18/01/2012 23:53:47 : INFO  : Run start: Wed Jan 18 23:53:46 GMT 2012
18/01/2012 23:53:51 : INFO  : Initialised job
18/01/2012 23:53:52 : INFO  : Renaming log file 'phyre2_20120118_235346.log' to '/bmm/www/servers/phyre2/public_html/phyre2_output/eed8780467a22cdd/phyre_20120118_235346.log'
18/01/2012 23:53:53 : INFO  : Initialised job:
Sequence
>batch____
MTINDSAISEQGMCEEEQVARIAWFYYHDGLTQSEISDRLGLTRLKVSRLLEKGHQSGII
RVQINSRFEGCLEYETQLRRQFSLQHVRVIPGLADADVGGRLGIGAAHMLMSLLQPQQML
AIGFGEATMNTLQRLSGFISSQQIRLVTLSGGVGSYMTGIGQLNAACSVNIIPAPLRASS
ADIARTLKNENCVKDVLLAAQAADVAIVGIGAVSQQDDATIIRSGYISQGEQLMIGRKGA
VGDILGYFFDAKGDVVTNIKIHNELIGLPLSALKTIPVRVGVAGGENKAEAIAAAMKGGY
INALVTDQDTAAAILRS

18/01/2012 23:53:54 : INFO  : Checked sequence
18/01/2012 23:53:56 : INFO  : Finding homologues with PSI-BLAST
18/01/2012 23:53:57 : INFO  : PSI-BLAST 3 iterations
18/01/2012 23:56:32 : INFO  : PSI-BLAST 5 iterations
18/01/2012 23:59:08 : INFO  : Finished PSI-BLAST
18/01/2012 23:59:09 : INFO  : Running Buildali to generate a3m file
19/01/2012 00:06:48 : INFO  : Converting to HMM
19/01/2012 00:06:49 : INFO  : Calibrating HMM
19/01/2012 00:07:02 : INFO  : Searching HMM database
19/01/2012 00:14:15 : INFO  : Finished buildali
19/01/2012 00:14:16 : INFO  : Predicting secondary structure
19/01/2012 00:14:20 : INFO  : Predicted secondary structure (PSI-Pred)
19/01/2012 00:14:21 : INFO  : Predicting Disordered regions
19/01/2012 00:14:23 : INFO  : Predicted Disorder (Disopred)
19/01/2012 00:14:24 : INFO  : Running memsat_svm check
19/01/2012 00:17:17 : INFO  : Globular protein
19/01/2012 00:17:18 : INFO  : Predicted Transmembrane (memsat_svm) ID 'eed8780467a22cdd'
19/01/2012 00:17:19 : INFO  : Initialising fold library search
19/01/2012 00:17:20 : INFO  : Initialised search input
19/01/2012 00:17:21 : INFO  : Building Ensemble models
19/01/2012 00:17:23 : INFO  : Building hh.c2w48D_.model.1.pdb
19/01/2012 00:17:32 : INFO  : Building hh.c2elhA_.model.2.pdb
19/01/2012 00:17:39 : INFO  : cpying /bmm/www/servers/phyre2/public_html/phyre2_output/eed8780467a22cdd/hh.c2elhA_.model.2.pdb to /bmm/www/servers/phyre2/public_html/phyre2_output/eed8780467a22cdd/c2elhA_.108.pdb
19/01/2012 00:17:42 : INFO  : Building c2w48D_.1.pdb
19/01/2012 00:17:52 : INFO  : Building c3kv1A_.2.pdb
19/01/2012 00:18:02 : INFO  : Building c3nzeB_.3.pdb
19/01/2012 00:18:13 : INFO  : Building d2gnpa1.4.pdb
19/01/2012 00:18:23 : INFO  : Building d3efba1.5.pdb
19/01/2012 00:18:32 : INFO  : Building d2okga1.6.pdb
19/01/2012 00:18:41 : INFO  : Building c2o0mA_.7.pdb
19/01/2012 00:18:51 : INFO  : Building d2o0ma1.8.pdb
19/01/2012 00:19:00 : INFO  : Building d2r5fa1.9.pdb
19/01/2012 00:19:14 : INFO  : Building c2bkxB_.10.pdb
19/01/2012 00:19:26 : INFO  : Building c2ri0B_.11.pdb
19/01/2012 00:19:35 : INFO  : Building d1ne7a_.12.pdb
19/01/2012 00:19:44 : INFO  : Building c3hn6D_.13.pdb
19/01/2012 00:19:54 : INFO  : Building d1fsfa_.14.pdb
19/01/2012 00:20:03 : INFO  : Building c3e15D_.15.pdb
19/01/2012 00:20:12 : INFO  : Building c2j0eA_.16.pdb
19/01/2012 00:20:22 : INFO  : Building c3nwpA_.17.pdb
19/01/2012 00:20:33 : INFO  : Building c3lwdA_.18.pdb
19/01/2012 00:20:41 : INFO  : Building c3icoA_.19.pdb
19/01/2012 00:20:50 : INFO  : Building c3cssA_.20.pdb
19/01/2012 00:21:22 : INFO  : Finished HH model building
19/01/2012 00:21:24 : WARN  : Set python to /bmm/www/servers/phyre2/bin//newpython/python2.6
19/01/2012 00:22:05 : INFO  : html domain output complete ID 'eed8780467a22cdd'
19/01/2012 01:43:36 : INFO  : Run end  : Thu Jan 19 01:43:35 GMT 2012
