74 d2hoxa1 Probab=100.00  E-value=3.8e-42  Score=281.16  Aligned_columns=320  Identities=16%

Q ss_pred             EEEECCCCCCCCCCCCCCHHHHHHHHHHH--------CCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCEEEEEE
Q ss_conf             67041642179998987758999999986--------0862247889899989999999998762788778000789970
Q batch____        29 INLGIGVYKDETGKTPVLTSVKKAEQYLL--------ENETTKNYLGIDGIPEFGRCTQELLFGKGSALINDKRARTAQT  100 (396)
Q Consensus        29 i~l~~G~~~~~~~~p~~~~~v~~a~~~~~--------~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~~~i~~T  100 (396)
                      +|+..|       +|..++..-.......        ............+.++|++.|++......+...++..+  ++|
T Consensus        59 ~~~~~g-------dp~~~~~~~~~~~~~~a~~~~~~~~~~y~~~~~~~~~~~~L~~~i~~l~~~~g~~~~~~~~i--v~t  129 (425)
T d2hoxa1          59 ADVASG-------DGLFLEEYWKQHKEASAVLVSPWHRMSYFFNPVSNFISFELEKTIKELHEVVGNAAAKDRYI--VFG  129 (425)
T ss_dssp             EECCSC-------CCGGGHHHHTTSHHHHCCCCCTTTTCSSSCSSCCTTCCHHHHHHHHHHHHHHTCBCCTTCEE--EEE
T ss_pred             CCCCCC-------CCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCEE--EEE
T ss_conf             346678-------85546366411421000112455545654566434452899999999988508867887769--994


Q ss_pred             CCHHHHHHHHHHHHHHCCCCCE--------EEEECCCCCCHHHHHHHCCCCEEEEEEECCCCCCCCCHHHHHHHHHCCCC
Q ss_conf             5626999999999864089979--------99958987536899985278779998102788730405768877517888
Q batch____       101 PGGTGALRVAADFLAKNTSVKR--------VWVSNPSWPNHKSVFNSAGLEVREYAYYDAENHTLDFDALINSLNEAQAG  172 (396)
Q Consensus       101 ~G~~~al~l~~~~~~~~~~gd~--------Vli~~P~y~~~~~~~~~~g~~~v~v~~~~~~~~~~d~~~~~~~~~~~~~~  172 (396)
                      +|+++++.+++..+  ..|||.        |+++.|+|+.|...++..|.+...++.+.+           .......++
T Consensus       130 ~G~~~~l~~a~~aL--~~pGd~v~~~~p~~v~~~~p~y~~~~~~~~~~~~~~~~~~~d~~-----------~~~~~~~~~  196 (425)
T d2hoxa1         130 VGVTQLIHGLVISL--SPNMTATPDAPESKVVAHAPFYPVFREQTKYFDKKGYVWAGNAA-----------NYVNVSNPE  196 (425)
T ss_dssp             SHHHHHHHHHHHHH--SCCTTTCTTSCCEEEEECSSCCHHHHHHHHHSCCTTEEEEEEGG-----------GGTTCSCGG
T ss_pred             CCHHHHHHHHHHHH--CCCCCCCCCCCCCEEEECCHHHHHHHHHHHHCCCCCCCCCCCHH-----------HHHHHCCCC
T ss_conf             68899999999986--48886123567743573002377899999855997444247988-----------999724888


Q ss_pred             CEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEECCCHHHCCCCCCCCHHHHHHHCCCCCEEEEEECCCCCCCCC
Q ss_conf             18999668998774665899999999999877988999677101013776654356763104897899972741126660
Q batch____       173 DVVLFHGCCHNPTGIDPTLEQWQTLAQLSVEKGWLPLFDFAYQGFARGLEEDAEGLRAFAAMHKELIVASSYSKNFGLYN  252 (396)
Q Consensus       173 ~~~i~~~~p~NPTG~~~s~~~~~~i~~~a~~~~~~ii~DeaY~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G  252 (396)
                      ++++++++||||||.+++          |.++++++|+||+|.++.+.+         .....+++|+++||||.||++|
T Consensus       197 ~~~~~i~~P~NPtG~v~~----------a~~~~~~~i~De~y~~~~~~~---------~~~~~~~~i~~~S~SK~~g~~G  257 (425)
T d2hoxa1         197 QYIEMVTSPNNPEGLLRH----------AVIKGCKSIYDMVYYWPHYTP---------IKYKADEDILLFTMSKFTGHSG  257 (425)
T ss_dssp             GEEEEEESSCTTTCCCCC----------CSSTTCEEEEECTTCSTTTSC---------CCSCBCCSEEEEEHHHHTSCGG
T ss_pred             CEEEEECCCCCCCCEEEE----------EEECCCEEEEECCCCCCCCCC---------CCCCCCCEEEEEECCCCCCCCC
T ss_conf             579998178888560654----------232396899714323433233---------3345685499981551012332


Q ss_pred             CCEEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCHHHHH-----HHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             00068984478789999999999865321346407999999999982974579-----8999999999999999999999
Q batch____       253 ERVGACTLVAADSETVDRAFSQMKAAIRANYSNPPAHGASVVATILSNDALRA-----IWEQELTDMRQRIQRMRQLFVN  327 (396)
Q Consensus       253 ~RiG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~a~~~l~~~~~~~-----~~~~~~~~~~~~~~~~r~~l~~  327 (396)
                      +|+||++++.+      .+...+......+..+++...|.++..+|++.....     ..++++..+++.+++|++.+.+
T Consensus       258 lRiG~~i~~~~------~i~~~l~~~~~~~~~~~s~~~Q~aA~~~L~~~~~~~~~~~~~~~~~~~~~r~~l~~r~~~l~~  331 (425)
T d2hoxa1         258 SRFGWALIKDE------SVYNNLLNYMTKNTEGTPRETQLRSLKVLKEVVAMVKTQKGTMRDLNTFGFKKLRERWVNITA  331 (425)
T ss_dssp             GCCEEEEECCH------HHHHHHHHHHHHHTSSCCHHHHHHHHHHHHHHHHHHHHHTTSTTSHHHHHHHHHHHHHHHHHH
T ss_pred             CCEEEEEECCH------HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             31018996898------999999986410577736899999999960201345655554899999999999999999999


Q ss_pred             HHHHCCC-----------CCCEEEEECCCCEEEECCC---CHHHHHHHHHHCCEEEECCC---------EEEEECCCHHH
Q ss_conf             9997299-----------8880896059840886399---98999999983892991881---------49860689889
Q batch____       328 TLQEKGA-----------NRDFSFIIKQNGMFSFSGL---TKEQVLRLREEFGVYAVASG---------RVNVAGMTPDN  384 (396)
Q Consensus       328 ~L~~~g~-----------~~~~~~~~~~~g~f~~~~l---~~~~~~~l~~e~~I~~~pg~---------Ris~a~~~~e~  384 (396)
                      .|.+.+.           ...+..+.+.+++|+|+.+   +++++..+++++||.+.||.         |||++ .++|+
T Consensus       332 ~L~~~~~~~l~~~p~~~~~~~~~~~~~~~~~f~w~~~~~~~~~~~~~lL~e~GI~v~pGs~FG~~~~~vRiSl~-~~~e~  410 (425)
T d2hoxa1         332 LLDQSDRFSYQELPQSEYCNYFRRMRPPSPSYAWVKCEWEEDKDCYQTFQNGRINTQNGVGFEASSRYVRLSLI-KTQDD  410 (425)
T ss_dssp             HHTTSSSEECCCCCSCEEETTTTEEECCCCSEEEEEECSGGGCSHHHHHHHTTEECEEGGGGTSCTTEEEEECS-SCHHH
T ss_pred             HHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHCCEEEECCCCCCCCCCEEEEEEC-CCHHH
T ss_conf             98635763003456554322100137787616998678980899999999669499717023898865999913-99899


Q ss_pred             HHHHHHHHHHHC
Q ss_conf             999999989829
Q batch____       385 MAPLCEAIVAVL  396 (396)
Q Consensus       385 i~~l~~aI~~vl  396 (396)
                      ++.+.++|++.|
T Consensus       411 ld~~l~rL~~~v  422 (425)
T d2hoxa1         411 FDQLMYYLKDMV  422 (425)
T ss_dssp             HHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHH
T ss_conf             999999999987


