Phyre 2 alignment of P76141 with d1aoya_

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Job Description | P76141
Confidence | 76.17% | Date | Thu Jan 5 12:19:32 GMT 2012
Rank | 384 | Aligned Residues | 29
% Identity | 38% | Template | d1aoya_
SCOP info | DNA/RNA-binding 3-helical bundle | "Winged helix" DNA-binding domain | Arginine repressor (ArgR), N-terminal DNA-binding domain
Resolution | UNK

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 32 | . | . | . | . | . | . | . | 40 |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | T | Q | S | E | I | S | D | R | L | . | . | . | . | . | . | G | L | T | R | L | K | V | S | R | L | L | E | K | G | H | Q | S | G | I | I | R | V | Q
Query Conservation |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  | . | . | . |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . |  |  |  |  |  |  |  |  |
Template Sequence |  | S | Q | G | E | I | V | A | A | L | Q | E | Q | G | F | D | N | I | N | Q | S | K | V | S | R | M | L | . | . | . | T | K | F | G | A | V | R | T | R
Template Known Secondary structure |  | S |  |  |  |  |  |  |  |  |  |  |  | T |  | S | S |  |  |  |  |  |  |  |  |  |  | . | . | . |  |  |  | T |  |  |  |  |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 25 | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 |  |  |  | . | . | . | . | . | . | . | . | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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