Phyre 2 alignment of P76141 with d1hlva1

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Job Description | P76141
Confidence | 95.91% | Date | Thu Jan 5 12:19:32 GMT 2012
Rank | 162 | Aligned Residues | 31
% Identity | 19% | Template | d1hlva1
SCOP info | DNA/RNA-binding 3-helical bundle | Homeodomain-like | Centromere-binding
Resolution | 2.50

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

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Predicted Secondary structure |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
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Query Sequence |  | Y | Y | H | D | G | . | . | L | T | Q | S | E | I | S | D | R | L | G | L | T | R | L | K | V | S | R | L | L | E | K | G | H | Q
Query Conservation |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | E | V | E | E | N | P | D | L | R | K | G | E | I | A | R | R | F | N | I | P | P | S | T | L | S | T | I | L | K | N | K | R | A
Template Known Secondary structure |  |  |  |  |  |  | T | T | S |  |  |  |  |  |  |  |  |  | T |  |  |  |  |  |  |  |  |  |  |  | T |  |  |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
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Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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