Phyre 2 alignment of P76141 with c2pijB_

Return to main results | Retrieve Phyre Job Id

Job Description | P76141
Confidence | 43.20% | Date | Thu Jan 5 12:19:32 GMT 2012
Rank | 477 | Aligned Residues | 30
% Identity | 27% | Template | c2pijB_
PDB info | PDB header:transcription | Chain: B: PDB Molecule:prophage pfl 6 cro; | PDBTitle: structure of the cro protein from prophage pfl 6 in pseudomonas2 fluorescens pf-5
Resolution | 1.70 Å

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 27 | . | . | 30 | . | . |  | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | .
Predicted Secondary structure |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | Y | H | D | G | L | T | . | Q | S | E | I | S | D | R | L | G | L | T | R | L | K | V | S | R | L | L | E | K | G | H | Q
Query Conservation |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | Y | L | E | E | H | G | T | Q | S | A | L | A | A | A | L | G | V | N | Q | S | A | I | S | Q | X | V | R | A | G | R | S
Template Known Secondary structure |  |  |  |  |  | T |  |  |  |  |  |  |  |  |  |  | T |  |  |  |  |  |  |  |  |  |  |  | T | T |  |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 9 | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys |
Disclaimer
Terms and Conditions