Phyre 2 alignment of Q9JMT6 with d2icya1

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Job Description | Q9JMT6
Confidence | 30.03% | Date | Thu Jan 5 12:38:11 GMT 2012
Rank | 9 | Aligned Residues | 41
% Identity | 22% | Template | d2icya1
SCOP info | Single-stranded left-handed beta-helix | Trimeric LpxA-like enzymes | GlmU C-terminal domain-like
Resolution | 1.64

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 77 | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | T | S | F | V | G | D | I | S | S | G | E | K | I | I | I | H | G | K | I | N | G | N | I | N | T | N | N | G | V | V | F | I | D | K | G | G | V | V | N | G | R | V
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | L | K | V | S | G | D | V | W | F | G | S | S | I | V | L | K | G | K | V | T | V | A | A | K | S | G | V | . | K | L | E | I | P | D | R | A | V | V | E | N | K | N
Template Known Secondary structure |  |  |  |  |  | S |  |  |  |  |  | S | S |  |  |  |  |  |  |  |  |  |  |  |  | T | T |  | . |  |  |  |  |  | T | T |  |  |  |  | S |  |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 422 | . | . | . | . | . | . | . | 430 | . | . | . | . | . | . | . | . | . | 440 | . | . | . | . | . | . | . | . |  | . | 450 | . | . | . | . | . | . | . | . | . | 460 | . | .

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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