLHLEADKPDQDINLY 65 Query: 77 INSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIH 136 IN GG +TA ++IYDT+Q+I+ VST+C+GQA + GA LL AG G+R LP++R+++H Sbjct: 66 INCEGGDMTAMLAIYDTIQYIRSPVSTLCVGQAIAAGAVLLAAGEPGRRAVLPHARIVLH 125 Query: 137 QPLGGYQGQATDIEIHAREILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEAVEY 196 QP QG D+ + A E+++V+ ++ +++ HTGQ++EQ+ DT+RD L+A A Y Sbjct: 126 QPAARGQGTIPDLILQADEVVRVRAQVESILSAHTGQTIEQLRHDTDRDHVLTAEGARAY 185 Query: 197 GLVDSILTHR 206 G+VD ++ HR Sbjct: 186 GIVDEVIQHR 195 >UniRef50_Q72R01 ATP-dependent Clp protease proteolytic subunit 2 n=9 Tax=Bacteria RepID=CLPP2_LEPIC Length = 197 Score = 178 bits (451), Expect = 1e-43, Method: Compositional matrix adjust. Identities = 84/174 (48%), Positives = 119/174 (68%), Gaps = 2/174 (1%) Query: 33 IYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIYD 92 I L R IFL G V D + +V ++L+LE ++P K I YINSPGGV+T+GM+++D Sbjct: 19 ISKNFLDHRKIFLWGPVTDESSKDLVGKLLYLEMKDPGKKITFYINSPGGVVTSGMTVFD 78 Query: 93 TMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQ--GQATDIE 150 T++ I V T+CMG AASMG+ LL AG KG+R PN +VMIHQP G Q ATD++ Sbjct: 79 TIKMISSPVHTVCMGMAASMGSVLLAAGTKGERSIWPNGKVMIHQPSIGGQIVAPATDLK 138 Query: 151 IHAREILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEAVEYGLVDSILT 204 IHA EILK K ++N+++A G + ++E DT+RD ++ A EA++YG+VD + T Sbjct: 139 IHAEEILKTKTKLNQILADACGHPISKLEEDTDRDYYMDAEEAIKYGIVDKLAT 192 >UniRef50_UPI0000DB7F4F PREDICTED: similar to Putative ATP-dependent Clp protease proteolytic subunit, mitochondrial precursor (Endopeptidase Clp), partial n=1 Tax=Apis mellifera RepID=UPI0000DB7F4F Length = 222 Score = 177 bits (450), Expect = 2e-43, Method: Compositional matrix adjust. Identities = 80/117 (68%), Positives = 100/117 (85%) Query: 16 LVPMVIEQTSRGERSFDIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYL 75 LVPMV+EQTSRGER+FDIYSRLLKER+IFLTG V D +A+LI AQ+L+LE+ NP+K+I Sbjct: 106 LVPMVVEQTSRGERAFDIYSRLLKERIIFLTGPVYDQVASLISAQLLYLESVNPKKEISF 165 Query: 76 YINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSR 132 YINSPGGV++AG++IYDTMQ+I+ VST+C+GQAASMG+ LL G RF LPN+R Sbjct: 166 YINSPGGVVSAGLAIYDTMQYIRCPVSTVCIGQAASMGSLLLCGGEPNNRFALPNAR 222 >UniRef50_Q5Z0M4 ATP-dependent Clp protease proteolytic subunit 1 n=2 Tax=Actinomycetales RepID=CLPP1_NOCFA Length = 197 Score = 177 bits (449), Expect = 2e-43, Method: Compositional matrix adjust. Identities = 84/192 (43%), Positives = 132/192 (68%), Gaps = 1/192 (0%) Query: 17 VPMVIEQTSRG-ERSFDIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYL 75 +P VI Q RG ER DIYS LL ER+++L ++ +AN ++AQ+L LE+E+P+++I Sbjct: 6 IPNVIAQHPRGGERITDIYSHLLAERIVYLGTPIDSGVANALIAQLLHLESESPDQEINF 65 Query: 76 YINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMI 135 YIN GG + + +++YDTMQ I V T C+GQA ++GA LL GA G+R LP++RV++ Sbjct: 66 YINCEGGDLPSMLAVYDTMQHIGAPVHTTCVGQAIAVGAVLLAGGAPGQRAMLPHARVVL 125 Query: 136 HQPLGGYQGQATDIEIHAREILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEAVE 195 HQP QG D+ + A E+++++ + +++ HTG+S EQ+ DT+RDR +A A+E Sbjct: 126 HQPAARGQGPIPDLILQADELVRMRSEIEAILSRHTGRSPEQLREDTDRDRVFTATAALE 185 Query: 196 YGLVDSILTHRN 207 YGL+D++L+ R Sbjct: 186 YGLIDTVLSPRG 197 >UniRef50_B1X4K7 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Paulinella chromatophora RepID=B1X4K7_PAUCH Length = 225 Score = 176 bits (447), Expect = 3e-43, Method: Compositional matrix adjust. Identities = 88/199 (44%), Positives = 133/199 (66%), Gaps = 10/199 (5%) Query: 8 DNFAPHMALVPMVIEQTSRGERSFDIYS--RLLKERVIFLTGQVEDHMANLIVAQMLFLE 65 +N++P ++EQ R E +YS + ++R+I ++ ++ D A+ I+AQ+L LE Sbjct: 30 NNYSP-------LLEQEYR-ESVKGLYSIPKNTEDRIILISEEMNDEDASDIIAQLLMLE 81 Query: 66 AENPEKDIYLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKR 125 AENP++DI +YIN GG + + IYDTMQ IKPDV T+C G A M FLL+ GAKGKR Sbjct: 82 AENPDEDIQVYINCMGGSMYGFVGIYDTMQAIKPDVVTLCYGSAFEMSGFLLSGGAKGKR 141 Query: 126 FCLPNSRVMIHQPLGGYQGQATDIEIHAREILKVKGRMNELMALHTGQSLEQIERDTERD 185 LPN+R+M++QP + G TD++++ +E++ ++ + L+A HTGQ E++ DT RD Sbjct: 142 LALPNARIMLNQPETSFYGCITDLQLYNKELMLMRKNICSLIAAHTGQRFEKVTADTNRD 201 Query: 186 RFLSAPEAVEYGLVDSILT 204 +F SA EA+EYGL+D IL Sbjct: 202 QFFSAAEAIEYGLIDRILN 220 >UniRef50_Q7NEW1 ATP-dependent Clp protease proteolytic subunit 2 n=22 Tax=Cyanobacteria RepID=CLPP2_GLOVI Length = 218 Score = 176 bits (446), Expect = 5e-43, Method: Compositional matrix adjust. Identities = 79/166 (47%), Positives = 122/166 (73%), Gaps = 2/166 (1%) Query: 40 ERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPG--GVITAGMSIYDTMQFI 97 ER+++L + D +A L++AQ+L+LE+E+ K I +YINSPG G T+ ++YDTM+ + Sbjct: 36 ERIVYLGTPINDVVAELLIAQLLYLESEDNAKPIEIYINSPGVAGFETSAFAVYDTMRHV 95 Query: 98 KPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREIL 157 + + TIC+G A A L+ AG KG+R LPNSR++++QP GG +GQATDI I A+E+L Sbjct: 96 RMPIKTICLGLAGGFSALLMAAGTKGQRMSLPNSRIILYQPYGGARGQATDINIRAQELL 155 Query: 158 KVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEAVEYGLVDSIL 203 K +N+L+++HTG+++EQI++DTER ++S EAV YGL+D +L Sbjct: 156 TTKRTLNQLLSIHTGKTVEQIDKDTERLFYMSPQEAVSYGLIDKVL 201 >UniRef50_P56772 ATP-dependent Clp protease proteolytic subunit 1 n=184 Tax=Streptophytina RepID=CLPP1_ARATH Length = 196 Score = 174 bits (441), Expect = 2e-42, Method: Compositional matrix adjust. Identities = 82/178 (46%), Positives = 121/178 (67%), Gaps = 2/178 (1%) Query: 27 GERSF-DIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVIT 85 G+ S+ DIY+RL +ER+ FL +V+ ++N +++ M++L E KD+YL+INSPGG + Sbjct: 16 GDTSWVDIYNRLYRERLFFLGQEVDTEISNQLISLMIYLSIEKDTKDLYLFINSPGGWVI 75 Query: 86 AGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGG-YQG 144 +GM+IYDTMQF++PDV TICMG AAS+ +F+L GA KR P++RVMIHQP Y+ Sbjct: 76 SGMAIYDTMQFVRPDVQTICMGLAASIASFILVGGAITKRIAFPHARVMIHQPASSFYEA 135 Query: 145 QATDIEIHAREILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEAVEYGLVDSI 202 Q + + A E+LK++ + + TG+ + I D ERD F+SA EA YG+VD + Sbjct: 136 QTGEFILEAEELLKLRETITRVYVQRTGKPIWVISEDMERDVFMSATEAQAYGIVDLV 193 >UniRef50_Q06J25 ATP-dependent Clp protease proteolytic subunit n=2 Tax=Eukaryota RepID=CLPP_BIGNA Length = 195 Score = 174 bits (440), Expect = 2e-42, Method: Compositional matrix adjust. Identities = 82/191 (42%), Positives = 131/191 (68%), Gaps = 2/191 (1%) Query: 17 VPMVI--EQTSRGERSFDIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIY 74 +P V+ E T + DIY+RL K+R+IFL ++D +N I++ +L L++E+ E+ IY Sbjct: 5 IPKVLFKESTDTTPQWVDIYTRLYKDRIIFLFQLLDDDFSNQIISMLLHLDSESKEELIY 64 Query: 75 LYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVM 134 YINS GG + +G+SIYDTM FI ++ T+C+G A+S+ + +L G + KRF LP+SRV+ Sbjct: 65 FYINSVGGSVLSGISIYDTMNFINSEIVTLCIGIASSISSLILANGKRTKRFILPHSRVL 124 Query: 135 IHQPLGGYQGQATDIEIHAREILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEAV 194 +HQP+ GQA+DI I + EIL+++ + ++ + Q++ ++ RD +RD FLS+ EA Sbjct: 125 LHQPIMQVSGQASDILIESEEILRLRRILTKIYIENIDQTISRVARDIDRDCFLSSREAK 184 Query: 195 EYGLVDSILTH 205 YG+VD ILT+ Sbjct: 185 NYGIVDYILTN 195 >UniRef50_Q3LWG6 ATP-dependent Clp protease proteolytic subunit n=2 Tax=Bigelowiella natans RepID=Q3LWG6_BIGNA Length = 264 Score = 171 bits (434), Expect = 1e-41, Method: Compositional matrix adjust. Identities = 78/176 (44%), Positives = 113/176 (64%) Query: 32 DIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIY 91 DI +F TG++ D + N ++ +LFL ++ I L INSPGG I AG+++Y Sbjct: 58 DISDFFENNNFLFCTGEINDQLVNSLINSILFLSYKDNNSSIKLCINSPGGSIMAGLALY 117 Query: 92 DTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEI 151 D + + +TI +G AASMGAFLL +G G RF PN+R+MIHQP+GG QG A DIEI Sbjct: 118 DAIVWTNKSTNTISLGLAASMGAFLLASGTNGLRFSTPNTRIMIHQPIGGIQGNAVDIEI 177 Query: 152 HAREILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEAVEYGLVDSILTHRN 207 +E+L + +N L++ T QSL IE DT+RD++++ EA EYG++D +L R+ Sbjct: 178 QVKELLYHRNNINYLLSKFTDQSLSMIESDTDRDKYMTPLEAKEYGIIDRVLNCRD 233 >UniRef50_Q9MUV8 ATP-dependent Clp protease proteolytic subunit n=4 Tax=Viridiplantae RepID=CLPP_MESVI Length = 229 Score = 171 bits (433), Expect = 1e-41, Method: Compositional matrix adjust. Identities = 77/176 (43%), Positives = 120/176 (68%) Query: 32 DIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIY 91 D+Y+RL +ER++FL ++D +AN ++ M+FL +E+ K I+ YINSPGG + AG+ +Y Sbjct: 22 DVYNRLYRERILFLGEDLDDEVANQLIGVMVFLNSEDDTKGIFFYINSPGGSMNAGLGVY 81 Query: 92 DTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEI 151 D +Q + DV+TICMG AASM +F+L G G+R P++RVM+HQP+GG G+A + Sbjct: 82 DMIQHVNVDVTTICMGLAASMASFILAGGTPGQRLMFPHARVMLHQPMGGNGGKAKYMVE 141 Query: 152 HAREILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEAVEYGLVDSILTHRN 207 + E+ +++ + L TGQSLE+I +D RD F+ +A EYGL+D ++T+ N Sbjct: 142 ESVEVKRLRELIAHLYVKRTGQSLEKIRKDMNRDNFMRPRQAKEYGLIDHMVTNVN 197 >UniRef50_Q2K5Q0 ATP-dependent Clp protease proteolytic subunit 3 n=43 Tax=Bacteria RepID=CLPP3_RHIEC Length = 194 Score = 171 bits (432), Expect = 2e-41, Method: Compositional matrix adjust. Identities = 82/172 (47%), Positives = 118/172 (68%), Gaps = 1/172 (0%) Query: 35 SRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIYDTM 94 + L K R IF+ G + +A + +Q++ L A + E DI +Y+NSPGG + +G SI+D + Sbjct: 21 ANLFKSRSIFIYGPINQELAQKVCSQLVALAAASDE-DIRIYVNSPGGHVESGDSIHDMV 79 Query: 95 QFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAR 154 +FIKP V I G AS GA + A + +R CLPN+R ++HQP GG +G A+DIEI AR Sbjct: 80 KFIKPKVWMIGTGWVASAGALIYVAAPRERRLCLPNTRFLLHQPSGGTRGMASDIEIQAR 139 Query: 155 EILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEAVEYGLVDSILTHR 206 EI+K+ R+N++MA TGQ LE+I +DT+RD +LSA EA +YGLV I+T + Sbjct: 140 EIIKMNERLNKIMAEATGQPLEKIAKDTDRDYWLSAEEAKDYGLVSRIVTSQ 191 >UniRef50_UPI0001AF02E3 ATP-dependent Clp protease n=1 Tax=Streptomyces ghanaensis ATCC 14672 RepID=UPI0001AF02E3 Length = 211 Score = 170 bits (430), Expect = 3e-41, Method: Compositional matrix adjust. Identities = 79/194 (40%), Positives = 126/194 (64%), Gaps = 2/194 (1%) Query: 16 LVPMVIEQTSRGERSFDIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYL 75 ++P + E+T+ G R+ D Y++LL+ER++ L +++ AN ++AQ L+LE P++DI L Sbjct: 9 VLPELTERTASGHRTTDPYAKLLQERIVLLGTPIDETSANDVMAQFLYLEHRAPDRDISL 68 Query: 76 YINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMI 135 Y+NSPGG A +IYDT++F+ DV T+C+G+A A LL AG GKR LP +R+++ Sbjct: 69 YVNSPGGSFHAMSTIYDTLRFVSCDVETVCLGRAEGTAALLLAAGTPGKRCVLPGARLVL 128 Query: 136 HQ--PLGGYQGQATDIEIHAREILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEA 193 Q P G +G+A+D+ A E+ +++ RM +++ H G++ EQ D ERD L A A Sbjct: 129 RQPDPSGPLEGRASDLAARAEELGRIRSRMEDMLVRHAGRTPEQARADLERDTVLDARAA 188 Query: 194 VEYGLVDSILTHRN 207 V++GL D I+ R Sbjct: 189 VDHGLADRIVPDRR 202 >UniRef50_C1N254 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Micromonas pusilla CCMP1545 RepID=C1N254_9CHLO Length = 195 Score = 169 bits (429), Expect = 4e-41, Method: Compositional matrix adjust. Identities = 79/168 (47%), Positives = 116/168 (69%) Query: 38 LKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIYDTMQFI 97 + +R IFL G+V+D A+ +V +MLFL+A +PE I LY+NS GGV+T+G++IYD MQ + Sbjct: 1 MGQRRIFLNGRVDDKSAHSLVGKMLFLDAVDPETPIVLYVNSGGGVVTSGLAIYDVMQHV 60 Query: 98 KPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREIL 157 +P V T+C+G A SM A LL AG KG R+ LPN+RVM+HQP GQ TDI I A + Sbjct: 61 RPPVYTVCIGHAESMAAVLLCAGEKGHRYVLPNARVMVHQPHHVISGQTTDILIKATKAE 120 Query: 158 KVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEAVEYGLVDSILTH 205 + + +++A H+G+S ++ ERD +++A EAV +GL D ++TH Sbjct: 121 HTRTTLRDIIAKHSGRSAGEVIGVLERDTYMTAAEAVTFGLADEVITH 168 >UniRef50_D1NE80 ATP-dependent Clp protease proteolytic subunit (Fragment) n=2 Tax=Haemophilus influenzae HK1212 RepID=D1NE80_HAEIN Length = 269 Score = 169 bits (429), Expect = 4e-41, Method: Compositional matrix adjust. Identities = 73/113 (64%), Positives = 94/113 (83%) Query: 94 MQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHA 153 ++FIKPD+ T+C+GQA SMGAFLL G GKR LPN+RVMIHQPLGG++GQA+DI+IHA Sbjct: 157 VEFIKPDIRTLCIGQACSMGAFLLAGGTAGKRAALPNARVMIHQPLGGFRGQASDIQIHA 216 Query: 154 REILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEAVEYGLVDSILTHR 206 +EILK+K +N+ +A HTGQS+E+IE+DT+RD F+SA EA YGLVD +L R Sbjct: 217 QEILKIKHTLNDRLAFHTGQSIERIEKDTDRDNFMSAEEAQAYGLVDEVLVKR 269 >UniRef50_Q1PYX1 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1PYX1_9BACT Length = 208 Score = 169 bits (428), Expect = 5e-41, Method: Compositional matrix adjust. Identities = 77/176 (43%), Positives = 119/176 (67%), Gaps = 1/176 (0%) Query: 32 DIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIY 91 D+ +RLLK R I +T +V MA ++ Q+L LEA+N E DI ++INSPGG AG ++Y Sbjct: 30 DLIARLLKTRTIIVTDEVNKKMAERVITQLLLLEADNDE-DIRVFINSPGGDADAGFAMY 88 Query: 92 DTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEI 151 D ++F+KP + IC G AS +L K R+ LP+SR++IHQP G G A+D++I Sbjct: 89 DMLRFVKPKIKAICSGVVASAAVIILLGAKKEDRYSLPSSRILIHQPSTGIHGTASDLQI 148 Query: 152 HAREILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEAVEYGLVDSILTHRN 207 A EILK + +MN ++++ TGQ + ++E DT+R+ ++SA EA +YGLV+ I++ + Sbjct: 149 EATEILKCREKMNRMISVETGQPIGKVETDTKRNFWMSAEEACQYGLVNKIISSSD 204 >UniRef50_A0LYF8 ATP-dependent Clp protease proteolytic subunit n=10 Tax=Bacteroidetes RepID=A0LYF8_GRAFK Length = 186 Score = 168 bits (426), Expect = 1e-40, Method: Compositional matrix adjust. Identities = 81/171 (47%), Positives = 124/171 (72%), Gaps = 1/171 (0%) Query: 33 IYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIYD 92 I ++LL++R I++ G+V D A ++ ++ +L+ E + +I L+INSPGG +T G +IYD Sbjct: 15 IDNKLLEKRKIYMWGEVSDKTAKYVIDRLEYLDLEG-DGEIQLFINSPGGYVTDGFAIYD 73 Query: 93 TMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIH 152 T+ ++ VSTIC G AASMG+ LL+AG KG+RF P+++VMIHQP GG +GQA++IEI Sbjct: 74 TIMSLESPVSTICTGLAASMGSILLSAGKKGRRFIQPHAKVMIHQPSGGARGQASNIEIA 133 Query: 153 AREILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEAVEYGLVDSIL 203 A EILK K E++A + GQS++++ +D RD ++ A E++EYG+VD I Sbjct: 134 ANEILKTKHLSAEIIAENCGQSVDKVLKDFNRDYWMDAEESMEYGIVDGIF 184 >UniRef50_A4W647 ATP-dependent Clp protease proteolytic subunit n=5 Tax=Bacteria RepID=A4W647_ENT38 Length = 201 Score = 166 bits (419), Expect = 6e-40, Method: Compositional matrix adjust. Identities = 79/170 (46%), Positives = 122/170 (71%), Gaps = 1/170 (0%) Query: 36 RLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIYDTMQ 95 +LL+ R I ++G+++ +A ++ QM+ L++ + + I LYINS GG + AG +I+D ++ Sbjct: 26 KLLESRSIIISGEIDQALAEKVITQMILLQSVSNDP-IKLYINSQGGHVEAGDTIHDFIK 84 Query: 96 FIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHARE 155 FI+PDV I G AS G + A K R+ LPN+R MIHQPLGG +GQATDIEI ARE Sbjct: 85 FIRPDVHVIGTGWVASAGITIFLAAKKEHRYALPNTRFMIHQPLGGVRGQATDIEIEARE 144 Query: 156 ILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEAVEYGLVDSILTH 205 I+++ R+N+L+A TGQ LE++++DT+R+ ++S EA++YG+V I+TH Sbjct: 145 IIRMLERVNKLIADATGQPLEKVKKDTDRNFWMSPGEALDYGIVGKIITH 194 >UniRef50_Q8LB10 ATP-dependent Clp protease proteolytic subunit-related protein 4, chloroplastic n=12 Tax=Viridiplantae RepID=CLPR4_ARATH Length = 305 Score = 165 bits (417), Expect = 1e-39, Method: Compositional matrix adjust. Identities = 88/209 (42%), Positives = 128/209 (61%), Gaps = 14/209 (6%) Query: 9 NFA---PHMALVPMVI---EQTSRGERSFDIYSRLLKERVIFLTGQVEDHMANLIVAQML 62 NF+ P +V MVI + ++ + D+ S L K R+++L + + LI+A+ L Sbjct: 76 NFSSSKPKRGVVTMVIPFSKGSAHEQPPPDLASYLFKNRIVYLGMSLVPSVTELILAEFL 135 Query: 63 FLEAENPEKDIYLYINSPG--------GVITAGMSIYDTMQFIKPDVSTICMGQAASMGA 114 +L+ E+ EK IYLYINS G G T +IYD M ++KP + T+C+G A A Sbjct: 136 YLQYEDEEKPIYLYINSTGTTKNGEKLGYDTEAFAIYDVMGYVKPPIFTLCVGNAWGEAA 195 Query: 115 FLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREILKVKGRMNELMALHTGQS 174 LLTAGAKG R LP+S +MI QP+ +QGQATD+EI +EI +K M +L + H G+S Sbjct: 196 LLLTAGAKGNRSALPSSTIMIKQPIARFQGQATDVEIARKEIKHIKTEMVKLYSKHIGKS 255 Query: 175 LEQIERDTERDRFLSAPEAVEYGLVDSIL 203 EQIE D +R ++ S EAVEYG++D ++ Sbjct: 256 PEQIEADMKRPKYFSPTEAVEYGIIDKVV 284 >UniRef50_B5A4F2 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Gymnochlora stellata RepID=B5A4F2_GYMST Length = 240 Score = 164 bits (415), Expect = 2e-39, Method: Compositional matrix adjust. Identities = 72/171 (42%), Positives = 114/171 (66%) Query: 37 LLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIYDTMQF 96 L K R+IF TG++ D ++N IV +++ + + + I INSPGG I++G++IYD + Sbjct: 39 LKKNRIIFCTGEINDLVSNTIVNHLVYFSSLSDKDAIKFIINSPGGNISSGLAIYDAITI 98 Query: 97 IKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREI 156 K ++T +G +AS+G FLL G+ +RF PNSR+MIHQP GG QG DIEI +E+ Sbjct: 99 SKLTLNTYSIGISASIGCFLLCIGSPNRRFSFPNSRIMIHQPFGGIQGTPIDIEIQTKEL 158 Query: 157 LKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEAVEYGLVDSILTHRN 207 + + +N L+A HT S+E+IE+DT+ +++ + EA+ YG++D IL +N Sbjct: 159 IIQRSNLNYLIACHTNNSIEKIEKDTDFEKYFTPHEALRYGIIDKILIKKN 209 >UniRef50_C7JE62 ATP-dependent Clp protease proteolytic subunit n=9 Tax=Proteobacteria RepID=C7JE62_ACEP3 Length = 226 Score = 161 bits (407), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 75/195 (38%), Positives = 127/195 (65%), Gaps = 3/195 (1%) Query: 12 PHMALVPMVIEQTSRGERSFDIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEK 71 P P E+ + G ++ +L K+R + + G ++D +A + ++L L E+ ++ Sbjct: 27 PETPAAPEKAEEKTAGAPHGELEHKLFKQRKVLIFGGIDDKIARDVTGRLLALAGES-DQ 85 Query: 72 DIYLYINSPGGVITAGMSIYDTMQFIK--PDVSTICMGQAASMGAFLLTAGAKGKRFCLP 129 I +Y+NSPGG + +G +I+D ++F+ ++ I G AS GA + AG K +RFCLP Sbjct: 86 PIDVYVNSPGGHVESGDTIHDMIRFVDSIAPINMIGTGWVASAGALIFAAGHKDRRFCLP 145 Query: 130 NSRVMIHQPLGGYQGQATDIEIHAREILKVKGRMNELMALHTGQSLEQIERDTERDRFLS 189 N+R ++HQP+GG +G ATDI+I AREI+K++ R+N + A TG S E++ +DT+R+ ++S Sbjct: 146 NTRFLLHQPMGGVRGPATDIDIEAREIIKMRERLNRIFAKETGHSYEKVAKDTDRNYWMS 205 Query: 190 APEAVEYGLVDSILT 204 A EA++YGLV I++ Sbjct: 206 AKEAIDYGLVTKIIS 220 >UniRef50_Q9SAA2 ATP-dependent Clp protease proteolytic subunit 6, chloroplastic n=9 Tax=Embryophyta RepID=CLPP6_ARATH Length = 271 Score = 161 bits (407), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 78/202 (38%), Positives = 121/202 (59%), Gaps = 6/202 (2%) Query: 8 DNFAPHMALV------PMVIEQTSRGERSFDIYSRLLKERVIFLTGQVEDHMANLIVAQM 61 DN AP ++ P V+ D+ S L + R+IF+ + +A +++Q+ Sbjct: 66 DNKAPRFGVIEAKKGNPPVMPSVMTPGGPLDLSSVLFRNRIIFIGQPINAQVAQRVISQL 125 Query: 62 LFLEAENPEKDIYLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGA 121 + L + + + DI +Y+N PGG + ++IYD M +IKP V T+ G AAS GA LL G Sbjct: 126 VTLASIDDKSDILMYLNCPGGSTYSVLAIYDCMSWIKPKVGTVAFGVAASQGALLLAGGE 185 Query: 122 KGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREILKVKGRMNELMALHTGQSLEQIERD 181 KG R+ +PN+RVMIHQP G G D+ E ++ + +++ + A TGQ LE++++ Sbjct: 186 KGMRYAMPNTRVMIHQPQTGCGGHVEDVRRQVNEAIEARQKIDRMYAAFTGQPLEKVQQY 245 Query: 182 TERDRFLSAPEAVEYGLVDSIL 203 TERDRFLSA EA+E+GL+D +L Sbjct: 246 TERDRFLSASEALEFGLIDGLL 267 >UniRef50_Q73JM9 ATP-dependent Clp protease proteolytic subunit 2 n=4 Tax=Treponema RepID=CLPP2_TREDE Length = 200 Score = 160 bits (406), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 76/171 (44%), Positives = 117/171 (68%) Query: 36 RLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIYDTMQ 95 + L R I L G++ ++ IV Q+L +E+ + K IY+YI+SPGG AG +I+D ++ Sbjct: 24 KFLNTRQIILAGEINKELSEKIVRQLLLMESLSATKPIYIYIDSPGGDADAGFAIFDMIR 83 Query: 96 FIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHARE 155 FIK V TI MG AS + +L A +K +RF +PNS +IHQPL G +G AT+IEIHA+E Sbjct: 84 FIKAPVYTIGMGLVASAASIILLAASKERRFGMPNSHYLIHQPLSGIKGVATEIEIHAKE 143 Query: 156 ILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEAVEYGLVDSILTHR 206 + K++ ++N+L+A TG +++ +DT+RD +L+A E+VEYGL+ I +R Sbjct: 144 LEKMRVKINKLIAEETGTDEKKVAKDTDRDCWLNAKESVEYGLISKIAKNR 194 >UniRef50_C1E717 ATP-dependent Clp protease proteolytic subunit n=4 Tax=Viridiplantae RepID=C1E717_9CHLO Length = 279 Score = 160 bits (404), Expect = 3e-38, Method: Compositional matrix adjust. Identities = 80/194 (41%), Positives = 126/194 (64%), Gaps = 5/194 (2%) Query: 17 VPMVIEQTSRGERSF---DIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEA-ENPEKD 72 VP V +T E S+ DI++ L +ER++++ +++ + N +VA ML+L++ E KD Sbjct: 83 VPRVPYKTPN-ENSWQWVDIWNCLYRERIVWVGQTIDEELGNQLVATMLYLDSIEKGGKD 141 Query: 73 IYLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSR 132 IYLYIN+ GG + M+I DTM +IK DV + G A +MG LL GAKGKR LPN+ Sbjct: 142 IYLYINTEGGDVVPTMAILDTMGYIKSDVGCVGFGSARAMGGMLLANGAKGKRAALPNTC 201 Query: 133 VMIHQPLGGYQGQATDIEIHAREILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPE 192 +M+H P G +G A+DI +E+LK++ ++N++++ TGQ E++ D RD L+A + Sbjct: 202 IMLHHPAGVARGSASDIHNEGKELLKIRAKINKMVSRATGQPEEKVHEDIRRDFHLTAEQ 261 Query: 193 AVEYGLVDSILTHR 206 A++YG+VD +L R Sbjct: 262 ALDYGIVDKVLYKR 275 >UniRef50_Q4UAC9 ATP-dependent Clp protease proteolytic subunit n=2 Tax=Theileria RepID=Q4UAC9_THEAN Length = 271 Score = 160 bits (404), Expect = 3e-38, Method: Compositional matrix adjust. Identities = 86/217 (39%), Positives = 130/217 (59%), Gaps = 45/217 (20%) Query: 34 YSRLL-----KERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAG- 87 Y++LL K R+IFL+G++ D ++ I++ +L + +P+ I YINSPGG +T+G Sbjct: 55 YNKLLDEFYIKNRIIFLSGELNDKVSFKIISSILRINENDPKLPIKFYINSPGGSVTSGN 114 Query: 88 -------------MSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVM 134 ++I+D ++ +K V TI +GQAASMGAFLL +G KG R+ +PNSR+M Sbjct: 115 FITQFLHTLFFLGLAIFDILRSLKMPVETISLGQAASMGAFLLASGTKGMRYAMPNSRIM 174 Query: 135 IHQPLG-------------------------GYQGQATDIEIHAREILKVKGRMNELMAL 169 IHQPLG G GQA+DIEI A EIL+++ +N ++ Sbjct: 175 IHQPLGTLRCSVTVLAPAAPIITNPPKGLYRGAHGQASDIEIQANEILQIREILNTNLSN 234 Query: 170 HTGQSLEQIERDTERDRFLSAPEAVEYGLVDSIL-TH 205 TG+S+E+IE+D RD ++ EA++YGL+D I+ TH Sbjct: 235 FTGKSVEEIEKDCSRDNYMRPSEALQYGLIDHIINTH 271 >UniRef50_O97252 ATP-dependent Clp protease proteolytic subunit n=2 Tax=Plasmodium RepID=O97252_PLAF7 Length = 370 Score = 159 bits (403), Expect = 5e-38, Method: Compositional matrix adjust. Identities = 73/172 (42%), Positives = 113/172 (65%), Gaps = 1/172 (0%) Query: 32 DIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIY 91 D+ K+R+I+LT ++ A+ +++Q+L+L+ N DI +YINSPGG I G++I Sbjct: 186 DVKLFFFKKRIIYLTDEINKKTADELISQLLYLDNIN-HNDIKIYINSPGGSINEGLAIL 244 Query: 92 DTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEI 151 D +IK D+ TI G ASM + +L +G KGKR LPN R+MIHQPLG G DIEI Sbjct: 245 DIFNYIKSDIQTISFGLVASMASVILASGKKGKRKSLPNCRIMIHQPLGNAFGHPQDIEI 304 Query: 152 HAREILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEAVEYGLVDSIL 203 +EIL +K + ++ T Q++E IE+D++RD +++A EA +YG++D ++ Sbjct: 305 QTKEILYLKKLLYHYLSSFTNQTVETIEKDSDRDYYMNALEAKQYGIIDEVI 356 >UniRef50_Q3AVC4 ATP-dependent Clp protease proteolytic subunit n=9 Tax=Cyanobacteria RepID=Q3AVC4_SYNS9 Length = 223 Score = 157 bits (398), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 79/188 (42%), Positives = 123/188 (65%), Gaps = 19/188 (10%) Query: 39 KERVIFL----------TGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPG------- 81 KER+++L Q+ + LI+AQ+LFLE ++PEK IY YINS G Sbjct: 27 KERIVYLGLPLFSDDDAKRQMGIDVTELIIAQLLFLEFDDPEKPIYFYINSTGTSWYSGD 86 Query: 82 --GVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPL 139 G T +I DT++++KP V TIC+GQA A +L+AG KG+R LP+S +++HQP Sbjct: 87 AIGFETEAFAICDTLRYVKPPVHTICIGQAMGTAAVILSAGTKGQRAALPHSSIVLHQPR 146 Query: 140 GGYQGQATDIEIHAREILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEAVEYGLV 199 G QGQATDI+I A+E+L K M E+++ +TG+++E++ ++++R +L+ EAVE+GL+ Sbjct: 147 SGAQGQATDIQIRAKEVLHNKQAMLEILSNNTGRTVEELSKNSDRMSYLTPHEAVEFGLI 206 Query: 200 DSILTHRN 207 D +L+ R Sbjct: 207 DRVLSSRK 214 >UniRef50_P36387 ATP-dependent Clp protease proteolytic subunit n=4 Tax=Pinus RepID=CLPP_PINCO Length = 205 Score = 157 bits (397), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 77/172 (44%), Positives = 110/172 (63%), Gaps = 1/172 (0%) Query: 32 DIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIY 91 D+Y+RL +ER++FL + + +AN ++ M++L AE+ K+I+ +IN PGG + G+ +Y Sbjct: 22 DLYNRLYRERLLFLAQDINNEIANQLMGLMVYLSAEDANKEIFSFINCPGGSVIPGVGLY 81 Query: 92 DTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGG-YQGQATDIE 150 MQ I PDV+TICMG AASMG+F+L G KR LP++RVMIHQP Y G A D Sbjct: 82 RMMQAIVPDVNTICMGVAASMGSFILIGGEMPKRIALPHARVMIHQPASSYYDGSAADFH 141 Query: 151 IHAREILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEAVEYGLVDSI 202 ++ + V+ + E TGQ E I+RD RD F+SA EA YG+VD + Sbjct: 142 NESKHVTLVREYITECYIERTGQPEEVIQRDLNRDVFMSATEAQAYGIVDVV 193 >UniRef50_B3L4C3 ATP-dependent Clp protease proteolytic subunit n=4 Tax=Plasmodium RepID=B3L4C3_PLAKH Length = 372 Score = 155 bits (392), Expect = 8e-37, Method: Compositional matrix adjust. Identities = 72/167 (43%), Positives = 110/167 (65%), Gaps = 1/167 (0%) Query: 37 LLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIYDTMQF 96 K+R+I+LT ++ + +++Q+L+L+ N + DI +YINSPGG I G++I D + Sbjct: 188 FFKKRIIYLTEEINKKTTDEMISQLLYLDNINHD-DIKIYINSPGGSINEGLAILDIFNY 246 Query: 97 IKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREI 156 IK D+ TI G ASM + +L +G KGKR LPN R+MIHQPLG GQ DIEI +EI Sbjct: 247 IKSDIQTISFGLVASMASVILASGKKGKRKSLPNCRIMIHQPLGNAFGQPQDIEIQTKEI 306 Query: 157 LKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEAVEYGLVDSIL 203 L +K + ++ T Q+ E IE+D++RD +++A EA YG++D ++ Sbjct: 307 LYLKKLLYNYLSTFTNQTTETIEKDSDRDHYMNALEAKRYGIIDEVI 353 >UniRef50_B4WHH0 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Synechococcus sp. PCC 7335 RepID=B4WHH0_9SYNE Length = 230 Score = 155 bits (391), Expect = 1e-36, Method: Compositional matrix adjust. Identities = 80/192 (41%), Positives = 123/192 (64%), Gaps = 19/192 (9%) Query: 32 DIYSRLLKERVIFLTG----------QVEDHMANLIVAQMLFLEAENPEKDIYLYINSPG 81 D+ S LLKER+++L Q+ + LI+AQ+L+LE ++PEK IY YINS G Sbjct: 25 DLQSLLLKERIVYLGTPLVSSDDFKRQMGVDVTKLIIAQLLYLEFDDPEKPIYFYINSTG 84 Query: 82 ---------GVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSR 132 G T +I DT+++IKP V TIC+GQA A +L++GAKG R LP++ Sbjct: 85 TSWYTGDAVGFETEAFAICDTLKYIKPPVHTICLGQAMGTAAMILSSGAKGSRASLPHAT 144 Query: 133 VMIHQPLGGYQGQATDIEIHAREILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPE 192 ++++Q G QGQATDI+I A E+L K ++++ +TGQS E++++DT+R +L+ E Sbjct: 145 IVLNQTRSGAQGQATDIQIRAEEVLANKAAQLDILSANTGQSTEKLDKDTDRMFYLTPEE 204 Query: 193 AVEYGLVDSILT 204 A +YGL+D +L+ Sbjct: 205 AKDYGLIDRVLS 216 >UniRef50_Q9L4P4 Putative ATP-dependent Clp protease proteolytic subunit-like n=29 Tax=cellular organisms RepID=CLPR_SYNE7 Length = 228 Score = 153 bits (387), Expect = 3e-36, Method: Compositional matrix adjust. Identities = 81/188 (43%), Positives = 116/188 (61%), Gaps = 19/188 (10%) Query: 39 KERVIFL----------TGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPG------- 81 KER+I+L QV + LI+AQ+L+LE +NPEK IY YINS G Sbjct: 31 KERIIYLGMPLFSSDDVKRQVGFDVTELIIAQLLYLEFDNPEKPIYFYINSTGTSWYTGD 90 Query: 82 --GVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPL 139 G T +I DTM++IKP V TIC+GQA A +L+ G G R LP++ ++++QP Sbjct: 91 AIGYETEAFAICDTMRYIKPPVHTICIGQAMGTAAMILSGGTPGNRASLPHATIVLNQPR 150 Query: 140 GGYQGQATDIEIHAREILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEAVEYGLV 199 G QGQA+DI+I A+E+L K M E+ A +TGQ +++ RDT+R +++ +AVEYGL+ Sbjct: 151 TGAQGQASDIQIRAKEVLANKRTMLEIFARNTGQDPDRLARDTDRMLYMTPAQAVEYGLI 210 Query: 200 DSILTHRN 207 D +L R Sbjct: 211 DRVLDSRK 218 >UniRef50_Q9XJ36 ATP-dependent Clp protease proteolytic subunit-related protein 2, chloroplastic n=11 Tax=Embryophyta RepID=CLPR2_ARATH Length = 279 Score = 153 bits (386), Expect = 4e-36, Method: Compositional matrix adjust. Identities = 70/172 (40%), Positives = 114/172 (66%) Query: 32 DIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIY 91 DI++ L +ERVIF+ +++ +N I+A ML+L+ + + IY+Y+N PGG +T ++IY Sbjct: 89 DIWNALYRERVIFIGQNIDEEFSNQILATMLYLDTLDDSRRIYMYLNGPGGDLTPSLAIY 148 Query: 92 DTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEI 151 DTM+ +K V T C+G A ++ FLL AG KG RF +P SR+ + P G +GQA DI+ Sbjct: 149 DTMKSLKSPVGTHCVGLAYNLAGFLLAAGEKGHRFAMPLSRIALQSPAGAARGQADDIQN 208 Query: 152 HAREILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEAVEYGLVDSIL 203 A+E+ +++ + +A +TGQ E++ +D R + +A EA+EYGL+D I+ Sbjct: 209 EAKELSRIRDYLFNELAKNTGQPAERVFKDLSRVKRFNAEEAIEYGLIDKIV 260 >UniRef50_C7Z253 ATP-dependent Clp protease proteolytic subunit n=3 Tax=Fungi/Metazoa group RepID=C7Z253_NECH7 Length = 157 Score = 152 bits (385), Expect = 6e-36, Method: Compositional matrix adjust. Identities = 73/139 (52%), Positives = 99/139 (71%), Gaps = 7/139 (5%) Query: 75 LYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVM 134 +YINSPGG +T+GM+IYDTM +IK VST+C+G AASM A LL G GKRF LP+S +M Sbjct: 1 MYINSPGGSVTSGMAIYDTMSYIKSPVSTVCVGGAASMAAILLAGGEAGKRFSLPHSSIM 60 Query: 135 IHQPLGGYQGQATDIEIHAREILKVKGRMNELMALHTGQ-------SLEQIERDTERDRF 187 IHQPLGG +GQA+DI I+A +I K++ + N +M H + ++E+I ERD++ Sbjct: 61 IHQPLGGTRGQASDILIYANQIQKIREQSNHIMQYHLNKAKGHDKYTIEEINDLMERDKY 120 Query: 188 LSAPEAVEYGLVDSILTHR 206 LS EA+E G++D ILT R Sbjct: 121 LSPDEALELGVIDEILTKR 139 >UniRef50_Q8UD57 ATP-dependent Clp protease proteolytic subunit 3 n=16 Tax=Proteobacteria RepID=CLPP3_AGRT5 Length = 201 Score = 152 bits (384), Expect = 6e-36, Method: Compositional matrix adjust. Identities = 74/173 (42%), Positives = 114/173 (65%), Gaps = 1/173 (0%) Query: 35 SRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIYDTM 94 + L K R IF+ G + +A + Q++ L A + + DI +Y+NSPGG + +G SI+D + Sbjct: 28 ANLFKSRSIFIYGGITQELAQKVCTQLVALAAAS-DDDIRVYVNSPGGHVESGDSIHDMI 86 Query: 95 QFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAR 154 +FIKP V I G AS GA + + K +R CLPN+R ++HQP GG +G A+DIEI AR Sbjct: 87 KFIKPKVYIIGTGWVASAGALIYVSVPKERRLCLPNTRFLLHQPSGGTRGMASDIEIQAR 146 Query: 155 EILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEAVEYGLVDSILTHRN 207 EI+K+ R+ ++ + TGQ+ E+I +D +RD +LSA +A +YGLV I+ ++ Sbjct: 147 EIIKMNQRLIKIFSKATGQTEEKIAKDIDRDYWLSADDAKDYGLVGKIVESQS 199 >UniRef50_B1X3L4 ATP-dependent Clp protease proteolytic subunit n=2 Tax=Paulinella chromatophora RepID=B1X3L4_PAUCH Length = 193 Score = 150 bits (380), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 75/166 (45%), Positives = 111/166 (66%), Gaps = 1/166 (0%) Query: 40 ERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIYDTMQFIKP 99 +R +F+ G ++D MAN +VA +L++ A + + I + I+S GG IT+ +IYDT+ +I Sbjct: 2 QRTLFVAGDIDDTMANDLVAALLYMNAVSTKIPICINIDSRGGSITSAFTIYDTINYISA 61 Query: 100 DVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQ-GQATDIEIHAREILK 158 V T+C+ A SM FLL AG KG+RF LPNSR+++ QP+G QA+D+ I E+ Sbjct: 62 PVKTVCLSVAESMAVFLLAAGEKGQRFALPNSRIIMEQPIGNVDYRQASDLLIETIEMGF 121 Query: 159 VKGRMNELMALHTGQSLEQIERDTERDRFLSAPEAVEYGLVDSILT 204 K R+NE MA TGQ + +IE+DT R +SA E+V+YGL+D +LT Sbjct: 122 TKRRINECMAEMTGQPMTKIEQDTSRRYHMSAAESVKYGLIDHVLT 167 >UniRef50_Q2VPX8 ATP-dependent Clp protease proteolytic subunit (Fragment) n=1 Tax=Bifidobacterium pullorum RepID=Q2VPX8_9BIFI Length = 139 Score = 150 bits (379), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 70/128 (54%), Positives = 95/128 (74%) Query: 77 INSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIH 136 INSPGG ITAGM+IYDTMQ I+PDV+T+ +G ASMG FLL++GAKGKR+ ++RV++H Sbjct: 1 INSPGGSITAGMAIYDTMQLIEPDVATVGLGMCASMGQFLLSSGAKGKRYLTSHARVLMH 60 Query: 137 QPLGGYQGQATDIEIHAREILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEAVEY 196 QP GG G TD+ I+A I+ +K + EL A TG ++E+I RD E D + +A +A+EY Sbjct: 61 QPSGGIGGTTTDVRINAELIMDMKRTLAELTAEQTGHTVEEIYRDNEYDHWFTAQQALEY 120 Query: 197 GLVDSILT 204 G VD I+T Sbjct: 121 GFVDKIVT 128 >UniRef50_B9YN00 ATP-dependent Clp protease proteolytic subunit n=3 Tax=Nostocaceae RepID=B9YN00_ANAAZ Length = 220 Score = 150 bits (379), Expect = 3e-35, Method: Compositional matrix adjust. Identities = 75/195 (38%), Positives = 123/195 (63%), Gaps = 14/195 (7%) Query: 25 SRGERSFDIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVI 84 S + I R+ +ER++FL + +AN +++ +L+L++E+ K IYLYINS G + Sbjct: 16 SNQWQWISIGQRMTQERILFLNQPLTTSLANSLISSILYLDSEDQSKPIYLYINSLGDPV 75 Query: 85 TAG--------------MSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPN 130 AG ++IYDTMQ+IK +V TIC GQA M A +L++GAKGKR LP+ Sbjct: 76 LAGRIDETAGMMSIKSCLAIYDTMQYIKSEVVTICFGQAVGMAALILSSGAKGKRVSLPH 135 Query: 131 SRVMIHQPLGGYQGQATDIEIHAREILKVKGRMNELMALHTGQSLEQIERDTERDRFLSA 190 + + + Q QGQATDI+++A E+L+ + + ++ + +TGQ ++I +D+ER +++ Sbjct: 136 ASIALTQFQVAAQGQATDIQVNAEEVLRKRAIILDIFSQNTGQPADKITKDSERIFYMTP 195 Query: 191 PEAVEYGLVDSILTH 205 EA EYGL+D +L + Sbjct: 196 LEAKEYGLIDRVLEN 210 >UniRef50_A7AQC7 ATP-dependent Clp protease proteolytic subunit n=4 Tax=Piroplasmida RepID=A7AQC7_BABBO Length = 245 Score = 148 bits (374), Expect = 9e-35, Method: Compositional matrix adjust. Identities = 74/189 (39%), Positives = 126/189 (66%), Gaps = 2/189 (1%) Query: 17 VPMVIEQTSRGERS--FDIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIY 74 VP+V + +RS DI++RL +ER++F++ +++ N+I+ +L L++++ EK I Sbjct: 51 VPLVEYKIPGTQRSEFHDIHTRLYRERILFVSQSLDESYTNMIIGTLLCLDSDSNEKPIT 110 Query: 75 LYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVM 134 LYINS GG TAG+++YDT++ +K ++TI +G ++ + LL +G G R LP+SRV+ Sbjct: 111 LYINSQGGPSTAGITLYDTIKHLKSKIATINVGFCSATASLLLASGTPGMRSALPHSRVV 170 Query: 135 IHQPLGGYQGQATDIEIHAREILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEAV 194 +HQP G +G A I A+ +L +K + +L + T Q L+ I +D ER++F+SA E++ Sbjct: 171 MHQPAGTLEGSAEQIRSQAQYMLNMKRILQKLYSQVTNQPLDNIAKDLEREQFMSAEESL 230 Query: 195 EYGLVDSIL 203 +YGLVD I+ Sbjct: 231 QYGLVDRII 239 >UniRef50_Q3LW65 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Bigelowiella natans RepID=Q3LW65_BIGNA Length = 207 Score = 147 bits (370), Expect = 3e-34, Method: Compositional matrix adjust. Identities = 71/162 (43%), Positives = 108/162 (66%) Query: 42 VIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIYDTMQFIKPDV 101 ++ L G V+D++A+LI + LF ++ + K++ L INSPGG +TAG+ I D + ++K Sbjct: 45 ILSLYGGVDDNIADLIFKKALFTKSVDNNKELTLLINSPGGSVTAGLKIMDALNYVKVRN 104 Query: 102 STICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREILKVKG 161 +T+C+ AASMGAFLL +G++ R L NSR+MIHQPLGG G + +EI A EIL K Sbjct: 105 NTVCLALAASMGAFLLASGSRNYRQALLNSRIMIHQPLGGAFGDSLGVEIQANEILYFKL 164 Query: 162 RMNELMALHTGQSLEQIERDTERDRFLSAPEAVEYGLVDSIL 203 ++ ++ + L +I DT+RD F+S+ +A YGL+D IL Sbjct: 165 VLSGYLSDFCRKPLNEILVDTDRDYFMSSKQATNYGLIDKIL 206 >UniRef50_Q6C1Y5 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Yarrowia lipolytica RepID=Q6C1Y5_YARLI Length = 263 Score = 145 bits (367), Expect = 6e-34, Method: Compositional matrix adjust. Identities = 63/135 (46%), Positives = 96/135 (71%) Query: 32 DIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIY 91 DI ++LL ER++ + G ++D MA +VAQ+L+LE ++ +K I++YINSPGG +TAG +I Sbjct: 45 DIPAKLLNERIVHVAGPIDDSMATSVVAQLLYLEHKSAQKPIHMYINSPGGAVTAGFAIL 104 Query: 92 DTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEI 151 DTM +I+ V T+C+GQAASM + LLT GA G R PNS +M H+PLGG G + +E+ Sbjct: 105 DTMNYIRSPVHTVCLGQAASMASLLLTCGAPGNRIMTPNSTIMTHEPLGGIVGSSKLVEL 164 Query: 152 HAREILKVKGRMNEL 166 H + +++ R+ +L Sbjct: 165 HTFHLQRIRTRIIQL 179 >UniRef50_Q6ME32 ATP-dependent Clp protease proteolytic subunit 1 n=15 Tax=Chlamydiales RepID=CLPP1_PARUW Length = 206 Score = 145 bits (367), Expect = 6e-34, Method: Compositional matrix adjust. Identities = 69/169 (40%), Positives = 111/169 (65%), Gaps = 2/169 (1%) Query: 37 LLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIYDTMQF 96 +L R IF++ V+ A+ I+ ++ +LE +P K I INSPGG + +G +I+D ++ Sbjct: 29 ILDSRRIFISDAVDSGSASEIIRKLWYLELTDPGKPILFVINSPGGAVDSGFAIWDQIKM 88 Query: 97 IKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPL--GGYQGQATDIEIHAR 154 I V+T+ G AASMG+ L + G+RF P+SR+MIHQPL G +GQATD+EI A+ Sbjct: 89 ITSPVTTLVTGLAASMGSILSLCASPGRRFATPHSRIMIHQPLLSGVIKGQATDLEIQAK 148 Query: 155 EILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEAVEYGLVDSIL 203 E+LK + + E+ TG++ IE+ +RD +++A EA+E+GL+D ++ Sbjct: 149 EMLKTRNGLIEIYVQATGKNFAAIEKAIDRDTWMTAQEALEFGLLDKVI 197 >UniRef50_P48254 Putative ATP-dependent Clp protease proteolytic subunit-like n=1 Tax=Cyanophora paradoxa RepID=CLPPL_CYAPA Length = 199 Score = 145 bits (367), Expect = 7e-34, Method: Compositional matrix adjust. Identities = 77/179 (43%), Positives = 107/179 (59%), Gaps = 2/179 (1%) Query: 31 FDIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSI 90 F I + LL ERVIFL + ++ + +L+LE+EN +K + YINS + Sbjct: 20 FLINNALLNERVIFLCNYEDATDESIYIGMLLYLESENSQKPVSFYINSSITFPNLCFGL 79 Query: 91 YDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPL--GGYQGQATD 148 YDT+ IK D+ TIC+G A M + +L AG KG+RF LPNSR+M+ +PL GG GQATD Sbjct: 80 YDTILQIKADIVTICLGLAGGMSSLILAAGTKGQRFALPNSRIMMQEPLIDGGVNGQATD 139 Query: 149 IEIHAREILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEAVEYGLVDSILTHRN 207 + I A+E++ K + L TGQ IE+D +R R+ SA A EYG +DS+L N Sbjct: 140 LAIEAKELMDTKEILINLYHERTGQPKPVIEKDLQRPRYFSAQAAKEYGFIDSLLMASN 198 >UniRef50_O51698 ATP-dependent Clp protease proteolytic subunit 2 n=20 Tax=Borrelia RepID=CLPP2_BORBU Length = 206 Score = 145 bits (365), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 68/163 (41%), Positives = 108/163 (66%) Query: 37 LLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIYDTMQF 96 +LK R I + G++ ++ L ++L LEA + +K I++YI+S GG I AG +I++ ++F Sbjct: 28 VLKSRSIVIAGEITKDVSRLFQEKILLLEALDFKKPIFVYIDSEGGDIDAGFAIFNMIRF 87 Query: 97 IKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREI 156 +KP V T+ +G AS A + A RF LP +R ++HQPL G++G ATDIEI+ E+ Sbjct: 88 VKPKVFTVGVGLVASAAALIFLAAKLENRFSLPFARYLLHQPLSGFKGVATDIEIYTNEL 147 Query: 157 LKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEAVEYGLV 199 KVK +N +++ TGQ + +IE+DT+RD +L + A +YGLV Sbjct: 148 NKVKKELNNIISKETGQKISKIEKDTDRDFWLDSSAAKKYGLV 190 >UniRef50_B9F8Z4 ATP-dependent Clp protease proteolytic subunit n=12 Tax=Magnoliophyta RepID=B9F8Z4_ORYSJ Length = 278 Score = 145 bits (365), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 69/196 (35%), Positives = 116/196 (59%), Gaps = 19/196 (9%) Query: 30 SFDIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMS 89 + D+ + LL R+IF+ + +A +++Q++ L A + E DI +Y+N PGG + + ++ Sbjct: 82 ALDLATVLLGNRIIFIGQYINSQVAQRVISQLVTLAAVDEEADILIYLNCPGGSLYSILA 141 Query: 90 IYDTMQF-------------------IKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPN 130 IYD M + IKP V T+C G AS A +L G KG R+ +PN Sbjct: 142 IYDCMSWYILDMSICHAETVLIGFGLIKPKVGTVCFGVVASQAAIILAGGEKGMRYAMPN 201 Query: 131 SRVMIHQPLGGYQGQATDIEIHAREILKVKGRMNELMALHTGQSLEQIERDTERDRFLSA 190 +RVMIHQP G +G ++ E + + +++++ A TGQ+L+ +++ TERDRF+S+ Sbjct: 202 ARVMIHQPQGVSEGNVEEVRRQVGETIYARDKVDKMFAAFTGQTLDMVQQWTERDRFMSS 261 Query: 191 PEAVEYGLVDSILTHR 206 EA+++GLVD++L R Sbjct: 262 SEAMDFGLVDALLETR 277 >UniRef50_A6DMN5 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Lentisphaera araneosa HTCC2155 RepID=A6DMN5_9BACT Length = 196 Score = 144 bits (364), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 66/168 (39%), Positives = 104/168 (61%) Query: 37 LLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIYDTMQF 96 +L R I + ++ ++ +++Q++ L + ++ IY+YINS GG +G +IYD +QF Sbjct: 23 MLDTRTIIIAEEISPELSRRVLSQLILLNKRSEKEPIYVYINSGGGCADSGFTIYDMLQF 82 Query: 97 IKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREI 156 K V T+C G AS + A KGK F LPNSR M+HQP G +G A+DIEI A EI Sbjct: 83 FKAPVFTVCSGMCASAAILIFLAAKKGKNFSLPNSRFMLHQPSTGVRGTASDIEITAEEI 142 Query: 157 LKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEAVEYGLVDSILT 204 K + R N+++A + LE++ +D +RD ++S EA +YG+V ++T Sbjct: 143 NKTRVRYNQIVADVCNKPLEEVSKDADRDFWMSPAEAKKYGMVSKVIT 190 >UniRef50_Q872F9 ATP-dependent Clp protease proteolytic subunit n=3 Tax=Sordariales RepID=Q872F9_NEUCR Length = 158 Score = 144 bits (364), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 69/139 (49%), Positives = 99/139 (71%), Gaps = 7/139 (5%) Query: 75 LYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVM 134 +YINSPGG +++G++IYDTM +IK VST+C+G AASM A LL G GKR+ LP+S VM Sbjct: 1 MYINSPGGEVSSGLAIYDTMTYIKSPVSTVCVGAAASMAAVLLIGGEPGKRYVLPHSTVM 60 Query: 135 IHQPLGGYQGQATDIEIHAREILKVKGRMNELMALHTGQS-------LEQIERDTERDRF 187 +HQPLGG +GQA+DI I+A +I +++ ++N+++ H ++ L I ERD++ Sbjct: 61 VHQPLGGTRGQASDILIYANQIQRIREQINKIVQSHVNKAFGYEKYDLAAISDMMERDKY 120 Query: 188 LSAPEAVEYGLVDSILTHR 206 L+A EAVE G+VD IL R Sbjct: 121 LTAEEAVELGVVDQILDRR 139 >UniRef50_UPI000196C506 hypothetical protein CATMIT_02666 n=1 Tax=Catenibacterium mitsuokai DSM 15897 RepID=UPI000196C506 Length = 178 Score = 143 bits (360), Expect = 4e-33, Method: Compositional matrix adjust. Identities = 73/171 (42%), Positives = 106/171 (61%), Gaps = 1/171 (0%) Query: 32 DIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIY 91 D S RVI++T ++ D +A I QM L A + E DI L+I SPGG +TAG++I Sbjct: 4 DCISEEFSRRVIYITDEITDSLAADICCQMNHLAAVSNE-DITLWIMSPGGSVTAGLAIL 62 Query: 92 DTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEI 151 DTM ++ D+ TI MGQAASM A + ++G KGKR+ N+ +MIHQ L G+ GQ TDI Sbjct: 63 DTMNSVECDIKTIVMGQAASMAAVIASSGTKGKRYIGTNAWMMIHQALAGFSGQTTDILR 122 Query: 152 HAREILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEAVEYGLVDSI 202 A+ I ++ + ++A + +E I +D +RD ++A A+ YGLVD I Sbjct: 123 SAQHIEEINNNLYSILARNCSAHIETIAKDCDRDYHMNARTAIVYGLVDHI 173 >UniRef50_A8IS47 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Chlamydomonas reinhardtii RepID=A8IS47_CHLRE Length = 282 Score = 140 bits (354), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 61/180 (33%), Positives = 118/180 (65%), Gaps = 2/180 (1%) Query: 26 RGERSFDIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVIT 85 R D++ ++V+F+ + + +AN ++A L+L++ + +K IY ++N PGG + Sbjct: 79 RQSEWVDLWEAYTYQKVVFIKEAITEDVANNMIALTLYLDSLD-QKRIYYWLNVPGGDVV 137 Query: 86 AGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGA-KGKRFCLPNSRVMIHQPLGGYQG 144 +++YDTMQ+++ +T+C G MG FLLTAG KG RF +P+S +M+H P G +G Sbjct: 138 PTLALYDTMQYVRSKTATVCYGLCLGMGGFLLTAGGEKGYRFAMPHSILMMHHPSGASRG 197 Query: 145 QATDIEIHAREILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEAVEYGLVDSILT 204 QA+++ I +RE+++++ ++ L + TGQ +++ R+ R++++ +A+EYG++D +LT Sbjct: 198 QASEMHIESRELVRMRDYLSLLTSNATGQPYDRVIRELSRNKWMDPKQAIEYGMIDKVLT 257 >UniRef50_B4WHH1 ATP-dependent Clp protease proteolytic subunit n=3 Tax=Cyanobacteria RepID=B4WHH1_9SYNE Length = 218 Score = 140 bits (353), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 82/193 (42%), Positives = 124/193 (64%), Gaps = 14/193 (7%) Query: 25 SRGERSFDIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPG--- 81 SR + +I++R+ +ER++FL + D +AN +V+ +L+L++E+ K IYLYINS G Sbjct: 10 SRSWQWVNIFTRMSQERILFLNSPLTDGVANSLVSALLYLDSEDQSKPIYLYINSLGDPV 69 Query: 82 ---------GVIT--AGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPN 130 G+I+ AG+++YDT+ IK +V TICMG A M A LL AGAKGKR LP+ Sbjct: 70 MSGQADESAGMISIRAGLAVYDTIAHIKSEVLTICMGTAYGMAAVLLAAGAKGKRAALPH 129 Query: 131 SRVMIHQPLGGYQGQATDIEIHAREILKVKGRMNELMALHTGQSLEQIERDTERDRFLSA 190 + + + P +GQATDI + A E+L + + +++A TGQS E+I +D ER +LS Sbjct: 130 TSIALTHPTTLTRGQATDINLEATEVLAKRKLIQQILANSTGQSAEKIAKDMERMFYLSP 189 Query: 191 PEAVEYGLVDSIL 203 EA EYGL+D ++ Sbjct: 190 TEAKEYGLIDRVI 202 >UniRef50_C7N490 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Slackia heliotrinireducens DSM 20476 RepID=C7N490_SLAHD Length = 197 Score = 140 bits (352), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 68/191 (35%), Positives = 117/191 (61%), Gaps = 4/191 (2%) Query: 15 ALVPMVIEQTSRGERSFDIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIY 74 A P +I++++RG +F I ++L +R I G ++ + + Q+ +L+ E+P +I Sbjct: 6 ADTPNIIKESNRGYDTFRIVDKMLADREIACIGPIDAAQTDSLCLQLRYLQKEDPAAEIT 65 Query: 75 LYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVM 134 ++ NSPGG + +G++IYDTM+ + V T+C+G A SM A L +G +R LP+SRVM Sbjct: 66 IFFNSPGGEVQSGLAIYDTMRAVSCPVRTVCLGMAGSMAALLFISG--DQRDMLPHSRVM 123 Query: 135 IHQPL--GGYQGQATDIEIHAREILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPE 192 IH PL GG G A +++ A +++ + E++A HTG++++++ T D + A E Sbjct: 124 IHDPLLQGGVSGSALEVKTIADNLMRTRDITAEIIAEHTGKTIDEVLETTAHDAYFEAEE 183 Query: 193 AVEYGLVDSIL 203 AV YGL D ++ Sbjct: 184 AVAYGLADRVI 194 >UniRef50_B7FZS4 ATP-dependent Clp protease proteolytic subunit n=2 Tax=Bacillariophyta RepID=B7FZS4_PHATR Length = 309 Score = 140 bits (352), Expect = 4e-32, Method: Compositional matrix adjust. Identities = 68/176 (38%), Positives = 115/176 (65%), Gaps = 4/176 (2%) Query: 32 DIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIY 91 DI + + ++R +F++ +++ AN +++ ML+L E+P+ I +Y N PG ++ +++Y Sbjct: 73 DIEAAMYRDRTLFISTFIDEETANSLISIMLYLRNESPKDPISMYFNVPGALLRPSLALY 132 Query: 92 DTMQFIKP--DVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGG--YQGQAT 147 D +Q K ++ T+ +G A MGAFL +AG KGKR +PNSR ++ + ++GQAT Sbjct: 133 DLIQQTKQKCEIETVNLGLCAGMGAFLCSAGTKGKRNAMPNSRFLLQRTGMDEVFRGQAT 192 Query: 148 DIEIHAREILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEAVEYGLVDSIL 203 DI + R + K RM E ++ TGQ LE+I++D +RD +LS+ EAV+YGL+D +L Sbjct: 193 DIALEVRNVKKWNDRMEEELSQMTGQPLERIQQDLKRDFYLSSDEAVQYGLIDRVL 248 >UniRef50_C5CQN7 ATP-dependent Clp protease proteolytic subunit n=5 Tax=Bacteria RepID=C5CQN7_VARPS Length = 198 Score = 139 bits (349), Expect = 7e-32, Method: Compositional matrix adjust. Identities = 68/172 (39%), Positives = 107/172 (62%) Query: 36 RLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIYDTMQ 95 + K R + + G + D +A + +++ L+A++ +K I + ++SPGG + +G +I+D ++ Sbjct: 23 KAFKSRTLLIFGSITDSVAADVTRRLIALDADSGDKPIDILVSSPGGHLESGDAIHDIVR 82 Query: 96 FIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHARE 155 FI V+ I G S L A + +R CLPN+R +IHQP GG GQATDI I A+E Sbjct: 83 FISAPVNMIGTGWVGSAATHLYLAVPRERRVCLPNTRFLIHQPSGGAGGQATDIAIQAQE 142 Query: 156 ILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEAVEYGLVDSILTHRN 207 I+K + R+ +A TG+ ++ + D ERDR+LSA EAVEYGLV I+ + Sbjct: 143 IIKARHRIAHEIARETGKPIDVVLADIERDRWLSAAEAVEYGLVSRIIQRKT 194 >UniRef50_D1Z6F0 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Sordaria macrospora RepID=D1Z6F0_SORMA Length = 225 Score = 137 bits (346), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 77/197 (39%), Positives = 113/197 (57%), Gaps = 40/197 (20%) Query: 17 VPMVIEQTSRGERSFDIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLY 76 +P + E TS G R+ + L G ++D + IVAQ+L+LE++NP+K I +Y Sbjct: 43 MPYITEVTSGGWRT------------LCLNGAIDDTTSAAIVAQLLWLESDNPDKPITMY 90 Query: 77 INSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIH 136 INSPGG +++G++IYDTM +IK VST+C+G AASM A LL G GKR+ LP+S VMI Sbjct: 91 INSPGGEVSSGLAIYDTMTYIKSPVSTVCVGAAASMAAVLLIGGEPGKRYALPHSTVMIQ 150 Query: 137 QPLGGYQGQATDIEIHAREILKVKGRMNELMALHTGQS-------LEQIERDTERDRFLS 189 +++ ++N+++ H +S L I ERD++L+ Sbjct: 151 ---------------------RIREQINKIVQSHINKSFGYEKYDLAAISDMMERDKYLT 189 Query: 190 APEAVEYGLVDSILTHR 206 A EAVE G+VD IL R Sbjct: 190 AEEAVELGVVDQILDRR 206 >UniRef50_B5A4F3 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Gymnochlora stellata RepID=B5A4F3_GYMST Length = 216 Score = 137 bits (346), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 67/167 (40%), Positives = 108/167 (64%) Query: 37 LLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIYDTMQF 96 +L + ++FL G+V D +A+ I+ +++L K++ L INSPGG +T+G+++YD+ Sbjct: 49 MLNKEILFLYGEVNDTIADTIIKNIIYLNNTTTTKNLTLMINSPGGSVTSGLAMYDSFNL 108 Query: 97 IKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREI 156 + + T C+ AASMGAFLL +G KGKR + R+MIHQPLGG G IE A E+ Sbjct: 109 VDMHIGTTCIALAASMGAFLLGSGYKGKRNGFNHCRIMIHQPLGGIVGSFNQIESQANEL 168 Query: 157 LKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEAVEYGLVDSIL 203 L K +N ++ + Q+ ++ RD +RD F+S+ EA +YG++D++L Sbjct: 169 LYYKLVLNSYISNFSSQAPVKVMRDCDRDYFMSSREAAKYGIIDNVL 215 >UniRef50_B3LBC6 ATP-dependent Clp protease proteolytic subunit n=7 Tax=Plasmodium RepID=B3LBC6_PLAKH Length = 1101 Score = 137 bits (346), Expect = 2e-31, Method: Composition-based stats. Identities = 77/196 (39%), Positives = 116/196 (59%), Gaps = 11/196 (5%) Query: 19 MVIEQTSRGERSFDIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYIN 78 +++ + I S LL +R+IFL+ V H++ I++Q+L+LE E+ K I+LYIN Sbjct: 56 LLLSPGEHNQHGISIPSMLLSKRIIFLSSPVYPHISEQIISQLLYLEYESKRKPIHLYIN 115 Query: 79 SPGGV----------ITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCL 128 S G + IT +SI D +++I DV T C+G+A + L ++G KG RF L Sbjct: 116 STGDLENNKIINLNGITDVISIIDVIEYISSDVYTYCLGKAYGISCILASSGKKGFRFSL 175 Query: 129 PNSRVMIHQPLGGYQ-GQATDIEIHAREILKVKGRMNELMALHTGQSLEQIERDTERDRF 187 NS ++Q QAT+IEI +EI+ K ++ E++A +TG+ IE+ ERDR+ Sbjct: 176 KNSSFCLNQSYSVIPFNQATNIEIQNKEIMNTKRKVVEIIANNTGKDKSHIEQILERDRY 235 Query: 188 LSAPEAVEYGLVDSIL 203 SAPEAVE+ LVD IL Sbjct: 236 FSAPEAVEFNLVDHIL 251 >UniRef50_B0LP85 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Lychnis abyssinica RepID=B0LP85_9CARY Length = 372 Score = 137 bits (345), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 68/176 (38%), Positives = 110/176 (62%), Gaps = 1/176 (0%) Query: 28 ERSFDIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAG 87 + D+Y L +ER +FL +++ +AN + A ML+L ++P KD+ L+INSPGG + +G Sbjct: 192 DEWMDLYECLYEERYLFLGDEIKIELANKVSALMLYLSIQDPNKDMRLFINSPGGGLISG 251 Query: 88 MSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGG-YQGQA 146 + ++D MQF++ DV TIC G AAS + +L G KR N+RVMIHQP ++ ++ Sbjct: 252 IVLFDMMQFVRADVCTICYGLAASTASLVLLGGELTKRSAFANARVMIHQPASAFFKDKS 311 Query: 147 TDIEIHAREILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEAVEYGLVDSI 202 I +RE+LK++ ++ ++ T + I D ERD F+S EA+++G+VD I Sbjct: 312 RLFAIDSRELLKLREQVTQIYIQRTKKPEWLIWEDMERDTFMSPEEALDHGIVDYI 367 >UniRef50_D1BUV7 ATP-dependent Clp protease proteolytic subunit n=4 Tax=Actinomycetales RepID=D1BUV7_XYLCX Length = 208 Score = 137 bits (345), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 71/175 (40%), Positives = 111/175 (63%), Gaps = 2/175 (1%) Query: 31 FDIYSR--LLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGM 88 FD +R L + RV+ L G ++D L+ Q++ L E+P DI L+I+SPGG + A + Sbjct: 10 FDARARRELYERRVLVLDGVLDDDNGTLLATQLVTLAVEDPVADIALWIHSPGGSVPAML 69 Query: 89 SIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATD 148 +I D ++ I DV+T+ +G AAS G FLL+AG +GKR LP++R+++HQ G G A D Sbjct: 70 AIRDLIRTIPNDVATLALGFAASAGQFLLSAGTRGKRRALPHARILLHQGSAGIGGTAVD 129 Query: 149 IEIHAREILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEAVEYGLVDSIL 203 IE+ A ++ ++ + L+A TGQ E++ D+ D + +A EA EYG VD+I+ Sbjct: 130 IELQADDLRHMRDTVLGLIAQDTGQPPERVFEDSLHDHWFTAAEAQEYGFVDTIV 184 >UniRef50_B0LP81 ATP-dependent Clp protease proteolytic subunit n=2 Tax=Eukaryota RepID=B0LP81_9MYRT Length = 408 Score = 137 bits (344), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 69/172 (40%), Positives = 103/172 (59%), Gaps = 1/172 (0%) Query: 32 DIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIY 91 D+++ L + R +FL ++ + N I + M+FL ENP+K IY ++NSPGG+ AG++I Sbjct: 22 DLFNGLFRARSVFLGQELNEEGGNDIASLMIFLALENPKKSIYFFLNSPGGLALAGLAIS 81 Query: 92 DTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQAT-DIE 150 DTM F+ PDV T+ +G ASM +FLL G GKR + R MIHQP + +A + E Sbjct: 82 DTMDFVTPDVYTLGLGLVASMASFLLACGTPGKRRASDHMRAMIHQPSSKFLNEAALNXE 141 Query: 151 IHAREILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEAVEYGLVDSI 202 RE+ ++ + + TGQ I+ D RD F+SA E+ +YGLVD + Sbjct: 142 FSRRELQSIRDIVIKTYVEKTGQDARVIKEDLRRDSFMSATESKDYGLVDDV 193 >UniRef50_D0L7Q6 ATP-dependent Clp protease proteolytic subunit n=4 Tax=Actinomycetales RepID=D0L7Q6_GORB4 Length = 231 Score = 137 bits (344), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 69/175 (39%), Positives = 107/175 (61%), Gaps = 3/175 (1%) Query: 28 ERSFDIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAG 87 E++ D L +R++ L ++D + + + AQM+ L E+P DI L+INSPGG + A Sbjct: 39 EKTID---NLRTQRILLLDTALDDEIGSELCAQMVLLSVEDPVADIALWINSPGGSVPAM 95 Query: 88 MSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQAT 147 ++I DTM+ I D+ T+ +G A S G FLL G GKRF LP+++V++HQ G G A Sbjct: 96 LAIMDTMRLIPNDIRTVNLGMAYSAGQFLLCCGTAGKRFILPHAKVLLHQGSAGIGGYAP 155 Query: 148 DIEIHAREILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEAVEYGLVDSI 202 DIE+ A ++ V+ + ++A TGQ E++ D+ RD +A EA+ YG VD + Sbjct: 156 DIELQADDLRHVRDTVLGIIAEQTGQPPERVFDDSLRDHVFTADEAIAYGFVDHL 210 >UniRef50_C1FE28 ATP-dependent Clp protease proteolytic subunit (Fragment) n=1 Tax=Micromonas sp. RCC299 RepID=C1FE28_9CHLO Length = 289 Score = 136 bits (343), Expect = 4e-31, Method: Compositional matrix adjust. Identities = 69/204 (33%), Positives = 120/204 (58%), Gaps = 8/204 (3%) Query: 7 RDNFAPHMALVPMVIEQTSRGERSFDIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEA 66 + N H++ V ++ + + D+ S + KER+++L + + LI+A++L+L+ Sbjct: 15 KSNRVLHISAVIPSLQGDASTQAPPDLPSFIFKERIVYLGMTLVPSVTELILAELLYLQY 74 Query: 67 ENPEKDIYLYINSPG--------GVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLT 118 E+ K IYLYINS G G T +IYDT++++ V T+ +G A A LL Sbjct: 75 EDKTKPIYLYINSTGTSKEGQKYGYDTEAFAIYDTIKYVNSPVHTVAVGTAWGEAAMLLA 134 Query: 119 AGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREILKVKGRMNELMALHTGQSLEQI 178 +G KG R LP++ +MI QP+ ++GQATD+EI +E+ K + EL++ + +E++ Sbjct: 135 SGEKGNRAALPSASIMIKQPIDAFRGQATDLEIQRKEMRNTKKQTLELLSKGINKPIEEL 194 Query: 179 ERDTERDRFLSAPEAVEYGLVDSI 202 E+D R ++ + EAV+YGL+D + Sbjct: 195 EKDINRPKYFNPWEAVDYGLIDKL 218 >UniRef50_Q06FP3 ATP-dependent Clp protease proteolytic subunit n=5 Tax=eudicotyledons RepID=CLPP_PELHO Length = 219 Score = 135 bits (340), Expect = 8e-31, Method: Compositional matrix adjust. Identities = 67/172 (38%), Positives = 105/172 (61%), Gaps = 1/172 (0%) Query: 32 DIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIY 91 D+Y+RL ++R +FL +E+ +AN IV M+ L E+P LYIN GG+I G+++Y Sbjct: 37 DLYNRLYRQRWLFLGKDLEEEVANNIVGLMIHLNIEDPFWTQTLYINCLGGLIIPGLALY 96 Query: 92 DTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGG-YQGQATDIE 150 DT+ F++PDV TIC+G AASM + +L G +R PN+RVMIHQP + + +D+ Sbjct: 97 DTIGFVEPDVKTICLGIAASMASVVLVGGTVTERCAFPNARVMIHQPRAKEFDDRFSDLN 156 Query: 151 IHAREILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEAVEYGLVDSI 202 + L+++ + ++ T + I D ERD F+SA EA YG++D + Sbjct: 157 LEGHLFLQLRNCVTQIYIHRTNKPAWVIIADLERDTFMSATEARTYGIIDGV 208 >UniRef50_Q06R14 ATP-dependent Clp protease proteolytic subunit n=4 Tax=Jasminum RepID=Q06R14_9LAMI Length = 261 Score = 135 bits (340), Expect = 8e-31, Method: Compositional matrix adjust. Identities = 72/182 (39%), Positives = 114/182 (62%), Gaps = 3/182 (1%) Query: 23 QTSRGERSFDIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGG 82 + + E D+Y++L + ++FL ++E +AN I+A ML+L ++P + +Y +INSPGG Sbjct: 48 KAEKEEVWTDLYTKLYQLGILFLGEEIEFVVANEIIAAMLYLNMQDPLQRLYFFINSPGG 107 Query: 83 VITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQP-LGG 141 + G++IYD M++I ++ TIC GQAASM + LL +GAKG R P+S VM+HQP L Sbjct: 108 AVHDGLAIYDAMKYIDQEIHTICYGQAASMASVLLASGAKGHRGAYPHSMVMMHQPALAP 167 Query: 142 YQGQATDIEIHAREILKV-KGRMNELMALHTGQSLEQIERDTERDRFLSAPEAVEYGLVD 200 +G+ + + R L + K R+ ++ T + IER ERD ++S EA EYG++D Sbjct: 168 TRGRLQRL-VRERNCLNILKERIIDIYVCETRKDRLVIERTLERDHYMSPIEAREYGIID 226 Query: 201 SI 202 I Sbjct: 227 KI 228 >UniRef50_Q01F73 ATP-dependent Clp protease proteolytic subunit (Fragment) n=1 Tax=Ostreococcus tauri RepID=Q01F73_OSTTA Length = 244 Score = 135 bits (339), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 66/180 (36%), Positives = 112/180 (62%), Gaps = 8/180 (4%) Query: 32 DIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPG--------GV 83 D+ S + +ER+++L + + LI+A++L+L+ E+ +K I LYINS G G Sbjct: 65 DLPSFIFQERIVYLGMTLVPSVTELILAELLYLQYEDKKKPIQLYINSTGSSKDGKKYGY 124 Query: 84 ITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQ 143 + +IYDT+Q++ P V TI +G A A LL +G+KG+R LP++ +M+ QPL ++ Sbjct: 125 DSEAFAIYDTIQYVSPPVHTIAVGTAWGEAAMLLASGSKGQRAALPSASIMLKQPLSSFR 184 Query: 144 GQATDIEIHAREILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEAVEYGLVDSIL 203 GQA+++EI +E+ K +M +++A TG+ + IE D R + EA++YGL+D +L Sbjct: 185 GQASELEIQRQEMRNTKKQMLDILAKTTGRDIATIETDINRPLYFEPSEAIKYGLIDKVL 244 >UniRef50_C5XH66 ATP-dependent Clp protease proteolytic subunit n=11 Tax=Magnoliophyta RepID=C5XH66_SORBI Length = 291 Score = 135 bits (339), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 78/198 (39%), Positives = 124/198 (62%), Gaps = 8/198 (4%) Query: 14 MALVPMVIEQTSRGERSFDIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDI 73 +A+V + T+ + D+ S L K R+++L + + L++A+ L+L+ ++ EK I Sbjct: 73 VAMVVPFLRGTAWEQPPPDLASFLYKNRIVYLGMCLVPSVTELMLAEFLYLQYDDAEKPI 132 Query: 74 YLYINSPG--------GVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKR 125 YLYINS G G T +++YD M+++K + T+C+G A A LL AGAKG R Sbjct: 133 YLYINSTGTTKNGEKLGYETEALAVYDAMRYVKVPIFTLCVGNAWGEAALLLAAGAKGNR 192 Query: 126 FCLPNSRVMIHQPLGGYQGQATDIEIHAREILKVKGRMNELMALHTGQSLEQIERDTERD 185 LP+S +MI QP+G +QGQATD++I +EI VK M +L+A H G+ +E+I RD R Sbjct: 193 AALPSSTIMIKQPIGRFQGQATDVDIARKEIRNVKIEMVKLLARHIGKPIEEIARDIRRP 252 Query: 186 RFLSAPEAVEYGLVDSIL 203 ++ S EAV+YG++D ++ Sbjct: 253 KYFSPSEAVDYGIIDKVI 270 >UniRef50_A9I409 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Bordetella petrii DSM 12804 RepID=A9I409_BORPD Length = 217 Score = 134 bits (338), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 65/181 (35%), Positives = 110/181 (60%), Gaps = 1/181 (0%) Query: 27 GERSFDIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITA 86 G+ S + + + R + + G + D +A+ V ++L L+AE+ + I + ++SPGG + + Sbjct: 33 GQNSAFLEEKTFRTRTVLVFGTITDAVASETVRRLLTLDAES-DAPIDMIVSSPGGHLES 91 Query: 87 GMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQA 146 G +I+D +FI V+ I G S L + +RFCLP +R +IHQP GG G A Sbjct: 92 GDAIHDVARFISAPVNMIGTGWVGSAATHLYLGAPRERRFCLPQTRFLIHQPSGGAGGPA 151 Query: 147 TDIEIHAREILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEAVEYGLVDSILTHR 206 +D+ IHA+EI++ + R+ +++A TGQ +E++ +D ERD ++SA EA+ YGL I+ R Sbjct: 152 SDMAIHAKEIIRARERIAQVIARETGQPIERVRQDIERDLWMSAEEAIAYGLASRIIERR 211 Query: 207 N 207 Sbjct: 212 G 212 >UniRef50_A8INX1 ATP-dependent Clp protease proteolytic subunit n=2 Tax=Chlamydomonadales RepID=A8INX1_CHLRE Length = 283 Score = 133 bits (335), Expect = 4e-30, Method: Compositional matrix adjust. Identities = 74/193 (38%), Positives = 111/193 (57%), Gaps = 22/193 (11%) Query: 23 QTSRGERSF--DIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSP 80 Q GE + D+Y LL R+IF+ G + D MA IV ++ LEA + +DI +YINSP Sbjct: 65 QIGHGEDAIEMDLYRYLLSNRIIFIGGYINDKMATQIVGSLMALEAVDENEDIRIYINSP 124 Query: 81 GGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLG 140 GG + + + D MQ IKPDV T+ +G S + ++ AG KGKR+ + N+R+M+ QP+G Sbjct: 125 GGQPYSVLGVVDAMQSIKPDVQTVALGACYSYASLVVAAGTKGKRYAMKNTRLMMTQPMG 184 Query: 141 GYQGQATDIEIHAREILKVKGRMNELMALH----------TGQSLEQIERDTERDRFLSA 190 G QG +I ++K + EL AL+ TG + +QIE+ T RD F++ Sbjct: 185 GSQG----------DIYQIKATVEELNALYQIFSRYYMKFTGMNQDQIEQATCRDHFMTP 234 Query: 191 PEAVEYGLVDSIL 203 +A GL+D I+ Sbjct: 235 EQAKLEGLIDEII 247 >UniRef50_Q2WGG1 ATP-dependent Clp protease proteolytic subunit (Fragment) n=2 Tax=Tracheophyta RepID=Q2WGG1_SELUN Length = 206 Score = 133 bits (335), Expect = 4e-30, Method: Compositional matrix adjust. Identities = 70/175 (40%), Positives = 103/175 (58%), Gaps = 1/175 (0%) Query: 31 FDIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSI 90 D ++R +ER+ ++D AN + EN +D + Y N PGG ++AG+S+ Sbjct: 21 IDTHNRPYRERLPSSGQHMDDETANQPIRITTHPNGENRSQDTHSYTNPPGGAVSAGISV 80 Query: 91 YDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGG-YQGQATDI 149 YDTMQ PDV TI +G AASMG + T G +R LP++RVMIHQP Y+GQA + Sbjct: 81 YDTMQSAVPDVHTIRVGLAASMGPSISTGGEITRRMALPHARVMIHQPASSFYEGQAGER 140 Query: 150 EIHAREILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEAVEYGLVDSILT 204 + A EILK++ + ++ A TG+ L + +D ERD F A EA +G+ D ++T Sbjct: 141 LMEAEEILKLRDCITKIHARKTGKPLWVVSKDMERDVFTPAREARVHGITDPVVT 195 >UniRef50_C8VJ02 ATP-dependent Clp protease proteolytic subunit n=8 Tax=Leotiomyceta RepID=C8VJ02_EMENI Length = 135 Score = 132 bits (332), Expect = 8e-30, Method: Compositional matrix adjust. Identities = 66/117 (56%), Positives = 87/117 (74%), Gaps = 4/117 (3%) Query: 94 MQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHA 153 M +I VSTIC+GQAASMG+ LL G G+R+CLP+S +MIHQP GGY GQATDI IHA Sbjct: 1 MTYIASPVSTICVGQAASMGSLLLCGGQAGQRYCLPHSSIMIHQPSGGYFGQATDIAIHA 60 Query: 154 REILKVKGRMNELMALH-TGQ---SLEQIERDTERDRFLSAPEAVEYGLVDSILTHR 206 +EIL+V+ ++N++ H TG+ SL++IE+ ERD F+ A EA+E G+VD IL R Sbjct: 61 KEILRVRHQLNQIYKRHLTGKKELSLDEIEKLMERDYFMGAREALELGIVDEILDRR 117 >UniRef50_Q50DZ1 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Clostridium hathewayi RepID=Q50DZ1_9CLOT Length = 139 Score = 128 bits (322), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 63/104 (60%), Positives = 82/104 (78%), Gaps = 2/104 (1%) Query: 14 MALVPMVIEQTSRGERSFDIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDI 73 M+LVP VIE TS+GERS+D++SRLLK+R+IFL +V D A L VAQMLFLEAE+P KDI Sbjct: 1 MSLVPNVIETTSKGERSYDLFSRLLKDRIIFLGEEVNDETARLAVAQMLFLEAEDPSKDI 60 Query: 74 YLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLL 117 YINSPGG ITAG++IYDTM++I+ V+ + +AA++ LL Sbjct: 61 SFYINSPGGSITAGLAIYDTMRYIR--VTYRHLYRAAAVSRILL 102 >UniRef50_Q5Z0M5 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Nocardia farcinica RepID=Q5Z0M5_NOCFA Length = 201 Score = 127 bits (320), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 69/168 (41%), Positives = 107/168 (63%) Query: 36 RLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIYDTMQ 95 +LL R++ L G ++D L+ Q+L L AEN E I L+I+SPGG + A ++I D M+ Sbjct: 17 QLLSRRILVLDGPLDDDNGTLLATQLLTLAAENDEAPISLWIHSPGGSVPAMLAIRDVMR 76 Query: 96 FIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHARE 155 + +VST+ +G A S G FLL+AG++GKRF LP++RV++HQ G G A D+E+ A + Sbjct: 77 LVPCEVSTLALGLACSAGQFLLSAGSRGKRFALPHARVLMHQGSAGIGGTAVDVEVQADD 136 Query: 156 ILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEAVEYGLVDSIL 203 + + L+A TGQ ++I D+ DR+ +A +A EYG +D I+ Sbjct: 137 LRHTVETVLGLIAADTGQPYDRIYEDSLHDRWFTAAQAKEYGFIDHIV 184 >UniRef50_A5BHP1 ATP-dependent Clp protease proteolytic subunit n=5 Tax=core eudicotyledons RepID=A5BHP1_VITVI Length = 429 Score = 127 bits (319), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 58/94 (61%), Positives = 73/94 (77%) Query: 110 ASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREILKVKGRMNELMAL 169 SMGAFLL+ G KGKR+ LPNSR+MIHQPLGG QG TDI+I A E+L K +N ++ Sbjct: 320 GSMGAFLLSCGTKGKRYSLPNSRIMIHQPLGGAQGGQTDIDIQANEMLHHKANLNGYLSY 379 Query: 170 HTGQSLEQIERDTERDRFLSAPEAVEYGLVDSIL 203 HTGQSLE+I +DT+RD F+SA EA EYGL+D ++ Sbjct: 380 HTGQSLEKINQDTDRDFFMSAKEAKEYGLIDGVI 413 Score = 108 bits (269), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 47/83 (56%), Positives = 67/83 (80%) Query: 28 ERSFDIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAG 87 ER + S+L + R+I G V+D MAN+IVAQ+L+L+A +P+KDI +Y+NSPGG +TAG Sbjct: 98 ERFQSVVSQLFQHRIIRCGGAVDDDMANIIVAQLLYLDAVDPDKDIVMYVNSPGGSVTAG 157 Query: 88 MSIYDTMQFIKPDVSTICMGQAA 110 M+I+DTM+ I+PDVST+C+G AA Sbjct: 158 MAIFDTMRHIRPDVSTVCVGLAA 180 >UniRef50_Q9MTJ8 ATP-dependent Clp protease proteolytic subunit n=7 Tax=Oenothera RepID=CLPP_OENEH Length = 249 Score = 127 bits (319), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 66/173 (38%), Positives = 102/173 (58%), Gaps = 2/173 (1%) Query: 32 DIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIY 91 D+Y+ L + R IFL + +AN I M+FL ++ +++Y +INSPGG+ AG+ IY Sbjct: 28 DLYNVLYRTRSIFLGDAIHFEVANHIAGLMIFLTIQDATQNLYFFINSPGGLAVAGLLIY 87 Query: 92 DTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGY--QGQATDI 149 DTMQ++ P V T+ +G ASM +FLL G KR PN RVMIHQP Y + Q+ ++ Sbjct: 88 DTMQYVTPPVYTLGLGVLASMASFLLVGGETSKRLMGPNGRVMIHQPESDYTHKDQSLEV 147 Query: 150 EIHAREILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEAVEYGLVDSI 202 ++ + E+ ++ + + T E + ER+ F++A EA YG+VD I Sbjct: 148 QLDSGEVEDIRKMVIRVYLERTRLPREVLNDHLERNYFMTATEAKYYGIVDDI 200 >UniRef50_Q8L770 ATP-dependent Clp protease proteolytic subunit-related protein 3, chloroplastic n=17 Tax=Viridiplantae RepID=CLPR3_ARATH Length = 330 Score = 127 bits (318), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 64/183 (34%), Positives = 112/183 (61%), Gaps = 11/183 (6%) Query: 32 DIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPG---------G 82 D+ S LL R++++ + + L+VA++++L+ +P++ IY+YINS G G Sbjct: 121 DLPSMLLDGRIVYIGMPLVPAVTELVVAELMYLQWLDPKEPIYIYINSTGTTRDDGETVG 180 Query: 83 VITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGY 142 + + G +IYD++ +K +V T+C+G A LL+AG KGKRF +P+++ MI QP Sbjct: 181 MESEGFAIYDSLMQLKNEVHTVCVGAAIGQACLLLSAGTKGKRFMMPHAKAMIQQPRVPS 240 Query: 143 QG--QATDIEIHAREILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEAVEYGLVD 200 G A+D+ I A+E++ + + EL++ HTG S+E + R ++ AP+A E+G++D Sbjct: 241 SGLMPASDVLIRAKEVITNRDILVELLSKHTGNSVETVANVMRRPYYMDAPKAKEFGVID 300 Query: 201 SIL 203 IL Sbjct: 301 RIL 303 >UniRef50_Q06SH9 ATP-dependent Clp protease proteolytic subunit n=2 Tax=Chlorophyceae RepID=Q06SH9_STIHE Length = 518 Score = 125 bits (315), Expect = 7e-28, Method: Compositional matrix adjust. Identities = 56/150 (37%), Positives = 98/150 (65%), Gaps = 3/150 (2%) Query: 61 MLFLEAE---NPEKDIYLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLL 117 +LF+E + + ++++INS GG +++G++IYD +QF+K T+C+G A S + +L Sbjct: 324 LLFMETQERLQEQSRVFVFINSTGGSVSSGITIYDALQFVKTGAVTVCLGMAFSASSMVL 383 Query: 118 TAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREILKVKGRMNELMALHTGQSLEQ 177 G G R+ + VMIHQP GG GQA+D+ + A EIL+++ ++ + +L + ++L + Sbjct: 384 AGGNIGHRYVAEGAHVMIHQPEGGITGQASDVLLDAYEILRIRRQVATIYSLCSKRALSE 443 Query: 178 IERDTERDRFLSAPEAVEYGLVDSILTHRN 207 + +D +RD F++ EAV+YGL D I+T N Sbjct: 444 VLKDLDRDNFMTPQEAVDYGLADEIVTRYN 473 >UniRef50_B2X1V4 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Oedogonium cardiacum RepID=B2X1V4_OEDCA Length = 560 Score = 124 bits (312), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 60/171 (35%), Positives = 101/171 (59%), Gaps = 2/171 (1%) Query: 37 LLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIYDTMQF 96 +LK I + + +LI A+ E +K ++++INS GG + +G+++YD +QF Sbjct: 347 MLKTSTILEKKRKREEAEDLIFAESQ--ERMQEQKRVFVFINSTGGSVHSGITVYDALQF 404 Query: 97 IKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREI 156 +K T+C+G A S + +L G G R+ VMIHQP GG QGQA+D+ + E+ Sbjct: 405 VKAGTVTVCLGTAFSASSLVLAGGNIGHRYVSEGGHVMIHQPEGGIQGQASDVVVDTHEL 464 Query: 157 LKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEAVEYGLVDSILTHRN 207 ++V+ + + AL + +S +I +D +RD F++ EA++YGL D I+T N Sbjct: 465 MRVRRQAATIYALCSKRSFHEILKDLDRDYFMTPQEAIDYGLADEIVTRYN 515 >UniRef50_Q2VPY9 ATP-dependent Clp protease proteolytic subunit (Fragment) n=1 Tax=Bifidobacterium pullorum RepID=Q2VPY9_9BIFI Length = 161 Score = 121 bits (304), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 72/134 (53%), Positives = 98/134 (73%), Gaps = 2/134 (1%) Query: 4 SGERD-NFAPH-MALVPMVIEQTSRGERSFDIYSRLLKERVIFLTGQVEDHMANLIVAQM 61 S RD FAP ++P E+T G + D Y+RL ++R+IF+ QV+D A+ I+AQ+ Sbjct: 27 SSVRDARFAPQDRYILPQFEEKTPYGYKRQDPYTRLFEDRIIFMGVQVDDAAADDIMAQL 86 Query: 62 LFLEAENPEKDIYLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGA 121 L LE+++P +D+ +YINSPGG +TA +IYDTMQ+IKPDV T+C+GQAAS A LL AGA Sbjct: 87 LVLESQDPNRDVMMYINSPGGSMTAMTAIYDTMQYIKPDVQTVCLGQAASAAAILLAAGA 146 Query: 122 KGKRFCLPNSRVMI 135 KGKR LPN+RV+I Sbjct: 147 KGKRLILPNARVLI 160 >UniRef50_B1X3L5 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Paulinella chromatophora RepID=B1X3L5_PAUCH Length = 219 Score = 117 bits (293), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 68/197 (34%), Positives = 107/197 (54%), Gaps = 22/197 (11%) Query: 28 ERSFDIYSRLLKERVIFLTGQVED------------HMANLIVAQMLFLEAENPEKDIYL 75 E D+ S LL ER+I+L + ++ L++AQ+L LE E+ I + Sbjct: 21 ESMSDLASILLSERIIYLGMALASDDETRQSFSLGMNVTQLMIAQLLCLEFESNSA-ITI 79 Query: 76 YINSPG---------GVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRF 126 YINS G G T +IYDT++FI+ V T C+G A LL GA G R Sbjct: 80 YINSTGSTDINSNAIGHETEAFAIYDTIRFIESPVHTFCVGVAMGTATMLLACGASGCRA 139 Query: 127 CLPNSRVMIHQPLGGYQGQATDIEIHAREILKVKGRMNELMALHTGQSLEQIERDTERDR 186 LPN+ ++++QP G +TDI I ++L + M+E++++H G+SL+QI D R Sbjct: 140 SLPNASIILNQPYNYVGGSSTDINIQVEQLLLSRSIMHEILSIHIGKSLQQIRSDCNRIH 199 Query: 187 FLSAPEAVEYGLVDSIL 203 L+A +A+ YG++D ++ Sbjct: 200 HLTAYQALHYGIIDDVI 216 >UniRef50_A4S2U0 ATP-dependent Clp protease proteolytic subunit n=2 Tax=Mamiellales RepID=A4S2U0_OSTLU Length = 210 Score = 117 bits (292), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 57/187 (30%), Positives = 111/187 (59%), Gaps = 2/187 (1%) Query: 17 VPMVIEQTSRGERSFDIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLY 76 VP+++ G D++ L ++R++FL ++++ +A A++L LE+E+PE +I ++ Sbjct: 26 VPVMVPDGRGGGE--DVFGALARDRIVFLGTRIDEQVAAETCARLLQLESEDPEGEIRVW 83 Query: 77 INSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIH 136 +N G +I DTM+++ VST+ +G A L+ AG KGKR+ + ++R+++ Sbjct: 84 VNCVAGTQYCVTAILDTMEYVSCPVSTVALGCVAGPPVMLVAAGDKGKRYGMSSARIVLS 143 Query: 137 QPLGGYQGQATDIEIHAREILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEAVEY 196 QPLGG G + +++I A E+ + +A +TG+ +++E RD ++ EA+++ Sbjct: 144 QPLGGLAGTSIEVKIQATELNRNAKAQVGFIAKYTGRDADELEAMMARDTYMGVDEAIDF 203 Query: 197 GLVDSIL 203 GL+D L Sbjct: 204 GLIDHAL 210 >UniRef50_Q9XJ35 ATP-dependent Clp protease proteolytic subunit-related protein 1, chloroplastic n=4 Tax=Embryophyta RepID=CLPR1_ARATH Length = 387 Score = 114 bits (286), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 69/181 (38%), Positives = 98/181 (54%), Gaps = 10/181 (5%) Query: 32 DIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPG---------G 82 D+ S LL R+ +L + + L+VAQ ++L+ +NP K IYLYINSPG G Sbjct: 171 DLPSLLLDARICYLGMPIVPAVTELLVAQFMWLDYDNPTKPIYLYINSPGTQNEKMETVG 230 Query: 83 VITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQP-LGG 141 T +I DT+ + K DV TI G A A LL+ G KG R P+S ++ P + Sbjct: 231 SETEAYAIADTISYCKSDVYTINCGMAFGQAAMLLSLGKKGYRAVQPHSSTKLYLPKVNR 290 Query: 142 YQGQATDIEIHAREILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEAVEYGLVDS 201 G A D+ I A+E+ EL+A TG+S EQI D +R ++L A A++YG+ D Sbjct: 291 SSGAAIDMWIKAKELDANTEYYIELLAKGTGKSKEQINEDIKRPKYLQAQAAIDYGIADK 350 Query: 202 I 202 I Sbjct: 351 I 351 >UniRef50_B0LNX5 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Silene fruticosa RepID=B0LNX5_9CARY Length = 397 Score = 114 bits (285), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 61/172 (35%), Positives = 107/172 (62%), Gaps = 1/172 (0%) Query: 32 DIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIY 91 ++Y+ +R++FL ++++ +AN ++ +++L E+ +DI+L+INSPGG + AG+ +Y Sbjct: 218 ELYTLTYHKRLLFLCDKLKNELANKLINLLIYLSTEDTTEDIFLFINSPGGFLGAGLGLY 277 Query: 92 DTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEI 151 +T+QF+ P VSTI +G A S+ AF+L GA KR P + VM+HQP T I + Sbjct: 278 NTIQFVPPQVSTIALGIAGSISAFVLVGGALSKRVAYPCAXVMMHQPASTKHKNKTRICV 337 Query: 152 -HAREILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEAVEYGLVDSI 202 + ++L ++ + + TG++ + I D ER F+SA EA +G+VD + Sbjct: 338 MESFDLLTIRDMITNVYIQRTGKTKQVIYEDMERPFFMSATEAQVHGIVDHV 389 >UniRef50_B0LN89 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Lychnis chalcedonica RepID=B0LN89_LYCCH Length = 222 Score = 114 bits (285), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 62/173 (35%), Positives = 98/173 (56%), Gaps = 1/173 (0%) Query: 31 FDIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSI 90 D Y L K R++FL + N I +LFL E+ +K +L+I+S GG+ T M+I Sbjct: 26 LDFYHELHKRRLLFLCQDFNYEIVNQIAGLLLFLHLEDEDKQQHLFIHSRGGLATHAMAI 85 Query: 91 YDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLG-GYQGQATDI 149 YDTMQ + V TI MG ASM LL GA KR ++R+M+H P ++G A+++ Sbjct: 86 YDTMQLVTLGVHTIGMGVVASMATLLLAGGAYTKRNAYAHTRIMLHLPATRPFKGTASEV 145 Query: 150 EIHAREILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEAVEYGLVDSI 202 ++E+L++ + E++ TG+ + I +D ++ SA EA YG++D I Sbjct: 146 LGESKEVLRLTQTLVEILEERTGRPQDLIYKDMQKTTHFSAEEAQAYGIIDEI 198 >UniRef50_Q011H7 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Ostreococcus tauri RepID=Q011H7_OSTTA Length = 174 Score = 113 bits (283), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 54/172 (31%), Positives = 104/172 (60%) Query: 32 DIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIY 91 D++ L ER++FL ++++++A A++L LEAE+PE +I +++N G +I Sbjct: 3 DVFGALASERIVFLGQRIDENVALDACARLLALEAEDPEGEIRIWVNCVAGTQYCVTAIL 62 Query: 92 DTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEI 151 D M+++ +ST+ +G A L+ AG KGKR+ ++R+++ QPLGG G + +++I Sbjct: 63 DMMEYVSCPISTVALGCVAGPPVMLVAAGDKGKRYGTQSARMVLSQPLGGLAGTSIEVKI 122 Query: 152 HAREILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEAVEYGLVDSIL 203 A+E+ + +A +TG+ +++E RD ++ EA+++GL+D L Sbjct: 123 QAKELNRNAKAQVGFIARYTGKDADELEAMMARDTYMGVQEAIDFGLLDHAL 174 >UniRef50_A4RSQ9 ATP-dependent Clp protease proteolytic subunit n=6 Tax=cellular organisms RepID=A4RSQ9_OSTLU Length = 308 Score = 112 bits (279), Expect = 9e-24, Method: Compositional matrix adjust. Identities = 57/174 (32%), Positives = 104/174 (59%), Gaps = 11/174 (6%) Query: 41 RVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPG---------GVITAGMSIY 91 R++++ + + LIV+++L+L+ + +K Y+YINS G G T +I+ Sbjct: 108 RIVYIGMPLVPAVTELIVSELLYLQYTDQKKPCYIYINSTGCTRADGEVVGFETEATAIF 167 Query: 92 DTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQG--QATDI 149 DTM++I ++ T+ G A LL+AG KGKR+ P++ M+HQP G QAT++ Sbjct: 168 DTMKYIGNEIYTVGTGVAIGQACMLLSAGDKGKRYMTPHATAMLHQPRVPSTGERQATEL 227 Query: 150 EIHAREILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEAVEYGLVDSIL 203 I RE L K + ++++ TG S+ ++++D +R +++A +A+EYG+VD ++ Sbjct: 228 NIKWRETLAQKKSLLDILSQTTGHSVAKLDKDMQRPLYMTAKDAIEYGIVDKVI 281 >UniRef50_B9HMY7 ATP-dependent Clp protease proteolytic subunit n=7 Tax=Spermatophyta RepID=B9HMY7_POPTR Length = 391 Score = 110 bits (276), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 65/186 (34%), Positives = 100/186 (53%), Gaps = 10/186 (5%) Query: 32 DIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPG---------G 82 D+ S LL R+ +L + + L+VAQ ++L+ E+P K IYLYINS G G Sbjct: 173 DLPSLLLDARICYLGMPIVPAVTELLVAQFMYLDYEDPSKPIYLYINSSGTQNEKMETVG 232 Query: 83 VITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQP-LGG 141 T +I D M + K + T+ G A A LL+ GAKG R PNS ++ P + Sbjct: 233 SETEAYAIADIMSYCKSTIYTVNCGMAYGQAAMLLSLGAKGYRALQPNSSTKLYLPKVNR 292 Query: 142 YQGQATDIEIHAREILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEAVEYGLVDS 201 G A D+ I A+E+ EL+A TG+ E++ +D +R ++L A EA++YG+ D Sbjct: 293 SSGAAVDMWIKAKELDANTEYYIELLAKGTGKPKEELVKDIQRPKYLKAQEAIDYGIADK 352 Query: 202 ILTHRN 207 +L+ + Sbjct: 353 LLSSND 358 >UniRef50_B0LP79 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Oenothera fruticosa RepID=B0LP79_OENFR Length = 295 Score = 110 bits (275), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 64/177 (36%), Positives = 105/177 (59%), Gaps = 1/177 (0%) Query: 31 FDIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSI 90 D+++ L ++R++FL +++ + N IV M++L +NP D+ +INSPGG+ G I Sbjct: 21 LDLFNILYRKRILFLGQEIDVELGNHIVGLMVYLGIDNPFLDMIFFINSPGGLAIPGFGI 80 Query: 91 YDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIE 150 YD MQ+IKP+V TI +G ASM + +L+ G KGKR N R+MIHQP Y+ Sbjct: 81 YDIMQYIKPNVYTIGLGVVASMASLILSGGGKGKRIGGKNMRIMIHQPAMSYRKDPLRTI 140 Query: 151 IHAREILK-VKGRMNELMALHTGQSLEQIERDTERDRFLSAPEAVEYGLVDSILTHR 206 + E + ++ ++ + TG+ I + ER+ F+++ EA+ +G+VDSI R Sbjct: 141 LREAEGMSCLRTQVLKCYIKKTGKDCGVINKLLERNTFMTSTEALGFGIVDSIADGR 197 >UniRef50_C9ZCK7 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Streptomyces scabiei 87.22 RepID=C9ZCK7_STRSW Length = 165 Score = 109 bits (273), Expect = 5e-23, Method: Compositional matrix adjust. Identities = 57/127 (44%), Positives = 75/127 (59%), Gaps = 2/127 (1%) Query: 83 VITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQP--LG 140 +TA ++YDT +F+ DV T+C GQA S A L AG GKR LP +R +IHQP Sbjct: 25 TLTAMTALYDTNRFVTCDVETVCPGQAGSAAAVLPAAGTPGKRSMLPGARALIHQPAMAD 84 Query: 141 GYQGQATDIEIHAREILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEAVEYGLVD 200 +GQA D I A E+ + + M E++ HTG+S E+I D ERD FL A AV YGL D Sbjct: 85 PVEGQAGDPAIRAEELTRHRRTMEEMLVRHTGRSPERIGADIERDTFLDAEAAVAYGLAD 144 Query: 201 SILTHRN 207 ++ R Sbjct: 145 RVVQSRR 151 >UniRef50_D1ZWV1 ATP-dependent Clp protease proteolytic subunit (Fragment) n=1 Tax=Sordaria macrospora RepID=D1ZWV1_SORMA Length = 187 Score = 109 bits (272), Expect = 7e-23, Method: Compositional matrix adjust. Identities = 52/95 (54%), Positives = 66/95 (69%) Query: 112 MGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREILKVKGRMNELMALHT 171 MG+FLL AG G R L N+R+MIHQP GG QG A+DI+I A+EI ++K RMN L +T Sbjct: 1 MGSFLLAAGEPGMRVALTNARIMIHQPSGGAQGMASDIQIQAKEIQRIKDRMNALYVKYT 60 Query: 172 GQSLEQIERDTERDRFLSAPEAVEYGLVDSILTHR 206 G+ LE+IER +RD FL A EA +GLVD + R Sbjct: 61 GKPLEEIERAMDRDTFLEAEEAKAFGLVDQVFDKR 95 >UniRef50_B7C8Y7 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7C8Y7_9FIRM Length = 181 Score = 108 bits (270), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 60/163 (36%), Positives = 100/163 (61%), Gaps = 1/163 (0%) Query: 41 RVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIYDTMQFIKPD 100 R+I L G+V M+ +V ++ L A+N + I + I+SPGG + GM I D M+ I+ Sbjct: 19 RIINLWGEVTPEMSLYVVTRLQELNAKNHDP-ITIQIHSPGGSLRDGMIIIDMMEAIQSP 77 Query: 101 VSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREILKVK 160 V T+ +G A SM + +L AG KG R L +S +M+HQ +G+ +DI+ A+ +++ + Sbjct: 78 VYTMALGNAMSMASLILAAGEKGHRKALKHSTIMVHQGSTICEGKFSDIKSGAKRMVETE 137 Query: 161 GRMNELMALHTGQSLEQIERDTERDRFLSAPEAVEYGLVDSIL 203 + EL +TG++ +I D + D FLS+ +AVEYGL+D ++ Sbjct: 138 EMIEELYVKYTGKTKRKIHADLQMDLFLSSDKAVEYGLIDEVV 180 >UniRef50_A4E7Q8 ATP-dependent Clp protease proteolytic subunit n=2 Tax=Collinsella RepID=A4E7Q8_9ACTN Length = 205 Score = 107 bits (267), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 56/189 (29%), Positives = 107/189 (56%), Gaps = 4/189 (2%) Query: 18 PMVIEQTSRGERSFDIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYI 77 P+ + +++RG IY +L R + + G +E MA+ + Q+ L+A +P + I +++ Sbjct: 11 PLTMRESARGITLTSIYDEMLARRELSVMGNIETPMAHDLCQQIRLLDATDPSRPITIFV 70 Query: 78 NSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQ 137 S GG + +G++IYD M+ + T+C+ AASMGA + G + P++ +MIH Sbjct: 71 ASAGGSVRSGLAIYDAMRLASCPIRTVCLEFAASMGAVIFMGGDDCRMA--PHAELMIHD 128 Query: 138 PL--GGYQGQATDIEIHAREILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEAVE 195 PL G G A ++ +R +++ + + ++++ +G + ++I+ T +D +LSA AVE Sbjct: 129 PLIPQGAGGSALALQETSRRLMQTRKTLTQILSDRSGLTPKRIQSLTAKDTYLSAERAVE 188 Query: 196 YGLVDSILT 204 G IL+ Sbjct: 189 LGFAHEILS 197 >UniRef50_UPI000190C202 ATP-dependent Clp protease, proteolytic subunit ClpP n=2 Tax=Salmonella enterica subsp. enterica serovar Typhi RepID=UPI000190C202 Length = 87 Score = 106 bits (265), Expect = 5e-22, Method: Compositional matrix adjust. Identities = 50/51 (98%), Positives = 50/51 (98%) Query: 1 MSYSGERDNFAPHMALVPMVIEQTSRGERSFDIYSRLLKERVIFLTGQVED 51 MSYSGERDN APHMALVPMVIEQTSRGERSFDIYSRLLKERVIFLTGQVED Sbjct: 37 MSYSGERDNLAPHMALVPMVIEQTSRGERSFDIYSRLLKERVIFLTGQVED 87 >UniRef50_A8IXD6 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Chlamydomonas reinhardtii RepID=A8IXD6_CHLRE Length = 276 Score = 104 bits (259), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 63/183 (34%), Positives = 103/183 (56%), Gaps = 12/183 (6%) Query: 32 DIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPG--------GV 83 D+ +RL ER+++L ++ +A L+ AQ+ L E P+ I+ YINS G G Sbjct: 44 DLATRLFSERIMYLGMPIDSSVAELLTAQLFVLVQEAPDP-IFFYINSTGIAKSTTKFGN 102 Query: 84 ITAGMSIYDTMQFIKP--DVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGG 141 +++Y M+ ++ + T+C+G A A LL+AG+ GKR L +S +M+ QPL Sbjct: 103 EHEAIAVYSMMKGVQKYCPIYTLCVGNAFGEAALLLSAGSPGKRAALRSSTIMLRQPLQR 162 Query: 142 YQG-QATDIEIHAREILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEAVEYGLVD 200 G QA+DI+I+ + + M + +A T ++ EQI D R R+ + EAV YGL+D Sbjct: 163 LGGMQASDIDIYRKITREKTATMAKYLAACTKKTEEQIMTDFTRPRYFNPYEAVSYGLID 222 Query: 201 SIL 203 ++L Sbjct: 223 TVL 225 >UniRef50_B3Y5P7 ATP-dependent Clp protease proteolytic subunit (Fragment) n=1 Tax=Chlorophyta sp. MBIC11204 RepID=B3Y5P7_9CHLO Length = 131 Score = 104 bits (259), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 46/77 (59%), Positives = 61/77 (79%) Query: 97 IKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREI 156 I+ +ST+C+GQAASM + LL AG KG+R LPNSR+M+HQP GG+QGQA+DI IHA EI Sbjct: 1 IRNPISTLCVGQAASMASLLLAAGEKGQRRSLPNSRIMLHQPSGGFQGQASDIRIHAEEI 60 Query: 157 LKVKGRMNELMALHTGQ 173 ++ R+N++ A HTGQ Sbjct: 61 TRLSKRLNQIYAKHTGQ 77 >UniRef50_C1FD32 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Micromonas sp. RCC299 RepID=C1FD32_9CHLO Length = 247 Score = 102 bits (253), Expect = 9e-21, Method: Compositional matrix adjust. Identities = 53/154 (34%), Positives = 88/154 (57%), Gaps = 3/154 (1%) Query: 53 MANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIYDTMQFIKP---DVSTICMGQA 109 +A + A++L L E+P+KDI L++N+ G +I D M++I+ D+S + MG Sbjct: 85 VATRVCAELLALSYEDPDKDIRLFVNATAGTQYCVQTILDMMEYIQSKGVDISVVGMGCV 144 Query: 110 ASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREILKVKGRMNELMAL 169 A A LL AG KGKR +P+ R+++ QPLGG G + ++ I A+E+ + + A Sbjct: 145 AGPPAMLLAAGTKGKRLAMPSCRIILSQPLGGLSGTSYEVRIQAKELSRNARMQVAVFAK 204 Query: 170 HTGQSLEQIERDTERDRFLSAPEAVEYGLVDSIL 203 TG+S + + RD ++S EA E L+D ++ Sbjct: 205 FTGKSFDDMGEYLVRDTYMSPQEAKELNLIDGVI 238 >UniRef50_B6G8S8 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Collinsella stercoris DSM 13279 RepID=B6G8S8_9ACTN Length = 193 Score = 101 bits (252), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 55/174 (31%), Positives = 95/174 (54%), Gaps = 3/174 (1%) Query: 31 FDIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSI 90 D+ S L RV+ L QV + + ++A ML LE ++PE I L ++SPGG + AG+ + Sbjct: 20 LDVLSELYNSRVLMLNEQVTPAVCSQLIANMLVLERKDPEAPITLLVSSPGGDVYAGLGL 79 Query: 91 YDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPL-GGYQGQATDI 149 D M+ + V T+ G ASM + +L G R P++ +++HQ + G Q TDI Sbjct: 80 IDVMRDLSCPVDTVGYGLVASMASVILACGR--HRSAYPHTNILLHQLMTGAGMSQQTDI 137 Query: 150 EIHAREILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEAVEYGLVDSIL 203 I A ++ +++E++A S +++ TERD + A+E G++D ++ Sbjct: 138 SIVANHAASLRAKLDEMLAERMSLSADEVHELTERDCWCDVGRALELGVIDEVI 191 >UniRef50_A1WEU3 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Verminephrobacter eiseniae EF01-2 RepID=A1WEU3_VEREI Length = 229 Score = 100 bits (250), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 63/196 (32%), Positives = 96/196 (48%), Gaps = 31/196 (15%) Query: 38 LKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIYDTMQFI 97 + R +F+ G ++ MA V Q+ L + N + IY++I+SPGG + +G I+D ++FI Sbjct: 24 INARKVFIIGTIDHKMAKEAVQQLHILASIN-DDPIYVFISSPGGHVESGDLIFDAIRFI 82 Query: 98 KPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQ----PLGGYQGQATDIEIHA 153 P V + G AS GA + A K R+ LPN+ ++H P G T + A Sbjct: 83 TPKVIVVSSGWVASAGALIYVAADKENRYSLPNTHFLLHMKEIIPAGEMTYTETADDRAA 142 Query: 154 REILK--------------------------VKGRMNELMALHTGQSLEQIERDTERDRF 187 RE ++ R+N + A TGQ+LE+I DT D + Sbjct: 143 RERFAQFVSSSYRKKPPEPVNKSLHEYRTNVMRARLNRIFAEATGQTLEKITADTGHDFW 202 Query: 188 LSAPEAVEYGLVDSIL 203 +SA +AVEYGLV I+ Sbjct: 203 MSAEQAVEYGLVHEII 218 >UniRef50_P42380 ATP-dependent Clp protease proteolytic subunit n=6 Tax=Chlorophyceae RepID=CLPP_CHLRE Length = 524 Score = 99.0 bits (245), Expect = 9e-20, Method: Compositional matrix adjust. Identities = 55/139 (39%), Positives = 85/139 (61%) Query: 67 ENPEKDIYLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRF 126 E K +++ INS GG + G++++D +QFIK T+ +G AAS + L G G+R+ Sbjct: 343 EEESKKVFMIINSFGGSVGNGITVHDALQFIKAGSLTLALGVAASAASLALAGGTIGERY 402 Query: 127 CLPNSRVMIHQPLGGYQGQATDIEIHAREILKVKGRMNELMALHTGQSLEQIERDTERDR 186 MIHQP GG GQA+DI I ++EI+K++ + E+ +L T + +I RD +RD Sbjct: 403 VTEGCHTMIHQPEGGLNGQASDIWIDSQEIMKIRLDVAEIYSLSTYRPRHKILRDLDRDF 462 Query: 187 FLSAPEAVEYGLVDSILTH 205 +L+A E + YGL D I T+ Sbjct: 463 YLTAMETIYYGLADEIATN 481 >UniRef50_A4S2Q5 ATP-dependent Clp protease proteolytic subunit n=4 Tax=Mamiellales RepID=A4S2Q5_OSTLU Length = 381 Score = 97.4 bits (241), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 53/183 (28%), Positives = 97/183 (53%), Gaps = 10/183 (5%) Query: 32 DIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPG---------G 82 D+ S LL R+ ++ + + L+VA++L+L E EK Y+YINS G G Sbjct: 149 DLPSLLLNARICYIGMSLVPAVTELVVAELLYLGYEQAEKPCYVYINSGGSLNEKGEVVG 208 Query: 83 VITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQP-LGG 141 + +I DTM++I+P + T+ +G+ + +L AG KG R LP+ ++ P L Sbjct: 209 MDNEAYAILDTMRYIRPKIHTVAVGKCHGNASLILAAGDKGCRHALPHVQISTQPPKLNR 268 Query: 142 YQGQATDIEIHAREILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEAVEYGLVDS 201 +++I A E + M+ +G+ ++ + +D +R R+ + +A+EYGL+D Sbjct: 269 TFDSTQNVQIRANECALYEDTYMGFMSEFSGKDIDVVRKDLDRTRYFTPNQAIEYGLIDK 328 Query: 202 ILT 204 ++T Sbjct: 329 VIT 331 >UniRef50_B0LNM7 ATP-dependent Clp protease proteolytic subunit n=2 Tax=Silene RepID=B0LNM7_SILCO Length = 247 Score = 95.9 bits (237), Expect = 8e-19, Method: Compositional matrix adjust. Identities = 61/211 (28%), Positives = 100/211 (47%), Gaps = 40/211 (18%) Query: 32 DIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIY 91 +I + L ++R++F+ +++ + I +L L EN KD L+INS GG + IY Sbjct: 25 EIQNFLYEKRILFIFEEIKPKVTCEITGLLLCLSNENEYKDFTLFINSAGGKTRDALPIY 84 Query: 92 DTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGY--------- 142 DTMQ + P V T+ +G AASMGA +L G GKR PN R+ IH P + Sbjct: 85 DTMQVVAPAVRTVGIGVAASMGALILLGGEMGKRAASPNCRIKIHLPASAFYTTDSDSNS 144 Query: 143 ----------------------------QGQATDIEIHAR---EILKVKGRMNELMALHT 171 + Q+ +E + E+L+++ ++ A T Sbjct: 145 DSDSNSDSTSDSNSDTDKKKKEKDPKKKKEQSRSVEDFSDGVGEMLRLREEFVKIYAKRT 204 Query: 172 GQSLEQIERDTERDRFLSAPEAVEYGLVDSI 202 + + IE+D R F+S+ EA YG++D++ Sbjct: 205 QKPISVIEKDLARGLFMSSEEAKAYGIIDTL 235 >UniRef50_C6UN97 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Candidatus Hodgkinia cicadicola Dsem RepID=C6UN97_HODCD Length = 160 Score = 95.1 bits (235), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 51/162 (31%), Positives = 82/162 (50%), Gaps = 2/162 (1%) Query: 42 VIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIYDTMQFIKPDV 101 ++ + G++ A + A+ L+ + + + L I+SPGG I AGM +YD +Q + DV Sbjct: 1 MLMVAGEITSKRA--LEARSKLLKTASTRRVLKLLIDSPGGEIDAGMGLYDALQAVAADV 58 Query: 102 STICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREILKVKG 161 T C+GQA S+ + LL G +GKR+C + V +H P G A + HA L+ + Sbjct: 59 ETGCVGQAHSIASLLLACGKRGKRWCAASCSVSLHWPTSSAFGSADCVLQHASSALEARA 118 Query: 162 RMNELMALHTGQSLEQIERDTERDRFLSAPEAVEYGLVDSIL 203 + H + L +IE SA A +GLVD ++ Sbjct: 119 LAVKAYMKHCNRRLAEIEEAMSAGTCASAWRAAAWGLVDRVV 160 >UniRef50_C5YWZ8 ATP-dependent Clp protease proteolytic subunit n=5 Tax=Poaceae RepID=C5YWZ8_SORBI Length = 388 Score = 94.7 bits (234), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 65/182 (35%), Positives = 93/182 (51%), Gaps = 10/182 (5%) Query: 32 DIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGG------VIT 85 D+ S LL R+IFL + + LI AQ L+L+ ++ K IYLYINS G ++ Sbjct: 164 DLPSLLLDSRIIFLGMPIVPAVTELIAAQFLWLDYDDRTKPIYLYINSTGTMDENNELVA 223 Query: 86 AGMSIYDTMQFI---KPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQP-LGG 141 + Y FI K V TI + A A LL+ G KGKR LPNS +H P + Sbjct: 224 SETDAYAIADFINRSKSKVYTINLSMAYGQAAMLLSLGVKGKRGVLPNSITKLHLPKVHK 283 Query: 142 YQGQATDIEIHAREILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEAVEYGLVDS 201 G A D+ I A+E+ EL++ G+ E++ + R+ A EA++YGL D+ Sbjct: 284 SGGAAIDMWIKAKELDTNTDYYLELLSKGVGKPKEELAEFLKGPRYFRAQEAIDYGLADT 343 Query: 202 IL 203 IL Sbjct: 344 IL 345 >UniRef50_A8IH07 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Chlamydomonas reinhardtii RepID=A8IH07_CHLRE Length = 415 Score = 94.7 bits (234), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 58/175 (33%), Positives = 97/175 (55%), Gaps = 11/175 (6%) Query: 40 ERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPG-----GVI----TAGMSI 90 +R+++L + + L+VA++L+LE + I + INS G G I + G+++ Sbjct: 59 QRIVYLGMPLVPAVTELMVAELLYLEKQGATLPIEMLINSSGTTRQDGEILSFDSEGVAL 118 Query: 91 YDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIE 150 TM FIK +ST+ MG A +L+ G KG R LP+S MI QP GQ IE Sbjct: 119 TSTMGFIKNPISTVNMGLAVGWSCVVLSFGRKGWRKSLPHSLAMIQQPRVPPTGQRQAIE 178 Query: 151 IH--AREILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEAVEYGLVDSIL 203 +H RE+L K + + +L TG +++++ D +R ++ +A+EYG++D I+ Sbjct: 179 VHIKWREVLDYKRELLRMFSLGTGLPVDKLDADMQRPLYMRPQDALEYGIIDEII 233 >UniRef50_B7ZIH9 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Ephedra equisetina RepID=B7ZIH9_EPHEU Length = 221 Score = 94.4 bits (233), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 57/169 (33%), Positives = 94/169 (55%), Gaps = 5/169 (2%) Query: 39 KERVIFLTGQVEDHMANLIVAQMLFLEAENPEK----DIYLYINSPGGVITAGMSIYDTM 94 + R IFL V++ + ++ V +L+L ++ K I++YINS GG I G+SI+D M Sbjct: 3 RTRCIFLGQPVDEDIGSIFVGILLYLFIDDIRKGKSRQIFMYINSCGGAILPGLSIFDIM 62 Query: 95 QFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQ-GQATDIEIHA 153 ++ + TI +G AS +L+AG G R P+SR+MIHQP + G A A Sbjct: 63 LQLRETIHTIGLGLVASTATLVLSAGTFGFRNTGPHSRIMIHQPRASLRDGPAWLFAKDA 122 Query: 154 REILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEAVEYGLVDSI 202 + +++ + + L T Q E IE +++ ++S EAV++GLVD + Sbjct: 123 FFVQQLRKMIVQCYCLRTPQFEELIENALDKNTYMSPEEAVDFGLVDRV 171 >UniRef50_Q4UBQ0 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Theileria annulata RepID=Q4UBQ0_THEAN Length = 261 Score = 91.3 bits (225), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 54/165 (32%), Positives = 94/165 (56%), Gaps = 10/165 (6%) Query: 53 MANLIVAQMLFLEAENPEKDIYLYINSPG------GVITA---GMSIYDTMQFIKPDVST 103 +A+L+++Q+L+L+ ++ +K I +YINS G+ T+ ++I D M ++K +V T Sbjct: 97 VAHLVISQLLYLDYDSQDKPIKIYINSDNERSNEDGISTSEIDALNIVDVMNYLKNEVIT 156 Query: 104 ICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQ-PLGGYQGQATDIEIHAREILKVKGR 162 I +G+A A +L +G GKR+ LP S ++ Q P QA DI I++REILK + Sbjct: 157 INLGKAYGPAALILASGTPGKRYVLPRSYTLLRQSPTTLSFRQAEDIAIYSREILKARRS 216 Query: 163 MNELMALHTGQSLEQIERDTERDRFLSAPEAVEYGLVDSILTHRN 207 + ++ + +S E+I ++ + E V +GL D IL + N Sbjct: 217 VIKVFSKACNKSEEEILEKINVGDYMGSQETVNFGLADKILENIN 261 >UniRef50_B2KDB1 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Elusimicrobium minutum Pei191 RepID=B2KDB1_ELUMP Length = 355 Score = 90.9 bits (224), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 61/169 (36%), Positives = 93/169 (55%), Gaps = 7/169 (4%) Query: 41 RVIFLTGQVEDHMANLIVAQMLFL-EAENPEKDIYLYINSPGGVITAGMSIYDTMQFIKP 99 R I++T + A IVAQ+ + E + I +Y+N GG TA +I D M Sbjct: 3 REIYITADISKETATDIVAQIKAMSEGIGANQPIKMYVNCFGGSATAMFTILDAMATCPC 62 Query: 100 DVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGG--YQGQA-TDIEIHAREI 156 ++ T+ +G+A S A + +AG+ KRF NSRVMIH+ Y + + IE +E Sbjct: 63 EIITVNLGEADSAAALIFSAGS--KRFITENSRVMIHEVRLSTLYSAEPLSQIEAELKEF 120 Query: 157 LKVKGRMNELMALHTGQSLEQIERDT-ERDRFLSAPEAVEYGLVDSILT 204 + M + +A +TG+ E+I+ D +D +LSA EA+EYGL D+ILT Sbjct: 121 QILNDNMFKALAKNTGKKPEEIKADVFGKDLYLSAEEAIEYGLADAILT 169 >UniRef50_B2Y1Y4 ATP-dependent Clp protease proteolytic subunit n=2 Tax=Welwitschia mirabilis RepID=B2Y1Y4_WELMI Length = 254 Score = 82.8 bits (203), Expect = 8e-15, Method: Compositional matrix adjust. Identities = 55/180 (30%), Positives = 95/180 (52%), Gaps = 5/180 (2%) Query: 32 DIYSRLLKERVIFLTGQVEDHMANLIVAQMLFL----EAENPEKDIYLYINSPGGVITAG 87 D+ + +R +F+ G + + +I+A + + AE + +++YINS GG G Sbjct: 6 DLMDLMTVQRCVFMFGPLTEEGGGVILATLFYYFFNDVAEYRNRPVFVYINSLGGAFMMG 65 Query: 88 MSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQG-QA 146 ++I+DTM IK V TI +G AS G LTAG +G R PNS +M+HQP A Sbjct: 66 LTIHDTMILIKERVFTIALGMVASTGTLTLTAGTRGIRHAAPNSLIMLHQPSADLDNTSA 125 Query: 147 TDIEIHAREILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEAVEYGLVDSILTHR 206 ++ + E+ +++ +M + A+ TG S + I+ ++ F+S A LVD++ + Sbjct: 126 SEFVKESEEVNQLRRKMVQSYAIRTGHSEQFIDICLDKPLFMSPRTAWNLNLVDNVFVPK 185 >UniRef50_Q5IX12 ATP-dependent Clp protease proteolytic subunit (Fragment) n=1 Tax=Prototheca wickerhamii RepID=Q5IX12_PROWI Length = 251 Score = 80.1 bits (196), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 42/122 (34%), Positives = 67/122 (54%), Gaps = 9/122 (7%) Query: 19 MVIEQTSRGERSFDIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYIN 78 M + + G D+ S LL R+ ++ + + L+++++L+L +P K +Y+YIN Sbjct: 130 MAQDTRAPGRAPPDLPSLLLDGRICYIGMPLVPAVTELVISELLWLNYSSPTKPVYVYIN 189 Query: 79 SPG---------GVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLP 129 S G G T +I DTM +I+PD+ T+ +GQA A LL +G KG RF LP Sbjct: 190 STGSQREGGESVGFETEATAIMDTMAYIRPDIYTLVIGQACGNAAMLLASGKKGHRFALP 249 Query: 130 NS 131 +S Sbjct: 250 HS 251 >UniRef50_B6KPT2 ATP-dependent Clp protease proteolytic subunit n=3 Tax=Toxoplasma gondii RepID=B6KPT2_TOXGO Length = 310 Score = 75.9 bits (185), Expect = 8e-13, Method: Compositional matrix adjust. Identities = 52/159 (32%), Positives = 73/159 (45%), Gaps = 28/159 (17%) Query: 73 IYLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSR 132 + L INSPGG +TA +S+ D + +V T +GQA + A LL AG G R P+ R Sbjct: 144 VDLLINSPGGSVTAALSLLDLRHSLPFEVHTTSIGQAGGVAALLLAAGTPGHRRAFPSCR 203 Query: 133 VMIHQPLGGYQGQATDIEIHAREILKVK----------------GRMNELMALHT----- 171 + Q G +GQA IE EI V+ G H+ Sbjct: 204 FSLRQIEGRVEGQAETIERETAEIESVQRLVYRHLAAFCTRRGPGDRGSERESHSERGEA 263 Query: 172 GQSLE-------QIERDTERDRFLSAPEAVEYGLVDSIL 203 G+ E +I+ D E + FLSA + VEYGL+D ++ Sbjct: 264 GEDRERLAKREKEIQEDCENELFLSAEQGVEYGLIDQVI 302 >UniRef50_Q40943 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Bigelowiella natans RepID=Q40943_BIGNA Length = 226 Score = 73.9 bits (180), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 51/185 (27%), Positives = 92/185 (49%), Gaps = 16/185 (8%) Query: 32 DIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIY 91 +I ++ K + IF+ G + D ++ I++ +LF +N E+ I L +NS G IT ++I Sbjct: 45 EIAQKMSKTKSIFIYGYLNDSLSIQIISNLLFFNGKN-EQGISLILNSNGSNITDSININ 103 Query: 92 DTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIE- 150 + M +I P+V T+ +G +L G K R PN+++ I + L G+ I+ Sbjct: 104 ECMNYIYPEVYTVGIGNIMDSIILILANGKKDSRAIFPNAKISISKKLLRSYGKYNTIQE 163 Query: 151 -----IHAREILKVKGRMNELMALHTGQSLEQIERDT----ERDRF--LSAPEAVEYGLV 199 +HA + R+ +AL T S + +++RF +S EA+ YG++ Sbjct: 164 KCVFLVHASFLF---SRILNHIALETHYSAVNDRKKNDLFIDKNRFFSISNKEALSYGII 220 Query: 200 DSILT 204 D +L Sbjct: 221 DKVLN 225 >UniRef50_B3JP66 ATP-dependent Clp protease proteolytic subunit n=10 Tax=Bacteroidales RepID=B3JP66_9BACE Length = 368 Score = 72.8 bits (177), Expect = 8e-12, Method: Compositional matrix adjust. Identities = 54/179 (30%), Positives = 97/179 (54%), Gaps = 9/179 (5%) Query: 29 RSFDIYSRLLKERVIFLTGQVEDH--MANLIVAQMLFLEAENPEKDIYLYINSPGGVITA 86 R F+I + IFL G + D+ + + +AQ L +EAE + I++ INS GG + + Sbjct: 25 RFFNITTSDDGTSTIFLYGDIGDYTEVQSGRIAQEL-MEAERVSRRIHVRINSNGGEVYS 83 Query: 87 GMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQA 146 G++I++ ++ + D+ G AASM + + G + +R+M+H GG G Sbjct: 84 GIAIFNALRHSQADIRIYVDGIAASMASVIALCGKPVE--MSKYARLMLHSVSGGCYGNK 141 Query: 147 TDIEIHAREILKVKGRMNELMALHTGQSLEQIER---DTERDRFLSAPEAVEYGLVDSI 202 D++ EI ++G ++E+ A G S E++++ D E D +L+A EA++ G +D I Sbjct: 142 QDLQRCMEEIESLEGSLSEIYAERLGMSKEEVKQTYFDGE-DHWLTAKEALDLGFIDDI 199 >UniRef50_A3DG62 ATP-dependent Clp protease proteolytic subunit n=4 Tax=root RepID=A3DG62_CLOTH Length = 247 Score = 68.9 bits (167), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 44/137 (32%), Positives = 70/137 (51%), Gaps = 2/137 (1%) Query: 71 KDIYLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPN 130 KDI ++INS GG + A IY ++ K V G A S + + AG + P Sbjct: 55 KDINVWINSYGGDVYAASRIYTGLKEHKGKVKVKIDGVAISAASVIAMAG--DEILMSPT 112 Query: 131 SRVMIHQPLGGYQGQATDIEIHAREILKVKGRMNELMALHTGQSLEQIERDTERDRFLSA 190 S +M+H P G +QG+A D+ A + +VK + L TG+S +I + + + ++SA Sbjct: 113 SIIMLHNPWGTFQGEAKDLRHGADVLDEVKETIINAYQLKTGKSRAKISQMMDEETWMSA 172 Query: 191 PEAVEYGLVDSILTHRN 207 +AV G D +L +N Sbjct: 173 KKAVAEGFADGMLYEKN 189 >UniRef50_B6KHW4 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Toxoplasma gondii ME49 RepID=B6KHW4_TOXGO Length = 131 Score = 68.2 bits (165), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 41/120 (34%), Positives = 77/120 (64%) Query: 84 ITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQ 143 + AG++++D + ++ V T+ +G AAS + LL AG+ G+RF + S V++HQP G Sbjct: 2 VVAGLALFDALSTLQAPVYTVNLGLAASAASLLLAAGSGGRRFAVEQSSVLLHQPAGSLA 61 Query: 144 GQATDIEIHAREILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEAVEYGLVDSIL 203 G+ ++++ RE+ K+ ++ L + TG+ ++ RD + ++ L+A +A EYGLVD++L Sbjct: 62 GRDSELQDERREVEKLHEKVVRLYSEVTGRPEARVRRDIKEEKVLTAEQACEYGLVDAVL 121 >UniRef50_Q3LW56 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Bigelowiella natans RepID=Q3LW56_BIGNA Length = 183 Score = 68.2 bits (165), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 43/175 (24%), Positives = 87/175 (49%), Gaps = 8/175 (4%) Query: 37 LLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIY----- 91 LL++ +++L+ +++ + ++ +L+L+ +N + I LYIN G S Y Sbjct: 9 LLEKNILYLSTEIDFNSTKSFISTILYLKNKNSNETINLYINGKGSSYYNLFSRYDQIIS 68 Query: 92 --DTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGY-QGQATD 148 D + +K +ST+ +G A + + + G+K R+ LP+S + I + Q +D Sbjct: 69 MHDIINSMKSKLSTLVLGIAFNEMCLISSYGSKDYRYALPSSLLYIDVFMNSIGSSQTSD 128 Query: 149 IEIHAREILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEAVEYGLVDSIL 203 I I E+ K + + + HT + +I R +++ EA+ YG++D I+ Sbjct: 129 IGIKKSELYKFNNLIINIFSKHTMRHPTEITSYMTRPFHMTSVEALNYGIIDKII 183 >UniRef50_Q3Z7J8 ATP-dependent Clp protease proteolytic subunit n=24 Tax=root RepID=Q3Z7J8_DEHE1 Length = 242 Score = 64.3 bits (155), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 45/167 (26%), Positives = 82/167 (49%), Gaps = 6/167 (3%) Query: 40 ERVIFLTGQVEDH--MANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIYDTMQFI 97 +R ++L G++ D + + Q+ E + + +I L+INSPGG + A IY+ + Sbjct: 20 DRTLYLDGEISDETWFGDEVTPQLFKDELSSGDGNITLWINSPGGDVFAAAQIYNMLMDY 79 Query: 98 KPDVSTICMGQAASMGAFLLTAGAKGKRFCL-PNSRVMIHQPLGGYQGQATDIEIHAREI 156 DV+ AAS + + AG K C+ P + +MIH P G +++ + Sbjct: 80 PHDVTVKIDALAASAASVIAMAGTK---VCMSPVAMMMIHNPATIAIGDTEEMQKAIDML 136 Query: 157 LKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEAVEYGLVDSIL 203 +VK + + +G S +I + + + +++A EAV+ G D IL Sbjct: 137 NEVKESIMNAYEIKSGLSRHKISQLMDAETWMNAKEAVKLGFADEIL 183 >UniRef50_C9L7D4 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Blautia hansenii DSM 20583 RepID=C9L7D4_RUMHA Length = 207 Score = 64.3 bits (155), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 49/181 (27%), Positives = 84/181 (46%), Gaps = 21/181 (11%) Query: 36 RLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPE------KDIYLYINSPGGVITAGMS 89 + L +R I L V++ + + + E+ + K I+LY+NSPGG +T G++ Sbjct: 25 QYLAQRKIILNDIVDEDIVRNVTLNIFQWNKEDKDIPIEKRKPIWLYLNSPGGDVTEGLN 84 Query: 90 IYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDI 149 + D ++ + V T+C ASM + AG KR+C NS ++IH ++ Sbjct: 85 VIDVIKASQTPVYTVCFATCASMAFHIFIAG--HKRYCFKNSILLIHDGEVSISNSSS-- 140 Query: 150 EIHAREILKVKGRMNELMALH-------TGQSLEQIERDTERDRFLSAPEAVEYGLVDSI 202 A++ +K ++E + H T + E I DTE F + + E G VD I Sbjct: 141 --KAKDTMKFIESLDERIKQHILENTKITAEFYESI-YDTEYYLF-ANDKGKELGCVDYI 196 Query: 203 L 203 + Sbjct: 197 I 197 >UniRef50_A0JQM5 ATP-dependent Clp protease proteolytic subunit n=2 Tax=Lactobacillus RepID=A0JQM5_LACS1 Length = 249 Score = 63.2 bits (152), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 39/135 (28%), Positives = 73/135 (54%), Gaps = 4/135 (2%) Query: 71 KDIYLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPN 130 K I L+INSPGG + G++I++ ++ K ++ G AAS+ + + +G F N Sbjct: 58 KTINLHINSPGGSVFEGIAIHNMLKMNKAKINVYVDGLAASIASVIAMSG--DTIFMPEN 115 Query: 131 SRVMIHQPLGGYQGQATDIEIHAREILKV-KGRMNELMALHTGQ-SLEQIERDTERDRFL 188 S +MIH P G + ++ A ++ ++ + + ++ G+ E + + + + +L Sbjct: 116 SMLMIHNPWTVAMGNSKELRKQADDLDRIAQASVKTYLSKSNGKIDEETLVKLLDEETWL 175 Query: 189 SAPEAVEYGLVDSIL 203 SA EAV+YGL D +L Sbjct: 176 SAQEAVDYGLADEVL 190 >UniRef50_A5F9J4 ATP-dependent Clp protease proteolytic subunit n=26 Tax=Firmicutes RepID=A5F9J4_CLOK5 Length = 255 Score = 63.2 bits (152), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 43/138 (31%), Positives = 68/138 (49%), Gaps = 6/138 (4%) Query: 73 IYLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLP-NS 131 I L+INSPGG + G++I + ++ K V+ AAS+ + + + G +P NS Sbjct: 56 INLHINSPGGNVFEGVAIGNMLKQHKAQVNVYVDALAASIASIIAMS---GNTILMPKNS 112 Query: 132 RVMIHQPLGGYQGQATDIEIHAREILKVKGRMNELMALHTGQSLEQ--IERDTERDRFLS 189 +MIH PL G A D A ++ K+ M G L+Q +++ + D +LS Sbjct: 113 MMMIHNPLSIAWGNAKDFRKKADDLDKIGLSMQTTYLNKAGDKLDQDTLQKLMDNDTWLS 172 Query: 190 APEAVEYGLVDSILTHRN 207 A +A YGL D + N Sbjct: 173 ADDAYSYGLCDVVEEENN 190 >UniRef50_D2SD97 Peptidase S14 ClpP n=1 Tax=Geodermatophilus obscurus DSM 43160 RepID=D2SD97_9ACTO Length = 128 Score = 62.8 bits (151), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 28/55 (50%), Positives = 41/55 (74%), Gaps = 1/55 (1%) Query: 33 IYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAG 87 ++ LL+ER++ L QV+D +AN I AQML L A++P +D++LYINSPGG + G Sbjct: 27 VFHCLLRERIVSLGSQVDDDIANQICAQML-LSADDPHRDVHLYINSPGGSVGRG 80 >UniRef50_C5CJP6 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Variovorax paradoxus S110 RepID=C5CJP6_VARPS Length = 227 Score = 62.8 bits (151), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 41/136 (30%), Positives = 66/136 (48%), Gaps = 2/136 (1%) Query: 71 KDIYLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPN 130 K + +YINSPGG + G++IY+ ++ + G AAS+ + + AG + + N Sbjct: 45 KALDIYINSPGGSVFEGLAIYNQIKRFDGEKIVHVDGIAASIASVIAMAGDEVR--IAAN 102 Query: 131 SRVMIHQPLGGYQGQATDIEIHAREILKVKGRMNELMALHTGQSLEQIERDTERDRFLSA 190 +MIH P G G A D+ A + KV+ + E TG E I + +++A Sbjct: 103 GTIMIHDPWGMAMGTAADMRKQAESLDKVRDVLLENYVARTGGKREDISSWMTAETWMNA 162 Query: 191 PEAVEYGLVDSILTHR 206 EAVE G S + + Sbjct: 163 DEAVERGFATSKVEEK 178 >UniRef50_A7FWE0 ATP-dependent Clp protease proteolytic subunit n=4 Tax=cellular organisms RepID=A7FWE0_CLOB1 Length = 252 Score = 62.8 bits (151), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 38/137 (27%), Positives = 72/137 (52%), Gaps = 10/137 (7%) Query: 75 LYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVM 134 +YINSPGG + G +IY+ ++ K ++ G AAS+ + + AG F NS +M Sbjct: 57 IYINSPGGSVFQGQAIYNIIKRHKAKINIHVDGVAASIASVIAMAG--NTIFMPKNSMMM 114 Query: 135 IHQPLGGYQGQATDIEIHAREILKVKGRMNELMALHTGQSLEQIERDT-----ERDRFLS 189 IH P G A ++ A ++ K++ L+ + ++ +++ R+T + + +L+ Sbjct: 115 IHNPWTFAYGNAKELRKQADDLDKIR---ESLIEAYLSKAGDKLSRETLIGIMDNETWLT 171 Query: 190 APEAVEYGLVDSILTHR 206 A E +YGL D ++ + Sbjct: 172 AQECYDYGLCDELVEEK 188 >UniRef50_C3WMS7 ATP-dependent Clp protease proteolytic subunit n=2 Tax=Fusobacteriaceae RepID=C3WMS7_9FUSO Length = 358 Score = 62.4 bits (150), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 42/135 (31%), Positives = 73/135 (54%), Gaps = 5/135 (3%) Query: 71 KDIYLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLP- 129 ++I ++INSPGG + A ++I +T++ K V+ G AAS + +A K +P Sbjct: 50 ENINVHINSPGGSVFAAVAIANTLKNHKAKVTAFIDGLAASAATIITSACDVVK---MPK 106 Query: 130 NSRVMIHQPLGGYQGQATDIEIHAREILKVKGRMNEL-MALHTGQSLEQIERDTERDRFL 188 N+ MIH PL G ++E + KVK + E +A G++ E++ + +++ Sbjct: 107 NAMFMIHNPLTWAYGNKQELEKTGILLDKVKDSILETYLAKAKGKTKEELSALMDEEKWF 166 Query: 189 SAPEAVEYGLVDSIL 203 +A EA EYG +D I+ Sbjct: 167 NAEEAKEYGFIDEIV 181 >UniRef50_C9DCR9 Gp103 n=5 Tax=unclassified Siphoviridae RepID=C9DCR9_9CAUD Length = 286 Score = 62.4 bits (150), Expect = 9e-09, Method: Compositional matrix adjust. Identities = 49/175 (28%), Positives = 78/175 (44%), Gaps = 19/175 (10%) Query: 44 FLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIYD------TMQFI 97 F+ G V D+ + Q+ E+P D+++ +NSPGG + AGM ++D T + Sbjct: 114 FVDG-VNDYSVEACLNQLALWHREDPNCDMHIVMNSPGGSVIAGMHLFDQIAAYSTRPWD 172 Query: 98 KPD-------VSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIE 150 D + G AASMG LL + +R P + +MIH+ G G+ +IE Sbjct: 173 TSDRPKGTHKTTMTVRGMAASMGGILLQ--SVDERIIGPEAYLMIHEISAGTGGKIGEIE 230 Query: 151 IHAREILKVKGRMNELMALHTGQSLEQIERDT---ERDRFLSAPEAVEYGLVDSI 202 + R+ ++ G + E D D +L + EA+ YG VD I Sbjct: 231 DMVGWYRHLCARIAKVFVHRAGGKITAEEFDAGWKRTDWWLDSDEALRYGFVDRI 285 >UniRef50_A9C2D1 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Delftia acidovorans SPH-1 RepID=A9C2D1_DELAS Length = 345 Score = 62.0 bits (149), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 43/139 (30%), Positives = 69/139 (49%), Gaps = 5/139 (3%) Query: 68 NPEKDIYLYINSPGGVITAGMSIYDTMQFIKPD---VSTICMGQAASMGAFLLTAGAKGK 124 N DI + +N+PGG + AG+ I++ ++ V+T MG AAS+G+ LL AG K Sbjct: 40 NVAGDIDVELNTPGGDVFAGLGIFNMLRAHAAKGFQVTTRVMGVAASIGSVLLLAG--DK 97 Query: 125 RFCLPNSRVMIHQPLGGYQGQATDIEIHAREILKVKGRMNELMALHTGQSLEQIERDTER 184 R N+ M H G G A ++ HA + KVKG++ + G + + Sbjct: 98 REMPKNTMAMTHNVASGIWGTADELRDHADTMDKVKGQLRGIYVDRLGVDEATADAMLGK 157 Query: 185 DRFLSAPEAVEYGLVDSIL 203 D +++A EA+ G +L Sbjct: 158 DNWMTADEALATGFATDLL 176 >UniRef50_B3EUB4 Peptidase S14 ClpP n=1 Tax=Candidatus Amoebophilus asiaticus 5a2 RepID=B3EUB4_AMOA5 Length = 455 Score = 60.8 bits (146), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 48/177 (27%), Positives = 83/177 (46%), Gaps = 8/177 (4%) Query: 37 LLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYI-NSPGGVITAGMSIYDTMQ 95 +L +R + L G V AN I ++ + ++ K I++ I NSPGG AG+ I MQ Sbjct: 219 VLSDRAVSLDGVVTSWKANYITDRIKYFNNKDKTKPIFIVIENSPGGSALAGLHIVQAMQ 278 Query: 96 FIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHARE 155 + V + AASM A + T K + PN+ ++ HQP G +++ Sbjct: 279 NSQAPVYVVLKTFAASMAALITTLAKKS--YAYPNAILLHHQPWSFTGGNLRELKEEIEF 336 Query: 156 ILKVKGRMNELMALHTGQSLEQI-----ERDTERDRFLSAPEAVEYGLVDSILTHRN 207 + ++ R+ +A G SL+++ E+ + D A A + VD ++T+ N Sbjct: 337 MKELWKRLGGQVAKKMGISLDKLDKQLYEKASRGDWTEFADNAKKIKWVDHVITNIN 393 >UniRef50_B5YV95 ATP-dependent Clp protease proteolytic subunit n=136 Tax=root RepID=B5YV95_ECO5E Length = 1156 Score = 60.8 bits (146), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 38/131 (29%), Positives = 69/131 (52%), Gaps = 4/131 (3%) Query: 73 IYLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLP-NS 131 I L+INSPGG + G++I++ ++ ++ G AASM + + AG +P N+ Sbjct: 545 INLHINSPGGDVFEGIAIFNALKNQGATITVYVDGVAASMASVIAMAG---DTVIMPENA 601 Query: 132 RVMIHQPLGGYQGQATDIEIHAREILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAP 191 +MIH+P G G A D+ +A + KV+ + A TG++ ++I + ++S Sbjct: 602 FMMIHKPWGFSGGDAEDMRSYADLLDKVESVLLPAYAQKTGKTTDEIAAMLADETWMSGA 661 Query: 192 EAVEYGLVDSI 202 E + +G D + Sbjct: 662 ECLAHGFADQV 672 >UniRef50_B9CLK4 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Atopobium rimae ATCC 49626 RepID=B9CLK4_9ACTN Length = 260 Score = 60.8 bits (146), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 40/134 (29%), Positives = 72/134 (53%), Gaps = 6/134 (4%) Query: 71 KDIYLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPN 130 K + ++INS GG + G++IY+ ++ +V T+C G A S+ + + AG+ +R P Sbjct: 62 KTVEVHINSYGGEVMQGVAIYNALRDCGREVVTVCDGFACSIASVIFMAGS--RRIMRPA 119 Query: 131 SRVMIHQPLGGYQGQATDIEIHAREILKVKGRMNELMALHTGQSLEQIERDTERD--RFL 188 S +M+H P +G A D+ A + L +++ A TG SL++ D D ++ Sbjct: 120 SLLMLHNPWVSARGNAQDLRKQA-DTLDTIAELSK-TAYMTGTSLDRETLDAVMDAETWV 177 Query: 189 SAPEAVEYGLVDSI 202 S +A+E+GL + Sbjct: 178 SPEQALEWGLATEV 191 >UniRef50_B1BPQ5 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Clostridium perfringens E str. JGS1987 RepID=B1BPQ5_CLOPE Length = 672 Score = 60.8 bits (146), Expect = 3e-08, Method: Composition-based stats. Identities = 47/144 (32%), Positives = 71/144 (49%), Gaps = 12/144 (8%) Query: 64 LEAENPEKDIYLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKG 123 ++A N EK + + INSPGG I A IY ++ K ++ G AAS + + AG Sbjct: 36 IKAANGEK-LTIKINSPGGDIFAASDIYTELREYKGEIEIKITGMAASAASVIAMAG--- 91 Query: 124 KRFCLPNSRVMIHQPLGGYQGQATDIEIHAREILKVKGRMNELMA----LHTGQSLEQIE 179 K P +++M+H G G D+E H E+LK N+ +A TG S E+ Sbjct: 92 KSSMSPTAQLMVHNVSTGTWGDYRDME-HTAEVLK---NANDTIANAYMCKTGMSREEAL 147 Query: 180 RDTERDRFLSAPEAVEYGLVDSIL 203 + +LSA +A E G +D I+ Sbjct: 148 ELMNNETYLSATKAKELGFIDEIM 171 >UniRef50_A1ZY45 ATP-dependent Clp protease proteolytic subunit n=5 Tax=Microscilla marina ATCC 23134 RepID=A1ZY45_9SPHI Length = 429 Score = 60.1 bits (144), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 49/141 (34%), Positives = 72/141 (51%), Gaps = 12/141 (8%) Query: 73 IYLYINSPGGVITAGMSIYDTMQFIK---PDV--STICMGQAASMGAFLLTAGAKGKRFC 127 I + INSPGG IT G+SI + I P+V T G A S+ + G K+ Sbjct: 53 INVRINSPGGKITDGLSICAAILNINQSTPNVRIDTYVDGLALSIAGLIAVCG---KKVG 109 Query: 128 LPN-SRVMIHQP-LGGYQG-QATDIEIHAREILKVKGRMNELMALHTGQSLEQIERDTER 184 + N +++M+H P +GG G Q IE H +++VK + L+A TGQ +E + + Sbjct: 110 MCNFAKLMLHNPFIGGKNGTQNGGIEQH-ETLMQVKEMLLTLLATRTGQKVEDLSLMMNQ 168 Query: 185 DRFLSAPEAVEYGLVDSILTH 205 +LSA EA G VD + H Sbjct: 169 TTWLSAAEAKRQGFVDEVFEH 189 >UniRef50_D0DKS7 ATP-dependent Clp protease proteolytic subunit n=6 Tax=root RepID=D0DKS7_9LACO Length = 241 Score = 60.1 bits (144), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 40/133 (30%), Positives = 69/133 (51%), Gaps = 2/133 (1%) Query: 71 KDIYLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPN 130 +DI L INSPGG I AG +Y ++ +V+ +GQA S +++ A A K P Sbjct: 48 QDITLEINSPGGYIDAGSEMYTDLKKYPGNVTAQVVGQACSAASWI--ALAADKVEMSPT 105 Query: 131 SRVMIHQPLGGYQGQATDIEIHAREILKVKGRMNELMALHTGQSLEQIERDTERDRFLSA 190 +++MIH+ G +G D+ + + + +L + TG ++I R +++A Sbjct: 106 AQMMIHRVSVGVEGNVDDLTSALQSLDSMDQTYVDLYSKRTGLDKQEIYRMMCATTWMNA 165 Query: 191 PEAVEYGLVDSIL 203 +AV+ G DSI+ Sbjct: 166 KQAVDKGFADSIM 178 >UniRef50_C1D8G7 ATP-dependent Clp protease proteolytic subunit n=4 Tax=Proteobacteria RepID=C1D8G7_LARHH Length = 252 Score = 59.3 bits (142), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 42/135 (31%), Positives = 62/135 (45%), Gaps = 12/135 (8%) Query: 73 IYLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAG-----AKGKRFC 127 I+L INSPGG + A ++ ++ K + G AAS F+ AG KG F Sbjct: 69 IHLRINSPGGSVFAARAMEQALREHKARIVVHIDGIAASAATFIAMAGDEIVMNKGAMF- 127 Query: 128 LPNSRVMIHQPLGGYQGQATDIEIHAREILKVKGRMNELMALHTGQSLEQIERDTERDRF 187 MIH+ G A D+ A + K+ G + + A TG+ +E I + + Sbjct: 128 ------MIHKAWTWTAGNADDLAKEAGLLAKIDGTLAQTYADRTGKDVETINGWMADETW 181 Query: 188 LSAPEAVEYGLVDSI 202 +A EAVEYG D + Sbjct: 182 FTADEAVEYGFADKL 196 >UniRef50_Q65ES6 ATP-dependent Clp protease proteolytic subunit n=2 Tax=Bacillus licheniformis ATCC 14580 RepID=Q65ES6_BACLD Length = 243 Score = 59.3 bits (142), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 39/133 (29%), Positives = 66/133 (49%), Gaps = 6/133 (4%) Query: 73 IYLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLP-NS 131 I LYINSPGG + G +I+ +Q K ++ A S+ + + AG K +P N+ Sbjct: 57 IDLYINSPGGDVFEGQAIHSMLQRHKAKINVYVDALAGSIASVIAMAGDK---ITMPSNA 113 Query: 132 RVMIHQPLGGYQGQATDIEIHAREILKVKGRMNELMALHTGQSLEQ--IERDTERDRFLS 189 +MIH P G G A + A ++ K+ + G L+ + + + + +L+ Sbjct: 114 MMMIHNPYMGMVGNAAEFRKAADDLDKITESIVSTYLAKAGDKLDDGTLRQLLDEETWLT 173 Query: 190 APEAVEYGLVDSI 202 A EA+ YGL+D + Sbjct: 174 ADEALNYGLIDEV 186 >UniRef50_Q4A301 Putative ATP-dependent protease proteolytic subunit n=2 Tax=dsDNA viruses, no RNA stage RepID=Q4A301_EHV86 Length = 238 Score = 58.9 bits (141), Expect = 9e-08, Method: Compositional matrix adjust. Identities = 41/131 (31%), Positives = 69/131 (52%), Gaps = 2/131 (1%) Query: 73 IYLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSR 132 + LYI+S GG + AG S + ++ V TI G AS FLL AG+ R+ +P+S Sbjct: 105 VSLYIHSCGGDLFAGFSAFSLIRRNVIPVVTIADGYVASAATFLLLAGSY--RYIVPSSH 162 Query: 133 VMIHQPLGGYQGQATDIEIHAREILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPE 192 V+IHQ G G+ +IE + ++ RM+ L T +++ + + L+ + Sbjct: 163 VLIHQLSTGGYGKFQEIEDDYKNCKRIMERMHALYKEETWLPSAILKKLLKSELDLTDDK 222 Query: 193 AVEYGLVDSIL 203 V+YG+V+ +L Sbjct: 223 CVKYGIVNELL 233 >UniRef50_A8U7Z4 ATP-dependent Clp protease proteolytic subunit n=4 Tax=Lactobacillales RepID=A8U7Z4_9LACT Length = 246 Score = 58.9 bits (141), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 36/135 (26%), Positives = 66/135 (48%), Gaps = 2/135 (1%) Query: 72 DIYLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNS 131 DI +Y+NS GG + G+ IY+ ++ ++ G AAS F++ AGA + + Sbjct: 54 DIVIYLNSTGGDVFQGIEIYNYLKNHSSHITVEVTGTAASAATFIV-AGA-DEAIMNTGT 111 Query: 132 RVMIHQPLGGYQGQATDIEIHAREILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAP 191 MIH+ G D++ + + + + TGQS EQ+ E +++ +A Sbjct: 112 SFMIHEASSFAWGNKADLKKTLNALETIDESIIAIYTEKTGQSNEQLNDWMEEEKWFTAE 171 Query: 192 EAVEYGLVDSILTHR 206 EAV+YG + + ++ Sbjct: 172 EAVKYGFANKVKENK 186 >UniRef50_A3UVN6 ATP-dependent Clp protease proteolytic subunit n=3 Tax=Vibrionaceae RepID=A3UVN6_VIBSP Length = 670 Score = 58.5 bits (140), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 38/134 (28%), Positives = 70/134 (52%), Gaps = 4/134 (2%) Query: 71 KDIYLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLP- 129 K++ L + S GG + G+++Y+ ++ K V I G AAS+ ++L A +P Sbjct: 46 KEVELRMLSGGGSVYQGLAMYNALKAHKGKVVGIVDGMAASIATYVLLAC---DSIRMPE 102 Query: 130 NSRVMIHQPLGGYQGQATDIEIHAREILKVKGRMNELMALHTGQSLEQIERDTERDRFLS 189 N+ +MIH P G G +I +++ ++E A +GQ LE++ E + + + Sbjct: 103 NAMLMIHNPAIGAWGGEKEINSALQQLQAATKTISEAYAEKSGQPLEEVLTAMESETWFT 162 Query: 190 APEAVEYGLVDSIL 203 A A ++GLVD ++ Sbjct: 163 AQAAKDWGLVDEVV 176 >UniRef50_A3DFX4 ATP-dependent Clp protease proteolytic subunit n=6 Tax=Bacteria RepID=A3DFX4_CLOTH Length = 242 Score = 57.8 bits (138), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 49/165 (29%), Positives = 79/165 (47%), Gaps = 4/165 (2%) Query: 41 RVIFLTGQV--EDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIYDTMQFIK 98 R +++ G + E + + + + E + E DI ++INSPGG I A IY+ + K Sbjct: 24 RTLYIDGPIAEESWLGDEVTPKQFKSELLSGEGDITIWINSPGGDIFAANQIYNMLMDYK 83 Query: 99 PDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREILK 158 V+ G AAS + + AG G F P S +MIH P+ G ++E + + Sbjct: 84 GKVTVKIDGIAASAASVIAMAG--GDVFMSPVSMMMIHNPMTIAIGDTEEMEKAIAMLEE 141 Query: 159 VKGRMNELMALHTGQSLEQIERDTERDRFLSAPEAVEYGLVDSIL 203 +K + L TG S +I + + + +A +AVE G D IL Sbjct: 142 IKESIINAYELKTGLSRAKISHLMDAESWFNARKAVELGFADGIL 186 >UniRef50_C6VLG0 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Lactobacillus plantarum JDM1 RepID=C6VLG0_LACPJ Length = 247 Score = 57.0 bits (136), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 43/131 (32%), Positives = 67/131 (51%), Gaps = 10/131 (7%) Query: 77 INSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIH 136 INS GG++ AG IY + + V +G AAS + + AG + P ++MIH Sbjct: 47 INSGGGLMDAGTEIYTALMAYQGKVMVNIVGMAASSASLIAMAGNPTR--ISPVGQIMIH 104 Query: 137 QPLGGYQGQATDIEIHAREILKVKGRMNELMA----LHTGQSLEQIERDTERDRFLSAPE 192 GG +G D + EILK + +E +A L TG S+E ++ + + +L+A + Sbjct: 105 NVAGGLRGDYRD-QAKLSEILK---QSSEAIANAYHLKTGLSMEDLQAKMDSETYLNADQ 160 Query: 193 AVEYGLVDSIL 203 A E G VD I+ Sbjct: 161 AKELGFVDEIM 171 >UniRef50_A5KJS2 ATP-dependent Clp protease proteolytic subunit n=6 Tax=Firmicutes RepID=A5KJS2_9FIRM Length = 268 Score = 57.0 bits (136), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 46/167 (27%), Positives = 76/167 (45%), Gaps = 6/167 (3%) Query: 40 ERVIFLTGQVEDHM--ANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIYDTMQFI 97 ER +FL G + D + + Q+ E +I ++INSPGG + A IY+ ++ Sbjct: 20 ERTLFLNGMISDETWYGDEVTPQLFKDELNAGNGNITVWINSPGGDVFAAAQIYNMLRDY 79 Query: 98 KPDVSTICMGQAASMGAFLLTAGAKGKRFCL-PNSRVMIHQPLGGYQGQATDIEIHAREI 156 K V+ G AAS G C+ P + +MIH P G+A D++ + Sbjct: 80 KGSVTVKIDGIAASA---ASVIAMAGDTVCVSPVAMMMIHNPATMAMGEAKDMQKAIAML 136 Query: 157 LKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEAVEYGLVDSIL 203 +VK + TG + ++ + + + +A +AVE G D IL Sbjct: 137 NEVKESILNAYEFKTGLTRARLSHMMDDETWFNAKKAVELGFADKIL 183 >UniRef50_C4ML05 P05 n=1 Tax=Xanthomonas phage phiL7 RepID=C4ML05_9CAUD Length = 245 Score = 57.0 bits (136), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 41/132 (31%), Positives = 67/132 (50%), Gaps = 2/132 (1%) Query: 72 DIYLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNS 131 D+ + I+SPGG + AG++IY+ ++ V+ +G AAS + + AG P + Sbjct: 74 DVTVNIDSPGGDMFAGLAIYNQLRAHDGVVTVNVVGTAASAASVIAMAGDVVNMH--PAA 131 Query: 132 RVMIHQPLGGYQGQATDIEIHAREILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAP 191 +MIHQ G + D A + M E+ A TG+ L ++E+ + + +A Sbjct: 132 FIMIHQTWLLAAGNSRDFIALAEMLAPFDKAMAEIYASRTGKPLAEVEQLMAEETWFNAE 191 Query: 192 EAVEYGLVDSIL 203 EAV YGL D +L Sbjct: 192 EAVAYGLADKVL 203 >UniRef50_Q3Z3P3 ATP-dependent Clp protease proteolytic subunit n=5 Tax=Enterobacteriaceae RepID=Q3Z3P3_SHISS Length = 381 Score = 57.0 bits (136), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 40/133 (30%), Positives = 65/133 (48%), Gaps = 4/133 (3%) Query: 72 DIYLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLP-N 130 +I+L I+SPGG I G++IY+ ++ G AASM +F+ G +P N Sbjct: 44 EIHLRIHSPGGDIFEGLAIYNALKNHPAKKIVHIEGMAASMASFIAMCG---DHIVMPEN 100 Query: 131 SRVMIHQPLGGYQGQATDIEIHAREILKVKGRMNELMALHTGQSLEQIERDTERDRFLSA 190 + +MIH P G G + D+ A + K+ M E A TG+S ++I E + ++ Sbjct: 101 AMMMIHAPRGVTAGVSGDVRRFADLMDKLGDTMAETYAGRTGRSKQEITAMMEAETWMDG 160 Query: 191 PEAVEYGLVDSIL 203 E G D ++ Sbjct: 161 NECKANGFADEVI 173 >UniRef50_B5R8Q7 ATP-dependent Clp protease proteolytic subunit n=25 Tax=root RepID=B5R8Q7_SALG2 Length = 709 Score = 57.0 bits (136), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 37/132 (28%), Positives = 67/132 (50%), Gaps = 4/132 (3%) Query: 73 IYLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLP-NS 131 I L+I+SPGG + G++IY+ ++ + G A SM + + G +P N+ Sbjct: 86 INLHIHSPGGAVLDGIAIYNLLKNHPAQKTVYIDGMACSMASAIAMVG---NPIIMPENA 142 Query: 132 RVMIHQPLGGYQGQATDIEIHAREILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAP 191 +MIH+P G G+A DI +A + K++ + + TG++ E I ++ ++S Sbjct: 143 MMMIHKPRGVAGGEAEDIREYADLLDKIESVIIPIYTEKTGKTPEDIAAMLAKETWMSGA 202 Query: 192 EAVEYGLVDSIL 203 E V G D ++ Sbjct: 203 ECVSEGFADKLI 214 >UniRef50_A5ZPL9 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Ruminococcus obeum ATCC 29174 RepID=A5ZPL9_9FIRM Length = 223 Score = 56.2 bits (134), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 44/149 (29%), Positives = 78/149 (52%), Gaps = 13/149 (8%) Query: 63 FLEAENPEKDIYLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAK 122 L + +++I + +NS GG + AG IY ++ K +V A S + AG Sbjct: 35 ILNSAAVDEEIEVLVNSGGGSVMAGQEIYSALKQ-KKNVVIKIQSMAGSAAGVIAMAG-- 91 Query: 123 GKRFCLPNSRVMIHQ-PLGGYQGQATDIEIHAREILKVKGRMNELMAL----HTGQSLEQ 177 K P + +MIH + G G D++ +A EILK +MN +A +G+SL++ Sbjct: 92 -KCQMSPVAMIMIHNVSMSGASGDYHDMQKNA-EILK---QMNSALAAAYTEKSGRSLDE 146 Query: 178 IERDTERDRFLSAPEAVEYGLVDSILTHR 206 I + +R+ +L+A + ++YG VD I++ + Sbjct: 147 ILKLMDRETWLTANQCLDYGFVDEIMSEQ 175 >UniRef50_Q0S7S6 ATP-dependent Clp protease proteolytic subunit n=3 Tax=Rhodococcus RepID=Q0S7S6_RHOSR Length = 219 Score = 56.2 bits (134), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 42/176 (23%), Positives = 84/176 (47%), Gaps = 5/176 (2%) Query: 33 IYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIYD 92 + RL +R++ LTG+++ N A + L+A + ++ L+++ + A ++ D Sbjct: 44 LAERLFDKRIVSLTGRLDSEATNRAAASLALLDASG-DGEVQLWLHGVDADVDAAATLLD 102 Query: 93 TMQFIKPDVSTICMGQAASMG-AFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEI 151 T+ + + C G M AFL A +R ++ + +P G A+D+ I Sbjct: 103 TLDLMGVPLHVHCRGDVRGMAVAFLAPAD---RRTAASHATFHLREPQTSCTGPASDVAI 159 Query: 152 HAREILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEAVEYGLVDSILTHRN 207 A + R+ + +A G+ ++ + D R L+A EA +YGL+D++ R+ Sbjct: 160 AAEHHEQQLRRLQQRIADSCGRPVDAVSGDMRDHRILTADEARDYGLIDAVTGARS 215 >UniRef50_D2LX80 Peptidase S14 ClpP n=1 Tax=Bacillus cellulosilyticus DSM 2522 RepID=D2LX80_BACS4 Length = 243 Score = 55.8 bits (133), Expect = 8e-07, Method: Compositional matrix adjust. Identities = 39/131 (29%), Positives = 68/131 (51%), Gaps = 7/131 (5%) Query: 71 KDIYLYINSPGGVITAGMSIYDTMQFIKPDVSTICM---GQAASMGAFLLTAGAKGKRFC 127 K I LY+NS GG + +G+S+ + ++ + S I G A S+ + L+ K +C Sbjct: 50 KKINLYVNSGGGSVFSGLSMLNMLKRAREKGSYITAYVDGLAGSIASVLIFGA--NKIYC 107 Query: 128 LPNSRVMIHQPLGGYQGQATDIEIHAREILKV-KGRMNELM-ALHTGQSLEQIERDTERD 185 NS +MIH+ G G ATD A ++ K+ +G +N L G +E I+ +++ Sbjct: 108 PSNSYIMIHRAWTGMYGNATDFLKMAEDLEKIDEGILNTYKDNLREGVDIETIKEMVDKE 167 Query: 186 RFLSAPEAVEY 196 +L+ +A +Y Sbjct: 168 TWLTGEDASKY 178 >UniRef50_P42379 Ceu clpP intein n=2 Tax=Chlamydomonas moewusii RepID=CLPP_CHLMO Length = 1010 Score = 55.8 bits (133), Expect = 8e-07, Method: Composition-based stats. Identities = 26/63 (41%), Positives = 43/63 (68%) Query: 143 QGQATDIEIHAREILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEAVEYGLVDSI 202 QGQA+DI I ++EI+K++ + E+ +L T + +I RD +RD +L+A E + YGL D I Sbjct: 907 QGQASDIWIDSQEIMKIRLDVAEIYSLATYRPRHKILRDLDRDFYLTATETIHYGLADEI 966 Query: 203 LTH 205 ++ Sbjct: 967 ASN 969 Score = 49.3 bits (116), Expect = 8e-05, Method: Composition-based stats. Identities = 31/80 (38%), Positives = 47/80 (58%), Gaps = 2/80 (2%) Query: 59 AQMLFLEAENPEKDIYLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLT 118 A+ F E E+ K +++ INS GG + G++++D +QFIK T+ +G AAS + L Sbjct: 369 AERAFQEEES--KKVFVIINSFGGSVGNGITVHDALQFIKAGSLTLALGVAASAASLALA 426 Query: 119 AGAKGKRFCLPNSRVMIHQP 138 G G+R+ VMIHQP Sbjct: 427 GGTIGERYVTEGCHVMIHQP 446 >UniRef50_D2LST4 Peptidase S14 ClpP n=1 Tax=Bacillus cellulosilyticus DSM 2522 RepID=D2LST4_BACS4 Length = 250 Score = 55.8 bits (133), Expect = 8e-07, Method: Compositional matrix adjust. Identities = 46/142 (32%), Positives = 72/142 (50%), Gaps = 5/142 (3%) Query: 63 FLEAENPEKDIYLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAK 122 +E N E D+ + INS GG + AG IY ++ K +V MG A+ A + G K Sbjct: 34 LIEEANGE-DLEVEINSGGGSVWAGSEIYTLLKSCKQNVVVNIMG-IAASAASVAAMGGK 91 Query: 123 GKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREILK-VKGRMNELMALHTGQSLEQIERD 181 R P ++MIH + G G ++E HA E+LK V + L TG+++E++ Sbjct: 92 LIRIA-PTGQIMIHNSMSGASGDHRELE-HAAEMLKGVDRSIANAYILKTGKNMEELLSL 149 Query: 182 TERDRFLSAPEAVEYGLVDSIL 203 ++ ++ A EA E G D I+ Sbjct: 150 MAKETYMGAKEAKELGFADEIM 171 >UniRef50_B8DAG3 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Listeria monocytogenes HCC23 RepID=B8DAG3_LISMH Length = 276 Score = 55.8 bits (133), Expect = 8e-07, Method: Compositional matrix adjust. Identities = 38/128 (29%), Positives = 62/128 (48%), Gaps = 4/128 (3%) Query: 73 IYLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLP-NS 131 IY+ INS GG + G +IY+ + + G AAS+ + + AG +P N+ Sbjct: 58 IYVNINSNGGFVYEGQAIYNQLVRHPAQIHVRIDGMAASIASVIAMAG---DIIEMPANA 114 Query: 132 RVMIHQPLGGYQGQATDIEIHAREILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAP 191 ++MIH+P GG G +D+E R + K + HT + +IE ++++S Sbjct: 115 QMMIHEPAGGAFGNKSDLESAIRALDASKQSIIAAYRTHTTLEVSEIESMMAEEKWMSGQ 174 Query: 192 EAVEYGLV 199 EA E G Sbjct: 175 EAYELGFA 182 >UniRef50_A6QII7 ATP-dependent Clp protease proteolytic subunit n=38 Tax=root RepID=A6QII7_STAAE Length = 245 Score = 55.8 bits (133), Expect = 9e-07, Method: Compositional matrix adjust. Identities = 46/141 (32%), Positives = 75/141 (53%), Gaps = 4/141 (2%) Query: 62 LFLEAENPEKDIYLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGA 121 + + E ++D+ + INS GG + AG IY ++ K V+ AAS + + AG Sbjct: 31 VLTQLEFSDEDVDIIINSNGGNLVAGSEIYTHLRAHKGKVNVRITAIAASAASLIAMAGD 90 Query: 122 KGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREILKVKGR-MNELMALHTGQSLEQIER 180 + P +R+MIH P QG+A D+ HA E L+ G+ M E A+ G++ +++ Sbjct: 91 HIE--MSPVARMMIHNPSSIAQGEAKDLN-HAAETLEHVGQIMAEAYAVRAGKNKQELVE 147 Query: 181 DTERDRFLSAPEAVEYGLVDS 201 R+ +L+A EA+E G DS Sbjct: 148 MMARETWLNADEAIEQGFADS 168 >UniRef50_UPI0001B43327 serine protease n=1 Tax=Listeria monocytogenes FSL N1-017 RepID=UPI0001B43327 Length = 235 Score = 55.8 bits (133), Expect = 9e-07, Method: Compositional matrix adjust. Identities = 45/134 (33%), Positives = 70/134 (52%), Gaps = 6/134 (4%) Query: 73 IYLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSR 132 I L++NSPGG + G++I + ++ K V AAS+ A ++ AGA K NS Sbjct: 52 INLHVNSPGGNVFEGIAISNMIKAHKAKVIAYVDALAASI-ASVIVAGA-DKVVMYENSM 109 Query: 133 VMIHQPLGGYQGQATDIEIHAREILKVKGRMNELMAL-HTGQSL--EQIERDTERDRFLS 189 MIH P G +T++ HA + L + + L L G L E+I++ + +LS Sbjct: 110 QMIHNPTWNVSGNSTELRKHADD-LDAIAQASVLTYLSKAGDKLSEEKIKQIMAEETWLS 168 Query: 190 APEAVEYGLVDSIL 203 A +A+ +GL D IL Sbjct: 169 AKDALGHGLCDEIL 182 >UniRef50_B0TCT9 ATP-dependent Clp protease proteolytic subunit n=9 Tax=Firmicutes RepID=B0TCT9_HELMI Length = 254 Score = 55.5 bits (132), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 48/165 (29%), Positives = 77/165 (46%), Gaps = 4/165 (2%) Query: 41 RVIFLTGQV--EDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIYDTMQFIK 98 R ++L G + E + + + + E + E DI ++INSPGG + A IY+ + K Sbjct: 37 RTLYLDGPIAEESWLGDEVTPKQFKSELLSGEGDITIWINSPGGDVFAASQIYNMLMDYK 96 Query: 99 PDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREILK 158 V+ G AAS + + AG G P S +MIH P G ++E + + Sbjct: 97 GKVTVKIDGIAASAASVIAMAG--GDVLMSPVSMIMIHNPATIAIGDTEEMEKAIAMLEE 154 Query: 159 VKGRMNELMALHTGQSLEQIERDTERDRFLSAPEAVEYGLVDSIL 203 +K + L TG S +I + + + +A +AVE G D IL Sbjct: 155 IKESIINAYELKTGLSRAKISHLMDAESWFNARKAVELGFADGIL 199 >UniRef50_UPI0001B44862 Clp protease domain protein n=3 Tax=Listeria monocytogenes RepID=UPI0001B44862 Length = 265 Score = 55.5 bits (132), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 39/141 (27%), Positives = 70/141 (49%), Gaps = 4/141 (2%) Query: 68 NPEKDIYLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFC 127 N ++ ++INS GG + AG IY ++ +V +G AAS + + AG + Sbjct: 38 NASGEVEVWINSNGGDVFAGSEIYTALKSYNGNVVVKIVGMAASAASVIAMAG--NEVLI 95 Query: 128 LPNSRVMIHQPLGGYQGQATDIEIHAREILKVKG-RMNELMALHTGQSLEQIERDTERDR 186 P ++MIH G +G +++ A EI + + L TG++LE++ + Sbjct: 96 SPTGQMMIHNVQYGGRGDYRELK-KASEIAQNANISIANAYQLKTGKTLEELLNMMGEET 154 Query: 187 FLSAPEAVEYGLVDSILTHRN 207 +L++ +AVE GL D ++ N Sbjct: 155 WLNSQQAVELGLADGVMFQEN 175 >UniRef50_A6N1Z7 Clp protease n=1 Tax=Microbacterium phage Min1 RepID=A6N1Z7_9CAUD Length = 399 Score = 55.1 bits (131), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 39/132 (29%), Positives = 66/132 (50%), Gaps = 6/132 (4%) Query: 72 DIYLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPN- 130 ++ ++INSPGG G++I + ++ K V + G AAS + + A G N Sbjct: 62 EMTVHINSPGGAAWDGITIMNALRAHKAQVHVVVDGLAASAASVI----AMGGDTITMNR 117 Query: 131 -SRVMIHQPLGGYQGQATDIEIHAREILKVKGRMNELMALHTGQSLEQIERDTERDRFLS 189 +++MIH GG G A ++E A + K+ + + A TG + EQ + + + + Sbjct: 118 GAQMMIHDASGGVWGNAAEVEAVATILHKLSDSIADTYAARTGGTREQWRAVMKDEAWYT 177 Query: 190 APEAVEYGLVDS 201 A EAV GL D+ Sbjct: 178 AEEAVAAGLADT 189 >UniRef50_Q3LWK4 Clp protease n=1 Tax=Bigelowiella natans RepID=Q3LWK4_BIGNA Length = 237 Score = 55.1 bits (131), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 42/190 (22%), Positives = 80/190 (42%), Gaps = 22/190 (11%) Query: 32 DIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPG---------G 82 D+ S L + +IF+ + + L+ Q+L+ + +K I INS G Sbjct: 55 DVPSFLFENSIIFIGMPLTEITIELLFCQLLWQNNKKSKKYINFIINSYGSHSSYTDINN 114 Query: 83 VITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGY 142 + + +++ D ++F ++I +G++ FL + KR L NS P Sbjct: 115 IFGSYLTLIDLIEFNSYQTNSIVIGKSFGTALFLFLTSSTNKRIALENSSFSFETPF--L 172 Query: 143 QGQATDIEIHAREILKVKGRMNEL-----MALHTGQSLEQIERDTERDRFLSAPEAVEYG 197 + + I++ +N + +LH SL Q R+ ++ EA+E G Sbjct: 173 YSSTRSLSNLSNSIIEFNTFINYMKEKFNYSLHYNNSLLQ------SKRYFNSKEALEIG 226 Query: 198 LVDSILTHRN 207 ++D I T +N Sbjct: 227 IIDEIFTSKN 236 >UniRef50_B9PUD7 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Toxoplasma gondii GT1 RepID=B9PUD7_TOXGO Length = 387 Score = 55.1 bits (131), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 37/112 (33%), Positives = 67/112 (59%), Gaps = 3/112 (2%) Query: 75 LYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVM 134 +++NS GG + AG++++D + ++ V T+ +G AAS + LL AG+ G+RF + S V+ Sbjct: 217 IFVNSAGGSLNAGLALFDALSTLQAPVYTVNLGLAASAASLLLAAGSGGRRFAVEQSSVL 276 Query: 135 IHQPLGGYQGQATDIEIHAREILKVKGRMNELMALHTGQSL---EQIERDTE 183 +HQP G G+ ++++ RE+ K+ ++ L T + E ERDT+ Sbjct: 277 LHQPAGSLAGRDSELQDERREVEKLHEKVVRLYRCETAEEATRSEGTERDTD 328 >UniRef50_Q892G9 ATP-dependent Clp protease proteolytic subunit n=2 Tax=root RepID=Q892G9_CLOTE Length = 226 Score = 54.7 bits (130), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 40/128 (31%), Positives = 64/128 (50%), Gaps = 4/128 (3%) Query: 77 INSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIH 136 INS GG + AG IY ++ K +V+ +G AAS + + AG K P ++MIH Sbjct: 48 INSGGGSVFAGSEIYTLLKDYKGNVTVKIVGLAASAASVIAMAG--DKVLISPTGQIMIH 105 Query: 137 QPLGGYQGQATDIEIHAREILK-VKGRMNELMALHTGQSLEQIERDTERDRFLSAPEAVE 195 G + G ++E EILK V ++ L TG S E++ ++ +L+ A++ Sbjct: 106 NASGCFSGDYRNME-KGSEILKNVNITISNAYKLKTGLSSEELLDMMNKETWLTPQNALD 164 Query: 196 YGLVDSIL 203 VD I+ Sbjct: 165 NKFVDEIM 172 >UniRef50_C4GAS5 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Shuttleworthia satelles DSM 14600 RepID=C4GAS5_9FIRM Length = 224 Score = 54.3 bits (129), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 46/144 (31%), Positives = 71/144 (49%), Gaps = 14/144 (9%) Query: 64 LEAENPEKDIYLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKG 123 LE + EK + + INS GG + A IY +Q K DV +G AAS + + A G Sbjct: 45 LEEASGEK-VDIDINSAGGNVFAASEIYAAIQGYKGDVKIHVVGLAASAASMIACA---G 100 Query: 124 KRFCLPNSRVMIHQPLGGYQGQATDIEIHAREILKVKGR-MNELMALHTGQSLEQIERDT 182 K +++M+H G D+ HA E+LK R + E +G S E+D Sbjct: 101 KSDITRTAQMMVHNVSAYTAGDYRDMN-HASEVLKQANRAIAEAYVAKSGMS----EKDA 155 Query: 183 ----ERDRFLSAPEAVEYGLVDSI 202 + + +++A +AV+YGL+D I Sbjct: 156 LDLMDAETWITAQDAVDYGLIDEI 179 >UniRef50_C2KJ97 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Leuconostoc mesenteroides subsp. cremoris ATCC 19254 RepID=C2KJ97_LEUMC Length = 235 Score = 54.3 bits (129), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 39/126 (30%), Positives = 61/126 (48%), Gaps = 2/126 (1%) Query: 73 IYLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSR 132 I L INS GG + G++IY+ ++ K V+ G AAS+ + + AG S Sbjct: 50 INLSINSGGGSVFDGIAIYNMLKSHKATVNVYIEGLAASIASVIAMAG--DTITMRSGSM 107 Query: 133 VMIHQPLGGYQGQATDIEIHAREILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPE 192 +M+H P QG A ++ A + K + ++ + TG S + I + +LSA E Sbjct: 108 IMVHMPWTLSQGNAEEMRKTADTLEKTGDSIVDIYSERTGISSDDIRNIMNDETWLSAEE 167 Query: 193 AVEYGL 198 AVE G Sbjct: 168 AVEQGW 173 >UniRef50_A3JIS6 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Marinobacter sp. ELB17 RepID=A3JIS6_9ALTE Length = 621 Score = 54.3 bits (129), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 42/132 (31%), Positives = 68/132 (51%), Gaps = 5/132 (3%) Query: 73 IYLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSR 132 + + INS GG ++ ++IY+ + + PDV G AAS +F+ AG K N+ Sbjct: 43 VNVRINSEGGDVSHAIAIYNALNEL-PDVMIHIDGLAASSASFVAMAG--NKTLMAGNAI 99 Query: 133 VMIHQPLGGYQGQATDIEIHAREIL-KVKGRMNELMALHTGQSLEQIERDTERDRFLSAP 191 +MIH+P G G +D EIL K + + A TG S +++ + +L+A Sbjct: 100 LMIHRPWTGAVGD-SDAMRQTGEILDKFQPILVSAYAKKTGLSDDKLNEMLAAETWLTAA 158 Query: 192 EAVEYGLVDSIL 203 EA+E G VD ++ Sbjct: 159 EALELGFVDEVI 170 >UniRef50_B7QPY3 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Ruegeria sp. R11 RepID=B7QPY3_9RHOB Length = 377 Score = 54.3 bits (129), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 35/136 (25%), Positives = 67/136 (49%), Gaps = 2/136 (1%) Query: 64 LEAENPEKDIYLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKG 123 LE + DI + +NS GG G++IY+ ++ +V+ + G AAS + + AG Sbjct: 34 LEELGDDADITVRVNSGGGYTDQGIAIYNALKAHGGEVTVVVDGVAASAASLISMAG--D 91 Query: 124 KRFCLPNSRVMIHQPLGGYQGQATDIEIHAREILKVKGRMNELMALHTGQSLEQIERDTE 183 + + +M+H P G G A +I I R + ++ M + A +G + + ++ + Sbjct: 92 QIIMRRGATMMLHDPSGFASGMADEIAIAVRALDRIGAVMASIYAEQSGDDPDDLRKEMK 151 Query: 184 RDRFLSAPEAVEYGLV 199 + +L+ EAV+ G Sbjct: 152 AELWLTGEEAVKRGFA 167 >UniRef50_Q7P8G2 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Fusobacterium nucleatum subsp. vincentii ATCC 49256 RepID=Q7P8G2_FUSNV Length = 344 Score = 53.9 bits (128), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 41/146 (28%), Positives = 69/146 (47%), Gaps = 5/146 (3%) Query: 57 IVAQMLFLEAENPEKDI---YLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMG 113 + A ++ E EN DI LYINSPGG +T G +IY ++ K + GQ +S+ Sbjct: 32 VSADQVYKELENFGNDIDTINLYINSPGGSVTEGCAIYSALKRHKAVKNVYIDGQCSSIA 91 Query: 114 AFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREILKVKGRMNELMALHTGQ 173 + + AG K P + +MIH P+ G A ++ A + +K + + Sbjct: 92 SVIAMAG--DKIAMSPVATMMIHNPITALAGDAIELRKTAAILDIMKETIINAYVTKSHL 149 Query: 174 SLEQIERDTERDRFLSAPEAVEYGLV 199 S E+I + + + +A +A+E G Sbjct: 150 SREEISALMDTETYFTADQAIEKGFA 175 >UniRef50_B0MY38 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Alistipes putredinis DSM 17216 RepID=B0MY38_9BACT Length = 335 Score = 53.9 bits (128), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 35/136 (25%), Positives = 65/136 (47%), Gaps = 4/136 (2%) Query: 72 DIYLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNS 131 +I + I S GG + + IY+ + + + T C G AS + A ++G R ++ Sbjct: 99 EIVVNIRSTGGDVNDALLIYEALSSLDGHIVTRCYGYTASAATVIAQAASEGCREISAHA 158 Query: 132 RVMIHQPLGGYQGQATDIEIHAREILKVKGRMNELMALHTGQSLEQ----IERDTERDRF 187 +IH + +G A ++ + K R+ E+ A +G++ E+ + + R+ Sbjct: 159 LYLIHNSICTAEGNAEELATRIDLLRKTDARLAEVYAARSGRTPEEFTLLMAENNGSGRW 218 Query: 188 LSAPEAVEYGLVDSIL 203 LS EA+ GLVD I+ Sbjct: 219 LSPQEALAAGLVDRII 234 >UniRef50_Q0AG16 ATP-dependent Clp protease proteolytic subunit n=5 Tax=root RepID=Q0AG16_NITEC Length = 228 Score = 53.5 bits (127), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 41/130 (31%), Positives = 61/130 (46%), Gaps = 2/130 (1%) Query: 73 IYLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSR 132 I+L INSPGG + + +I ++ +V G AAS +++ A A + Sbjct: 45 IHLRINSPGGDVFSARAIETAIREHNSEVIAHIDGVAASAASYI--ALAADNIVIAEGAF 102 Query: 133 VMIHQPLGGYQGQATDIEIHAREILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPE 192 MIH+ G A D+ A + KV + A TGQ+ +QI + + SA E Sbjct: 103 YMIHKAWSFAMGNADDLLEMAALLEKVDESLVTTYAKRTGQAEDQIRDWMRNETWFSAAE 162 Query: 193 AVEYGLVDSI 202 AVEYG DS+ Sbjct: 163 AVEYGFADSV 172 >UniRef50_Q2NPI5 ClpP family protein n=3 Tax=unclassified Siphoviridae RepID=Q2NPI5_9CAUD Length = 245 Score = 53.5 bits (127), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 52/199 (26%), Positives = 95/199 (47%), Gaps = 8/199 (4%) Query: 11 APHMALVPMVIEQTSRGERSFDIYSRLL----KERVIFLTGQVEDHMANLIVAQM-LFLE 65 AP L P I ++ + +DI R +E IF +D AQ+ FLE Sbjct: 9 APEGRLDPDTISKSKEIQAKWDIAPRAAWRDGREINIFSVIGRDDLNDGTTSAQIGSFLE 68 Query: 66 AENPEKDIYLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKR 125 A P D+ + I+SPGG + AG++IY+ + + V+ +G+AAS + + +G + Sbjct: 69 AMGP-GDVTVNIDSPGGDMFAGLAIYNQLIAHQGKVTVNVVGRAASAASVIAMSGDQINM 127 Query: 126 FCLPNSRVMIHQPLGGYQGQATDIEIHAREILKVKGRMNELMALHTGQSLEQIERDTERD 185 ++ +MIH G A ++ A + M ++ + Q+ + + + + + Sbjct: 128 HT--SAFLMIHNCHLVIGGNAKELMSVAAMMEPFDSAMADIYVARSSQAKDTVVQMMDNE 185 Query: 186 RFLSAPEAVEYGLVDSILT 204 +++A EAV+ G DSI+T Sbjct: 186 TWMNAEEAVKMGFADSIVT 204 >UniRef50_C2BG30 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Anaerococcus lactolyticus ATCC 51172 RepID=C2BG30_9FIRM Length = 380 Score = 53.5 bits (127), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 39/147 (26%), Positives = 71/147 (48%), Gaps = 5/147 (3%) Query: 59 AQMLFLEAENPEKDIYLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLT 118 + + +LE E+ + + INS GG + A +IY ++ K G AAS + Sbjct: 46 SDLAYLEQEDINT-LIIRINSAGGDVFAATAIYSRLKEFKAKKIVKIDGWAASAATIIAM 104 Query: 119 AGAKGKRFCLPNSRVMIHQPLGGYQG--QATDIEIHAREILKVKGRMNELMALHTGQSLE 176 AG + + PN +MIH PL G +G A D+ + ++ +K + TG++ E Sbjct: 105 AGDEIE--IAPNGSLMIHDPLFGLEGYFNAKDLIKYIEQLETIKKSIINAYKTKTGKTEE 162 Query: 177 QIERDTERDRFLSAPEAVEYGLVDSIL 203 ++ + E + + + EAV+ G D ++ Sbjct: 163 ELAQLMEAETWYTGQEAVDAGFCDRLM 189 >UniRef50_B8D1N4 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Halothermothrix orenii H 168 RepID=B8D1N4_HALOH Length = 234 Score = 53.5 bits (127), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 39/132 (29%), Positives = 70/132 (53%), Gaps = 2/132 (1%) Query: 73 IYLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSR 132 I +++NS GG + ++I++ + K ++ I G AAS G+ +L AG K K + PNS Sbjct: 56 IIVHLNSTGGDLFQSVAIHNLFKDHKAEIIMINDGIAASGGSIILMAGDKIKFY--PNSI 113 Query: 133 VMIHQPLGGYQGQATDIEIHAREILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPE 192 +MIH G A AR++ K+ + E + + +++E+ + + +L+A E Sbjct: 114 MMIHAAHTITYGDAKYHREVARKLDKIDKSLKENYSQRFTGAEKELEKLIQEETWLTAKE 173 Query: 193 AVEYGLVDSILT 204 A E G D I++ Sbjct: 174 AKEKGFCDEIIS 185 >UniRef50_Q3RAG5 ATP-dependent Clp protease proteolytic subunit n=4 Tax=Xylella fastidiosa RepID=Q3RAG5_XYLFA Length = 771 Score = 53.1 bits (126), Expect = 6e-06, Method: Composition-based stats. Identities = 42/138 (30%), Positives = 66/138 (47%), Gaps = 15/138 (10%) Query: 73 IYLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSR 132 I++ INS GGV++ G++IY+ + + G AAS+ + + AG R PNS Sbjct: 77 IHVRINSNGGVVSDGLAIYNALTAHPATIHVTIDGVAASIASLIAQAGT--TRRVYPNSL 134 Query: 133 VMIHQPLGGYQGQATDIEIHAREILKVKGRMNELMALHTGQSL-----EQIER--DTERD 185 +MIH P G A D+ H +L A+HT + E I R + D Sbjct: 135 MMIHGPQTSGWGFAEDLR-HTAAMLDTMA-----AAMHTAYTTGATHPEAIRRMLNDGHD 188 Query: 186 RFLSAPEAVEYGLVDSIL 203 +L+A + + GL D+I+ Sbjct: 189 HWLTAQDMIAAGLADTII 206 >UniRef50_Q041N2 ATP-dependent Clp protease proteolytic subunit n=5 Tax=Bacteria RepID=Q041N2_LACGA Length = 223 Score = 52.8 bits (125), Expect = 8e-06, Method: Compositional matrix adjust. Identities = 52/178 (29%), Positives = 84/178 (47%), Gaps = 6/178 (3%) Query: 29 RSFDIYSRLLKERVIFLTGQV-EDHMANLIVAQMLFL-EAENPEKDIYLYINSPGGVITA 86 + F +S +RV+ + G + ED + V +F E + I L++NSPGG A Sbjct: 2 KRFWNWSGPQNQRVLTINGTIAEDSWVDDEVTPQVFQDELSQGKGPIDLWLNSPGGDCVA 61 Query: 87 GMSIYDTMQFIKPD-VSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQ 145 IY TM PD V+ G AAS + + AG K +P + +MIH PL GQ Sbjct: 62 ASRIY-TMLMNYPDNVNVKIDGIAASAASVIAMAGTKVS--MVPTAMIMIHNPLTIVGGQ 118 Query: 146 ATDIEIHAREILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEAVEYGLVDSIL 203 D++ A+ + + K + L T E+I + + +++ +A+E G D +L Sbjct: 119 KEDLDQAAQMLAETKESIINAYELKTNLPREKISSMMDDETWMNVNKAIELGFADDML 176 >UniRef50_C5R880 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Weissella paramesenteroides ATCC 33313 RepID=C5R880_WEIPA Length = 242 Score = 52.4 bits (124), Expect = 8e-06, Method: Compositional matrix adjust. Identities = 37/132 (28%), Positives = 63/132 (47%), Gaps = 2/132 (1%) Query: 69 PEKDIYLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCL 128 P K I + INSPGG + G++IY+ ++ V+ G AAS+ + + AG Sbjct: 45 PVKTINMSINSPGGSVFDGIAIYNMLKKNPATVNVTVEGLAASIASVIAMAG--DTLTMD 102 Query: 129 PNSRVMIHQPLGGYQGQATDIEIHAREILKVKGRMNELMALHTGQSLEQIERDTERDRFL 188 S +MIH P G A+++ A + +++ + TG E I+ + + +L Sbjct: 103 TGSMLMIHNPFTMAVGNASELREMADTLDQIRESSVNIYHEKTGIDKEAIKSVMDNETWL 162 Query: 189 SAPEAVEYGLVD 200 +A EA+ G D Sbjct: 163 TADEAITAGWAD 174 >UniRef50_Q3EL78 ATP-dependent Clp protease proteolytic subunit n=3 Tax=Bacillus cereus group RepID=Q3EL78_BACTI Length = 244 Score = 52.0 bits (123), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 37/132 (28%), Positives = 71/132 (53%), Gaps = 6/132 (4%) Query: 68 NPEKDIYLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFC 127 + + ++ +Y+NS GG + AG++IY+ ++ K + G AAS+ + + A G R Sbjct: 60 DDKSNLNIYVNSGGGSVFAGLAIYNMLKRNKAQKTVYVDGVAASIASVIALA---GDRVV 116 Query: 128 LP-NSRVMIHQPLGGYQGQATDIEIHAREILKVK-GRMNELMA-LHTGQSLEQIERDTER 184 +P N+ +M+H+P +G A + A ++ ++ G MN L G +E I++ + Sbjct: 117 VPSNAFLMVHKPWTVSRGNANVLRKMAEDLDNLEAGIMNVYKENLKEGIEMEVIQQLVDA 176 Query: 185 DRFLSAPEAVEY 196 + +LS EA +Y Sbjct: 177 ETWLSGEEAEKY 188 >UniRef50_A3F644 Head maturation protease n=3 Tax=root RepID=A3F644_9CAUD Length = 268 Score = 51.6 bits (122), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 38/141 (26%), Positives = 67/141 (47%), Gaps = 3/141 (2%) Query: 63 FLEAENPEKDIYLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAK 122 FL++ E DI + +NS GG + G IY ++ +V + G AAS+ + ++ AG Sbjct: 35 FLDSAGGE-DIQVRLNSGGGEVFVGSEIYSALKDYPGNVEVVITGLAASIASIIMLAGDV 93 Query: 123 GKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREILKVKGRMNELMALHTGQSLEQIERDT 182 K P +++MIH G G ++ + + + + A TG+ +I Sbjct: 94 IK--ASPMAQIMIHNASWGSYGDYRQLKHDSEVVENASISLAGMYARKTGKQETEIRELL 151 Query: 183 ERDRFLSAPEAVEYGLVDSIL 203 + + + +A A E GL+D IL Sbjct: 152 DAETWFTANSAKEIGLIDDIL 172 >UniRef50_C3WVP2 ATP-dependent Clp protease proteolytic subunit n=2 Tax=Fusobacterium RepID=C3WVP2_9FUSO Length = 367 Score = 51.6 bits (122), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 39/144 (27%), Positives = 68/144 (47%), Gaps = 16/144 (11%) Query: 73 IYLYINSPGGVITAGMSIYDTMQ-FIKPD---VSTICMGQAASMGAFLLTAGAK-----G 123 I L +NSPGG + +IY+ ++ F K + ++ G AAS +FL+ +K G Sbjct: 57 INLRVNSPGGDVFEASAIYNLLKDFAKVNNIQITGYIDGLAASAASFLILCASKIVMGIG 116 Query: 124 KRFCLPNSRVMIHQPLGGYQGQATDIEIHAREILKVKGRMNELMALHTGQSLEQIERDTE 183 F MIH PL G + +++ + VK + ++ + S E+I Sbjct: 117 ALF-------MIHNPLTYAYGNSIELQKQIELLDTVKESILDIYCTKSKLSREEIAEKMN 169 Query: 184 RDRFLSAPEAVEYGLVDSILTHRN 207 +++ A EA+E G +D I+ + N Sbjct: 170 NEKWFRANEALEAGFIDEIVENDN 193 >UniRef50_A8TF02 Peptidase S14 ClpP n=1 Tax=Methanococcus voltae A3 RepID=A8TF02_METVO Length = 190 Score = 51.6 bits (122), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 37/132 (28%), Positives = 64/132 (48%), Gaps = 6/132 (4%) Query: 75 LYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVM 134 L I+SPGG +TAG+S Y+ ++ I V+T G S+G + AG +R+ P SR + Sbjct: 46 LLISSPGGDVTAGLSAYNYLKGIPAYVTTHNFGSVDSIGIVIFCAGQ--ERYASPQSRFL 103 Query: 135 IHQPLGGYQGQAT----DIEIHAREILKVKGRMNELMALHTGQSLEQIERDTERDRFLSA 190 IH + + DIE + + ++++++ ++ QI+ L+ Sbjct: 104 IHDVRSVFSSTSNLGEKDIEERLKSLKVDMENISKVISSNSNLEASQIQEFMLERTTLNP 163 Query: 191 PEAVEYGLVDSI 202 EAV GL+ I Sbjct: 164 EEAVNMGLITEI 175 >UniRef50_UPI00017438C7 ATP-dependent Clp protease, proteolytic subunit n=1 Tax=candidate division TM7 single-cell isolate TM7a RepID=UPI00017438C7 Length = 62 Score = 51.2 bits (121), Expect = 2e-05, Method: Composition-based stats. Identities = 24/51 (47%), Positives = 38/51 (74%) Query: 153 AREILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEAVEYGLVDSIL 203 ++EI ++K +++++ TG+S+E+I DTERD F+S EAV YGL+D IL Sbjct: 12 SKEIERMKEITSKILSEATGKSVEEIYADTERDNFMSPEEAVNYGLIDKIL 62 >UniRef50_B8ILU4 ATP-dependent Clp protease proteolytic subunit n=2 Tax=Proteobacteria RepID=B8ILU4_METNO Length = 237 Score = 50.8 bits (120), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 38/128 (29%), Positives = 61/128 (47%), Gaps = 2/128 (1%) Query: 73 IYLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSR 132 I+L +NSPGG + A ++ ++ K V G AAS +FL+ A + + Sbjct: 61 IHLRLNSPGGDVFAARAMKTALEQHKAKVVAHIDGVAASAASFLMLAA--DEIAIADGAF 118 Query: 133 VMIHQPLGGYQGQATDIEIHAREILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPE 192 VMIH+P G A ++ A + KV + TG+S E++ + + + SA E Sbjct: 119 VMIHEPWSLALGTADEMRASADLLDKVGEAIAADYQRRTGKSAEEVAAWMKAETWFSADE 178 Query: 193 AVEYGLVD 200 A+E G D Sbjct: 179 AIENGFAD 186 >UniRef50_B4D6M6 Peptidase S14 ClpP n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D6M6_9BACT Length = 439 Score = 50.4 bits (119), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 36/141 (25%), Positives = 66/141 (46%), Gaps = 3/141 (2%) Query: 37 LLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYIN-SPGGVITAGMSIYDTMQ 95 +L +R I L G + A+ + +++ + +N + I++ I+ SPGG + AG I ++M Sbjct: 201 VLTDRRIPLNGLISPATADFVCSRIDYFNNKNKDWPIFIVIDDSPGGSVMAGNKILESMH 260 Query: 96 FIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHARE 155 V + AASM A + T + + PN+ ++ HQ G G T+ + Sbjct: 261 SSTAPVYVVVKTFAASMAATIATLAPRS--YAYPNAVILHHQISNGMMGNLTEQREGLKN 318 Query: 156 ILKVKGRMNELMALHTGQSLE 176 + + RM +A G S + Sbjct: 319 LEQWWKRMATPIAAKMGISTD 339 >UniRef50_B2TQV1 ATP-dependent Clp protease proteolytic subunit n=2 Tax=Clostridium botulinum RepID=B2TQV1_CLOBB Length = 247 Score = 50.4 bits (119), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 43/173 (24%), Positives = 80/173 (46%), Gaps = 7/173 (4%) Query: 33 IYSRLLKERVIFLTGQ-VEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIY 91 IY + + + TG+ +E + + Q+L E+ +I LYINS GG + G+ IY Sbjct: 22 IYDNVEGDSYNWWTGEKMESETSANYIKQVL--ESNQSTSEINLYINSYGGEVKEGLGIY 79 Query: 92 DTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEI 151 + ++ V+ G A S+ + + G K N+ +MIH G G A ++ Sbjct: 80 NQLKRHPAQVNVYIDGFACSIASVIAMVG--DKVVMGTNALMMIHHASIGCYGNAEELRK 137 Query: 152 HAREILKVKGRMNELMALHTGQSLEQ--IERDTERDRFLSAPEAVEYGLVDSI 202 A ++ + G+ L++ +++ + +L+A + +EYGL D I Sbjct: 138 AANDVEVIDQASCSSYLTKAGEKLDEATLKQLLDNQTWLNASQCLEYGLCDEI 190 >UniRef50_Q01F40 Clp protease 2 proteolytic subunit (ISS) n=1 Tax=Ostreococcus tauri RepID=Q01F40_OSTTA Length = 87 Score = 50.4 bits (119), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 25/72 (34%), Positives = 40/72 (55%), Gaps = 9/72 (12%) Query: 61 MLFLEAENPEKDIYLYINSPGGVITAGMSIYDTMQFI-------KPDVSTICMGQAASMG 113 M +L +DI LYINSPGG +TAGM+++DTM+ + P ++ C ++ Sbjct: 1 MKYLAHSARCRDITLYINSPGGSVTAGMAVFDTMRHVHASLTPFSPTINLCC--KSCDPP 58 Query: 114 AFLLTAGAKGKR 125 F L+ ++ KR Sbjct: 59 RFALSCNSRKKR 70 >UniRef50_A7DYB1 Putative uncharacterized protein n=1 Tax=Streptococcus phage M102 RepID=A7DYB1_9CAUD Length = 298 Score = 50.4 bits (119), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 37/145 (25%), Positives = 71/145 (48%), Gaps = 2/145 (1%) Query: 58 VAQMLFLEAENPEKDIYLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLL 117 +A+ + + N E DI L +NS GG AG IY ++ ST + A + +L Sbjct: 29 IAEDIISDIRNSEDDITLILNSGGGSYFAGAEIYSELK-ASNQKSTAYIASLAGSASAIL 87 Query: 118 TAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREILKVKGRMNELMALHTGQSLEQ 177 GA KR ++++M HQ G G++ D++ ++ + + + E++ ++ + ++ Sbjct: 88 AMGAT-KRVISESAQLMFHQSAIGAFGKSQDLKEVSQMLDSIDAGIAEVLTANSSLTKDE 146 Query: 178 IERDTERDRFLSAPEAVEYGLVDSI 202 + D F+ A A++ LVD I Sbjct: 147 AKDFISTDNFVDAQRALDLKLVDEI 171 >UniRef50_A3X5R0 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Roseobacter sp. MED193 RepID=A3X5R0_9RHOB Length = 326 Score = 50.1 bits (118), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 38/131 (29%), Positives = 65/131 (49%), Gaps = 4/131 (3%) Query: 73 IYLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLP-NS 131 I L +NSPGG + ++IY+ ++ +++ G AAS G +P N+ Sbjct: 45 IDLRLNSPGGSVFDAVAIYNALKRHAGEITVWIDGIAASA---ASYIAMAGDAIVMPENA 101 Query: 132 RVMIHQPLGGYQGQATDIEIHAREILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAP 191 +MIH P G G A D+ A + KVKG + + A +G+ ++I + +L A Sbjct: 102 FLMIHDPSGLVMGTAEDMRATAEALDKVKGSLIQGYAGKSGKPDDEIAALMAAETWLDAK 161 Query: 192 EAVEYGLVDSI 202 +A++ G +D I Sbjct: 162 DALDLGFIDRI 172 >UniRef50_Q3LVU8 Clp protease n=1 Tax=Bigelowiella natans RepID=Q3LVU8_BIGNA Length = 204 Score = 50.1 bits (118), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 38/175 (21%), Positives = 84/175 (48%), Gaps = 23/175 (13%) Query: 28 ERSFDIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSP-----GG 82 ++ +DI S++ ++ +IF+ + + L+++Q++FL + ++IN+P Sbjct: 31 KKFYDISSKIYEKNIIFIGQPINTFIVQLLISQVIFLFMNRKNEKNRIFINTPYQTKNNF 90 Query: 83 VITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGY 142 + T+ + +Y+ +Q I+ + S+ +G +L++G K R+ L NS V+ Sbjct: 91 LYTSDLYLYNFLQTIRFEYSSYNIGLCNYDIGLILSSGIKSNRYGLKNSIVLF------- 143 Query: 143 QGQATDIEIHAREILKVKGRMNELMALHTGQSL--EQIERDTERDRFLSAPEAVE 195 T+ EI+++ I K + L Q+L I ++T+ PE ++ Sbjct: 144 ----TETEINSKRISNKKDTVTFWKDLLYKQNLIIYNISKETQL-----KPETIK 189 >UniRef50_B5A4F4 Chloroplast ATP-dependent Clp protease proteolytic subunit 4 n=1 Tax=Gymnochlora stellata RepID=B5A4F4_GYMST Length = 184 Score = 49.7 bits (117), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 38/172 (22%), Positives = 74/172 (43%), Gaps = 8/172 (4%) Query: 40 ERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLY---INSPGGV----ITAGMSIYD 92 + +I+L Q+ ++++ + + I +Y N+ + I SIYD Sbjct: 12 KNIIYLNDQINIENLKFFTGKLIYFKKNKTKGIINIYHGKTNNKFAISDNKIDVVTSIYD 71 Query: 93 TMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQ-GQATDIEI 151 M + T C+G A +++ G K R+ L NS + Y+ A + + Sbjct: 72 LMNIYGNQIHTTCLGIAEDEFGLIMSFGKKKSRYSLINSTFYFNNLSMYYKYDNALSLGL 131 Query: 152 HAREILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEAVEYGLVDSIL 203 + EI K M +++ T + + + +FLS+ EA E G++D+I+ Sbjct: 132 YKSEIQKQFFVMLNILSSQTSKPVVYLWEYYSYPKFLSSIEAKELGIIDTII 183 >UniRef50_B7UZW7 ATP-dependent Clp protease proteolytic subunit n=20 Tax=root RepID=B7UZW7_PSEA8 Length = 296 Score = 49.7 bits (117), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 37/135 (27%), Positives = 65/135 (48%), Gaps = 8/135 (5%) Query: 72 DIYLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAK---GKRFCL 128 D+ + INSPGG + G++IY+ ++ K V+ +G AAS +F+ AG + G+ L Sbjct: 79 DVTVNINSPGGDVFEGLAIYNLLREHKGKVTVNIIGLAASAASFIAMAGDEIRIGRAAFL 138 Query: 129 PNSRVMIHQPLGGYQGQATDIEIHAREILKVKGRMNELMALHTGQSLEQIERDTERDRFL 188 MIH G D+ A + + ++ A TG ++ I + + + ++ Sbjct: 139 -----MIHNAWLIAMGNRNDLREIADWLEPFDMTLADIYAQRTGIDIDDIVKQMDAETWI 193 Query: 189 SAPEAVEYGLVDSIL 203 EAV+ G D+ L Sbjct: 194 GGREAVDKGWADAFL 208 >UniRef50_Q72BY3 ClpP protease family protein n=2 Tax=Desulfovibrio vulgaris RepID=Q72BY3_DESVH Length = 244 Score = 49.7 bits (117), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 39/130 (30%), Positives = 61/130 (46%), Gaps = 2/130 (1%) Query: 73 IYLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSR 132 I+L INSPGG + A + ++ V G AAS +F+ A A P + Sbjct: 63 IHLRINSPGGEVFAARCMEAAIKGHPAKVIAHVDGYAASAASFV--AIACDDVLMAPGAF 120 Query: 133 VMIHQPLGGYQGQATDIEIHAREILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPE 192 +MIH+ G + D+ A + K+ G + E + G+S+ + + + +A E Sbjct: 121 MMIHKAWVFTAGNSDDLIQTASLLEKLDGTLAETYSQKCGKSVSDMAEMMAAETWFTAQE 180 Query: 193 AVEYGLVDSI 202 AVE GL DSI Sbjct: 181 AVEAGLADSI 190 >UniRef50_C0A810 Peptidase S14 ClpP n=1 Tax=Opitutaceae bacterium TAV2 RepID=C0A810_9BACT Length = 478 Score = 49.7 bits (117), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 39/140 (27%), Positives = 64/140 (45%), Gaps = 3/140 (2%) Query: 38 LKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYIN-SPGGVITAGMSIYDTMQF 96 + +R I L G + A+ I ++ + +N E I++ I+ SPGG + AG I M+ Sbjct: 242 ISDRRIPLNGPISMRTADRIQERIDYFNNQNTEYPIFIVIDASPGGSVMAGYKILKAMEG 301 Query: 97 IKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREI 156 V T+ AASM A + T + + PN+ ++ HQ G T+ RE+ Sbjct: 302 SAAPVYTVVKSFAASMAAGITTLSKQS--YAYPNAILLHHQIWTSSGGNLTEQREGVREL 359 Query: 157 LKVKGRMNELMALHTGQSLE 176 + R+ +A G LE Sbjct: 360 EEWWRRLAAPIAAKMGIGLE 379 >UniRef50_C7D0Z8 ATP-dependent Clp protease proteolytic subunit n=6 Tax=Enterococcus RepID=C7D0Z8_ENTFA Length = 253 Score = 49.7 bits (117), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 42/139 (30%), Positives = 67/139 (48%), Gaps = 9/139 (6%) Query: 68 NPEKDIYLYINSPGGVITAGMSIYDTMQFIKP--DVSTICMGQAASMGAFLLTAGAKGKR 125 N +D+ + INS GG++ G IY ++ + V+ + G AAS + A A Sbjct: 38 NHNEDVEVTINSYGGLVDMGNEIYTALRSYEGHVKVNVVMAGSAAS-----IIAMAGNTV 92 Query: 126 FCLPNSRVMIHQPLGGYQGQATDIEIHAREIL-KVKGRMNELMALHTGQSLEQIERDTER 184 P ++MIH G G ++ A EIL K + TG++ E+I ++ Sbjct: 93 AISPVGQIMIHNVAMGAGGDYHTMD-KASEILQKANNSLANAYVSKTGKAKEEILALMDK 151 Query: 185 DRFLSAPEAVEYGLVDSIL 203 + +L+A EAVE G VD I+ Sbjct: 152 ETWLTAEEAVENGFVDEIM 170 >UniRef50_A8RU31 ATP-dependent Clp protease proteolytic subunit n=3 Tax=Clostridiales RepID=A8RU31_9CLOT Length = 259 Score = 49.3 bits (116), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 39/137 (28%), Positives = 68/137 (49%), Gaps = 11/137 (8%) Query: 66 AENPEKDIYLYINSPGGVITAGMSIYDTM---QFIKPDVSTICMGQAASMGAFLLTAGAK 122 AE +D+ +YINS GG + AG++IY+ + Q K G AS+ F+ Sbjct: 65 AEANGRDLNIYINSGGGSVFAGIAIYNMLKRYQGKKHCFVDALAGSIASLFPFV-----D 119 Query: 123 GKRFCLP-NSRVMIHQPLGGYQGQATDIEIHAREILKVKGRMNELMALH--TGQSLEQIE 179 + +P N+ +MIH+P +G A ++ A + ++ + + H G ++EQI+ Sbjct: 120 SDKPTIPKNAYLMIHKPWCDCEGNANELRKMADTLEAIEAGIWSIYEEHLAEGVTIEQIK 179 Query: 180 RDTERDRFLSAPEAVEY 196 E + +LS EA +Y Sbjct: 180 ELMEAETWLSGEEAAKY 196 >UniRef50_UPI0001B52F96 putative Clp protease n=1 Tax=Fusobacterium sp. D11 RepID=UPI0001B52F96 Length = 370 Score = 48.9 bits (115), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 38/139 (27%), Positives = 62/139 (44%), Gaps = 6/139 (4%) Query: 73 IYLYINSPGGVITAGMSIY----DTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCL 128 I L +NSPGG + +IY D + +++ G AAS +FL+ K Sbjct: 57 INLRVNSPGGDVFEASAIYNLLKDYAKVNNIEITGYIDGLAASAASFLVLCATK--VIMG 114 Query: 129 PNSRVMIHQPLGGYQGQATDIEIHAREILKVKGRMNELMALHTGQSLEQIERDTERDRFL 188 + MIH PL G A ++ + VK + ++ + S E+I +++ Sbjct: 115 TGALYMIHNPLTSAYGNAEKLKKQIELLDTVKEAILDIYCTKSKLSREEISEKMNGEKWY 174 Query: 189 SAPEAVEYGLVDSILTHRN 207 A EA+E G VD I+ + N Sbjct: 175 RASEALEAGFVDEIVENDN 193 >UniRef50_B1RAB0 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Clostridium perfringens B str. ATCC 3626 RepID=B1RAB0_CLOPE Length = 255 Score = 48.5 bits (114), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 38/135 (28%), Positives = 66/135 (48%), Gaps = 11/135 (8%) Query: 75 LYINSPGGVITAGMSIYDTMQFIKPDVSTICM---GQAASMGAFLLTAGAKGKRFCLP-N 130 +YINSPGG + G +I++ ++ K D I + G AAS+ + + AG +P N Sbjct: 56 VYINSPGGDVFEGYAIFNVLRR-KADNCQINVYIDGMAASIASVIAMAGT---HISMPSN 111 Query: 131 SRVMIHQPLGGYQGQATDIEIHAREILKVKGRMNELMALHTGQSLEQIERD---TERDRF 187 + +MIH+ G G + + + + K+ M + + L+ D + D + Sbjct: 112 AVMMIHRASIGIYGNSDVLAKGIKFLEKIDNNMKQTYINRSNGKLDDSTLDFLFSNGDTW 171 Query: 188 LSAPEAVEYGLVDSI 202 L+A E +EYGL D + Sbjct: 172 LTAQECLEYGLCDEV 186 >UniRef50_A2RFI0 ATP-dependent Clp protease proteolytic subunit n=8 Tax=Streptococcus RepID=A2RFI0_STRPG Length = 221 Score = 48.5 bits (114), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 43/135 (31%), Positives = 68/135 (50%), Gaps = 5/135 (3%) Query: 72 DIYLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNS 131 DI L +NS GG++T G +Y ++ K V+ G AAS A + GA K P + Sbjct: 43 DIILEVNSNGGLVTVGSEVYTALRNYKGKVTAEITGMAASA-ASVAVMGAD-KVVMSPTA 100 Query: 132 RVMIHQPLGGYQGQATDIEIHAREILKV--KGRMNELMALHTGQSLEQIERDTERDRFLS 189 ++M+H+ L + +D A LK K +N +A TG S ++I + F+S Sbjct: 101 QMMVHKALFNWVAGNSDDLDKASNALKSSDKAIVNAYVA-KTGLSEDEIMNLMRNETFMS 159 Query: 190 APEAVEYGLVDSILT 204 A +AVE G D +++ Sbjct: 160 AQDAVEKGFADEVMS 174 >UniRef50_A5C4G8 Putative uncharacterized protein (Fragment) n=1 Tax=Vitis vinifera RepID=A5C4G8_VITVI Length = 443 Score = 48.5 bits (114), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 19/30 (63%), Positives = 26/30 (86%) Query: 81 GGVITAGMSIYDTMQFIKPDVSTICMGQAA 110 GG +TAGM+I+DTM+ I+PDV T+C+G AA Sbjct: 218 GGXVTAGMAIFDTMRHIRPDVPTVCVGLAA 247 >UniRef50_A7GI71 ATP-dependent Clp protease proteolytic subunit n=15 Tax=Firmicutes RepID=A7GI71_CLOBL Length = 266 Score = 48.5 bits (114), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 41/143 (28%), Positives = 75/143 (52%), Gaps = 18/143 (12%) Query: 63 FLEAENPEKDIYLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAK 122 FL+ + K++ +YINS GG + AG++IY ++ + G AAS+ + + G K Sbjct: 62 FLKEIDNNKELDIYINSGGGSVFAGLAIYHQLKRHNGFKTVHVDGLAASITSVIALVGDK 121 Query: 123 GKRFCLPN-SRVMIHQP----LGG---YQGQATDIEIHAREILKV-KGRMNELMALHTGQ 173 +P ++ MIH+P LG ++ QA D++I ILK+ + +NE G Sbjct: 122 ---VVIPAPAQFMIHKPWTIALGNANEFRKQANDLDIAEESILKIYEANLNE------GV 172 Query: 174 SLEQIERDTERDRFLSAPEAVEY 196 ++E I++ + +++ +A EY Sbjct: 173 NIETIKQLMADETWMTGEKAAEY 195 >UniRef50_B2V4L4 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Clostridium botulinum E3 str. Alaska E43 RepID=B2V4L4_CLOBA Length = 263 Score = 48.5 bits (114), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 35/133 (26%), Positives = 67/133 (50%), Gaps = 4/133 (3%) Query: 73 IYLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSR 132 I +++NS GG + M+I + + +++ I G AAS +F+LT K + N+ Sbjct: 60 INVFVNSYGGSVYEAMAIRNQLMRHSANITGIVDGFAASAASFILTGCNYVKMY--SNTM 117 Query: 133 VMIHQPLGGYQGQATDIEIHAREILKV-KGRMNELMALHTGQSLEQIERD-TERDRFLSA 190 MIH G A ++ A ++ K+ +G + G+ E+I + E + +L+A Sbjct: 118 QMIHNMWMPACGNANELRKSADDLDKIMEGNRQAYLQKSNGKLTEEILIELLENETWLTA 177 Query: 191 PEAVEYGLVDSIL 203 + ++YGL D ++ Sbjct: 178 EDCLKYGLCDEVI 190 >UniRef50_B9QT01 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Labrenzia alexandrii DFL-11 RepID=B9QT01_9RHOB Length = 342 Score = 48.1 bits (113), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 33/131 (25%), Positives = 59/131 (45%), Gaps = 2/131 (1%) Query: 70 EKDIYLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLP 129 + D+ + +NS GG + G SIY+ ++ DV+ G AAS + + AG K Sbjct: 39 QNDLTVRLNSGGGYVDDGRSIYNALKVHGGDVTVFVDGVAASSASLIAMAG--DKIVMRS 96 Query: 130 NSRVMIHQPLGGYQGQATDIEIHAREILKVKGRMNELMALHTGQSLEQIERDTERDRFLS 189 + +MIH P G A D ++ + + + + A +G + + + +++ Sbjct: 97 GALMMIHDPATITVGTADDHDVSKQALERTAESFADTYAARSGNDAKDVRAAMKATTWMT 156 Query: 190 APEAVEYGLVD 200 A EAV G D Sbjct: 157 ADEAVAAGYAD 167 >UniRef50_A1VPI3 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Polaromonas naphthalenivorans CJ2 RepID=A1VPI3_POLNA Length = 674 Score = 47.8 bits (112), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 41/163 (25%), Positives = 75/163 (46%), Gaps = 5/163 (3%) Query: 43 IFLTGQVEDHMANLIVAQMLFLEAENP--EKDIYLYINSPGGVITAGMSIYDTMQFIKPD 100 I++ G + + V+ F++ N I + INS GG + G++IY+ ++ K + Sbjct: 30 IYIYGDIGESWYEETVSAATFVKELNDIDATAITVRINSIGGSVPDGLAIYNALRRHKAE 89 Query: 101 VSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREILKVK 160 V+ G A S+ + + AG K N+ +MIH P G + ++ A ++ Sbjct: 90 VTIEIDGMALSVASLIAMAGDKVN--MANNAMLMIHGPWSYVSGNSVELRDMADQLDTWA 147 Query: 161 GRMNELMALHTGQSLEQIERDTE-RDRFLSAPEAVEYGLVDSI 202 M+ A TG + T+ +D F +A +A+ VD+I Sbjct: 148 AAMSNSYAARTGDQPAMLALLTDGKDHFYTAEQALAEKFVDAI 190 >UniRef50_B7HV38 ATP-dependent Clp protease proteolytic subunit n=11 Tax=root RepID=B7HV38_BACC7 Length = 248 Score = 47.8 bits (112), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 40/134 (29%), Positives = 67/134 (50%), Gaps = 10/134 (7%) Query: 73 IYLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLP-NS 131 I+++INS GG G++I + ++ ++ G AAS + + AG K +P N+ Sbjct: 59 IHVHINSGGGSAFDGVAICNQLKQHNAEIIVHIDGWAASAASVIAMAGDK---IIMPSNT 115 Query: 132 RVMIHQPLGGYQGQATDIEIHAREILKVKGRMNELMA---LHTGQSLEQIERDTERDRFL 188 +MIHQ G A E AR++ K+ + + T + L+Q+ +D + +L Sbjct: 116 MMMIHQASTFEYGNADLFEKTARDLRKIDSALAASYKKRFVGTDEELKQLLKD---ETWL 172 Query: 189 SAPEAVEYGLVDSI 202 +A EAV GL D I Sbjct: 173 TAEEAVALGLADEI 186 >UniRef50_B2V2A3 Peptidase S14, ClpP n=1 Tax=Clostridium botulinum E3 str. Alaska E43 RepID=B2V2A3_CLOBA Length = 377 Score = 47.4 bits (111), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 36/135 (26%), Positives = 62/135 (45%), Gaps = 6/135 (4%) Query: 72 DIYLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNS 131 +I + INS GG + +IY ++ K ++ G A S + AG K +P++ Sbjct: 52 NITVRINSNGGDVFTASAIYTLLKDCKASITVKIDGMAMSAATVVAMAGDK---VLIPST 108 Query: 132 RV-MIHQPLGGYQG--QATDIEIHAREILKVKGRMNELMALHTGQSLEQIERDTERDRFL 188 + MIH PL G G +D+E + VK + T ++ E+IE + +L Sbjct: 109 SIFMIHDPLAGLCGYYNVSDLEKVINRLSVVKNTIINAYINKTDKTKEEIEDLMTNELWL 168 Query: 189 SAPEAVEYGLVDSIL 203 + +AV G D ++ Sbjct: 169 TGEDAVNEGFCDEVM 183 >UniRef50_B1MZD0 ATP-dependent Clp protease proteolytic subunit n=4 Tax=root RepID=B1MZD0_LEUCK Length = 229 Score = 47.4 bits (111), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 33/133 (24%), Positives = 65/133 (48%), Gaps = 2/133 (1%) Query: 72 DIYLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNS 131 D+ + INS GG + A IY ++ V T A S + + AG K + P + Sbjct: 42 DLEIGINSGGGEVDAANEIYTALRNYPGKVITQIESSAYSAASIIAMAGDKVQ--ISPVA 99 Query: 132 RVMIHQPLGGYQGQATDIEIHAREILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAP 191 ++MIH G D++ + + + + ++ TG+ +E+ +++ +++A Sbjct: 100 QLMIHNASTYAGGNHNDLDKTSNALKSTDKAIAKAYSVKTGRPVEEFLALMDKETWINAD 159 Query: 192 EAVEYGLVDSILT 204 +A+E GLVD ++T Sbjct: 160 DALELGLVDEVMT 172 >UniRef50_A1VKV0 ATP-dependent Clp protease proteolytic subunit n=2 Tax=Betaproteobacteria RepID=A1VKV0_POLNA Length = 641 Score = 47.0 bits (110), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 40/152 (26%), Positives = 73/152 (48%), Gaps = 7/152 (4%) Query: 54 ANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMG 113 A I +Q+ +++ P + + INS GG ++ ++IY+ ++ K V+ +G A S Sbjct: 18 AENIRSQLSYIDDATP---LIVEINSEGGSVSEAVAIYNLLRTWKGGVTVEIVGWALSAA 74 Query: 114 AFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREILKVKGRMNELMALHTGQ 173 + AG + K S +M+H P G A + +A + +V M A T Q Sbjct: 75 TVIAMAGQRIKAHA--TSLIMVHAPWTNASGNAGAMRENAALLDQVALTMQAAYA-RTRQ 131 Query: 174 SLEQIERDTE-RDRFLSAPEAVEYGLVDSILT 204 + + + +D + +A EA+ GLVD I++ Sbjct: 132 PAKTLAAWMDGQDHWFTAQEALALGLVDEIIS 163 >UniRef50_A7BZX9 Secreted protein n=2 Tax=Beggiatoa sp. PS RepID=A7BZX9_9GAMM Length = 476 Score = 47.0 bits (110), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 37/130 (28%), Positives = 61/130 (46%), Gaps = 7/130 (5%) Query: 37 LLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYIN-SPGGVITAGMSIYDTMQ 95 ++ +R I L G + AN IV ++ + ++ E I+L I+ PGG + G I M+ Sbjct: 247 IISDRKIVLDGIIWPGTANNIVERIQYYNNKSTEYPIFLVIDYCPGGSVMEGTRIVKAMK 306 Query: 96 FIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHARE 155 + V + AASM A + T + LP++ ++ HQ G G T+ RE Sbjct: 307 KSRAPVYVVVKALAASMAAVITTLADHS--YALPDAIIVHHQVWGMSFGNRTE----QRE 360 Query: 156 ILKVKGRMNE 165 LK+ +E Sbjct: 361 QLKIIDEWSE 370 >UniRef50_A8Z285 ATP-dependent Clp protease proteolytic subunit n=34 Tax=root RepID=A8Z285_STAAT Length = 257 Score = 47.0 bits (110), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 35/134 (26%), Positives = 69/134 (51%), Gaps = 5/134 (3%) Query: 72 DIYLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNS 131 +I ++INS GG + G +IY+ ++ ++ AAS+ + + +G F NS Sbjct: 53 EIDVHINSSGGSVFEGHAIYNMLKMHPAKINIYVDALAASIASVIAMSG--DTIFMHKNS 110 Query: 132 RVMIHQPLGGYQGQATDIEIHAREILKVKGRMNELMALHTGQSLEQ--IERDTERDRFLS 189 +MIH G A ++ A ++L+ ++ L + L+Q +++ + + +L+ Sbjct: 111 FLMIHNSWVMTVGNAEELRKTA-DLLEKTDAVSNSAYLDKAKDLDQEHLKQMLDAETWLT 169 Query: 190 APEAVEYGLVDSIL 203 A EA+ +GL+D IL Sbjct: 170 AEEALSFGLIDEIL 183 >UniRef50_C6IMG9 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Bacteroides sp. 1_1_6 RepID=C6IMG9_9BACE Length = 353 Score = 47.0 bits (110), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 41/137 (29%), Positives = 63/137 (45%), Gaps = 12/137 (8%) Query: 71 KDIYLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLP- 129 KD+++YINSPGG I + ++ ++ AS ++ F +P Sbjct: 43 KDVHIYINSPGGECFEANEIVNVIKKFPGKITGEGGALVASAATYI---AINCTSFSMPA 99 Query: 130 NSRVMIHQPLGGYQGQATDIEIHAREILKVKGRMNE--LMALHTGQSLEQIERDTER--D 185 N MIHQ GG G+ DIE L+V ++NE L A + + ++ RD D Sbjct: 100 NGLFMIHQVSGGACGRVADIE----SALEVMRKLNEHYLNAFLSKCTDKKKIRDAWEKGD 155 Query: 186 RFLSAPEAVEYGLVDSI 202 ++SA EA E G V + Sbjct: 156 YWMSAQEAKENGFVTEV 172 >UniRef50_Q1QKR7 ATP-dependent Clp protease proteolytic subunit n=2 Tax=Alphaproteobacteria RepID=Q1QKR7_NITHX Length = 351 Score = 47.0 bits (110), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 34/131 (25%), Positives = 66/131 (50%), Gaps = 8/131 (6%) Query: 70 EKDIYLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLP 129 + D+ + +NS GG++ ++IY+ + K V+ AAS + AG + Sbjct: 39 DNDLTVRLNSGGGIVNDAIAIYNALSTHKGKVTIQVDAIAASAATVIAMAGQ--EIVMRV 96 Query: 130 NSRVMIHQPLGGYQGQATDIEIHAREILKVKGRMNELMALH---TGQSLEQIERDTERDR 186 S +MIH P+ G +IE H + I ++ N++ +++ +G L+ + D + + Sbjct: 97 GSIMMIHDPMNVTFG---NIEDHEKTIEQLTAYANQMASIYAERSGNELDDVRSDMKAEI 153 Query: 187 FLSAPEAVEYG 197 +L+A +AVE G Sbjct: 154 WLTAEQAVEKG 164 >UniRef50_UPI00017450C3 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Verrucomicrobium spinosum DSM 4136 RepID=UPI00017450C3 Length = 462 Score = 46.6 bits (109), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 36/143 (25%), Positives = 68/143 (47%), Gaps = 3/143 (2%) Query: 37 LLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYIN-SPGGVITAGMSIYDTMQ 95 ++ +R I L G + A+ ++A++ + + + I+L I+ SPGG + AG I MQ Sbjct: 214 VMSDRRIALNGPISMRTADNVIARINYFNNRDAKLPIFLVIDDSPGGSVMAGYKIVKAMQ 273 Query: 96 FIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHARE 155 + V + AASM A + T + N+ ++ HQ G T + +E Sbjct: 274 GSQAPVHVVVKSFAASMAACIATVAKHS--YAYSNTVILHHQIHSFAGGNLTQQQEWLKE 331 Query: 156 ILKVKGRMNELMALHTGQSLEQI 178 + + R+ + +A+ G S E++ Sbjct: 332 MEEWWRRLADPVAVKMGISREEL 354 >UniRef50_A5V8D3 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Sphingomonas wittichii RW1 RepID=A5V8D3_SPHWW Length = 688 Score = 46.6 bits (109), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 42/162 (25%), Positives = 78/162 (48%), Gaps = 6/162 (3%) Query: 43 IFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIYDTM---QFIKP 99 I + G V D L ++ L + + D+ + INSPGG + G++IY+ + + Sbjct: 4 ILIYGIVGDSWDGLDANTIVPLISAG-DDDLDVRINSPGGYVMEGLAIYNAIIRERGKGR 62 Query: 100 DVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREILKV 159 V+T G AASMG+ L AG + N+ +MIH P G A ++ A + ++ Sbjct: 63 KVTTHIDGLAASMGSILAMAGE--EIVMADNALLMIHNPWDCACGDAIELRRAADRLDQL 120 Query: 160 KGRMNELMALHTGQSLEQIERDTERDRFLSAPEAVEYGLVDS 201 + +M + + TG + + + + +++A EA+ + S Sbjct: 121 RDQMVGIYSKATGLEADALIPMLDAETWMTATEALALNFITS 162 >UniRef50_A4J7R2 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Desulfotomaculum reducens MI-1 RepID=A4J7R2_DESRM Length = 258 Score = 46.2 bits (108), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 37/142 (26%), Positives = 69/142 (48%), Gaps = 7/142 (4%) Query: 66 AENPE-KDIYLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGK 124 A+ P+ K+I ++INS GG + G +IY ++ + G A S+ + + A G Sbjct: 51 AKYPDVKEIKIFINSYGGSVFEGTAIYSQLRRHPAQKTVYIDGFACSVASVIAMA---GD 107 Query: 125 RFCLP-NSRVMIHQPLGGYQGQATDIEIHAREI--LKVKGRMNELMALHTGQSLEQIERD 181 R +P N+ +MIH G AT + A ++ + R + L + + E++ Sbjct: 108 RVIMPKNTMMMIHNAWNIVAGNATQLRKAADDLDTIMAGNRQSYLQKSNGKITEEKLIEL 167 Query: 182 TERDRFLSAPEAVEYGLVDSIL 203 + + +L+A + +EYG D +L Sbjct: 168 LDAETWLTAEQCIEYGFADELL 189 >UniRef50_Q854A3 Gp163 n=1 Tax=Mycobacterium phage Omega RepID=Q854A3_9CAUD Length = 236 Score = 46.2 bits (108), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 38/147 (25%), Positives = 66/147 (44%), Gaps = 15/147 (10%) Query: 67 ENPEKDIYLYINSPGGVITAGMSIYDTMQFIKPD--------VSTICMGQAASMGAFLLT 118 ++PE L ++SPGG +G D Q I+ ++ G AASMG +L Sbjct: 93 QDPESKWNLIVDSPGGYCNSGFHAID--QLIEYSAWGGGSHYITMTVRGMAASMGGIILQ 150 Query: 119 AGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREILKVKGRMNELMALHTGQSLEQI 178 A +R N++++IH G G ++ + I + + +L G+ L + Sbjct: 151 AA--DERVMGRNAQILIHPISSGLYGGRGELHDYMGRIEMLTAQAEKLFKHRAGKKLPRK 208 Query: 179 ERDTE---RDRFLSAPEAVEYGLVDSI 202 + ++ ++ A EA+EY LVD I Sbjct: 209 KLKNALMYKNWWIGAEEALEYALVDRI 235 >UniRef50_B7IY99 ATP-dependent Clp protease proteolytic subunit n=16 Tax=Bacillus cereus group RepID=B7IY99_BACC2 Length = 260 Score = 46.2 bits (108), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 36/133 (27%), Positives = 62/133 (46%), Gaps = 4/133 (3%) Query: 72 DIYLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNS 131 D+ + INSPGG + G IY ++ V +G AAS + + A K + P + Sbjct: 44 DLVVSINSPGGYVHEGSEIYTALKNYPGHVEVQIVGLAASAASVIAMAADKVR--ISPTA 101 Query: 132 RVMIHQPLGGYQGQATDIEIHAREILKVKGR-MNELMALHTGQSLEQIERDTERDRFLSA 190 ++MIH G D+ A E+LK R + + +G+S E++ + ++ Sbjct: 102 QIMIHNASMWNGGDHRDMS-KAAEMLKTTDRAIVNAYVIKSGKSEEELLNMMAEETWMGP 160 Query: 191 PEAVEYGLVDSIL 203 +A+E VD I+ Sbjct: 161 QQALENNFVDEIM 173 >UniRef50_B9Z769 Peptidase S14 ClpP n=1 Tax=Lutiella nitroferrum 2002 RepID=B9Z769_9NEIS Length = 217 Score = 46.2 bits (108), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 39/132 (29%), Positives = 64/132 (48%), Gaps = 11/132 (8%) Query: 18 PMVIEQTSRGERSFDIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDI-YLY 76 P V + SR ++I S+L E +L G+++ A+ + + E DI YL+ Sbjct: 19 PAVFQGLSR----YEIRSQL-SEISFYLCGEIQ---ASHFYTNLFYTLRSASETDIIYLH 70 Query: 77 INSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIH 136 +N+ GG GM I + MQ V T+ +A SMGA + AG + + N ++M H Sbjct: 71 LNTTGGDFDTGMQIINNMQSSCAHVITVLEARAYSMGALIFLAGDELE--VQDNCQLMFH 128 Query: 137 QPLGGYQGQATD 148 G + G+ T+ Sbjct: 129 IYSGTFAGRGTE 140 >UniRef50_A5ZRV6 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Ruminococcus obeum ATCC 29174 RepID=A5ZRV6_9FIRM Length = 252 Score = 45.8 bits (107), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 35/135 (25%), Positives = 65/135 (48%), Gaps = 4/135 (2%) Query: 63 FLEAENPEKDIYLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAK 122 F+ P ++ +YINS GG + AG++I+ + + I G AAS+ + +L A Sbjct: 62 FMNQIEPGAELTVYINSGGGDVFAGIAIHSILSRHTGHKTGIVDGMAASIASVILMAC-- 119 Query: 123 GKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREILKVKGRMNELMA--LHTGQSLEQIER 180 +++MIH+PL G A D + E+ K + + ++ + G + EQ+ Sbjct: 120 DSIVMSSGAQIMIHKPLSWAYGNADDFQRLISELDKCQKSITDIYMGRVKEGVTEEQVTD 179 Query: 181 DTERDRFLSAPEAVE 195 + +++A EA E Sbjct: 180 LINAETWMTAEEAKE 194 >UniRef50_UPI0001C37221 ATP-dependent Clp protease, proteolytic subunit ClpP, putative n=1 Tax=Ruminococcus flavefaciens FD-1 RepID=UPI0001C37221 Length = 306 Score = 45.8 bits (107), Expect = 0.001, Method: Compositional matrix adjust. Identities = 47/165 (28%), Positives = 76/165 (46%), Gaps = 4/165 (2%) Query: 41 RVIFLTGQVEDH--MANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIYDTMQFIK 98 RV+ L G ++ + I Q E + D+ L+INSPGG + A IY ++ Sbjct: 15 RVLRLEGPIDSDSFWGDEITPQDFRDELYAEDGDLTLWINSPGGNVFAAAEIYTMIRDYP 74 Query: 99 PDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREILK 158 +V+ AAS + + AG + P + +MI+ P G A D+E + + Sbjct: 75 HNVTVRIASIAASAASVIAMAGNTVQ--MSPTALLMINDPSTIAFGNAKDMEKAIATLNE 132 Query: 159 VKGRMNELMALHTGQSLEQIERDTERDRFLSAPEAVEYGLVDSIL 203 VK + A TG S +I + + +++A +AVE G D IL Sbjct: 133 VKESIINAYAAKTGLSRNRISKLMSDETWINAKKAVELGFADEIL 177 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_C4K4P2 ATP-dependent Clp protease proteolytic subunit n... 303 2e-81 UniRef50_D0MF29 ATP-dependent Clp protease proteolytic subunit n... 298 9e-80 UniRef50_A5W635 ATP-dependent Clp protease proteolytic subunit n... 297 1e-79 UniRef50_Q7V992 ATP-dependent Clp protease proteolytic subunit 1... 295 6e-79 UniRef50_A8H614 ATP-dependent Clp protease proteolytic subunit n... 294 1e-78 UniRef50_A4JF05 ATP-dependent Clp protease proteolytic subunit n... 294 2e-78 UniRef50_Q1RJH2 ATP-dependent Clp protease proteolytic subunit n... 292 3e-78 UniRef50_C9KKA6 ATP-dependent Clp protease proteolytic subunit n... 290 2e-77 UniRef50_O34125 ATP-dependent Clp protease proteolytic subunit 2... 290 3e-77 UniRef50_Q2G3T3 ATP-dependent Clp protease proteolytic subunit n... 286 3e-76 UniRef50_Q8DJZ9 ATP-dependent Clp protease proteolytic subunit 2... 286 4e-76 UniRef50_Q11J60 ATP-dependent Clp protease proteolytic subunit 1... 284 1e-75 UniRef50_A6Q675 ATP-dependent Clp protease proteolytic subunit n... 283 2e-75 UniRef50_Q2RZ59 ATP-dependent Clp protease proteolytic subunit 2... 280 2e-74 UniRef50_Q1PW15 ATP-dependent Clp protease proteolytic subunit n... 279 4e-74 UniRef50_Q0CXE7 ATP-dependent Clp protease proteolytic subunit n... 277 2e-73 UniRef50_D0WES0 ATP-dependent Clp protease proteolytic subunit n... 274 1e-72 UniRef50_Q7UK66 ATP-dependent Clp protease proteolytic subunit 2... 273 2e-72 UniRef50_Q9S834 ATP-dependent Clp protease proteolytic subunit 5... 270 1e-71 UniRef50_Q64NW2 ATP-dependent Clp protease proteolytic subunit n... 258 8e-68 UniRef50_C1FDX2 ATP-dependent Clp protease proteolytic subunit n... 256 3e-67 UniRef50_Q2JHM1 ATP-dependent Clp protease proteolytic subunit 1... 255 6e-67 UniRef50_Q27539 ATP-dependent Clp protease proteolytic subunit, ... 253 2e-66 UniRef50_Q4JWV4 ATP-dependent Clp protease proteolytic subunit 1... 248 1e-64 UniRef50_Q7UK67 ATP-dependent Clp protease proteolytic subunit 1... 247 1e-64 UniRef50_Q05FR8 ATP-dependent Clp protease proteolytic subunit n... 247 2e-64 UniRef50_A4RXD2 ATP-dependent Clp protease proteolytic subunit n... 245 7e-64 UniRef50_A8RFM5 ATP-dependent Clp protease proteolytic subunit n... 243 3e-63 UniRef50_UPI00016C35C0 ATP-dependent Clp protease proteolytic su... 242 5e-63 UniRef50_Q2J9A8 ATP-dependent Clp protease proteolytic subunit 4... 241 1e-62 UniRef50_Q9SXJ6 ATP-dependent Clp protease proteolytic subunit 3... 240 2e-62 UniRef50_Q47MU3 ATP-dependent Clp protease proteolytic subunit 1... 238 6e-62 UniRef50_C0M7M8 ATP-dependent Clp protease proteolytic subunit n... 237 3e-61 UniRef50_Q5Z0M4 ATP-dependent Clp protease proteolytic subunit 1... 236 4e-61 UniRef50_Q9MUV8 ATP-dependent Clp protease proteolytic subunit n... 235 1e-60 UniRef50_D1BZJ7 ATP-dependent Clp protease proteolytic subunit n... 233 2e-60 UniRef50_Q94B60 ATP-dependent Clp protease proteolytic subunit 4... 231 1e-59 UniRef50_Q82CA5 ATP-dependent Clp protease proteolytic subunit 4... 231 1e-59 UniRef50_Q9SAA2 ATP-dependent Clp protease proteolytic subunit 6... 230 2e-59 UniRef50_C7QFY1 ATP-dependent Clp protease proteolytic subunit n... 230 3e-59 UniRef50_C4R657 ATP-dependent Clp protease proteolytic subunit n... 229 4e-59 UniRef50_Q8LB10 ATP-dependent Clp protease proteolytic subunit-r... 227 1e-58 UniRef50_P56772 ATP-dependent Clp protease proteolytic subunit 1... 226 5e-58 UniRef50_D2Q440 Endopeptidase Clp n=5 Tax=Actinomycetales RepID=... 222 6e-57 UniRef50_C1E717 ATP-dependent Clp protease proteolytic subunit n... 222 7e-57 UniRef50_B3L4C3 ATP-dependent Clp protease proteolytic subunit n... 221 1e-56 UniRef50_Q7NEW1 ATP-dependent Clp protease proteolytic subunit 2... 220 4e-56 UniRef50_B8AMH6 ATP-dependent Clp protease proteolytic subunit n... 219 5e-56 UniRef50_Q9XJ36 ATP-dependent Clp protease proteolytic subunit-r... 219 6e-56 UniRef50_A7ATV1 ATP-dependent Clp protease proteolytic subunit n... 218 1e-55 UniRef50_UPI0001AF02E3 ATP-dependent Clp protease n=1 Tax=Strept... 218 1e-55 UniRef50_Q72R01 ATP-dependent Clp protease proteolytic subunit 2... 217 2e-55 UniRef50_C1FE28 ATP-dependent Clp protease proteolytic subunit (... 217 2e-55 UniRef50_C7JE62 ATP-dependent Clp protease proteolytic subunit n... 216 3e-55 UniRef50_C5C3N3 ATP-dependent Clp protease proteolytic subunit n... 216 4e-55 UniRef50_C1N254 ATP-dependent Clp protease proteolytic subunit n... 215 9e-55 UniRef50_Q36863 ATP-dependent Clp protease proteolytic subunit n... 213 2e-54 UniRef50_P36387 ATP-dependent Clp protease proteolytic subunit n... 213 3e-54 UniRef50_B1X4K7 ATP-dependent Clp protease proteolytic subunit n... 212 6e-54 UniRef50_O97252 ATP-dependent Clp protease proteolytic subunit n... 212 7e-54 UniRef50_C9RRI3 ATP-dependent Clp protease proteolytic subunit n... 211 1e-53 UniRef50_A6DMN5 ATP-dependent Clp protease proteolytic subunit n... 211 1e-53 UniRef50_B4WHH0 ATP-dependent Clp protease proteolytic subunit n... 210 2e-53 UniRef50_Q2K5Q0 ATP-dependent Clp protease proteolytic subunit 3... 210 2e-53 UniRef50_Q01F73 ATP-dependent Clp protease proteolytic subunit (... 210 3e-53 UniRef50_Q06J25 ATP-dependent Clp protease proteolytic subunit n... 210 3e-53 UniRef50_A0LYF8 ATP-dependent Clp protease proteolytic subunit n... 209 4e-53 UniRef50_B0LP85 ATP-dependent Clp protease proteolytic subunit n... 208 8e-53 UniRef50_Q9L4P4 Putative ATP-dependent Clp protease proteolytic ... 208 9e-53 UniRef50_B9YN00 ATP-dependent Clp protease proteolytic subunit n... 207 2e-52 UniRef50_Q3AVC4 ATP-dependent Clp protease proteolytic subunit n... 206 4e-52 UniRef50_Q1PYX1 ATP-dependent Clp protease proteolytic subunit n... 206 5e-52 UniRef50_B9F8Z4 ATP-dependent Clp protease proteolytic subunit n... 205 7e-52 UniRef50_A4W647 ATP-dependent Clp protease proteolytic subunit n... 205 8e-52 UniRef50_Q6ME32 ATP-dependent Clp protease proteolytic subunit 1... 205 1e-51 UniRef50_A7AQC7 ATP-dependent Clp protease proteolytic subunit n... 204 2e-51 UniRef50_Q3LWG6 ATP-dependent Clp protease proteolytic subunit n... 202 5e-51 UniRef50_C7N490 ATP-dependent Clp protease proteolytic subunit n... 202 5e-51 UniRef50_Q73JM9 ATP-dependent Clp protease proteolytic subunit 2... 202 6e-51 UniRef50_Q8UD57 ATP-dependent Clp protease proteolytic subunit 3... 200 4e-50 UniRef50_D0L7Q6 ATP-dependent Clp protease proteolytic subunit n... 200 4e-50 UniRef50_A8IS47 ATP-dependent Clp protease proteolytic subunit n... 199 6e-50 UniRef50_Q4UAC9 ATP-dependent Clp protease proteolytic subunit n... 198 8e-50 UniRef50_A8INX1 ATP-dependent Clp protease proteolytic subunit n... 198 1e-49 UniRef50_Q06FP3 ATP-dependent Clp protease proteolytic subunit n... 198 1e-49 UniRef50_P48254 Putative ATP-dependent Clp protease proteolytic ... 196 3e-49 UniRef50_D1BUV7 ATP-dependent Clp protease proteolytic subunit n... 196 3e-49 UniRef50_B0LP81 ATP-dependent Clp protease proteolytic subunit n... 196 5e-49 UniRef50_A4S2U0 ATP-dependent Clp protease proteolytic subunit n... 195 8e-49 UniRef50_C5XH66 ATP-dependent Clp protease proteolytic subunit n... 195 1e-48 UniRef50_Q8L770 ATP-dependent Clp protease proteolytic subunit-r... 194 2e-48 UniRef50_Q06R14 ATP-dependent Clp protease proteolytic subunit n... 193 2e-48 UniRef50_B7FZS4 ATP-dependent Clp protease proteolytic subunit n... 193 3e-48 UniRef50_Q6C1Y5 ATP-dependent Clp protease proteolytic subunit n... 192 6e-48 UniRef50_A9I409 ATP-dependent Clp protease proteolytic subunit n... 192 6e-48 UniRef50_O51698 ATP-dependent Clp protease proteolytic subunit 2... 192 6e-48 UniRef50_B5A4F2 ATP-dependent Clp protease proteolytic subunit n... 191 1e-47 UniRef50_C5CQN7 ATP-dependent Clp protease proteolytic subunit n... 190 3e-47 UniRef50_Q5Z0M5 ATP-dependent Clp protease proteolytic subunit n... 190 3e-47 UniRef50_A4RSQ9 ATP-dependent Clp protease proteolytic subunit n... 190 4e-47 UniRef50_D1Z6F0 ATP-dependent Clp protease proteolytic subunit n... 189 6e-47 UniRef50_B0LN89 ATP-dependent Clp protease proteolytic subunit n... 188 1e-46 UniRef50_Q9MTJ8 ATP-dependent Clp protease proteolytic subunit n... 188 1e-46 UniRef50_B4WHH1 ATP-dependent Clp protease proteolytic subunit n... 187 2e-46 UniRef50_B3LBC6 ATP-dependent Clp protease proteolytic subunit n... 186 3e-46 UniRef50_Q011H7 ATP-dependent Clp protease proteolytic subunit n... 186 5e-46 UniRef50_Q3LW65 ATP-dependent Clp protease proteolytic subunit n... 183 3e-45 UniRef50_Q2WGG1 ATP-dependent Clp protease proteolytic subunit (... 181 1e-44 UniRef50_C7Z253 ATP-dependent Clp protease proteolytic subunit n... 181 1e-44 UniRef50_UPI000196C506 hypothetical protein CATMIT_02666 n=1 Tax... 180 2e-44 UniRef50_B9HMY7 ATP-dependent Clp protease proteolytic subunit n... 180 3e-44 UniRef50_UPI0000DB7F4F PREDICTED: similar to Putative ATP-depend... 179 5e-44 UniRef50_B2X1V4 ATP-dependent Clp protease proteolytic subunit n... 179 6e-44 UniRef50_Q9XJ35 ATP-dependent Clp protease proteolytic subunit-r... 178 1e-43 UniRef50_Q872F9 ATP-dependent Clp protease proteolytic subunit n... 178 1e-43 UniRef50_B0LP79 ATP-dependent Clp protease proteolytic subunit n... 178 1e-43 UniRef50_Q3Z7J8 ATP-dependent Clp protease proteolytic subunit n... 177 2e-43 UniRef50_B1X3L4 ATP-dependent Clp protease proteolytic subunit n... 176 3e-43 UniRef50_Q06SH9 ATP-dependent Clp protease proteolytic subunit n... 176 4e-43 UniRef50_A4E7Q8 ATP-dependent Clp protease proteolytic subunit n... 176 4e-43 UniRef50_A8IXD6 ATP-dependent Clp protease proteolytic subunit n... 174 1e-42 UniRef50_A4S2Q5 ATP-dependent Clp protease proteolytic subunit n... 174 2e-42 UniRef50_Q2VPX8 ATP-dependent Clp protease proteolytic subunit (... 173 2e-42 UniRef50_B0LNX5 ATP-dependent Clp protease proteolytic subunit n... 171 2e-41 UniRef50_C5YWZ8 ATP-dependent Clp protease proteolytic subunit n... 170 3e-41 UniRef50_D1NE80 ATP-dependent Clp protease proteolytic subunit (... 169 5e-41 UniRef50_B7ZIH9 ATP-dependent Clp protease proteolytic subunit n... 169 5e-41 UniRef50_B0LNM7 ATP-dependent Clp protease proteolytic subunit n... 168 1e-40 UniRef50_B1X3L5 ATP-dependent Clp protease proteolytic subunit n... 164 1e-39 UniRef50_B7C8Y7 ATP-dependent Clp protease proteolytic subunit n... 164 1e-39 UniRef50_C1FD32 ATP-dependent Clp protease proteolytic subunit n... 162 9e-39 UniRef50_A8IH07 ATP-dependent Clp protease proteolytic subunit n... 161 9e-39 UniRef50_B5A4F3 ATP-dependent Clp protease proteolytic subunit n... 161 9e-39 UniRef50_B5YV95 ATP-dependent Clp protease proteolytic subunit n... 161 1e-38 UniRef50_A0JQM5 ATP-dependent Clp protease proteolytic subunit n... 160 2e-38 UniRef50_C8VJ02 ATP-dependent Clp protease proteolytic subunit n... 160 3e-38 UniRef50_B6G8S8 ATP-dependent Clp protease proteolytic subunit n... 159 5e-38 UniRef50_A7FWE0 ATP-dependent Clp protease proteolytic subunit n... 159 5e-38 UniRef50_A3DG62 ATP-dependent Clp protease proteolytic subunit n... 158 9e-38 UniRef50_C3WMS7 ATP-dependent Clp protease proteolytic subunit n... 157 3e-37 UniRef50_B3JP66 ATP-dependent Clp protease proteolytic subunit n... 154 1e-36 UniRef50_Q65ES6 ATP-dependent Clp protease proteolytic subunit n... 154 2e-36 UniRef50_B2TQV1 ATP-dependent Clp protease proteolytic subunit n... 153 5e-36 UniRef50_A3JIS6 ATP-dependent Clp protease proteolytic subunit n... 152 6e-36 UniRef50_A5KJS2 ATP-dependent Clp protease proteolytic subunit n... 152 6e-36 UniRef50_B0TCT9 ATP-dependent Clp protease proteolytic subunit n... 152 7e-36 UniRef50_C1D8G7 ATP-dependent Clp protease proteolytic subunit n... 151 1e-35 UniRef50_C5CJP6 ATP-dependent Clp protease proteolytic subunit n... 151 1e-35 UniRef50_Q2NPI5 ClpP family protein n=3 Tax=unclassified Siphovi... 151 2e-35 UniRef50_Q3Z3P3 ATP-dependent Clp protease proteolytic subunit n... 151 2e-35 UniRef50_B9CLK4 ATP-dependent Clp protease proteolytic subunit n... 150 3e-35 UniRef50_B5R8Q7 ATP-dependent Clp protease proteolytic subunit n... 150 3e-35 UniRef50_A5BHP1 ATP-dependent Clp protease proteolytic subunit n... 149 4e-35 UniRef50_A3DFX4 ATP-dependent Clp protease proteolytic subunit n... 148 1e-34 UniRef50_C9ZCK7 ATP-dependent Clp protease proteolytic subunit n... 148 1e-34 UniRef50_B2KDB1 ATP-dependent Clp protease proteolytic subunit n... 148 1e-34 UniRef50_A1WEU3 ATP-dependent Clp protease proteolytic subunit n... 147 3e-34 UniRef50_B7UZW7 ATP-dependent Clp protease proteolytic subunit n... 146 5e-34 UniRef50_C1ZNA8 ATP-dependent Clp protease proteolytic subunit n... 146 6e-34 UniRef50_A5V8D3 ATP-dependent Clp protease proteolytic subunit n... 146 6e-34 UniRef50_Q4UBQ0 ATP-dependent Clp protease proteolytic subunit n... 146 6e-34 UniRef50_C5R880 ATP-dependent Clp protease proteolytic subunit n... 145 9e-34 UniRef50_C2KJ97 ATP-dependent Clp protease proteolytic subunit n... 145 1e-33 UniRef50_A4J7R2 ATP-dependent Clp protease proteolytic subunit n... 144 1e-33 UniRef50_C2BG30 ATP-dependent Clp protease proteolytic subunit n... 144 1e-33 UniRef50_A3UVN6 ATP-dependent Clp protease proteolytic subunit n... 144 2e-33 UniRef50_B1JDT0 ATP-dependent Clp protease proteolytic subunit n... 144 2e-33 UniRef50_A5F9J4 ATP-dependent Clp protease proteolytic subunit n... 143 3e-33 UniRef50_Q041N2 ATP-dependent Clp protease proteolytic subunit n... 142 6e-33 UniRef50_B7QPY3 ATP-dependent Clp protease proteolytic subunit n... 142 6e-33 UniRef50_Q0AG16 ATP-dependent Clp protease proteolytic subunit n... 142 7e-33 UniRef50_B2Y1Y4 ATP-dependent Clp protease proteolytic subunit n... 142 7e-33 UniRef50_A8U7Z4 ATP-dependent Clp protease proteolytic subunit n... 141 1e-32 UniRef50_D1ZWV1 ATP-dependent Clp protease proteolytic subunit (... 141 2e-32 UniRef50_Q7P8G2 ATP-dependent Clp protease proteolytic subunit n... 140 3e-32 UniRef50_A8Z285 ATP-dependent Clp protease proteolytic subunit n... 140 3e-32 UniRef50_A1VPI3 ATP-dependent Clp protease proteolytic subunit n... 139 4e-32 UniRef50_B7HV38 ATP-dependent Clp protease proteolytic subunit n... 139 4e-32 UniRef50_B1BPQ5 ATP-dependent Clp protease proteolytic subunit n... 139 5e-32 UniRef50_B8DAG3 ATP-dependent Clp protease proteolytic subunit n... 139 6e-32 UniRef50_C3WVP2 ATP-dependent Clp protease proteolytic subunit n... 139 6e-32 UniRef50_C4ML05 P05 n=1 Tax=Xanthomonas phage phiL7 RepID=C4ML05... 139 6e-32 UniRef50_A1VKV0 ATP-dependent Clp protease proteolytic subunit n... 139 7e-32 UniRef50_A6N1Z7 Clp protease n=1 Tax=Microbacterium phage Min1 R... 138 9e-32 UniRef50_UPI0001B44862 Clp protease domain protein n=3 Tax=Liste... 138 1e-31 UniRef50_A8GLM2 ATP-dependent Clp protease proteolytic subunit n... 138 1e-31 UniRef50_UPI0001B43327 serine protease n=1 Tax=Listeria monocyto... 137 2e-31 UniRef50_Q892G9 ATP-dependent Clp protease proteolytic subunit n... 137 3e-31 UniRef50_B7IY99 ATP-dependent Clp protease proteolytic subunit n... 136 3e-31 UniRef50_Q72BY3 ClpP protease family protein n=2 Tax=Desulfovibr... 136 4e-31 UniRef50_B8ILU4 ATP-dependent Clp protease proteolytic subunit n... 136 5e-31 UniRef50_B3EUB4 Peptidase S14 ClpP n=1 Tax=Candidatus Amoebophil... 136 6e-31 UniRef50_A7GI71 ATP-dependent Clp protease proteolytic subunit n... 135 7e-31 UniRef50_Q2VPY9 ATP-dependent Clp protease proteolytic subunit (... 135 7e-31 UniRef50_P42380 ATP-dependent Clp protease proteolytic subunit n... 135 7e-31 UniRef50_B2V4L4 ATP-dependent Clp protease proteolytic subunit n... 135 7e-31 UniRef50_B1MZD0 ATP-dependent Clp protease proteolytic subunit n... 135 8e-31 UniRef50_Q3RAG5 ATP-dependent Clp protease proteolytic subunit n... 135 8e-31 UniRef50_A3F644 Head maturation protease n=3 Tax=root RepID=A3F6... 135 9e-31 UniRef50_C7D0Z8 ATP-dependent Clp protease proteolytic subunit n... 134 1e-30 UniRef50_UPI0001C37221 ATP-dependent Clp protease, proteolytic s... 134 1e-30 UniRef50_A8SI37 Putative uncharacterized protein n=1 Tax=Parvimo... 134 1e-30 UniRef50_UPI0001B52F96 putative Clp protease n=1 Tax=Fusobacteri... 134 2e-30 UniRef50_B9QT01 ATP-dependent Clp protease proteolytic subunit n... 134 2e-30 UniRef50_A3X5R0 ATP-dependent Clp protease proteolytic subunit n... 134 2e-30 UniRef50_A5ZPL9 ATP-dependent Clp protease proteolytic subunit n... 133 3e-30 UniRef50_A9C2D1 ATP-dependent Clp protease proteolytic subunit n... 133 4e-30 UniRef50_D0DKS7 ATP-dependent Clp protease proteolytic subunit n... 133 4e-30 UniRef50_Q3EL78 ATP-dependent Clp protease proteolytic subunit n... 132 7e-30 UniRef50_B8D1N4 ATP-dependent Clp protease proteolytic subunit n... 132 9e-30 UniRef50_Q50DZ1 ATP-dependent Clp protease proteolytic subunit n... 131 1e-29 UniRef50_B2V2A3 Peptidase S14, ClpP n=1 Tax=Clostridium botulinu... 131 1e-29 UniRef50_A8RU31 ATP-dependent Clp protease proteolytic subunit n... 131 2e-29 UniRef50_Q3LW56 ATP-dependent Clp protease proteolytic subunit n... 131 2e-29 UniRef50_A5ZRV6 ATP-dependent Clp protease proteolytic subunit n... 131 2e-29 UniRef50_UPI0001BC4FF2 peptidase S14, ClpP n=1 Tax=Fusobacterium... 129 4e-29 UniRef50_A5Z441 Putative uncharacterized protein n=1 Tax=Eubacte... 129 5e-29 UniRef50_C6VLG0 ATP-dependent Clp protease proteolytic subunit n... 128 2e-28 UniRef50_C6UN97 ATP-dependent Clp protease proteolytic subunit n... 127 3e-28 UniRef50_B0MY38 ATP-dependent Clp protease proteolytic subunit n... 126 4e-28 UniRef50_Q1QKR7 ATP-dependent Clp protease proteolytic subunit n... 125 8e-28 UniRef50_B1RAB0 ATP-dependent Clp protease proteolytic subunit n... 125 8e-28 UniRef50_C4GAS5 ATP-dependent Clp protease proteolytic subunit n... 124 1e-27 UniRef50_Q5IX12 ATP-dependent Clp protease proteolytic subunit (... 123 3e-27 UniRef50_B6FWW7 ATP-dependent Clp protease proteolytic subunit n... 122 7e-27 UniRef50_D2LX80 Peptidase S14 ClpP n=1 Tax=Bacillus cellulosilyt... 121 1e-26 UniRef50_B3Y5P7 ATP-dependent Clp protease proteolytic subunit (... 120 3e-26 UniRef50_D2LST4 Peptidase S14 ClpP n=1 Tax=Bacillus cellulosilyt... 120 3e-26 UniRef50_B4D6M6 Peptidase S14 ClpP n=1 Tax=Chthoniobacter flavus... 120 4e-26 UniRef50_B6KPT2 ATP-dependent Clp protease proteolytic subunit n... 119 5e-26 UniRef50_UPI00017450C3 ATP-dependent Clp protease proteolytic su... 119 5e-26 UniRef50_A6QII7 ATP-dependent Clp protease proteolytic subunit n... 119 6e-26 Sequences not found previously or not previously below threshold: UniRef50_C4KQ21 ATP-dependent Clp protease proteolytic subunit n... 144 1e-33 UniRef50_C7Q187 ATP-dependent Clp protease proteolytic subunit n... 138 1e-31 UniRef50_D0J499 ATP-dependent Clp protease proteolytic subunit n... 138 2e-31 UniRef50_B7JPB9 ATP-dependent Clp protease proteolytic subunit n... 133 5e-30 UniRef50_A7FXQ7 ATP-dependent Clp protease proteolytic subunit n... 131 1e-29 UniRef50_B8L012 Peptidase S14, ClpP n=1 Tax=Stenotrophomonas sp.... 131 1e-29 UniRef50_C8RQH1 ATP-dependent Clp protease proteolytic subunit n... 130 2e-29 UniRef50_UPI0001BC65FA prophage LambdaBa02, Clp protease family ... 128 9e-29 UniRef50_C4FX34 ATP-dependent Clp protease proteolytic subunit n... 128 9e-29 UniRef50_Q03FG4 Protease subunit of ATP-dependent Clp protease n... 126 5e-28 UniRef50_A9APU6 ATP-dependent Clp protease proteolytic subunit n... 126 5e-28 UniRef50_C4WDN9 ATP-dependent Clp protease proteolytic subunit n... 124 1e-27 UniRef50_C3WBA5 ATP-dependent Clp protease proteolytic subunit n... 123 4e-27 UniRef50_C7XJ21 ATP-dependent Clp protease, proteolytic subunit ... 121 1e-26 UniRef50_C3WAW3 ATP-dependent Clp protease proteolytic subunit n... 120 3e-26 UniRef50_B0NDG2 ATP-dependent Clp protease proteolytic subunit n... 119 4e-26 UniRef50_Q88IF4 ATP-dependent Clp protease proteolytic subunit n... 119 5e-26 UniRef50_A3LLS6 Putative uncharacterized protein n=1 Tax=Pseudom... 119 5e-26 >UniRef50_C4K4P2 ATP-dependent Clp protease proteolytic subunit n=300 Tax=cellular organisms RepID=CLPP_HAMD5 Length = 215 Score = 303 bits (777), Expect = 2e-81, Method: Composition-based stats. Identities = 165/207 (79%), Positives = 186/207 (89%) Query: 1 MSYSGERDNFAPHMALVPMVIEQTSRGERSFDIYSRLLKERVIFLTGQVEDHMANLIVAQ 60 MS E++ P M LVPMV+EQTSRGER++DIYSR+LKERVIFLTGQVE+HMANLIVAQ Sbjct: 1 MSSFDEQNTRLPSMTLVPMVVEQTSRGERAYDIYSRMLKERVIFLTGQVEEHMANLIVAQ 60 Query: 61 MLFLEAENPEKDIYLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAG 120 MLFLEAENPEKDIYLYINSPGGVITAGMSIYDTMQFI PDVSTIC+GQA SMGAFLL AG Sbjct: 61 MLFLEAENPEKDIYLYINSPGGVITAGMSIYDTMQFITPDVSTICIGQACSMGAFLLAAG 120 Query: 121 AKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREILKVKGRMNELMALHTGQSLEQIER 180 AK KR+CLPN+RVMIHQPLGG+QGQA+DIEIHA+EILKVK RMN+LMA+HT ++L+ IE+ Sbjct: 121 AKSKRYCLPNARVMIHQPLGGFQGQASDIEIHAKEILKVKKRMNDLMAIHTKKTLKIIEK 180 Query: 181 DTERDRFLSAPEAVEYGLVDSILTHRN 207 DTERD FLSA EA +YGLVD +LT R Sbjct: 181 DTERDHFLSAEEAKKYGLVDCVLTERK 207 >UniRef50_D0MF29 ATP-dependent Clp protease proteolytic subunit n=3 Tax=Bacteria RepID=D0MF29_RHOM4 Length = 252 Score = 298 bits (763), Expect = 9e-80, Method: Composition-based stats. Identities = 127/206 (61%), Positives = 165/206 (80%), Gaps = 2/206 (0%) Query: 3 YSGERDNFAPHMALVPMVIEQTSRGERSFDIYSRLLKERVIFLTGQVEDHMANLIVAQML 62 YSG + P ALVP+VIEQT+RGER++DI+SRLLKER++ + + D +ANL+VAQ+L Sbjct: 24 YSGPFQQY-PVGALVPIVIEQTTRGERAYDIFSRLLKERIVIIGTPINDQIANLVVAQLL 82 Query: 63 FLEAENPEKDIYLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAK 122 +L +E+ E+DI +YINSPGG I +G+++YDTMQ++ P V+TIC+G AASMGA LL AG K Sbjct: 83 WLASEDSERDINIYINSPGGSIDSGLAVYDTMQYVAPPVATICVGLAASMGAVLLAAGVK 142 Query: 123 GKRFCLPNSRVMIHQPLG-GYQGQATDIEIHAREILKVKGRMNELMALHTGQSLEQIERD 181 GKR LPNSR+MIHQP G QGQATDIEIHAREILK++ R+NE++A HTGQ E+I +D Sbjct: 143 GKRAALPNSRIMIHQPWMSGVQGQATDIEIHAREILKMRERLNEILAYHTGQPKERIAQD 202 Query: 182 TERDRFLSAPEAVEYGLVDSILTHRN 207 +RD +LSA EA EYGLVD++LT R Sbjct: 203 VDRDFWLSAQEAKEYGLVDNVLTPRR 228 >UniRef50_A5W635 ATP-dependent Clp protease proteolytic subunit n=55 Tax=cellular organisms RepID=CLPP_PSEP1 Length = 213 Score = 297 bits (762), Expect = 1e-79, Method: Composition-based stats. Identities = 155/205 (75%), Positives = 177/205 (86%) Query: 2 SYSGERDNFAPHMALVPMVIEQTSRGERSFDIYSRLLKERVIFLTGQVEDHMANLIVAQM 61 SY + + LVPMVIEQ++RGER++DIYSRLLKERVIFL G VED+MANL+VAQ+ Sbjct: 5 SYIQQSSDIQAAGGLVPMVIEQSARGERAYDIYSRLLKERVIFLVGPVEDYMANLVVAQL 64 Query: 62 LFLEAENPEKDIYLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGA 121 LFLEAENP+KDI+LYINSPGG +TAGMSIYDTMQFIKPDVSTIC+GQA SMGAFLL AGA Sbjct: 65 LFLEAENPDKDIHLYINSPGGSVTAGMSIYDTMQFIKPDVSTICIGQACSMGAFLLAAGA 124 Query: 122 KGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREILKVKGRMNELMALHTGQSLEQIERD 181 KGKR CLPNSRVMIHQPLGG+QGQATDIEIHA+EIL +K R+NEL+A HTGQ LE I+RD Sbjct: 125 KGKRHCLPNSRVMIHQPLGGFQGQATDIEIHAQEILNIKARLNELLAYHTGQDLETIKRD 184 Query: 182 TERDRFLSAPEAVEYGLVDSILTHR 206 TERD F+SA A EYGL+DS+ R Sbjct: 185 TERDNFMSASRAAEYGLIDSVYDKR 209 >UniRef50_Q7V992 ATP-dependent Clp protease proteolytic subunit 1 n=12 Tax=Bacteria RepID=CLPP1_PROMM Length = 224 Score = 295 bits (756), Expect = 6e-79, Method: Composition-based stats. Identities = 127/203 (62%), Positives = 158/203 (77%), Gaps = 2/203 (0%) Query: 3 YSGERDNFAPHMALVPMVIEQTSRGERSFDIYSRLLKERVIFLTGQVEDHMANLIVAQML 62 + G R +P ++P V+EQ+ RGER+FDIYSRLL+ER+IFL V+D +A+ +VAQML Sbjct: 14 WQGIRPVSSP--GILPTVVEQSGRGERAFDIYSRLLRERIIFLGTGVDDQVADALVAQML 71 Query: 63 FLEAENPEKDIYLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAK 122 FLEAE+PEKDI +YINSPGG +TAG++IYDTMQ + PDV TIC G AASMGAFLL G K Sbjct: 72 FLEAEDPEKDIQIYINSPGGSVTAGLAIYDTMQQVAPDVVTICYGLAASMGAFLLCGGTK 131 Query: 123 GKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREILKVKGRMNELMALHTGQSLEQIERDT 182 GKR LPN+R+MIHQPLGG QGQA DIEI A+EIL +K +N L+A HTGQ L +I DT Sbjct: 132 GKRLALPNARIMIHQPLGGAQGQAVDIEIQAKEILFLKETLNGLLAEHTGQPLNKIAEDT 191 Query: 183 ERDRFLSAPEAVEYGLVDSILTH 205 +RD FLS +AVEYGL+D ++ Sbjct: 192 DRDHFLSPAKAVEYGLIDRVVDS 214 >UniRef50_A8H614 ATP-dependent Clp protease proteolytic subunit n=35 Tax=Bacteria RepID=CLPP_SHEPA Length = 203 Score = 294 bits (753), Expect = 1e-78, Method: Composition-based stats. Identities = 148/200 (74%), Positives = 177/200 (88%) Query: 7 RDNFAPHMALVPMVIEQTSRGERSFDIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEA 66 + + ALVPMV+EQT++GERS+DIYSRLLKERVIFL GQVE+HMANLIVAQ+LFLE+ Sbjct: 3 KAPESVLNALVPMVVEQTAKGERSYDIYSRLLKERVIFLVGQVEEHMANLIVAQLLFLES 62 Query: 67 ENPEKDIYLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRF 126 E+P+KDIYLYINSPGG +TAGM+IYDTMQFIKP+VST+C+GQAASMGAFLL GA+GKR Sbjct: 63 ESPDKDIYLYINSPGGSVTAGMAIYDTMQFIKPNVSTVCIGQAASMGAFLLAGGAEGKRH 122 Query: 127 CLPNSRVMIHQPLGGYQGQATDIEIHAREILKVKGRMNELMALHTGQSLEQIERDTERDR 186 CLPNSRVMIHQPLGG+QGQA+DI IHA+EIL +K ++N ++A HTGQ LE IERDT+RD Sbjct: 123 CLPNSRVMIHQPLGGFQGQASDIAIHAQEILGIKNKLNTMLAEHTGQPLEVIERDTDRDN 182 Query: 187 FLSAPEAVEYGLVDSILTHR 206 F+SA EA EYGLVDS++ R Sbjct: 183 FMSATEAAEYGLVDSVIAKR 202 >UniRef50_A4JF05 ATP-dependent Clp protease proteolytic subunit n=49 Tax=cellular organisms RepID=CLPP_BURVG Length = 217 Score = 294 bits (753), Expect = 2e-78, Method: Composition-based stats. Identities = 136/206 (66%), Positives = 171/206 (83%) Query: 1 MSYSGERDNFAPHMALVPMVIEQTSRGERSFDIYSRLLKERVIFLTGQVEDHMANLIVAQ 60 ++ + + A + LVP+V+E + RGERS+DIYSRLLKER++F+ G+V D ANL+VAQ Sbjct: 11 LASNAPQGFEAQALGLVPIVVETSGRGERSYDIYSRLLKERLVFMVGEVNDQTANLVVAQ 70 Query: 61 MLFLEAENPEKDIYLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAG 120 +LFLE+ENP+KDI LYINSPGG ++AGM+IYDTMQFIKPDVST+CMG AASMGAFLL +G Sbjct: 71 LLFLESENPDKDISLYINSPGGSVSAGMAIYDTMQFIKPDVSTLCMGLAASMGAFLLASG 130 Query: 121 AKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREILKVKGRMNELMALHTGQSLEQIER 180 AKGKRF LPNSRVMIHQPLGG +GQA+DIEI AREIL +K R+N L+A HTGQ +E+I R Sbjct: 131 AKGKRFALPNSRVMIHQPLGGARGQASDIEIQAREILYLKERLNNLLAQHTGQDVERIAR 190 Query: 181 DTERDRFLSAPEAVEYGLVDSILTHR 206 DT+RD F+S+ +A YGL+D +L R Sbjct: 191 DTDRDNFMSSDDAKAYGLIDQVLLKR 216 >UniRef50_Q1RJH2 ATP-dependent Clp protease proteolytic subunit n=280 Tax=cellular organisms RepID=CLPP_RICBR Length = 227 Score = 292 bits (749), Expect = 3e-78, Method: Composition-based stats. Identities = 132/195 (67%), Positives = 167/195 (85%) Query: 13 HMALVPMVIEQTSRGERSFDIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKD 72 M+ VP+VIEQTSRGER++DIYSRLLKER+IF+ G +EDHMANLI AQ+LFLEAENPEKD Sbjct: 22 PMSYVPIVIEQTSRGERAYDIYSRLLKERIIFVCGPIEDHMANLITAQLLFLEAENPEKD 81 Query: 73 IYLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSR 132 IY+YINSPGGV+TAG++IYDTMQ+IKP V+T+C+GQA SMG+FLL G KG R+ LP+SR Sbjct: 82 IYMYINSPGGVVTAGLAIYDTMQYIKPKVATLCIGQACSMGSFLLCGGEKGMRYSLPHSR 141 Query: 133 VMIHQPLGGYQGQATDIEIHAREILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPE 192 VMIHQP GGY+GQATDIEIHA+E LK+K +N L + HTGQ ++ +E+ ERD F+S E Sbjct: 142 VMIHQPSGGYRGQATDIEIHAQETLKIKKILNSLYSKHTGQDVKHVEKSMERDNFMSPEE 201 Query: 193 AVEYGLVDSILTHRN 207 A ++G++D I+THR+ Sbjct: 202 AKKFGIIDKIITHRD 216 >UniRef50_C9KKA6 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Mitsuokella multacida DSM 20544 RepID=C9KKA6_9FIRM Length = 199 Score = 290 bits (743), Expect = 2e-77, Method: Composition-based stats. Identities = 121/187 (64%), Positives = 162/187 (86%) Query: 19 MVIEQTSRGERSFDIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYIN 78 MV+E+++ GER++DIYSRLLK+R+IFL G ++D +AN +VAQ+LFLE+E+P+KDI+LYIN Sbjct: 1 MVVERSNTGERAYDIYSRLLKDRIIFLGGPIDDAVANTVVAQLLFLESEDPDKDIHLYIN 60 Query: 79 SPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQP 138 SPGGV+TAG++IYDTMQ+IKPDVSTIC+GQAASMGA LLTAGAKGKR+ LPN+R+MIHQP Sbjct: 61 SPGGVVTAGLAIYDTMQYIKPDVSTICIGQAASMGALLLTAGAKGKRYALPNARIMIHQP 120 Query: 139 LGGYQGQATDIEIHAREILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEAVEYGL 198 LGG QGQ+TDI+I AREI +++ +N+++ TG+ E + +DTERD F++A EA YGL Sbjct: 121 LGGAQGQSTDIQIQAREIQRIREVINDILVESTGKDRETVVQDTERDNFMTAEEAKAYGL 180 Query: 199 VDSILTH 205 VD ++T Sbjct: 181 VDEVITR 187 >UniRef50_O34125 ATP-dependent Clp protease proteolytic subunit 2 n=151 Tax=cellular organisms RepID=CLPP2_SYNE7 Length = 240 Score = 290 bits (742), Expect = 3e-77, Method: Composition-based stats. Identities = 130/196 (66%), Positives = 159/196 (81%) Query: 10 FAPHMALVPMVIEQTSRGERSFDIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENP 69 A A+VP V+EQ+ RGER+FDIYSRLL+ER++FL V+D +A+ IVAQ+LFLEAE+P Sbjct: 31 IAGSQAIVPTVVEQSGRGERAFDIYSRLLRERIVFLGTGVDDAVADSIVAQLLFLEAEDP 90 Query: 70 EKDIYLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLP 129 EKDI LYINSPGG +TAGM+IYDTMQ + PDV+TIC G AASMGAFLL+ GA+GKR LP Sbjct: 91 EKDIQLYINSPGGSVTAGMAIYDTMQQVAPDVATICFGLAASMGAFLLSGGAQGKRMALP 150 Query: 130 NSRVMIHQPLGGYQGQATDIEIHAREILKVKGRMNELMALHTGQSLEQIERDTERDRFLS 189 ++R+MIHQPLGG QGQA DIEI AREIL K +N+L+A HTGQ LE+IE DT+RD F+S Sbjct: 151 SARIMIHQPLGGAQGQAVDIEIQAREILYHKSTLNDLLAQHTGQPLEKIEVDTDRDFFMS 210 Query: 190 APEAVEYGLVDSILTH 205 EA YGL+D +LT Sbjct: 211 PEEAKAYGLIDQVLTR 226 >UniRef50_Q2G3T3 ATP-dependent Clp protease proteolytic subunit n=127 Tax=root RepID=CLPP_NOVAD Length = 235 Score = 286 bits (733), Expect = 3e-76, Method: Composition-based stats. Identities = 127/203 (62%), Positives = 167/203 (82%) Query: 4 SGERDNFAPHMALVPMVIEQTSRGERSFDIYSRLLKERVIFLTGQVEDHMANLIVAQMLF 63 G+ AL+P+V+EQ+SRGERSFDIYSRLL+ER+IF+TG+VEDHMA++I+AQ+LF Sbjct: 16 QGKFTTDPVTGALIPVVVEQSSRGERSFDIYSRLLRERIIFVTGEVEDHMASVIIAQLLF 75 Query: 64 LEAENPEKDIYLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKG 123 LE+ENP KDI +YINSPGGV+TAG++IYDTMQ+I+P VST+C+GQAASMG+FLL AG G Sbjct: 76 LESENPSKDISMYINSPGGVVTAGLAIYDTMQYIRPRVSTVCIGQAASMGSFLLAAGEPG 135 Query: 124 KRFCLPNSRVMIHQPLGGYQGQATDIEIHAREILKVKGRMNELMALHTGQSLEQIERDTE 183 R LPN+R+MIHQP GG +G A+DIEI AREIL+++ RMN+L TG+SL++IE+ + Sbjct: 136 MRIALPNARIMIHQPSGGARGMASDIEIQAREILRIRKRMNDLYVKFTGRSLDEIEKAMD 195 Query: 184 RDRFLSAPEAVEYGLVDSILTHR 206 RD FL A EA+++GLVD + R Sbjct: 196 RDTFLEAEEAMKFGLVDKVFESR 218 >UniRef50_Q8DJZ9 ATP-dependent Clp protease proteolytic subunit 2 n=20 Tax=cellular organisms RepID=CLPP2_THEEB Length = 198 Score = 286 bits (732), Expect = 4e-76, Method: Composition-based stats. Identities = 118/191 (61%), Positives = 148/191 (77%), Gaps = 1/191 (0%) Query: 17 VPMVIEQTSRGERSFDIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLY 76 VP + + DIY+RL +ER+IFL +V+D +AN IVA ML+L++E+P KDI LY Sbjct: 8 VPYRLPGEPYTQ-WIDIYNRLYRERIIFLGKEVDDEIANQIVAVMLYLDSEDPGKDIMLY 66 Query: 77 INSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIH 136 INSPGG +TAGM+IYDTMQ IK DV TIC+G AASMG+FLL AG KGKR LP+SR+MIH Sbjct: 67 INSPGGSVTAGMAIYDTMQHIKSDVVTICVGLAASMGSFLLAAGTKGKRLALPHSRIMIH 126 Query: 137 QPLGGYQGQATDIEIHAREILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEAVEY 196 QP GG +GQATDIEI AREIL+V+ ++NEL A HTGQ LE+IERD +RD F+SA EA Y Sbjct: 127 QPSGGTRGQATDIEIEAREILRVRRQLNELYAYHTGQPLEKIERDMDRDFFMSAEEAKNY 186 Query: 197 GLVDSILTHRN 207 GL+D ++ R+ Sbjct: 187 GLIDRVIEERS 197 >UniRef50_Q11J60 ATP-dependent Clp protease proteolytic subunit 1 n=24 Tax=cellular organisms RepID=CLPP1_MESSB Length = 210 Score = 284 bits (727), Expect = 1e-75, Method: Composition-based stats. Identities = 126/200 (63%), Positives = 164/200 (82%) Query: 7 RDNFAPHMALVPMVIEQTSRGERSFDIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEA 66 ++ M LVPMV+EQT+RGER++DI+SRLLKER+IF+TG VED MA L+ AQ+LFLEA Sbjct: 2 KNPVETAMNLVPMVVEQTNRGERAYDIFSRLLKERIIFITGPVEDGMATLVCAQLLFLEA 61 Query: 67 ENPEKDIYLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRF 126 ENP+K+I LYINSPGGV+T+GM+IYDTMQFI+P VST+C+GQAASMG+ LL AG K RF Sbjct: 62 ENPKKEIALYINSPGGVVTSGMAIYDTMQFIQPPVSTLCIGQAASMGSLLLCAGHKDMRF 121 Query: 127 CLPNSRVMIHQPLGGYQGQATDIEIHAREILKVKGRMNELMALHTGQSLEQIERDTERDR 186 PN+RVM+HQP GG+QGQA+DIE HA++I+K+K R+NE+ HTGQ + IER +RD Sbjct: 122 ATPNARVMVHQPSGGFQGQASDIERHAQDIIKLKRRLNEIYVKHTGQDYDTIERTLDRDH 181 Query: 187 FLSAPEAVEYGLVDSILTHR 206 F++A EA +GLVD +++ R Sbjct: 182 FMTADEAQAFGLVDRVISER 201 >UniRef50_A6Q675 ATP-dependent Clp protease proteolytic subunit n=60 Tax=cellular organisms RepID=CLPP_SULNB Length = 195 Score = 283 bits (725), Expect = 2e-75, Method: Composition-based stats. Identities = 125/192 (65%), Positives = 166/192 (86%) Query: 14 MALVPMVIEQTSRGERSFDIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDI 73 M+ +P V+EQT RGERS+DIYSRLLK+R+I L+G+V D +A+ IVAQ+LFLEA++P+KDI Sbjct: 1 MSYIPYVVEQTGRGERSYDIYSRLLKDRIIMLSGEVNDQVASSIVAQLLFLEAQDPDKDI 60 Query: 74 YLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRV 133 Y YINSPGGVIT+G+S++DTM +IKPD+ TIC+GQAASMGAFLL +G KGKR+ LP++R+ Sbjct: 61 YFYINSPGGVITSGLSMFDTMNYIKPDIVTICIGQAASMGAFLLASGTKGKRYALPHARI 120 Query: 134 MIHQPLGGYQGQATDIEIHAREILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEA 193 MIHQP GG QGQ+TDI+I A+EI ++K +NE+MA TG++ ++IE+DTERD F+SA EA Sbjct: 121 MIHQPSGGAQGQSTDIQIQAQEIQRLKDTLNEIMAEKTGKTAKRIEKDTERDNFMSAKEA 180 Query: 194 VEYGLVDSILTH 205 VEYGL+D +LT Sbjct: 181 VEYGLIDKVLTK 192 >UniRef50_Q2RZ59 ATP-dependent Clp protease proteolytic subunit 2 n=82 Tax=Bacteria RepID=CLPP2_SALRD Length = 233 Score = 280 bits (717), Expect = 2e-74, Method: Composition-based stats. Identities = 119/196 (60%), Positives = 155/196 (79%) Query: 12 PHMALVPMVIEQTSRGERSFDIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEK 71 P LVPMV+EQT+RGER++DI+SRLLKER++F+ + D +ANL VAQ+L+L +E+ EK Sbjct: 17 PMSGLVPMVVEQTTRGERAYDIFSRLLKERIVFIGTPINDQIANLTVAQLLYLASESSEK 76 Query: 72 DIYLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNS 131 I LYINSPGGVI +G+ +YDTMQ+I VSTIC+G AASMG+ LL AG R CLPNS Sbjct: 77 PINLYINSPGGVIYSGLGVYDTMQYIGAPVSTICVGLAASMGSVLLAAGEDDSRACLPNS 136 Query: 132 RVMIHQPLGGYQGQATDIEIHAREILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAP 191 RVMIHQP+GG +GQA+DIEI A EI+ +K R+ E++ALHTGQ ++QIE D +R+ ++SA Sbjct: 137 RVMIHQPMGGAEGQASDIEIQAEEIMWLKERLYEILALHTGQDIDQIEADADRNYWMSAE 196 Query: 192 EAVEYGLVDSILTHRN 207 EA EYGLVD++L N Sbjct: 197 EAEEYGLVDNVLNPDN 212 >UniRef50_Q1PW15 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1PW15_9BACT Length = 224 Score = 279 bits (714), Expect = 4e-74, Method: Composition-based stats. Identities = 110/206 (53%), Positives = 152/206 (73%), Gaps = 4/206 (1%) Query: 4 SGERDNFAPHMA----LVPMVIEQTSRGERSFDIYSRLLKERVIFLTGQVEDHMANLIVA 59 +G + +P M VP V+E+T GER +DI+SRLLK+R+IF+ +ED + NL++A Sbjct: 11 NGAFPDVSPQMKQGALFVPYVVEKTGHGERHYDIFSRLLKDRIIFIGSAIEDTLTNLVIA 70 Query: 60 QMLFLEAENPEKDIYLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTA 119 Q+LFL+ EN +DI +YINSPGG ITAG++IYDTMQF++ DV+T C+GQA SM A LL Sbjct: 71 QILFLQNENKNQDINIYINSPGGSITAGLAIYDTMQFVQCDVATFCIGQAYSMAAILLAG 130 Query: 120 GAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREILKVKGRMNELMALHTGQSLEQIE 179 G K KRF LP++R+M+HQP GG +G ATDI I A EILK+K +NE++ HTGQ LE+IE Sbjct: 131 GTKNKRFGLPHTRIMLHQPWGGMRGTATDISIQAEEILKMKKCLNEILVKHTGQPLERIE 190 Query: 180 RDTERDRFLSAPEAVEYGLVDSILTH 205 D +RD ++S+ +A EYGL+D ++ Sbjct: 191 ADVDRDFYMSSHDAKEYGLIDEVIES 216 >UniRef50_Q0CXE7 ATP-dependent Clp protease proteolytic subunit n=15 Tax=Dikarya RepID=Q0CXE7_ASPTN Length = 258 Score = 277 bits (709), Expect = 2e-73, Method: Composition-based stats. Identities = 113/204 (55%), Positives = 152/204 (74%), Gaps = 6/204 (2%) Query: 9 NFAPHMALVP--MVIEQTSRGERSFDIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEA 66 N +P A P V E G ++DI+SRLLKER+I L G+V++ M+ IVAQ+LFLEA Sbjct: 38 NTSPPRAWTPTPFVTETVGGGWHTYDIFSRLLKERIICLNGEVDETMSASIVAQLLFLEA 97 Query: 67 ENPEKDIYLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRF 126 +NP+K I+LYINSPGG +TAG++IYDTM +I VSTIC+GQAASMG+ LL G GKR+ Sbjct: 98 DNPQKPIHLYINSPGGSVTAGLAIYDTMTYIASPVSTICVGQAASMGSLLLCGGHPGKRY 157 Query: 127 CLPNSRVMIHQPLGGYQGQATDIEIHAREILKVKGRMNELMALH-TGQ---SLEQIERDT 182 CLP+S +M+HQP GGY GQA+DI IHA+EIL+V+ ++N++ H TG+ SLE+IE+ Sbjct: 158 CLPHSSIMMHQPSGGYFGQASDIAIHAKEILRVREQLNKIYKRHLTGKKEMSLEEIEKLM 217 Query: 183 ERDRFLSAPEAVEYGLVDSILTHR 206 ERD F+ A EA++ G+VD +L R Sbjct: 218 ERDYFMGAKEALDMGIVDEVLDRR 241 >UniRef50_D0WES0 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Slackia exigua ATCC 700122 RepID=D0WES0_9ACTN Length = 255 Score = 274 bits (701), Expect = 1e-72, Method: Composition-based stats. Identities = 111/192 (57%), Positives = 149/192 (77%), Gaps = 2/192 (1%) Query: 17 VPMVIEQTSRGERSFDIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLY 76 +P VIEQ+ RGERS+DIYSRLL +R++FL ++D +AN++VAQ+L LE+ +PEKDI LY Sbjct: 57 IPYVIEQSPRGERSYDIYSRLLNDRIVFLGDAIDDGVANIVVAQLLHLESSDPEKDISLY 116 Query: 77 INSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIH 136 INSPGG ++AG++IYD MQFI+ DVST+C+G AASM + L AGA GKRF PNS++MIH Sbjct: 117 INSPGGSVSAGLAIYDAMQFIRCDVSTVCLGMAASMASVLTAAGAPGKRFVTPNSQIMIH 176 Query: 137 QPLGGY--QGQATDIEIHAREILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEAV 194 QP+GG + Q TD +I A E+ K + R+ L+A HTG+++EQI D+ERD +L+A EA Sbjct: 177 QPMGGSGERTQQTDFDILANEMRKTRDRLEGLLATHTGKTVEQIHADSERDHWLTAEEAK 236 Query: 195 EYGLVDSILTHR 206 YGLVD I+T R Sbjct: 237 AYGLVDDIITSR 248 >UniRef50_Q7UK66 ATP-dependent Clp protease proteolytic subunit 2 n=27 Tax=cellular organisms RepID=CLPP2_RHOBA Length = 195 Score = 273 bits (700), Expect = 2e-72, Method: Composition-based stats. Identities = 123/190 (64%), Positives = 158/190 (83%) Query: 14 MALVPMVIEQTSRGERSFDIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDI 73 M ++P V+E R ER++DIYSRLLK+R+IFL QV+D ++N +VAQMLFL+A++P+KDI Sbjct: 1 MPVIPYVVESNGREERTYDIYSRLLKDRIIFLGQQVDDQISNALVAQMLFLQADDPKKDI 60 Query: 74 YLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRV 133 ++YINSPGG ITAGM+IYDTMQF+ DV+T C+GQAASMGA LLTAGAKGKRF LPN+R+ Sbjct: 61 HMYINSPGGSITAGMAIYDTMQFVSCDVATYCIGQAASMGAVLLTAGAKGKRFALPNARI 120 Query: 134 MIHQPLGGYQGQATDIEIHAREILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEA 193 MIHQPL G QG A ++EIH E+ ++K RMNE+M HTG SLE+IE DT+RDRF+SA EA Sbjct: 121 MIHQPLAGMQGTAREVEIHVAELRRIKQRMNEIMIEHTGHSLEKIEEDTDRDRFMSADEA 180 Query: 194 VEYGLVDSIL 203 YGL+D ++ Sbjct: 181 CSYGLIDKVV 190 >UniRef50_Q9S834 ATP-dependent Clp protease proteolytic subunit 5, chloroplastic n=29 Tax=cellular organisms RepID=CLPP5_ARATH Length = 298 Score = 270 bits (692), Expect = 1e-71, Method: Composition-based stats. Identities = 112/207 (54%), Positives = 147/207 (71%), Gaps = 4/207 (1%) Query: 3 YSGERDNFAPHMALVPMVIEQTSR----GERSFDIYSRLLKERVIFLTGQVEDHMANLIV 58 +S D P P + ER I S+L + R+I G V+D MAN+IV Sbjct: 81 WSIRDDLQVPSSPYFPAYAQGQGPPPMVQERFQSIISQLFQYRIIRCGGAVDDDMANIIV 140 Query: 59 AQMLFLEAENPEKDIYLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLT 118 AQ+L+L+A +P KDI +Y+NSPGG +TAGM+I+DTM+ I+PDVST+C+G AASMGAFLL+ Sbjct: 141 AQLLYLDAVDPTKDIVMYVNSPGGSVTAGMAIFDTMRHIRPDVSTVCVGLAASMGAFLLS 200 Query: 119 AGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREILKVKGRMNELMALHTGQSLEQI 178 AG KGKR+ LPNSR+MIHQPLGG QG TDI+I A E+L K +N +A HTGQSLE+I Sbjct: 201 AGTKGKRYSLPNSRIMIHQPLGGAQGGQTDIDIQANEMLHHKANLNGYLAYHTGQSLEKI 260 Query: 179 ERDTERDRFLSAPEAVEYGLVDSILTH 205 +DT+RD F+SA EA EYGL+D ++ + Sbjct: 261 NQDTDRDFFMSAKEAKEYGLIDGVIMN 287 >UniRef50_Q64NW2 ATP-dependent Clp protease proteolytic subunit n=73 Tax=cellular organisms RepID=CLPP_BACFR Length = 220 Score = 258 bits (660), Expect = 8e-68, Method: Composition-based stats. Identities = 100/197 (50%), Positives = 143/197 (72%) Query: 10 FAPHMALVPMVIEQTSRGERSFDIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENP 69 + L P ++E+ D++SRL+ +R+IFL Q++D+ AN + AQ+L+L++ +P Sbjct: 24 KSQAGYLNPYILEERQLNVTQLDVFSRLMMDRIIFLGTQIDDYTANTLQAQLLYLDSVDP 83 Query: 70 EKDIYLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLP 129 KDI +YINSPGG + AG+ IYDTMQFI DV+TIC G AASM + LL AGAKGKR LP Sbjct: 84 GKDISIYINSPGGSVYAGLGIYDTMQFISSDVATICTGMAASMASVLLVAGAKGKRSALP 143 Query: 130 NSRVMIHQPLGGYQGQATDIEIHAREILKVKGRMNELMALHTGQSLEQIERDTERDRFLS 189 +SRVMIHQP+GG QGQA+DIEI AREI K+K + ++A H+G S +++ D++RD +++ Sbjct: 144 HSRVMIHQPMGGAQGQASDIEITAREIQKLKKELYTIIADHSGTSFDKVWADSDRDYWMT 203 Query: 190 APEAVEYGLVDSILTHR 206 A EA EYG++D +L + Sbjct: 204 AQEAKEYGMIDEVLIKK 220 >UniRef50_C1FDX2 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Micromonas sp. RCC299 RepID=C1FDX2_9CHLO Length = 272 Score = 256 bits (655), Expect = 3e-67, Method: Composition-based stats. Identities = 103/178 (57%), Positives = 140/178 (78%) Query: 28 ERSFDIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAG 87 ER + S+L+ +R+I L G V+D NLIVAQ+L+L+A +P+KDI LY+NSPGG +TAG Sbjct: 77 ERFQGVASQLMNQRIIRLGGAVDDDSCNLIVAQLLWLDATDPKKDITLYVNSPGGSVTAG 136 Query: 88 MSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQAT 147 M+++DTM+ ++PD+ST+C+G AASMGAFLL +G +GKRF LPNSR+MIHQPLGG QGQA Sbjct: 137 MAVFDTMRHVRPDISTVCVGLAASMGAFLLASGQQGKRFSLPNSRIMIHQPLGGAQGQAA 196 Query: 148 DIEIHAREILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEAVEYGLVDSILTH 205 DIEI A EI+ K +N +A TG+ L+ + +DT+RD F+SA EA EYGL+DS++ H Sbjct: 197 DIEIQANEIMHHKSTLNGYLAEFTGKPLDTVMQDTDRDFFMSAFEAKEYGLIDSVIEH 254 >UniRef50_Q2JHM1 ATP-dependent Clp protease proteolytic subunit 1 n=133 Tax=cellular organisms RepID=CLPP1_SYNJB Length = 203 Score = 255 bits (653), Expect = 6e-67, Method: Composition-based stats. Identities = 109/192 (56%), Positives = 143/192 (74%), Gaps = 2/192 (1%) Query: 17 VPMVIEQTSRGERSFDIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLY 76 VP + + + RL +ER++F+ ++D +AN IV ML+L +++P+KDI +Y Sbjct: 8 VPYRLPGEPYSQ-WISLDDRLYQERILFIGEPIDDSLANTIVGVMLYLNSQDPQKDIVMY 66 Query: 77 INSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIH 136 INSPGG +TAGM+IYDTM IKPD+ T+C+GQAASMGAFLL AG KGKRF LP+SR+M+H Sbjct: 67 INSPGGSVTAGMAIYDTMNHIKPDIVTVCVGQAASMGAFLLAAGTKGKRFALPHSRIMLH 126 Query: 137 QPL-GGYQGQATDIEIHAREILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEAVE 195 QP G QGQA+DIEI ARE L+VK RMNE++A TGQ LE+IERD ERD +LSA EA Sbjct: 127 QPSLGTIQGQASDIEIRARETLRVKRRMNEILAQTTGQPLEKIERDVERDFYLSATEAQA 186 Query: 196 YGLVDSILTHRN 207 YG+VD ++ R+ Sbjct: 187 YGIVDRVIQERS 198 >UniRef50_Q27539 ATP-dependent Clp protease proteolytic subunit, mitochondrial n=788 Tax=cellular organisms RepID=CLPP_CAEEL Length = 221 Score = 253 bits (648), Expect = 2e-66, Method: Composition-based stats. Identities = 102/190 (53%), Positives = 145/190 (76%) Query: 17 VPMVIEQTSRGERSFDIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLY 76 +P VI+ +GER++DIYSRLL++R++ L V+D +A+ ++AQ+LFL++E+ +K I++Y Sbjct: 26 IPFVIDNEGKGERTYDIYSRLLRDRIVCLMTPVDDFIASALIAQLLFLQSESGKKPIHMY 85 Query: 77 INSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIH 136 INSPGG +TAG++IYDT+Q I VST +GQA+SMG+ LL AG KG R LPNSR+M+H Sbjct: 86 INSPGGSVTAGLAIYDTIQMISAPVSTWVIGQASSMGSLLLCAGEKGMRSALPNSRIMVH 145 Query: 137 QPLGGYQGQATDIEIHAREILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEAVEY 196 QP GG QG +DI I A EI ++K R+NE+ HTG S ++IE+ +RDRF+SA EA+++ Sbjct: 146 QPSGGAQGTCSDIVIRAEEITRLKRRLNEIYVHHTGMSYDEIEKTLDRDRFMSAHEALKF 205 Query: 197 GLVDSILTHR 206 GLVD I TH Sbjct: 206 GLVDQIETHN 215 >UniRef50_Q4JWV4 ATP-dependent Clp protease proteolytic subunit 1 n=24 Tax=Actinobacteria (class) RepID=CLPP1_CORJK Length = 188 Score = 248 bits (633), Expect = 1e-64, Method: Composition-based stats. Identities = 95/173 (54%), Positives = 128/173 (73%) Query: 33 IYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIYD 92 +Y RLL+ER+IFL QV+D +AN + AQ+L L AE+P +DI LYINSPGG +TAGM+IYD Sbjct: 12 VYERLLRERIIFLGSQVDDEIANELCAQILLLSAEDPTRDISLYINSPGGSVTAGMAIYD 71 Query: 93 TMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIH 152 TM++ D++T MG AASMG FLL+AG KGKR+ LP++R+M+HQP G G A DI I Sbjct: 72 TMKYAPCDIATYGMGLAASMGQFLLSAGTKGKRYALPHARIMMHQPSAGVGGTAADIAIQ 131 Query: 153 AREILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEAVEYGLVDSILTH 205 A + K M EL+A TGQ++EQI +D++RDR+ +A +A EYG VD ++T Sbjct: 132 AEQFAYTKREMAELIAEFTGQTVEQITKDSDRDRWFTAQQAKEYGFVDHVITS 184 >UniRef50_Q7UK67 ATP-dependent Clp protease proteolytic subunit 1 n=3 Tax=Planctomycetaceae RepID=CLPP1_RHOBA Length = 227 Score = 247 bits (632), Expect = 1e-64, Method: Composition-based stats. Identities = 95/182 (52%), Positives = 134/182 (73%) Query: 22 EQTSRGERSFDIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPG 81 Q+ + +R + LL+ R++F+ G++ AN IV ++L+L++EN KDI+LYINSPG Sbjct: 35 YQSYQRQRQMTLGDLLLENRIVFMQGEIHYANANEIVMKLLYLQSENRRKDIHLYINSPG 94 Query: 82 GVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGG 141 G +TA ++IYDTMQ + V+T C+G+A S A LL GAKGKRFCLPNSRVM+HQPLGG Sbjct: 95 GSVTATLAIYDTMQMLSCPVATYCVGEACSGAAVLLIGGAKGKRFCLPNSRVMMHQPLGG 154 Query: 142 YQGQATDIEIHAREILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEAVEYGLVDS 201 GQ +DIEI A E+ + + ++NE+++ H G+S+EQI +DT+RD FL A +A EYGLVD Sbjct: 155 VSGQVSDIEIQAAEMFRYRDKLNEIISSHCGKSVEQIAKDTDRDFFLDAQQAKEYGLVDD 214 Query: 202 IL 203 +L Sbjct: 215 LL 216 >UniRef50_Q05FR8 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Candidatus Carsonella ruddii PV RepID=CLPP_CARRP Length = 194 Score = 247 bits (631), Expect = 2e-64, Method: Composition-based stats. Identities = 111/193 (57%), Positives = 157/193 (81%), Gaps = 1/193 (0%) Query: 14 MALVPMVIEQTSRGERSFDIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDI 73 M +P VI++ +G+R D+YS++LKERVI+L G +ED MA+LIV+Q++FL++EN KDI Sbjct: 1 MIFLPTVIDKNIKGDRFLDLYSKMLKERVIYLNGAIEDTMASLIVSQLMFLDSENS-KDI 59 Query: 74 YLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRV 133 LYINSPGGV+++G+SIYDT+QF+K DVSTIC+GQAASM A LL AG KGKRFC PNSR+ Sbjct: 60 ILYINSPGGVVSSGLSIYDTIQFLKSDVSTICIGQAASMAAVLLAAGKKGKRFCFPNSRI 119 Query: 134 MIHQPLGGYQGQATDIEIHAREILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEA 193 MIHQPLG QGQA+D+EIHARE++ +K + E+++ HT S+ QI +DT+RD F++ + Sbjct: 120 MIHQPLGYAQGQASDVEIHAREMINIKQILCEILSSHTNNSIFQIFKDTDRDNFMNCKQT 179 Query: 194 VEYGLVDSILTHR 206 ++YG++D++L + Sbjct: 180 LKYGIIDNVLYKK 192 >UniRef50_A4RXD2 ATP-dependent Clp protease proteolytic subunit n=3 Tax=cellular organisms RepID=A4RXD2_OSTLU Length = 319 Score = 245 bits (626), Expect = 7e-64, Method: Composition-based stats. Identities = 98/201 (48%), Positives = 138/201 (68%), Gaps = 5/201 (2%) Query: 3 YSGERDNFAPHMALVPMVIEQTSRGERSFDIYSRLLKERVIFLTGQVEDHMANLIVAQML 62 Y + AP P+V S + LL+ R++FL QV+D A+ +++Q+L Sbjct: 75 YDAVNASGAPGARAGPVVPRDQSG-----SPFDSLLRNRIVFLGSQVDDFNADAVISQLL 129 Query: 63 FLEAENPEKDIYLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAK 122 L+ ++P K+I L+INSPGG +TAGM IYD MQF + VST+C+G AASMGAFLL +G K Sbjct: 130 LLDQQDPTKEIKLFINSPGGSVTAGMGIYDAMQFCRAPVSTVCLGLAASMGAFLLASGEK 189 Query: 123 GKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREILKVKGRMNELMALHTGQSLEQIERDT 182 G+R +PN+R+MIHQPLGG QG A DIEI A+EI+ K +N LMA HTGQ ++ I+ DT Sbjct: 190 GRRMSMPNARIMIHQPLGGAQGSAVDIEIQAKEIMHHKANLNRLMAFHTGQDVKTIDEDT 249 Query: 183 ERDRFLSAPEAVEYGLVDSIL 203 +RDR++S EA +YG++D ++ Sbjct: 250 DRDRYMSPLEAKQYGVIDIVI 270 >UniRef50_A8RFM5 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Eubacterium dolichum DSM 3991 RepID=A8RFM5_9FIRM Length = 204 Score = 243 bits (620), Expect = 3e-63, Method: Composition-based stats. Identities = 99/200 (49%), Positives = 143/200 (71%), Gaps = 1/200 (0%) Query: 6 ERDNFAPHMALVPMVIEQTSRGERSFDIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLE 65 ER+ ++ +VP +IE+ GE ++D+YS LLKER+I L G+++D M+ I AQ+L+L Sbjct: 2 EREKEVIYLVIVPTIIEKNINGEHAYDLYSCLLKERIIILCGEIDDAMSASICAQLLYL- 60 Query: 66 AENPEKDIYLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKR 125 + + I LYINS GG +TAG++IYD M +I +VSTICMG ASM A LL AG+ GKR Sbjct: 61 STCSKAPIQLYINSNGGSVTAGLAIYDIMHYIPCEVSTICMGMCASMAAVLLCAGSNGKR 120 Query: 126 FCLPNSRVMIHQPLGGYQGQATDIEIHAREILKVKGRMNELMALHTGQSLEQIERDTERD 185 F L NS +MIHQPLGG QGQA D+EI A+ I +VK ++ +++ HT Q + I RD +RD Sbjct: 121 FALANSEIMIHQPLGGMQGQAIDMEIAAQHIQQVKEKLYQILCKHTKQDKDIIIRDCDRD 180 Query: 186 RFLSAPEAVEYGLVDSILTH 205 +++A +A++YG+VD I+T+ Sbjct: 181 FYMNAKQALDYGMVDEIITN 200 >UniRef50_UPI00016C35C0 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Gemmata obscuriglobus UQM 2246 RepID=UPI00016C35C0 Length = 208 Score = 242 bits (619), Expect = 5e-63, Method: Composition-based stats. Identities = 92/200 (46%), Positives = 133/200 (66%) Query: 6 ERDNFAPHMALVPMVIEQTSRGERSFDIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLE 65 D A P++ +R+ + LL++R+IFL + + +A L++ Q+L+LE Sbjct: 4 PFDPTAAAGPFEPLLQRGQYARQRTLTLDDLLLEQRIIFLNWPINNDVATLVIKQLLYLE 63 Query: 66 AENPEKDIYLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKR 125 E +DI LYINSPGG ++A ++IYDTMQF++ ++T CMG AAS A LL AG+ KR Sbjct: 64 YEKKSEDISLYINSPGGSVSATLAIYDTMQFMQSPINTFCMGLAASGAAVLLAAGSPKKR 123 Query: 126 FCLPNSRVMIHQPLGGYQGQATDIEIHAREILKVKGRMNELMALHTGQSLEQIERDTERD 185 + +PNS+VMIHQP G GQ +DIEI A EIL+ +GR+NE++A HTGQ +E I R+T+RD Sbjct: 124 YAMPNSKVMIHQPYGQVGGQVSDIEIQANEILRERGRLNEILAKHTGQPVEIIARETDRD 183 Query: 186 RFLSAPEAVEYGLVDSILTH 205 ++ A EA +GLVD +L Sbjct: 184 KYYHADEAKAFGLVDEVLVR 203 >UniRef50_Q2J9A8 ATP-dependent Clp protease proteolytic subunit 4 n=152 Tax=Bacteria RepID=CLPP4_FRASC Length = 238 Score = 241 bits (616), Expect = 1e-62, Method: Composition-based stats. Identities = 98/190 (51%), Positives = 136/190 (71%), Gaps = 2/190 (1%) Query: 20 VIEQTSRGERSFD--IYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYI 77 ++ + G S D ++SRLL+ R++FL VED +AN I A++L L AE+P DIYLYI Sbjct: 20 TVQAAASGLGSADDQVFSRLLENRIVFLGSVVEDAVANAISAKLLLLAAEDPAADIYLYI 79 Query: 78 NSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQ 137 NSPGG ++AGM+IYDTMQ++ DV+T+ +G A SMG FLL AG GKR+ LP++R+M+HQ Sbjct: 80 NSPGGSVSAGMAIYDTMQYVGNDVATVALGLAGSMGQFLLCAGTAGKRYALPHARIMMHQ 139 Query: 138 PLGGYQGQATDIEIHAREILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEAVEYG 197 P GG G A DI I A ++L K + E +A HTGQ++EQIE D++RDR+ +A EA EYG Sbjct: 140 PHGGIGGTAADISIQAEQMLYTKRTLQERIAFHTGQTVEQIETDSDRDRWFTAEEAKEYG 199 Query: 198 LVDSILTHRN 207 LVD ++ + Sbjct: 200 LVDHVVVRAD 209 >UniRef50_Q9SXJ6 ATP-dependent Clp protease proteolytic subunit 3, chloroplastic n=21 Tax=Embryophyta RepID=CLPP3_ARATH Length = 309 Score = 240 bits (614), Expect = 2e-62, Method: Composition-based stats. Identities = 93/174 (53%), Positives = 134/174 (77%) Query: 31 FDIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSI 90 D + LL++R++FL QV+D A+L+++Q+L L+AE+ E+DI L+INSPGG ITAGM I Sbjct: 84 LDTTNMLLRQRIVFLGSQVDDMTADLVISQLLLLDAEDSERDITLFINSPGGSITAGMGI 143 Query: 91 YDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIE 150 YD M+ K DVST+C+G AASMGAFLL +G+KGKR+C+PNS+VMIHQPLG G+AT++ Sbjct: 144 YDAMKQCKADVSTVCLGLAASMGAFLLASGSKGKRYCMPNSKVMIHQPLGTAGGKATEMS 203 Query: 151 IHAREILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEAVEYGLVDSILT 204 I RE++ K ++N++ + TG+ +IE DT+RD FL+ EA EYGL+D+++ Sbjct: 204 IRIREMMYHKIKLNKIFSRITGKPESEIESDTDRDNFLNPWEAKEYGLIDAVID 257 >UniRef50_Q47MU3 ATP-dependent Clp protease proteolytic subunit 1 n=82 Tax=Bacteria RepID=CLPP1_THEFY Length = 222 Score = 238 bits (609), Expect = 6e-62, Method: Composition-based stats. Identities = 104/207 (50%), Positives = 147/207 (71%), Gaps = 2/207 (0%) Query: 3 YSGERDNFAPHMALV-PMVIEQTSRGERSFDIYSRLLKERVIFLTGQVEDHMANLIVAQM 61 Y G AP V P IE+T+ G + + Y++L +ER+IF+ Q++D AN I+AQM Sbjct: 12 YGGGMAPMAPQSRYVLPSYIERTAYGVKEMNPYNKLFEERIIFVGVQIDDTSANDIIAQM 71 Query: 62 LFLEAENPEKDIYLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGA 121 + LE + ++DI LYINSPGG T+ M+IYDTMQF++PD+ T+C+GQAAS A LL G Sbjct: 72 MTLEHIDSDRDITLYINSPGGSFTSLMAIYDTMQFVRPDIQTVCVGQAASAAAVLLAGGT 131 Query: 122 KGKRFCLPNSRVMIHQPLG-GYQGQATDIEIHAREILKVKGRMNELMALHTGQSLEQIER 180 KGKR LPNSR++IHQP G GQA+D+EI A EI++++ ++ ++A HTG+S+E+I R Sbjct: 132 KGKRTALPNSRILIHQPATEGTHGQASDVEIMANEIMRIRHQLETILAKHTGRSVEEISR 191 Query: 181 DTERDRFLSAPEAVEYGLVDSILTHRN 207 D ERD+ L+A EA EYG+VD +L +R Sbjct: 192 DIERDKILTAEEAKEYGIVDDVLPYRK 218 >UniRef50_C0M7M8 ATP-dependent Clp protease proteolytic subunit n=38 Tax=Bacteria RepID=CLPP_STRE4 Length = 196 Score = 237 bits (604), Expect = 3e-61, Method: Composition-based stats. Identities = 106/193 (54%), Positives = 149/193 (77%), Gaps = 2/193 (1%) Query: 16 LVPMVIEQTSRGERSFDIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYL 75 ++P+VIEQTSRGERS+DIYSRLLK+R+I LTG VED+MAN ++AQ+LFL+A++ KDIYL Sbjct: 1 MIPVVIEQTSRGERSYDIYSRLLKDRIIMLTGPVEDNMANSVIAQLLFLDAQDNTKDIYL 60 Query: 76 YINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMI 135 Y+N+PGG ++AG++I DTM FIK DV TI MG AASMG + ++GAKGKRF LPN+ MI Sbjct: 61 YVNTPGGSVSAGLAIVDTMNFIKADVQTIVMGMAASMGTVIASSGAKGKRFMLPNAEYMI 120 Query: 136 HQPL--GGYQGQATDIEIHAREILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEA 193 HQP+ G Q TD+ I A +LK + R+ +++A + G++++QI +D ERD ++SA E Sbjct: 121 HQPMGGTGGGTQQTDMAIAAEHLLKTRHRLEKILAQNAGKTIKQIHKDAERDYWMSAEET 180 Query: 194 VEYGLVDSILTHR 206 + YG +D I+ + Sbjct: 181 LAYGFIDEIMENN 193 >UniRef50_Q5Z0M4 ATP-dependent Clp protease proteolytic subunit 1 n=2 Tax=Actinomycetales RepID=CLPP1_NOCFA Length = 197 Score = 236 bits (602), Expect = 4e-61, Method: Composition-based stats. Identities = 84/195 (43%), Positives = 132/195 (67%), Gaps = 1/195 (0%) Query: 13 HMALVPMVIEQTSRG-ERSFDIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEK 71 +P VI Q RG ER DIYS LL ER+++L ++ +AN ++AQ+L LE+E+P++ Sbjct: 2 STYTIPNVIAQHPRGGERITDIYSHLLAERIVYLGTPIDSGVANALIAQLLHLESESPDQ 61 Query: 72 DIYLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNS 131 +I YIN GG + + +++YDTMQ I V T C+GQA ++GA LL GA G+R LP++ Sbjct: 62 EINFYINCEGGDLPSMLAVYDTMQHIGAPVHTTCVGQAIAVGAVLLAGGAPGQRAMLPHA 121 Query: 132 RVMIHQPLGGYQGQATDIEIHAREILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAP 191 RV++HQP QG D+ + A E+++++ + +++ HTG+S EQ+ DT+RDR +A Sbjct: 122 RVVLHQPAARGQGPIPDLILQADELVRMRSEIEAILSRHTGRSPEQLREDTDRDRVFTAT 181 Query: 192 EAVEYGLVDSILTHR 206 A+EYGL+D++L+ R Sbjct: 182 AALEYGLIDTVLSPR 196 >UniRef50_Q9MUV8 ATP-dependent Clp protease proteolytic subunit n=4 Tax=Viridiplantae RepID=CLPP_MESVI Length = 229 Score = 235 bits (599), Expect = 1e-60, Method: Composition-based stats. Identities = 79/193 (40%), Positives = 124/193 (64%), Gaps = 2/193 (1%) Query: 17 VPMVIEQTSRG--ERSFDIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIY 74 +P V + D+Y+RL +ER++FL ++D +AN ++ M+FL +E+ K I+ Sbjct: 5 IPKVAYRIPGEAVSTYVDVYNRLYRERILFLGEDLDDEVANQLIGVMVFLNSEDDTKGIF 64 Query: 75 LYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVM 134 YINSPGG + AG+ +YD +Q + DV+TICMG AASM +F+L G G+R P++RVM Sbjct: 65 FYINSPGGSMNAGLGVYDMIQHVNVDVTTICMGLAASMASFILAGGTPGQRLMFPHARVM 124 Query: 135 IHQPLGGYQGQATDIEIHAREILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEAV 194 +HQP+GG G+A + + E+ +++ + L TGQSLE+I +D RD F+ +A Sbjct: 125 LHQPMGGNGGKAKYMVEESVEVKRLRELIAHLYVKRTGQSLEKIRKDMNRDNFMRPRQAK 184 Query: 195 EYGLVDSILTHRN 207 EYGL+D ++T+ N Sbjct: 185 EYGLIDHMVTNVN 197 >UniRef50_D1BZJ7 ATP-dependent Clp protease proteolytic subunit n=27 Tax=Actinobacteridae RepID=D1BZJ7_XYLCX Length = 236 Score = 233 bits (596), Expect = 2e-60, Method: Composition-based stats. Identities = 96/197 (48%), Positives = 144/197 (73%), Gaps = 2/197 (1%) Query: 13 HMALVPMVIEQTSRGERSFDIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKD 72 ++P E+T+ G + D Y++L ++R+IFL QV+D A+ ++AQ+L LE+++P++D Sbjct: 33 SRYVLPQFEERTAYGFKRQDPYTKLFEDRIIFLGVQVDDASADDVMAQLLVLESQDPDRD 92 Query: 73 IYLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSR 132 I +YINSPGG TA ++YDTMQ+IKP + T+C+GQAAS A LL AG KGKR+ LPN+R Sbjct: 93 IMMYINSPGGSFTAMTALYDTMQYIKPQIQTVCLGQAASAAAVLLAAGQKGKRYALPNAR 152 Query: 133 VMIHQPL--GGYQGQATDIEIHAREILKVKGRMNELMALHTGQSLEQIERDTERDRFLSA 190 V+IHQP GG QA+DIEIHA E+++++ + E +A H+G++ EQ++ D ERD+ L+A Sbjct: 153 VLIHQPAMEGGGYAQASDIEIHANELIRMREWLEETLASHSGRTPEQVKEDIERDKILTA 212 Query: 191 PEAVEYGLVDSILTHRN 207 +A +YGLVD +L R Sbjct: 213 AQAKDYGLVDLVLESRK 229 >UniRef50_Q94B60 ATP-dependent Clp protease proteolytic subunit 4, chloroplastic n=12 Tax=Embryophyta RepID=CLPP4_ARATH Length = 292 Score = 231 bits (590), Expect = 1e-59, Method: Composition-based stats. Identities = 92/196 (46%), Positives = 137/196 (69%), Gaps = 1/196 (0%) Query: 9 NFAPHMALVPMVIEQTSRGERSFDIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAEN 68 FA + E RG S D+ LL+ER++FL ++D +A+ I++Q+L L+A++ Sbjct: 57 RFANASIEMSQTQESAIRGAES-DVMGLLLRERIVFLGSSIDDFVADAIMSQLLLLDAKD 115 Query: 69 PEKDIYLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCL 128 P+KDI L+INSPGG ++A M+IYD +Q ++ DVSTI +G AAS + +L AG KGKRF + Sbjct: 116 PKKDIKLFINSPGGSLSATMAIYDVVQLVRADVSTIALGIAASTASIILGAGTKGKRFAM 175 Query: 129 PNSRVMIHQPLGGYQGQATDIEIHAREILKVKGRMNELMALHTGQSLEQIERDTERDRFL 188 PN+R+MIHQPLGG GQA D+EI A+E++ K + ++A T +S EQ+ +D +RDR++ Sbjct: 176 PNTRIMIHQPLGGASGQAIDVEIQAKEVMHNKNNVTSIIAGCTSRSFEQVLKDIDRDRYM 235 Query: 189 SAPEAVEYGLVDSILT 204 S EAVEYGL+D ++ Sbjct: 236 SPIEAVEYGLIDGVID 251 >UniRef50_Q82CA5 ATP-dependent Clp protease proteolytic subunit 4 n=57 Tax=Actinobacteridae RepID=CLPP4_STRAW Length = 226 Score = 231 bits (589), Expect = 1e-59, Method: Composition-based stats. Identities = 101/206 (49%), Positives = 148/206 (71%), Gaps = 4/206 (1%) Query: 3 YSGERDNFAPHMALVPMVIEQTSRGERSFDIYSRLLKERVIFLTGQVEDHMANLIVAQML 62 Y+G R A ++P +E+TS+G R +D Y++L +ERVIFL Q++D AN ++AQ+L Sbjct: 17 YTGAR---AESRYVIPRFVERTSQGVREYDPYAKLFEERVIFLGVQIDDASANDVMAQLL 73 Query: 63 FLEAENPEKDIYLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAK 122 LE+ +P++DI +YINSPGG TA +IYDTMQF+KPD+ T+CMGQAAS A LL AG Sbjct: 74 CLESMDPDRDISVYINSPGGSFTALTAIYDTMQFVKPDIQTVCMGQAASAAAILLAAGTP 133 Query: 123 GKRFCLPNSRVMIHQPLGGY-QGQATDIEIHAREILKVKGRMNELMALHTGQSLEQIERD 181 GKR LPN+RV+IHQP +GQ +D+EI A EIL+++ ++ +++A H+ +E+I D Sbjct: 134 GKRMALPNARVLIHQPYSETGRGQVSDLEIAANEILRMRSQLEDMLAKHSTTPIEKIRED 193 Query: 182 TERDRFLSAPEAVEYGLVDSILTHRN 207 ERD+ L+A +A+ YGL+D I++ R Sbjct: 194 IERDKILTAEDALAYGLIDQIISTRK 219 >UniRef50_Q9SAA2 ATP-dependent Clp protease proteolytic subunit 6, chloroplastic n=9 Tax=Embryophyta RepID=CLPP6_ARATH Length = 271 Score = 230 bits (587), Expect = 2e-59, Method: Composition-based stats. Identities = 78/204 (38%), Positives = 121/204 (59%), Gaps = 6/204 (2%) Query: 8 DNFAPHMALV------PMVIEQTSRGERSFDIYSRLLKERVIFLTGQVEDHMANLIVAQM 61 DN AP ++ P V+ D+ S L + R+IF+ + +A +++Q+ Sbjct: 66 DNKAPRFGVIEAKKGNPPVMPSVMTPGGPLDLSSVLFRNRIIFIGQPINAQVAQRVISQL 125 Query: 62 LFLEAENPEKDIYLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGA 121 + L + + + DI +Y+N PGG + ++IYD M +IKP V T+ G AAS GA LL G Sbjct: 126 VTLASIDDKSDILMYLNCPGGSTYSVLAIYDCMSWIKPKVGTVAFGVAASQGALLLAGGE 185 Query: 122 KGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREILKVKGRMNELMALHTGQSLEQIERD 181 KG R+ +PN+RVMIHQP G G D+ E ++ + +++ + A TGQ LE++++ Sbjct: 186 KGMRYAMPNTRVMIHQPQTGCGGHVEDVRRQVNEAIEARQKIDRMYAAFTGQPLEKVQQY 245 Query: 182 TERDRFLSAPEAVEYGLVDSILTH 205 TERDRFLSA EA+E+GL+D +L Sbjct: 246 TERDRFLSASEALEFGLIDGLLET 269 >UniRef50_C7QFY1 ATP-dependent Clp protease proteolytic subunit n=3 Tax=Actinomycetales RepID=C7QFY1_CATAD Length = 201 Score = 230 bits (586), Expect = 3e-59, Method: Composition-based stats. Identities = 86/200 (43%), Positives = 129/200 (64%) Query: 7 RDNFAPHMALVPMVIEQTSRGERSFDIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEA 66 + A +P V Q GER DIYS LL ER+I+L ++ +AN ++AQ+L LE+ Sbjct: 1 MNTAATMNYTIPYVTTQRPGGERVTDIYSHLLTERIIYLGTAIDAGVANALIAQLLHLES 60 Query: 67 ENPEKDIYLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRF 126 + P+++I LY+N GG +T+ ++IYDTMQ IK + T C+GQA ++GA LL AG G R Sbjct: 61 DGPDREISLYVNCEGGDLTSMLAIYDTMQHIKAPIRTTCVGQAIAVGAVLLAAGTPGLRS 120 Query: 127 CLPNSRVMIHQPLGGYQGQATDIEIHAREILKVKGRMNELMALHTGQSLEQIERDTERDR 186 LP++RV++HQP QG D+ I A E+++++ + ++ HTGQ+ E++ DT+RDR Sbjct: 121 VLPHARVVLHQPAARGQGAIPDLIIQADELVRMRSELEAILTQHTGQTAERLRHDTDRDR 180 Query: 187 FLSAPEAVEYGLVDSILTHR 206 +A AVEYGL D +L R Sbjct: 181 VFTAAAAVEYGLADQVLGPR 200 >UniRef50_C4R657 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Pichia pastoris GS115 RepID=C4R657_PICPG Length = 226 Score = 229 bits (585), Expect = 4e-59, Method: Composition-based stats. Identities = 85/186 (45%), Positives = 125/186 (67%), Gaps = 4/186 (2%) Query: 25 SRGERSFDIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVI 84 S + D++++LL ER+I+L G ++D A I AQ+L+LE+++ K I +YINSPGG + Sbjct: 35 SNSPPAGDLFTKLLNERIIYLAGGIDDAQATSITAQLLYLESQSTSKQINIYINSPGGSV 94 Query: 85 TAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLG--GY 142 TAG++IYDT+Q+I+ VST+C+GQA SM + LL +G GKR LPN+ +M+HQP G Sbjct: 95 TAGLAIYDTIQYIRAPVSTVCLGQACSMASLLLASGTHGKRLILPNATIMVHQPSSANGI 154 Query: 143 QGQATDIEIHAREILKVKGRMNELMALHTG--QSLEQIERDTERDRFLSAPEAVEYGLVD 200 +GQATDIEI+AR I+ K ++ L H ++++I ERDRF+ EAV GL D Sbjct: 155 KGQATDIEIYARHIINTKQKLQTLYLKHMSPTMTVDEITALLERDRFMEPEEAVSLGLAD 214 Query: 201 SILTHR 206 +L + Sbjct: 215 RVLERK 220 >UniRef50_Q8LB10 ATP-dependent Clp protease proteolytic subunit-related protein 4, chloroplastic n=12 Tax=Viridiplantae RepID=CLPR4_ARATH Length = 305 Score = 227 bits (580), Expect = 1e-58, Method: Composition-based stats. Identities = 86/210 (40%), Positives = 127/210 (60%), Gaps = 11/210 (5%) Query: 7 RDNFAPHMALVPMVI---EQTSRGERSFDIYSRLLKERVIFLTGQVEDHMANLIVAQMLF 63 + P +V MVI + ++ + D+ S L K R+++L + + LI+A+ L+ Sbjct: 77 FSSSKPKRGVVTMVIPFSKGSAHEQPPPDLASYLFKNRIVYLGMSLVPSVTELILAEFLY 136 Query: 64 LEAENPEKDIYLYINSPG--------GVITAGMSIYDTMQFIKPDVSTICMGQAASMGAF 115 L+ E+ EK IYLYINS G G T +IYD M ++KP + T+C+G A A Sbjct: 137 LQYEDEEKPIYLYINSTGTTKNGEKLGYDTEAFAIYDVMGYVKPPIFTLCVGNAWGEAAL 196 Query: 116 LLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREILKVKGRMNELMALHTGQSL 175 LLTAGAKG R LP+S +MI QP+ +QGQATD+EI +EI +K M +L + H G+S Sbjct: 197 LLTAGAKGNRSALPSSTIMIKQPIARFQGQATDVEIARKEIKHIKTEMVKLYSKHIGKSP 256 Query: 176 EQIERDTERDRFLSAPEAVEYGLVDSILTH 205 EQIE D +R ++ S EAVEYG++D ++ + Sbjct: 257 EQIEADMKRPKYFSPTEAVEYGIIDKVVYN 286 >UniRef50_P56772 ATP-dependent Clp protease proteolytic subunit 1 n=184 Tax=Streptophytina RepID=CLPP1_ARATH Length = 196 Score = 226 bits (576), Expect = 5e-58, Method: Composition-based stats. Identities = 82/189 (43%), Positives = 121/189 (64%), Gaps = 3/189 (1%) Query: 17 VPMVIEQTSRGER--SFDIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIY 74 VP V ++ DIY+RL +ER+ FL +V+ ++N +++ M++L E KD+Y Sbjct: 5 VPKVPFRSPGEGDTSWVDIYNRLYRERLFFLGQEVDTEISNQLISLMIYLSIEKDTKDLY 64 Query: 75 LYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVM 134 L+INSPGG + +GM+IYDTMQF++PDV TICMG AAS+ +F+L GA KR P++RVM Sbjct: 65 LFINSPGGWVISGMAIYDTMQFVRPDVQTICMGLAASIASFILVGGAITKRIAFPHARVM 124 Query: 135 IHQPLGGYQ-GQATDIEIHAREILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEA 193 IHQP + Q + + A E+LK++ + + TG+ + I D ERD F+SA EA Sbjct: 125 IHQPASSFYEAQTGEFILEAEELLKLRETITRVYVQRTGKPIWVISEDMERDVFMSATEA 184 Query: 194 VEYGLVDSI 202 YG+VD + Sbjct: 185 QAYGIVDLV 193 >UniRef50_D2Q440 Endopeptidase Clp n=5 Tax=Actinomycetales RepID=D2Q440_9ACTO Length = 211 Score = 222 bits (566), Expect = 6e-57, Method: Composition-based stats. Identities = 88/194 (45%), Positives = 136/194 (70%) Query: 13 HMALVPMVIEQTSRGERSFDIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKD 72 +P VI Q+ RGER D+YS LL ER+I+L ++ +AN ++AQ+L LEA+ P++D Sbjct: 2 SSYTIPNVITQSPRGERIMDVYSHLLSERIIYLGTGIDAGVANALIAQLLHLEADKPDQD 61 Query: 73 IYLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSR 132 I LYIN GG +TA ++IYDT+Q+I+ VST+C+GQA + GA LL AG G+R LP++R Sbjct: 62 INLYINCEGGDMTAMLAIYDTIQYIRSPVSTLCVGQAIAAGAVLLAAGEPGRRAVLPHAR 121 Query: 133 VMIHQPLGGYQGQATDIEIHAREILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPE 192 +++HQP QG D+ + A E+++V+ ++ +++ HTGQ++EQ+ DT+RD L+A Sbjct: 122 IVLHQPAARGQGTIPDLILQADEVVRVRAQVESILSAHTGQTIEQLRHDTDRDHVLTAEG 181 Query: 193 AVEYGLVDSILTHR 206 A YG+VD ++ HR Sbjct: 182 ARAYGIVDEVIQHR 195 >UniRef50_C1E717 ATP-dependent Clp protease proteolytic subunit n=4 Tax=Viridiplantae RepID=C1E717_9CHLO Length = 279 Score = 222 bits (566), Expect = 7e-57, Method: Composition-based stats. Identities = 81/209 (38%), Positives = 127/209 (60%), Gaps = 3/209 (1%) Query: 2 SYSGERDNFAPHMALVPMVIEQTSRG--ERSFDIYSRLLKERVIFLTGQVEDHMANLIVA 59 S G R VP V +T + DI++ L +ER++++ +++ + N +VA Sbjct: 68 SGKGARSVATMMPIGVPRVPYKTPNENSWQWVDIWNCLYRERIVWVGQTIDEELGNQLVA 127 Query: 60 QMLFLEA-ENPEKDIYLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLT 118 ML+L++ E KDIYLYIN+ GG + M+I DTM +IK DV + G A +MG LL Sbjct: 128 TMLYLDSIEKGGKDIYLYINTEGGDVVPTMAILDTMGYIKSDVGCVGFGSARAMGGMLLA 187 Query: 119 AGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREILKVKGRMNELMALHTGQSLEQI 178 GAKGKR LPN+ +M+H P G +G A+DI +E+LK++ ++N++++ TGQ E++ Sbjct: 188 NGAKGKRAALPNTCIMLHHPAGVARGSASDIHNEGKELLKIRAKINKMVSRATGQPEEKV 247 Query: 179 ERDTERDRFLSAPEAVEYGLVDSILTHRN 207 D RD L+A +A++YG+VD +L R Sbjct: 248 HEDIRRDFHLTAEQALDYGIVDKVLYKRR 276 >UniRef50_B3L4C3 ATP-dependent Clp protease proteolytic subunit n=4 Tax=Plasmodium RepID=B3L4C3_PLAKH Length = 372 Score = 221 bits (564), Expect = 1e-56, Method: Composition-based stats. Identities = 73/175 (41%), Positives = 113/175 (64%), Gaps = 1/175 (0%) Query: 32 DIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIY 91 D+ K+R+I+LT ++ + +++Q+L+L+ N + DI +YINSPGG I G++I Sbjct: 183 DLKLFFFKKRIIYLTEEINKKTTDEMISQLLYLDNINHD-DIKIYINSPGGSINEGLAIL 241 Query: 92 DTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEI 151 D +IK D+ TI G ASM + +L +G KGKR LPN R+MIHQPLG GQ DIEI Sbjct: 242 DIFNYIKSDIQTISFGLVASMASVILASGKKGKRKSLPNCRIMIHQPLGNAFGQPQDIEI 301 Query: 152 HAREILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEAVEYGLVDSILTHR 206 +EIL +K + ++ T Q+ E IE+D++RD +++A EA YG++D ++ + Sbjct: 302 QTKEILYLKKLLYNYLSTFTNQTTETIEKDSDRDHYMNALEAKRYGIIDEVIETK 356 >UniRef50_Q7NEW1 ATP-dependent Clp protease proteolytic subunit 2 n=22 Tax=Cyanobacteria RepID=CLPP2_GLOVI Length = 218 Score = 220 bits (560), Expect = 4e-56, Method: Composition-based stats. Identities = 79/169 (46%), Positives = 122/169 (72%), Gaps = 2/169 (1%) Query: 39 KERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPG--GVITAGMSIYDTMQF 96 ER+++L + D +A L++AQ+L+LE+E+ K I +YINSPG G T+ ++YDTM+ Sbjct: 35 NERIVYLGTPINDVVAELLIAQLLYLESEDNAKPIEIYINSPGVAGFETSAFAVYDTMRH 94 Query: 97 IKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREI 156 ++ + TIC+G A A L+ AG KG+R LPNSR++++QP GG +GQATDI I A+E+ Sbjct: 95 VRMPIKTICLGLAGGFSALLMAAGTKGQRMSLPNSRIILYQPYGGARGQATDINIRAQEL 154 Query: 157 LKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEAVEYGLVDSILTH 205 L K +N+L+++HTG+++EQI++DTER ++S EAV YGL+D +L Sbjct: 155 LTTKRTLNQLLSIHTGKTVEQIDKDTERLFYMSPQEAVSYGLIDKVLEP 203 >UniRef50_B8AMH6 ATP-dependent Clp protease proteolytic subunit n=4 Tax=Poaceae RepID=B8AMH6_ORYSI Length = 464 Score = 219 bits (559), Expect = 5e-56, Method: Composition-based stats. Identities = 90/157 (57%), Positives = 117/157 (74%), Gaps = 4/157 (2%) Query: 49 VEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQ 108 + D +VA L N +DI +Y+NSPGG +TAGM+I+DTM+ I+PDVST+C+G Sbjct: 300 INDQRVLDVVACALC----NLTEDIIMYVNSPGGSVTAGMAIFDTMKHIRPDVSTVCIGL 355 Query: 109 AASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREILKVKGRMNELMA 168 AASMGAFLL+AG KGKR+ LPNSR+MIHQPLGG QGQ TD+EI A E+L K +N +A Sbjct: 356 AASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGQETDLEIQANEMLHHKANLNGYLA 415 Query: 169 LHTGQSLEQIERDTERDRFLSAPEAVEYGLVDSILTH 205 HTGQ L++I DT+RD F+SA EA EYGL+D ++ + Sbjct: 416 YHTGQPLDKINVDTDRDYFMSAKEAKEYGLIDGVIMN 452 >UniRef50_Q9XJ36 ATP-dependent Clp protease proteolytic subunit-related protein 2, chloroplastic n=11 Tax=Embryophyta RepID=CLPR2_ARATH Length = 279 Score = 219 bits (558), Expect = 6e-56, Method: Composition-based stats. Identities = 70/181 (38%), Positives = 116/181 (64%) Query: 23 QTSRGERSFDIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGG 82 + + DI++ L +ERVIF+ +++ +N I+A ML+L+ + + IY+Y+N PGG Sbjct: 80 REEGTWQWVDIWNALYRERVIFIGQNIDEEFSNQILATMLYLDTLDDSRRIYMYLNGPGG 139 Query: 83 VITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGY 142 +T ++IYDTM+ +K V T C+G A ++ FLL AG KG RF +P SR+ + P G Sbjct: 140 DLTPSLAIYDTMKSLKSPVGTHCVGLAYNLAGFLLAAGEKGHRFAMPLSRIALQSPAGAA 199 Query: 143 QGQATDIEIHAREILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEAVEYGLVDSI 202 +GQA DI+ A+E+ +++ + +A +TGQ E++ +D R + +A EA+EYGL+D I Sbjct: 200 RGQADDIQNEAKELSRIRDYLFNELAKNTGQPAERVFKDLSRVKRFNAEEAIEYGLIDKI 259 Query: 203 L 203 + Sbjct: 260 V 260 >UniRef50_A7ATV1 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Babesia bovis RepID=A7ATV1_BABBO Length = 225 Score = 218 bits (556), Expect = 1e-55, Method: Composition-based stats. Identities = 87/169 (51%), Positives = 123/169 (72%) Query: 38 LKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIYDTMQFI 97 ++ R +FL+G++ D + ++ Q+ + ENP ++I YINSPGG ++AG++IYD +Q + Sbjct: 44 IRTRTLFLSGELNDEKSYRLINQIFRMNEENPNENIKFYINSPGGSVSAGLAIYDILQSL 103 Query: 98 KPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREIL 157 K V TIC+GQAASMGAFLL AGAKG R +PNSR+MIHQPLGG G+ TDI+I A EIL Sbjct: 104 KMRVETICIGQAASMGAFLLAAGAKGLRSAMPNSRIMIHQPLGGAHGEVTDIKIQANEIL 163 Query: 158 KVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEAVEYGLVDSILTHR 206 ++ +N + TG+S+EQ+E+D ERD ++ EA+EYGL+D I T R Sbjct: 164 HIRQILNAHFSHFTGKSIEQVEQDCERDYYMRPSEAMEYGLIDRICTTR 212 >UniRef50_UPI0001AF02E3 ATP-dependent Clp protease n=1 Tax=Streptomyces ghanaensis ATCC 14672 RepID=UPI0001AF02E3 Length = 211 Score = 218 bits (555), Expect = 1e-55, Method: Composition-based stats. Identities = 79/196 (40%), Positives = 126/196 (64%), Gaps = 2/196 (1%) Query: 14 MALVPMVIEQTSRGERSFDIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDI 73 ++P + E+T+ G R+ D Y++LL+ER++ L +++ AN ++AQ L+LE P++DI Sbjct: 7 RHVLPELTERTASGHRTTDPYAKLLQERIVLLGTPIDETSANDVMAQFLYLEHRAPDRDI 66 Query: 74 YLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRV 133 LY+NSPGG A +IYDT++F+ DV T+C+G+A A LL AG GKR LP +R+ Sbjct: 67 SLYVNSPGGSFHAMSTIYDTLRFVSCDVETVCLGRAEGTAALLLAAGTPGKRCVLPGARL 126 Query: 134 MIHQ--PLGGYQGQATDIEIHAREILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAP 191 ++ Q P G +G+A+D+ A E+ +++ RM +++ H G++ EQ D ERD L A Sbjct: 127 VLRQPDPSGPLEGRASDLAARAEELGRIRSRMEDMLVRHAGRTPEQARADLERDTVLDAR 186 Query: 192 EAVEYGLVDSILTHRN 207 AV++GL D I+ R Sbjct: 187 AAVDHGLADRIVPDRR 202 >UniRef50_Q72R01 ATP-dependent Clp protease proteolytic subunit 2 n=9 Tax=Bacteria RepID=CLPP2_LEPIC Length = 197 Score = 217 bits (554), Expect = 2e-55, Method: Composition-based stats. Identities = 86/198 (43%), Positives = 126/198 (63%), Gaps = 6/198 (3%) Query: 12 PHMALVPMVIEQTSRGERSFDIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEK 71 P + V E+ + + I L R IFL G V D + +V ++L+LE ++P K Sbjct: 2 PETEKIAEVFEELTGSK----ISKNFLDHRKIFLWGPVTDESSKDLVGKLLYLEMKDPGK 57 Query: 72 DIYLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNS 131 I YINSPGGV+T+GM+++DT++ I V T+CMG AASMG+ LL AG KG+R PN Sbjct: 58 KITFYINSPGGVVTSGMTVFDTIKMISSPVHTVCMGMAASMGSVLLAAGTKGERSIWPNG 117 Query: 132 RVMIHQPLGG--YQGQATDIEIHAREILKVKGRMNELMALHTGQSLEQIERDTERDRFLS 189 +VMIHQP G ATD++IHA EILK K ++N+++A G + ++E DT+RD ++ Sbjct: 118 KVMIHQPSIGGQIVAPATDLKIHAEEILKTKTKLNQILADACGHPISKLEEDTDRDYYMD 177 Query: 190 APEAVEYGLVDSILTHRN 207 A EA++YG+VD + T + Sbjct: 178 AEEAIKYGIVDKLATKID 195 >UniRef50_C1FE28 ATP-dependent Clp protease proteolytic subunit (Fragment) n=1 Tax=Micromonas sp. RCC299 RepID=C1FE28_9CHLO Length = 289 Score = 217 bits (553), Expect = 2e-55, Method: Composition-based stats. Identities = 69/204 (33%), Positives = 120/204 (58%), Gaps = 8/204 (3%) Query: 7 RDNFAPHMALVPMVIEQTSRGERSFDIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEA 66 + N H++ V ++ + + D+ S + KER+++L + + LI+A++L+L+ Sbjct: 15 KSNRVLHISAVIPSLQGDASTQAPPDLPSFIFKERIVYLGMTLVPSVTELILAELLYLQY 74 Query: 67 ENPEKDIYLYINSPG--------GVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLT 118 E+ K IYLYINS G G T +IYDT++++ V T+ +G A A LL Sbjct: 75 EDKTKPIYLYINSTGTSKEGQKYGYDTEAFAIYDTIKYVNSPVHTVAVGTAWGEAAMLLA 134 Query: 119 AGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREILKVKGRMNELMALHTGQSLEQI 178 +G KG R LP++ +MI QP+ ++GQATD+EI +E+ K + EL++ + +E++ Sbjct: 135 SGEKGNRAALPSASIMIKQPIDAFRGQATDLEIQRKEMRNTKKQTLELLSKGINKPIEEL 194 Query: 179 ERDTERDRFLSAPEAVEYGLVDSI 202 E+D R ++ + EAV+YGL+D + Sbjct: 195 EKDINRPKYFNPWEAVDYGLIDKL 218 >UniRef50_C7JE62 ATP-dependent Clp protease proteolytic subunit n=9 Tax=Proteobacteria RepID=C7JE62_ACEP3 Length = 226 Score = 216 bits (551), Expect = 3e-55, Method: Composition-based stats. Identities = 75/196 (38%), Positives = 127/196 (64%), Gaps = 3/196 (1%) Query: 12 PHMALVPMVIEQTSRGERSFDIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEK 71 P P E+ + G ++ +L K+R + + G ++D +A + ++L L E+ ++ Sbjct: 27 PETPAAPEKAEEKTAGAPHGELEHKLFKQRKVLIFGGIDDKIARDVTGRLLALAGES-DQ 85 Query: 72 DIYLYINSPGGVITAGMSIYDTMQFIK--PDVSTICMGQAASMGAFLLTAGAKGKRFCLP 129 I +Y+NSPGG + +G +I+D ++F+ ++ I G AS GA + AG K +RFCLP Sbjct: 86 PIDVYVNSPGGHVESGDTIHDMIRFVDSIAPINMIGTGWVASAGALIFAAGHKDRRFCLP 145 Query: 130 NSRVMIHQPLGGYQGQATDIEIHAREILKVKGRMNELMALHTGQSLEQIERDTERDRFLS 189 N+R ++HQP+GG +G ATDI+I AREI+K++ R+N + A TG S E++ +DT+R+ ++S Sbjct: 146 NTRFLLHQPMGGVRGPATDIDIEAREIIKMRERLNRIFAKETGHSYEKVAKDTDRNYWMS 205 Query: 190 APEAVEYGLVDSILTH 205 A EA++YGLV I++ Sbjct: 206 AKEAIDYGLVTKIISK 221 >UniRef50_C5C3N3 ATP-dependent Clp protease proteolytic subunit n=3 Tax=Actinomycetales RepID=C5C3N3_BEUC1 Length = 197 Score = 216 bits (550), Expect = 4e-55, Method: Composition-based stats. Identities = 87/194 (44%), Positives = 138/194 (71%) Query: 13 HMALVPMVIEQTSRGERSFDIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKD 72 +P V+E+ ER+ D++SRLL +R+++L +++ +AN+++AQ++ LE++NP+ Sbjct: 2 SSYTIPYVVEKRPGSERAMDVFSRLLSDRIVYLGTAIDEGVANVLIAQLIHLESDNPDLP 61 Query: 73 IYLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSR 132 I+LYINSPGG I A +S+YD MQ+++P V+T C+GQAA+ A LL GAKG+R L + R Sbjct: 62 IHLYINSPGGDIPATLSVYDAMQYVRPPVATTCLGQAATTAALLLAGGAKGQRSILSHGR 121 Query: 133 VMIHQPLGGYQGQATDIEIHAREILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPE 192 V++HQP G +G D+ + A EI++V+ ++ E+++ HTGQS+E + RDT+R+ L A Sbjct: 122 VVLHQPTGQGRGTVPDLILAADEIVRVRSQLEEVLSAHTGQSVETLRRDTDRELILDAER 181 Query: 193 AVEYGLVDSILTHR 206 A YG+VD ILT R Sbjct: 182 AKAYGVVDHILTER 195 >UniRef50_C1N254 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Micromonas pusilla CCMP1545 RepID=C1N254_9CHLO Length = 195 Score = 215 bits (548), Expect = 9e-55, Method: Composition-based stats. Identities = 79/168 (47%), Positives = 116/168 (69%) Query: 38 LKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIYDTMQFI 97 + +R IFL G+V+D A+ +V +MLFL+A +PE I LY+NS GGV+T+G++IYD MQ + Sbjct: 1 MGQRRIFLNGRVDDKSAHSLVGKMLFLDAVDPETPIVLYVNSGGGVVTSGLAIYDVMQHV 60 Query: 98 KPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREIL 157 +P V T+C+G A SM A LL AG KG R+ LPN+RVM+HQP GQ TDI I A + Sbjct: 61 RPPVYTVCIGHAESMAAVLLCAGEKGHRYVLPNARVMVHQPHHVISGQTTDILIKATKAE 120 Query: 158 KVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEAVEYGLVDSILTH 205 + + +++A H+G+S ++ ERD +++A EAV +GL D ++TH Sbjct: 121 HTRTTLRDIIAKHSGRSAGEVIGVLERDTYMTAAEAVTFGLADEVITH 168 >UniRef50_Q36863 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Cyanophora paradoxa RepID=CLPP1_CYAPA Length = 194 Score = 213 bits (544), Expect = 2e-54, Method: Composition-based stats. Identities = 91/194 (46%), Positives = 128/194 (65%), Gaps = 3/194 (1%) Query: 17 VPMVIEQTSRGERS---FDIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDI 73 + ++I+Q + E + S+LL+ R+I + V+D + N IV Q+L+LE E+ KDI Sbjct: 1 MTILIQQYTNDENKKLELNNISKLLQNRIILFSQTVDDEICNSIVGQLLYLENEDSTKDI 60 Query: 74 YLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRV 133 L+INSPGG +TAG+S+YDT+Q + DVSTIC G AASMGA LL AG + KRF +SR+ Sbjct: 61 RLFINSPGGSVTAGLSVYDTIQNLSVDVSTICFGLAASMGAVLLAAGVENKRFAFASSRI 120 Query: 134 MIHQPLGGYQGQATDIEIHAREILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEA 193 MIHQPL + + ++I R K +N +++ HT Q L+QIE DTERD FLSA EA Sbjct: 121 MIHQPLSKVEAPWSHLDIQIRNGAYFKNLLNNILSFHTKQELKQIETDTERDFFLSATEA 180 Query: 194 VEYGLVDSILTHRN 207 +YG++D I + N Sbjct: 181 KQYGIIDHIFINNN 194 >UniRef50_P36387 ATP-dependent Clp protease proteolytic subunit n=4 Tax=Pinus RepID=CLPP_PINCO Length = 205 Score = 213 bits (543), Expect = 3e-54, Method: Composition-based stats. Identities = 81/191 (42%), Positives = 115/191 (60%), Gaps = 3/191 (1%) Query: 17 VPMVIEQTSRGE--RSFDIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIY 74 VP V + E D+Y+RL +ER++FL + + +AN ++ M++L AE+ K+I+ Sbjct: 5 VPKVPFRAPGDEDATWVDLYNRLYRERLLFLAQDINNEIANQLMGLMVYLSAEDANKEIF 64 Query: 75 LYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVM 134 +IN PGG + G+ +Y MQ I PDV+TICMG AASMG+F+L G KR LP++RVM Sbjct: 65 SFINCPGGSVIPGVGLYRMMQAIVPDVNTICMGVAASMGSFILIGGEMPKRIALPHARVM 124 Query: 135 IHQPLGGYQ-GQATDIEIHAREILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEA 193 IHQP Y G A D ++ + V+ + E TGQ E I+RD RD F+SA EA Sbjct: 125 IHQPASSYYDGSAADFHNESKHVTLVREYITECYIERTGQPEEVIQRDLNRDVFMSATEA 184 Query: 194 VEYGLVDSILT 204 YG+VD + Sbjct: 185 QAYGIVDVVAE 195 >UniRef50_B1X4K7 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Paulinella chromatophora RepID=B1X4K7_PAUCH Length = 225 Score = 212 bits (540), Expect = 6e-54, Method: Composition-based stats. Identities = 89/207 (42%), Positives = 134/207 (64%), Gaps = 10/207 (4%) Query: 1 MSYSGERDNFAPHMALVPMVIEQTSRGERSFDIYS--RLLKERVIFLTGQVEDHMANLIV 58 M +N++P ++EQ R E +YS + ++R+I ++ ++ D A+ I+ Sbjct: 23 MQSLDSSNNYSP-------LLEQEYR-ESVKGLYSIPKNTEDRIILISEEMNDEDASDII 74 Query: 59 AQMLFLEAENPEKDIYLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLT 118 AQ+L LEAENP++DI +YIN GG + + IYDTMQ IKPDV T+C G A M FLL+ Sbjct: 75 AQLLMLEAENPDEDIQVYINCMGGSMYGFVGIYDTMQAIKPDVVTLCYGSAFEMSGFLLS 134 Query: 119 AGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREILKVKGRMNELMALHTGQSLEQI 178 GAKGKR LPN+R+M++QP + G TD++++ +E++ ++ + L+A HTGQ E++ Sbjct: 135 GGAKGKRLALPNARIMLNQPETSFYGCITDLQLYNKELMLMRKNICSLIAAHTGQRFEKV 194 Query: 179 ERDTERDRFLSAPEAVEYGLVDSILTH 205 DT RD+F SA EA+EYGL+D IL Sbjct: 195 TADTNRDQFFSAAEAIEYGLIDRILNK 221 >UniRef50_O97252 ATP-dependent Clp protease proteolytic subunit n=2 Tax=Plasmodium RepID=O97252_PLAF7 Length = 370 Score = 212 bits (540), Expect = 7e-54, Method: Composition-based stats. Identities = 73/175 (41%), Positives = 114/175 (65%), Gaps = 1/175 (0%) Query: 32 DIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIY 91 D+ K+R+I+LT ++ A+ +++Q+L+L+ N DI +YINSPGG I G++I Sbjct: 186 DVKLFFFKKRIIYLTDEINKKTADELISQLLYLDNINHN-DIKIYINSPGGSINEGLAIL 244 Query: 92 DTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEI 151 D +IK D+ TI G ASM + +L +G KGKR LPN R+MIHQPLG G DIEI Sbjct: 245 DIFNYIKSDIQTISFGLVASMASVILASGKKGKRKSLPNCRIMIHQPLGNAFGHPQDIEI 304 Query: 152 HAREILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEAVEYGLVDSILTHR 206 +EIL +K + ++ T Q++E IE+D++RD +++A EA +YG++D ++ + Sbjct: 305 QTKEILYLKKLLYHYLSSFTNQTVETIEKDSDRDYYMNALEAKQYGIIDEVIETK 359 >UniRef50_C9RRI3 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Fibrobacter succinogenes subsp. succinogenes S85 RepID=C9RRI3_FIBSS Length = 193 Score = 211 bits (539), Expect = 1e-53, Method: Composition-based stats. Identities = 93/168 (55%), Positives = 123/168 (73%), Gaps = 3/168 (1%) Query: 37 LLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIYDTMQF 96 L +R IFL G V+D A IV Q+L+L++ N E DI +INSPGGVI++G++IYD M Sbjct: 23 LASKRRIFLWGGVDDESAERIVKQLLYLDSLNHE-DIIFFINSPGGVISSGLAIYDCMNA 81 Query: 97 IKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPL--GGYQGQATDIEIHAR 154 I+ DV T+C GQAASMGA LLTAGAKGKR PN+R+MIHQPL G A+DI+I A Sbjct: 82 IQSDVVTVCCGQAASMGAVLLTAGAKGKRCAWPNARIMIHQPLIHGEIVAPASDIQIQAE 141 Query: 155 EILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEAVEYGLVDSI 202 E+L+++G +++A +G ++EQI+RDTERD F+SA EA YGLVD + Sbjct: 142 EMLRIRGITGKILAETSGHTIEQIDRDTERDNFMSAEEARNYGLVDKV 189 >UniRef50_A6DMN5 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Lentisphaera araneosa HTCC2155 RepID=A6DMN5_9BACT Length = 196 Score = 211 bits (538), Expect = 1e-53, Method: Composition-based stats. Identities = 67/184 (36%), Positives = 109/184 (59%) Query: 22 EQTSRGERSFDIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPG 81 E+ + + + +L R I + ++ ++ +++Q++ L + ++ IY+YINS G Sbjct: 8 EEKKKEQDPGGMMKEMLDTRTIIIAEEISPELSRRVLSQLILLNKRSEKEPIYVYINSGG 67 Query: 82 GVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGG 141 G +G +IYD +QF K V T+C G AS + A KGK F LPNSR M+HQP G Sbjct: 68 GCADSGFTIYDMLQFFKAPVFTVCSGMCASAAILIFLAAKKGKNFSLPNSRFMLHQPSTG 127 Query: 142 YQGQATDIEIHAREILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEAVEYGLVDS 201 +G A+DIEI A EI K + R N+++A + LE++ +D +RD ++S EA +YG+V Sbjct: 128 VRGTASDIEITAEEINKTRVRYNQIVADVCNKPLEEVSKDADRDFWMSPAEAKKYGMVSK 187 Query: 202 ILTH 205 ++T Sbjct: 188 VITS 191 >UniRef50_B4WHH0 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Synechococcus sp. PCC 7335 RepID=B4WHH0_9SYNE Length = 230 Score = 210 bits (536), Expect = 2e-53, Method: Composition-based stats. Identities = 79/196 (40%), Positives = 122/196 (62%), Gaps = 19/196 (9%) Query: 29 RSFDIYSRLLKERVIFLTGQVED----------HMANLIVAQMLFLEAENPEKDIYLYIN 78 D+ S LLKER+++L + + LI+AQ+L+LE ++PEK IY YIN Sbjct: 22 PPPDLQSLLLKERIVYLGTPLVSSDDFKRQMGVDVTKLIIAQLLYLEFDDPEKPIYFYIN 81 Query: 79 SPG---------GVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLP 129 S G G T +I DT+++IKP V TIC+GQA A +L++GAKG R LP Sbjct: 82 STGTSWYTGDAVGFETEAFAICDTLKYIKPPVHTICLGQAMGTAAMILSSGAKGSRASLP 141 Query: 130 NSRVMIHQPLGGYQGQATDIEIHAREILKVKGRMNELMALHTGQSLEQIERDTERDRFLS 189 ++ ++++Q G QGQATDI+I A E+L K ++++ +TGQS E++++DT+R +L+ Sbjct: 142 HATIVLNQTRSGAQGQATDIQIRAEEVLANKAAQLDILSANTGQSTEKLDKDTDRMFYLT 201 Query: 190 APEAVEYGLVDSILTH 205 EA +YGL+D +L+ Sbjct: 202 PEEAKDYGLIDRVLSS 217 >UniRef50_Q2K5Q0 ATP-dependent Clp protease proteolytic subunit 3 n=43 Tax=Bacteria RepID=CLPP3_RHIEC Length = 194 Score = 210 bits (535), Expect = 2e-53, Method: Composition-based stats. Identities = 81/172 (47%), Positives = 119/172 (69%), Gaps = 1/172 (0%) Query: 35 SRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIYDTM 94 + L K R IF+ G + +A + +Q++ L A + ++DI +Y+NSPGG + +G SI+D + Sbjct: 21 ANLFKSRSIFIYGPINQELAQKVCSQLVALAAAS-DEDIRIYVNSPGGHVESGDSIHDMV 79 Query: 95 QFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAR 154 +FIKP V I G AS GA + A + +R CLPN+R ++HQP GG +G A+DIEI AR Sbjct: 80 KFIKPKVWMIGTGWVASAGALIYVAAPRERRLCLPNTRFLLHQPSGGTRGMASDIEIQAR 139 Query: 155 EILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEAVEYGLVDSILTHR 206 EI+K+ R+N++MA TGQ LE+I +DT+RD +LSA EA +YGLV I+T + Sbjct: 140 EIIKMNERLNKIMAEATGQPLEKIAKDTDRDYWLSAEEAKDYGLVSRIVTSQ 191 >UniRef50_Q01F73 ATP-dependent Clp protease proteolytic subunit (Fragment) n=1 Tax=Ostreococcus tauri RepID=Q01F73_OSTTA Length = 244 Score = 210 bits (535), Expect = 3e-53, Method: Composition-based stats. Identities = 70/204 (34%), Positives = 121/204 (59%), Gaps = 11/204 (5%) Query: 11 APHMALVPMVI---EQTSRGERSFDIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAE 67 AP ++ VI + + + D+ S + +ER+++L + + LI+A++L+L+ E Sbjct: 41 APRTRIIRAVIPSLQGDAATQSPPDLPSFIFQERIVYLGMTLVPSVTELILAELLYLQYE 100 Query: 68 NPEKDIYLYINSPG--------GVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTA 119 + +K I LYINS G G + +IYDT+Q++ P V TI +G A A LL + Sbjct: 101 DKKKPIQLYINSTGSSKDGKKYGYDSEAFAIYDTIQYVSPPVHTIAVGTAWGEAAMLLAS 160 Query: 120 GAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREILKVKGRMNELMALHTGQSLEQIE 179 G+KG+R LP++ +M+ QPL ++GQA+++EI +E+ K +M +++A TG+ + IE Sbjct: 161 GSKGQRAALPSASIMLKQPLSSFRGQASELEIQRQEMRNTKKQMLDILAKTTGRDIATIE 220 Query: 180 RDTERDRFLSAPEAVEYGLVDSIL 203 D R + EA++YGL+D +L Sbjct: 221 TDINRPLYFEPSEAIKYGLIDKVL 244 >UniRef50_Q06J25 ATP-dependent Clp protease proteolytic subunit n=2 Tax=Eukaryota RepID=CLPP_BIGNA Length = 195 Score = 210 bits (535), Expect = 3e-53, Method: Composition-based stats. Identities = 82/191 (42%), Positives = 131/191 (68%), Gaps = 2/191 (1%) Query: 17 VPMVI--EQTSRGERSFDIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIY 74 +P V+ E T + DIY+RL K+R+IFL ++D +N I++ +L L++E+ E+ IY Sbjct: 5 IPKVLFKESTDTTPQWVDIYTRLYKDRIIFLFQLLDDDFSNQIISMLLHLDSESKEELIY 64 Query: 75 LYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVM 134 YINS GG + +G+SIYDTM FI ++ T+C+G A+S+ + +L G + KRF LP+SRV+ Sbjct: 65 FYINSVGGSVLSGISIYDTMNFINSEIVTLCIGIASSISSLILANGKRTKRFILPHSRVL 124 Query: 135 IHQPLGGYQGQATDIEIHAREILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEAV 194 +HQP+ GQA+DI I + EIL+++ + ++ + Q++ ++ RD +RD FLS+ EA Sbjct: 125 LHQPIMQVSGQASDILIESEEILRLRRILTKIYIENIDQTISRVARDIDRDCFLSSREAK 184 Query: 195 EYGLVDSILTH 205 YG+VD ILT+ Sbjct: 185 NYGIVDYILTN 195 >UniRef50_A0LYF8 ATP-dependent Clp protease proteolytic subunit n=10 Tax=Bacteroidetes RepID=A0LYF8_GRAFK Length = 186 Score = 209 bits (533), Expect = 4e-53, Method: Composition-based stats. Identities = 81/171 (47%), Positives = 124/171 (72%), Gaps = 1/171 (0%) Query: 33 IYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIYD 92 I ++LL++R I++ G+V D A ++ ++ +L+ E + +I L+INSPGG +T G +IYD Sbjct: 15 IDNKLLEKRKIYMWGEVSDKTAKYVIDRLEYLDLEG-DGEIQLFINSPGGYVTDGFAIYD 73 Query: 93 TMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIH 152 T+ ++ VSTIC G AASMG+ LL+AG KG+RF P+++VMIHQP GG +GQA++IEI Sbjct: 74 TIMSLESPVSTICTGLAASMGSILLSAGKKGRRFIQPHAKVMIHQPSGGARGQASNIEIA 133 Query: 153 AREILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEAVEYGLVDSIL 203 A EILK K E++A + GQS++++ +D RD ++ A E++EYG+VD I Sbjct: 134 ANEILKTKHLSAEIIAENCGQSVDKVLKDFNRDYWMDAEESMEYGIVDGIF 184 >UniRef50_B0LP85 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Lychnis abyssinica RepID=B0LP85_9CARY Length = 372 Score = 208 bits (531), Expect = 8e-53, Method: Composition-based stats. Identities = 68/176 (38%), Positives = 109/176 (61%), Gaps = 1/176 (0%) Query: 28 ERSFDIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAG 87 + D+Y L +ER +FL +++ +AN + A ML+L ++P KD+ L+INSPGG + +G Sbjct: 192 DEWMDLYECLYEERYLFLGDEIKIELANKVSALMLYLSIQDPNKDMRLFINSPGGGLISG 251 Query: 88 MSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQAT 147 + ++D MQF++ DV TIC G AAS + +L G KR N+RVMIHQP + + Sbjct: 252 IVLFDMMQFVRADVCTICYGLAASTASLVLLGGELTKRSAFANARVMIHQPASAFFKDKS 311 Query: 148 DI-EIHAREILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEAVEYGLVDSI 202 + I +RE+LK++ ++ ++ T + I D ERD F+S EA+++G+VD I Sbjct: 312 RLFAIDSRELLKLREQVTQIYIQRTKKPEWLIWEDMERDTFMSPEEALDHGIVDYI 367 >UniRef50_Q9L4P4 Putative ATP-dependent Clp protease proteolytic subunit-like n=29 Tax=cellular organisms RepID=CLPR_SYNE7 Length = 228 Score = 208 bits (530), Expect = 9e-53, Method: Composition-based stats. Identities = 80/188 (42%), Positives = 115/188 (61%), Gaps = 19/188 (10%) Query: 39 KERVIFLTGQ----------VEDHMANLIVAQMLFLEAENPEKDIYLYINSPG------- 81 KER+I+L V + LI+AQ+L+LE +NPEK IY YINS G Sbjct: 31 KERIIYLGMPLFSSDDVKRQVGFDVTELIIAQLLYLEFDNPEKPIYFYINSTGTSWYTGD 90 Query: 82 --GVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPL 139 G T +I DTM++IKP V TIC+GQA A +L+ G G R LP++ ++++QP Sbjct: 91 AIGYETEAFAICDTMRYIKPPVHTICIGQAMGTAAMILSGGTPGNRASLPHATIVLNQPR 150 Query: 140 GGYQGQATDIEIHAREILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEAVEYGLV 199 G QGQA+DI+I A+E+L K M E+ A +TGQ +++ RDT+R +++ +AVEYGL+ Sbjct: 151 TGAQGQASDIQIRAKEVLANKRTMLEIFARNTGQDPDRLARDTDRMLYMTPAQAVEYGLI 210 Query: 200 DSILTHRN 207 D +L R Sbjct: 211 DRVLDSRK 218 >UniRef50_B9YN00 ATP-dependent Clp protease proteolytic subunit n=3 Tax=Nostocaceae RepID=B9YN00_ANAAZ Length = 220 Score = 207 bits (528), Expect = 2e-52, Method: Composition-based stats. Identities = 76/205 (37%), Positives = 125/205 (60%), Gaps = 15/205 (7%) Query: 17 VPMVIEQTSRGERSFDIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLY 76 VP I + + I R+ +ER++FL + +AN +++ +L+L++E+ K IYLY Sbjct: 9 VPYNIPGS-NQWQWISIGQRMTQERILFLNQPLTTSLANSLISSILYLDSEDQSKPIYLY 67 Query: 77 INSPGG--------------VITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAK 122 INS G I + ++IYDTMQ+IK +V TIC GQA M A +L++GAK Sbjct: 68 INSLGDPVLAGRIDETAGMMSIKSCLAIYDTMQYIKSEVVTICFGQAVGMAALILSSGAK 127 Query: 123 GKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREILKVKGRMNELMALHTGQSLEQIERDT 182 GKR LP++ + + Q QGQATDI+++A E+L+ + + ++ + +TGQ ++I +D+ Sbjct: 128 GKRVSLPHASIALTQFQVAAQGQATDIQVNAEEVLRKRAIILDIFSQNTGQPADKITKDS 187 Query: 183 ERDRFLSAPEAVEYGLVDSILTHRN 207 ER +++ EA EYGL+D +L + Sbjct: 188 ERIFYMTPLEAKEYGLIDRVLENSK 212 >UniRef50_Q3AVC4 ATP-dependent Clp protease proteolytic subunit n=9 Tax=Cyanobacteria RepID=Q3AVC4_SYNS9 Length = 223 Score = 206 bits (524), Expect = 4e-52, Method: Composition-based stats. Identities = 79/188 (42%), Positives = 123/188 (65%), Gaps = 19/188 (10%) Query: 39 KERVIFLT----------GQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPG------- 81 KER+++L Q+ + LI+AQ+LFLE ++PEK IY YINS G Sbjct: 27 KERIVYLGLPLFSDDDAKRQMGIDVTELIIAQLLFLEFDDPEKPIYFYINSTGTSWYSGD 86 Query: 82 --GVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPL 139 G T +I DT++++KP V TIC+GQA A +L+AG KG+R LP+S +++HQP Sbjct: 87 AIGFETEAFAICDTLRYVKPPVHTICIGQAMGTAAVILSAGTKGQRAALPHSSIVLHQPR 146 Query: 140 GGYQGQATDIEIHAREILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEAVEYGLV 199 G QGQATDI+I A+E+L K M E+++ +TG+++E++ ++++R +L+ EAVE+GL+ Sbjct: 147 SGAQGQATDIQIRAKEVLHNKQAMLEILSNNTGRTVEELSKNSDRMSYLTPHEAVEFGLI 206 Query: 200 DSILTHRN 207 D +L+ R Sbjct: 207 DRVLSSRK 214 >UniRef50_Q1PYX1 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1PYX1_9BACT Length = 208 Score = 206 bits (524), Expect = 5e-52, Method: Composition-based stats. Identities = 76/176 (43%), Positives = 120/176 (68%), Gaps = 1/176 (0%) Query: 32 DIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIY 91 D+ +RLLK R I +T +V MA ++ Q+L LEA+N ++DI ++INSPGG AG ++Y Sbjct: 30 DLIARLLKTRTIIVTDEVNKKMAERVITQLLLLEADN-DEDIRVFINSPGGDADAGFAMY 88 Query: 92 DTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEI 151 D ++F+KP + IC G AS +L K R+ LP+SR++IHQP G G A+D++I Sbjct: 89 DMLRFVKPKIKAICSGVVASAAVIILLGAKKEDRYSLPSSRILIHQPSTGIHGTASDLQI 148 Query: 152 HAREILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEAVEYGLVDSILTHRN 207 A EILK + +MN ++++ TGQ + ++E DT+R+ ++SA EA +YGLV+ I++ + Sbjct: 149 EATEILKCREKMNRMISVETGQPIGKVETDTKRNFWMSAEEACQYGLVNKIISSSD 204 >UniRef50_B9F8Z4 ATP-dependent Clp protease proteolytic subunit n=12 Tax=Magnoliophyta RepID=B9F8Z4_ORYSJ Length = 278 Score = 205 bits (522), Expect = 7e-52, Method: Composition-based stats. Identities = 70/219 (31%), Positives = 121/219 (55%), Gaps = 19/219 (8%) Query: 7 RDNFAPHMALVPMVIEQTSRGERSFDIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEA 66 ++ P ++ + D+ + LL R+IF+ + +A +++Q++ L A Sbjct: 59 KNTIVASENENPPLMPAIMTPAGALDLATVLLGNRIIFIGQYINSQVAQRVISQLVTLAA 118 Query: 67 ENPEKDIYLYINSPGGVITAGMSIYDTMQF-------------------IKPDVSTICMG 107 + E DI +Y+N PGG + + ++IYD M + IKP V T+C G Sbjct: 119 VDEEADILIYLNCPGGSLYSILAIYDCMSWYILDMSICHAETVLIGFGLIKPKVGTVCFG 178 Query: 108 QAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREILKVKGRMNELM 167 AS A +L G KG R+ +PN+RVMIHQP G +G ++ E + + +++++ Sbjct: 179 VVASQAAIILAGGEKGMRYAMPNARVMIHQPQGVSEGNVEEVRRQVGETIYARDKVDKMF 238 Query: 168 ALHTGQSLEQIERDTERDRFLSAPEAVEYGLVDSILTHR 206 A TGQ+L+ +++ TERDRF+S+ EA+++GLVD++L R Sbjct: 239 AAFTGQTLDMVQQWTERDRFMSSSEAMDFGLVDALLETR 277 >UniRef50_A4W647 ATP-dependent Clp protease proteolytic subunit n=5 Tax=Bacteria RepID=A4W647_ENT38 Length = 201 Score = 205 bits (522), Expect = 8e-52, Method: Composition-based stats. Identities = 79/175 (45%), Positives = 124/175 (70%), Gaps = 1/175 (0%) Query: 33 IYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIYD 92 + +LL+ R I ++G+++ +A ++ QM+ L++ + + I LYINS GG + AG +I+D Sbjct: 23 LQQKLLESRSIIISGEIDQALAEKVITQMILLQSVSND-PIKLYINSQGGHVEAGDTIHD 81 Query: 93 TMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIH 152 ++FI+PDV I G AS G + A K R+ LPN+R MIHQPLGG +GQATDIEI Sbjct: 82 FIKFIRPDVHVIGTGWVASAGITIFLAAKKEHRYALPNTRFMIHQPLGGVRGQATDIEIE 141 Query: 153 AREILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEAVEYGLVDSILTHRN 207 AREI+++ R+N+L+A TGQ LE++++DT+R+ ++S EA++YG+V I+TH + Sbjct: 142 AREIIRMLERVNKLIADATGQPLEKVKKDTDRNFWMSPGEALDYGIVGKIITHYD 196 >UniRef50_Q6ME32 ATP-dependent Clp protease proteolytic subunit 1 n=15 Tax=Chlamydiales RepID=CLPP1_PARUW Length = 206 Score = 205 bits (521), Expect = 1e-51, Method: Composition-based stats. Identities = 69/175 (39%), Positives = 111/175 (63%), Gaps = 2/175 (1%) Query: 33 IYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIYD 92 I +L R IF++ V+ A+ I+ ++ +LE +P K I INSPGG + +G +I+D Sbjct: 25 IEHAILDSRRIFISDAVDSGSASEIIRKLWYLELTDPGKPILFVINSPGGAVDSGFAIWD 84 Query: 93 TMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQP--LGGYQGQATDIE 150 ++ I V+T+ G AASMG+ L + G+RF P+SR+MIHQP G +GQATD+E Sbjct: 85 QIKMITSPVTTLVTGLAASMGSILSLCASPGRRFATPHSRIMIHQPLLSGVIKGQATDLE 144 Query: 151 IHAREILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEAVEYGLVDSILTH 205 I A+E+LK + + E+ TG++ IE+ +RD +++A EA+E+GL+D ++ Sbjct: 145 IQAKEMLKTRNGLIEIYVQATGKNFAAIEKAIDRDTWMTAQEALEFGLLDKVINS 199 >UniRef50_A7AQC7 ATP-dependent Clp protease proteolytic subunit n=4 Tax=Piroplasmida RepID=A7AQC7_BABBO Length = 245 Score = 204 bits (519), Expect = 2e-51, Method: Composition-based stats. Identities = 73/189 (38%), Positives = 125/189 (66%), Gaps = 2/189 (1%) Query: 17 VPMVIEQTSRGER--SFDIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIY 74 VP+V + +R DI++RL +ER++F++ +++ N+I+ +L L++++ EK I Sbjct: 51 VPLVEYKIPGTQRSEFHDIHTRLYRERILFVSQSLDESYTNMIIGTLLCLDSDSNEKPIT 110 Query: 75 LYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVM 134 LYINS GG TAG+++YDT++ +K ++TI +G ++ + LL +G G R LP+SRV+ Sbjct: 111 LYINSQGGPSTAGITLYDTIKHLKSKIATINVGFCSATASLLLASGTPGMRSALPHSRVV 170 Query: 135 IHQPLGGYQGQATDIEIHAREILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEAV 194 +HQP G +G A I A+ +L +K + +L + T Q L+ I +D ER++F+SA E++ Sbjct: 171 MHQPAGTLEGSAEQIRSQAQYMLNMKRILQKLYSQVTNQPLDNIAKDLEREQFMSAEESL 230 Query: 195 EYGLVDSIL 203 +YGLVD I+ Sbjct: 231 QYGLVDRII 239 >UniRef50_Q3LWG6 ATP-dependent Clp protease proteolytic subunit n=2 Tax=Bigelowiella natans RepID=Q3LWG6_BIGNA Length = 264 Score = 202 bits (515), Expect = 5e-51, Method: Composition-based stats. Identities = 78/177 (44%), Positives = 113/177 (63%) Query: 31 FDIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSI 90 DI +F TG++ D + N ++ +LFL ++ I L INSPGG I AG+++ Sbjct: 57 LDISDFFENNNFLFCTGEINDQLVNSLINSILFLSYKDNNSSIKLCINSPGGSIMAGLAL 116 Query: 91 YDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIE 150 YD + + +TI +G AASMGAFLL +G G RF PN+R+MIHQP+GG QG A DIE Sbjct: 117 YDAIVWTNKSTNTISLGLAASMGAFLLASGTNGLRFSTPNTRIMIHQPIGGIQGNAVDIE 176 Query: 151 IHAREILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEAVEYGLVDSILTHRN 207 I +E+L + +N L++ T QSL IE DT+RD++++ EA EYG++D +L R+ Sbjct: 177 IQVKELLYHRNNINYLLSKFTDQSLSMIESDTDRDKYMTPLEAKEYGIIDRVLNCRD 233 >UniRef50_C7N490 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Slackia heliotrinireducens DSM 20476 RepID=C7N490_SLAHD Length = 197 Score = 202 bits (515), Expect = 5e-51, Method: Composition-based stats. Identities = 68/193 (35%), Positives = 117/193 (60%), Gaps = 4/193 (2%) Query: 13 HMALVPMVIEQTSRGERSFDIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKD 72 A P +I++++RG +F I ++L +R I G ++ + + Q+ +L+ E+P + Sbjct: 4 SSADTPNIIKESNRGYDTFRIVDKMLADREIACIGPIDAAQTDSLCLQLRYLQKEDPAAE 63 Query: 73 IYLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSR 132 I ++ NSPGG + +G++IYDTM+ + V T+C+G A SM A L +G +R LP+SR Sbjct: 64 ITIFFNSPGGEVQSGLAIYDTMRAVSCPVRTVCLGMAGSMAALLFISG--DQRDMLPHSR 121 Query: 133 VMIHQPL--GGYQGQATDIEIHAREILKVKGRMNELMALHTGQSLEQIERDTERDRFLSA 190 VMIH PL GG G A +++ A +++ + E++A HTG++++++ T D + A Sbjct: 122 VMIHDPLLQGGVSGSALEVKTIADNLMRTRDITAEIIAEHTGKTIDEVLETTAHDAYFEA 181 Query: 191 PEAVEYGLVDSIL 203 EAV YGL D ++ Sbjct: 182 EEAVAYGLADRVI 194 >UniRef50_Q73JM9 ATP-dependent Clp protease proteolytic subunit 2 n=4 Tax=Treponema RepID=CLPP2_TREDE Length = 200 Score = 202 bits (514), Expect = 6e-51, Method: Composition-based stats. Identities = 76/175 (43%), Positives = 118/175 (67%) Query: 33 IYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIYD 92 + + L R I L G++ ++ IV Q+L +E+ + K IY+YI+SPGG AG +I+D Sbjct: 21 LMQKFLNTRQIILAGEINKELSEKIVRQLLLMESLSATKPIYIYIDSPGGDADAGFAIFD 80 Query: 93 TMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIH 152 ++FIK V TI MG AS + +L A +K +RF +PNS +IHQPL G +G AT+IEIH Sbjct: 81 MIRFIKAPVYTIGMGLVASAASIILLAASKERRFGMPNSHYLIHQPLSGIKGVATEIEIH 140 Query: 153 AREILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEAVEYGLVDSILTHRN 207 A+E+ K++ ++N+L+A TG +++ +DT+RD +L+A E+VEYGL+ I +R Sbjct: 141 AKELEKMRVKINKLIAEETGTDEKKVAKDTDRDCWLNAKESVEYGLISKIAKNRK 195 >UniRef50_Q8UD57 ATP-dependent Clp protease proteolytic subunit 3 n=16 Tax=Proteobacteria RepID=CLPP3_AGRT5 Length = 201 Score = 200 bits (508), Expect = 4e-50, Method: Composition-based stats. Identities = 74/173 (42%), Positives = 114/173 (65%), Gaps = 1/173 (0%) Query: 35 SRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIYDTM 94 + L K R IF+ G + +A + Q++ L A + + DI +Y+NSPGG + +G SI+D + Sbjct: 28 ANLFKSRSIFIYGGITQELAQKVCTQLVALAAASDD-DIRVYVNSPGGHVESGDSIHDMI 86 Query: 95 QFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAR 154 +FIKP V I G AS GA + + K +R CLPN+R ++HQP GG +G A+DIEI AR Sbjct: 87 KFIKPKVYIIGTGWVASAGALIYVSVPKERRLCLPNTRFLLHQPSGGTRGMASDIEIQAR 146 Query: 155 EILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEAVEYGLVDSILTHRN 207 EI+K+ R+ ++ + TGQ+ E+I +D +RD +LSA +A +YGLV I+ ++ Sbjct: 147 EIIKMNQRLIKIFSKATGQTEEKIAKDIDRDYWLSADDAKDYGLVGKIVESQS 199 >UniRef50_D0L7Q6 ATP-dependent Clp protease proteolytic subunit n=4 Tax=Actinomycetales RepID=D0L7Q6_GORB4 Length = 231 Score = 200 bits (508), Expect = 4e-50, Method: Composition-based stats. Identities = 67/168 (39%), Positives = 103/168 (61%) Query: 35 SRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIYDTM 94 L +R++ L ++D + + + AQM+ L E+P DI L+INSPGG + A ++I DTM Sbjct: 43 DNLRTQRILLLDTALDDEIGSELCAQMVLLSVEDPVADIALWINSPGGSVPAMLAIMDTM 102 Query: 95 QFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAR 154 + I D+ T+ +G A S G FLL G GKRF LP+++V++HQ G G A DIE+ A Sbjct: 103 RLIPNDIRTVNLGMAYSAGQFLLCCGTAGKRFILPHAKVLLHQGSAGIGGYAPDIELQAD 162 Query: 155 EILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEAVEYGLVDSI 202 ++ V+ + ++A TGQ E++ D+ RD +A EA+ YG VD + Sbjct: 163 DLRHVRDTVLGIIAEQTGQPPERVFDDSLRDHVFTADEAIAYGFVDHL 210 >UniRef50_A8IS47 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Chlamydomonas reinhardtii RepID=A8IS47_CHLRE Length = 282 Score = 199 bits (506), Expect = 6e-50, Method: Composition-based stats. Identities = 64/192 (33%), Positives = 122/192 (63%), Gaps = 4/192 (2%) Query: 17 VPMVI--EQTSRGERSFDIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIY 74 VP V+ R D++ ++V+F+ + + +AN ++A L+L++ + +K IY Sbjct: 68 VPKVLCRPPGQRQSEWVDLWEAYTYQKVVFIKEAITEDVANNMIALTLYLDSLD-QKRIY 126 Query: 75 LYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAG-AKGKRFCLPNSRV 133 ++N PGG + +++YDTMQ+++ +T+C G MG FLLTAG KG RF +P+S + Sbjct: 127 YWLNVPGGDVVPTLALYDTMQYVRSKTATVCYGLCLGMGGFLLTAGGEKGYRFAMPHSIL 186 Query: 134 MIHQPLGGYQGQATDIEIHAREILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEA 193 M+H P G +GQA+++ I +RE+++++ ++ L + TGQ +++ R+ R++++ +A Sbjct: 187 MMHHPSGASRGQASEMHIESRELVRMRDYLSLLTSNATGQPYDRVIRELSRNKWMDPKQA 246 Query: 194 VEYGLVDSILTH 205 +EYG++D +LT Sbjct: 247 IEYGMIDKVLTT 258 >UniRef50_Q4UAC9 ATP-dependent Clp protease proteolytic subunit n=2 Tax=Theileria RepID=Q4UAC9_THEAN Length = 271 Score = 198 bits (505), Expect = 8e-50, Method: Composition-based stats. Identities = 81/212 (38%), Positives = 125/212 (58%), Gaps = 39/212 (18%) Query: 33 IYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITA------ 86 + +K R+IFL+G++ D ++ I++ +L + +P+ I YINSPGG +T+ Sbjct: 59 LDEFYIKNRIIFLSGELNDKVSFKIISSILRINENDPKLPIKFYINSPGGSVTSGNFITQ 118 Query: 87 --------GMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQP 138 G++I+D ++ +K V TI +GQAASMGAFLL +G KG R+ +PNSR+MIHQP Sbjct: 119 FLHTLFFLGLAIFDILRSLKMPVETISLGQAASMGAFLLASGTKGMRYAMPNSRIMIHQP 178 Query: 139 LG-------------------------GYQGQATDIEIHAREILKVKGRMNELMALHTGQ 173 LG G GQA+DIEI A EIL+++ +N ++ TG+ Sbjct: 179 LGTLRCSVTVLAPAAPIITNPPKGLYRGAHGQASDIEIQANEILQIREILNTNLSNFTGK 238 Query: 174 SLEQIERDTERDRFLSAPEAVEYGLVDSILTH 205 S+E+IE+D RD ++ EA++YGL+D I+ Sbjct: 239 SVEEIEKDCSRDNYMRPSEALQYGLIDHIINT 270 >UniRef50_A8INX1 ATP-dependent Clp protease proteolytic subunit n=2 Tax=Chlamydomonadales RepID=A8INX1_CHLRE Length = 283 Score = 198 bits (504), Expect = 1e-49, Method: Composition-based stats. Identities = 76/206 (36%), Positives = 115/206 (55%), Gaps = 4/206 (1%) Query: 2 SYSGERDNFAPHMALVPMVIE--QTSRGERS--FDIYSRLLKERVIFLTGQVEDHMANLI 57 S S R+ A + P+V Q GE + D+Y LL R+IF+ G + D MA I Sbjct: 42 SRSSRRNVEARGIRRSPVVTPDIQIGHGEDAIEMDLYRYLLSNRIIFIGGYINDKMATQI 101 Query: 58 VAQMLFLEAENPEKDIYLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLL 117 V ++ LEA + +DI +YINSPGG + + + D MQ IKPDV T+ +G S + ++ Sbjct: 102 VGSLMALEAVDENEDIRIYINSPGGQPYSVLGVVDAMQSIKPDVQTVALGACYSYASLVV 161 Query: 118 TAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREILKVKGRMNELMALHTGQSLEQ 177 AG KGKR+ + N+R+M+ QP+GG QG I+ E+ + + TG + +Q Sbjct: 162 AAGTKGKRYAMKNTRLMMTQPMGGSQGDIYQIKATVEELNALYQIFSRYYMKFTGMNQDQ 221 Query: 178 IERDTERDRFLSAPEAVEYGLVDSIL 203 IE+ T RD F++ +A GL+D I+ Sbjct: 222 IEQATCRDHFMTPEQAKLEGLIDEII 247 >UniRef50_Q06FP3 ATP-dependent Clp protease proteolytic subunit n=5 Tax=eudicotyledons RepID=CLPP_PELHO Length = 219 Score = 198 bits (503), Expect = 1e-49, Method: Composition-based stats. Identities = 70/196 (35%), Positives = 110/196 (56%), Gaps = 1/196 (0%) Query: 8 DNFAPHMALVPMVIEQTSRGERSFDIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAE 67 N P V ++ D+Y+RL ++R +FL +E+ +AN IV M+ L E Sbjct: 13 PNPDPEPDSVEEELDSMEEKATWVDLYNRLYRQRWLFLGKDLEEEVANNIVGLMIHLNIE 72 Query: 68 NPEKDIYLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFC 127 +P LYIN GG+I G+++YDT+ F++PDV TIC+G AASM + +L G +R Sbjct: 73 DPFWTQTLYINCLGGLIIPGLALYDTIGFVEPDVKTICLGIAASMASVVLVGGTVTERCA 132 Query: 128 LPNSRVMIHQPLGG-YQGQATDIEIHAREILKVKGRMNELMALHTGQSLEQIERDTERDR 186 PN+RVMIHQP + + +D+ + L+++ + ++ T + I D ERD Sbjct: 133 FPNARVMIHQPRAKEFDDRFSDLNLEGHLFLQLRNCVTQIYIHRTNKPAWVIIADLERDT 192 Query: 187 FLSAPEAVEYGLVDSI 202 F+SA EA YG++D + Sbjct: 193 FMSATEARTYGIIDGV 208 >UniRef50_P48254 Putative ATP-dependent Clp protease proteolytic subunit-like n=1 Tax=Cyanophora paradoxa RepID=CLPPL_CYAPA Length = 199 Score = 196 bits (500), Expect = 3e-49, Method: Composition-based stats. Identities = 76/177 (42%), Positives = 106/177 (59%), Gaps = 2/177 (1%) Query: 33 IYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIYD 92 I + LL ERVIFL + ++ + +L+LE+EN +K + YINS +YD Sbjct: 22 INNALLNERVIFLCNYEDATDESIYIGMLLYLESENSQKPVSFYINSSITFPNLCFGLYD 81 Query: 93 TMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPL--GGYQGQATDIE 150 T+ IK D+ TIC+G A M + +L AG KG+RF LPNSR+M+ +PL GG GQATD+ Sbjct: 82 TILQIKADIVTICLGLAGGMSSLILAAGTKGQRFALPNSRIMMQEPLIDGGVNGQATDLA 141 Query: 151 IHAREILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEAVEYGLVDSILTHRN 207 I A+E++ K + L TGQ IE+D +R R+ SA A EYG +DS+L N Sbjct: 142 IEAKELMDTKEILINLYHERTGQPKPVIEKDLQRPRYFSAQAAKEYGFIDSLLMASN 198 >UniRef50_D1BUV7 ATP-dependent Clp protease proteolytic subunit n=4 Tax=Actinomycetales RepID=D1BUV7_XYLCX Length = 208 Score = 196 bits (500), Expect = 3e-49, Method: Composition-based stats. Identities = 68/168 (40%), Positives = 107/168 (63%) Query: 36 RLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIYDTMQ 95 L + RV+ L G ++D L+ Q++ L E+P DI L+I+SPGG + A ++I D ++ Sbjct: 17 ELYERRVLVLDGVLDDDNGTLLATQLVTLAVEDPVADIALWIHSPGGSVPAMLAIRDLIR 76 Query: 96 FIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHARE 155 I DV+T+ +G AAS G FLL+AG +GKR LP++R+++HQ G G A DIE+ A + Sbjct: 77 TIPNDVATLALGFAASAGQFLLSAGTRGKRRALPHARILLHQGSAGIGGTAVDIELQADD 136 Query: 156 ILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEAVEYGLVDSIL 203 + ++ + L+A TGQ E++ D+ D + +A EA EYG VD+I+ Sbjct: 137 LRHMRDTVLGLIAQDTGQPPERVFEDSLHDHWFTAAEAQEYGFVDTIV 184 >UniRef50_B0LP81 ATP-dependent Clp protease proteolytic subunit n=2 Tax=Eukaryota RepID=B0LP81_9MYRT Length = 408 Score = 196 bits (498), Expect = 5e-49, Method: Composition-based stats. Identities = 73/189 (38%), Positives = 108/189 (57%), Gaps = 3/189 (1%) Query: 17 VPMVIEQTSRGER--SFDIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIY 74 VP V + E D+++ L + R +FL ++ + N I + M+FL ENP+K IY Sbjct: 5 VPRVAFRVPGDENASWVDLFNGLFRARSVFLGQELNEEGGNDIASLMIFLALENPKKSIY 64 Query: 75 LYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVM 134 ++NSPGG+ AG++I DTM F+ PDV T+ +G ASM +FLL G GKR + R M Sbjct: 65 FFLNSPGGLALAGLAISDTMDFVTPDVYTLGLGLVASMASFLLACGTPGKRRASDHMRAM 124 Query: 135 IHQPLGGYQGQAT-DIEIHAREILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEA 193 IHQP + +A + E RE+ ++ + + TGQ I+ D RD F+SA E+ Sbjct: 125 IHQPSSKFLNEAALNXEFSRRELQSIRDIVIKTYVEKTGQDARVIKEDLRRDSFMSATES 184 Query: 194 VEYGLVDSI 202 +YGLVD + Sbjct: 185 KDYGLVDDV 193 >UniRef50_A4S2U0 ATP-dependent Clp protease proteolytic subunit n=2 Tax=Mamiellales RepID=A4S2U0_OSTLU Length = 210 Score = 195 bits (496), Expect = 8e-49, Method: Composition-based stats. Identities = 57/187 (30%), Positives = 111/187 (59%), Gaps = 2/187 (1%) Query: 17 VPMVIEQTSRGERSFDIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLY 76 VP+++ G D++ L ++R++FL ++++ +A A++L LE+E+PE +I ++ Sbjct: 26 VPVMVPDGRGGGE--DVFGALARDRIVFLGTRIDEQVAAETCARLLQLESEDPEGEIRVW 83 Query: 77 INSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIH 136 +N G +I DTM+++ VST+ +G A L+ AG KGKR+ + ++R+++ Sbjct: 84 VNCVAGTQYCVTAILDTMEYVSCPVSTVALGCVAGPPVMLVAAGDKGKRYGMSSARIVLS 143 Query: 137 QPLGGYQGQATDIEIHAREILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEAVEY 196 QPLGG G + +++I A E+ + +A +TG+ +++E RD ++ EA+++ Sbjct: 144 QPLGGLAGTSIEVKIQATELNRNAKAQVGFIAKYTGRDADELEAMMARDTYMGVDEAIDF 203 Query: 197 GLVDSIL 203 GL+D L Sbjct: 204 GLIDHAL 210 >UniRef50_C5XH66 ATP-dependent Clp protease proteolytic subunit n=11 Tax=Magnoliophyta RepID=C5XH66_SORBI Length = 291 Score = 195 bits (495), Expect = 1e-48, Method: Composition-based stats. Identities = 78/202 (38%), Positives = 125/202 (61%), Gaps = 8/202 (3%) Query: 14 MALVPMVIEQTSRGERSFDIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDI 73 +A+V + T+ + D+ S L K R+++L + + L++A+ L+L+ ++ EK I Sbjct: 73 VAMVVPFLRGTAWEQPPPDLASFLYKNRIVYLGMCLVPSVTELMLAEFLYLQYDDAEKPI 132 Query: 74 YLYINSPG--------GVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKR 125 YLYINS G G T +++YD M+++K + T+C+G A A LL AGAKG R Sbjct: 133 YLYINSTGTTKNGEKLGYETEALAVYDAMRYVKVPIFTLCVGNAWGEAALLLAAGAKGNR 192 Query: 126 FCLPNSRVMIHQPLGGYQGQATDIEIHAREILKVKGRMNELMALHTGQSLEQIERDTERD 185 LP+S +MI QP+G +QGQATD++I +EI VK M +L+A H G+ +E+I RD R Sbjct: 193 AALPSSTIMIKQPIGRFQGQATDVDIARKEIRNVKIEMVKLLARHIGKPIEEIARDIRRP 252 Query: 186 RFLSAPEAVEYGLVDSILTHRN 207 ++ S EAV+YG++D ++ + Sbjct: 253 KYFSPSEAVDYGIIDKVIYNEK 274 >UniRef50_Q8L770 ATP-dependent Clp protease proteolytic subunit-related protein 3, chloroplastic n=17 Tax=Viridiplantae RepID=CLPR3_ARATH Length = 330 Score = 194 bits (494), Expect = 2e-48, Method: Composition-based stats. Identities = 67/210 (31%), Positives = 120/210 (57%), Gaps = 17/210 (8%) Query: 11 APHMALVPMVIEQT------SRGERSFDIYSRLLKERVIFLTGQVEDHMANLIVAQMLFL 64 +P + P +E++ D+ S LL R++++ + + L+VA++++L Sbjct: 94 SPQLMSSPAQVERSVAYNEHRPRTPPPDLPSMLLDGRIVYIGMPLVPAVTELVVAELMYL 153 Query: 65 EAENPEKDIYLYINSPG---------GVITAGMSIYDTMQFIKPDVSTICMGQAASMGAF 115 + +P++ IY+YINS G G+ + G +IYD++ +K +V T+C+G A Sbjct: 154 QWLDPKEPIYIYINSTGTTRDDGETVGMESEGFAIYDSLMQLKNEVHTVCVGAAIGQACL 213 Query: 116 LLTAGAKGKRFCLPNSRVMIHQPLGGYQG--QATDIEIHAREILKVKGRMNELMALHTGQ 173 LL+AG KGKRF +P+++ MI QP G A+D+ I A+E++ + + EL++ HTG Sbjct: 214 LLSAGTKGKRFMMPHAKAMIQQPRVPSSGLMPASDVLIRAKEVITNRDILVELLSKHTGN 273 Query: 174 SLEQIERDTERDRFLSAPEAVEYGLVDSIL 203 S+E + R ++ AP+A E+G++D IL Sbjct: 274 SVETVANVMRRPYYMDAPKAKEFGVIDRIL 303 >UniRef50_Q06R14 ATP-dependent Clp protease proteolytic subunit n=4 Tax=Jasminum RepID=Q06R14_9LAMI Length = 261 Score = 193 bits (492), Expect = 2e-48, Method: Composition-based stats. Identities = 70/181 (38%), Positives = 112/181 (61%), Gaps = 1/181 (0%) Query: 23 QTSRGERSFDIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGG 82 + + E D+Y++L + ++FL ++E +AN I+A ML+L ++P + +Y +INSPGG Sbjct: 48 KAEKEEVWTDLYTKLYQLGILFLGEEIEFVVANEIIAAMLYLNMQDPLQRLYFFINSPGG 107 Query: 83 VITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQP-LGG 141 + G++IYD M++I ++ TIC GQAASM + LL +GAKG R P+S VM+HQP L Sbjct: 108 AVHDGLAIYDAMKYIDQEIHTICYGQAASMASVLLASGAKGHRGAYPHSMVMMHQPALAP 167 Query: 142 YQGQATDIEIHAREILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEAVEYGLVDS 201 +G+ + + +K R+ ++ T + IER ERD ++S EA EYG++D Sbjct: 168 TRGRLQRLVRERNCLNILKERIIDIYVCETRKDRLVIERTLERDHYMSPIEAREYGIIDK 227 Query: 202 I 202 I Sbjct: 228 I 228 >UniRef50_B7FZS4 ATP-dependent Clp protease proteolytic subunit n=2 Tax=Bacillariophyta RepID=B7FZS4_PHATR Length = 309 Score = 193 bits (491), Expect = 3e-48, Method: Composition-based stats. Identities = 70/201 (34%), Positives = 123/201 (61%), Gaps = 8/201 (3%) Query: 7 RDNFAPHMALVPMVIEQTSRGERSFDIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEA 66 + +P + +P + + DI + + ++R +F++ +++ AN +++ ML+L Sbjct: 52 MPSQSPQVPYMPP----GADYAQFIDIEAAMYRDRTLFISTFIDEETANSLISIMLYLRN 107 Query: 67 ENPEKDIYLYINSPGGVITAGMSIYDTMQFI--KPDVSTICMGQAASMGAFLLTAGAKGK 124 E+P+ I +Y N PG ++ +++YD +Q K ++ T+ +G A MGAFL +AG KGK Sbjct: 108 ESPKDPISMYFNVPGALLRPSLALYDLIQQTKQKCEIETVNLGLCAGMGAFLCSAGTKGK 167 Query: 125 RFCLPNSRVMIHQPLG--GYQGQATDIEIHAREILKVKGRMNELMALHTGQSLEQIERDT 182 R +PNSR ++ + ++GQATDI + R + K RM E ++ TGQ LE+I++D Sbjct: 168 RNAMPNSRFLLQRTGMDEVFRGQATDIALEVRNVKKWNDRMEEELSQMTGQPLERIQQDL 227 Query: 183 ERDRFLSAPEAVEYGLVDSIL 203 +RD +LS+ EAV+YGL+D +L Sbjct: 228 KRDFYLSSDEAVQYGLIDRVL 248 >UniRef50_Q6C1Y5 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Yarrowia lipolytica RepID=Q6C1Y5_YARLI Length = 263 Score = 192 bits (489), Expect = 6e-48, Method: Composition-based stats. Identities = 81/242 (33%), Positives = 130/242 (53%), Gaps = 43/242 (17%) Query: 8 DNFAPHMALVPMVIEQTSRGERSF-DIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEA 66 + P + + V ++ + S DI ++LL ER++ + G ++D MA +VAQ+L+LE Sbjct: 20 SSRVPRVRQLAAVTQKRRYSDFSIHDIPAKLLNERIVHVAGPIDDSMATSVVAQLLYLEH 79 Query: 67 ENPEKDIYLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRF 126 ++ +K I++YINSPGG +TAG +I DTM +I+ V T+C+GQAASM + LLT GA G R Sbjct: 80 KSAQKPIHMYINSPGGAVTAGFAILDTMNYIRSPVHTVCLGQAASMASLLLTCGAPGNRI 139 Query: 127 CLPNSRVMIHQPLGGYQGQATDIEIHAREILKVKGRMNELM----------------ALH 170 PNS +M H+PLGG G + +E+H + +++ R+ +L A Sbjct: 140 MTPNSTIMTHEPLGGIVGSSKLVELHTFHLQRIRTRIIQLYYDSMKLGLEGRLKEEGAEE 199 Query: 171 TGQS----------------LEQIERDT----------ERDRFLSAPEAVEYGLVDSILT 204 T ++ ++ I + T D+F +A EA++ GLVD IL Sbjct: 200 THEAAEPTPLMSLLSSDRSWIDTINQKTLTHSLVDTLIGLDQFFNADEALKLGLVDRILK 259 Query: 205 HR 206 + Sbjct: 260 TK 261 >UniRef50_A9I409 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Bordetella petrii DSM 12804 RepID=A9I409_BORPD Length = 217 Score = 192 bits (489), Expect = 6e-48, Method: Composition-based stats. Identities = 65/180 (36%), Positives = 110/180 (61%), Gaps = 1/180 (0%) Query: 27 GERSFDIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITA 86 G+ S + + + R + + G + D +A+ V ++L L+AE+ + I + ++SPGG + + Sbjct: 33 GQNSAFLEEKTFRTRTVLVFGTITDAVASETVRRLLTLDAES-DAPIDMIVSSPGGHLES 91 Query: 87 GMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQA 146 G +I+D +FI V+ I G S L + +RFCLP +R +IHQP GG G A Sbjct: 92 GDAIHDVARFISAPVNMIGTGWVGSAATHLYLGAPRERRFCLPQTRFLIHQPSGGAGGPA 151 Query: 147 TDIEIHAREILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEAVEYGLVDSILTHR 206 +D+ IHA+EI++ + R+ +++A TGQ +E++ +D ERD ++SA EA+ YGL I+ R Sbjct: 152 SDMAIHAKEIIRARERIAQVIARETGQPIERVRQDIERDLWMSAEEAIAYGLASRIIERR 211 >UniRef50_O51698 ATP-dependent Clp protease proteolytic subunit 2 n=20 Tax=Borrelia RepID=CLPP2_BORBU Length = 206 Score = 192 bits (488), Expect = 6e-48, Method: Composition-based stats. Identities = 68/170 (40%), Positives = 111/170 (65%) Query: 37 LLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIYDTMQF 96 +LK R I + G++ ++ L ++L LEA + +K I++YI+S GG I AG +I++ ++F Sbjct: 28 VLKSRSIVIAGEITKDVSRLFQEKILLLEALDFKKPIFVYIDSEGGDIDAGFAIFNMIRF 87 Query: 97 IKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREI 156 +KP V T+ +G AS A + A RF LP +R ++HQPL G++G ATDIEI+ E+ Sbjct: 88 VKPKVFTVGVGLVASAAALIFLAAKLENRFSLPFARYLLHQPLSGFKGVATDIEIYTNEL 147 Query: 157 LKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEAVEYGLVDSILTHR 206 KVK +N +++ TGQ + +IE+DT+RD +L + A +YGLV ++ + Sbjct: 148 NKVKKELNNIISKETGQKISKIEKDTDRDFWLDSSAAKKYGLVFEVVETK 197 >UniRef50_B5A4F2 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Gymnochlora stellata RepID=B5A4F2_GYMST Length = 240 Score = 191 bits (485), Expect = 1e-47, Method: Composition-based stats. Identities = 72/176 (40%), Positives = 117/176 (66%) Query: 32 DIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIY 91 ++ + L K R+IF TG++ D ++N IV +++ + + + I INSPGG I++G++IY Sbjct: 34 EVDTILKKNRIIFCTGEINDLVSNTIVNHLVYFSSLSDKDAIKFIINSPGGNISSGLAIY 93 Query: 92 DTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEI 151 D + K ++T +G +AS+G FLL G+ +RF PNSR+MIHQP GG QG DIEI Sbjct: 94 DAITISKLTLNTYSIGISASIGCFLLCIGSPNRRFSFPNSRIMIHQPFGGIQGTPIDIEI 153 Query: 152 HAREILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEAVEYGLVDSILTHRN 207 +E++ + +N L+A HT S+E+IE+DT+ +++ + EA+ YG++D IL +N Sbjct: 154 QTKELIIQRSNLNYLIACHTNNSIEKIEKDTDFEKYFTPHEALRYGIIDKILIKKN 209 >UniRef50_C5CQN7 ATP-dependent Clp protease proteolytic subunit n=5 Tax=Bacteria RepID=C5CQN7_VARPS Length = 198 Score = 190 bits (483), Expect = 3e-47, Method: Composition-based stats. Identities = 68/174 (39%), Positives = 108/174 (62%) Query: 33 IYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIYD 92 + + K R + + G + D +A + +++ L+A++ +K I + ++SPGG + +G +I+D Sbjct: 20 LEEKAFKSRTLLIFGSITDSVAADVTRRLIALDADSGDKPIDILVSSPGGHLESGDAIHD 79 Query: 93 TMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIH 152 ++FI V+ I G S L A + +R CLPN+R +IHQP GG GQATDI I Sbjct: 80 IVRFISAPVNMIGTGWVGSAATHLYLAVPRERRVCLPNTRFLIHQPSGGAGGQATDIAIQ 139 Query: 153 AREILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEAVEYGLVDSILTHR 206 A+EI+K + R+ +A TG+ ++ + D ERDR+LSA EAVEYGLV I+ + Sbjct: 140 AQEIIKARHRIAHEIARETGKPIDVVLADIERDRWLSAAEAVEYGLVSRIIQRK 193 >UniRef50_Q5Z0M5 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Nocardia farcinica RepID=Q5Z0M5_NOCFA Length = 201 Score = 190 bits (483), Expect = 3e-47, Method: Composition-based stats. Identities = 71/179 (39%), Positives = 110/179 (61%), Gaps = 3/179 (1%) Query: 27 GERSFDIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITA 86 G R+ +LL R++ L G ++D L+ Q+L L AEN E I L+I+SPGG + A Sbjct: 11 GWRA---REQLLSRRILVLDGPLDDDNGTLLATQLLTLAAENDEAPISLWIHSPGGSVPA 67 Query: 87 GMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQA 146 ++I D M+ + +VST+ +G A S G FLL+AG++GKRF LP++RV++HQ G G A Sbjct: 68 MLAIRDVMRLVPCEVSTLALGLACSAGQFLLSAGSRGKRFALPHARVLMHQGSAGIGGTA 127 Query: 147 TDIEIHAREILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEAVEYGLVDSILTH 205 D+E+ A ++ + L+A TGQ ++I D+ DR+ +A +A EYG +D I+ Sbjct: 128 VDVEVQADDLRHTVETVLGLIAADTGQPYDRIYEDSLHDRWFTAAQAKEYGFIDHIVDS 186 >UniRef50_A4RSQ9 ATP-dependent Clp protease proteolytic subunit n=6 Tax=cellular organisms RepID=A4RSQ9_OSTLU Length = 308 Score = 190 bits (482), Expect = 4e-47, Method: Composition-based stats. Identities = 57/178 (32%), Positives = 105/178 (58%), Gaps = 11/178 (6%) Query: 41 RVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPG---------GVITAGMSIY 91 R++++ + + LIV+++L+L+ + +K Y+YINS G G T +I+ Sbjct: 108 RIVYIGMPLVPAVTELIVSELLYLQYTDQKKPCYIYINSTGCTRADGEVVGFETEATAIF 167 Query: 92 DTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQG--QATDI 149 DTM++I ++ T+ G A LL+AG KGKR+ P++ M+HQP G QAT++ Sbjct: 168 DTMKYIGNEIYTVGTGVAIGQACMLLSAGDKGKRYMTPHATAMLHQPRVPSTGERQATEL 227 Query: 150 EIHAREILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEAVEYGLVDSILTHRN 207 I RE L K + ++++ TG S+ ++++D +R +++A +A+EYG+VD ++ + Sbjct: 228 NIKWRETLAQKKSLLDILSQTTGHSVAKLDKDMQRPLYMTAKDAIEYGIVDKVIERES 285 >UniRef50_D1Z6F0 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Sordaria macrospora RepID=D1Z6F0_SORMA Length = 225 Score = 189 bits (480), Expect = 6e-47, Method: Composition-based stats. Identities = 80/211 (37%), Positives = 116/211 (54%), Gaps = 41/211 (19%) Query: 4 SGERDNFAPHMAL-VPMVIEQTSRGERSFDIYSRLLKERVIFLTGQVEDHMANLIVAQML 62 SG P + +P + E TS G R + L G ++D + IVAQ+L Sbjct: 29 SGSGAPLRPMGNIPMPYITEVTSGGW------------RTLCLNGAIDDTTSAAIVAQLL 76 Query: 63 FLEAENPEKDIYLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAK 122 +LE++NP+K I +YINSPGG +++G++IYDTM +IK VST+C+G AASM A LL G Sbjct: 77 WLESDNPDKPITMYINSPGGEVSSGLAIYDTMTYIKSPVSTVCVGAAASMAAVLLIGGEP 136 Query: 123 GKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREILKVKGRMNELMALHTGQS-------L 175 GKR+ LP+S VMI +++ ++N+++ H +S L Sbjct: 137 GKRYALPHSTVMIQ---------------------RIREQINKIVQSHINKSFGYEKYDL 175 Query: 176 EQIERDTERDRFLSAPEAVEYGLVDSILTHR 206 I ERD++L+A EAVE G+VD IL R Sbjct: 176 AAISDMMERDKYLTAEEAVELGVVDQILDRR 206 >UniRef50_B0LN89 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Lychnis chalcedonica RepID=B0LN89_LYCCH Length = 222 Score = 188 bits (478), Expect = 1e-46, Method: Composition-based stats. Identities = 62/175 (35%), Positives = 98/175 (56%), Gaps = 1/175 (0%) Query: 29 RSFDIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGM 88 D Y L K R++FL + N I +LFL E+ +K +L+I+S GG+ T M Sbjct: 24 DWLDFYHELHKRRLLFLCQDFNYEIVNQIAGLLLFLHLEDEDKQQHLFIHSRGGLATHAM 83 Query: 89 SIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGG-YQGQAT 147 +IYDTMQ + V TI MG ASM LL GA KR ++R+M+H P ++G A+ Sbjct: 84 AIYDTMQLVTLGVHTIGMGVVASMATLLLAGGAYTKRNAYAHTRIMLHLPATRPFKGTAS 143 Query: 148 DIEIHAREILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEAVEYGLVDSI 202 ++ ++E+L++ + E++ TG+ + I +D ++ SA EA YG++D I Sbjct: 144 EVLGESKEVLRLTQTLVEILEERTGRPQDLIYKDMQKTTHFSAEEAQAYGIIDEI 198 >UniRef50_Q9MTJ8 ATP-dependent Clp protease proteolytic subunit n=7 Tax=Oenothera RepID=CLPP_OENEH Length = 249 Score = 188 bits (478), Expect = 1e-46, Method: Composition-based stats. Identities = 66/176 (37%), Positives = 102/176 (57%), Gaps = 2/176 (1%) Query: 29 RSFDIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGM 88 D+Y+ L + R IFL + +AN I M+FL ++ +++Y +INSPGG+ AG+ Sbjct: 25 TWVDLYNVLYRTRSIFLGDAIHFEVANHIAGLMIFLTIQDATQNLYFFINSPGGLAVAGL 84 Query: 89 SIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGY--QGQA 146 IYDTMQ++ P V T+ +G ASM +FLL G KR PN RVMIHQP Y + Q+ Sbjct: 85 LIYDTMQYVTPPVYTLGLGVLASMASFLLVGGETSKRLMGPNGRVMIHQPESDYTHKDQS 144 Query: 147 TDIEIHAREILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEAVEYGLVDSI 202 ++++ + E+ ++ + + T E + ER+ F++A EA YG+VD I Sbjct: 145 LEVQLDSGEVEDIRKMVIRVYLERTRLPREVLNDHLERNYFMTATEAKYYGIVDDI 200 >UniRef50_B4WHH1 ATP-dependent Clp protease proteolytic subunit n=3 Tax=Cyanobacteria RepID=B4WHH1_9SYNE Length = 218 Score = 187 bits (476), Expect = 2e-46, Method: Composition-based stats. Identities = 82/203 (40%), Positives = 125/203 (61%), Gaps = 15/203 (7%) Query: 17 VPMVIEQTSRGERSFDIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLY 76 VP + + R + +I++R+ +ER++FL + D +AN +V+ +L+L++E+ K IYLY Sbjct: 3 VPYNLPGS-RSWQWVNIFTRMSQERILFLNSPLTDGVANSLVSALLYLDSEDQSKPIYLY 61 Query: 77 INSPGG--------------VITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAK 122 INS G I AG+++YDT+ IK +V TICMG A M A LL AGAK Sbjct: 62 INSLGDPVMSGQADESAGMISIRAGLAVYDTIAHIKSEVLTICMGTAYGMAAVLLAAGAK 121 Query: 123 GKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREILKVKGRMNELMALHTGQSLEQIERDT 182 GKR LP++ + + P +GQATDI + A E+L + + +++A TGQS E+I +D Sbjct: 122 GKRAALPHTSIALTHPTTLTRGQATDINLEATEVLAKRKLIQQILANSTGQSAEKIAKDM 181 Query: 183 ERDRFLSAPEAVEYGLVDSILTH 205 ER +LS EA EYGL+D ++ + Sbjct: 182 ERMFYLSPTEAKEYGLIDRVIEN 204 >UniRef50_B3LBC6 ATP-dependent Clp protease proteolytic subunit n=7 Tax=Plasmodium RepID=B3LBC6_PLAKH Length = 1101 Score = 186 bits (474), Expect = 3e-46, Method: Composition-based stats. Identities = 77/200 (38%), Positives = 117/200 (58%), Gaps = 11/200 (5%) Query: 19 MVIEQTSRGERSFDIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYIN 78 +++ + I S LL +R+IFL+ V H++ I++Q+L+LE E+ K I+LYIN Sbjct: 56 LLLSPGEHNQHGISIPSMLLSKRIIFLSSPVYPHISEQIISQLLYLEYESKRKPIHLYIN 115 Query: 79 SPGGV----------ITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCL 128 S G + IT +SI D +++I DV T C+G+A + L ++G KG RF L Sbjct: 116 STGDLENNKIINLNGITDVISIIDVIEYISSDVYTYCLGKAYGISCILASSGKKGFRFSL 175 Query: 129 PNSRVMIHQPLGGY-QGQATDIEIHAREILKVKGRMNELMALHTGQSLEQIERDTERDRF 187 NS ++Q QAT+IEI +EI+ K ++ E++A +TG+ IE+ ERDR+ Sbjct: 176 KNSSFCLNQSYSVIPFNQATNIEIQNKEIMNTKRKVVEIIANNTGKDKSHIEQILERDRY 235 Query: 188 LSAPEAVEYGLVDSILTHRN 207 SAPEAVE+ LVD IL + Sbjct: 236 FSAPEAVEFNLVDHILEKED 255 >UniRef50_Q011H7 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Ostreococcus tauri RepID=Q011H7_OSTTA Length = 174 Score = 186 bits (472), Expect = 5e-46, Method: Composition-based stats. Identities = 54/172 (31%), Positives = 104/172 (60%) Query: 32 DIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIY 91 D++ L ER++FL ++++++A A++L LEAE+PE +I +++N G +I Sbjct: 3 DVFGALASERIVFLGQRIDENVALDACARLLALEAEDPEGEIRIWVNCVAGTQYCVTAIL 62 Query: 92 DTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEI 151 D M+++ +ST+ +G A L+ AG KGKR+ ++R+++ QPLGG G + +++I Sbjct: 63 DMMEYVSCPISTVALGCVAGPPVMLVAAGDKGKRYGTQSARMVLSQPLGGLAGTSIEVKI 122 Query: 152 HAREILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEAVEYGLVDSIL 203 A+E+ + +A +TG+ +++E RD ++ EA+++GL+D L Sbjct: 123 QAKELNRNAKAQVGFIARYTGKDADELEAMMARDTYMGVQEAIDFGLLDHAL 174 >UniRef50_Q3LW65 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Bigelowiella natans RepID=Q3LW65_BIGNA Length = 207 Score = 183 bits (466), Expect = 3e-45, Method: Composition-based stats. Identities = 71/162 (43%), Positives = 108/162 (66%) Query: 42 VIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIYDTMQFIKPDV 101 ++ L G V+D++A+LI + LF ++ + K++ L INSPGG +TAG+ I D + ++K Sbjct: 45 ILSLYGGVDDNIADLIFKKALFTKSVDNNKELTLLINSPGGSVTAGLKIMDALNYVKVRN 104 Query: 102 STICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREILKVKG 161 +T+C+ AASMGAFLL +G++ R L NSR+MIHQPLGG G + +EI A EIL K Sbjct: 105 NTVCLALAASMGAFLLASGSRNYRQALLNSRIMIHQPLGGAFGDSLGVEIQANEILYFKL 164 Query: 162 RMNELMALHTGQSLEQIERDTERDRFLSAPEAVEYGLVDSIL 203 ++ ++ + L +I DT+RD F+S+ +A YGL+D IL Sbjct: 165 VLSGYLSDFCRKPLNEILVDTDRDYFMSSKQATNYGLIDKIL 206 >UniRef50_Q2WGG1 ATP-dependent Clp protease proteolytic subunit (Fragment) n=2 Tax=Tracheophyta RepID=Q2WGG1_SELUN Length = 206 Score = 181 bits (461), Expect = 1e-44, Method: Composition-based stats. Identities = 74/192 (38%), Positives = 108/192 (56%), Gaps = 3/192 (1%) Query: 17 VPMVIEQTSRGER--SFDIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIY 74 VP V + S E D ++R +ER+ ++D AN + EN +D + Sbjct: 5 VPKVSFRISGEEDMVRIDTHNRPYRERLPSSGQHMDDETANQPIRITTHPNGENRSQDTH 64 Query: 75 LYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVM 134 Y N PGG ++AG+S+YDTMQ PDV TI +G AASMG + T G +R LP++RVM Sbjct: 65 SYTNPPGGAVSAGISVYDTMQSAVPDVHTIRVGLAASMGPSISTGGEITRRMALPHARVM 124 Query: 135 IHQPLGGYQ-GQATDIEIHAREILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEA 193 IHQP + GQA + + A EILK++ + ++ A TG+ L + +D ERD F A EA Sbjct: 125 IHQPASSFYEGQAGERLMEAEEILKLRDCITKIHARKTGKPLWVVSKDMERDVFTPAREA 184 Query: 194 VEYGLVDSILTH 205 +G+ D ++T Sbjct: 185 RVHGITDPVVTE 196 >UniRef50_C7Z253 ATP-dependent Clp protease proteolytic subunit n=3 Tax=Fungi/Metazoa group RepID=C7Z253_NECH7 Length = 157 Score = 181 bits (459), Expect = 1e-44, Method: Composition-based stats. Identities = 73/139 (52%), Positives = 99/139 (71%), Gaps = 7/139 (5%) Query: 75 LYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVM 134 +YINSPGG +T+GM+IYDTM +IK VST+C+G AASM A LL G GKRF LP+S +M Sbjct: 1 MYINSPGGSVTSGMAIYDTMSYIKSPVSTVCVGGAASMAAILLAGGEAGKRFSLPHSSIM 60 Query: 135 IHQPLGGYQGQATDIEIHAREILKVKGRMNELMALHTGQ-------SLEQIERDTERDRF 187 IHQPLGG +GQA+DI I+A +I K++ + N +M H + ++E+I ERD++ Sbjct: 61 IHQPLGGTRGQASDILIYANQIQKIREQSNHIMQYHLNKAKGHDKYTIEEINDLMERDKY 120 Query: 188 LSAPEAVEYGLVDSILTHR 206 LS EA+E G++D ILT R Sbjct: 121 LSPDEALELGVIDEILTKR 139 >UniRef50_UPI000196C506 hypothetical protein CATMIT_02666 n=1 Tax=Catenibacterium mitsuokai DSM 15897 RepID=UPI000196C506 Length = 178 Score = 180 bits (458), Expect = 2e-44, Method: Composition-based stats. Identities = 72/171 (42%), Positives = 106/171 (61%), Gaps = 1/171 (0%) Query: 32 DIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIY 91 D S RVI++T ++ D +A I QM L A + +DI L+I SPGG +TAG++I Sbjct: 4 DCISEEFSRRVIYITDEITDSLAADICCQMNHLAAVS-NEDITLWIMSPGGSVTAGLAIL 62 Query: 92 DTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEI 151 DTM ++ D+ TI MGQAASM A + ++G KGKR+ N+ +MIHQ L G+ GQ TDI Sbjct: 63 DTMNSVECDIKTIVMGQAASMAAVIASSGTKGKRYIGTNAWMMIHQALAGFSGQTTDILR 122 Query: 152 HAREILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEAVEYGLVDSI 202 A+ I ++ + ++A + +E I +D +RD ++A A+ YGLVD I Sbjct: 123 SAQHIEEINNNLYSILARNCSAHIETIAKDCDRDYHMNARTAIVYGLVDHI 173 >UniRef50_B9HMY7 ATP-dependent Clp protease proteolytic subunit n=7 Tax=Spermatophyta RepID=B9HMY7_POPTR Length = 391 Score = 180 bits (457), Expect = 3e-44, Method: Composition-based stats. Identities = 65/189 (34%), Positives = 100/189 (52%), Gaps = 10/189 (5%) Query: 29 RSFDIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPG------- 81 D+ S LL R+ +L + + L+VAQ ++L+ E+P K IYLYINS G Sbjct: 170 APPDLPSLLLDARICYLGMPIVPAVTELLVAQFMYLDYEDPSKPIYLYINSSGTQNEKME 229 Query: 82 --GVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQP- 138 G T +I D M + K + T+ G A A LL+ GAKG R PNS ++ P Sbjct: 230 TVGSETEAYAIADIMSYCKSTIYTVNCGMAYGQAAMLLSLGAKGYRALQPNSSTKLYLPK 289 Query: 139 LGGYQGQATDIEIHAREILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEAVEYGL 198 + G A D+ I A+E+ EL+A TG+ E++ +D +R ++L A EA++YG+ Sbjct: 290 VNRSSGAAVDMWIKAKELDANTEYYIELLAKGTGKPKEELVKDIQRPKYLKAQEAIDYGI 349 Query: 199 VDSILTHRN 207 D +L+ + Sbjct: 350 ADKLLSSND 358 >UniRef50_UPI0000DB7F4F PREDICTED: similar to Putative ATP-dependent Clp protease proteolytic subunit, mitochondrial precursor (Endopeptidase Clp), partial n=1 Tax=Apis mellifera RepID=UPI0000DB7F4F Length = 222 Score = 179 bits (455), Expect = 5e-44, Method: Composition-based stats. Identities = 80/117 (68%), Positives = 100/117 (85%) Query: 16 LVPMVIEQTSRGERSFDIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYL 75 LVPMV+EQTSRGER+FDIYSRLLKER+IFLTG V D +A+LI AQ+L+LE+ NP+K+I Sbjct: 106 LVPMVVEQTSRGERAFDIYSRLLKERIIFLTGPVYDQVASLISAQLLYLESVNPKKEISF 165 Query: 76 YINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSR 132 YINSPGGV++AG++IYDTMQ+I+ VST+C+GQAASMG+ LL G RF LPN+R Sbjct: 166 YINSPGGVVSAGLAIYDTMQYIRCPVSTVCIGQAASMGSLLLCGGEPNNRFALPNAR 222 >UniRef50_B2X1V4 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Oedogonium cardiacum RepID=B2X1V4_OEDCA Length = 560 Score = 179 bits (454), Expect = 6e-44, Method: Composition-based stats. Identities = 60/172 (34%), Positives = 101/172 (58%), Gaps = 2/172 (1%) Query: 36 RLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIYDTMQ 95 +LK I + + +LI A+ E +K ++++INS GG + +G+++YD +Q Sbjct: 346 NMLKTSTILEKKRKREEAEDLIFAES--QERMQEQKRVFVFINSTGGSVHSGITVYDALQ 403 Query: 96 FIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHARE 155 F+K T+C+G A S + +L G G R+ VMIHQP GG QGQA+D+ + E Sbjct: 404 FVKAGTVTVCLGTAFSASSLVLAGGNIGHRYVSEGGHVMIHQPEGGIQGQASDVVVDTHE 463 Query: 156 ILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEAVEYGLVDSILTHRN 207 +++V+ + + AL + +S +I +D +RD F++ EA++YGL D I+T N Sbjct: 464 LMRVRRQAATIYALCSKRSFHEILKDLDRDYFMTPQEAIDYGLADEIVTRYN 515 Score = 43.3 bits (101), Expect = 0.005, Method: Composition-based stats. Identities = 10/44 (22%), Positives = 25/44 (56%) Query: 29 RSFDIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKD 72 + D+Y + + R+IF+ +++ + N I M+++ E+ K+ Sbjct: 19 QWIDLYHLIFRRRLIFVMSELDQELCNQIAGMMIYIHFEDKRKE 62 >UniRef50_Q9XJ35 ATP-dependent Clp protease proteolytic subunit-related protein 1, chloroplastic n=4 Tax=Embryophyta RepID=CLPR1_ARATH Length = 387 Score = 178 bits (452), Expect = 1e-43, Method: Composition-based stats. Identities = 69/189 (36%), Positives = 100/189 (52%), Gaps = 10/189 (5%) Query: 29 RSFDIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPG------- 81 D+ S LL R+ +L + + L+VAQ ++L+ +NP K IYLYINSPG Sbjct: 168 APPDLPSLLLDARICYLGMPIVPAVTELLVAQFMWLDYDNPTKPIYLYINSPGTQNEKME 227 Query: 82 --GVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQP- 138 G T +I DT+ + K DV TI G A A LL+ G KG R P+S ++ P Sbjct: 228 TVGSETEAYAIADTISYCKSDVYTINCGMAFGQAAMLLSLGKKGYRAVQPHSSTKLYLPK 287 Query: 139 LGGYQGQATDIEIHAREILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEAVEYGL 198 + G A D+ I A+E+ EL+A TG+S EQI D +R ++L A A++YG+ Sbjct: 288 VNRSSGAAIDMWIKAKELDANTEYYIELLAKGTGKSKEQINEDIKRPKYLQAQAAIDYGI 347 Query: 199 VDSILTHRN 207 D I ++ Sbjct: 348 ADKIADSQD 356 >UniRef50_Q872F9 ATP-dependent Clp protease proteolytic subunit n=3 Tax=Sordariales RepID=Q872F9_NEUCR Length = 158 Score = 178 bits (452), Expect = 1e-43, Method: Composition-based stats. Identities = 69/139 (49%), Positives = 98/139 (70%), Gaps = 7/139 (5%) Query: 75 LYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVM 134 +YINSPGG +++G++IYDTM +IK VST+C+G AASM A LL G GKR+ LP+S VM Sbjct: 1 MYINSPGGEVSSGLAIYDTMTYIKSPVSTVCVGAAASMAAVLLIGGEPGKRYVLPHSTVM 60 Query: 135 IHQPLGGYQGQATDIEIHAREILKVKGRMNELMALHTGQ-------SLEQIERDTERDRF 187 +HQPLGG +GQA+DI I+A +I +++ ++N+++ H + L I ERD++ Sbjct: 61 VHQPLGGTRGQASDILIYANQIQRIREQINKIVQSHVNKAFGYEKYDLAAISDMMERDKY 120 Query: 188 LSAPEAVEYGLVDSILTHR 206 L+A EAVE G+VD IL R Sbjct: 121 LTAEEAVELGVVDQILDRR 139 >UniRef50_B0LP79 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Oenothera fruticosa RepID=B0LP79_OENFR Length = 295 Score = 178 bits (451), Expect = 1e-43, Method: Composition-based stats. Identities = 65/178 (36%), Positives = 105/178 (58%), Gaps = 1/178 (0%) Query: 30 SFDIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMS 89 D+++ L ++R++FL +++ + N IV M++L +NP D+ +INSPGG+ G Sbjct: 20 WLDLFNILYRKRILFLGQEIDVELGNHIVGLMVYLGIDNPFLDMIFFINSPGGLAIPGFG 79 Query: 90 IYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQA-TD 148 IYD MQ+IKP+V TI +G ASM + +L+ G KGKR N R+MIHQP Y+ Sbjct: 80 IYDIMQYIKPNVYTIGLGVVASMASLILSGGGKGKRIGGKNMRIMIHQPAMSYRKDPLRT 139 Query: 149 IEIHAREILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEAVEYGLVDSILTHR 206 I A + ++ ++ + TG+ I + ER+ F+++ EA+ +G+VDSI R Sbjct: 140 ILREAEGMSCLRTQVLKCYIKKTGKDCGVINKLLERNTFMTSTEALGFGIVDSIADGR 197 >UniRef50_Q3Z7J8 ATP-dependent Clp protease proteolytic subunit n=24 Tax=root RepID=Q3Z7J8_DEHE1 Length = 242 Score = 177 bits (449), Expect = 2e-43, Method: Composition-based stats. Identities = 44/167 (26%), Positives = 80/167 (47%), Gaps = 4/167 (2%) Query: 39 KERVIFLTGQVEDHM--ANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIYDTMQF 96 +R ++L G++ D + + Q+ E + + +I L+INSPGG + A IY+ + Sbjct: 19 SDRTLYLDGEISDETWFGDEVTPQLFKDELSSGDGNITLWINSPGGDVFAAAQIYNMLMD 78 Query: 97 IKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREI 156 DV+ AAS + + AG K P + +MIH P G +++ + Sbjct: 79 YPHDVTVKIDALAASAASVIAMAGT--KVCMSPVAMMMIHNPATIAIGDTEEMQKAIDML 136 Query: 157 LKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEAVEYGLVDSIL 203 +VK + + +G S +I + + + +++A EAV+ G D IL Sbjct: 137 NEVKESIMNAYEIKSGLSRHKISQLMDAETWMNAKEAVKLGFADEIL 183 >UniRef50_B1X3L4 ATP-dependent Clp protease proteolytic subunit n=2 Tax=Paulinella chromatophora RepID=B1X3L4_PAUCH Length = 193 Score = 176 bits (448), Expect = 3e-43, Method: Composition-based stats. Identities = 75/166 (45%), Positives = 111/166 (66%), Gaps = 1/166 (0%) Query: 40 ERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIYDTMQFIKP 99 +R +F+ G ++D MAN +VA +L++ A + + I + I+S GG IT+ +IYDT+ +I Sbjct: 2 QRTLFVAGDIDDTMANDLVAALLYMNAVSTKIPICINIDSRGGSITSAFTIYDTINYISA 61 Query: 100 DVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGY-QGQATDIEIHAREILK 158 V T+C+ A SM FLL AG KG+RF LPNSR+++ QP+G QA+D+ I E+ Sbjct: 62 PVKTVCLSVAESMAVFLLAAGEKGQRFALPNSRIIMEQPIGNVDYRQASDLLIETIEMGF 121 Query: 159 VKGRMNELMALHTGQSLEQIERDTERDRFLSAPEAVEYGLVDSILT 204 K R+NE MA TGQ + +IE+DT R +SA E+V+YGL+D +LT Sbjct: 122 TKRRINECMAEMTGQPMTKIEQDTSRRYHMSAAESVKYGLIDHVLT 167 >UniRef50_Q06SH9 ATP-dependent Clp protease proteolytic subunit n=2 Tax=Chlorophyceae RepID=Q06SH9_STIHE Length = 518 Score = 176 bits (447), Expect = 4e-43, Method: Composition-based stats. Identities = 60/191 (31%), Positives = 116/191 (60%), Gaps = 9/191 (4%) Query: 22 EQTSRGERSFDI--YSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAE---NPEKDIYLY 76 Q + ++ D+ YS+++++ +++ + + +LF+E + + ++++ Sbjct: 287 YQDLKDQKIHDLSSYSKVMED--MYIPQNIRQKKSES--EDLLFMETQERLQEQSRVFVF 342 Query: 77 INSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIH 136 INS GG +++G++IYD +QF+K T+C+G A S + +L G G R+ + VMIH Sbjct: 343 INSTGGSVSSGITIYDALQFVKTGAVTVCLGMAFSASSMVLAGGNIGHRYVAEGAHVMIH 402 Query: 137 QPLGGYQGQATDIEIHAREILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEAVEY 196 QP GG GQA+D+ + A EIL+++ ++ + +L + ++L ++ +D +RD F++ EAV+Y Sbjct: 403 QPEGGITGQASDVLLDAYEILRIRRQVATIYSLCSKRALSEVLKDLDRDNFMTPQEAVDY 462 Query: 197 GLVDSILTHRN 207 GL D I+T N Sbjct: 463 GLADEIVTRYN 473 >UniRef50_A4E7Q8 ATP-dependent Clp protease proteolytic subunit n=2 Tax=Collinsella RepID=A4E7Q8_9ACTN Length = 205 Score = 176 bits (447), Expect = 4e-43, Method: Composition-based stats. Identities = 58/199 (29%), Positives = 112/199 (56%), Gaps = 6/199 (3%) Query: 9 NFAPHMALVPMVIEQTSRGERSFDIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAEN 68 N +P ++ P+ + +++RG IY +L R + + G +E MA+ + Q+ L+A + Sbjct: 4 NHSPIIS--PLTMRESARGITLTSIYDEMLARRELSVMGNIETPMAHDLCQQIRLLDATD 61 Query: 69 PEKDIYLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCL 128 P + I +++ S GG + +G++IYD M+ + T+C+ AASMGA + G + Sbjct: 62 PSRPITIFVASAGGSVRSGLAIYDAMRLASCPIRTVCLEFAASMGAVIFMGGDDCR--MA 119 Query: 129 PNSRVMIHQPLG--GYQGQATDIEIHAREILKVKGRMNELMALHTGQSLEQIERDTERDR 186 P++ +MIH PL G G A ++ +R +++ + + ++++ +G + ++I+ T +D Sbjct: 120 PHAELMIHDPLIPQGAGGSALALQETSRRLMQTRKTLTQILSDRSGLTPKRIQSLTAKDT 179 Query: 187 FLSAPEAVEYGLVDSILTH 205 +LSA AVE G IL+ Sbjct: 180 YLSAERAVELGFAHEILST 198 >UniRef50_A8IXD6 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Chlamydomonas reinhardtii RepID=A8IXD6_CHLRE Length = 276 Score = 174 bits (443), Expect = 1e-42, Method: Composition-based stats. Identities = 63/189 (33%), Positives = 104/189 (55%), Gaps = 12/189 (6%) Query: 29 RSFDIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPG------- 81 D+ +RL ER+++L ++ +A L+ AQ+ L E P+ I+ YINS G Sbjct: 41 PPPDLATRLFSERIMYLGMPIDSSVAELLTAQLFVLVQEAPD-PIFFYINSTGIAKSTTK 99 Query: 82 -GVITAGMSIYDTMQFIK--PDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQP 138 G +++Y M+ ++ + T+C+G A A LL+AG+ GKR L +S +M+ QP Sbjct: 100 FGNEHEAIAVYSMMKGVQKYCPIYTLCVGNAFGEAALLLSAGSPGKRAALRSSTIMLRQP 159 Query: 139 LGGYQG-QATDIEIHAREILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEAVEYG 197 L G QA+DI+I+ + + M + +A T ++ EQI D R R+ + EAV YG Sbjct: 160 LQRLGGMQASDIDIYRKITREKTATMAKYLAACTKKTEEQIMTDFTRPRYFNPYEAVSYG 219 Query: 198 LVDSILTHR 206 L+D++L + Sbjct: 220 LIDTVLEPK 228 >UniRef50_A4S2Q5 ATP-dependent Clp protease proteolytic subunit n=4 Tax=Mamiellales RepID=A4S2Q5_OSTLU Length = 381 Score = 174 bits (442), Expect = 2e-42, Method: Composition-based stats. Identities = 57/206 (27%), Positives = 102/206 (49%), Gaps = 22/206 (10%) Query: 10 FAPHMALVPMVIEQTSRGERSFDIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENP 69 AP A+ P D+ S LL R+ ++ + + L+VA++L+L E Sbjct: 139 MAPAGAVAPP------------DLPSLLLNARICYIGMSLVPAVTELVVAELLYLGYEQA 186 Query: 70 EKDIYLYINSPG---------GVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAG 120 EK Y+YINS G G+ +I DTM++I+P + T+ +G+ + +L AG Sbjct: 187 EKPCYVYINSGGSLNEKGEVVGMDNEAYAILDTMRYIRPKIHTVAVGKCHGNASLILAAG 246 Query: 121 AKGKRFCLPNSRVMIHQP-LGGYQGQATDIEIHAREILKVKGRMNELMALHTGQSLEQIE 179 KG R LP+ ++ P L +++I A E + M+ +G+ ++ + Sbjct: 247 DKGCRHALPHVQISTQPPKLNRTFDSTQNVQIRANECALYEDTYMGFMSEFSGKDIDVVR 306 Query: 180 RDTERDRFLSAPEAVEYGLVDSILTH 205 +D +R R+ + +A+EYGL+D ++T Sbjct: 307 KDLDRTRYFTPNQAIEYGLIDKVITK 332 >UniRef50_Q2VPX8 ATP-dependent Clp protease proteolytic subunit (Fragment) n=1 Tax=Bifidobacterium pullorum RepID=Q2VPX8_9BIFI Length = 139 Score = 173 bits (440), Expect = 2e-42, Method: Composition-based stats. Identities = 70/129 (54%), Positives = 95/129 (73%) Query: 77 INSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIH 136 INSPGG ITAGM+IYDTMQ I+PDV+T+ +G ASMG FLL++GAKGKR+ ++RV++H Sbjct: 1 INSPGGSITAGMAIYDTMQLIEPDVATVGLGMCASMGQFLLSSGAKGKRYLTSHARVLMH 60 Query: 137 QPLGGYQGQATDIEIHAREILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEAVEY 196 QP GG G TD+ I+A I+ +K + EL A TG ++E+I RD E D + +A +A+EY Sbjct: 61 QPSGGIGGTTTDVRINAELIMDMKRTLAELTAEQTGHTVEEIYRDNEYDHWFTAQQALEY 120 Query: 197 GLVDSILTH 205 G VD I+T Sbjct: 121 GFVDKIVTT 129 >UniRef50_B0LNX5 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Silene fruticosa RepID=B0LNX5_9CARY Length = 397 Score = 171 bits (433), Expect = 2e-41, Method: Composition-based stats. Identities = 61/174 (35%), Positives = 107/174 (61%), Gaps = 1/174 (0%) Query: 30 SFDIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMS 89 ++Y+ +R++FL ++++ +AN ++ +++L E+ +DI+L+INSPGG + AG+ Sbjct: 216 WVELYTLTYHKRLLFLCDKLKNELANKLINLLIYLSTEDTTEDIFLFINSPGGFLGAGLG 275 Query: 90 IYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDI 149 +Y+T+QF+ P VSTI +G A S+ AF+L GA KR P + VM+HQP T I Sbjct: 276 LYNTIQFVPPQVSTIALGIAGSISAFVLVGGALSKRVAYPCAXVMMHQPASTKHKNKTRI 335 Query: 150 EI-HAREILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEAVEYGLVDSI 202 + + ++L ++ + + TG++ + I D ER F+SA EA +G+VD + Sbjct: 336 CVMESFDLLTIRDMITNVYIQRTGKTKQVIYEDMERPFFMSATEAQVHGIVDHV 389 >UniRef50_C5YWZ8 ATP-dependent Clp protease proteolytic subunit n=5 Tax=Poaceae RepID=C5YWZ8_SORBI Length = 388 Score = 170 bits (431), Expect = 3e-41, Method: Composition-based stats. Identities = 65/184 (35%), Positives = 92/184 (50%), Gaps = 10/184 (5%) Query: 30 SFDIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGG------- 82 + D+ S LL R+IFL + + LI AQ L+L+ ++ K IYLYINS G Sbjct: 162 APDLPSLLLDSRIIFLGMPIVPAVTELIAAQFLWLDYDDRTKPIYLYINSTGTMDENNEL 221 Query: 83 --VITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLG 140 T +I D + K V TI + A A LL+ G KGKR LPNS +H P Sbjct: 222 VASETDAYAIADFINRSKSKVYTINLSMAYGQAAMLLSLGVKGKRGVLPNSITKLHLPKV 281 Query: 141 -GYQGQATDIEIHAREILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEAVEYGLV 199 G A D+ I A+E+ EL++ G+ E++ + R+ A EA++YGL Sbjct: 282 HKSGGAAIDMWIKAKELDTNTDYYLELLSKGVGKPKEELAEFLKGPRYFRAQEAIDYGLA 341 Query: 200 DSIL 203 D+IL Sbjct: 342 DTIL 345 >UniRef50_D1NE80 ATP-dependent Clp protease proteolytic subunit (Fragment) n=2 Tax=Haemophilus influenzae HK1212 RepID=D1NE80_HAEIN Length = 269 Score = 169 bits (429), Expect = 5e-41, Method: Composition-based stats. Identities = 73/111 (65%), Positives = 92/111 (82%) Query: 96 FIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHARE 155 FIKPD+ T+C+GQA SMGAFLL G GKR LPN+RVMIHQPLGG++GQA+DI+IHA+E Sbjct: 159 FIKPDIRTLCIGQACSMGAFLLAGGTAGKRAALPNARVMIHQPLGGFRGQASDIQIHAQE 218 Query: 156 ILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEAVEYGLVDSILTHR 206 ILK+K +N+ +A HTGQS+E+IE+DT+RD F+SA EA YGLVD +L R Sbjct: 219 ILKIKHTLNDRLAFHTGQSIERIEKDTDRDNFMSAEEAQAYGLVDEVLVKR 269 >UniRef50_B7ZIH9 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Ephedra equisetina RepID=B7ZIH9_EPHEU Length = 221 Score = 169 bits (429), Expect = 5e-41, Method: Composition-based stats. Identities = 56/171 (32%), Positives = 95/171 (55%), Gaps = 5/171 (2%) Query: 37 LLKERVIFLTGQVEDHMANLIVAQMLFLEAEN----PEKDIYLYINSPGGVITAGMSIYD 92 + + R IFL V++ + ++ V +L+L ++ + I++YINS GG I G+SI+D Sbjct: 1 MSRTRCIFLGQPVDEDIGSIFVGILLYLFIDDIRKGKSRQIFMYINSCGGAILPGLSIFD 60 Query: 93 TMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQ-GQATDIEI 151 M ++ + TI +G AS +L+AG G R P+SR+MIHQP + G A Sbjct: 61 IMLQLRETIHTIGLGLVASTATLVLSAGTFGFRNTGPHSRIMIHQPRASLRDGPAWLFAK 120 Query: 152 HAREILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEAVEYGLVDSI 202 A + +++ + + L T Q E IE +++ ++S EAV++GLVD + Sbjct: 121 DAFFVQQLRKMIVQCYCLRTPQFEELIENALDKNTYMSPEEAVDFGLVDRV 171 >UniRef50_B0LNM7 ATP-dependent Clp protease proteolytic subunit n=2 Tax=Silene RepID=B0LNM7_SILCO Length = 247 Score = 168 bits (426), Expect = 1e-40, Method: Composition-based stats. Identities = 60/214 (28%), Positives = 95/214 (44%), Gaps = 40/214 (18%) Query: 29 RSFDIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGM 88 +I + L ++R++F+ +++ + I +L L EN KD L+INS GG + Sbjct: 22 TWTEIQNFLYEKRILFIFEEIKPKVTCEITGLLLCLSNENEYKDFTLFINSAGGKTRDAL 81 Query: 89 SIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQ----- 143 IYDTMQ + P V T+ +G AASMGA +L G GKR PN R+ IH P + Sbjct: 82 PIYDTMQVVAPAVRTVGIGVAASMGALILLGGEMGKRAASPNCRIKIHLPASAFYTTDSD 141 Query: 144 -----------------------------------GQATDIEIHAREILKVKGRMNELMA 168 D E+L+++ ++ A Sbjct: 142 SNSDSDSNSDSTSDSNSDTDKKKKEKDPKKKKEQSRSVEDFSDGVGEMLRLREEFVKIYA 201 Query: 169 LHTGQSLEQIERDTERDRFLSAPEAVEYGLVDSI 202 T + + IE+D R F+S+ EA YG++D++ Sbjct: 202 KRTQKPISVIEKDLARGLFMSSEEAKAYGIIDTL 235 >UniRef50_B1X3L5 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Paulinella chromatophora RepID=B1X3L5_PAUCH Length = 219 Score = 164 bits (416), Expect = 1e-39, Method: Composition-based stats. Identities = 69/200 (34%), Positives = 108/200 (54%), Gaps = 22/200 (11%) Query: 25 SRGERSFDIYSRLLKERVIFLTGQV--EDH----------MANLIVAQMLFLEAENPEKD 72 E D+ S LL ER+I+L + +D + L++AQ+L LE E+ Sbjct: 18 YGIESMSDLASILLSERIIYLGMALASDDETRQSFSLGMNVTQLMIAQLLCLEFESNSA- 76 Query: 73 IYLYINSPG---------GVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKG 123 I +YINS G G T +IYDT++FI+ V T C+G A LL GA G Sbjct: 77 ITIYINSTGSTDINSNAIGHETEAFAIYDTIRFIESPVHTFCVGVAMGTATMLLACGASG 136 Query: 124 KRFCLPNSRVMIHQPLGGYQGQATDIEIHAREILKVKGRMNELMALHTGQSLEQIERDTE 183 R LPN+ ++++QP G +TDI I ++L + M+E++++H G+SL+QI D Sbjct: 137 CRASLPNASIILNQPYNYVGGSSTDINIQVEQLLLSRSIMHEILSIHIGKSLQQIRSDCN 196 Query: 184 RDRFLSAPEAVEYGLVDSIL 203 R L+A +A+ YG++D ++ Sbjct: 197 RIHHLTAYQALHYGIIDDVI 216 >UniRef50_B7C8Y7 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7C8Y7_9FIRM Length = 181 Score = 164 bits (416), Expect = 1e-39, Method: Composition-based stats. Identities = 60/164 (36%), Positives = 100/164 (60%), Gaps = 1/164 (0%) Query: 41 RVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIYDTMQFIKPD 100 R+I L G+V M+ +V ++ L A+N + I + I+SPGG + GM I D M+ I+ Sbjct: 19 RIINLWGEVTPEMSLYVVTRLQELNAKNHD-PITIQIHSPGGSLRDGMIIIDMMEAIQSP 77 Query: 101 VSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREILKVK 160 V T+ +G A SM + +L AG KG R L +S +M+HQ +G+ +DI+ A+ +++ + Sbjct: 78 VYTMALGNAMSMASLILAAGEKGHRKALKHSTIMVHQGSTICEGKFSDIKSGAKRMVETE 137 Query: 161 GRMNELMALHTGQSLEQIERDTERDRFLSAPEAVEYGLVDSILT 204 + EL +TG++ +I D + D FLS+ +AVEYGL+D ++ Sbjct: 138 EMIEELYVKYTGKTKRKIHADLQMDLFLSSDKAVEYGLIDEVVE 181 >UniRef50_C1FD32 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Micromonas sp. RCC299 RepID=C1FD32_9CHLO Length = 247 Score = 162 bits (410), Expect = 9e-39, Method: Composition-based stats. Identities = 53/154 (34%), Positives = 88/154 (57%), Gaps = 3/154 (1%) Query: 53 MANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIYDTMQFIKP---DVSTICMGQA 109 +A + A++L L E+P+KDI L++N+ G +I D M++I+ D+S + MG Sbjct: 85 VATRVCAELLALSYEDPDKDIRLFVNATAGTQYCVQTILDMMEYIQSKGVDISVVGMGCV 144 Query: 110 ASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREILKVKGRMNELMAL 169 A A LL AG KGKR +P+ R+++ QPLGG G + ++ I A+E+ + + A Sbjct: 145 AGPPAMLLAAGTKGKRLAMPSCRIILSQPLGGLSGTSYEVRIQAKELSRNARMQVAVFAK 204 Query: 170 HTGQSLEQIERDTERDRFLSAPEAVEYGLVDSIL 203 TG+S + + RD ++S EA E L+D ++ Sbjct: 205 FTGKSFDDMGEYLVRDTYMSPQEAKELNLIDGVI 238 >UniRef50_A8IH07 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Chlamydomonas reinhardtii RepID=A8IH07_CHLRE Length = 415 Score = 161 bits (409), Expect = 9e-39, Method: Composition-based stats. Identities = 55/180 (30%), Positives = 95/180 (52%), Gaps = 11/180 (6%) Query: 38 LKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGG---------VITAGM 88 +R+++L + + L+VA++L+LE + I + INS G + G+ Sbjct: 57 FDQRIVYLGMPLVPAVTELMVAELLYLEKQGATLPIEMLINSSGTTRQDGEILSFDSEGV 116 Query: 89 SIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQ--A 146 ++ TM FIK +ST+ MG A +L+ G KG R LP+S MI QP GQ A Sbjct: 117 ALTSTMGFIKNPISTVNMGLAVGWSCVVLSFGRKGWRKSLPHSLAMIQQPRVPPTGQRQA 176 Query: 147 TDIEIHAREILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEAVEYGLVDSILTHR 206 ++ I RE+L K + + +L TG +++++ D +R ++ +A+EYG++D I+ Sbjct: 177 IEVHIKWREVLDYKRELLRMFSLGTGLPVDKLDADMQRPLYMRPQDALEYGIIDEIIEPN 236 >UniRef50_B5A4F3 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Gymnochlora stellata RepID=B5A4F3_GYMST Length = 216 Score = 161 bits (409), Expect = 9e-39, Method: Composition-based stats. Identities = 67/167 (40%), Positives = 108/167 (64%) Query: 37 LLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIYDTMQF 96 +L + ++FL G+V D +A+ I+ +++L K++ L INSPGG +T+G+++YD+ Sbjct: 49 MLNKEILFLYGEVNDTIADTIIKNIIYLNNTTTTKNLTLMINSPGGSVTSGLAMYDSFNL 108 Query: 97 IKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREI 156 + + T C+ AASMGAFLL +G KGKR + R+MIHQPLGG G IE A E+ Sbjct: 109 VDMHIGTTCIALAASMGAFLLGSGYKGKRNGFNHCRIMIHQPLGGIVGSFNQIESQANEL 168 Query: 157 LKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEAVEYGLVDSIL 203 L K +N ++ + Q+ ++ RD +RD F+S+ EA +YG++D++L Sbjct: 169 LYYKLVLNSYISNFSSQAPVKVMRDCDRDYFMSSREAAKYGIIDNVL 215 >UniRef50_B5YV95 ATP-dependent Clp protease proteolytic subunit n=136 Tax=root RepID=B5YV95_ECO5E Length = 1156 Score = 161 bits (409), Expect = 1e-38, Method: Composition-based stats. Identities = 42/162 (25%), Positives = 78/162 (48%), Gaps = 7/162 (4%) Query: 43 IFLTGQVEDH--MANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIYDTMQFIKPD 100 I++ ++ A V++ L A I L+INSPGG + G++I++ ++ Sbjct: 516 IYIYDEIGFWGVTAKQFVSE---LNALGDITHINLHINSPGGDVFEGIAIFNALKNQGAT 572 Query: 101 VSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREILKVK 160 ++ G AASM + + AG N+ +MIH+P G G A D+ +A + KV+ Sbjct: 573 ITVYVDGVAASMASVIAMAG--DTVIMPENAFMMIHKPWGFSGGDAEDMRSYADLLDKVE 630 Query: 161 GRMNELMALHTGQSLEQIERDTERDRFLSAPEAVEYGLVDSI 202 + A TG++ ++I + ++S E + +G D + Sbjct: 631 SVLLPAYAQKTGKTTDEIAAMLADETWMSGAECLAHGFADQV 672 >UniRef50_A0JQM5 ATP-dependent Clp protease proteolytic subunit n=2 Tax=Lactobacillus RepID=A0JQM5_LACS1 Length = 249 Score = 160 bits (406), Expect = 2e-38, Method: Composition-based stats. Identities = 42/171 (24%), Positives = 81/171 (47%), Gaps = 8/171 (4%) Query: 43 IFLTGQV-EDHMANLIVAQMLF---LEAENPEKDIYLYINSPGGVITAGMSIYDTMQFIK 98 I + G++ + + ++ F L+ K I L+INSPGG + G++I++ ++ K Sbjct: 26 ISIYGEIVSEKWFDEEISATSFKDDLDDLGDVKTINLHINSPGGSVFEGIAIHNMLKMNK 85 Query: 99 PDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREILK 158 ++ G AAS+ + + +G F NS +MIH P G + ++ A ++ + Sbjct: 86 AKINVYVDGLAASIASVIAMSG--DTIFMPENSMLMIHNPWTVAMGNSKELRKQADDLDR 143 Query: 159 VKGRMNELMALHTG--QSLEQIERDTERDRFLSAPEAVEYGLVDSILTHRN 207 + + + E + + + + +LSA EAV+YGL D +L Sbjct: 144 IAQASVKTYLSKSNGKIDEETLVKLLDEETWLSAQEAVDYGLADEVLESNK 194 >UniRef50_C8VJ02 ATP-dependent Clp protease proteolytic subunit n=8 Tax=Leotiomyceta RepID=C8VJ02_EMENI Length = 135 Score = 160 bits (405), Expect = 3e-38, Method: Composition-based stats. Identities = 66/117 (56%), Positives = 87/117 (74%), Gaps = 4/117 (3%) Query: 94 MQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHA 153 M +I VSTIC+GQAASMG+ LL G G+R+CLP+S +MIHQP GGY GQATDI IHA Sbjct: 1 MTYIASPVSTICVGQAASMGSLLLCGGQAGQRYCLPHSSIMIHQPSGGYFGQATDIAIHA 60 Query: 154 REILKVKGRMNELMALH-TGQ---SLEQIERDTERDRFLSAPEAVEYGLVDSILTHR 206 +EIL+V+ ++N++ H TG+ SL++IE+ ERD F+ A EA+E G+VD IL R Sbjct: 61 KEILRVRHQLNQIYKRHLTGKKELSLDEIEKLMERDYFMGAREALELGIVDEILDRR 117 >UniRef50_B6G8S8 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Collinsella stercoris DSM 13279 RepID=B6G8S8_9ACTN Length = 193 Score = 159 bits (403), Expect = 5e-38, Method: Composition-based stats. Identities = 55/176 (31%), Positives = 95/176 (53%), Gaps = 3/176 (1%) Query: 29 RSFDIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGM 88 D+ S L RV+ L QV + + ++A ML LE ++PE I L ++SPGG + AG+ Sbjct: 18 DHLDVLSELYNSRVLMLNEQVTPAVCSQLIANMLVLERKDPEAPITLLVSSPGGDVYAGL 77 Query: 89 SIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQ-GQAT 147 + D M+ + V T+ G ASM + +L G R P++ +++HQ + G Q T Sbjct: 78 GLIDVMRDLSCPVDTVGYGLVASMASVILACGR--HRSAYPHTNILLHQLMTGAGMSQQT 135 Query: 148 DIEIHAREILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEAVEYGLVDSIL 203 DI I A ++ +++E++A S +++ TERD + A+E G++D ++ Sbjct: 136 DISIVANHAASLRAKLDEMLAERMSLSADEVHELTERDCWCDVGRALELGVIDEVI 191 >UniRef50_A7FWE0 ATP-dependent Clp protease proteolytic subunit n=4 Tax=cellular organisms RepID=A7FWE0_CLOB1 Length = 252 Score = 159 bits (403), Expect = 5e-38, Method: Composition-based stats. Identities = 40/145 (27%), Positives = 71/145 (48%), Gaps = 4/145 (2%) Query: 64 LEAENPEKDIYLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKG 123 L++ + +YINSPGG + G +IY+ ++ K ++ G AAS+ + + AG Sbjct: 46 LDSLGDIDTLNIYINSPGGSVFQGQAIYNIIKRHKAKINIHVDGVAASIASVIAMAG--N 103 Query: 124 KRFCLPNSRVMIHQPLGGYQGQATDIEIHAREILKVKGRMNELMALHTG--QSLEQIERD 181 F NS +MIH P G A ++ A ++ K++ + E G S E + Sbjct: 104 TIFMPKNSMMMIHNPWTFAYGNAKELRKQADDLDKIRESLIEAYLSKAGDKLSRETLIGI 163 Query: 182 TERDRFLSAPEAVEYGLVDSILTHR 206 + + +L+A E +YGL D ++ + Sbjct: 164 MDNETWLTAQECYDYGLCDELVEEK 188 >UniRef50_A3DG62 ATP-dependent Clp protease proteolytic subunit n=4 Tax=root RepID=A3DG62_CLOTH Length = 247 Score = 158 bits (401), Expect = 9e-38, Method: Composition-based stats. Identities = 44/137 (32%), Positives = 70/137 (51%), Gaps = 2/137 (1%) Query: 71 KDIYLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPN 130 KDI ++INS GG + A IY ++ K V G A S + + AG + P Sbjct: 55 KDINVWINSYGGDVYAASRIYTGLKEHKGKVKVKIDGVAISAASVIAMAG--DEILMSPT 112 Query: 131 SRVMIHQPLGGYQGQATDIEIHAREILKVKGRMNELMALHTGQSLEQIERDTERDRFLSA 190 S +M+H P G +QG+A D+ A + +VK + L TG+S +I + + + ++SA Sbjct: 113 SIIMLHNPWGTFQGEAKDLRHGADVLDEVKETIINAYQLKTGKSRAKISQMMDEETWMSA 172 Query: 191 PEAVEYGLVDSILTHRN 207 +AV G D +L +N Sbjct: 173 KKAVAEGFADGMLYEKN 189 >UniRef50_C3WMS7 ATP-dependent Clp protease proteolytic subunit n=2 Tax=Fusobacteriaceae RepID=C3WMS7_9FUSO Length = 358 Score = 157 bits (397), Expect = 3e-37, Method: Composition-based stats. Identities = 41/136 (30%), Positives = 70/136 (51%), Gaps = 3/136 (2%) Query: 71 KDIYLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPN 130 ++I ++INSPGG + A ++I +T++ K V+ G AAS + +A K N Sbjct: 50 ENINVHINSPGGSVFAAVAIANTLKNHKAKVTAFIDGLAASAATIITSACDVVK--MPKN 107 Query: 131 SRVMIHQPLGGYQGQATDIEIHAREILKVKGRMNELM-ALHTGQSLEQIERDTERDRFLS 189 + MIH PL G ++E + KVK + E A G++ E++ + +++ + Sbjct: 108 AMFMIHNPLTWAYGNKQELEKTGILLDKVKDSILETYLAKAKGKTKEELSALMDEEKWFN 167 Query: 190 APEAVEYGLVDSILTH 205 A EA EYG +D I+ Sbjct: 168 AEEAKEYGFIDEIVDE 183 >UniRef50_B3JP66 ATP-dependent Clp protease proteolytic subunit n=10 Tax=Bacteroidales RepID=B3JP66_9BACE Length = 368 Score = 154 bits (390), Expect = 1e-36, Method: Composition-based stats. Identities = 52/178 (29%), Positives = 94/178 (52%), Gaps = 7/178 (3%) Query: 29 RSFDIYSRLLKERVIFLTGQVED--HMANLIVAQMLFLEAENPEKDIYLYINSPGGVITA 86 R F+I + IFL G + D + + +AQ L +EAE + I++ INS GG + + Sbjct: 25 RFFNITTSDDGTSTIFLYGDIGDYTEVQSGRIAQEL-MEAERVSRRIHVRINSNGGEVYS 83 Query: 87 GMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQA 146 G++I++ ++ + D+ G AASM + + G + +R+M+H GG G Sbjct: 84 GIAIFNALRHSQADIRIYVDGIAASMASVIALCGKPVE--MSKYARLMLHSVSGGCYGNK 141 Query: 147 TDIEIHAREILKVKGRMNELMALHTGQSLEQIER--DTERDRFLSAPEAVEYGLVDSI 202 D++ EI ++G ++E+ A G S E++++ D +L+A EA++ G +D I Sbjct: 142 QDLQRCMEEIESLEGSLSEIYAERLGMSKEEVKQTYFDGEDHWLTAKEALDLGFIDDI 199 >UniRef50_Q65ES6 ATP-dependent Clp protease proteolytic subunit n=2 Tax=Bacillus licheniformis ATCC 14580 RepID=Q65ES6_BACLD Length = 243 Score = 154 bits (390), Expect = 2e-36, Method: Composition-based stats. Identities = 39/146 (26%), Positives = 69/146 (47%), Gaps = 4/146 (2%) Query: 64 LEAENPEKDIYLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKG 123 L++ I LYINSPGG + G +I+ +Q K ++ A S+ + + AG Sbjct: 48 LKSLGDVSSIDLYINSPGGDVFEGQAIHSMLQRHKAKINVYVDALAGSIASVIAMAG--D 105 Query: 124 KRFCLPNSRVMIHQPLGGYQGQATDIEIHAREILKVKGRMNELMALHTGQSLE--QIERD 181 K N+ +MIH P G G A + A ++ K+ + G L+ + + Sbjct: 106 KITMPSNAMMMIHNPYMGMVGNAAEFRKAADDLDKITESIVSTYLAKAGDKLDDGTLRQL 165 Query: 182 TERDRFLSAPEAVEYGLVDSILTHRN 207 + + +L+A EA+ YGL+D + ++ Sbjct: 166 LDEETWLTADEALNYGLIDEVSESKD 191 >UniRef50_B2TQV1 ATP-dependent Clp protease proteolytic subunit n=2 Tax=Clostridium botulinum RepID=B2TQV1_CLOBB Length = 247 Score = 153 bits (386), Expect = 5e-36, Method: Composition-based stats. Identities = 46/187 (24%), Positives = 85/187 (45%), Gaps = 9/187 (4%) Query: 21 IEQTSRGERSFDIY--SRLLKERVIFLTGQ-VEDHMANLIVAQMLFLEAENPEKDIYLYI 77 I+Q + DIY + + + TG+ +E + + Q+ LE+ +I LYI Sbjct: 8 IKQQANKPNVLDIYIYDNVEGDSYNWWTGEKMESETSANYIKQV--LESNQSTSEINLYI 65 Query: 78 NSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQ 137 NS GG + G+ IY+ ++ V+ G A S+ + + G K N+ +MIH Sbjct: 66 NSYGGEVKEGLGIYNQLKRHPAQVNVYIDGFACSIASVIAMVG--DKVVMGTNALMMIHH 123 Query: 138 PLGGYQGQATDIEIHAREILKVKGRMNELMALHTGQSLEQ--IERDTERDRFLSAPEAVE 195 G G A ++ A ++ + G+ L++ +++ + +L+A + +E Sbjct: 124 ASIGCYGNAEELRKAANDVEVIDQASCSSYLTKAGEKLDEATLKQLLDNQTWLNASQCLE 183 Query: 196 YGLVDSI 202 YGL D I Sbjct: 184 YGLCDEI 190 >UniRef50_A3JIS6 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Marinobacter sp. ELB17 RepID=A3JIS6_9ALTE Length = 621 Score = 152 bits (385), Expect = 6e-36, Method: Composition-based stats. Identities = 45/170 (26%), Positives = 81/170 (47%), Gaps = 8/170 (4%) Query: 37 LLKERVIFLTGQVEDHM--ANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIYDTM 94 LL + I++ G + + A V + L + + + + INS GG ++ ++IY+ + Sbjct: 8 LLAQNEIYIYGPIGEGNVSAKAFVDALKTL---DTAQTVNVRINSEGGDVSHAIAIYNAL 64 Query: 95 QFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAR 154 + PDV G AAS +F+ AG K N+ +MIH+P G G + + Sbjct: 65 NEL-PDVMIHIDGLAASSASFVAMAG--NKTLMAGNAILMIHRPWTGAVGDSDAMRQTGE 121 Query: 155 EILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEAVEYGLVDSILT 204 + K + + A TG S +++ + +L+A EA+E G VD ++ Sbjct: 122 ILDKFQPILVSAYAKKTGLSDDKLNEMLAAETWLTAAEALELGFVDEVIE 171 >UniRef50_A5KJS2 ATP-dependent Clp protease proteolytic subunit n=6 Tax=Firmicutes RepID=A5KJS2_9FIRM Length = 268 Score = 152 bits (385), Expect = 6e-36, Method: Composition-based stats. Identities = 46/166 (27%), Positives = 77/166 (46%), Gaps = 4/166 (2%) Query: 40 ERVIFLTGQVEDHM--ANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIYDTMQFI 97 ER +FL G + D + + Q+ E +I ++INSPGG + A IY+ ++ Sbjct: 20 ERTLFLNGMISDETWYGDEVTPQLFKDELNAGNGNITVWINSPGGDVFAAAQIYNMLRDY 79 Query: 98 KPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREIL 157 K V+ G AAS + + AG P + +MIH P G+A D++ + Sbjct: 80 KGSVTVKIDGIAASAASVIAMAG--DTVCVSPVAMMMIHNPATMAMGEAKDMQKAIAMLN 137 Query: 158 KVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEAVEYGLVDSIL 203 +VK + TG + ++ + + + +A +AVE G D IL Sbjct: 138 EVKESILNAYEFKTGLTRARLSHMMDDETWFNAKKAVELGFADKIL 183 >UniRef50_B0TCT9 ATP-dependent Clp protease proteolytic subunit n=9 Tax=Firmicutes RepID=B0TCT9_HELMI Length = 254 Score = 152 bits (384), Expect = 7e-36, Method: Composition-based stats. Identities = 51/199 (25%), Positives = 85/199 (42%), Gaps = 12/199 (6%) Query: 7 RDNFAPHMALVPMVIEQTSRGERSFDIYSRLLKERVIFLTGQVEDH--MANLIVAQMLFL 64 ++ P L P R ++ R ++L G + + + + + + Sbjct: 11 KNPQNPQRGLGPA--------SRWWNWVQNEDGSRTLYLDGPIAEESWLGDEVTPKQFKS 62 Query: 65 EAENPEKDIYLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGK 124 E + E DI ++INSPGG + A IY+ + K V+ G AAS + + AG G Sbjct: 63 ELLSGEGDITIWINSPGGDVFAASQIYNMLMDYKGKVTVKIDGIAASAASVIAMAG--GD 120 Query: 125 RFCLPNSRVMIHQPLGGYQGQATDIEIHAREILKVKGRMNELMALHTGQSLEQIERDTER 184 P S +MIH P G ++E + ++K + L TG S +I + Sbjct: 121 VLMSPVSMIMIHNPATIAIGDTEEMEKAIAMLEEIKESIINAYELKTGLSRAKISHLMDA 180 Query: 185 DRFLSAPEAVEYGLVDSIL 203 + + +A +AVE G D IL Sbjct: 181 ESWFNARKAVELGFADGIL 199 >UniRef50_C1D8G7 ATP-dependent Clp protease proteolytic subunit n=4 Tax=Proteobacteria RepID=C1D8G7_LARHH Length = 252 Score = 151 bits (383), Expect = 1e-35, Method: Composition-based stats. Identities = 39/133 (29%), Positives = 61/133 (45%), Gaps = 2/133 (1%) Query: 73 IYLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSR 132 I+L INSPGG + A ++ ++ K + G AAS F+ AG + + Sbjct: 69 IHLRINSPGGSVFAARAMEQALREHKARIVVHIDGIAASAATFIAMAG--DEIVMNKGAM 126 Query: 133 VMIHQPLGGYQGQATDIEIHAREILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPE 192 MIH+ G A D+ A + K+ G + + A TG+ +E I + + +A E Sbjct: 127 FMIHKAWTWTAGNADDLAKEAGLLAKIDGTLAQTYADRTGKDVETINGWMADETWFTADE 186 Query: 193 AVEYGLVDSILTH 205 AVEYG D + Sbjct: 187 AVEYGFADKLAET 199 >UniRef50_C5CJP6 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Variovorax paradoxus S110 RepID=C5CJP6_VARPS Length = 227 Score = 151 bits (382), Expect = 1e-35, Method: Composition-based stats. Identities = 41/136 (30%), Positives = 66/136 (48%), Gaps = 2/136 (1%) Query: 71 KDIYLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPN 130 K + +YINSPGG + G++IY+ ++ + G AAS+ + + AG + + N Sbjct: 45 KALDIYINSPGGSVFEGLAIYNQIKRFDGEKIVHVDGIAASIASVIAMAGDEVRIAA--N 102 Query: 131 SRVMIHQPLGGYQGQATDIEIHAREILKVKGRMNELMALHTGQSLEQIERDTERDRFLSA 190 +MIH P G G A D+ A + KV+ + E TG E I + +++A Sbjct: 103 GTIMIHDPWGMAMGTAADMRKQAESLDKVRDVLLENYVARTGGKREDISSWMTAETWMNA 162 Query: 191 PEAVEYGLVDSILTHR 206 EAVE G S + + Sbjct: 163 DEAVERGFATSKVEEK 178 >UniRef50_Q2NPI5 ClpP family protein n=3 Tax=unclassified Siphoviridae RepID=Q2NPI5_9CAUD Length = 245 Score = 151 bits (381), Expect = 2e-35, Method: Composition-based stats. Identities = 52/199 (26%), Positives = 95/199 (47%), Gaps = 8/199 (4%) Query: 11 APHMALVPMVIEQTSRGERSFDIYSRLL----KERVIFLTGQVEDHMANLIVAQM-LFLE 65 AP L P I ++ + +DI R +E IF +D AQ+ FLE Sbjct: 9 APEGRLDPDTISKSKEIQAKWDIAPRAAWRDGREINIFSVIGRDDLNDGTTSAQIGSFLE 68 Query: 66 AENPEKDIYLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKR 125 A P D+ + I+SPGG + AG++IY+ + + V+ +G+AAS + + +G + Sbjct: 69 AMGP-GDVTVNIDSPGGDMFAGLAIYNQLIAHQGKVTVNVVGRAASAASVIAMSG--DQI 125 Query: 126 FCLPNSRVMIHQPLGGYQGQATDIEIHAREILKVKGRMNELMALHTGQSLEQIERDTERD 185 ++ +MIH G A ++ A + M ++ + Q+ + + + + + Sbjct: 126 NMHTSAFLMIHNCHLVIGGNAKELMSVAAMMEPFDSAMADIYVARSSQAKDTVVQMMDNE 185 Query: 186 RFLSAPEAVEYGLVDSILT 204 +++A EAV+ G DSI+T Sbjct: 186 TWMNAEEAVKMGFADSIVT 204 >UniRef50_Q3Z3P3 ATP-dependent Clp protease proteolytic subunit n=5 Tax=Enterobacteriaceae RepID=Q3Z3P3_SHISS Length = 381 Score = 151 bits (381), Expect = 2e-35, Method: Composition-based stats. Identities = 39/132 (29%), Positives = 63/132 (47%), Gaps = 2/132 (1%) Query: 72 DIYLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNS 131 +I+L I+SPGG I G++IY+ ++ G AASM +F+ G N+ Sbjct: 44 EIHLRIHSPGGDIFEGLAIYNALKNHPAKKIVHIEGMAASMASFIAMCG--DHIVMPENA 101 Query: 132 RVMIHQPLGGYQGQATDIEIHAREILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAP 191 +MIH P G G + D+ A + K+ M E A TG+S ++I E + ++ Sbjct: 102 MMMIHAPRGVTAGVSGDVRRFADLMDKLGDTMAETYAGRTGRSKQEITAMMEAETWMDGN 161 Query: 192 EAVEYGLVDSIL 203 E G D ++ Sbjct: 162 ECKANGFADEVI 173 >UniRef50_B9CLK4 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Atopobium rimae ATCC 49626 RepID=B9CLK4_9ACTN Length = 260 Score = 150 bits (379), Expect = 3e-35, Method: Composition-based stats. Identities = 35/138 (25%), Positives = 68/138 (49%), Gaps = 2/138 (1%) Query: 65 EAENPEKDIYLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGK 124 E + K + ++INS GG + G++IY+ ++ +V T+C G A S+ + + AG+ + Sbjct: 56 ELSDDVKTVEVHINSYGGEVMQGVAIYNALRDCGREVVTVCDGFACSIASVIFMAGS--R 113 Query: 125 RFCLPNSRVMIHQPLGGYQGQATDIEIHAREILKVKGRMNELMALHTGQSLEQIERDTER 184 R P S +M+H P +G A D+ A + + T E ++ + Sbjct: 114 RIMRPASLLMLHNPWVSARGNAQDLRKQADTLDTIAELSKTAYMTGTSLDRETLDAVMDA 173 Query: 185 DRFLSAPEAVEYGLVDSI 202 + ++S +A+E+GL + Sbjct: 174 ETWVSPEQALEWGLATEV 191 >UniRef50_B5R8Q7 ATP-dependent Clp protease proteolytic subunit n=25 Tax=root RepID=B5R8Q7_SALG2 Length = 709 Score = 150 bits (379), Expect = 3e-35, Method: Composition-based stats. Identities = 44/194 (22%), Positives = 83/194 (42%), Gaps = 11/194 (5%) Query: 18 PMVIEQTSRGE----RSFDIYSRLLKERVIFLTGQVEDH--MANLIVAQMLFLEAENPEK 71 P++ RGE + I + + + ++ A ++ L N Sbjct: 28 PVMTAGNGRGEGSSNSWYSIRAAANNTAEVRIYDEIGGWGISARWFAEELAALGQINR-- 85 Query: 72 DIYLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNS 131 I L+I+SPGG + G++IY+ ++ + G A SM + + G N+ Sbjct: 86 -INLHIHSPGGAVLDGIAIYNLLKNHPAQKTVYIDGMACSMASAIAMVGNP--IIMPENA 142 Query: 132 RVMIHQPLGGYQGQATDIEIHAREILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAP 191 +MIH+P G G+A DI +A + K++ + + TG++ E I ++ ++S Sbjct: 143 MMMIHKPRGVAGGEAEDIREYADLLDKIESVIIPIYTEKTGKTPEDIAAMLAKETWMSGA 202 Query: 192 EAVEYGLVDSILTH 205 E V G D ++ Sbjct: 203 ECVSEGFADKLIQP 216 >UniRef50_A5BHP1 ATP-dependent Clp protease proteolytic subunit n=5 Tax=core eudicotyledons RepID=A5BHP1_VITVI Length = 429 Score = 149 bits (378), Expect = 4e-35, Method: Composition-based stats. Identities = 58/97 (59%), Positives = 74/97 (76%) Query: 109 AASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREILKVKGRMNELMA 168 SMGAFLL+ G KGKR+ LPNSR+MIHQPLGG QG TDI+I A E+L K +N ++ Sbjct: 319 VGSMGAFLLSCGTKGKRYSLPNSRIMIHQPLGGAQGGQTDIDIQANEMLHHKANLNGYLS 378 Query: 169 LHTGQSLEQIERDTERDRFLSAPEAVEYGLVDSILTH 205 HTGQSLE+I +DT+RD F+SA EA EYGL+D ++ + Sbjct: 379 YHTGQSLEKINQDTDRDFFMSAKEAKEYGLIDGVILN 415 Score = 126 bits (318), Expect = 4e-28, Method: Composition-based stats. Identities = 52/114 (45%), Positives = 75/114 (65%), Gaps = 5/114 (4%) Query: 2 SYSGERDNFAPHMALVPMVIEQTSR-----GERSFDIYSRLLKERVIFLTGQVEDHMANL 56 ++S D P A P + ER + S+L + R+I G V+D MAN+ Sbjct: 67 TWSIRDDLQIPSSAYFPTYAQGGQGPPPMVQERFQSVVSQLFQHRIIRCGGAVDDDMANI 126 Query: 57 IVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAA 110 IVAQ+L+L+A +P+KDI +Y+NSPGG +TAGM+I+DTM+ I+PDVST+C+G AA Sbjct: 127 IVAQLLYLDAVDPDKDIVMYVNSPGGSVTAGMAIFDTMRHIRPDVSTVCVGLAA 180 >UniRef50_A3DFX4 ATP-dependent Clp protease proteolytic subunit n=6 Tax=Bacteria RepID=A3DFX4_CLOTH Length = 242 Score = 148 bits (374), Expect = 1e-34, Method: Composition-based stats. Identities = 49/184 (26%), Positives = 84/184 (45%), Gaps = 4/184 (2%) Query: 22 EQTSRGERSFDIYSRLLKERVIFLTGQVEDH--MANLIVAQMLFLEAENPEKDIYLYINS 79 ++ R ++ R +++ G + + + + + + E + E DI ++INS Sbjct: 5 QKQKPVRRFWNWIQNDDGSRTLYIDGPIAEESWLGDEVTPKQFKSELLSGEGDITIWINS 64 Query: 80 PGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPL 139 PGG I A IY+ + K V+ G AAS + + AG G F P S +MIH P+ Sbjct: 65 PGGDIFAANQIYNMLMDYKGKVTVKIDGIAASAASVIAMAG--GDVFMSPVSMMMIHNPM 122 Query: 140 GGYQGQATDIEIHAREILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEAVEYGLV 199 G ++E + ++K + L TG S +I + + + +A +AVE G Sbjct: 123 TIAIGDTEEMEKAIAMLEEIKESIINAYELKTGLSRAKISHLMDAESWFNARKAVELGFA 182 Query: 200 DSIL 203 D IL Sbjct: 183 DGIL 186 >UniRef50_C9ZCK7 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Streptomyces scabiei 87.22 RepID=C9ZCK7_STRSW Length = 165 Score = 148 bits (374), Expect = 1e-34, Method: Composition-based stats. Identities = 57/126 (45%), Positives = 75/126 (59%), Gaps = 2/126 (1%) Query: 84 ITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLG--G 141 +TA ++YDT +F+ DV T+C GQA S A L AG GKR LP +R +IHQP Sbjct: 26 LTAMTALYDTNRFVTCDVETVCPGQAGSAAAVLPAAGTPGKRSMLPGARALIHQPAMADP 85 Query: 142 YQGQATDIEIHAREILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEAVEYGLVDS 201 +GQA D I A E+ + + M E++ HTG+S E+I D ERD FL A AV YGL D Sbjct: 86 VEGQAGDPAIRAEELTRHRRTMEEMLVRHTGRSPERIGADIERDTFLDAEAAVAYGLADR 145 Query: 202 ILTHRN 207 ++ R Sbjct: 146 VVQSRR 151 >UniRef50_B2KDB1 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Elusimicrobium minutum Pei191 RepID=B2KDB1_ELUMP Length = 355 Score = 148 bits (373), Expect = 1e-34, Method: Composition-based stats. Identities = 61/170 (35%), Positives = 92/170 (54%), Gaps = 7/170 (4%) Query: 41 RVIFLTGQVEDHMANLIVAQMLFL-EAENPEKDIYLYINSPGGVITAGMSIYDTMQFIKP 99 R I++T + A IVAQ+ + E + I +Y+N GG TA +I D M Sbjct: 3 REIYITADISKETATDIVAQIKAMSEGIGANQPIKMYVNCFGGSATAMFTILDAMATCPC 62 Query: 100 DVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQA---TDIEIHAREI 156 ++ T+ +G+A S A + +AG+ KRF NSRVMIH+ A + IE +E Sbjct: 63 EIITVNLGEADSAAALIFSAGS--KRFITENSRVMIHEVRLSTLYSAEPLSQIEAELKEF 120 Query: 157 LKVKGRMNELMALHTGQSLEQIERDT-ERDRFLSAPEAVEYGLVDSILTH 205 + M + +A +TG+ E+I+ D +D +LSA EA+EYGL D+ILT Sbjct: 121 QILNDNMFKALAKNTGKKPEEIKADVFGKDLYLSAEEAIEYGLADAILTT 170 >UniRef50_A1WEU3 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Verminephrobacter eiseniae EF01-2 RepID=A1WEU3_VEREI Length = 229 Score = 147 bits (371), Expect = 3e-34, Method: Composition-based stats. Identities = 67/220 (30%), Positives = 103/220 (46%), Gaps = 35/220 (15%) Query: 22 EQTSRGERSFDIYSRLL----KERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYI 77 EQ E + ++L+ R +F+ G ++ MA V Q+ L + N + IY++I Sbjct: 4 EQKESTEPPGTMSAKLMEYAINARKVFIIGTIDHKMAKEAVQQLHILASINDD-PIYVFI 62 Query: 78 NSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQ 137 +SPGG + +G I+D ++FI P V + G AS GA + A K R+ LPN+ ++H Sbjct: 63 SSPGGHVESGDLIFDAIRFITPKVIVVSSGWVASAGALIYVAADKENRYSLPNTHFLLHM 122 Query: 138 ----PLGGYQGQATDIEIHARE--------------------------ILKVKGRMNELM 167 P G T + ARE ++ R+N + Sbjct: 123 KEIIPAGEMTYTETADDRAARERFAQFVSSSYRKKPPEPVNKSLHEYRTNVMRARLNRIF 182 Query: 168 ALHTGQSLEQIERDTERDRFLSAPEAVEYGLVDSILTHRN 207 A TGQ+LE+I DT D ++SA +AVEYGLV I+ Sbjct: 183 AEATGQTLEKITADTGHDFWMSAEQAVEYGLVHEIIVSEK 222 >UniRef50_B7UZW7 ATP-dependent Clp protease proteolytic subunit n=20 Tax=root RepID=B7UZW7_PSEA8 Length = 296 Score = 146 bits (369), Expect = 5e-34, Method: Composition-based stats. Identities = 43/207 (20%), Positives = 83/207 (40%), Gaps = 20/207 (9%) Query: 17 VPMVIEQTSRGERSFDIYSRLLK--------------ERVIFLTGQVEDHM--ANLIVAQ 60 +P E R D+ + L + I + + + A+ Sbjct: 6 LPAAPEARPRSGVQCDLAPKALDAWRPELRAASGDNPDSTITIYEPIGYDWWTGEGVTAK 65 Query: 61 MLF--LEAENPEKDIYLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLT 118 + L + + D+ + INSPGG + G++IY+ ++ K V+ +G AAS +F+ Sbjct: 66 RIAGALRSIGSDIDVTVNINSPGGDVFEGLAIYNLLREHKGKVTVNIIGLAASAASFIAM 125 Query: 119 AGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREILKVKGRMNELMALHTGQSLEQI 178 AG + + +MIH G D+ A + + ++ A TG ++ I Sbjct: 126 AG--DEIRIGRAAFLMIHNAWLIAMGNRNDLREIADWLEPFDMTLADIYAQRTGIDIDDI 183 Query: 179 ERDTERDRFLSAPEAVEYGLVDSILTH 205 + + + ++ EAV+ G D+ L Sbjct: 184 VKQMDAETWIGGREAVDKGWADAFLES 210 >UniRef50_C1ZNA8 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Planctomyces limnophilus DSM 3776 RepID=C1ZNA8_PLALI Length = 262 Score = 146 bits (368), Expect = 6e-34, Method: Composition-based stats. Identities = 30/136 (22%), Positives = 64/136 (47%), Gaps = 2/136 (1%) Query: 72 DIYLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNS 131 ++ + INS GG + +IY ++ ++ G+A S +++ AG K + Sbjct: 63 EVVIRINSVGGYVGEASAIYQLLKEHPANIHVKIDGEAISCASWIAMAG--DKITIAEHG 120 Query: 132 RVMIHQPLGGYQGQATDIEIHAREILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAP 191 +M+H P G A D+ A + K + + A +G +E +++ + +++A Sbjct: 121 LMMVHDPSTWISGTADDLRKEAEVLDSYKEVIAGIYAARSGTDVEDVKKMMSDETWMTAT 180 Query: 192 EAVEYGLVDSILTHRN 207 +A + G VD I +++ Sbjct: 181 QAKDKGFVDEISANKS 196 >UniRef50_A5V8D3 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Sphingomonas wittichii RW1 RepID=A5V8D3_SPHWW Length = 688 Score = 146 bits (368), Expect = 6e-34, Method: Composition-based stats. Identities = 41/160 (25%), Positives = 77/160 (48%), Gaps = 6/160 (3%) Query: 43 IFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIYDTM---QFIKP 99 I + G V D L ++ L + + D+ + INSPGG + G++IY+ + + Sbjct: 4 ILIYGIVGDSWDGLDANTIVPLISAGDD-DLDVRINSPGGYVMEGLAIYNAIIRERGKGR 62 Query: 100 DVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREILKV 159 V+T G AASMG+ L AG + N+ +MIH P G A ++ A + ++ Sbjct: 63 KVTTHIDGLAASMGSILAMAGE--EIVMADNALLMIHNPWDCACGDAIELRRAADRLDQL 120 Query: 160 KGRMNELMALHTGQSLEQIERDTERDRFLSAPEAVEYGLV 199 + +M + + TG + + + + +++A EA+ + Sbjct: 121 RDQMVGIYSKATGLEADALIPMLDAETWMTATEALALNFI 160 >UniRef50_Q4UBQ0 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Theileria annulata RepID=Q4UBQ0_THEAN Length = 261 Score = 146 bits (368), Expect = 6e-34, Method: Composition-based stats. Identities = 52/168 (30%), Positives = 90/168 (53%), Gaps = 10/168 (5%) Query: 50 EDHMANLIVAQMLFLEAENPEKDIYLYINSPG---------GVITAGMSIYDTMQFIKPD 100 +A+L+++Q+L+L+ ++ +K I +YINS ++I D M ++K + Sbjct: 94 NSGVAHLVISQLLYLDYDSQDKPIKIYINSDNERSNEDGISTSEIDALNIVDVMNYLKNE 153 Query: 101 VSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQ-PLGGYQGQATDIEIHAREILKV 159 V TI +G+A A +L +G GKR+ LP S ++ Q P QA DI I++REILK Sbjct: 154 VITINLGKAYGPAALILASGTPGKRYVLPRSYTLLRQSPTTLSFRQAEDIAIYSREILKA 213 Query: 160 KGRMNELMALHTGQSLEQIERDTERDRFLSAPEAVEYGLVDSILTHRN 207 + + ++ + +S E+I ++ + E V +GL D IL + N Sbjct: 214 RRSVIKVFSKACNKSEEEILEKINVGDYMGSQETVNFGLADKILENIN 261 >UniRef50_C5R880 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Weissella paramesenteroides ATCC 33313 RepID=C5R880_WEIPA Length = 242 Score = 145 bits (366), Expect = 9e-34, Method: Composition-based stats. Identities = 41/163 (25%), Positives = 73/163 (44%), Gaps = 6/163 (3%) Query: 43 IFLTGQVEDH--MANLIVAQMLF--LEAENPEKDIYLYINSPGGVITAGMSIYDTMQFIK 98 I + G++ + + A L+ P K I + INSPGG + G++IY+ ++ Sbjct: 15 IHIDGEIVSEKLWDSDVSATDFRDSLKELGPVKTINMSINSPGGSVFDGIAIYNMLKKNP 74 Query: 99 PDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREILK 158 V+ G AAS+ + + AG S +MIH P G A+++ A + + Sbjct: 75 ATVNVTVEGLAASIASVIAMAG--DTLTMDTGSMLMIHNPFTMAVGNASELREMADTLDQ 132 Query: 159 VKGRMNELMALHTGQSLEQIERDTERDRFLSAPEAVEYGLVDS 201 ++ + TG E I+ + + +L+A EA+ G D Sbjct: 133 IRESSVNIYHEKTGIDKEAIKSVMDNETWLTADEAITAGWADQ 175 >UniRef50_C2KJ97 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Leuconostoc mesenteroides subsp. cremoris ATCC 19254 RepID=C2KJ97_LEUMC Length = 235 Score = 145 bits (366), Expect = 1e-33, Method: Composition-based stats. Identities = 40/139 (28%), Positives = 64/139 (46%), Gaps = 2/139 (1%) Query: 64 LEAENPEKDIYLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKG 123 L+ I L INS GG + G++IY+ ++ K V+ G AAS+ + + AG Sbjct: 41 LKELGDVSTINLSINSGGGSVFDGIAIYNMLKSHKATVNVYIEGLAASIASVIAMAG--D 98 Query: 124 KRFCLPNSRVMIHQPLGGYQGQATDIEIHAREILKVKGRMNELMALHTGQSLEQIERDTE 183 S +M+H P QG A ++ A + K + ++ + TG S + I Sbjct: 99 TITMRSGSMIMVHMPWTLSQGNAEEMRKTADTLEKTGDSIVDIYSERTGISSDDIRNIMN 158 Query: 184 RDRFLSAPEAVEYGLVDSI 202 + +LSA EAVE G + Sbjct: 159 DETWLSAEEAVEQGWATKL 177 >UniRef50_C4KQ21 ATP-dependent Clp protease proteolytic subunit n=12 Tax=Burkholderia RepID=C4KQ21_BURPS Length = 366 Score = 144 bits (365), Expect = 1e-33, Method: Composition-based stats. Identities = 42/184 (22%), Positives = 76/184 (41%), Gaps = 10/184 (5%) Query: 25 SRGERSFDIYSRL------LKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYIN 78 R + +DI ++ + E I+ A V+Q+ + A+ I + IN Sbjct: 2 KRNRKWWDIRAQAQAGGGKVAEIRIYSDIGFWGTDAQNFVSQLDAVAADASS--ITVAIN 59 Query: 79 SPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQP 138 S GG + +IY+ ++ V G AAS + +L A + N+ +MIH P Sbjct: 60 SMGGDVFDAFAIYNALRRYAGKVKGRVDGIAASAASLVLMAC--DEIEMPENALLMIHHP 117 Query: 139 LGGYQGQATDIEIHAREILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEAVEYGL 198 G++ D+ A + + A +G S + + + + +L+A +A E G Sbjct: 118 HTVAAGESKDLRRVAELLDNASAGILAAYARRSGLSEDDVRAMMDAETWLTAAQAKEKGF 177 Query: 199 VDSI 202 D I Sbjct: 178 CDVI 181 >UniRef50_A4J7R2 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Desulfotomaculum reducens MI-1 RepID=A4J7R2_DESRM Length = 258 Score = 144 bits (365), Expect = 1e-33, Method: Composition-based stats. Identities = 31/137 (22%), Positives = 61/137 (44%), Gaps = 4/137 (2%) Query: 71 KDIYLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPN 130 K+I ++INS GG + G +IY ++ + G A S+ + + AG + N Sbjct: 57 KEIKIFINSYGGSVFEGTAIYSQLRRHPAQKTVYIDGFACSVASVIAMAG--DRVIMPKN 114 Query: 131 SRVMIHQPLGGYQGQATDIEIHAREILKVKGRMNELMALHT--GQSLEQIERDTERDRFL 188 + +MIH G AT + A ++ + + + + E++ + + +L Sbjct: 115 TMMMIHNAWNIVAGNATQLRKAADDLDTIMAGNRQSYLQKSNGKITEEKLIELLDAETWL 174 Query: 189 SAPEAVEYGLVDSILTH 205 +A + +EYG D +L Sbjct: 175 TAEQCIEYGFADELLEK 191 >UniRef50_C2BG30 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Anaerococcus lactolyticus ATCC 51172 RepID=C2BG30_9FIRM Length = 380 Score = 144 bits (365), Expect = 1e-33, Method: Composition-based stats. Identities = 41/168 (24%), Positives = 78/168 (46%), Gaps = 8/168 (4%) Query: 38 LKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIYDTMQFI 97 + +++ + G++ + + +LE E+ I + INS GG + A +IY ++ Sbjct: 28 ISDKIDWELGEINPE---FFSSDLAYLEQEDINTLI-IRINSAGGDVFAATAIYSRLKEF 83 Query: 98 KPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQG--QATDIEIHARE 155 K G AAS + AG + PN +MIH PL G +G A D+ + + Sbjct: 84 KAKKIVKIDGWAASAATIIAMAG--DEIEIAPNGSLMIHDPLFGLEGYFNAKDLIKYIEQ 141 Query: 156 ILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEAVEYGLVDSIL 203 + +K + TG++ E++ + E + + + EAV+ G D ++ Sbjct: 142 LETIKKSIINAYKTKTGKTEEELAQLMEAETWYTGQEAVDAGFCDRLM 189 >UniRef50_A3UVN6 ATP-dependent Clp protease proteolytic subunit n=3 Tax=Vibrionaceae RepID=A3UVN6_VIBSP Length = 670 Score = 144 bits (364), Expect = 2e-33, Method: Composition-based stats. Identities = 42/164 (25%), Positives = 80/164 (48%), Gaps = 8/164 (4%) Query: 43 IFLTGQVE--DHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIYDTMQFIKPD 100 +++ G + D A I+A + K++ L + S GG + G+++Y+ ++ K Sbjct: 20 VWVHGDISAWDIDATEIIAAL----QVANGKEVELRMLSGGGSVYQGLAMYNALKAHKGK 75 Query: 101 VSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREILKVK 160 V I G AAS+ ++L A + N+ +MIH P G G +I +++ Sbjct: 76 VVGIVDGMAASIATYVLLACDSIR--MPENAMLMIHNPAIGAWGGEKEINSALQQLQAAT 133 Query: 161 GRMNELMALHTGQSLEQIERDTERDRFLSAPEAVEYGLVDSILT 204 ++E A +GQ LE++ E + + +A A ++GLVD ++ Sbjct: 134 KTISEAYAEKSGQPLEEVLTAMESETWFTAQAAKDWGLVDEVVE 177 >UniRef50_B1JDT0 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Pseudomonas putida W619 RepID=B1JDT0_PSEPW Length = 620 Score = 144 bits (363), Expect = 2e-33, Method: Composition-based stats. Identities = 36/158 (22%), Positives = 65/158 (41%), Gaps = 8/158 (5%) Query: 45 LTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIYDTMQFIKPDVSTI 104 + ++ A + A ++ + I + INSPGG +T ++IY ++ V+ I Sbjct: 5 IYDVIDAATAQRVKAIVV------GQMPITVQINSPGGSVTDALAIYTVLRKHTGRVTAI 58 Query: 105 CMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREILKVKGRMN 164 G AS + A + +S +M+H P G A ++ A + M Sbjct: 59 VDGLCASAATLVALAA--DEIVMAEHSLMMVHNPWTVASGDADEMRKTADTLDVASREMT 116 Query: 165 ELMALHTGQSLEQIERDTERDRFLSAPEAVEYGLVDSI 202 L TG S E+I + + ++ EAV+ G + Sbjct: 117 ALYTERTGLSAEKITAIMGAETWFNSYEAVDAGFAHRV 154 >UniRef50_A5F9J4 ATP-dependent Clp protease proteolytic subunit n=26 Tax=Firmicutes RepID=A5F9J4_CLOK5 Length = 255 Score = 143 bits (362), Expect = 3e-33, Method: Composition-based stats. Identities = 47/171 (27%), Positives = 76/171 (44%), Gaps = 8/171 (4%) Query: 43 IFLTGQV----EDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIYDTMQFIK 98 IF+ G++ D + L+ I L+INSPGG + G++I + ++ K Sbjct: 22 IFIYGEIVSYKWDDTDTTAASFKKDLDDLGDVNTINLHINSPGGNVFEGVAIGNMLKQHK 81 Query: 99 PDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREILK 158 V+ AAS+ + + +G NS +MIH PL G A D A ++ K Sbjct: 82 AQVNVYVDALAASIASIIAMSG--NTILMPKNSMMMIHNPLSIAWGNAKDFRKKADDLDK 139 Query: 159 VKGRMNELMALHTGQSLEQ--IERDTERDRFLSAPEAVEYGLVDSILTHRN 207 + M G L+Q +++ + D +LSA +A YGL D + N Sbjct: 140 IGLSMQTTYLNKAGDKLDQDTLQKLMDNDTWLSADDAYSYGLCDVVEEENN 190 >UniRef50_Q041N2 ATP-dependent Clp protease proteolytic subunit n=5 Tax=Bacteria RepID=Q041N2_LACGA Length = 223 Score = 142 bits (359), Expect = 6e-33, Method: Composition-based stats. Identities = 45/177 (25%), Positives = 82/177 (46%), Gaps = 4/177 (2%) Query: 29 RSFDIYSRLLKERVIFLTGQV--EDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITA 86 + F +S +RV+ + G + + + + + Q+ E + I L++NSPGG A Sbjct: 2 KRFWNWSGPQNQRVLTINGTIAEDSWVDDEVTPQVFQDELSQGKGPIDLWLNSPGGDCVA 61 Query: 87 GMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQA 146 IY + +V+ G AAS + + AG K +P + +MIH PL GQ Sbjct: 62 ASRIYTMLMNYPDNVNVKIDGIAASAASVIAMAGT--KVSMVPTAMIMIHNPLTIVGGQK 119 Query: 147 TDIEIHAREILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEAVEYGLVDSIL 203 D++ A+ + + K + L T E+I + + +++ +A+E G D +L Sbjct: 120 EDLDQAAQMLAETKESIINAYELKTNLPREKISSMMDDETWMNVNKAIELGFADDML 176 >UniRef50_B7QPY3 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Ruegeria sp. R11 RepID=B7QPY3_9RHOB Length = 377 Score = 142 bits (359), Expect = 6e-33, Method: Composition-based stats. Identities = 35/139 (25%), Positives = 68/139 (48%), Gaps = 2/139 (1%) Query: 61 MLFLEAENPEKDIYLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAG 120 + LE + DI + +NS GG G++IY+ ++ +V+ + G AAS + + AG Sbjct: 31 LEALEELGDDADITVRVNSGGGYTDQGIAIYNALKAHGGEVTVVVDGVAASAASLISMAG 90 Query: 121 AKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREILKVKGRMNELMALHTGQSLEQIER 180 + + +M+H P G G A +I I R + ++ M + A +G + + + Sbjct: 91 --DQIIMRRGATMMLHDPSGFASGMADEIAIAVRALDRIGAVMASIYAEQSGDDPDDLRK 148 Query: 181 DTERDRFLSAPEAVEYGLV 199 + + + +L+ EAV+ G Sbjct: 149 EMKAELWLTGEEAVKRGFA 167 >UniRef50_Q0AG16 ATP-dependent Clp protease proteolytic subunit n=5 Tax=root RepID=Q0AG16_NITEC Length = 228 Score = 142 bits (359), Expect = 7e-33, Method: Composition-based stats. Identities = 46/169 (27%), Positives = 71/169 (42%), Gaps = 6/169 (3%) Query: 39 KERVIFLTGQV--EDHMANLIVAQMLFLEAENPEKD-IYLYINSPGGVITAGMSIYDTMQ 95 E I+L + +D + A E + I+L INSPGG + + +I ++ Sbjct: 9 DEATIYLYDTIVSDDFWGG-VTAISFVKELMAIKAPVIHLRINSPGGDVFSARAIETAIR 67 Query: 96 FIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHARE 155 +V G AAS +++ A + MIH+ G A D+ A Sbjct: 68 EHNSEVIAHIDGVAASAASYIALAA--DNIVIAEGAFYMIHKAWSFAMGNADDLLEMAAL 125 Query: 156 ILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEAVEYGLVDSILT 204 + KV + A TGQ+ +QI + + SA EAVEYG DS+ Sbjct: 126 LEKVDESLVTTYAKRTGQAEDQIRDWMRNETWFSAAEAVEYGFADSVAE 174 >UniRef50_B2Y1Y4 ATP-dependent Clp protease proteolytic subunit n=2 Tax=Welwitschia mirabilis RepID=B2Y1Y4_WELMI Length = 254 Score = 142 bits (359), Expect = 7e-33, Method: Composition-based stats. Identities = 53/183 (28%), Positives = 94/183 (51%), Gaps = 5/183 (2%) Query: 29 RSFDIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAEN----PEKDIYLYINSPGGVI 84 D+ + +R +F+ G + + +I+A + + + + +++YINS GG Sbjct: 3 DFSDLMDLMTVQRCVFMFGPLTEEGGGVILATLFYYFFNDVAEYRNRPVFVYINSLGGAF 62 Query: 85 TAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQG 144 G++I+DTM IK V TI +G AS G LTAG +G R PNS +M+HQP Sbjct: 63 MMGLTIHDTMILIKERVFTIALGMVASTGTLTLTAGTRGIRHAAPNSLIMLHQPSADLDN 122 Query: 145 Q-ATDIEIHAREILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEAVEYGLVDSIL 203 A++ + E+ +++ +M + A+ TG S + I+ ++ F+S A LVD++ Sbjct: 123 TSASEFVKESEEVNQLRRKMVQSYAIRTGHSEQFIDICLDKPLFMSPRTAWNLNLVDNVF 182 Query: 204 THR 206 + Sbjct: 183 VPK 185 >UniRef50_A8U7Z4 ATP-dependent Clp protease proteolytic subunit n=4 Tax=Lactobacillales RepID=A8U7Z4_9LACT Length = 246 Score = 141 bits (356), Expect = 1e-32, Method: Composition-based stats. Identities = 37/169 (21%), Positives = 75/169 (44%), Gaps = 5/169 (2%) Query: 42 VIFLTGQVED---HMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIYDTMQFIK 98 ++ L+G + I A+++ + DI +Y+NS GG + G+ IY+ ++ Sbjct: 21 ILTLSGTIRQRYWDDDKSIDAKLVSDSLDGVTDDIVIYLNSTGGDVFQGIEIYNYLKNHS 80 Query: 99 PDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREILK 158 ++ G AAS F++ + + MIH+ G D++ + Sbjct: 81 SHITVEVTGTAASAATFIVAGA--DEAIMNTGTSFMIHEASSFAWGNKADLKKTLNALET 138 Query: 159 VKGRMNELMALHTGQSLEQIERDTERDRFLSAPEAVEYGLVDSILTHRN 207 + + + TGQS EQ+ E +++ +A EAV+YG + + ++ Sbjct: 139 IDESIIAIYTEKTGQSNEQLNDWMEEEKWFTAEEAVKYGFANKVKENKK 187 >UniRef50_D1ZWV1 ATP-dependent Clp protease proteolytic subunit (Fragment) n=1 Tax=Sordaria macrospora RepID=D1ZWV1_SORMA Length = 187 Score = 141 bits (355), Expect = 2e-32, Method: Composition-based stats. Identities = 52/95 (54%), Positives = 66/95 (69%) Query: 112 MGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREILKVKGRMNELMALHT 171 MG+FLL AG G R L N+R+MIHQP GG QG A+DI+I A+EI ++K RMN L +T Sbjct: 1 MGSFLLAAGEPGMRVALTNARIMIHQPSGGAQGMASDIQIQAKEIQRIKDRMNALYVKYT 60 Query: 172 GQSLEQIERDTERDRFLSAPEAVEYGLVDSILTHR 206 G+ LE+IER +RD FL A EA +GLVD + R Sbjct: 61 GKPLEEIERAMDRDTFLEAEEAKAFGLVDQVFDKR 95 >UniRef50_Q7P8G2 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Fusobacterium nucleatum subsp. vincentii ATCC 49256 RepID=Q7P8G2_FUSNV Length = 344 Score = 140 bits (353), Expect = 3e-32, Method: Composition-based stats. Identities = 41/150 (27%), Positives = 70/150 (46%), Gaps = 5/150 (3%) Query: 57 IVAQMLFLEAENPEKDI---YLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMG 113 + A ++ E EN DI LYINSPGG +T G +IY ++ K + GQ +S+ Sbjct: 32 VSADQVYKELENFGNDIDTINLYINSPGGSVTEGCAIYSALKRHKAVKNVYIDGQCSSIA 91 Query: 114 AFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREILKVKGRMNELMALHTGQ 173 + + AG K P + +MIH P+ G A ++ A + +K + + Sbjct: 92 SVIAMAG--DKIAMSPVATMMIHNPITALAGDAIELRKTAAILDIMKETIINAYVTKSHL 149 Query: 174 SLEQIERDTERDRFLSAPEAVEYGLVDSIL 203 S E+I + + + +A +A+E G + Sbjct: 150 SREEISALMDTETYFTADQAIEKGFATEKI 179 >UniRef50_A8Z285 ATP-dependent Clp protease proteolytic subunit n=34 Tax=root RepID=A8Z285_STAAT Length = 257 Score = 140 bits (353), Expect = 3e-32, Method: Composition-based stats. Identities = 39/166 (23%), Positives = 73/166 (43%), Gaps = 7/166 (4%) Query: 43 IFLTGQV--EDHMANLIVAQMLF--LEAENPEKDIYLYINSPGGVITAGMSIYDTMQFIK 98 IF+ G + + + + A L+ +I ++INS GG + G +IY+ ++ Sbjct: 20 IFIYGDIVSDKWFESDVTATDFKNKLDELGDISEIDVHINSSGGSVFEGHAIYNMLKMHP 79 Query: 99 PDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREILK 158 ++ AAS+ + + +G F NS +MIH G A ++ A + K Sbjct: 80 AKINIYVDALAASIASVIAMSG--DTIFMHKNSFLMIHNSWVMTVGNAEELRKTADLLEK 137 Query: 159 VKGRMNELMALHTG-QSLEQIERDTERDRFLSAPEAVEYGLVDSIL 203 N E +++ + + +L+A EA+ +GL+D IL Sbjct: 138 TDAVSNSAYLDKAKDLDQEHLKQMLDAETWLTAEEALSFGLIDEIL 183 >UniRef50_A1VPI3 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Polaromonas naphthalenivorans CJ2 RepID=A1VPI3_POLNA Length = 674 Score = 139 bits (352), Expect = 4e-32, Method: Composition-based stats. Identities = 41/164 (25%), Positives = 74/164 (45%), Gaps = 7/164 (4%) Query: 43 IFLTGQVEDHMANLIVAQMLF---LEAENPEKDIYLYINSPGGVITAGMSIYDTMQFIKP 99 I++ G + + V+ F L + I + INS GG + G++IY+ ++ K Sbjct: 30 IYIYGDIGESWYEETVSAATFVKELNDIDATA-ITVRINSIGGSVPDGLAIYNALRRHKA 88 Query: 100 DVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREILKV 159 +V+ G A S+ + + AG K N+ +MIH P G + ++ A ++ Sbjct: 89 EVTIEIDGMALSVASLIAMAG--DKVNMANNAMLMIHGPWSYVSGNSVELRDMADQLDTW 146 Query: 160 KGRMNELMALHTGQSLEQIERDTE-RDRFLSAPEAVEYGLVDSI 202 M+ A TG + T+ +D F +A +A+ VD+I Sbjct: 147 AAAMSNSYAARTGDQPAMLALLTDGKDHFYTAEQALAEKFVDAI 190 >UniRef50_B7HV38 ATP-dependent Clp protease proteolytic subunit n=11 Tax=root RepID=B7HV38_BACC7 Length = 248 Score = 139 bits (352), Expect = 4e-32, Method: Composition-based stats. Identities = 40/161 (24%), Positives = 75/161 (46%), Gaps = 6/161 (3%) Query: 45 LTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIYDTMQFIKPDVSTI 104 + G ++ A + ++ ++AE I+++INS GG G++I + ++ ++ Sbjct: 35 IGGWFSENNAEAVRRKIQDVKAEK----IHVHINSGGGSAFDGVAICNQLKQHNAEIIVH 90 Query: 105 CMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREILKVKGRMN 164 G AAS + + AG K N+ +MIHQ G A E AR++ K+ + Sbjct: 91 IDGWAASAASVIAMAG--DKIIMPSNTMMMIHQASTFEYGNADLFEKTARDLRKIDSALA 148 Query: 165 ELMALHTGQSLEQIERDTERDRFLSAPEAVEYGLVDSILTH 205 + E++++ + + +L+A EAV GL D I Sbjct: 149 ASYKKRFVGTDEELKQLLKDETWLTAEEAVALGLADEIADE 189 >UniRef50_B1BPQ5 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Clostridium perfringens E str. JGS1987 RepID=B1BPQ5_CLOPE Length = 672 Score = 139 bits (351), Expect = 5e-32, Method: Composition-based stats. Identities = 43/153 (28%), Positives = 70/153 (45%), Gaps = 7/153 (4%) Query: 55 NLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGA 114 + ++ Q+ +A N EK + + INSPGG I A IY ++ K ++ G AAS + Sbjct: 30 SKVINQI---KAANGEK-LTIKINSPGGDIFAASDIYTELREYKGEIEIKITGMAASAAS 85 Query: 115 FLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREILKVKGRMNELMALHTGQS 174 + AG K P +++M+H G G D+E A + + TG S Sbjct: 86 VIAMAG---KSSMSPTAQLMVHNVSTGTWGDYRDMEHTAEVLKNANDTIANAYMCKTGMS 142 Query: 175 LEQIERDTERDRFLSAPEAVEYGLVDSILTHRN 207 E+ + +LSA +A E G +D I+ + Sbjct: 143 REEALELMNNETYLSATKAKELGFIDEIMFEES 175 >UniRef50_B8DAG3 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Listeria monocytogenes HCC23 RepID=B8DAG3_LISMH Length = 276 Score = 139 bits (351), Expect = 6e-32, Method: Composition-based stats. Identities = 39/139 (28%), Positives = 65/139 (46%), Gaps = 2/139 (1%) Query: 64 LEAENPEKDIYLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKG 123 L+A IY+ INS GG + G +IY+ + + G AAS+ + + AG Sbjct: 49 LDALGDVSKIYVNINSNGGFVYEGQAIYNQLVRHPAQIHVRIDGMAASIASVIAMAGDII 108 Query: 124 KRFCLPNSRVMIHQPLGGYQGQATDIEIHAREILKVKGRMNELMALHTGQSLEQIERDTE 183 + N+++MIH+P GG G +D+E R + K + HT + +IE Sbjct: 109 EMPA--NAQMMIHEPAGGAFGNKSDLESAIRALDASKQSIIAAYRTHTTLEVSEIESMMA 166 Query: 184 RDRFLSAPEAVEYGLVDSI 202 ++++S EA E G + Sbjct: 167 EEKWMSGQEAYELGFATLV 185 >UniRef50_C3WVP2 ATP-dependent Clp protease proteolytic subunit n=2 Tax=Fusobacterium RepID=C3WVP2_9FUSO Length = 367 Score = 139 bits (351), Expect = 6e-32, Method: Composition-based stats. Identities = 36/148 (24%), Positives = 66/148 (44%), Gaps = 6/148 (4%) Query: 64 LEAENPEKDIYLYINSPGGVITAGMSIYDTMQFI----KPDVSTICMGQAASMGAFLLTA 119 L+ I L +NSPGG + +IY+ ++ ++ G AAS +FL+ Sbjct: 48 LQNYKNVSQINLRVNSPGGDVFEASAIYNLLKDFAKVNNIQITGYIDGLAASAASFLILC 107 Query: 120 GAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREILKVKGRMNELMALHTGQSLEQIE 179 + K + MIH PL G + +++ + VK + ++ + S E+I Sbjct: 108 AS--KIVMGIGALFMIHNPLTYAYGNSIELQKQIELLDTVKESILDIYCTKSKLSREEIA 165 Query: 180 RDTERDRFLSAPEAVEYGLVDSILTHRN 207 +++ A EA+E G +D I+ + N Sbjct: 166 EKMNNEKWFRANEALEAGFIDEIVENDN 193 >UniRef50_C4ML05 P05 n=1 Tax=Xanthomonas phage phiL7 RepID=C4ML05_9CAUD Length = 245 Score = 139 bits (351), Expect = 6e-32, Method: Composition-based stats. Identities = 47/170 (27%), Positives = 81/170 (47%), Gaps = 10/170 (5%) Query: 41 RVIFLTGQVEDH-----MANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIYDTMQ 95 R I + G++ + + ++QML + D+ + I+SPGG + AG++IY+ ++ Sbjct: 41 RAIDIFGEIGEDLYGEGTTSAQISQML---RDMGPGDVTVNIDSPGGDMFAGLAIYNQLR 97 Query: 96 FIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHARE 155 V+ +G AAS + + AG P + +MIHQ G + D A Sbjct: 98 AHDGVVTVNVVGTAASAASVIAMAGDVVN--MHPAAFIMIHQTWLLAAGNSRDFIALAEM 155 Query: 156 ILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEAVEYGLVDSILTH 205 + M E+ A TG+ L ++E+ + + +A EAV YGL D +L Sbjct: 156 LAPFDKAMAEIYASRTGKPLAEVEQLMAEETWFNAEEAVAYGLADKVLDP 205 >UniRef50_A1VKV0 ATP-dependent Clp protease proteolytic subunit n=2 Tax=Betaproteobacteria RepID=A1VKV0_POLNA Length = 641 Score = 139 bits (350), Expect = 7e-32, Method: Composition-based stats. Identities = 40/169 (23%), Positives = 78/169 (46%), Gaps = 8/169 (4%) Query: 38 LKERVIFLTGQVEDHM-ANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIYDTMQF 96 + I + ++ + A I +Q+ ++ + + + INS GG ++ ++IY+ ++ Sbjct: 1 MSTSKISIFSEIGSVVTAENIRSQLSYI---DDATPLIVEINSEGGSVSEAVAIYNLLRT 57 Query: 97 IKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREI 156 K V+ +G A S + AG + K S +M+H P G A + +A + Sbjct: 58 WKGGVTVEIVGWALSAATVIAMAGQRIKAHAT--SLIMVHAPWTNASGNAGAMRENAALL 115 Query: 157 LKVKGRMNELMALHTGQSLEQIERDTE-RDRFLSAPEAVEYGLVDSILT 204 +V M A T Q + + + +D + +A EA+ GLVD I++ Sbjct: 116 DQVALTMQAAYA-RTRQPAKTLAAWMDGQDHWFTAQEALALGLVDEIIS 163 >UniRef50_A6N1Z7 Clp protease n=1 Tax=Microbacterium phage Min1 RepID=A6N1Z7_9CAUD Length = 399 Score = 138 bits (349), Expect = 9e-32, Method: Composition-based stats. Identities = 40/159 (25%), Positives = 74/159 (46%), Gaps = 3/159 (1%) Query: 43 IFLTGQVEDHMANLIVAQMLFLEAENPE-KDIYLYINSPGGVITAGMSIYDTMQFIKPDV 101 +++ ++ + I + L E + ++ ++INSPGG G++I + ++ K V Sbjct: 32 VYIYDEIGESWWGGIAPKALVDEITALDVAEMTVHINSPGGAAWDGITIMNALRAHKAQV 91 Query: 102 STICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREILKVKG 161 + G AAS + + G +++MIH GG G A ++E A + K+ Sbjct: 92 HVVVDGLAASAASVIAMGG--DTITMNRGAQMMIHDASGGVWGNAAEVEAVATILHKLSD 149 Query: 162 RMNELMALHTGQSLEQIERDTERDRFLSAPEAVEYGLVD 200 + + A TG + EQ + + + +A EAV GL D Sbjct: 150 SIADTYAARTGGTREQWRAVMKDEAWYTAEEAVAAGLAD 188 >UniRef50_UPI0001B44862 Clp protease domain protein n=3 Tax=Listeria monocytogenes RepID=UPI0001B44862 Length = 265 Score = 138 bits (348), Expect = 1e-31, Method: Composition-based stats. Identities = 36/140 (25%), Positives = 67/140 (47%), Gaps = 2/140 (1%) Query: 68 NPEKDIYLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFC 127 N ++ ++INS GG + AG IY ++ +V +G AAS + + AG + Sbjct: 38 NASGEVEVWINSNGGDVFAGSEIYTALKSYNGNVVVKIVGMAASAASVIAMAG--NEVLI 95 Query: 128 LPNSRVMIHQPLGGYQGQATDIEIHAREILKVKGRMNELMALHTGQSLEQIERDTERDRF 187 P ++MIH G +G +++ + + L TG++LE++ + + Sbjct: 96 SPTGQMMIHNVQYGGRGDYRELKKASEIAQNANISIANAYQLKTGKTLEELLNMMGEETW 155 Query: 188 LSAPEAVEYGLVDSILTHRN 207 L++ +AVE GL D ++ N Sbjct: 156 LNSQQAVELGLADGVMFQEN 175 >UniRef50_A8GLM2 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Serratia proteamaculans 568 RepID=A8GLM2_SERP5 Length = 365 Score = 138 bits (348), Expect = 1e-31, Method: Composition-based stats. Identities = 36/157 (22%), Positives = 70/157 (44%), Gaps = 8/157 (5%) Query: 47 GQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIYDTMQFIKPDVSTICM 106 G+ +D + + Q+ + K+I++ INS GG + +I T++ V+ Sbjct: 31 GEWDDVNSRDVATQLKAV----TSKEIHVKINSYGGSVFTAQAILSTLKRHTAAVTVFID 86 Query: 107 GQAASMGAFLLTAGAKGKRFCLP-NSRVMIHQPLGGYQGQATDIEIHAREILKVKGRMNE 165 G + G+R +P N+ +MIH PL G A D +A + +++ + Sbjct: 87 GI---AASAATIIAMAGERVVIPSNAMMMIHNPLTWADGNAADFREYADMLDRIRDSIIA 143 Query: 166 LMALHTGQSLEQIERDTERDRFLSAPEAVEYGLVDSI 202 T + E++ + + ++SA EAV+ G D + Sbjct: 144 AYQSKTSLTHEKLVELMDAETWMSATEAVDLGFADEV 180 >UniRef50_C7Q187 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Catenulispora acidiphila DSM 44928 RepID=C7Q187_CATAD Length = 564 Score = 138 bits (347), Expect = 1e-31, Method: Composition-based stats. Identities = 38/145 (26%), Positives = 66/145 (45%), Gaps = 3/145 (2%) Query: 57 IVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFL 116 + AQ E + + I L++NSPGG + G++I+ + + V+T AAS+ + + Sbjct: 46 VTAQDFIDEMKQVDGPIDLHLNSPGGEVWDGIAIHAYLSG-RGGVTTYVDALAASIASVI 104 Query: 117 LTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREILKVKGRMNELMALHTGQSLE 176 AG + N+ +MIH G G A D+ A + +V + + A TG+ + Sbjct: 105 AMAGE--QIVMGRNASLMIHDGWGLVIGNAADMREQAELLDRVSDNIASIYADRTGKPKD 162 Query: 177 QIERDTERDRFLSAPEAVEYGLVDS 201 + + EAV+ GL D Sbjct: 163 DWRAAMLAETWYIGQEAVDAGLADR 187 >UniRef50_D0J499 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Comamonas testosteroni CNB-2 RepID=D0J499_COMTE Length = 697 Score = 138 bits (347), Expect = 2e-31, Method: Composition-based stats. Identities = 39/171 (22%), Positives = 73/171 (42%), Gaps = 13/171 (7%) Query: 43 IFLTGQVEDHM------ANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIYDTMQF 96 I + G + + A +A++ L+ + I + INS GG + G++IY+ M+ Sbjct: 30 ILIYGDIGESWWDETTSAKSFLAELSALDVDA----ITVRINSLGGSVPDGIAIYNAMKR 85 Query: 97 IKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREI 156 K ++ G A S+ + + G N+ +MIH P G + ++ A ++ Sbjct: 86 HKATITVEVDGIAYSIASLIAMGG--DTVNMASNALMMIHAPWTYAAGNSAELRELADQL 143 Query: 157 LKVKGRMNELMALHTGQSLEQIERDTE-RDRFLSAPEAVEYGLVDSILTHR 206 M+ A TG + T+ +D F +A EA+ +D+I Sbjct: 144 DTWANAMSTSYAAKTGDQAGALALLTDGKDHFFTAEEALALKFIDAITDSN 194 >UniRef50_UPI0001B43327 serine protease n=1 Tax=Listeria monocytogenes FSL N1-017 RepID=UPI0001B43327 Length = 235 Score = 137 bits (346), Expect = 2e-31, Method: Composition-based stats. Identities = 45/178 (25%), Positives = 78/178 (43%), Gaps = 14/178 (7%) Query: 39 KERVIFLTGQV-------EDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIY 91 E I++ G++ ED A+ + L + I L++NSPGG + G++I Sbjct: 14 NEAEIYIYGEIVSFKWDEEDTTASSFQKDLKELGNI---ETINLHVNSPGGNVFEGIAIS 70 Query: 92 DTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEI 151 + ++ K V AAS+ + ++ K NS MIH P G +T++ Sbjct: 71 NMIKAHKAKVIAYVDALAASIASVIVAGA--DKVVMYENSMQMIHNPTWNVSGNSTELRK 128 Query: 152 HAREILKVKGRMNELMALHTG--QSLEQIERDTERDRFLSAPEAVEYGLVDSILTHRN 207 HA ++ + G S E+I++ + +LSA +A+ +GL D IL Sbjct: 129 HADDLDAIAQASVLTYLSKAGDKLSEEKIKQIMAEETWLSAKDALGHGLCDEILEANK 186 >UniRef50_Q892G9 ATP-dependent Clp protease proteolytic subunit n=2 Tax=root RepID=Q892G9_CLOTE Length = 226 Score = 137 bits (345), Expect = 3e-31, Method: Composition-based stats. Identities = 37/140 (26%), Positives = 66/140 (47%), Gaps = 2/140 (1%) Query: 64 LEAENPEKDIYLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKG 123 L + + + INS GG + AG IY ++ K +V+ +G AAS + + AG Sbjct: 35 LSNSKNNEGLEVEINSGGGSVFAGSEIYTLLKDYKGNVTVKIVGLAASAASVIAMAG--D 92 Query: 124 KRFCLPNSRVMIHQPLGGYQGQATDIEIHAREILKVKGRMNELMALHTGQSLEQIERDTE 183 K P ++MIH G + G ++E + + V ++ L TG S E++ Sbjct: 93 KVLISPTGQIMIHNASGCFSGDYRNMEKGSEILKNVNITISNAYKLKTGLSSEELLDMMN 152 Query: 184 RDRFLSAPEAVEYGLVDSIL 203 ++ +L+ A++ VD I+ Sbjct: 153 KETWLTPQNALDNKFVDEIM 172 >UniRef50_B7IY99 ATP-dependent Clp protease proteolytic subunit n=16 Tax=Bacillus cereus group RepID=B7IY99_BACC2 Length = 260 Score = 136 bits (344), Expect = 3e-31, Method: Composition-based stats. Identities = 36/144 (25%), Positives = 63/144 (43%), Gaps = 3/144 (2%) Query: 64 LEAENPEKDIYLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKG 123 LE N + D+ + INSPGG + G IY ++ V +G AAS + + A K Sbjct: 37 LEDANGD-DLVVSINSPGGYVHEGSEIYTALKNYPGHVEVQIVGLAASAASVIAMAADKV 95 Query: 124 KRFCLPNSRVMIHQPLGGYQGQATDIEIHAREILKVKGRMNELMALHTGQSLEQIERDTE 183 + P +++MIH G D+ A + + + +G+S E++ Sbjct: 96 R--ISPTAQIMIHNASMWNGGDHRDMSKAAEMLKTTDRAIVNAYVIKSGKSEEELLNMMA 153 Query: 184 RDRFLSAPEAVEYGLVDSILTHRN 207 + ++ +A+E VD I+ N Sbjct: 154 EETWMGPQQALENNFVDEIMFMDN 177 >UniRef50_Q72BY3 ClpP protease family protein n=2 Tax=Desulfovibrio vulgaris RepID=Q72BY3_DESVH Length = 244 Score = 136 bits (343), Expect = 4e-31, Method: Composition-based stats. Identities = 45/173 (26%), Positives = 75/173 (43%), Gaps = 12/173 (6%) Query: 39 KERVIFLTGQV--EDHM----ANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIYD 92 +E I+L + +D+ A V ++ + A I+L INSPGG + A + Sbjct: 27 EEATIYLYDVIVTDDYWGGVSAEAFVRELNAITAS----TIHLRINSPGGEVFAARCMEA 82 Query: 93 TMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIH 152 ++ V G AAS +F+ A P + +MIH+ G + D+ Sbjct: 83 AIKGHPAKVIAHVDGYAASAASFVAIAC--DDVLMAPGAFMMIHKAWVFTAGNSDDLIQT 140 Query: 153 AREILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEAVEYGLVDSILTH 205 A + K+ G + E + G+S+ + + + +A EAVE GL DSI Sbjct: 141 ASLLEKLDGTLAETYSQKCGKSVSDMAEMMAAETWFTAQEAVEAGLADSIEES 193 >UniRef50_B8ILU4 ATP-dependent Clp protease proteolytic subunit n=2 Tax=Proteobacteria RepID=B8ILU4_METNO Length = 237 Score = 136 bits (343), Expect = 5e-31, Method: Composition-based stats. Identities = 42/148 (28%), Positives = 68/148 (45%), Gaps = 6/148 (4%) Query: 54 ANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMG 113 A V ++ +EA I+L +NSPGG + A ++ ++ K V G AAS Sbjct: 46 AQTFVRELAAIEA----GTIHLRLNSPGGDVFAARAMKTALEQHKAKVVAHIDGVAASAA 101 Query: 114 AFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREILKVKGRMNELMALHTGQ 173 +FL+ A + + VMIH+P G A ++ A + KV + TG+ Sbjct: 102 SFLMLAA--DEIAIADGAFVMIHEPWSLALGTADEMRASADLLDKVGEAIAADYQRRTGK 159 Query: 174 SLEQIERDTERDRFLSAPEAVEYGLVDS 201 S E++ + + + SA EA+E G D Sbjct: 160 SAEEVAAWMKAETWFSADEAIENGFADR 187 >UniRef50_B3EUB4 Peptidase S14 ClpP n=1 Tax=Candidatus Amoebophilus asiaticus 5a2 RepID=B3EUB4_AMOA5 Length = 455 Score = 136 bits (342), Expect = 6e-31, Method: Composition-based stats. Identities = 48/179 (26%), Positives = 84/179 (46%), Gaps = 8/179 (4%) Query: 35 SRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYI-NSPGGVITAGMSIYDT 93 + +L +R + L G V AN I ++ + ++ K I++ I NSPGG AG+ I Sbjct: 217 TLVLSDRAVSLDGVVTSWKANYITDRIKYFNNKDKTKPIFIVIENSPGGSALAGLHIVQA 276 Query: 94 MQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHA 153 MQ + V + AASM A + T K + PN+ ++ HQP G +++ Sbjct: 277 MQNSQAPVYVVLKTFAASMAALITTLAKKS--YAYPNAILLHHQPWSFTGGNLRELKEEI 334 Query: 154 REILKVKGRMNELMALHTGQSLEQI-----ERDTERDRFLSAPEAVEYGLVDSILTHRN 207 + ++ R+ +A G SL+++ E+ + D A A + VD ++T+ N Sbjct: 335 EFMKELWKRLGGQVAKKMGISLDKLDKQLYEKASRGDWTEFADNAKKIKWVDHVITNIN 393 >UniRef50_A7GI71 ATP-dependent Clp protease proteolytic subunit n=15 Tax=Firmicutes RepID=A7GI71_CLOBL Length = 266 Score = 135 bits (341), Expect = 7e-31, Method: Composition-based stats. Identities = 33/136 (24%), Positives = 67/136 (49%), Gaps = 4/136 (2%) Query: 63 FLEAENPEKDIYLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAK 122 FL+ + K++ +YINS GG + AG++IY ++ + G AAS+ + + G Sbjct: 62 FLKEIDNNKELDIYINSGGGSVFAGLAIYHQLKRHNGFKTVHVDGLAASITSVIALVG-- 119 Query: 123 GKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREILKVKGRMNELMA--LHTGQSLEQIER 180 K ++ MIH+P G A + A ++ + + ++ L+ G ++E I++ Sbjct: 120 DKVVIPAPAQFMIHKPWTIALGNANEFRKQANDLDIAEESILKIYEANLNEGVNIETIKQ 179 Query: 181 DTERDRFLSAPEAVEY 196 + +++ +A EY Sbjct: 180 LMADETWMTGEKAAEY 195 >UniRef50_Q2VPY9 ATP-dependent Clp protease proteolytic subunit (Fragment) n=1 Tax=Bifidobacterium pullorum RepID=Q2VPY9_9BIFI Length = 161 Score = 135 bits (341), Expect = 7e-31, Method: Composition-based stats. Identities = 69/129 (53%), Positives = 95/129 (73%), Gaps = 1/129 (0%) Query: 8 DNFAPH-MALVPMVIEQTSRGERSFDIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEA 66 FAP ++P E+T G + D Y+RL ++R+IF+ QV+D A+ I+AQ+L LE+ Sbjct: 32 ARFAPQDRYILPQFEEKTPYGYKRQDPYTRLFEDRIIFMGVQVDDAAADDIMAQLLVLES 91 Query: 67 ENPEKDIYLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRF 126 ++P +D+ +YINSPGG +TA +IYDTMQ+IKPDV T+C+GQAAS A LL AGAKGKR Sbjct: 92 QDPNRDVMMYINSPGGSMTAMTAIYDTMQYIKPDVQTVCLGQAASAAAILLAAGAKGKRL 151 Query: 127 CLPNSRVMI 135 LPN+RV+I Sbjct: 152 ILPNARVLI 160 >UniRef50_P42380 ATP-dependent Clp protease proteolytic subunit n=6 Tax=Chlorophyceae RepID=CLPP_CHLRE Length = 524 Score = 135 bits (341), Expect = 7e-31, Method: Composition-based stats. Identities = 55/139 (39%), Positives = 85/139 (61%) Query: 67 ENPEKDIYLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRF 126 E K +++ INS GG + G++++D +QFIK T+ +G AAS + L G G+R+ Sbjct: 343 EEESKKVFMIINSFGGSVGNGITVHDALQFIKAGSLTLALGVAASAASLALAGGTIGERY 402 Query: 127 CLPNSRVMIHQPLGGYQGQATDIEIHAREILKVKGRMNELMALHTGQSLEQIERDTERDR 186 MIHQP GG GQA+DI I ++EI+K++ + E+ +L T + +I RD +RD Sbjct: 403 VTEGCHTMIHQPEGGLNGQASDIWIDSQEIMKIRLDVAEIYSLSTYRPRHKILRDLDRDF 462 Query: 187 FLSAPEAVEYGLVDSILTH 205 +L+A E + YGL D I T+ Sbjct: 463 YLTAMETIYYGLADEIATN 481 Score = 43.6 bits (102), Expect = 0.004, Method: Composition-based stats. Identities = 13/56 (23%), Positives = 27/56 (48%), Gaps = 2/56 (3%) Query: 17 VPMVIE--QTSRGERSFDIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPE 70 VP +I + DIY+ + + R++FL ++D + N I ++ + E+ Sbjct: 5 VPRIIYCWGEELPAQWTDIYNFIFRRRMVFLMQYLDDELCNQICGLLINIHMEDRS 60 >UniRef50_B2V4L4 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Clostridium botulinum E3 str. Alaska E43 RepID=B2V4L4_CLOBA Length = 263 Score = 135 bits (341), Expect = 7e-31, Method: Composition-based stats. Identities = 34/135 (25%), Positives = 64/135 (47%), Gaps = 4/135 (2%) Query: 73 IYLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSR 132 I +++NS GG + M+I + + +++ I G AAS +F+LT K N+ Sbjct: 60 INVFVNSYGGSVYEAMAIRNQLMRHSANITGIVDGFAASAASFILTGCNYVK--MYSNTM 117 Query: 133 VMIHQPLGGYQGQATDIEIHAREILKVKGRMNELMALHT-GQSLEQI-ERDTERDRFLSA 190 MIH G A ++ A ++ K+ + + G+ E+I E + +L+A Sbjct: 118 QMIHNMWMPACGNANELRKSADDLDKIMEGNRQAYLQKSNGKLTEEILIELLENETWLTA 177 Query: 191 PEAVEYGLVDSILTH 205 + ++YGL D ++ Sbjct: 178 EDCLKYGLCDEVIEE 192 >UniRef50_B1MZD0 ATP-dependent Clp protease proteolytic subunit n=4 Tax=root RepID=B1MZD0_LEUCK Length = 229 Score = 135 bits (341), Expect = 8e-31, Method: Composition-based stats. Identities = 33/133 (24%), Positives = 64/133 (48%), Gaps = 2/133 (1%) Query: 72 DIYLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNS 131 D+ + INS GG + A IY ++ V T A S + + AG K P + Sbjct: 42 DLEIGINSGGGEVDAANEIYTALRNYPGKVITQIESSAYSAASIIAMAG--DKVQISPVA 99 Query: 132 RVMIHQPLGGYQGQATDIEIHAREILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAP 191 ++MIH G D++ + + + + ++ TG+ +E+ +++ +++A Sbjct: 100 QLMIHNASTYAGGNHNDLDKTSNALKSTDKAIAKAYSVKTGRPVEEFLALMDKETWINAD 159 Query: 192 EAVEYGLVDSILT 204 +A+E GLVD ++T Sbjct: 160 DALELGLVDEVMT 172 >UniRef50_Q3RAG5 ATP-dependent Clp protease proteolytic subunit n=4 Tax=Xylella fastidiosa RepID=Q3RAG5_XYLFA Length = 771 Score = 135 bits (341), Expect = 8e-31, Method: Composition-based stats. Identities = 47/171 (27%), Positives = 77/171 (45%), Gaps = 17/171 (9%) Query: 43 IFLTGQVEDH------MANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIYDTMQF 96 + L G + D A ++AQ+ + I++ INS GGV++ G++IY+ + Sbjct: 45 LLLYGPIGDDFWEEGVTAASLIAQL----STVTAPLIHVRINSNGGVVSDGLAIYNALTA 100 Query: 97 IKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREI 156 + G AAS+ + + AG R PNS +MIH P G A D+ A + Sbjct: 101 HPATIHVTIDGVAASIASLIAQAGT--TRRVYPNSLMMIHGPQTSGWGFAEDLRHTAAML 158 Query: 157 LKVKGRMNELMALHTGQS-LEQIERDTE--RDRFLSAPEAVEYGLVDSILT 204 + M+ TG + E I R D +L+A + + GL D+I+ Sbjct: 159 DTMAAAMHTAYT--TGATHPEAIRRMLNDGHDHWLTAQDMIAAGLADTIID 207 >UniRef50_A3F644 Head maturation protease n=3 Tax=root RepID=A3F644_9CAUD Length = 268 Score = 135 bits (340), Expect = 9e-31, Method: Composition-based stats. Identities = 38/143 (26%), Positives = 68/143 (47%), Gaps = 3/143 (2%) Query: 63 FLEAENPEKDIYLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAK 122 FL++ E DI + +NS GG + G IY ++ +V + G AAS+ + ++ AG Sbjct: 35 FLDSAGGE-DIQVRLNSGGGEVFVGSEIYSALKDYPGNVEVVITGLAASIASIIMLAGDV 93 Query: 123 GKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREILKVKGRMNELMALHTGQSLEQIERDT 182 K P +++MIH G G ++ + + + + A TG+ +I Sbjct: 94 IK--ASPMAQIMIHNASWGSYGDYRQLKHDSEVVENASISLAGMYARKTGKQETEIRELL 151 Query: 183 ERDRFLSAPEAVEYGLVDSILTH 205 + + + +A A E GL+D IL + Sbjct: 152 DAETWFTANSAKEIGLIDDILYN 174 >UniRef50_C7D0Z8 ATP-dependent Clp protease proteolytic subunit n=6 Tax=Enterococcus RepID=C7D0Z8_ENTFA Length = 253 Score = 134 bits (339), Expect = 1e-30, Method: Composition-based stats. Identities = 36/136 (26%), Positives = 63/136 (46%), Gaps = 3/136 (2%) Query: 68 NPEKDIYLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFC 127 N +D+ + INS GG++ G IY ++ + V + A S + + AG Sbjct: 38 NHNEDVEVTINSYGGLVDMGNEIYTALRSYEGHVKVNVV-MAGSAASIIAMAG--NTVAI 94 Query: 128 LPNSRVMIHQPLGGYQGQATDIEIHAREILKVKGRMNELMALHTGQSLEQIERDTERDRF 187 P ++MIH G G ++ + + K + TG++ E+I +++ + Sbjct: 95 SPVGQIMIHNVAMGAGGDYHTMDKASEILQKANNSLANAYVSKTGKAKEEILALMDKETW 154 Query: 188 LSAPEAVEYGLVDSIL 203 L+A EAVE G VD I+ Sbjct: 155 LTAEEAVENGFVDEIM 170 >UniRef50_UPI0001C37221 ATP-dependent Clp protease, proteolytic subunit ClpP, putative n=1 Tax=Ruminococcus flavefaciens FD-1 RepID=UPI0001C37221 Length = 306 Score = 134 bits (339), Expect = 1e-30, Method: Composition-based stats. Identities = 48/177 (27%), Positives = 78/177 (44%), Gaps = 4/177 (2%) Query: 29 RSFDIYSRLLKERVIFLTGQVEDH--MANLIVAQMLFLEAENPEKDIYLYINSPGGVITA 86 + +D RV+ L G ++ + I Q E + D+ L+INSPGG + A Sbjct: 3 KFWDYIHDDSGGRVLRLEGPIDSDSFWGDEITPQDFRDELYAEDGDLTLWINSPGGNVFA 62 Query: 87 GMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQA 146 IY ++ +V+ AAS + + AG P + +MI+ P G A Sbjct: 63 AAEIYTMIRDYPHNVTVRIASIAASAASVIAMAG--NTVQMSPTALLMINDPSTIAFGNA 120 Query: 147 TDIEIHAREILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEAVEYGLVDSIL 203 D+E + +VK + A TG S +I + + +++A +AVE G D IL Sbjct: 121 KDMEKAIATLNEVKESIINAYAAKTGLSRNRISKLMSDETWINAKKAVELGFADEIL 177 >UniRef50_A8SI37 Putative uncharacterized protein n=1 Tax=Parvimonas micra ATCC 33270 RepID=A8SI37_9FIRM Length = 170 Score = 134 bits (339), Expect = 1e-30, Method: Composition-based stats. Identities = 32/123 (26%), Positives = 58/123 (47%), Gaps = 4/123 (3%) Query: 84 ITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQ 143 + G++I + ++ K V+ G AAS+ + + +G F N+ +M+H P Sbjct: 1 MFDGIAIGNMIKQHKAQVNCYIDGVAASIASVIAMSGDA--IFMPSNAMLMVHNPWSFAY 58 Query: 144 GQATDIEIHAREILKVKGRMNELMALHTG--QSLEQIERDTERDRFLSAPEAVEYGLVDS 201 G A+D A + + + + G LE I + + + ++SA EA EYGL D Sbjct: 59 GNASDFRKQADNLDHIADSIKQTYLEKAGDKLDLETITQLMDAETWMSAQEAFEYGLCDQ 118 Query: 202 ILT 204 +L+ Sbjct: 119 VLS 121 >UniRef50_UPI0001B52F96 putative Clp protease n=1 Tax=Fusobacterium sp. D11 RepID=UPI0001B52F96 Length = 370 Score = 134 bits (338), Expect = 2e-30, Method: Composition-based stats. Identities = 39/176 (22%), Positives = 74/176 (42%), Gaps = 9/176 (5%) Query: 36 RLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIYDTMQ 95 R+ + + + + ++ L+ + I L +NSPGG + +IY+ ++ Sbjct: 23 RIYGTITKWAWEEYGEVSSANFAKELQKLKNISH---INLRVNSPGGDVFEASAIYNLLK 79 Query: 96 FI----KPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEI 151 +++ G AAS +FL+ K + MIH PL G A ++ Sbjct: 80 DYAKVNNIEITGYIDGLAASAASFLVLCAT--KVIMGTGALYMIHNPLTSAYGNAEKLKK 137 Query: 152 HAREILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEAVEYGLVDSILTHRN 207 + VK + ++ + S E+I +++ A EA+E G VD I+ + N Sbjct: 138 QIELLDTVKEAILDIYCTKSKLSREEISEKMNGEKWYRASEALEAGFVDEIVENDN 193 >UniRef50_B9QT01 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Labrenzia alexandrii DFL-11 RepID=B9QT01_9RHOB Length = 342 Score = 134 bits (337), Expect = 2e-30, Method: Composition-based stats. Identities = 37/160 (23%), Positives = 67/160 (41%), Gaps = 7/160 (4%) Query: 44 FLTGQVEDH--MANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIYDTMQFIKPDV 101 F+ + D A ++ L + D+ + +NS GG + G SIY+ ++ DV Sbjct: 14 FVGENLWDEGFTAREVIT---ALAEHGSQNDLTVRLNSGGGYVDDGRSIYNALKVHGGDV 70 Query: 102 STICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREILKVKG 161 + G AAS + + AG K + +MIH P G A D ++ + + + Sbjct: 71 TVFVDGVAASSASLIAMAG--DKIVMRSGALMMIHDPATITVGTADDHDVSKQALERTAE 128 Query: 162 RMNELMALHTGQSLEQIERDTERDRFLSAPEAVEYGLVDS 201 + A +G + + + +++A EAV G D Sbjct: 129 SFADTYAARSGNDAKDVRAAMKATTWMTADEAVAAGYADE 168 >UniRef50_A3X5R0 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Roseobacter sp. MED193 RepID=A3X5R0_9RHOB Length = 326 Score = 134 bits (337), Expect = 2e-30, Method: Composition-based stats. Identities = 38/137 (27%), Positives = 68/137 (49%), Gaps = 2/137 (1%) Query: 69 PEKDIYLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCL 128 + I L +NSPGG + ++IY+ ++ +++ G AAS +++ AG Sbjct: 41 EDAAIDLRLNSPGGSVFDAVAIYNALKRHAGEITVWIDGIAASAASYIAMAGDA--IVMP 98 Query: 129 PNSRVMIHQPLGGYQGQATDIEIHAREILKVKGRMNELMALHTGQSLEQIERDTERDRFL 188 N+ +MIH P G G A D+ A + KVKG + + A +G+ ++I + +L Sbjct: 99 ENAFLMIHDPSGLVMGTAEDMRATAEALDKVKGSLIQGYAGKSGKPDDEIAALMAAETWL 158 Query: 189 SAPEAVEYGLVDSILTH 205 A +A++ G +D I Sbjct: 159 DAKDALDLGFIDRIAEP 175 >UniRef50_A5ZPL9 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Ruminococcus obeum ATCC 29174 RepID=A5ZPL9_9FIRM Length = 223 Score = 133 bits (336), Expect = 3e-30, Method: Composition-based stats. Identities = 37/144 (25%), Positives = 73/144 (50%), Gaps = 5/144 (3%) Query: 64 LEAENPEKDIYLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKG 123 L + +++I + +NS GG + AG IY ++ K +V A S + AG Sbjct: 36 LNSAAVDEEIEVLVNSGGGSVMAGQEIYSALKQKK-NVVIKIQSMAGSAAGVIAMAG--- 91 Query: 124 KRFCLPNSRVMIHQP-LGGYQGQATDIEIHAREILKVKGRMNELMALHTGQSLEQIERDT 182 K P + +MIH + G G D++ +A + ++ + +G+SL++I + Sbjct: 92 KCQMSPVAMIMIHNVSMSGASGDYHDMQKNAEILKQMNSALAAAYTEKSGRSLDEILKLM 151 Query: 183 ERDRFLSAPEAVEYGLVDSILTHR 206 +R+ +L+A + ++YG VD I++ + Sbjct: 152 DRETWLTANQCLDYGFVDEIMSEQ 175 >UniRef50_A9C2D1 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Delftia acidovorans SPH-1 RepID=A9C2D1_DELAS Length = 345 Score = 133 bits (335), Expect = 4e-30, Method: Composition-based stats. Identities = 46/166 (27%), Positives = 76/166 (45%), Gaps = 16/166 (9%) Query: 49 VEDHM------ANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIYDTMQFIKPD-- 100 ++D + A Q+ N DI + +N+PGG + AG+ I++ ++ Sbjct: 20 IDDEIGFWGTQAKDFRDQL-----ANVAGDIDVELNTPGGDVFAGLGIFNMLRAHAAKGF 74 Query: 101 -VSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREILKV 159 V+T MG AAS+G+ LL AG KR N+ M H G G A ++ HA + KV Sbjct: 75 QVTTRVMGVAASIGSVLLLAG--DKREMPKNTMAMTHNVASGIWGTADELRDHADTMDKV 132 Query: 160 KGRMNELMALHTGQSLEQIERDTERDRFLSAPEAVEYGLVDSILTH 205 KG++ + G + +D +++A EA+ G +L Sbjct: 133 KGQLRGIYVDRLGVDEATADAMLGKDNWMTADEALATGFATDLLAE 178 >UniRef50_D0DKS7 ATP-dependent Clp protease proteolytic subunit n=6 Tax=root RepID=D0DKS7_9LACO Length = 241 Score = 133 bits (335), Expect = 4e-30, Method: Composition-based stats. Identities = 39/142 (27%), Positives = 71/142 (50%), Gaps = 2/142 (1%) Query: 66 AENPEKDIYLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKR 125 + +DI L INSPGG I AG +Y ++ +V+ +GQA S +++ A K + Sbjct: 43 NDANGQDITLEINSPGGYIDAGSEMYTDLKKYPGNVTAQVVGQACSAASWIALAADKVE- 101 Query: 126 FCLPNSRVMIHQPLGGYQGQATDIEIHAREILKVKGRMNELMALHTGQSLEQIERDTERD 185 P +++MIH+ G +G D+ + + + +L + TG ++I R Sbjct: 102 -MSPTAQMMIHRVSVGVEGNVDDLTSALQSLDSMDQTYVDLYSKRTGLDKQEIYRMMCAT 160 Query: 186 RFLSAPEAVEYGLVDSILTHRN 207 +++A +AV+ G DSI+ + Sbjct: 161 TWMNAKQAVDKGFADSIMFEND 182 >UniRef50_B7JPB9 ATP-dependent Clp protease proteolytic subunit n=6 Tax=root RepID=B7JPB9_BACC0 Length = 247 Score = 133 bits (334), Expect = 5e-30, Method: Composition-based stats. Identities = 30/132 (22%), Positives = 54/132 (40%), Gaps = 2/132 (1%) Query: 71 KDIYLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPN 130 K I ++INS GG + ++I + ++ + G AAS + + A K N Sbjct: 56 KTINVHINSGGGDVFESIAISNLLKNHSATIVVHIDGLAASGASVIAMAA--DKIVMPKN 113 Query: 131 SRVMIHQPLGGYQGQATDIEIHAREILKVKGRMNELMALHTGQSLEQIERDTERDRFLSA 190 + +MIH+ G A + A + K+ + E ++E + +L+A Sbjct: 114 TMMMIHKAWTYAAGNAEGLRKVADRLDKIDNAVTESYTSRFVGEKSELESLLAEETWLTA 173 Query: 191 PEAVEYGLVDSI 202 E +G D I Sbjct: 174 EECKTFGFCDEI 185 >UniRef50_Q3EL78 ATP-dependent Clp protease proteolytic subunit n=3 Tax=Bacillus cereus group RepID=Q3EL78_BACTI Length = 244 Score = 132 bits (333), Expect = 7e-30, Method: Composition-based stats. Identities = 33/148 (22%), Positives = 71/148 (47%), Gaps = 10/148 (6%) Query: 51 DHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAA 110 I+ Q+ + + ++ +Y+NS GG + AG++IY+ ++ K + G AA Sbjct: 49 PDDVKNILGQL------DDKSNLNIYVNSGGGSVFAGLAIYNMLKRNKAQKTVYVDGVAA 102 Query: 111 SMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREILKVKGRMNELMAL- 169 S+ + + AG + N+ +M+H+P +G A + A ++ ++ + + Sbjct: 103 SIASVIALAG--DRVVVPSNAFLMVHKPWTVSRGNANVLRKMAEDLDNLEAGIMNVYKEN 160 Query: 170 -HTGQSLEQIERDTERDRFLSAPEAVEY 196 G +E I++ + + +LS EA +Y Sbjct: 161 LKEGIEMEVIQQLVDAETWLSGEEAEKY 188 >UniRef50_B8D1N4 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Halothermothrix orenii H 168 RepID=B8D1N4_HALOH Length = 234 Score = 132 bits (332), Expect = 9e-30, Method: Composition-based stats. Identities = 43/170 (25%), Positives = 83/170 (48%), Gaps = 8/170 (4%) Query: 43 IFLTGQVEDHMANLIVAQMLFLEAENPE------KDIYLYINSPGGVITAGMSIYDTMQF 96 I+L G + + + + ++ L+ + I +++NS GG + ++I++ + Sbjct: 20 IYLHGPIRNPLPDEDEEDVITLKEVRNKLNKITADKIIVHLNSTGGDLFQSVAIHNLFKD 79 Query: 97 IKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREI 156 K ++ I G AAS G+ +L AG K K + PNS +MIH G A AR++ Sbjct: 80 HKAEIIMINDGIAASGGSIILMAGDKIKFY--PNSIMMIHAAHTITYGDAKYHREVARKL 137 Query: 157 LKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEAVEYGLVDSILTHR 206 K+ + E + + +++E+ + + +L+A EA E G D I++ Sbjct: 138 DKIDKSLKENYSQRFTGAEKELEKLIQEETWLTAKEAKEKGFCDEIISDN 187 >UniRef50_Q50DZ1 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Clostridium hathewayi RepID=Q50DZ1_9CLOT Length = 139 Score = 131 bits (331), Expect = 1e-29, Method: Composition-based stats. Identities = 63/104 (60%), Positives = 82/104 (78%), Gaps = 2/104 (1%) Query: 14 MALVPMVIEQTSRGERSFDIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDI 73 M+LVP VIE TS+GERS+D++SRLLK+R+IFL +V D A L VAQMLFLEAE+P KDI Sbjct: 1 MSLVPNVIETTSKGERSYDLFSRLLKDRIIFLGEEVNDETARLAVAQMLFLEAEDPSKDI 60 Query: 74 YLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLL 117 YINSPGG ITAG++IYDTM++I+ V+ + +AA++ LL Sbjct: 61 SFYINSPGGSITAGLAIYDTMRYIR--VTYRHLYRAAAVSRILL 102 >UniRef50_A7FXQ7 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Clostridium botulinum A str. ATCC 19397 RepID=A7FXQ7_CLOB1 Length = 247 Score = 131 bits (331), Expect = 1e-29, Method: Composition-based stats. Identities = 35/164 (21%), Positives = 69/164 (42%), Gaps = 5/164 (3%) Query: 41 RVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIYDTMQFIKPD 100 R + +D ++ V L A+ +KD+ ++INS GG + ++I + ++ + Sbjct: 33 RKGYWWDDEDDCISAKRVKNAL---ADLRDKDVNIHINSGGGDVFESIAICNLLKQHGGN 89 Query: 101 VSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREILKVK 160 ++ AAS + + A K NS +MIH+ G A D+ A ++ K+ Sbjct: 90 ITITIDALAASGASVICMAA--NKIVMPKNSMMMIHKAWTWTDGNADDLRKVAADLDKMD 147 Query: 161 GRMNELMALHTGQSLEQIERDTERDRFLSAPEAVEYGLVDSILT 204 + + E+++ + + +A E G D IL Sbjct: 148 SAVLASYKDRFIGTEEELKALIKESSWFTAEECKSLGFCDEILD 191 >UniRef50_B8L012 Peptidase S14, ClpP n=1 Tax=Stenotrophomonas sp. SKA14 RepID=B8L012_9GAMM Length = 245 Score = 131 bits (330), Expect = 1e-29, Method: Composition-based stats. Identities = 41/167 (24%), Positives = 66/167 (39%), Gaps = 4/167 (2%) Query: 39 KERVIFLTGQVEDHMANLIVAQMLFLEAENPEKD-IYLYINSPGGVITAGMSIYDTMQFI 97 KE I+L G + + I M + D I+L I+SPGG + A S+ + Sbjct: 27 KEATIYLHGVIGGWWGD-IDETMFAQAMAGIDADVIHLRIDSPGGDVFAARSMMTAIAQH 85 Query: 98 KPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREIL 157 K V G AAS + A K + + MIH G D+ + Sbjct: 86 KATVIAHIDGLAASAMTGVCMACDKVE--ISQGAGFMIHNAWTITVGNKADMIKTGELLA 143 Query: 158 KVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEAVEYGLVDSILT 204 K+ + TG+ QI + + + + +A EA E+G D ++ Sbjct: 144 KIDAGLAGDYTRRTGKDQSQIVQWMDEETWFTADEAKEHGFADEVVE 190 >UniRef50_B2V2A3 Peptidase S14, ClpP n=1 Tax=Clostridium botulinum E3 str. Alaska E43 RepID=B2V2A3_CLOBA Length = 377 Score = 131 bits (330), Expect = 1e-29, Method: Composition-based stats. Identities = 37/142 (26%), Positives = 60/142 (42%), Gaps = 4/142 (2%) Query: 64 LEAENPEKDIYLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKG 123 L+ +I + INS GG + +IY ++ K ++ G A S + AG Sbjct: 44 LDLYKDRDNITVRINSNGGDVFTASAIYTLLKDCKASITVKIDGMAMSAATVVAMAG--D 101 Query: 124 KRFCLPNSRVMIHQPLGGYQG--QATDIEIHAREILKVKGRMNELMALHTGQSLEQIERD 181 K S MIH PL G G +D+E + VK + T ++ E+IE Sbjct: 102 KVLIPSTSIFMIHDPLAGLCGYYNVSDLEKVINRLSVVKNTIINAYINKTDKTKEEIEDL 161 Query: 182 TERDRFLSAPEAVEYGLVDSIL 203 + +L+ +AV G D ++ Sbjct: 162 MTNELWLTGEDAVNEGFCDEVM 183 >UniRef50_A8RU31 ATP-dependent Clp protease proteolytic subunit n=3 Tax=Clostridiales RepID=A8RU31_9CLOT Length = 259 Score = 131 bits (329), Expect = 2e-29, Method: Composition-based stats. Identities = 36/133 (27%), Positives = 65/133 (48%), Gaps = 3/133 (2%) Query: 66 AENPEKDIYLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKR 125 AE +D+ +YINS GG + AG++IY+ ++ + A S+ + L K Sbjct: 65 AEANGRDLNIYINSGGGSVFAGIAIYNMLKRYQGKKHCFVDALAGSIAS-LFPFVDSDKP 123 Query: 126 FCLPNSRVMIHQPLGGYQGQATDIEIHAREILKVKGRMNELMALH--TGQSLEQIERDTE 183 N+ +MIH+P +G A ++ A + ++ + + H G ++EQI+ E Sbjct: 124 TIPKNAYLMIHKPWCDCEGNANELRKMADTLEAIEAGIWSIYEEHLAEGVTIEQIKELME 183 Query: 184 RDRFLSAPEAVEY 196 + +LS EA +Y Sbjct: 184 AETWLSGEEAAKY 196 >UniRef50_Q3LW56 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Bigelowiella natans RepID=Q3LW56_BIGNA Length = 183 Score = 131 bits (329), Expect = 2e-29, Method: Composition-based stats. Identities = 42/177 (23%), Positives = 90/177 (50%), Gaps = 8/177 (4%) Query: 35 SRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVIT-------AG 87 + LL++ +++L+ +++ + ++ +L+L+ +N + I LYIN G Sbjct: 7 TFLLEKNILYLSTEIDFNSTKSFISTILYLKNKNSNETINLYINGKGSSYYNLFSRYDQI 66 Query: 88 MSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQG-QA 146 +S++D + +K +ST+ +G A + + + G+K R+ LP+S + I + Q Sbjct: 67 ISMHDIINSMKSKLSTLVLGIAFNEMCLISSYGSKDYRYALPSSLLYIDVFMNSIGSSQT 126 Query: 147 TDIEIHAREILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEAVEYGLVDSIL 203 +DI I E+ K + + + HT + +I R +++ EA+ YG++D I+ Sbjct: 127 SDIGIKKSELYKFNNLIINIFSKHTMRHPTEITSYMTRPFHMTSVEALNYGIIDKII 183 >UniRef50_A5ZRV6 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Ruminococcus obeum ATCC 29174 RepID=A5ZRV6_9FIRM Length = 252 Score = 131 bits (329), Expect = 2e-29, Method: Composition-based stats. Identities = 37/162 (22%), Positives = 72/162 (44%), Gaps = 11/162 (6%) Query: 43 IFLTGQVEDHM-----ANLIVAQML--FLEAENPEKDIYLYINSPGGVITAGMSIYDTMQ 95 +++ G + Q + F+ P ++ +YINS GG + AG++I+ + Sbjct: 35 LYIYGDIVSSTWEAWCDEDTCPQDISDFMNQIEPGAELTVYINSGGGDVFAGIAIHSILS 94 Query: 96 FIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHARE 155 + I G AAS+ + +L A +++MIH+PL G A D + E Sbjct: 95 RHTGHKTGIVDGMAASIASVILMAC--DSIVMSSGAQIMIHKPLSWAYGNADDFQRLISE 152 Query: 156 ILKVKGRMNELMA--LHTGQSLEQIERDTERDRFLSAPEAVE 195 + K + + ++ + G + EQ+ + +++A EA E Sbjct: 153 LDKCQKSITDIYMGRVKEGVTEEQVTDLINAETWMTAEEAKE 194 >UniRef50_C8RQH1 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Corynebacterium jeikeium ATCC 43734 RepID=C8RQH1_CORJE Length = 473 Score = 130 bits (328), Expect = 2e-29, Method: Composition-based stats. Identities = 36/168 (21%), Positives = 73/168 (43%), Gaps = 4/168 (2%) Query: 43 IFLTGQVEDHM---ANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIYDTMQFIKP 99 I + G + N I A+ + + D+ + I+S GG + G+ I ++ Sbjct: 4 ILMYGPIGPDFWEPENAITAKSVMAQLSEISGDVTVRISSGGGDVYEGVDIMTALKNHDG 63 Query: 100 DVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREILKV 159 +V+ I AAS +F+ GA + +S +M+H+ +G A D+ ++ + Sbjct: 64 EVTVIVESLAASAASFIAVGGA-DRVLMRKSSEMMLHRAWTLAEGNADDVRKTLGDLERQ 122 Query: 160 KGRMNELMALHTGQSLEQIERDTERDRFLSAPEAVEYGLVDSILTHRN 207 ++ + A G ++ + + +A EAV GL D I+ ++ Sbjct: 123 DNKLAAIYAGKAGGEVQDWLDAMSAETWYTAEEAVAAGLADGIVAEKS 170 >UniRef50_UPI0001BC4FF2 peptidase S14, ClpP n=1 Tax=Fusobacterium ulcerans ATCC 49185 RepID=UPI0001BC4FF2 Length = 367 Score = 129 bits (326), Expect = 4e-29, Method: Composition-based stats. Identities = 40/183 (21%), Positives = 76/183 (41%), Gaps = 10/183 (5%) Query: 30 SFDIYSRLLKERVIFLTGQVEDHMANLI--VAQMLF---LEAENPEKDIYLYINSPGGVI 84 F I + E I ++G++ + ++F LE + + + INSPGG I Sbjct: 6 FFSIKNLSDDEGEIRISGEITRWAWEEFGQTSSLIFIKQLEKIKNARKVSIKINSPGGDI 65 Query: 85 TAGMSIYDTMQFIKP--DVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGY 142 + ++IY ++ + +++ G A S + A K MIH P+ Sbjct: 66 SETLAIYHELKRLSQTKEITAYIDGMACSAATLIAIAAK--KTVMGKGCYFMIHNPMIYM 123 Query: 143 -QGQATDIEIHAREILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEAVEYGLVDS 201 +++ + K K M +L + S E I + + + + +A EA+E G +D Sbjct: 124 GYSNTGEMQEAIEHLNKTKENMIDLYEEKSSLSREDIAKKMDEETYFTAQEALEAGFIDE 183 Query: 202 ILT 204 I + Sbjct: 184 IAS 186 >UniRef50_A5Z441 Putative uncharacterized protein n=1 Tax=Eubacterium ventriosum ATCC 27560 RepID=A5Z441_9FIRM Length = 385 Score = 129 bits (326), Expect = 5e-29, Method: Composition-based stats. Identities = 41/168 (24%), Positives = 74/168 (44%), Gaps = 9/168 (5%) Query: 43 IFLTGQVEDHM--ANLIVAQMLFLEAEN--PEKDIYLYINSPGGVITAGMSIYDTMQFIK 98 + L G++ ++ + I + E ++ +I + INS GG + A ++IY ++ K Sbjct: 33 MLLYGEISEYSWYGDEITPSVFNQELKDLGAVDEITVRINSGGGDVFAAVAIYTRLKEHK 92 Query: 99 PDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQG--QATDIEIHAREI 156 +S G AS + AG + MIH PL G G TD+E +E+ Sbjct: 93 AKISVKIDGWCASAATIIAMAGDTIEISV--GGVFMIHDPLAGLIGYYNTTDLENIVKEL 150 Query: 157 LKVKGRMNELMALHTGQSLEQIERDTERD-RFLSAPEAVEYGLVDSIL 203 +K + T +S E+I+ + + + EAVE G +++ Sbjct: 151 ETIKQSIVNCYMTVTDKSEEEIKSLMTNEGEWFTGEEAVEAGFCTAVM 198 >UniRef50_UPI0001BC65FA prophage LambdaBa02, Clp protease family protein n=1 Tax=Fusobacterium gonidiaformans ATCC 25563 RepID=UPI0001BC65FA Length = 371 Score = 128 bits (323), Expect = 9e-29, Method: Composition-based stats. Identities = 34/170 (20%), Positives = 72/170 (42%), Gaps = 9/170 (5%) Query: 36 RLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIYDTMQ 95 R+ + +V + ++ ++ L+ + I L +NS GG + +I++ ++ Sbjct: 21 RIYGTITKWAWEEVGEVSSHSFAKELKNLKNISK---INLRVNSGGGDVFEANAIFNLLK 77 Query: 96 FIKPDVST----ICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEI 151 + + G AAS +FL+ K MIH P +G ++ Sbjct: 78 SYAKENNVEIIGYIDGLAASAASFLVLCA--HKVIMGVGCLFMIHNPWTYTKGNVKELGQ 135 Query: 152 HAREILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEAVEYGLVDS 201 + K+K + ++ T + ++I + + +++ SA EA+E G VD Sbjct: 136 TIDFLNKIKESILDIYETKTKLTRQEISQKMDEEKWFSASEALESGFVDE 185 >UniRef50_C4FX34 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Catonella morbi ATCC 51271 RepID=C4FX34_9FIRM Length = 250 Score = 128 bits (323), Expect = 9e-29, Method: Composition-based stats. Identities = 36/148 (24%), Positives = 68/148 (45%), Gaps = 2/148 (1%) Query: 55 NLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGA 114 + + A+++ E +K I + +NSPGG + G+ IY+ ++ V+ G AAS + Sbjct: 37 DAVSAKLVRDSLEGVDKPILIKLNSPGGDVFEGIEIYNYLKNHNQSVTVEITGVAASAAS 96 Query: 115 FLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREILKVKGRMNELMALHTGQS 174 + K + +MIH+ G TDI+ + + + + A TG Sbjct: 97 IIAMGA--DKIIMNTGTTLMIHEASSFAFGNKTDIQKVLNALETIDASLVAIYAERTGID 154 Query: 175 LEQIERDTERDRFLSAPEAVEYGLVDSI 202 ++I+ + +L+A EAV+ G D + Sbjct: 155 TDEIKDLLNAETWLTAEEAVDKGFADEV 182 >UniRef50_C6VLG0 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Lactobacillus plantarum JDM1 RepID=C6VLG0_LACPJ Length = 247 Score = 128 bits (321), Expect = 2e-28, Method: Composition-based stats. Identities = 37/136 (27%), Positives = 64/136 (47%), Gaps = 2/136 (1%) Query: 68 NPEKDIYLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFC 127 + + + INS GG++ AG IY + + V +G AAS + + AG + Sbjct: 38 DDGSTVEVDINSGGGLMDAGTEIYTALMAYQGKVMVNIVGMAASSASLIAMAGNPTR--I 95 Query: 128 LPNSRVMIHQPLGGYQGQATDIEIHAREILKVKGRMNELMALHTGQSLEQIERDTERDRF 187 P ++MIH GG +G D + + + + L TG S+E ++ + + + Sbjct: 96 SPVGQIMIHNVAGGLRGDYRDQAKLSEILKQSSEAIANAYHLKTGLSMEDLQAKMDSETY 155 Query: 188 LSAPEAVEYGLVDSIL 203 L+A +A E G VD I+ Sbjct: 156 LNADQAKELGFVDEIM 171 >UniRef50_C6UN97 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Candidatus Hodgkinia cicadicola Dsem RepID=C6UN97_HODCD Length = 160 Score = 127 bits (319), Expect = 3e-28, Method: Composition-based stats. Identities = 50/161 (31%), Positives = 81/161 (50%), Gaps = 2/161 (1%) Query: 43 IFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIYDTMQFIKPDVS 102 + + G++ A +++ L+ + + + L I+SPGG I AGM +YD +Q + DV Sbjct: 2 LMVAGEITSKRALEARSKL--LKTASTRRVLKLLIDSPGGEIDAGMGLYDALQAVAADVE 59 Query: 103 TICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREILKVKGR 162 T C+GQA S+ + LL G +GKR+C + V +H P G A + HA L+ + Sbjct: 60 TGCVGQAHSIASLLLACGKRGKRWCAASCSVSLHWPTSSAFGSADCVLQHASSALEARAL 119 Query: 163 MNELMALHTGQSLEQIERDTERDRFLSAPEAVEYGLVDSIL 203 + H + L +IE SA A +GLVD ++ Sbjct: 120 AVKAYMKHCNRRLAEIEEAMSAGTCASAWRAAAWGLVDRVV 160 >UniRef50_B0MY38 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Alistipes putredinis DSM 17216 RepID=B0MY38_9BACT Length = 335 Score = 126 bits (318), Expect = 4e-28, Method: Composition-based stats. Identities = 35/138 (25%), Positives = 64/138 (46%), Gaps = 4/138 (2%) Query: 72 DIYLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNS 131 +I + I S GG + + IY+ + + + T C G AS + A ++G R ++ Sbjct: 99 EIVVNIRSTGGDVNDALLIYEALSSLDGHIVTRCYGYTASAATVIAQAASEGCREISAHA 158 Query: 132 RVMIHQPLGGYQGQATDIEIHAREILKVKGRMNELMALHTGQSLEQIERDTERD----RF 187 +IH + +G A ++ + K R+ E+ A +G++ E+ + R+ Sbjct: 159 LYLIHNSICTAEGNAEELATRIDLLRKTDARLAEVYAARSGRTPEEFTLLMAENNGSGRW 218 Query: 188 LSAPEAVEYGLVDSILTH 205 LS EA+ GLVD I+ Sbjct: 219 LSPQEALAAGLVDRIIEP 236 >UniRef50_Q03FG4 Protease subunit of ATP-dependent Clp protease n=20 Tax=root RepID=Q03FG4_PEDPA Length = 251 Score = 126 bits (317), Expect = 5e-28, Method: Composition-based stats. Identities = 32/127 (25%), Positives = 55/127 (43%), Gaps = 2/127 (1%) Query: 77 INSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIH 136 I S GG + A IY ++ +V+ G AAS + + AG P +++MIH Sbjct: 57 IASNGGDVFAASEIYTMLKNYAGNVTVNIQGLAASAASVIAMAG--DHINISPTAQIMIH 114 Query: 137 QPLGGYQGQATDIEIHAREILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEAVEY 196 + G A D+E A + + + TG + + + +L+A +AV+ Sbjct: 115 KAWSQPAGNADDLEHEASVLNGIDQSIASAYEAKTGMDQADLLQLMANETWLTASDAVDK 174 Query: 197 GLVDSIL 203 G D I+ Sbjct: 175 GFADEIM 181 >UniRef50_A9APU6 ATP-dependent Clp protease proteolytic subunit n=8 Tax=root RepID=A9APU6_BURM1 Length = 280 Score = 126 bits (317), Expect = 5e-28, Method: Composition-based stats. Identities = 33/129 (25%), Positives = 59/129 (45%), Gaps = 2/129 (1%) Query: 71 KDIYLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPN 130 +++ + +NSPGG G++IY+ ++ K V+ MG AAS + + AG + Sbjct: 75 REVTVNVNSPGGDFFEGVAIYNLLREHKAKVTVNVMGLAASAASVIAMAG--DEILMGDG 132 Query: 131 SRVMIHQPLGGYQGQATDIEIHAREILKVKGRMNELMALHTGQSLEQIERDTERDRFLSA 190 + +MIH G D+ A + M +L A G S E +++ ++ A Sbjct: 133 AFLMIHNAWAVAIGNRHDMAAAAATLAPFDAAMAKLYAQRAGISEETAAAMMDKETWIGA 192 Query: 191 PEAVEYGLV 199 +AV+ G Sbjct: 193 DQAVKDGFA 201 >UniRef50_Q1QKR7 ATP-dependent Clp protease proteolytic subunit n=2 Tax=Alphaproteobacteria RepID=Q1QKR7_NITHX Length = 351 Score = 125 bits (315), Expect = 8e-28, Method: Composition-based stats. Identities = 38/164 (23%), Positives = 71/164 (43%), Gaps = 5/164 (3%) Query: 37 LLKERVIFLTGQVEDH-MANLIVAQ--MLFLEAENPEKDIYLYINSPGGVITAGMSIYDT 93 + ++ + L G V + A + L + D+ + +NS GG++ ++IY+ Sbjct: 3 VYQDGELVLYGIVGESFWDEGFTASEVLAALAEHGRDNDLTVRLNSGGGIVNDAIAIYNA 62 Query: 94 MQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHA 153 + K V+ AAS + AG + S +MIH P+ G D E Sbjct: 63 LSTHKGKVTIQVDAIAASAATVIAMAGQ--EIVMRVGSIMMIHDPMNVTFGNIEDHEKTI 120 Query: 154 REILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEAVEYG 197 ++ +M + A +G L+ + D + + +L+A +AVE G Sbjct: 121 EQLTAYANQMASIYAERSGNELDDVRSDMKAEIWLTAEQAVEKG 164 >UniRef50_B1RAB0 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Clostridium perfringens B str. ATCC 3626 RepID=B1RAB0_CLOPE Length = 255 Score = 125 bits (315), Expect = 8e-28, Method: Composition-based stats. Identities = 36/149 (24%), Positives = 66/149 (44%), Gaps = 7/149 (4%) Query: 64 LEAENPEKDIYLYINSPGGVITAGMSIYDTMQFI--KPDVSTICMGQAASMGAFLLTAGA 121 LE+ + +YINSPGG + G +I++ ++ ++ G AAS+ + + AG Sbjct: 45 LESLGDISTLNVYINSPGGDVFEGYAIFNVLRRKADNCQINVYIDGMAASIASVIAMAGT 104 Query: 122 KGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREILKVKGRMNELMALHTGQSLEQIERD 181 N+ +MIH+ G G + + + + K+ M + + L+ D Sbjct: 105 --HISMPSNAVMMIHRASIGIYGNSDVLAKGIKFLEKIDNNMKQTYINRSNGKLDDSTLD 162 Query: 182 ---TERDRFLSAPEAVEYGLVDSILTHRN 207 + D +L+A E +EYGL D + Sbjct: 163 FLFSNGDTWLTAQECLEYGLCDEVTEEIK 191 >UniRef50_C4GAS5 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Shuttleworthia satelles DSM 14600 RepID=C4GAS5_9FIRM Length = 224 Score = 124 bits (313), Expect = 1e-27, Method: Composition-based stats. Identities = 38/144 (26%), Positives = 66/144 (45%), Gaps = 4/144 (2%) Query: 59 AQMLFLEAENPEKDIYLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLT 118 A + LE + EK + + INS GG + A IY +Q K DV +G AAS + + Sbjct: 40 AVLRQLEEASGEK-VDIDINSAGGNVFAASEIYAAIQGYKGDVKIHVVGLAASAASMIAC 98 Query: 119 AGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREILKVKGRMNELMALHTGQSLEQI 178 AG +++M+H G D+ + + + + E +G S + Sbjct: 99 AGKSD---ITRTAQMMVHNVSAYTAGDYRDMNHASEVLKQANRAIAEAYVAKSGMSEKDA 155 Query: 179 ERDTERDRFLSAPEAVEYGLVDSI 202 + + +++A +AV+YGL+D I Sbjct: 156 LDLMDAETWITAQDAVDYGLIDEI 179 >UniRef50_C4WDN9 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Staphylococcus warneri L37603 RepID=C4WDN9_STAWA Length = 258 Score = 124 bits (313), Expect = 1e-27, Method: Composition-based stats. Identities = 34/176 (19%), Positives = 74/176 (42%), Gaps = 11/176 (6%) Query: 31 FDIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSI 90 DIY + + + + L+A ++ + INS GG + +G++I Sbjct: 6 IDIYGFIDSQTI--EGMTISPQTVRE------QLKAMGDVDEVVVNINSNGGDVFSGVTI 57 Query: 91 YDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIE 150 Y+ ++ ++ G AAS+ + + AG N+ +M+H +G A + Sbjct: 58 YNMLRRFDAHITVNVDGLAASIASVIAMAG--DTINMPGNAMLMVHNAWTVNEGDARSFK 115 Query: 151 IHAREILKVKGRMNELMALHTGQSLEQIERD-TERDRFLSAPEAVEYGLVDSILTH 205 A ++ ++ + + +D + + +L+A EA + GL+D+I + Sbjct: 116 KRAEDLERINSVVFNSYVDKNPDIDHALLQDYMDEETWLTAKEAKKLGLIDNITEN 171 >UniRef50_Q5IX12 ATP-dependent Clp protease proteolytic subunit (Fragment) n=1 Tax=Prototheca wickerhamii RepID=Q5IX12_PROWI Length = 251 Score = 123 bits (310), Expect = 3e-27, Method: Composition-based stats. Identities = 42/122 (34%), Positives = 67/122 (54%), Gaps = 9/122 (7%) Query: 19 MVIEQTSRGERSFDIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYIN 78 M + + G D+ S LL R+ ++ + + L+++++L+L +P K +Y+YIN Sbjct: 130 MAQDTRAPGRAPPDLPSLLLDGRICYIGMPLVPAVTELVISELLWLNYSSPTKPVYVYIN 189 Query: 79 SPG---------GVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLP 129 S G G T +I DTM +I+PD+ T+ +GQA A LL +G KG RF LP Sbjct: 190 STGSQREGGESVGFETEATAIMDTMAYIRPDIYTLVIGQACGNAAMLLASGKKGHRFALP 249 Query: 130 NS 131 +S Sbjct: 250 HS 251 >UniRef50_C3WBA5 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Fusobacterium mortiferum ATCC 9817 RepID=C3WBA5_FUSMR Length = 361 Score = 123 bits (309), Expect = 4e-27, Method: Composition-based stats. Identities = 34/142 (23%), Positives = 57/142 (40%), Gaps = 5/142 (3%) Query: 64 LEAENPEKDIYLYINSPGGVITAGMSIYDTMQFI--KPDVSTICMGQAASMGAFLLTAGA 121 L K + L INSPGG + +++Y ++ +V+ G AAS L A Sbjct: 47 LANLKNVKKLELKINSPGGDVFEAVAMYHEIKRFAQGKEVTAYIDGMAASAATILTLAA- 105 Query: 122 KGKRFCLPNSRVMIHQPLGGY-QGQATDIEIHAREILKVKGRMNELMALHTGQSLEQIER 180 K MIH PL ++ + K K + +L S ++I Sbjct: 106 -NKTIMGKGCYFMIHNPLMYMGYANVEEMNEAIEHLNKTKDNLLDLYEEKCKLSRDEIAE 164 Query: 181 DTERDRFLSAPEAVEYGLVDSI 202 ++ + +A EA++ G +D I Sbjct: 165 KMDKTTWYTAEEALQAGFIDEI 186 >UniRef50_B6FWW7 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Clostridium hiranonis DSM 13275 RepID=B6FWW7_9CLOT Length = 244 Score = 122 bits (307), Expect = 7e-27, Method: Composition-based stats. Identities = 33/133 (24%), Positives = 68/133 (51%), Gaps = 7/133 (5%) Query: 69 PEKDIYLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCL 128 +KD+ ++INS GG + AG++IY+ ++ K + G AAS+ + + AG + Sbjct: 57 EDKDLEIHINSGGGSVFAGITIYNMLKNFKGHKTVYVDGLAASIASVIALAG--DEVVMR 114 Query: 129 PNSRVMIHQPLGGYQGQ---ATDIEIHAREILKVKGRMNELMAL--HTGQSLEQIERDTE 183 S +MIH+P Q A +++ + + K++ + ++ LE+IE Sbjct: 115 TGSSMMIHKPSVYIYNQSLNADELKGMSETLDKLQECIMQIYRENLKDKSKLEEIETMVN 174 Query: 184 RDRFLSAPEAVEY 196 + ++++ EA++Y Sbjct: 175 AETWMTSEEAMDY 187 >UniRef50_D2LX80 Peptidase S14 ClpP n=1 Tax=Bacillus cellulosilyticus DSM 2522 RepID=D2LX80_BACS4 Length = 243 Score = 121 bits (305), Expect = 1e-26, Method: Composition-based stats. Identities = 35/131 (26%), Positives = 65/131 (49%), Gaps = 7/131 (5%) Query: 71 KDIYLYINSPGGVITAGMSIYDTMQFIKPD---VSTICMGQAASMGAFLLTAGAKGKRFC 127 K I LY+NS GG + +G+S+ + ++ + ++ G A S+ + L+ K +C Sbjct: 50 KKINLYVNSGGGSVFSGLSMLNMLKRAREKGSYITAYVDGLAGSIASVLIFGA--NKIYC 107 Query: 128 LPNSRVMIHQPLGGYQGQATDIEIHAREILKVKGRMNELMA--LHTGQSLEQIERDTERD 185 NS +MIH+ G G ATD A ++ K+ + L G +E I+ +++ Sbjct: 108 PSNSYIMIHRAWTGMYGNATDFLKMAEDLEKIDEGILNTYKDNLREGVDIETIKEMVDKE 167 Query: 186 RFLSAPEAVEY 196 +L+ +A +Y Sbjct: 168 TWLTGEDASKY 178 >UniRef50_C7XJ21 ATP-dependent Clp protease, proteolytic subunit n=1 Tax=Lactobacillus crispatus 125-2-CHN RepID=C7XJ21_9LACO Length = 239 Score = 121 bits (305), Expect = 1e-26, Method: Composition-based stats. Identities = 38/164 (23%), Positives = 70/164 (42%), Gaps = 4/164 (2%) Query: 46 TGQVEDHMANLIVAQMLFLEAENPEK--DIYLYINSPGGVITAGMSIYDTMQFIKPDVST 103 TGQ D+ V+ + ++ + + ++ L I S GG + A IY + V+ Sbjct: 18 TGQFFDYWGMQCVSPQMVKDSLDKAQGDEVELDIASYGGDVFAASEIYSMINQYSGKVTG 77 Query: 104 ICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREILKVKGRM 163 + G AAS + A P ++MIH+ G + D A + + Sbjct: 78 VIQGMAASAATIIAEAC--DHLVISPAGQMMIHKASTAGAGNSDDFTHTAGVLNTTDRTI 135 Query: 164 NELMALHTGQSLEQIERDTERDRFLSAPEAVEYGLVDSILTHRN 207 + TG+S E++ +++ +L+A +AVE G D I+ + Sbjct: 136 AGIYQNRTGKSEEEVLNLMKQETYLTAKDAVEQGFADEIMKKSD 179 >UniRef50_B3Y5P7 ATP-dependent Clp protease proteolytic subunit (Fragment) n=1 Tax=Chlorophyta sp. MBIC11204 RepID=B3Y5P7_9CHLO Length = 131 Score = 120 bits (302), Expect = 3e-26, Method: Composition-based stats. Identities = 47/82 (57%), Positives = 62/82 (75%) Query: 97 IKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREI 156 I+ +ST+C+GQAASM + LL AG KG+R LPNSR+M+HQP GG+QGQA+DI IHA EI Sbjct: 1 IRNPISTLCVGQAASMASLLLAAGEKGQRRSLPNSRIMLHQPSGGFQGQASDIRIHAEEI 60 Query: 157 LKVKGRMNELMALHTGQSLEQI 178 ++ R+N++ A HTGQ I Sbjct: 61 TRLSKRLNQIYAKHTGQPENLI 82 >UniRef50_C3WAW3 ATP-dependent Clp protease proteolytic subunit n=2 Tax=Fusobacterium RepID=C3WAW3_FUSMR Length = 257 Score = 120 bits (301), Expect = 3e-26, Method: Composition-based stats. Identities = 35/159 (22%), Positives = 70/159 (44%), Gaps = 7/159 (4%) Query: 43 IFLTGQV--EDHMANLIV-AQMLFLEAENPEKDIYLYINSPGGVITAGMSIYDTMQFIKP 99 + + G++ + + + ++ L KD+ ++INS GG + AG++IY ++ + Sbjct: 37 LSIYGEISSDKWWGDEVTPTEIKELLDTVKNKDLNIFINSSGGNVFAGLAIYHMLKRHEG 96 Query: 100 DVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREILKV 159 G AAS+ + + AG + N+ +MIH+ G D+ + K+ Sbjct: 97 KKKVYVDGVAASIASIIAMAG--DEIHIPKNAYLMIHRSWICTAGNKNDLLETISMLEKM 154 Query: 160 KGRMNELMALH--TGQSLEQIERDTERDRFLSAPEAVEY 196 M ++ T S E+I + + +L+ EA Y Sbjct: 155 DINMADIYKTKALTDISNEKILELMDNETWLTGIEAQNY 193 >UniRef50_D2LST4 Peptidase S14 ClpP n=1 Tax=Bacillus cellulosilyticus DSM 2522 RepID=D2LST4_BACS4 Length = 250 Score = 120 bits (301), Expect = 3e-26, Method: Composition-based stats. Identities = 40/140 (28%), Positives = 66/140 (47%), Gaps = 2/140 (1%) Query: 64 LEAENPEKDIYLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKG 123 L E +D+ + INS GG + AG IY ++ K +V MG AAS + G Sbjct: 34 LIEEANGEDLEVEINSGGGSVWAGSEIYTLLKSCKQNVVVNIMGIAASAASVAAMGGKLI 93 Query: 124 KRFCLPNSRVMIHQPLGGYQGQATDIEIHAREILKVKGRMNELMALHTGQSLEQIERDTE 183 + P ++MIH + G G ++E A + V + L TG+++E++ Sbjct: 94 R--IAPTGQIMIHNSMSGASGDHRELEHAAEMLKGVDRSIANAYILKTGKNMEELLSLMA 151 Query: 184 RDRFLSAPEAVEYGLVDSIL 203 ++ ++ A EA E G D I+ Sbjct: 152 KETYMGAKEAKELGFADEIM 171 >UniRef50_B4D6M6 Peptidase S14 ClpP n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D6M6_9BACT Length = 439 Score = 120 bits (301), Expect = 4e-26, Method: Composition-based stats. Identities = 42/178 (23%), Positives = 77/178 (43%), Gaps = 8/178 (4%) Query: 32 DIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYIN-SPGGVITAGMSI 90 D +L +R I L G + A+ + +++ + +N + I++ I+ SPGG + AG I Sbjct: 196 DDGELVLTDRRIPLNGLISPATADFVCSRIDYFNNKNKDWPIFIVIDDSPGGSVMAGNKI 255 Query: 91 YDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIE 150 ++M V + AASM A + T + + PN+ ++ HQ G G T+ Sbjct: 256 LESMHSSTAPVYVVVKTFAASMAATIATLAPRS--YAYPNAVILHHQISNGMMGNLTEQR 313 Query: 151 IHAREILKVKGRMNELMALHTGQSLEQIERDT-----ERDRFLSAPEAVEYGLVDSIL 203 + + + RM +A G S + + D EAV+ +D ++ Sbjct: 314 EGLKNLEQWWKRMATPIAAKMGISTDDFVKQMYTHAASGDWQEFGDEAVKLKWIDMVV 371 >UniRef50_B0NDG2 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Clostridium scindens ATCC 35704 RepID=B0NDG2_EUBSP Length = 275 Score = 119 bits (300), Expect = 4e-26, Method: Composition-based stats. Identities = 35/143 (24%), Positives = 69/143 (48%), Gaps = 6/143 (4%) Query: 63 FLEAENPEKDIYLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAK 122 FL + +DI +Y NS GG + AG++IY+ ++ G AAS+ + ++ A Sbjct: 66 FLNQLDGYEDIDIYFNSGGGDVFAGLAIYNQLKRYSGHKVGYVDGMAASIASVIMFAC-- 123 Query: 123 GKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREILKVKGRMNELMALH--TGQSLEQIER 180 + ++ MIH+PL G A D + +++ + + ++ H G + ++I+ Sbjct: 124 DELHFATGAQAMIHKPLCMAWGNADDFKEVIKQLDLCEDSILDVYEEHLKEGVTRDKIKS 183 Query: 181 DTERDRFLSAPEAVEY--GLVDS 201 ++++ S E EY L+D Sbjct: 184 FMAKEKWFSGAELAEYFDVLIDE 206 >UniRef50_Q88IF4 ATP-dependent Clp protease proteolytic subunit n=6 Tax=Pseudomonas RepID=Q88IF4_PSEPK Length = 387 Score = 119 bits (300), Expect = 5e-26, Method: Composition-based stats. Identities = 32/163 (19%), Positives = 66/163 (40%), Gaps = 7/163 (4%) Query: 43 IFLTGQVEDH--MANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIYDTMQFIKPD 100 +++ G++ AN + + ++ + I + N+ GG + G++I++ + + Sbjct: 42 VYVYGEIGAWGITANQFIQDLKAID--DGTSPIVVAFNTNGGDLFEGLAIHNALSRLGER 99 Query: 101 VSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREILKVK 160 + AAS G+ + + N+ +MIH P G A D+ A + + Sbjct: 100 CTGRVDALAASAGSVAVCGA--HRVVMASNAMLMIHNPYTWVGGDAEDLRRVADVLDQAF 157 Query: 161 GRMNELMALHT-GQSLEQIERDTERDRFLSAPEAVEYGLVDSI 202 M ++ R + +L+A EAV GL D + Sbjct: 158 EAMIAAYKAKAPNIDDAELRRLVNAESWLTASEAVALGLADEV 200 >UniRef50_A3LLS6 Putative uncharacterized protein n=1 Tax=Pseudomonas aeruginosa 2192 RepID=A3LLS6_PSEAE Length = 390 Score = 119 bits (300), Expect = 5e-26, Method: Composition-based stats. Identities = 28/164 (17%), Positives = 69/164 (42%), Gaps = 7/164 (4%) Query: 43 IFLTGQVEDH--MANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIYDTMQFIKPD 100 I++ G++ + + + ++ + + ++ ++ GG + G++I++ ++ + Sbjct: 62 IYIYGEIGFWGITSADFIRDLKAVD--DGTSPVLVHFDTIGGDLFDGIAIHNALRALGER 119 Query: 101 VSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREILKVK 160 + G S G+ + + N+ MIH P G + D+ A + + Sbjct: 120 CTARIDGACFSAGSVAACGAHRVE--MADNALFMIHNPWTLAAGDSEDLRKVADMMDQAF 177 Query: 161 GRMNELMALHT-GQSLEQIERDTERDRFLSAPEAVEYGLVDSIL 203 + T ++ R + + +L+APEA + G VD +L Sbjct: 178 EGIVASYQHRTLNVDDAELRRMIDDETWLTAPEAKDKGFVDEVL 221 >UniRef50_B6KPT2 ATP-dependent Clp protease proteolytic subunit n=3 Tax=Toxoplasma gondii RepID=B6KPT2_TOXGO Length = 310 Score = 119 bits (299), Expect = 5e-26, Method: Composition-based stats. Identities = 51/162 (31%), Positives = 73/162 (45%), Gaps = 28/162 (17%) Query: 72 DIYLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNS 131 + L INSPGG +TA +S+ D + +V T +GQA + A LL AG G R P+ Sbjct: 143 PVDLLINSPGGSVTAALSLLDLRHSLPFEVHTTSIGQAGGVAALLLAAGTPGHRRAFPSC 202 Query: 132 RVMIHQPLGGYQGQATDIEIHAREILKVKGRMNELMALHT-------------------- 171 R + Q G +GQA IE EI V+ + +A Sbjct: 203 RFSLRQIEGRVEGQAETIERETAEIESVQRLVYRHLAAFCTRRGPGDRGSERESHSERGE 262 Query: 172 -GQSLE-------QIERDTERDRFLSAPEAVEYGLVDSILTH 205 G+ E +I+ D E + FLSA + VEYGL+D ++ Sbjct: 263 AGEDRERLAKREKEIQEDCENELFLSAEQGVEYGLIDQVIQP 304 >UniRef50_UPI00017450C3 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Verrucomicrobium spinosum DSM 4136 RepID=UPI00017450C3 Length = 462 Score = 119 bits (299), Expect = 5e-26, Method: Composition-based stats. Identities = 41/175 (23%), Positives = 76/175 (43%), Gaps = 8/175 (4%) Query: 37 LLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYIN-SPGGVITAGMSIYDTMQ 95 ++ +R I L G + A+ ++A++ + + + I+L I+ SPGG + AG I MQ Sbjct: 214 VMSDRRIALNGPISMRTADNVIARINYFNNRDAKLPIFLVIDDSPGGSVMAGYKIVKAMQ 273 Query: 96 FIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHARE 155 + V + AASM A + T + N+ ++ HQ G T + +E Sbjct: 274 GSQAPVHVVVKSFAASMAACIATVAKHS--YAYSNTVILHHQIHSFAGGNLTQQQEWLKE 331 Query: 156 ILKVKGRMNELMALHTGQSLEQIERDT-----ERDRFLSAPEAVEYGLVDSILTH 205 + + R+ + +A+ G S E++ + D A + VD I+ Sbjct: 332 MEEWWRRLADPVAVKMGISREELIKQMYAHASSGDWSEFGDNAQKLKWVDHIVDE 386 >UniRef50_A6QII7 ATP-dependent Clp protease proteolytic subunit n=38 Tax=root RepID=A6QII7_STAAE Length = 245 Score = 119 bits (299), Expect = 6e-26, Method: Composition-based stats. Identities = 44/170 (25%), Positives = 81/170 (47%), Gaps = 8/170 (4%) Query: 39 KERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIYDTMQFIK 98 +++ ++ ++ ++ Q+ E ++D+ + INS GG + AG IY ++ K Sbjct: 13 EDKWVYEMLGMDSTCPKDVLTQL-----EFSDEDVDIIINSNGGNLVAGSEIYTHLRAHK 67 Query: 99 PDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREILK 158 V+ AAS + + AG P +R+MIH P QG+A D+ A + Sbjct: 68 GKVNVRITAIAASAASLIAMAG--DHIEMSPVARMMIHNPSSIAQGEAKDLNHAAETLEH 125 Query: 159 VKGRMNELMALHTGQSLEQIERDTERDRFLSAPEAVEYGLVD-SILTHRN 207 V M E A+ G++ +++ R+ +L+A EA+E G D + + N Sbjct: 126 VGQIMAEAYAVRAGKNKQELVEMMARETWLNADEAIEQGFADSKMFENDN 175 Searching..................................................done Results from round 3 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_C4K4P2 ATP-dependent Clp protease proteolytic subunit n... 262 4e-69 UniRef50_D0MF29 ATP-dependent Clp protease proteolytic subunit n... 259 5e-68 UniRef50_A4JF05 ATP-dependent Clp protease proteolytic subunit n... 258 7e-68 UniRef50_Q7V992 ATP-dependent Clp protease proteolytic subunit 1... 258 1e-67 UniRef50_Q1RJH2 ATP-dependent Clp protease proteolytic subunit n... 256 5e-67 UniRef50_A8H614 ATP-dependent Clp protease proteolytic subunit n... 255 8e-67 UniRef50_A5W635 ATP-dependent Clp protease proteolytic subunit n... 255 9e-67 UniRef50_Q11J60 ATP-dependent Clp protease proteolytic subunit 1... 254 2e-66 UniRef50_Q8DJZ9 ATP-dependent Clp protease proteolytic subunit 2... 253 3e-66 UniRef50_C9KKA6 ATP-dependent Clp protease proteolytic subunit n... 251 8e-66 UniRef50_Q2G3T3 ATP-dependent Clp protease proteolytic subunit n... 251 1e-65 UniRef50_O34125 ATP-dependent Clp protease proteolytic subunit 2... 249 4e-65 UniRef50_Q1PW15 ATP-dependent Clp protease proteolytic subunit n... 247 2e-64 UniRef50_Q2RZ59 ATP-dependent Clp protease proteolytic subunit 2... 244 1e-63 UniRef50_A6Q675 ATP-dependent Clp protease proteolytic subunit n... 244 1e-63 UniRef50_Q9S834 ATP-dependent Clp protease proteolytic subunit 5... 243 3e-63 UniRef50_Q0CXE7 ATP-dependent Clp protease proteolytic subunit n... 243 3e-63 UniRef50_D0WES0 ATP-dependent Clp protease proteolytic subunit n... 242 6e-63 UniRef50_Q7UK66 ATP-dependent Clp protease proteolytic subunit 2... 241 1e-62 UniRef50_Q2JHM1 ATP-dependent Clp protease proteolytic subunit 1... 228 9e-59 UniRef50_Q64NW2 ATP-dependent Clp protease proteolytic subunit n... 228 1e-58 UniRef50_Q27539 ATP-dependent Clp protease proteolytic subunit, ... 227 1e-58 UniRef50_C1FDX2 ATP-dependent Clp protease proteolytic subunit n... 224 1e-57 UniRef50_Q7UK67 ATP-dependent Clp protease proteolytic subunit 1... 221 1e-56 UniRef50_UPI00016C35C0 ATP-dependent Clp protease proteolytic su... 219 4e-56 UniRef50_Q4JWV4 ATP-dependent Clp protease proteolytic subunit 1... 219 5e-56 UniRef50_A8RFM5 ATP-dependent Clp protease proteolytic subunit n... 216 3e-55 UniRef50_Q9MUV8 ATP-dependent Clp protease proteolytic subunit n... 216 4e-55 UniRef50_Q05FR8 ATP-dependent Clp protease proteolytic subunit n... 216 4e-55 UniRef50_A4RXD2 ATP-dependent Clp protease proteolytic subunit n... 215 9e-55 UniRef50_Q9SXJ6 ATP-dependent Clp protease proteolytic subunit 3... 215 9e-55 UniRef50_C0M7M8 ATP-dependent Clp protease proteolytic subunit n... 214 1e-54 UniRef50_Q2J9A8 ATP-dependent Clp protease proteolytic subunit 4... 212 4e-54 UniRef50_Q47MU3 ATP-dependent Clp protease proteolytic subunit 1... 210 2e-53 UniRef50_Q5Z0M4 ATP-dependent Clp protease proteolytic subunit 1... 210 2e-53 UniRef50_Q9SAA2 ATP-dependent Clp protease proteolytic subunit 6... 209 4e-53 UniRef50_C7QFY1 ATP-dependent Clp protease proteolytic subunit n... 209 4e-53 UniRef50_C4R657 ATP-dependent Clp protease proteolytic subunit n... 206 3e-52 UniRef50_P56772 ATP-dependent Clp protease proteolytic subunit 1... 205 9e-52 UniRef50_D1BZJ7 ATP-dependent Clp protease proteolytic subunit n... 205 1e-51 UniRef50_Q94B60 ATP-dependent Clp protease proteolytic subunit 4... 204 2e-51 UniRef50_C1E717 ATP-dependent Clp protease proteolytic subunit n... 203 3e-51 UniRef50_Q8LB10 ATP-dependent Clp protease proteolytic subunit-r... 201 1e-50 UniRef50_Q9XJ36 ATP-dependent Clp protease proteolytic subunit-r... 200 3e-50 UniRef50_Q82CA5 ATP-dependent Clp protease proteolytic subunit 4... 199 7e-50 UniRef50_B3L4C3 ATP-dependent Clp protease proteolytic subunit n... 198 1e-49 UniRef50_C7JE62 ATP-dependent Clp protease proteolytic subunit n... 197 2e-49 UniRef50_P36387 ATP-dependent Clp protease proteolytic subunit n... 196 3e-49 UniRef50_UPI0001AF02E3 ATP-dependent Clp protease n=1 Tax=Strept... 196 4e-49 UniRef50_A6DMN5 ATP-dependent Clp protease proteolytic subunit n... 196 5e-49 UniRef50_D2Q440 Endopeptidase Clp n=5 Tax=Actinomycetales RepID=... 195 7e-49 UniRef50_Q72R01 ATP-dependent Clp protease proteolytic subunit 2... 194 2e-48 UniRef50_A7ATV1 ATP-dependent Clp protease proteolytic subunit n... 194 2e-48 UniRef50_Q2K5Q0 ATP-dependent Clp protease proteolytic subunit 3... 193 3e-48 UniRef50_C5C3N3 ATP-dependent Clp protease proteolytic subunit n... 193 4e-48 UniRef50_C1FE28 ATP-dependent Clp protease proteolytic subunit (... 192 4e-48 UniRef50_Q01F73 ATP-dependent Clp protease proteolytic subunit (... 192 7e-48 UniRef50_Q06J25 ATP-dependent Clp protease proteolytic subunit n... 191 1e-47 UniRef50_C1N254 ATP-dependent Clp protease proteolytic subunit n... 191 1e-47 UniRef50_Q7NEW1 ATP-dependent Clp protease proteolytic subunit 2... 190 3e-47 UniRef50_B8AMH6 ATP-dependent Clp protease proteolytic subunit n... 190 3e-47 UniRef50_A0LYF8 ATP-dependent Clp protease proteolytic subunit n... 189 5e-47 UniRef50_A7AQC7 ATP-dependent Clp protease proteolytic subunit n... 189 5e-47 UniRef50_O97252 ATP-dependent Clp protease proteolytic subunit n... 189 8e-47 UniRef50_Q6ME32 ATP-dependent Clp protease proteolytic subunit 1... 188 1e-46 UniRef50_Q9L4P4 Putative ATP-dependent Clp protease proteolytic ... 187 2e-46 UniRef50_Q1PYX1 ATP-dependent Clp protease proteolytic subunit n... 187 2e-46 UniRef50_A8INX1 ATP-dependent Clp protease proteolytic subunit n... 187 2e-46 UniRef50_Q73JM9 ATP-dependent Clp protease proteolytic subunit 2... 187 3e-46 UniRef50_B9F8Z4 ATP-dependent Clp protease proteolytic subunit n... 187 3e-46 UniRef50_Q36863 ATP-dependent Clp protease proteolytic subunit n... 187 3e-46 UniRef50_A4W647 ATP-dependent Clp protease proteolytic subunit n... 187 3e-46 UniRef50_B4WHH0 ATP-dependent Clp protease proteolytic subunit n... 186 3e-46 UniRef50_Q8UD57 ATP-dependent Clp protease proteolytic subunit 3... 186 5e-46 UniRef50_Q3LWG6 ATP-dependent Clp protease proteolytic subunit n... 186 5e-46 UniRef50_B9YN00 ATP-dependent Clp protease proteolytic subunit n... 185 6e-46 UniRef50_Q3AVC4 ATP-dependent Clp protease proteolytic subunit n... 185 8e-46 UniRef50_B0LP85 ATP-dependent Clp protease proteolytic subunit n... 185 8e-46 UniRef50_Q6C1Y5 ATP-dependent Clp protease proteolytic subunit n... 185 9e-46 UniRef50_Q06FP3 ATP-dependent Clp protease proteolytic subunit n... 183 3e-45 UniRef50_B1X4K7 ATP-dependent Clp protease proteolytic subunit n... 182 6e-45 UniRef50_O51698 ATP-dependent Clp protease proteolytic subunit 2... 182 8e-45 UniRef50_C9RRI3 ATP-dependent Clp protease proteolytic subunit n... 181 1e-44 UniRef50_Q06R14 ATP-dependent Clp protease proteolytic subunit n... 181 2e-44 UniRef50_C7N490 ATP-dependent Clp protease proteolytic subunit n... 180 2e-44 UniRef50_Q8L770 ATP-dependent Clp protease proteolytic subunit-r... 179 4e-44 UniRef50_B0LP81 ATP-dependent Clp protease proteolytic subunit n... 179 5e-44 UniRef50_D0L7Q6 ATP-dependent Clp protease proteolytic subunit n... 178 7e-44 UniRef50_B7FZS4 ATP-dependent Clp protease proteolytic subunit n... 178 7e-44 UniRef50_D1BUV7 ATP-dependent Clp protease proteolytic subunit n... 176 4e-43 UniRef50_Q4UAC9 ATP-dependent Clp protease proteolytic subunit n... 175 8e-43 UniRef50_A8IS47 ATP-dependent Clp protease proteolytic subunit n... 175 1e-42 UniRef50_Q9MTJ8 ATP-dependent Clp protease proteolytic subunit n... 175 1e-42 UniRef50_C5CQN7 ATP-dependent Clp protease proteolytic subunit n... 174 1e-42 UniRef50_B5A4F2 ATP-dependent Clp protease proteolytic subunit n... 174 2e-42 UniRef50_B0LN89 ATP-dependent Clp protease proteolytic subunit n... 174 2e-42 UniRef50_C5XH66 ATP-dependent Clp protease proteolytic subunit n... 173 3e-42 UniRef50_A9I409 ATP-dependent Clp protease proteolytic subunit n... 173 3e-42 UniRef50_Q3Z7J8 ATP-dependent Clp protease proteolytic subunit n... 173 4e-42 UniRef50_P48254 Putative ATP-dependent Clp protease proteolytic ... 172 6e-42 UniRef50_A4RSQ9 ATP-dependent Clp protease proteolytic subunit n... 172 9e-42 UniRef50_Q06SH9 ATP-dependent Clp protease proteolytic subunit n... 172 1e-41 UniRef50_Q5Z0M5 ATP-dependent Clp protease proteolytic subunit n... 171 1e-41 UniRef50_B4WHH1 ATP-dependent Clp protease proteolytic subunit n... 170 2e-41 UniRef50_D1Z6F0 ATP-dependent Clp protease proteolytic subunit n... 170 4e-41 UniRef50_B3LBC6 ATP-dependent Clp protease proteolytic subunit n... 166 4e-40 UniRef50_Q3LW65 ATP-dependent Clp protease proteolytic subunit n... 165 7e-40 UniRef50_B0LP79 ATP-dependent Clp protease proteolytic subunit n... 165 7e-40 UniRef50_B9HMY7 ATP-dependent Clp protease proteolytic subunit n... 164 1e-39 UniRef50_A4S2U0 ATP-dependent Clp protease proteolytic subunit n... 164 1e-39 UniRef50_B5YV95 ATP-dependent Clp protease proteolytic subunit n... 164 1e-39 UniRef50_UPI000196C506 hypothetical protein CATMIT_02666 n=1 Tax... 164 2e-39 UniRef50_Q9XJ35 ATP-dependent Clp protease proteolytic subunit-r... 164 2e-39 UniRef50_A4E7Q8 ATP-dependent Clp protease proteolytic subunit n... 163 3e-39 UniRef50_Q872F9 ATP-dependent Clp protease proteolytic subunit n... 161 1e-38 UniRef50_B2X1V4 ATP-dependent Clp protease proteolytic subunit n... 161 2e-38 UniRef50_C7Z253 ATP-dependent Clp protease proteolytic subunit n... 160 2e-38 UniRef50_Q2WGG1 ATP-dependent Clp protease proteolytic subunit (... 160 3e-38 UniRef50_A7FWE0 ATP-dependent Clp protease proteolytic subunit n... 159 4e-38 UniRef50_A0JQM5 ATP-dependent Clp protease proteolytic subunit n... 159 5e-38 UniRef50_C4KQ21 ATP-dependent Clp protease proteolytic subunit n... 159 6e-38 UniRef50_C5YWZ8 ATP-dependent Clp protease proteolytic subunit n... 159 6e-38 UniRef50_B5R8Q7 ATP-dependent Clp protease proteolytic subunit n... 158 9e-38 UniRef50_Q65ES6 ATP-dependent Clp protease proteolytic subunit n... 158 1e-37 UniRef50_B1X3L4 ATP-dependent Clp protease proteolytic subunit n... 158 1e-37 UniRef50_Q2VPX8 ATP-dependent Clp protease proteolytic subunit (... 158 2e-37 UniRef50_UPI0000DB7F4F PREDICTED: similar to Putative ATP-depend... 157 2e-37 UniRef50_C3WMS7 ATP-dependent Clp protease proteolytic subunit n... 157 2e-37 UniRef50_Q011H7 ATP-dependent Clp protease proteolytic subunit n... 157 2e-37 UniRef50_B0TCT9 ATP-dependent Clp protease proteolytic subunit n... 156 4e-37 UniRef50_A8IXD6 ATP-dependent Clp protease proteolytic subunit n... 156 5e-37 UniRef50_B7C8Y7 ATP-dependent Clp protease proteolytic subunit n... 156 5e-37 UniRef50_A4S2Q5 ATP-dependent Clp protease proteolytic subunit n... 155 1e-36 UniRef50_B0LNX5 ATP-dependent Clp protease proteolytic subunit n... 154 2e-36 UniRef50_A3DFX4 ATP-dependent Clp protease proteolytic subunit n... 153 2e-36 UniRef50_A3JIS6 ATP-dependent Clp protease proteolytic subunit n... 153 3e-36 UniRef50_B7HV38 ATP-dependent Clp protease proteolytic subunit n... 153 4e-36 UniRef50_C1D8G7 ATP-dependent Clp protease proteolytic subunit n... 153 4e-36 UniRef50_B0LNM7 ATP-dependent Clp protease proteolytic subunit n... 152 5e-36 UniRef50_B7ZIH9 ATP-dependent Clp protease proteolytic subunit n... 152 6e-36 UniRef50_B7UZW7 ATP-dependent Clp protease proteolytic subunit n... 152 7e-36 UniRef50_A3DG62 ATP-dependent Clp protease proteolytic subunit n... 152 7e-36 UniRef50_Q3Z3P3 ATP-dependent Clp protease proteolytic subunit n... 152 9e-36 UniRef50_C5CJP6 ATP-dependent Clp protease proteolytic subunit n... 151 2e-35 UniRef50_A8U7Z4 ATP-dependent Clp protease proteolytic subunit n... 150 2e-35 UniRef50_B2TQV1 ATP-dependent Clp protease proteolytic subunit n... 150 2e-35 UniRef50_C1ZNA8 ATP-dependent Clp protease proteolytic subunit n... 150 2e-35 UniRef50_B6G8S8 ATP-dependent Clp protease proteolytic subunit n... 150 3e-35 UniRef50_B9CLK4 ATP-dependent Clp protease proteolytic subunit n... 150 3e-35 UniRef50_A5KJS2 ATP-dependent Clp protease proteolytic subunit n... 149 4e-35 UniRef50_Q2NPI5 ClpP family protein n=3 Tax=unclassified Siphovi... 149 5e-35 UniRef50_C3WVP2 ATP-dependent Clp protease proteolytic subunit n... 149 6e-35 UniRef50_A8IH07 ATP-dependent Clp protease proteolytic subunit n... 149 6e-35 UniRef50_Q0AG16 ATP-dependent Clp protease proteolytic subunit n... 148 8e-35 UniRef50_C2KJ97 ATP-dependent Clp protease proteolytic subunit n... 148 8e-35 UniRef50_B7QPY3 ATP-dependent Clp protease proteolytic subunit n... 148 1e-34 UniRef50_B1BPQ5 ATP-dependent Clp protease proteolytic subunit n... 147 2e-34 UniRef50_B1JDT0 ATP-dependent Clp protease proteolytic subunit n... 147 2e-34 UniRef50_A3UVN6 ATP-dependent Clp protease proteolytic subunit n... 147 2e-34 UniRef50_A5F9J4 ATP-dependent Clp protease proteolytic subunit n... 147 3e-34 UniRef50_C4ML05 P05 n=1 Tax=Xanthomonas phage phiL7 RepID=C4ML05... 146 5e-34 UniRef50_C5R880 ATP-dependent Clp protease proteolytic subunit n... 145 6e-34 UniRef50_C2BG30 ATP-dependent Clp protease proteolytic subunit n... 145 6e-34 UniRef50_B1X3L5 ATP-dependent Clp protease proteolytic subunit n... 145 8e-34 UniRef50_B3JP66 ATP-dependent Clp protease proteolytic subunit n... 145 9e-34 UniRef50_A6N1Z7 Clp protease n=1 Tax=Microbacterium phage Min1 R... 145 1e-33 UniRef50_C7Q187 ATP-dependent Clp protease proteolytic subunit n... 145 1e-33 UniRef50_B8L012 Peptidase S14, ClpP n=1 Tax=Stenotrophomonas sp.... 144 2e-33 UniRef50_D1NE80 ATP-dependent Clp protease proteolytic subunit (... 144 2e-33 UniRef50_UPI0001B52F96 putative Clp protease n=1 Tax=Fusobacteri... 144 2e-33 UniRef50_A8Z285 ATP-dependent Clp protease proteolytic subunit n... 143 2e-33 UniRef50_Q72BY3 ClpP protease family protein n=2 Tax=Desulfovibr... 143 3e-33 UniRef50_C8VJ02 ATP-dependent Clp protease proteolytic subunit n... 143 3e-33 UniRef50_A5V8D3 ATP-dependent Clp protease proteolytic subunit n... 143 3e-33 UniRef50_A1VPI3 ATP-dependent Clp protease proteolytic subunit n... 142 6e-33 UniRef50_B8DAG3 ATP-dependent Clp protease proteolytic subunit n... 142 6e-33 UniRef50_B5A4F3 ATP-dependent Clp protease proteolytic subunit n... 142 6e-33 UniRef50_UPI0001B43327 serine protease n=1 Tax=Listeria monocyto... 142 6e-33 UniRef50_B7JPB9 ATP-dependent Clp protease proteolytic subunit n... 142 8e-33 UniRef50_A4J7R2 ATP-dependent Clp protease proteolytic subunit n... 142 8e-33 UniRef50_Q041N2 ATP-dependent Clp protease proteolytic subunit n... 142 9e-33 UniRef50_D0DKS7 ATP-dependent Clp protease proteolytic subunit n... 142 1e-32 UniRef50_D0J499 ATP-dependent Clp protease proteolytic subunit n... 141 1e-32 UniRef50_Q7P8G2 ATP-dependent Clp protease proteolytic subunit n... 141 1e-32 UniRef50_B8ILU4 ATP-dependent Clp protease proteolytic subunit n... 141 2e-32 UniRef50_B7IY99 ATP-dependent Clp protease proteolytic subunit n... 140 2e-32 UniRef50_B8D1N4 ATP-dependent Clp protease proteolytic subunit n... 140 2e-32 UniRef50_A7FXQ7 ATP-dependent Clp protease proteolytic subunit n... 140 3e-32 UniRef50_UPI0001BC4FF2 peptidase S14, ClpP n=1 Tax=Fusobacterium... 140 4e-32 UniRef50_A1WEU3 ATP-dependent Clp protease proteolytic subunit n... 139 5e-32 UniRef50_UPI0001BC65FA prophage LambdaBa02, Clp protease family ... 139 5e-32 UniRef50_A1VKV0 ATP-dependent Clp protease proteolytic subunit n... 139 6e-32 UniRef50_UPI0001C37221 ATP-dependent Clp protease, proteolytic s... 139 6e-32 UniRef50_B2V4L4 ATP-dependent Clp protease proteolytic subunit n... 139 6e-32 UniRef50_Q892G9 ATP-dependent Clp protease proteolytic subunit n... 139 6e-32 UniRef50_B9QT01 ATP-dependent Clp protease proteolytic subunit n... 138 8e-32 UniRef50_UPI0001B44862 Clp protease domain protein n=3 Tax=Liste... 138 1e-31 UniRef50_C1FD32 ATP-dependent Clp protease proteolytic subunit n... 138 2e-31 UniRef50_B2KDB1 ATP-dependent Clp protease proteolytic subunit n... 137 2e-31 UniRef50_A3X5R0 ATP-dependent Clp protease proteolytic subunit n... 137 3e-31 UniRef50_C8RQH1 ATP-dependent Clp protease proteolytic subunit n... 136 4e-31 UniRef50_B1MZD0 ATP-dependent Clp protease proteolytic subunit n... 136 5e-31 UniRef50_A3LLS6 Putative uncharacterized protein n=1 Tax=Pseudom... 135 6e-31 UniRef50_Q3RAG5 ATP-dependent Clp protease proteolytic subunit n... 135 8e-31 UniRef50_A5Z441 Putative uncharacterized protein n=1 Tax=Eubacte... 135 8e-31 UniRef50_Q3EL78 ATP-dependent Clp protease proteolytic subunit n... 135 8e-31 UniRef50_Q88IF4 ATP-dependent Clp protease proteolytic subunit n... 135 9e-31 UniRef50_A5ZPL9 ATP-dependent Clp protease proteolytic subunit n... 135 1e-30 UniRef50_C9ZCK7 ATP-dependent Clp protease proteolytic subunit n... 135 1e-30 UniRef50_C4FX34 ATP-dependent Clp protease proteolytic subunit n... 135 1e-30 UniRef50_B3EUB4 Peptidase S14 ClpP n=1 Tax=Candidatus Amoebophil... 134 2e-30 UniRef50_Q4UBQ0 ATP-dependent Clp protease proteolytic subunit n... 134 2e-30 UniRef50_A9APU6 ATP-dependent Clp protease proteolytic subunit n... 133 3e-30 UniRef50_C4WDN9 ATP-dependent Clp protease proteolytic subunit n... 133 3e-30 UniRef50_A7GI71 ATP-dependent Clp protease proteolytic subunit n... 133 3e-30 UniRef50_Q2K642 Probable Clp protease protein n=1 Tax=Rhizobium ... 133 3e-30 UniRef50_C2PNQ2 ATP-dependent Clp protease proteolytic subunit n... 133 3e-30 UniRef50_B1RAB0 ATP-dependent Clp protease proteolytic subunit n... 133 3e-30 UniRef50_C3WBA5 ATP-dependent Clp protease proteolytic subunit n... 133 5e-30 UniRef50_C9L4D7 ATP-dependent Clp protease proteolytic subunit n... 132 5e-30 UniRef50_A9C2D1 ATP-dependent Clp protease proteolytic subunit n... 132 6e-30 UniRef50_A8GLM2 ATP-dependent Clp protease proteolytic subunit n... 132 6e-30 UniRef50_C7D0Z8 ATP-dependent Clp protease proteolytic subunit n... 132 6e-30 UniRef50_A3F644 Head maturation protease n=3 Tax=root RepID=A3F6... 132 6e-30 UniRef50_A8SI37 Putative uncharacterized protein n=1 Tax=Parvimo... 132 7e-30 UniRef50_B2Y1Y4 ATP-dependent Clp protease proteolytic subunit n... 131 9e-30 UniRef50_C4GAS5 ATP-dependent Clp protease proteolytic subunit n... 131 1e-29 UniRef50_A8RU31 ATP-dependent Clp protease proteolytic subunit n... 131 1e-29 UniRef50_C3WAW3 ATP-dependent Clp protease proteolytic subunit n... 131 1e-29 UniRef50_C6VLG0 ATP-dependent Clp protease proteolytic subunit n... 131 1e-29 UniRef50_Q1QKR7 ATP-dependent Clp protease proteolytic subunit n... 131 1e-29 UniRef50_C7XJ21 ATP-dependent Clp protease, proteolytic subunit ... 131 2e-29 UniRef50_Q03FG4 Protease subunit of ATP-dependent Clp protease n... 131 2e-29 UniRef50_B2V2A3 Peptidase S14, ClpP n=1 Tax=Clostridium botulinu... 130 3e-29 UniRef50_A5ZRV6 ATP-dependent Clp protease proteolytic subunit n... 130 4e-29 UniRef50_B6FWW7 ATP-dependent Clp protease proteolytic subunit n... 129 7e-29 UniRef50_Q5NXH6 ATP-dependent Clp protease proteolytic subunit n... 129 7e-29 UniRef50_B0NDG2 ATP-dependent Clp protease proteolytic subunit n... 128 1e-28 UniRef50_A5BHP1 ATP-dependent Clp protease proteolytic subunit n... 127 2e-28 UniRef50_Q3SSD7 ATP-dependent Clp protease proteolytic subunit n... 126 3e-28 UniRef50_B0MY38 ATP-dependent Clp protease proteolytic subunit n... 126 4e-28 UniRef50_D1ZWV1 ATP-dependent Clp protease proteolytic subunit (... 125 7e-28 UniRef50_B9K2S2 ATP-dependent Clp protease proteolytic subunit n... 125 1e-27 UniRef50_B4D6M6 Peptidase S14 ClpP n=1 Tax=Chthoniobacter flavus... 125 1e-27 UniRef50_D2LX80 Peptidase S14 ClpP n=1 Tax=Bacillus cellulosilyt... 125 1e-27 UniRef50_UPI00017450C3 ATP-dependent Clp protease proteolytic su... 124 2e-27 UniRef50_C0A810 Peptidase S14 ClpP n=1 Tax=Opitutaceae bacterium... 123 3e-27 UniRef50_A5TX35 Endopeptidase Clp n=1 Tax=Fusobacterium nucleatu... 123 3e-27 UniRef50_Q6J1Y3 Putative ClpP-like protease n=1 Tax=Lactobacillu... 123 4e-27 UniRef50_A8W9Z5 Gp7 n=1 Tax=Mycobacterium phage Giles RepID=A8W9... 123 4e-27 Sequences not found previously or not previously below threshold: >UniRef50_C4K4P2 ATP-dependent Clp protease proteolytic subunit n=300 Tax=cellular organisms RepID=CLPP_HAMD5 Length = 215 Score = 262 bits (671), Expect = 4e-69, Method: Composition-based stats. Identities = 165/207 (79%), Positives = 186/207 (89%) Query: 1 MSYSGERDNFAPHMALVPMVIEQTSRGERSFDIYSRLLKERVIFLTGQVEDHMANLIVAQ 60 MS E++ P M LVPMV+EQTSRGER++DIYSR+LKERVIFLTGQVE+HMANLIVAQ Sbjct: 1 MSSFDEQNTRLPSMTLVPMVVEQTSRGERAYDIYSRMLKERVIFLTGQVEEHMANLIVAQ 60 Query: 61 MLFLEAENPEKDIYLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAG 120 MLFLEAENPEKDIYLYINSPGGVITAGMSIYDTMQFI PDVSTIC+GQA SMGAFLL AG Sbjct: 61 MLFLEAENPEKDIYLYINSPGGVITAGMSIYDTMQFITPDVSTICIGQACSMGAFLLAAG 120 Query: 121 AKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREILKVKGRMNELMALHTGQSLEQIER 180 AK KR+CLPN+RVMIHQPLGG+QGQA+DIEIHA+EILKVK RMN+LMA+HT ++L+ IE+ Sbjct: 121 AKSKRYCLPNARVMIHQPLGGFQGQASDIEIHAKEILKVKKRMNDLMAIHTKKTLKIIEK 180 Query: 181 DTERDRFLSAPEAVEYGLVDSILTHRN 207 DTERD FLSA EA +YGLVD +LT R Sbjct: 181 DTERDHFLSAEEAKKYGLVDCVLTERK 207 >UniRef50_D0MF29 ATP-dependent Clp protease proteolytic subunit n=3 Tax=Bacteria RepID=D0MF29_RHOM4 Length = 252 Score = 259 bits (661), Expect = 5e-68, Method: Composition-based stats. Identities = 127/206 (61%), Positives = 165/206 (80%), Gaps = 2/206 (0%) Query: 3 YSGERDNFAPHMALVPMVIEQTSRGERSFDIYSRLLKERVIFLTGQVEDHMANLIVAQML 62 YSG + P ALVP+VIEQT+RGER++DI+SRLLKER++ + + D +ANL+VAQ+L Sbjct: 24 YSGPFQQY-PVGALVPIVIEQTTRGERAYDIFSRLLKERIVIIGTPINDQIANLVVAQLL 82 Query: 63 FLEAENPEKDIYLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAK 122 +L +E+ E+DI +YINSPGG I +G+++YDTMQ++ P V+TIC+G AASMGA LL AG K Sbjct: 83 WLASEDSERDINIYINSPGGSIDSGLAVYDTMQYVAPPVATICVGLAASMGAVLLAAGVK 142 Query: 123 GKRFCLPNSRVMIHQPL-GGYQGQATDIEIHAREILKVKGRMNELMALHTGQSLEQIERD 181 GKR LPNSR+MIHQP G QGQATDIEIHAREILK++ R+NE++A HTGQ E+I +D Sbjct: 143 GKRAALPNSRIMIHQPWMSGVQGQATDIEIHAREILKMRERLNEILAYHTGQPKERIAQD 202 Query: 182 TERDRFLSAPEAVEYGLVDSILTHRN 207 +RD +LSA EA EYGLVD++LT R Sbjct: 203 VDRDFWLSAQEAKEYGLVDNVLTPRR 228 >UniRef50_A4JF05 ATP-dependent Clp protease proteolytic subunit n=49 Tax=cellular organisms RepID=CLPP_BURVG Length = 217 Score = 258 bits (660), Expect = 7e-68, Method: Composition-based stats. Identities = 136/206 (66%), Positives = 171/206 (83%) Query: 1 MSYSGERDNFAPHMALVPMVIEQTSRGERSFDIYSRLLKERVIFLTGQVEDHMANLIVAQ 60 ++ + + A + LVP+V+E + RGERS+DIYSRLLKER++F+ G+V D ANL+VAQ Sbjct: 11 LASNAPQGFEAQALGLVPIVVETSGRGERSYDIYSRLLKERLVFMVGEVNDQTANLVVAQ 70 Query: 61 MLFLEAENPEKDIYLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAG 120 +LFLE+ENP+KDI LYINSPGG ++AGM+IYDTMQFIKPDVST+CMG AASMGAFLL +G Sbjct: 71 LLFLESENPDKDISLYINSPGGSVSAGMAIYDTMQFIKPDVSTLCMGLAASMGAFLLASG 130 Query: 121 AKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREILKVKGRMNELMALHTGQSLEQIER 180 AKGKRF LPNSRVMIHQPLGG +GQA+DIEI AREIL +K R+N L+A HTGQ +E+I R Sbjct: 131 AKGKRFALPNSRVMIHQPLGGARGQASDIEIQAREILYLKERLNNLLAQHTGQDVERIAR 190 Query: 181 DTERDRFLSAPEAVEYGLVDSILTHR 206 DT+RD F+S+ +A YGL+D +L R Sbjct: 191 DTDRDNFMSSDDAKAYGLIDQVLLKR 216 >UniRef50_Q7V992 ATP-dependent Clp protease proteolytic subunit 1 n=12 Tax=Bacteria RepID=CLPP1_PROMM Length = 224 Score = 258 bits (659), Expect = 1e-67, Method: Composition-based stats. Identities = 127/203 (62%), Positives = 158/203 (77%), Gaps = 2/203 (0%) Query: 3 YSGERDNFAPHMALVPMVIEQTSRGERSFDIYSRLLKERVIFLTGQVEDHMANLIVAQML 62 + G R +P ++P V+EQ+ RGER+FDIYSRLL+ER+IFL V+D +A+ +VAQML Sbjct: 14 WQGIRPVSSP--GILPTVVEQSGRGERAFDIYSRLLRERIIFLGTGVDDQVADALVAQML 71 Query: 63 FLEAENPEKDIYLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAK 122 FLEAE+PEKDI +YINSPGG +TAG++IYDTMQ + PDV TIC G AASMGAFLL G K Sbjct: 72 FLEAEDPEKDIQIYINSPGGSVTAGLAIYDTMQQVAPDVVTICYGLAASMGAFLLCGGTK 131 Query: 123 GKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREILKVKGRMNELMALHTGQSLEQIERDT 182 GKR LPN+R+MIHQPLGG QGQA DIEI A+EIL +K +N L+A HTGQ L +I DT Sbjct: 132 GKRLALPNARIMIHQPLGGAQGQAVDIEIQAKEILFLKETLNGLLAEHTGQPLNKIAEDT 191 Query: 183 ERDRFLSAPEAVEYGLVDSILTH 205 +RD FLS +AVEYGL+D ++ Sbjct: 192 DRDHFLSPAKAVEYGLIDRVVDS 214 >UniRef50_Q1RJH2 ATP-dependent Clp protease proteolytic subunit n=280 Tax=cellular organisms RepID=CLPP_RICBR Length = 227 Score = 256 bits (653), Expect = 5e-67, Method: Composition-based stats. Identities = 132/194 (68%), Positives = 167/194 (86%) Query: 14 MALVPMVIEQTSRGERSFDIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDI 73 M+ VP+VIEQTSRGER++DIYSRLLKER+IF+ G +EDHMANLI AQ+LFLEAENPEKDI Sbjct: 23 MSYVPIVIEQTSRGERAYDIYSRLLKERIIFVCGPIEDHMANLITAQLLFLEAENPEKDI 82 Query: 74 YLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRV 133 Y+YINSPGGV+TAG++IYDTMQ+IKP V+T+C+GQA SMG+FLL G KG R+ LP+SRV Sbjct: 83 YMYINSPGGVVTAGLAIYDTMQYIKPKVATLCIGQACSMGSFLLCGGEKGMRYSLPHSRV 142 Query: 134 MIHQPLGGYQGQATDIEIHAREILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEA 193 MIHQP GGY+GQATDIEIHA+E LK+K +N L + HTGQ ++ +E+ ERD F+S EA Sbjct: 143 MIHQPSGGYRGQATDIEIHAQETLKIKKILNSLYSKHTGQDVKHVEKSMERDNFMSPEEA 202 Query: 194 VEYGLVDSILTHRN 207 ++G++D I+THR+ Sbjct: 203 KKFGIIDKIITHRD 216 >UniRef50_A8H614 ATP-dependent Clp protease proteolytic subunit n=35 Tax=Bacteria RepID=CLPP_SHEPA Length = 203 Score = 255 bits (651), Expect = 8e-67, Method: Composition-based stats. Identities = 148/200 (74%), Positives = 177/200 (88%) Query: 7 RDNFAPHMALVPMVIEQTSRGERSFDIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEA 66 + + ALVPMV+EQT++GERS+DIYSRLLKERVIFL GQVE+HMANLIVAQ+LFLE+ Sbjct: 3 KAPESVLNALVPMVVEQTAKGERSYDIYSRLLKERVIFLVGQVEEHMANLIVAQLLFLES 62 Query: 67 ENPEKDIYLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRF 126 E+P+KDIYLYINSPGG +TAGM+IYDTMQFIKP+VST+C+GQAASMGAFLL GA+GKR Sbjct: 63 ESPDKDIYLYINSPGGSVTAGMAIYDTMQFIKPNVSTVCIGQAASMGAFLLAGGAEGKRH 122 Query: 127 CLPNSRVMIHQPLGGYQGQATDIEIHAREILKVKGRMNELMALHTGQSLEQIERDTERDR 186 CLPNSRVMIHQPLGG+QGQA+DI IHA+EIL +K ++N ++A HTGQ LE IERDT+RD Sbjct: 123 CLPNSRVMIHQPLGGFQGQASDIAIHAQEILGIKNKLNTMLAEHTGQPLEVIERDTDRDN 182 Query: 187 FLSAPEAVEYGLVDSILTHR 206 F+SA EA EYGLVDS++ R Sbjct: 183 FMSATEAAEYGLVDSVIAKR 202 >UniRef50_A5W635 ATP-dependent Clp protease proteolytic subunit n=55 Tax=cellular organisms RepID=CLPP_PSEP1 Length = 213 Score = 255 bits (651), Expect = 9e-67, Method: Composition-based stats. Identities = 155/205 (75%), Positives = 177/205 (86%) Query: 2 SYSGERDNFAPHMALVPMVIEQTSRGERSFDIYSRLLKERVIFLTGQVEDHMANLIVAQM 61 SY + + LVPMVIEQ++RGER++DIYSRLLKERVIFL G VED+MANL+VAQ+ Sbjct: 5 SYIQQSSDIQAAGGLVPMVIEQSARGERAYDIYSRLLKERVIFLVGPVEDYMANLVVAQL 64 Query: 62 LFLEAENPEKDIYLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGA 121 LFLEAENP+KDI+LYINSPGG +TAGMSIYDTMQFIKPDVSTIC+GQA SMGAFLL AGA Sbjct: 65 LFLEAENPDKDIHLYINSPGGSVTAGMSIYDTMQFIKPDVSTICIGQACSMGAFLLAAGA 124 Query: 122 KGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREILKVKGRMNELMALHTGQSLEQIERD 181 KGKR CLPNSRVMIHQPLGG+QGQATDIEIHA+EIL +K R+NEL+A HTGQ LE I+RD Sbjct: 125 KGKRHCLPNSRVMIHQPLGGFQGQATDIEIHAQEILNIKARLNELLAYHTGQDLETIKRD 184 Query: 182 TERDRFLSAPEAVEYGLVDSILTHR 206 TERD F+SA A EYGL+DS+ R Sbjct: 185 TERDNFMSASRAAEYGLIDSVYDKR 209 >UniRef50_Q11J60 ATP-dependent Clp protease proteolytic subunit 1 n=24 Tax=cellular organisms RepID=CLPP1_MESSB Length = 210 Score = 254 bits (648), Expect = 2e-66, Method: Composition-based stats. Identities = 126/200 (63%), Positives = 164/200 (82%) Query: 7 RDNFAPHMALVPMVIEQTSRGERSFDIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEA 66 ++ M LVPMV+EQT+RGER++DI+SRLLKER+IF+TG VED MA L+ AQ+LFLEA Sbjct: 2 KNPVETAMNLVPMVVEQTNRGERAYDIFSRLLKERIIFITGPVEDGMATLVCAQLLFLEA 61 Query: 67 ENPEKDIYLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRF 126 ENP+K+I LYINSPGGV+T+GM+IYDTMQFI+P VST+C+GQAASMG+ LL AG K RF Sbjct: 62 ENPKKEIALYINSPGGVVTSGMAIYDTMQFIQPPVSTLCIGQAASMGSLLLCAGHKDMRF 121 Query: 127 CLPNSRVMIHQPLGGYQGQATDIEIHAREILKVKGRMNELMALHTGQSLEQIERDTERDR 186 PN+RVM+HQP GG+QGQA+DIE HA++I+K+K R+NE+ HTGQ + IER +RD Sbjct: 122 ATPNARVMVHQPSGGFQGQASDIERHAQDIIKLKRRLNEIYVKHTGQDYDTIERTLDRDH 181 Query: 187 FLSAPEAVEYGLVDSILTHR 206 F++A EA +GLVD +++ R Sbjct: 182 FMTADEAQAFGLVDRVISER 201 >UniRef50_Q8DJZ9 ATP-dependent Clp protease proteolytic subunit 2 n=20 Tax=cellular organisms RepID=CLPP2_THEEB Length = 198 Score = 253 bits (646), Expect = 3e-66, Method: Composition-based stats. Identities = 118/193 (61%), Positives = 148/193 (76%), Gaps = 1/193 (0%) Query: 15 ALVPMVIEQTSRGERSFDIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIY 74 VP + + DIY+RL +ER+IFL +V+D +AN IVA ML+L++E+P KDI Sbjct: 6 PKVPYRLPGEPYTQ-WIDIYNRLYRERIIFLGKEVDDEIANQIVAVMLYLDSEDPGKDIM 64 Query: 75 LYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVM 134 LYINSPGG +TAGM+IYDTMQ IK DV TIC+G AASMG+FLL AG KGKR LP+SR+M Sbjct: 65 LYINSPGGSVTAGMAIYDTMQHIKSDVVTICVGLAASMGSFLLAAGTKGKRLALPHSRIM 124 Query: 135 IHQPLGGYQGQATDIEIHAREILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEAV 194 IHQP GG +GQATDIEI AREIL+V+ ++NEL A HTGQ LE+IERD +RD F+SA EA Sbjct: 125 IHQPSGGTRGQATDIEIEAREILRVRRQLNELYAYHTGQPLEKIERDMDRDFFMSAEEAK 184 Query: 195 EYGLVDSILTHRN 207 YGL+D ++ R+ Sbjct: 185 NYGLIDRVIEERS 197 >UniRef50_C9KKA6 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Mitsuokella multacida DSM 20544 RepID=C9KKA6_9FIRM Length = 199 Score = 251 bits (642), Expect = 8e-66, Method: Composition-based stats. Identities = 121/187 (64%), Positives = 162/187 (86%) Query: 19 MVIEQTSRGERSFDIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYIN 78 MV+E+++ GER++DIYSRLLK+R+IFL G ++D +AN +VAQ+LFLE+E+P+KDI+LYIN Sbjct: 1 MVVERSNTGERAYDIYSRLLKDRIIFLGGPIDDAVANTVVAQLLFLESEDPDKDIHLYIN 60 Query: 79 SPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQP 138 SPGGV+TAG++IYDTMQ+IKPDVSTIC+GQAASMGA LLTAGAKGKR+ LPN+R+MIHQP Sbjct: 61 SPGGVVTAGLAIYDTMQYIKPDVSTICIGQAASMGALLLTAGAKGKRYALPNARIMIHQP 120 Query: 139 LGGYQGQATDIEIHAREILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEAVEYGL 198 LGG QGQ+TDI+I AREI +++ +N+++ TG+ E + +DTERD F++A EA YGL Sbjct: 121 LGGAQGQSTDIQIQAREIQRIREVINDILVESTGKDRETVVQDTERDNFMTAEEAKAYGL 180 Query: 199 VDSILTH 205 VD ++T Sbjct: 181 VDEVITR 187 >UniRef50_Q2G3T3 ATP-dependent Clp protease proteolytic subunit n=127 Tax=root RepID=CLPP_NOVAD Length = 235 Score = 251 bits (642), Expect = 1e-65, Method: Composition-based stats. Identities = 127/203 (62%), Positives = 167/203 (82%) Query: 4 SGERDNFAPHMALVPMVIEQTSRGERSFDIYSRLLKERVIFLTGQVEDHMANLIVAQMLF 63 G+ AL+P+V+EQ+SRGERSFDIYSRLL+ER+IF+TG+VEDHMA++I+AQ+LF Sbjct: 16 QGKFTTDPVTGALIPVVVEQSSRGERSFDIYSRLLRERIIFVTGEVEDHMASVIIAQLLF 75 Query: 64 LEAENPEKDIYLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKG 123 LE+ENP KDI +YINSPGGV+TAG++IYDTMQ+I+P VST+C+GQAASMG+FLL AG G Sbjct: 76 LESENPSKDISMYINSPGGVVTAGLAIYDTMQYIRPRVSTVCIGQAASMGSFLLAAGEPG 135 Query: 124 KRFCLPNSRVMIHQPLGGYQGQATDIEIHAREILKVKGRMNELMALHTGQSLEQIERDTE 183 R LPN+R+MIHQP GG +G A+DIEI AREIL+++ RMN+L TG+SL++IE+ + Sbjct: 136 MRIALPNARIMIHQPSGGARGMASDIEIQAREILRIRKRMNDLYVKFTGRSLDEIEKAMD 195 Query: 184 RDRFLSAPEAVEYGLVDSILTHR 206 RD FL A EA+++GLVD + R Sbjct: 196 RDTFLEAEEAMKFGLVDKVFESR 218 >UniRef50_O34125 ATP-dependent Clp protease proteolytic subunit 2 n=151 Tax=cellular organisms RepID=CLPP2_SYNE7 Length = 240 Score = 249 bits (636), Expect = 4e-65, Method: Composition-based stats. Identities = 129/193 (66%), Positives = 158/193 (81%) Query: 13 HMALVPMVIEQTSRGERSFDIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKD 72 A+VP V+EQ+ RGER+FDIYSRLL+ER++FL V+D +A+ IVAQ+LFLEAE+PEKD Sbjct: 34 SQAIVPTVVEQSGRGERAFDIYSRLLRERIVFLGTGVDDAVADSIVAQLLFLEAEDPEKD 93 Query: 73 IYLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSR 132 I LYINSPGG +TAGM+IYDTMQ + PDV+TIC G AASMGAFLL+ GA+GKR LP++R Sbjct: 94 IQLYINSPGGSVTAGMAIYDTMQQVAPDVATICFGLAASMGAFLLSGGAQGKRMALPSAR 153 Query: 133 VMIHQPLGGYQGQATDIEIHAREILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPE 192 +MIHQPLGG QGQA DIEI AREIL K +N+L+A HTGQ LE+IE DT+RD F+S E Sbjct: 154 IMIHQPLGGAQGQAVDIEIQAREILYHKSTLNDLLAQHTGQPLEKIEVDTDRDFFMSPEE 213 Query: 193 AVEYGLVDSILTH 205 A YGL+D +LT Sbjct: 214 AKAYGLIDQVLTR 226 >UniRef50_Q1PW15 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1PW15_9BACT Length = 224 Score = 247 bits (630), Expect = 2e-64, Method: Composition-based stats. Identities = 110/206 (53%), Positives = 152/206 (73%), Gaps = 4/206 (1%) Query: 4 SGERDNFAPHMA----LVPMVIEQTSRGERSFDIYSRLLKERVIFLTGQVEDHMANLIVA 59 +G + +P M VP V+E+T GER +DI+SRLLK+R+IF+ +ED + NL++A Sbjct: 11 NGAFPDVSPQMKQGALFVPYVVEKTGHGERHYDIFSRLLKDRIIFIGSAIEDTLTNLVIA 70 Query: 60 QMLFLEAENPEKDIYLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTA 119 Q+LFL+ EN +DI +YINSPGG ITAG++IYDTMQF++ DV+T C+GQA SM A LL Sbjct: 71 QILFLQNENKNQDINIYINSPGGSITAGLAIYDTMQFVQCDVATFCIGQAYSMAAILLAG 130 Query: 120 GAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREILKVKGRMNELMALHTGQSLEQIE 179 G K KRF LP++R+M+HQP GG +G ATDI I A EILK+K +NE++ HTGQ LE+IE Sbjct: 131 GTKNKRFGLPHTRIMLHQPWGGMRGTATDISIQAEEILKMKKCLNEILVKHTGQPLERIE 190 Query: 180 RDTERDRFLSAPEAVEYGLVDSILTH 205 D +RD ++S+ +A EYGL+D ++ Sbjct: 191 ADVDRDFYMSSHDAKEYGLIDEVIES 216 >UniRef50_Q2RZ59 ATP-dependent Clp protease proteolytic subunit 2 n=82 Tax=Bacteria RepID=CLPP2_SALRD Length = 233 Score = 244 bits (624), Expect = 1e-63, Method: Composition-based stats. Identities = 119/197 (60%), Positives = 155/197 (78%) Query: 11 APHMALVPMVIEQTSRGERSFDIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPE 70 P LVPMV+EQT+RGER++DI+SRLLKER++F+ + D +ANL VAQ+L+L +E+ E Sbjct: 16 QPMSGLVPMVVEQTTRGERAYDIFSRLLKERIVFIGTPINDQIANLTVAQLLYLASESSE 75 Query: 71 KDIYLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPN 130 K I LYINSPGGVI +G+ +YDTMQ+I VSTIC+G AASMG+ LL AG R CLPN Sbjct: 76 KPINLYINSPGGVIYSGLGVYDTMQYIGAPVSTICVGLAASMGSVLLAAGEDDSRACLPN 135 Query: 131 SRVMIHQPLGGYQGQATDIEIHAREILKVKGRMNELMALHTGQSLEQIERDTERDRFLSA 190 SRVMIHQP+GG +GQA+DIEI A EI+ +K R+ E++ALHTGQ ++QIE D +R+ ++SA Sbjct: 136 SRVMIHQPMGGAEGQASDIEIQAEEIMWLKERLYEILALHTGQDIDQIEADADRNYWMSA 195 Query: 191 PEAVEYGLVDSILTHRN 207 EA EYGLVD++L N Sbjct: 196 EEAEEYGLVDNVLNPDN 212 >UniRef50_A6Q675 ATP-dependent Clp protease proteolytic subunit n=60 Tax=cellular organisms RepID=CLPP_SULNB Length = 195 Score = 244 bits (623), Expect = 1e-63, Method: Composition-based stats. Identities = 125/192 (65%), Positives = 166/192 (86%) Query: 14 MALVPMVIEQTSRGERSFDIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDI 73 M+ +P V+EQT RGERS+DIYSRLLK+R+I L+G+V D +A+ IVAQ+LFLEA++P+KDI Sbjct: 1 MSYIPYVVEQTGRGERSYDIYSRLLKDRIIMLSGEVNDQVASSIVAQLLFLEAQDPDKDI 60 Query: 74 YLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRV 133 Y YINSPGGVIT+G+S++DTM +IKPD+ TIC+GQAASMGAFLL +G KGKR+ LP++R+ Sbjct: 61 YFYINSPGGVITSGLSMFDTMNYIKPDIVTICIGQAASMGAFLLASGTKGKRYALPHARI 120 Query: 134 MIHQPLGGYQGQATDIEIHAREILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEA 193 MIHQP GG QGQ+TDI+I A+EI ++K +NE+MA TG++ ++IE+DTERD F+SA EA Sbjct: 121 MIHQPSGGAQGQSTDIQIQAQEIQRLKDTLNEIMAEKTGKTAKRIEKDTERDNFMSAKEA 180 Query: 194 VEYGLVDSILTH 205 VEYGL+D +LT Sbjct: 181 VEYGLIDKVLTK 192 >UniRef50_Q9S834 ATP-dependent Clp protease proteolytic subunit 5, chloroplastic n=29 Tax=cellular organisms RepID=CLPP5_ARATH Length = 298 Score = 243 bits (620), Expect = 3e-63, Method: Composition-based stats. Identities = 112/207 (54%), Positives = 147/207 (71%), Gaps = 4/207 (1%) Query: 3 YSGERDNFAPHMALVPMVIEQTSR----GERSFDIYSRLLKERVIFLTGQVEDHMANLIV 58 +S D P P + ER I S+L + R+I G V+D MAN+IV Sbjct: 81 WSIRDDLQVPSSPYFPAYAQGQGPPPMVQERFQSIISQLFQYRIIRCGGAVDDDMANIIV 140 Query: 59 AQMLFLEAENPEKDIYLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLT 118 AQ+L+L+A +P KDI +Y+NSPGG +TAGM+I+DTM+ I+PDVST+C+G AASMGAFLL+ Sbjct: 141 AQLLYLDAVDPTKDIVMYVNSPGGSVTAGMAIFDTMRHIRPDVSTVCVGLAASMGAFLLS 200 Query: 119 AGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREILKVKGRMNELMALHTGQSLEQI 178 AG KGKR+ LPNSR+MIHQPLGG QG TDI+I A E+L K +N +A HTGQSLE+I Sbjct: 201 AGTKGKRYSLPNSRIMIHQPLGGAQGGQTDIDIQANEMLHHKANLNGYLAYHTGQSLEKI 260 Query: 179 ERDTERDRFLSAPEAVEYGLVDSILTH 205 +DT+RD F+SA EA EYGL+D ++ + Sbjct: 261 NQDTDRDFFMSAKEAKEYGLIDGVIMN 287 >UniRef50_Q0CXE7 ATP-dependent Clp protease proteolytic subunit n=15 Tax=Dikarya RepID=Q0CXE7_ASPTN Length = 258 Score = 243 bits (620), Expect = 3e-63, Method: Composition-based stats. Identities = 113/204 (55%), Positives = 152/204 (74%), Gaps = 6/204 (2%) Query: 9 NFAPHMALVP--MVIEQTSRGERSFDIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEA 66 N +P A P V E G ++DI+SRLLKER+I L G+V++ M+ IVAQ+LFLEA Sbjct: 38 NTSPPRAWTPTPFVTETVGGGWHTYDIFSRLLKERIICLNGEVDETMSASIVAQLLFLEA 97 Query: 67 ENPEKDIYLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRF 126 +NP+K I+LYINSPGG +TAG++IYDTM +I VSTIC+GQAASMG+ LL G GKR+ Sbjct: 98 DNPQKPIHLYINSPGGSVTAGLAIYDTMTYIASPVSTICVGQAASMGSLLLCGGHPGKRY 157 Query: 127 CLPNSRVMIHQPLGGYQGQATDIEIHAREILKVKGRMNELMALH-TGQ---SLEQIERDT 182 CLP+S +M+HQP GGY GQA+DI IHA+EIL+V+ ++N++ H TG+ SLE+IE+ Sbjct: 158 CLPHSSIMMHQPSGGYFGQASDIAIHAKEILRVREQLNKIYKRHLTGKKEMSLEEIEKLM 217 Query: 183 ERDRFLSAPEAVEYGLVDSILTHR 206 ERD F+ A EA++ G+VD +L R Sbjct: 218 ERDYFMGAKEALDMGIVDEVLDRR 241 >UniRef50_D0WES0 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Slackia exigua ATCC 700122 RepID=D0WES0_9ACTN Length = 255 Score = 242 bits (617), Expect = 6e-63, Method: Composition-based stats. Identities = 111/194 (57%), Positives = 148/194 (76%), Gaps = 2/194 (1%) Query: 15 ALVPMVIEQTSRGERSFDIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIY 74 +P VIEQ+ RGERS+DIYSRLL +R++FL ++D +AN++VAQ+L LE+ +PEKDI Sbjct: 55 YTIPYVIEQSPRGERSYDIYSRLLNDRIVFLGDAIDDGVANIVVAQLLHLESSDPEKDIS 114 Query: 75 LYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVM 134 LYINSPGG ++AG++IYD MQFI+ DVST+C+G AASM + L AGA GKRF PNS++M Sbjct: 115 LYINSPGGSVSAGLAIYDAMQFIRCDVSTVCLGMAASMASVLTAAGAPGKRFVTPNSQIM 174 Query: 135 IHQPLGGYQG--QATDIEIHAREILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPE 192 IHQP+GG Q TD +I A E+ K + R+ L+A HTG+++EQI D+ERD +L+A E Sbjct: 175 IHQPMGGSGERTQQTDFDILANEMRKTRDRLEGLLATHTGKTVEQIHADSERDHWLTAEE 234 Query: 193 AVEYGLVDSILTHR 206 A YGLVD I+T R Sbjct: 235 AKAYGLVDDIITSR 248 >UniRef50_Q7UK66 ATP-dependent Clp protease proteolytic subunit 2 n=27 Tax=cellular organisms RepID=CLPP2_RHOBA Length = 195 Score = 241 bits (615), Expect = 1e-62, Method: Composition-based stats. Identities = 123/194 (63%), Positives = 159/194 (81%) Query: 14 MALVPMVIEQTSRGERSFDIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDI 73 M ++P V+E R ER++DIYSRLLK+R+IFL QV+D ++N +VAQMLFL+A++P+KDI Sbjct: 1 MPVIPYVVESNGREERTYDIYSRLLKDRIIFLGQQVDDQISNALVAQMLFLQADDPKKDI 60 Query: 74 YLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRV 133 ++YINSPGG ITAGM+IYDTMQF+ DV+T C+GQAASMGA LLTAGAKGKRF LPN+R+ Sbjct: 61 HMYINSPGGSITAGMAIYDTMQFVSCDVATYCIGQAASMGAVLLTAGAKGKRFALPNARI 120 Query: 134 MIHQPLGGYQGQATDIEIHAREILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEA 193 MIHQPL G QG A ++EIH E+ ++K RMNE+M HTG SLE+IE DT+RDRF+SA EA Sbjct: 121 MIHQPLAGMQGTAREVEIHVAELRRIKQRMNEIMIEHTGHSLEKIEEDTDRDRFMSADEA 180 Query: 194 VEYGLVDSILTHRN 207 YGL+D ++ + Sbjct: 181 CSYGLIDKVVKSVD 194 >UniRef50_Q2JHM1 ATP-dependent Clp protease proteolytic subunit 1 n=133 Tax=cellular organisms RepID=CLPP1_SYNJB Length = 203 Score = 228 bits (581), Expect = 9e-59, Method: Composition-based stats. Identities = 109/194 (56%), Positives = 143/194 (73%), Gaps = 2/194 (1%) Query: 15 ALVPMVIEQTSRGERSFDIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIY 74 VP + + + RL +ER++F+ ++D +AN IV ML+L +++P+KDI Sbjct: 6 PRVPYRLPGEPYSQ-WISLDDRLYQERILFIGEPIDDSLANTIVGVMLYLNSQDPQKDIV 64 Query: 75 LYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVM 134 +YINSPGG +TAGM+IYDTM IKPD+ T+C+GQAASMGAFLL AG KGKRF LP+SR+M Sbjct: 65 MYINSPGGSVTAGMAIYDTMNHIKPDIVTVCVGQAASMGAFLLAAGTKGKRFALPHSRIM 124 Query: 135 IHQPL-GGYQGQATDIEIHAREILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEA 193 +HQP G QGQA+DIEI ARE L+VK RMNE++A TGQ LE+IERD ERD +LSA EA Sbjct: 125 LHQPSLGTIQGQASDIEIRARETLRVKRRMNEILAQTTGQPLEKIERDVERDFYLSATEA 184 Query: 194 VEYGLVDSILTHRN 207 YG+VD ++ R+ Sbjct: 185 QAYGIVDRVIQERS 198 >UniRef50_Q64NW2 ATP-dependent Clp protease proteolytic subunit n=73 Tax=cellular organisms RepID=CLPP_BACFR Length = 220 Score = 228 bits (581), Expect = 1e-58, Method: Composition-based stats. Identities = 100/197 (50%), Positives = 143/197 (72%) Query: 10 FAPHMALVPMVIEQTSRGERSFDIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENP 69 + L P ++E+ D++SRL+ +R+IFL Q++D+ AN + AQ+L+L++ +P Sbjct: 24 KSQAGYLNPYILEERQLNVTQLDVFSRLMMDRIIFLGTQIDDYTANTLQAQLLYLDSVDP 83 Query: 70 EKDIYLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLP 129 KDI +YINSPGG + AG+ IYDTMQFI DV+TIC G AASM + LL AGAKGKR LP Sbjct: 84 GKDISIYINSPGGSVYAGLGIYDTMQFISSDVATICTGMAASMASVLLVAGAKGKRSALP 143 Query: 130 NSRVMIHQPLGGYQGQATDIEIHAREILKVKGRMNELMALHTGQSLEQIERDTERDRFLS 189 +SRVMIHQP+GG QGQA+DIEI AREI K+K + ++A H+G S +++ D++RD +++ Sbjct: 144 HSRVMIHQPMGGAQGQASDIEITAREIQKLKKELYTIIADHSGTSFDKVWADSDRDYWMT 203 Query: 190 APEAVEYGLVDSILTHR 206 A EA EYG++D +L + Sbjct: 204 AQEAKEYGMIDEVLIKK 220 >UniRef50_Q27539 ATP-dependent Clp protease proteolytic subunit, mitochondrial n=788 Tax=cellular organisms RepID=CLPP_CAEEL Length = 221 Score = 227 bits (580), Expect = 1e-58, Method: Composition-based stats. Identities = 102/196 (52%), Positives = 145/196 (73%) Query: 11 APHMALVPMVIEQTSRGERSFDIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPE 70 +P VI+ +GER++DIYSRLL++R++ L V+D +A+ ++AQ+LFL++E+ + Sbjct: 20 VQSRVGIPFVIDNEGKGERTYDIYSRLLRDRIVCLMTPVDDFIASALIAQLLFLQSESGK 79 Query: 71 KDIYLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPN 130 K I++YINSPGG +TAG++IYDT+Q I VST +GQA+SMG+ LL AG KG R LPN Sbjct: 80 KPIHMYINSPGGSVTAGLAIYDTIQMISAPVSTWVIGQASSMGSLLLCAGEKGMRSALPN 139 Query: 131 SRVMIHQPLGGYQGQATDIEIHAREILKVKGRMNELMALHTGQSLEQIERDTERDRFLSA 190 SR+M+HQP GG QG +DI I A EI ++K R+NE+ HTG S ++IE+ +RDRF+SA Sbjct: 140 SRIMVHQPSGGAQGTCSDIVIRAEEITRLKRRLNEIYVHHTGMSYDEIEKTLDRDRFMSA 199 Query: 191 PEAVEYGLVDSILTHR 206 EA+++GLVD I TH Sbjct: 200 HEALKFGLVDQIETHN 215 >UniRef50_C1FDX2 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Micromonas sp. RCC299 RepID=C1FDX2_9CHLO Length = 272 Score = 224 bits (571), Expect = 1e-57, Method: Composition-based stats. Identities = 103/178 (57%), Positives = 140/178 (78%) Query: 28 ERSFDIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAG 87 ER + S+L+ +R+I L G V+D NLIVAQ+L+L+A +P+KDI LY+NSPGG +TAG Sbjct: 77 ERFQGVASQLMNQRIIRLGGAVDDDSCNLIVAQLLWLDATDPKKDITLYVNSPGGSVTAG 136 Query: 88 MSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQAT 147 M+++DTM+ ++PD+ST+C+G AASMGAFLL +G +GKRF LPNSR+MIHQPLGG QGQA Sbjct: 137 MAVFDTMRHVRPDISTVCVGLAASMGAFLLASGQQGKRFSLPNSRIMIHQPLGGAQGQAA 196 Query: 148 DIEIHAREILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEAVEYGLVDSILTH 205 DIEI A EI+ K +N +A TG+ L+ + +DT+RD F+SA EA EYGL+DS++ H Sbjct: 197 DIEIQANEIMHHKSTLNGYLAEFTGKPLDTVMQDTDRDFFMSAFEAKEYGLIDSVIEH 254 >UniRef50_Q7UK67 ATP-dependent Clp protease proteolytic subunit 1 n=3 Tax=Planctomycetaceae RepID=CLPP1_RHOBA Length = 227 Score = 221 bits (564), Expect = 1e-56, Method: Composition-based stats. Identities = 95/182 (52%), Positives = 134/182 (73%) Query: 22 EQTSRGERSFDIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPG 81 Q+ + +R + LL+ R++F+ G++ AN IV ++L+L++EN KDI+LYINSPG Sbjct: 35 YQSYQRQRQMTLGDLLLENRIVFMQGEIHYANANEIVMKLLYLQSENRRKDIHLYINSPG 94 Query: 82 GVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGG 141 G +TA ++IYDTMQ + V+T C+G+A S A LL GAKGKRFCLPNSRVM+HQPLGG Sbjct: 95 GSVTATLAIYDTMQMLSCPVATYCVGEACSGAAVLLIGGAKGKRFCLPNSRVMMHQPLGG 154 Query: 142 YQGQATDIEIHAREILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEAVEYGLVDS 201 GQ +DIEI A E+ + + ++NE+++ H G+S+EQI +DT+RD FL A +A EYGLVD Sbjct: 155 VSGQVSDIEIQAAEMFRYRDKLNEIISSHCGKSVEQIAKDTDRDFFLDAQQAKEYGLVDD 214 Query: 202 IL 203 +L Sbjct: 215 LL 216 >UniRef50_UPI00016C35C0 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Gemmata obscuriglobus UQM 2246 RepID=UPI00016C35C0 Length = 208 Score = 219 bits (559), Expect = 4e-56, Method: Composition-based stats. Identities = 92/198 (46%), Positives = 133/198 (67%) Query: 6 ERDNFAPHMALVPMVIEQTSRGERSFDIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLE 65 D A P++ +R+ + LL++R+IFL + + +A L++ Q+L+LE Sbjct: 4 PFDPTAAAGPFEPLLQRGQYARQRTLTLDDLLLEQRIIFLNWPINNDVATLVIKQLLYLE 63 Query: 66 AENPEKDIYLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKR 125 E +DI LYINSPGG ++A ++IYDTMQF++ ++T CMG AAS A LL AG+ KR Sbjct: 64 YEKKSEDISLYINSPGGSVSATLAIYDTMQFMQSPINTFCMGLAASGAAVLLAAGSPKKR 123 Query: 126 FCLPNSRVMIHQPLGGYQGQATDIEIHAREILKVKGRMNELMALHTGQSLEQIERDTERD 185 + +PNS+VMIHQP G GQ +DIEI A EIL+ +GR+NE++A HTGQ +E I R+T+RD Sbjct: 124 YAMPNSKVMIHQPYGQVGGQVSDIEIQANEILRERGRLNEILAKHTGQPVEIIARETDRD 183 Query: 186 RFLSAPEAVEYGLVDSIL 203 ++ A EA +GLVD +L Sbjct: 184 KYYHADEAKAFGLVDEVL 201 >UniRef50_Q4JWV4 ATP-dependent Clp protease proteolytic subunit 1 n=24 Tax=Actinobacteria (class) RepID=CLPP1_CORJK Length = 188 Score = 219 bits (558), Expect = 5e-56, Method: Composition-based stats. Identities = 95/176 (53%), Positives = 128/176 (72%) Query: 32 DIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIY 91 +Y RLL+ER+IFL QV+D +AN + AQ+L L AE+P +DI LYINSPGG +TAGM+IY Sbjct: 11 SVYERLLRERIIFLGSQVDDEIANELCAQILLLSAEDPTRDISLYINSPGGSVTAGMAIY 70 Query: 92 DTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEI 151 DTM++ D++T MG AASMG FLL+AG KGKR+ LP++R+M+HQP G G A DI I Sbjct: 71 DTMKYAPCDIATYGMGLAASMGQFLLSAGTKGKRYALPHARIMMHQPSAGVGGTAADIAI 130 Query: 152 HAREILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEAVEYGLVDSILTHRN 207 A + K M EL+A TGQ++EQI +D++RDR+ +A +A EYG VD ++T Sbjct: 131 QAEQFAYTKREMAELIAEFTGQTVEQITKDSDRDRWFTAQQAKEYGFVDHVITSAK 186 >UniRef50_A8RFM5 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Eubacterium dolichum DSM 3991 RepID=A8RFM5_9FIRM Length = 204 Score = 216 bits (551), Expect = 3e-55, Method: Composition-based stats. Identities = 97/190 (51%), Positives = 138/190 (72%), Gaps = 1/190 (0%) Query: 16 LVPMVIEQTSRGERSFDIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYL 75 +VP +IE+ GE ++D+YS LLKER+I L G+++D M+ I AQ+L+L + + I L Sbjct: 12 IVPTIIEKNINGEHAYDLYSCLLKERIIILCGEIDDAMSASICAQLLYL-STCSKAPIQL 70 Query: 76 YINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMI 135 YINS GG +TAG++IYD M +I +VSTICMG ASM A LL AG+ GKRF L NS +MI Sbjct: 71 YINSNGGSVTAGLAIYDIMHYIPCEVSTICMGMCASMAAVLLCAGSNGKRFALANSEIMI 130 Query: 136 HQPLGGYQGQATDIEIHAREILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEAVE 195 HQPLGG QGQA D+EI A+ I +VK ++ +++ HT Q + I RD +RD +++A +A++ Sbjct: 131 HQPLGGMQGQAIDMEIAAQHIQQVKEKLYQILCKHTKQDKDIIIRDCDRDFYMNAKQALD 190 Query: 196 YGLVDSILTH 205 YG+VD I+T+ Sbjct: 191 YGMVDEIITN 200 >UniRef50_Q9MUV8 ATP-dependent Clp protease proteolytic subunit n=4 Tax=Viridiplantae RepID=CLPP_MESVI Length = 229 Score = 216 bits (551), Expect = 4e-55, Method: Composition-based stats. Identities = 79/197 (40%), Positives = 124/197 (62%), Gaps = 2/197 (1%) Query: 13 HMALVPMVIEQTSRG--ERSFDIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPE 70 +P V + D+Y+RL +ER++FL ++D +AN ++ M+FL +E+ Sbjct: 1 MPIGIPKVAYRIPGEAVSTYVDVYNRLYRERILFLGEDLDDEVANQLIGVMVFLNSEDDT 60 Query: 71 KDIYLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPN 130 K I+ YINSPGG + AG+ +YD +Q + DV+TICMG AASM +F+L G G+R P+ Sbjct: 61 KGIFFYINSPGGSMNAGLGVYDMIQHVNVDVTTICMGLAASMASFILAGGTPGQRLMFPH 120 Query: 131 SRVMIHQPLGGYQGQATDIEIHAREILKVKGRMNELMALHTGQSLEQIERDTERDRFLSA 190 +RVM+HQP+GG G+A + + E+ +++ + L TGQSLE+I +D RD F+ Sbjct: 121 ARVMLHQPMGGNGGKAKYMVEESVEVKRLRELIAHLYVKRTGQSLEKIRKDMNRDNFMRP 180 Query: 191 PEAVEYGLVDSILTHRN 207 +A EYGL+D ++T+ N Sbjct: 181 RQAKEYGLIDHMVTNVN 197 >UniRef50_Q05FR8 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Candidatus Carsonella ruddii PV RepID=CLPP_CARRP Length = 194 Score = 216 bits (551), Expect = 4e-55, Method: Composition-based stats. Identities = 111/193 (57%), Positives = 157/193 (81%), Gaps = 1/193 (0%) Query: 14 MALVPMVIEQTSRGERSFDIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDI 73 M +P VI++ +G+R D+YS++LKERVI+L G +ED MA+LIV+Q++FL++EN KDI Sbjct: 1 MIFLPTVIDKNIKGDRFLDLYSKMLKERVIYLNGAIEDTMASLIVSQLMFLDSENS-KDI 59 Query: 74 YLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRV 133 LYINSPGGV+++G+SIYDT+QF+K DVSTIC+GQAASM A LL AG KGKRFC PNSR+ Sbjct: 60 ILYINSPGGVVSSGLSIYDTIQFLKSDVSTICIGQAASMAAVLLAAGKKGKRFCFPNSRI 119 Query: 134 MIHQPLGGYQGQATDIEIHAREILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEA 193 MIHQPLG QGQA+D+EIHARE++ +K + E+++ HT S+ QI +DT+RD F++ + Sbjct: 120 MIHQPLGYAQGQASDVEIHAREMINIKQILCEILSSHTNNSIFQIFKDTDRDNFMNCKQT 179 Query: 194 VEYGLVDSILTHR 206 ++YG++D++L + Sbjct: 180 LKYGIIDNVLYKK 192 >UniRef50_A4RXD2 ATP-dependent Clp protease proteolytic subunit n=3 Tax=cellular organisms RepID=A4RXD2_OSTLU Length = 319 Score = 215 bits (547), Expect = 9e-55, Method: Composition-based stats. Identities = 98/205 (47%), Positives = 139/205 (67%), Gaps = 5/205 (2%) Query: 3 YSGERDNFAPHMALVPMVIEQTSRGERSFDIYSRLLKERVIFLTGQVEDHMANLIVAQML 62 Y + AP P+V S + LL+ R++FL QV+D A+ +++Q+L Sbjct: 75 YDAVNASGAPGARAGPVVPRDQSGSP-----FDSLLRNRIVFLGSQVDDFNADAVISQLL 129 Query: 63 FLEAENPEKDIYLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAK 122 L+ ++P K+I L+INSPGG +TAGM IYD MQF + VST+C+G AASMGAFLL +G K Sbjct: 130 LLDQQDPTKEIKLFINSPGGSVTAGMGIYDAMQFCRAPVSTVCLGLAASMGAFLLASGEK 189 Query: 123 GKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREILKVKGRMNELMALHTGQSLEQIERDT 182 G+R +PN+R+MIHQPLGG QG A DIEI A+EI+ K +N LMA HTGQ ++ I+ DT Sbjct: 190 GRRMSMPNARIMIHQPLGGAQGSAVDIEIQAKEIMHHKANLNRLMAFHTGQDVKTIDEDT 249 Query: 183 ERDRFLSAPEAVEYGLVDSILTHRN 207 +RDR++S EA +YG++D ++ + Sbjct: 250 DRDRYMSPLEAKQYGVIDIVIGGDD 274 >UniRef50_Q9SXJ6 ATP-dependent Clp protease proteolytic subunit 3, chloroplastic n=21 Tax=Embryophyta RepID=CLPP3_ARATH Length = 309 Score = 215 bits (547), Expect = 9e-55, Method: Composition-based stats. Identities = 93/175 (53%), Positives = 134/175 (76%) Query: 31 FDIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSI 90 D + LL++R++FL QV+D A+L+++Q+L L+AE+ E+DI L+INSPGG ITAGM I Sbjct: 84 LDTTNMLLRQRIVFLGSQVDDMTADLVISQLLLLDAEDSERDITLFINSPGGSITAGMGI 143 Query: 91 YDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIE 150 YD M+ K DVST+C+G AASMGAFLL +G+KGKR+C+PNS+VMIHQPLG G+AT++ Sbjct: 144 YDAMKQCKADVSTVCLGLAASMGAFLLASGSKGKRYCMPNSKVMIHQPLGTAGGKATEMS 203 Query: 151 IHAREILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEAVEYGLVDSILTH 205 I RE++ K ++N++ + TG+ +IE DT+RD FL+ EA EYGL+D+++ Sbjct: 204 IRIREMMYHKIKLNKIFSRITGKPESEIESDTDRDNFLNPWEAKEYGLIDAVIDD 258 >UniRef50_C0M7M8 ATP-dependent Clp protease proteolytic subunit n=38 Tax=Bacteria RepID=CLPP_STRE4 Length = 196 Score = 214 bits (546), Expect = 1e-54, Method: Composition-based stats. Identities = 106/193 (54%), Positives = 149/193 (77%), Gaps = 2/193 (1%) Query: 16 LVPMVIEQTSRGERSFDIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYL 75 ++P+VIEQTSRGERS+DIYSRLLK+R+I LTG VED+MAN ++AQ+LFL+A++ KDIYL Sbjct: 1 MIPVVIEQTSRGERSYDIYSRLLKDRIIMLTGPVEDNMANSVIAQLLFLDAQDNTKDIYL 60 Query: 76 YINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMI 135 Y+N+PGG ++AG++I DTM FIK DV TI MG AASMG + ++GAKGKRF LPN+ MI Sbjct: 61 YVNTPGGSVSAGLAIVDTMNFIKADVQTIVMGMAASMGTVIASSGAKGKRFMLPNAEYMI 120 Query: 136 HQPL--GGYQGQATDIEIHAREILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEA 193 HQP+ G Q TD+ I A +LK + R+ +++A + G++++QI +D ERD ++SA E Sbjct: 121 HQPMGGTGGGTQQTDMAIAAEHLLKTRHRLEKILAQNAGKTIKQIHKDAERDYWMSAEET 180 Query: 194 VEYGLVDSILTHR 206 + YG +D I+ + Sbjct: 181 LAYGFIDEIMENN 193 >UniRef50_Q2J9A8 ATP-dependent Clp protease proteolytic subunit 4 n=152 Tax=Bacteria RepID=CLPP4_FRASC Length = 238 Score = 212 bits (541), Expect = 4e-54, Method: Composition-based stats. Identities = 99/206 (48%), Positives = 137/206 (66%), Gaps = 2/206 (0%) Query: 2 SYSGERDNFAPHMALVPMVIEQTSRGERSFDIYSRLLKERVIFLTGQVEDHMANLIVAQM 61 S + +P A V + ++SRLL+ R++FL VED +AN I A++ Sbjct: 6 SRLTQAGPGSPRRATVQAAASGLGSADDQ--VFSRLLENRIVFLGSVVEDAVANAISAKL 63 Query: 62 LFLEAENPEKDIYLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGA 121 L L AE+P DIYLYINSPGG ++AGM+IYDTMQ++ DV+T+ +G A SMG FLL AG Sbjct: 64 LLLAAEDPAADIYLYINSPGGSVSAGMAIYDTMQYVGNDVATVALGLAGSMGQFLLCAGT 123 Query: 122 KGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREILKVKGRMNELMALHTGQSLEQIERD 181 GKR+ LP++R+M+HQP GG G A DI I A ++L K + E +A HTGQ++EQIE D Sbjct: 124 AGKRYALPHARIMMHQPHGGIGGTAADISIQAEQMLYTKRTLQERIAFHTGQTVEQIETD 183 Query: 182 TERDRFLSAPEAVEYGLVDSILTHRN 207 ++RDR+ +A EA EYGLVD ++ + Sbjct: 184 SDRDRWFTAEEAKEYGLVDHVVVRAD 209 >UniRef50_Q47MU3 ATP-dependent Clp protease proteolytic subunit 1 n=82 Tax=Bacteria RepID=CLPP1_THEFY Length = 222 Score = 210 bits (536), Expect = 2e-53, Method: Composition-based stats. Identities = 104/207 (50%), Positives = 147/207 (71%), Gaps = 2/207 (0%) Query: 3 YSGERDNFAPHMALV-PMVIEQTSRGERSFDIYSRLLKERVIFLTGQVEDHMANLIVAQM 61 Y G AP V P IE+T+ G + + Y++L +ER+IF+ Q++D AN I+AQM Sbjct: 12 YGGGMAPMAPQSRYVLPSYIERTAYGVKEMNPYNKLFEERIIFVGVQIDDTSANDIIAQM 71 Query: 62 LFLEAENPEKDIYLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGA 121 + LE + ++DI LYINSPGG T+ M+IYDTMQF++PD+ T+C+GQAAS A LL G Sbjct: 72 MTLEHIDSDRDITLYINSPGGSFTSLMAIYDTMQFVRPDIQTVCVGQAASAAAVLLAGGT 131 Query: 122 KGKRFCLPNSRVMIHQPLG-GYQGQATDIEIHAREILKVKGRMNELMALHTGQSLEQIER 180 KGKR LPNSR++IHQP G GQA+D+EI A EI++++ ++ ++A HTG+S+E+I R Sbjct: 132 KGKRTALPNSRILIHQPATEGTHGQASDVEIMANEIMRIRHQLETILAKHTGRSVEEISR 191 Query: 181 DTERDRFLSAPEAVEYGLVDSILTHRN 207 D ERD+ L+A EA EYG+VD +L +R Sbjct: 192 DIERDKILTAEEAKEYGIVDDVLPYRK 218 >UniRef50_Q5Z0M4 ATP-dependent Clp protease proteolytic subunit 1 n=2 Tax=Actinomycetales RepID=CLPP1_NOCFA Length = 197 Score = 210 bits (535), Expect = 2e-53, Method: Composition-based stats. Identities = 84/195 (43%), Positives = 132/195 (67%), Gaps = 1/195 (0%) Query: 13 HMALVPMVIEQTSRG-ERSFDIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEK 71 +P VI Q RG ER DIYS LL ER+++L ++ +AN ++AQ+L LE+E+P++ Sbjct: 2 STYTIPNVIAQHPRGGERITDIYSHLLAERIVYLGTPIDSGVANALIAQLLHLESESPDQ 61 Query: 72 DIYLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNS 131 +I YIN GG + + +++YDTMQ I V T C+GQA ++GA LL GA G+R LP++ Sbjct: 62 EINFYINCEGGDLPSMLAVYDTMQHIGAPVHTTCVGQAIAVGAVLLAGGAPGQRAMLPHA 121 Query: 132 RVMIHQPLGGYQGQATDIEIHAREILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAP 191 RV++HQP QG D+ + A E+++++ + +++ HTG+S EQ+ DT+RDR +A Sbjct: 122 RVVLHQPAARGQGPIPDLILQADELVRMRSEIEAILSRHTGRSPEQLREDTDRDRVFTAT 181 Query: 192 EAVEYGLVDSILTHR 206 A+EYGL+D++L+ R Sbjct: 182 AALEYGLIDTVLSPR 196 >UniRef50_Q9SAA2 ATP-dependent Clp protease proteolytic subunit 6, chloroplastic n=9 Tax=Embryophyta RepID=CLPP6_ARATH Length = 271 Score = 209 bits (533), Expect = 4e-53, Method: Composition-based stats. Identities = 78/205 (38%), Positives = 121/205 (59%), Gaps = 6/205 (2%) Query: 8 DNFAPHMALV------PMVIEQTSRGERSFDIYSRLLKERVIFLTGQVEDHMANLIVAQM 61 DN AP ++ P V+ D+ S L + R+IF+ + +A +++Q+ Sbjct: 66 DNKAPRFGVIEAKKGNPPVMPSVMTPGGPLDLSSVLFRNRIIFIGQPINAQVAQRVISQL 125 Query: 62 LFLEAENPEKDIYLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGA 121 + L + + + DI +Y+N PGG + ++IYD M +IKP V T+ G AAS GA LL G Sbjct: 126 VTLASIDDKSDILMYLNCPGGSTYSVLAIYDCMSWIKPKVGTVAFGVAASQGALLLAGGE 185 Query: 122 KGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREILKVKGRMNELMALHTGQSLEQIERD 181 KG R+ +PN+RVMIHQP G G D+ E ++ + +++ + A TGQ LE++++ Sbjct: 186 KGMRYAMPNTRVMIHQPQTGCGGHVEDVRRQVNEAIEARQKIDRMYAAFTGQPLEKVQQY 245 Query: 182 TERDRFLSAPEAVEYGLVDSILTHR 206 TERDRFLSA EA+E+GL+D +L Sbjct: 246 TERDRFLSASEALEFGLIDGLLETE 270 >UniRef50_C7QFY1 ATP-dependent Clp protease proteolytic subunit n=3 Tax=Actinomycetales RepID=C7QFY1_CATAD Length = 201 Score = 209 bits (533), Expect = 4e-53, Method: Composition-based stats. Identities = 86/200 (43%), Positives = 129/200 (64%) Query: 7 RDNFAPHMALVPMVIEQTSRGERSFDIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEA 66 + A +P V Q GER DIYS LL ER+I+L ++ +AN ++AQ+L LE+ Sbjct: 1 MNTAATMNYTIPYVTTQRPGGERVTDIYSHLLTERIIYLGTAIDAGVANALIAQLLHLES 60 Query: 67 ENPEKDIYLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRF 126 + P+++I LY+N GG +T+ ++IYDTMQ IK + T C+GQA ++GA LL AG G R Sbjct: 61 DGPDREISLYVNCEGGDLTSMLAIYDTMQHIKAPIRTTCVGQAIAVGAVLLAAGTPGLRS 120 Query: 127 CLPNSRVMIHQPLGGYQGQATDIEIHAREILKVKGRMNELMALHTGQSLEQIERDTERDR 186 LP++RV++HQP QG D+ I A E+++++ + ++ HTGQ+ E++ DT+RDR Sbjct: 121 VLPHARVVLHQPAARGQGAIPDLIIQADELVRMRSELEAILTQHTGQTAERLRHDTDRDR 180 Query: 187 FLSAPEAVEYGLVDSILTHR 206 +A AVEYGL D +L R Sbjct: 181 VFTAAAAVEYGLADQVLGPR 200 >UniRef50_C4R657 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Pichia pastoris GS115 RepID=C4R657_PICPG Length = 226 Score = 206 bits (525), Expect = 3e-52, Method: Composition-based stats. Identities = 85/192 (44%), Positives = 126/192 (65%), Gaps = 4/192 (2%) Query: 19 MVIEQTSRGERSFDIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYIN 78 + S + D++++LL ER+I+L G ++D A I AQ+L+LE+++ K I +YIN Sbjct: 29 ALPPTPSNSPPAGDLFTKLLNERIIYLAGGIDDAQATSITAQLLYLESQSTSKQINIYIN 88 Query: 79 SPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQP 138 SPGG +TAG++IYDT+Q+I+ VST+C+GQA SM + LL +G GKR LPN+ +M+HQP Sbjct: 89 SPGGSVTAGLAIYDTIQYIRAPVSTVCLGQACSMASLLLASGTHGKRLILPNATIMVHQP 148 Query: 139 LG--GYQGQATDIEIHAREILKVKGRMNELMALHTG--QSLEQIERDTERDRFLSAPEAV 194 G +GQATDIEI+AR I+ K ++ L H ++++I ERDRF+ EAV Sbjct: 149 SSANGIKGQATDIEIYARHIINTKQKLQTLYLKHMSPTMTVDEITALLERDRFMEPEEAV 208 Query: 195 EYGLVDSILTHR 206 GL D +L + Sbjct: 209 SLGLADRVLERK 220 >UniRef50_P56772 ATP-dependent Clp protease proteolytic subunit 1 n=184 Tax=Streptophytina RepID=CLPP1_ARATH Length = 196 Score = 205 bits (521), Expect = 9e-52, Method: Composition-based stats. Identities = 83/194 (42%), Positives = 122/194 (62%), Gaps = 3/194 (1%) Query: 13 HMALVPMVIEQTSRGER--SFDIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPE 70 VP V ++ DIY+RL +ER+ FL +V+ ++N +++ M++L E Sbjct: 1 MPIGVPKVPFRSPGEGDTSWVDIYNRLYRERLFFLGQEVDTEISNQLISLMIYLSIEKDT 60 Query: 71 KDIYLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPN 130 KD+YL+INSPGG + +GM+IYDTMQF++PDV TICMG AAS+ +F+L GA KR P+ Sbjct: 61 KDLYLFINSPGGWVISGMAIYDTMQFVRPDVQTICMGLAASIASFILVGGAITKRIAFPH 120 Query: 131 SRVMIHQP-LGGYQGQATDIEIHAREILKVKGRMNELMALHTGQSLEQIERDTERDRFLS 189 +RVMIHQP Y+ Q + + A E+LK++ + + TG+ + I D ERD F+S Sbjct: 121 ARVMIHQPASSFYEAQTGEFILEAEELLKLRETITRVYVQRTGKPIWVISEDMERDVFMS 180 Query: 190 APEAVEYGLVDSIL 203 A EA YG+VD + Sbjct: 181 ATEAQAYGIVDLVA 194 >UniRef50_D1BZJ7 ATP-dependent Clp protease proteolytic subunit n=27 Tax=Actinobacteridae RepID=D1BZJ7_XYLCX Length = 236 Score = 205 bits (521), Expect = 1e-51, Method: Composition-based stats. Identities = 99/206 (48%), Positives = 145/206 (70%), Gaps = 3/206 (1%) Query: 5 GERDNFAPHMALV-PMVIEQTSRGERSFDIYSRLLKERVIFLTGQVEDHMANLIVAQMLF 63 G P V P E+T+ G + D Y++L ++R+IFL QV+D A+ ++AQ+L Sbjct: 24 GGVALPGPSSRYVLPQFEERTAYGFKRQDPYTKLFEDRIIFLGVQVDDASADDVMAQLLV 83 Query: 64 LEAENPEKDIYLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKG 123 LE+++P++DI +YINSPGG TA ++YDTMQ+IKP + T+C+GQAAS A LL AG KG Sbjct: 84 LESQDPDRDIMMYINSPGGSFTAMTALYDTMQYIKPQIQTVCLGQAASAAAVLLAAGQKG 143 Query: 124 KRFCLPNSRVMIHQPL--GGYQGQATDIEIHAREILKVKGRMNELMALHTGQSLEQIERD 181 KR+ LPN+RV+IHQP GG QA+DIEIHA E+++++ + E +A H+G++ EQ++ D Sbjct: 144 KRYALPNARVLIHQPAMEGGGYAQASDIEIHANELIRMREWLEETLASHSGRTPEQVKED 203 Query: 182 TERDRFLSAPEAVEYGLVDSILTHRN 207 ERD+ L+A +A +YGLVD +L R Sbjct: 204 IERDKILTAAQAKDYGLVDLVLESRK 229 >UniRef50_Q94B60 ATP-dependent Clp protease proteolytic subunit 4, chloroplastic n=12 Tax=Embryophyta RepID=CLPP4_ARATH Length = 292 Score = 204 bits (518), Expect = 2e-51, Method: Composition-based stats. Identities = 92/199 (46%), Positives = 138/199 (69%), Gaps = 1/199 (0%) Query: 9 NFAPHMALVPMVIEQTSRGERSFDIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAEN 68 FA + E RG S D+ LL+ER++FL ++D +A+ I++Q+L L+A++ Sbjct: 57 RFANASIEMSQTQESAIRGAES-DVMGLLLRERIVFLGSSIDDFVADAIMSQLLLLDAKD 115 Query: 69 PEKDIYLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCL 128 P+KDI L+INSPGG ++A M+IYD +Q ++ DVSTI +G AAS + +L AG KGKRF + Sbjct: 116 PKKDIKLFINSPGGSLSATMAIYDVVQLVRADVSTIALGIAASTASIILGAGTKGKRFAM 175 Query: 129 PNSRVMIHQPLGGYQGQATDIEIHAREILKVKGRMNELMALHTGQSLEQIERDTERDRFL 188 PN+R+MIHQPLGG GQA D+EI A+E++ K + ++A T +S EQ+ +D +RDR++ Sbjct: 176 PNTRIMIHQPLGGASGQAIDVEIQAKEVMHNKNNVTSIIAGCTSRSFEQVLKDIDRDRYM 235 Query: 189 SAPEAVEYGLVDSILTHRN 207 S EAVEYGL+D ++ + Sbjct: 236 SPIEAVEYGLIDGVIDGDS 254 >UniRef50_C1E717 ATP-dependent Clp protease proteolytic subunit n=4 Tax=Viridiplantae RepID=C1E717_9CHLO Length = 279 Score = 203 bits (516), Expect = 3e-51, Method: Composition-based stats. Identities = 81/209 (38%), Positives = 127/209 (60%), Gaps = 3/209 (1%) Query: 2 SYSGERDNFAPHMALVPMVIEQTSRG--ERSFDIYSRLLKERVIFLTGQVEDHMANLIVA 59 S G R VP V +T + DI++ L +ER++++ +++ + N +VA Sbjct: 68 SGKGARSVATMMPIGVPRVPYKTPNENSWQWVDIWNCLYRERIVWVGQTIDEELGNQLVA 127 Query: 60 QMLFLEA-ENPEKDIYLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLT 118 ML+L++ E KDIYLYIN+ GG + M+I DTM +IK DV + G A +MG LL Sbjct: 128 TMLYLDSIEKGGKDIYLYINTEGGDVVPTMAILDTMGYIKSDVGCVGFGSARAMGGMLLA 187 Query: 119 AGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREILKVKGRMNELMALHTGQSLEQI 178 GAKGKR LPN+ +M+H P G +G A+DI +E+LK++ ++N++++ TGQ E++ Sbjct: 188 NGAKGKRAALPNTCIMLHHPAGVARGSASDIHNEGKELLKIRAKINKMVSRATGQPEEKV 247 Query: 179 ERDTERDRFLSAPEAVEYGLVDSILTHRN 207 D RD L+A +A++YG+VD +L R Sbjct: 248 HEDIRRDFHLTAEQALDYGIVDKVLYKRR 276 >UniRef50_Q8LB10 ATP-dependent Clp protease proteolytic subunit-related protein 4, chloroplastic n=12 Tax=Viridiplantae RepID=CLPR4_ARATH Length = 305 Score = 201 bits (512), Expect = 1e-50, Method: Composition-based stats. Identities = 86/212 (40%), Positives = 126/212 (59%), Gaps = 11/212 (5%) Query: 7 RDNFAPHMALVPMVIE---QTSRGERSFDIYSRLLKERVIFLTGQVEDHMANLIVAQMLF 63 + P +V MVI ++ + D+ S L K R+++L + + LI+A+ L+ Sbjct: 77 FSSSKPKRGVVTMVIPFSKGSAHEQPPPDLASYLFKNRIVYLGMSLVPSVTELILAEFLY 136 Query: 64 LEAENPEKDIYLYINSPG--------GVITAGMSIYDTMQFIKPDVSTICMGQAASMGAF 115 L+ E+ EK IYLYINS G G T +IYD M ++KP + T+C+G A A Sbjct: 137 LQYEDEEKPIYLYINSTGTTKNGEKLGYDTEAFAIYDVMGYVKPPIFTLCVGNAWGEAAL 196 Query: 116 LLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREILKVKGRMNELMALHTGQSL 175 LLTAGAKG R LP+S +MI QP+ +QGQATD+EI +EI +K M +L + H G+S Sbjct: 197 LLTAGAKGNRSALPSSTIMIKQPIARFQGQATDVEIARKEIKHIKTEMVKLYSKHIGKSP 256 Query: 176 EQIERDTERDRFLSAPEAVEYGLVDSILTHRN 207 EQIE D +R ++ S EAVEYG++D ++ + Sbjct: 257 EQIEADMKRPKYFSPTEAVEYGIIDKVVYNER 288 >UniRef50_Q9XJ36 ATP-dependent Clp protease proteolytic subunit-related protein 2, chloroplastic n=11 Tax=Embryophyta RepID=CLPR2_ARATH Length = 279 Score = 200 bits (508), Expect = 3e-50, Method: Composition-based stats. Identities = 73/204 (35%), Positives = 120/204 (58%), Gaps = 2/204 (0%) Query: 2 SYSGERDNFAPHMALVPMVIEQT--SRGERSFDIYSRLLKERVIFLTGQVEDHMANLIVA 59 + R P V + + DI++ L +ERVIF+ +++ +N I+A Sbjct: 57 TGKASRSRVKMMPIGTPRVPYRNREEGTWQWVDIWNALYRERVIFIGQNIDEEFSNQILA 116 Query: 60 QMLFLEAENPEKDIYLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTA 119 ML+L+ + + IY+Y+N PGG +T ++IYDTM+ +K V T C+G A ++ FLL A Sbjct: 117 TMLYLDTLDDSRRIYMYLNGPGGDLTPSLAIYDTMKSLKSPVGTHCVGLAYNLAGFLLAA 176 Query: 120 GAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREILKVKGRMNELMALHTGQSLEQIE 179 G KG RF +P SR+ + P G +GQA DI+ A+E+ +++ + +A +TGQ E++ Sbjct: 177 GEKGHRFAMPLSRIALQSPAGAARGQADDIQNEAKELSRIRDYLFNELAKNTGQPAERVF 236 Query: 180 RDTERDRFLSAPEAVEYGLVDSIL 203 +D R + +A EA+EYGL+D I+ Sbjct: 237 KDLSRVKRFNAEEAIEYGLIDKIV 260 >UniRef50_Q82CA5 ATP-dependent Clp protease proteolytic subunit 4 n=57 Tax=Actinobacteridae RepID=CLPP4_STRAW Length = 226 Score = 199 bits (505), Expect = 7e-50, Method: Composition-based stats. Identities = 98/199 (49%), Positives = 143/199 (71%), Gaps = 1/199 (0%) Query: 10 FAPHMALVPMVIEQTSRGERSFDIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENP 69 A ++P +E+TS+G R +D Y++L +ERVIFL Q++D AN ++AQ+L LE+ +P Sbjct: 21 RAESRYVIPRFVERTSQGVREYDPYAKLFEERVIFLGVQIDDASANDVMAQLLCLESMDP 80 Query: 70 EKDIYLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLP 129 ++DI +YINSPGG TA +IYDTMQF+KPD+ T+CMGQAAS A LL AG GKR LP Sbjct: 81 DRDISVYINSPGGSFTALTAIYDTMQFVKPDIQTVCMGQAASAAAILLAAGTPGKRMALP 140 Query: 130 NSRVMIHQPLGGYQ-GQATDIEIHAREILKVKGRMNELMALHTGQSLEQIERDTERDRFL 188 N+RV+IHQP GQ +D+EI A EIL+++ ++ +++A H+ +E+I D ERD+ L Sbjct: 141 NARVLIHQPYSETGRGQVSDLEIAANEILRMRSQLEDMLAKHSTTPIEKIREDIERDKIL 200 Query: 189 SAPEAVEYGLVDSILTHRN 207 +A +A+ YGL+D I++ R Sbjct: 201 TAEDALAYGLIDQIISTRK 219 >UniRef50_B3L4C3 ATP-dependent Clp protease proteolytic subunit n=4 Tax=Plasmodium RepID=B3L4C3_PLAKH Length = 372 Score = 198 bits (504), Expect = 1e-49, Method: Composition-based stats. Identities = 73/175 (41%), Positives = 113/175 (64%), Gaps = 1/175 (0%) Query: 32 DIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIY 91 D+ K+R+I+LT ++ + +++Q+L+L+ N + DI +YINSPGG I G++I Sbjct: 183 DLKLFFFKKRIIYLTEEINKKTTDEMISQLLYLDNINHD-DIKIYINSPGGSINEGLAIL 241 Query: 92 DTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEI 151 D +IK D+ TI G ASM + +L +G KGKR LPN R+MIHQPLG GQ DIEI Sbjct: 242 DIFNYIKSDIQTISFGLVASMASVILASGKKGKRKSLPNCRIMIHQPLGNAFGQPQDIEI 301 Query: 152 HAREILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEAVEYGLVDSILTHR 206 +EIL +K + ++ T Q+ E IE+D++RD +++A EA YG++D ++ + Sbjct: 302 QTKEILYLKKLLYNYLSTFTNQTTETIEKDSDRDHYMNALEAKRYGIIDEVIETK 356 >UniRef50_C7JE62 ATP-dependent Clp protease proteolytic subunit n=9 Tax=Proteobacteria RepID=C7JE62_ACEP3 Length = 226 Score = 197 bits (501), Expect = 2e-49, Method: Composition-based stats. Identities = 75/196 (38%), Positives = 127/196 (64%), Gaps = 3/196 (1%) Query: 12 PHMALVPMVIEQTSRGERSFDIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEK 71 P P E+ + G ++ +L K+R + + G ++D +A + ++L L E+ ++ Sbjct: 27 PETPAAPEKAEEKTAGAPHGELEHKLFKQRKVLIFGGIDDKIARDVTGRLLALAGES-DQ 85 Query: 72 DIYLYINSPGGVITAGMSIYDTMQFIK--PDVSTICMGQAASMGAFLLTAGAKGKRFCLP 129 I +Y+NSPGG + +G +I+D ++F+ ++ I G AS GA + AG K +RFCLP Sbjct: 86 PIDVYVNSPGGHVESGDTIHDMIRFVDSIAPINMIGTGWVASAGALIFAAGHKDRRFCLP 145 Query: 130 NSRVMIHQPLGGYQGQATDIEIHAREILKVKGRMNELMALHTGQSLEQIERDTERDRFLS 189 N+R ++HQP+GG +G ATDI+I AREI+K++ R+N + A TG S E++ +DT+R+ ++S Sbjct: 146 NTRFLLHQPMGGVRGPATDIDIEAREIIKMRERLNRIFAKETGHSYEKVAKDTDRNYWMS 205 Query: 190 APEAVEYGLVDSILTH 205 A EA++YGLV I++ Sbjct: 206 AKEAIDYGLVTKIISK 221 >UniRef50_P36387 ATP-dependent Clp protease proteolytic subunit n=4 Tax=Pinus RepID=CLPP_PINCO Length = 205 Score = 196 bits (499), Expect = 3e-49, Method: Composition-based stats. Identities = 81/192 (42%), Positives = 115/192 (59%), Gaps = 3/192 (1%) Query: 17 VPMVIEQTSRGER--SFDIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIY 74 VP V + E D+Y+RL +ER++FL + + +AN ++ M++L AE+ K+I+ Sbjct: 5 VPKVPFRAPGDEDATWVDLYNRLYRERLLFLAQDINNEIANQLMGLMVYLSAEDANKEIF 64 Query: 75 LYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVM 134 +IN PGG + G+ +Y MQ I PDV+TICMG AASMG+F+L G KR LP++RVM Sbjct: 65 SFINCPGGSVIPGVGLYRMMQAIVPDVNTICMGVAASMGSFILIGGEMPKRIALPHARVM 124 Query: 135 IHQPLGGYQ-GQATDIEIHAREILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEA 193 IHQP Y G A D ++ + V+ + E TGQ E I+RD RD F+SA EA Sbjct: 125 IHQPASSYYDGSAADFHNESKHVTLVREYITECYIERTGQPEEVIQRDLNRDVFMSATEA 184 Query: 194 VEYGLVDSILTH 205 YG+VD + Sbjct: 185 QAYGIVDVVAED 196 >UniRef50_UPI0001AF02E3 ATP-dependent Clp protease n=1 Tax=Streptomyces ghanaensis ATCC 14672 RepID=UPI0001AF02E3 Length = 211 Score = 196 bits (499), Expect = 4e-49, Method: Composition-based stats. Identities = 79/197 (40%), Positives = 126/197 (63%), Gaps = 2/197 (1%) Query: 13 HMALVPMVIEQTSRGERSFDIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKD 72 ++P + E+T+ G R+ D Y++LL+ER++ L +++ AN ++AQ L+LE P++D Sbjct: 6 ARHVLPELTERTASGHRTTDPYAKLLQERIVLLGTPIDETSANDVMAQFLYLEHRAPDRD 65 Query: 73 IYLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSR 132 I LY+NSPGG A +IYDT++F+ DV T+C+G+A A LL AG GKR LP +R Sbjct: 66 ISLYVNSPGGSFHAMSTIYDTLRFVSCDVETVCLGRAEGTAALLLAAGTPGKRCVLPGAR 125 Query: 133 VMIHQ--PLGGYQGQATDIEIHAREILKVKGRMNELMALHTGQSLEQIERDTERDRFLSA 190 +++ Q P G +G+A+D+ A E+ +++ RM +++ H G++ EQ D ERD L A Sbjct: 126 LVLRQPDPSGPLEGRASDLAARAEELGRIRSRMEDMLVRHAGRTPEQARADLERDTVLDA 185 Query: 191 PEAVEYGLVDSILTHRN 207 AV++GL D I+ R Sbjct: 186 RAAVDHGLADRIVPDRR 202 >UniRef50_A6DMN5 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Lentisphaera araneosa HTCC2155 RepID=A6DMN5_9BACT Length = 196 Score = 196 bits (498), Expect = 5e-49, Method: Composition-based stats. Identities = 67/184 (36%), Positives = 109/184 (59%) Query: 22 EQTSRGERSFDIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPG 81 E+ + + + +L R I + ++ ++ +++Q++ L + ++ IY+YINS G Sbjct: 8 EEKKKEQDPGGMMKEMLDTRTIIIAEEISPELSRRVLSQLILLNKRSEKEPIYVYINSGG 67 Query: 82 GVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGG 141 G +G +IYD +QF K V T+C G AS + A KGK F LPNSR M+HQP G Sbjct: 68 GCADSGFTIYDMLQFFKAPVFTVCSGMCASAAILIFLAAKKGKNFSLPNSRFMLHQPSTG 127 Query: 142 YQGQATDIEIHAREILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEAVEYGLVDS 201 +G A+DIEI A EI K + R N+++A + LE++ +D +RD ++S EA +YG+V Sbjct: 128 VRGTASDIEITAEEINKTRVRYNQIVADVCNKPLEEVSKDADRDFWMSPAEAKKYGMVSK 187 Query: 202 ILTH 205 ++T Sbjct: 188 VITS 191 >UniRef50_D2Q440 Endopeptidase Clp n=5 Tax=Actinomycetales RepID=D2Q440_9ACTO Length = 211 Score = 195 bits (496), Expect = 7e-49, Method: Composition-based stats. Identities = 88/194 (45%), Positives = 136/194 (70%) Query: 13 HMALVPMVIEQTSRGERSFDIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKD 72 +P VI Q+ RGER D+YS LL ER+I+L ++ +AN ++AQ+L LEA+ P++D Sbjct: 2 SSYTIPNVITQSPRGERIMDVYSHLLSERIIYLGTGIDAGVANALIAQLLHLEADKPDQD 61 Query: 73 IYLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSR 132 I LYIN GG +TA ++IYDT+Q+I+ VST+C+GQA + GA LL AG G+R LP++R Sbjct: 62 INLYINCEGGDMTAMLAIYDTIQYIRSPVSTLCVGQAIAAGAVLLAAGEPGRRAVLPHAR 121 Query: 133 VMIHQPLGGYQGQATDIEIHAREILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPE 192 +++HQP QG D+ + A E+++V+ ++ +++ HTGQ++EQ+ DT+RD L+A Sbjct: 122 IVLHQPAARGQGTIPDLILQADEVVRVRAQVESILSAHTGQTIEQLRHDTDRDHVLTAEG 181 Query: 193 AVEYGLVDSILTHR 206 A YG+VD ++ HR Sbjct: 182 ARAYGIVDEVIQHR 195 >UniRef50_Q72R01 ATP-dependent Clp protease proteolytic subunit 2 n=9 Tax=Bacteria RepID=CLPP2_LEPIC Length = 197 Score = 194 bits (492), Expect = 2e-48, Method: Composition-based stats. Identities = 87/198 (43%), Positives = 127/198 (64%), Gaps = 6/198 (3%) Query: 12 PHMALVPMVIEQTSRGERSFDIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEK 71 P + V E+ + + I L R IFL G V D + +V ++L+LE ++P K Sbjct: 2 PETEKIAEVFEELTGSK----ISKNFLDHRKIFLWGPVTDESSKDLVGKLLYLEMKDPGK 57 Query: 72 DIYLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNS 131 I YINSPGGV+T+GM+++DT++ I V T+CMG AASMG+ LL AG KG+R PN Sbjct: 58 KITFYINSPGGVVTSGMTVFDTIKMISSPVHTVCMGMAASMGSVLLAAGTKGERSIWPNG 117 Query: 132 RVMIHQPLGGYQ--GQATDIEIHAREILKVKGRMNELMALHTGQSLEQIERDTERDRFLS 189 +VMIHQP G Q ATD++IHA EILK K ++N+++A G + ++E DT+RD ++ Sbjct: 118 KVMIHQPSIGGQIVAPATDLKIHAEEILKTKTKLNQILADACGHPISKLEEDTDRDYYMD 177 Query: 190 APEAVEYGLVDSILTHRN 207 A EA++YG+VD + T + Sbjct: 178 AEEAIKYGIVDKLATKID 195 >UniRef50_A7ATV1 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Babesia bovis RepID=A7ATV1_BABBO Length = 225 Score = 194 bits (492), Expect = 2e-48, Method: Composition-based stats. Identities = 87/169 (51%), Positives = 123/169 (72%) Query: 38 LKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIYDTMQFI 97 ++ R +FL+G++ D + ++ Q+ + ENP ++I YINSPGG ++AG++IYD +Q + Sbjct: 44 IRTRTLFLSGELNDEKSYRLINQIFRMNEENPNENIKFYINSPGGSVSAGLAIYDILQSL 103 Query: 98 KPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREIL 157 K V TIC+GQAASMGAFLL AGAKG R +PNSR+MIHQPLGG G+ TDI+I A EIL Sbjct: 104 KMRVETICIGQAASMGAFLLAAGAKGLRSAMPNSRIMIHQPLGGAHGEVTDIKIQANEIL 163 Query: 158 KVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEAVEYGLVDSILTHR 206 ++ +N + TG+S+EQ+E+D ERD ++ EA+EYGL+D I T R Sbjct: 164 HIRQILNAHFSHFTGKSIEQVEQDCERDYYMRPSEAMEYGLIDRICTTR 212 >UniRef50_Q2K5Q0 ATP-dependent Clp protease proteolytic subunit 3 n=43 Tax=Bacteria RepID=CLPP3_RHIEC Length = 194 Score = 193 bits (491), Expect = 3e-48, Method: Composition-based stats. Identities = 81/175 (46%), Positives = 120/175 (68%), Gaps = 1/175 (0%) Query: 32 DIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIY 91 + + L K R IF+ G + +A + +Q++ L A + ++DI +Y+NSPGG + +G SI+ Sbjct: 18 ETEANLFKSRSIFIYGPINQELAQKVCSQLVALAAAS-DEDIRIYVNSPGGHVESGDSIH 76 Query: 92 DTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEI 151 D ++FIKP V I G AS GA + A + +R CLPN+R ++HQP GG +G A+DIEI Sbjct: 77 DMVKFIKPKVWMIGTGWVASAGALIYVAAPRERRLCLPNTRFLLHQPSGGTRGMASDIEI 136 Query: 152 HAREILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEAVEYGLVDSILTHR 206 AREI+K+ R+N++MA TGQ LE+I +DT+RD +LSA EA +YGLV I+T + Sbjct: 137 QAREIIKMNERLNKIMAEATGQPLEKIAKDTDRDYWLSAEEAKDYGLVSRIVTSQ 191 >UniRef50_C5C3N3 ATP-dependent Clp protease proteolytic subunit n=3 Tax=Actinomycetales RepID=C5C3N3_BEUC1 Length = 197 Score = 193 bits (490), Expect = 4e-48, Method: Composition-based stats. Identities = 87/194 (44%), Positives = 138/194 (71%) Query: 13 HMALVPMVIEQTSRGERSFDIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKD 72 +P V+E+ ER+ D++SRLL +R+++L +++ +AN+++AQ++ LE++NP+ Sbjct: 2 SSYTIPYVVEKRPGSERAMDVFSRLLSDRIVYLGTAIDEGVANVLIAQLIHLESDNPDLP 61 Query: 73 IYLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSR 132 I+LYINSPGG I A +S+YD MQ+++P V+T C+GQAA+ A LL GAKG+R L + R Sbjct: 62 IHLYINSPGGDIPATLSVYDAMQYVRPPVATTCLGQAATTAALLLAGGAKGQRSILSHGR 121 Query: 133 VMIHQPLGGYQGQATDIEIHAREILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPE 192 V++HQP G +G D+ + A EI++V+ ++ E+++ HTGQS+E + RDT+R+ L A Sbjct: 122 VVLHQPTGQGRGTVPDLILAADEIVRVRSQLEEVLSAHTGQSVETLRRDTDRELILDAER 181 Query: 193 AVEYGLVDSILTHR 206 A YG+VD ILT R Sbjct: 182 AKAYGVVDHILTER 195 >UniRef50_C1FE28 ATP-dependent Clp protease proteolytic subunit (Fragment) n=1 Tax=Micromonas sp. RCC299 RepID=C1FE28_9CHLO Length = 289 Score = 192 bits (489), Expect = 4e-48, Method: Composition-based stats. Identities = 69/204 (33%), Positives = 120/204 (58%), Gaps = 8/204 (3%) Query: 7 RDNFAPHMALVPMVIEQTSRGERSFDIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEA 66 + N H++ V ++ + + D+ S + KER+++L + + LI+A++L+L+ Sbjct: 15 KSNRVLHISAVIPSLQGDASTQAPPDLPSFIFKERIVYLGMTLVPSVTELILAELLYLQY 74 Query: 67 ENPEKDIYLYINSPG--------GVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLT 118 E+ K IYLYINS G G T +IYDT++++ V T+ +G A A LL Sbjct: 75 EDKTKPIYLYINSTGTSKEGQKYGYDTEAFAIYDTIKYVNSPVHTVAVGTAWGEAAMLLA 134 Query: 119 AGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREILKVKGRMNELMALHTGQSLEQI 178 +G KG R LP++ +MI QP+ ++GQATD+EI +E+ K + EL++ + +E++ Sbjct: 135 SGEKGNRAALPSASIMIKQPIDAFRGQATDLEIQRKEMRNTKKQTLELLSKGINKPIEEL 194 Query: 179 ERDTERDRFLSAPEAVEYGLVDSI 202 E+D R ++ + EAV+YGL+D + Sbjct: 195 EKDINRPKYFNPWEAVDYGLIDKL 218 >UniRef50_Q01F73 ATP-dependent Clp protease proteolytic subunit (Fragment) n=1 Tax=Ostreococcus tauri RepID=Q01F73_OSTTA Length = 244 Score = 192 bits (488), Expect = 7e-48, Method: Composition-based stats. Identities = 70/204 (34%), Positives = 121/204 (59%), Gaps = 11/204 (5%) Query: 11 APHMALVPMVI---EQTSRGERSFDIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAE 67 AP ++ VI + + + D+ S + +ER+++L + + LI+A++L+L+ E Sbjct: 41 APRTRIIRAVIPSLQGDAATQSPPDLPSFIFQERIVYLGMTLVPSVTELILAELLYLQYE 100 Query: 68 NPEKDIYLYINSPG--------GVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTA 119 + +K I LYINS G G + +IYDT+Q++ P V TI +G A A LL + Sbjct: 101 DKKKPIQLYINSTGSSKDGKKYGYDSEAFAIYDTIQYVSPPVHTIAVGTAWGEAAMLLAS 160 Query: 120 GAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREILKVKGRMNELMALHTGQSLEQIE 179 G+KG+R LP++ +M+ QPL ++GQA+++EI +E+ K +M +++A TG+ + IE Sbjct: 161 GSKGQRAALPSASIMLKQPLSSFRGQASELEIQRQEMRNTKKQMLDILAKTTGRDIATIE 220 Query: 180 RDTERDRFLSAPEAVEYGLVDSIL 203 D R + EA++YGL+D +L Sbjct: 221 TDINRPLYFEPSEAIKYGLIDKVL 244 >UniRef50_Q06J25 ATP-dependent Clp protease proteolytic subunit n=2 Tax=Eukaryota RepID=CLPP_BIGNA Length = 195 Score = 191 bits (486), Expect = 1e-47, Method: Composition-based stats. Identities = 82/195 (42%), Positives = 131/195 (67%), Gaps = 2/195 (1%) Query: 13 HMALVPMVI--EQTSRGERSFDIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPE 70 +P V+ E T + DIY+RL K+R+IFL ++D +N I++ +L L++E+ E Sbjct: 1 MPIGIPKVLFKESTDTTPQWVDIYTRLYKDRIIFLFQLLDDDFSNQIISMLLHLDSESKE 60 Query: 71 KDIYLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPN 130 + IY YINS GG + +G+SIYDTM FI ++ T+C+G A+S+ + +L G + KRF LP+ Sbjct: 61 ELIYFYINSVGGSVLSGISIYDTMNFINSEIVTLCIGIASSISSLILANGKRTKRFILPH 120 Query: 131 SRVMIHQPLGGYQGQATDIEIHAREILKVKGRMNELMALHTGQSLEQIERDTERDRFLSA 190 SRV++HQP+ GQA+DI I + EIL+++ + ++ + Q++ ++ RD +RD FLS+ Sbjct: 121 SRVLLHQPIMQVSGQASDILIESEEILRLRRILTKIYIENIDQTISRVARDIDRDCFLSS 180 Query: 191 PEAVEYGLVDSILTH 205 EA YG+VD ILT+ Sbjct: 181 REAKNYGIVDYILTN 195 >UniRef50_C1N254 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Micromonas pusilla CCMP1545 RepID=C1N254_9CHLO Length = 195 Score = 191 bits (485), Expect = 1e-47, Method: Composition-based stats. Identities = 79/168 (47%), Positives = 116/168 (69%) Query: 38 LKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIYDTMQFI 97 + +R IFL G+V+D A+ +V +MLFL+A +PE I LY+NS GGV+T+G++IYD MQ + Sbjct: 1 MGQRRIFLNGRVDDKSAHSLVGKMLFLDAVDPETPIVLYVNSGGGVVTSGLAIYDVMQHV 60 Query: 98 KPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREIL 157 +P V T+C+G A SM A LL AG KG R+ LPN+RVM+HQP GQ TDI I A + Sbjct: 61 RPPVYTVCIGHAESMAAVLLCAGEKGHRYVLPNARVMVHQPHHVISGQTTDILIKATKAE 120 Query: 158 KVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEAVEYGLVDSILTH 205 + + +++A H+G+S ++ ERD +++A EAV +GL D ++TH Sbjct: 121 HTRTTLRDIIAKHSGRSAGEVIGVLERDTYMTAAEAVTFGLADEVITH 168 >UniRef50_Q7NEW1 ATP-dependent Clp protease proteolytic subunit 2 n=22 Tax=Cyanobacteria RepID=CLPP2_GLOVI Length = 218 Score = 190 bits (483), Expect = 3e-47, Method: Composition-based stats. Identities = 79/169 (46%), Positives = 122/169 (72%), Gaps = 2/169 (1%) Query: 39 KERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPG--GVITAGMSIYDTMQF 96 ER+++L + D +A L++AQ+L+LE+E+ K I +YINSPG G T+ ++YDTM+ Sbjct: 35 NERIVYLGTPINDVVAELLIAQLLYLESEDNAKPIEIYINSPGVAGFETSAFAVYDTMRH 94 Query: 97 IKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREI 156 ++ + TIC+G A A L+ AG KG+R LPNSR++++QP GG +GQATDI I A+E+ Sbjct: 95 VRMPIKTICLGLAGGFSALLMAAGTKGQRMSLPNSRIILYQPYGGARGQATDINIRAQEL 154 Query: 157 LKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEAVEYGLVDSILTH 205 L K +N+L+++HTG+++EQI++DTER ++S EAV YGL+D +L Sbjct: 155 LTTKRTLNQLLSIHTGKTVEQIDKDTERLFYMSPQEAVSYGLIDKVLEP 203 >UniRef50_B8AMH6 ATP-dependent Clp protease proteolytic subunit n=4 Tax=Poaceae RepID=B8AMH6_ORYSI Length = 464 Score = 190 bits (482), Expect = 3e-47, Method: Composition-based stats. Identities = 86/138 (62%), Positives = 111/138 (80%) Query: 68 NPEKDIYLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFC 127 N +DI +Y+NSPGG +TAGM+I+DTM+ I+PDVST+C+G AASMGAFLL+AG KGKR+ Sbjct: 315 NLTEDIIMYVNSPGGSVTAGMAIFDTMKHIRPDVSTVCIGLAASMGAFLLSAGTKGKRYS 374 Query: 128 LPNSRVMIHQPLGGYQGQATDIEIHAREILKVKGRMNELMALHTGQSLEQIERDTERDRF 187 LPNSR+MIHQPLGG QGQ TD+EI A E+L K +N +A HTGQ L++I DT+RD F Sbjct: 375 LPNSRIMIHQPLGGAQGQETDLEIQANEMLHHKANLNGYLAYHTGQPLDKINVDTDRDYF 434 Query: 188 LSAPEAVEYGLVDSILTH 205 +SA EA EYGL+D ++ + Sbjct: 435 MSAKEAKEYGLIDGVIMN 452 >UniRef50_A0LYF8 ATP-dependent Clp protease proteolytic subunit n=10 Tax=Bacteroidetes RepID=A0LYF8_GRAFK Length = 186 Score = 189 bits (481), Expect = 5e-47, Method: Composition-based stats. Identities = 81/173 (46%), Positives = 124/173 (71%), Gaps = 1/173 (0%) Query: 33 IYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIYD 92 I ++LL++R I++ G+V D A ++ ++ +L+ E + +I L+INSPGG +T G +IYD Sbjct: 15 IDNKLLEKRKIYMWGEVSDKTAKYVIDRLEYLDLEG-DGEIQLFINSPGGYVTDGFAIYD 73 Query: 93 TMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIH 152 T+ ++ VSTIC G AASMG+ LL+AG KG+RF P+++VMIHQP GG +GQA++IEI Sbjct: 74 TIMSLESPVSTICTGLAASMGSILLSAGKKGRRFIQPHAKVMIHQPSGGARGQASNIEIA 133 Query: 153 AREILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEAVEYGLVDSILTH 205 A EILK K E++A + GQS++++ +D RD ++ A E++EYG+VD I Sbjct: 134 ANEILKTKHLSAEIIAENCGQSVDKVLKDFNRDYWMDAEESMEYGIVDGIFKK 186 >UniRef50_A7AQC7 ATP-dependent Clp protease proteolytic subunit n=4 Tax=Piroplasmida RepID=A7AQC7_BABBO Length = 245 Score = 189 bits (480), Expect = 5e-47, Method: Composition-based stats. Identities = 73/189 (38%), Positives = 125/189 (66%), Gaps = 2/189 (1%) Query: 17 VPMVIEQTSRGER--SFDIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIY 74 VP+V + +R DI++RL +ER++F++ +++ N+I+ +L L++++ EK I Sbjct: 51 VPLVEYKIPGTQRSEFHDIHTRLYRERILFVSQSLDESYTNMIIGTLLCLDSDSNEKPIT 110 Query: 75 LYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVM 134 LYINS GG TAG+++YDT++ +K ++TI +G ++ + LL +G G R LP+SRV+ Sbjct: 111 LYINSQGGPSTAGITLYDTIKHLKSKIATINVGFCSATASLLLASGTPGMRSALPHSRVV 170 Query: 135 IHQPLGGYQGQATDIEIHAREILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEAV 194 +HQP G +G A I A+ +L +K + +L + T Q L+ I +D ER++F+SA E++ Sbjct: 171 MHQPAGTLEGSAEQIRSQAQYMLNMKRILQKLYSQVTNQPLDNIAKDLEREQFMSAEESL 230 Query: 195 EYGLVDSIL 203 +YGLVD I+ Sbjct: 231 QYGLVDRII 239 >UniRef50_O97252 ATP-dependent Clp protease proteolytic subunit n=2 Tax=Plasmodium RepID=O97252_PLAF7 Length = 370 Score = 189 bits (479), Expect = 8e-47, Method: Composition-based stats. Identities = 73/175 (41%), Positives = 114/175 (65%), Gaps = 1/175 (0%) Query: 32 DIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIY 91 D+ K+R+I+LT ++ A+ +++Q+L+L+ N DI +YINSPGG I G++I Sbjct: 186 DVKLFFFKKRIIYLTDEINKKTADELISQLLYLDNINHN-DIKIYINSPGGSINEGLAIL 244 Query: 92 DTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEI 151 D +IK D+ TI G ASM + +L +G KGKR LPN R+MIHQPLG G DIEI Sbjct: 245 DIFNYIKSDIQTISFGLVASMASVILASGKKGKRKSLPNCRIMIHQPLGNAFGHPQDIEI 304 Query: 152 HAREILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEAVEYGLVDSILTHR 206 +EIL +K + ++ T Q++E IE+D++RD +++A EA +YG++D ++ + Sbjct: 305 QTKEILYLKKLLYHYLSSFTNQTVETIEKDSDRDYYMNALEAKQYGIIDEVIETK 359 >UniRef50_Q6ME32 ATP-dependent Clp protease proteolytic subunit 1 n=15 Tax=Chlamydiales RepID=CLPP1_PARUW Length = 206 Score = 188 bits (477), Expect = 1e-46, Method: Composition-based stats. Identities = 69/175 (39%), Positives = 111/175 (63%), Gaps = 2/175 (1%) Query: 33 IYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIYD 92 I +L R IF++ V+ A+ I+ ++ +LE +P K I INSPGG + +G +I+D Sbjct: 25 IEHAILDSRRIFISDAVDSGSASEIIRKLWYLELTDPGKPILFVINSPGGAVDSGFAIWD 84 Query: 93 TMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQP--LGGYQGQATDIE 150 ++ I V+T+ G AASMG+ L + G+RF P+SR+MIHQP G +GQATD+E Sbjct: 85 QIKMITSPVTTLVTGLAASMGSILSLCASPGRRFATPHSRIMIHQPLLSGVIKGQATDLE 144 Query: 151 IHAREILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEAVEYGLVDSILTH 205 I A+E+LK + + E+ TG++ IE+ +RD +++A EA+E+GL+D ++ Sbjct: 145 IQAKEMLKTRNGLIEIYVQATGKNFAAIEKAIDRDTWMTAQEALEFGLLDKVINS 199 >UniRef50_Q9L4P4 Putative ATP-dependent Clp protease proteolytic subunit-like n=29 Tax=cellular organisms RepID=CLPR_SYNE7 Length = 228 Score = 187 bits (476), Expect = 2e-46, Method: Composition-based stats. Identities = 80/188 (42%), Positives = 115/188 (61%), Gaps = 19/188 (10%) Query: 39 KERVIFLTGQ----------VEDHMANLIVAQMLFLEAENPEKDIYLYINSPG------- 81 KER+I+L V + LI+AQ+L+LE +NPEK IY YINS G Sbjct: 31 KERIIYLGMPLFSSDDVKRQVGFDVTELIIAQLLYLEFDNPEKPIYFYINSTGTSWYTGD 90 Query: 82 --GVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPL 139 G T +I DTM++IKP V TIC+GQA A +L+ G G R LP++ ++++QP Sbjct: 91 AIGYETEAFAICDTMRYIKPPVHTICIGQAMGTAAMILSGGTPGNRASLPHATIVLNQPR 150 Query: 140 GGYQGQATDIEIHAREILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEAVEYGLV 199 G QGQA+DI+I A+E+L K M E+ A +TGQ +++ RDT+R +++ +AVEYGL+ Sbjct: 151 TGAQGQASDIQIRAKEVLANKRTMLEIFARNTGQDPDRLARDTDRMLYMTPAQAVEYGLI 210 Query: 200 DSILTHRN 207 D +L R Sbjct: 211 DRVLDSRK 218 >UniRef50_Q1PYX1 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1PYX1_9BACT Length = 208 Score = 187 bits (475), Expect = 2e-46, Method: Composition-based stats. Identities = 75/176 (42%), Positives = 119/176 (67%), Gaps = 1/176 (0%) Query: 32 DIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIY 91 D+ +RLLK R I +T +V MA ++ Q+L LEA + ++DI ++INSPGG AG ++Y Sbjct: 30 DLIARLLKTRTIIVTDEVNKKMAERVITQLLLLEA-DNDEDIRVFINSPGGDADAGFAMY 88 Query: 92 DTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEI 151 D ++F+KP + IC G AS +L K R+ LP+SR++IHQP G G A+D++I Sbjct: 89 DMLRFVKPKIKAICSGVVASAAVIILLGAKKEDRYSLPSSRILIHQPSTGIHGTASDLQI 148 Query: 152 HAREILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEAVEYGLVDSILTHRN 207 A EILK + +MN ++++ TGQ + ++E DT+R+ ++SA EA +YGLV+ I++ + Sbjct: 149 EATEILKCREKMNRMISVETGQPIGKVETDTKRNFWMSAEEACQYGLVNKIISSSD 204 >UniRef50_A8INX1 ATP-dependent Clp protease proteolytic subunit n=2 Tax=Chlamydomonadales RepID=A8INX1_CHLRE Length = 283 Score = 187 bits (475), Expect = 2e-46, Method: Composition-based stats. Identities = 76/209 (36%), Positives = 116/209 (55%), Gaps = 4/209 (1%) Query: 2 SYSGERDNFAPHMALVPMVIE--QTSRGERSF--DIYSRLLKERVIFLTGQVEDHMANLI 57 S S R+ A + P+V Q GE + D+Y LL R+IF+ G + D MA I Sbjct: 42 SRSSRRNVEARGIRRSPVVTPDIQIGHGEDAIEMDLYRYLLSNRIIFIGGYINDKMATQI 101 Query: 58 VAQMLFLEAENPEKDIYLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLL 117 V ++ LEA + +DI +YINSPGG + + + D MQ IKPDV T+ +G S + ++ Sbjct: 102 VGSLMALEAVDENEDIRIYINSPGGQPYSVLGVVDAMQSIKPDVQTVALGACYSYASLVV 161 Query: 118 TAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREILKVKGRMNELMALHTGQSLEQ 177 AG KGKR+ + N+R+M+ QP+GG QG I+ E+ + + TG + +Q Sbjct: 162 AAGTKGKRYAMKNTRLMMTQPMGGSQGDIYQIKATVEELNALYQIFSRYYMKFTGMNQDQ 221 Query: 178 IERDTERDRFLSAPEAVEYGLVDSILTHR 206 IE+ T RD F++ +A GL+D I+ + Sbjct: 222 IEQATCRDHFMTPEQAKLEGLIDEIIRGK 250 >UniRef50_Q73JM9 ATP-dependent Clp protease proteolytic subunit 2 n=4 Tax=Treponema RepID=CLPP2_TREDE Length = 200 Score = 187 bits (474), Expect = 3e-46, Method: Composition-based stats. Identities = 77/186 (41%), Positives = 122/186 (65%) Query: 22 EQTSRGERSFDIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPG 81 E+ ++ + + L R I L G++ ++ IV Q+L +E+ + K IY+YI+SPG Sbjct: 10 EKKNKTNDDDALMQKFLNTRQIILAGEINKELSEKIVRQLLLMESLSATKPIYIYIDSPG 69 Query: 82 GVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGG 141 G AG +I+D ++FIK V TI MG AS + +L A +K +RF +PNS +IHQPL G Sbjct: 70 GDADAGFAIFDMIRFIKAPVYTIGMGLVASAASIILLAASKERRFGMPNSHYLIHQPLSG 129 Query: 142 YQGQATDIEIHAREILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEAVEYGLVDS 201 +G AT+IEIHA+E+ K++ ++N+L+A TG +++ +DT+RD +L+A E+VEYGL+ Sbjct: 130 IKGVATEIEIHAKELEKMRVKINKLIAEETGTDEKKVAKDTDRDCWLNAKESVEYGLISK 189 Query: 202 ILTHRN 207 I +R Sbjct: 190 IAKNRK 195 >UniRef50_B9F8Z4 ATP-dependent Clp protease proteolytic subunit n=12 Tax=Magnoliophyta RepID=B9F8Z4_ORYSJ Length = 278 Score = 187 bits (474), Expect = 3e-46, Method: Composition-based stats. Identities = 71/223 (31%), Positives = 122/223 (54%), Gaps = 19/223 (8%) Query: 3 YSGERDNFAPHMALVPMVIEQTSRGERSFDIYSRLLKERVIFLTGQVEDHMANLIVAQML 62 S ++ P ++ + D+ + LL R+IF+ + +A +++Q++ Sbjct: 55 SSLRKNTIVASENENPPLMPAIMTPAGALDLATVLLGNRIIFIGQYINSQVAQRVISQLV 114 Query: 63 FLEAENPEKDIYLYINSPGGVITAGMSIYDTMQF-------------------IKPDVST 103 L A + E DI +Y+N PGG + + ++IYD M + IKP V T Sbjct: 115 TLAAVDEEADILIYLNCPGGSLYSILAIYDCMSWYILDMSICHAETVLIGFGLIKPKVGT 174 Query: 104 ICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREILKVKGRM 163 +C G AS A +L G KG R+ +PN+RVMIHQP G +G ++ E + + ++ Sbjct: 175 VCFGVVASQAAIILAGGEKGMRYAMPNARVMIHQPQGVSEGNVEEVRRQVGETIYARDKV 234 Query: 164 NELMALHTGQSLEQIERDTERDRFLSAPEAVEYGLVDSILTHR 206 +++ A TGQ+L+ +++ TERDRF+S+ EA+++GLVD++L R Sbjct: 235 DKMFAAFTGQTLDMVQQWTERDRFMSSSEAMDFGLVDALLETR 277 >UniRef50_Q36863 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Cyanophora paradoxa RepID=CLPP1_CYAPA Length = 194 Score = 187 bits (474), Expect = 3e-46, Method: Composition-based stats. Identities = 91/194 (46%), Positives = 128/194 (65%), Gaps = 3/194 (1%) Query: 17 VPMVIEQTSRGERS---FDIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDI 73 + ++I+Q + E + S+LL+ R+I + V+D + N IV Q+L+LE E+ KDI Sbjct: 1 MTILIQQYTNDENKKLELNNISKLLQNRIILFSQTVDDEICNSIVGQLLYLENEDSTKDI 60 Query: 74 YLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRV 133 L+INSPGG +TAG+S+YDT+Q + DVSTIC G AASMGA LL AG + KRF +SR+ Sbjct: 61 RLFINSPGGSVTAGLSVYDTIQNLSVDVSTICFGLAASMGAVLLAAGVENKRFAFASSRI 120 Query: 134 MIHQPLGGYQGQATDIEIHAREILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEA 193 MIHQPL + + ++I R K +N +++ HT Q L+QIE DTERD FLSA EA Sbjct: 121 MIHQPLSKVEAPWSHLDIQIRNGAYFKNLLNNILSFHTKQELKQIETDTERDFFLSATEA 180 Query: 194 VEYGLVDSILTHRN 207 +YG++D I + N Sbjct: 181 KQYGIIDHIFINNN 194 >UniRef50_A4W647 ATP-dependent Clp protease proteolytic subunit n=5 Tax=Bacteria RepID=A4W647_ENT38 Length = 201 Score = 187 bits (474), Expect = 3e-46, Method: Composition-based stats. Identities = 79/175 (45%), Positives = 124/175 (70%), Gaps = 1/175 (0%) Query: 33 IYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIYD 92 + +LL+ R I ++G+++ +A ++ QM+ L++ + + I LYINS GG + AG +I+D Sbjct: 23 LQQKLLESRSIIISGEIDQALAEKVITQMILLQSVSND-PIKLYINSQGGHVEAGDTIHD 81 Query: 93 TMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIH 152 ++FI+PDV I G AS G + A K R+ LPN+R MIHQPLGG +GQATDIEI Sbjct: 82 FIKFIRPDVHVIGTGWVASAGITIFLAAKKEHRYALPNTRFMIHQPLGGVRGQATDIEIE 141 Query: 153 AREILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEAVEYGLVDSILTHRN 207 AREI+++ R+N+L+A TGQ LE++++DT+R+ ++S EA++YG+V I+TH + Sbjct: 142 AREIIRMLERVNKLIADATGQPLEKVKKDTDRNFWMSPGEALDYGIVGKIITHYD 196 >UniRef50_B4WHH0 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Synechococcus sp. PCC 7335 RepID=B4WHH0_9SYNE Length = 230 Score = 186 bits (473), Expect = 3e-46, Method: Composition-based stats. Identities = 80/209 (38%), Positives = 124/209 (59%), Gaps = 19/209 (9%) Query: 18 PMVIEQTSRGERSFDIYSRLLKERVIFLTGQ----------VEDHMANLIVAQMLFLEAE 67 P + D+ S LLKER+++L + + LI+AQ+L+LE + Sbjct: 11 PYGGGSAAYRTPPPDLQSLLLKERIVYLGTPLVSSDDFKRQMGVDVTKLIIAQLLYLEFD 70 Query: 68 NPEKDIYLYINSPG---------GVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLT 118 +PEK IY YINS G G T +I DT+++IKP V TIC+GQA A +L+ Sbjct: 71 DPEKPIYFYINSTGTSWYTGDAVGFETEAFAICDTLKYIKPPVHTICLGQAMGTAAMILS 130 Query: 119 AGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREILKVKGRMNELMALHTGQSLEQI 178 +GAKG R LP++ ++++Q G QGQATDI+I A E+L K ++++ +TGQS E++ Sbjct: 131 SGAKGSRASLPHATIVLNQTRSGAQGQATDIQIRAEEVLANKAAQLDILSANTGQSTEKL 190 Query: 179 ERDTERDRFLSAPEAVEYGLVDSILTHRN 207 ++DT+R +L+ EA +YGL+D +L+ Sbjct: 191 DKDTDRMFYLTPEEAKDYGLIDRVLSSTK 219 >UniRef50_Q8UD57 ATP-dependent Clp protease proteolytic subunit 3 n=16 Tax=Proteobacteria RepID=CLPP3_AGRT5 Length = 201 Score = 186 bits (472), Expect = 5e-46, Method: Composition-based stats. Identities = 74/176 (42%), Positives = 115/176 (65%), Gaps = 1/176 (0%) Query: 32 DIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIY 91 + + L K R IF+ G + +A + Q++ L A + + DI +Y+NSPGG + +G SI+ Sbjct: 25 ETEANLFKSRSIFIYGGITQELAQKVCTQLVALAAASDD-DIRVYVNSPGGHVESGDSIH 83 Query: 92 DTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEI 151 D ++FIKP V I G AS GA + + K +R CLPN+R ++HQP GG +G A+DIEI Sbjct: 84 DMIKFIKPKVYIIGTGWVASAGALIYVSVPKERRLCLPNTRFLLHQPSGGTRGMASDIEI 143 Query: 152 HAREILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEAVEYGLVDSILTHRN 207 AREI+K+ R+ ++ + TGQ+ E+I +D +RD +LSA +A +YGLV I+ ++ Sbjct: 144 QAREIIKMNQRLIKIFSKATGQTEEKIAKDIDRDYWLSADDAKDYGLVGKIVESQS 199 >UniRef50_Q3LWG6 ATP-dependent Clp protease proteolytic subunit n=2 Tax=Bigelowiella natans RepID=Q3LWG6_BIGNA Length = 264 Score = 186 bits (472), Expect = 5e-46, Method: Composition-based stats. Identities = 78/177 (44%), Positives = 113/177 (63%) Query: 31 FDIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSI 90 DI +F TG++ D + N ++ +LFL ++ I L INSPGG I AG+++ Sbjct: 57 LDISDFFENNNFLFCTGEINDQLVNSLINSILFLSYKDNNSSIKLCINSPGGSIMAGLAL 116 Query: 91 YDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIE 150 YD + + +TI +G AASMGAFLL +G G RF PN+R+MIHQP+GG QG A DIE Sbjct: 117 YDAIVWTNKSTNTISLGLAASMGAFLLASGTNGLRFSTPNTRIMIHQPIGGIQGNAVDIE 176 Query: 151 IHAREILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEAVEYGLVDSILTHRN 207 I +E+L + +N L++ T QSL IE DT+RD++++ EA EYG++D +L R+ Sbjct: 177 IQVKELLYHRNNINYLLSKFTDQSLSMIESDTDRDKYMTPLEAKEYGIIDRVLNCRD 233 >UniRef50_B9YN00 ATP-dependent Clp protease proteolytic subunit n=3 Tax=Nostocaceae RepID=B9YN00_ANAAZ Length = 220 Score = 185 bits (471), Expect = 6e-46, Method: Composition-based stats. Identities = 77/205 (37%), Positives = 126/205 (61%), Gaps = 15/205 (7%) Query: 17 VPMVIEQTSRGERSFDIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLY 76 VP I + + I R+ +ER++FL + +AN +++ +L+L++E+ K IYLY Sbjct: 9 VPYNIPGS-NQWQWISIGQRMTQERILFLNQPLTTSLANSLISSILYLDSEDQSKPIYLY 67 Query: 77 INSPGGVITAG--------------MSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAK 122 INS G + AG ++IYDTMQ+IK +V TIC GQA M A +L++GAK Sbjct: 68 INSLGDPVLAGRIDETAGMMSIKSCLAIYDTMQYIKSEVVTICFGQAVGMAALILSSGAK 127 Query: 123 GKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREILKVKGRMNELMALHTGQSLEQIERDT 182 GKR LP++ + + Q QGQATDI+++A E+L+ + + ++ + +TGQ ++I +D+ Sbjct: 128 GKRVSLPHASIALTQFQVAAQGQATDIQVNAEEVLRKRAIILDIFSQNTGQPADKITKDS 187 Query: 183 ERDRFLSAPEAVEYGLVDSILTHRN 207 ER +++ EA EYGL+D +L + Sbjct: 188 ERIFYMTPLEAKEYGLIDRVLENSK 212 >UniRef50_Q3AVC4 ATP-dependent Clp protease proteolytic subunit n=9 Tax=Cyanobacteria RepID=Q3AVC4_SYNS9 Length = 223 Score = 185 bits (470), Expect = 8e-46, Method: Composition-based stats. Identities = 78/188 (41%), Positives = 122/188 (64%), Gaps = 19/188 (10%) Query: 39 KERVIFLTGQ----------VEDHMANLIVAQMLFLEAENPEKDIYLYINSPG------- 81 KER+++L + + LI+AQ+LFLE ++PEK IY YINS G Sbjct: 27 KERIVYLGLPLFSDDDAKRQMGIDVTELIIAQLLFLEFDDPEKPIYFYINSTGTSWYSGD 86 Query: 82 --GVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPL 139 G T +I DT++++KP V TIC+GQA A +L+AG KG+R LP+S +++HQP Sbjct: 87 AIGFETEAFAICDTLRYVKPPVHTICIGQAMGTAAVILSAGTKGQRAALPHSSIVLHQPR 146 Query: 140 GGYQGQATDIEIHAREILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEAVEYGLV 199 G QGQATDI+I A+E+L K M E+++ +TG+++E++ ++++R +L+ EAVE+GL+ Sbjct: 147 SGAQGQATDIQIRAKEVLHNKQAMLEILSNNTGRTVEELSKNSDRMSYLTPHEAVEFGLI 206 Query: 200 DSILTHRN 207 D +L+ R Sbjct: 207 DRVLSSRK 214 >UniRef50_B0LP85 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Lychnis abyssinica RepID=B0LP85_9CARY Length = 372 Score = 185 bits (470), Expect = 8e-46, Method: Composition-based stats. Identities = 71/198 (35%), Positives = 113/198 (57%), Gaps = 6/198 (3%) Query: 9 NFAPHMALVPMVIEQTSRGERSFDIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAEN 68 N P +P + D+Y L +ER +FL +++ +AN + A ML+L ++ Sbjct: 178 NPIPIGTKLPDKTKDE-----WMDLYECLYEERYLFLGDEIKIELANKVSALMLYLSIQD 232 Query: 69 PEKDIYLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCL 128 P KD+ L+INSPGG + +G+ ++D MQF++ DV TIC G AAS + +L G KR Sbjct: 233 PNKDMRLFINSPGGGLISGIVLFDMMQFVRADVCTICYGLAASTASLVLLGGELTKRSAF 292 Query: 129 PNSRVMIHQPLGGYQGQATDI-EIHAREILKVKGRMNELMALHTGQSLEQIERDTERDRF 187 N+RVMIHQP + + + I +RE+LK++ ++ ++ T + I D ERD F Sbjct: 293 ANARVMIHQPASAFFKDKSRLFAIDSRELLKLREQVTQIYIQRTKKPEWLIWEDMERDTF 352 Query: 188 LSAPEAVEYGLVDSILTH 205 +S EA+++G+VD I Sbjct: 353 MSPEEALDHGIVDYITYE 370 >UniRef50_Q6C1Y5 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Yarrowia lipolytica RepID=Q6C1Y5_YARLI Length = 263 Score = 185 bits (469), Expect = 9e-46, Method: Composition-based stats. Identities = 79/242 (32%), Positives = 127/242 (52%), Gaps = 43/242 (17%) Query: 8 DNFAPHMALVPMVIEQTSRGE-RSFDIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEA 66 + P + + V ++ + DI ++LL ER++ + G ++D MA +VAQ+L+LE Sbjct: 20 SSRVPRVRQLAAVTQKRRYSDFSIHDIPAKLLNERIVHVAGPIDDSMATSVVAQLLYLEH 79 Query: 67 ENPEKDIYLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRF 126 ++ +K I++YINSPGG +TAG +I DTM +I+ V T+C+GQAASM + LLT GA G R Sbjct: 80 KSAQKPIHMYINSPGGAVTAGFAILDTMNYIRSPVHTVCLGQAASMASLLLTCGAPGNRI 139 Query: 127 CLPNSRVMIHQPLGGYQGQATDIEIHAREILKVKGRMNELM----------------ALH 170 PNS +M H+PLGG G + +E+H + +++ R+ +L A Sbjct: 140 MTPNSTIMTHEPLGGIVGSSKLVELHTFHLQRIRTRIIQLYYDSMKLGLEGRLKEEGAEE 199 Query: 171 TGQSLE--------------------------QIERDTERDRFLSAPEAVEYGLVDSILT 204 T ++ E ++ D+F +A EA++ GLVD IL Sbjct: 200 THEAAEPTPLMSLLSSDRSWIDTINQKTLTHSLVDTLIGLDQFFNADEALKLGLVDRILK 259 Query: 205 HR 206 + Sbjct: 260 TK 261 >UniRef50_Q06FP3 ATP-dependent Clp protease proteolytic subunit n=5 Tax=eudicotyledons RepID=CLPP_PELHO Length = 219 Score = 183 bits (465), Expect = 3e-45, Method: Composition-based stats. Identities = 70/196 (35%), Positives = 110/196 (56%), Gaps = 1/196 (0%) Query: 8 DNFAPHMALVPMVIEQTSRGERSFDIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAE 67 N P V ++ D+Y+RL ++R +FL +E+ +AN IV M+ L E Sbjct: 13 PNPDPEPDSVEEELDSMEEKATWVDLYNRLYRQRWLFLGKDLEEEVANNIVGLMIHLNIE 72 Query: 68 NPEKDIYLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFC 127 +P LYIN GG+I G+++YDT+ F++PDV TIC+G AASM + +L G +R Sbjct: 73 DPFWTQTLYINCLGGLIIPGLALYDTIGFVEPDVKTICLGIAASMASVVLVGGTVTERCA 132 Query: 128 LPNSRVMIHQPLGG-YQGQATDIEIHAREILKVKGRMNELMALHTGQSLEQIERDTERDR 186 PN+RVMIHQP + + +D+ + L+++ + ++ T + I D ERD Sbjct: 133 FPNARVMIHQPRAKEFDDRFSDLNLEGHLFLQLRNCVTQIYIHRTNKPAWVIIADLERDT 192 Query: 187 FLSAPEAVEYGLVDSI 202 F+SA EA YG++D + Sbjct: 193 FMSATEARTYGIIDGV 208 >UniRef50_B1X4K7 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Paulinella chromatophora RepID=B1X4K7_PAUCH Length = 225 Score = 182 bits (462), Expect = 6e-45, Method: Composition-based stats. Identities = 86/207 (41%), Positives = 131/207 (63%), Gaps = 10/207 (4%) Query: 1 MSYSGERDNFAPHMALVPMVIEQTSRGERSFDIYS--RLLKERVIFLTGQVEDHMANLIV 58 M +N++P + + E +YS + ++R+I ++ ++ D A+ I+ Sbjct: 23 MQSLDSSNNYSP--------LLEQEYRESVKGLYSIPKNTEDRIILISEEMNDEDASDII 74 Query: 59 AQMLFLEAENPEKDIYLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLT 118 AQ+L LEAENP++DI +YIN GG + + IYDTMQ IKPDV T+C G A M FLL+ Sbjct: 75 AQLLMLEAENPDEDIQVYINCMGGSMYGFVGIYDTMQAIKPDVVTLCYGSAFEMSGFLLS 134 Query: 119 AGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREILKVKGRMNELMALHTGQSLEQI 178 GAKGKR LPN+R+M++QP + G TD++++ +E++ ++ + L+A HTGQ E++ Sbjct: 135 GGAKGKRLALPNARIMLNQPETSFYGCITDLQLYNKELMLMRKNICSLIAAHTGQRFEKV 194 Query: 179 ERDTERDRFLSAPEAVEYGLVDSILTH 205 DT RD+F SA EA+EYGL+D IL Sbjct: 195 TADTNRDQFFSAAEAIEYGLIDRILNK 221 >UniRef50_O51698 ATP-dependent Clp protease proteolytic subunit 2 n=20 Tax=Borrelia RepID=CLPP2_BORBU Length = 206 Score = 182 bits (461), Expect = 8e-45, Method: Composition-based stats. Identities = 68/170 (40%), Positives = 111/170 (65%) Query: 37 LLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIYDTMQF 96 +LK R I + G++ ++ L ++L LEA + +K I++YI+S GG I AG +I++ ++F Sbjct: 28 VLKSRSIVIAGEITKDVSRLFQEKILLLEALDFKKPIFVYIDSEGGDIDAGFAIFNMIRF 87 Query: 97 IKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREI 156 +KP V T+ +G AS A + A RF LP +R ++HQPL G++G ATDIEI+ E+ Sbjct: 88 VKPKVFTVGVGLVASAAALIFLAAKLENRFSLPFARYLLHQPLSGFKGVATDIEIYTNEL 147 Query: 157 LKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEAVEYGLVDSILTHR 206 KVK +N +++ TGQ + +IE+DT+RD +L + A +YGLV ++ + Sbjct: 148 NKVKKELNNIISKETGQKISKIEKDTDRDFWLDSSAAKKYGLVFEVVETK 197 >UniRef50_C9RRI3 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Fibrobacter succinogenes subsp. succinogenes S85 RepID=C9RRI3_FIBSS Length = 193 Score = 181 bits (460), Expect = 1e-44, Method: Composition-based stats. Identities = 92/168 (54%), Positives = 123/168 (73%), Gaps = 3/168 (1%) Query: 37 LLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIYDTMQF 96 L +R IFL G V+D A IV Q+L+L++ N +DI +INSPGGVI++G++IYD M Sbjct: 23 LASKRRIFLWGGVDDESAERIVKQLLYLDSLNH-EDIIFFINSPGGVISSGLAIYDCMNA 81 Query: 97 IKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPL--GGYQGQATDIEIHAR 154 I+ DV T+C GQAASMGA LLTAGAKGKR PN+R+MIHQPL G A+DI+I A Sbjct: 82 IQSDVVTVCCGQAASMGAVLLTAGAKGKRCAWPNARIMIHQPLIHGEIVAPASDIQIQAE 141 Query: 155 EILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEAVEYGLVDSI 202 E+L+++G +++A +G ++EQI+RDTERD F+SA EA YGLVD + Sbjct: 142 EMLRIRGITGKILAETSGHTIEQIDRDTERDNFMSAEEARNYGLVDKV 189 >UniRef50_Q06R14 ATP-dependent Clp protease proteolytic subunit n=4 Tax=Jasminum RepID=Q06R14_9LAMI Length = 261 Score = 181 bits (459), Expect = 2e-44, Method: Composition-based stats. Identities = 70/181 (38%), Positives = 112/181 (61%), Gaps = 1/181 (0%) Query: 23 QTSRGERSFDIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGG 82 + + E D+Y++L + ++FL ++E +AN I+A ML+L ++P + +Y +INSPGG Sbjct: 48 KAEKEEVWTDLYTKLYQLGILFLGEEIEFVVANEIIAAMLYLNMQDPLQRLYFFINSPGG 107 Query: 83 VITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQP-LGG 141 + G++IYD M++I ++ TIC GQAASM + LL +GAKG R P+S VM+HQP L Sbjct: 108 AVHDGLAIYDAMKYIDQEIHTICYGQAASMASVLLASGAKGHRGAYPHSMVMMHQPALAP 167 Query: 142 YQGQATDIEIHAREILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEAVEYGLVDS 201 +G+ + + +K R+ ++ T + IER ERD ++S EA EYG++D Sbjct: 168 TRGRLQRLVRERNCLNILKERIIDIYVCETRKDRLVIERTLERDHYMSPIEAREYGIIDK 227 Query: 202 I 202 I Sbjct: 228 I 228 >UniRef50_C7N490 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Slackia heliotrinireducens DSM 20476 RepID=C7N490_SLAHD Length = 197 Score = 180 bits (458), Expect = 2e-44, Method: Composition-based stats. Identities = 68/193 (35%), Positives = 117/193 (60%), Gaps = 4/193 (2%) Query: 13 HMALVPMVIEQTSRGERSFDIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKD 72 A P +I++++RG +F I ++L +R I G ++ + + Q+ +L+ E+P + Sbjct: 4 SSADTPNIIKESNRGYDTFRIVDKMLADREIACIGPIDAAQTDSLCLQLRYLQKEDPAAE 63 Query: 73 IYLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSR 132 I ++ NSPGG + +G++IYDTM+ + V T+C+G A SM A L +G +R LP+SR Sbjct: 64 ITIFFNSPGGEVQSGLAIYDTMRAVSCPVRTVCLGMAGSMAALLFISG--DQRDMLPHSR 121 Query: 133 VMIHQPL--GGYQGQATDIEIHAREILKVKGRMNELMALHTGQSLEQIERDTERDRFLSA 190 VMIH PL GG G A +++ A +++ + E++A HTG++++++ T D + A Sbjct: 122 VMIHDPLLQGGVSGSALEVKTIADNLMRTRDITAEIIAEHTGKTIDEVLETTAHDAYFEA 181 Query: 191 PEAVEYGLVDSIL 203 EAV YGL D ++ Sbjct: 182 EEAVAYGLADRVI 194 >UniRef50_Q8L770 ATP-dependent Clp protease proteolytic subunit-related protein 3, chloroplastic n=17 Tax=Viridiplantae RepID=CLPR3_ARATH Length = 330 Score = 179 bits (455), Expect = 4e-44, Method: Composition-based stats. Identities = 67/210 (31%), Positives = 120/210 (57%), Gaps = 17/210 (8%) Query: 11 APHMALVPMVIEQT------SRGERSFDIYSRLLKERVIFLTGQVEDHMANLIVAQMLFL 64 +P + P +E++ D+ S LL R++++ + + L+VA++++L Sbjct: 94 SPQLMSSPAQVERSVAYNEHRPRTPPPDLPSMLLDGRIVYIGMPLVPAVTELVVAELMYL 153 Query: 65 EAENPEKDIYLYINSPG---------GVITAGMSIYDTMQFIKPDVSTICMGQAASMGAF 115 + +P++ IY+YINS G G+ + G +IYD++ +K +V T+C+G A Sbjct: 154 QWLDPKEPIYIYINSTGTTRDDGETVGMESEGFAIYDSLMQLKNEVHTVCVGAAIGQACL 213 Query: 116 LLTAGAKGKRFCLPNSRVMIHQPLGGYQG--QATDIEIHAREILKVKGRMNELMALHTGQ 173 LL+AG KGKRF +P+++ MI QP G A+D+ I A+E++ + + EL++ HTG Sbjct: 214 LLSAGTKGKRFMMPHAKAMIQQPRVPSSGLMPASDVLIRAKEVITNRDILVELLSKHTGN 273 Query: 174 SLEQIERDTERDRFLSAPEAVEYGLVDSIL 203 S+E + R ++ AP+A E+G++D IL Sbjct: 274 SVETVANVMRRPYYMDAPKAKEFGVIDRIL 303 >UniRef50_B0LP81 ATP-dependent Clp protease proteolytic subunit n=2 Tax=Eukaryota RepID=B0LP81_9MYRT Length = 408 Score = 179 bits (454), Expect = 5e-44, Method: Composition-based stats. Identities = 73/189 (38%), Positives = 108/189 (57%), Gaps = 3/189 (1%) Query: 17 VPMVIEQTSRGER--SFDIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIY 74 VP V + E D+++ L + R +FL ++ + N I + M+FL ENP+K IY Sbjct: 5 VPRVAFRVPGDENASWVDLFNGLFRARSVFLGQELNEEGGNDIASLMIFLALENPKKSIY 64 Query: 75 LYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVM 134 ++NSPGG+ AG++I DTM F+ PDV T+ +G ASM +FLL G GKR + R M Sbjct: 65 FFLNSPGGLALAGLAISDTMDFVTPDVYTLGLGLVASMASFLLACGTPGKRRASDHMRAM 124 Query: 135 IHQPLGGYQGQAT-DIEIHAREILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEA 193 IHQP + +A + E RE+ ++ + + TGQ I+ D RD F+SA E+ Sbjct: 125 IHQPSSKFLNEAALNXEFSRRELQSIRDIVIKTYVEKTGQDARVIKEDLRRDSFMSATES 184 Query: 194 VEYGLVDSI 202 +YGLVD + Sbjct: 185 KDYGLVDDV 193 >UniRef50_D0L7Q6 ATP-dependent Clp protease proteolytic subunit n=4 Tax=Actinomycetales RepID=D0L7Q6_GORB4 Length = 231 Score = 178 bits (453), Expect = 7e-44, Method: Composition-based stats. Identities = 67/170 (39%), Positives = 103/170 (60%) Query: 34 YSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIYDT 93 L +R++ L ++D + + + AQM+ L E+P DI L+INSPGG + A ++I DT Sbjct: 42 IDNLRTQRILLLDTALDDEIGSELCAQMVLLSVEDPVADIALWINSPGGSVPAMLAIMDT 101 Query: 94 MQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHA 153 M+ I D+ T+ +G A S G FLL G GKRF LP+++V++HQ G G A DIE+ A Sbjct: 102 MRLIPNDIRTVNLGMAYSAGQFLLCCGTAGKRFILPHAKVLLHQGSAGIGGYAPDIELQA 161 Query: 154 REILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEAVEYGLVDSIL 203 ++ V+ + ++A TGQ E++ D+ RD +A EA+ YG VD + Sbjct: 162 DDLRHVRDTVLGIIAEQTGQPPERVFDDSLRDHVFTADEAIAYGFVDHLA 211 >UniRef50_B7FZS4 ATP-dependent Clp protease proteolytic subunit n=2 Tax=Bacillariophyta RepID=B7FZS4_PHATR Length = 309 Score = 178 bits (453), Expect = 7e-44, Method: Composition-based stats. Identities = 70/204 (34%), Positives = 124/204 (60%), Gaps = 8/204 (3%) Query: 4 SGERDNFAPHMALVPMVIEQTSRGERSFDIYSRLLKERVIFLTGQVEDHMANLIVAQMLF 63 + + +P + +P + + DI + + ++R +F++ +++ AN +++ ML+ Sbjct: 49 TIRMPSQSPQVPYMPP----GADYAQFIDIEAAMYRDRTLFISTFIDEETANSLISIMLY 104 Query: 64 LEAENPEKDIYLYINSPGGVITAGMSIYDTMQFI--KPDVSTICMGQAASMGAFLLTAGA 121 L E+P+ I +Y N PG ++ +++YD +Q K ++ T+ +G A MGAFL +AG Sbjct: 105 LRNESPKDPISMYFNVPGALLRPSLALYDLIQQTKQKCEIETVNLGLCAGMGAFLCSAGT 164 Query: 122 KGKRFCLPNSRVMIHQPLG--GYQGQATDIEIHAREILKVKGRMNELMALHTGQSLEQIE 179 KGKR +PNSR ++ + ++GQATDI + R + K RM E ++ TGQ LE+I+ Sbjct: 165 KGKRNAMPNSRFLLQRTGMDEVFRGQATDIALEVRNVKKWNDRMEEELSQMTGQPLERIQ 224 Query: 180 RDTERDRFLSAPEAVEYGLVDSIL 203 +D +RD +LS+ EAV+YGL+D +L Sbjct: 225 QDLKRDFYLSSDEAVQYGLIDRVL 248 >UniRef50_D1BUV7 ATP-dependent Clp protease proteolytic subunit n=4 Tax=Actinomycetales RepID=D1BUV7_XYLCX Length = 208 Score = 176 bits (447), Expect = 4e-43, Method: Composition-based stats. Identities = 68/167 (40%), Positives = 107/167 (64%) Query: 37 LLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIYDTMQF 96 L + RV+ L G ++D L+ Q++ L E+P DI L+I+SPGG + A ++I D ++ Sbjct: 18 LYERRVLVLDGVLDDDNGTLLATQLVTLAVEDPVADIALWIHSPGGSVPAMLAIRDLIRT 77 Query: 97 IKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREI 156 I DV+T+ +G AAS G FLL+AG +GKR LP++R+++HQ G G A DIE+ A ++ Sbjct: 78 IPNDVATLALGFAASAGQFLLSAGTRGKRRALPHARILLHQGSAGIGGTAVDIELQADDL 137 Query: 157 LKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEAVEYGLVDSIL 203 ++ + L+A TGQ E++ D+ D + +A EA EYG VD+I+ Sbjct: 138 RHMRDTVLGLIAQDTGQPPERVFEDSLHDHWFTAAEAQEYGFVDTIV 184 >UniRef50_Q4UAC9 ATP-dependent Clp protease proteolytic subunit n=2 Tax=Theileria RepID=Q4UAC9_THEAN Length = 271 Score = 175 bits (444), Expect = 8e-43, Method: Composition-based stats. Identities = 81/212 (38%), Positives = 125/212 (58%), Gaps = 39/212 (18%) Query: 33 IYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITA------ 86 + +K R+IFL+G++ D ++ I++ +L + +P+ I YINSPGG +T+ Sbjct: 59 LDEFYIKNRIIFLSGELNDKVSFKIISSILRINENDPKLPIKFYINSPGGSVTSGNFITQ 118 Query: 87 --------GMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQP 138 G++I+D ++ +K V TI +GQAASMGAFLL +G KG R+ +PNSR+MIHQP Sbjct: 119 FLHTLFFLGLAIFDILRSLKMPVETISLGQAASMGAFLLASGTKGMRYAMPNSRIMIHQP 178 Query: 139 LG-------------------------GYQGQATDIEIHAREILKVKGRMNELMALHTGQ 173 LG G GQA+DIEI A EIL+++ +N ++ TG+ Sbjct: 179 LGTLRCSVTVLAPAAPIITNPPKGLYRGAHGQASDIEIQANEILQIREILNTNLSNFTGK 238 Query: 174 SLEQIERDTERDRFLSAPEAVEYGLVDSILTH 205 S+E+IE+D RD ++ EA++YGL+D I+ Sbjct: 239 SVEEIEKDCSRDNYMRPSEALQYGLIDHIINT 270 >UniRef50_A8IS47 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Chlamydomonas reinhardtii RepID=A8IS47_CHLRE Length = 282 Score = 175 bits (443), Expect = 1e-42, Method: Composition-based stats. Identities = 66/207 (31%), Positives = 126/207 (60%), Gaps = 4/207 (1%) Query: 2 SYSGERDNFAPHMALVPMVI--EQTSRGERSFDIYSRLLKERVIFLTGQVEDHMANLIVA 59 S + +R VP V+ R D++ ++V+F+ + + +AN ++A Sbjct: 53 SGAPKRKVTTMMPVSVPKVLCRPPGQRQSEWVDLWEAYTYQKVVFIKEAITEDVANNMIA 112 Query: 60 QMLFLEAENPEKDIYLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTA 119 L+L++ + +K IY ++N PGG + +++YDTMQ+++ +T+C G MG FLLTA Sbjct: 113 LTLYLDSLD-QKRIYYWLNVPGGDVVPTLALYDTMQYVRSKTATVCYGLCLGMGGFLLTA 171 Query: 120 G-AKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREILKVKGRMNELMALHTGQSLEQI 178 G KG RF +P+S +M+H P G +GQA+++ I +RE+++++ ++ L + TGQ +++ Sbjct: 172 GGEKGYRFAMPHSILMMHHPSGASRGQASEMHIESRELVRMRDYLSLLTSNATGQPYDRV 231 Query: 179 ERDTERDRFLSAPEAVEYGLVDSILTH 205 R+ R++++ +A+EYG++D +LT Sbjct: 232 IRELSRNKWMDPKQAIEYGMIDKVLTT 258 >UniRef50_Q9MTJ8 ATP-dependent Clp protease proteolytic subunit n=7 Tax=Oenothera RepID=CLPP_OENEH Length = 249 Score = 175 bits (443), Expect = 1e-42, Method: Composition-based stats. Identities = 66/175 (37%), Positives = 101/175 (57%), Gaps = 2/175 (1%) Query: 30 SFDIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMS 89 D+Y+ L + R IFL + +AN I M+FL ++ +++Y +INSPGG+ AG+ Sbjct: 26 WVDLYNVLYRTRSIFLGDAIHFEVANHIAGLMIFLTIQDATQNLYFFINSPGGLAVAGLL 85 Query: 90 IYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQ--GQAT 147 IYDTMQ++ P V T+ +G ASM +FLL G KR PN RVMIHQP Y Q+ Sbjct: 86 IYDTMQYVTPPVYTLGLGVLASMASFLLVGGETSKRLMGPNGRVMIHQPESDYTHKDQSL 145 Query: 148 DIEIHAREILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEAVEYGLVDSI 202 ++++ + E+ ++ + + T E + ER+ F++A EA YG+VD I Sbjct: 146 EVQLDSGEVEDIRKMVIRVYLERTRLPREVLNDHLERNYFMTATEAKYYGIVDDI 200 >UniRef50_C5CQN7 ATP-dependent Clp protease proteolytic subunit n=5 Tax=Bacteria RepID=C5CQN7_VARPS Length = 198 Score = 174 bits (442), Expect = 1e-42, Method: Composition-based stats. Identities = 68/174 (39%), Positives = 108/174 (62%) Query: 33 IYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIYD 92 + + K R + + G + D +A + +++ L+A++ +K I + ++SPGG + +G +I+D Sbjct: 20 LEEKAFKSRTLLIFGSITDSVAADVTRRLIALDADSGDKPIDILVSSPGGHLESGDAIHD 79 Query: 93 TMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIH 152 ++FI V+ I G S L A + +R CLPN+R +IHQP GG GQATDI I Sbjct: 80 IVRFISAPVNMIGTGWVGSAATHLYLAVPRERRVCLPNTRFLIHQPSGGAGGQATDIAIQ 139 Query: 153 AREILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEAVEYGLVDSILTHR 206 A+EI+K + R+ +A TG+ ++ + D ERDR+LSA EAVEYGLV I+ + Sbjct: 140 AQEIIKARHRIAHEIARETGKPIDVVLADIERDRWLSAAEAVEYGLVSRIIQRK 193 >UniRef50_B5A4F2 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Gymnochlora stellata RepID=B5A4F2_GYMST Length = 240 Score = 174 bits (441), Expect = 2e-42, Method: Composition-based stats. Identities = 72/180 (40%), Positives = 117/180 (65%) Query: 28 ERSFDIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAG 87 ++ + L K R+IF TG++ D ++N IV +++ + + + I INSPGG I++G Sbjct: 30 YDISEVDTILKKNRIIFCTGEINDLVSNTIVNHLVYFSSLSDKDAIKFIINSPGGNISSG 89 Query: 88 MSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQAT 147 ++IYD + K ++T +G +AS+G FLL G+ +RF PNSR+MIHQP GG QG Sbjct: 90 LAIYDAITISKLTLNTYSIGISASIGCFLLCIGSPNRRFSFPNSRIMIHQPFGGIQGTPI 149 Query: 148 DIEIHAREILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEAVEYGLVDSILTHRN 207 DIEI +E++ + +N L+A HT S+E+IE+DT+ +++ + EA+ YG++D IL +N Sbjct: 150 DIEIQTKELIIQRSNLNYLIACHTNNSIEKIEKDTDFEKYFTPHEALRYGIIDKILIKKN 209 >UniRef50_B0LN89 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Lychnis chalcedonica RepID=B0LN89_LYCCH Length = 222 Score = 174 bits (441), Expect = 2e-42, Method: Composition-based stats. Identities = 62/175 (35%), Positives = 98/175 (56%), Gaps = 1/175 (0%) Query: 29 RSFDIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGM 88 D Y L K R++FL + N I +LFL E+ +K +L+I+S GG+ T M Sbjct: 24 DWLDFYHELHKRRLLFLCQDFNYEIVNQIAGLLLFLHLEDEDKQQHLFIHSRGGLATHAM 83 Query: 89 SIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLG-GYQGQAT 147 +IYDTMQ + V TI MG ASM LL GA KR ++R+M+H P ++G A+ Sbjct: 84 AIYDTMQLVTLGVHTIGMGVVASMATLLLAGGAYTKRNAYAHTRIMLHLPATRPFKGTAS 143 Query: 148 DIEIHAREILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEAVEYGLVDSI 202 ++ ++E+L++ + E++ TG+ + I +D ++ SA EA YG++D I Sbjct: 144 EVLGESKEVLRLTQTLVEILEERTGRPQDLIYKDMQKTTHFSAEEAQAYGIIDEI 198 >UniRef50_C5XH66 ATP-dependent Clp protease proteolytic subunit n=11 Tax=Magnoliophyta RepID=C5XH66_SORBI Length = 291 Score = 173 bits (440), Expect = 3e-42, Method: Composition-based stats. Identities = 80/214 (37%), Positives = 127/214 (59%), Gaps = 9/214 (4%) Query: 2 SYSGERDNFAPHMALVPMVIEQTSRGERSFDIYSRLLKERVIFLTGQVEDHMANLIVAQM 61 + G R +VP + T+ + D+ S L K R+++L + + L++A+ Sbjct: 62 AVDGGRGARDVVAMVVP-FLRGTAWEQPPPDLASFLYKNRIVYLGMCLVPSVTELMLAEF 120 Query: 62 LFLEAENPEKDIYLYINSPG--------GVITAGMSIYDTMQFIKPDVSTICMGQAASMG 113 L+L+ ++ EK IYLYINS G G T +++YD M+++K + T+C+G A Sbjct: 121 LYLQYDDAEKPIYLYINSTGTTKNGEKLGYETEALAVYDAMRYVKVPIFTLCVGNAWGEA 180 Query: 114 AFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREILKVKGRMNELMALHTGQ 173 A LL AGAKG R LP+S +MI QP+G +QGQATD++I +EI VK M +L+A H G+ Sbjct: 181 ALLLAAGAKGNRAALPSSTIMIKQPIGRFQGQATDVDIARKEIRNVKIEMVKLLARHIGK 240 Query: 174 SLEQIERDTERDRFLSAPEAVEYGLVDSILTHRN 207 +E+I RD R ++ S EAV+YG++D ++ + Sbjct: 241 PIEEIARDIRRPKYFSPSEAVDYGIIDKVIYNEK 274 >UniRef50_A9I409 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Bordetella petrii DSM 12804 RepID=A9I409_BORPD Length = 217 Score = 173 bits (439), Expect = 3e-42, Method: Composition-based stats. Identities = 65/180 (36%), Positives = 110/180 (61%), Gaps = 1/180 (0%) Query: 27 GERSFDIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITA 86 G+ S + + + R + + G + D +A+ V ++L L+AE+ + I + ++SPGG + + Sbjct: 33 GQNSAFLEEKTFRTRTVLVFGTITDAVASETVRRLLTLDAES-DAPIDMIVSSPGGHLES 91 Query: 87 GMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQA 146 G +I+D +FI V+ I G S L + +RFCLP +R +IHQP GG G A Sbjct: 92 GDAIHDVARFISAPVNMIGTGWVGSAATHLYLGAPRERRFCLPQTRFLIHQPSGGAGGPA 151 Query: 147 TDIEIHAREILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEAVEYGLVDSILTHR 206 +D+ IHA+EI++ + R+ +++A TGQ +E++ +D ERD ++SA EA+ YGL I+ R Sbjct: 152 SDMAIHAKEIIRARERIAQVIARETGQPIERVRQDIERDLWMSAEEAIAYGLASRIIERR 211 >UniRef50_Q3Z7J8 ATP-dependent Clp protease proteolytic subunit n=24 Tax=root RepID=Q3Z7J8_DEHE1 Length = 242 Score = 173 bits (438), Expect = 4e-42, Method: Composition-based stats. Identities = 44/167 (26%), Positives = 80/167 (47%), Gaps = 4/167 (2%) Query: 39 KERVIFLTGQVEDHM--ANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIYDTMQF 96 +R ++L G++ D + + Q+ E + + +I L+INSPGG + A IY+ + Sbjct: 19 SDRTLYLDGEISDETWFGDEVTPQLFKDELSSGDGNITLWINSPGGDVFAAAQIYNMLMD 78 Query: 97 IKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREI 156 DV+ AAS + + AG K P + +MIH P G +++ + Sbjct: 79 YPHDVTVKIDALAASAASVIAMAGT--KVCMSPVAMMMIHNPATIAIGDTEEMQKAIDML 136 Query: 157 LKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEAVEYGLVDSIL 203 +VK + + +G S +I + + + +++A EAV+ G D IL Sbjct: 137 NEVKESIMNAYEIKSGLSRHKISQLMDAETWMNAKEAVKLGFADEIL 183 >UniRef50_P48254 Putative ATP-dependent Clp protease proteolytic subunit-like n=1 Tax=Cyanophora paradoxa RepID=CLPPL_CYAPA Length = 199 Score = 172 bits (437), Expect = 6e-42, Method: Composition-based stats. Identities = 76/177 (42%), Positives = 106/177 (59%), Gaps = 2/177 (1%) Query: 33 IYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIYD 92 I + LL ERVIFL + ++ + +L+LE+EN +K + YINS +YD Sbjct: 22 INNALLNERVIFLCNYEDATDESIYIGMLLYLESENSQKPVSFYINSSITFPNLCFGLYD 81 Query: 93 TMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPL--GGYQGQATDIE 150 T+ IK D+ TIC+G A M + +L AG KG+RF LPNSR+M+ +PL GG GQATD+ Sbjct: 82 TILQIKADIVTICLGLAGGMSSLILAAGTKGQRFALPNSRIMMQEPLIDGGVNGQATDLA 141 Query: 151 IHAREILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEAVEYGLVDSILTHRN 207 I A+E++ K + L TGQ IE+D +R R+ SA A EYG +DS+L N Sbjct: 142 IEAKELMDTKEILINLYHERTGQPKPVIEKDLQRPRYFSAQAAKEYGFIDSLLMASN 198 >UniRef50_A4RSQ9 ATP-dependent Clp protease proteolytic subunit n=6 Tax=cellular organisms RepID=A4RSQ9_OSTLU Length = 308 Score = 172 bits (435), Expect = 9e-42, Method: Composition-based stats. Identities = 57/178 (32%), Positives = 105/178 (58%), Gaps = 11/178 (6%) Query: 41 RVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPG---------GVITAGMSIY 91 R++++ + + LIV+++L+L+ + +K Y+YINS G G T +I+ Sbjct: 108 RIVYIGMPLVPAVTELIVSELLYLQYTDQKKPCYIYINSTGCTRADGEVVGFETEATAIF 167 Query: 92 DTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQG--QATDI 149 DTM++I ++ T+ G A LL+AG KGKR+ P++ M+HQP G QAT++ Sbjct: 168 DTMKYIGNEIYTVGTGVAIGQACMLLSAGDKGKRYMTPHATAMLHQPRVPSTGERQATEL 227 Query: 150 EIHAREILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEAVEYGLVDSILTHRN 207 I RE L K + ++++ TG S+ ++++D +R +++A +A+EYG+VD ++ + Sbjct: 228 NIKWRETLAQKKSLLDILSQTTGHSVAKLDKDMQRPLYMTAKDAIEYGIVDKVIERES 285 >UniRef50_Q06SH9 ATP-dependent Clp protease proteolytic subunit n=2 Tax=Chlorophyceae RepID=Q06SH9_STIHE Length = 518 Score = 172 bits (435), Expect = 1e-41, Method: Composition-based stats. Identities = 60/194 (30%), Positives = 117/194 (60%), Gaps = 9/194 (4%) Query: 19 MVIEQTSRGERSFDI--YSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKD---I 73 Q + ++ D+ YS+++++ +++ + + +LF+E + ++ + Sbjct: 284 KAYYQDLKDQKIHDLSSYSKVMED--MYIPQNIRQKKSES--EDLLFMETQERLQEQSRV 339 Query: 74 YLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRV 133 +++INS GG +++G++IYD +QF+K T+C+G A S + +L G G R+ + V Sbjct: 340 FVFINSTGGSVSSGITIYDALQFVKTGAVTVCLGMAFSASSMVLAGGNIGHRYVAEGAHV 399 Query: 134 MIHQPLGGYQGQATDIEIHAREILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEA 193 MIHQP GG GQA+D+ + A EIL+++ ++ + +L + ++L ++ +D +RD F++ EA Sbjct: 400 MIHQPEGGITGQASDVLLDAYEILRIRRQVATIYSLCSKRALSEVLKDLDRDNFMTPQEA 459 Query: 194 VEYGLVDSILTHRN 207 V+YGL D I+T N Sbjct: 460 VDYGLADEIVTRYN 473 Score = 40.3 bits (93), Expect = 0.042, Method: Composition-based stats. Identities = 11/64 (17%), Positives = 29/64 (45%), Gaps = 2/64 (3%) Query: 13 HMALVPMVIE--QTSRGERSFDIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPE 70 VP V+ + D+Y + + R++F+ +++ + N I M+++ E+ Sbjct: 1 MPIGVPKVLYYWDDELPLQWVDLYHLIFRRRLVFVMSELDQDLCNQIAGMMVYIHFEDKR 60 Query: 71 KDIY 74 ++ Sbjct: 61 DELE 64 >UniRef50_Q5Z0M5 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Nocardia farcinica RepID=Q5Z0M5_NOCFA Length = 201 Score = 171 bits (434), Expect = 1e-41, Method: Composition-based stats. Identities = 69/172 (40%), Positives = 107/172 (62%) Query: 34 YSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIYDT 93 +LL R++ L G ++D L+ Q+L L AEN E I L+I+SPGG + A ++I D Sbjct: 15 REQLLSRRILVLDGPLDDDNGTLLATQLLTLAAENDEAPISLWIHSPGGSVPAMLAIRDV 74 Query: 94 MQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHA 153 M+ + +VST+ +G A S G FLL+AG++GKRF LP++RV++HQ G G A D+E+ A Sbjct: 75 MRLVPCEVSTLALGLACSAGQFLLSAGSRGKRFALPHARVLMHQGSAGIGGTAVDVEVQA 134 Query: 154 REILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEAVEYGLVDSILTH 205 ++ + L+A TGQ ++I D+ DR+ +A +A EYG +D I+ Sbjct: 135 DDLRHTVETVLGLIAADTGQPYDRIYEDSLHDRWFTAAQAKEYGFIDHIVDS 186 >UniRef50_B4WHH1 ATP-dependent Clp protease proteolytic subunit n=3 Tax=Cyanobacteria RepID=B4WHH1_9SYNE Length = 218 Score = 170 bits (431), Expect = 2e-41, Method: Composition-based stats. Identities = 82/203 (40%), Positives = 125/203 (61%), Gaps = 15/203 (7%) Query: 17 VPMVIEQTSRGERSFDIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLY 76 VP + + R + +I++R+ +ER++FL + D +AN +V+ +L+L++E+ K IYLY Sbjct: 3 VPYNLPGS-RSWQWVNIFTRMSQERILFLNSPLTDGVANSLVSALLYLDSEDQSKPIYLY 61 Query: 77 INSPGG--------------VITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAK 122 INS G I AG+++YDT+ IK +V TICMG A M A LL AGAK Sbjct: 62 INSLGDPVMSGQADESAGMISIRAGLAVYDTIAHIKSEVLTICMGTAYGMAAVLLAAGAK 121 Query: 123 GKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREILKVKGRMNELMALHTGQSLEQIERDT 182 GKR LP++ + + P +GQATDI + A E+L + + +++A TGQS E+I +D Sbjct: 122 GKRAALPHTSIALTHPTTLTRGQATDINLEATEVLAKRKLIQQILANSTGQSAEKIAKDM 181 Query: 183 ERDRFLSAPEAVEYGLVDSILTH 205 ER +LS EA EYGL+D ++ + Sbjct: 182 ERMFYLSPTEAKEYGLIDRVIEN 204 >UniRef50_D1Z6F0 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Sordaria macrospora RepID=D1Z6F0_SORMA Length = 225 Score = 170 bits (430), Expect = 4e-41, Method: Composition-based stats. Identities = 80/213 (37%), Positives = 117/213 (54%), Gaps = 41/213 (19%) Query: 2 SYSGERDNFAPHMAL-VPMVIEQTSRGERSFDIYSRLLKERVIFLTGQVEDHMANLIVAQ 60 + SG P + +P + E TS G R + L G ++D + IVAQ Sbjct: 27 TGSGSGAPLRPMGNIPMPYITEVTSGGW------------RTLCLNGAIDDTTSAAIVAQ 74 Query: 61 MLFLEAENPEKDIYLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAG 120 +L+LE++NP+K I +YINSPGG +++G++IYDTM +IK VST+C+G AASM A LL G Sbjct: 75 LLWLESDNPDKPITMYINSPGGEVSSGLAIYDTMTYIKSPVSTVCVGAAASMAAVLLIGG 134 Query: 121 AKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREILKVKGRMNELMALHTGQS------ 174 GKR+ LP+S VMI +++ ++N+++ H +S Sbjct: 135 EPGKRYALPHSTVMI---------------------QRIREQINKIVQSHINKSFGYEKY 173 Query: 175 -LEQIERDTERDRFLSAPEAVEYGLVDSILTHR 206 L I ERD++L+A EAVE G+VD IL R Sbjct: 174 DLAAISDMMERDKYLTAEEAVELGVVDQILDRR 206 >UniRef50_B3LBC6 ATP-dependent Clp protease proteolytic subunit n=7 Tax=Plasmodium RepID=B3LBC6_PLAKH Length = 1101 Score = 166 bits (420), Expect = 4e-40, Method: Composition-based stats. Identities = 77/199 (38%), Positives = 116/199 (58%), Gaps = 11/199 (5%) Query: 20 VIEQTSRGERSFDIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINS 79 ++ + I S LL +R+IFL+ V H++ I++Q+L+LE E+ K I+LYINS Sbjct: 57 LLSPGEHNQHGISIPSMLLSKRIIFLSSPVYPHISEQIISQLLYLEYESKRKPIHLYINS 116 Query: 80 PGGV----------ITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLP 129 G + IT +SI D +++I DV T C+G+A + L ++G KG RF L Sbjct: 117 TGDLENNKIINLNGITDVISIIDVIEYISSDVYTYCLGKAYGISCILASSGKKGFRFSLK 176 Query: 130 NSRVMIHQ-PLGGYQGQATDIEIHAREILKVKGRMNELMALHTGQSLEQIERDTERDRFL 188 NS ++Q QAT+IEI +EI+ K ++ E++A +TG+ IE+ ERDR+ Sbjct: 177 NSSFCLNQSYSVIPFNQATNIEIQNKEIMNTKRKVVEIIANNTGKDKSHIEQILERDRYF 236 Query: 189 SAPEAVEYGLVDSILTHRN 207 SAPEAVE+ LVD IL + Sbjct: 237 SAPEAVEFNLVDHILEKED 255 >UniRef50_Q3LW65 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Bigelowiella natans RepID=Q3LW65_BIGNA Length = 207 Score = 165 bits (419), Expect = 7e-40, Method: Composition-based stats. Identities = 71/168 (42%), Positives = 109/168 (64%) Query: 36 RLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIYDTMQ 95 + ++ L G V+D++A+LI + LF ++ + K++ L INSPGG +TAG+ I D + Sbjct: 39 KFNNNTILSLYGGVDDNIADLIFKKALFTKSVDNNKELTLLINSPGGSVTAGLKIMDALN 98 Query: 96 FIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHARE 155 ++K +T+C+ AASMGAFLL +G++ R L NSR+MIHQPLGG G + +EI A E Sbjct: 99 YVKVRNNTVCLALAASMGAFLLASGSRNYRQALLNSRIMIHQPLGGAFGDSLGVEIQANE 158 Query: 156 ILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEAVEYGLVDSIL 203 IL K ++ ++ + L +I DT+RD F+S+ +A YGL+D IL Sbjct: 159 ILYFKLVLSGYLSDFCRKPLNEILVDTDRDYFMSSKQATNYGLIDKIL 206 >UniRef50_B0LP79 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Oenothera fruticosa RepID=B0LP79_OENFR Length = 295 Score = 165 bits (419), Expect = 7e-40, Method: Composition-based stats. Identities = 66/193 (34%), Positives = 108/193 (55%), Gaps = 2/193 (1%) Query: 15 ALVPMVIEQTSRGERSFDIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIY 74 P + + D+++ L ++R++FL +++ + N IV M++L +NP D+ Sbjct: 6 PSAPFKMTGDKK-ASWLDLFNILYRKRILFLGQEIDVELGNHIVGLMVYLGIDNPFLDMI 64 Query: 75 LYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVM 134 +INSPGG+ G IYD MQ+IKP+V TI +G ASM + +L+ G KGKR N R+M Sbjct: 65 FFINSPGGLAIPGFGIYDIMQYIKPNVYTIGLGVVASMASLILSGGGKGKRIGGKNMRIM 124 Query: 135 IHQPLGGYQGQA-TDIEIHAREILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEA 193 IHQP Y+ I A + ++ ++ + TG+ I + ER+ F+++ EA Sbjct: 125 IHQPAMSYRKDPLRTILREAEGMSCLRTQVLKCYIKKTGKDCGVINKLLERNTFMTSTEA 184 Query: 194 VEYGLVDSILTHR 206 + +G+VDSI R Sbjct: 185 LGFGIVDSIADGR 197 >UniRef50_B9HMY7 ATP-dependent Clp protease proteolytic subunit n=7 Tax=Spermatophyta RepID=B9HMY7_POPTR Length = 391 Score = 164 bits (416), Expect = 1e-39, Method: Composition-based stats. Identities = 65/192 (33%), Positives = 100/192 (52%), Gaps = 10/192 (5%) Query: 26 RGERSFDIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPG---- 81 D+ S LL R+ +L + + L+VAQ ++L+ E+P K IYLYINS G Sbjct: 167 PESAPPDLPSLLLDARICYLGMPIVPAVTELLVAQFMYLDYEDPSKPIYLYINSSGTQNE 226 Query: 82 -----GVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIH 136 G T +I D M + K + T+ G A A LL+ GAKG R PNS ++ Sbjct: 227 KMETVGSETEAYAIADIMSYCKSTIYTVNCGMAYGQAAMLLSLGAKGYRALQPNSSTKLY 286 Query: 137 QP-LGGYQGQATDIEIHAREILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEAVE 195 P + G A D+ I A+E+ EL+A TG+ E++ +D +R ++L A EA++ Sbjct: 287 LPKVNRSSGAAVDMWIKAKELDANTEYYIELLAKGTGKPKEELVKDIQRPKYLKAQEAID 346 Query: 196 YGLVDSILTHRN 207 YG+ D +L+ + Sbjct: 347 YGIADKLLSSND 358 >UniRef50_A4S2U0 ATP-dependent Clp protease proteolytic subunit n=2 Tax=Mamiellales RepID=A4S2U0_OSTLU Length = 210 Score = 164 bits (416), Expect = 1e-39, Method: Composition-based stats. Identities = 56/197 (28%), Positives = 110/197 (55%), Gaps = 2/197 (1%) Query: 5 GERDNFAPHMALVPMVIEQTSRGERSFDIYSRLLKERVIFLTGQVEDHMANLIVAQMLFL 64 VP+++ G D++ L ++R++FL ++++ +A A++L L Sbjct: 14 APPGAITSGPETVPVMVPDGRGGGE--DVFGALARDRIVFLGTRIDEQVAAETCARLLQL 71 Query: 65 EAENPEKDIYLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGK 124 E+E+PE +I +++N G +I DTM+++ VST+ +G A L+ AG KGK Sbjct: 72 ESEDPEGEIRVWVNCVAGTQYCVTAILDTMEYVSCPVSTVALGCVAGPPVMLVAAGDKGK 131 Query: 125 RFCLPNSRVMIHQPLGGYQGQATDIEIHAREILKVKGRMNELMALHTGQSLEQIERDTER 184 R+ + ++R+++ QPLGG G + +++I A E+ + +A +TG+ +++E R Sbjct: 132 RYGMSSARIVLSQPLGGLAGTSIEVKIQATELNRNAKAQVGFIAKYTGRDADELEAMMAR 191 Query: 185 DRFLSAPEAVEYGLVDS 201 D ++ EA+++GL+D Sbjct: 192 DTYMGVDEAIDFGLIDH 208 >UniRef50_B5YV95 ATP-dependent Clp protease proteolytic subunit n=136 Tax=root RepID=B5YV95_ECO5E Length = 1156 Score = 164 bits (416), Expect = 1e-39, Method: Composition-based stats. Identities = 44/205 (21%), Positives = 94/205 (45%), Gaps = 8/205 (3%) Query: 1 MSYSGERDNFAPHMA-LVPMVIEQTSRGERSFDIYSRLLKERVIFLTGQVEDH--MANLI 57 ++ S ++ P + + + + + + F + + + I++ ++ A Sbjct: 473 LTPSTTKEATVPELNDSISATPKASMKNKSWFRMQAGGPGDADIYIYDEIGFWGVTAKQF 532 Query: 58 VAQMLFLEAENPEKDIYLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLL 117 V+++ L I L+INSPGG + G++I++ ++ ++ G AASM + + Sbjct: 533 VSELNAL---GDITHINLHINSPGGDVFEGIAIFNALKNQGATITVYVDGVAASMASVIA 589 Query: 118 TAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREILKVKGRMNELMALHTGQSLEQ 177 AG N+ +MIH+P G G A D+ +A + KV+ + A TG++ ++ Sbjct: 590 MAG--DTVIMPENAFMMIHKPWGFSGGDAEDMRSYADLLDKVESVLLPAYAQKTGKTTDE 647 Query: 178 IERDTERDRFLSAPEAVEYGLVDSI 202 I + ++S E + +G D + Sbjct: 648 IAAMLADETWMSGAECLAHGFADQV 672 >UniRef50_UPI000196C506 hypothetical protein CATMIT_02666 n=1 Tax=Catenibacterium mitsuokai DSM 15897 RepID=UPI000196C506 Length = 178 Score = 164 bits (416), Expect = 2e-39, Method: Composition-based stats. Identities = 72/171 (42%), Positives = 106/171 (61%), Gaps = 1/171 (0%) Query: 32 DIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIY 91 D S RVI++T ++ D +A I QM L A + +DI L+I SPGG +TAG++I Sbjct: 4 DCISEEFSRRVIYITDEITDSLAADICCQMNHLAAVS-NEDITLWIMSPGGSVTAGLAIL 62 Query: 92 DTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEI 151 DTM ++ D+ TI MGQAASM A + ++G KGKR+ N+ +MIHQ L G+ GQ TDI Sbjct: 63 DTMNSVECDIKTIVMGQAASMAAVIASSGTKGKRYIGTNAWMMIHQALAGFSGQTTDILR 122 Query: 152 HAREILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEAVEYGLVDSI 202 A+ I ++ + ++A + +E I +D +RD ++A A+ YGLVD I Sbjct: 123 SAQHIEEINNNLYSILARNCSAHIETIAKDCDRDYHMNARTAIVYGLVDHI 173 >UniRef50_Q9XJ35 ATP-dependent Clp protease proteolytic subunit-related protein 1, chloroplastic n=4 Tax=Embryophyta RepID=CLPR1_ARATH Length = 387 Score = 164 bits (415), Expect = 2e-39, Method: Composition-based stats. Identities = 69/188 (36%), Positives = 100/188 (53%), Gaps = 10/188 (5%) Query: 30 SFDIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPG-------- 81 D+ S LL R+ +L + + L+VAQ ++L+ +NP K IYLYINSPG Sbjct: 169 PPDLPSLLLDARICYLGMPIVPAVTELLVAQFMWLDYDNPTKPIYLYINSPGTQNEKMET 228 Query: 82 -GVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQP-L 139 G T +I DT+ + K DV TI G A A LL+ G KG R P+S ++ P + Sbjct: 229 VGSETEAYAIADTISYCKSDVYTINCGMAFGQAAMLLSLGKKGYRAVQPHSSTKLYLPKV 288 Query: 140 GGYQGQATDIEIHAREILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEAVEYGLV 199 G A D+ I A+E+ EL+A TG+S EQI D +R ++L A A++YG+ Sbjct: 289 NRSSGAAIDMWIKAKELDANTEYYIELLAKGTGKSKEQINEDIKRPKYLQAQAAIDYGIA 348 Query: 200 DSILTHRN 207 D I ++ Sbjct: 349 DKIADSQD 356 >UniRef50_A4E7Q8 ATP-dependent Clp protease proteolytic subunit n=2 Tax=Collinsella RepID=A4E7Q8_9ACTN Length = 205 Score = 163 bits (413), Expect = 3e-39, Method: Composition-based stats. Identities = 56/197 (28%), Positives = 108/197 (54%), Gaps = 4/197 (2%) Query: 13 HMALVPMVIEQTSRGERSFDIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKD 72 + P+ + +++RG IY +L R + + G +E MA+ + Q+ L+A +P + Sbjct: 6 SPIISPLTMRESARGITLTSIYDEMLARRELSVMGNIETPMAHDLCQQIRLLDATDPSRP 65 Query: 73 IYLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSR 132 I +++ S GG + +G++IYD M+ + T+C+ AASMGA + G + P++ Sbjct: 66 ITIFVASAGGSVRSGLAIYDAMRLASCPIRTVCLEFAASMGAVIFMGGDDCR--MAPHAE 123 Query: 133 VMIHQPLG--GYQGQATDIEIHAREILKVKGRMNELMALHTGQSLEQIERDTERDRFLSA 190 +MIH PL G G A ++ +R +++ + + ++++ +G + ++I+ T +D +LSA Sbjct: 124 LMIHDPLIPQGAGGSALALQETSRRLMQTRKTLTQILSDRSGLTPKRIQSLTAKDTYLSA 183 Query: 191 PEAVEYGLVDSILTHRN 207 AVE G IL+ Sbjct: 184 ERAVELGFAHEILSTTK 200 >UniRef50_Q872F9 ATP-dependent Clp protease proteolytic subunit n=3 Tax=Sordariales RepID=Q872F9_NEUCR Length = 158 Score = 161 bits (408), Expect = 1e-38, Method: Composition-based stats. Identities = 69/139 (49%), Positives = 98/139 (70%), Gaps = 7/139 (5%) Query: 75 LYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVM 134 +YINSPGG +++G++IYDTM +IK VST+C+G AASM A LL G GKR+ LP+S VM Sbjct: 1 MYINSPGGEVSSGLAIYDTMTYIKSPVSTVCVGAAASMAAVLLIGGEPGKRYVLPHSTVM 60 Query: 135 IHQPLGGYQGQATDIEIHAREILKVKGRMNELMALHTGQ-------SLEQIERDTERDRF 187 +HQPLGG +GQA+DI I+A +I +++ ++N+++ H + L I ERD++ Sbjct: 61 VHQPLGGTRGQASDILIYANQIQRIREQINKIVQSHVNKAFGYEKYDLAAISDMMERDKY 120 Query: 188 LSAPEAVEYGLVDSILTHR 206 L+A EAVE G+VD IL R Sbjct: 121 LTAEEAVELGVVDQILDRR 139 >UniRef50_B2X1V4 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Oedogonium cardiacum RepID=B2X1V4_OEDCA Length = 560 Score = 161 bits (407), Expect = 2e-38, Method: Composition-based stats. Identities = 60/187 (32%), Positives = 103/187 (55%), Gaps = 2/187 (1%) Query: 21 IEQTSRGERSFDIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSP 80 + + +LK I + + +LI A+ E +K ++++INS Sbjct: 331 LFGRPYTYLKAGLDINMLKTSTILEKKRKREEAEDLIFAE--SQERMQEQKRVFVFINST 388 Query: 81 GGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLG 140 GG + +G+++YD +QF+K T+C+G A S + +L G G R+ VMIHQP G Sbjct: 389 GGSVHSGITVYDALQFVKAGTVTVCLGTAFSASSLVLAGGNIGHRYVSEGGHVMIHQPEG 448 Query: 141 GYQGQATDIEIHAREILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEAVEYGLVD 200 G QGQA+D+ + E+++V+ + + AL + +S +I +D +RD F++ EA++YGL D Sbjct: 449 GIQGQASDVVVDTHELMRVRRQAATIYALCSKRSFHEILKDLDRDYFMTPQEAIDYGLAD 508 Query: 201 SILTHRN 207 I+T N Sbjct: 509 EIVTRYN 515 Score = 43.4 bits (101), Expect = 0.005, Method: Composition-based stats. Identities = 13/60 (21%), Positives = 30/60 (50%), Gaps = 2/60 (3%) Query: 17 VPMVIE--QTSRGERSFDIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIY 74 VP V+ + D+Y + + R+IF+ +++ + N I M+++ E+ K++ Sbjct: 5 VPKVLYYWDDELPLQWIDLYHLIFRRRLIFVMSELDQELCNQIAGMMIYIHFEDKRKELE 64 >UniRef50_C7Z253 ATP-dependent Clp protease proteolytic subunit n=3 Tax=Fungi/Metazoa group RepID=C7Z253_NECH7 Length = 157 Score = 160 bits (406), Expect = 2e-38, Method: Composition-based stats. Identities = 73/139 (52%), Positives = 99/139 (71%), Gaps = 7/139 (5%) Query: 75 LYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVM 134 +YINSPGG +T+GM+IYDTM +IK VST+C+G AASM A LL G GKRF LP+S +M Sbjct: 1 MYINSPGGSVTSGMAIYDTMSYIKSPVSTVCVGGAASMAAILLAGGEAGKRFSLPHSSIM 60 Query: 135 IHQPLGGYQGQATDIEIHAREILKVKGRMNELMALHTGQ-------SLEQIERDTERDRF 187 IHQPLGG +GQA+DI I+A +I K++ + N +M H + ++E+I ERD++ Sbjct: 61 IHQPLGGTRGQASDILIYANQIQKIREQSNHIMQYHLNKAKGHDKYTIEEINDLMERDKY 120 Query: 188 LSAPEAVEYGLVDSILTHR 206 LS EA+E G++D ILT R Sbjct: 121 LSPDEALELGVIDEILTKR 139 >UniRef50_Q2WGG1 ATP-dependent Clp protease proteolytic subunit (Fragment) n=2 Tax=Tracheophyta RepID=Q2WGG1_SELUN Length = 206 Score = 160 bits (404), Expect = 3e-38, Method: Composition-based stats. Identities = 75/192 (39%), Positives = 109/192 (56%), Gaps = 3/192 (1%) Query: 17 VPMVIEQTSRGER--SFDIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIY 74 VP V + S E D ++R +ER+ ++D AN + EN +D + Sbjct: 5 VPKVSFRISGEEDMVRIDTHNRPYRERLPSSGQHMDDETANQPIRITTHPNGENRSQDTH 64 Query: 75 LYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVM 134 Y N PGG ++AG+S+YDTMQ PDV TI +G AASMG + T G +R LP++RVM Sbjct: 65 SYTNPPGGAVSAGISVYDTMQSAVPDVHTIRVGLAASMGPSISTGGEITRRMALPHARVM 124 Query: 135 IHQP-LGGYQGQATDIEIHAREILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEA 193 IHQP Y+GQA + + A EILK++ + ++ A TG+ L + +D ERD F A EA Sbjct: 125 IHQPASSFYEGQAGERLMEAEEILKLRDCITKIHARKTGKPLWVVSKDMERDVFTPAREA 184 Query: 194 VEYGLVDSILTH 205 +G+ D ++T Sbjct: 185 RVHGITDPVVTE 196 >UniRef50_A7FWE0 ATP-dependent Clp protease proteolytic subunit n=4 Tax=cellular organisms RepID=A7FWE0_CLOB1 Length = 252 Score = 159 bits (403), Expect = 4e-38, Method: Composition-based stats. Identities = 43/188 (22%), Positives = 85/188 (45%), Gaps = 10/188 (5%) Query: 27 GERSFDIYSRLLKERVI--FLTGQV----EDHMANLIVAQMLFLEAENPEKDIYLYINSP 80 ++ +++ + E + ++ G + D + L++ + +YINSP Sbjct: 3 NKKFWEVKNSTENENIGEAYIYGDIVSYKWDDTDTTAKSFKEDLDSLGDIDTLNIYINSP 62 Query: 81 GGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLG 140 GG + G +IY+ ++ K ++ G AAS+ + + AG F NS +MIH P Sbjct: 63 GGSVFQGQAIYNIIKRHKAKINIHVDGVAASIASVIAMAG--NTIFMPKNSMMMIHNPWT 120 Query: 141 GYQGQATDIEIHAREILKVKGRMNELMALHTG--QSLEQIERDTERDRFLSAPEAVEYGL 198 G A ++ A ++ K++ + E G S E + + + +L+A E +YGL Sbjct: 121 FAYGNAKELRKQADDLDKIRESLIEAYLSKAGDKLSRETLIGIMDNETWLTAQECYDYGL 180 Query: 199 VDSILTHR 206 D ++ + Sbjct: 181 CDELVEEK 188 >UniRef50_A0JQM5 ATP-dependent Clp protease proteolytic subunit n=2 Tax=Lactobacillus RepID=A0JQM5_LACS1 Length = 249 Score = 159 bits (403), Expect = 5e-38, Method: Composition-based stats. Identities = 48/196 (24%), Positives = 87/196 (44%), Gaps = 9/196 (4%) Query: 19 MVIEQTSRGERSFDIYSRLLKER-VIFLTGQV--EDHMANLIVAQMLF--LEAENPEKDI 73 MV+E + + S+ I + G++ E I A L+ K I Sbjct: 1 MVMESKLKKPIKYWKMSKTQDNIGEISIYGEIVSEKWFDEEISATSFKDDLDDLGDVKTI 60 Query: 74 YLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRV 133 L+INSPGG + G++I++ ++ K ++ G AAS+ + + +G F NS + Sbjct: 61 NLHINSPGGSVFEGIAIHNMLKMNKAKINVYVDGLAASIASVIAMSG--DTIFMPENSML 118 Query: 134 MIHQPLGGYQGQATDIEIHAREILKVKGRMNELMALHTG--QSLEQIERDTERDRFLSAP 191 MIH P G + ++ A ++ ++ + + E + + + + +LSA Sbjct: 119 MIHNPWTVAMGNSKELRKQADDLDRIAQASVKTYLSKSNGKIDEETLVKLLDEETWLSAQ 178 Query: 192 EAVEYGLVDSILTHRN 207 EAV+YGL D +L Sbjct: 179 EAVDYGLADEVLESNK 194 >UniRef50_C4KQ21 ATP-dependent Clp protease proteolytic subunit n=12 Tax=Burkholderia RepID=C4KQ21_BURPS Length = 366 Score = 159 bits (402), Expect = 6e-38, Method: Composition-based stats. Identities = 42/184 (22%), Positives = 76/184 (41%), Gaps = 10/184 (5%) Query: 25 SRGERSFDIYSRL------LKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYIN 78 R + +DI ++ + E I+ A V+Q+ + A+ I + IN Sbjct: 2 KRNRKWWDIRAQAQAGGGKVAEIRIYSDIGFWGTDAQNFVSQLDAVAADASS--ITVAIN 59 Query: 79 SPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQP 138 S GG + +IY+ ++ V G AAS + +L A + N+ +MIH P Sbjct: 60 SMGGDVFDAFAIYNALRRYAGKVKGRVDGIAASAASLVLMAC--DEIEMPENALLMIHHP 117 Query: 139 LGGYQGQATDIEIHAREILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEAVEYGL 198 G++ D+ A + + A +G S + + + + +L+A +A E G Sbjct: 118 HTVAAGESKDLRRVAELLDNASAGILAAYARRSGLSEDDVRAMMDAETWLTAAQAKEKGF 177 Query: 199 VDSI 202 D I Sbjct: 178 CDVI 181 >UniRef50_C5YWZ8 ATP-dependent Clp protease proteolytic subunit n=5 Tax=Poaceae RepID=C5YWZ8_SORBI Length = 388 Score = 159 bits (402), Expect = 6e-38, Method: Composition-based stats. Identities = 65/184 (35%), Positives = 92/184 (50%), Gaps = 10/184 (5%) Query: 30 SFDIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGG------- 82 + D+ S LL R+IFL + + LI AQ L+L+ ++ K IYLYINS G Sbjct: 162 APDLPSLLLDSRIIFLGMPIVPAVTELIAAQFLWLDYDDRTKPIYLYINSTGTMDENNEL 221 Query: 83 --VITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLG 140 T +I D + K V TI + A A LL+ G KGKR LPNS +H P Sbjct: 222 VASETDAYAIADFINRSKSKVYTINLSMAYGQAAMLLSLGVKGKRGVLPNSITKLHLPKV 281 Query: 141 -GYQGQATDIEIHAREILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEAVEYGLV 199 G A D+ I A+E+ EL++ G+ E++ + R+ A EA++YGL Sbjct: 282 HKSGGAAIDMWIKAKELDTNTDYYLELLSKGVGKPKEELAEFLKGPRYFRAQEAIDYGLA 341 Query: 200 DSIL 203 D+IL Sbjct: 342 DTIL 345 >UniRef50_B5R8Q7 ATP-dependent Clp protease proteolytic subunit n=25 Tax=root RepID=B5R8Q7_SALG2 Length = 709 Score = 158 bits (400), Expect = 9e-38, Method: Composition-based stats. Identities = 44/196 (22%), Positives = 83/196 (42%), Gaps = 11/196 (5%) Query: 18 PMVIEQTSRGE----RSFDIYSRLLKERVIFLTGQVEDH--MANLIVAQMLFLEAENPEK 71 P++ RGE + I + + + ++ A ++ L N Sbjct: 28 PVMTAGNGRGEGSSNSWYSIRAAANNTAEVRIYDEIGGWGISARWFAEELAALGQINR-- 85 Query: 72 DIYLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNS 131 I L+I+SPGG + G++IY+ ++ + G A SM + + G N+ Sbjct: 86 -INLHIHSPGGAVLDGIAIYNLLKNHPAQKTVYIDGMACSMASAIAMVGNP--IIMPENA 142 Query: 132 RVMIHQPLGGYQGQATDIEIHAREILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAP 191 +MIH+P G G+A DI +A + K++ + + TG++ E I ++ ++S Sbjct: 143 MMMIHKPRGVAGGEAEDIREYADLLDKIESVIIPIYTEKTGKTPEDIAAMLAKETWMSGA 202 Query: 192 EAVEYGLVDSILTHRN 207 E V G D ++ Sbjct: 203 ECVSEGFADKLIQPVK 218 >UniRef50_Q65ES6 ATP-dependent Clp protease proteolytic subunit n=2 Tax=Bacillus licheniformis ATCC 14580 RepID=Q65ES6_BACLD Length = 243 Score = 158 bits (400), Expect = 1e-37, Method: Composition-based stats. Identities = 43/190 (22%), Positives = 81/190 (42%), Gaps = 7/190 (3%) Query: 23 QTSRGERSFDIYSRLLKERVIFLTGQVEDH---MANLIVAQMLFLEAENPEKDIYLYINS 79 + + + +++ I L G + + A L++ I LYINS Sbjct: 4 EQKKKNKYWNMKVLNDSTAEITLYGSITGEGWFSESSSKAFQAELKSLGDVSSIDLYINS 63 Query: 80 PGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPL 139 PGG + G +I+ +Q K ++ A S+ + + AG K N+ +MIH P Sbjct: 64 PGGDVFEGQAIHSMLQRHKAKINVYVDALAGSIASVIAMAG--DKITMPSNAMMMIHNPY 121 Query: 140 GGYQGQATDIEIHAREILKVKGRMNELMALHTGQSLEQ--IERDTERDRFLSAPEAVEYG 197 G G A + A ++ K+ + G L+ + + + + +L+A EA+ YG Sbjct: 122 MGMVGNAAEFRKAADDLDKITESIVSTYLAKAGDKLDDGTLRQLLDEETWLTADEALNYG 181 Query: 198 LVDSILTHRN 207 L+D + ++ Sbjct: 182 LIDEVSESKD 191 >UniRef50_B1X3L4 ATP-dependent Clp protease proteolytic subunit n=2 Tax=Paulinella chromatophora RepID=B1X3L4_PAUCH Length = 193 Score = 158 bits (399), Expect = 1e-37, Method: Composition-based stats. Identities = 75/166 (45%), Positives = 111/166 (66%), Gaps = 1/166 (0%) Query: 40 ERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIYDTMQFIKP 99 +R +F+ G ++D MAN +VA +L++ A + + I + I+S GG IT+ +IYDT+ +I Sbjct: 2 QRTLFVAGDIDDTMANDLVAALLYMNAVSTKIPICINIDSRGGSITSAFTIYDTINYISA 61 Query: 100 DVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGY-QGQATDIEIHAREILK 158 V T+C+ A SM FLL AG KG+RF LPNSR+++ QP+G QA+D+ I E+ Sbjct: 62 PVKTVCLSVAESMAVFLLAAGEKGQRFALPNSRIIMEQPIGNVDYRQASDLLIETIEMGF 121 Query: 159 VKGRMNELMALHTGQSLEQIERDTERDRFLSAPEAVEYGLVDSILT 204 K R+NE MA TGQ + +IE+DT R +SA E+V+YGL+D +LT Sbjct: 122 TKRRINECMAEMTGQPMTKIEQDTSRRYHMSAAESVKYGLIDHVLT 167 >UniRef50_Q2VPX8 ATP-dependent Clp protease proteolytic subunit (Fragment) n=1 Tax=Bifidobacterium pullorum RepID=Q2VPX8_9BIFI Length = 139 Score = 158 bits (399), Expect = 2e-37, Method: Composition-based stats. Identities = 70/131 (53%), Positives = 96/131 (73%) Query: 77 INSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIH 136 INSPGG ITAGM+IYDTMQ I+PDV+T+ +G ASMG FLL++GAKGKR+ ++RV++H Sbjct: 1 INSPGGSITAGMAIYDTMQLIEPDVATVGLGMCASMGQFLLSSGAKGKRYLTSHARVLMH 60 Query: 137 QPLGGYQGQATDIEIHAREILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEAVEY 196 QP GG G TD+ I+A I+ +K + EL A TG ++E+I RD E D + +A +A+EY Sbjct: 61 QPSGGIGGTTTDVRINAELIMDMKRTLAELTAEQTGHTVEEIYRDNEYDHWFTAQQALEY 120 Query: 197 GLVDSILTHRN 207 G VD I+T + Sbjct: 121 GFVDKIVTTPD 131 >UniRef50_UPI0000DB7F4F PREDICTED: similar to Putative ATP-dependent Clp protease proteolytic subunit, mitochondrial precursor (Endopeptidase Clp), partial n=1 Tax=Apis mellifera RepID=UPI0000DB7F4F Length = 222 Score = 157 bits (397), Expect = 2e-37, Method: Composition-based stats. Identities = 80/117 (68%), Positives = 100/117 (85%) Query: 16 LVPMVIEQTSRGERSFDIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYL 75 LVPMV+EQTSRGER+FDIYSRLLKER+IFLTG V D +A+LI AQ+L+LE+ NP+K+I Sbjct: 106 LVPMVVEQTSRGERAFDIYSRLLKERIIFLTGPVYDQVASLISAQLLYLESVNPKKEISF 165 Query: 76 YINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSR 132 YINSPGGV++AG++IYDTMQ+I+ VST+C+GQAASMG+ LL G RF LPN+R Sbjct: 166 YINSPGGVVSAGLAIYDTMQYIRCPVSTVCIGQAASMGSLLLCGGEPNNRFALPNAR 222 >UniRef50_C3WMS7 ATP-dependent Clp protease proteolytic subunit n=2 Tax=Fusobacteriaceae RepID=C3WMS7_9FUSO Length = 358 Score = 157 bits (397), Expect = 2e-37, Method: Composition-based stats. Identities = 41/161 (25%), Positives = 77/161 (47%), Gaps = 5/161 (3%) Query: 46 TGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIYDTMQFIKPDVSTIC 105 + + D + + + + + ++I ++INSPGG + A ++I +T++ K V+ Sbjct: 27 SDEYWDDVCDKTIKE--EIGNLGDVENINVHINSPGGSVFAAVAIANTLKNHKAKVTAFI 84 Query: 106 MGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREILKVKGRMNE 165 G AAS + +A N+ MIH PL G ++E + KVK + E Sbjct: 85 DGLAASAATIITSAC--DVVKMPKNAMFMIHNPLTWAYGNKQELEKTGILLDKVKDSILE 142 Query: 166 LM-ALHTGQSLEQIERDTERDRFLSAPEAVEYGLVDSILTH 205 A G++ E++ + +++ +A EA EYG +D I+ Sbjct: 143 TYLAKAKGKTKEELSALMDEEKWFNAEEAKEYGFIDEIVDE 183 >UniRef50_Q011H7 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Ostreococcus tauri RepID=Q011H7_OSTTA Length = 174 Score = 157 bits (397), Expect = 2e-37, Method: Composition-based stats. Identities = 53/170 (31%), Positives = 103/170 (60%) Query: 32 DIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIY 91 D++ L ER++FL ++++++A A++L LEAE+PE +I +++N G +I Sbjct: 3 DVFGALASERIVFLGQRIDENVALDACARLLALEAEDPEGEIRIWVNCVAGTQYCVTAIL 62 Query: 92 DTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEI 151 D M+++ +ST+ +G A L+ AG KGKR+ ++R+++ QPLGG G + +++I Sbjct: 63 DMMEYVSCPISTVALGCVAGPPVMLVAAGDKGKRYGTQSARMVLSQPLGGLAGTSIEVKI 122 Query: 152 HAREILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEAVEYGLVDS 201 A+E+ + +A +TG+ +++E RD ++ EA+++GL+D Sbjct: 123 QAKELNRNAKAQVGFIARYTGKDADELEAMMARDTYMGVQEAIDFGLLDH 172 >UniRef50_B0TCT9 ATP-dependent Clp protease proteolytic subunit n=9 Tax=Firmicutes RepID=B0TCT9_HELMI Length = 254 Score = 156 bits (395), Expect = 4e-37, Method: Composition-based stats. Identities = 52/200 (26%), Positives = 85/200 (42%), Gaps = 12/200 (6%) Query: 6 ERDNFAPHMALVPMVIEQTSRGERSFDIYSRLLKERVIFLTGQV--EDHMANLIVAQMLF 63 ++ P L P R ++ R ++L G + E + + + + Sbjct: 10 SKNPQNPQRGLGPA--------SRWWNWVQNEDGSRTLYLDGPIAEESWLGDEVTPKQFK 61 Query: 64 LEAENPEKDIYLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKG 123 E + E DI ++INSPGG + A IY+ + K V+ G AAS + + AG G Sbjct: 62 SELLSGEGDITIWINSPGGDVFAASQIYNMLMDYKGKVTVKIDGIAASAASVIAMAG--G 119 Query: 124 KRFCLPNSRVMIHQPLGGYQGQATDIEIHAREILKVKGRMNELMALHTGQSLEQIERDTE 183 P S +MIH P G ++E + ++K + L TG S +I + Sbjct: 120 DVLMSPVSMIMIHNPATIAIGDTEEMEKAIAMLEEIKESIINAYELKTGLSRAKISHLMD 179 Query: 184 RDRFLSAPEAVEYGLVDSIL 203 + + +A +AVE G D IL Sbjct: 180 AESWFNARKAVELGFADGIL 199 >UniRef50_A8IXD6 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Chlamydomonas reinhardtii RepID=A8IXD6_CHLRE Length = 276 Score = 156 bits (394), Expect = 5e-37, Method: Composition-based stats. Identities = 63/189 (33%), Positives = 104/189 (55%), Gaps = 12/189 (6%) Query: 29 RSFDIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPG------- 81 D+ +RL ER+++L ++ +A L+ AQ+ L E P+ I+ YINS G Sbjct: 41 PPPDLATRLFSERIMYLGMPIDSSVAELLTAQLFVLVQEAPD-PIFFYINSTGIAKSTTK 99 Query: 82 -GVITAGMSIYDTMQFIK--PDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQP 138 G +++Y M+ ++ + T+C+G A A LL+AG+ GKR L +S +M+ QP Sbjct: 100 FGNEHEAIAVYSMMKGVQKYCPIYTLCVGNAFGEAALLLSAGSPGKRAALRSSTIMLRQP 159 Query: 139 LGGYQG-QATDIEIHAREILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEAVEYG 197 L G QA+DI+I+ + + M + +A T ++ EQI D R R+ + EAV YG Sbjct: 160 LQRLGGMQASDIDIYRKITREKTATMAKYLAACTKKTEEQIMTDFTRPRYFNPYEAVSYG 219 Query: 198 LVDSILTHR 206 L+D++L + Sbjct: 220 LIDTVLEPK 228 >UniRef50_B7C8Y7 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7C8Y7_9FIRM Length = 181 Score = 156 bits (394), Expect = 5e-37, Method: Composition-based stats. Identities = 60/164 (36%), Positives = 100/164 (60%), Gaps = 1/164 (0%) Query: 41 RVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIYDTMQFIKPD 100 R+I L G+V M+ +V ++ L A+N + I + I+SPGG + GM I D M+ I+ Sbjct: 19 RIINLWGEVTPEMSLYVVTRLQELNAKNHD-PITIQIHSPGGSLRDGMIIIDMMEAIQSP 77 Query: 101 VSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREILKVK 160 V T+ +G A SM + +L AG KG R L +S +M+HQ +G+ +DI+ A+ +++ + Sbjct: 78 VYTMALGNAMSMASLILAAGEKGHRKALKHSTIMVHQGSTICEGKFSDIKSGAKRMVETE 137 Query: 161 GRMNELMALHTGQSLEQIERDTERDRFLSAPEAVEYGLVDSILT 204 + EL +TG++ +I D + D FLS+ +AVEYGL+D ++ Sbjct: 138 EMIEELYVKYTGKTKRKIHADLQMDLFLSSDKAVEYGLIDEVVE 181 >UniRef50_A4S2Q5 ATP-dependent Clp protease proteolytic subunit n=4 Tax=Mamiellales RepID=A4S2Q5_OSTLU Length = 381 Score = 155 bits (391), Expect = 1e-36, Method: Composition-based stats. Identities = 53/186 (28%), Positives = 97/186 (52%), Gaps = 10/186 (5%) Query: 30 SFDIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPG-------- 81 D+ S LL R+ ++ + + L+VA++L+L E EK Y+YINS G Sbjct: 147 PPDLPSLLLNARICYIGMSLVPAVTELVVAELLYLGYEQAEKPCYVYINSGGSLNEKGEV 206 Query: 82 -GVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQP-L 139 G+ +I DTM++I+P + T+ +G+ + +L AG KG R LP+ ++ P L Sbjct: 207 VGMDNEAYAILDTMRYIRPKIHTVAVGKCHGNASLILAAGDKGCRHALPHVQISTQPPKL 266 Query: 140 GGYQGQATDIEIHAREILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEAVEYGLV 199 +++I A E + M+ +G+ ++ + +D +R R+ + +A+EYGL+ Sbjct: 267 NRTFDSTQNVQIRANECALYEDTYMGFMSEFSGKDIDVVRKDLDRTRYFTPNQAIEYGLI 326 Query: 200 DSILTH 205 D ++T Sbjct: 327 DKVITK 332 >UniRef50_B0LNX5 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Silene fruticosa RepID=B0LNX5_9CARY Length = 397 Score = 154 bits (389), Expect = 2e-36, Method: Composition-based stats. Identities = 61/174 (35%), Positives = 107/174 (61%), Gaps = 1/174 (0%) Query: 30 SFDIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMS 89 ++Y+ +R++FL ++++ +AN ++ +++L E+ +DI+L+INSPGG + AG+ Sbjct: 216 WVELYTLTYHKRLLFLCDKLKNELANKLINLLIYLSTEDTTEDIFLFINSPGGFLGAGLG 275 Query: 90 IYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDI 149 +Y+T+QF+ P VSTI +G A S+ AF+L GA KR P + VM+HQP T I Sbjct: 276 LYNTIQFVPPQVSTIALGIAGSISAFVLVGGALSKRVAYPCAXVMMHQPASTKHKNKTRI 335 Query: 150 -EIHAREILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEAVEYGLVDSI 202 + + ++L ++ + + TG++ + I D ER F+SA EA +G+VD + Sbjct: 336 CVMESFDLLTIRDMITNVYIQRTGKTKQVIYEDMERPFFMSATEAQVHGIVDHV 389 >UniRef50_A3DFX4 ATP-dependent Clp protease proteolytic subunit n=6 Tax=Bacteria RepID=A3DFX4_CLOTH Length = 242 Score = 153 bits (388), Expect = 2e-36, Method: Composition-based stats. Identities = 50/188 (26%), Positives = 85/188 (45%), Gaps = 4/188 (2%) Query: 22 EQTSRGERSFDIYSRLLKERVIFLTGQV--EDHMANLIVAQMLFLEAENPEKDIYLYINS 79 ++ R ++ R +++ G + E + + + + E + E DI ++INS Sbjct: 5 QKQKPVRRFWNWIQNDDGSRTLYIDGPIAEESWLGDEVTPKQFKSELLSGEGDITIWINS 64 Query: 80 PGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPL 139 PGG I A IY+ + K V+ G AAS + + AG G F P S +MIH P+ Sbjct: 65 PGGDIFAANQIYNMLMDYKGKVTVKIDGIAASAASVIAMAG--GDVFMSPVSMMMIHNPM 122 Query: 140 GGYQGQATDIEIHAREILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEAVEYGLV 199 G ++E + ++K + L TG S +I + + + +A +AVE G Sbjct: 123 TIAIGDTEEMEKAIAMLEEIKESIINAYELKTGLSRAKISHLMDAESWFNARKAVELGFA 182 Query: 200 DSILTHRN 207 D IL + Sbjct: 183 DGILFMED 190 >UniRef50_A3JIS6 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Marinobacter sp. ELB17 RepID=A3JIS6_9ALTE Length = 621 Score = 153 bits (388), Expect = 3e-36, Method: Composition-based stats. Identities = 44/168 (26%), Positives = 82/168 (48%), Gaps = 4/168 (2%) Query: 37 LLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIYDTMQF 96 LL + I++ G + + + A + L+ + + + + INS GG ++ ++IY+ + Sbjct: 8 LLAQNEIYIYGPIGEGNVSA-KAFVDALKTLDTAQTVNVRINSEGGDVSHAIAIYNALNE 66 Query: 97 IKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREI 156 + PDV G AAS +F+ AG K N+ +MIH+P G G + + + Sbjct: 67 L-PDVMIHIDGLAASSASFVAMAG--NKTLMAGNAILMIHRPWTGAVGDSDAMRQTGEIL 123 Query: 157 LKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEAVEYGLVDSILT 204 K + + A TG S +++ + +L+A EA+E G VD ++ Sbjct: 124 DKFQPILVSAYAKKTGLSDDKLNEMLAAETWLTAAEALELGFVDEVIE 171 >UniRef50_B7HV38 ATP-dependent Clp protease proteolytic subunit n=11 Tax=root RepID=B7HV38_BACC7 Length = 248 Score = 153 bits (386), Expect = 4e-36, Method: Composition-based stats. Identities = 40/161 (24%), Positives = 75/161 (46%), Gaps = 6/161 (3%) Query: 45 LTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIYDTMQFIKPDVSTI 104 + G ++ A + ++ ++AE I+++INS GG G++I + ++ ++ Sbjct: 35 IGGWFSENNAEAVRRKIQDVKAEK----IHVHINSGGGSAFDGVAICNQLKQHNAEIIVH 90 Query: 105 CMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREILKVKGRMN 164 G AAS + + AG K N+ +MIHQ G A E AR++ K+ + Sbjct: 91 IDGWAASAASVIAMAG--DKIIMPSNTMMMIHQASTFEYGNADLFEKTARDLRKIDSALA 148 Query: 165 ELMALHTGQSLEQIERDTERDRFLSAPEAVEYGLVDSILTH 205 + E++++ + + +L+A EAV GL D I Sbjct: 149 ASYKKRFVGTDEELKQLLKDETWLTAEEAVALGLADEIADE 189 >UniRef50_C1D8G7 ATP-dependent Clp protease proteolytic subunit n=4 Tax=Proteobacteria RepID=C1D8G7_LARHH Length = 252 Score = 153 bits (386), Expect = 4e-36, Method: Composition-based stats. Identities = 39/138 (28%), Positives = 61/138 (44%), Gaps = 2/138 (1%) Query: 69 PEKDIYLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCL 128 I+L INSPGG + A ++ ++ K + G AAS F+ AG + Sbjct: 65 DAGTIHLRINSPGGSVFAARAMEQALREHKARIVVHIDGIAASAATFIAMAG--DEIVMN 122 Query: 129 PNSRVMIHQPLGGYQGQATDIEIHAREILKVKGRMNELMALHTGQSLEQIERDTERDRFL 188 + MIH+ G A D+ A + K+ G + + A TG+ +E I + + Sbjct: 123 KGAMFMIHKAWTWTAGNADDLAKEAGLLAKIDGTLAQTYADRTGKDVETINGWMADETWF 182 Query: 189 SAPEAVEYGLVDSILTHR 206 +A EAVEYG D + Sbjct: 183 TADEAVEYGFADKLAETE 200 >UniRef50_B0LNM7 ATP-dependent Clp protease proteolytic subunit n=2 Tax=Silene RepID=B0LNM7_SILCO Length = 247 Score = 152 bits (385), Expect = 5e-36, Method: Composition-based stats. Identities = 60/219 (27%), Positives = 93/219 (42%), Gaps = 40/219 (18%) Query: 22 EQTSRGERSFDIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPG 81 +I + L ++R++F+ +++ + I +L L EN KD L+INS G Sbjct: 15 PDGETNSTWTEIQNFLYEKRILFIFEEIKPKVTCEITGLLLCLSNENEYKDFTLFINSAG 74 Query: 82 GVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGG 141 G + IYDTMQ + P V T+ +G AASMGA +L G GKR PN R+ IH P Sbjct: 75 GKTRDALPIYDTMQVVAPAVRTVGIGVAASMGALILLGGEMGKRAASPNCRIKIHLPASA 134 Query: 142 YQG----------------------------------------QATDIEIHAREILKVKG 161 + D E+L+++ Sbjct: 135 FYTTDSDSNSDSDSNSDSTSDSNSDTDKKKKEKDPKKKKEQSRSVEDFSDGVGEMLRLRE 194 Query: 162 RMNELMALHTGQSLEQIERDTERDRFLSAPEAVEYGLVD 200 ++ A T + + IE+D R F+S+ EA YG++D Sbjct: 195 EFVKIYAKRTQKPISVIEKDLARGLFMSSEEAKAYGIID 233 >UniRef50_B7ZIH9 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Ephedra equisetina RepID=B7ZIH9_EPHEU Length = 221 Score = 152 bits (385), Expect = 6e-36, Method: Composition-based stats. Identities = 56/172 (32%), Positives = 95/172 (55%), Gaps = 5/172 (2%) Query: 37 LLKERVIFLTGQVEDHMANLIVAQMLFLEAEN----PEKDIYLYINSPGGVITAGMSIYD 92 + + R IFL V++ + ++ V +L+L ++ + I++YINS GG I G+SI+D Sbjct: 1 MSRTRCIFLGQPVDEDIGSIFVGILLYLFIDDIRKGKSRQIFMYINSCGGAILPGLSIFD 60 Query: 93 TMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQ-GQATDIEI 151 M ++ + TI +G AS +L+AG G R P+SR+MIHQP + G A Sbjct: 61 IMLQLRETIHTIGLGLVASTATLVLSAGTFGFRNTGPHSRIMIHQPRASLRDGPAWLFAK 120 Query: 152 HAREILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEAVEYGLVDSIL 203 A + +++ + + L T Q E IE +++ ++S EAV++GLVD + Sbjct: 121 DAFFVQQLRKMIVQCYCLRTPQFEELIENALDKNTYMSPEEAVDFGLVDRVA 172 >UniRef50_B7UZW7 ATP-dependent Clp protease proteolytic subunit n=20 Tax=root RepID=B7UZW7_PSEA8 Length = 296 Score = 152 bits (384), Expect = 7e-36, Method: Composition-based stats. Identities = 43/210 (20%), Positives = 83/210 (39%), Gaps = 20/210 (9%) Query: 15 ALVPMVIEQTSRGERSFDIYSRLLK--------------ERVIFLTGQVEDHM--ANLIV 58 +P E R D+ + L + I + + + Sbjct: 4 RNLPAAPEARPRSGVQCDLAPKALDAWRPELRAASGDNPDSTITIYEPIGYDWWTGEGVT 63 Query: 59 AQMLF--LEAENPEKDIYLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFL 116 A+ + L + + D+ + INSPGG + G++IY+ ++ K V+ +G AAS +F+ Sbjct: 64 AKRIAGALRSIGSDIDVTVNINSPGGDVFEGLAIYNLLREHKGKVTVNIIGLAASAASFI 123 Query: 117 LTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREILKVKGRMNELMALHTGQSLE 176 AG + + +MIH G D+ A + + ++ A TG ++ Sbjct: 124 AMAG--DEIRIGRAAFLMIHNAWLIAMGNRNDLREIADWLEPFDMTLADIYAQRTGIDID 181 Query: 177 QIERDTERDRFLSAPEAVEYGLVDSILTHR 206 I + + + ++ EAV+ G D+ L Sbjct: 182 DIVKQMDAETWIGGREAVDKGWADAFLESD 211 >UniRef50_A3DG62 ATP-dependent Clp protease proteolytic subunit n=4 Tax=root RepID=A3DG62_CLOTH Length = 247 Score = 152 bits (384), Expect = 7e-36, Method: Composition-based stats. Identities = 44/139 (31%), Positives = 70/139 (50%), Gaps = 2/139 (1%) Query: 69 PEKDIYLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCL 128 KDI ++INS GG + A IY ++ K V G A S + + AG + Sbjct: 53 KGKDINVWINSYGGDVYAASRIYTGLKEHKGKVKVKIDGVAISAASVIAMAG--DEILMS 110 Query: 129 PNSRVMIHQPLGGYQGQATDIEIHAREILKVKGRMNELMALHTGQSLEQIERDTERDRFL 188 P S +M+H P G +QG+A D+ A + +VK + L TG+S +I + + + ++ Sbjct: 111 PTSIIMLHNPWGTFQGEAKDLRHGADVLDEVKETIINAYQLKTGKSRAKISQMMDEETWM 170 Query: 189 SAPEAVEYGLVDSILTHRN 207 SA +AV G D +L +N Sbjct: 171 SAKKAVAEGFADGMLYEKN 189 >UniRef50_Q3Z3P3 ATP-dependent Clp protease proteolytic subunit n=5 Tax=Enterobacteriaceae RepID=Q3Z3P3_SHISS Length = 381 Score = 152 bits (383), Expect = 9e-36, Method: Composition-based stats. Identities = 41/161 (25%), Positives = 71/161 (44%), Gaps = 3/161 (1%) Query: 43 IFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIYDTMQFIKPDVS 102 + + ++ + A + A +I+L I+SPGG I G++IY+ ++ Sbjct: 16 VRIYDEIGGYGVKA-SALTDEINACGNVPEIHLRIHSPGGDIFEGLAIYNALKNHPAKKI 74 Query: 103 TICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREILKVKGR 162 G AASM +F+ G N+ +MIH P G G + D+ A + K+ Sbjct: 75 VHIEGMAASMASFIAMCG--DHIVMPENAMMMIHAPRGVTAGVSGDVRRFADLMDKLGDT 132 Query: 163 MNELMALHTGQSLEQIERDTERDRFLSAPEAVEYGLVDSIL 203 M E A TG+S ++I E + ++ E G D ++ Sbjct: 133 MAETYAGRTGRSKQEITAMMEAETWMDGNECKANGFADEVI 173 >UniRef50_C5CJP6 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Variovorax paradoxus S110 RepID=C5CJP6_VARPS Length = 227 Score = 151 bits (381), Expect = 2e-35, Method: Composition-based stats. Identities = 45/171 (26%), Positives = 78/171 (45%), Gaps = 5/171 (2%) Query: 39 KERVIFLTGQVEDHM-ANLIVAQMLF--LEAENPEKDIYLYINSPGGVITAGMSIYDTMQ 95 K I++ + + + A+ ++A K + +YINSPGG + G++IY+ ++ Sbjct: 10 KRGEIYVYDAIGGGFFSEGVTAKSFADSVKALGAVKALDIYINSPGGSVFEGLAIYNQIK 69 Query: 96 FIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHARE 155 + G AAS+ + + AG + + N +MIH P G G A D+ A Sbjct: 70 RFDGEKIVHVDGIAASIASVIAMAGDEVRIAA--NGTIMIHDPWGMAMGTAADMRKQAES 127 Query: 156 ILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEAVEYGLVDSILTHR 206 + KV+ + E TG E I + +++A EAVE G S + + Sbjct: 128 LDKVRDVLLENYVARTGGKREDISSWMTAETWMNADEAVERGFATSKVEEK 178 >UniRef50_A8U7Z4 ATP-dependent Clp protease proteolytic subunit n=4 Tax=Lactobacillales RepID=A8U7Z4_9LACT Length = 246 Score = 150 bits (380), Expect = 2e-35, Method: Composition-based stats. Identities = 37/169 (21%), Positives = 75/169 (44%), Gaps = 5/169 (2%) Query: 42 VIFLTGQVED---HMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIYDTMQFIK 98 ++ L+G + I A+++ + DI +Y+NS GG + G+ IY+ ++ Sbjct: 21 ILTLSGTIRQRYWDDDKSIDAKLVSDSLDGVTDDIVIYLNSTGGDVFQGIEIYNYLKNHS 80 Query: 99 PDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREILK 158 ++ G AAS F++ + + MIH+ G D++ + Sbjct: 81 SHITVEVTGTAASAATFIVAGA--DEAIMNTGTSFMIHEASSFAWGNKADLKKTLNALET 138 Query: 159 VKGRMNELMALHTGQSLEQIERDTERDRFLSAPEAVEYGLVDSILTHRN 207 + + + TGQS EQ+ E +++ +A EAV+YG + + ++ Sbjct: 139 IDESIIAIYTEKTGQSNEQLNDWMEEEKWFTAEEAVKYGFANKVKENKK 187 >UniRef50_B2TQV1 ATP-dependent Clp protease proteolytic subunit n=2 Tax=Clostridium botulinum RepID=B2TQV1_CLOBB Length = 247 Score = 150 bits (380), Expect = 2e-35, Method: Composition-based stats. Identities = 46/192 (23%), Positives = 86/192 (44%), Gaps = 9/192 (4%) Query: 21 IEQTSRGERSFDIY--SRLLKERVIFLTGQ-VEDHMANLIVAQMLFLEAENPEKDIYLYI 77 I+Q + DIY + + + TG+ +E + + Q+ LE+ +I LYI Sbjct: 8 IKQQANKPNVLDIYIYDNVEGDSYNWWTGEKMESETSANYIKQV--LESNQSTSEINLYI 65 Query: 78 NSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQ 137 NS GG + G+ IY+ ++ V+ G A S+ + + G K N+ +MIH Sbjct: 66 NSYGGEVKEGLGIYNQLKRHPAQVNVYIDGFACSIASVIAMVG--DKVVMGTNALMMIHH 123 Query: 138 PLGGYQGQATDIEIHAREILKVKGRMNELMALHTGQSLEQ--IERDTERDRFLSAPEAVE 195 G G A ++ A ++ + G+ L++ +++ + +L+A + +E Sbjct: 124 ASIGCYGNAEELRKAANDVEVIDQASCSSYLTKAGEKLDEATLKQLLDNQTWLNASQCLE 183 Query: 196 YGLVDSILTHRN 207 YGL D I + Sbjct: 184 YGLCDEIAGQED 195 >UniRef50_C1ZNA8 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Planctomyces limnophilus DSM 3776 RepID=C1ZNA8_PLALI Length = 262 Score = 150 bits (380), Expect = 2e-35, Method: Composition-based stats. Identities = 35/172 (20%), Positives = 74/172 (43%), Gaps = 5/172 (2%) Query: 39 KERVIFLTGQVEDHMANLIVAQMLFLEAEN---PEKDIYLYINSPGGVITAGMSIYDTMQ 95 E I++ + A + E +N ++ + INS GG + +IY ++ Sbjct: 27 GENEIYVYDVIGPADWGYFGAATMKDELKNLGSDVTEVVIRINSVGGYVGEASAIYQLLK 86 Query: 96 FIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHARE 155 ++ G+A S +++ AG K + +M+H P G A D+ A Sbjct: 87 EHPANIHVKIDGEAISCASWIAMAG--DKITIAEHGLMMVHDPSTWISGTADDLRKEAEV 144 Query: 156 ILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEAVEYGLVDSILTHRN 207 + K + + A +G +E +++ + +++A +A + G VD I +++ Sbjct: 145 LDSYKEVIAGIYAARSGTDVEDVKKMMSDETWMTATQAKDKGFVDEISANKS 196 >UniRef50_B6G8S8 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Collinsella stercoris DSM 13279 RepID=B6G8S8_9ACTN Length = 193 Score = 150 bits (379), Expect = 3e-35, Method: Composition-based stats. Identities = 58/193 (30%), Positives = 99/193 (51%), Gaps = 4/193 (2%) Query: 13 HMALVPMVIEQTSRGE-RSFDIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEK 71 + P I G D+ S L RV+ L QV + + ++A ML LE ++PE Sbjct: 1 MPIINPANITNLDNGRCDHLDVLSELYNSRVLMLNEQVTPAVCSQLIANMLVLERKDPEA 60 Query: 72 DIYLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNS 131 I L ++SPGG + AG+ + D M+ + V T+ G ASM + +L G R P++ Sbjct: 61 PITLLVSSPGGDVYAGLGLIDVMRDLSCPVDTVGYGLVASMASVILACGR--HRSAYPHT 118 Query: 132 RVMIHQPLGGYQG-QATDIEIHAREILKVKGRMNELMALHTGQSLEQIERDTERDRFLSA 190 +++HQ + G Q TDI I A ++ +++E++A S +++ TERD + Sbjct: 119 NILLHQLMTGAGMSQQTDISIVANHAASLRAKLDEMLAERMSLSADEVHELTERDCWCDV 178 Query: 191 PEAVEYGLVDSIL 203 A+E G++D ++ Sbjct: 179 GRALELGVIDEVI 191 >UniRef50_B9CLK4 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Atopobium rimae ATCC 49626 RepID=B9CLK4_9ACTN Length = 260 Score = 150 bits (378), Expect = 3e-35, Method: Composition-based stats. Identities = 37/147 (25%), Positives = 71/147 (48%), Gaps = 4/147 (2%) Query: 56 LIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAF 115 IV + L + K + ++INS GG + G++IY+ ++ +V T+C G A S+ + Sbjct: 49 DIVKALSELS--DDVKTVEVHINSYGGEVMQGVAIYNALRDCGREVVTVCDGFACSIASV 106 Query: 116 LLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREILKVKGRMNELMALHTGQSL 175 + AG+ +R P S +M+H P +G A D+ A + + T Sbjct: 107 IFMAGS--RRIMRPASLLMLHNPWVSARGNAQDLRKQADTLDTIAELSKTAYMTGTSLDR 164 Query: 176 EQIERDTERDRFLSAPEAVEYGLVDSI 202 E ++ + + ++S +A+E+GL + Sbjct: 165 ETLDAVMDAETWVSPEQALEWGLATEV 191 >UniRef50_A5KJS2 ATP-dependent Clp protease proteolytic subunit n=6 Tax=Firmicutes RepID=A5KJS2_9FIRM Length = 268 Score = 149 bits (377), Expect = 4e-35, Method: Composition-based stats. Identities = 46/170 (27%), Positives = 78/170 (45%), Gaps = 4/170 (2%) Query: 40 ERVIFLTGQVEDHM--ANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIYDTMQFI 97 ER +FL G + D + + Q+ E +I ++INSPGG + A IY+ ++ Sbjct: 20 ERTLFLNGMISDETWYGDEVTPQLFKDELNAGNGNITVWINSPGGDVFAAAQIYNMLRDY 79 Query: 98 KPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREIL 157 K V+ G AAS + + AG P + +MIH P G+A D++ + Sbjct: 80 KGSVTVKIDGIAASAASVIAMAG--DTVCVSPVAMMMIHNPATMAMGEAKDMQKAIAMLN 137 Query: 158 KVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEAVEYGLVDSILTHRN 207 +VK + TG + ++ + + + +A +AVE G D IL + Sbjct: 138 EVKESILNAYEFKTGLTRARLSHMMDDETWFNAKKAVELGFADKILFDSD 187 >UniRef50_Q2NPI5 ClpP family protein n=3 Tax=unclassified Siphoviridae RepID=Q2NPI5_9CAUD Length = 245 Score = 149 bits (377), Expect = 5e-35, Method: Composition-based stats. Identities = 48/205 (23%), Positives = 91/205 (44%), Gaps = 6/205 (2%) Query: 4 SGERDNFAPHMALVPMVIEQTSRGERSFDIYSRLL----KERVIFLTGQVEDHMANLIVA 59 S AP L P I ++ + +DI R +E IF +D A Sbjct: 2 SNRSMPAAPEGRLDPDTISKSKEIQAKWDIAPRAAWRDGREINIFSVIGRDDLNDGTTSA 61 Query: 60 QMLFLEAENPEKDIYLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTA 119 Q+ D+ + I+SPGG + AG++IY+ + + V+ +G+AAS + + + Sbjct: 62 QIGSFLEAMGPGDVTVNIDSPGGDMFAGLAIYNQLIAHQGKVTVNVVGRAASAASVIAMS 121 Query: 120 GAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREILKVKGRMNELMALHTGQSLEQIE 179 G + ++ +MIH G A ++ A + M ++ + Q+ + + Sbjct: 122 G--DQINMHTSAFLMIHNCHLVIGGNAKELMSVAAMMEPFDSAMADIYVARSSQAKDTVV 179 Query: 180 RDTERDRFLSAPEAVEYGLVDSILT 204 + + + +++A EAV+ G DSI+T Sbjct: 180 QMMDNETWMNAEEAVKMGFADSIVT 204 >UniRef50_C3WVP2 ATP-dependent Clp protease proteolytic subunit n=2 Tax=Fusobacterium RepID=C3WVP2_9FUSO Length = 367 Score = 149 bits (376), Expect = 6e-35, Method: Composition-based stats. Identities = 40/191 (20%), Positives = 76/191 (39%), Gaps = 11/191 (5%) Query: 26 RGERSFDIYSRLLKERVIFLTGQVEDHMANLI-----VAQMLFLEAENPEKDIYLYINSP 80 + + F+I + I + G + L+ I L +NSP Sbjct: 5 QKNKFFEIKNLTENTAEIRIYGTITKWAWEDYGEVSSANFAKELQNYKNVSQINLRVNSP 64 Query: 81 GGVITAGMSIYDTMQFI----KPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIH 136 GG + +IY+ ++ ++ G AAS +FL+ + K + MIH Sbjct: 65 GGDVFEASAIYNLLKDFAKVNNIQITGYIDGLAASAASFLILCAS--KIVMGIGALFMIH 122 Query: 137 QPLGGYQGQATDIEIHAREILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEAVEY 196 PL G + +++ + VK + ++ + S E+I +++ A EA+E Sbjct: 123 NPLTYAYGNSIELQKQIELLDTVKESILDIYCTKSKLSREEIAEKMNNEKWFRANEALEA 182 Query: 197 GLVDSILTHRN 207 G +D I+ + N Sbjct: 183 GFIDEIVENDN 193 >UniRef50_A8IH07 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Chlamydomonas reinhardtii RepID=A8IH07_CHLRE Length = 415 Score = 149 bits (376), Expect = 6e-35, Method: Composition-based stats. Identities = 55/180 (30%), Positives = 95/180 (52%), Gaps = 11/180 (6%) Query: 38 LKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGG---------VITAGM 88 +R+++L + + L+VA++L+LE + I + INS G + G+ Sbjct: 57 FDQRIVYLGMPLVPAVTELMVAELLYLEKQGATLPIEMLINSSGTTRQDGEILSFDSEGV 116 Query: 89 SIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQ--A 146 ++ TM FIK +ST+ MG A +L+ G KG R LP+S MI QP GQ A Sbjct: 117 ALTSTMGFIKNPISTVNMGLAVGWSCVVLSFGRKGWRKSLPHSLAMIQQPRVPPTGQRQA 176 Query: 147 TDIEIHAREILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEAVEYGLVDSILTHR 206 ++ I RE+L K + + +L TG +++++ D +R ++ +A+EYG++D I+ Sbjct: 177 IEVHIKWREVLDYKRELLRMFSLGTGLPVDKLDADMQRPLYMRPQDALEYGIIDEIIEPN 236 >UniRef50_Q0AG16 ATP-dependent Clp protease proteolytic subunit n=5 Tax=root RepID=Q0AG16_NITEC Length = 228 Score = 148 bits (375), Expect = 8e-35, Method: Composition-based stats. Identities = 46/173 (26%), Positives = 73/173 (42%), Gaps = 12/173 (6%) Query: 39 KERVIFLTGQVEDH------MANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIYD 92 E I+L + A V +++ ++A I+L INSPGG + + +I Sbjct: 9 DEATIYLYDTIVSDDFWGGVTAISFVKELMAIKA----PVIHLRINSPGGDVFSARAIET 64 Query: 93 TMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIH 152 ++ +V G AAS +++ A + MIH+ G A D+ Sbjct: 65 AIREHNSEVIAHIDGVAASAASYIALAA--DNIVIAEGAFYMIHKAWSFAMGNADDLLEM 122 Query: 153 AREILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEAVEYGLVDSILTH 205 A + KV + A TGQ+ +QI + + SA EAVEYG DS+ Sbjct: 123 AALLEKVDESLVTTYAKRTGQAEDQIRDWMRNETWFSAAEAVEYGFADSVAED 175 >UniRef50_C2KJ97 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Leuconostoc mesenteroides subsp. cremoris ATCC 19254 RepID=C2KJ97_LEUMC Length = 235 Score = 148 bits (375), Expect = 8e-35, Method: Composition-based stats. Identities = 40/140 (28%), Positives = 64/140 (45%), Gaps = 2/140 (1%) Query: 63 FLEAENPEKDIYLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAK 122 L+ I L INS GG + G++IY+ ++ K V+ G AAS+ + + AG Sbjct: 40 ALKELGDVSTINLSINSGGGSVFDGIAIYNMLKSHKATVNVYIEGLAASIASVIAMAG-- 97 Query: 123 GKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREILKVKGRMNELMALHTGQSLEQIERDT 182 S +M+H P QG A ++ A + K + ++ + TG S + I Sbjct: 98 DTITMRSGSMIMVHMPWTLSQGNAEEMRKTADTLEKTGDSIVDIYSERTGISSDDIRNIM 157 Query: 183 ERDRFLSAPEAVEYGLVDSI 202 + +LSA EAVE G + Sbjct: 158 NDETWLSAEEAVEQGWATKL 177 >UniRef50_B7QPY3 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Ruegeria sp. R11 RepID=B7QPY3_9RHOB Length = 377 Score = 148 bits (374), Expect = 1e-34, Method: Composition-based stats. Identities = 35/143 (24%), Positives = 69/143 (48%), Gaps = 2/143 (1%) Query: 58 VAQMLFLEAENPEKDIYLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLL 117 + + LE + DI + +NS GG G++IY+ ++ +V+ + G AAS + + Sbjct: 28 IDVLEALEELGDDADITVRVNSGGGYTDQGIAIYNALKAHGGEVTVVVDGVAASAASLIS 87 Query: 118 TAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREILKVKGRMNELMALHTGQSLEQ 177 AG + + +M+H P G G A +I I R + ++ M + A +G + Sbjct: 88 MAG--DQIIMRRGATMMLHDPSGFASGMADEIAIAVRALDRIGAVMASIYAEQSGDDPDD 145 Query: 178 IERDTERDRFLSAPEAVEYGLVD 200 + ++ + + +L+ EAV+ G Sbjct: 146 LRKEMKAELWLTGEEAVKRGFAT 168 >UniRef50_B1BPQ5 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Clostridium perfringens E str. JGS1987 RepID=B1BPQ5_CLOPE Length = 672 Score = 147 bits (372), Expect = 2e-34, Method: Composition-based stats. Identities = 40/164 (24%), Positives = 67/164 (40%), Gaps = 7/164 (4%) Query: 44 FLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIYDTMQFIKPDVST 103 + + ++ Q+ E + + INSPGG I A IY ++ K ++ Sbjct: 19 YEWLGYSYTSPSKVINQIKAANGEK----LTIKINSPGGDIFAASDIYTELREYKGEIEI 74 Query: 104 ICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREILKVKGRM 163 G AAS + + AG K P +++M+H G G D+E A + + Sbjct: 75 KITGMAASAASVIAMAG---KSSMSPTAQLMVHNVSTGTWGDYRDMEHTAEVLKNANDTI 131 Query: 164 NELMALHTGQSLEQIERDTERDRFLSAPEAVEYGLVDSILTHRN 207 TG S E+ + +LSA +A E G +D I+ + Sbjct: 132 ANAYMCKTGMSREEALELMNNETYLSATKAKELGFIDEIMFEES 175 >UniRef50_B1JDT0 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Pseudomonas putida W619 RepID=B1JDT0_PSEPW Length = 620 Score = 147 bits (371), Expect = 2e-34, Method: Composition-based stats. Identities = 36/158 (22%), Positives = 65/158 (41%), Gaps = 8/158 (5%) Query: 45 LTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIYDTMQFIKPDVSTI 104 + ++ A + A ++ + I + INSPGG +T ++IY ++ V+ I Sbjct: 5 IYDVIDAATAQRVKAIVV------GQMPITVQINSPGGSVTDALAIYTVLRKHTGRVTAI 58 Query: 105 CMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREILKVKGRMN 164 G AS + A + +S +M+H P G A ++ A + M Sbjct: 59 VDGLCASAATLVALAA--DEIVMAEHSLMMVHNPWTVASGDADEMRKTADTLDVASREMT 116 Query: 165 ELMALHTGQSLEQIERDTERDRFLSAPEAVEYGLVDSI 202 L TG S E+I + + ++ EAV+ G + Sbjct: 117 ALYTERTGLSAEKITAIMGAETWFNSYEAVDAGFAHRV 154 >UniRef50_A3UVN6 ATP-dependent Clp protease proteolytic subunit n=3 Tax=Vibrionaceae RepID=A3UVN6_VIBSP Length = 670 Score = 147 bits (371), Expect = 2e-34, Method: Composition-based stats. Identities = 41/185 (22%), Positives = 83/185 (44%), Gaps = 9/185 (4%) Query: 25 SRGERSFDIYSRLLKERVIFLTGQVEDHM--ANLIVAQMLFLEAENPEKDIYLYINSPGG 82 + + + + +++ G + A I+A + K++ L + S GG Sbjct: 3 KPNKSWYTLKNEADV-IKVWVHGDISAWDIDATEIIAAL----QVANGKEVELRMLSGGG 57 Query: 83 VITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGY 142 + G+++Y+ ++ K V I G AAS+ ++L A N+ +MIH P G Sbjct: 58 SVYQGLAMYNALKAHKGKVVGIVDGMAASIATYVLLAC--DSIRMPENAMLMIHNPAIGA 115 Query: 143 QGQATDIEIHAREILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEAVEYGLVDSI 202 G +I +++ ++E A +GQ LE++ E + + +A A ++GLVD + Sbjct: 116 WGGEKEINSALQQLQAATKTISEAYAEKSGQPLEEVLTAMESETWFTAQAAKDWGLVDEV 175 Query: 203 LTHRN 207 + + Sbjct: 176 VEAVD 180 >UniRef50_A5F9J4 ATP-dependent Clp protease proteolytic subunit n=26 Tax=Firmicutes RepID=A5F9J4_CLOK5 Length = 255 Score = 147 bits (371), Expect = 3e-34, Method: Composition-based stats. Identities = 47/171 (27%), Positives = 76/171 (44%), Gaps = 8/171 (4%) Query: 43 IFLTGQV----EDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIYDTMQFIK 98 IF+ G++ D + L+ I L+INSPGG + G++I + ++ K Sbjct: 22 IFIYGEIVSYKWDDTDTTAASFKKDLDDLGDVNTINLHINSPGGNVFEGVAIGNMLKQHK 81 Query: 99 PDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREILK 158 V+ AAS+ + + +G NS +MIH PL G A D A ++ K Sbjct: 82 AQVNVYVDALAASIASIIAMSG--NTILMPKNSMMMIHNPLSIAWGNAKDFRKKADDLDK 139 Query: 159 VKGRMNELMALHTGQSLEQ--IERDTERDRFLSAPEAVEYGLVDSILTHRN 207 + M G L+Q +++ + D +LSA +A YGL D + N Sbjct: 140 IGLSMQTTYLNKAGDKLDQDTLQKLMDNDTWLSADDAYSYGLCDVVEEENN 190 >UniRef50_C4ML05 P05 n=1 Tax=Xanthomonas phage phiL7 RepID=C4ML05_9CAUD Length = 245 Score = 146 bits (368), Expect = 5e-34, Method: Composition-based stats. Identities = 48/202 (23%), Positives = 90/202 (44%), Gaps = 6/202 (2%) Query: 9 NFAPHMALVP--MVIEQTSRGERSFDIYSRLLKERVIFLTGQVEDHMANL--IVAQMLFL 64 AP + + + + + + ++ R I + G++ + + AQ+ + Sbjct: 7 PTAPEGRVAACKARVPEAANARWAGTPQAAVMHGRAIDIFGEIGEDLYGEGTTSAQISQM 66 Query: 65 EAENPEKDIYLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGK 124 + D+ + I+SPGG + AG++IY+ ++ V+ +G AAS + + AG Sbjct: 67 LRDMGPGDVTVNIDSPGGDMFAGLAIYNQLRAHDGVVTVNVVGTAASAASVIAMAG--DV 124 Query: 125 RFCLPNSRVMIHQPLGGYQGQATDIEIHAREILKVKGRMNELMALHTGQSLEQIERDTER 184 P + +MIHQ G + D A + M E+ A TG+ L ++E+ Sbjct: 125 VNMHPAAFIMIHQTWLLAAGNSRDFIALAEMLAPFDKAMAEIYASRTGKPLAEVEQLMAE 184 Query: 185 DRFLSAPEAVEYGLVDSILTHR 206 + + +A EAV YGL D +L Sbjct: 185 ETWFNAEEAVAYGLADKVLDPE 206 >UniRef50_C5R880 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Weissella paramesenteroides ATCC 33313 RepID=C5R880_WEIPA Length = 242 Score = 145 bits (367), Expect = 6e-34, Method: Composition-based stats. Identities = 41/163 (25%), Positives = 73/163 (44%), Gaps = 6/163 (3%) Query: 43 IFLTGQVEDH--MANLIVAQMLF--LEAENPEKDIYLYINSPGGVITAGMSIYDTMQFIK 98 I + G++ + + A L+ P K I + INSPGG + G++IY+ ++ Sbjct: 15 IHIDGEIVSEKLWDSDVSATDFRDSLKELGPVKTINMSINSPGGSVFDGIAIYNMLKKNP 74 Query: 99 PDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREILK 158 V+ G AAS+ + + AG S +MIH P G A+++ A + + Sbjct: 75 ATVNVTVEGLAASIASVIAMAG--DTLTMDTGSMLMIHNPFTMAVGNASELREMADTLDQ 132 Query: 159 VKGRMNELMALHTGQSLEQIERDTERDRFLSAPEAVEYGLVDS 201 ++ + TG E I+ + + +L+A EA+ G D Sbjct: 133 IRESSVNIYHEKTGIDKEAIKSVMDNETWLTADEAITAGWADQ 175 >UniRef50_C2BG30 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Anaerococcus lactolyticus ATCC 51172 RepID=C2BG30_9FIRM Length = 380 Score = 145 bits (367), Expect = 6e-34, Method: Composition-based stats. Identities = 43/178 (24%), Positives = 80/178 (44%), Gaps = 9/178 (5%) Query: 31 FDIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSI 90 IY + +++ + G++ + + +LE E+ I + INS GG + A +I Sbjct: 22 VTIYGNI-SDKIDWELGEINP---EFFSSDLAYLEQEDINTLI-IRINSAGGDVFAATAI 76 Query: 91 YDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQG--QATD 148 Y ++ K G AAS + AG + PN +MIH PL G +G A D Sbjct: 77 YSRLKEFKAKKIVKIDGWAASAATIIAMAG--DEIEIAPNGSLMIHDPLFGLEGYFNAKD 134 Query: 149 IEIHAREILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEAVEYGLVDSILTHR 206 + + ++ +K + TG++ E++ + E + + + EAV+ G D ++ Sbjct: 135 LIKYIEQLETIKKSIINAYKTKTGKTEEELAQLMEAETWYTGQEAVDAGFCDRLMFEE 192 >UniRef50_B1X3L5 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Paulinella chromatophora RepID=B1X3L5_PAUCH Length = 219 Score = 145 bits (366), Expect = 8e-34, Method: Composition-based stats. Identities = 68/201 (33%), Positives = 107/201 (53%), Gaps = 22/201 (10%) Query: 24 TSRGERSFDIYSRLLKERVIFLTGQV------------EDHMANLIVAQMLFLEAENPEK 71 E D+ S LL ER+I+L + ++ L++AQ+L LE E+ Sbjct: 17 KYGIESMSDLASILLSERIIYLGMALASDDETRQSFSLGMNVTQLMIAQLLCLEFESNSA 76 Query: 72 DIYLYINSPG---------GVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAK 122 I +YINS G G T +IYDT++FI+ V T C+G A LL GA Sbjct: 77 -ITIYINSTGSTDINSNAIGHETEAFAIYDTIRFIESPVHTFCVGVAMGTATMLLACGAS 135 Query: 123 GKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREILKVKGRMNELMALHTGQSLEQIERDT 182 G R LPN+ ++++QP G +TDI I ++L + M+E++++H G+SL+QI D Sbjct: 136 GCRASLPNASIILNQPYNYVGGSSTDINIQVEQLLLSRSIMHEILSIHIGKSLQQIRSDC 195 Query: 183 ERDRFLSAPEAVEYGLVDSIL 203 R L+A +A+ YG++D ++ Sbjct: 196 NRIHHLTAYQALHYGIIDDVI 216 >UniRef50_B3JP66 ATP-dependent Clp protease proteolytic subunit n=10 Tax=Bacteroidales RepID=B3JP66_9BACE Length = 368 Score = 145 bits (366), Expect = 9e-34, Method: Composition-based stats. Identities = 50/182 (27%), Positives = 93/182 (51%), Gaps = 9/182 (4%) Query: 28 ERSFDIYSRLLKERVIFLTGQVEDHM---ANLIVAQMLFLEAENPEKDIYLYINSPGGVI 84 R F+I + IFL G + D+ + I ++ +EAE + I++ INS GG + Sbjct: 24 SRFFNITTSDDGTSTIFLYGDIGDYTEVQSGRIAQEL--MEAERVSRRIHVRINSNGGEV 81 Query: 85 TAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQG 144 +G++I++ ++ + D+ G AASM + + G + +R+M+H GG G Sbjct: 82 YSGIAIFNALRHSQADIRIYVDGIAASMASVIALCGKPVE--MSKYARLMLHSVSGGCYG 139 Query: 145 QATDIEIHAREILKVKGRMNELMALHTGQSLEQIERDT--ERDRFLSAPEAVEYGLVDSI 202 D++ EI ++G ++E+ A G S E++++ D +L+A EA++ G +D I Sbjct: 140 NKQDLQRCMEEIESLEGSLSEIYAERLGMSKEEVKQTYFDGEDHWLTAKEALDLGFIDDI 199 Query: 203 LT 204 Sbjct: 200 YD 201 >UniRef50_A6N1Z7 Clp protease n=1 Tax=Microbacterium phage Min1 RepID=A6N1Z7_9CAUD Length = 399 Score = 145 bits (365), Expect = 1e-33, Method: Composition-based stats. Identities = 40/159 (25%), Positives = 73/159 (45%), Gaps = 3/159 (1%) Query: 43 IFLTGQVEDHMANLIVAQMLFLEAEN-PEKDIYLYINSPGGVITAGMSIYDTMQFIKPDV 101 +++ ++ + I + L E ++ ++INSPGG G++I + ++ K V Sbjct: 32 VYIYDEIGESWWGGIAPKALVDEITALDVAEMTVHINSPGGAAWDGITIMNALRAHKAQV 91 Query: 102 STICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREILKVKG 161 + G AAS + + G +++MIH GG G A ++E A + K+ Sbjct: 92 HVVVDGLAASAASVIAMGG--DTITMNRGAQMMIHDASGGVWGNAAEVEAVATILHKLSD 149 Query: 162 RMNELMALHTGQSLEQIERDTERDRFLSAPEAVEYGLVD 200 + + A TG + EQ + + + +A EAV GL D Sbjct: 150 SIADTYAARTGGTREQWRAVMKDEAWYTAEEAVAAGLAD 188 >UniRef50_C7Q187 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Catenulispora acidiphila DSM 44928 RepID=C7Q187_CATAD Length = 564 Score = 145 bits (365), Expect = 1e-33, Method: Composition-based stats. Identities = 41/182 (22%), Positives = 76/182 (41%), Gaps = 6/182 (3%) Query: 24 TSRGERSFDIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGV 83 + F I ++ + + +V + AQ E + + I L++NSPGG Sbjct: 16 RAGRNDWFRIKAQADGPTQVMIYDEVGFF---GVTAQDFIDEMKQVDGPIDLHLNSPGGE 72 Query: 84 ITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQ 143 + G++I+ + + V+T AAS+ + + AG + N+ +MIH G Sbjct: 73 VWDGIAIHAYLSG-RGGVTTYVDALAASIASVIAMAGE--QIVMGRNASLMIHDGWGLVI 129 Query: 144 GQATDIEIHAREILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEAVEYGLVDSIL 203 G A D+ A + +V + + A TG+ + + + EAV+ GL D + Sbjct: 130 GNAADMREQAELLDRVSDNIASIYADRTGKPKDDWRAAMLAETWYIGQEAVDAGLADRMA 189 Query: 204 TH 205 Sbjct: 190 DP 191 >UniRef50_B8L012 Peptidase S14, ClpP n=1 Tax=Stenotrophomonas sp. SKA14 RepID=B8L012_9GAMM Length = 245 Score = 144 bits (364), Expect = 2e-33, Method: Composition-based stats. Identities = 41/167 (24%), Positives = 65/167 (38%), Gaps = 4/167 (2%) Query: 39 KERVIFLTGQVEDHMANLIVAQMLFLEAENPEKD-IYLYINSPGGVITAGMSIYDTMQFI 97 KE I+L G + + I M + D I+L I+SPGG + A S+ + Sbjct: 27 KEATIYLHGVIGGWWGD-IDETMFAQAMAGIDADVIHLRIDSPGGDVFAARSMMTAIAQH 85 Query: 98 KPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREIL 157 K V G AAS + A K + MIH G D+ + Sbjct: 86 KATVIAHIDGLAASAMTGVCMAC--DKVEISQGAGFMIHNAWTITVGNKADMIKTGELLA 143 Query: 158 KVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEAVEYGLVDSILT 204 K+ + TG+ QI + + + + +A EA E+G D ++ Sbjct: 144 KIDAGLAGDYTRRTGKDQSQIVQWMDEETWFTADEAKEHGFADEVVE 190 >UniRef50_D1NE80 ATP-dependent Clp protease proteolytic subunit (Fragment) n=2 Tax=Haemophilus influenzae HK1212 RepID=D1NE80_HAEIN Length = 269 Score = 144 bits (364), Expect = 2e-33, Method: Composition-based stats. Identities = 73/111 (65%), Positives = 92/111 (82%) Query: 96 FIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHARE 155 FIKPD+ T+C+GQA SMGAFLL G GKR LPN+RVMIHQPLGG++GQA+DI+IHA+E Sbjct: 159 FIKPDIRTLCIGQACSMGAFLLAGGTAGKRAALPNARVMIHQPLGGFRGQASDIQIHAQE 218 Query: 156 ILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEAVEYGLVDSILTHR 206 ILK+K +N+ +A HTGQS+E+IE+DT+RD F+SA EA YGLVD +L R Sbjct: 219 ILKIKHTLNDRLAFHTGQSIERIEKDTDRDNFMSAEEAQAYGLVDEVLVKR 269 >UniRef50_UPI0001B52F96 putative Clp protease n=1 Tax=Fusobacterium sp. D11 RepID=UPI0001B52F96 Length = 370 Score = 144 bits (363), Expect = 2e-33, Method: Composition-based stats. Identities = 39/176 (22%), Positives = 74/176 (42%), Gaps = 9/176 (5%) Query: 36 RLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIYDTMQ 95 R+ + + + + ++ L+ + I L +NSPGG + +IY+ ++ Sbjct: 23 RIYGTITKWAWEEYGEVSSANFAKELQKLKNISH---INLRVNSPGGDVFEASAIYNLLK 79 Query: 96 FI----KPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEI 151 +++ G AAS +FL+ K + MIH PL G A ++ Sbjct: 80 DYAKVNNIEITGYIDGLAASAASFLVLCAT--KVIMGTGALYMIHNPLTSAYGNAEKLKK 137 Query: 152 HAREILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEAVEYGLVDSILTHRN 207 + VK + ++ + S E+I +++ A EA+E G VD I+ + N Sbjct: 138 QIELLDTVKEAILDIYCTKSKLSREEISEKMNGEKWYRASEALEAGFVDEIVENDN 193 >UniRef50_A8Z285 ATP-dependent Clp protease proteolytic subunit n=34 Tax=root RepID=A8Z285_STAAT Length = 257 Score = 143 bits (362), Expect = 2e-33, Method: Composition-based stats. Identities = 39/170 (22%), Positives = 74/170 (43%), Gaps = 7/170 (4%) Query: 39 KERVIFLTGQV--EDHMANLIVAQMLF--LEAENPEKDIYLYINSPGGVITAGMSIYDTM 94 + IF+ G + + + + A L+ +I ++INS GG + G +IY+ + Sbjct: 16 SKGEIFIYGDIVSDKWFESDVTATDFKNKLDELGDISEIDVHINSSGGSVFEGHAIYNML 75 Query: 95 QFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAR 154 + ++ AAS+ + + +G F NS +MIH G A ++ A Sbjct: 76 KMHPAKINIYVDALAASIASVIAMSG--DTIFMHKNSFLMIHNSWVMTVGNAEELRKTAD 133 Query: 155 EILKVKGRMNELMALHTG-QSLEQIERDTERDRFLSAPEAVEYGLVDSIL 203 + K N E +++ + + +L+A EA+ +GL+D IL Sbjct: 134 LLEKTDAVSNSAYLDKAKDLDQEHLKQMLDAETWLTAEEALSFGLIDEIL 183 >UniRef50_Q72BY3 ClpP protease family protein n=2 Tax=Desulfovibrio vulgaris RepID=Q72BY3_DESVH Length = 244 Score = 143 bits (362), Expect = 3e-33, Method: Composition-based stats. Identities = 43/173 (24%), Positives = 71/173 (41%), Gaps = 12/173 (6%) Query: 39 KERVIFLTGQVEDH------MANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIYD 92 +E I+L + A V ++ + I+L INSPGG + A + Sbjct: 27 EEATIYLYDVIVTDDYWGGVSAEAFVRELNAI----TASTIHLRINSPGGEVFAARCMEA 82 Query: 93 TMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIH 152 ++ V G AAS +F+ A P + +MIH+ G + D+ Sbjct: 83 AIKGHPAKVIAHVDGYAASAASFVAIAC--DDVLMAPGAFMMIHKAWVFTAGNSDDLIQT 140 Query: 153 AREILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEAVEYGLVDSILTH 205 A + K+ G + E + G+S+ + + + +A EAVE GL DSI Sbjct: 141 ASLLEKLDGTLAETYSQKCGKSVSDMAEMMAAETWFTAQEAVEAGLADSIEES 193 >UniRef50_C8VJ02 ATP-dependent Clp protease proteolytic subunit n=8 Tax=Leotiomyceta RepID=C8VJ02_EMENI Length = 135 Score = 143 bits (362), Expect = 3e-33, Method: Composition-based stats. Identities = 66/117 (56%), Positives = 87/117 (74%), Gaps = 4/117 (3%) Query: 94 MQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHA 153 M +I VSTIC+GQAASMG+ LL G G+R+CLP+S +MIHQP GGY GQATDI IHA Sbjct: 1 MTYIASPVSTICVGQAASMGSLLLCGGQAGQRYCLPHSSIMIHQPSGGYFGQATDIAIHA 60 Query: 154 REILKVKGRMNELMALH-TGQ---SLEQIERDTERDRFLSAPEAVEYGLVDSILTHR 206 +EIL+V+ ++N++ H TG+ SL++IE+ ERD F+ A EA+E G+VD IL R Sbjct: 61 KEILRVRHQLNQIYKRHLTGKKELSLDEIEKLMERDYFMGAREALELGIVDEILDRR 117 >UniRef50_A5V8D3 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Sphingomonas wittichii RW1 RepID=A5V8D3_SPHWW Length = 688 Score = 143 bits (361), Expect = 3e-33, Method: Composition-based stats. Identities = 41/161 (25%), Positives = 77/161 (47%), Gaps = 6/161 (3%) Query: 43 IFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIYDTM---QFIKP 99 I + G V D L ++ L + + D+ + INSPGG + G++IY+ + + Sbjct: 4 ILIYGIVGDSWDGLDANTIVPLISAGDD-DLDVRINSPGGYVMEGLAIYNAIIRERGKGR 62 Query: 100 DVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREILKV 159 V+T G AASMG+ L AG + N+ +MIH P G A ++ A + ++ Sbjct: 63 KVTTHIDGLAASMGSILAMAGE--EIVMADNALLMIHNPWDCACGDAIELRRAADRLDQL 120 Query: 160 KGRMNELMALHTGQSLEQIERDTERDRFLSAPEAVEYGLVD 200 + +M + + TG + + + + +++A EA+ + Sbjct: 121 RDQMVGIYSKATGLEADALIPMLDAETWMTATEALALNFIT 161 >UniRef50_A1VPI3 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Polaromonas naphthalenivorans CJ2 RepID=A1VPI3_POLNA Length = 674 Score = 142 bits (359), Expect = 6e-33, Method: Composition-based stats. Identities = 41/166 (24%), Positives = 75/166 (45%), Gaps = 5/166 (3%) Query: 43 IFLTGQVEDHMANLIVAQMLFLEAENPEKD--IYLYINSPGGVITAGMSIYDTMQFIKPD 100 I++ G + + V+ F++ N I + INS GG + G++IY+ ++ K + Sbjct: 30 IYIYGDIGESWYEETVSAATFVKELNDIDATAITVRINSIGGSVPDGLAIYNALRRHKAE 89 Query: 101 VSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREILKVK 160 V+ G A S+ + + AG K N+ +MIH P G + ++ A ++ Sbjct: 90 VTIEIDGMALSVASLIAMAG--DKVNMANNAMLMIHGPWSYVSGNSVELRDMADQLDTWA 147 Query: 161 GRMNELMALHTGQSLEQIERDTE-RDRFLSAPEAVEYGLVDSILTH 205 M+ A TG + T+ +D F +A +A+ VD+I Sbjct: 148 AAMSNSYAARTGDQPAMLALLTDGKDHFYTAEQALAEKFVDAITDP 193 >UniRef50_B8DAG3 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Listeria monocytogenes HCC23 RepID=B8DAG3_LISMH Length = 276 Score = 142 bits (359), Expect = 6e-33, Method: Composition-based stats. Identities = 42/170 (24%), Positives = 70/170 (41%), Gaps = 8/170 (4%) Query: 39 KERVIFLTGQV---EDHMANLIVAQMLF---LEAENPEKDIYLYINSPGGVITAGMSIYD 92 I + G + + F L+A IY+ INS GG + G +IY+ Sbjct: 18 NTAEIDIYGDIVADGYQWYESDITSFDFKKDLDALGDVSKIYVNINSNGGFVYEGQAIYN 77 Query: 93 TMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIH 152 + + G AAS+ + + AG N+++MIH+P GG G +D+E Sbjct: 78 QLVRHPAQIHVRIDGMAASIASVIAMAG--DIIEMPANAQMMIHEPAGGAFGNKSDLESA 135 Query: 153 AREILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEAVEYGLVDSI 202 R + K + HT + +IE ++++S EA E G + Sbjct: 136 IRALDASKQSIIAAYRTHTTLEVSEIESMMAEEKWMSGQEAYELGFATLV 185 >UniRef50_B5A4F3 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Gymnochlora stellata RepID=B5A4F3_GYMST Length = 216 Score = 142 bits (359), Expect = 6e-33, Method: Composition-based stats. Identities = 67/167 (40%), Positives = 108/167 (64%) Query: 37 LLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIYDTMQF 96 +L + ++FL G+V D +A+ I+ +++L K++ L INSPGG +T+G+++YD+ Sbjct: 49 MLNKEILFLYGEVNDTIADTIIKNIIYLNNTTTTKNLTLMINSPGGSVTSGLAMYDSFNL 108 Query: 97 IKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREI 156 + + T C+ AASMGAFLL +G KGKR + R+MIHQPLGG G IE A E+ Sbjct: 109 VDMHIGTTCIALAASMGAFLLGSGYKGKRNGFNHCRIMIHQPLGGIVGSFNQIESQANEL 168 Query: 157 LKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEAVEYGLVDSIL 203 L K +N ++ + Q+ ++ RD +RD F+S+ EA +YG++D++L Sbjct: 169 LYYKLVLNSYISNFSSQAPVKVMRDCDRDYFMSSREAAKYGIIDNVL 215 >UniRef50_UPI0001B43327 serine protease n=1 Tax=Listeria monocytogenes FSL N1-017 RepID=UPI0001B43327 Length = 235 Score = 142 bits (359), Expect = 6e-33, Method: Composition-based stats. Identities = 44/179 (24%), Positives = 76/179 (42%), Gaps = 8/179 (4%) Query: 35 SRLLKERVIFLTGQV-EDHMANLIVAQMLF---LEAENPEKDIYLYINSPGGVITAGMSI 90 S E I++ G++ F L+ + I L++NSPGG + G++I Sbjct: 10 SVAKNEAEIYIYGEIVSFKWDEEDTTASSFQKDLKELGNIETINLHVNSPGGNVFEGIAI 69 Query: 91 YDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIE 150 + ++ K V AAS+ + ++ K NS MIH P G +T++ Sbjct: 70 SNMIKAHKAKVIAYVDALAASIASVIVAGA--DKVVMYENSMQMIHNPTWNVSGNSTELR 127 Query: 151 IHAREILKVKGRMNELMALHTG--QSLEQIERDTERDRFLSAPEAVEYGLVDSILTHRN 207 HA ++ + G S E+I++ + +LSA +A+ +GL D IL Sbjct: 128 KHADDLDAIAQASVLTYLSKAGDKLSEEKIKQIMAEETWLSAKDALGHGLCDEILEANK 186 >UniRef50_B7JPB9 ATP-dependent Clp protease proteolytic subunit n=6 Tax=root RepID=B7JPB9_BACC0 Length = 247 Score = 142 bits (358), Expect = 8e-33, Method: Composition-based stats. Identities = 35/190 (18%), Positives = 73/190 (38%), Gaps = 5/190 (2%) Query: 19 MVIEQTSRGERSFDIYSRLLKERV-IFLTGQVEDHMANLIVAQMLFLEAENPE--KDIYL 75 M + + + + F++ + E +++ G + + ++ E K I + Sbjct: 1 MTVMEIPKIKNRFEVLNSANTEETDLYMYGSISAYSWYDGISSSKVREQLKNVTAKTINV 60 Query: 76 YINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMI 135 +INS GG + ++I + ++ + G AAS + + A K N+ +MI Sbjct: 61 HINSGGGDVFESIAISNLLKNHSATIVVHIDGLAASGASVIAMAA--DKIVMPKNTMMMI 118 Query: 136 HQPLGGYQGQATDIEIHAREILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEAVE 195 H+ G A + A + K+ + E ++E + +L+A E Sbjct: 119 HKAWTYAAGNAEGLRKVADRLDKIDNAVTESYTSRFVGEKSELESLLAEETWLTAEECKT 178 Query: 196 YGLVDSILTH 205 +G D I Sbjct: 179 FGFCDEISDE 188 >UniRef50_A4J7R2 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Desulfotomaculum reducens MI-1 RepID=A4J7R2_DESRM Length = 258 Score = 142 bits (358), Expect = 8e-33, Method: Composition-based stats. Identities = 33/164 (20%), Positives = 66/164 (40%), Gaps = 7/164 (4%) Query: 45 LTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIYDTMQFIKPDVSTI 104 + AN ++ K+I ++INS GG + G +IY ++ + Sbjct: 34 WDMVESETSANHFRNELAKY---PDVKEIKIFINSYGGSVFEGTAIYSQLRRHPAQKTVY 90 Query: 105 CMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREILKVKGRMN 164 G A S+ + + AG + N+ +MIH G AT + A ++ + Sbjct: 91 IDGFACSVASVIAMAG--DRVIMPKNTMMMIHNAWNIVAGNATQLRKAADDLDTIMAGNR 148 Query: 165 ELMALHTG--QSLEQIERDTERDRFLSAPEAVEYGLVDSILTHR 206 + + + E++ + + +L+A + +EYG D +L Sbjct: 149 QSYLQKSNGKITEEKLIELLDAETWLTAEQCIEYGFADELLEKD 192 >UniRef50_Q041N2 ATP-dependent Clp protease proteolytic subunit n=5 Tax=Bacteria RepID=Q041N2_LACGA Length = 223 Score = 142 bits (357), Expect = 9e-33, Method: Composition-based stats. Identities = 45/181 (24%), Positives = 82/181 (45%), Gaps = 4/181 (2%) Query: 29 RSFDIYSRLLKERVIFLTGQV--EDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITA 86 + F +S +RV+ + G + + + + + Q+ E + I L++NSPGG A Sbjct: 2 KRFWNWSGPQNQRVLTINGTIAEDSWVDDEVTPQVFQDELSQGKGPIDLWLNSPGGDCVA 61 Query: 87 GMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQA 146 IY + +V+ G AAS + + AG K +P + +MIH PL GQ Sbjct: 62 ASRIYTMLMNYPDNVNVKIDGIAASAASVIAMAGT--KVSMVPTAMIMIHNPLTIVGGQK 119 Query: 147 TDIEIHAREILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEAVEYGLVDSILTHR 206 D++ A+ + + K + L T E+I + + +++ +A+E G D +L Sbjct: 120 EDLDQAAQMLAETKESIINAYELKTNLPREKISSMMDDETWMNVNKAIELGFADDMLGQN 179 Query: 207 N 207 Sbjct: 180 K 180 >UniRef50_D0DKS7 ATP-dependent Clp protease proteolytic subunit n=6 Tax=root RepID=D0DKS7_9LACO Length = 241 Score = 142 bits (357), Expect = 1e-32, Method: Composition-based stats. Identities = 39/142 (27%), Positives = 70/142 (49%), Gaps = 2/142 (1%) Query: 66 AENPEKDIYLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKR 125 + +DI L INSPGG I AG +Y ++ +V+ +GQA S +++ A K Sbjct: 43 NDANGQDITLEINSPGGYIDAGSEMYTDLKKYPGNVTAQVVGQACSAASWIALAA--DKV 100 Query: 126 FCLPNSRVMIHQPLGGYQGQATDIEIHAREILKVKGRMNELMALHTGQSLEQIERDTERD 185 P +++MIH+ G +G D+ + + + +L + TG ++I R Sbjct: 101 EMSPTAQMMIHRVSVGVEGNVDDLTSALQSLDSMDQTYVDLYSKRTGLDKQEIYRMMCAT 160 Query: 186 RFLSAPEAVEYGLVDSILTHRN 207 +++A +AV+ G DSI+ + Sbjct: 161 TWMNAKQAVDKGFADSIMFEND 182 >UniRef50_D0J499 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Comamonas testosteroni CNB-2 RepID=D0J499_COMTE Length = 697 Score = 141 bits (356), Expect = 1e-32, Method: Composition-based stats. Identities = 38/167 (22%), Positives = 70/167 (41%), Gaps = 5/167 (2%) Query: 43 IFLTGQVEDHMANLIVAQMLFLEAEN--PEKDIYLYINSPGGVITAGMSIYDTMQFIKPD 100 I + G + + + + FL + I + INS GG + G++IY+ M+ K Sbjct: 30 ILIYGDIGESWWDETTSAKSFLAELSALDVDAITVRINSLGGSVPDGIAIYNAMKRHKAT 89 Query: 101 VSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREILKVK 160 ++ G A S+ + + G N+ +MIH P G + ++ A ++ Sbjct: 90 ITVEVDGIAYSIASLIAMGG--DTVNMASNALMMIHAPWTYAAGNSAELRELADQLDTWA 147 Query: 161 GRMNELMALHTGQSLEQIERDTE-RDRFLSAPEAVEYGLVDSILTHR 206 M+ A TG + T+ +D F +A EA+ +D+I Sbjct: 148 NAMSTSYAAKTGDQAGALALLTDGKDHFFTAEEALALKFIDAITDSN 194 >UniRef50_Q7P8G2 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Fusobacterium nucleatum subsp. vincentii ATCC 49256 RepID=Q7P8G2_FUSNV Length = 344 Score = 141 bits (356), Expect = 1e-32, Method: Composition-based stats. Identities = 44/168 (26%), Positives = 74/168 (44%), Gaps = 7/168 (4%) Query: 39 KERVIFLTGQVE--DHMANLIVAQMLFLEAEN---PEKDIYLYINSPGGVITAGMSIYDT 93 E I + GQ+ + A ++ E EN I LYINSPGG +T G +IY Sbjct: 12 NELNIQIYGQIGGFSWFDEPVSADQVYKELENFGNDIDTINLYINSPGGSVTEGCAIYSA 71 Query: 94 MQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHA 153 ++ K + GQ +S+ + + AG K P + +MIH P+ G A ++ A Sbjct: 72 LKRHKAVKNVYIDGQCSSIASVIAMAG--DKIAMSPVATMMIHNPITALAGDAIELRKTA 129 Query: 154 REILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEAVEYGLVDS 201 + +K + + S E+I + + + +A +A+E G Sbjct: 130 AILDIMKETIINAYVTKSHLSREEISALMDTETYFTADQAIEKGFATE 177 >UniRef50_B8ILU4 ATP-dependent Clp protease proteolytic subunit n=2 Tax=Proteobacteria RepID=B8ILU4_METNO Length = 237 Score = 141 bits (355), Expect = 2e-32, Method: Composition-based stats. Identities = 43/170 (25%), Positives = 74/170 (43%), Gaps = 9/170 (5%) Query: 39 KERVIFLTGQVEDH---MANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIYDTMQ 95 E +++ + + A V ++ +EA I+L +NSPGG + A ++ ++ Sbjct: 28 DEATVYVYDAIGSYYGIDAQTFVRELAAIEA----GTIHLRLNSPGGDVFAARAMKTALE 83 Query: 96 FIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHARE 155 K V G AAS +FL+ A + + VMIH+P G A ++ A Sbjct: 84 QHKAKVVAHIDGVAASAASFLMLAA--DEIAIADGAFVMIHEPWSLALGTADEMRASADL 141 Query: 156 ILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEAVEYGLVDSILTH 205 + KV + TG+S E++ + + + SA EA+E G D Sbjct: 142 LDKVGEAIAADYQRRTGKSAEEVAAWMKAETWFSADEAIENGFADRKAEK 191 >UniRef50_B7IY99 ATP-dependent Clp protease proteolytic subunit n=16 Tax=Bacillus cereus group RepID=B7IY99_BACC2 Length = 260 Score = 140 bits (354), Expect = 2e-32, Method: Composition-based stats. Identities = 36/177 (20%), Positives = 71/177 (40%), Gaps = 4/177 (2%) Query: 31 FDIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSI 90 D+ ++ +++ E A+ ++ + D+ + INSPGG + G I Sbjct: 5 IDVKGPIISNDEVWIYDWFEMDAASP--GKISKALEDANGDDLVVSINSPGGYVHEGSEI 62 Query: 91 YDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIE 150 Y ++ V +G AAS + + A K P +++MIH G D+ Sbjct: 63 YTALKNYPGHVEVQIVGLAASAASVIAMAA--DKVRISPTAQIMIHNASMWNGGDHRDMS 120 Query: 151 IHAREILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEAVEYGLVDSILTHRN 207 A + + + +G+S E++ + ++ +A+E VD I+ N Sbjct: 121 KAAEMLKTTDRAIVNAYVIKSGKSEEELLNMMAEETWMGPQQALENNFVDEIMFMDN 177 >UniRef50_B8D1N4 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Halothermothrix orenii H 168 RepID=B8D1N4_HALOH Length = 234 Score = 140 bits (354), Expect = 2e-32, Method: Composition-based stats. Identities = 42/170 (24%), Positives = 81/170 (47%), Gaps = 8/170 (4%) Query: 43 IFLTGQVEDHMANLIVAQMLFLEAENPE------KDIYLYINSPGGVITAGMSIYDTMQF 96 I+L G + + + + ++ L+ + I +++NS GG + ++I++ + Sbjct: 20 IYLHGPIRNPLPDEDEEDVITLKEVRNKLNKITADKIIVHLNSTGGDLFQSVAIHNLFKD 79 Query: 97 IKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREI 156 K ++ I G AAS G+ +L AG K PNS +MIH G A AR++ Sbjct: 80 HKAEIIMINDGIAASGGSIILMAG--DKIKFYPNSIMMIHAAHTITYGDAKYHREVARKL 137 Query: 157 LKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEAVEYGLVDSILTHR 206 K+ + E + + +++E+ + + +L+A EA E G D I++ Sbjct: 138 DKIDKSLKENYSQRFTGAEKELEKLIQEETWLTAKEAKEKGFCDEIISDN 187 >UniRef50_A7FXQ7 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Clostridium botulinum A str. ATCC 19397 RepID=A7FXQ7_CLOB1 Length = 247 Score = 140 bits (353), Expect = 3e-32, Method: Composition-based stats. Identities = 32/161 (19%), Positives = 66/161 (40%), Gaps = 6/161 (3%) Query: 44 FLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIYDTMQFIKPDVST 103 + + + A + + L +KD+ ++INS GG + ++I + ++ +++ Sbjct: 37 WWDDEDDCISAKRVKNALADL----RDKDVNIHINSGGGDVFESIAICNLLKQHGGNITI 92 Query: 104 ICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREILKVKGRM 163 AAS + + A K NS +MIH+ G A D+ A ++ K+ + Sbjct: 93 TIDALAASGASVICMAA--NKIVMPKNSMMMIHKAWTWTDGNADDLRKVAADLDKMDSAV 150 Query: 164 NELMALHTGQSLEQIERDTERDRFLSAPEAVEYGLVDSILT 204 + E+++ + + +A E G D IL Sbjct: 151 LASYKDRFIGTEEELKALIKESSWFTAEECKSLGFCDEILD 191 >UniRef50_UPI0001BC4FF2 peptidase S14, ClpP n=1 Tax=Fusobacterium ulcerans ATCC 49185 RepID=UPI0001BC4FF2 Length = 367 Score = 140 bits (352), Expect = 4e-32, Method: Composition-based stats. Identities = 40/183 (21%), Positives = 76/183 (41%), Gaps = 10/183 (5%) Query: 30 SFDIYSRLLKERVIFLTGQVEDHMANLI--VAQMLF---LEAENPEKDIYLYINSPGGVI 84 F I + E I ++G++ + ++F LE + + + INSPGG I Sbjct: 6 FFSIKNLSDDEGEIRISGEITRWAWEEFGQTSSLIFIKQLEKIKNARKVSIKINSPGGDI 65 Query: 85 TAGMSIYDTMQFIK--PDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGY 142 + ++IY ++ + +++ G A S + A K MIH P+ Sbjct: 66 SETLAIYHELKRLSQTKEITAYIDGMACSAATLIAIAAK--KTVMGKGCYFMIHNPMIYM 123 Query: 143 -QGQATDIEIHAREILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEAVEYGLVDS 201 +++ + K K M +L + S E I + + + + +A EA+E G +D Sbjct: 124 GYSNTGEMQEAIEHLNKTKENMIDLYEEKSSLSREDIAKKMDEETYFTAQEALEAGFIDE 183 Query: 202 ILT 204 I + Sbjct: 184 IAS 186 >UniRef50_A1WEU3 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Verminephrobacter eiseniae EF01-2 RepID=A1WEU3_VEREI Length = 229 Score = 139 bits (351), Expect = 5e-32, Method: Composition-based stats. Identities = 67/220 (30%), Positives = 103/220 (46%), Gaps = 35/220 (15%) Query: 22 EQTSRGERSFDIYSRLL----KERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYI 77 EQ E + ++L+ R +F+ G ++ MA V Q+ L + N + IY++I Sbjct: 4 EQKESTEPPGTMSAKLMEYAINARKVFIIGTIDHKMAKEAVQQLHILASINDD-PIYVFI 62 Query: 78 NSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQ 137 +SPGG + +G I+D ++FI P V + G AS GA + A K R+ LPN+ ++H Sbjct: 63 SSPGGHVESGDLIFDAIRFITPKVIVVSSGWVASAGALIYVAADKENRYSLPNTHFLLHM 122 Query: 138 ----PLGGYQGQATDIEIHARE--------------------------ILKVKGRMNELM 167 P G T + ARE ++ R+N + Sbjct: 123 KEIIPAGEMTYTETADDRAARERFAQFVSSSYRKKPPEPVNKSLHEYRTNVMRARLNRIF 182 Query: 168 ALHTGQSLEQIERDTERDRFLSAPEAVEYGLVDSILTHRN 207 A TGQ+LE+I DT D ++SA +AVEYGLV I+ Sbjct: 183 AEATGQTLEKITADTGHDFWMSAEQAVEYGLVHEIIVSEK 222 >UniRef50_UPI0001BC65FA prophage LambdaBa02, Clp protease family protein n=1 Tax=Fusobacterium gonidiaformans ATCC 25563 RepID=UPI0001BC65FA Length = 371 Score = 139 bits (351), Expect = 5e-32, Method: Composition-based stats. Identities = 34/176 (19%), Positives = 74/176 (42%), Gaps = 9/176 (5%) Query: 36 RLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIYDTMQ 95 R+ + +V + ++ ++ L+ + I L +NS GG + +I++ ++ Sbjct: 21 RIYGTITKWAWEEVGEVSSHSFAKELKNLKNISK---INLRVNSGGGDVFEANAIFNLLK 77 Query: 96 FI----KPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEI 151 ++ G AAS +FL+ K MIH P +G ++ Sbjct: 78 SYAKENNVEIIGYIDGLAASAASFLVLCAH--KVIMGVGCLFMIHNPWTYTKGNVKELGQ 135 Query: 152 HAREILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEAVEYGLVDSILTHRN 207 + K+K + ++ T + ++I + + +++ SA EA+E G VD + + Sbjct: 136 TIDFLNKIKESILDIYETKTKLTRQEISQKMDEEKWFSASEALESGFVDEMSEMED 191 >UniRef50_A1VKV0 ATP-dependent Clp protease proteolytic subunit n=2 Tax=Betaproteobacteria RepID=A1VKV0_POLNA Length = 641 Score = 139 bits (351), Expect = 6e-32, Method: Composition-based stats. Identities = 40/169 (23%), Positives = 76/169 (44%), Gaps = 8/169 (4%) Query: 38 LKERVIFLTGQVEDH-MANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIYDTMQF 96 + I + ++ A I +Q+ ++ + + + INS GG ++ ++IY+ ++ Sbjct: 1 MSTSKISIFSEIGSVVTAENIRSQLSYI---DDATPLIVEINSEGGSVSEAVAIYNLLRT 57 Query: 97 IKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREI 156 K V+ +G A S + AG + K S +M+H P G A + +A + Sbjct: 58 WKGGVTVEIVGWALSAATVIAMAGQRIKAHAT--SLIMVHAPWTNASGNAGAMRENAALL 115 Query: 157 LKVKGRMNELMALHTGQSLEQIERDTER-DRFLSAPEAVEYGLVDSILT 204 +V M A T Q + + + D + +A EA+ GLVD I++ Sbjct: 116 DQVALTMQAAYA-RTRQPAKTLAAWMDGQDHWFTAQEALALGLVDEIIS 163 >UniRef50_UPI0001C37221 ATP-dependent Clp protease, proteolytic subunit ClpP, putative n=1 Tax=Ruminococcus flavefaciens FD-1 RepID=UPI0001C37221 Length = 306 Score = 139 bits (350), Expect = 6e-32, Method: Composition-based stats. Identities = 48/177 (27%), Positives = 78/177 (44%), Gaps = 4/177 (2%) Query: 29 RSFDIYSRLLKERVIFLTGQVEDH--MANLIVAQMLFLEAENPEKDIYLYINSPGGVITA 86 + +D RV+ L G ++ + I Q E + D+ L+INSPGG + A Sbjct: 3 KFWDYIHDDSGGRVLRLEGPIDSDSFWGDEITPQDFRDELYAEDGDLTLWINSPGGNVFA 62 Query: 87 GMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQA 146 IY ++ +V+ AAS + + AG P + +MI+ P G A Sbjct: 63 AAEIYTMIRDYPHNVTVRIASIAASAASVIAMAG--NTVQMSPTALLMINDPSTIAFGNA 120 Query: 147 TDIEIHAREILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEAVEYGLVDSIL 203 D+E + +VK + A TG S +I + + +++A +AVE G D IL Sbjct: 121 KDMEKAIATLNEVKESIINAYAAKTGLSRNRISKLMSDETWINAKKAVELGFADEIL 177 >UniRef50_B2V4L4 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Clostridium botulinum E3 str. Alaska E43 RepID=B2V4L4_CLOBA Length = 263 Score = 139 bits (350), Expect = 6e-32, Method: Composition-based stats. Identities = 36/177 (20%), Positives = 73/177 (41%), Gaps = 9/177 (5%) Query: 33 IYSRLLKERVIFLTGQV--EDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSI 90 IY + + + + + AN ++ N I +++NS GG + M+I Sbjct: 21 IYGDVESDGYDWWWDETIESETSANHFKNELSKYSGINQ---INVFVNSYGGSVYEAMAI 77 Query: 91 YDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIE 150 + + +++ I G AAS +F+LT N+ MIH G A ++ Sbjct: 78 RNQLMRHSANITGIVDGFAASAASFILTGC--NYVKMYSNTMQMIHNMWMPACGNANELR 135 Query: 151 IHAREILKVKGRMNELMALHTG--QSLEQIERDTERDRFLSAPEAVEYGLVDSILTH 205 A ++ K+ + + + E + E + +L+A + ++YGL D ++ Sbjct: 136 KSADDLDKIMEGNRQAYLQKSNGKLTEEILIELLENETWLTAEDCLKYGLCDEVIEE 192 >UniRef50_Q892G9 ATP-dependent Clp protease proteolytic subunit n=2 Tax=root RepID=Q892G9_CLOTE Length = 226 Score = 139 bits (350), Expect = 6e-32, Method: Composition-based stats. Identities = 38/165 (23%), Positives = 74/165 (44%), Gaps = 5/165 (3%) Query: 39 KERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIYDTMQFIK 98 ++ I+ ++ + + L + + + INS GG + AG IY ++ K Sbjct: 13 DDQWIYDWFGIDATSPKKVQNE---LSNSKNNEGLEVEINSGGGSVFAGSEIYTLLKDYK 69 Query: 99 PDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREILK 158 +V+ +G AAS + + AG K P ++MIH G + G ++E + + Sbjct: 70 GNVTVKIVGLAASAASVIAMAG--DKVLISPTGQIMIHNASGCFSGDYRNMEKGSEILKN 127 Query: 159 VKGRMNELMALHTGQSLEQIERDTERDRFLSAPEAVEYGLVDSIL 203 V ++ L TG S E++ ++ +L+ A++ VD I+ Sbjct: 128 VNITISNAYKLKTGLSSEELLDMMNKETWLTPQNALDNKFVDEIM 172 >UniRef50_B9QT01 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Labrenzia alexandrii DFL-11 RepID=B9QT01_9RHOB Length = 342 Score = 138 bits (349), Expect = 8e-32, Method: Composition-based stats. Identities = 38/168 (22%), Positives = 71/168 (42%), Gaps = 5/168 (2%) Query: 37 LLKERVIFLTGQVEDH-MANLIVAQ--MLFLEAENPEKDIYLYINSPGGVITAGMSIYDT 93 + + + L G V ++ A+ + L + D+ + +NS GG + G SIY+ Sbjct: 3 VYENGELVLYGFVGENLWDEGFTAREVITALAEHGSQNDLTVRLNSGGGYVDDGRSIYNA 62 Query: 94 MQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHA 153 ++ DV+ G AAS + + AG K + +MIH P G A D ++ Sbjct: 63 LKVHGGDVTVFVDGVAASSASLIAMAG--DKIVMRSGALMMIHDPATITVGTADDHDVSK 120 Query: 154 REILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEAVEYGLVDS 201 + + + + A +G + + + +++A EAV G D Sbjct: 121 QALERTAESFADTYAARSGNDAKDVRAAMKATTWMTADEAVAAGYADE 168 >UniRef50_UPI0001B44862 Clp protease domain protein n=3 Tax=Listeria monocytogenes RepID=UPI0001B44862 Length = 265 Score = 138 bits (347), Expect = 1e-31, Method: Composition-based stats. Identities = 40/169 (23%), Positives = 76/169 (44%), Gaps = 7/169 (4%) Query: 39 KERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIYDTMQFIK 98 ++ I+ +E A I + N ++ ++INS GG + AG IY ++ Sbjct: 14 DDKWIYDWLDMEATCAKDINEALA-----NASGEVEVWINSNGGDVFAGSEIYTALKSYN 68 Query: 99 PDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREILK 158 +V +G AAS + + AG + P ++MIH G +G +++ + Sbjct: 69 GNVVVKIVGMAASAASVIAMAG--NEVLISPTGQMMIHNVQYGGRGDYRELKKASEIAQN 126 Query: 159 VKGRMNELMALHTGQSLEQIERDTERDRFLSAPEAVEYGLVDSILTHRN 207 + L TG++LE++ + +L++ +AVE GL D ++ N Sbjct: 127 ANISIANAYQLKTGKTLEELLNMMGEETWLNSQQAVELGLADGVMFQEN 175 >UniRef50_C1FD32 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Micromonas sp. RCC299 RepID=C1FD32_9CHLO Length = 247 Score = 138 bits (347), Expect = 2e-31, Method: Composition-based stats. Identities = 52/154 (33%), Positives = 87/154 (56%), Gaps = 3/154 (1%) Query: 53 MANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIYDTMQFIKPD---VSTICMGQA 109 +A + A++L L E+P+KDI L++N+ G +I D M++I+ +S + MG Sbjct: 85 VATRVCAELLALSYEDPDKDIRLFVNATAGTQYCVQTILDMMEYIQSKGVDISVVGMGCV 144 Query: 110 ASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREILKVKGRMNELMAL 169 A A LL AG KGKR +P+ R+++ QPLGG G + ++ I A+E+ + + A Sbjct: 145 AGPPAMLLAAGTKGKRLAMPSCRIILSQPLGGLSGTSYEVRIQAKELSRNARMQVAVFAK 204 Query: 170 HTGQSLEQIERDTERDRFLSAPEAVEYGLVDSIL 203 TG+S + + RD ++S EA E L+D ++ Sbjct: 205 FTGKSFDDMGEYLVRDTYMSPQEAKELNLIDGVI 238 >UniRef50_B2KDB1 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Elusimicrobium minutum Pei191 RepID=B2KDB1_ELUMP Length = 355 Score = 137 bits (345), Expect = 2e-31, Method: Composition-based stats. Identities = 61/171 (35%), Positives = 92/171 (53%), Gaps = 7/171 (4%) Query: 41 RVIFLTGQVEDHMANLIVAQMLFL-EAENPEKDIYLYINSPGGVITAGMSIYDTMQFIKP 99 R I++T + A IVAQ+ + E + I +Y+N GG TA +I D M Sbjct: 3 REIYITADISKETATDIVAQIKAMSEGIGANQPIKMYVNCFGGSATAMFTILDAMATCPC 62 Query: 100 DVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQA---TDIEIHAREI 156 ++ T+ +G+A S A + +AG+ KRF NSRVMIH+ A + IE +E Sbjct: 63 EIITVNLGEADSAAALIFSAGS--KRFITENSRVMIHEVRLSTLYSAEPLSQIEAELKEF 120 Query: 157 LKVKGRMNELMALHTGQSLEQIERDT-ERDRFLSAPEAVEYGLVDSILTHR 206 + M + +A +TG+ E+I+ D +D +LSA EA+EYGL D+ILT Sbjct: 121 QILNDNMFKALAKNTGKKPEEIKADVFGKDLYLSAEEAIEYGLADAILTTE 171 >UniRef50_A3X5R0 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Roseobacter sp. MED193 RepID=A3X5R0_9RHOB Length = 326 Score = 137 bits (345), Expect = 3e-31, Method: Composition-based stats. Identities = 43/180 (23%), Positives = 83/180 (46%), Gaps = 8/180 (4%) Query: 30 SFDIYSRLLKERVIFLTGQVEDH--MANLIVAQMLFLEAENPEKDIYLYINSPGGVITAG 87 + I +R + + ++ + A +A++ L + I L +NSPGG + Sbjct: 4 WYTIRARTSGT-EVLIYDEIGAYGVTAKGFLAELGVL---PEDAAIDLRLNSPGGSVFDA 59 Query: 88 MSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQAT 147 ++IY+ ++ +++ G AAS +++ AG N+ +MIH P G G A Sbjct: 60 VAIYNALKRHAGEITVWIDGIAASAASYIAMAGDA--IVMPENAFLMIHDPSGLVMGTAE 117 Query: 148 DIEIHAREILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEAVEYGLVDSILTHRN 207 D+ A + KVKG + + A +G+ ++I + +L A +A++ G +D I Sbjct: 118 DMRATAEALDKVKGSLIQGYAGKSGKPDDEIAALMAAETWLDAKDALDLGFIDRIAEPVK 177 >UniRef50_C8RQH1 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Corynebacterium jeikeium ATCC 43734 RepID=C8RQH1_CORJE Length = 473 Score = 136 bits (344), Expect = 4e-31, Method: Composition-based stats. Identities = 36/173 (20%), Positives = 74/173 (42%), Gaps = 14/173 (8%) Query: 43 IFLTGQVEDH--------MANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIYDTM 94 I + G + A ++AQ+ + D+ + I+S GG + G+ I + Sbjct: 4 ILMYGPIGPDFWEPENAITAKSVMAQLSEI-----SGDVTVRISSGGGDVYEGVDIMTAL 58 Query: 95 QFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAR 154 + +V+ I AAS +F+ GA + +S +M+H+ +G A D+ Sbjct: 59 KNHDGEVTVIVESLAASAASFIAVGGA-DRVLMRKSSEMMLHRAWTLAEGNADDVRKTLG 117 Query: 155 EILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEAVEYGLVDSILTHRN 207 ++ + ++ + A G ++ + + +A EAV GL D I+ ++ Sbjct: 118 DLERQDNKLAAIYAGKAGGEVQDWLDAMSAETWYTAEEAVAAGLADGIVAEKS 170 >UniRef50_B1MZD0 ATP-dependent Clp protease proteolytic subunit n=4 Tax=root RepID=B1MZD0_LEUCK Length = 229 Score = 136 bits (343), Expect = 5e-31, Method: Composition-based stats. Identities = 39/170 (22%), Positives = 75/170 (44%), Gaps = 12/170 (7%) Query: 45 LTGQVEDHMANLIVAQMLFLEAENPEK----------DIYLYINSPGGVITAGMSIYDTM 94 + G + ++ I Q L A +P D+ + INS GG + A IY + Sbjct: 5 IKGIITNNDDVEIYRQGLGYAATSPSDILANLPTDGSDLEIGINSGGGEVDAANEIYTAL 64 Query: 95 QFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAR 154 + V T A S + + AG K P +++MIH G D++ + Sbjct: 65 RNYPGKVITQIESSAYSAASIIAMAG--DKVQISPVAQLMIHNASTYAGGNHNDLDKTSN 122 Query: 155 EILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEAVEYGLVDSILT 204 + + + ++ TG+ +E+ +++ +++A +A+E GLVD ++T Sbjct: 123 ALKSTDKAIAKAYSVKTGRPVEEFLALMDKETWINADDALELGLVDEVMT 172 >UniRef50_A3LLS6 Putative uncharacterized protein n=1 Tax=Pseudomonas aeruginosa 2192 RepID=A3LLS6_PSEAE Length = 390 Score = 135 bits (341), Expect = 6e-31, Method: Composition-based stats. Identities = 28/166 (16%), Positives = 69/166 (41%), Gaps = 7/166 (4%) Query: 41 RVIFLTGQVEDH--MANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIYDTMQFIK 98 I++ G++ + + + ++ + + ++ ++ GG + G++I++ ++ + Sbjct: 60 IEIYIYGEIGFWGITSADFIRDLKAVD--DGTSPVLVHFDTIGGDLFDGIAIHNALRALG 117 Query: 99 PDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREILK 158 + G S G+ + + N+ MIH P G + D+ A + + Sbjct: 118 ERCTARIDGACFSAGSVAACGAHRVE--MADNALFMIHNPWTLAAGDSEDLRKVADMMDQ 175 Query: 159 VKGRMNELMALHT-GQSLEQIERDTERDRFLSAPEAVEYGLVDSIL 203 + T ++ R + + +L+APEA + G VD +L Sbjct: 176 AFEGIVASYQHRTLNVDDAELRRMIDDETWLTAPEAKDKGFVDEVL 221 >UniRef50_Q3RAG5 ATP-dependent Clp protease proteolytic subunit n=4 Tax=Xylella fastidiosa RepID=Q3RAG5_XYLFA Length = 771 Score = 135 bits (341), Expect = 8e-31, Method: Composition-based stats. Identities = 45/188 (23%), Positives = 79/188 (42%), Gaps = 7/188 (3%) Query: 21 IEQTSRGERSFDIYSRLLKERVIFLTGQVEDHMANL--IVAQMLFLEAENPEKDIYLYIN 78 + +R +++ K+ + L G + D A ++ + I++ IN Sbjct: 23 MPPQARPPSVVALHNSNPKQAELLLYGPIGDDFWEEGVTAASLIAQLSTVTAPLIHVRIN 82 Query: 79 SPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQP 138 S GGV++ G++IY+ + + G AAS+ + + AG R PNS +MIH P Sbjct: 83 SNGGVVSDGLAIYNALTAHPATIHVTIDGVAASIASLIAQAGTT--RRVYPNSLMMIHGP 140 Query: 139 LGGYQGQATDIEIHAREILKVKGRMNELMALHTGQSLEQIERDTER--DRFLSAPEAVEY 196 G A D+ A + + M+ E I R D +L+A + + Sbjct: 141 QTSGWGFAEDLRHTAAMLDTMAAAMHTAYTTGATHP-EAIRRMLNDGHDHWLTAQDMIAA 199 Query: 197 GLVDSILT 204 GL D+I+ Sbjct: 200 GLADTIID 207 >UniRef50_A5Z441 Putative uncharacterized protein n=1 Tax=Eubacterium ventriosum ATCC 27560 RepID=A5Z441_9FIRM Length = 385 Score = 135 bits (341), Expect = 8e-31, Method: Composition-based stats. Identities = 42/184 (22%), Positives = 78/184 (42%), Gaps = 10/184 (5%) Query: 28 ERSFD-IYSRLLKERVIFLTGQVEDHM--ANLIVAQML--FLEAENPEKDIYLYINSPGG 82 +R ++ + + L G++ ++ + I + L+ +I + INS GG Sbjct: 17 QRFWNFVPDEERNTAEMLLYGEISEYSWYGDEITPSVFNQELKDLGAVDEITVRINSGGG 76 Query: 83 VITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGY 142 + A ++IY ++ K +S G AS + AG + MIH PL G Sbjct: 77 DVFAAVAIYTRLKEHKAKISVKIDGWCASAATIIAMAGDTIEISV--GGVFMIHDPLAGL 134 Query: 143 QG--QATDIEIHAREILKVKGRMNELMALHTGQSLEQIERDTERD-RFLSAPEAVEYGLV 199 G TD+E +E+ +K + T +S E+I+ + + + EAVE G Sbjct: 135 IGYYNTTDLENIVKELETIKQSIVNCYMTVTDKSEEEIKSLMTNEGEWFTGEEAVEAGFC 194 Query: 200 DSIL 203 +++ Sbjct: 195 TAVM 198 >UniRef50_Q3EL78 ATP-dependent Clp protease proteolytic subunit n=3 Tax=Bacillus cereus group RepID=Q3EL78_BACTI Length = 244 Score = 135 bits (340), Expect = 8e-31, Method: Composition-based stats. Identities = 36/177 (20%), Positives = 81/177 (45%), Gaps = 11/177 (6%) Query: 29 RSFDIYSRLLKERVIFLTGQV-----EDHMANLIVAQMLF--LEAENPEKDIYLYINSPG 81 F I ++ +F+ G + + ++ + L + + ++ +Y+NS G Sbjct: 14 DVFTIKNQTDSSADLFIYGDIINNTGWKWDDSDVMPDDVKNILGQLDDKSNLNIYVNSGG 73 Query: 82 GVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGG 141 G + AG++IY+ ++ K + G AAS+ + + AG + N+ +M+H+P Sbjct: 74 GSVFAGLAIYNMLKRNKAQKTVYVDGVAASIASVIALAG--DRVVVPSNAFLMVHKPWTV 131 Query: 142 YQGQATDIEIHAREILKVKGRMNELMAL--HTGQSLEQIERDTERDRFLSAPEAVEY 196 +G A + A ++ ++ + + G +E I++ + + +LS EA +Y Sbjct: 132 SRGNANVLRKMAEDLDNLEAGIMNVYKENLKEGIEMEVIQQLVDAETWLSGEEAEKY 188 >UniRef50_Q88IF4 ATP-dependent Clp protease proteolytic subunit n=6 Tax=Pseudomonas RepID=Q88IF4_PSEPK Length = 387 Score = 135 bits (340), Expect = 9e-31, Method: Composition-based stats. Identities = 33/184 (17%), Positives = 70/184 (38%), Gaps = 12/184 (6%) Query: 27 GERSFDIYSRLLKE-----RVIFLTGQVEDH--MANLIVAQMLFLEAENPEKDIYLYINS 79 + I + + +++ G++ AN + + ++ + I + N+ Sbjct: 21 DRHWYSIAAATEGDADSKVIEVYVYGEIGAWGITANQFIQDLKAID--DGTSPIVVAFNT 78 Query: 80 PGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPL 139 GG + G++I++ + + + AAS G+ + + N+ +MIH P Sbjct: 79 NGGDLFEGLAIHNALSRLGERCTGRVDALAASAGSVAVCGAH--RVVMASNAMLMIHNPY 136 Query: 140 GGYQGQATDIEIHAREILKVKGRMNELMALHT-GQSLEQIERDTERDRFLSAPEAVEYGL 198 G A D+ A + + M ++ R + +L+A EAV GL Sbjct: 137 TWVGGDAEDLRRVADVLDQAFEAMIAAYKAKAPNIDDAELRRLVNAESWLTASEAVALGL 196 Query: 199 VDSI 202 D + Sbjct: 197 ADEV 200 >UniRef50_A5ZPL9 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Ruminococcus obeum ATCC 29174 RepID=A5ZPL9_9FIRM Length = 223 Score = 135 bits (339), Expect = 1e-30, Method: Composition-based stats. Identities = 41/176 (23%), Positives = 83/176 (47%), Gaps = 10/176 (5%) Query: 32 DIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIY 91 DI S ++ I+ +++ + L + +++I + +NS GG + AG IY Sbjct: 9 DIISN--DDKWIYDWFEMDATCPRDVTDI---LNSAAVDEEIEVLVNSGGGSVMAGQEIY 63 Query: 92 DTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPL-GGYQGQATDIE 150 ++ K +V A S + AG K P + +MIH G G D++ Sbjct: 64 SALKQ-KKNVVIKIQSMAGSAAGVIAMAG---KCQMSPVAMIMIHNVSMSGASGDYHDMQ 119 Query: 151 IHAREILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEAVEYGLVDSILTHR 206 +A + ++ + +G+SL++I + +R+ +L+A + ++YG VD I++ + Sbjct: 120 KNAEILKQMNSALAAAYTEKSGRSLDEILKLMDRETWLTANQCLDYGFVDEIMSEQ 175 >UniRef50_C9ZCK7 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Streptomyces scabiei 87.22 RepID=C9ZCK7_STRSW Length = 165 Score = 135 bits (339), Expect = 1e-30, Method: Composition-based stats. Identities = 57/127 (44%), Positives = 75/127 (59%), Gaps = 2/127 (1%) Query: 83 VITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLG-- 140 +TA ++YDT +F+ DV T+C GQA S A L AG GKR LP +R +IHQP Sbjct: 25 TLTAMTALYDTNRFVTCDVETVCPGQAGSAAAVLPAAGTPGKRSMLPGARALIHQPAMAD 84 Query: 141 GYQGQATDIEIHAREILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEAVEYGLVD 200 +GQA D I A E+ + + M E++ HTG+S E+I D ERD FL A AV YGL D Sbjct: 85 PVEGQAGDPAIRAEELTRHRRTMEEMLVRHTGRSPERIGADIERDTFLDAEAAVAYGLAD 144 Query: 201 SILTHRN 207 ++ R Sbjct: 145 RVVQSRR 151 >UniRef50_C4FX34 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Catonella morbi ATCC 51271 RepID=C4FX34_9FIRM Length = 250 Score = 135 bits (339), Expect = 1e-30, Method: Composition-based stats. Identities = 36/151 (23%), Positives = 68/151 (45%), Gaps = 2/151 (1%) Query: 52 HMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAAS 111 + + A+++ E +K I + +NSPGG + G+ IY+ ++ V+ G AAS Sbjct: 34 TDDDAVSAKLVRDSLEGVDKPILIKLNSPGGDVFEGIEIYNYLKNHNQSVTVEITGVAAS 93 Query: 112 MGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREILKVKGRMNELMALHT 171 + + K + +MIH+ G TDI+ + + + + A T Sbjct: 94 AASIIAMGA--DKIIMNTGTTLMIHEASSFAFGNKTDIQKVLNALETIDASLVAIYAERT 151 Query: 172 GQSLEQIERDTERDRFLSAPEAVEYGLVDSI 202 G ++I+ + +L+A EAV+ G D + Sbjct: 152 GIDTDEIKDLLNAETWLTAEEAVDKGFADEV 182 >UniRef50_B3EUB4 Peptidase S14 ClpP n=1 Tax=Candidatus Amoebophilus asiaticus 5a2 RepID=B3EUB4_AMOA5 Length = 455 Score = 134 bits (338), Expect = 2e-30, Method: Composition-based stats. Identities = 47/179 (26%), Positives = 83/179 (46%), Gaps = 8/179 (4%) Query: 35 SRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYI-NSPGGVITAGMSIYDT 93 + +L +R + L G V AN I ++ + ++ K I++ I NSPGG AG+ I Sbjct: 217 TLVLSDRAVSLDGVVTSWKANYITDRIKYFNNKDKTKPIFIVIENSPGGSALAGLHIVQA 276 Query: 94 MQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHA 153 MQ + V + AASM A + T K + PN+ ++ HQP G +++ Sbjct: 277 MQNSQAPVYVVLKTFAASMAALITTLAK--KSYAYPNAILLHHQPWSFTGGNLRELKEEI 334 Query: 154 REILKVKGRMNELMALHTGQSLEQIERDT-----ERDRFLSAPEAVEYGLVDSILTHRN 207 + ++ R+ +A G SL+++++ D A A + VD ++T+ N Sbjct: 335 EFMKELWKRLGGQVAKKMGISLDKLDKQLYEKASRGDWTEFADNAKKIKWVDHVITNIN 393 >UniRef50_Q4UBQ0 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Theileria annulata RepID=Q4UBQ0_THEAN Length = 261 Score = 134 bits (337), Expect = 2e-30, Method: Composition-based stats. Identities = 52/168 (30%), Positives = 90/168 (53%), Gaps = 10/168 (5%) Query: 50 EDHMANLIVAQMLFLEAENPEKDIYLYINSPG---------GVITAGMSIYDTMQFIKPD 100 +A+L+++Q+L+L+ ++ +K I +YINS ++I D M ++K + Sbjct: 94 NSGVAHLVISQLLYLDYDSQDKPIKIYINSDNERSNEDGISTSEIDALNIVDVMNYLKNE 153 Query: 101 VSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQ-PLGGYQGQATDIEIHAREILKV 159 V TI +G+A A +L +G GKR+ LP S ++ Q P QA DI I++REILK Sbjct: 154 VITINLGKAYGPAALILASGTPGKRYVLPRSYTLLRQSPTTLSFRQAEDIAIYSREILKA 213 Query: 160 KGRMNELMALHTGQSLEQIERDTERDRFLSAPEAVEYGLVDSILTHRN 207 + + ++ + +S E+I ++ + E V +GL D IL + N Sbjct: 214 RRSVIKVFSKACNKSEEEILEKINVGDYMGSQETVNFGLADKILENIN 261 >UniRef50_A9APU6 ATP-dependent Clp protease proteolytic subunit n=8 Tax=root RepID=A9APU6_BURM1 Length = 280 Score = 133 bits (336), Expect = 3e-30, Method: Composition-based stats. Identities = 39/169 (23%), Positives = 70/169 (41%), Gaps = 12/169 (7%) Query: 43 IFLTGQVEDHM------ANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIYDTMQF 96 I + + D+ A I A + + +++ + +NSPGG G++IY+ ++ Sbjct: 45 ISIYDSIGDNWEGTGVTAKRISAALRNI----GAREVTVNVNSPGGDFFEGVAIYNLLRE 100 Query: 97 IKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREI 156 K V+ MG AAS + + AG + + +MIH G D+ A + Sbjct: 101 HKAKVTVNVMGLAASAASVIAMAG--DEILMGDGAFLMIHNAWAVAIGNRHDMAAAAATL 158 Query: 157 LKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEAVEYGLVDSILTH 205 M +L A G S E +++ ++ A +AV+ G L Sbjct: 159 APFDAAMAKLYAQRAGISEETAAAMMDKETWIGADQAVKDGFATGKLDS 207 >UniRef50_C4WDN9 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Staphylococcus warneri L37603 RepID=C4WDN9_STAWA Length = 258 Score = 133 bits (336), Expect = 3e-30, Method: Composition-based stats. Identities = 34/178 (19%), Positives = 74/178 (41%), Gaps = 11/178 (6%) Query: 31 FDIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSI 90 DIY + + + + L+A ++ + INS GG + +G++I Sbjct: 6 IDIYGFIDSQTI--EGMTISPQTVRE------QLKAMGDVDEVVVNINSNGGDVFSGVTI 57 Query: 91 YDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIE 150 Y+ ++ ++ G AAS+ + + AG N+ +M+H +G A + Sbjct: 58 YNMLRRFDAHITVNVDGLAASIASVIAMAG--DTINMPGNAMLMVHNAWTVNEGDARSFK 115 Query: 151 IHAREILKVKGRMNELMALHTGQSLEQIERD-TERDRFLSAPEAVEYGLVDSILTHRN 207 A ++ ++ + + +D + + +L+A EA + GL+D+I + Sbjct: 116 KRAEDLERINSVVFNSYVDKNPDIDHALLQDYMDEETWLTAKEAKKLGLIDNITENSR 173 >UniRef50_A7GI71 ATP-dependent Clp protease proteolytic subunit n=15 Tax=Firmicutes RepID=A7GI71_CLOBL Length = 266 Score = 133 bits (336), Expect = 3e-30, Method: Composition-based stats. Identities = 35/175 (20%), Positives = 78/175 (44%), Gaps = 11/175 (6%) Query: 31 FDIYSRLLKERVIFLTGQVEDHM-----ANLIVAQML--FLEAENPEKDIYLYINSPGGV 83 +I ++ ++ ++ G + Q + FL+ + K++ +YINS GG Sbjct: 23 MEIKNQTEEKAELYFYGDICSSTWGCWEEEDKCPQDVSNFLKEIDNNKELDIYINSGGGS 82 Query: 84 ITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQ 143 + AG++IY ++ + G AAS+ + + G K ++ MIH+P Sbjct: 83 VFAGLAIYHQLKRHNGFKTVHVDGLAASITSVIALVG--DKVVIPAPAQFMIHKPWTIAL 140 Query: 144 GQATDIEIHAREILKVKGRMNELMAL--HTGQSLEQIERDTERDRFLSAPEAVEY 196 G A + A ++ + + ++ + G ++E I++ + +++ +A EY Sbjct: 141 GNANEFRKQANDLDIAEESILKIYEANLNEGVNIETIKQLMADETWMTGEKAAEY 195 >UniRef50_Q2K642 Probable Clp protease protein n=1 Tax=Rhizobium etli CFN 42 RepID=Q2K642_RHIEC Length = 694 Score = 133 bits (335), Expect = 3e-30, Method: Composition-based stats. Identities = 44/209 (21%), Positives = 84/209 (40%), Gaps = 15/209 (7%) Query: 5 GERDNFAPHMALVPMVIEQTSRGERSFDIYSRLLKERVIFLTGQVEDH--------MANL 56 G F P L + + R S+L+ + + L G V ++ Sbjct: 6 GGSGKFWPRDRLFVAKLSDNPQVNRIEAGMSKLIVDGELMLYGPVGFTDFWDESGFTSSQ 65 Query: 57 IVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFL 116 ++ + L D+ + +NS GG+ G +I++ ++ V AAS + + Sbjct: 66 VIEALSAL-----SGDVVVRLNSGGGIAMEGSAIHNALKRHDGKVIVKIDAIAASAASLI 120 Query: 117 LTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREILKVKGRMNELMALHTGQSLE 176 AG + + +MIH+P G G A D A + + G ++ A TG S + Sbjct: 121 AMAG--DEIEMPLGTLLMIHEPSGMTLGPADDHRRTAGVLDTMTGVFAQVYAERTGLSEK 178 Query: 177 QIERDTERDRFLSAPEAVEYGLVDSILTH 205 +I + + + +++ EA+ G S+ H Sbjct: 179 EIRQMMKDETWMAPQEALANGFATSVSEH 207 >UniRef50_C2PNQ2 ATP-dependent Clp protease proteolytic subunit n=2 Tax=Bacillus cereus RepID=C2PNQ2_BACCE Length = 241 Score = 133 bits (335), Expect = 3e-30, Method: Composition-based stats. Identities = 39/169 (23%), Positives = 69/169 (40%), Gaps = 4/169 (2%) Query: 39 KERVIFLTGQVEDHMANLIVAQ--MLFLEAENPEKDIYLYINSPGGVITAGMSIYDTMQF 96 E I++ G + + V+ + + + DI+LYINS GG + G+SIY+ ++ Sbjct: 20 GENDIYVYGTIGESWWEESVSANAIKRKLSNVKDGDIHLYINSFGGSVFDGISIYNQLKR 79 Query: 97 IKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREI 156 V G AAS + + AG + NS +M+H+ G E + Sbjct: 80 HSSKVIVHVDGIAASAASLIAMAG--DEIIMPANSMLMVHRASTFAWGNREVFEQQLNAL 137 Query: 157 LKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEAVEYGLVDSILTH 205 K+ + ++E + + +L+A E +GL D I Sbjct: 138 DKIDQSVTNTYMKRFVGERSEMEELLKNETWLTAEECKAFGLCDEIADE 186 >UniRef50_B1RAB0 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Clostridium perfringens B str. ATCC 3626 RepID=B1RAB0_CLOPE Length = 255 Score = 133 bits (335), Expect = 3e-30, Method: Composition-based stats. Identities = 42/192 (21%), Positives = 83/192 (43%), Gaps = 13/192 (6%) Query: 27 GERSFDIYSRLLK--ERVIFLTGQVEDH----MANLIVAQMLFLEAENPEKDIYLYINSP 80 G++ ++I ++ E I+L ++ A+ + LE+ + +YINSP Sbjct: 2 GKKFWEIKAKANNPSEADIYLYIEIASWGGGYCAHSAQSFTEELESLGDISTLNVYINSP 61 Query: 81 GGVITAGMSIYDTMQFI--KPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQP 138 GG + G +I++ ++ ++ G AAS+ + + AG N+ +MIH+ Sbjct: 62 GGDVFEGYAIFNVLRRKADNCQINVYIDGMAASIASVIAMAGT--HISMPSNAVMMIHRA 119 Query: 139 LGGYQGQATDIEIHAREILKVKGRMNELMALHTGQSLEQIERD---TERDRFLSAPEAVE 195 G G + + + + K+ M + + L+ D + D +L+A E +E Sbjct: 120 SIGIYGNSDVLAKGIKFLEKIDNNMKQTYINRSNGKLDDSTLDFLFSNGDTWLTAQECLE 179 Query: 196 YGLVDSILTHRN 207 YGL D + Sbjct: 180 YGLCDEVTEEIK 191 >UniRef50_C3WBA5 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Fusobacterium mortiferum ATCC 9817 RepID=C3WBA5_FUSMR Length = 361 Score = 133 bits (334), Expect = 5e-30, Method: Composition-based stats. Identities = 36/175 (20%), Positives = 69/175 (39%), Gaps = 8/175 (4%) Query: 36 RLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIYDTMQ 95 R+ + + + + + Q+ L+ K + L INSPGG + +++Y ++ Sbjct: 22 RVYGDICKWAWEEYGETSSVTFSKQLANLKN---VKKLELKINSPGGDVFEAVAMYHEIK 78 Query: 96 FI--KPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGY-QGQATDIEIH 152 +V+ G AAS L A K MIH PL ++ Sbjct: 79 RFAQGKEVTAYIDGMAASAATILTLAA--NKTIMGKGCYFMIHNPLMYMGYANVEEMNEA 136 Query: 153 AREILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEAVEYGLVDSILTHRN 207 + K K + +L S ++I ++ + +A EA++ G +D I + + Sbjct: 137 IEHLNKTKDNLLDLYEEKCKLSRDEIAEKMDKTTWYTAEEALQAGFIDEIANYDS 191 >UniRef50_C9L4D7 ATP-dependent Clp protease proteolytic subunit n=2 Tax=Clostridiales RepID=C9L4D7_RUMHA Length = 416 Score = 132 bits (333), Expect = 5e-30, Method: Composition-based stats. Identities = 33/149 (22%), Positives = 67/149 (44%), Gaps = 4/149 (2%) Query: 61 MLFLEAENPEKDIYLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAG 120 M L A + I + +NS GG + G++I++ ++ + +V+ I G AAS + ++ AG Sbjct: 68 MEDLAAVKDKGHITVKLNSCGGDLYTGIAIHNALKALSGEVNVIVEGIAASAASVIMCAG 127 Query: 121 AKGKRFCLPNSRVMIHQPLGGYQG--QATDIEIHAREILKVKGRMNELMALHTGQSLEQI 178 P S +MIH D++ + + + + E+ TG ++ + Sbjct: 128 --DTVTVYPGSLIMIHGVSVMLWDYMNMQDMKQLMKGMDASERAVAEIYNSKTGIEVDTL 185 Query: 179 ERDTERDRFLSAPEAVEYGLVDSILTHRN 207 ++ + + EA+E G D+I + Sbjct: 186 RSMMTKETWFTGREALEKGFADAIKEDED 214 >UniRef50_A9C2D1 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Delftia acidovorans SPH-1 RepID=A9C2D1_DELAS Length = 345 Score = 132 bits (333), Expect = 6e-30, Method: Composition-based stats. Identities = 45/167 (26%), Positives = 77/167 (46%), Gaps = 8/167 (4%) Query: 42 VIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIYDTMQFIKPD- 100 V+ + ++ A+ + N DI + +N+PGG + AG+ I++ ++ Sbjct: 17 VLAIDDEIGFWGTQ---AKDFRDQLANVAGDIDVELNTPGGDVFAGLGIFNMLRAHAAKG 73 Query: 101 --VSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREILK 158 V+T MG AAS+G+ LL AG KR N+ M H G G A ++ HA + K Sbjct: 74 FQVTTRVMGVAASIGSVLLLAG--DKREMPKNTMAMTHNVASGIWGTADELRDHADTMDK 131 Query: 159 VKGRMNELMALHTGQSLEQIERDTERDRFLSAPEAVEYGLVDSILTH 205 VKG++ + G + +D +++A EA+ G +L Sbjct: 132 VKGQLRGIYVDRLGVDEATADAMLGKDNWMTADEALATGFATDLLAE 178 >UniRef50_A8GLM2 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Serratia proteamaculans 568 RepID=A8GLM2_SERP5 Length = 365 Score = 132 bits (333), Expect = 6e-30, Method: Composition-based stats. Identities = 36/180 (20%), Positives = 77/180 (42%), Gaps = 13/180 (7%) Query: 29 RSFDIYSRLLKE--RVIFLTGQVEDH---MANLIVAQMLFLEAENPEKDIYLYINSPGGV 83 ++I + ++ + + G + + + + Q+ + K+I++ INS GG Sbjct: 8 PWWEIRNATGEDEPTELLIYGYIGEWDDVNSRDVATQLKAV----TSKEIHVKINSYGGS 63 Query: 84 ITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLP-NSRVMIHQPLGGY 142 + +I T++ V+ G + G+R +P N+ +MIH PL Sbjct: 64 VFTAQAILSTLKRHTAAVTVFIDGI---AASAATIIAMAGERVVIPSNAMMMIHNPLTWA 120 Query: 143 QGQATDIEIHAREILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEAVEYGLVDSI 202 G A D +A + +++ + T + E++ + + ++SA EAV+ G D + Sbjct: 121 DGNAADFREYADMLDRIRDSIIAAYQSKTSLTHEKLVELMDAETWMSATEAVDLGFADEV 180 >UniRef50_C7D0Z8 ATP-dependent Clp protease proteolytic subunit n=6 Tax=Enterococcus RepID=C7D0Z8_ENTFA Length = 253 Score = 132 bits (333), Expect = 6e-30, Method: Composition-based stats. Identities = 38/146 (26%), Positives = 66/146 (45%), Gaps = 3/146 (2%) Query: 61 MLFLEAENPEKDIYLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAG 120 +L L N +D+ + INS GG++ G IY ++ + V + A S + + AG Sbjct: 31 VLDLLPANHNEDVEVTINSYGGLVDMGNEIYTALRSYEGHVKVNVV-MAGSAASIIAMAG 89 Query: 121 AKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREILKVKGRMNELMALHTGQSLEQIER 180 P ++MIH G G ++ + + K + TG++ E+I Sbjct: 90 --NTVAISPVGQIMIHNVAMGAGGDYHTMDKASEILQKANNSLANAYVSKTGKAKEEILA 147 Query: 181 DTERDRFLSAPEAVEYGLVDSILTHR 206 +++ +L+A EAVE G VD I+ Sbjct: 148 LMDKETWLTAEEAVENGFVDEIMFEN 173 >UniRef50_A3F644 Head maturation protease n=3 Tax=root RepID=A3F644_9CAUD Length = 268 Score = 132 bits (333), Expect = 6e-30, Method: Composition-based stats. Identities = 36/168 (21%), Positives = 68/168 (40%), Gaps = 5/168 (2%) Query: 42 VIFLTGQVEDHMANLIV---AQMLFLEAENPEKDIYLYINSPGGVITAGMSIYDTMQFIK 98 V+ + Q+ +DI + +NS GG + G IY ++ Sbjct: 10 VVSEGDKWYYDWWEKPCITAKQVHDFLDSAGGEDIQVRLNSGGGEVFVGSEIYSALKDYP 69 Query: 99 PDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREILK 158 +V + G AAS+ + ++ AG P +++MIH G G ++ + + Sbjct: 70 GNVEVVITGLAASIASIIMLAG--DVIKASPMAQIMIHNASWGSYGDYRQLKHDSEVVEN 127 Query: 159 VKGRMNELMALHTGQSLEQIERDTERDRFLSAPEAVEYGLVDSILTHR 206 + + A TG+ +I + + + +A A E GL+D IL + Sbjct: 128 ASISLAGMYARKTGKQETEIRELLDAETWFTANSAKEIGLIDDILYNE 175 >UniRef50_A8SI37 Putative uncharacterized protein n=1 Tax=Parvimonas micra ATCC 33270 RepID=A8SI37_9FIRM Length = 170 Score = 132 bits (332), Expect = 7e-30, Method: Composition-based stats. Identities = 32/125 (25%), Positives = 58/125 (46%), Gaps = 4/125 (3%) Query: 84 ITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQ 143 + G++I + ++ K V+ G AAS+ + + +G F N+ +M+H P Sbjct: 1 MFDGIAIGNMIKQHKAQVNCYIDGVAASIASVIAMSGDA--IFMPSNAMLMVHNPWSFAY 58 Query: 144 GQATDIEIHAREILKVKGRMNELMALHTG--QSLEQIERDTERDRFLSAPEAVEYGLVDS 201 G A+D A + + + + G LE I + + + ++SA EA EYGL D Sbjct: 59 GNASDFRKQADNLDHIADSIKQTYLEKAGDKLDLETITQLMDAETWMSAQEAFEYGLCDQ 118 Query: 202 ILTHR 206 +L+ Sbjct: 119 VLSAN 123 >UniRef50_B2Y1Y4 ATP-dependent Clp protease proteolytic subunit n=2 Tax=Welwitschia mirabilis RepID=B2Y1Y4_WELMI Length = 254 Score = 131 bits (331), Expect = 9e-30, Method: Composition-based stats. Identities = 53/183 (28%), Positives = 94/183 (51%), Gaps = 5/183 (2%) Query: 29 RSFDIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAEN----PEKDIYLYINSPGGVI 84 D+ + +R +F+ G + + +I+A + + + + +++YINS GG Sbjct: 3 DFSDLMDLMTVQRCVFMFGPLTEEGGGVILATLFYYFFNDVAEYRNRPVFVYINSLGGAF 62 Query: 85 TAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQG 144 G++I+DTM IK V TI +G AS G LTAG +G R PNS +M+HQP Sbjct: 63 MMGLTIHDTMILIKERVFTIALGMVASTGTLTLTAGTRGIRHAAPNSLIMLHQPSADLDN 122 Query: 145 Q-ATDIEIHAREILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEAVEYGLVDSIL 203 A++ + E+ +++ +M + A+ TG S + I+ ++ F+S A LVD++ Sbjct: 123 TSASEFVKESEEVNQLRRKMVQSYAIRTGHSEQFIDICLDKPLFMSPRTAWNLNLVDNVF 182 Query: 204 THR 206 + Sbjct: 183 VPK 185 >UniRef50_C4GAS5 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Shuttleworthia satelles DSM 14600 RepID=C4GAS5_9FIRM Length = 224 Score = 131 bits (331), Expect = 1e-29, Method: Composition-based stats. Identities = 37/169 (21%), Positives = 72/169 (42%), Gaps = 7/169 (4%) Query: 39 KERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIYDTMQFIK 98 +E I+ + + ++ Q+ E + + + INS GG + A IY +Q K Sbjct: 23 EEAWIYEYFGEKCTSPSAVLRQL----EEASGEKVDIDINSAGGNVFAASEIYAAIQGYK 78 Query: 99 PDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREILK 158 DV +G AAS + + AG +++M+H G D+ + + + Sbjct: 79 GDVKIHVVGLAASAASMIACAGKSD---ITRTAQMMVHNVSAYTAGDYRDMNHASEVLKQ 135 Query: 159 VKGRMNELMALHTGQSLEQIERDTERDRFLSAPEAVEYGLVDSILTHRN 207 + E +G S + + + +++A +AV+YGL+D I + Sbjct: 136 ANRAIAEAYVAKSGMSEKDALDLMDAETWITAQDAVDYGLIDEIAGESS 184 >UniRef50_A8RU31 ATP-dependent Clp protease proteolytic subunit n=3 Tax=Clostridiales RepID=A8RU31_9CLOT Length = 259 Score = 131 bits (331), Expect = 1e-29, Method: Composition-based stats. Identities = 39/182 (21%), Positives = 78/182 (42%), Gaps = 9/182 (4%) Query: 23 QTSRGERSFDIYSRLLKERVIFLTGQVEDHM------ANLIVAQMLFLEAENPEKDIYLY 76 +T+ + +I + ++ G + + + AE +D+ +Y Sbjct: 16 KTATVKPFCEIKNITDTTADLYFYGDIVSDWWGAWQDEDQYPDAIKNFLAEANGRDLNIY 75 Query: 77 INSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIH 136 INS GG + AG++IY+ ++ + A S+ + L K N+ +MIH Sbjct: 76 INSGGGSVFAGIAIYNMLKRYQGKKHCFVDALAGSIAS-LFPFVDSDKPTIPKNAYLMIH 134 Query: 137 QPLGGYQGQATDIEIHAREILKVKGRMNELMALH--TGQSLEQIERDTERDRFLSAPEAV 194 +P +G A ++ A + ++ + + H G ++EQI+ E + +LS EA Sbjct: 135 KPWCDCEGNANELRKMADTLEAIEAGIWSIYEEHLAEGVTIEQIKELMEAETWLSGEEAA 194 Query: 195 EY 196 +Y Sbjct: 195 KY 196 >UniRef50_C3WAW3 ATP-dependent Clp protease proteolytic subunit n=2 Tax=Fusobacterium RepID=C3WAW3_FUSMR Length = 257 Score = 131 bits (331), Expect = 1e-29, Method: Composition-based stats. Identities = 35/159 (22%), Positives = 70/159 (44%), Gaps = 7/159 (4%) Query: 43 IFLTGQV--EDHMANLIVA-QMLFLEAENPEKDIYLYINSPGGVITAGMSIYDTMQFIKP 99 + + G++ + + + ++ L KD+ ++INS GG + AG++IY ++ + Sbjct: 37 LSIYGEISSDKWWGDEVTPTEIKELLDTVKNKDLNIFINSSGGNVFAGLAIYHMLKRHEG 96 Query: 100 DVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREILKV 159 G AAS+ + + AG + N+ +MIH+ G D+ + K+ Sbjct: 97 KKKVYVDGVAASIASIIAMAG--DEIHIPKNAYLMIHRSWICTAGNKNDLLETISMLEKM 154 Query: 160 KGRMNELMALH--TGQSLEQIERDTERDRFLSAPEAVEY 196 M ++ T S E+I + + +L+ EA Y Sbjct: 155 DINMADIYKTKALTDISNEKILELMDNETWLTGIEAQNY 193 >UniRef50_C6VLG0 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Lactobacillus plantarum JDM1 RepID=C6VLG0_LACPJ Length = 247 Score = 131 bits (330), Expect = 1e-29, Method: Composition-based stats. Identities = 38/165 (23%), Positives = 74/165 (44%), Gaps = 7/165 (4%) Query: 39 KERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIYDTMQFIK 98 ++ I+ +++ ++ + + + + INS GG++ AG IY + + Sbjct: 14 DDKWIYDMLEMDSTAPKDVIDAL-----PDDGSTVEVDINSGGGLMDAGTEIYTALMAYQ 68 Query: 99 PDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREILK 158 V +G AAS + + AG + P ++MIH GG +G D + + + Sbjct: 69 GKVMVNIVGMAASSASLIAMAGNPTRI--SPVGQIMIHNVAGGLRGDYRDQAKLSEILKQ 126 Query: 159 VKGRMNELMALHTGQSLEQIERDTERDRFLSAPEAVEYGLVDSIL 203 + L TG S+E ++ + + +L+A +A E G VD I+ Sbjct: 127 SSEAIANAYHLKTGLSMEDLQAKMDSETYLNADQAKELGFVDEIM 171 >UniRef50_Q1QKR7 ATP-dependent Clp protease proteolytic subunit n=2 Tax=Alphaproteobacteria RepID=Q1QKR7_NITHX Length = 351 Score = 131 bits (330), Expect = 1e-29, Method: Composition-based stats. Identities = 38/164 (23%), Positives = 71/164 (43%), Gaps = 5/164 (3%) Query: 37 LLKERVIFLTGQVEDH-MANLIVAQ--MLFLEAENPEKDIYLYINSPGGVITAGMSIYDT 93 + ++ + L G V + A + L + D+ + +NS GG++ ++IY+ Sbjct: 3 VYQDGELVLYGIVGESFWDEGFTASEVLAALAEHGRDNDLTVRLNSGGGIVNDAIAIYNA 62 Query: 94 MQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHA 153 + K V+ AAS + AG + S +MIH P+ G D E Sbjct: 63 LSTHKGKVTIQVDAIAASAATVIAMAGQ--EIVMRVGSIMMIHDPMNVTFGNIEDHEKTI 120 Query: 154 REILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEAVEYG 197 ++ +M + A +G L+ + D + + +L+A +AVE G Sbjct: 121 EQLTAYANQMASIYAERSGNELDDVRSDMKAEIWLTAEQAVEKG 164 >UniRef50_C7XJ21 ATP-dependent Clp protease, proteolytic subunit n=1 Tax=Lactobacillus crispatus 125-2-CHN RepID=C7XJ21_9LACO Length = 239 Score = 131 bits (329), Expect = 2e-29, Method: Composition-based stats. Identities = 38/164 (23%), Positives = 70/164 (42%), Gaps = 4/164 (2%) Query: 46 TGQVEDHMANLIVAQMLFLEAENPEK--DIYLYINSPGGVITAGMSIYDTMQFIKPDVST 103 TGQ D+ V+ + ++ + + ++ L I S GG + A IY + V+ Sbjct: 18 TGQFFDYWGMQCVSPQMVKDSLDKAQGDEVELDIASYGGDVFAASEIYSMINQYSGKVTG 77 Query: 104 ICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREILKVKGRM 163 + G AAS + A P ++MIH+ G + D A + + Sbjct: 78 VIQGMAASAATIIAEAC--DHLVISPAGQMMIHKASTAGAGNSDDFTHTAGVLNTTDRTI 135 Query: 164 NELMALHTGQSLEQIERDTERDRFLSAPEAVEYGLVDSILTHRN 207 + TG+S E++ +++ +L+A +AVE G D I+ + Sbjct: 136 AGIYQNRTGKSEEEVLNLMKQETYLTAKDAVEQGFADEIMKKSD 179 >UniRef50_Q03FG4 Protease subunit of ATP-dependent Clp protease n=20 Tax=root RepID=Q03FG4_PEDPA Length = 251 Score = 131 bits (329), Expect = 2e-29, Method: Composition-based stats. Identities = 32/137 (23%), Positives = 59/137 (43%), Gaps = 2/137 (1%) Query: 71 KDIYLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPN 130 + + + I S GG + A IY ++ +V+ G AAS + + AG P Sbjct: 51 EALEVDIASNGGDVFAASEIYTMLKNYAGNVTVNIQGLAASAASVIAMAG--DHINISPT 108 Query: 131 SRVMIHQPLGGYQGQATDIEIHAREILKVKGRMNELMALHTGQSLEQIERDTERDRFLSA 190 +++MIH+ G A D+E A + + + TG + + + +L+A Sbjct: 109 AQIMIHKAWSQPAGNADDLEHEASVLNGIDQSIASAYEAKTGMDQADLLQLMANETWLTA 168 Query: 191 PEAVEYGLVDSILTHRN 207 +AV+ G D I+ + Sbjct: 169 SDAVDKGFADEIMFAND 185 >UniRef50_B2V2A3 Peptidase S14, ClpP n=1 Tax=Clostridium botulinum E3 str. Alaska E43 RepID=B2V2A3_CLOBA Length = 377 Score = 130 bits (327), Expect = 3e-29, Method: Composition-based stats. Identities = 42/190 (22%), Positives = 72/190 (37%), Gaps = 17/190 (8%) Query: 29 RSFDIYSRLLKERVIFLTGQVEDH----------MANLIVAQMLFLEAENPEKDIYLYIN 78 R ++ +E + L G+ A+ Q+ + + I + IN Sbjct: 2 RFWNFVETPDEEVELMLYGEFVSQKSWWNDDGQITASDFKEQLDLYKDRDN---ITVRIN 58 Query: 79 SPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQP 138 S GG + +IY ++ K ++ G A S + AG K S MIH P Sbjct: 59 SNGGDVFTASAIYTLLKDCKASITVKIDGMAMSAATVVAMAG--DKVLIPSTSIFMIHDP 116 Query: 139 LGGYQG--QATDIEIHAREILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEAVEY 196 L G G +D+E + VK + T ++ E+IE + +L+ +AV Sbjct: 117 LAGLCGYYNVSDLEKVINRLSVVKNTIINAYINKTDKTKEEIEDLMTNELWLTGEDAVNE 176 Query: 197 GLVDSILTHR 206 G D ++ Sbjct: 177 GFCDEVMFSE 186 >UniRef50_A5ZRV6 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Ruminococcus obeum ATCC 29174 RepID=A5ZRV6_9FIRM Length = 252 Score = 130 bits (326), Expect = 4e-29, Method: Composition-based stats. Identities = 37/175 (21%), Positives = 73/175 (41%), Gaps = 11/175 (6%) Query: 30 SFDIYSRLLKERVIFLTGQVEDHM-----ANLIVAQML--FLEAENPEKDIYLYINSPGG 82 + + +++ G + Q + F+ P ++ +YINS GG Sbjct: 22 FMEFRNVSNNAADLYIYGDIVSSTWEAWCDEDTCPQDISDFMNQIEPGAELTVYINSGGG 81 Query: 83 VITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGY 142 + AG++I+ + + I G AAS+ + +L A +++MIH+PL Sbjct: 82 DVFAGIAIHSILSRHTGHKTGIVDGMAASIASVILMAC--DSIVMSSGAQIMIHKPLSWA 139 Query: 143 QGQATDIEIHAREILKVKGRMNELMALH--TGQSLEQIERDTERDRFLSAPEAVE 195 G A D + E+ K + + ++ G + EQ+ + +++A EA E Sbjct: 140 YGNADDFQRLISELDKCQKSITDIYMGRVKEGVTEEQVTDLINAETWMTAEEAKE 194 >UniRef50_B6FWW7 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Clostridium hiranonis DSM 13275 RepID=B6FWW7_9CLOT Length = 244 Score = 129 bits (324), Expect = 7e-29, Method: Composition-based stats. Identities = 34/179 (18%), Positives = 77/179 (43%), Gaps = 13/179 (7%) Query: 29 RSFDIYSRLLKERVIFLTGQVEDHM------ANLIVAQMLFLEAENPEKDIYLYINSPGG 82 + + + V++ G + + + +KD+ ++INS GG Sbjct: 11 DFLSVKNITNNKAVLYFYGDIVSSWWGAWDDTDQYPESVKNFLNGCEDKDLEIHINSGGG 70 Query: 83 VITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGY 142 + AG++IY+ ++ K + G AAS+ + + AG + S +MIH+P Sbjct: 71 SVFAGITIYNMLKNFKGHKTVYVDGLAASIASVIALAG--DEVVMRTGSSMMIHKPSVYI 128 Query: 143 QG---QATDIEIHAREILKVKGRMNELMAL--HTGQSLEQIERDTERDRFLSAPEAVEY 196 A +++ + + K++ + ++ LE+IE + ++++ EA++Y Sbjct: 129 YNQSLNADELKGMSETLDKLQECIMQIYRENLKDKSKLEEIETMVNAETWMTSEEAMDY 187 >UniRef50_Q5NXH6 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Aromatoleum aromaticum EbN1 RepID=Q5NXH6_AZOSE Length = 421 Score = 129 bits (324), Expect = 7e-29, Method: Composition-based stats. Identities = 35/165 (21%), Positives = 74/165 (44%), Gaps = 7/165 (4%) Query: 42 VIFLTGQVEDHMANLIVAQMLF-LEAENPEKDIYLYINSPGGVITAGMSIYDTMQFIKPD 100 I + G++ D + Q+ + L I + I S GG + G+++++ ++ Sbjct: 75 TIAVRGKIGDWWEGKSIEQIDYDLANIGAVDQITVRITSFGGKLDHGLAMHNALRRHPAR 134 Query: 101 VSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQP-LGGYQGQATDIEIHAREILKV 159 + T+ G AAS G+ + AG + NS +M+H L +G + + R + Sbjct: 135 IITVVEGVAASAGSIVAMAG--DEIHMYANSTMMVHGVTLRDDEGNEVEDDDATRALN-- 190 Query: 160 KGRMNELMALHTGQSLEQIERDTERDRFLSAPEAVEYGLVDSILT 204 + E + TG++ +++ D +++A EA+ G D ++ Sbjct: 191 -ASIVETYSARTGKTADEVAALIATDTWMTAREALAAGFADRVIE 234 >UniRef50_B0NDG2 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Clostridium scindens ATCC 35704 RepID=B0NDG2_EUBSP Length = 275 Score = 128 bits (321), Expect = 1e-28, Method: Composition-based stats. Identities = 37/171 (21%), Positives = 76/171 (44%), Gaps = 14/171 (8%) Query: 43 IFLTGQVEDHMANLI------VAQML--FLEAENPEKDIYLYINSPGGVITAGMSIYDTM 94 ++ G + + Q + FL + +DI +Y NS GG + AG++IY+ + Sbjct: 38 LYFYGDIVSATWESMWFEEDRCPQDIADFLNQLDGYEDIDIYFNSGGGDVFAGLAIYNQL 97 Query: 95 QFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAR 154 + G AAS+ + ++ A + ++ MIH+PL G A D + + Sbjct: 98 KRYSGHKVGYVDGMAASIASVIMFAC--DELHFATGAQAMIHKPLCMAWGNADDFKEVIK 155 Query: 155 EILKVKGRMNELMALH--TGQSLEQIERDTERDRFLSAPEAVEY--GLVDS 201 ++ + + ++ H G + ++I+ ++++ S E EY L+D Sbjct: 156 QLDLCEDSILDVYEEHLKEGVTRDKIKSFMAKEKWFSGAELAEYFDVLIDE 206 >UniRef50_A5BHP1 ATP-dependent Clp protease proteolytic subunit n=5 Tax=core eudicotyledons RepID=A5BHP1_VITVI Length = 429 Score = 127 bits (319), Expect = 2e-28, Method: Composition-based stats. Identities = 58/95 (61%), Positives = 73/95 (76%) Query: 109 AASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREILKVKGRMNELMA 168 SMGAFLL+ G KGKR+ LPNSR+MIHQPLGG QG TDI+I A E+L K +N ++ Sbjct: 319 VGSMGAFLLSCGTKGKRYSLPNSRIMIHQPLGGAQGGQTDIDIQANEMLHHKANLNGYLS 378 Query: 169 LHTGQSLEQIERDTERDRFLSAPEAVEYGLVDSIL 203 HTGQSLE+I +DT+RD F+SA EA EYGL+D ++ Sbjct: 379 YHTGQSLEKINQDTDRDFFMSAKEAKEYGLIDGVI 413 Score = 118 bits (297), Expect = 1e-25, Method: Composition-based stats. Identities = 52/114 (45%), Positives = 75/114 (65%), Gaps = 5/114 (4%) Query: 2 SYSGERDNFAPHMALVPMVIEQTSR-----GERSFDIYSRLLKERVIFLTGQVEDHMANL 56 ++S D P A P + ER + S+L + R+I G V+D MAN+ Sbjct: 67 TWSIRDDLQIPSSAYFPTYAQGGQGPPPMVQERFQSVVSQLFQHRIIRCGGAVDDDMANI 126 Query: 57 IVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAA 110 IVAQ+L+L+A +P+KDI +Y+NSPGG +TAGM+I+DTM+ I+PDVST+C+G AA Sbjct: 127 IVAQLLYLDAVDPDKDIVMYVNSPGGSVTAGMAIFDTMRHIRPDVSTVCVGLAA 180 >UniRef50_Q3SSD7 ATP-dependent Clp protease proteolytic subunit n=3 Tax=Rhizobiales RepID=Q3SSD7_NITWN Length = 281 Score = 126 bits (318), Expect = 3e-28, Method: Composition-based stats. Identities = 37/171 (21%), Positives = 71/171 (41%), Gaps = 13/171 (7%) Query: 39 KERVIFLTGQVEDHM-------ANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIY 91 + I + + + A I A + + ++D+ + INSPGG + G++IY Sbjct: 41 DDATISMYEVIGEDWWSGGGVTAKRISAALRSI----GDRDVTVKINSPGGDMFEGIAIY 96 Query: 92 DTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEI 151 + ++ V+ +G AAS + + AG + + +M+H G G D+ Sbjct: 97 NLLRGHPARVTVEVLGWAASAASIIAMAG--DEIRMGLGTFMMVHNAWGVVIGNRHDMRE 154 Query: 152 HAREILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEAVEYGLVDSI 202 A + ++ TG IE+ + + F+ EAV+ G D + Sbjct: 155 SAELFDGFDSAIVDIYEARTGLKRSAIEKLMDAETFMGPSEAVKNGFADLV 205 >UniRef50_B0MY38 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Alistipes putredinis DSM 17216 RepID=B0MY38_9BACT Length = 335 Score = 126 bits (318), Expect = 4e-28, Method: Composition-based stats. Identities = 36/158 (22%), Positives = 67/158 (42%), Gaps = 5/158 (3%) Query: 52 HMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAAS 111 + L + +I + I S GG + + IY+ + + + T C G AS Sbjct: 80 ATYEKFRDSLDRLREIDA-PEIVVNIRSTGGDVNDALLIYEALSSLDGHIVTRCYGYTAS 138 Query: 112 MGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREILKVKGRMNELMALHT 171 + A ++G R ++ +IH + +G A ++ + K R+ E+ A + Sbjct: 139 AATVIAQAASEGCREISAHALYLIHNSICTAEGNAEELATRIDLLRKTDARLAEVYAARS 198 Query: 172 GQSLEQIERDTERD----RFLSAPEAVEYGLVDSILTH 205 G++ E+ + R+LS EA+ GLVD I+ Sbjct: 199 GRTPEEFTLLMAENNGSGRWLSPQEALAAGLVDRIIEP 236 >UniRef50_D1ZWV1 ATP-dependent Clp protease proteolytic subunit (Fragment) n=1 Tax=Sordaria macrospora RepID=D1ZWV1_SORMA Length = 187 Score = 125 bits (315), Expect = 7e-28, Method: Composition-based stats. Identities = 52/95 (54%), Positives = 66/95 (69%) Query: 112 MGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREILKVKGRMNELMALHT 171 MG+FLL AG G R L N+R+MIHQP GG QG A+DI+I A+EI ++K RMN L +T Sbjct: 1 MGSFLLAAGEPGMRVALTNARIMIHQPSGGAQGMASDIQIQAKEIQRIKDRMNALYVKYT 60 Query: 172 GQSLEQIERDTERDRFLSAPEAVEYGLVDSILTHR 206 G+ LE+IER +RD FL A EA +GLVD + R Sbjct: 61 GKPLEEIERAMDRDTFLEAEEAKAFGLVDQVFDKR 95 >UniRef50_B9K2S2 ATP-dependent Clp protease proteolytic subunit n=2 Tax=Alphaproteobacteria RepID=B9K2S2_AGRVS Length = 284 Score = 125 bits (313), Expect = 1e-27, Method: Composition-based stats. Identities = 36/179 (20%), Positives = 71/179 (39%), Gaps = 11/179 (6%) Query: 24 TSRGERSFDIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGV 83 + GE I+ + ++ + G A + Q+ K++ + +NSPGG Sbjct: 38 DATGENIISIFDVIGED--YWSGGGFTAKRAAAALRQI-------GNKEVIVQVNSPGGD 88 Query: 84 ITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQ 143 + G++IY+ ++ V+ +G A A + A A + S +M+H G Sbjct: 89 MFEGIAIYNMLRAHPGKVTVNVLGWA--ASAASIIAMAADEIVMGLGSFMMVHNAWGAVI 146 Query: 144 GQATDIEIHAREILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEAVEYGLVDSI 202 G D+ + ++ TG + I + + F+S +AV+ G D + Sbjct: 147 GNQHDLRTATDLFAGFDSALADIYEARTGAKRKDIVALMDAETFMSPSDAVKNGFADRV 205 >UniRef50_B4D6M6 Peptidase S14 ClpP n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D6M6_9BACT Length = 439 Score = 125 bits (313), Expect = 1e-27, Method: Composition-based stats. Identities = 42/181 (23%), Positives = 77/181 (42%), Gaps = 8/181 (4%) Query: 29 RSFDIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYIN-SPGGVITAG 87 D +L +R I L G + A+ + +++ + +N + I++ I+ SPGG + AG Sbjct: 193 PVTDDGELVLTDRRIPLNGLISPATADFVCSRIDYFNNKNKDWPIFIVIDDSPGGSVMAG 252 Query: 88 MSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQAT 147 I ++M V + AASM A + T + + PN+ ++ HQ G G T Sbjct: 253 NKILESMHSSTAPVYVVVKTFAASMAATIATLAPRS--YAYPNAVILHHQISNGMMGNLT 310 Query: 148 DIEIHAREILKVKGRMNELMALHTGQSLEQIERDT-----ERDRFLSAPEAVEYGLVDSI 202 + + + + RM +A G S + + D EAV+ +D + Sbjct: 311 EQREGLKNLEQWWKRMATPIAAKMGISTDDFVKQMYTHAASGDWQEFGDEAVKLKWIDMV 370 Query: 203 L 203 + Sbjct: 371 V 371 >UniRef50_D2LX80 Peptidase S14 ClpP n=1 Tax=Bacillus cellulosilyticus DSM 2522 RepID=D2LX80_BACS4 Length = 243 Score = 125 bits (313), Expect = 1e-27, Method: Composition-based stats. Identities = 37/179 (20%), Positives = 79/179 (44%), Gaps = 13/179 (7%) Query: 29 RSFDIYSRLLKERVIFLTGQV-----EDHMANLIVAQ-MLFLEAENPEKDIYLYINSPGG 82 + I + + ++ G + + ++ + + L + K I LY+NS GG Sbjct: 2 KWMKIKNETNESVDFYIYGDIVSDTDWKWDDSDVMPKEIRELLDNHVGKKINLYVNSGGG 61 Query: 83 VITAGMSIYDTMQFIKPD---VSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPL 139 + +G+S+ + ++ + ++ G A S+ + L+ K +C NS +MIH+ Sbjct: 62 SVFSGLSMLNMLKRAREKGSYITAYVDGLAGSIASVLIFGA--NKIYCPSNSYIMIHRAW 119 Query: 140 GGYQGQATDIEIHAREILKVKGRMNELMAL--HTGQSLEQIERDTERDRFLSAPEAVEY 196 G G ATD A ++ K+ + G +E I+ +++ +L+ +A +Y Sbjct: 120 TGMYGNATDFLKMAEDLEKIDEGILNTYKDNLREGVDIETIKEMVDKETWLTGEDASKY 178 >UniRef50_UPI00017450C3 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Verrucomicrobium spinosum DSM 4136 RepID=UPI00017450C3 Length = 462 Score = 124 bits (312), Expect = 2e-27, Method: Composition-based stats. Identities = 41/175 (23%), Positives = 76/175 (43%), Gaps = 8/175 (4%) Query: 37 LLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYIN-SPGGVITAGMSIYDTMQ 95 ++ +R I L G + A+ ++A++ + + + I+L I+ SPGG + AG I MQ Sbjct: 214 VMSDRRIALNGPISMRTADNVIARINYFNNRDAKLPIFLVIDDSPGGSVMAGYKIVKAMQ 273 Query: 96 FIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHARE 155 + V + AASM A + T + N+ ++ HQ G T + +E Sbjct: 274 GSQAPVHVVVKSFAASMAACIATVAK--HSYAYSNTVILHHQIHSFAGGNLTQQQEWLKE 331 Query: 156 ILKVKGRMNELMALHTGQSLEQIERDT-----ERDRFLSAPEAVEYGLVDSILTH 205 + + R+ + +A+ G S E++ + D A + VD I+ Sbjct: 332 MEEWWRRLADPVAVKMGISREELIKQMYAHASSGDWSEFGDNAQKLKWVDHIVDE 386 >UniRef50_C0A810 Peptidase S14 ClpP n=1 Tax=Opitutaceae bacterium TAV2 RepID=C0A810_9BACT Length = 478 Score = 123 bits (310), Expect = 3e-27, Method: Composition-based stats. Identities = 45/176 (25%), Positives = 74/176 (42%), Gaps = 8/176 (4%) Query: 38 LKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYIN-SPGGVITAGMSIYDTMQF 96 + +R I L G + A+ I ++ + +N E I++ I+ SPGG + AG I M+ Sbjct: 242 ISDRRIPLNGPISMRTADRIQERIDYFNNQNTEYPIFIVIDASPGGSVMAGYKILKAMEG 301 Query: 97 IKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREI 156 V T+ AASM A + T + + PN+ ++ HQ G T+ RE+ Sbjct: 302 SAAPVYTVVKSFAASMAAGITTLSKQS--YAYPNAILLHHQIWTSSGGNLTEQREGVREL 359 Query: 157 LKVKGRMNELMALHTGQSLEQIERDT-----ERDRFLSAPEAVEYGLVDSILTHRN 207 + R+ +A G LE + D +A + VD I+T Sbjct: 360 EEWWRRLAAPIAAKMGIGLEDFIKQMYANRSTGDWIAFGDKARDLKWVDHIVTTIR 415 >UniRef50_A5TX35 Endopeptidase Clp n=1 Tax=Fusobacterium nucleatum subsp. polymorphum ATCC 10953 RepID=A5TX35_FUSNP Length = 236 Score = 123 bits (309), Expect = 3e-27, Method: Composition-based stats. Identities = 31/167 (18%), Positives = 64/167 (38%), Gaps = 15/167 (8%) Query: 43 IFLTGQVEDHMANLIVAQMLFLEA-----------ENPEKDIYLYINSPGGVITAGMSIY 91 I++ G + N + LE +++++INS GG + AG++I Sbjct: 17 IYINGDIVSDSDNDGFYEFFDLENPNVYPLDVANALKEAGEVHVHINSYGGDVFAGVAIS 76 Query: 92 DTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEI 151 + ++ K G +AS + + + N+ +MIH+ G G A D Sbjct: 77 NMLKNHKGKTIAYVDGLSASSASIIAFGCK--EIVIPDNAYLMIHRVSCGMFGNADDFLK 134 Query: 152 HAREILKVKGRMNELMALHT--GQSLEQIERDTERDRFLSAPEAVEY 196 + K++ + G + EQI + + + + + + Y Sbjct: 135 QIEVMEKIEDGIINTYMEKAIEGVTREQIYDLMKSETWFTGKDCLNY 181 >UniRef50_Q6J1Y3 Putative ClpP-like protease n=1 Tax=Lactobacillus phage phiAT3 RepID=Q6J1Y3_9CAUD Length = 228 Score = 123 bits (309), Expect = 4e-27, Method: Composition-based stats. Identities = 28/136 (20%), Positives = 58/136 (42%), Gaps = 2/136 (1%) Query: 69 PEKDIYLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCL 128 D+ L I S GG + I + ++ + +V+ M A S + + K Sbjct: 39 DGSDVTLEITSNGGEVDPATEICNALRSYQGNVTAKVMSNAYSAASIVAMGA--NKVQMA 96 Query: 129 PNSRVMIHQPLGGYQGQATDIEIHAREILKVKGRMNELMALHTGQSLEQIERDTERDRFL 188 P +++MIH+ G + +++ + + + L + TG+ + +++ +L Sbjct: 97 PGAKMMIHRASSDASGNSHEMDAASGMLQTTDSAIASLYSAKTGKPADDFLALMDKETWL 156 Query: 189 SAPEAVEYGLVDSILT 204 A +A+E GL D L Sbjct: 157 DADQAIELGLADEKLD 172 >UniRef50_A8W9Z5 Gp7 n=1 Tax=Mycobacterium phage Giles RepID=A8W9Z5_9CAUD Length = 396 Score = 123 bits (309), Expect = 4e-27, Method: Composition-based stats. Identities = 37/163 (22%), Positives = 64/163 (39%), Gaps = 5/163 (3%) Query: 43 IFLTGQVEDH-MANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIYDTMQFIKPDV 101 I++ G + + + AQ + + + +NSPGG GM+I + + Sbjct: 19 IYIYGDIGQTFWDDGVSAQSFIDQLAEVSGPVNIRVNSPGGSAWDGMAIANAIIRHPAKT 78 Query: 102 STICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREILKVKG 161 +T G AAS + + AG + R M+H G A D+ A ++ + Sbjct: 79 TTFIDGLAASAASIVAFAG--DEVVVSKWGRAMLHNAHAMVMGTADDMREVATQLDALNA 136 Query: 162 RMNELMALHT--GQSLEQIERDTERDRFLSAPEAVEYGLVDSI 202 M A + G + ++ + SA E +E GLV I Sbjct: 137 NMAAYYADRSTGGDDAKAFAAAMAKETWYSADELLEAGLVTRI 179 Database: uniref50.fasta Posted date: Mar 8, 2010 10:38 AM Number of letters in database: 1,040,396,356 Number of sequences in database: 3,077,464 Lambda K H 0.310 0.145 0.374 Lambda K H 0.267 0.0442 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 1,254,504,600 Number of Sequences: 3077464 Number of extensions: 51024775 Number of successful extensions: 163179 Number of sequences better than 1.0e-01: 250 Number of HSP's better than 0.1 without gapping: 1097 Number of HSP's successfully gapped in prelim test: 859 Number of HSP's that attempted gapping in prelim test: 159968 Number of HSP's gapped (non-prelim): 2270 length of query: 207 length of database: 1,040,396,356 effective HSP length: 123 effective length of query: 84 effective length of database: 661,868,284 effective search space: 55596935856 effective search space used: 55596935856 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.1 bits) S2: 90 (39.2 bits)